BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017510
(370 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|449441244|ref|XP_004138392.1| PREDICTED: transcription elongation factor A protein 3-like
[Cucumis sativus]
Length = 369
Score = 258 bits (659), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 162/376 (43%), Positives = 234/376 (62%), Gaps = 26/376 (6%)
Query: 1 MEKEVMELCEAAKRRAETAA--SAEGELEEAQCIAALDQLHKSSITCQLLVSTQLVRHLL 58
ME E++EL EAAK+ A+ AA S +G EE++C+ AL QL K +T Q+LVSTQ+ + L
Sbjct: 1 MENELVELFEAAKKAADAAAAPSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR 60
Query: 59 PLTKHPRQKIQDTASELILSWRSLFLEQMKGDEENG--SFAICGEIKSANVEIAKGKRQI 116
LTKHP++KIQ+ AS+LI W+ + +++ +++NG S +I S + E K ++
Sbjct: 61 HLTKHPKKKIQEHASDLIEMWKEIVIKETNKNKKNGNASSKDSPKIGSPSAESVKVEKFQ 120
Query: 117 TSDEFEQALDVE-VVKVRRVDQKGAPRSKKLVGSEFIVTE-------ETNSLDNVDAEAI 168
S ++ VE V KV + D+ GA S K SE +V+E +T+S+ V+
Sbjct: 121 KS----SSMKVERVSKVEQFDRNGATSSVKYSKSESVVSERNSVKVEKTDSMVKVERVVK 176
Query: 169 REEKPAS-AVVPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRV 227
E+KP+S A P KL SMIK D R++IRE L++A SKV GE DEE D++N DPIRV
Sbjct: 177 EEKKPSSGAAAPPKLTSMIKSKDAARDKIRELLFEAFSKVPGEADEEFMDEVNASDPIRV 236
Query: 228 AITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEM 287
A++ ES+MFE WG S G + KYRSI+FNL DP+NPDFRRKVLLG +KPE +I MS+ +M
Sbjct: 237 AVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMINMSTADM 296
Query: 288 VSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSS-- 345
SD +R N++I ++ D +GG P + ++ CGRCG +KTT + S+
Sbjct: 297 ASDQRKRENEEIAQKALFDCE---RGG--APKATTDQFKCGRCGQRKTTYYQLQTRSADE 351
Query: 346 --AKRIKCLNCYQYWE 359
+ C+NC +W+
Sbjct: 352 PMTTFVTCVNCNNHWK 367
>gi|356509090|ref|XP_003523285.1| PREDICTED: putative transcription elongation factor S-II-like
[Glycine max]
Length = 368
Score = 244 bits (624), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 160/378 (42%), Positives = 239/378 (63%), Gaps = 31/378 (8%)
Query: 1 MEKEVMELCEAAKRRAETAASAEGELEEAQCIAALDQLHKSSITCQLLVSTQLVRHLLPL 60
MEKE++EL EAAK+ A+ A S +G+ EE++CI AL+QL K + ++LV+TQ+ +HL L
Sbjct: 1 MEKELVELYEAAKKAADAAISGDGKHEESRCIDALEQLKKFPVNYKILVNTQVGKHLKVL 60
Query: 61 TKHPRQKIQDTASELILSWRSLFLEQMKGDEENGSFAICGEIKSANVEIAK-GKRQIT-S 118
TKHPR KI+ A +LI W+ + +++ ++ GS + +++SAN E +K GK Q + S
Sbjct: 61 TKHPRLKIKAFAIDLIEIWKGIIIKETSKNKNGGSDS---KVESANGEKSKAGKMQKSPS 117
Query: 119 DEFEQALDVEVVKVRRVDQKGAPRSK----KLVGSEFIVTEETNSLDNVDAEAI-REEKP 173
+ E+ E VKV ++D+ G +S K V ++ + E+T+ +V E I +EEKP
Sbjct: 118 VKVEKG---ETVKVEKIDRNGTTKSSSENMKKVQND-VKNEKTDRSASVKVEKIAKEEKP 173
Query: 174 --------ASAVVPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPI 225
+S+ P KL +MIK ND R++IRE L++ALSKV+GE DE++ D +N DPI
Sbjct: 174 VSGAKKMSSSSAAPPKLKTMIKSNDATRDKIREILHEALSKVTGEADEDLVDVVNNSDPI 233
Query: 226 RVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSE 285
RVA+T ES++FEKWG S G +VKYRS++FNL D NPDFRRKVLLG ++PE LI MS+
Sbjct: 234 RVAVTVESVLFEKWGPSNGAQKVKYRSLMFNLKDSNNPDFRRKVLLGVIEPEQLINMSTA 293
Query: 286 EMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSS 345
EM S+ ++ Q+I E+A + +GG P + ++ CGRCG +KTT + S+
Sbjct: 294 EMASEQRKQEYQKI-TEKA--LFECERGG--PPKATTDQFKCGRCGQRKTTYYQMQTRSA 348
Query: 346 ----AKRIKCLNCYQYWE 359
+ C+ C W+
Sbjct: 349 DEPMTTYVTCVVCNNRWK 366
>gi|255637690|gb|ACU19168.1| unknown [Glycine max]
Length = 368
Score = 243 bits (621), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 159/378 (42%), Positives = 238/378 (62%), Gaps = 31/378 (8%)
Query: 1 MEKEVMELCEAAKRRAETAASAEGELEEAQCIAALDQLHKSSITCQLLVSTQLVRHLLPL 60
MEKE++EL EAAK+ A+ A S +G+ EE++CI A +QL K + ++LV+TQ+ +HL L
Sbjct: 1 MEKELVELYEAAKKAADAAISGDGKHEESRCIDAFEQLKKFPVNYKILVNTQVGKHLKVL 60
Query: 61 TKHPRQKIQDTASELILSWRSLFLEQMKGDEENGSFAICGEIKSANVEIAK-GKRQIT-S 118
TKHPR KI+ A +LI W+ + +++ ++ GS + +++SAN E +K GK Q + S
Sbjct: 61 TKHPRLKIKAFAIDLIEIWKGIIIKETSKNKNGGSDS---KVESANGEKSKAGKMQKSPS 117
Query: 119 DEFEQALDVEVVKVRRVDQKGAPRSK----KLVGSEFIVTEETNSLDNVDAEAI-REEKP 173
+ E+ E VKV ++D+ G +S K V ++ + E+T+ +V E I +EEKP
Sbjct: 118 VKVEKG---ETVKVEKIDRNGTTKSSSENMKKVQND-VKNEKTDRSASVKVEKIAKEEKP 173
Query: 174 --------ASAVVPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPI 225
+S+ P KL +MIK ND R++IRE L++ALSKV+GE DE++ D +N DPI
Sbjct: 174 VSGAKKMSSSSAAPPKLKTMIKSNDATRDKIREILHEALSKVTGEADEDLVDVVNNSDPI 233
Query: 226 RVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSE 285
RVA+T ES++FEKWG S G +VKYRS++FNL D NPDFRRKVLLG ++PE LI MS+
Sbjct: 234 RVAVTVESVLFEKWGPSNGAQKVKYRSLMFNLKDSNNPDFRRKVLLGVIEPEQLINMSTA 293
Query: 286 EMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSS 345
EM S+ ++ Q+I E+A + +GG P + ++ CGRCG +KTT + S+
Sbjct: 294 EMASEQRKQEYQKI-TEKA--LFECERGG--PPKATTDQFKCGRCGQRKTTYYQMQTRSA 348
Query: 346 ----AKRIKCLNCYQYWE 359
+ C+ C W+
Sbjct: 349 DEPMTTHVTCVVCNNRWK 366
>gi|356516223|ref|XP_003526795.1| PREDICTED: transcription elongation factor A protein 2-like
[Glycine max]
Length = 367
Score = 241 bits (614), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 160/377 (42%), Positives = 234/377 (62%), Gaps = 30/377 (7%)
Query: 1 MEKEVMELCEAAKRRAETAASAEGELEEAQCIAALDQLHKSSITCQLLVSTQLVRHLLPL 60
MEKE++EL EAAK+ A+ A S +GE EE++CI AL+QL K + ++LV+TQ+ +HL L
Sbjct: 1 MEKELVELYEAAKKAADAAISGDGEHEESRCIDALEQLKKFPVNYKILVNTQVGKHLKVL 60
Query: 61 TKHPRQKIQDTASELILSWRSLFLEQMKGDEENGSFAICGEIKSANVEIAK-GKRQIT-S 118
TKHPRQKI+ A +LI W+ + +++ ++ GS + + +SAN E +K GK Q + S
Sbjct: 61 TKHPRQKIKSFAIDLIEIWKGIIIKETSKNKNGGSDS---KDESANREKSKAGKMQKSPS 117
Query: 119 DEFEQALDVEVVKVRRVDQKGAPRSK----KLVGSEFIVTEETNSLDNVDAEAIREEKP- 173
+ E+ E VKV ++++ G +S K V ++ + E T+ +V E I EEKP
Sbjct: 118 VKIEKG---ETVKVEKIERNGTSKSSFENMKKVQND-VKNERTDRAASVKMEKIAEEKPI 173
Query: 174 -------ASAVVPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIR 226
+S+ P KL +MIK ND R++IRE L++ALSKV+ E DE++ +N DPIR
Sbjct: 174 SGAKKMSSSSTAPPKLKTMIKSNDATRDKIREILHEALSKVTREADEDLVAVVNDSDPIR 233
Query: 227 VAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEE 286
VA+T ES++FEKWG S G +VKYRS++FNL D NPDFRRKVLLG V+PE LI MS+ E
Sbjct: 234 VAVTVESVLFEKWGPSNGAQKVKYRSLMFNLKDSNNPDFRRKVLLGVVEPEQLINMSTAE 293
Query: 287 MVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSS- 345
M S+ ++ Q+I E+A + +GG P + ++ CGRCG +KTT + S+
Sbjct: 294 MASEQRKQEYQKI-TEKA--LFECERGGQ--PKATTDQFKCGRCGQRKTTYYQMQTRSAD 348
Query: 346 ---AKRIKCLNCYQYWE 359
+ C C W+
Sbjct: 349 EPMTTYVTCCVCNNRWK 365
>gi|225439709|ref|XP_002272768.1| PREDICTED: transcription elongation factor A protein 3 [Vitis
vinifera]
Length = 367
Score = 240 bits (613), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 150/376 (39%), Positives = 226/376 (60%), Gaps = 28/376 (7%)
Query: 1 MEKEVMELCEAAKRRAE---TAASAEGELEEAQCIAALDQLHKSSITCQLLVSTQLVRHL 57
ME+E++EL E+AK+ A+ T + E +C+ AL QL +T + L STQ+ + L
Sbjct: 1 MERELVELFESAKKAADAAATDGVSSNGPEVGRCVDALKQLKSFPVTYEALASTQVGKRL 60
Query: 58 LPLTKHPRQKIQDTASELILSWRSLFLEQMK-----GDEENGSF-AICGEIKSANVEIAK 111
LTKHP+ KIQ AS+L+ W+ + +++ + G + NGS A + ++ VE+A
Sbjct: 61 RHLTKHPKGKIQSLASDLLEMWKKVVIDETRNKKNGGLDNNGSAKAEVSKTETVKVEMAH 120
Query: 112 GKRQITSDEFEQALDVEVVKVRRVDQKGAPRSKKLVGSEFIVTEETNSLDNVDAE---AI 168
+ + E+A VE VK+ + D+ + + + SE I E+ ++NVD +
Sbjct: 121 KAGGV---KVEKASKVETVKIEKFDRGSSTKPGSVSRSETIKVEK--RVENVDERKQFSS 175
Query: 169 REEKPASAVVPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVA 228
++ P ++ P KL +MIKCND R+++RE L +AL KV+ E DE+++D++N CDPIRVA
Sbjct: 176 VKKPPQASNGPPKLTAMIKCNDALRDKVRELLAEALFKVASEADEDIKDEVNACDPIRVA 235
Query: 229 ITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMV 288
++ ES+MFEK G S GT + KYRSI+FN+ DP NPD RRKVLLG VKP+ LI MS EEM
Sbjct: 236 VSVESVMFEKMGRSNGTQKFKYRSIMFNIKDPNNPDLRRKVLLGEVKPDRLINMSPEEMA 295
Query: 289 SDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR 348
S+ +R N QIK++ D +GG P + ++ CGRCG +KTT + Q SA
Sbjct: 296 SNQRQRENSQIKEKALFD---CERGG--PPKATTDQFKCGRCGQRKTTYY-QLQTRSADE 349
Query: 349 -----IKCLNCYQYWE 359
+ C+NC +W+
Sbjct: 350 PMTTFVTCVNCNNHWK 365
>gi|224087871|ref|XP_002308256.1| predicted protein [Populus trichocarpa]
gi|222854232|gb|EEE91779.1| predicted protein [Populus trichocarpa]
Length = 352
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 140/372 (37%), Positives = 222/372 (59%), Gaps = 37/372 (9%)
Query: 1 MEKEVMELCEAAKRRAETA----ASAEGELEEAQCIAALDQLHKSSITCQLLVSTQLVRH 56
ME E +EL + AK+ A+ + S+ G E +C+ +L QL K +T +LLVSTQ+ +
Sbjct: 1 MEMEFVELFDEAKKAADASLNDDVSSSGP-EVTRCVDSLKQLRKFKVTSELLVSTQVGKK 59
Query: 57 LLPLTKHPRQKIQDTASELILSWRSLFLEQMKGDEENGSF----AICGEI-KSANVEIAK 111
L PL KHP++KI+ AS+L+ W+ + +++ + ++NGS ++ E+ KS V++ K
Sbjct: 60 LRPLAKHPKEKIRAVASDLLEMWKKMVIDETR--KKNGSIDSKSSVKAEVSKSETVKVEK 117
Query: 112 GKRQITSDEFEQALDVEVVKVRRVDQKGAPRSKKLVGSEFIVTEETNSLDNVDAEAIREE 171
R+ + + E+A E VKV ++DQ + +K+ E +T+S+ ++
Sbjct: 118 L-RKTSVVKVERASTSETVKVEKMDQDKTVKVEKMSKQEI----QTSSV---------KQ 163
Query: 172 KPASAVVPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITA 231
S + P KL +++KCND R++IRE L +ALSKV+ E DE+++D++ CDPIRVA++
Sbjct: 164 PSQSPIGPPKLKTLVKCNDALRDKIRELLAEALSKVASEADEDIRDEVEACDPIRVAVSV 223
Query: 232 ESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDG 291
ES+MFEK G S G ++KYRSI+FN+ D NPDFRRKVLLG V+PE L+ M EEM S+
Sbjct: 224 ESMMFEKLGRSNGAQKLKYRSIMFNIKDQNNPDFRRKVLLGEVQPERLVTMGPEEMASEQ 283
Query: 292 SRRLNQQIKKERASDRYLPWKGGYLGPIYHST-RYMCGRCGHKKTTNHGNDQNSS----A 346
+R N QIK++ + + G +T ++ CGRC +K T + S+
Sbjct: 284 RKRENNQIKEK------VLFDCERSGQAQATTDQFKCGRCRQRKCTYYQMQTRSADEPMT 337
Query: 347 KRIKCLNCYQYW 358
+ C+NC +W
Sbjct: 338 TYVTCVNCNNHW 349
>gi|255559741|ref|XP_002520890.1| transcription elongation factor s-II, putative [Ricinus communis]
gi|223540021|gb|EEF41599.1| transcription elongation factor s-II, putative [Ricinus communis]
Length = 330
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 141/363 (38%), Positives = 201/363 (55%), Gaps = 49/363 (13%)
Query: 2 EKEVMELCEAAKRRA-ETAASAEGELEEAQCIAALDQLHKSSITCQLLVSTQLVRHLLPL 60
EKE++EL E AK+ A T +G EE++C+ AL QL +T QLLVSTQ+ + L PL
Sbjct: 8 EKELVELFEVAKKAAGATELEEKGGAEESRCLDALAQLKAFPVTAQLLVSTQVGKLLRPL 67
Query: 61 TKHPRQKIQDTASELILSWRSLFLEQMKGDEENGSFAICGEIKSA-NVEIAKGKRQITSD 119
TKH R+ IQD AS++ W+ FLEQ ++NG +KS N++I K +
Sbjct: 68 TKHSRKNIQDLASDVFPLWKKKFLEQTSSTKKNGMLEDKTSVKSTENIKIEKTR------ 121
Query: 120 EFEQALDVEVVKVRRVDQKGAPRSKKLVGSEFIVTEETNSLDNVDAEAIREEKPASAVVP 179
+ VE + + KG PRS K+V SE ++
Sbjct: 122 ----TIKVEA----KTEHKGEPRSAKVVESECLLRS------------------------ 149
Query: 180 QKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKW 239
++ S+ KCND R+ IRE+LY+AL KVS E +EE+Q ++N CD I VA+ ES +F W
Sbjct: 150 PRMKSIPKCNDPSRDNIREQLYEALCKVSSEANEEIQKEVNACDAIGVAVAVESALFSNW 209
Query: 240 GHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQI 299
G S G+ +KYRS++FN D +NPDFRRKVLLG VKPE + ++SSEEM SD R+ N++I
Sbjct: 210 GPSNGSDRIKYRSLIFNTRDAKNPDFRRKVLLGQVKPERIAELSSEEMASDERRKKNKEI 269
Query: 300 KKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSS----AKRIKCLNCY 355
K ++ L P + ++ CGRCG +KT+ + S+ + C+NC
Sbjct: 270 K-----EKALLVCQLAGAPKATTDQFKCGRCGQRKTSYYQMQTRSADEPMTTYVTCVNCS 324
Query: 356 QYW 358
W
Sbjct: 325 NRW 327
>gi|388514187|gb|AFK45155.1| unknown [Medicago truncatula]
Length = 369
Score = 231 bits (588), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 148/376 (39%), Positives = 222/376 (59%), Gaps = 38/376 (10%)
Query: 5 VMELCEAAKRRAETAASAEGE-LEEAQCIAALDQLHKSSITCQLLVSTQLVRHLLPLTKH 63
++EL EAAK+ A+ + S + EE +C+ AL+QL + ++LV+TQ+ +HL LTKH
Sbjct: 9 LVELYEAAKKAADASTSTDNSPSEETRCLDALEQLKNFPVNYKILVNTQVGKHLKTLTKH 68
Query: 64 PRQKIQDTASELILSWRSLFLEQMKGDEENGSFAICGEIKSANVEIAK-GKRQIT-SDEF 121
PR+ I+ A +LI W+ + +++ +N + A +++S N E AK GK Q + S +
Sbjct: 69 PRENIRTFAVDLIAIWKDVIIKET---SKNKNGASDSKVESTNGERAKAGKLQKSPSVKV 125
Query: 122 EQALDVEVVKVRRVDQKGAPRSKKLVGSEF------IVTEETNSLDNVDAEAIREEKP-- 173
E+ E KV +V+ G S KL + E+T+ N+ A +EEKP
Sbjct: 126 EKG---ESAKVEKVNGNG---SSKLSSGNVRAQNVDVKIEKTDRTSNIKA---KEEKPVS 176
Query: 174 ------ASAVVPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRV 227
+SA P KL +MIK ND R++IRE L AL+KV E DE++ D++N CDPIRV
Sbjct: 177 AAKKISSSAAAPPKLKTMIKSNDSARDKIRELLRDALAKVFEEADEDMMDEVNACDPIRV 236
Query: 228 AITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEM 287
A+T ES++FE WG S G +VKYRS++FNL D +NPDFRRKVLLG V+P+ L MSS EM
Sbjct: 237 AVTVESVLFENWGPSNGAQKVKYRSLMFNLKDQKNPDFRRKVLLGTVEPQRLAVMSSAEM 296
Query: 288 VSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSS-- 345
S+ ++ N++I+++ D + G L P + ++ CGRCG +KTT + S+
Sbjct: 297 ASEQRKQENEKIEQKALFD----CERG-LQPKATTDQFKCGRCGQRKTTYYQMQTRSADE 351
Query: 346 --AKRIKCLNCYQYWE 359
+ C+NC W+
Sbjct: 352 PMTTYVTCVNCNNRWK 367
>gi|224139382|ref|XP_002323085.1| predicted protein [Populus trichocarpa]
gi|222867715|gb|EEF04846.1| predicted protein [Populus trichocarpa]
Length = 334
Score = 223 bits (569), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 135/368 (36%), Positives = 210/368 (57%), Gaps = 45/368 (12%)
Query: 1 MEKEVMELCEAAKRRAETA----ASAEGELEEAQCIAALDQLHKSSITCQLLVSTQLVRH 56
MEKE++EL + AK+ A+ + S+ G E ++C+ +L QL K +T ++LVSTQ+ +
Sbjct: 1 MEKELVELFDKAKKAADASLNDDKSSSGP-EVSRCVDSLKQLRKFKVTSEILVSTQVGKK 59
Query: 57 LLPLTKHPRQKIQDTASELILSWRSLFLEQMKGDEENGSFAICGEIKSANVEIAKGKRQI 116
L PL KHP+ KI+ AS+L+ +W+ + +++ ++ N + K Q
Sbjct: 60 LRPLAKHPKDKIRAVASDLLETWKKIVIDET--------------MRKKNATVKVEKLQK 105
Query: 117 TSDEFEQALDVEVVKVRRVDQKGAPRSKKLVGSEFIVTEETNSLDNVDAEAIREEKPASA 176
TS + E VKV ++DQ + + E +T+S+ +KP+ A
Sbjct: 106 TS--MVKVSTSETVKVEKMDQDKTVKVAQTCKEEI----QTSSV----------KKPSQA 149
Query: 177 VV-PQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLM 235
P KL +++KCND R++IRE L +ALSKV+ E DE+++D++ CDPIRVA++ ES M
Sbjct: 150 PTGPPKLKTLVKCNDALRDKIRELLAEALSKVASEADEDIRDEVEACDPIRVAVSVESAM 209
Query: 236 FEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRL 295
FEK G S G ++KYRSI+FN+ D NPD RRKVLLG V+P+ L+ M EEM S+ +R
Sbjct: 210 FEKLGRSNGAQKMKYRSIMFNIKDQNNPDLRRKVLLGQVQPQRLVTMPPEEMASEQRKRE 269
Query: 296 NQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSS----AKRIKC 351
N QIK++ D +GG + ++ CGRCG +K T + S+ + C
Sbjct: 270 NNQIKEKALFD---CERGGKAEAT--TDQFKCGRCGQRKCTYYQMQTRSADEPMTTYVTC 324
Query: 352 LNCYQYWE 359
+NC +W+
Sbjct: 325 VNCNNHWK 332
>gi|297735532|emb|CBI18026.3| unnamed protein product [Vitis vinifera]
Length = 322
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 142/369 (38%), Positives = 207/369 (56%), Gaps = 59/369 (15%)
Query: 1 MEKEVMELCEAAKRRAE---TAASAEGELEEAQCIAALDQLHKSSITCQLLVSTQLVRHL 57
ME+E++EL E+AK+ A+ T + E +C+ AL QL +T + L STQ+ + L
Sbjct: 1 MERELVELFESAKKAADAAATDGVSSNGPEVGRCVDALKQLKSFPVTYEALASTQVGKRL 60
Query: 58 LPLTKHPRQKIQDTASELILSWRSLFLEQMKGDEENGSFAICGEIKSANVEIAKGKRQIT 117
LTKHP+ KIQ AS+L+ W+ + +++ + +++NG G K+
Sbjct: 61 RHLTKHPKGKIQSLASDLLEMWKKVVIDETR-NKKNGGLDNNGSAKA------------- 106
Query: 118 SDEFEQALDVEVV--KVRRVDQKGAPRSKKLVGSEFIVTEETNSLDNVDAEAIREEKPAS 175
E+A VE V +V VD++ S K + P +
Sbjct: 107 ----EKASKVETVEKRVENVDERKQFSSVK-------------------------KPPQA 137
Query: 176 AVVPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLM 235
+ P KL +MIKCND R+++RE L +AL KV+ E DE+++D++N CDPIRVA++ ES+M
Sbjct: 138 SNGPPKLTAMIKCNDALRDKVRELLAEALFKVASEADEDIKDEVNACDPIRVAVSVESVM 197
Query: 236 FEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRL 295
FEK G S GT + KYRSI+FN+ DP NPD RRKVLLG VKP+ LI MS EEM S+ +R
Sbjct: 198 FEKMGRSNGTQKFKYRSIMFNIKDPNNPDLRRKVLLGEVKPDRLINMSPEEMASNQRQRE 257
Query: 296 NQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IK 350
N QIK++ D +GG P + ++ CGRCG +KTT + Q SA +
Sbjct: 258 NSQIKEKALFDCE---RGG--PPKATTDQFKCGRCGQRKTTYY-QLQTRSADEPMTTFVT 311
Query: 351 CLNCYQYWE 359
C+NC +W+
Sbjct: 312 CVNCNNHWK 320
>gi|255641093|gb|ACU20825.1| unknown [Glycine max]
Length = 350
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 141/313 (45%), Positives = 206/313 (65%), Gaps = 21/313 (6%)
Query: 1 MEKEVMELCEAAKRRAETAASAEGELEEAQCIAALDQLHKSSITCQLLVSTQLVRHLLPL 60
MEKE++EL EAAK+ A+ A S +GE EE++CI AL+QL K + ++LV+TQ+ +HL L
Sbjct: 1 MEKELVELYEAAKKAADAAISGDGEHEESRCIDALEQLKKFPVNYKILVNTQVGKHLKVL 60
Query: 61 TKHPRQKIQDTASELILSWRSLFLEQMKGDEENGSFAICGEIKSANVEIAK-GKRQIT-S 118
TKHPRQKI+ A +LI W+ + +++ ++ GS + + +SAN E +K GK Q + S
Sbjct: 61 TKHPRQKIKSFAIDLIEIWKGIIIKETGKNKNGGSDS---KDESANREKSKAGKMQKSPS 117
Query: 119 DEFEQALDVEVVKVRRVDQKGAPRSK----KLVGSEFIVTEETNSLDNVDAEAIREEKP- 173
+ E+ E VKV ++++ G +S K V ++ + E T+ +V E I EEKP
Sbjct: 118 VKIEKG---ETVKVEKIERNGTSKSSFENMKKVQND-VKNERTDRAASVKMEKIAEEKPI 173
Query: 174 -------ASAVVPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIR 226
+S+ P KL +MIK +D R++I+E L++ALSKV+ E DE++ +N DPIR
Sbjct: 174 SGAKKMSSSSTAPPKLKTMIKSSDATRDKIKEILHEALSKVTREADEDLVAVVNDSDPIR 233
Query: 227 VAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEE 286
VA+T ES++FEKWG S G +VKYRS++FNL D NPDFRRKVLLG V+PE LI MS+ E
Sbjct: 234 VAVTVESVLFEKWGPSNGAQKVKYRSLMFNLKDSNNPDFRRKVLLGVVEPEQLINMSTAE 293
Query: 287 MVSDGSRRLNQQI 299
M S+ ++ Q+I
Sbjct: 294 MASEQRKQEYQKI 306
>gi|255575598|ref|XP_002528699.1| transcription elongation factor s-II, putative [Ricinus communis]
gi|223531871|gb|EEF33688.1| transcription elongation factor s-II, putative [Ricinus communis]
Length = 342
Score = 218 bits (554), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 147/368 (39%), Positives = 216/368 (58%), Gaps = 37/368 (10%)
Query: 1 MEKEVMELCEAAKRRAETAAS---AEGELEEAQCIAALDQLHKSSITCQLLVSTQLVRHL 57
ME+E++EL EAAK+ A+ AAS + E +C+ AL QL I+ +LVS+Q+ + L
Sbjct: 1 MERELVELFEAAKKAADAAASDGVSSNGPEVVRCVDALKQLKIFPISYDILVSSQVGKRL 60
Query: 58 LPLTKHPRQKIQDTASELILSWRSLFLEQMKGDEENGSFAICGEIKSANVEIAKGKRQIT 117
PLTKHPR+KIQ AS+L+ W+ + +++ ++NG+ +K+ E++K
Sbjct: 61 RPLTKHPREKIQTVASDLLEMWKKIVIDET-TRKKNGTVDNKSSVKA---EVSK------ 110
Query: 118 SDEFEQALDVEVVKVRRVDQKGAPRSKKLVGSEFIVTEETNSLDNVDAEAIREEKPASA- 176
VE +KV +V QK + + + E V E S + +AI +KP+ A
Sbjct: 111 ---------VETIKVEKV-QKASTVKVEKIDRERTVKVEKKSEEK--QQAIDVKKPSQAS 158
Query: 177 VVPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMF 236
V P KL +++KCND R++IRE L +ALSKV E +E+ +D+++ CDPIRVA++ ES MF
Sbjct: 159 VTPPKLTAIVKCNDALRDKIRELLVEALSKVVSEANEDGRDEISKCDPIRVAVSVESAMF 218
Query: 237 EKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLN 296
EK G S G + KYRSI+FNL DP NPD RRKVLLG VKPE LI M+ EEM S +
Sbjct: 219 EKMGRSNGAQKFKYRSIMFNLKDPNNPDLRRKVLLGEVKPERLISMTPEEMASKERQEEI 278
Query: 297 QQIKKERASDRYLPWKGGYLGPIYHST-RYMCGRCGHKKTTNHGNDQNSS----AKRIKC 351
QIK++ D + G GP +T ++ C RCG +K T + S+ + C
Sbjct: 279 NQIKEKALFD----CERG--GPAKATTDQFKCSRCGQRKCTYYQMQTRSADEPMTTYVTC 332
Query: 352 LNCYQYWE 359
+NC ++W+
Sbjct: 333 VNCNKHWK 340
>gi|312283193|dbj|BAJ34462.1| unnamed protein product [Thellungiella halophila]
Length = 381
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 141/391 (36%), Positives = 216/391 (55%), Gaps = 44/391 (11%)
Query: 1 MEKEVMELCEAAKRRAET----AASAEGELEEAQCIAALDQLHKSSITCQLLVSTQLVRH 56
ME E++EL E AK+ A+ ++ G E +QC+ AL QL K +T LV+TQ+ +
Sbjct: 1 METELIELFEGAKKAADAAALDGVTSSGP-EISQCLDALKQLKKFPVTYDTLVATQVGKK 59
Query: 57 LLPLTKHPRQKIQDTASELILSWRSLFLEQMKGDEENGSF-------AICGEIKSANVEI 109
L L+KHP ++I+ A++L+ W+ + +E+ ++ GS A G+I +VE
Sbjct: 60 LRSLSKHPVEEIKSVATDLLEIWKKVVIEETSKAKKIGSTNGVKSETAKDGKIDRKDVER 119
Query: 110 AKGKRQITSDEFEQALDVEVVKVRRVDQKGAPRSKKLVGSEFIVTEETNSLDN---VD-- 164
+ + ++ + +KV +K P +K VG++ E+ N ++ +D
Sbjct: 120 TSNPAPVKVQKLQRGDSAKSIKV----EKKEPDNK--VGAKIERKEQDNKVNTGAKLDHR 173
Query: 165 AEAIREEK-----------PA-SAVVPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVD 212
+ +++EK PA S P KL SM+KCND R++IRE L +ALS+V GE D
Sbjct: 174 GQTVKDEKVSKENQSSTKAPAKSPNAPPKLTSMLKCNDPVRDKIREMLVEALSRVHGESD 233
Query: 213 EEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLG 272
E ++K+NGCDP RVA++ ES MFEK G S G + KYRSI+FNL D NPD RR+VL G
Sbjct: 234 EYDREKVNGCDPFRVAVSVESHMFEKLGRSTGAEKAKYRSIMFNLRDSNNPDLRRRVLTG 293
Query: 273 HVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGH 332
V PE LI +S+EEM SD ++ N QIK +++L P + ++ CGRCG
Sbjct: 294 EVPPEKLITLSAEEMASDKRKQENNQIK-----EKFLFNCEQGPAPKASTDQFKCGRCGQ 348
Query: 333 KKTTNHGNDQNSS----AKRIKCLNCYQYWE 359
+K T + S+ + C+NC +W+
Sbjct: 349 RKCTYYQMQTRSADEPMTTYVTCVNCNNHWK 379
>gi|224286619|gb|ACN41014.1| unknown [Picea sitchensis]
Length = 328
Score = 207 bits (527), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 131/363 (36%), Positives = 194/363 (53%), Gaps = 47/363 (12%)
Query: 1 MEKEVMELCEAAKRRAETAASAEGELEEAQCIAALDQLHKSSITCQLLVSTQLVRHLLPL 60
+EKE++EL E K+ A+ A + E E E +C+ AL L +T +LVSTQ+ + L L
Sbjct: 7 VEKELLELFEKVKKAADKAITNEAE--EQRCLDALKALRAVPVTMGVLVSTQVGKRLRNL 64
Query: 61 TKHPRQKIQDTASELILSWRSLFLEQMKGDEENGSFAICGEIKSANVEIAKGKRQITSDE 120
TKHP++ I A++L+ SW+ + + + N K + D+
Sbjct: 65 TKHPQENICTLATDLLDSWKKVVTSETLANSGN-------------------KATQSEDK 105
Query: 121 FEQALDVEVVKVRRVDQKGAPRSKKLVGSEFIVTEETNSLDNVDAEAIREEKPASAVVPQ 180
+++ VE V+R K + K+ S I + +S N P
Sbjct: 106 QSKSIKVEDNAVKRESVKVEKKPKEEEAS--ITNKNVSSSSNG---------------PP 148
Query: 181 KLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWG 240
KL SMIKCND R++IRE +Y+A SKV E + E ++N CDP+RVA+T E+LMFEK G
Sbjct: 149 KLTSMIKCNDAVRDKIREIIYEAFSKVVNEAEGENMVRINACDPVRVAVTVETLMFEKLG 208
Query: 241 HSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIK 300
S G ++KYRSI+FNL D NPD RR+VLLG +KPE LI M++EEM SD + N+QIK
Sbjct: 209 RSNGAQKLKYRSIIFNLKDANNPDLRRRVLLGEIKPEKLIVMTAEEMASDQRKLENKQIK 268
Query: 301 KERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSS----AKRIKCLNCYQ 356
D+ L + P + ++ CG+CG +K T + S+ + C+NC
Sbjct: 269 -----DKALFECERGIKPKATTDQFKCGKCGQRKCTYYQLQTRSADEPMTTFVTCVNCNN 323
Query: 357 YWE 359
+W+
Sbjct: 324 HWK 326
>gi|449499153|ref|XP_004160740.1| PREDICTED: transcription elongation factor A protein 2-like
[Cucumis sativus]
Length = 290
Score = 201 bits (510), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 119/299 (39%), Positives = 179/299 (59%), Gaps = 30/299 (10%)
Query: 79 WRSLFLEQMKGDEENG--SFAICGEIKSANVEIAKGKRQITSDEFEQALDVEVVKVRRV- 135
W+ + +++ +++NG S +I S + E + ++F+++ ++V +V +V
Sbjct: 2 WKEIVIKETNKNKKNGNASSKDSPKIGSPSAE------SVKVEKFQKSSSMKVERVSKVE 55
Query: 136 --DQKGAPRSKKLVGSEFIVTE-------ETNSLDNVDAEAIREEKPAS-AVVPQKLVSM 185
D+ GA S K SE +V+E +T+S+ V+ E+KP+S A P KL SM
Sbjct: 56 QFDRNGATSSVKYSKSESVVSERNSVKVEKTDSMVKVERVVKEEKKPSSGAAAPPKLTSM 115
Query: 186 IKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGT 245
IK D R++IRE L++A SKV GE DEE D++N DPIRVA++ ES+MFE WG S G
Sbjct: 116 IKSKDAARDKIRELLFEAFSKVPGEADEEFMDEVNASDPIRVAVSVESVMFENWGGSTGA 175
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
+ KYRSI+FNL DP+NPDFRRKVLLG +KPE +I MS+ +M SD +R N++I ++
Sbjct: 176 QKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMINMSTADMASDQRKRENEEIAQKALF 235
Query: 306 DRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
D +GG P + ++ CGRCG +KTT + Q SA + C+NC +W+
Sbjct: 236 DCE---RGG--APKATTDQFKCGRCGQRKTTYY-QLQTRSADEPMTTFVTCVNCNNHWK 288
>gi|116789178|gb|ABK25146.1| unknown [Picea sitchensis]
Length = 331
Score = 200 bits (509), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 132/367 (35%), Positives = 199/367 (54%), Gaps = 51/367 (13%)
Query: 1 MEKEVMELCEAAKRRAETAASAEG--ELEEAQCIAALDQLHKSSITCQLLVSTQLVRHLL 58
+E E++EL + A++ A+ AA +G E EE +C+ AL L +T +LVSTQ+ + L
Sbjct: 6 VENELVELFQKAQKAADKAAKDDGCEEAEEQRCLDALKALRSVPVTMGILVSTQVGKRLR 65
Query: 59 PLTKHPRQKIQDTASELILSWRSLFLEQMKGDEENGSFAI-CGEIKSANVEIAKGKRQIT 117
+TKHPR+KI+ A+EL+ +W+ + + D N + + + KS VE+ K
Sbjct: 66 NVTKHPREKIRTLAAELLDAWKKVVTSETLPDNGNKATKVEDKQFKSVKVEVNASKG--- 122
Query: 118 SDEFEQALDVEVVKVRRVDQKGAPRSKKLVGSEFIVTEETNSLDNVDAEAIREEKPASAV 177
E VKV + P+ V+ E+I +K +S+
Sbjct: 123 ----------ESVKVEK-----KPK--------------------VETESIGSKKASSSS 147
Query: 178 V-PQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMF 236
P KL SMIKCND R++ RE LY+A SKV E + E ++N CDP+R+A++ E++MF
Sbjct: 148 NGPPKLTSMIKCNDALRDKFREILYEAFSKVVNEAEGEDLARVNACDPVRIAVSVETVMF 207
Query: 237 EKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLN 296
EK G S G + KYRSI+FNL D NPD RR+VLLG +KPE LI M++EEM SD + N
Sbjct: 208 EKLGRSNGAQKFKYRSIMFNLKDGNNPDLRRRVLLGQIKPEKLIVMTAEEMASDNRKLEN 267
Query: 297 QQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSS----AKRIKCL 352
+QIK D+ L + P + ++ CG+CG + T + S+ + C+
Sbjct: 268 KQIK-----DKALFECERGMKPKATTDQFKCGKCGQRMCTYYQLQTRSADEPMTTFVTCV 322
Query: 353 NCYQYWE 359
NC +W+
Sbjct: 323 NCNNHWK 329
>gi|115456173|ref|NP_001051687.1| Os03g0815900 [Oryza sativa Japonica Group]
gi|28876018|gb|AAO60027.1| putative transcription elongation factor [Oryza sativa Japonica
Group]
gi|108711747|gb|ABF99542.1| transcription elongation factor S-II family protein, expressed
[Oryza sativa Japonica Group]
gi|113550158|dbj|BAF13601.1| Os03g0815900 [Oryza sativa Japonica Group]
gi|125546195|gb|EAY92334.1| hypothetical protein OsI_14059 [Oryza sativa Indica Group]
gi|125588382|gb|EAZ29046.1| hypothetical protein OsJ_13099 [Oryza sativa Japonica Group]
Length = 367
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 143/380 (37%), Positives = 215/380 (56%), Gaps = 36/380 (9%)
Query: 1 MEKEVMELCEAAKRRAETAASAEGELEEAQCIAALDQLHKSSITCQLLVSTQLVRHLLPL 60
ME+E++E EAAK+ A+ AA A+ E +C+ A+ +L +T +LVSTQ+ + L L
Sbjct: 1 MERELLETFEAAKKAADAAAGADDSPEADRCLDAMRRLRGLRVTTDVLVSTQVGKRLRYL 60
Query: 61 TKHPRQKIQDTASELILSWRSLFLEQMKGDEENGSFAICGEIKSANVEIAKGKRQITSDE 120
TKHP IQ A++L+ W+ + +E+ K +NG+ G SA A+ + + D+
Sbjct: 61 TKHPHSDIQSMATDLLGYWKKVVIEEGK---KNGTTENVGSTNSA--ARAEKAQPMKVDK 115
Query: 121 FEQALDVEVVKVRRVDQKG-APRSKKLVGSEFIVTEETNS----LDNVDAEAIRE---EK 172
+ V+ K R V+ +G P S K+ E I ++ + ++ EA R +K
Sbjct: 116 SSASGSVKPEK-REVNVRGQKPESIKV---EKITNNDSKNQQVKVERAPKEATRTPDTKK 171
Query: 173 PASAVV-PQKLVSMIKCNDYFRERIREKLYKALSKVSGEVD----EEVQ---DKLNGCDP 224
P+S P KL S++KCND R++IRE L A S+V GE EEV+ D+++ DP
Sbjct: 172 PSSVPNGPPKLTSLVKCNDPTRDKIRELLADAFSRVHGETSKDDREEVRNILDEVDARDP 231
Query: 225 IRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSS 284
RVA+T ES +FE+ G S G ++ KYRSI+FNL N DFRR+VLLG V+PE L+ +S
Sbjct: 232 FRVAVTVESALFERLGRSTGAHKAKYRSIMFNLRADNNTDFRRRVLLGQVRPERLVDISP 291
Query: 285 EEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNS 344
EEM SD + N+QIK++ D +GG P + ++ CGRCG +KTT + Q
Sbjct: 292 EEMASDARKLENKQIKEKALFD---CERGG--APKATTDQFKCGRCGQRKTTYY-QLQTR 345
Query: 345 SAKR-----IKCLNCYQYWE 359
SA + C+NC +W+
Sbjct: 346 SADEPMTTFVTCVNCNNHWK 365
>gi|297823741|ref|XP_002879753.1| transcription factor S-II domain-containing protein [Arabidopsis
lyrata subsp. lyrata]
gi|297325592|gb|EFH56012.1| transcription factor S-II domain-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 378
Score = 191 bits (484), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 126/364 (34%), Positives = 196/364 (53%), Gaps = 48/364 (13%)
Query: 27 EEAQCIAALDQLHKSSITCQLLVSTQLVRHLLPLTKHPRQKIQDTASELILSWRSLFL-E 85
E +QC+ AL QL K +T LV+TQ+ + L L KHP ++I+ A++L+ W+ + + E
Sbjct: 30 EVSQCLDALKQLKKFPVTYDTLVATQVGKKLRSLAKHPIEEIKSVATDLLEIWKKVVIGE 89
Query: 86 QMKGDEENGSFAICGEIKSANVEIAKGKRQITSDEFEQALDVEVVKVRRVD-------QK 138
K + G+ C E K +++ D+ V+V K++R D ++
Sbjct: 90 TAKAKKTEGTNG-CKEAKVNKMDV---------DKPSNPAPVKVQKLQRGDSAKSIKVER 139
Query: 139 GAPRSKKLVGSEFIVTEETNSLDN---VD--AEAIREEKPA------------SAVVPQK 181
P +K + G + E N + N +D +A+++EK + + P K
Sbjct: 140 KEPDNKGVTGVKIERKELDNKVTNGTKIDYRGQAVKDEKVSKDNQSSMKAPAKAPNAPPK 199
Query: 182 LVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGH 241
L +M+KCND R++IRE L AL +V+GE D+ + +N DP+RVA++ ESLMFEK G
Sbjct: 200 LTAMLKCNDPVRDKIRELLVDALCRVAGEADDYERKSVNASDPLRVAVSVESLMFEKLGR 259
Query: 242 SFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKK 301
S G ++KYRSI+FNL D NPD RR+VL G + PE LI +S+EEM SD ++ N QIK+
Sbjct: 260 STGAQKLKYRSIMFNLRDGNNPDLRRRVLTGEISPEKLITLSAEEMASDKRKQENNQIKE 319
Query: 302 ERASD--RYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSS----AKRIKCLNCY 355
+ D R L K + ++ CGRCG +K T + S+ + C+NC
Sbjct: 320 KALFDCERGLAAKA-------STDQFKCGRCGQRKCTYYQMQTRSADEPMTTYVTCVNCD 372
Query: 356 QYWE 359
+W+
Sbjct: 373 NHWK 376
>gi|357124260|ref|XP_003563821.1| PREDICTED: transcription elongation factor A protein 2-like
[Brachypodium distachyon]
Length = 364
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 136/383 (35%), Positives = 210/383 (54%), Gaps = 45/383 (11%)
Query: 1 MEKEVMELCEAAKRRAETAASAEGELEEAQCIAALDQLHKSSITCQLLVSTQLVRHLLPL 60
ME+E++E EAAK+ A+ A G E +C+ AL +L +T ++LVSTQ+ + L L
Sbjct: 1 MERELLETFEAAKKAADAVAEDAGSPEADRCLDALRRLRAFRVTTEVLVSTQVGKRLRYL 60
Query: 61 TKHPRQKIQDTASELILSWRSLFLEQMKGDEENGSFAICGEIKSANVEIAKGKRQITSDE 120
TKHP IQ A++L W+ + +E+ ++NG+ SAN ++ ++ E
Sbjct: 61 TKHPHSDIQAMATDLFGYWKKIVIEET--GKKNGT--------SANEKLDNSAARL---E 107
Query: 121 FEQALDVE------VVKVRRVD-----QKGAPRSKKLVGSEFIVTEETNSLDNVDAEAIR 169
Q++ VE VK+ + D QK + +K+ ++ V E S D
Sbjct: 108 KSQSMKVEKNSSLASVKIEKNDLDIRVQKSDVKVEKIANNDSKVKVEMVS---KDVSRTL 164
Query: 170 EEKPASAVV--PQKLVSMIKCNDYFRERIREKLYKALSKVSGEVD----EEVQ---DKLN 220
+ K +S+V P +L S+++CND R++ RE L +A KVS E EEV+ D++N
Sbjct: 165 DTKKSSSVPNGPPRLTSLVRCNDAARDKYRELLAEAFFKVSKETSKDDREEVRNLLDEVN 224
Query: 221 GCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALI 280
CDP RV++T ES +FE+ G S G ++ KYRSILFNL NPDFRR+VLLG V+P L+
Sbjct: 225 ACDPYRVSVTVESALFERLGRSTGAHKAKYRSILFNLKADNNPDFRRRVLLGEVRPGRLV 284
Query: 281 KMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGN 340
+S +EM SD + N+QIK++ D + G P + ++ CGRCG +KTT +
Sbjct: 285 DISPDEMASDARKLENKQIKEKALFD---CERAG--APKATTDQFKCGRCGQRKTTYYQL 339
Query: 341 DQNSS----AKRIKCLNCYQYWE 359
S+ + C+NC +W+
Sbjct: 340 QTRSADEPMTTFVTCVNCNNHWK 362
>gi|15224901|ref|NP_181390.1| transcript elongation factor IIS [Arabidopsis thaliana]
gi|3786016|gb|AAC67362.1| putative elongation factor [Arabidopsis thaliana]
gi|23297820|gb|AAN13033.1| putative elongation factor [Arabidopsis thaliana]
gi|26450199|dbj|BAC42218.1| putative elongation factor [Arabidopsis thaliana]
gi|330254456|gb|AEC09550.1| transcript elongation factor IIS [Arabidopsis thaliana]
Length = 378
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 122/360 (33%), Positives = 194/360 (53%), Gaps = 40/360 (11%)
Query: 27 EEAQCIAALDQLHKSSITCQLLVSTQLVRHLLPLTKHPRQKIQDTASELILSWRSLFLEQ 86
E +QCI AL QL K +T LV+TQ+ + L L KHP + I+ A++L+ W+ + +E+
Sbjct: 30 EVSQCIDALKQLKKFPVTYDTLVATQVGKKLRSLAKHPVEDIKSVATDLLEIWKKVVIEE 89
Query: 87 MKGDEENGSFAICGEIKSANVEIAK--GKRQITSDEFEQALDVEVVKVRRVDQKGAPRSK 144
++ C E K +++ K + + ++ + +KV R + P +K
Sbjct: 90 TAKAKKTEGTNGCKEAKVNKMDVEKPSNPAPVKVQKLQRGDSAKSIKVERKE----PDNK 145
Query: 145 KLVG-------SEFIVTEETNSLDNVDAEAIREEKPA------------SAVVPQKLVSM 185
+ G + VT T + +A+++EK + +A P KL +M
Sbjct: 146 VVTGVKIERKVPDIKVTNGTKI--DYRGQAVKDEKVSKDNQSSMKAPAKAANAPPKLTAM 203
Query: 186 IKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGT 245
+KCND R++IRE L +AL +V+GE D+ ++ +N DP+RVA++ ESLMFEK G S G
Sbjct: 204 LKCNDPVRDKIRELLVEALCRVAGEADDYERESVNASDPLRVAVSVESLMFEKLGRSTGA 263
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
++KYRSI+FNL D NPD RR+VL G + PE LI +S+E+M SD ++ N QIK++
Sbjct: 264 QKLKYRSIMFNLRDSNNPDLRRRVLTGEISPEKLITLSAEDMASDKRKQENNQIKEKALF 323
Query: 306 D--RYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSS----AKRIKCLNCYQYWE 359
D R L K + ++ CGRCG +K T + S+ + C+NC +W+
Sbjct: 324 DCERGLAAKAS-------TDQFKCGRCGQRKCTYYQMQTRSADEPMTTYVTCVNCDNHWK 376
>gi|18377737|gb|AAL67018.1| putative elongation factor [Arabidopsis thaliana]
Length = 378
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 122/360 (33%), Positives = 194/360 (53%), Gaps = 40/360 (11%)
Query: 27 EEAQCIAALDQLHKSSITCQLLVSTQLVRHLLPLTKHPRQKIQDTASELILSWRSLFLEQ 86
E +QCI AL QL K +T LV+TQ+ + L L KHP + I+ A++L+ W+ + +E+
Sbjct: 30 EVSQCIDALKQLKKFPVTYDTLVATQVGKKLRSLAKHPVEDIKSVATDLLEIWKKVVIEE 89
Query: 87 MKGDEENGSFAICGEIKSANVEIAK--GKRQITSDEFEQALDVEVVKVRRVDQKGAPRSK 144
++ C E K +++ K + + ++ + +KV R + P +K
Sbjct: 90 TAKAKKTEGTNGCKEAKVNKMDVEKPSNPAPVKVQKLQRGDSAKSIKVERKE----PDNK 145
Query: 145 KLVG-------SEFIVTEETNSLDNVDAEAIREEKPA------------SAVVPQKLVSM 185
+ G + VT T + +A+++EK + +A P KL +M
Sbjct: 146 VVTGVKIERKVPDIKVTNGTKI--DYRGQAVKDEKVSKDNQSSMKAPAKAANAPPKLTAM 203
Query: 186 IKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGT 245
+KCND R++IRE L +AL +V+GE D+ ++ +N DP+RVA++ ESLMFEK G S G
Sbjct: 204 LKCNDPVRDKIRELLMEALCRVAGEADDYERESVNASDPLRVAVSVESLMFEKLGRSTGA 263
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
++KYRSI+FNL D NPD RR+VL G + PE LI +S+E+M SD ++ N QIK++
Sbjct: 264 QKLKYRSIMFNLRDSNNPDLRRRVLTGEISPEKLITLSAEDMASDKRKQENNQIKEKALF 323
Query: 306 D--RYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSS----AKRIKCLNCYQYWE 359
D R L K + ++ CGRCG +K T + S+ + C+NC +W+
Sbjct: 324 DCERGLAAKAS-------TDQFKCGRCGQRKCTYYQMQTRSADEPMTTYVTCVNCDNHWK 376
>gi|194708758|gb|ACF88463.1| unknown [Zea mays]
Length = 376
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 137/386 (35%), Positives = 206/386 (53%), Gaps = 46/386 (11%)
Query: 1 MEKEVMELCEAAKRRAETAASAEGELEEAQCIAALDQLHKSSITCQLLVSTQLVRHLLPL 60
ME+E++E +AAK+ A+ A E +C+ AL +L + +LVSTQ+ + L PL
Sbjct: 1 MERELLETFDAAKKAADATAGQGDSPEAGRCLDALHRLRDIRVNTDILVSTQVGKRLRPL 60
Query: 61 TKHPRQKIQDTASELILSWRSLFLEQM---KGDEEN-GSFAICGEIK----------SAN 106
TKHP IQ AS+L W+ + LE+ G EN S G+++ SA+
Sbjct: 61 TKHPHSGIQAVASDLFGYWKKVVLEETGKKNGSSENEKSMDSSGKVEKVRPMKVEKNSAS 120
Query: 107 VEIAKGKRQITSDEFEQALDVEVVKVRRVDQKGAPRSKKLVGSEFIVTEETNSLDNVDAE 166
+ KR + D+ Q D VKV + G+ R++ + V++E N D
Sbjct: 121 ASMKVEKRDV--DDRGQKPDN--VKVEKTASNGS-RTQSVKVER--VSKEVNRTD----- 168
Query: 167 AIREEKPASAVV-PQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEE-------VQDK 218
+KPAS P KL S++KCND R++IRE L +A +KV E + + D+
Sbjct: 169 ---AKKPASVPNGPPKLTSLVKCNDPTRDKIRELLAEAFAKVPRETSNDDRDEVRNILDE 225
Query: 219 LNGCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEA 278
++ CDP RVA+T ES +FE++G S G ++ KYRSI+FNL N DFRR+VL+G V PE
Sbjct: 226 VDACDPFRVAVTVESALFERFGRSTGAHKAKYRSIMFNLRAENNTDFRRRVLIGQVTPER 285
Query: 279 LIKMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNH 338
L +S +EM SD ++ N QIK++ D +G P + ++ CGRCG +KTT +
Sbjct: 286 LPDISPDEMASDARKQENLQIKEKALFDCE---RGA--APKATTDQFKCGRCGQRKTTYY 340
Query: 339 GNDQNSSAKR----IKCLNCYQYWES 360
S+ + + C+NC +W S
Sbjct: 341 QLQTRSADEPMTTFVTCVNCNNHWSS 366
>gi|226498648|ref|NP_001142260.1| uncharacterized protein LOC100274429 [Zea mays]
gi|194688540|gb|ACF78354.1| unknown [Zea mays]
gi|194707892|gb|ACF88030.1| unknown [Zea mays]
Length = 367
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 138/386 (35%), Positives = 206/386 (53%), Gaps = 48/386 (12%)
Query: 1 MEKEVMELCEAAKRRAETAASAEGELEEAQCIAALDQLHKSSITCQLLVSTQLVRHLLPL 60
ME+E++E +AAK+ A+ A E +C+ AL +L + +LVSTQ+ + L PL
Sbjct: 1 MERELLETFDAAKKAADATAGQGDSPEAGRCLDALHRLRDIRVNTDILVSTQVGKRLRPL 60
Query: 61 TKHPRQKIQDTASELILSWRSLFLEQM---KGDEEN-GSFAICGEIK----------SAN 106
TKHP IQ AS+L W+ + LE+ G EN S G+++ SA+
Sbjct: 61 TKHPHSGIQAVASDLFGYWKKVVLEETGKKNGSSENEKSMDSSGKVEKVRPMKVEKNSAS 120
Query: 107 VEIAKGKRQITSDEFEQALDVEVVKVRRVDQKGAPRSKKLVGSEFIVTEETNSLDNVDAE 166
+ KR + D+ Q D VKV + G+ R++ + V++E N D
Sbjct: 121 ASMKVEKRDV--DDRGQKPDN--VKVEKTASNGS-RTQSVKVER--VSKEVNRTD----- 168
Query: 167 AIREEKPASAVV-PQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEE-------VQDK 218
+KPAS P KL S++KCND R++IRE L +A +KV E + + D+
Sbjct: 169 ---AKKPASVPNGPPKLTSLVKCNDPTRDKIRELLAEAFAKVPRETSNDDRDEVRNILDE 225
Query: 219 LNGCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEA 278
++ CDP RVA+T ES +FE++G S G ++ KYRSI+FNL N DFRR+VL+G V PE
Sbjct: 226 VDACDPFRVAVTVESALFERFGRSTGAHKAKYRSIMFNLRAENNTDFRRRVLIGQVTPER 285
Query: 279 LIKMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNH 338
L +S +EM SD ++ N QIK++ D +G P + ++ CGRCG +KTT +
Sbjct: 286 LPDISPDEMASDARKQENLQIKEKALFD---CERGA--APKATTDQFKCGRCGQRKTTYY 340
Query: 339 GNDQNSSAKR-----IKCLNCYQYWE 359
Q SA + C+NC +W+
Sbjct: 341 -QLQTRSADEPMTTFVTCVNCNNHWK 365
>gi|242032519|ref|XP_002463654.1| hypothetical protein SORBIDRAFT_01g003660 [Sorghum bicolor]
gi|241917508|gb|EER90652.1| hypothetical protein SORBIDRAFT_01g003660 [Sorghum bicolor]
Length = 368
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 136/384 (35%), Positives = 201/384 (52%), Gaps = 43/384 (11%)
Query: 1 MEKEVMELCEAAKRRAETAASAEGELEEAQCIAALDQLHKSSITCQLLVSTQLVRHLLPL 60
ME+E++E +AAK+ A+ A+ E +C+ AL +L + +LVSTQ+ + L PL
Sbjct: 1 MERELLETFDAAKKAADATAADGDSPEADRCLDALRRLRDIRVNTDILVSTQVGKRLRPL 60
Query: 61 TKHPRQKIQDTASELILSWRSLFLEQMKGDEENGSFAICGEIKSANVEIAKGKRQITSDE 120
TKHP IQ A++L W+ + LE+ G + GS S VE + + + +
Sbjct: 61 TKHPHSGIQAVAADLFGYWKKVVLEE-SGKKNGGSENERSSDSSGKVEKVRPMK-VEKNS 118
Query: 121 FEQALDVEVVKVRRVDQKG-APRSKKL--VGSEFIVTEETNSLDNVDAEAIRE---EKPA 174
++ VE R VD +G P S K+ S T+ ++ V E R +KPA
Sbjct: 119 ASASMKVEK---RDVDVRGQKPGSVKVEKTASNGSRTQSVK-VERVSKEVSRTPDAKKPA 174
Query: 175 SAVV-PQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEE-------VQDKLNGCDPIR 226
S KL S++KCND R++IRE L +A +KVS E + + D+++ CDP R
Sbjct: 175 STPSGAPKLTSLVKCNDPTRDKIRELLAEAFAKVSRETSNDDRDEVRNILDEVDACDPYR 234
Query: 227 VAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEE 286
VA+ ES +FE+ G S G ++ KYRSI+FNL N DFRR+VL+G V PE L +S +E
Sbjct: 235 VAVKVESALFERLGRSTGAHKTKYRSIMFNLRAENNTDFRRRVLIGEVTPEGLPDISPDE 294
Query: 287 MVSDGSRRLNQQIKK------ERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGN 340
M SD ++ N QIK+ ERA P + ++ CGRCG +KTT +
Sbjct: 295 MASDARKQENMQIKEKALFECERAG-----------APKATTDQFKCGRCGQRKTTYY-Q 342
Query: 341 DQNSSAKR-----IKCLNCYQYWE 359
Q SA + C+NC +W+
Sbjct: 343 LQTRSADEPMTTFVTCVNCNNHWK 366
>gi|226504526|ref|NP_001149284.1| transcription elongation factor A protein 2 [Zea mays]
gi|195626030|gb|ACG34845.1| transcription elongation factor A protein 2 [Zea mays]
Length = 368
Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 134/379 (35%), Positives = 206/379 (54%), Gaps = 33/379 (8%)
Query: 1 MEKEVMELCEAAKRRAETAASAEGELEEAQCIAALDQLHKSSITCQLLVSTQLVRHLLPL 60
M++E++E +AAK+ A+ AA E +C+ AL +L + +LVSTQ+ + L PL
Sbjct: 1 MDRELLETFDAAKKAADAAAGDGNSPEAGRCLDALRRLRDIRVNTDILVSTQVGKRLRPL 60
Query: 61 TKHPRQKIQDTASELILSWRSLFLEQMKGDEENGSFAICGEIKSANVEIAKGKRQITSDE 120
TKHP IQ A++L W+ + LE+ G + GS S VE A+ + I +
Sbjct: 61 TKHPHSGIQAVAADLFGYWKKVVLEE-SGKKNGGSENERSSDSSGKVEKARSVK-IEKNS 118
Query: 121 FEQALDVEVVKVRRVDQKG-APRSKKLVGSEFIVTE-ETNSLDNVDAEAIRE---EKPAS 175
++ +E R VD +G P + K+ + ++ ++ ++ V E IR ++PAS
Sbjct: 119 ASASMKLEK---RDVDVRGQKPNNAKVEKTTSNGSKAQSVKVERVSKEVIRTPDAKRPAS 175
Query: 176 AVVPQ---KLVSMIKCNDYFRERIREKLYKALSKVSGEVDEE-------VQDKLNGCDPI 225
VP KL S++KCND R++IRE L +A +VS E ++ + D++ DP
Sbjct: 176 --VPNGHPKLTSLVKCNDPTRDKIRELLAEAFVRVSRETSDDDRDEVRNILDEVEARDPY 233
Query: 226 RVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSE 285
RVA+T ES +FE+ G S GT+ KYRSI+FNL N DFRR+VL+G V PE L +S +
Sbjct: 234 RVAVTVESALFERLGPSTGTHRAKYRSIMFNLRAESNTDFRRRVLIGLVAPERLPDVSPD 293
Query: 286 EMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSS 345
EM SD ++ N QIK++ D +G P + ++ C RCG +KTT + Q S
Sbjct: 294 EMASDARKQENMQIKEKALFD---CERGA--APKATTDQFKCARCGQRKTTYY-QLQTRS 347
Query: 346 AKR-----IKCLNCYQYWE 359
A + C+NC +W+
Sbjct: 348 ADEPMTTFVTCVNCNNHWK 366
>gi|195622302|gb|ACG32981.1| transcription elongation factor A protein 2 [Zea mays]
gi|223947497|gb|ACN27832.1| unknown [Zea mays]
gi|413932648|gb|AFW67199.1| transcription elongation factor A protein 2 [Zea mays]
Length = 368
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 133/379 (35%), Positives = 204/379 (53%), Gaps = 33/379 (8%)
Query: 1 MEKEVMELCEAAKRRAETAASAEGELEEAQCIAALDQLHKSSITCQLLVSTQLVRHLLPL 60
M++E++E +AAK+ A+ AA E +C+ AL +L + +LVSTQ+ + L PL
Sbjct: 1 MDRELLETFDAAKKAADEAAGDGNSPEAGRCLDALRRLRDIRVNTDILVSTQVGKRLRPL 60
Query: 61 TKHPRQKIQDTASELILSWRSLFLEQMKGDEENGSFAICGEIKSANVEIAKGKRQITSDE 120
TKHP IQ A++L W+ + LE+ G + GS S VE + + I +
Sbjct: 61 TKHPHSGIQAVAADLFGYWKKVVLEE-SGKKNGGSENERSSDSSGKVEKVRPVK-IEKNS 118
Query: 121 FEQALDVEVVKVRRVDQKG-APRSKKLVGSEFIVTE-ETNSLDNVDAEAIR---EEKPAS 175
++ +E R VD +G P + K+ + ++ ++ ++ V E IR ++PAS
Sbjct: 119 ASASMKLEK---RDVDVRGQKPNNVKVEKTTSNGSKAQSVKVERVSKEVIRTPDSKRPAS 175
Query: 176 AVVPQ---KLVSMIKCNDYFRERIREKLYKALSKVSGEVDEE-------VQDKLNGCDPI 225
VP KL S++KCND R++IRE L +A VS E ++ + D++ CDP
Sbjct: 176 --VPNGHPKLTSLVKCNDPTRDKIRELLAEAFVSVSRETSDDDRDEVKNILDEVEACDPY 233
Query: 226 RVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSE 285
RVA+T ES +FE+ G S GT+ KYRSI+FNL N DFRR+VL+G V PE L + +
Sbjct: 234 RVAVTVESALFERLGPSTGTHRAKYRSIMFNLRAENNTDFRRRVLIGLVAPERLPDIPPD 293
Query: 286 EMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSS 345
EM SD ++ N QIK++ D +G P + ++ C RCG +KTT + Q S
Sbjct: 294 EMASDARKQENMQIKEKALFD---CERGA--APKATTDQFKCARCGQRKTTYY-QLQTRS 347
Query: 346 AKR-----IKCLNCYQYWE 359
A + C+NC +W+
Sbjct: 348 ADEPMTTFVTCVNCNNHWK 366
>gi|115471257|ref|NP_001059227.1| Os07g0229700 [Oryza sativa Japonica Group]
gi|113610763|dbj|BAF21141.1| Os07g0229700 [Oryza sativa Japonica Group]
gi|215737106|dbj|BAG96035.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 379
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 123/381 (32%), Positives = 203/381 (53%), Gaps = 32/381 (8%)
Query: 1 MEKEVMELCEAAKRRAETAASAEGEL--------EEAQCIAALDQLHKSSITCQLLVSTQ 52
ME+E++E EAA++ A+ A E A+C+ AL +L + +T LVSTQ
Sbjct: 7 MERELLEAFEAARKAADAVGEAAAAAGAGEGESPEAARCVDALRRLRGARVTTAALVSTQ 66
Query: 53 LVRHLLPLTKHPRQKIQDTASELILSWRSLFLEQMKGDEENGSFAICGEIKSANVEIAKG 112
+ R + LTKHP I+ TAS+L+ W+ + +E+ D++NG+ G+ S V++ K
Sbjct: 67 IGRRIRYLTKHPHSSIKATASDLLGHWKKVVIEE---DKKNGALQ-NGKSSSTVVKVEKV 122
Query: 113 K-RQITSDEFEQALDVEVVKVRRVDQKGAPRSKKLVGSEFIVTE-ETNSLDNVDAEAIRE 170
+ ++ ++ + R V+ KG + +K +E + + V +
Sbjct: 123 EPMKVEKASPRATVNNNNMDTRVVNHKGG-KVEKFSNAELRTQSIKVEKVQKVVHKVSSV 181
Query: 171 EKPASAVV-PQKLVSMIKCNDYFRERIREKLYKALSKVSGEVD----EEVQD---KLNGC 222
EKP+ P +L S++KC D R+RIR L A S+VS E EEV++ ++ C
Sbjct: 182 EKPSPVQGGPPRLTSVVKCGDASRDRIRAILGDAFSRVSEETRKDDREEVRNIIEEVKAC 241
Query: 223 DPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKM 282
DP R+A+ E +F+K G+ G + +YRS++FNL D N DFRR+VLLG V+PE + +
Sbjct: 242 DPFRIAVMVECALFQKLGNFNGPNKQRYRSLMFNLKDDHNTDFRRRVLLGQVQPERIADL 301
Query: 283 SSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQ 342
+ EM SD +R+L + +E+A + +GG P + ++ CGRCG +KTT +
Sbjct: 302 TPTEMASD-TRKLENKKIEEKAL--FECERGG--APKATTDQFKCGRCGQRKTTYYQLQT 356
Query: 343 NSS----AKRIKCLNCYQYWE 359
S+ + C+NC +W+
Sbjct: 357 RSADEPMTTFVTCVNCNNHWK 377
>gi|23617251|dbj|BAC20918.1| putative transcription elongation factor [Oryza sativa Japonica
Group]
gi|125599607|gb|EAZ39183.1| hypothetical protein OsJ_23609 [Oryza sativa Japonica Group]
Length = 373
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 123/381 (32%), Positives = 203/381 (53%), Gaps = 32/381 (8%)
Query: 1 MEKEVMELCEAAKRRAETAASAEGEL--------EEAQCIAALDQLHKSSITCQLLVSTQ 52
ME+E++E EAA++ A+ A E A+C+ AL +L + +T LVSTQ
Sbjct: 1 MERELLEAFEAARKAADAVGEAAAAAGAGEGESPEAARCVDALRRLRGARVTTAALVSTQ 60
Query: 53 LVRHLLPLTKHPRQKIQDTASELILSWRSLFLEQMKGDEENGSFAICGEIKSANVEIAKG 112
+ R + LTKHP I+ TAS+L+ W+ + +E+ D++NG+ G+ S V++ K
Sbjct: 61 IGRRIRYLTKHPHSSIKATASDLLGHWKKVVIEE---DKKNGALQ-NGKSSSTVVKVEKV 116
Query: 113 K-RQITSDEFEQALDVEVVKVRRVDQKGAPRSKKLVGSEFIVTE-ETNSLDNVDAEAIRE 170
+ ++ ++ + R V+ KG + +K +E + + V +
Sbjct: 117 EPMKVEKASPRATVNNNNMDTRVVNHKGG-KVEKFSNAELRTQSIKVEKVQKVVHKVSSV 175
Query: 171 EKPASAVV-PQKLVSMIKCNDYFRERIREKLYKALSKVSGEVD----EEVQD---KLNGC 222
EKP+ P +L S++KC D R+RIR L A S+VS E EEV++ ++ C
Sbjct: 176 EKPSPVQGGPPRLTSVVKCGDASRDRIRAILGDAFSRVSEETRKDDREEVRNIIEEVKAC 235
Query: 223 DPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKM 282
DP R+A+ E +F+K G+ G + +YRS++FNL D N DFRR+VLLG V+PE + +
Sbjct: 236 DPFRIAVMVECALFQKLGNFNGPNKQRYRSLMFNLKDDHNTDFRRRVLLGQVQPERIADL 295
Query: 283 SSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQ 342
+ EM SD +R+L + +E+A + +GG P + ++ CGRCG +KTT +
Sbjct: 296 TPTEMASD-TRKLENKKIEEKAL--FECERGG--APKATTDQFKCGRCGQRKTTYYQLQT 350
Query: 343 NSS----AKRIKCLNCYQYWE 359
S+ + C+NC +W+
Sbjct: 351 RSADEPMTTFVTCVNCNNHWK 371
>gi|125557745|gb|EAZ03281.1| hypothetical protein OsI_25427 [Oryza sativa Indica Group]
Length = 373
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 123/381 (32%), Positives = 203/381 (53%), Gaps = 32/381 (8%)
Query: 1 MEKEVMELCEAAKRRAETAASAEGEL--------EEAQCIAALDQLHKSSITCQLLVSTQ 52
ME+E++E EAA++ A+ A E A+C+ AL +L + +T LVSTQ
Sbjct: 1 MERELLEAFEAARKAADAVGEAAAAAGAGEGESPEAARCVDALRRLRGARVTTAALVSTQ 60
Query: 53 LVRHLLPLTKHPRQKIQDTASELILSWRSLFLEQMKGDEENGSFAICGEIKSANVEIAKG 112
+ R + LTKHP I+ TAS+L+ W+ + +E+ D++NG+ G+ S V++ K
Sbjct: 61 IGRRIRYLTKHPHSSIKTTASDLLGHWKKVVIEE---DKKNGALQ-NGKSSSTVVKVEKV 116
Query: 113 K-RQITSDEFEQALDVEVVKVRRVDQKGAPRSKKLVGSEFIVTE-ETNSLDNVDAEAIRE 170
+ ++ ++ + R V+ KG + +K +E + + V +
Sbjct: 117 EPMKVEKASPRATVNNNNMDTRVVNHKGG-KVEKFSNAELRTQSIKVEKVQKVVHKVSSV 175
Query: 171 EKPASAVV-PQKLVSMIKCNDYFRERIREKLYKALSKVSGEVD----EEVQD---KLNGC 222
EKP+ P +L S++KC D R+RIR L A S+VS E EEV++ ++ C
Sbjct: 176 EKPSPVQGGPPRLTSVVKCGDASRDRIRAILGDAFSRVSEETRKDDREEVRNIIEEVQAC 235
Query: 223 DPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKM 282
DP R+A+ E +F+K G+ G + +YRS++FNL D N DFRR+VLLG V+PE + +
Sbjct: 236 DPFRIAVMVECPLFQKLGNFNGPNKQRYRSLMFNLKDDHNTDFRRRVLLGQVQPERIADL 295
Query: 283 SSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQ 342
+ EM SD +R+L + +E+A + +GG P + ++ CGRCG +KTT +
Sbjct: 296 TPTEMASD-TRKLENKKIEEKAL--FECERGG--APKATTDQFKCGRCGQRKTTYYQLQT 350
Query: 343 NSS----AKRIKCLNCYQYWE 359
S+ + C+NC +W+
Sbjct: 351 RSADEPMTTFVTCVNCNNHWK 371
>gi|37718881|gb|AAR01752.1| putative transcription elongation factor, 5'-partial [Oryza sativa
Japonica Group]
Length = 315
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 121/326 (37%), Positives = 180/326 (55%), Gaps = 36/326 (11%)
Query: 55 RHLLPLTKHPRQKIQDTASELILSWRSLFLEQMKGDEENGSFAICGEIKSANVEIAKGKR 114
+ L LTKHP IQ A++L+ W+ + +E+ K +NG+ G SA A+ +
Sbjct: 3 KRLRYLTKHPHSDIQSMATDLLGYWKKVVIEEGK---KNGTTENVGSTNSA--ARAEKAQ 57
Query: 115 QITSDEFEQALDVEVVKVRRVDQKG-APRSKKLVGSEFIVTEETNS----LDNVDAEAIR 169
+ D+ + V+ K R V+ +G P S K+ E I ++ + ++ EA R
Sbjct: 58 PMKVDKSSASGSVKPEK-REVNVRGQKPESIKV---EKITNNDSKNQQVKVERAPKEATR 113
Query: 170 E---EKPASAVV-PQKLVSMIKCNDYFRERIREKLYKALSKVSGEVD----EEVQ---DK 218
+KP+S P KL S++KCND R++IRE L A S+V GE EEV+ D+
Sbjct: 114 TPDTKKPSSVPNGPPKLTSLVKCNDPTRDKIRELLADAFSRVHGETSKDDREEVRNILDE 173
Query: 219 LNGCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEA 278
++ DP RVA+T ES +FE+ G S G ++ KYRSI+FNL N DFRR+VLLG V+PE
Sbjct: 174 VDARDPFRVAVTVESALFERLGRSTGAHKAKYRSIMFNLRADNNTDFRRRVLLGQVRPER 233
Query: 279 LIKMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNH 338
L+ +S EEM SD + N+QIK++ D +GG P + ++ CGRCG +KTT +
Sbjct: 234 LVDISPEEMASDARKLENKQIKEKALFD---CERGG--APKATTDQFKCGRCGQRKTTYY 288
Query: 339 GNDQNSSAKR-----IKCLNCYQYWE 359
Q SA + C+NC +W+
Sbjct: 289 -QLQTRSADEPMTTFVTCVNCNNHWK 313
>gi|414873584|tpg|DAA52141.1| TPA: hypothetical protein ZEAMMB73_289702 [Zea mays]
Length = 318
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 119/332 (35%), Positives = 175/332 (52%), Gaps = 48/332 (14%)
Query: 55 RHLLPLTKHPRQKIQDTASELILSWRSLFLEQM---KGDEEN-GSFAICGEIK------- 103
+ L PLTKHP IQ AS+L W+ + LE+ G EN S G+++
Sbjct: 6 KRLRPLTKHPHSGIQAVASDLFGYWKKVVLEETGKKNGSSENEKSMDSSGKVEKVRPMKV 65
Query: 104 ---SANVEIAKGKRQITSDEFEQALDVEVVKVRRVDQKGAPRSKKLVGSEFIVTEETNSL 160
SA+ + KR + D+ Q D VKV + G+ R++ + V++E N
Sbjct: 66 EKNSASASMKVEKRDV--DDRGQKPDN--VKVEKTASNGS-RTQSVKVER--VSKEVNRT 118
Query: 161 DNVDAEAIREEKPASAVV-PQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEE----- 214
D +KPAS P KL S++KCND R++IRE L +A +KV E +
Sbjct: 119 D--------AKKPASVPNGPPKLTSLVKCNDPTRDKIRELLAEAFAKVPRETSNDDRDEV 170
Query: 215 --VQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLG 272
+ D+++ CDP RVA+T ES +FE++G S G ++ KYRSI+FNL N DFRR+VL+G
Sbjct: 171 RNILDEVDACDPFRVAVTVESALFERFGRSTGAHKAKYRSIMFNLRAENNTDFRRRVLIG 230
Query: 273 HVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGH 332
V PE L +S +EM SD ++ N QIK++ D +G P + ++ CGRCG
Sbjct: 231 QVTPERLPDISPDEMASDARKQENLQIKEKALFD---CERGA--APKATTDQFKCGRCGQ 285
Query: 333 KKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
+KTT + Q SA + C+NC +W+
Sbjct: 286 RKTTYY-QLQTRSADEPMTTFVTCVNCNNHWK 316
>gi|168033194|ref|XP_001769101.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679630|gb|EDQ66075.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 375
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 115/385 (29%), Positives = 187/385 (48%), Gaps = 41/385 (10%)
Query: 2 EKEVMELCEAAKRRAETAASAEGEL--EEAQCIAALDQLHKSSITCQLLVSTQLVRHLLP 59
E E++ L E A AE A S L EE +C AL + ++ +L+STQ+ + L
Sbjct: 3 EAELVSLFEKASNAAEKAVSDGAVLAAEEMRCQEALKAMGAVEVSTSILLSTQVGKRLRK 62
Query: 60 LTKHPRQKIQDTASELILSWRSLFLEQM---KGDEENGSFAICGEIKSANVEIAKGKRQI 116
LTKH KI +A +L+ W+ + ++ G + S I E K+++
Sbjct: 63 LTKHQSSKISGSAQQLLEKWKKVVADEAAIKSGTSKEVSPTIKPETPGRTPPATVVKKEV 122
Query: 117 TSDEFEQALDVEVVKVRRVDQKGAPRSKKLVGSEFIVTEETNSLDNVDAEAIREEKPA-- 174
++ + V K R D K A S K+ E + ++ + A+ + PA
Sbjct: 123 KTE-----VKVYTSKTSRADTKNAVPSPKV---ESTNVSPSPRVETKNVRAMPQPHPAGK 174
Query: 175 --SAVVPQ-------------KLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKL 219
+ + P K+ ++ K D R+R RE L +A K EV +E +
Sbjct: 175 SATPLAPHTANGTANGSGFQPKVGNLTKAGDSTRDRFREFLIEAFKKCCSEVTDEHLAMV 234
Query: 220 NGCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEAL 279
D +RVA+ ES +F K G S G+ + KYRSI+FNL D NPDFRR++L+G +KPE +
Sbjct: 235 KKTDLVRVAVAVESALFSKLGQSKGSEKAKYRSIMFNLKDQNNPDFRRRILIGEIKPEEI 294
Query: 280 IKMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHG 339
M++++M SD ++ N+ I +E+A + G L + + ++ CG+CG +KTT +
Sbjct: 295 ANMTADDMASDARKKENESI-REKA---LFECERG-LQNVASTDQFRCGKCGQRKTT-YF 348
Query: 340 NDQNSSAKR-----IKCLNCYQYWE 359
Q SA ++C+NC W+
Sbjct: 349 QLQTRSADEPMTTFVQCVNCNARWK 373
>gi|255567202|ref|XP_002524582.1| transcription elongation factor s-II, putative [Ricinus communis]
gi|223536135|gb|EEF37790.1| transcription elongation factor s-II, putative [Ricinus communis]
Length = 337
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 111/368 (30%), Positives = 178/368 (48%), Gaps = 42/368 (11%)
Query: 1 MEKEVMELCEAAKRRAETAASAEGELEEAQCIAALDQLHKSSITCQLLVS---TQLVRHL 57
ME+++++L A + + +AA E++C+ AL +L IT +L S + R
Sbjct: 1 MEEQLVDLYTVAWKSSRSAAL------ESKCLNALSRLRCFPITFDVLASIPSVDVFRGF 54
Query: 58 LPLTKHPRQKIQDTASELILSWRSLFLEQMKGDEENGSFAICGEIKSANVEIAKGKRQIT 117
LTKHP KI D ++ +I +W L+Q+ E+ + S + +
Sbjct: 55 KALTKHPNMKIVDLSARVIAAWCKKLLKQLHRYEDY--------VSSIQKQPCTRTTAPS 106
Query: 118 SDEFEQALDVEVVKVRRVDQKGAPRSKKLVGSEFIVTEETNSLDNVDAEAIREEKPASAV 177
D+ Q + V K ++D PR+ K + + + + I P S
Sbjct: 107 KDQTSQVV-ATVPKEAKIDINANPRTVKALK---VQNKSFKKVSRTQTPKILTPHPHS-- 160
Query: 178 VPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFE 237
K S+ K ++ RE IRE++ +ALS V +E D L CDPI++A + ES +F
Sbjct: 161 ---KAASIPKSSNSLRESIREQISQALSMV---FNEAKHDTLKTCDPIQIAASLESALFV 214
Query: 238 KWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQ 297
KWG S KYRS+LFN+ DP+NPDFRRK+L+G +K E + +M + +M SD +R NQ
Sbjct: 215 KWGVSNTRSRTKYRSLLFNIKDPKNPDFRRKILVGEIKAEEVAEMDAGQMASDEMQRKNQ 274
Query: 298 QIKKERASDRYLPWKGGYLGPIYHST--RYMCGRCGHKKTTNHGNDQNSS----AKRIKC 351
I+ + WK +G T ++ CG+CG K+TT + S+ + C
Sbjct: 275 GIQAKSL------WK-CIVGREQEGTTDQFKCGKCGEKRTTYYQMQTRSADEPMTTYVTC 327
Query: 352 LNCYQYWE 359
C +W+
Sbjct: 328 TICDNHWK 335
>gi|413932649|gb|AFW67200.1| hypothetical protein ZEAMMB73_561219 [Zea mays]
Length = 246
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 84/217 (38%), Positives = 123/217 (56%), Gaps = 24/217 (11%)
Query: 160 LDNVDAEAIR---EEKPASAVVPQ---KLVSMIKCNDYFRERIREKLYKALSKVSGEVDE 213
++ V E IR ++PAS VP KL S++KCND R++IRE L +A VS E +
Sbjct: 35 VERVSKEVIRTPDSKRPAS--VPNGHPKLTSLVKCNDPTRDKIRELLAEAFVSVSRETSD 92
Query: 214 E-------VQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFR 266
+ + D++ CDP RVA+T ES +FE+ G S GT+ KYRSI+FNL N DFR
Sbjct: 93 DDRDEVKNILDEVEACDPYRVAVTVESALFERLGPSTGTHRAKYRSIMFNLRAENNTDFR 152
Query: 267 RKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYM 326
R+VL+G V PE L + +EM SD ++ N QIK++ D +G P + ++
Sbjct: 153 RRVLIGLVAPERLPDIPPDEMASDARKQENMQIKEKALFD---CERGA--APKATTDQFK 207
Query: 327 CGRCGHKKTTNHGNDQNSSAKR----IKCLNCYQYWE 359
C RCG +KTT + S+ + + C+NC +W+
Sbjct: 208 CARCGQRKTTYYQLQTRSADEPMTTFVTCVNCNNHWK 244
>gi|383138603|gb|AFG50480.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138604|gb|AFG50481.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138605|gb|AFG50482.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138606|gb|AFG50483.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138607|gb|AFG50484.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138608|gb|AFG50485.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138609|gb|AFG50486.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138610|gb|AFG50487.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138611|gb|AFG50488.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138612|gb|AFG50489.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138613|gb|AFG50490.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138614|gb|AFG50491.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138615|gb|AFG50492.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138616|gb|AFG50493.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138617|gb|AFG50494.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138618|gb|AFG50495.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138619|gb|AFG50496.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
Length = 137
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 63/109 (57%), Positives = 82/109 (75%)
Query: 179 PQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEK 238
P KL SMIKCND R++ RE LY+ALSKV+ E + E ++N CDP+R+A++ E++MFEK
Sbjct: 28 PPKLTSMIKCNDALRDKFREILYEALSKVASEAEGEDLARVNACDPVRIAVSVETVMFEK 87
Query: 239 WGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEM 287
G S G + KYRSI+FNL D NPD RR+VLLG +KPE LI M++EEM
Sbjct: 88 LGRSNGAQKFKYRSIMFNLKDGNNPDLRRRVLLGQIKPEKLIVMTAEEM 136
>gi|147860975|emb|CAN82941.1| hypothetical protein VITISV_013128 [Vitis vinifera]
Length = 326
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 101/322 (31%), Positives = 157/322 (48%), Gaps = 67/322 (20%)
Query: 42 SITCQLLVSTQLVRHLLPLTKHPRQKIQDTASELILSWRSLFLEQMKGDEENGSFAICGE 101
S T Q ++ + + L LTKHP +KIQ AS+LI W+++ +E+ +++NG
Sbjct: 53 SETKQRVIDILVGKRLRTLTKHPTKKIQALASDLIDIWKNIVIEETTKNKKNG------- 105
Query: 102 IKSANVEIAKGKRQITSDEFEQALDVEVVKVRRVDQKGAPRSKKLVGSEFIVTEETNSLD 161
++E + + +T++ E ++KV + + V ++T+ +
Sbjct: 106 ----DLEDKESPKPVTANP-ENVKATPLLKVSKAEN-------------IKVEKQTSGV- 146
Query: 162 NVDAEAIREEKPASAVV-PQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLN 220
+KP+ +V P KL S+ KCND R+++RE L +ALSKV GE DE++ D +N
Sbjct: 147 ---------KKPSHNIVGPPKLTSISKCNDALRDKVRELLSEALSKVVGEADEDIMDAVN 197
Query: 221 GCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALI 280
CDPIRVA+ + D +NPD RRKVLLG V PE L+
Sbjct: 198 ACDPIRVAVFSG--------------------------DAKNPDLRRKVLLGQVMPERLL 231
Query: 281 KMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGN 340
+M EEM SD + NQQIK++ D L P + ++ CGRCG +KTT +
Sbjct: 232 EMGPEEMASDRRQLENQQIKEKALFDCEL-----GAAPKATTDQFKCGRCGQRKTTYYQL 286
Query: 341 DQNSSAKRIKCLNCYQYWESTT 362
S+ + + Y S T
Sbjct: 287 QTRSADEPMTTFVTRSYRPSVT 308
>gi|361067733|gb|AEW08178.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
Length = 137
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 63/109 (57%), Positives = 81/109 (74%)
Query: 179 PQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEK 238
P KL SMIKCND R++ RE LY+ALSKV E + E ++N CDP+R+A++ E++MFEK
Sbjct: 28 PPKLTSMIKCNDALRDKFREILYEALSKVVSEAEGEDLARVNACDPVRIAVSVETVMFEK 87
Query: 239 WGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEM 287
G S G + KYRSI+FNL D NPD RR+VLLG +KPE LI M++EEM
Sbjct: 88 LGRSNGAQKFKYRSIMFNLKDGNNPDLRRRVLLGQIKPEKLIVMTAEEM 136
>gi|297736471|emb|CBI25342.3| unnamed protein product [Vitis vinifera]
Length = 302
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/241 (36%), Positives = 131/241 (54%), Gaps = 55/241 (22%)
Query: 1 MEKEVMELCEAAKRRAETAASAEG-ELEEAQCIAALDQLHKSSITCQLLVSTQLVRHLLP 59
MEKE++EL EA K+ A+ AA G EE +C+ AL QL +T Q+LVSTQ+ + L
Sbjct: 1 MEKELLELFEATKKAADAAAVNSGAPSEEERCLDALKQLKDFPVTYQVLVSTQVGKRLRT 60
Query: 60 LTKHPRQKIQDTASELILSWRSLFLEQMKGDEENGSFAICGEIKSANVEIAKGKRQITSD 119
LTKHP +KIQ AS+LI W+++ +E+ +++NG ++E + + +T++
Sbjct: 61 LTKHPTKKIQALASDLIDIWKNIVIEETTKNKKNG-----------DLEDKESPKPVTAN 109
Query: 120 EFEQALDVEVVKVRRVDQKGAPRSKKLVGSEFIVTEETNSLDNVDAEAIREEKPASAVV- 178
+NV A + KP+ +V
Sbjct: 110 P----------------------------------------ENVKATPLL--KPSHNIVG 127
Query: 179 PQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEK 238
P KL S+ KCND R+++RE L +ALSKV GE DE++ D +N CDPIRVA++ ES+MFEK
Sbjct: 128 PPKLTSISKCNDALRDKVRELLSEALSKVVGEADEDIMDAVNACDPIRVAVSVESVMFEK 187
Query: 239 W 239
W
Sbjct: 188 W 188
>gi|224137638|ref|XP_002322607.1| predicted protein [Populus trichocarpa]
gi|222867237|gb|EEF04368.1| predicted protein [Populus trichocarpa]
Length = 333
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 83/117 (70%)
Query: 186 IKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGT 245
+KC+D R ++R L ++L +V+ EV E++ + + DPI VA ESLMFE+ G GT
Sbjct: 197 VKCSDGLRSKVRHILVESLCRVAKEVKEDLMEAVRLRDPIIVAADVESLMFERMGLFNGT 256
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKE 302
++KYRSILFN+ DP+NPD RRKVLLG +KPE L+ M++EEM S+ + N QI+K+
Sbjct: 257 KQLKYRSILFNMKDPKNPDLRRKVLLGQIKPEKLVTMTAEEMASNQRQFENDQIRKK 313
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 53/86 (61%), Gaps = 3/86 (3%)
Query: 1 MEKEVMELCEAAKRRAETAASAEGELEEA-QCIAALDQLHKSSITC-QLLVSTQLVRHLL 58
MEK+ + L E+AK+ A A++ E +C+ ALDQL + +T ++LVST + + +
Sbjct: 1 MEKQFLSLFESAKKSAAIVATSASIFPEVYRCLDALDQLKRFPVTSSRVLVSTPVAKEVQ 60
Query: 59 PLTKHPRQKIQDTASELILSW-RSLF 83
LTKH + I+ AS L+ +W R+L+
Sbjct: 61 YLTKHRVKMIRTAASCLLDAWSRNLY 86
>gi|302757165|ref|XP_002962006.1| hypothetical protein SELMODRAFT_437865 [Selaginella moellendorffii]
gi|302775328|ref|XP_002971081.1| hypothetical protein SELMODRAFT_441410 [Selaginella moellendorffii]
gi|300161063|gb|EFJ27679.1| hypothetical protein SELMODRAFT_441410 [Selaginella moellendorffii]
gi|300170665|gb|EFJ37266.1| hypothetical protein SELMODRAFT_437865 [Selaginella moellendorffii]
Length = 303
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 160/361 (44%), Gaps = 72/361 (19%)
Query: 4 EVMELCEAAKRRAETAASAEGELEEAQCIAALDQLHKSSITCQLLVSTQLVRHLLPLTKH 63
++ EL + A+ A+ A + EG EE +C+ AL + +T LL+STQ+ + L LTKH
Sbjct: 8 QLTELFKTAQSAAQKATAVEG-AEEDRCVEALQAMRSLRVTTSLLMSTQVGKQLRKLTKH 66
Query: 64 PRQKIQDTASELILSWRSLFLEQMKGDEENGSFAICGEIKSANVEIAKGKRQITSDEFEQ 123
R KI+ A +++ W+ ++ E + G SAN + KGK
Sbjct: 67 SRPKIRSIAVDILEDWK-----KVVSSEASSKSKAEGPKSSANASVEKGK---------- 111
Query: 124 ALDVEVVKVRRVDQKGAPRSKKLVGSEFIVTEETNSLDNVDAEAIREEKPASAVVPQKLV 183
+ ++++N + A + + A+
Sbjct: 112 ----------------------------VSSKQSNGNSSSKARPLPKSNDAT-------- 135
Query: 184 SMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSF 243
D RE + E A KV E + + + N DP++VA+ E+ +F K +
Sbjct: 136 -----RDKMREVLLE----AFQKVPQEAEGQELARANAKDPVQVAVEVENALFSKLESTK 186
Query: 244 GTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKER 303
+ KYRSI+FNL DP NPD RR++LLG + L MS+E+M SD + N+QIK
Sbjct: 187 VDKKAKYRSIVFNLKDPNNPDLRRRLLLGQISGSQLTTMSAEDMASDQRKAENKQIK--- 243
Query: 304 ASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYW 358
D+ L + + ++ CG+CG ++ T + Q SA + C+NC W
Sbjct: 244 --DKALFECERGMKQEATTDQFKCGKCGRRECT-YFQKQTRSADEPMTTYVTCVNCNNRW 300
Query: 359 E 359
+
Sbjct: 301 K 301
>gi|224094063|ref|XP_002334806.1| predicted protein [Populus trichocarpa]
gi|222875111|gb|EEF12242.1| predicted protein [Populus trichocarpa]
Length = 333
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/117 (48%), Positives = 83/117 (70%)
Query: 186 IKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGT 245
+KC+D R ++R L ++L +V+ EV E++ + + DPI VA ESLMFE+ G GT
Sbjct: 197 VKCSDGLRSKVRHILVESLCRVAKEVKEDLMEAVRLRDPIIVAADVESLMFERMGLFNGT 256
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKE 302
++KYRSILFN+ DP+NPD RRK+LLG +KPE L+ M++EEM S+ + N QI+K+
Sbjct: 257 KQLKYRSILFNMKDPKNPDLRRKLLLGQIKPEKLVTMTAEEMASNQRQFENDQIRKK 313
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 53/86 (61%), Gaps = 3/86 (3%)
Query: 1 MEKEVMELCEAAKRRAETAASAEGELEEA-QCIAALDQLHKSSITC-QLLVSTQLVRHLL 58
MEK+ + L E+AK+ A A++ E +C+ ALDQL + +T ++LVST + + +
Sbjct: 1 MEKQFLSLFESAKKSAAIVATSASIFPEVYRCLDALDQLKRFPVTSSRVLVSTPVAKEVQ 60
Query: 59 PLTKHPRQKIQDTASELILSW-RSLF 83
LTKH + I+ AS L+ +W R+L+
Sbjct: 61 YLTKHRVKMIRTAASCLLDAWSRNLY 86
>gi|224086771|ref|XP_002307957.1| predicted protein [Populus trichocarpa]
gi|222853933|gb|EEE91480.1| predicted protein [Populus trichocarpa]
Length = 412
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 79/115 (68%)
Query: 186 IKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGT 245
+KC+D R ++R L ++L++V+ E + ++ ++ DPI VA ES+MF+K G G
Sbjct: 275 VKCDDALRGKVRSILVESLTRVAKETEAGLRRAVSSRDPICVAADVESVMFQKMGAFNGA 334
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIK 300
VKYRS+LFNL DP+NPD RRKVLLG +KPE L+ M+SEEM S+ + N QI+
Sbjct: 335 KTVKYRSVLFNLKDPKNPDLRRKVLLGQIKPEKLVTMTSEEMASNHRQFENAQIR 389
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Query: 1 MEKEVMELCEAAKRRAETAASAEGELEEA-QCIAALDQLHK-SSITCQLLVSTQLVRHLL 58
ME++ + L E+AK A+ A ++ + E +C+AAL QL + I+ ++L+ T + + +
Sbjct: 1 MEQQFLSLFESAKTSADAAVTSSSMIPEVHRCLAALGQLKRFPVISSRVLLFTPVAKQVE 60
Query: 59 PLTKHPRQKIQDTASELILSWR 80
LT+HP + I+ AS L+ +WR
Sbjct: 61 CLTRHPVKMIKTAASCLLYTWR 82
>gi|168041433|ref|XP_001773196.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675555|gb|EDQ62049.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 353
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 102/184 (55%), Gaps = 11/184 (5%)
Query: 181 KLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWG 240
K+ + K D R+R RE L A K E+ +E + D ++V + E+++F K G
Sbjct: 174 KIGHLPKSGDPNRDRFRELLLDAFKKCCSELTDEHSKIVKSTDFVKVTLAVETVLFSKLG 233
Query: 241 HSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIK 300
G + KYRSILFNL D NPDFRR+VL+G +K E ++ M++++M SD ++ N+ I
Sbjct: 234 LFNGKEKAKYRSILFNLKDQNNPDFRRRVLMGEIKSEEIVNMTADDMASDARKKENEVI- 292
Query: 301 KERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCY 355
+E+A + G + + + ++ CG+CG +KTT + Q SA + C+NC
Sbjct: 293 REKA---LFECERG-MQNVASTDQFRCGKCGQRKTT-YFQLQTRSADEPMTTFVTCVNCN 347
Query: 356 QYWE 359
W+
Sbjct: 348 ARWK 351
>gi|255567144|ref|XP_002524553.1| transcription elongation factor s-II, putative [Ricinus communis]
gi|223536106|gb|EEF37761.1| transcription elongation factor s-II, putative [Ricinus communis]
Length = 152
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 86/155 (55%), Gaps = 13/155 (8%)
Query: 211 VDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVL 270
+E D L CDPI++A + ES +F KWG S KYRS+LFN+ DP+NPDFRRK+L
Sbjct: 3 FNEAKHDTLKTCDPIQIAASLESALFVKWGVSNTRSRTKYRSLLFNIKDPKNPDFRRKIL 62
Query: 271 LGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHST--RYMCG 328
+G +K E + +M + +M SD +R NQ I+ + WK +G T ++ CG
Sbjct: 63 VGEIKAEEVAEMDAGQMASDEMQRKNQGIQAKSL------WK-CIVGREQEGTTDQFKCG 115
Query: 329 RCGHKKTTNHGNDQNSS----AKRIKCLNCYQYWE 359
+CG K+TT + S+ + C C +W+
Sbjct: 116 KCGEKRTTYYQMQTRSADEPMTTYVTCTICDNHWK 150
>gi|15227992|ref|NP_181801.1| F-box protein [Arabidopsis thaliana]
gi|4512680|gb|AAD21734.1| hypothetical protein [Arabidopsis thaliana]
gi|330255067|gb|AEC10161.1| F-box protein [Arabidopsis thaliana]
Length = 737
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 82/126 (65%), Gaps = 4/126 (3%)
Query: 184 SMIKCNDYFRERIREKLYKALSKVSGE-VDEEVQDKLNGCDPIRVAITAESLMFEKWGHS 242
+M K D R+++RE L +L KV+ E VD E++ ++ CDP VA++ ES MFEK G
Sbjct: 598 TMKKTGDSKRDKVREILQTSLVKVASEIVDTEMKTRVTACDPSVVAVSVESAMFEKLGCF 657
Query: 243 FGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKE 302
G ++ KYRSILFN+ D NPD RRKVL+G + E L+ M +EM GS ++ +++++
Sbjct: 658 MGPHKAKYRSILFNMGDSNNPDLRRKVLIGEINGERLVTMERQEM---GSEKIQKEVQRI 714
Query: 303 RASDRY 308
+ + R+
Sbjct: 715 KENARF 720
>gi|15233998|ref|NP_193607.1| Transcription factor IIS protein [Arabidopsis thaliana]
gi|4539391|emb|CAB37457.1| putative protein [Arabidopsis thaliana]
gi|7268666|emb|CAB78874.1| putative protein [Arabidopsis thaliana]
gi|332658681|gb|AEE84081.1| Transcription factor IIS protein [Arabidopsis thaliana]
Length = 266
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/125 (44%), Positives = 78/125 (62%), Gaps = 2/125 (1%)
Query: 166 EAIREEKPASAVVPQKLVSMIKCNDYFRERIREKLYKALSKVSGEV-DEEVQDKLNGCDP 224
E R+ + A+ +P +M K D R+++RE L +L+KV+ EV D E++ ++ CDP
Sbjct: 92 EKSRDNREAAVKIPTH-ATMKKTGDSKRDKVREILQTSLAKVASEVVDTEMKTRVTACDP 150
Query: 225 IRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSS 284
VA++ E+ MFE G G + KYRSILFN+ D NPD RRKVLLG + E L+KM
Sbjct: 151 WVVAVSVETAMFENLGCFMGPQKAKYRSILFNMGDSNNPDLRRKVLLGEISGERLVKMEK 210
Query: 285 EEMVS 289
EEM S
Sbjct: 211 EEMGS 215
>gi|391331678|ref|XP_003740270.1| PREDICTED: transcription elongation factor S-II-like [Metaseiulus
occidentalis]
Length = 288
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 96/191 (50%), Gaps = 19/191 (9%)
Query: 144 KKLVGSEFIVTEETNSLDNVDAEAIREEKPASAVVPQKLVSMIKCN--DYFRERIREKLY 201
KKL+GS E+++S ++ + + PA V P K S N D R + RE L
Sbjct: 78 KKLIGSTPTRAEDSSSRESRENKKSSTTPPARPV-PAKQTSFPAGNTTDAVRLKCREMLS 136
Query: 202 KALSKVSGEVDEEVQDKLNGC--DPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMD 259
AL K +G D GC DP +A ES F+++ ++ Y + RS + NL D
Sbjct: 137 NAL-KGNGLPD--------GCAADPDELAERIESTCFDEFNNTDTKYRSRIRSRVANLKD 187
Query: 260 PENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPI 319
P+NP+ R VL+G +KPE L KM++EEM SD ++L Q++ KE D + G +
Sbjct: 188 PKNPNLRLGVLIGSIKPERLAKMTAEEMASDELKQLRQKLTKEAIDDHQMALTSGTKTDL 247
Query: 320 YHSTRYMCGRC 330
CG+C
Sbjct: 248 LK-----CGKC 253
>gi|388501372|gb|AFK38752.1| unknown [Medicago truncatula]
Length = 204
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 113/208 (54%), Gaps = 29/208 (13%)
Query: 5 VMELCEAAKRRAETAASAEGE-LEEAQCIAALDQLHKSSITCQLLVSTQLVRHLLPLTKH 63
++EL EAAK+ A+ + S + EE +C+ AL+QL + ++LV+TQ+ +HL LTKH
Sbjct: 9 LVELYEAAKKAADASTSTDNSPSEETRCLDALEQLKNFPVNYKILVNTQVGKHLKTLTKH 68
Query: 64 PRQKIQDTASELILSWRSLFLEQMKGDEENGSFAICGEIKSANVEIAK-GKRQIT-SDEF 121
PR+ I+ A +LI W+ + +++ +N + A +++S N E AK GK Q + S +
Sbjct: 69 PRENIRAFAVDLIAIWKDVIIKET---SKNKNGASDSKVESTNGERAKAGKLQKSPSVKV 125
Query: 122 EQALDVEVVKVRRVDQKGAPRSKKLVGSEF------IVTEETNSLDNVDAEAIREEKP-- 173
E+ E KV +V+ G S KL + E+T+ N+ A +EEKP
Sbjct: 126 EKG---ESAKVEKVNGNG---SSKLSSGNVKAQNVDVKIEKTDRTSNIKA---KEEKPVS 176
Query: 174 ------ASAVVPQKLVSMIKCNDYFRER 195
+SA P KL +MIK ND R++
Sbjct: 177 AAKKISSSAAAPPKLKTMIKSNDSARDK 204
>gi|303290875|ref|XP_003064724.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226453750|gb|EEH51058.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 325
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 84/176 (47%), Gaps = 15/176 (8%)
Query: 189 NDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEV 248
D R+R RE L +A+++ G D + D + AI E+ M +W + Y+
Sbjct: 158 GDPLRDRTRELLAEAIAQAIGAPDVYASVE----DVAQTAIAIENAMHAQWSDTGKEYKA 213
Query: 249 KYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRY 308
K+R + FNL DP+NPD RR V G + P L+ +S EE+ SD R N +I++ ++
Sbjct: 214 KFRQLSFNLKDPKNPDLRRSVADGLISPAVLLDLSPEELGSDERRNSNAKIREHATNEAV 273
Query: 309 LPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
K + + CG+C +K T + Q SA + C+NC W+
Sbjct: 274 RGQK-----KEASTDAFKCGKCKQRKCTYY-QLQTRSADEPMTTFVTCVNCDNRWK 323
>gi|159474128|ref|XP_001695181.1| predicted protein [Chlamydomonas reinhardtii]
gi|158276115|gb|EDP01889.1| predicted protein [Chlamydomonas reinhardtii]
Length = 348
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 148/369 (40%), Gaps = 73/369 (19%)
Query: 20 ASAEGE-LEEAQCIAALDQLHKSSITCQLLVSTQLVRHLLPLTKHPRQKIQDTASELILS 78
+A+G+ EEA+ + L QL + +T LL T + L KH + +A + +
Sbjct: 22 GAADGDKAEEARMLDVLKQLQRRGVTADLLKRTNAGKRLNKFCKHASDAVSKSAKAAVEA 81
Query: 79 WRSLFLEQMK--GDEENGSFAICGEIKSANVEIAKGKRQITSDEFEQALDVEVVKVRRVD 136
W+ ++ GD G + + AN A G+ Q L
Sbjct: 82 WKQCVKKETADGGDTAEGGASQPAKAPMANDSAAGGREG-------QPLAGASAAPASGT 134
Query: 137 QKGAPRSKKLVGSEFIVTEETNSLDNVDAEAIREEKPASAVVPQKLVSMIKCNDYFRERI 196
G RS S+ ++T + SA V +C + R+++
Sbjct: 135 SGGGLRSAG--SSQQLLTRQP-----------------SASSSGFSVDPPRCGNETRDKV 175
Query: 197 REKLYKALS------------------KVSGEVDEEVQDKLNGCDPI---RVAITAESLM 235
R L +AL+ ++ ++E + D + G R A++AE
Sbjct: 176 RSMLAEALAVGYVGGGDTGPSSLQSPNQLGAAIEEALYDLMGGGGGGGGGREAVSAE--- 232
Query: 236 FEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRL 295
Y+ K RS+ FNL D +NPD R +VL G V PE L+++S+EEM SD ++
Sbjct: 233 ----------YKAKARSLCFNLKDAKNPDLRERVLSGSVPPETLVRLSAEEMASDEQKKK 282
Query: 296 NQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IK 350
N+++K+ A + G + + CGRC +K T + Q SA +
Sbjct: 283 NRELKEWLAKEAVR----GATTNAATTDMFQCGRCKQRKCTYY-QLQTRSADEPMTTFVT 337
Query: 351 CLNCYQYWE 359
C NC Q W+
Sbjct: 338 CTNCGQRWK 346
>gi|156359678|ref|XP_001624893.1| predicted protein [Nematostella vectensis]
gi|156211698|gb|EDO32793.1| predicted protein [Nematostella vectensis]
Length = 300
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 87/176 (49%), Gaps = 19/176 (10%)
Query: 189 NDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEV 248
++ R + RE + +L +V GE + + P VA E L+FE++ + Y+
Sbjct: 137 DESVRGKCREMIVNSL-QVQGEFEAVTK-------PEEVAAACEQLIFEEFKDTNVKYKQ 188
Query: 249 KYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRY 308
+ RS + NL DP+NP + +VL G + P L M+SEEM SD ++L Q+ KE +
Sbjct: 189 RIRSRVNNLRDPKNPMLKVRVLGGEISPARLAVMTSEEMASDEMKKLRQEFTKEGIREAQ 248
Query: 309 LPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
+ G + + CGRCG ++TT + Q SA + C+NC W+
Sbjct: 249 MAKNAG-----TKTNLFKCGRCGKRETT-YNQLQTRSADEPMTTFVYCMNCGNRWK 298
>gi|302831355|ref|XP_002947243.1| hypothetical protein VOLCADRAFT_116341 [Volvox carteri f.
nagariensis]
gi|300267650|gb|EFJ51833.1| hypothetical protein VOLCADRAFT_116341 [Volvox carteri f.
nagariensis]
Length = 304
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 87/178 (48%), Gaps = 22/178 (12%)
Query: 182 LVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGH 241
+V +C + R+++R L +AL+ ++D L+ L+
Sbjct: 147 IVDPPRCGNDTRDKVRVMLAEALAVGFNSGGAVIEDALH------------ELLAGSGSS 194
Query: 242 SFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKK 301
G Y+ K RS+ FNL D +NPD R +VL G + PE+L++MS+EE+ SD +R N+++K+
Sbjct: 195 VSGEYKAKARSLCFNLKDAKNPDLRERVLSGSIPPESLVRMSAEELASDEQKRKNREMKE 254
Query: 302 ERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKRIKCLNCYQYWE 359
A + +G + + + CGRC +K T + + C NC Q W+
Sbjct: 255 WLAKEAT---RG--VNNAATTDMFQCGRCKQRKCTYY-----PMTTFVTCTNCGQRWK 302
>gi|390348322|ref|XP_799219.3| PREDICTED: transcription elongation factor S-II-like
[Strongylocentrotus purpuratus]
Length = 306
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 85/177 (48%), Gaps = 19/177 (10%)
Query: 190 DYFRERIREKLYKALSKVSGEVD--EEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYE 247
D RER ++ L AL ++D EE+QD P +A E ++ ++G+S Y+
Sbjct: 140 DVVRERCKQMLVNALKVAIPDLDDGEELQD------PEELAGIIEDCIYTEFGNSDLRYK 193
Query: 248 VKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDR 307
+ RS + NL D +NPD RR VL G + E + M++EEM S+ +++ Q+ KE +D
Sbjct: 194 NRVRSRVSNLQDSKNPDLRRMVLRGTIPAEKIASMAAEEMASEAMKQMRQKFTKEAINDH 253
Query: 308 YLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
L G S CG+C KK + Q SA + C +C W+
Sbjct: 254 QLAHTEG-----TRSALLTCGKC-RKKNCTYNQMQTRSADEPMTTFVFCNDCGHRWK 304
>gi|443710452|gb|ELU04705.1| hypothetical protein CAPTEDRAFT_155099 [Capitella teleta]
Length = 309
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 101/225 (44%), Gaps = 37/225 (16%)
Query: 155 EETNSLDNVDAEAIREEKPASAVVPQKLVS--------------MIKCNDYFRERIREKL 200
E++NS D++ A PA + P L S + +D R + RE L
Sbjct: 100 EDSNSKDSMPAS--EPPTPAESSTPPDLSSDAAPRLRRMSSSAEVDDTSDPVRIKCRELL 157
Query: 201 YKALSKVSGEVDEEVQDKLNGCDP-IRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMD 259
KAL + + GC P +A E ++ ++ ++ Y+ + RS + NL D
Sbjct: 158 TKAL---------QTPPEKEGCAPACELAAGIEQSIYNEFKNTEMKYKTRVRSRVANLRD 208
Query: 260 PENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPI 319
+NP R V+ G + PE + M+SEEM SD ++L ++ KE +D + +GG
Sbjct: 209 SKNPKLREGVMYGFIPPERMASMTSEEMASDDLKKLREKFTKEAINDHQMAQQGG----- 263
Query: 320 YHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
+ + CGRCG K+ + Q SA + C++C W+
Sbjct: 264 TETDFFKCGRCG-KRRCQYNQVQTRSADEPMTTFVLCVSCGNRWK 307
>gi|297823711|ref|XP_002879738.1| hypothetical protein ARALYDRAFT_903050 [Arabidopsis lyrata subsp.
lyrata]
gi|297325577|gb|EFH55997.1| hypothetical protein ARALYDRAFT_903050 [Arabidopsis lyrata subsp.
lyrata]
Length = 107
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 61/112 (54%), Gaps = 13/112 (11%)
Query: 254 LFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASD--RYLPW 311
+FNL D NPD RR+VL G + PE LI +S+EEM SD ++ N QIK++ D R L
Sbjct: 1 MFNLRDGNNPDLRRRVLTGEISPEKLITLSAEEMASDKRKQENNQIKEKALFDCERGLAA 60
Query: 312 KGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSS----AKRIKCLNCYQYWE 359
K + ++ CGRCG +K T + S+ + C+NC +W+
Sbjct: 61 KAS-------TDQFKCGRCGQRKCTYYQMQTRSADEPMTTYVTCVNCDNHWK 105
>gi|412992662|emb|CCO18642.1| predicted protein [Bathycoccus prasinos]
Length = 331
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 87/200 (43%), Gaps = 25/200 (12%)
Query: 170 EEKPASAVVPQKLVSMI-KCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVA 228
+EK A V + + S I + N+ R+R R+ + L+ E C+ I V
Sbjct: 143 DEKSALEQVQRTIASKIEQTNNATRDRSRDVIAYGLALAHCE---------GNCEDISVT 193
Query: 229 ITA------ESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKM 282
A E M EKW Y+ K R + FN+ DP+NPD RR + + LI +
Sbjct: 194 SLARIVEEVEDAMSEKWKDLGKEYKAKLRQLAFNMKDPKNPDLRRAIAKREIDATTLIDL 253
Query: 283 SSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQ 342
SSEE+ SD R NQ I++ ++ + +T + CG+CG + T +
Sbjct: 254 SSEELGSDERRAANQSIREHAEAEAVRGQRKE-----ASTTAFKCGKCGQRACTFYQLQT 308
Query: 343 NSS----AKRIKCLNCYQYW 358
S+ + C+NC W
Sbjct: 309 RSADEPMTTFVTCVNCENRW 328
>gi|428183038|gb|EKX51897.1| hypothetical protein GUITHDRAFT_102510 [Guillardia theta CCMP2712]
Length = 298
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 104/243 (42%), Gaps = 44/243 (18%)
Query: 132 VRRVDQKGAPRSKKLVGSEFIVTEETNSLDNVDAEAIREEKPASAVVPQKLVSMIKCNDY 191
V R Q G+ + + ++ E +N + V +E +KPA V D
Sbjct: 80 VARSRQPGSSAAGQEKPNKSAAGEGSNGKEKVKSEDKVTKKPAEPV------------DG 127
Query: 192 FRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVKYR 251
R ++RE KA + GE D + +D ++ ES M+E +G + Y +
Sbjct: 128 KRLKVRELFEKAFADWKGESDVDRKD---------LSARIESAMYEHFGGANEQYLNHAK 178
Query: 252 SILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYLPW 311
S+ FNL DP+NPDFR KV+ G + E + K+SS +M G ++ Q KK D+
Sbjct: 179 SVKFNLSDPKNPDFRSKVIFGDIDAEEIPKLSSGQMA--GKDKIEQ--KKANKEDKIFQD 234
Query: 312 K----GGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR------------IKCLNCY 355
K G LG S + C +C K+TT + Q SA I C NC
Sbjct: 235 KMFITAGNLGA--ESDMFQCRKCKQKRTTFY-QKQTRSADEPMTAELPLLQVFITCKNCG 291
Query: 356 QYW 358
W
Sbjct: 292 HEW 294
>gi|226478976|emb|CAX72983.1| RNA polymerase II elongation factor [Schistosoma japonicum]
Length = 317
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 82/185 (44%), Gaps = 25/185 (13%)
Query: 183 VSMIKCNDYFRERIREKLYKALSK---VSGEVDEEVQDKLNGCDPIRVAITAESLMFEKW 239
V + ND R + RE L AL SG + E +AI ES +++ +
Sbjct: 148 VHTLTTNDQVRLKAREMLQSALESGNIPSGAYESEF-----------LAIRIESSIYDLF 196
Query: 240 GHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQI 299
++ Y+ + R+ + NL D NP+ R VL+GHV P+ L M+SEEM S + L ++
Sbjct: 197 NNTDPKYKQRVRTRVMNLRDSNNPNLRLNVLMGHVSPDKLASMTSEEMASKEMKELREKY 256
Query: 300 KKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNC 354
KE D + GG + CG+C K T + Q SA + C NC
Sbjct: 257 TKETIEDHQMAVTGGTETDLLR-----CGKCKQTKCT-YNQVQTRSADEPMTTFVYCNNC 310
Query: 355 YQYWE 359
W+
Sbjct: 311 GHRWK 315
>gi|297788910|ref|XP_002862485.1| hypothetical protein ARALYDRAFT_920656 [Arabidopsis lyrata subsp.
lyrata]
gi|297308027|gb|EFH38743.1| hypothetical protein ARALYDRAFT_920656 [Arabidopsis lyrata subsp.
lyrata]
Length = 107
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 60/112 (53%), Gaps = 13/112 (11%)
Query: 254 LFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASD--RYLPW 311
+FNL D NPD RR+VL G + PE LI +S+EEM SD ++ N IK++ D R L
Sbjct: 1 MFNLRDGNNPDLRRRVLTGEISPEKLITLSAEEMASDKRKQENNHIKEKALFDCERGLAA 60
Query: 312 KGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSS----AKRIKCLNCYQYWE 359
K + ++ CGRCG +K T + S+ + C+NC +W+
Sbjct: 61 KAS-------TEQFKCGRCGQRKCTYYQMQTRSADEPMTTYVTCVNCDNHWK 105
>gi|193786100|dbj|BAG51383.1| unnamed protein product [Homo sapiens]
Length = 272
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 78/175 (44%), Gaps = 18/175 (10%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVK 249
D R + RE L AL V G D +R++ E +F G++ Y+ +
Sbjct: 109 DAVRNKCREMLTAALQTDHDHV-------AIGADCVRLSAQIEECIFRDVGNTDMKYKNR 161
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYL 309
RS + NL D +NPD RR VL G + P+ + M+SEEM SD + + + + KE + +
Sbjct: 162 VRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIREHQM 221
Query: 310 PWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
GG + + CG+C KK + Q S+ + C C W+
Sbjct: 222 ARTGG-----TQTDLFTCGKC-RKKNCTYTQVQTRSSDEPMTTFVVCNECGNRWK 270
>gi|229367280|gb|ACQ58620.1| Transcription elongation factor A protein 1 [Anoplopoma fimbria]
Length = 310
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 80/176 (45%), Gaps = 18/176 (10%)
Query: 189 NDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEV 248
+D R + RE L AL + G D + E ++F+++ ++ Y+
Sbjct: 146 SDSIRIKCRELLANALQAGDDHI-------AIGADCDELGAQIEEVIFQEFKNTDMKYKN 198
Query: 249 KYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRY 308
+ RS + NL D +NP+ RR VL G V PE + KMS+EEM SD R + + + KE D
Sbjct: 199 RVRSRISNLKDMKNPNLRRTVLCGSVTPERMAKMSAEEMASDELREMRKNLTKEAVRDHQ 258
Query: 309 LPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
+ GG + + CG+C K T + Q SA + C C W+
Sbjct: 259 MATTGG-----TQTDLFTCGKCKGKCCT-YTQVQTRSADEPMTTFVFCNECGNRWK 308
>gi|22327517|ref|NP_680377.1| Transcription factor IIS protein [Arabidopsis thaliana]
gi|332007413|gb|AED94796.1| Transcription factor IIS protein [Arabidopsis thaliana]
Length = 233
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 72/125 (57%), Gaps = 23/125 (18%)
Query: 184 SMIKCNDYFRERIREKLYKALSKVSGEV-DEEVQDK-LNGCDPIRVAITAESLMFEKWGH 241
+M K D R+++ E L +L+KV+ EV D E++ + + CDP VA++ ES M
Sbjct: 108 TMKKTGDSKRDKVHEILQSSLAKVATEVVDTEMKRRVMTVCDPWVVAVSVESAM------ 161
Query: 242 SFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIK- 300
SILFN+ D NPD RRKVL+G + E L+KM +EM GS ++ ++++
Sbjct: 162 ----------SILFNMGDSNNPDLRRKVLIGEISGERLVKMEKDEM---GSEKIQKEVQR 208
Query: 301 -KERA 304
KERA
Sbjct: 209 IKERA 213
>gi|390462834|ref|XP_003732920.1| PREDICTED: transcription elongation factor A protein 2 [Callithrix
jacchus]
Length = 324
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 80/182 (43%), Gaps = 19/182 (10%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVK 249
D R + RE L AL V G D R++ E +F G++ Y+ +
Sbjct: 136 DAVRNKCREMLAIALQTDHDHV-------AIGADCKRLSAQIEECIFRDVGNTDMKYKNR 188
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYL 309
RS + NL D +NPD RR VL G + P+ + M+SEEM SD + + + + KE + +
Sbjct: 189 VRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIREHQM 248
Query: 310 PWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWESTTAL 364
GG + + CG+C KK + Q S+ + C C W+ L
Sbjct: 249 ARTGG-----TQTDLFTCGKC-RKKNCTYTQVQTRSSDEPMTTFVVCNECGNRWKP-VVL 301
Query: 365 YG 366
YG
Sbjct: 302 YG 303
>gi|402881938|ref|XP_003904513.1| PREDICTED: transcription elongation factor A protein 2 [Papio
anubis]
Length = 299
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 77/175 (44%), Gaps = 18/175 (10%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVK 249
D R + RE L AL V G D R++ E +F G++ Y+ +
Sbjct: 136 DAVRNKCREMLTAALQTAHDHV-------AIGADCQRLSAQIEECIFRDVGNTDMKYKNR 188
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYL 309
RS + NL D +NPD RR VL G + P+ + M+SEEM SD + + + + KE + +
Sbjct: 189 VRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIREHQM 248
Query: 310 PWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
GG + + CG+C KK + Q S+ + C C W+
Sbjct: 249 ARTGG-----TQTDLFTCGKC-RKKNCTYTQVQTRSSDEPMTTFVVCNECGNRWK 297
>gi|212536338|ref|XP_002148325.1| transcription elongation factor S-II [Talaromyces marneffei ATCC
18224]
gi|210070724|gb|EEA24814.1| transcription elongation factor S-II [Talaromyces marneffei ATCC
18224]
Length = 296
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 82/177 (46%), Gaps = 21/177 (11%)
Query: 189 NDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWG-HSFGTYE 247
N+ R+ +Y LS +S E + V K AI E+ F +G + Y+
Sbjct: 134 NNKTRDSCLGLMYDGLSFMSTESTKIVLTK---------AIAVEAAAFTSFGPETKEQYK 184
Query: 248 VKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDR 307
K RS+ NL + NP R++VL G V P+ + M+ +E+ SD R L+Q+I+KE
Sbjct: 185 TKIRSLFQNLKNKSNPQLRQRVLSGDVTPDKFVNMTHDELKSDERRALDQKIQKENMDKA 244
Query: 308 YLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
+ + S+ CG+CG +K T + Q SA CLNC + W+
Sbjct: 245 MVAQAERSI-----SSSLQCGKCGQRKVT-YTEAQTRSADEPMTLFCTCLNCGKSWK 295
>gi|383873107|ref|NP_001244428.1| transcription elongation factor A protein 2 [Macaca mulatta]
gi|380815990|gb|AFE79869.1| transcription elongation factor A protein 2 isoform a [Macaca
mulatta]
Length = 299
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 76/175 (43%), Gaps = 18/175 (10%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVK 249
D R + RE L AL V G D R++ E +F G++ Y+ +
Sbjct: 136 DAVRNKCREMLTAALQTAHDHV-------AIGADCQRLSAQIEECIFRDVGNTDMKYKNR 188
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYL 309
RS + NL D NPD RR VL G + P+ + M+SEEM SD + + + + KE + +
Sbjct: 189 VRSRISNLKDARNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIREHQM 248
Query: 310 PWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
GG + + CG+C KK + Q S+ + C C W+
Sbjct: 249 ARTGG-----TQTDLFTCGKC-RKKNCTYTQVQTRSSDEPMTTFVVCNECGNRWK 297
>gi|256071836|ref|XP_002572244.1| transcription elongation factor s-II [Schistosoma mansoni]
gi|360043833|emb|CCD81379.1| putative transcription elongation factor s-II [Schistosoma mansoni]
Length = 318
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 81/185 (43%), Gaps = 25/185 (13%)
Query: 183 VSMIKCNDYFRERIREKLYKALSK---VSGEVDEEVQDKLNGCDPIRVAITAESLMFEKW 239
V + D R + RE L AL SG + E +AI ES +++ +
Sbjct: 149 VHTLTTTDQVRLKAREMLQSALESGNIPSGAYESEF-----------LAIRIESSIYDLF 197
Query: 240 GHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQI 299
++ Y+ + R+ + NL D NP+ R VL+GHV P+ L M+SEEM S + L ++
Sbjct: 198 NNTDPKYKQRVRTRVMNLRDSNNPNLRLNVLMGHVSPDKLASMTSEEMASKEMKELREKY 257
Query: 300 KKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNC 354
KE D + GG + CG+C K T + Q SA + C NC
Sbjct: 258 TKETIEDHQMAVTGGTETDLLR-----CGKCKQTKCT-YNQVQTRSADEPMTTFVYCNNC 311
Query: 355 YQYWE 359
W+
Sbjct: 312 GHRWK 316
>gi|355562936|gb|EHH19498.1| Transcription elongation factor S-II protein 2, partial [Macaca
mulatta]
Length = 273
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 76/175 (43%), Gaps = 18/175 (10%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVK 249
D R + RE L AL V G D R++ E +F G++ Y+ +
Sbjct: 112 DAVRNKCREMLTAALQTAHDHV-------AIGADCQRLSAQIEECIFRDVGNTDMKYKNR 164
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYL 309
RS + NL D NPD RR VL G + P+ + M+SEEM SD + + + + KE + +
Sbjct: 165 VRSRISNLKDARNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIREHQM 224
Query: 310 PWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
GG + + CG+C KK + Q S+ + C C W+
Sbjct: 225 ARTGG-----TQTDLFTCGKC-RKKNCTYTQVQTRSSDEPMTTFVVCNECGNRWK 273
>gi|147901281|ref|NP_001089046.1| transcription elongation factor A (SII), 1 [Xenopus laevis]
gi|1325972|emb|CAA66255.1| TFIIS elongation factor [Xenopus laevis]
gi|1389556|dbj|BAA11672.1| transcriptional factor [Xenopus laevis]
gi|47122876|gb|AAH70555.1| LOC594866 protein [Xenopus laevis]
Length = 303
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 70/144 (48%), Gaps = 11/144 (7%)
Query: 221 GCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALI 280
G D + E +F+++ ++ Y+ + RS + NL D +NP+ RR VL G++ P+
Sbjct: 164 GADVDELGAQIEEAVFQEFKNTDAKYKNRIRSRIANLKDAKNPNLRRNVLCGNIAPDLFA 223
Query: 281 KMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGN 340
+MS+EEM SD + + + + KE + + GG + + CG+C KK +
Sbjct: 224 RMSAEEMASDELKEMRKNLTKEAIREHQMARTGG-----TETDLFTCGKC-KKKNCTYTQ 277
Query: 341 DQNSSAKR-----IKCLNCYQYWE 359
Q SA + C NC W+
Sbjct: 278 VQTRSADEPMTTFVFCNNCGNRWK 301
>gi|47215885|emb|CAG12277.1| unnamed protein product [Tetraodon nigroviridis]
Length = 311
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 222 CDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIK 281
CD + I E +F+++ ++ Y+ + RS + NL D +NP+ RR VL G + PE + K
Sbjct: 175 CDELGAQI--EDFIFQEFKNTDMKYKNRVRSRISNLKDVKNPNLRRTVLCGSITPERMAK 232
Query: 282 MSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGND 341
M++EEM SD + + + + KE D + GG + + CG+C K T +
Sbjct: 233 MTAEEMASDELKEIRKNLTKEAVRDHQMATTGG-----TQTDLFTCGKCKGKNCT-YTQV 286
Query: 342 QNSSAKR-----IKCLNCYQYWE 359
Q SA + C C W+
Sbjct: 287 QTRSADEPMTTFVFCNGCGNRWK 309
>gi|297707612|ref|XP_002830595.1| PREDICTED: transcription elongation factor A protein 2 isoform 1
[Pongo abelii]
Length = 299
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 77/175 (44%), Gaps = 18/175 (10%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVK 249
D R + RE L AL V G D R++ E +F G++ Y+ +
Sbjct: 136 DAVRNKCREMLTAALQTDHDHV-------AIGADCQRLSAQIEECIFRDVGNTDMKYKNR 188
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYL 309
RS + NL D +NPD RR VL G + P+ + M+SEEM SD + + + + KE + +
Sbjct: 189 VRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIREHQM 248
Query: 310 PWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
GG + + CG+C KK + Q S+ + C C W+
Sbjct: 249 ARTGG-----TQTDLFTCGKC-RKKNCTYTQVQTRSSDEPMTTFVVCNECGNRWK 297
>gi|403282600|ref|XP_003932732.1| PREDICTED: transcription elongation factor A protein 2 [Saimiri
boliviensis boliviensis]
Length = 306
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 79/175 (45%), Gaps = 18/175 (10%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVK 249
D R++ RE L AL V G D R++ E +F G++ Y+ +
Sbjct: 143 DAVRDKCREMLTAALQTDHDHV-------AIGADCKRLSAQIEECIFRDVGNTDMKYKNR 195
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYL 309
RS + NL D +NPD RR VL G + P+ + M+SEEM SD + + + + KE + +
Sbjct: 196 VRSRISNLKDAKNPDLRRNVLCGAITPQRIAVMTSEEMASDELKEIRKAMTKEAIREHQM 255
Query: 310 PWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
GG + + CG+C KK+ + Q S+ + C C W+
Sbjct: 256 ARTGG-----TQTDLFTCGKC-RKKSCTYTQVQTRSSDEPMTTFVVCNECGNRWK 304
>gi|348501107|ref|XP_003438112.1| PREDICTED: transcription elongation factor A protein 1-like
[Oreochromis niloticus]
Length = 311
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 222 CDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIK 281
CD + I E +F+++ ++ Y+ + RS + NL D +NP+ RR VL G V PE + K
Sbjct: 175 CDELGAQI--EECIFQEFKNTDMKYKNRVRSRISNLKDMKNPNLRRTVLCGSVTPERMAK 232
Query: 282 MSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGND 341
M++EEM SD + + + + KE D + GG + + CG+C K T +
Sbjct: 233 MTAEEMASDELKEMRKNLTKEAVRDHQMATTGG-----TQTDLFTCGKCKGKSCT-YTQV 286
Query: 342 QNSSAKR-----IKCLNCYQYWE 359
Q SA + C C W+
Sbjct: 287 QTRSADEPMTTFVFCNECGNRWK 309
>gi|384246149|gb|EIE19640.1| hypothetical protein COCSUDRAFT_25684 [Coccomyxa subellipsoidea
C-169]
Length = 127
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 66/129 (51%), Gaps = 8/129 (6%)
Query: 235 MFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRR 294
M + G Y+ KYRS++FNL D NPD RR+VL G + + L+ +S+EE+ SD +
Sbjct: 1 MHRQNGGVNARYKAKYRSLIFNLKDANNPDLRRRVLSGEITGDVLVNLSAEELASDARKS 60
Query: 295 LNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSS----AKRIK 350
N QI+K + + +G ++ + ++ CG+C +K + S+ +
Sbjct: 61 ENAQIRK---TALFEAERGQHMKKA-TTDQFQCGKCKQRKCQYYQMQTRSADEPMTTFVT 116
Query: 351 CLNCYQYWE 359
C NC W+
Sbjct: 117 CTNCGNRWK 125
>gi|432917903|ref|XP_004079557.1| PREDICTED: transcription elongation factor A protein 1-like
[Oryzias latipes]
Length = 300
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 84/179 (46%), Gaps = 18/179 (10%)
Query: 189 NDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEV 248
+D R + RE L AL +GE + G D + E +F+++ ++ Y+
Sbjct: 131 SDSIRLKCREMLANALQ--TGEDYIAI-----GADCEELGAQIEECIFQEFKNTDMKYKN 183
Query: 249 KYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRY 308
+ RS + NL D +NP+ RR VL G V PE + KM++EEM SD + + + + KE D
Sbjct: 184 RVRSRISNLKDMKNPNLRRTVLCGSVSPERMAKMTAEEMASDELKEMRKNLTKEAVRDHQ 243
Query: 309 LPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWESTT 362
+ GG + + CG+C K T + Q SA + C C W++ +
Sbjct: 244 MATTGG-----TQTDLFTCGKCKGKCCT-YTQVQTRSADEPMTTFVFCNQCGNRWKAVS 296
>gi|426392555|ref|XP_004062615.1| PREDICTED: transcription elongation factor A protein 2 [Gorilla
gorilla gorilla]
Length = 299
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 77/175 (44%), Gaps = 18/175 (10%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVK 249
D R + RE L AL V G D R++ E +F G++ Y+ +
Sbjct: 136 DAVRNKCREMLTAALQTDHDHV-------AIGADCERLSAQIEECIFRDVGNTDMKYKNR 188
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYL 309
RS + NL D +NPD RR VL G + P+ + M+SEEM SD + + + + KE + +
Sbjct: 189 VRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIREHQM 248
Query: 310 PWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
GG + + CG+C KK + Q S+ + C C W+
Sbjct: 249 ARTGG-----TQTDLFTCGKC-RKKNCTYTQVQTRSSDEPMTTFVVCNECGNRWK 297
>gi|4507385|ref|NP_003186.1| transcription elongation factor A protein 2 isoform a [Homo
sapiens]
gi|114683103|ref|XP_001153063.1| PREDICTED: transcription elongation factor A protein 2 isoform 10
[Pan troglodytes]
gi|397477238|ref|XP_003809984.1| PREDICTED: transcription elongation factor A protein 2 [Pan
paniscus]
gi|28380177|sp|Q15560.1|TCEA2_HUMAN RecName: Full=Transcription elongation factor A protein 2; AltName:
Full=Testis-specific S-II; AltName: Full=Transcription
elongation factor S-II protein 2; AltName:
Full=Transcription elongation factor TFIIS.l
gi|1217591|dbj|BAA09089.1| transcription elongation factor S-II, hS-II-T1 [Homo sapiens]
gi|17511903|gb|AAH18896.1| Transcription elongation factor A (SII), 2 [Homo sapiens]
gi|48145997|emb|CAG33221.1| TCEA2 [Homo sapiens]
gi|119595574|gb|EAW75168.1| transcription elongation factor A (SII), 2, isoform CRA_a [Homo
sapiens]
gi|167773997|gb|ABZ92433.1| transcription elongation factor A (SII), 2 [synthetic construct]
gi|307684308|dbj|BAJ20194.1| transcription elongation factor A (SII), 2 [synthetic construct]
gi|410218238|gb|JAA06338.1| transcription elongation factor A (SII), 2 [Pan troglodytes]
gi|410267706|gb|JAA21819.1| transcription elongation factor A (SII), 2 [Pan troglodytes]
gi|410287524|gb|JAA22362.1| transcription elongation factor A (SII), 2 [Pan troglodytes]
gi|410331783|gb|JAA34838.1| transcription elongation factor A (SII), 2 [Pan troglodytes]
gi|1586557|prf||2204253A transcription elongation factor S-II
Length = 299
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 77/175 (44%), Gaps = 18/175 (10%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVK 249
D R + RE L AL V G D R++ E +F G++ Y+ +
Sbjct: 136 DAVRNKCREMLTAALQTDHDHV-------AIGADCERLSAQIEECIFRDVGNTDMKYKNR 188
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYL 309
RS + NL D +NPD RR VL G + P+ + M+SEEM SD + + + + KE + +
Sbjct: 189 VRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIREHQM 248
Query: 310 PWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
GG + + CG+C KK + Q S+ + C C W+
Sbjct: 249 ARTGG-----TQTDLFTCGKC-RKKNCTYTQVQTRSSDEPMTTFVVCNECGNRWK 297
>gi|410924055|ref|XP_003975497.1| PREDICTED: transcription elongation factor A protein 1-like
[Takifugu rubripes]
Length = 311
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 69/143 (48%), Gaps = 13/143 (9%)
Query: 222 CDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIK 281
CD + I E +F+ + ++ Y+ + RS + NL D +NP+ RR VL G + PE + K
Sbjct: 175 CDELGAQI--EDFIFQVFKNTDMKYKNRVRSRISNLKDVKNPNLRRTVLCGSITPERMAK 232
Query: 282 MSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGND 341
M++EEM SD + + + + KE D + GG + + CG+C K T +
Sbjct: 233 MTAEEMASDELKEIRKNLTKEAVRDHQMATTGG-----TQTDLFTCGKCKGKNCT-YTQV 286
Query: 342 QNSSAKR-----IKCLNCYQYWE 359
Q SA + C C W+
Sbjct: 287 QTRSADEPMTTFVFCSGCGNRWK 309
>gi|395829391|ref|XP_003787843.1| PREDICTED: transcription elongation factor A protein 2 [Otolemur
garnettii]
Length = 356
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 109/252 (43%), Gaps = 16/252 (6%)
Query: 114 RQITSDEFEQALDVEVVKV--RRVDQKGAPRSKKLVGSEFIVTEETNSLDNVDAEAIREE 171
R+ +SDE AL ++K + +D A ++ G + ++ + VD R E
Sbjct: 113 RKQSSDEEVIALAKSLIKSWKKLLDASDAKTRERGRGMPLPTSSSKDASEAVDPSRKRSE 172
Query: 172 KPASAVVPQKLVSM----IKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRV 227
P P ++ + + C D R + RE L AL V G D R+
Sbjct: 173 MPRMPSTP-RITTFPPVPVTC-DAVRNKCREMLSAALQTDHDHV-------AIGADLERL 223
Query: 228 AITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEM 287
+ E +F G++ Y+ + RS + NL D +NPD RR VL G + P+ + M+SEEM
Sbjct: 224 SAQIEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEM 283
Query: 288 VSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAK 347
SD + + + + KE + + GG ++ ++ C + + +D+ +
Sbjct: 284 ASDELKEIRKAMTKEAIREHQMARTGGTQTDLFTCSKCRKKNCTYTQVQTRSSDEPMTTF 343
Query: 348 RIKCLNCYQYWE 359
+ C C W+
Sbjct: 344 -VVCNECGNRWK 354
>gi|38505156|ref|NP_942016.1| transcription elongation factor A protein 2 isoform b [Homo
sapiens]
Length = 272
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 77/175 (44%), Gaps = 18/175 (10%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVK 249
D R + RE L AL V G D R++ E +F G++ Y+ +
Sbjct: 109 DAVRNKCREMLTAALQTDHDHV-------AIGADCERLSAQIEECIFRDVGNTDMKYKNR 161
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYL 309
RS + NL D +NPD RR VL G + P+ + M+SEEM SD + + + + KE + +
Sbjct: 162 VRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIREHQM 221
Query: 310 PWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
GG + + CG+C KK + Q S+ + C C W+
Sbjct: 222 ARTGG-----TQTDLFTCGKC-RKKNCTYTQVQTRSSDEPMTTFVVCNECGNRWK 270
>gi|348554119|ref|XP_003462873.1| PREDICTED: transcription elongation factor A protein 2-like [Cavia
porcellus]
Length = 325
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 80/180 (44%), Gaps = 19/180 (10%)
Query: 186 IKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGT 245
I CN R + RE L AL V G D R++ E +F G++
Sbjct: 134 ITCN-AVRNKCREMLTTALQTDHDHV-------AVGADCERLSAQIEECIFRDVGNTDMK 185
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
Y+ + RS + NL D +NP+ RR VL G + P+ + M+SEEM SD + + + + KE
Sbjct: 186 YKNRVRSRISNLKDAKNPELRRNVLCGTITPQQIAVMTSEEMASDELKEIRKAMTKEAIR 245
Query: 306 DRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWES 360
+ + GG + + CG+C KK + Q S+ + C C W++
Sbjct: 246 EHQMARTGG-----TQTDLFTCGKC-RKKNCTYTQVQTRSSDEPMTTFVVCNECGNRWKA 299
>gi|119595576|gb|EAW75170.1| transcription elongation factor A (SII), 2, isoform CRA_c [Homo
sapiens]
Length = 324
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 77/175 (44%), Gaps = 18/175 (10%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVK 249
D R + RE L AL V G D R++ E +F G++ Y+ +
Sbjct: 136 DAVRNKCREMLTAALQTDHDHV-------AIGADCERLSAQIEECIFRDVGNTDMKYKNR 188
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYL 309
RS + NL D +NPD RR VL G + P+ + M+SEEM SD + + + + KE + +
Sbjct: 189 VRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIREHQM 248
Query: 310 PWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
GG + + CG+C KK + Q S+ + C C W+
Sbjct: 249 ARTGG-----TQTDLFTCGKC-RKKNCTYTQVQTRSSDEPMTTFVVCNECGNRWK 297
>gi|307192626|gb|EFN75800.1| Transcription elongation factor S-II [Harpegnathos saltator]
Length = 278
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 22/212 (10%)
Query: 155 EETNSLDNVDAEAIREEKPASAVVPQKL-VSMIKCNDYFRERIREKLYKALSKVSGEVDE 213
+E + +D DA+ ++E+KP+ V ++L D R + RE L AL +V G+V
Sbjct: 80 KEKDMMDGSDAK-MKEDKPSKDVQRKQLSFPAPTTTDAVRLKCRELLAAAL-RVDGKV-- 135
Query: 214 EVQDKLNGC-DPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLG 272
++GC P +A E ++ ++ ++ Y+ + RS + NL D +NP+ R ++G
Sbjct: 136 -----IDGCASPEELAEELEEAIYAEFKNTDNRYKNRVRSRVANLRDVKNPNLRTNFIVG 190
Query: 273 HVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGH 332
+ P L M++EEM SD ++L +Q KKE +D L G + CG+C
Sbjct: 191 AITPARLAVMTAEEMASDEIKQLREQFKKEAINDAQLATVQGTKTDLLK-----CGKC-K 244
Query: 333 KKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
K+ + Q SA + C C W+
Sbjct: 245 KRNCTYNQVQTRSADEPMTTFVLCNECGNRWK 276
>gi|327279244|ref|XP_003224367.1| PREDICTED: transcription elongation factor A protein 1-like [Anolis
carolinensis]
Length = 341
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 72/149 (48%), Gaps = 11/149 (7%)
Query: 221 GCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALI 280
G D + E +F++ ++ Y+ + RS + NL D +NP+ R+ VL G++ P+
Sbjct: 165 GADEEELGSQIEEAIFQELKNTDMKYKNRVRSRIANLKDTKNPNLRKNVLCGNIAPDRFA 224
Query: 281 KMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGN 340
KM++EEM SD + + + + KE + + GG ++ CG+C KK +
Sbjct: 225 KMTAEEMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFS-----CGKC-KKKNCTYTQ 278
Query: 341 DQNSSAKR-----IKCLNCYQYWESTTAL 364
Q SA + C C W+S T++
Sbjct: 279 VQTRSADEPMTTFVVCNECGNRWKSVTSM 307
>gi|405958419|gb|EKC24549.1| Transcription elongation factor A protein 1 [Crassostrea gigas]
Length = 369
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 76/149 (51%), Gaps = 11/149 (7%)
Query: 189 NDYFRERIREKLYKALSKVSGEVDEEVQDKL-NGCDPIRVAITAESLMFEKWGHSFGTYE 247
ND R + RE L +L +DEEV+ ++ N P +A E + ++ ++ Y+
Sbjct: 130 NDPVRIKCRELLASSLV-----LDEEVKVRIPNAQCPKELAAKIEDSIHLEFKNTDQKYK 184
Query: 248 VKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDR 307
+ RS + NL D +NP + V++G + PE + MS+EEM SD R+L + KE D
Sbjct: 185 ARIRSRVANLKDKKNPKLKEGVIMGLIPPERIANMSAEEMASDEMRQLRAKFTKESIDDH 244
Query: 308 YLPWKGGYLGPIYHSTRYMCGRCGHKKTT 336
+ + G + ++ CG+CG K T
Sbjct: 245 QMSRQEGTVTDLFK-----CGKCGKKNCT 268
>gi|225716628|gb|ACO14160.1| Transcription elongation factor A protein 1 [Esox lucius]
Length = 181
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 85/176 (48%), Gaps = 18/176 (10%)
Query: 189 NDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEV 248
+D R + RE L +AL + ++ CD + I E +F ++ ++ Y+
Sbjct: 17 SDSVRMKCREMLSQAL-----QAGDDYIAIGADCDELGAQI--EESIFSEFQNTDPKYKN 69
Query: 249 KYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRY 308
+ RS + NL D +NP+ RR VL G+V P+ + KM++EEM SD + + + + KE D
Sbjct: 70 RVRSRIANLKDIKNPNLRRNVLCGNVAPDRMAKMTAEEMASDELKLIRKNLTKEAIRDHQ 129
Query: 309 LPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
+ GG + + CG+C K+ T + Q SA + C+ C W+
Sbjct: 130 VSQTGG-----TQTDLFTCGKCKKKRCT-YTQVQTRSADEPMTTFVFCMECGNRWK 179
>gi|45360521|ref|NP_988887.1| transcription elongation factor A (SII), 1 [Xenopus (Silurana)
tropicalis]
gi|37589996|gb|AAH59769.1| hypothetical protein MGC76031 [Xenopus (Silurana) tropicalis]
gi|89267843|emb|CAJ82979.1| transcription elongation factor A (SII), 1 [Xenopus (Silurana)
tropicalis]
Length = 304
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 93/211 (44%), Gaps = 21/211 (9%)
Query: 155 EETNSLDNVDAEAIREEKPA-SAVVPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDE 213
EE++S N+ A +EE PA S +D R + RE L AL +
Sbjct: 107 EESSSSTNISAR--KEECPAPSDGFITSFPRAPSTSDSVRIKCRELLATALKTGDDHI-- 162
Query: 214 EVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGH 273
G D + E +F+++ ++ Y+ + RS + NL D +NP+ RR VL G+
Sbjct: 163 -----AIGADVDELGAQIEEAVFQEFKNTEAKYKNRIRSRIANLKDAKNPNLRRNVLCGN 217
Query: 274 VKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHK 333
+ P+ +MS+EEM SD + + + + KE + + GG + + CG+C K
Sbjct: 218 IAPDLFARMSAEEMASDELKEMRKNLTKEAIREHQMARTGG-----TETDLFTCGKC-KK 271
Query: 334 KTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
K + Q SA + C C W+
Sbjct: 272 KNCTYTQVQTRSADEPMTTFVFCNECGNRWK 302
>gi|427797651|gb|JAA64277.1| Putative transcription elongation factor a sii 1, partial
[Rhipicephalus pulchellus]
Length = 292
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 71/141 (50%), Gaps = 14/141 (9%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVK 249
+ R + RE L AL + +D GC+ +A E ++ ++G + Y+ +
Sbjct: 131 NAVRLKCRELLSSAL---------KCEDMPEGCNTDSLAAKIEESIYNEFGDTNNKYKNR 181
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYL 309
RS + NL D +NP R VL G ++PE + +M++EEM SD ++L Q++ KE +D +
Sbjct: 182 VRSRVSNLKDSKNPALRINVLHGAIEPERIARMTAEEMASDDMKQLRQRLTKEAINDHQM 241
Query: 310 PWKGGYLGPIYHSTRYMCGRC 330
GG + CG+C
Sbjct: 242 ATTGGTKTDLLK-----CGKC 257
>gi|126302941|ref|XP_001375502.1| PREDICTED: transcription elongation factor A protein 2-like
[Monodelphis domestica]
Length = 359
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 95/224 (42%), Gaps = 21/224 (9%)
Query: 148 GSEFIVTEETNSLDNVDAEAIREEKPASAVVPQKLVSM----IKCNDYFRERIREKLYKA 203
S + ++ D D + +++ P + K+ + I C D R + RE L A
Sbjct: 93 NSSLATSSSKDASDTKDQSSNKKQDPPRTISTPKITTFPPIPITC-DAVRNKCREMLTAA 151
Query: 204 LSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENP 263
L + V G D ++ E +++ ++ Y+ + RS + NL D +NP
Sbjct: 152 LQTDNDHV-------AIGADCEHLSAQIEEYIYQDVKNTDMKYKNRVRSRISNLKDSKNP 204
Query: 264 DFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHST 323
D R+ VL G + PE + M+SEEM S+ + + + + KE + + GG +
Sbjct: 205 DLRKNVLCGAITPEQIAVMTSEEMASNELKEIRKAMTKEAIREHQMAKTGG-----TQTD 259
Query: 324 RYMCGRCGHKKTTNHGNDQNSS----AKRIKCLNCYQYWESTTA 363
+ CG+C K T SS + C C W++ TA
Sbjct: 260 LFTCGKCKKKNCTYTQVQTRSSDEPMTTFVVCNECGNRWKNRTA 303
>gi|345566736|gb|EGX49678.1| hypothetical protein AOL_s00078g167 [Arthrobotrys oligospora ATCC
24927]
Length = 316
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 12/143 (8%)
Query: 223 DPIRVAITAESLMFEKWGHSFGT-YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIK 281
D ++A E ++ G T Y K RS+ FNL DP+NP R V+ G ++P L
Sbjct: 178 DVFKLAKDTEHNLYRNHGSKTDTAYRNKLRSLFFNLKDPKNPSLRNNVISGRIEPMRLAL 237
Query: 282 MSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGND 341
MSSEEM S +R +++I++E + + P + + CG+CG K+ ++
Sbjct: 238 MSSEEMASAERKREDEKIEQENMKEAMV-----AKAPTSVTDQLRCGKCG-KRNVSYSQA 291
Query: 342 QNSSAKR-----IKCLNCYQYWE 359
Q SA +CL C W+
Sbjct: 292 QTRSADEPMTTFCECLQCGNRWK 314
>gi|444729710|gb|ELW70117.1| Transcription elongation factor A protein 2 [Tupaia chinensis]
Length = 298
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 85/204 (41%), Gaps = 20/204 (9%)
Query: 163 VDAEAIREEKPASAVVPQK---LVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKL 219
D + E+P P+ L + C D R + E L AL K ++
Sbjct: 106 TDPSPKKSEQPRMPTTPRITAFLPGSVTC-DAIRSKCCEMLTAALQK-------DLDYVA 157
Query: 220 NGCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEAL 279
G D ++ E +F G++ G Y+ + RS +FNL D +NPD RRKVL G + P+ +
Sbjct: 158 LGADCESLSAQIEESIFRDIGNTDGKYKNRVRSRIFNLRDAKNPDLRRKVLRGVITPQQI 217
Query: 280 IKMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHG 339
M++EEM SD + + + + +E GG + CG+C K T
Sbjct: 218 AVMTAEEMASDEMKEIRKAMTREAIRKHQKARTGG-----TQTDLITCGKCSGKSCTYTQ 272
Query: 340 NDQNSS----AKRIKCLNCYQYWE 359
SS + C C W+
Sbjct: 273 AQTRSSDEPMTTFVLCNECGNRWK 296
>gi|346466499|gb|AEO33094.1| hypothetical protein [Amblyomma maculatum]
Length = 313
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 75/166 (45%), Gaps = 15/166 (9%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVK 249
+ R + RE L AL + +D +GC+ +A E ++ ++G + Y+ +
Sbjct: 152 NAVRLKCRELLSSAL---------KCEDMPDGCNVDGLAAKIEESIYNEFGDTNMKYKNR 202
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYL 309
RS + NL D NP R VL G + PE + +MS+EEM SD + L Q+ KE +D +
Sbjct: 203 VRSRVSNLKDSRNPALRLNVLHGAIDPERIARMSAEEMASDEMKELRQRFTKESINDHQM 262
Query: 310 PWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKRIKCLNCY 355
GG + CG+C K + Q SA CY
Sbjct: 263 AVTGGTKTDLLK-----CGKC-RKNNCTYNQVQTRSADEPMTTFCY 302
>gi|410953358|ref|XP_003983338.1| PREDICTED: transcription elongation factor A protein 2 [Felis
catus]
Length = 308
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 108/256 (42%), Gaps = 24/256 (9%)
Query: 114 RQITSDEFEQALDVEVVKV--RRVDQKGAPRSKKLVGSEFIVTEETNSLDNVDAEAIREE 171
R+ +SDE AL ++K + +D A ++ G + S + D R E
Sbjct: 65 RKQSSDEGVIALAKSLIKSWKKLLDASDAKAREQRRGGPLPASSSKESPEAQDPSRKRPE 124
Query: 172 KPASAVVPQKLVSM----IKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRV 227
P P ++ + + C D R + RE L AL + D + C+ +
Sbjct: 125 LPRMPSAP-RITTFPPVPVTC-DAVRNKCRELLTAAL-----QTDHDHMAVGADCEGLSA 177
Query: 228 AITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEM 287
I E +F G++ Y+ + RS + NL D +NPD RR VL G + P+ + M+SEEM
Sbjct: 178 QI--EECIFRDVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEM 235
Query: 288 VSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAK 347
SD + + + + KE + + GG + + CG+C K T SS +
Sbjct: 236 ASDELKEIRKAMTKEAIREHQMARTGG-----TQTDLFTCGKCKKKNCTYTQVQTRSSDE 290
Query: 348 RIK----CLNCYQYWE 359
+ C C W+
Sbjct: 291 PMTTFVVCNECGNRWK 306
>gi|297827973|ref|XP_002881869.1| hypothetical protein ARALYDRAFT_483368 [Arabidopsis lyrata subsp.
lyrata]
gi|297327708|gb|EFH58128.1| hypothetical protein ARALYDRAFT_483368 [Arabidopsis lyrata subsp.
lyrata]
Length = 225
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 66/123 (53%), Gaps = 26/123 (21%)
Query: 187 KCNDYFRERIREKLYKALSKVSGEV-DEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGT 245
K D R+++RE L +L+KV+ EV D E++ ++ CDP VAI+ ES MFE
Sbjct: 111 KTGDSKRDKVREILQTSLAKVATEVVDTEMKTRVTACDPWVVAISVESAMFE-------- 162
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
NPD RRKVL+G + E L+ M +EM GS ++ +++++ + +
Sbjct: 163 --------------SNNPDLRRKVLIGEINGERLVTMERQEM---GSEKIQKEVQRIKEN 205
Query: 306 DRY 308
R+
Sbjct: 206 ARF 208
>gi|392584823|gb|EIW74165.1| transcription elongation factor [Coniophora puteana RWD-64-598 SS2]
Length = 294
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 80/188 (42%), Gaps = 32/188 (17%)
Query: 183 VSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHS 242
V + D R++ E +Y L+ SG +++ K A E+ +F ++G +
Sbjct: 126 VKIKSTGDNTRDKCSELMYDGLASDSGAPSDQIASK---------AAAVETAVFNQFGST 176
Query: 243 FGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKE 302
Y+ K RS+ NL D NP R ++ G + P MSS EM S+ R ++++++E
Sbjct: 177 SAEYKSKIRSLFVNLKDKNNPSLRETIVSGDLSPSKFATMSSSEMASEERRAADKRLQEE 236
Query: 303 R------ASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKC 351
A+++ G + CGRC +K + Q SA + C
Sbjct: 237 NFFKSLAAAEQEAETDG-----------FQCGRCKQRK-CRYRQAQTRSADEPMTTFVTC 284
Query: 352 LNCYQYWE 359
NC W+
Sbjct: 285 TNCGNRWK 292
>gi|226442714|ref|NP_001139934.1| transcription elongation factor A protein 1 [Salmo salar]
gi|221220186|gb|ACM08754.1| Transcription elongation factor A protein 1 [Salmo salar]
Length = 311
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 84/176 (47%), Gaps = 18/176 (10%)
Query: 189 NDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEV 248
+D R + RE L +AL + G D ++A E +F ++ ++ Y+
Sbjct: 147 SDSVRIKCREMLSQALQAGDDYI-------AIGADCDQLAAQIEEYIFCEFKNTDPKYKN 199
Query: 249 KYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRY 308
+ RS + NL D +NP+ R+ VL G+V P+ + KM+++EM SD + + + + KE D
Sbjct: 200 RVRSRIANLKDIKNPNLRKSVLCGNVSPDRMAKMTAQEMASDELKLIRKNLTKEAIRDHQ 259
Query: 309 LPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
+ GG + + CG+C K+ T + Q SA + C +C W+
Sbjct: 260 VSQTGG-----TQTDLFTCGKCKKKRCT-YTQVQTRSADEPMTTFVFCNDCGNRWK 309
>gi|358254214|dbj|GAA54231.1| transcription elongation factor S-II, partial [Clonorchis sinensis]
Length = 143
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 57/110 (51%), Gaps = 5/110 (4%)
Query: 227 VAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEE 286
+AI ES +++ + ++ Y+ + R+ + NL D NP+ R VL+GHV P+ L M+SEE
Sbjct: 11 LAIRIESAIYDIFNNTDSKYKQRVRTRVMNLRDSNNPNLRLNVLMGHVNPDKLASMTSEE 70
Query: 287 MVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTT 336
M S + L ++ KE D + GG + CG+C K T
Sbjct: 71 MASKEMKELREKYTKETIEDHQMAVTGGTETDLLK-----CGKCKQNKCT 115
>gi|301780656|ref|XP_002925744.1| PREDICTED: transcription elongation factor A protein 2-like
[Ailuropoda melanoleuca]
Length = 300
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 76/174 (43%), Gaps = 16/174 (9%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVK 249
D R + RE L AL + D + C+ + I E +F G++ Y +
Sbjct: 137 DAVRNKCREMLTAAL-----QTDRDHMAVGADCEGLSAQI--EECIFRDVGNTDMKYRNR 189
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYL 309
RS + NL D +NPD RR VL G + P+ + M+SEEM SD + + + + KE + +
Sbjct: 190 VRSRISNLKDAKNPDLRRNVLCGVITPQQIAVMTSEEMASDELKEIRKAMTKEAIREHQM 249
Query: 310 PWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKRIK----CLNCYQYWE 359
GG + + CG+C K T SS + + C C W+
Sbjct: 250 ARTGG-----TQTDLFTCGKCRRKNCTYTQVQTRSSDEPMTTFVVCNECGNRWK 298
>gi|41055847|ref|NP_957280.1| transcription elongation factor A protein 2 [Danio rerio]
gi|28277993|gb|AAH46074.1| Transcription elongation factor A (SII), 2 [Danio rerio]
Length = 300
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 81/175 (46%), Gaps = 18/175 (10%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVK 249
D R + RE L AL + D + Q G D +A E +++++ + Y+ +
Sbjct: 137 DSVRTKCRELLVAAL-----QTDGDHQ--TIGADCEHMAAQIEDYIYQEFKSTDMKYKTR 189
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYL 309
RS + NL D +NPD RR VL G++ PE + M++EEM S + + + + KE + L
Sbjct: 190 LRSRISNLKDQKNPDLRRNVLCGNISPERIASMTAEEMASPELKEIRKALTKESIREHQL 249
Query: 310 PWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
GG + ++CG+C K T + Q SA + C C W+
Sbjct: 250 SKVGG-----TETDMFVCGKCKGKNCT-YTQVQTRSADEPMTTFVLCNECGNRWK 298
>gi|115496660|ref|NP_001068797.1| transcription elongation factor A protein 2 [Bos taurus]
gi|122144556|sp|Q148K0.1|TCEA2_BOVIN RecName: Full=Transcription elongation factor A protein 2; AltName:
Full=Transcription elongation factor S-II protein 2
gi|109939943|gb|AAI18233.1| Transcription elongation factor A (SII), 2 [Bos taurus]
Length = 300
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 76/175 (43%), Gaps = 18/175 (10%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVK 249
D R + RE L AL V G D +A E +F G++ Y+ +
Sbjct: 137 DAVRTKCREMLTAALQTDHDHV-------AIGADCECLAGQIEECIFRDVGNTDMKYKNR 189
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYL 309
RS L NL D +NP RRKVL G + P+ + M+SEEM SD + + + + KE + +
Sbjct: 190 VRSRLSNLKDAKNPGLRRKVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIREHQM 249
Query: 310 PWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
GG + + CG+C KK + Q S+ + C C W+
Sbjct: 250 ARTGG-----TQTDLFTCGKC-RKKNCTYTQVQTRSSDEPMTTFVVCNECGNRWK 298
>gi|395506561|ref|XP_003757600.1| PREDICTED: transcription elongation factor A protein 2 [Sarcophilus
harrisii]
Length = 300
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 85/189 (44%), Gaps = 17/189 (8%)
Query: 152 IVTEETNSLDNVDAEAIREEKPASAVVPQKLVSM----IKCNDYFRERIREKLYKALSKV 207
+ T ++ D D + +++ P + K+ + I C D R + RE L AL
Sbjct: 96 LATSSKDASDTKDQSSNKKQDPPRTLTTPKITTFPPIPITC-DAVRNKCREMLTAALQTD 154
Query: 208 SGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRR 267
+ + G D ++ E +++ ++ Y+ + RS + NL D +NPD R+
Sbjct: 155 NDHI-------AIGADCEHLSAQIEEYIYQDVKNTDMKYKNRVRSRISNLKDSKNPDLRK 207
Query: 268 KVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMC 327
VL G + PE + M+SEEM S+ + + + + KE + + GG + + C
Sbjct: 208 NVLCGAITPEQIAVMTSEEMASNELKEIRKAMTKEAIREHQMAKTGG-----TQTDLFTC 262
Query: 328 GRCGHKKTT 336
G+C K T
Sbjct: 263 GKCKKKNCT 271
>gi|449488934|ref|XP_002191406.2| PREDICTED: transcription elongation factor A protein 3 [Taeniopygia
guttata]
Length = 379
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 83/175 (47%), Gaps = 18/175 (10%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVK 249
D R++ E L AL +D++ ++ C+ ++A E +F++ + Y +
Sbjct: 216 DSVRDKCIEMLTAAL-----RMDDDYKEFGVNCE--KMASEIEDHIFQELKSTDMKYRNR 268
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYL 309
RS + NL DP+NP RR VL G ++P + +M++EEM SD ++L + +E + +
Sbjct: 269 VRSRISNLKDPKNPALRRNVLCGAIEPSLIARMTAEEMASDELKKLRNAMTQEAIREHQM 328
Query: 310 PWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
GG + ++ CG+C KK + Q SA + C C W+
Sbjct: 329 AKTGGTVTDLFQ-----CGKC-KKKNCTYNQVQTRSADEPMTTFVLCNECGNRWK 377
>gi|242795417|ref|XP_002482584.1| transcription elongation factor S-II [Talaromyces stipitatus ATCC
10500]
gi|218719172|gb|EED18592.1| transcription elongation factor S-II [Talaromyces stipitatus ATCC
10500]
Length = 296
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 62/128 (48%), Gaps = 16/128 (12%)
Query: 242 SFGT-----YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLN 296
SFG Y+ K RS+ NL + NP R++VL V PE +KM+ EE+ SD R L+
Sbjct: 174 SFGPETKEQYKTKIRSLFQNLKNKSNPQLRQRVLSNEVTPEKFVKMTHEELKSDERRALD 233
Query: 297 QQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKC 351
++I KE + + S+ CG+CG +K T + Q SA C
Sbjct: 234 EKIHKENMDKAMVAQAERSI-----SSSLQCGKCGQRKVT-YTEAQTRSADEPMTLFCTC 287
Query: 352 LNCYQYWE 359
LNC + W+
Sbjct: 288 LNCGKSWK 295
>gi|355723561|gb|AES07931.1| transcription elongation factor A , 2 [Mustela putorius furo]
Length = 249
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 68/147 (46%), Gaps = 12/147 (8%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVK 249
D R + RE L AL D + C+ + I E +F G++ Y+ +
Sbjct: 111 DAVRNKCREMLAAAL-----RTDHDHMAVGADCEGLSAQI--EECIFRDVGNTDMKYKNR 163
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYL 309
RS + NL D +NPD RR VL G + P+ + M+SEEM SD + + + + KE + +
Sbjct: 164 VRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIREHQM 223
Query: 310 PWKGGYLGPIYHSTRYMCGRCGHKKTT 336
GG + + CG+C K T
Sbjct: 224 ARTGG-----TQTDLFTCGKCRRKNCT 245
>gi|307180955|gb|EFN68743.1| Transcription elongation factor A protein 1 [Camponotus floridanus]
Length = 311
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 22/212 (10%)
Query: 155 EETNSLDNVDAEAIREEKPASAVV-PQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDE 213
+E ++ D D + ++EEKP + Q D R + RE L AL +V G+V
Sbjct: 113 KEKDTTDAADVK-VKEEKPNKDIQRKQATFPAPTTTDAVRLKCRELLIAAL-RVDGKV-- 168
Query: 214 EVQDKLNGC-DPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLG 272
++ C P +A E ++ ++ ++ Y+ + RS + NL D +NP+ R L+G
Sbjct: 169 -----IDSCASPEELAEELEEAIYGEFKNTDNRYKNRVRSRIANLRDAKNPNLRMNFLVG 223
Query: 273 HVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGH 332
+ P L M++EEM SD ++L +Q KKE +D L G + CG+C
Sbjct: 224 AITPARLAVMTAEEMASDEIKQLREQFKKEAINDAQLATVQGTKTDLLK-----CGKC-K 277
Query: 333 KKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
K+ + Q SA + C C W+
Sbjct: 278 KRNCTYNQVQTRSADEPMTTFVLCNECGNRWK 309
>gi|441639245|ref|XP_003280185.2| PREDICTED: transcription elongation factor A protein 2 [Nomascus
leucogenys]
Length = 443
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 90/215 (41%), Gaps = 20/215 (9%)
Query: 152 IVTEETNSLDNVDAEAIREEKPASAVVPQ--KLVSMIKCNDYFRERIREKLYKALSKVSG 209
+ T ++ + D R E P + P+ + D R + RE L AL
Sbjct: 240 LPTSSRDASEAPDPSRKRPELPRAPSTPRITTFPPVPVTCDAVRSKCREMLAAALQTDRD 299
Query: 210 EVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKV 269
V G D R++ E +F G++ Y+ + RS + NL D +NPD RR V
Sbjct: 300 HV-------AIGADCERLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPDLRRNV 352
Query: 270 LLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGR 329
L G + P+ + M+SEEM SD + + + + KE + + GG + + CG+
Sbjct: 353 LCGAITPQQIAVMTSEEMASDELKEIRKTMTKEAIREHQMARTGG-----TQTDLFTCGK 407
Query: 330 CGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
C KK + Q S+ + C C W+
Sbjct: 408 C-RKKNCTYTQVQTRSSDEPMTTFVVCNECGNRWK 441
>gi|226372852|gb|ACO52051.1| Transcription elongation factor A protein 1 [Rana catesbeiana]
Length = 306
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 11/144 (7%)
Query: 221 GCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALI 280
G D + E +F+++ ++ Y+ + RS + NL D +NP+ RR VL G++ P
Sbjct: 167 GADDEELGAQIEEAVFQEFKNTDAKYKNRVRSRIANLKDGKNPNLRRNVLCGNISPIVFA 226
Query: 281 KMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGN 340
KMS+EEM SD + + + + KE + + GG + + CG+C K T +
Sbjct: 227 KMSAEEMASDELKEMRKNLTKEAIREHQMAKTGG-----TETDLFSCGKCKMKNCT-YTQ 280
Query: 341 DQNSSAKR-----IKCLNCYQYWE 359
Q SA + C C W+
Sbjct: 281 VQTRSADEPMTTFVFCNTCGNRWK 304
>gi|164661661|ref|XP_001731953.1| hypothetical protein MGL_1221 [Malassezia globosa CBS 7966]
gi|159105854|gb|EDP44739.1| hypothetical protein MGL_1221 [Malassezia globosa CBS 7966]
Length = 304
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 73/176 (41%), Gaps = 20/176 (11%)
Query: 189 NDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSF--GTY 246
ND R + LY +L EVQD A+ E + K G S Y
Sbjct: 140 NDRVRNACLKLLYNSL---------EVQDHAEPQTVFASAMKIEEAAYTKIGASTTNNDY 190
Query: 247 EVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASD 306
K RS+ NL D NP+ R+KVL GH+ P L+ M SEE+ S + + I+++
Sbjct: 191 RGKVRSLSLNLKDKNNPELRQKVLEGHIDPGMLVVMRSEELASKSLKEQQESIRQQN--- 247
Query: 307 RYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSS----AKRIKCLNCYQYW 358
L G + + CG+C +KT + S+ + C+NC W
Sbjct: 248 --LHNAKGAEAQEAETDAFQCGKCKQRKTRYYQMQTRSADEPMTTFVTCVNCNHKW 301
>gi|440894606|gb|ELR47016.1| Transcription elongation factor A protein 2, partial [Bos grunniens
mutus]
Length = 284
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 11/133 (8%)
Query: 232 ESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDG 291
E ++F G++ Y+ + RS L NL D +NP RRKVL G + P+ + M+SEEM SD
Sbjct: 158 EYILFRDVGNTDMKYKNRVRSRLSNLKDAKNPGLRRKVLCGAITPQQIAVMTSEEMASDE 217
Query: 292 SRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR--- 348
+ + + + KE + + GG + + CG+C KK + Q S+
Sbjct: 218 LKEIRKAMTKEAIREHQMARTGG-----TQTDLFTCGKC-RKKNCTYTQVQTRSSDEPMT 271
Query: 349 --IKCLNCYQYWE 359
+ C C W+
Sbjct: 272 TFVVCNECGNRWK 284
>gi|296481069|tpg|DAA23184.1| TPA: transcription elongation factor A protein 2 [Bos taurus]
Length = 286
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 67/147 (45%), Gaps = 12/147 (8%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVK 249
D R + RE L AL V G D +A E +F G++ Y+ +
Sbjct: 137 DAVRTKCREMLTAALQTDHDHV-------AIGADCECLAGQIEECIFRDVGNTDMKYKNR 189
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYL 309
RS L NL D +NP RRKVL G + P+ + M+SEEM SD + + + + KE + +
Sbjct: 190 VRSRLSNLKDAKNPGLRRKVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIREHQM 249
Query: 310 PWKGGYLGPIYHSTRYMCGRCGHKKTT 336
GG + + CG+C K T
Sbjct: 250 ARTGG-----TQTDLFTCGKCRKKNCT 271
>gi|195115581|ref|XP_002002335.1| GI17330 [Drosophila mojavensis]
gi|193912910|gb|EDW11777.1| GI17330 [Drosophila mojavensis]
Length = 323
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 87/196 (44%), Gaps = 24/196 (12%)
Query: 170 EEKPASAVVPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGC-DPIRVA 228
E+KP+SA M D R + RE L AL GEV E GC +P +A
Sbjct: 144 EKKPSSAQTSFPAGGMT---DAVRLKCREMLTNALK--IGEVPE-------GCAEPEEMA 191
Query: 229 ITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMV 288
E ++ ++ ++ Y+ + RS + NL DP+NP R + G V + L KM+ EEM
Sbjct: 192 AELEDAIYSEFKNTDMKYKNRIRSRVANLKDPKNPGLRGNFMCGAVSAKQLAKMTPEEMA 251
Query: 289 SDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR 348
SD ++L ++ KE +D L G + CG+C K+ + Q SA
Sbjct: 252 SDEMKKLREKFVKEAINDAQLATVQGTKTDLLK-----CGKC-KKRNCTYNQLQTRSADE 305
Query: 349 -----IKCLNCYQYWE 359
+ C C W+
Sbjct: 306 PMTTFVMCNECGNRWK 321
>gi|359322715|ref|XP_537866.4| PREDICTED: uncharacterized protein LOC480747 [Canis lupus
familiaris]
Length = 592
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 77/174 (44%), Gaps = 16/174 (9%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVK 249
D R + RE L AL + D + C+ + I E +F G++ Y+ +
Sbjct: 429 DAVRNKCREMLTAAL-----QTDHDHMAVGADCEGLSAQI--EECIFRDVGNTDMKYKNR 481
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYL 309
RS + NL D +NPD RR VL G + P+ + M+SEEM SD + + + + KE + +
Sbjct: 482 VRSRISNLKDAKNPDLRRNVLCGVITPQQIAVMTSEEMASDELKEIRKAMTKEAIREHQM 541
Query: 310 PWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKRIK----CLNCYQYWE 359
GG + + CGRC K T SS + + C C W+
Sbjct: 542 ARTGG-----TQTDLFTCGRCRRKNCTYTQVQTRSSDEPMTTFVVCNECGNRWK 590
>gi|432867255|ref|XP_004071102.1| PREDICTED: transcription elongation factor A protein 2-like
[Oryzias latipes]
Length = 309
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 82/176 (46%), Gaps = 18/176 (10%)
Query: 189 NDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEV 248
+D R + RE L AL + D++ K G D +A E +F+++ + Y+
Sbjct: 145 SDSVRNKCRELLVAAL-----QTDDDY--KTIGVDCDHLAAQIEHQIFQEFKSTDMKYKA 197
Query: 249 KYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRY 308
+ RS + NL D +NPD RR VL G++ + + M++EEM S +++ + + KE +
Sbjct: 198 RLRSRISNLKDQKNPDLRRNVLCGNISAQRIACMTAEEMASAELKQIREALTKESIREHQ 257
Query: 309 LPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
L GG + ++C +C H K + Q SA + C C W+
Sbjct: 258 LSKVGG-----TETDMFICSKC-HGKNCTYTQVQTRSADEPMTTFVLCNGCGNRWK 307
>gi|62543505|ref|NP_001015008.1| transcription elongation factor A protein 3 [Rattus norvegicus]
gi|60552718|gb|AAH91180.1| Transcription elongation factor A (SII), 3 [Rattus norvegicus]
Length = 348
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 80/183 (43%), Gaps = 18/183 (9%)
Query: 182 LVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGH 241
L S D R++ E L AL + +++ +D CD ++A E ++++
Sbjct: 177 LASCYLTGDSVRDKCVEMLSAAL-----KAEDDFKDYGVNCD--KLASEIEDHIYQELKS 229
Query: 242 SFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKK 301
+ Y + RS + NL DP NP RR VL G + PE + KM++EEM SD R L + +
Sbjct: 230 TDMKYRNRVRSRISNLKDPRNPGLRRNVLSGTISPELIAKMTAEEMASDELRELRNAMTQ 289
Query: 302 ERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQ 356
E + + GG + C +C KK + Q SA + C C
Sbjct: 290 EAIREHQMAKTGGTTTDLLR-----CSKC-KKKNCTYNQVQTRSADEPMTTFVLCNECGN 343
Query: 357 YWE 359
W+
Sbjct: 344 RWK 346
>gi|340376666|ref|XP_003386853.1| PREDICTED: transcription elongation factor A protein 2-like
[Amphimedon queenslandica]
Length = 314
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 83/176 (47%), Gaps = 16/176 (9%)
Query: 189 NDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEV 248
++ R R+ +YKA+ K EV+ E +L ++ E +F ++ + Y+
Sbjct: 148 SNAVRNTCRDMVYKAMKKGLNEVNIEDDTRL-----YNLSAAIEDQIFSEFKDTNMKYKN 202
Query: 249 KYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRY 308
+ RS + N+ D +NP ++K++ G + P + KMS+EEM S+ ++L Q+ KE D
Sbjct: 203 RVRSRVSNIGDLKNPGLKQKIISGEISPARIAKMSTEEMASEDMKKLRQEYTKEAIRDSQ 262
Query: 309 LPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
+ G S CG+CG K+ ++ Q SA + C C W+
Sbjct: 263 MAVTQG-----TKSDLLKCGKCG-KRNCSYNQMQTRSADEPMTTFVLCNECGHRWK 312
>gi|224046246|ref|XP_002197689.1| PREDICTED: transcription elongation factor A protein 1 isoform 1
[Taeniopygia guttata]
Length = 304
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 11/144 (7%)
Query: 221 GCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALI 280
G D + E +F++ ++ Y+ + RS + NL D +NP+ R+ VL G++ P+
Sbjct: 165 GADEEELGSLIEEAIFQELKNTDMKYKNRVRSRIANLKDAKNPNLRKNVLCGNIPPDKFA 224
Query: 281 KMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGN 340
KM++EEM SD + + + + KE + + GG + + CG+C KK +
Sbjct: 225 KMTAEEMASDELKEMRKNLTKEAIREHQMAKTGG-----TQTDLFTCGKC-KKKNCTYTQ 278
Query: 341 DQNSSAKR-----IKCLNCYQYWE 359
Q SA + C C W+
Sbjct: 279 VQTRSADEPMTTFVVCNECGNRWK 302
>gi|147905221|ref|NP_001081593.1| TFIIS elongation factor [Xenopus laevis]
gi|1325970|emb|CAA66256.1| TFIIS elongation factor [Xenopus laevis]
gi|50414699|gb|AAH77765.1| XTFIIS.oB protein [Xenopus laevis]
Length = 303
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 66/133 (49%), Gaps = 11/133 (8%)
Query: 232 ESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDG 291
E +F+++ ++ Y+ + RS + NL D +NP+ RR VL G++ P+ +M++EEM SD
Sbjct: 175 EDAVFQEFKNTEAKYKNRIRSRIANLKDAKNPNLRRNVLCGNIAPDFFARMTAEEMASDE 234
Query: 292 SRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR--- 348
+ + + + KE + + GG + + CG+C KK + Q SA
Sbjct: 235 LKEMRKNLTKEAIREHQMAKTGG-----TETDLFSCGKC-KKKNCTYTQVQTRSADEPMT 288
Query: 349 --IKCLNCYQYWE 359
+ C C W+
Sbjct: 289 TFVFCNECGNRWK 301
>gi|57530393|ref|NP_001006387.1| transcription elongation factor A protein 1 [Gallus gallus]
gi|53136812|emb|CAG32735.1| hypothetical protein RCJMB04_34f23 [Gallus gallus]
Length = 304
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 11/144 (7%)
Query: 221 GCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALI 280
G D + E +F++ ++ Y+ + RS + NL D +NP+ R+ VL G++ P+
Sbjct: 165 GADEEELGSQIEEAIFQELKNTDMKYKNRVRSRIANLKDAKNPNLRKNVLCGNIPPDKFA 224
Query: 281 KMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGN 340
KM++EEM SD + + + + KE + + GG + + CG+C KK +
Sbjct: 225 KMTAEEMASDELKEMRKNLTKEAIREHQMAKTGG-----TQTDLFTCGKC-KKKNCTYTQ 278
Query: 341 DQNSSAKR-----IKCLNCYQYWE 359
Q SA + C C W+
Sbjct: 279 VQTRSADEPMTTFVVCNECGNRWK 302
>gi|349802183|gb|AEQ16564.1| putative transcription elongation factor a protein 1 [Pipa
carvalhoi]
Length = 208
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 59/116 (50%), Gaps = 5/116 (4%)
Query: 221 GCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALI 280
G D + E +F+++ ++ Y+ + RS + NL D +NP+ RR VL G++ +
Sbjct: 79 GADDEELGAQIEEAVFQEFKNTDAKYKNRVRSRIANLKDAKNPNLRRNVLCGNIATDRFA 138
Query: 281 KMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTT 336
+MS+EEM SD + + + + KE + + GG ++ CG+C K T
Sbjct: 139 RMSAEEMASDELKEMRKNLTKEAIREHQMARTGGTQTDLFS-----CGKCKKKNCT 189
>gi|384246623|gb|EIE20112.1| hypothetical protein COCSUDRAFT_67485 [Coccomyxa subellipsoidea
C-169]
Length = 1199
Score = 65.5 bits (158), Expect = 4e-08, Method: Composition-based stats.
Identities = 41/106 (38%), Positives = 61/106 (57%), Gaps = 7/106 (6%)
Query: 192 FRERIREKLYKALSKVSGEVDEEVQDKLNGCD---PIRVAITAESLMFEKWGHSFGTYEV 248
FRE+ R ++ ++L++ EE++ K + D P VA E+ MF+ +G Y
Sbjct: 337 FREKQRREMKESLTRAL----EELKAKGHEGDLPAPDMVAQRIEATMFKHFGGVNKEYGA 392
Query: 249 KYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRR 294
+ RSI FNL D NPDFR KVL G ++P L+ M ++EM S+ RR
Sbjct: 393 RNRSIQFNLADKSNPDFRAKVLRGDLEPAKLMTMHTQEMASELERR 438
>gi|260826962|ref|XP_002608434.1| hypothetical protein BRAFLDRAFT_231981 [Branchiostoma floridae]
gi|229293785|gb|EEN64444.1| hypothetical protein BRAFLDRAFT_231981 [Branchiostoma floridae]
Length = 130
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 61/120 (50%), Gaps = 4/120 (3%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
Y+ + RS NL DP NP+ RR+++ G + P+ + MS++EM SD ++ +Q+ +E
Sbjct: 12 YKNRVRSRAANLKDPRNPELRRRLIQGEITPQQMATMSAQEMASDEVKKFRRQVSEESIQ 71
Query: 306 DRYLPWKGGYLGPIYHSTRYMCGR--CGHKKTTNHGNDQNSSAKRIKCLNCYQYWESTTA 363
R +P G + ++ CGR C + + D ++ + C++C W+ T
Sbjct: 72 RRQVPHADGTMTDMFKCEN--CGRENCCYNQYRGFSADGPIASPFVFCMDCGNRWKVKTC 129
>gi|348588983|ref|XP_003480244.1| PREDICTED: LOW QUALITY PROTEIN: PHD finger protein 3-like [Cavia
porcellus]
Length = 2019
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 78/171 (45%), Gaps = 13/171 (7%)
Query: 128 EVVKVRRVDQKGAPRSKKLVGSEFIVTEETNSLDNVDAEAIRE---------EKPASAVV 178
++ +R++ Q PR SE I E TN + E EK +V
Sbjct: 836 QLAPLRKMGQPVLPRRSSEEKSEKIPKETTNIICTASKPGTHEKQEVKRKKVEKGVPSVH 895
Query: 179 PQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEK 238
P + D R+ +R L L K E + +V ++ +VA E +F
Sbjct: 896 PAAPRASKPSADQIRQSVRHSLKDILMKRLTESNLKVPEEKAA----KVATKIEKELFSF 951
Query: 239 WGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
+ + Y+ KYRS++FNL DP+N +KVL G V P+ LIKMSSEE+ S
Sbjct: 952 FRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIKMSSEELAS 1002
>gi|148697997|gb|EDL29944.1| transcription elongation factor A (SII), 3 [Mus musculus]
Length = 347
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 78/175 (44%), Gaps = 18/175 (10%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVK 249
D R++ E L AL + ++ +D CD ++A E+ ++++ + Y +
Sbjct: 184 DSVRDKCVEMLSAAL-----KAEDNFKDYGVNCD--KLASEIETHIYQELKSTDMKYRNR 236
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYL 309
RS + NL DP NP RR VL G + PE + KM++EEM SD R L + +E + +
Sbjct: 237 VRSRISNLKDPRNPGLRRNVLSGAISPELIAKMTAEEMASDELRELRNAMTQEAIREHQM 296
Query: 310 PWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
GG + C +C KK + Q SA + C C W+
Sbjct: 297 AKTGGTTTDLLR-----CSKC-KKKNCTYNQVQTRSADEPMTTFVLCNECGNRWK 345
>gi|440804552|gb|ELR25429.1| transcription elongation factor SII, hS-II-T1 isoform 8, putative
[Acanthamoeba castellanii str. Neff]
Length = 188
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 83/179 (46%), Gaps = 24/179 (13%)
Query: 186 IKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGT 245
IK ND R++ E L +AL + + D +A+ E+ MF+ +G +
Sbjct: 26 IKLNDATRQKCFEMLAEALEQSESDADY-----------FELALDIEAEMFKLFGETNPN 74
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
Y+ K+R + NL + +N D R VL GH+ PE L +M+S+E+ S ++++++R +
Sbjct: 75 YKAKFRQLFMNLKNVKNHDLRLGVLNGHISPERLCQMTSQELAS-------KELQEQRKA 127
Query: 306 DRYLPWKGGYLGPIYHSTRYM--CGRCGHKKTTNHGNDQNSS----AKRIKCLNCYQYW 358
K G +T M C +C ++ T + S+ ++C NC W
Sbjct: 128 LEEACLKEAIRGGQKQATTNMFRCHKCKKRECTYYQLQTRSADEPMTTFVQCTNCNNRW 186
>gi|194760841|ref|XP_001962641.1| GF15561 [Drosophila ananassae]
gi|190616338|gb|EDV31862.1| GF15561 [Drosophila ananassae]
Length = 315
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 87/197 (44%), Gaps = 23/197 (11%)
Query: 169 REEKPASAVVPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGC-DPIRV 227
REEK AS+ Q D R + RE L AL GEV E GC +P +
Sbjct: 134 REEKRASS--SQTSFPSGGMTDAVRLKCREMLTTALK--MGEVPE-------GCAEPEEM 182
Query: 228 AITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEM 287
A E ++ ++ ++ Y+ + RS + NL DP+NP R + G V + L KM+ EEM
Sbjct: 183 AAELEDAIYAEFKNTDMKYKNRIRSRVANLKDPKNPGLRGNFMCGAVSAKQLAKMTPEEM 242
Query: 288 VSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAK 347
SD ++L ++ KE +D L G + CG+C K+ + Q SA
Sbjct: 243 ASDEMKKLREKFVKEAINDAQLATVQGTKTDLLK-----CGKC-KKRNCTYNQLQTRSAD 296
Query: 348 R-----IKCLNCYQYWE 359
+ C C W+
Sbjct: 297 EPMTTFVMCNECGNRWK 313
>gi|449665814|ref|XP_002165403.2| PREDICTED: transcription elongation factor A protein 1-like [Hydra
magnipapillata]
Length = 287
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 68/142 (47%), Gaps = 11/142 (7%)
Query: 223 DPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKM 282
DP +A E+ +F + + Y K +S + NL D NP+ + V+ G + PE KM
Sbjct: 150 DPTNIAAAIENEIFMCFKDTNIKYRNKIKSKVMNLRDKRNPELCQLVIEGVITPERFAKM 209
Query: 283 SSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQ 342
++EEM SD ++ ++I +E + L G + ++ CG+CG + TT + Q
Sbjct: 210 TAEEMASDEMKKERKKITEEAIKEHQLATTAG-----TATGQFKCGKCGKRNTT-YNQVQ 263
Query: 343 NSSAKR-----IKCLNCYQYWE 359
SA + C+ C W+
Sbjct: 264 TRSADEPMTTFVYCIECGNRWK 285
>gi|449494108|ref|XP_004175278.1| PREDICTED: transcription elongation factor A protein 1 isoform 2
[Taeniopygia guttata]
Length = 267
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 84/192 (43%), Gaps = 19/192 (9%)
Query: 173 PASAVVPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAE 232
P+++ +P +D R + RE L AL + G D + E
Sbjct: 88 PSNSFIPS-FPRAPSTSDSVRVKCREMLSAALRTGDDYI-------AIGADEEELGSLIE 139
Query: 233 SLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGS 292
+F++ ++ Y+ + RS + NL D +NP+ R+ VL G++ P+ KM++EEM SD
Sbjct: 140 EAIFQELKNTDMKYKNRVRSRIANLKDAKNPNLRKNVLCGNIPPDKFAKMTAEEMASDEL 199
Query: 293 RRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR---- 348
+ + + + KE + + GG + + CG+C KK + Q SA
Sbjct: 200 KEMRKNLTKEAIREHQMAKTGG-----TQTDLFTCGKC-KKKNCTYTQVQTRSADEPMTT 253
Query: 349 -IKCLNCYQYWE 359
+ C C W+
Sbjct: 254 FVVCNECGNRWK 265
>gi|326917624|ref|XP_003205096.1| PREDICTED: transcription elongation factor A protein 1-like
[Meleagris gallopavo]
Length = 335
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 11/144 (7%)
Query: 221 GCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALI 280
G D + E +F++ ++ Y+ + RS + NL D +NP+ R+ VL G++ P+
Sbjct: 165 GADEEELGSQIEEAIFQELKNTDMKYKNRVRSRIANLKDAKNPNLRKNVLCGNIPPDKFA 224
Query: 281 KMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGN 340
KM++EEM SD + + + + KE + + GG + + CG+C KK +
Sbjct: 225 KMTAEEMASDELKEMRKNLTKEAIREHQMAKTGG-----TQTDLFTCGKC-KKKNCTYTQ 278
Query: 341 DQNSSAKR-----IKCLNCYQYWE 359
Q SA + C C W+
Sbjct: 279 VQTRSADEPMTTFVVCNECGNRWK 302
>gi|351711851|gb|EHB14770.1| PHD finger protein 3 [Heterocephalus glaber]
Length = 2028
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 78/172 (45%), Gaps = 14/172 (8%)
Query: 128 EVVKVRRVDQKGAPRSKKLVGSEFIVTEETNSL----------DNVDAEAIREEKPASAV 177
++ +RR Q PR SE I E TN + + + + + EK V
Sbjct: 842 QLAPLRRTGQPALPRRSSEEKSEKIPKEATNIICTAPKPGSTHEKQEPKKKKAEKGTPGV 901
Query: 178 VPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFE 237
P + D R+ +R L L K + + +V ++ +VA E +F
Sbjct: 902 HPAAAPTSKPSADQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFS 957
Query: 238 KWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
+ + Y+ KYRS++FNL DP+N +KVL G V P+ LIKMS EE+ S
Sbjct: 958 FFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIKMSPEELAS 1009
>gi|326932945|ref|XP_003212571.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor A
protein 3-like [Meleagris gallopavo]
Length = 466
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 81/180 (45%), Gaps = 20/180 (11%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVK 249
D R++ E L AL ++ GE D V++ I A + F++ + Y +
Sbjct: 240 DSVRDKCVEMLTAAL-RMDGEWDGMVRE-------IXFPXLAPHI-FQELKSTDMKYRNR 290
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYL 309
RS + NL DP+NP+ RR VL G + P + +M++EEM SD + L + +E + +
Sbjct: 291 VRSRISNLKDPKNPNLRRNVLCGAIAPALIARMTAEEMASDELKELRNAMTQEAIREHQM 350
Query: 310 PWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWESTTAL 364
GG + ++ CG+C KK + Q SA + C C W+ A
Sbjct: 351 AKTGGTVTDLFQ-----CGKC-KKKNCTYNQVQTRSADEPMTTFVLCNECGNRWKQDVAF 404
>gi|67588103|ref|XP_665338.1| transcription elongation factor TFIIS.h [Cryptosporidium hominis
TU502]
gi|54655975|gb|EAL35108.1| transcription elongation factor TFIIS.h [Cryptosporidium hominis]
Length = 332
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 84/178 (47%), Gaps = 13/178 (7%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKW----GHSFGT 245
D R++ R L+KA+ ++ + C+ +A ES++ ++ +S
Sbjct: 159 DVMRDKARHFLWKAMVTGVPYSQAKLMKESQVCE---IAAEIESVLHREYIVKGDNSVRD 215
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
Y ++ ++I +NL D +NP+ K+ +G + PE + +M S EM SD ++ ++ K+E
Sbjct: 216 YNLQLKTIKWNLSDLKNPELNSKLYVGKITPEEIARMQSREMASDAKQKEREKHKQESLE 275
Query: 306 DRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSS----AKRIKCLNCYQYWE 359
W L I ++ CG+C KTT + S+ ++CLNC W+
Sbjct: 276 ACQSDWDLRNL--IQKEGQFTCGKCKTNKTTYYQMQTRSADEPMTTFVRCLNCGNRWK 331
>gi|148223439|ref|NP_001081812.1| transcription elongation factor A (SII), 3 [Xenopus laevis]
gi|1373400|gb|AAC60115.1| transcription elongation factor type xTFIIS.l [Xenopus laevis]
gi|46249530|gb|AAH68738.1| LOC398066 protein [Xenopus laevis]
Length = 292
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 76/176 (43%), Gaps = 18/176 (10%)
Query: 189 NDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEV 248
+D R + RE L L V G D +A E ++F + ++ Y+
Sbjct: 128 SDSVRTKCREMLIAVLQTDGDHV-------AIGADCELLAAQIEEVVFRELQNTDMKYKN 180
Query: 249 KYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRY 308
+ RS + NL D +NPD R+ VL G + PE + MS EEM S+ + + ++I K +
Sbjct: 181 RIRSRISNLKDSKNPDLRKNVLCGIITPEQIAIMSCEEMASNELKEMRKEITKASIQEHQ 240
Query: 309 LPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
+ GG S + CG+C KK + Q SA + C C W+
Sbjct: 241 MGKTGG-----TQSDLFTCGKC-KKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 290
>gi|401887634|gb|EJT51614.1| positive transcription elongation factor [Trichosporon asahii var.
asahii CBS 2479]
Length = 300
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 8/129 (6%)
Query: 227 VAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEE 286
+ I E+ K+ +S Y K RS+ N+ D NP R +++LG V P+ +++MS EE
Sbjct: 179 IGIEREAFKLLKF-NSGNEYRAKMRSLFLNIKDKGNPGLRNEIVLGQVTPDKVVRMSKEE 237
Query: 287 MVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHST-RYMCGRCGHKKTTNHGNDQNSS 345
M S+ R LN+++ +++ L +K +G T + C RC +K T + S+
Sbjct: 238 MASESVRLLNEKL-----AEKNL-FKAKAVGVTQAETDAFKCSRCQQRKCTYYQMQTRSA 291
Query: 346 AKRIKCLNC 354
+ + C C
Sbjct: 292 DEPMTCGGC 300
>gi|332023706|gb|EGI63930.1| Transcription elongation factor S-II [Acromyrmex echinatior]
Length = 288
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 90/199 (45%), Gaps = 21/199 (10%)
Query: 168 IREEKPASAVV-PQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGC-DPI 225
++EEKP + Q D R + RE L AL V G+V ++GC P
Sbjct: 102 VKEEKPFKDIQRKQSSFPAPITTDAVRLKCRELLAAALH-VDGKV-------IDGCASPE 153
Query: 226 RVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSE 285
+A E ++ ++ ++ Y+ + RS + NL D +NP+ R L+G + P L M++E
Sbjct: 154 ELAEELEEAIYAEFKNTDSRYKNRVRSRVANLRDVKNPNLRTNFLVGAITPARLAVMTAE 213
Query: 286 EMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSS 345
EM SD ++L +Q KKE +D L G + CG+C K+ + Q S
Sbjct: 214 EMASDEIKQLREQFKKEAINDAQLATVQGTKTDLLK-----CGKC-KKRNCTYNQVQTRS 267
Query: 346 AKR-----IKCLNCYQYWE 359
A + C C W+
Sbjct: 268 ADEPMTTFVLCNECGNRWK 286
>gi|125987179|ref|XP_001357352.1| GA17632 [Drosophila pseudoobscura pseudoobscura]
gi|195155927|ref|XP_002018852.1| GL25727 [Drosophila persimilis]
gi|54645683|gb|EAL34421.1| GA17632 [Drosophila pseudoobscura pseudoobscura]
gi|194115005|gb|EDW37048.1| GL25727 [Drosophila persimilis]
Length = 313
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 79/176 (44%), Gaps = 21/176 (11%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGC-DPIRVAITAESLMFEKWGHSFGTYEV 248
D R + RE L AL GEV E GC +P +A E ++ ++ ++ Y+
Sbjct: 151 DAVRLKCREMLTTALK--MGEVPE-------GCAEPEEMAAELEDAIYSEFKNTDMKYKN 201
Query: 249 KYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRY 308
+ RS + NL DP+NP R + G V + L KM+ EEM SD ++L ++ KE +D
Sbjct: 202 RIRSRVANLKDPKNPGLRGNFMCGAVSAKQLAKMTPEEMASDEMKKLREKFVKEAINDAQ 261
Query: 309 LPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
L G + CG+C K+ + Q SA + C C W+
Sbjct: 262 LATVQGTKTDLLK-----CGKC-KKRNCTYNQLQTRSADEPMTTFVMCNECGNRWK 311
>gi|426241819|ref|XP_004014783.1| PREDICTED: transcription elongation factor A protein 2 [Ovis aries]
Length = 336
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 75/175 (42%), Gaps = 18/175 (10%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVK 249
D R + RE L AL V G D +A E +F G++ Y+ +
Sbjct: 173 DAVRTKCREMLTAALQTDHDHV-------AIGADCECLAGQIEECIFRDVGNTDMKYKNR 225
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYL 309
RS L NL D +NP RR VL G + P+ + M+SEEM SD + + + + KE + +
Sbjct: 226 VRSRLSNLKDAKNPGLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIREHQM 285
Query: 310 PWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
GG + + CG+C KK + Q S+ + C C W+
Sbjct: 286 ARTGG-----TQTDLFTCGKC-RKKNCTYTQVQTRSSDEPMTTFVVCNECGNRWK 334
>gi|157888820|dbj|BAF80886.1| tissue-specific transcription factor S-II [Mus musculus]
Length = 347
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 77/175 (44%), Gaps = 18/175 (10%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVK 249
D R++ E L AL + ++ +D CD ++A E ++++ + Y +
Sbjct: 184 DSVRDKCVEMLSAAL-----KAEDNFKDYGVNCD--KLASEIEDHIYQELKSTDMKYRNR 236
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYL 309
RS + NL DP NP RR VL G + PE + KM++EEM SD R L + +E + +
Sbjct: 237 VRSRISNLKDPRNPGLRRNVLSGAISPELIAKMTAEEMASDELRELRNAMTQEAIREHQM 296
Query: 310 PWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
GG + C +C KK + Q SA + C C W+
Sbjct: 297 AKTGGTTTDLLR-----CSKC-KKKNCTYNQVQTRSADEPMTTFVLCNECGNRWK 345
>gi|32189438|ref|NP_035672.1| transcription elongation factor A protein 3 [Mus musculus]
gi|28381402|sp|P23881.3|TCEA3_MOUSE RecName: Full=Transcription elongation factor A protein 3; AltName:
Full=Transcription elongation factor S-II protein 3;
AltName: Full=Transcription elongation factor TFIIS.h
gi|3288547|emb|CAA11392.1| transcription elongation factor TFIIS.h [Mus musculus]
gi|12840988|dbj|BAB25037.1| unnamed protein product [Mus musculus]
gi|14789853|gb|AAH10807.1| Transcription elongation factor A (SII), 3 [Mus musculus]
Length = 347
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 77/175 (44%), Gaps = 18/175 (10%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVK 249
D R++ E L AL + ++ +D CD ++A E ++++ + Y +
Sbjct: 184 DSVRDKCVEMLSAAL-----KAEDNFKDYGVNCD--KLASEIEDHIYQELKSTDMKYRNR 236
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYL 309
RS + NL DP NP RR VL G + PE + KM++EEM SD R L + +E + +
Sbjct: 237 VRSRISNLKDPRNPGLRRNVLSGAISPELIAKMTAEEMASDELRELRNAMTQEAIREHQM 296
Query: 310 PWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
GG + C +C KK + Q SA + C C W+
Sbjct: 297 AKTGGTTTDLLR-----CSKC-KKKNCTYNQVQTRSADEPMTTFVLCNECGNRWK 345
>gi|392572626|gb|EIW65771.1| hypothetical protein TREMEDRAFT_72529 [Tremella mesenterica DSM
1558]
Length = 335
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 75/158 (47%), Gaps = 18/158 (11%)
Query: 212 DEEVQDK--------LNGCDPIRVAITAESLMFEKWGHSFGT-YEVKYRSILFNLMDPEN 262
DE V+DK L G ++ E+ +F++ G Y K RS+ NL D N
Sbjct: 184 DESVRDKCVEMIYNALAGDSTAERSVAIEAAVFKQQKSQSGNEYRAKMRSLFLNLKDKGN 243
Query: 263 PDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHS 322
P R +++LG++ E L +S E+M S+ R +N++I A+D +K +G
Sbjct: 244 PGLRNEIVLGYLTAEKLASLSKEDMASESIRAMNEKI----ANDNL--FKAKAVGETQAE 297
Query: 323 T-RYMCGRCGHKKTTNHGNDQNSSAKRIKCLNCYQYWE 359
T + CGRC +K T + S+ + + NC W+
Sbjct: 298 TDAFKCGRCQQRKCTYYQMQTRSADEPM--TNCGNRWK 333
>gi|66361609|ref|XP_627328.1| transcription elongation factor TFIIS [Cryptosporidium parvum Iowa
II]
gi|46228708|gb|EAK89578.1| transcription elongation factor TFIIS [Cryptosporidium parvum Iowa
II]
Length = 332
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 84/178 (47%), Gaps = 13/178 (7%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKW----GHSFGT 245
D R++ R L+KA+ ++ + C+ +A ES++ ++ +S
Sbjct: 159 DVMRDKARHFLWKAMVTGVPYSQAKLMKESQVCE---IAAEIESVLHREYIVKGDNSVRD 215
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
Y ++ ++I +NL D +NP+ K+ +G + PE + +M S EM SD ++ ++ K+E
Sbjct: 216 YNLQLKTIKWNLSDLKNPELNSKLYVGKITPEEIARMQSREMASDAKQKEREKHKQESLE 275
Query: 306 DRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSS----AKRIKCLNCYQYWE 359
W L I ++ CG+C KTT + S+ ++CLNC W+
Sbjct: 276 ACQSDWDLRNL--IQKEGQFTCGKCKTNKTTYYQMQTRSADEPMTTFVRCLNCGNRWK 331
>gi|12832213|dbj|BAB22010.1| unnamed protein product [Mus musculus]
Length = 347
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 77/175 (44%), Gaps = 18/175 (10%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVK 249
D R++ E L AL + ++ +D CD ++A E ++++ + Y +
Sbjct: 184 DSVRDKCVEMLSAAL-----KAEDNFKDYGVNCD--KLASEIEDHIYQELKSTDMKYRNR 236
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYL 309
RS + NL DP NP RR VL G + PE + KM++EEM SD R L + +E + +
Sbjct: 237 VRSRISNLKDPRNPGLRRNVLSGAISPELIAKMTAEEMASDELRELRNAMTQEAIREHQM 296
Query: 310 PWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
GG + C +C KK + Q SA + C C W+
Sbjct: 297 AKTGGTTTDLLR-----CSKC-KKKNCTYNQVQTRSADEPMTTFVLCNECGNRWK 345
>gi|389743667|gb|EIM84851.1| transcription elongation factor [Stereum hirsutum FP-91666 SS1]
Length = 299
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 81/180 (45%), Gaps = 26/180 (14%)
Query: 190 DYFRERIREK----LYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGT 245
D R++ R+K LY AL+ SG E + + A AE +F + + G
Sbjct: 134 DVTRDKTRDKCIELLYDALAFDSGAPSELI---------FQRAKAAEDAVFHTFNGTTGD 184
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
Y+ K RS++ NL D +NP R V+ G + L KM+S++M S+ + +++IK+E
Sbjct: 185 YKTKIRSLVVNLKDKKNPGLRESVVSGDLPAAKLAKMTSQDMASEERKNADKKIKEENM- 243
Query: 306 DRYLPWKG-GYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
+K G + + CGRC +K + Q SA + C C W+
Sbjct: 244 -----FKALGAEEQQAETDAFQCGRCKQRK-CRYRQAQTRSADEPMTTFVTCTVCNNRWK 297
>gi|327271917|ref|XP_003220733.1| PREDICTED: transcription elongation factor A protein 2-like [Anolis
carolinensis]
Length = 327
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 79/179 (44%), Gaps = 19/179 (10%)
Query: 186 IKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGT 245
I C D R + RE L AL + V G D +A E +++ ++
Sbjct: 133 ITC-DTVRSKCREMLTSALQTDNDYV-------AIGVDCEEMAAQIEEFIYQDVKNTDLK 184
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
Y+ + RS + NL D +NPD R+ VL G + PE + M+SEEM S+ + + + + KE
Sbjct: 185 YKNRVRSRISNLKDSKNPDLRKNVLCGVITPEQIAVMTSEEMASNELKEIRKAMTKEAIR 244
Query: 306 DRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
+ + GG + + CG+C KK + Q S+ + C C W+
Sbjct: 245 EHQMAKTGG-----TQTDLFTCGKC-RKKNCTYTQVQTRSSDEPMTTFVVCNECGNRWK 297
>gi|383847731|ref|XP_003699506.1| PREDICTED: transcription elongation factor S-II-like isoform 1
[Megachile rotundata]
Length = 312
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 92/208 (44%), Gaps = 22/208 (10%)
Query: 159 SLDNVDAEAIREEKPASAVV-PQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQD 217
S+D D + ++EEKP + Q D R + RE L AL +V G E
Sbjct: 118 SIDGNDVK-MKEEKPHKDIQRKQSTFPAPTTTDAVRLKCRELLAAAL-RVDGNTIE---- 171
Query: 218 KLNGC-DPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKP 276
GC P +A E ++ ++ ++ Y+ + RS + NL D +NP+ R + G + P
Sbjct: 172 ---GCASPEELAEELEEAIYAEFKNTDNRYKNRVRSRVANLRDAKNPNLRTNFIAGAITP 228
Query: 277 EALIKMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTT 336
L M++EEM SD ++L +Q KKE +D L G + CG+C K+
Sbjct: 229 ARLAVMTAEEMASDEIKQLREQFKKEAINDAQLATVQGTKTDLLK-----CGKC-KKRNC 282
Query: 337 NHGNDQNSSAKR-----IKCLNCYQYWE 359
+ Q SA + C C W+
Sbjct: 283 TYNQVQTRSADEPMTTFVLCNECGNRWK 310
>gi|41053387|ref|NP_956288.1| transcription elongation factor A protein 1 [Danio rerio]
gi|31418820|gb|AAH53177.1| Transcription elongation factor A (SII), 1 [Danio rerio]
gi|182891554|gb|AAI64750.1| Tcea1 protein [Danio rerio]
Length = 309
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 16/156 (10%)
Query: 177 VVPQKLVSMIK----CNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAE 232
V P L++ +D R + RE L AL + ++ + CD + I E
Sbjct: 129 VTPNTLIATFPRAPGTSDSVRIKCREMLSNAL-----QTGDDYITIGSDCDELGAQI--E 181
Query: 233 SLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGS 292
+F ++ ++ Y+ + RS + NL D +NP+ RR VL G+V P+ + KM++EEM SD
Sbjct: 182 ECIFLEFKNTDMKYKNRVRSRISNLKDAKNPNLRRNVLCGNVSPDRIAKMTAEEMASDEL 241
Query: 293 RRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCG 328
+ + + + KE D + GG + + CG
Sbjct: 242 KEMRKNLTKEAIRDHQVATSGG-----TQTDLFTCG 272
>gi|383847733|ref|XP_003699507.1| PREDICTED: transcription elongation factor S-II-like isoform 2
[Megachile rotundata]
Length = 311
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 92/208 (44%), Gaps = 22/208 (10%)
Query: 159 SLDNVDAEAIREEKPASAVV-PQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQD 217
S+D D + ++EEKP + Q D R + RE L AL +V G E
Sbjct: 117 SIDGNDVK-MKEEKPHKDIQRKQSTFPAPTTTDAVRLKCRELLAAAL-RVDGNTIE---- 170
Query: 218 KLNGC-DPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKP 276
GC P +A E ++ ++ ++ Y+ + RS + NL D +NP+ R + G + P
Sbjct: 171 ---GCASPEELAEELEEAIYAEFKNTDNRYKNRVRSRVANLRDAKNPNLRTNFIAGAITP 227
Query: 277 EALIKMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTT 336
L M++EEM SD ++L +Q KKE +D L G + CG+C K+
Sbjct: 228 ARLAVMTAEEMASDEIKQLREQFKKEAINDAQLATVQGTKTDLLK-----CGKC-KKRNC 281
Query: 337 NHGNDQNSSAKR-----IKCLNCYQYWE 359
+ Q SA + C C W+
Sbjct: 282 TYNQVQTRSADEPMTTFVLCNECGNRWK 309
>gi|308808340|ref|XP_003081480.1| putative elongation factor (ISS) [Ostreococcus tauri]
gi|116059943|emb|CAL56002.1| putative elongation factor (ISS) [Ostreococcus tauri]
Length = 126
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 63/130 (48%), Gaps = 11/130 (8%)
Query: 235 MFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRR 294
M KW Y+ K R + FN+ DP+NPD R + +G + + LI ++ EE+ S+ R+
Sbjct: 1 MTAKWPEGGKDYKAKVRQLAFNMRDPKNPDLRTNLAMGEISADVLIDLTPEELGSNERRQ 60
Query: 295 LNQQIKKERASDRYLPWKGGYLGPIYHST-RYMCGRCGHKKTTNHGNDQNSS----AKRI 349
N++I++ + W+ ST + CG+C +K T + S+ +
Sbjct: 61 ANEKIRE------FAEWEAVRGQQQEASTDAFKCGKCKQRKCTYYQLQTRSADEPMTTFV 114
Query: 350 KCLNCYQYWE 359
C+NC W+
Sbjct: 115 TCVNCGNRWK 124
>gi|255083388|ref|XP_002504680.1| predicted protein [Micromonas sp. RCC299]
gi|226519948|gb|ACO65938.1| predicted protein [Micromonas sp. RCC299]
Length = 114
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 9/118 (7%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
Y+ K R + FNL DP+NPD RR V G + P+ L+ + EE+ SD R N I++ +
Sbjct: 1 YKAKVRQLSFNLKDPKNPDLRRSVADGLISPKVLLDLKPEELGSDERRNENAAIREAATA 60
Query: 306 DRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSS----AKRIKCLNCYQYWE 359
+ K + + CG+CG +K T + S+ + C+NC W+
Sbjct: 61 EAVRGQKQQ-----ASTDAFKCGKCGQRKCTYYQLQTRSADEPMTTFVTCVNCDNRWK 113
>gi|348544613|ref|XP_003459775.1| PREDICTED: transcription elongation factor A protein 2-like
[Oreochromis niloticus]
Length = 308
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 83/176 (47%), Gaps = 18/176 (10%)
Query: 189 NDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEV 248
D R + RE L AL + D++ + C+ + I E +F+++ + Y+
Sbjct: 139 TDCVRSKCRELLVVAL-----QTDDDHKAIRVDCEHLAAQI--EEQIFQEFKSTDMKYKT 191
Query: 249 KYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRY 308
+ RS + NL D +NP+ RR VL G++ P + M++EEM S +++ + + KE +
Sbjct: 192 RLRSRISNLKDQKNPELRRNVLCGNISPHRIACMTAEEMASAELKQMREALTKESIREHQ 251
Query: 309 LPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
L GG + ++C +C H K+ + Q SA + C +C W+
Sbjct: 252 LSKVGG-----TETDMFICSKC-HGKSCTYTQVQTRSADEPMTTFVLCNDCGNRWK 301
>gi|387015674|gb|AFJ49956.1| Transcription elongation factor A protein 1 [Crotalus adamanteus]
Length = 304
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 11/144 (7%)
Query: 221 GCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALI 280
G D + E +F++ ++ Y+ + RS + NL D +NP+ R+ VL G++ P+
Sbjct: 165 GADEEELGSQIEEAIFQELKNTDMKYKNRVRSRIANLKDTKNPNLRKNVLCGNILPDRFA 224
Query: 281 KMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGN 340
KM++EEM SD + + + + KE + + GG ++ CG+C KK +
Sbjct: 225 KMTAEEMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFS-----CGKC-KKKNCTYTQ 278
Query: 341 DQNSSAKR-----IKCLNCYQYWE 359
Q SA + C C W+
Sbjct: 279 VQTRSADEPMTTFVVCNECGNRWK 302
>gi|354500641|ref|XP_003512407.1| PREDICTED: transcription elongation factor A protein 2-like
[Cricetulus griseus]
Length = 299
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 79/174 (45%), Gaps = 9/174 (5%)
Query: 186 IKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGT 245
I C D R + RE L AL + D + K G D ++ E +F G++
Sbjct: 133 ITC-DAVRNKCREMLTLAL-----QTDHD--HKAVGVDCEHLSAQIEECIFLDVGNTDMK 184
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
Y+ + RS + NL D +NP RR VL G + P+ + M+SEEM SD + + + + KE
Sbjct: 185 YKNRVRSRISNLKDAKNPGLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIR 244
Query: 306 DRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKRIKCLNCYQYWE 359
+ + GG ++ ++ C + + +D+ + + C C W+
Sbjct: 245 EHQMARTGGTQTDLFTCSKCKKKNCTYTQVQTRSSDEPMTT-YVVCNECGNRWK 297
>gi|240972273|ref|XP_002400972.1| transcription factor S-II, putative [Ixodes scapularis]
gi|215490968|gb|EEC00609.1| transcription factor S-II, putative [Ixodes scapularis]
Length = 255
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 74/167 (44%), Gaps = 20/167 (11%)
Query: 193 RERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVKY-- 250
R + RE + AL + D +GCD +A E + W FG +KY
Sbjct: 94 RLKCRELISSAL---------KCDDMPDGCDLDGLAAKIEEYILS-WHCEFGDTNMKYKN 143
Query: 251 --RSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRY 308
RS + NL D +NP+ R VL G + P+ + +M+++EM SD +++ Q+ KE +D
Sbjct: 144 RVRSRVSNLKDSKNPNLRLNVLHGAIDPDRIARMTADEMASDEMKQMRQKFTKEAINDHQ 203
Query: 309 LPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKRIKCLNCY 355
+ GG + CG+C K + Q SA CY
Sbjct: 204 MAVTGGTKTDLLK-----CGKC-RKSNCTYNQVQTRSADEPMTTFCY 244
>gi|41350335|ref|NP_003187.1| transcription elongation factor A protein 3 [Homo sapiens]
gi|397478949|ref|XP_003810796.1| PREDICTED: transcription elongation factor A protein 3 [Pan
paniscus]
gi|28380172|sp|O75764.2|TCEA3_HUMAN RecName: Full=Transcription elongation factor A protein 3; AltName:
Full=Transcription elongation factor S-II protein 3;
AltName: Full=Transcription elongation factor TFIIS.h
gi|27469901|gb|AAH41613.1| Transcription elongation factor A (SII), 3 [Homo sapiens]
gi|158261567|dbj|BAF82961.1| unnamed protein product [Homo sapiens]
gi|167773999|gb|ABZ92434.1| transcription elongation factor A (SII), 3 [synthetic construct]
gi|306921457|dbj|BAJ17808.1| transcription elongation factor A (SII), 3 [synthetic construct]
gi|410220416|gb|JAA07427.1| transcription elongation factor A (SII), 3 [Pan troglodytes]
gi|410263304|gb|JAA19618.1| transcription elongation factor A (SII), 3 [Pan troglodytes]
gi|410328351|gb|JAA33122.1| transcription elongation factor A (SII), 3 [Pan troglodytes]
Length = 348
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 85/198 (42%), Gaps = 24/198 (12%)
Query: 173 PASAVVPQKLVSMI---KC---NDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIR 226
P+S + P SM C D R++ E L AL + D++ +D CD +
Sbjct: 162 PSSPLTPTFASSMCLLAPCYLTGDSVRDKCVEMLSAAL-----KADDDYKDYGVNCD--K 214
Query: 227 VAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEE 286
+A E ++++ + Y + RS + NL DP NP RR VL G + + KM++EE
Sbjct: 215 MASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEE 274
Query: 287 MVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSA 346
M SD R L + +E + + GG ++ C +C KK + Q SA
Sbjct: 275 MASDELRELRNAMTQEAIREHQMAKTGGTTTDLFQ-----CSKC-KKKNCTYNQVQTRSA 328
Query: 347 KR-----IKCLNCYQYWE 359
+ C C W+
Sbjct: 329 DEPMTTFVLCNECGNRWK 346
>gi|145351408|ref|XP_001420072.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580305|gb|ABO98365.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 173
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 78/182 (42%), Gaps = 18/182 (9%)
Query: 185 MIKCNDYFRERIREKLYKALS--KVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHS 242
+ + ND R+R RE AL+ G+++ KL + E+ M KW
Sbjct: 1 LTRVNDAARDRTREIFADALALCVTDGKIESVDAKKLAS-----IVDQIENSMTAKWPSG 55
Query: 243 FGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKE 302
Y+ K R + FNL D +NPD R + G + LI +S EE+ S+ R N++I++
Sbjct: 56 GKDYKAKVRQLAFNLKDAKNPDLRTNLATGEISAGVLIDLSPEELGSNERRNANERIRE- 114
Query: 303 RASDRYLPWKGGYLGPIYHST-RYMCGRCGHKKTTNHGNDQNSS----AKRIKCLNCYQY 357
W+ ST + CG+C +K T + S+ + C+ C
Sbjct: 115 -----LAEWEAVRGQQQEASTDAFKCGKCKQRKCTYYQLQTRSADEPMTTFVTCVECGNR 169
Query: 358 WE 359
W+
Sbjct: 170 WK 171
>gi|327289455|ref|XP_003229440.1| PREDICTED: transcription elongation factor A protein 3-like [Anolis
carolinensis]
Length = 404
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 82/177 (46%), Gaps = 18/177 (10%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVK 249
D R++ E + AL ++D++ ++ CD ++A E ++++ + Y +
Sbjct: 185 DSVRDKCIEMISAAL-----KMDDDYKEFGVNCD--KMAAEIEDHIYQELKGTDMKYRNR 237
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYL 309
RS + NL DP+NP RR VL G + + KM++EEM SD + L + +E + +
Sbjct: 238 VRSRISNLKDPKNPGLRRNVLCGAISAGRIAKMTAEEMASDELKELRNAMTQEAIREHQM 297
Query: 310 PWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWEST 361
GG ++ CG+C KK + Q SA + C C W++T
Sbjct: 298 AKTGGTATDLFQ-----CGKC-KKKNCTYNQVQTRSADEPMTTFVLCNECGNRWKAT 348
>gi|344254454|gb|EGW10558.1| Transcription elongation factor A protein 2 [Cricetulus griseus]
Length = 255
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 79/174 (45%), Gaps = 9/174 (5%)
Query: 186 IKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGT 245
I C D R + RE L AL + D + K G D ++ E +F G++
Sbjct: 89 ITC-DAVRNKCREMLTLAL-----QTDHD--HKAVGVDCEHLSAQIEECIFLDVGNTDMK 140
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
Y+ + RS + NL D +NP RR VL G + P+ + M+SEEM SD + + + + KE
Sbjct: 141 YKNRVRSRISNLKDAKNPGLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIR 200
Query: 306 DRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKRIKCLNCYQYWE 359
+ + GG ++ ++ C + + +D+ + + C C W+
Sbjct: 201 EHQMARTGGTQTDLFTCSKCKKKNCTYTQVQTRSSDEPMTT-YVVCNECGNRWK 253
>gi|119615455|gb|EAW95049.1| transcription elongation factor A (SII), 3, isoform CRA_b [Homo
sapiens]
Length = 396
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 87/201 (43%), Gaps = 24/201 (11%)
Query: 173 PASAVVPQKLVSMI---KC---NDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIR 226
P+S + P SM C D R++ E L AL + D++ +D CD +
Sbjct: 162 PSSPLTPTFASSMCLLAPCYLTGDSVRDKCVEMLSAAL-----KADDDYKDYGVNCD--K 214
Query: 227 VAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEE 286
+A E ++++ + Y + RS + NL DP NP RR VL G + + KM++EE
Sbjct: 215 MASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEE 274
Query: 287 MVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSA 346
M SD R L + +E + + GG ++ C +C KK + Q SA
Sbjct: 275 MASDELRELRNAMTQEAIREHQMAKTGGTTTDLFQ-----CSKC-KKKNCTYNQVQTRSA 328
Query: 347 KR-----IKCLNCYQYWESTT 362
+ C C W+ ++
Sbjct: 329 DEPMTTFVLCNECGNRWKVSS 349
>gi|260797171|ref|XP_002593577.1| hypothetical protein BRAFLDRAFT_88149 [Branchiostoma floridae]
gi|229278803|gb|EEN49588.1| hypothetical protein BRAFLDRAFT_88149 [Branchiostoma floridae]
Length = 588
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 64/139 (46%), Gaps = 11/139 (7%)
Query: 231 AESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSD 290
A +L +++ ++ Y+ + RS + NL D +NP R KVL G V E + KM++EEM S
Sbjct: 372 ANALKTDEFKNTEMKYKTRVRSRIANLKDAKNPGLREKVLHGDVSAEKMAKMTAEEMASP 431
Query: 291 GSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-- 348
+ L Q + KE D + GG + CG+C K+ + Q SA
Sbjct: 432 EMKELRQSLTKEAIRDAQMATTGGTQTDLLK-----CGKC-KKRNVTYNQVQTRSADEPM 485
Query: 349 ---IKCLNCYQYWESTTAL 364
C C W++T L
Sbjct: 486 TTFCYCNECGNRWKATKTL 504
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 59/125 (47%), Gaps = 6/125 (4%)
Query: 231 AESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSD 290
A +L +++ ++ Y+ + RS + NL D +NP R KVL G V E + KM++EEM S
Sbjct: 123 ANALKTDEFKNTEMKYKTRVRSRIANLKDAKNPGLREKVLHGDVSAEKMAKMTAEEMASP 182
Query: 291 GSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKRIK 350
+ L Q + KE D + GG + CG+C K+ + Q SA
Sbjct: 183 EMKELRQSLTKEAIRDAQMATTGGTQTDLLK-----CGKC-KKRNVTYNQVQTRSADEPM 236
Query: 351 CLNCY 355
CY
Sbjct: 237 TTFCY 241
>gi|426328285|ref|XP_004024930.1| PREDICTED: transcription elongation factor A protein 3 [Gorilla
gorilla gorilla]
Length = 327
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 85/198 (42%), Gaps = 24/198 (12%)
Query: 173 PASAVVPQKLVSMI---KC---NDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIR 226
P+S + P SM C D R++ E L AL + D++ +D CD +
Sbjct: 141 PSSPLTPTFASSMCLLAPCYLTGDSVRDKCVEMLSAAL-----KADDDYKDYGVNCD--K 193
Query: 227 VAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEE 286
+A E ++++ + Y + RS + NL DP NP RR VL G + + KM++EE
Sbjct: 194 MASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEE 253
Query: 287 MVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSA 346
M SD R L + +E + + GG ++ C +C KK + Q SA
Sbjct: 254 MASDELRELRNAMTQEAIREHQMAKTGGTTTDLFQ-----CSKC-KKKNCTYNQVQTRSA 307
Query: 347 KR-----IKCLNCYQYWE 359
+ C C W+
Sbjct: 308 DEPMTTFVLCNECGNRWK 325
>gi|3288459|emb|CAA11393.1| transcription elongation factor TFIIS.h [Homo sapiens]
Length = 320
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 85/198 (42%), Gaps = 24/198 (12%)
Query: 173 PASAVVPQKLVSMI---KC---NDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIR 226
P+S + P SM C D R++ E L AL + D++ +D CD +
Sbjct: 134 PSSPLTPTFASSMCLLAPCYLTGDSVRDKCVEMLSAAL-----KADDDYKDYGVNCD--K 186
Query: 227 VAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEE 286
+A E ++++ + Y + RS + NL DP NP RR VL G + + KM++EE
Sbjct: 187 MASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEE 246
Query: 287 MVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSA 346
M SD R L + +E + + GG ++ C +C KK + Q SA
Sbjct: 247 MASDELRELRNAMTQEAIREHQMAKTGGTTTDLFQ-----CSKC-KKKNCTYNQVQTRSA 300
Query: 347 KR-----IKCLNCYQYWE 359
+ C C W+
Sbjct: 301 DEPMTTFVLCNECGNRWK 318
>gi|209876019|ref|XP_002139452.1| transcription factor S-II domain-containing protein
[Cryptosporidium muris RN66]
gi|209555058|gb|EEA05103.1| transcription factor S-II domain-containing protein
[Cryptosporidium muris RN66]
Length = 322
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 85/177 (48%), Gaps = 15/177 (8%)
Query: 192 FRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKW----GHSFGTYE 247
R++ R+ L+KA E+ D C+ ++ ES +++++ G+S Y
Sbjct: 151 LRDKARQFLWKAFVMGVPVSQAELMDPSQVCE---ISAEVESALYKEYIIKQGNSVRDYN 207
Query: 248 VKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDR 307
++ ++I +NL D +NP+ K+ +G + P+ + M S EM S+ ++ ++ K+E
Sbjct: 208 LQLKTIKWNLGDLKNPELNSKLYIGKITPDEIATMHSREMASEAKQKEREKHKQESLEAC 267
Query: 308 YLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
W L + ++ CG+C KTT + Q SA ++CLNC W+
Sbjct: 268 QSDWDLRNL--VQKEGQFTCGKCRTNKTT-YFQMQTRSADEPMTTFVRCLNCGNRWK 321
>gi|403287385|ref|XP_003934929.1| PREDICTED: transcription elongation factor A protein 3 [Saimiri
boliviensis boliviensis]
Length = 348
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 85/198 (42%), Gaps = 24/198 (12%)
Query: 173 PASAVVP---QKLVSMIKC---NDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIR 226
P+S + P + + C D R++ E L AL + D++ +D CD +
Sbjct: 162 PSSPLTPTFASSICLLAPCYLTGDSVRDKCVEMLSAAL-----KADDDYKDYGVNCD--K 214
Query: 227 VAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEE 286
+A E ++++ + Y + RS + NL DP NP RR VL G + + KM++EE
Sbjct: 215 MASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEE 274
Query: 287 MVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSA 346
M SD R L + +E + + GG ++ C +C KK + Q SA
Sbjct: 275 MASDELRELRNAMTQEAIREHQMAKTGGTTTDLFQ-----CSKC-KKKNCTYNQVQTRSA 328
Query: 347 KR-----IKCLNCYQYWE 359
+ C C W+
Sbjct: 329 DEPMTTFVLCNECGNRWK 346
>gi|154288118|ref|XP_001544854.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150408495|gb|EDN04036.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 378
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 67/141 (47%), Gaps = 11/141 (7%)
Query: 219 LNGCDPIRV----AITAESLMFEKWG-HSFGTYEVKYRSILFNLMDPENPDFRRKVLLGH 273
L+ +P RV AI ES + +G + Y K RS+ NL + NPD R +VL
Sbjct: 227 LHSTEPPRVVLQKAIQVESAAYNAFGPETKEQYRTKMRSLFQNLKNKSNPDLRVRVLSNE 286
Query: 274 VKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHK 333
+ P+ ++M+ +E+ SD R ++I KE D+ + K ST CG+CG K
Sbjct: 287 ITPDKFVRMTHDELKSDAQREEERRIHKENM-DKAMVAKAER----SISTSLQCGKCGQK 341
Query: 334 KTTNHGNDQNSSAKRIKCLNC 354
K T + Q SA L C
Sbjct: 342 KVT-YTEAQTRSADEPMTLFC 361
>gi|354485610|ref|XP_003504976.1| PREDICTED: transcription elongation factor A protein 3-like
[Cricetulus griseus]
Length = 362
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 78/182 (42%), Gaps = 18/182 (9%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVK 249
D R++ E L AL + +++ +D CD ++A E ++++ + Y +
Sbjct: 194 DSVRDKCVEMLSAAL-----KAEDDFKDYGVNCD--KLASEIEDHIYQELKSTDMKYRNR 246
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYL 309
RS + NL DP NP RR VL G + P + KM++EEM SD R L + +E + +
Sbjct: 247 VRSRISNLKDPRNPGLRRNVLSGAISPGLIAKMTAEEMASDELRELRNAMTQEAIREHQM 306
Query: 310 PWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWESTTAL 364
GG + C +C KK + Q SA + C C W+
Sbjct: 307 AKTGGTTTDLLR-----CSKC-KKKNCTYNQVQTRSADEPMTTFVLCNECGNRWKEKKGK 360
Query: 365 YG 366
G
Sbjct: 361 VG 362
>gi|126303929|ref|XP_001375747.1| PREDICTED: transcription elongation factor A protein 1-like isoform
1 [Monodelphis domestica]
Length = 301
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 69/144 (47%), Gaps = 11/144 (7%)
Query: 221 GCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALI 280
G D + E ++++ ++ Y+ + RS + NL D +NP+ R+ VL G++ P+
Sbjct: 162 GADEEELGSQIEEAIYQELRNTDMKYKNRVRSRIANLKDAKNPNLRKNVLCGNIPPDLFA 221
Query: 281 KMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGN 340
+M++EEM SD + +++ + KE + + GG + + CG+C KK +
Sbjct: 222 RMTAEEMASDELKEMHKNLTKEAIREHQMAKTGG-----TQTDLFTCGKC-KKKNCTYTQ 275
Query: 341 DQNSSAKR-----IKCLNCYQYWE 359
Q SA + C C W+
Sbjct: 276 VQTRSADEPMTTFVVCNECGNRWK 299
>gi|431891774|gb|ELK02308.1| Transcription elongation factor A protein 1 [Pteropus alecto]
Length = 325
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 11/129 (8%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
Y+ + RS + NL D +NP+ R+ VL G++ P+ +M++EEM SD + + + + KE
Sbjct: 185 YKNRVRSRISNLKDAKNPNLRKNVLCGNISPDLFARMTAEEMASDELKEMRKNLTKEAIR 244
Query: 306 DRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWES 360
+ + GG + + CG+C KK + Q SA + C C W++
Sbjct: 245 EHQMAKTGG-----TQTDLFTCGKC-KKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKT 298
Query: 361 TTALYGLLP 369
T + P
Sbjct: 299 GTIKSEIKP 307
>gi|358367754|dbj|GAA84372.1| transcription elongation factor S-II [Aspergillus kawachii IFO
4308]
Length = 303
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 70/151 (46%), Gaps = 16/151 (10%)
Query: 219 LNGCDPIRVAIT----AESLMFEKWG-HSFGTYEVKYRSILFNLMDPENPDFRRKVLLGH 273
LN +P R ++ E+ F G + Y K RS+ NL + NP R +VL G
Sbjct: 158 LNSVEPPRTVLSKASAVEAAAFSDLGPETKEQYRTKIRSLYQNLKNKSNPSLRVRVLNGD 217
Query: 274 VKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHK 333
V PE ++MS +E+ S+ + +++I+KE + + ST CG+CG +
Sbjct: 218 VTPERFVRMSHDELRSEEQQERDRRIQKENMDKAMVAQAERSI-----STSLQCGKCGQR 272
Query: 334 KTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
K T + Q SA C+NC + W+
Sbjct: 273 KVT-YTEAQTRSADEPMTLFCTCMNCGKSWK 302
>gi|355557658|gb|EHH14438.1| hypothetical protein EGK_00364, partial [Macaca mulatta]
Length = 348
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 85/198 (42%), Gaps = 24/198 (12%)
Query: 173 PASAVVP---QKLVSMIKC---NDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIR 226
P+S + P + + C D R++ E L AL + D++ +D CD +
Sbjct: 162 PSSPLTPTFASSICLLAPCYLTGDSVRDKCVEMLSAAL-----KADDDYKDYGVNCD--K 214
Query: 227 VAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEE 286
+A E ++++ + Y + RS + NL DP NP RR VL G + + KM++EE
Sbjct: 215 MASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEE 274
Query: 287 MVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSA 346
M SD R L + +E + + GG ++ C +C KK + Q SA
Sbjct: 275 MASDELRELRNAMTQEAIREHQMAKTGGTTTDLFQ-----CSKC-KKKNCTYNQVQTRSA 328
Query: 347 KR-----IKCLNCYQYWE 359
+ C C W+
Sbjct: 329 DEPMTTFVLCNECGNRWK 346
>gi|169602463|ref|XP_001794653.1| hypothetical protein SNOG_04233 [Phaeosphaeria nodorum SN15]
gi|111066873|gb|EAT87993.1| hypothetical protein SNOG_04233 [Phaeosphaeria nodorum SN15]
Length = 301
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 67/142 (47%), Gaps = 11/142 (7%)
Query: 223 DPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKM 282
D I VA E+ + G Y+ K RS+ NL + NP R+ VL G ++P+ + M
Sbjct: 164 DIITVAKHVEAAAYGNAGSVNDAYKQKMRSLFQNLKNKSNPALRKDVLSGKIQPKKFVVM 223
Query: 283 SSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQ 342
S +EM SD R +++++KE + + + S + CG+C KK ++ Q
Sbjct: 224 SHDEMKSDSRRAEDEKLEKENMNQAMVAQVEKSI-----SKEFQCGKC-KKKMVSYSQAQ 277
Query: 343 NSSAKR-----IKCLNCYQYWE 359
SA +C+NC W+
Sbjct: 278 TRSADEPMTTFCECMNCGNRWK 299
>gi|168012823|ref|XP_001759101.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689800|gb|EDQ76170.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 90
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Query: 251 RSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYLP 310
RSI+FN+ D N DFRR++LLG +KPEA++ M+ +M S+ ++ + IK + + L
Sbjct: 1 RSIMFNVKDDTNLDFRRRILLGRIKPEAVVSMTFSDMASEQRKKETEGIKAKSMFECELG 60
Query: 311 WKGGYLGPIYHSTRYMCGRCGHKKTT 336
+ + ++ CG+C +KTT
Sbjct: 61 ATA-----VASTDQFKCGKCLQRKTT 81
>gi|334325647|ref|XP_003340666.1| PREDICTED: transcription elongation factor A protein 1-like
[Monodelphis domestica]
Length = 301
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 11/144 (7%)
Query: 221 GCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALI 280
G D + E ++++ ++ Y+ + RS + NL D +NP+ R+ VL G++ P+
Sbjct: 162 GADEEELGSQIEEAIYQELRNTDMKYKNRVRSRIANLKDAKNPNLRKNVLCGNIPPDLFA 221
Query: 281 KMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGN 340
+M++EEM SD + + + + KE + + GG + + CG+C KK +
Sbjct: 222 RMTAEEMASDELKEMRKNLTKEAIREHQMAKTGG-----TQTDLFTCGKC-KKKNCTYTQ 275
Query: 341 DQNSSAKR-----IKCLNCYQYWE 359
Q SA + C C W+
Sbjct: 276 VQTRSADEPMTTFVVCNECGNRWK 299
>gi|71000299|ref|XP_754844.1| transcription elongation factor S-II [Aspergillus fumigatus Af293]
gi|66852481|gb|EAL92806.1| transcription elongation factor S-II [Aspergillus fumigatus Af293]
gi|159127856|gb|EDP52971.1| transcription elongation factor S-II [Aspergillus fumigatus A1163]
Length = 304
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 66/150 (44%), Gaps = 16/150 (10%)
Query: 219 LNGCDPIRVAITAESLMFEKWGHSFGT-----YEVKYRSILFNLMDPENPDFRRKVLLGH 273
LN + R ++ S + ++ G Y K RS+ NL + NP R +VL
Sbjct: 159 LNSTESPRAVLSKASAVEAAAFNALGPETKEQYRTKIRSLYQNLKNKSNPTLRVRVLSNE 218
Query: 274 VKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHK 333
V PE +KMS +E+ SD R ++I+KE + + ST CG+CG +
Sbjct: 219 VTPEQFVKMSHDELKSDEQREQERRIQKENMDKAMVAQAERSI-----STSLQCGKCGQR 273
Query: 334 KTTNHGNDQNSSAKR-----IKCLNCYQYW 358
K T + Q SA C+NC + W
Sbjct: 274 KVT-YTEAQTRSADEPMTLFCTCMNCGKSW 302
>gi|114620133|ref|XP_528135.2| PREDICTED: transcription elongation factor A protein 1 isoform 5
[Pan troglodytes]
gi|397505489|ref|XP_003823293.1| PREDICTED: transcription elongation factor A protein 1 isoform 1
[Pan paniscus]
gi|410212656|gb|JAA03547.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
gi|410251522|gb|JAA13728.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
gi|410298812|gb|JAA28006.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
gi|410341539|gb|JAA39716.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
Length = 301
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 11/144 (7%)
Query: 221 GCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALI 280
G D + E ++++ ++ Y+ + RS + NL D +NP+ R+ VL G++ P+
Sbjct: 162 GADEEELGSQIEEAIYQEMRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFA 221
Query: 281 KMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGN 340
+M++EEM SD + + + + KE + + GG + + CG+C KK +
Sbjct: 222 RMTAEEMASDELKEMRKNLTKEAIREHQMAKTGG-----TQTDLFTCGKC-KKKNCTYTQ 275
Query: 341 DQNSSAKR-----IKCLNCYQYWE 359
Q SA + C C W+
Sbjct: 276 VQTRSADEPMTTFVVCNECGNRWK 299
>gi|384941052|gb|AFI34131.1| transcription elongation factor A protein 3 [Macaca mulatta]
gi|387540828|gb|AFJ71041.1| transcription elongation factor A protein 3 [Macaca mulatta]
Length = 348
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 85/198 (42%), Gaps = 24/198 (12%)
Query: 173 PASAVVP---QKLVSMIKC---NDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIR 226
P+S + P + + C D R++ E L AL + D++ +D CD +
Sbjct: 162 PSSPLTPTFASSICLLAPCYLTGDSVRDKCVEMLSAAL-----KADDDYKDYGVNCD--K 214
Query: 227 VAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEE 286
+A E ++++ + Y + RS + NL DP NP RR VL G + + KM++EE
Sbjct: 215 MASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEE 274
Query: 287 MVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSA 346
M SD R L + +E + + GG ++ C +C KK + Q SA
Sbjct: 275 MASDELRELRNAMTQEAIREHQMAKTGGTTTDLFQ-----CSKC-KKKNCTYNQVQTRSA 328
Query: 347 KR-----IKCLNCYQYWE 359
+ C C W+
Sbjct: 329 DEPMTTFVLCNECGNRWK 346
>gi|213624443|gb|AAI71109.1| transcription elongation factor A (SII), 3 [Xenopus (Silurana)
tropicalis]
gi|213627306|gb|AAI71083.1| transcription elongation factor A (SII), 3 [Xenopus (Silurana)
tropicalis]
Length = 292
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 84/196 (42%), Gaps = 20/196 (10%)
Query: 171 EKPASAVVPQ--KLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVA 228
E P + + P+ + + +D R + RE L AL V G D +A
Sbjct: 108 EVPKTPITPKMTRFPPLPVTSDSVRTKCREMLRAALQTDGDHV-------AIGADCEFLA 160
Query: 229 ITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMV 288
E ++F + ++ Y+ + RS + NL D +NPD R+ VL G + PE + MS EEM
Sbjct: 161 AQIEEVVFGEMQNTDMKYKNRIRSRISNLKDSKNPDLRKNVLCGVIGPEQIAVMSCEEMA 220
Query: 289 SDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR 348
S+ + + + + K + + GG + + CG+C KK + Q SA
Sbjct: 221 SNELKEMRKAMTKAAIQEHQMAKTGG-----TQTDLFTCGKC-KKKNCTYTQVQIRSADE 274
Query: 349 -----IKCLNCYQYWE 359
+ C C W+
Sbjct: 275 PMTTFVACNECGNRWK 290
>gi|114052232|ref|NP_001039825.1| transcription elongation factor A protein 3 [Bos taurus]
gi|122135940|sp|Q2KI09.1|TCEA3_BOVIN RecName: Full=Transcription elongation factor A protein 3; AltName:
Full=Transcription elongation factor S-II protein 3
gi|86438556|gb|AAI12813.1| Transcription elongation factor A (SII), 3 [Bos taurus]
gi|296490011|tpg|DAA32124.1| TPA: transcription elongation factor A protein 3 [Bos taurus]
Length = 349
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 77/175 (44%), Gaps = 18/175 (10%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVK 249
D R++ E L AL + D++ +D CD ++A E ++++ + Y +
Sbjct: 186 DSVRDKCVEMLSAAL-----KADDDYKDYGVNCD--KMASEIEDHIYQELKSTDMKYRNR 238
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYL 309
RS + NL DP NP RR VL G + + KM++EEM SD R L + +E + +
Sbjct: 239 VRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDELRELRNAMTQEAIREHQM 298
Query: 310 PWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
GG ++ C +C KK + Q SA + C C W+
Sbjct: 299 AKTGGTTTDLFQ-----CSKC-KKKNCTYNQVQTRSADEPMTTFVLCNECGNRWK 347
>gi|91834|pir||PS0180 transcription elongation factor S-II-related protein L122, hepatic
- mouse (fragment)
Length = 289
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 77/175 (44%), Gaps = 18/175 (10%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVK 249
D R++ E L AL + ++ +D CD ++A E ++++ + Y +
Sbjct: 126 DSVRDKCVEMLSAAL-----KAEDNFKDYGVNCD--KLASEIEDHIYQELKSTDMKYRNR 178
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYL 309
RS + NL DP NP RR VL G + PE + KM++EEM SD R L + +E + +
Sbjct: 179 VRSRISNLKDPRNPGLRRNVLSGAISPELIAKMTAEEMASDELRELRNAMTQEAIREHQM 238
Query: 310 PWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
GG + C +C KK + Q SA + C C W+
Sbjct: 239 AKTGGTTTDLLR-----CSKC-KKKNCTYNQVQTRSADEPMTTFVLCNECGNRWK 287
>gi|126342555|ref|XP_001362914.1| PREDICTED: transcription elongation factor A protein 1-like isoform
1 [Monodelphis domestica]
Length = 301
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 11/144 (7%)
Query: 221 GCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALI 280
G D + E ++++ ++ Y+ + RS + NL D +NP+ R+ VL G++ P+
Sbjct: 162 GADEEELGSQIEEAIYQELRNTDMKYKNRVRSRIANLKDAKNPNLRKNVLCGNIPPDLFA 221
Query: 281 KMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGN 340
+M++EEM SD + + + + KE + + GG + + CG+C KK +
Sbjct: 222 RMTAEEMASDELKEIRKNLTKEAIREHQMAKTGG-----TQTDLFTCGKC-KKKNCTYTQ 275
Query: 341 DQNSSAKR-----IKCLNCYQYWE 359
Q SA + C C W+
Sbjct: 276 VQTRSADEPMTTFVVCNECGNRWK 299
>gi|62858793|ref|NP_001016290.1| transcription elongation factor A (SII), 3 [Xenopus (Silurana)
tropicalis]
gi|89266837|emb|CAJ83973.1| transcription elongation factor A (SII), 2 [Xenopus (Silurana)
tropicalis]
Length = 292
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 84/196 (42%), Gaps = 20/196 (10%)
Query: 171 EKPASAVVPQ--KLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVA 228
E P + + P+ + + +D R + RE L AL V G D +A
Sbjct: 108 EVPKAPITPKMTRFPPLPVTSDSVRTKCREMLRAALQTDGDHV-------AIGADCEFLA 160
Query: 229 ITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMV 288
E ++F + ++ Y+ + RS + NL D +NPD R+ VL G + PE + MS EEM
Sbjct: 161 AQIEEVVFGEMQNTDMKYKNRIRSRISNLKDSKNPDLRKNVLCGVIGPEQIAVMSCEEMA 220
Query: 289 SDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR 348
S+ + + + + K + + GG + + CG+C KK + Q SA
Sbjct: 221 SNELKEMRKAMTKAAIQEHQMAKTGG-----TQTDLFTCGKC-KKKNCTYTQVQIRSADE 274
Query: 349 -----IKCLNCYQYWE 359
+ C C W+
Sbjct: 275 PMTTFVACNECGNRWK 290
>gi|126303931|ref|XP_001375763.1| PREDICTED: transcription elongation factor A protein 1-like isoform
2 [Monodelphis domestica]
Length = 280
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 69/144 (47%), Gaps = 11/144 (7%)
Query: 221 GCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALI 280
G D + E ++++ ++ Y+ + RS + NL D +NP+ R+ VL G++ P+
Sbjct: 141 GADEEELGSQIEEAIYQELRNTDMKYKNRVRSRIANLKDAKNPNLRKNVLCGNIPPDLFA 200
Query: 281 KMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGN 340
+M++EEM SD + +++ + KE + + GG + + CG+C KK +
Sbjct: 201 RMTAEEMASDELKEMHKNLTKEAIREHQMAKTGG-----TQTDLFTCGKC-KKKNCTYTQ 254
Query: 341 DQNSSAKR-----IKCLNCYQYWE 359
Q SA + C C W+
Sbjct: 255 VQTRSADEPMTTFVVCNECGNRWK 278
>gi|301111450|ref|XP_002904804.1| transcription elongation factor, putative [Phytophthora infestans
T30-4]
gi|262095134|gb|EEY53186.1| transcription elongation factor, putative [Phytophthora infestans
T30-4]
Length = 307
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 130/351 (37%), Gaps = 83/351 (23%)
Query: 27 EEAQCIAALDQLHKSSITCQLLVSTQLVRHLLPLTKHPRQKIQDTASELILSWRSLFLEQ 86
++ + + L L K+++T +L T++ + L KH +KI A L+ SW+++ L
Sbjct: 21 DQVEALEVLRGLEKTTVTYAILKETKMGHTVGKLRKHENEKIASLARLLVKSWKNMALSP 80
Query: 87 MKGDEENGSFAICGEIKSANVEIAKGKRQITSDEFEQALDVEVVKVRRVDQKGAPRSKKL 146
R + SD +A V K
Sbjct: 81 ---------------------------RPLVSDPERKASSSGNSNKTEVSSK-------- 105
Query: 147 VGSEFIVTEETNSLDNVDAEAIREEKPASA-VVPQKLVSMIKCNDYFRERIREKLYKALS 205
VT +N L A +P+SA +P L D R +R KL
Sbjct: 106 ------VTSGSNGLKTAPKPA--GARPSSAPFIPAGL-------DKVRATVRTKL----- 145
Query: 206 KVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKW-----GHSFGTYEVKYRSILFNLMDP 260
+E+ + G +P VA E M + G Y KYR + FNL
Sbjct: 146 -------KEILEASEGGNPGEVAAAIEVAMARIYHMGAPGEQKKDYMAKYRQLSFNL--K 196
Query: 261 ENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIY 320
+N D R+ +L V + LIKMS+EE+ ++ R ++++ + + L W I
Sbjct: 197 KNGDLRQNLLDDSVSGDQLIKMSAEELATEEKRAQIEKLRDDAFQEARLDWAEANHEKIQ 256
Query: 321 HSTR-------YMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
T + CGRC KT+N Q SA + C NC W+
Sbjct: 257 KQTGTEGTKGLFTCGRCKSSKTSNT-QKQTRSADEPMTVFVMCHNCGNRWK 306
>gi|345306840|ref|XP_001514566.2| PREDICTED: transcription elongation factor A protein 1-like
[Ornithorhynchus anatinus]
Length = 291
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 80/180 (44%), Gaps = 28/180 (15%)
Query: 190 DYFRERIREKLYKALSK-----VSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFG 244
D R + RE L AL G DEE+ ++ E ++++ ++
Sbjct: 128 DSVRVKCREMLAAALKTGDDYIAIGADDEELGSQI------------EEAIYQELRNTDM 175
Query: 245 TYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERA 304
Y+ + RS + NL D +NP+ R+ VL G++ P+ +M++EEM SD + + + + KE
Sbjct: 176 KYKNRVRSRIANLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAI 235
Query: 305 SDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
+ + GG + + CG+C KK + Q SA + C C W+
Sbjct: 236 REHQMAKTGG-----TQTDLFTCGKC-KKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 289
>gi|225560163|gb|EEH08445.1| transcription elongation factor S-II [Ajellomyces capsulatus
G186AR]
Length = 306
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 69/150 (46%), Gaps = 16/150 (10%)
Query: 219 LNGCDPIRV----AITAESLMFEKWG-HSFGTYEVKYRSILFNLMDPENPDFRRKVLLGH 273
L+ +P RV AI E + +G + Y K RS+ NL + NPD R +VL
Sbjct: 161 LHSTEPPRVVLQKAIQVELAAYNAFGPETKEQYRTKMRSLFQNLKNKSNPDLRVRVLSNE 220
Query: 274 VKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHK 333
+ P+ ++M+ +E+ SD R ++I KE D+ + K ST CG+CG K
Sbjct: 221 ITPDKFVRMTHDELKSDAQREEERRIHKENM-DKAMVAKAER----SISTSLQCGKCGQK 275
Query: 334 KTTNHGNDQNSSAKR-----IKCLNCYQYW 358
K T + Q SA C+ C + W
Sbjct: 276 KVT-YTEAQTRSADEPMTLFCTCVVCGKSW 304
>gi|114052218|ref|NP_001039390.1| transcription elongation factor A protein 1 [Bos taurus]
gi|122135281|sp|Q29RL9.1|TCEA1_BOVIN RecName: Full=Transcription elongation factor A protein 1; AltName:
Full=Transcription elongation factor S-II protein 1
gi|88954354|gb|AAI14118.1| Transcription elongation factor A (SII), 1 [Bos taurus]
Length = 301
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 11/144 (7%)
Query: 221 GCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALI 280
G D + E ++++ ++ Y+ + RS + NL D +NP+ R+ VL G++ P+
Sbjct: 162 GADEEELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFA 221
Query: 281 KMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGN 340
+M++EEM SD + + + + KE + + GG + + CG+C KK +
Sbjct: 222 RMTAEEMASDELKEMRKNLTKEAIREHQMAKTGG-----TQTDLFTCGKC-KKKNCTYTQ 275
Query: 341 DQNSSAKR-----IKCLNCYQYWE 359
Q SA + C C W+
Sbjct: 276 VQTRSADEPMTTFVVCNECGNRWK 299
>gi|417398602|gb|JAA46334.1| Putative transcription elongation factor a protein 1 [Desmodus
rotundus]
Length = 301
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 11/144 (7%)
Query: 221 GCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALI 280
G D + E ++++ ++ Y+ + RS + NL D +NP+ R+ VL G++ P+
Sbjct: 162 GADEEELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFA 221
Query: 281 KMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGN 340
+M++EEM SD + + + + KE + + GG + + CG+C KK +
Sbjct: 222 RMTAEEMASDELKEMRKNLTKEAIREHQMAKTGG-----TQTDLFTCGKC-KKKNCTYTQ 275
Query: 341 DQNSSAKR-----IKCLNCYQYWE 359
Q SA + C C W+
Sbjct: 276 VQTRSADEPMTTFVVCNECGNRWK 299
>gi|355697956|gb|EHH28504.1| hypothetical protein EGK_18954, partial [Macaca mulatta]
gi|355779691|gb|EHH64167.1| hypothetical protein EGM_17319, partial [Macaca fascicularis]
Length = 300
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 11/144 (7%)
Query: 221 GCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALI 280
G D + E ++++ ++ Y+ + RS + NL D +NP+ R+ VL G++ P+
Sbjct: 162 GADEEELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFA 221
Query: 281 KMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGN 340
+M++EEM SD + + + + KE + + GG + + CG+C KK +
Sbjct: 222 RMTAEEMASDELKEMRKNLTKEAIREHQMAKTGG-----TQTDLFTCGKC-KKKNCTYTQ 275
Query: 341 DQNSSAKR-----IKCLNCYQYWE 359
Q SA + C C W+
Sbjct: 276 VQTRSADEPMTTFVVCNECGNRWK 299
>gi|240278909|gb|EER42415.1| transcription elongation factor S-II [Ajellomyces capsulatus H143]
gi|325090170|gb|EGC43480.1| transcription elongation factor S-II [Ajellomyces capsulatus H88]
Length = 306
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 69/150 (46%), Gaps = 16/150 (10%)
Query: 219 LNGCDPIRV----AITAESLMFEKWG-HSFGTYEVKYRSILFNLMDPENPDFRRKVLLGH 273
L+ +P RV AI E + +G + Y K RS+ NL + NPD R +VL
Sbjct: 161 LHSTEPPRVVLQKAIQVELAAYNAFGPETKEQYRTKMRSLFQNLKNKSNPDLRVRVLSNE 220
Query: 274 VKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHK 333
+ P+ ++M+ +E+ SD R ++I KE D+ + K ST CG+CG K
Sbjct: 221 ITPDKFVRMTHDELKSDAQREEERRIHKENM-DKAMVAKAER----SISTSLQCGKCGQK 275
Query: 334 KTTNHGNDQNSSAKR-----IKCLNCYQYW 358
K T + Q SA C+ C + W
Sbjct: 276 KVT-YTEAQTRSADEPMTLFCTCVVCGKSW 304
>gi|229094709|ref|NP_001153222.1| transcription elongation factor A protein 1 isoform 3 [Mus
musculus]
Length = 300
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 11/144 (7%)
Query: 221 GCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALI 280
G D + E ++++ ++ Y+ + RS + NL D +NP+ R+ VL G++ P+
Sbjct: 161 GADEEELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFA 220
Query: 281 KMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGN 340
+M++EEM SD + + + + KE + + GG + + CG+C KK +
Sbjct: 221 RMTAEEMASDELKEMRKNLTKEAIREHQMAKTGG-----TQTDLFTCGKC-KKKNCTYTQ 274
Query: 341 DQNSSAKR-----IKCLNCYQYWE 359
Q SA + C C W+
Sbjct: 275 VQTRSADEPMTTFVVCNECGNRWK 298
>gi|224007775|ref|XP_002292847.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220971709|gb|EED90043.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 394
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 64/129 (49%), Gaps = 16/129 (12%)
Query: 245 TYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERA 304
TY K R+++FNL +N R +V+LG V PE L+KM+SEE+ +D + + K
Sbjct: 267 TYNEKVRTLVFNLK--KNGPLRDRVILGQVTPERLVKMTSEELQTDEKAKAIEDTVKSLQ 324
Query: 305 SDRYLPWKG----------GYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKRIK---- 350
R L W G G + +++ + CGRC KTT+ S+ + +
Sbjct: 325 ESRRLDWDQANEDKINDMCGIKGDLKNASLFTCGRCKSTKTTSTQKQTRSADEPMTVFVL 384
Query: 351 CLNCYQYWE 359
CLNC + W+
Sbjct: 385 CLNCGKRWK 393
>gi|301788390|ref|XP_002929610.1| PREDICTED: transcription elongation factor A protein 1-like
[Ailuropoda melanoleuca]
Length = 301
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 11/144 (7%)
Query: 221 GCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALI 280
G D + E ++++ ++ Y+ + RS + NL D +NP+ R+ VL G++ P+
Sbjct: 162 GADEEELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFA 221
Query: 281 KMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGN 340
+M++EEM SD + + + + KE + + GG + + CG+C KK +
Sbjct: 222 RMTAEEMASDELKEMRKNLTKEAIREHQMAKTGG-----TQTDLFTCGKC-KKKNCTYTQ 275
Query: 341 DQNSSAKR-----IKCLNCYQYWE 359
Q SA + C C W+
Sbjct: 276 VQTRSADEPMTTFVVCNECGNRWK 299
>gi|60829875|gb|AAX36898.1| transcription elongation factor A 1 [synthetic construct]
Length = 302
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 11/144 (7%)
Query: 221 GCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALI 280
G D + E ++++ ++ Y+ + RS + NL D +NP+ R+ VL G++ P+
Sbjct: 162 GADEEELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFA 221
Query: 281 KMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGN 340
+M++EEM SD + + + + KE + + GG + + CG+C KK +
Sbjct: 222 RMTAEEMASDELKEMRKNLTKEAIREHQMAKTGG-----TQTDLFTCGKC-KKKNCTYTQ 275
Query: 341 DQNSSAKR-----IKCLNCYQYWE 359
Q SA + C C W+
Sbjct: 276 VQTRSADEPMTTFVVCNECGNRWK 299
>gi|395841852|ref|XP_003793744.1| PREDICTED: transcription elongation factor A protein 1 isoform 1
[Otolemur garnettii]
Length = 301
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 11/144 (7%)
Query: 221 GCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALI 280
G D + E ++++ ++ Y+ + RS + NL D +NP+ R+ VL G++ P+
Sbjct: 162 GADEEELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFA 221
Query: 281 KMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGN 340
+M++EEM SD + + + + KE + + GG + + CG+C KK +
Sbjct: 222 RMTAEEMASDELKEMRKNLTKEAIREHQMAKTGG-----TQTDLFTCGKC-KKKNCTYTQ 275
Query: 341 DQNSSAKR-----IKCLNCYQYWE 359
Q SA + C C W+
Sbjct: 276 VQTRSADEPMTTFVVCNECGNRWK 299
>gi|61365803|gb|AAX42766.1| transcription elongation factor A 1 [synthetic construct]
Length = 302
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 11/144 (7%)
Query: 221 GCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALI 280
G D + E ++++ ++ Y+ + RS + NL D +NP+ R+ VL G++ P+
Sbjct: 162 GADEEELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFA 221
Query: 281 KMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGN 340
+M++EEM SD + + + + KE + + GG + + CG+C KK +
Sbjct: 222 RMTAEEMASDELKEMRKNLTKEAIREHQMAKTGG-----TQTDLFTCGKC-KKKNCTYTQ 275
Query: 341 DQNSSAKR-----IKCLNCYQYWE 359
Q SA + C C W+
Sbjct: 276 VQTRSADEPMTTFVVCNECGNRWK 299
>gi|156541048|ref|XP_001600804.1| PREDICTED: transcription elongation factor S-II-like [Nasonia
vitripennis]
Length = 312
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 79/176 (44%), Gaps = 20/176 (11%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGC-DPIRVAITAESLMFEKWGHSFGTYEV 248
D R + RE L AL +V G ++GC P +A E +F ++ ++ Y
Sbjct: 149 DAVRLKCRELLASAL-QVEGNT-------IDGCASPEELAEELEEAIFGEFKNTDNKYRN 200
Query: 249 KYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRY 308
+ RS + NL D +NP R ++G + P L M++EEM SD ++L +Q KKE +D
Sbjct: 201 RVRSRVANLRDSKNPTLRTNFIIGAITPGRLATMTAEEMASDEIKQLREQFKKEAINDAQ 260
Query: 309 LPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
L G + CG+C K+ + Q SA + C C W+
Sbjct: 261 LATVQGTKTDLLK-----CGKC-KKRNCTYNQVQTRSADEPMTTFVLCNECGNRWK 310
>gi|17136888|ref|NP_476967.1| RNA polymerase II elongation factor, isoform A [Drosophila
melanogaster]
gi|442627872|ref|NP_001260457.1| RNA polymerase II elongation factor, isoform B [Drosophila
melanogaster]
gi|135660|sp|P20232.1|TFS2_DROME RecName: Full=Transcription elongation factor S-II; AltName:
Full=RNA polymerase II elongation factor DMS-II;
AltName: Full=TFIIS
gi|7921|emb|CAA37710.1| unnamed protein product [Drosophila melanogaster]
gi|6713129|gb|AAA92864.2| transcription elongation factor [Drosophila melanogaster]
gi|7298202|gb|AAF53436.1| RNA polymerase II elongation factor, isoform A [Drosophila
melanogaster]
gi|15291997|gb|AAK93267.1| LD34766p [Drosophila melanogaster]
gi|220942248|gb|ACL83667.1| TfIIS-PA [synthetic construct]
gi|440213800|gb|AGB92992.1| RNA polymerase II elongation factor, isoform B [Drosophila
melanogaster]
Length = 313
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 78/176 (44%), Gaps = 21/176 (11%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGC-DPIRVAITAESLMFEKWGHSFGTYEV 248
D R + RE L AL GEV E GC +P +A E ++ ++ ++ Y+
Sbjct: 151 DAVRIKCREMLATALK--IGEVPE-------GCGEPEEMAAELEDAIYSEFNNTDMKYKN 201
Query: 249 KYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRY 308
+ RS + NL DP+NP R + G V + L KM+ EEM SD ++L ++ KE +D
Sbjct: 202 RIRSRVANLKDPKNPGLRGNFMCGAVTAKQLAKMTPEEMASDEMKKLREKFVKEAINDAQ 261
Query: 309 LPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
L G + C +C K+ + Q SA + C C W+
Sbjct: 262 LATVQGTKTDLLK-----CAKC-KKRNCTYNQLQTRSADEPMTTFVMCNECGNRWK 311
>gi|326931955|ref|XP_003212089.1| PREDICTED: transcription elongation factor A protein 2-like
[Meleagris gallopavo]
Length = 274
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 72/151 (47%), Gaps = 13/151 (8%)
Query: 186 IKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGT 245
I C D R + RE L AL + D++ G D +A E +++ ++
Sbjct: 108 ITC-DAVRNKCREMLTSAL-----QADDDYI--AIGADCEHIAAQIEECIYQDIKNTDMK 159
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
Y+ + RS + NL D +NP+ ++ VL G + PE + M+SEEM S+ + + + + KE
Sbjct: 160 YKNRVRSRISNLKDSKNPELKKNVLCGAITPEQIAVMTSEEMASNELKEIRKAMTKEAIR 219
Query: 306 DRYLPWKGGYLGPIYHSTRYMCGRCGHKKTT 336
+ + GG + + CG+C K T
Sbjct: 220 EHQMAKTGG-----TQTDLFTCGKCKKKNCT 245
>gi|339443|gb|AAA61138.1| transcription elongation factor SII [Homo sapiens]
Length = 301
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 11/144 (7%)
Query: 221 GCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALI 280
G D + E ++++ ++ Y+ + RS + NL D +NP+ R+ VL G++ P+
Sbjct: 162 GADEEELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFA 221
Query: 281 KMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGN 340
+M++EEM SD + + + + KE + + GG + + CG+C KK +
Sbjct: 222 RMTAEEMASDELKEMRKNLTKEAIREHQMAKTGG-----TQTDLFTCGKC-KKKNCTYTQ 275
Query: 341 DQNSSAKR-----IKCLNCYQYWE 359
Q SA + C C W+
Sbjct: 276 VQTRSADEPMTTFVVCNECGNRWK 299
>gi|71043668|ref|NP_001020906.1| transcription elongation factor A protein 1 [Rattus norvegicus]
gi|293353479|ref|XP_002728223.1| PREDICTED: transcription elongation factor A protein 1-like isoform
1 [Rattus norvegicus]
gi|392333220|ref|XP_003752832.1| PREDICTED: transcription elongation factor A protein 1-like [Rattus
norvegicus]
gi|73919859|sp|Q4KLL0.1|TCEA1_RAT RecName: Full=Transcription elongation factor A protein 1; AltName:
Full=Transcription elongation factor S-II protein 1
gi|68533992|gb|AAH99141.1| Transcription elongation factor A (SII) 1 [Rattus norvegicus]
gi|149040017|gb|EDL94101.1| rCG63250 [Rattus norvegicus]
Length = 301
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 11/144 (7%)
Query: 221 GCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALI 280
G D + E ++++ ++ Y+ + RS + NL D +NP+ R+ VL G++ P+
Sbjct: 162 GADEEELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFA 221
Query: 281 KMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGN 340
+M++EEM SD + + + + KE + + GG + + CG+C KK +
Sbjct: 222 RMTAEEMASDELKEMRKNLTKEAIREHQMAKTGG-----TQTDLFTCGKC-KKKNCTYTQ 275
Query: 341 DQNSSAKR-----IKCLNCYQYWE 359
Q SA + C C W+
Sbjct: 276 VQTRSADEPMTTFVVCNECGNRWK 299
>gi|5803191|ref|NP_006747.1| transcription elongation factor A protein 1 isoform 1 [Homo
sapiens]
gi|386781537|ref|NP_001247637.1| transcription elongation factor A protein 1 [Macaca mulatta]
gi|332213781|ref|XP_003256009.1| PREDICTED: transcription elongation factor A protein 1 isoform 1
[Nomascus leucogenys]
gi|426359603|ref|XP_004047057.1| PREDICTED: transcription elongation factor A protein 1 isoform 1
[Gorilla gorilla gorilla]
gi|1174652|sp|P23193.2|TCEA1_HUMAN RecName: Full=Transcription elongation factor A protein 1; AltName:
Full=Transcription elongation factor S-II protein 1;
AltName: Full=Transcription elongation factor TFIIS.o
gi|37074|emb|CAA44470.1| transcription elongation factor [Homo sapiens]
gi|47940496|gb|AAH72460.1| Transcription elongation factor A (SII), 1 [Homo sapiens]
gi|49457436|emb|CAG47017.1| TCEA1 [Homo sapiens]
gi|54696852|gb|AAV38798.1| transcription elongation factor A (SII), 1 [Homo sapiens]
gi|61355862|gb|AAX41184.1| transcription elongation factor A 1 [synthetic construct]
gi|158261931|dbj|BAF83143.1| unnamed protein product [Homo sapiens]
gi|380815988|gb|AFE79868.1| transcription elongation factor A protein 1 isoform 1 [Macaca
mulatta]
gi|383421129|gb|AFH33778.1| transcription elongation factor A protein 1 isoform 1 [Macaca
mulatta]
gi|384942088|gb|AFI34649.1| transcription elongation factor A protein 1 isoform 1 [Macaca
mulatta]
Length = 301
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 11/144 (7%)
Query: 221 GCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALI 280
G D + E ++++ ++ Y+ + RS + NL D +NP+ R+ VL G++ P+
Sbjct: 162 GADEEELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFA 221
Query: 281 KMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGN 340
+M++EEM SD + + + + KE + + GG + + CG+C KK +
Sbjct: 222 RMTAEEMASDELKEMRKNLTKEAIREHQMAKTGG-----TQTDLFTCGKC-KKKNCTYTQ 275
Query: 341 DQNSSAKR-----IKCLNCYQYWE 359
Q SA + C C W+
Sbjct: 276 VQTRSADEPMTTFVVCNECGNRWK 299
>gi|343887420|ref|NP_001230609.1| transcription elongation factor A protein 1 [Sus scrofa]
Length = 300
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 11/144 (7%)
Query: 221 GCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALI 280
G D + E ++++ ++ Y+ + RS + NL D +NP+ R+ VL G++ P+
Sbjct: 161 GADEEELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFA 220
Query: 281 KMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGN 340
+M++EEM SD + + + + KE + + GG + + CG+C KK +
Sbjct: 221 RMTAEEMASDELKEMRKNLTKEAIREHQMAKTGG-----TQTDLFTCGKC-KKKNCTYTQ 274
Query: 341 DQNSSAKR-----IKCLNCYQYWE 359
Q SA + C C W+
Sbjct: 275 VQTRSADEPMTTFVVCNECGNRWK 298
>gi|3133178|dbj|BAA28177.1| unnamed protein product [Mus musculus]
Length = 292
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 77/175 (44%), Gaps = 18/175 (10%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVK 249
D R++ E L AL + ++ +D CD ++A E ++++ + Y +
Sbjct: 129 DSVRDKCVEMLSAAL-----KAEDNFKDYGVNCD--KLASEIEDHIYQELKSTDMKYRNR 181
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYL 309
RS + NL DP NP RR VL G + PE + KM++EEM SD R L + +E + +
Sbjct: 182 VRSRISNLKDPRNPGLRRNVLSGAISPELIAKMTAEEMASDELRELRNAMTQEAIREHQM 241
Query: 310 PWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
GG + C +C KK + Q SA + C C W+
Sbjct: 242 AKTGGTTTDLLR-----CSKC-KKKNCTYNQVQTRSADAPMTTFVLCNECGNRWK 290
>gi|355723558|gb|AES07930.1| transcription elongation factor A , 1 [Mustela putorius furo]
Length = 314
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 11/144 (7%)
Query: 221 GCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALI 280
G D + E ++++ ++ Y+ + RS + NL D +NP+ R+ VL G++ P+
Sbjct: 176 GADEEELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFA 235
Query: 281 KMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGN 340
+M++EEM SD + + + + KE + + GG + + CG+C KK +
Sbjct: 236 RMTAEEMASDELKEMRKNLTKEAIREHQMAKTGG-----TQTDLFTCGKC-KKKNCTYTQ 289
Query: 341 DQNSSAKR-----IKCLNCYQYWE 359
Q SA + C C W+
Sbjct: 290 VQTRSADEPMTTFVVCNECGNRWK 313
>gi|349602860|gb|AEP98866.1| Transcription elongation factor A protein 1-like protein, partial
[Equus caballus]
Length = 290
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 11/144 (7%)
Query: 221 GCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALI 280
G D + E ++++ ++ Y+ + RS + NL D +NP+ R+ VL G++ P+
Sbjct: 151 GADEEELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFA 210
Query: 281 KMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGN 340
+M++EEM SD + + + + KE + + GG + + CG+C KK +
Sbjct: 211 RMTAEEMASDELKEMRKNLTKEAIREHQMAKTGG-----TQTDLFTCGKC-KKKNCTYTQ 264
Query: 341 DQNSSAKR-----IKCLNCYQYWE 359
Q SA + C C W+
Sbjct: 265 VQTRSADEPMTTFVVCNECGNRWK 288
>gi|6755728|ref|NP_035671.1| transcription elongation factor A protein 1 isoform 2 [Mus
musculus]
gi|28380825|sp|P10711.2|TCEA1_MOUSE RecName: Full=Transcription elongation factor A protein 1; AltName:
Full=Transcription elongation factor S-II protein 1;
AltName: Full=Transcription elongation factor TFIIS.o
gi|201939|gb|AAA40419.1| transcription factor S-II [Mus musculus]
gi|13543739|gb|AAH06022.1| Transcription elongation factor A (SII) 1 [Mus musculus]
gi|38181911|gb|AAH61490.1| Transcription elongation factor A (SII) 1 [Mus musculus]
gi|52789281|gb|AAH83127.1| Transcription elongation factor A (SII) 1 [Mus musculus]
gi|74193672|dbj|BAE22787.1| unnamed protein product [Mus musculus]
Length = 301
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 11/144 (7%)
Query: 221 GCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALI 280
G D + E ++++ ++ Y+ + RS + NL D +NP+ R+ VL G++ P+
Sbjct: 162 GADEEELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFA 221
Query: 281 KMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGN 340
+M++EEM SD + + + + KE + + GG + + CG+C KK +
Sbjct: 222 RMTAEEMASDELKEMRKNLTKEAIREHQMAKTGG-----TQTDLFTCGKC-KKKNCTYTQ 275
Query: 341 DQNSSAKR-----IKCLNCYQYWE 359
Q SA + C C W+
Sbjct: 276 VQTRSADEPMTTFVVCNECGNRWK 299
>gi|45549559|ref|NP_573049.2| CG8117 [Drosophila melanogaster]
gi|45446964|gb|AAF48482.2| CG8117 [Drosophila melanogaster]
gi|66571116|gb|AAY51523.1| IP08861p [Drosophila melanogaster]
gi|66772509|gb|AAY55566.1| IP09061p [Drosophila melanogaster]
gi|220943416|gb|ACL84251.1| CG8117-PA [synthetic construct]
gi|220953346|gb|ACL89216.1| CG8117-PA [synthetic construct]
Length = 162
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 8/143 (5%)
Query: 221 GC-DPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEAL 279
GC DP +A E ++ Y+ + RS L NL DP+NP+ R+K LLG + PE L
Sbjct: 25 GCGDPDDMAAKLEDAIYGDLNGCKVKYKNRIRSRLANLRDPKNPELRQKFLLGQITPEEL 84
Query: 280 IKMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTN-H 338
KM+ EEM SD +++ Q+ ++ + + G + ++ C RC + + H
Sbjct: 85 SKMTPEEMASDDMKQMRQKYVQDSINAAQMAKVQG-----TKTDQFKCERCDKRNCSQLH 139
Query: 339 GNDQNSS-AKRIKCLNCYQYWES 360
D + + C C W+S
Sbjct: 140 IRDGDEPIITFVICDECGNRWKS 162
>gi|126342557|ref|XP_001363001.1| PREDICTED: transcription elongation factor A protein 1-like isoform
2 [Monodelphis domestica]
Length = 280
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 11/144 (7%)
Query: 221 GCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALI 280
G D + E ++++ ++ Y+ + RS + NL D +NP+ R+ VL G++ P+
Sbjct: 141 GADEEELGSQIEEAIYQELRNTDMKYKNRVRSRIANLKDAKNPNLRKNVLCGNIPPDLFA 200
Query: 281 KMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGN 340
+M++EEM SD + + + + KE + + GG + + CG+C KK +
Sbjct: 201 RMTAEEMASDELKEIRKNLTKEAIREHQMAKTGG-----TQTDLFTCGKC-KKKNCTYTQ 254
Query: 341 DQNSSAKR-----IKCLNCYQYWE 359
Q SA + C C W+
Sbjct: 255 VQTRSADEPMTTFVVCNECGNRWK 278
>gi|291391943|ref|XP_002712400.1| PREDICTED: transcription elongation factor A 1 isoform 1
[Oryctolagus cuniculus]
Length = 300
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 11/144 (7%)
Query: 221 GCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALI 280
G D + E ++++ ++ Y+ + RS + NL D +NP+ R+ VL G++ P+
Sbjct: 161 GADEEELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFA 220
Query: 281 KMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGN 340
+M++EEM SD + + + + KE + + GG + + CG+C KK +
Sbjct: 221 RMTAEEMASDELKEMRKNLTKEAIREHQMAKTGG-----TQTDLFTCGKC-KKKNCTYTQ 274
Query: 341 DQNSSAKR-----IKCLNCYQYWE 359
Q SA + C C W+
Sbjct: 275 VQTRSADEPMTTFVVCNECGNRWK 298
>gi|403300334|ref|XP_003940898.1| PREDICTED: transcription elongation factor A protein 1 [Saimiri
boliviensis boliviensis]
Length = 301
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 11/144 (7%)
Query: 221 GCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALI 280
G D + E ++++ ++ Y+ + RS + NL D +NP+ R+ VL G++ P+
Sbjct: 162 GADEEELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFA 221
Query: 281 KMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGN 340
+M++EEM SD + + + + KE + + GG + + CG+C KK +
Sbjct: 222 RMTAEEMASDELKEMRKNLTKEAIREHQMAKTGG-----TQTDLFTCGKC-KKKNCTYTQ 275
Query: 341 DQNSSAKR-----IKCLNCYQYWE 359
Q SA + C C W+
Sbjct: 276 VQTRSADEPMTTFVVCNECGNRWK 299
>gi|74146960|dbj|BAE25455.1| unnamed protein product [Mus musculus]
Length = 301
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 11/144 (7%)
Query: 221 GCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALI 280
G D + E ++++ ++ Y+ + RS + NL D +NP+ R+ VL G++ P+
Sbjct: 162 GADEEELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFA 221
Query: 281 KMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGN 340
+M++EEM SD + + + + KE + + GG + + CG+C KK +
Sbjct: 222 RMTAEEMASDELKEMRKNLTKEAIREHQMAKTGG-----TQTDLFTCGKC-KKKNCTYTQ 275
Query: 341 DQNSSAKR-----IKCLNCYQYWE 359
Q SA + C C W+
Sbjct: 276 VQTRSADEPMTTFVVCNECGNRWK 299
>gi|169780530|ref|XP_001824729.1| transcription elongation factor S-II [Aspergillus oryzae RIB40]
gi|238505302|ref|XP_002383880.1| transcription elongation factor S-II [Aspergillus flavus NRRL3357]
gi|83773469|dbj|BAE63596.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220689994|gb|EED46344.1| transcription elongation factor S-II [Aspergillus flavus NRRL3357]
gi|391872022|gb|EIT81165.1| transcription elongation factor TFIIS/Cofactor of enhancer-binding
protein [Aspergillus oryzae 3.042]
Length = 304
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 56/119 (47%), Gaps = 11/119 (9%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
Y K RS+ NL + NP R +VL V P+ ++MS +E+ SD R + +I+KE
Sbjct: 191 YRTKIRSLFQNLKNKSNPSLRIRVLSNDVTPDQFVRMSHDELRSDEQREKDAKIQKENMD 250
Query: 306 DRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
+ + ST CG+CG +K T + Q SA CLNC + W+
Sbjct: 251 KAMVAQAERSI-----STSLQCGKCGQRKVT-YTEAQTRSADEPMTLFCTCLNCGKSWK 303
>gi|119607145|gb|EAW86739.1| transcription elongation factor A (SII), 1, isoform CRA_a [Homo
sapiens]
Length = 287
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 11/144 (7%)
Query: 221 GCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALI 280
G D + E ++++ ++ Y+ + RS + NL D +NP+ R+ VL G++ P+
Sbjct: 148 GADEEELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFA 207
Query: 281 KMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGN 340
+M++EEM SD + + + + KE + + GG + + CG+C KK +
Sbjct: 208 RMTAEEMASDELKEMRKNLTKEAIREHQMAKTGG-----TQTDLFTCGKC-KKKNCTYTQ 261
Query: 341 DQNSSAKR-----IKCLNCYQYWE 359
Q SA + C C W+
Sbjct: 262 VQTRSADEPMTTFVVCNECGNRWK 285
>gi|353234293|emb|CCA66319.1| related to transcription elongation factor TFIIS [Piriformospora
indica DSM 11827]
Length = 280
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 77/178 (43%), Gaps = 24/178 (13%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFE--KWGHSFGTYE 247
D R+ R +Y AL SG E + ++ AI E F G S Y
Sbjct: 117 DKTRDSTRPLIYNALCIDSGAPSELI---------LKRAIAVEEAAFTICGKGESNSDYR 167
Query: 248 VKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDR 307
K RS+ NL ENP R+ V+ G + E L+ MSS +M S+ ++ ++ I++E
Sbjct: 168 NKMRSLFLNLKGKENPSLRQGVVSGDISAEKLVTMSSSDMASEERKQKDKAIEEENL--- 224
Query: 308 YLPWKGGYLGPIYHST-RYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
+K G T + CG+C +KT + Q SA + C+NC W+
Sbjct: 225 ---FKSLGAGEQQAETDAFQCGKCKQRKTI-YRQAQTRSADEPMTTFVTCVNCGNRWK 278
>gi|118100673|ref|XP_417425.2| PREDICTED: transcription elongation factor A protein 2 [Gallus
gallus]
Length = 300
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 12/147 (8%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVK 249
D R + RE L AL + D++ G D +A E +++ ++ Y+ +
Sbjct: 137 DAVRNKCREMLTTAL-----QADDDYI--AIGADCEHIAAQIEECIYQDIKNTDMKYKNR 189
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYL 309
RS + NL D +NP+ ++ VL G + PE + M+SEEM S+ + + + + KE + +
Sbjct: 190 VRSRISNLKDSKNPELKKNVLCGAITPEQIAVMTSEEMASNELKEIRKAMTKEAIREHQM 249
Query: 310 PWKGGYLGPIYHSTRYMCGRCGHKKTT 336
GG + + CG+C K T
Sbjct: 250 AKTGG-----TQTDLFTCGKCKKKNCT 271
>gi|114620135|ref|XP_001151569.1| PREDICTED: transcription elongation factor A protein 1 isoform 3
[Pan troglodytes]
gi|397505491|ref|XP_003823294.1| PREDICTED: transcription elongation factor A protein 1 isoform 2
[Pan paniscus]
gi|410212654|gb|JAA03546.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
gi|410251520|gb|JAA13727.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
gi|410298810|gb|JAA28005.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
gi|410341537|gb|JAA39715.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
Length = 280
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 11/144 (7%)
Query: 221 GCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALI 280
G D + E ++++ ++ Y+ + RS + NL D +NP+ R+ VL G++ P+
Sbjct: 141 GADEEELGSQIEEAIYQEMRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFA 200
Query: 281 KMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGN 340
+M++EEM SD + + + + KE + + GG + + CG+C KK +
Sbjct: 201 RMTAEEMASDELKEMRKNLTKEAIREHQMAKTGG-----TQTDLFTCGKC-KKKNCTYTQ 254
Query: 341 DQNSSAKR-----IKCLNCYQYWE 359
Q SA + C C W+
Sbjct: 255 VQTRSADEPMTTFVVCNECGNRWK 278
>gi|145234013|ref|XP_001400379.1| transcription elongation factor S-II [Aspergillus niger CBS 513.88]
gi|134057319|emb|CAK44518.1| unnamed protein product [Aspergillus niger]
gi|350635099|gb|EHA23461.1| hypothetical protein ASPNIDRAFT_37464 [Aspergillus niger ATCC 1015]
Length = 303
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 69/151 (45%), Gaps = 16/151 (10%)
Query: 219 LNGCDPIRVAIT----AESLMFEKWG-HSFGTYEVKYRSILFNLMDPENPDFRRKVLLGH 273
LN +P R ++ E+ F G + Y K RS+ NL + NP R +VL G
Sbjct: 158 LNSVEPPRTVLSKASAVEAAAFSDLGPETKEQYRTKIRSLYQNLKNKSNPTLRVRVLNGD 217
Query: 274 VKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHK 333
V PE ++MS +E+ S + +++I+KE + + ST CG+CG +
Sbjct: 218 VTPEQFVRMSHDELRSAEQQERDRKIQKENMDKAMVAQAERSI-----STSLQCGKCGQR 272
Query: 334 KTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
K T + Q SA C+NC + W+
Sbjct: 273 KVT-YTEAQTRSADEPMTLFCTCMNCGKSWK 302
>gi|440897844|gb|ELR49454.1| Transcription elongation factor A protein 3, partial [Bos grunniens
mutus]
Length = 328
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 73/175 (41%), Gaps = 16/175 (9%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVK 249
D R++ E L AL + D++ +D CD + I L + + Y +
Sbjct: 163 DSVRDKCVEMLSAAL-----KADDDYKDYGVNCDKMASEIEDHILELGELKSTDMKYRNR 217
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYL 309
RS + NL DP NP RR VL G + + KM++EEM SD R L + +E + +
Sbjct: 218 VRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDELRELRNAMTQEAIREHQM 277
Query: 310 PWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
GG ++ C +C KK + Q SA + C C W+
Sbjct: 278 AKTGGTTTDLFQ-----CSKC-KKKNCTYNQVQTRSADEPMTTFVLCNECGNRWK 326
>gi|395841854|ref|XP_003793745.1| PREDICTED: transcription elongation factor A protein 1 isoform 2
[Otolemur garnettii]
Length = 280
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 11/144 (7%)
Query: 221 GCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALI 280
G D + E ++++ ++ Y+ + RS + NL D +NP+ R+ VL G++ P+
Sbjct: 141 GADEEELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFA 200
Query: 281 KMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGN 340
+M++EEM SD + + + + KE + + GG + + CG+C KK +
Sbjct: 201 RMTAEEMASDELKEMRKNLTKEAIREHQMAKTGG-----TQTDLFTCGKC-KKKNCTYTQ 254
Query: 341 DQNSSAKR-----IKCLNCYQYWE 359
Q SA + C C W+
Sbjct: 255 VQTRSADEPMTTFVVCNECGNRWK 278
>gi|296480638|tpg|DAA22753.1| TPA: transcription elongation factor A protein 1 [Bos taurus]
Length = 286
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 59/116 (50%), Gaps = 5/116 (4%)
Query: 221 GCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALI 280
G D + E ++++ ++ Y+ + RS + NL D +NP+ R+ VL G++ P+
Sbjct: 162 GADEEELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFA 221
Query: 281 KMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTT 336
+M++EEM SD + + + + KE + + GG + + CG+C K T
Sbjct: 222 RMTAEEMASDELKEMRKNLTKEAIREHQMAKTGG-----TQTDLFTCGKCKKKNCT 272
>gi|197129381|gb|ACH45879.1| putative transcription elongation factor A2 [Taeniopygia guttata]
Length = 300
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 72/151 (47%), Gaps = 13/151 (8%)
Query: 186 IKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGT 245
I C D R + RE L AL + D++ G D +A E +++ ++
Sbjct: 134 ITC-DAVRNKCREMLTAAL-----QADDDYI--AIGADCEHIAAQIEECIYQDVKNTDMK 185
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
Y+ + RS + NL D +NP+ ++ VL G + PE + M+SEEM S+ + + + + KE
Sbjct: 186 YKNRVRSRISNLKDSKNPELKKNVLCGAITPEQIAVMTSEEMASNELKEIRKAMTKEAIR 245
Query: 306 DRYLPWKGGYLGPIYHSTRYMCGRCGHKKTT 336
+ + GG + + CG+C K T
Sbjct: 246 EHQMAKTGG-----TQTDLFTCGKCKKKNCT 271
>gi|195030242|ref|XP_001987977.1| GH10818 [Drosophila grimshawi]
gi|193903977|gb|EDW02844.1| GH10818 [Drosophila grimshawi]
Length = 350
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 79/176 (44%), Gaps = 21/176 (11%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGC-DPIRVAITAESLMFEKWGHSFGTYEV 248
D R + RE L AL GEV + GC +P +A E ++ ++ ++ Y+
Sbjct: 188 DAVRLKCREMLATALK--MGEVPD-------GCAEPEEMAAELEDAIYMEFKNTDMKYKN 238
Query: 249 KYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRY 308
+ RS + NL DP+NP R + G V + L KM+ EEM SD ++L ++ KE +D
Sbjct: 239 RIRSRVANLKDPKNPGLRGNFMCGAVSAKQLAKMTPEEMASDEMKKLREKFVKEAINDAQ 298
Query: 309 LPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
L G + CG+C K+ + Q SA + C C W+
Sbjct: 299 LATVQGTKTDLLK-----CGKC-KKRNCTYNQLQTRSADEPMTTFVMCNECGNRWK 348
>gi|291387971|ref|XP_002710525.1| PREDICTED: transcription elongation factor A 1 [Oryctolagus
cuniculus]
Length = 329
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 11/144 (7%)
Query: 221 GCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALI 280
G D + E ++++ ++ Y+ + RS + NL D +NP+ R+ VL G++ P+
Sbjct: 162 GADEEELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFA 221
Query: 281 KMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGN 340
+M++EEM SD + + + + KE + + GG + + CG+C KK +
Sbjct: 222 RMTAEEMASDELKEMRKNLTKEAIREHQMAKTGG-----TQTDLFTCGKC-KKKNCTYTQ 275
Query: 341 DQNSSAKR-----IKCLNCYQYWE 359
Q SA + C C W+
Sbjct: 276 VQTRSADEPMTTFVVCNECGNRWK 299
>gi|406699653|gb|EKD02852.1| positive transcription elongation factor [Trichosporon asahii var.
asahii CBS 8904]
Length = 317
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 59/111 (53%), Gaps = 8/111 (7%)
Query: 227 VAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEE 286
+ I E+ K+ +S Y K RS+ N+ D NP R +++LG V P+ +++MS EE
Sbjct: 186 IGIEREAFKLLKF-NSGNEYRAKMRSLFLNIKDKGNPGLRNEIVLGQVTPDKVVRMSKEE 244
Query: 287 MVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHST-RYMCGRCGHKKTT 336
M S+ R LN+++ +++ L +K +G T + C RC +K T
Sbjct: 245 MASESVRLLNEKL-----AEKNL-FKAKAVGVTQAETDAFKCSRCQQRKCT 289
>gi|405121407|gb|AFR96176.1| positive transcription elongation factor [Cryptococcus neoformans
var. grubii H99]
Length = 333
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 58/125 (46%), Gaps = 11/125 (8%)
Query: 240 GHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQI 299
+ E + RS+ NL D NP R +++LG+V E + MS +EM S+ R L ++I
Sbjct: 213 ANQLAKSEQEMRSLFLNLKDKGNPALRNEIVLGYVSTEKVASMSKDEMASESVRMLKEKI 272
Query: 300 KKERASDRYLPWKGGYLGPIYHST-RYMCGRCGHKKTTNHGNDQNSS----AKRIKCLNC 354
ASD +K +G T + CGRC +K T + S+ + C NC
Sbjct: 273 ----ASDNL--FKAKAVGVTQAETDAFKCGRCHQRKCTYYQMQTRSADEPMTTFVTCTNC 326
Query: 355 YQYWE 359
W+
Sbjct: 327 NNRWK 331
>gi|194857365|ref|XP_001968937.1| GG24225 [Drosophila erecta]
gi|190660804|gb|EDV57996.1| GG24225 [Drosophila erecta]
Length = 313
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 78/176 (44%), Gaps = 21/176 (11%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGC-DPIRVAITAESLMFEKWGHSFGTYEV 248
D R + RE L AL GEV E GC +P +A E ++ ++ ++ Y+
Sbjct: 151 DAVRIKCREMLAAALK--IGEVPE-------GCGEPEEMAAELEDAIYSEFKNTDMKYKN 201
Query: 249 KYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRY 308
+ RS + NL DP+NP R + G V + L KM+ EEM SD ++L ++ KE +D
Sbjct: 202 RIRSRVANLKDPKNPGLRGNFMCGAVTAKQLAKMTPEEMASDEMKKLREKFVKEAINDAQ 261
Query: 309 LPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
L G + C +C K+ + Q SA + C C W+
Sbjct: 262 LATVQGTKTDLLK-----CAKC-KKRNCTYNQLQTRSADEPMTTFVMCNECGNRWK 311
>gi|432094021|gb|ELK25813.1| Transcription elongation factor A protein 2 [Myotis davidii]
Length = 131
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 61/125 (48%), Gaps = 1/125 (0%)
Query: 235 MFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRR 294
+F G++ Y+ + RS + NL D +NPD RR VL G + P+ + M+SEEM SD +
Sbjct: 5 IFRDVGNTDMKYKNRVRSRIANLKDAKNPDLRRNVLCGTITPQQIAVMTSEEMASDELKE 64
Query: 295 LNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKRIKCLNC 354
+ + + KE + + GG ++ ++ C + + +D+ + + C C
Sbjct: 65 IRKAMTKEAIREHQMARTGGTQTDLFTCSKCRKKNCTYTQVQTRSSDEPMTT-FVVCNEC 123
Query: 355 YQYWE 359
W+
Sbjct: 124 GNRWK 128
>gi|326916345|ref|XP_003204468.1| PREDICTED: LOW QUALITY PROTEIN: PHD finger protein 3-like [Meleagris
gallopavo]
Length = 2064
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 63/124 (50%), Gaps = 12/124 (9%)
Query: 170 EEKPASA----VVPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPI 225
E+ P SA VP S + ++ ++E L K L+ S ++ EE K
Sbjct: 913 EKGPVSAAHLPTVPASKPSADQIRHSVKQSLKEILMKRLTDSSLKIPEERAAK------- 965
Query: 226 RVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSE 285
VA E +F + + Y+ KYRS++FNL DP+N +KVL G V P+ LIKMS E
Sbjct: 966 -VATRIERELFSFFRDTDSKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIKMSPE 1024
Query: 286 EMVS 289
E+ S
Sbjct: 1025 ELAS 1028
>gi|221042038|dbj|BAH12696.1| unnamed protein product [Homo sapiens]
Length = 280
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 11/144 (7%)
Query: 221 GCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALI 280
G D + E ++++ ++ Y+ + RS + NL D +NP+ R+ VL G++ P+
Sbjct: 141 GADEEELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFA 200
Query: 281 KMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGN 340
+M++EEM SD + + + + KE + + GG + + CG+C KK +
Sbjct: 201 RMTAEEMASDELKEMRKNLTKEAIREHQMAKTGG-----TQTDLFTCGKC-KKKNCTYTQ 254
Query: 341 DQNSSAKR-----IKCLNCYQYWE 359
Q SA + C C W+
Sbjct: 255 VQTRSADEPMTTFVVCNECGNRWK 278
>gi|196008337|ref|XP_002114034.1| hypothetical protein TRIADDRAFT_58083 [Trichoplax adhaerens]
gi|190583053|gb|EDV23124.1| hypothetical protein TRIADDRAFT_58083 [Trichoplax adhaerens]
Length = 302
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 65/132 (49%), Gaps = 15/132 (11%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
Y+ + RS + NL D +NP+ +KVL G + PE + KM++EEM SD ++L Q KE
Sbjct: 176 YKNRVRSRISNLKDSKNPNLCQKVLSGIITPEQIAKMTAEEMASDEMKKLRQGYAKEGIR 235
Query: 306 DRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE- 359
D + G + CG+C HKK ++ Q SA + C C W+
Sbjct: 236 DAQMAVTQGTKTDL-----LTCGKC-HKKNCSYNQMQTRSADEPMTTFVFCHECGHRWKL 289
Query: 360 ---STTALYGLL 368
S +L+G++
Sbjct: 290 LVSSYMSLFGIV 301
>gi|291391945|ref|XP_002712401.1| PREDICTED: transcription elongation factor A 1 isoform 2
[Oryctolagus cuniculus]
Length = 279
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 11/144 (7%)
Query: 221 GCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALI 280
G D + E ++++ ++ Y+ + RS + NL D +NP+ R+ VL G++ P+
Sbjct: 140 GADEEELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFA 199
Query: 281 KMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGN 340
+M++EEM SD + + + + KE + + GG + + CG+C KK +
Sbjct: 200 RMTAEEMASDELKEMRKNLTKEAIREHQMAKTGG-----TQTDLFTCGKC-KKKNCTYTQ 253
Query: 341 DQNSSAKR-----IKCLNCYQYWE 359
Q SA + C C W+
Sbjct: 254 VQTRSADEPMTTFVVCNECGNRWK 277
>gi|324513389|gb|ADY45503.1| Transcription elongation factor S-II [Ascaris suum]
Length = 301
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 74/176 (42%), Gaps = 19/176 (10%)
Query: 189 NDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEV 248
ND R + + L AL +E+ D + DP +AI E +FE + Y
Sbjct: 138 NDEMRNKCIQMLLSALQ------SKELPDGTH--DPEELAIKIEKKLFEVHRGTGDKYRS 189
Query: 249 KYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRY 308
RS +FNL D +N R VL G V P M+SEEM SD R ++ K+ +
Sbjct: 190 AVRSRVFNLRDKKNAALRENVLTGVVTPAKFAVMTSEEMASDEMRSQREKFTKQAIEEHQ 249
Query: 309 LPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
+ + G ++ CG+CG KK + Q SA + C C W+
Sbjct: 250 MSVQEGTPSDMFK-----CGKCG-KKNCTYTQVQTRSADEPMTTFVFCRECGNRWK 299
>gi|118088827|ref|XP_426199.2| PREDICTED: PHD finger protein 3 [Gallus gallus]
Length = 2065
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 63/124 (50%), Gaps = 12/124 (9%)
Query: 170 EEKPASAV----VPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPI 225
E+ P SA VP S + ++ ++E L K L+ S ++ EE K
Sbjct: 913 EKGPTSATHLPNVPASKPSADQIRHSVKQSLKEILMKRLTDSSLKIPEERAAK------- 965
Query: 226 RVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSE 285
VA E +F + + Y+ KYRS++FNL DP+N +KVL G V P+ LIKMS E
Sbjct: 966 -VATRIERELFSFFRDTDSKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIKMSPE 1024
Query: 286 EMVS 289
E+ S
Sbjct: 1025 ELAS 1028
>gi|45439355|ref|NP_958845.1| transcription elongation factor A protein 1 isoform 2 [Homo
sapiens]
gi|332213783|ref|XP_003256010.1| PREDICTED: transcription elongation factor A protein 1 isoform 2
[Nomascus leucogenys]
gi|426359605|ref|XP_004047058.1| PREDICTED: transcription elongation factor A protein 1 isoform 2
[Gorilla gorilla gorilla]
gi|37072|emb|CAA40484.1| transcription elongation factor [Homo sapiens]
Length = 280
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 11/144 (7%)
Query: 221 GCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALI 280
G D + E ++++ ++ Y+ + RS + NL D +NP+ R+ VL G++ P+
Sbjct: 141 GADEEELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFA 200
Query: 281 KMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGN 340
+M++EEM SD + + + + KE + + GG + + CG+C KK +
Sbjct: 201 RMTAEEMASDELKEMRKNLTKEAIREHQMAKTGG-----TQTDLFTCGKC-KKKNCTYTQ 254
Query: 341 DQNSSAKR-----IKCLNCYQYWE 359
Q SA + C C W+
Sbjct: 255 VQTRSADEPMTTFVVCNECGNRWK 278
>gi|344272860|ref|XP_003408247.1| PREDICTED: transcription elongation factor A protein 1-like
[Loxodonta africana]
Length = 380
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 71/150 (47%), Gaps = 11/150 (7%)
Query: 221 GCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALI 280
G D + E ++++ ++ Y+ + RS + NL D +NP+ R+ VL G++ P+
Sbjct: 176 GADEEELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFA 235
Query: 281 KMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGN 340
+M++EEM SD + + + + KE + + GG + + CG+C KK +
Sbjct: 236 RMTAEEMASDELKEMRKNLTKEAIREHQMAKTGG-----TQTDLFTCGKC-KKKNCTYTQ 289
Query: 341 DQNSSAKR-----IKCLNCYQYWESTTALY 365
Q SA + C C W+ + A +
Sbjct: 290 VQTRSADEPMTTFVVCNECGNRWKMSEAPF 319
>gi|16923938|ref|NP_476439.1| transcription elongation factor A protein 2 [Rattus norvegicus]
gi|28380169|sp|Q63799.1|TCEA2_RAT RecName: Full=Transcription elongation factor A protein 2; AltName:
Full=Protein S-II-T1; AltName: Full=Testis-specific
S-II; AltName: Full=Transcription elongation factor S-II
protein 2; AltName: Full=Transcription elongation factor
TFIIS.l
gi|712842|dbj|BAA02310.1| transcription elongation factor S-II [Rattus sp.]
Length = 299
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 76/174 (43%), Gaps = 9/174 (5%)
Query: 186 IKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGT 245
I C D R + RE L AL V V C+ + I E +F G++
Sbjct: 133 ITC-DAVRNKCREMLTLALQTDHDHVAVGV-----SCEHLSSQI--EECIFLDVGNTDMK 184
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
Y+ + RS + NL D +NP RR VL G + P+ + M+SEEM SD + + + + KE
Sbjct: 185 YKNRVRSRISNLKDAKNPGLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIR 244
Query: 306 DRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKRIKCLNCYQYWE 359
+ + GG ++ + C + + +D+ + + C C W+
Sbjct: 245 EHQMARTGGTQTDLFTCNKCRKKNCTYTQVQTRSSDEPMTT-YVVCNECGNRWK 297
>gi|402878243|ref|XP_003902806.1| PREDICTED: transcription elongation factor A protein 1, partial
[Papio anubis]
Length = 254
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 59/116 (50%), Gaps = 5/116 (4%)
Query: 221 GCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALI 280
G D + E ++++ ++ Y+ + RS + NL D +NP+ R+ VL G++ P+
Sbjct: 141 GADEEELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFA 200
Query: 281 KMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTT 336
+M++EEM SD + + + + KE + + GG + + CG+C K T
Sbjct: 201 RMTAEEMASDELKEMRKNLTKEAIREHQMAKTGG-----TQTDLFTCGKCKKKNCT 251
>gi|119607146|gb|EAW86740.1| transcription elongation factor A (SII), 1, isoform CRA_b [Homo
sapiens]
Length = 260
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 11/144 (7%)
Query: 221 GCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALI 280
G D + E ++++ ++ Y+ + RS + NL D +NP+ R+ VL G++ P+
Sbjct: 121 GADEEELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFA 180
Query: 281 KMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGN 340
+M++EEM SD + + + + KE + + GG + + CG+C KK +
Sbjct: 181 RMTAEEMASDELKEMRKNLTKEAIREHQMAKTGG-----TQTDLFTCGKC-KKKNCTYTQ 234
Query: 341 DQNSSAKR-----IKCLNCYQYWE 359
Q SA + C C W+
Sbjct: 235 VQTRSADEPMTTFVVCNECGNRWK 258
>gi|201937|gb|AAA40418.1| transcription factor S-II [Mus musculus]
Length = 266
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 11/144 (7%)
Query: 221 GCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALI 280
G D + E ++++ ++ Y+ + RS + NL D +NP+ R+ VL G++ P+
Sbjct: 127 GADEEELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFA 186
Query: 281 KMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGN 340
+M++EEM SD + + + + KE + + GG + + CG+C KK +
Sbjct: 187 RMTAEEMASDELKEMRKNLTKEAIREHQMAKTGG-----TQTDLFTCGKC-KKKNCTYTQ 240
Query: 341 DQNSSAKR-----IKCLNCYQYWE 359
Q SA + C C W+
Sbjct: 241 VQTRSADEPMTTFVVCNECGNRWK 264
>gi|6678235|ref|NP_033352.1| transcription elongation factor A protein 2 [Mus musculus]
gi|28380213|sp|Q9QVN7.2|TCEA2_MOUSE RecName: Full=Transcription elongation factor A protein 2; AltName:
Full=Protein S-II-T1; AltName: Full=Testis-specific
S-II; AltName: Full=Transcription elongation factor S-II
protein 2; AltName: Full=Transcription elongation factor
TFIIS.l
gi|2055284|dbj|BAA19752.1| S-II-T1 [Mus musculus]
gi|5381259|dbj|BAA82313.1| transcription elongation factor [Mus musculus]
gi|127798625|gb|AAH49617.2| Transcription elongation factor A (SII), 2 [Mus musculus]
gi|127799183|gb|AAH65786.2| Transcription elongation factor A (SII), 2 [Mus musculus]
gi|187951073|gb|AAI38506.1| Transcription elongation factor A (SII), 2 [Mus musculus]
gi|187953941|gb|AAI38505.1| Transcription elongation factor A (SII), 2 [Mus musculus]
Length = 299
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 76/174 (43%), Gaps = 9/174 (5%)
Query: 186 IKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGT 245
I C D R + RE L AL V V C+ + I E +F G++
Sbjct: 133 ITC-DAVRNKCREMLTLALQTDHDHVAVGV-----NCEHLSSQI--EECIFLDVGNTDMK 184
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
Y+ + RS + NL D +NP RR VL G + P+ + M+SEEM SD + + + + KE
Sbjct: 185 YKNRVRSRISNLKDAKNPGLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIR 244
Query: 306 DRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKRIKCLNCYQYWE 359
+ + GG ++ + C + + +D+ + + C C W+
Sbjct: 245 EHQMARTGGTQTDLFTCNKCRKKNCTYTQVQTRSSDEPMTTY-VVCNECGNRWK 297
>gi|338728315|ref|XP_001489456.3| PREDICTED: transcription elongation factor A protein 1-like [Equus
caballus]
Length = 409
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 70/149 (46%), Gaps = 11/149 (7%)
Query: 221 GCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALI 280
G D + E ++++ ++ Y+ + RS + NL D +NP+ R+ VL G++ P+
Sbjct: 227 GADEEELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFA 286
Query: 281 KMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGN 340
+M++EEM SD + + + + KE + + GG + + CG+C KK +
Sbjct: 287 RMTAEEMASDELKEMRKNLTKEAIREHQMAKTGG-----TQTDLFTCGKC-KKKNCTYTQ 340
Query: 341 DQNSSAKR-----IKCLNCYQYWESTTAL 364
Q SA + C C W+ T +
Sbjct: 341 VQTRSADEPMTTFVVCNECGNRWKDTLGV 369
>gi|126342511|ref|XP_001362232.1| PREDICTED: transcription elongation factor A protein 1-like isoform
1 [Monodelphis domestica]
Length = 301
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 68/144 (47%), Gaps = 11/144 (7%)
Query: 221 GCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALI 280
G D + E ++++ ++ Y+ + RS + NL D +NP+ R+ VL G++ P+
Sbjct: 162 GADEEELGSQIEEAIYQELRNTDMKYKNRVRSRIANLKDAKNPNLRKNVLCGNIPPDLFA 221
Query: 281 KMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGN 340
++++EEM SD + + + + KE + + GG + + CG+C KK +
Sbjct: 222 RLTAEEMASDELKEMRKNLTKEAIREHQMAKTGG-----TQTDLFTCGKC-KKKNCTYTQ 275
Query: 341 DQNSSAKR-----IKCLNCYQYWE 359
Q SA + C C W+
Sbjct: 276 VQTRSADEPMTTFVVCNECGNRWK 299
>gi|73950631|ref|XP_535363.2| PREDICTED: transcription elongation factor A protein 3 [Canis lupus
familiaris]
Length = 348
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 73/343 (21%), Positives = 135/343 (39%), Gaps = 38/343 (11%)
Query: 32 IAALDQLHKSSITCQLLVSTQLVRHLLPLTKHPRQK-IQDTASELILSWRSLFLEQMKGD 90
+ L +L+ ++ QLL +T++ + + KH K + A LI +W+ L
Sbjct: 27 LGLLKKLNSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLLDSPGPPK 86
Query: 91 EENGSFAICGEIKSANVEIAKGKRQITSDEFEQALDVEVVKVRRVDQKGAPRSKKLVGSE 150
E G + AK ++ + ++ + + +R ++ R S
Sbjct: 87 GEKGE----------ERDKAKKEKGLDCSNWKPETGLSPPRKKRAEEPKERRDSVDSKSS 136
Query: 151 FIVTEETNSLDNVDAEAIREEKPASAVVPQK---------LVSMIKCNDYFRERIREKLY 201
+ + S++ ++ + E P + P L D R++ E L
Sbjct: 137 ATSSPKRPSMERSNSGKSKAETPKTPTSPSTPTFAPSVCLLAPCYLTGDSVRDKCVEMLS 196
Query: 202 KALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPE 261
AL + +++ +D CD ++A E ++++ + Y + RS + NL DP
Sbjct: 197 AAL-----KAEDDYKDYGVNCD--KMASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPR 249
Query: 262 NPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYH 321
NP RR VL G + + KM++EEM SD R L + +E + + GG ++
Sbjct: 250 NPSLRRNVLSGAISAGLIAKMTAEEMASDELRELRNAMTQEAIREHQMAKTGGTTTDLFQ 309
Query: 322 STRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
C +C KK + Q SA + C C W+
Sbjct: 310 -----CSKC-KKKNCTYNQVQTRSADEPMTTFVLCNECGNRWK 346
>gi|395511158|ref|XP_003759828.1| PREDICTED: transcription elongation factor A protein 1 [Sarcophilus
harrisii]
Length = 349
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 11/144 (7%)
Query: 221 GCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALI 280
G D + E ++++ ++ Y+ + RS + NL D +NP+ R+ VL G++ P+
Sbjct: 210 GADEEELGSQIEEAIYQELRNTDMKYKNRVRSRIANLKDAKNPNLRKNVLCGNIPPDLFA 269
Query: 281 KMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGN 340
+M++EEM SD + + + + KE + + GG + + CG+C KK +
Sbjct: 270 RMTAEEMASDELKEMRKNLTKEAIREHQMAKTGG-----TQTDLFTCGKC-KKKNCTYTQ 323
Query: 341 DQNSSAKR-----IKCLNCYQYWE 359
Q SA + C C W+
Sbjct: 324 VQTRSADEPMTTFVVCNECGNRWK 347
>gi|344287082|ref|XP_003415284.1| PREDICTED: transcription elongation factor A protein 3-like
[Loxodonta africana]
Length = 500
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 86/202 (42%), Gaps = 24/202 (11%)
Query: 173 PASAVVPQKLVSMI---KC---NDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIR 226
P+S + P SM C D R++ E L AL + D++ +D CD +
Sbjct: 163 PSSPLTPTFAPSMCLLAPCYLTGDSVRDKCVEMLSAAL-----KADDDYKDYGVNCD--K 215
Query: 227 VAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEE 286
+A E ++++ + Y + RS + NL DP NP RR VL G + + KM++EE
Sbjct: 216 MASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEE 275
Query: 287 MVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSA 346
M SD + L + +E + + GG ++ C +C KK + Q SA
Sbjct: 276 MASDELKELRNAMTQEAIREHQMAKTGGTTTDLFQ-----CSKC-KKKNCTYNQVQTRSA 329
Query: 347 KR-----IKCLNCYQYWESTTA 363
+ C C W+ A
Sbjct: 330 DEPMTTFVLCNECGNRWKKGKA 351
>gi|296226473|ref|XP_002758943.1| PREDICTED: transcription elongation factor A protein 1 [Callithrix
jacchus]
Length = 323
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 11/144 (7%)
Query: 221 GCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALI 280
G D + E ++++ ++ Y+ + RS + NL D +NP+ R+ VL G++ P+
Sbjct: 184 GADEEELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFA 243
Query: 281 KMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGN 340
+M++EEM SD + + + + KE + + GG + + CG+C KK +
Sbjct: 244 RMTAEEMASDELKEMRKNLTKEAIREHQMAKTGG-----TQTDLFTCGKC-KKKNCTYTQ 297
Query: 341 DQNSSAKR-----IKCLNCYQYWE 359
Q SA + C C W+
Sbjct: 298 VQTRSADEPMTTFVVCNECGNRWK 321
>gi|395739672|ref|XP_003780672.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor A
protein 1 [Pongo abelii]
Length = 301
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 11/144 (7%)
Query: 221 GCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALI 280
G D + E ++++ ++ Y+ + RS + NL D +NP+ R+ VL G++ P+
Sbjct: 162 GADEEELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFA 221
Query: 281 KMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGN 340
+M++EEM SD + + + + KE + + GG + + CG+C KK +
Sbjct: 222 RMTAEEMPSDELKEMRKNLTKEAIREHQMSKTGG-----TQTDLFTCGKC-KKKNCTYTQ 275
Query: 341 DQNSSAKR-----IKCLNCYQYWE 359
Q SA + C C W+
Sbjct: 276 VQTRSADEPMTTFVVCNECGNRWK 299
>gi|195475592|ref|XP_002090068.1| GE19417 [Drosophila yakuba]
gi|194176169|gb|EDW89780.1| GE19417 [Drosophila yakuba]
Length = 313
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 78/176 (44%), Gaps = 21/176 (11%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGC-DPIRVAITAESLMFEKWGHSFGTYEV 248
D R + RE L AL GEV E GC +P +A E ++ ++ ++ Y+
Sbjct: 151 DAVRIKCREMLAAALK--IGEVPE-------GCGEPEEMAAELEDAIYSEFKNTDMKYKN 201
Query: 249 KYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRY 308
+ RS + NL DP+NP R + G V + L KM+ EEM SD ++L ++ KE +D
Sbjct: 202 RIRSRVANLKDPKNPGLRGNFMCGAVTAKQLAKMTPEEMASDEMKKLREKFVKEAINDAQ 261
Query: 309 LPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
L G + C +C K+ + Q SA + C C W+
Sbjct: 262 LATVQGTKTDLLK-----CAKC-KKRNCTYNQLQTRSADEPMTTFVMCNECGNRWK 311
>gi|449497990|ref|XP_004176897.1| PREDICTED: PHD finger protein 3 isoform 3 [Taeniopygia guttata]
gi|449497992|ref|XP_004176898.1| PREDICTED: PHD finger protein 3 isoform 4 [Taeniopygia guttata]
Length = 1981
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 58/113 (51%), Gaps = 8/113 (7%)
Query: 177 VVPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMF 236
VP S + ++ ++E L K L+ S ++ EE K VA E +F
Sbjct: 843 AVPASKPSADQIRQSVKQSLKEILMKRLTDSSLKIPEERAAK--------VATRIERELF 894
Query: 237 EKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
+ + Y+ KYRS++FNL DP+N +KVL G V P+ LIKMS EE+ S
Sbjct: 895 SFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIKMSPEELAS 947
>gi|294883920|ref|XP_002771106.1| transcription elongation factor SII, putative [Perkinsus marinus
ATCC 50983]
gi|239874344|gb|EER02922.1| transcription elongation factor SII, putative [Perkinsus marinus
ATCC 50983]
Length = 308
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 77/182 (42%), Gaps = 16/182 (8%)
Query: 182 LVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGH 241
++ + +C D R++IR L+KAL + E P A+ E K
Sbjct: 137 VMEVARCGDPKRDKIRNLLFKALRPRRNPEEAE---------PAVRAVEIEEECHSKL-- 185
Query: 242 SFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKK 301
S Y + RSI +NL D NPDF+ KVL+G + ++SE+M S+ + K
Sbjct: 186 SEREYLSQIRSIKYNLTDSSNPDFQWKVLVGLFPRDKYSTLTSEDMASEAKNQHRANAAK 245
Query: 302 ERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSS----AKRIKCLNCYQY 357
+ W + G I S + CG+C +TT SS + CLNC
Sbjct: 246 AALEECQSDWAMRH-GAIQKSGMFQCGKCRKSQTTYFQMQTRSSDEPMTTFVTCLNCGNK 304
Query: 358 WE 359
W+
Sbjct: 305 WK 306
>gi|195338531|ref|XP_002035878.1| GM14545 [Drosophila sechellia]
gi|194129758|gb|EDW51801.1| GM14545 [Drosophila sechellia]
Length = 311
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 78/176 (44%), Gaps = 21/176 (11%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGC-DPIRVAITAESLMFEKWGHSFGTYEV 248
D R + RE L AL GEV E GC +P +A E ++ ++ ++ Y+
Sbjct: 149 DAVRIKCREMLATALK--IGEVPE-------GCGEPEEMAAELEDAIYSEFNNTDMKYKN 199
Query: 249 KYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRY 308
+ RS + NL DP+NP R + G V + L +M+ EEM SD ++L ++ KE +D
Sbjct: 200 RIRSRVANLKDPKNPGLRGNFMCGAVTAKQLARMTPEEMASDEMKKLREKFVKEAINDAQ 259
Query: 309 LPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
L G + C +C K+ + Q SA + C C W+
Sbjct: 260 LATVQGTKTDLLK-----CAKC-KKRNCTYNQLQTRSADEPMTTFVMCNECGNRWK 309
>gi|449497988|ref|XP_004176896.1| PREDICTED: PHD finger protein 3 isoform 2 [Taeniopygia guttata]
Length = 2069
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 58/113 (51%), Gaps = 8/113 (7%)
Query: 177 VVPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMF 236
VP S + ++ ++E L K L+ S ++ EE K VA E +F
Sbjct: 931 AVPASKPSADQIRQSVKQSLKEILMKRLTDSSLKIPEERAAK--------VATRIERELF 982
Query: 237 EKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
+ + Y+ KYRS++FNL DP+N +KVL G V P+ LIKMS EE+ S
Sbjct: 983 SFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIKMSPEELAS 1035
>gi|229094714|ref|NP_001153223.1| transcription elongation factor A protein 1 isoform 1 [Mus
musculus]
Length = 312
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 11/144 (7%)
Query: 221 GCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALI 280
G D + E ++++ ++ Y+ + RS + NL D +NP+ R+ VL G++ P+
Sbjct: 173 GADEEELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFA 232
Query: 281 KMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGN 340
+M++EEM SD + + + + KE + + GG + + CG+C KK +
Sbjct: 233 RMTAEEMASDELKEMRKNLTKEAIREHQMAKTGG-----TQTDLFTCGKC-KKKNCTYTQ 286
Query: 341 DQNSSAKR-----IKCLNCYQYWE 359
Q SA + C C W+
Sbjct: 287 VQTRSADEPMTTFVVCNECGNRWK 310
>gi|449497986|ref|XP_002192240.2| PREDICTED: PHD finger protein 3 isoform 1 [Taeniopygia guttata]
Length = 2086
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 58/113 (51%), Gaps = 8/113 (7%)
Query: 177 VVPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMF 236
VP S + ++ ++E L K L+ S ++ EE K VA E +F
Sbjct: 948 AVPASKPSADQIRQSVKQSLKEILMKRLTDSSLKIPEERAAK--------VATRIERELF 999
Query: 237 EKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
+ + Y+ KYRS++FNL DP+N +KVL G V P+ LIKMS EE+ S
Sbjct: 1000 SFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIKMSPEELAS 1052
>gi|71023611|ref|XP_762035.1| hypothetical protein UM05888.1 [Ustilago maydis 521]
gi|46101600|gb|EAK86833.1| hypothetical protein UM05888.1 [Ustilago maydis 521]
Length = 315
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 63/138 (45%), Gaps = 11/138 (7%)
Query: 227 VAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEE 286
VA+ A L + G Y K RS+ N+ D NPD R +V+ G + + L+ M++EE
Sbjct: 182 VAVEAAILSNQGKGSVTADYRNKVRSLSLNIKDKNNPDLRVRVVEGDIAADKLVTMTNEE 241
Query: 287 MVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSA 346
+ SD +R ++++ + L G + + CGRC +K T + Q SA
Sbjct: 242 LASDKRKREIEELQMQN-----LFKAKGAAAQEAETDAFQCGRCKQRK-TRYYQMQTRSA 295
Query: 347 KR-----IKCLNCYQYWE 359
+ C NC W+
Sbjct: 296 DEPMTTFVTCTNCNHKWK 313
>gi|330921683|ref|XP_003299524.1| hypothetical protein PTT_10532 [Pyrenophora teres f. teres 0-1]
gi|311326749|gb|EFQ92363.1| hypothetical protein PTT_10532 [Pyrenophora teres f. teres 0-1]
Length = 306
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 75/165 (45%), Gaps = 20/165 (12%)
Query: 200 LYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMD 259
+Y L+ +S + +E+ + VA E+ + G Y+ K RS+ NL
Sbjct: 155 MYDGLAYMSEAMPDEI---------LLVAKQVEAAAYTNAGSVNDAYKAKMRSLFQNLKS 205
Query: 260 PENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPI 319
NP R++VL+G V + + M+ +EM SD R L++++K E ++ + +
Sbjct: 206 KSNPALRKRVLIGEVPAKRFVVMTHDEMKSDERRALDEKLKAENMNEAMVAQVEKAI--- 262
Query: 320 YHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
S + C +C KK ++ Q SA +C+NC W+
Sbjct: 263 --SKEFQCSKC-KKKMVSYSQAQTRSADEPMTTFCECMNCGNRWK 304
>gi|259482276|tpe|CBF76603.1| TPA: transcription elongation factor S-II (AFU_orthologue;
AFUA_3G07670) [Aspergillus nidulans FGSC A4]
Length = 304
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 11/118 (9%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
Y K RS+ NL + NP R +VL V PE +KM+ EE+ SD R +++I+KE
Sbjct: 191 YRTKIRSLFQNLKNKSNPTLRVRVLSNEVTPERFVKMTHEELRSDEQREKDRKIQKENMD 250
Query: 306 DRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYW 358
+ + ST CG+CG +K T + Q SA C++C + W
Sbjct: 251 KAMVAQAERSI-----STSLQCGKCGQRKVT-YTEAQTRSADEPMTLFCTCMHCGKSW 302
>gi|335307331|ref|XP_003360800.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor A
protein 3-like [Sus scrofa]
Length = 388
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 77/175 (44%), Gaps = 18/175 (10%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVK 249
D R++ E L AL + D++ +D CD ++A E ++++ + Y +
Sbjct: 225 DSVRDKCVEMLSAAL-----KADDDYKDYGINCD--KMASEIEDHIYQELKSTDMKYRNR 277
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYL 309
RS + NL DP NP RR VL G + + KM++EEM SD R L + +E + +
Sbjct: 278 VRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDELRELRNAMTQEAIREHQM 337
Query: 310 PWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
GG ++ C +C KK + Q SA + C C W+
Sbjct: 338 AKTGGTTTDLFQ-----CSKC-KKKNCTYNQVQTRSADEPMTTFVLCNECGNRWK 386
>gi|313225202|emb|CBY20996.1| unnamed protein product [Oikopleura dioica]
Length = 295
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 79/180 (43%), Gaps = 27/180 (15%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITA---ESLMFEKWGHSFG-- 244
D R + RE L KAL VD +DK N P V++ A E ++ G+S
Sbjct: 131 DPVRNKSRELLQKALL-----VD---KDKFN---PQFVSLMAAKIEEAIYNFHGNSSSDT 179
Query: 245 TYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERA 304
Y K RS NL D +NPD R V+ G + P+ L M EEM S + L ++ KE
Sbjct: 180 KYRNKIRSRYSNLKDAKNPDLRDSVMTGVISPDKLASMKPEEMASKQLQELRKKFTKEAI 239
Query: 305 SDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
+D + G + + CG+C KK T + Q SA + C+ C W+
Sbjct: 240 NDHQMAQNEG-----TQTDMFSCGKCKSKKCT-YTQLQTRSADEPMTTFVYCMACGNRWK 293
>gi|348560474|ref|XP_003466038.1| PREDICTED: transcription elongation factor A protein 1-like [Cavia
porcellus]
Length = 425
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 11/144 (7%)
Query: 221 GCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALI 280
G D + E ++++ ++ Y+ + RS + NL D +NP+ R+ VL G++ P+
Sbjct: 259 GADEEELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFA 318
Query: 281 KMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGN 340
+M++EEM SD + + + + KE + + GG + + CG+C KK +
Sbjct: 319 RMTAEEMASDELKEMRKNLTKEAIREHQMAKTGG-----TQTDLFTCGKC-KKKNCTYTQ 372
Query: 341 DQNSSAKR-----IKCLNCYQYWE 359
Q SA + C C W+
Sbjct: 373 VQTRSADEPMTTFVVCNECGNRWK 396
>gi|74210421|dbj|BAE23395.1| unnamed protein product [Mus musculus]
Length = 273
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 76/174 (43%), Gaps = 9/174 (5%)
Query: 186 IKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGT 245
I C D R + RE L AL V V C+ + I E +F G++
Sbjct: 107 ITC-DAVRNKCREMLTLALQTDHDHVAVGV-----NCEHLSSQI--EECIFLDVGNADMK 158
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
Y+ + RS + NL D +NP RR VL G + P+ + M+SEEM SD + + + + KE
Sbjct: 159 YKNRVRSRISNLKDAKNPGLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIR 218
Query: 306 DRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKRIKCLNCYQYWE 359
+ + GG ++ + C + + +D+ + + C C W+
Sbjct: 219 EHQMARTGGTQTDLFTCNKCRKKNCTYTQVQTRSSDEPMTT-YVVCNECGNRWK 271
>gi|345793232|ref|XP_535071.3| PREDICTED: transcription elongation factor A protein 1 [Canis lupus
familiaris]
Length = 399
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 11/144 (7%)
Query: 221 GCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALI 280
G D + E ++++ ++ Y+ + RS + NL D +NP+ R+ VL G++ P+
Sbjct: 162 GADEEELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFA 221
Query: 281 KMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGN 340
+M++EEM SD + + + + KE + + GG + + CG+C KK +
Sbjct: 222 RMTAEEMASDELKEMRKNLTKEAIREHQMAKTGG-----TQTDLFTCGKC-KKKNCTYTQ 275
Query: 341 DQNSSAKR-----IKCLNCYQYWE 359
Q SA + C C W+
Sbjct: 276 VQTRSADEPMTTFVVCNECGNRWK 299
>gi|170579780|ref|XP_001894980.1| transcription elongation factor S-II (TFIIS) [Brugia malayi]
gi|158598237|gb|EDP36172.1| transcription elongation factor S-II (TFIIS), putative [Brugia
malayi]
Length = 305
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 63/142 (44%), Gaps = 11/142 (7%)
Query: 223 DPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKM 282
DP +AI E +FE + Y RS +FNL D +N R VL+G V PE M
Sbjct: 168 DPEELAIRTERKLFEVHRGTSEKYRAALRSRVFNLRDKKNLVLRENVLIGAVTPEKFAVM 227
Query: 283 SSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQ 342
+++EM SD + ++ K+ + + + G S + CG+CG K T + Q
Sbjct: 228 TADEMASDEMKAQREKFTKQAIEEYQMAVQEG-----TPSDMFKCGKCGKKNCT-YTQVQ 281
Query: 343 NSSAKR-----IKCLNCYQYWE 359
SA + C C W+
Sbjct: 282 TRSADEPMTTFVFCRECGNRWK 303
>gi|126342513|ref|XP_001362316.1| PREDICTED: transcription elongation factor A protein 1-like isoform
2 [Monodelphis domestica]
Length = 280
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 68/144 (47%), Gaps = 11/144 (7%)
Query: 221 GCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALI 280
G D + E ++++ ++ Y+ + RS + NL D +NP+ R+ VL G++ P+
Sbjct: 141 GADEEELGSQIEEAIYQELRNTDMKYKNRVRSRIANLKDAKNPNLRKNVLCGNIPPDLFA 200
Query: 281 KMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGN 340
++++EEM SD + + + + KE + + GG + + CG+C KK +
Sbjct: 201 RLTAEEMASDELKEMRKNLTKEAIREHQMAKTGG-----TQTDLFTCGKC-KKKNCTYTQ 254
Query: 341 DQNSSAKR-----IKCLNCYQYWE 359
Q SA + C C W+
Sbjct: 255 VQTRSADEPMTTFVVCNECGNRWK 278
>gi|321466977|gb|EFX77969.1| hypothetical protein DAPPUDRAFT_53771 [Daphnia pulex]
Length = 299
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 11/141 (7%)
Query: 224 PIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMS 283
P +A E +++++ ++ Y+ + RS + NL D NP+ R L G V P L M+
Sbjct: 163 PEYLAQMLEECIYKEFRNTDMKYKNRVRSRVSNLKDARNPNLRLNFLCGQVSPARLSNMT 222
Query: 284 SEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQN 343
SEEM SD + + Q+ KE +D L G + CG+CG + T + Q
Sbjct: 223 SEEMASDEMKNIRQKFTKESINDAQLATVQG-----TQTDLLKCGKCGKRNCT-YNQVQT 276
Query: 344 SSAKR-----IKCLNCYQYWE 359
SA + C C W+
Sbjct: 277 RSADEPMTTFVLCNACGNRWK 297
>gi|289742185|gb|ADD19840.1| transcription elongation factor tFIIS [Glossina morsitans
morsitans]
Length = 326
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 78/174 (44%), Gaps = 17/174 (9%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVK 249
D R + RE L AL +G++ E +P +AI E ++ ++ ++ Y+ +
Sbjct: 164 DAVRLKCREMLCNALK--TGDIPE------GWPEPEEMAIELEEAIYAEFRNTDMKYKNR 215
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYL 309
RS + NL DP+NP R + G + + L KM+ EEM SD ++L ++ KE +D L
Sbjct: 216 VRSRVANLKDPKNPTLRGNFMCGAITAQQLAKMTPEEMASDEMKKLREKFVKEAINDAQL 275
Query: 310 PWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSS----AKRIKCLNCYQYWE 359
G + CG+C + T + SS + C C W+
Sbjct: 276 ATVQGTKTDLLK-----CGKCKKRNCTYNQLQTRSSDEPMTTFVMCNECGHRWK 324
>gi|410966352|ref|XP_003989697.1| PREDICTED: transcription elongation factor A protein 3 [Felis
catus]
Length = 347
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 77/175 (44%), Gaps = 18/175 (10%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVK 249
D R++ E L AL + +++ +D CD ++A E ++++ + Y +
Sbjct: 184 DSVRDKCVEMLSAAL-----KAEDDYKDYGVNCD--KMASEIEDHIYQELKSTDMKYRNR 236
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYL 309
RS + NL DP NP RR VL G + + KM++EEM SD R L + +E + +
Sbjct: 237 VRSRISNLKDPRNPSLRRNVLSGAISAGLIAKMTAEEMASDELRELRNAMTQEAIREHQM 296
Query: 310 PWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
GG ++ C +C KK + Q SA + C C W+
Sbjct: 297 AKTGGTTTDLFQ-----CSKC-KKKNCTYNQVQTRSADEPMTTFVLCNECGNRWK 345
>gi|410929091|ref|XP_003977933.1| PREDICTED: transcription elongation factor A protein 2-like
[Takifugu rubripes]
Length = 284
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 79/160 (49%), Gaps = 15/160 (9%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLN-GCDPIRVAITAESLMFEKWGHSFGTYEV 248
D R + RE L AL + G D L G D +A E +++++ + Y+
Sbjct: 138 DNVRNKCRELLVAAL-QTGG-------DHLTMGVDCQHLAAQIEEEIYQEFKSTETKYKS 189
Query: 249 KYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRY 308
+ RS + NL D +NP+ RR VL G++ P+ + MS+EEM S +++ + + KE +
Sbjct: 190 RLRSRISNLKDQKNPELRRNVLCGNISPQRIASMSAEEMASAELKQIREALTKESIREHQ 249
Query: 309 LPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR 348
L GG + ++C C H K+ ++ + +++R
Sbjct: 250 LSKVGG-----TETDMFICNNC-HGKSCSYTQVETRASER 283
>gi|148682306|gb|EDL14253.1| transcription elongation factor A (SII) 1 [Mus musculus]
Length = 302
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
Y+ + RS + NL D +NP+ R+ VL G++ P+ +M++EEM SD + + + + KE
Sbjct: 188 YKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIR 247
Query: 306 DRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
+ + GG + + CG+C KK + Q SA + C C W+
Sbjct: 248 EHQMAKTGG-----TQTDLFTCGKC-KKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 300
>gi|440909134|gb|ELR59079.1| Transcription elongation factor A protein 1, partial [Bos grunniens
mutus]
Length = 289
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
Y+ + RS + NL D +NP+ R+ VL G++ P+ +M++EEM SD + + + + KE
Sbjct: 176 YKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIR 235
Query: 306 DRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
+ + GG + + CG+C KK + Q SA + C C W+
Sbjct: 236 EHQMAKTGG-----TQTDLFTCGKC-KKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 288
>gi|149060978|gb|EDM11588.1| rCG30435 [Rattus norvegicus]
Length = 302
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
Y+ + RS + NL D +NP+ R+ VL G++ P+ +M++EEM SD + + + + KE
Sbjct: 188 YKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIR 247
Query: 306 DRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
+ + GG + + CG+C KK + Q SA + C C W+
Sbjct: 248 EHQMAKTGG-----TQTDLFTCGKC-KKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 300
>gi|326525977|dbj|BAJ93165.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 236
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 107/224 (47%), Gaps = 20/224 (8%)
Query: 1 MEKEVME-LCEAAKRRAETAASAEGELEEAQ-CIAALDQLHKSSITCQLLVSTQLVRHLL 58
ME+E+ME A K A A+G EAQ C+ AL +L + + +LV+TQ+ + L
Sbjct: 3 MERELMETFEAAKKAADAAAEEADGSPPEAQRCLDALRRLREFRVNTDVLVATQVGKRLR 62
Query: 59 PLTKHPRQKIQDTASELILSWRSLFLEQMKGDEENGSFAICGEIKSANVEIAKGKRQITS 118
LTKHP IQ A++L W+ + +E+ ++NG+ A SA ++
Sbjct: 63 YLTKHPNSDIQAMAADLFGYWKKVVIEET--GKKNGTPANGKSDNSAAKADKPQPMKVEK 120
Query: 119 DEFEQALDVE------VVKVRRVDQKGAPRSKKLVGS-EFIVTEETNSLDNVDAEAIREE 171
+ + +E VK + + + +K GS + TE +S V E + +E
Sbjct: 121 NSVSAKVKIEKNSTSATVKTEKSSMSTSVKIEKKDGSIKVEKTENNDSKVQVKVEKVSKE 180
Query: 172 -------KPASAVV--PQKLVSMIKCNDYFRERIREKLYKALSK 206
K S+V P KL S+++CND R++ RE L +A S+
Sbjct: 181 VSRTPDTKKQSSVPNGPPKLTSLVRCNDAARDKYRELLVEASSR 224
>gi|410987185|ref|XP_003999887.1| PREDICTED: transcription elongation factor A protein 1 [Felis
catus]
Length = 353
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
Y+ + RS + NL D +NP+ R+ VL G++ P+ +M++EEM SD + + + + KE
Sbjct: 239 YKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIR 298
Query: 306 DRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
+ + GG + + CG+C KK + Q SA + C C W+
Sbjct: 299 EHQMAKTGG-----TQTDLFTCGKC-KKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 351
>gi|118791506|ref|XP_319787.3| AGAP009035-PA [Anopheles gambiae str. PEST]
gi|116117634|gb|EAA14772.3| AGAP009035-PA [Anopheles gambiae str. PEST]
Length = 315
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 77/176 (43%), Gaps = 20/176 (11%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCD-PIRVAITAESLMFEKWGHSFGTYEV 248
D R + RE L AL +V GE E GC P + E +F ++ ++ Y+
Sbjct: 152 DAVRLKCREMLANAL-RVDGEPPE-------GCQTPEELGEELEEAIFVEFKNTDMRYKN 203
Query: 249 KYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRY 308
+ RS + NL DP+NP R + G + + L KM+SEEM SD + L + KE +D
Sbjct: 204 RVRSRVANLKDPKNPSLRANFVSGAITAQRLAKMTSEEMASDEMKHLRDRFVKEAINDAQ 263
Query: 309 LPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
L G + CG+C K+ + Q SA + C C W+
Sbjct: 264 LATVQGTKTDLLK-----CGKC-KKRNCTYNQLQTRSADEPMTTFVMCNECGHRWK 313
>gi|405944776|pdb|2LW4|A Chain A, Solution Nmr Structure Of Human Transcription Elongation
Factor A Protein 2, Central Domain, Northeast Structural
Genomics Consortium (Nesg) Target Hr8682b
Length = 113
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVK 249
D R + RE L AL V G D R++ E +F G++ Y+ +
Sbjct: 10 DAVRNKCREMLTAALQTDHDHV-------AIGADCERLSAQIEECIFRDVGNTDMKYKNR 62
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSD 290
RS + NL D +NPD RR VL G + P+ + M+SEEM SD
Sbjct: 63 VRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASD 103
>gi|388854758|emb|CCF51651.1| related to transcription elongation factor TFIIS [Ustilago hordei]
Length = 317
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 77/177 (43%), Gaps = 17/177 (9%)
Query: 189 NDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGT--Y 246
ND R + LY++L E+++E Q N A+ E+ + G T Y
Sbjct: 150 NDKVRNACLKLLYQSL-----EINKE-QRGFNDSQVFDAAVAVEAAILANQGKGSVTADY 203
Query: 247 EVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASD 306
K RS+ N+ D NPD R +V+ + + L+ M++EE+ SD +R ++++ +
Sbjct: 204 RNKVRSLSLNIKDKNNPDLRVRVIERDIPADKLVTMTNEELASDKRKREIEELQMQN--- 260
Query: 307 RYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSS----AKRIKCLNCYQYWE 359
L G + + CGRC +KT + S+ + C NC W+
Sbjct: 261 --LFKAKGAAAQEAETDAFQCGRCKQRKTRYYQMQTRSADEPMTTFVTCTNCNHKWK 315
>gi|338721851|ref|XP_001504276.3| PREDICTED: hypothetical protein LOC100071603 [Equus caballus]
Length = 654
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%), Gaps = 18/178 (10%)
Query: 189 NDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEV 248
D R++ E L AL + +++ +D CD ++A E ++++ + Y
Sbjct: 389 GDSVRDKCVEMLSAAL-----KAEDDYKDYGVNCD--KMASEIEDHIYQELKSTDMKYRN 441
Query: 249 KYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRY 308
+ RS + NL DP NP RR VL G + + KM++EEM SD R L + +E +
Sbjct: 442 RVRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDELRELRNAMTQEAIREHQ 501
Query: 309 LPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWEST 361
+ GG ++ C +C KK + Q SA + C C W+ST
Sbjct: 502 MAKTGGTTTDLFQ-----CSKC-KKKNCTYNQVQTRSADEPMTTFVLCNECGNRWKST 553
>gi|343427400|emb|CBQ70927.1| related to transcription elongation factor TFIIS [Sporisorium
reilianum SRZ2]
Length = 319
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 75/179 (41%), Gaps = 21/179 (11%)
Query: 189 NDYFRERIREKLYKAL---SKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGT 245
ND R + LY +L G D ++ D VA+ A L + G
Sbjct: 152 NDKVRNACLKLLYNSLEIGKDAHGWSDSQIFDAA-------VAVEAAILANQGKGAVTTE 204
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
Y K RS+ N+ D NPD R +V+ + + L+ MS+EE+ SD +R +Q++ +
Sbjct: 205 YRNKVRSLSLNIKDKNNPDLRARVVERDIPADTLVTMSNEELASDKRKREIEQLQMQN-- 262
Query: 306 DRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
L G + + CGRC +K T + Q SA + C NC W+
Sbjct: 263 ---LFKAKGAAAQEAETDAFQCGRCKQRK-TRYYQMQTRSADEPMTTFVTCTNCNHKWK 317
>gi|220592|dbj|BAA00768.1| unnamed protein product [Mus musculus]
Length = 235
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 59/116 (50%), Gaps = 5/116 (4%)
Query: 221 GCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALI 280
G D + E ++++ ++ Y+ + RS + NL D +NP+ R+ VL G++ P+
Sbjct: 96 GADEEELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFA 155
Query: 281 KMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTT 336
+M++EEM SD + + + + KE + + GG + + CG+C K T
Sbjct: 156 RMTAEEMASDELKEMRKNLTKEAIREHQMAKTGG-----TQTDLFTCGKCKKKNCT 206
>gi|91833|pir||JX0167 transcription elongation factor S-II-related protein L121, hepatic
- mouse
Length = 235
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 59/116 (50%), Gaps = 5/116 (4%)
Query: 221 GCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALI 280
G D + E ++++ ++ Y+ + RS + NL D +NP+ R+ VL G++ P+
Sbjct: 96 GADEEELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFA 155
Query: 281 KMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTT 336
+M++EEM SD + + + + KE + + GG + + CG+C K T
Sbjct: 156 RMTAEEMASDELKEMRKNLTKEAIREHQMAKTGG-----TQTDLFTCGKCKKKNCT 206
>gi|121705046|ref|XP_001270786.1| transcription elongation factor S-II [Aspergillus clavatus NRRL 1]
gi|119398932|gb|EAW09360.1| transcription elongation factor S-II [Aspergillus clavatus NRRL 1]
Length = 304
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 61/137 (44%), Gaps = 12/137 (8%)
Query: 228 AITAESLMFEKWG-HSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEE 286
A E+ F G + Y K RS+ NL + NP R +VL V PE +KM+ +E
Sbjct: 172 ACAVEAAAFSALGPETKEQYRTKIRSLYQNLKNKSNPTLRTRVLANDVTPEQFVKMTYDE 231
Query: 287 MVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSA 346
+ S R +++I+KE + + ST CG+CG +K T + Q SA
Sbjct: 232 LKSAEQREQDRKIQKENMDKAMVAQAERSI-----STSLQCGKCGQRKVT-YTEAQTRSA 285
Query: 347 KR-----IKCLNCYQYW 358
C+NC + W
Sbjct: 286 DEPMTLFCTCMNCGKSW 302
>gi|281346348|gb|EFB21932.1| hypothetical protein PANDA_019839 [Ailuropoda melanoleuca]
Length = 264
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
Y+ + RS + NL D +NP+ R+ VL G++ P+ +M++EEM SD + + + + KE
Sbjct: 151 YKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIR 210
Query: 306 DRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
+ + GG + + CG+C KK + Q SA + C C W+
Sbjct: 211 EHQMAKTGG-----TQTDLFTCGKC-KKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 263
>gi|208968915|dbj|BAG74296.1| Transcription elongation factor A protein 1 [synthetic construct]
Length = 284
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 11/143 (7%)
Query: 221 GCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALI 280
G D + E ++++ ++ Y+ + RS + NL D +NP+ R+ VL G++ P+
Sbjct: 145 GADEEELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFA 204
Query: 281 KMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGN 340
+M++EEM SD + + + + KE + + GG + + CG+C KK +
Sbjct: 205 RMTAEEMASDELKEMWKNLTKEAIREHQMAKTGG-----TQTDLFTCGKC-KKKNCTYTQ 258
Query: 341 DQNSSAKR-----IKCLNCYQYW 358
Q SA + C C W
Sbjct: 259 VQTRSADEPVTTFVVCNECGNRW 281
>gi|417399424|gb|JAA46727.1| Putative transcription elongation factor a protein [Desmodus
rotundus]
Length = 350
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 8/170 (4%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVK 249
D R++ E L AL + D++ +D CD ++A E + ++ + Y +
Sbjct: 187 DSVRDKCVEMLSAAL-----KADDDYKDYGVNCD--KMASEIEDHIHQELKSTDMKYRNR 239
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYL 309
RS + NL DP NP RR VL G + + KM++EEM SD R L + +E + +
Sbjct: 240 VRSRISNLKDPRNPGLRRNVLSGAISTGLIAKMTAEEMASDELRELRNAMTQEAIREHQM 299
Query: 310 PWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKRIKCLNCYQYWE 359
GG ++ + C + + D+ + + C C W+
Sbjct: 300 AKTGGTTTDLFQCKKCKKKNCTYNQVQTRSADEPMTT-FVLCNECGNRWK 348
>gi|157817961|ref|NP_001102261.1| PHD finger protein 3 [Rattus norvegicus]
gi|149046439|gb|EDL99332.1| PHD finger protein 3 (predicted) [Rattus norvegicus]
Length = 2020
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 61/119 (51%), Gaps = 4/119 (3%)
Query: 171 EKPASAVVPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAIT 230
EK V P ++ D R+ +R L L K + + ++ ++ + +VA
Sbjct: 889 EKGGPNVHPPAAAAIKPSADQIRQSVRHSLKDILMKRLTDSNLKIPEEKSA----KVATK 944
Query: 231 AESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
E +F + + Y+ KYRS++FNL DP+N +KVL G V P+ LI+MS EE+ S
Sbjct: 945 IEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS 1003
>gi|225683287|gb|EEH21571.1| transcription elongation factor S-II [Paracoccidioides brasiliensis
Pb03]
gi|226288233|gb|EEH43745.1| transcription elongation factor S-II [Paracoccidioides brasiliensis
Pb18]
Length = 306
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 67/150 (44%), Gaps = 16/150 (10%)
Query: 219 LNGCDPIRVAITAESLMFEKWGHSFGT-----YEVKYRSILFNLMDPENPDFRRKVLLGH 273
LN +P RV + + + +FG Y K RS+ NL + NP R +VL
Sbjct: 161 LNSTEPPRVVLQKATEVEAAAYRAFGPETKEQYRTKMRSLFQNLKNKSNPGLRIRVLSNE 220
Query: 274 VKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHK 333
V E ++M+ +E+ SD R ++I+KE D+ + K ST CG+CG K
Sbjct: 221 VTAERFVRMTHDELKSDAQREEERRIQKENM-DKAMVAKAER----SISTSLQCGKCGQK 275
Query: 334 KTTNHGNDQNSSAKR-----IKCLNCYQYW 358
K T + Q SA C+ C + W
Sbjct: 276 KVT-YTEAQTRSADEPMTLFCTCVVCGKSW 304
>gi|148675493|gb|EDL07440.1| transcription elongation factor A (SII), 2 [Mus musculus]
Length = 298
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 77/180 (42%), Gaps = 22/180 (12%)
Query: 186 IKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESL------MFEKW 239
I C D R + RE L AL + D D + V + E L +F
Sbjct: 133 ITC-DAVRNKCREMLTLAL-----QTDH---------DHVAVGVNCEHLSSQIEDIFLDV 177
Query: 240 GHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQI 299
G++ Y+ + RS + NL D +NP RR VL G + P+ + M+SEEM SD + + + +
Sbjct: 178 GNTDMKYKNRVRSRISNLKDAKNPGLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAM 237
Query: 300 KKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKRIKCLNCYQYWE 359
KE + + GG ++ + C + + +D+ + + C C W+
Sbjct: 238 TKEAIREHQMARTGGTQTDLFTCNKCRKKNCTYTQVQTRSSDEPMTTY-VVCNECGNRWK 296
>gi|393904020|gb|EJD73631.1| transcription elongation factor S-II [Loa loa]
Length = 310
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 63/142 (44%), Gaps = 11/142 (7%)
Query: 223 DPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKM 282
DP +A+ E +FE + Y RS +FNL D +N R VL+G V PE M
Sbjct: 173 DPEELAVRTERKLFEVHRGTSEKYRAALRSRVFNLRDKKNLVLRENVLIGAVTPEKFAVM 232
Query: 283 SSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQ 342
+++EM SD + ++ K+ + + + G ++ CG+CG KK + Q
Sbjct: 233 TADEMASDEMKAQREKFTKQAIEEYQMAVQEGTPSDMFK-----CGKCG-KKNCTYTQVQ 286
Query: 343 NSSAKR-----IKCLNCYQYWE 359
SA + C C W+
Sbjct: 287 TRSADEPMTTFVFCRECGNRWK 308
>gi|355723564|gb|AES07932.1| transcription elongation factor A , 3 [Mustela putorius furo]
Length = 324
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 77/175 (44%), Gaps = 18/175 (10%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVK 249
D R++ E L AL + +++ +D CD ++A E ++++ + Y +
Sbjct: 162 DSVRDKCVEMLSAAL-----KAEDDYKDYGVNCD--KMASEIEDHIYQELKSTDMKYRNR 214
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYL 309
RS + NL DP NP RR VL G + + KM++EEM SD R L + +E + +
Sbjct: 215 VRSRISNLKDPRNPSLRRNVLSGAISAGLIAKMTAEEMASDELRELRNAMTQEAIREHQM 274
Query: 310 PWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
GG ++ C +C KK + Q SA + C C W+
Sbjct: 275 AKTGGTTTDLFQ-----CSKC-KKKNCTYNQVQTRSADEPMTTFVLCNECGNRWK 323
>gi|295672377|ref|XP_002796735.1| transcription elongation factor S-II [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226283715|gb|EEH39281.1| transcription elongation factor S-II [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 306
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 67/150 (44%), Gaps = 16/150 (10%)
Query: 219 LNGCDPIRVAITAESLMFEKWGHSFGT-----YEVKYRSILFNLMDPENPDFRRKVLLGH 273
LN +P RV + + + +FG Y K RS+ NL + NP R +VL
Sbjct: 161 LNSTEPPRVVLQKATEVEAAAYRAFGPETKEQYRTKMRSLFQNLKNKSNPGLRIRVLSNE 220
Query: 274 VKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHK 333
V E ++M+ +E+ SD R ++I+KE D+ + K ST CG+CG K
Sbjct: 221 VTAERFVRMTHDELKSDAQREEERRIQKENM-DKAMVAKAER----SISTSLQCGKCGQK 275
Query: 334 KTTNHGNDQNSSAKR-----IKCLNCYQYW 358
K T + Q SA C+ C + W
Sbjct: 276 KVT-YTEAQTRSADEPMTLFCTCVVCGKSW 304
>gi|341879127|gb|EGT35062.1| hypothetical protein CAEBREN_12817 [Caenorhabditis brenneri]
Length = 309
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 130/339 (38%), Gaps = 69/339 (20%)
Query: 31 CIAALDQLHKSSITCQLLVSTQLVRHLLPLTKHPRQKIQDTA-----SELILSWRSLFLE 85
CI LD+L K ++ +++ T + + + R+K+ D A +I W+
Sbjct: 28 CIKLLDELAKIPMSVEIIQKTNIGIKVNTM----RKKVSDEAIAKRAKNIIKEWK----- 78
Query: 86 QMKGDEENGSFAICGEIKSANVEIAKGKRQITSDEFEQALDVEVVKVRRVDQKGAPRS-K 144
N+ KGK Q D A K +R + AP+ K
Sbjct: 79 --------------------NIVDGKGKSQDDGDAPPPA------KKQRKESVEAPKPEK 112
Query: 145 KLVGSEFIVTEETNSLDNVDAEAIREEKPASAVVPQKLVSMIKCNDYFRERIREKLYKAL 204
K + + F E +N + V + ASA P K + ND R + + L AL
Sbjct: 113 KKLEAPFKRPEPSNRPEIV-------AQFASAAFPPKHLE----NDETRLKSAQLLLSAL 161
Query: 205 SKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPD 264
SGE+ + DP +A+ E + + Y RS +FNL D +N
Sbjct: 162 R--SGEMPQ------GTLDPEELAVQIEEKLHSVHRGTNKNYSAAVRSRIFNLRDKKNLA 213
Query: 265 FRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTR 324
R VL G V+ E M+SEEM S R + + KE + + + G S
Sbjct: 214 LRENVLTGVVRAEKFATMTSEEMASPEIRNMRDKFTKEAILEHQMSVQQG-----TPSDM 268
Query: 325 YMCGRCGHKKTTNHGNDQNSSAKRIK----CLNCYQYWE 359
+ CG+CG K T SS + + CL C W+
Sbjct: 269 FKCGKCGKKNCTYTQLQTRSSDEPMTTFVFCLECGNRWK 307
>gi|119492710|ref|XP_001263674.1| transcription elongation factor S-II [Neosartorya fischeri NRRL
181]
gi|119411834|gb|EAW21777.1| transcription elongation factor S-II [Neosartorya fischeri NRRL
181]
Length = 304
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 60/137 (43%), Gaps = 12/137 (8%)
Query: 228 AITAESLMFEKWG-HSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEE 286
A E+ F G + Y K RS+ NL + NP R +VL V PE +KMS +E
Sbjct: 172 ACAVEAAAFSALGPETKEQYRTKIRSLYQNLKNKSNPTLRVRVLSNEVTPEQFVKMSHDE 231
Query: 287 MVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSA 346
+ S R ++I+KE + + ST CG+CG +K T + Q SA
Sbjct: 232 LKSAEQREQERKIQKENMDKAMVAQAERSI-----STSLQCGKCGQRKVT-YTEAQTRSA 285
Query: 347 KR-----IKCLNCYQYW 358
C+NC + W
Sbjct: 286 DEPMTLFCTCMNCGKSW 302
>gi|345325225|ref|XP_001507346.2| PREDICTED: hypothetical protein LOC100075902 [Ornithorhynchus
anatinus]
Length = 604
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 79/182 (43%), Gaps = 17/182 (9%)
Query: 186 IKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGT 245
I C D R + RE L AL + + G D ++ E +++ ++
Sbjct: 199 ITC-DAVRNKCREMLTAALQTDNDHI-------AIGTDCEHLSAQIEEYIYQDVKNTDMK 250
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
Y+ + RS + NL D +NPD R+ VL G + PE + M+SEEM S+ + + + + KE
Sbjct: 251 YKNRVRSRISNLKDSKNPDLRKNVLCGAITPEQIAVMTSEEMASNELKEIRKAMTKEAIR 310
Query: 306 DRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSS----AKRIKCLNCYQYWEST 361
+ + GG + + CG+C K T SS + C C W++
Sbjct: 311 EHQMAKTGG-----TQTDLFTCGKCKKKNCTYTQVQTRSSDEPMTTFVVCNECGNRWKNR 365
Query: 362 TA 363
A
Sbjct: 366 MA 367
>gi|452001563|gb|EMD94022.1| hypothetical protein COCHEDRAFT_1201848 [Cochliobolus
heterostrophus C5]
Length = 306
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 75/165 (45%), Gaps = 20/165 (12%)
Query: 200 LYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMD 259
+Y L+ +S + +E+ + +A E+ + G Y+ K RS+ NL +
Sbjct: 155 MYDGLAFMSEAMPDEI---------LNIAKHVEAAAYSNAGSVNDAYKGKMRSLFQNLKN 205
Query: 260 PENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPI 319
NP R++VL G + + + M+ +EM SD R +++++KE + + +
Sbjct: 206 KSNPQLRKRVLTGEITAKRFVVMTHDEMKSDARRAEDEKLEKENMNQAMVAQVEKAI--- 262
Query: 320 YHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
S + CG+C KK + + Q SA +C+NC W+
Sbjct: 263 --SKEFQCGKCKQKKVS-YSQAQTRSADEPMTTFCECMNCGNRWK 304
>gi|380807497|gb|AFE75624.1| transcription elongation factor A protein 3, partial [Macaca
mulatta]
Length = 155
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 74/164 (45%), Gaps = 18/164 (10%)
Query: 173 PASAVVP---QKLVSMIKC---NDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIR 226
P+S + P + + C D R++ E L AL + D++ +D CD +
Sbjct: 3 PSSPLTPTFASSICLLAPCYLTGDSVRDKCVEMLSAAL-----KADDDYKDYGVNCD--K 55
Query: 227 VAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEE 286
+A E ++++ + Y + RS + NL DP NP RR VL G + + KM++EE
Sbjct: 56 MASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEE 115
Query: 287 MVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRC 330
M SD R L + +E + + GG ++ C +C
Sbjct: 116 MASDELRELRNAMTQEAIREHQMAKTGGTTTDLFQ-----CSKC 154
>gi|290462619|gb|ADD24357.1| Transcription elongation factor S-II [Lepeophtheirus salmonis]
Length = 291
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 82/193 (42%), Gaps = 24/193 (12%)
Query: 175 SAVVPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGC-DPIRVAITAES 233
S PQK + I D R R RE L AL + ++ + + C P +A E
Sbjct: 113 SKSFPQK--TNIATTDDVRLRCREMLTNALKGIGSDLPDGI------CKSPEELADLIEE 164
Query: 234 LMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSR 293
+F + + Y+ + RS +FNL D +NP R VL G ++P M+++EM S+
Sbjct: 165 AIFSNFKSTSAKYKNQIRSRVFNLKDKKNPALRENVLTGIIEPSKFAVMTADEMASN--- 221
Query: 294 RLNQQIKKERASDRYLPWKGGYLGPIYHSTRYM--CGRCGHKKTTNHGNDQNSSAKR--- 348
++KK+RA L I + + CG+C K+ + Q SA
Sbjct: 222 ----EVKKQRADFVKQGIDASQLAQIQGTKTDLLKCGKC-LKRNCTYNQIQTRSADEPMT 276
Query: 349 --IKCLNCYQYWE 359
+ C C W+
Sbjct: 277 TFVLCNECGNRWK 289
>gi|402588846|gb|EJW82779.1| hypothetical protein WUBG_06311 [Wuchereria bancrofti]
Length = 154
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 63/142 (44%), Gaps = 11/142 (7%)
Query: 223 DPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKM 282
DP +AI E +FE + Y RS +FNL D +N R VL+G V PE M
Sbjct: 17 DPEELAIRTERKLFEVHRGTSEKYRAALRSRVFNLRDKKNLVLRENVLIGAVTPEKFAVM 76
Query: 283 SSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQ 342
+++EM SD + ++ K+ + + + G S + CG+CG KK + Q
Sbjct: 77 TADEMASDEMKAQREKFTKQAIEEYQMAVQEG-----TPSDMFKCGKCG-KKNCTYTQVQ 130
Query: 343 NSSAKR-----IKCLNCYQYWE 359
SA + C C W+
Sbjct: 131 TRSADEPMTTFVFCRECGNRWK 152
>gi|189203175|ref|XP_001937923.1| transcription elongation factor S-II [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187985022|gb|EDU50510.1| transcription elongation factor S-II [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 306
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 74/165 (44%), Gaps = 20/165 (12%)
Query: 200 LYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMD 259
+Y L+ +S + +E+ + VA E+ + G Y+ K RS+ NL
Sbjct: 155 MYDGLAYMSEAMPDEI---------LLVAKQVEAAAYTNAGSVNDGYKAKMRSLFQNLKS 205
Query: 260 PENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPI 319
NP R++VL G V + + M+ +EM SD R L++++K E ++ + +
Sbjct: 206 KSNPALRKRVLTGEVPAKRFVTMTHDEMKSDERRALDEKLKAENMNEAMVAQVEKAI--- 262
Query: 320 YHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
S + C +C KK ++ Q SA +C+NC W+
Sbjct: 263 --SKEFQCSKC-KKKMVSYSQAQTRSADEPMTTFCECMNCGNRWK 304
>gi|451849746|gb|EMD63049.1| hypothetical protein COCSADRAFT_182336 [Cochliobolus sativus
ND90Pr]
Length = 306
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 75/165 (45%), Gaps = 20/165 (12%)
Query: 200 LYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMD 259
+Y L+ +S + +E+ + +A E+ + G Y+ K RS+ NL +
Sbjct: 155 MYDGLAFMSEAMPDEI---------LNIAKHVEAAAYSNAGSVNDAYKGKMRSLFQNLKN 205
Query: 260 PENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPI 319
NP R++VL G + + + M+ +EM SD R +++++KE + + +
Sbjct: 206 KSNPQLRKRVLTGEITAKRFVVMTHDEMKSDARRAEDEKLEKENMNQAMVAQVEKAI--- 262
Query: 320 YHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
S + CG+C KK + + Q SA +C+NC W+
Sbjct: 263 --SKEFQCGKCKQKKVS-YSQAQTRSADEPMTTFCECMNCGNRWK 304
>gi|432094693|gb|ELK26173.1| Transcription elongation factor A protein 1 [Myotis davidii]
Length = 376
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
Y+ + RS + NL D +NP+ R+ VL G++ P+ +M++EEM SD + + + + KE
Sbjct: 249 YKNRVRSRISNLKDAKNPNLRKNVLCGNISPDLFARMTAEEMASDELKEMRKNLTKEAIR 308
Query: 306 DRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
+ + GG + + CG+C KK + Q SA + C C W+
Sbjct: 309 EHQMAKTGG-----TQTDLFTCGKC-KKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 361
>gi|412991105|emb|CCO15950.1| predicted protein [Bathycoccus prasinos]
Length = 768
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 220 NGCDPIRVAITAESLMFEKWGHSFGT-YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEA 278
N +P +A+ E +FE+ G G Y V RS++FNL DP+NP R +VL +V E
Sbjct: 140 NALNPSEIAVGIERALFERCGRDTGKEYGVHARSLMFNLRDPQNPTLRARVLHENVSAET 199
Query: 279 LIKMSSEEMVS 289
L+KM+ E+ +
Sbjct: 200 LVKMTPAELAN 210
>gi|448079285|ref|XP_004194362.1| Piso0_004850 [Millerozyma farinosa CBS 7064]
gi|359375784|emb|CCE86366.1| Piso0_004850 [Millerozyma farinosa CBS 7064]
Length = 296
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 58/119 (48%), Gaps = 9/119 (7%)
Query: 245 TYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERA 304
+Y K R+ NL + +NPD R ++L G + PEA IKMS +M + L ++I E+
Sbjct: 181 SYRTKLRTFTMNLRNKKNPDLRDRLLSGKISPEAFIKMSPNDMAPEA---LKKEI--EKL 235
Query: 305 SDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKRI----KCLNCYQYWE 359
+ L G + R+ CG+C HK+ + + S+ + + C NC W+
Sbjct: 236 HKQNLFEAQGATEKRAVTDRFTCGKCKHKRVSYYQMQTRSADEPLTTFCTCENCGNRWK 294
>gi|410959484|ref|XP_003986338.1| PREDICTED: PHD finger protein 3 [Felis catus]
Length = 2211
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 59/119 (49%), Gaps = 4/119 (3%)
Query: 171 EKPASAVVPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAIT 230
EK V P + D R+ +R L L K E + +V ++ +VA
Sbjct: 1080 EKGVPNVHPPATSTSKPSADQIRQSVRHSLKDILMKRLTESNLKVPEEKAA----KVATK 1135
Query: 231 AESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
E +F + + Y+ KYRS++FNL DP+N +KVL G V P+ LI+MS EE+ S
Sbjct: 1136 IEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS 1194
>gi|358390984|gb|EHK40389.1| hypothetical protein TRIATDRAFT_302747 [Trichoderma atroviride IMI
206040]
Length = 305
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 63/142 (44%), Gaps = 11/142 (7%)
Query: 223 DPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKM 282
D I A+ E F Y+ K RS+ NL + N D ++V+ G + PE + M
Sbjct: 168 DVIARAVAVEHAAFTTLKGETPEYKKKIRSLFTNLKNKSNRDLGKQVMAGDISPEKFVNM 227
Query: 283 SSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQ 342
+ EE+ S+ R++ +++KE +P + S CG+C KK ++ Q
Sbjct: 228 TDEELKSEDQRKMELELEKENMKKAQVP-----MAEKSISDSLECGKC-KKKRVSYTQAQ 281
Query: 343 NSSAKR-----IKCLNCYQYWE 359
SA +C+NC W+
Sbjct: 282 TRSADEPMTTFCECMNCGNRWK 303
>gi|443894971|dbj|GAC72317.1| transcription elongation factor TFIIS [Pseudozyma antarctica T-34]
Length = 321
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 75/177 (42%), Gaps = 19/177 (10%)
Query: 190 DYFRERIREKLYKAL---SKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTY 246
D R + LY+AL + G D +V D VA+ A L + G Y
Sbjct: 155 DKVRNACLKLLYQALEIGKEQHGHSDSQVFDAA-------VAVEAAILANQGKGSVTADY 207
Query: 247 EVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASD 306
K RS+ N+ D NPD R +V+ + + L+ M++EE+ SD +R ++++ +
Sbjct: 208 RNKVRSLSLNIKDKNNPDLRVRVVERDIAADKLVTMTNEELASDKRKREIEELQMQN--- 264
Query: 307 RYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSS----AKRIKCLNCYQYWE 359
L G + + CGRC +KT + S+ + C NC W+
Sbjct: 265 --LFKAKGAAAQEAETDAFQCGRCKQRKTRYYQMQTRSADEPMTTFVTCTNCNHKWK 319
>gi|225719828|gb|ACO15760.1| Transcription elongation factor A protein 1 [Caligus clemensi]
Length = 296
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 83/189 (43%), Gaps = 25/189 (13%)
Query: 179 PQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGC-DPIRVAITAESLMFE 237
PQK + I D R R RE + AL K +G++ + + C P +A E +F
Sbjct: 123 PQK--ANINTTDDVRLRCREMITNAL-KGAGDLPDGI------CKSPEELADLIEESIFS 173
Query: 238 KWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQ 297
+ Y+ + RS +FNL D +NP R VL G ++P M+++EM SD
Sbjct: 174 SNKSTSAKYKNQIRSRVFNLRDKKNPALRENVLTGIIEPSKFAVMTADEMASD------- 226
Query: 298 QIKKERASDRYLPWKGGYLGPIYHSTRYM--CGRCGHKKTTNHGNDQNSSAKR-----IK 350
++KK+RA+ L I + + CG+CG T + Q SA +
Sbjct: 227 EVKKQRAAFVKQGIDASQLAQIQGTKTDLLKCGKCGKSDCT-YNQIQTRSADEPMTTFVL 285
Query: 351 CLNCYQYWE 359
C C W+
Sbjct: 286 CNACGNRWK 294
>gi|45387785|ref|NP_991246.1| transcription elongation factor A protein 3 [Danio rerio]
gi|41107560|gb|AAH65444.1| Transcription elongation factor A (SII), 3 [Danio rerio]
Length = 409
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 82/183 (44%), Gaps = 18/183 (9%)
Query: 182 LVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGH 241
L ++ D R++ E L AL D++ +D C+ + I E ++++
Sbjct: 238 LSPRLQTGDSIRDKCIEMLTAAL-----RTDDDYKDYGTNCEAMGAEI--EDYIYQETKA 290
Query: 242 SFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKK 301
+ Y+ + RS + NL DP+NP+ R+ VL G ++ + M++EEM SD ++L + +
Sbjct: 291 TDMKYKNRVRSRISNLKDPKNPNLRKNVLAGAIELSRIASMTAEEMASDELKQLRNVLTQ 350
Query: 302 ERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQ 356
E + + GG + CG+C KK + Q SA + C C
Sbjct: 351 EAIREHQMAKTGGTTTDLLQ-----CGKC-KKKNCTYNQVQTRSADEPMTTFVLCNECGN 404
Query: 357 YWE 359
W+
Sbjct: 405 RWK 407
>gi|426235318|ref|XP_004011631.1| PREDICTED: PHD finger protein 3 isoform 2 [Ovis aries]
Length = 1939
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 57/113 (50%), Gaps = 8/113 (7%)
Query: 177 VVPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMF 236
VP S + R +++ L K L+ + +V EE K VA E +F
Sbjct: 820 AVPASKPSADQIRQSVRHSLKDILMKRLTDSNLKVPEEKAAK--------VATKIEKELF 871
Query: 237 EKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
+ + Y+ KYRS++FNL DP+N +KVL G V P+ LI+MS EE+ S
Sbjct: 872 SFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS 924
>gi|448083875|ref|XP_004195463.1| Piso0_004850 [Millerozyma farinosa CBS 7064]
gi|359376885|emb|CCE85268.1| Piso0_004850 [Millerozyma farinosa CBS 7064]
Length = 296
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 58/119 (48%), Gaps = 9/119 (7%)
Query: 245 TYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERA 304
+Y K R+ NL + +NPD R ++L G + PEA IKMS +M + L ++I E+
Sbjct: 181 SYRTKLRTFTMNLRNKKNPDLRDRLLSGKISPEAFIKMSPNDMAPEA---LKKEI--EKL 235
Query: 305 SDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKRI----KCLNCYQYWE 359
+ L G + R+ CG+C HK+ + + S+ + + C NC W+
Sbjct: 236 HKQNLFEAQGATEKRAVTDRFTCGKCKHKRVSYYQMQTRSADEPLTTFCTCENCGNRWK 294
>gi|351701808|gb|EHB04727.1| Transcription elongation factor A protein 1, partial
[Heterocephalus glaber]
Length = 285
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
Y+ + RS + NL D +NP+ R+ VL G++ P+ +M++EEM SD + + + + +E
Sbjct: 172 YKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTREAIR 231
Query: 306 DRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
+ + GG + + CG+C KK + Q SA + C C W+
Sbjct: 232 EHQMAKTGG-----TQTDLFTCGKC-KKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 284
>gi|17536493|ref|NP_495941.1| Protein T24H10.1 [Caenorhabditis elegans]
gi|1729914|sp|P52652.1|TFS2_CAEEL RecName: Full=Putative transcription elongation factor S-II;
AltName: Full=TFIIS
gi|3880168|emb|CAA90943.1| Protein T24H10.1 [Caenorhabditis elegans]
Length = 308
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 61/141 (43%), Gaps = 9/141 (6%)
Query: 223 DPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKM 282
DP +A+ E ++ + +Y RS +FNL D +N R VL G V+ E M
Sbjct: 171 DPEELAVQIEEKLYSVHRDTNKSYSAAVRSRIFNLRDKKNLALRENVLTGVVRAEKFATM 230
Query: 283 SSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQ 342
+SEEM S R + + KE + + + G S + CG+CG K T
Sbjct: 231 TSEEMASAEIREMRDKFTKEAILEHQMSVQQG-----TPSDMFKCGKCGKKNCTYTQLQT 285
Query: 343 NSSAKRIK----CLNCYQYWE 359
SS + + CL C W+
Sbjct: 286 RSSDEPMTTFVFCLECGNRWK 306
>gi|195566922|ref|XP_002107024.1| GD17224 [Drosophila simulans]
gi|194204421|gb|EDX17997.1| GD17224 [Drosophila simulans]
Length = 141
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 8/143 (5%)
Query: 221 GC-DPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEAL 279
GC DP A E ++ + Y+ + RS L NL DP+NP R K L+G + P+ L
Sbjct: 4 GCGDPHDKAAQLEDAIYGELSSCQVKYKNRIRSRLANLRDPKNPGLREKFLVGLITPQEL 63
Query: 280 IKMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTN-H 338
+M+ EEM SD +++ QQ ++ + L G G + ++ C RC + T H
Sbjct: 64 SRMTPEEMASDDLKQMRQQYVQDSINAAQL---GNVEG--TKTNQFKCERCQKRNCTQLH 118
Query: 339 GNDQNSS-AKRIKCLNCYQYWES 360
D + + C +C W+S
Sbjct: 119 IRDGDEPIITFVMCDDCGNRWKS 141
>gi|308510188|ref|XP_003117277.1| hypothetical protein CRE_01901 [Caenorhabditis remanei]
gi|308242191|gb|EFO86143.1| hypothetical protein CRE_01901 [Caenorhabditis remanei]
Length = 308
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 60/141 (42%), Gaps = 9/141 (6%)
Query: 223 DPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKM 282
DP +A+ E ++ + Y RS +FNL D +N R VL G V+ E M
Sbjct: 171 DPEELAVQIEEKLYSVHRDTNKNYSAAVRSRIFNLRDKKNLALRENVLTGVVRAEKFATM 230
Query: 283 SSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQ 342
+SEEM S R + + KE + + + G S + CG+CG K T
Sbjct: 231 TSEEMASPEIRNMRDKFTKEAILEHQMSVQQG-----TPSDMFKCGKCGKKNCTYTQLQT 285
Query: 343 NSSAKRIK----CLNCYQYWE 359
SS + + CL C W+
Sbjct: 286 RSSDEPMTTFVFCLECGNRWK 306
>gi|426235316|ref|XP_004011630.1| PREDICTED: PHD finger protein 3 isoform 1 [Ovis aries]
Length = 2027
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 57/113 (50%), Gaps = 8/113 (7%)
Query: 177 VVPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMF 236
VP S + R +++ L K L+ + +V EE K VA E +F
Sbjct: 908 AVPASKPSADQIRQSVRHSLKDILMKRLTDSNLKVPEEKAAK--------VATKIEKELF 959
Query: 237 EKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
+ + Y+ KYRS++FNL DP+N +KVL G V P+ LI+MS EE+ S
Sbjct: 960 SFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS 1012
>gi|440911148|gb|ELR60861.1| PHD finger protein 3, partial [Bos grunniens mutus]
Length = 1943
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 57/113 (50%), Gaps = 8/113 (7%)
Query: 177 VVPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMF 236
VP S + R +++ L K L+ + +V EE K VA E +F
Sbjct: 827 AVPASKPSADQIRQSVRHSLKDILMKRLTDSNLKVPEEKAAK--------VATKIEKELF 878
Query: 237 EKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
+ + Y+ KYRS++FNL DP+N +KVL G V P+ LI+MS EE+ S
Sbjct: 879 SFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS 931
>gi|409075972|gb|EKM76347.1| hypothetical protein AGABI1DRAFT_45124 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 293
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 73/175 (41%), Gaps = 20/175 (11%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVK 249
D R++ E +Y AL S E + + G E + G + Y+ K
Sbjct: 132 DTTRDKCIELVYDALVNDSSAPVELILSRARG---------VEKCVHHDNGGTTAAYKQK 182
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYL 309
RS+ NL D NP FR V+ G V E L KM+SE+M S+ + +++IK+E
Sbjct: 183 IRSLFVNLKDKNNPGFRENVISGDVPVEKLAKMTSEDMASEERKAADRKIKEENLFKSLS 242
Query: 310 PWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
+ + + CGRC ++ + Q SA + C NC W+
Sbjct: 243 AAEQA-----AETDAFQCGRCKQRQ-CRYRQAQTRSADEPMTTFVTCTNCGNRWK 291
>gi|296484308|tpg|DAA26423.1| TPA: PHD finger protein 3 [Bos taurus]
Length = 2025
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 57/113 (50%), Gaps = 8/113 (7%)
Query: 177 VVPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMF 236
VP S + R +++ L K L+ + +V EE K VA E +F
Sbjct: 908 AVPASKPSADQIRQSVRHSLKDILMKRLTDSNLKVPEEKAAK--------VATKIEKELF 959
Query: 237 EKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
+ + Y+ KYRS++FNL DP+N +KVL G V P+ LI+MS EE+ S
Sbjct: 960 SFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS 1012
>gi|268532566|ref|XP_002631411.1| Hypothetical protein CBG03263 [Caenorhabditis briggsae]
Length = 305
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 61/141 (43%), Gaps = 9/141 (6%)
Query: 223 DPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKM 282
DP +A+ E ++ + Y RS +FNL D +N R VL G V+ E M
Sbjct: 168 DPEELAVQIEEKLYSVHRDTNKNYSAAVRSRIFNLRDKKNLALRENVLTGVVRAEKFATM 227
Query: 283 SSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQ 342
+SEEM S R + ++ KE + + + G S + CG+CG K T
Sbjct: 228 TSEEMASPEIREMREKFTKEAILEHQVSVQQG-----TPSDMFKCGKCGKKNCTYTQLQT 282
Query: 343 NSSAKRIK----CLNCYQYWE 359
SS + + CL C W+
Sbjct: 283 RSSDEPMTTFVFCLECGNRWK 303
>gi|54304003|emb|CAH59746.1| transcription elongation factor A protein 2 (SII) [Homo sapiens]
Length = 86
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%)
Query: 232 ESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDG 291
E +F G++ Y+ + RS + NL D +NPD RR VL G + P+ + M+SEEM SD
Sbjct: 4 EECIFRGVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDE 63
Query: 292 SRRLNQQIKKERASDRYLPWKGG 314
+ + + + KE + + GG
Sbjct: 64 LKEIRKAMTKEAIREHQMARTGG 86
>gi|300796758|ref|NP_001179500.1| PHD finger protein 3 [Bos taurus]
Length = 2025
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 57/113 (50%), Gaps = 8/113 (7%)
Query: 177 VVPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMF 236
VP S + R +++ L K L+ + +V EE K VA E +F
Sbjct: 908 AVPASKPSADQIRQSVRHSLKDILMKRLTDSNLKVPEEKAAK--------VATKIEKELF 959
Query: 237 EKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
+ + Y+ KYRS++FNL DP+N +KVL G V P+ LI+MS EE+ S
Sbjct: 960 SFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS 1012
>gi|50552628|ref|XP_503724.1| YALI0E09196p [Yarrowia lipolytica]
gi|49649593|emb|CAG79314.1| YALI0E09196p [Yarrowia lipolytica CLIB122]
Length = 295
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 64/132 (48%), Gaps = 9/132 (6%)
Query: 232 ESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDG 291
E+ +++ + G Y K RS+ NL DP+NP R V+ G + E L +MS +EM SD
Sbjct: 167 ENEVYKMENGTGGNYRPKMRSLYINLKDPKNPGLRGNVISGKISAERLCRMSPQEMASDE 226
Query: 292 SRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKRI-- 349
++ ++++K+ L G + R+ CG+C KK + + S+ + +
Sbjct: 227 LKKEIEEMEKQN-----LFAARGATEQRAVTDRFTCGKCKQKKVSYYQMQTRSADEPLTT 281
Query: 350 --KCLNCYQYWE 359
C NC W+
Sbjct: 282 FCTCENCGTRWK 293
>gi|426192898|gb|EKV42833.1| hypothetical protein AGABI2DRAFT_195610 [Agaricus bisporus var.
bisporus H97]
Length = 293
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 73/175 (41%), Gaps = 20/175 (11%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVK 249
D R++ E +Y AL S E + + G E + G + Y+ K
Sbjct: 132 DTTRDKCIELVYDALVNDSSAPVELILSRARG---------VEKCVHHDNGGTTAAYKQK 182
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYL 309
RS+ NL D NP FR V+ G V E L KM+SE+M S+ + +++IK+E
Sbjct: 183 IRSLFVNLKDKNNPGFRENVISGDVPVEKLAKMTSEDMASEERKAADRKIKEENLFKSLS 242
Query: 310 PWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
+ + + CGRC ++ + Q SA + C NC W+
Sbjct: 243 AAEQA-----AETDAFQCGRCKQRQ-CRYRQAQTRSADEPMTTFVTCTNCGNRWK 291
>gi|312088616|ref|XP_003145930.1| hypothetical protein LOAG_10358 [Loa loa]
Length = 241
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 63/142 (44%), Gaps = 11/142 (7%)
Query: 223 DPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKM 282
DP +A+ E +FE + Y RS +FNL D +N R VL+G V PE M
Sbjct: 104 DPEELAVRTERKLFEVHRGTSEKYRAALRSRVFNLRDKKNLVLRENVLIGAVTPEKFAVM 163
Query: 283 SSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQ 342
+++EM SD + ++ K+ + + + G ++ CG+CG KK + Q
Sbjct: 164 TADEMASDEMKAQREKFTKQAIEEYQMAVQEGTPSDMFK-----CGKCG-KKNCTYTQVQ 217
Query: 343 NSSAKR-----IKCLNCYQYWE 359
SA + C C W+
Sbjct: 218 TRSADEPMTTFVFCRECGNRWK 239
>gi|395833391|ref|XP_003789720.1| PREDICTED: PHD finger protein 3 isoform 2 [Otolemur garnettii]
Length = 1953
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 56/113 (49%), Gaps = 8/113 (7%)
Query: 177 VVPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMF 236
P S + R ++E L K L+ + +V EE K VA E +F
Sbjct: 831 AAPASKPSTDQIRQSVRHSLKEILMKRLTDSNLKVPEEKAAK--------VATKIEKELF 882
Query: 237 EKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
+ + Y+ KYRS++FNL DP+N +KVL G V P+ LI+MS EE+ S
Sbjct: 883 SFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS 935
>gi|336369371|gb|EGN97713.1| hypothetical protein SERLA73DRAFT_184533 [Serpula lacrymans var.
lacrymans S7.3]
gi|336382153|gb|EGO23304.1| hypothetical protein SERLADRAFT_472264 [Serpula lacrymans var.
lacrymans S7.9]
Length = 298
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 75/175 (42%), Gaps = 20/175 (11%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVK 249
D R++ E +Y AL+ SG E++ + A ES + ++ Y+ K
Sbjct: 137 DKTRDKCMELIYDALACDSGAPSEQILGR---------ARAIESAVVAQFSGPSVEYKSK 187
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYL 309
RS+ NL D NP R ++ G + E KMSS EM S+ + + +IK+ D +
Sbjct: 188 IRSLFVNLKDKNNPGLRESIVSGDLSVEKFGKMSSAEMASEERKAADNKIKE----DNFF 243
Query: 310 PWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
G + + CGRC +K + Q SA + C+NC W+
Sbjct: 244 KSLGAAEQEA-ETDAFQCGRCKQRK-CRYRQAQTRSADEPMTTFVTCVNCGNRWK 296
>gi|410905253|ref|XP_003966106.1| PREDICTED: transcription elongation factor A protein 3-like
[Takifugu rubripes]
Length = 502
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 84/197 (42%), Gaps = 19/197 (9%)
Query: 173 PASAVVPQ-KLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITA 231
P S + P L + D R++ E L AL D + ++ CD + I
Sbjct: 305 PTSPMSPGGALPPHLNTGDSVRDKCIEMLAAAL-----RTDNDYKEFGTNCDSMAAEI-- 357
Query: 232 ESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDG 291
E ++++ + Y+ + RS + NL DP+NP R+ VL G + + MS+EEM SD
Sbjct: 358 EDHIYQEIKATDMKYKNRVRSRISNLKDPKNPGLRKNVLAGTLALSRIASMSAEEMASDE 417
Query: 292 SRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR--- 348
++L + +E + + GG + CG+C KK + Q SA
Sbjct: 418 LKQLRNTLTQEAIREHQMAKTGGTSTDLLQ-----CGKC-KKKNCTYNQVQTRSADEPMT 471
Query: 349 --IKCLNCYQYWESTTA 363
+ C C W+ T+
Sbjct: 472 TFVLCNECGNRWKGITS 488
>gi|302658771|ref|XP_003021085.1| hypothetical protein TRV_04798 [Trichophyton verrucosum HKI 0517]
gi|291184964|gb|EFE40467.1| hypothetical protein TRV_04798 [Trichophyton verrucosum HKI 0517]
Length = 297
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 63/140 (45%), Gaps = 12/140 (8%)
Query: 225 IRVAITAESLMFEKWG-HSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMS 283
+R A E+ F+ +G S Y K RS+ NL + N R +VL V PE + M+
Sbjct: 162 LRKAAEVEAAAFKAFGPESKEVYRTKMRSLFQNLKNTSNLSLRTRVLTNEVTPERFVNMT 221
Query: 284 SEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQN 343
EE+ SD R +++I+KE + G I S CG+CG +K T + Q
Sbjct: 222 HEELKSDERREEDRKIQKENMDKAMV---GQPERSISKS--LQCGKCGQRKVT-YTEAQT 275
Query: 344 SSAKR-----IKCLNCYQYW 358
SA CL C + W
Sbjct: 276 RSADEPMTLFCTCLACGKSW 295
>gi|395534413|ref|XP_003769236.1| PREDICTED: PHD finger protein 3 [Sarcophilus harrisii]
Length = 2029
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 65/134 (48%), Gaps = 18/134 (13%)
Query: 156 ETNSLDNVDAEAIREEKPASAVVPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEV 215
E L NV A KP++ + Q + + +++ L K L+ + ++ EE
Sbjct: 896 EKTGLPNVHAPPTPASKPSADQIRQSV----------KHSLKDILMKRLTDSNLKIPEER 945
Query: 216 QDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVK 275
K VA E +F + + Y+ KYRS++FNL DP+N +KVL G V
Sbjct: 946 ASK--------VATKIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVT 997
Query: 276 PEALIKMSSEEMVS 289
P+ LI+MS EE+ S
Sbjct: 998 PDHLIRMSPEELAS 1011
>gi|344264752|ref|XP_003404454.1| PREDICTED: PHD finger protein 3 [Loxodonta africana]
Length = 2047
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 64/130 (49%), Gaps = 18/130 (13%)
Query: 160 LDNVDAEAIREEKPASAVVPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKL 219
+ NV A KP++ + Q + R +++ L K L+ + +V EE K
Sbjct: 912 VSNVHPPAASTSKPSADQIRQSV----------RHSLKDILMKRLTDSNLKVPEEKAAK- 960
Query: 220 NGCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEAL 279
VA E +F + + Y+ KYRS++FNL DP+N +KVL G V P+ L
Sbjct: 961 -------VATKIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNSILFKKVLKGEVTPDHL 1013
Query: 280 IKMSSEEMVS 289
I+MS EE+ S
Sbjct: 1014 IRMSPEELAS 1023
>gi|403268694|ref|XP_003926404.1| PREDICTED: PHD finger protein 3 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 1951
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 60/117 (51%), Gaps = 12/117 (10%)
Query: 173 PASAVVPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAE 232
PASA P S + R +++ L K L+ + +V EE K VA E
Sbjct: 827 PASASKP----SADQIRQSVRHSLKDILMKRLTDSNLKVPEEKAAK--------VATKIE 874
Query: 233 SLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
++ + + Y+ KYRS++FNL DP+N +KVL G V P+ LI+MS EE+ S
Sbjct: 875 KELYSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS 931
>gi|395833389|ref|XP_003789719.1| PREDICTED: PHD finger protein 3 isoform 1 [Otolemur garnettii]
Length = 2041
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 56/114 (49%), Gaps = 8/114 (7%)
Query: 176 AVVPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLM 235
P S + R ++E L K L+ + +V EE K VA E +
Sbjct: 918 PAAPASKPSTDQIRQSVRHSLKEILMKRLTDSNLKVPEEKAAK--------VATKIEKEL 969
Query: 236 FEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
F + + Y+ KYRS++FNL DP+N +KVL G V P+ LI+MS EE+ S
Sbjct: 970 FSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS 1023
>gi|170036779|ref|XP_001846239.1| transcription elongation factor S-II [Culex quinquefasciatus]
gi|167879682|gb|EDS43065.1| transcription elongation factor S-II [Culex quinquefasciatus]
Length = 292
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 84/196 (42%), Gaps = 23/196 (11%)
Query: 170 EEKPASAVVPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDP-IRVA 228
++K A + PQ+ + D R + RE L AL +V GE E GC P +
Sbjct: 112 DKKRARSRSPQRASNTT---DTVRLKCREMLAHAL-QVEGEQPE-------GCQPPEELG 160
Query: 229 ITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMV 288
E +F + ++ Y+ + RS + NL DP+NP R + G + E L KM+ EEM
Sbjct: 161 EELEEAIFAEIKNTDFRYKNRVRSRVANLKDPKNPSLRANFVSGAITAERLAKMTPEEMA 220
Query: 289 SDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR 348
SD + L + KE +D L G + CG+C K+ + Q SA
Sbjct: 221 SDEMKNLRDRFVKEAINDAQLATNQGTKTDLLK-----CGKC-KKRNCTYNQLQTRSADE 274
Query: 349 -----IKCLNCYQYWE 359
+ C C W+
Sbjct: 275 PMTTFVLCNECGNRWK 290
>gi|296198509|ref|XP_002746743.1| PREDICTED: PHD finger protein 3 isoform 2 [Callithrix jacchus]
Length = 1951
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 60/117 (51%), Gaps = 12/117 (10%)
Query: 173 PASAVVPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAE 232
PASA P S + R +++ L K L+ + +V EE K VA E
Sbjct: 827 PASASKP----SADQIRQSVRHSLKDILMKRLTDSNLKVPEEKAAK--------VATKIE 874
Query: 233 SLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
++ + + Y+ KYRS++FNL DP+N +KVL G V P+ LI+MS EE+ S
Sbjct: 875 KELYSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS 931
>gi|348570796|ref|XP_003471183.1| PREDICTED: zinc finger protein 436-like [Cavia porcellus]
Length = 856
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 94/223 (42%), Gaps = 26/223 (11%)
Query: 155 EETNSLDNVDAEAIREEKPASAVVPQKLVS---MIKC---NDYFRERIREKLYKALSKVS 208
E +NS AE + P+S + P S + C D R++ E L AL
Sbjct: 151 ERSNSSSKSKAETPK--TPSSPLTPTFAPSVCLLAPCYLTGDSVRDKCVEMLAAAL---- 204
Query: 209 GEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRK 268
+ +++ +D CD ++A E ++++ + Y + RS + NL DP NP RR
Sbjct: 205 -KAEDDYKDYGVNCD--KMASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRN 261
Query: 269 VLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCG 328
VL G + + KM++EEM SD R L + +E + + GG + C
Sbjct: 262 VLSGAISSGLIAKMTAEEMASDELRELRNAMTQEAIREHQMAKTGGTTTDL-----LQCS 316
Query: 329 RCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWESTTALYG 366
+C KK + Q SA + C C W+ + + G
Sbjct: 317 KCK-KKNCTYNQMQTRSADEPMTTFVLCNECGHRWKVMSLIPG 358
>gi|296198507|ref|XP_002746742.1| PREDICTED: PHD finger protein 3 isoform 1 [Callithrix jacchus]
Length = 2039
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 60/117 (51%), Gaps = 12/117 (10%)
Query: 173 PASAVVPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAE 232
PASA P S + R +++ L K L+ + +V EE K VA E
Sbjct: 915 PASASKP----SADQIRQSVRHSLKDILMKRLTDSNLKVPEEKAAK--------VATKIE 962
Query: 233 SLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
++ + + Y+ KYRS++FNL DP+N +KVL G V P+ LI+MS EE+ S
Sbjct: 963 KELYSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS 1019
>gi|350585852|ref|XP_003482063.1| PREDICTED: SPOC domain-containing protein 1-like [Sus scrofa]
Length = 1288
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 43/75 (57%)
Query: 227 VAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEE 286
+A E+ +F+ + G Y KYRS+LFNL DP NPD KV+ G V P+ L++M+S +
Sbjct: 625 LAAGIEAALFDLTHATNGHYRTKYRSLLFNLRDPRNPDLFLKVIHGDVTPQGLVRMNSVQ 684
Query: 287 MVSDGSRRLNQQIKK 301
+ R Q +K
Sbjct: 685 LAPQELARWRDQEEK 699
>gi|407929237|gb|EKG22072.1| Zinc finger TFIIS-type protein [Macrophomina phaseolina MS6]
Length = 302
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
Y+ + RS+ NL + NP R++VL G ++PE + MSSEE++S R ++++KE +
Sbjct: 188 YKERMRSLFQNLKNKSNPGLRKRVLAGEIRPEKFVTMSSEELMSAERRAEAERLEKENMN 247
Query: 306 DRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
+ + ST CG+CG KK + + Q SA +C C W+
Sbjct: 248 KAMVAQAERSI-----STSLTCGKCGQKKVS-YSQAQTRSADEPMTTFCECTVCGNRWK 300
>gi|58268784|ref|XP_571548.1| positive transcription elongation factor [Cryptococcus neoformans
var. neoformans JEC21]
gi|134113304|ref|XP_774677.1| hypothetical protein CNBF3560 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257321|gb|EAL20030.1| hypothetical protein CNBF3560 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227783|gb|AAW44241.1| positive transcription elongation factor, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 349
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 48/92 (52%), Gaps = 7/92 (7%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
Y K RS+ NL D NP R +++LG+V E + MS +EM S+ R L ++I AS
Sbjct: 238 YRAKMRSLFLNLKDKGNPALRNEIVLGYVSTEKVASMSKDEMASESVRMLKEKI----AS 293
Query: 306 DRYLPWKGGYLGPIYHST-RYMCGRCGHKKTT 336
D +K +G T + CGRC +K T
Sbjct: 294 DNL--FKAKAVGVTQAETDAFKCGRCHQRKCT 323
>gi|321260424|ref|XP_003194932.1| positive transcription elongation factor [Cryptococcus gattii
WM276]
gi|317461404|gb|ADV23145.1| positive transcription elongation factor, putative [Cryptococcus
gattii WM276]
Length = 333
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 73/148 (49%), Gaps = 23/148 (15%)
Query: 202 KALSKVSGEVDEEVQDKLNGC-----DPIRVAITAE-SLMFEKWGH---SFGT---YEVK 249
KA S G VD V+DK C D + + TAE ++ E+ + +F T Y K
Sbjct: 173 KADSSEGGSVDS-VRDK---CVVMIYDALALDSTAERAIGIERAANKSMNFSTGNDYRAK 228
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYL 309
RS+ NL D NP R +++LG++ E + MS +EM S+ R L ++I ASD
Sbjct: 229 MRSLFLNLKDKGNPALRNEIVLGYISTEKVASMSKDEMASESVRMLKEKI----ASDNL- 283
Query: 310 PWKGGYLGPIYHST-RYMCGRCGHKKTT 336
+K +G T + CGRC +K T
Sbjct: 284 -FKAKAVGVTQAETDAFKCGRCHQRKCT 310
>gi|403268692|ref|XP_003926403.1| PREDICTED: PHD finger protein 3 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 2039
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 60/117 (51%), Gaps = 12/117 (10%)
Query: 173 PASAVVPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAE 232
PASA P S + R +++ L K L+ + +V EE K VA E
Sbjct: 915 PASASKP----SADQIRQSVRHSLKDILMKRLTDSNLKVPEEKAAK--------VATKIE 962
Query: 233 SLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
++ + + Y+ KYRS++FNL DP+N +KVL G V P+ LI+MS EE+ S
Sbjct: 963 KELYSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS 1019
>gi|410966896|ref|XP_003989963.1| PREDICTED: SPOC domain-containing protein 1 [Felis catus]
Length = 1178
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 38/62 (61%)
Query: 227 VAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEE 286
+A E+ +F+ + Y+ KYRS+LFNL DP NPD KVL G V P L++MSS +
Sbjct: 602 IAADIEAALFDLTQATNCRYKTKYRSLLFNLRDPRNPDLFLKVLQGDVTPHGLVRMSSTQ 661
Query: 287 MV 288
+
Sbjct: 662 LA 663
>gi|313221451|emb|CBY32201.1| unnamed protein product [Oikopleura dioica]
Length = 295
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 79/180 (43%), Gaps = 27/180 (15%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITA---ESLMFEKWGHSFG-- 244
D R + RE L KAL VD +DK + P V++ A E ++ G+S
Sbjct: 131 DPVRNKSRELLQKALL-----VD---KDKFS---PQFVSLMAAKIEEAIYNFHGNSSSDT 179
Query: 245 TYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERA 304
Y K RS NL D +NPD R V+ G + P+ L M EEM S + L ++ KE
Sbjct: 180 KYRNKIRSRYSNLKDAKNPDLRDSVMTGVISPDKLASMKPEEMASKQLQELRKKFTKEAI 239
Query: 305 SDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
+D + G + + CG+C KK T + Q SA + C+ C W+
Sbjct: 240 NDHQMAQNEG-----TQTDMFSCGKCKSKKCT-YTQLQTRSADEPMTTFVYCMACGNRWK 293
>gi|426236089|ref|XP_004012007.1| PREDICTED: transcription elongation factor A protein 1 [Ovis aries]
Length = 313
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
Y+ + +S + NL D +NP+ R+ VL G++ P+ +M++EEM SD + + + + KE
Sbjct: 199 YKNRIQSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIR 258
Query: 306 DRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
+ + GG + + CG+C KK + Q SA + C C W+
Sbjct: 259 EHQMAKTGG-----TQTDLFTCGKC-KKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 311
>gi|313223|emb|CAA51940.1| transcription elongation factor [Homo sapiens]
Length = 301
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 67/144 (46%), Gaps = 11/144 (7%)
Query: 221 GCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALI 280
G D + E ++++ ++ Y+ + RS + NL D +NP R+ VL G++ P+
Sbjct: 162 GADEEELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPYLRKNVLCGNIPPDLFA 221
Query: 281 KMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGN 340
+M++EEM SD + + + + KE + + GG + + CG+C KK +
Sbjct: 222 RMTAEEMASDELKEMWKNLTKEAIREHQMAKTGG-----TQTDLFTCGKC-KKKNCTYTQ 275
Query: 341 DQNSSAKR-----IKCLNCYQYWE 359
Q SA + C C W+
Sbjct: 276 VQTRSADEPVTTFVVCNECGNRWK 299
>gi|449544753|gb|EMD35725.1| hypothetical protein CERSUDRAFT_115683 [Ceriporiopsis subvermispora
B]
Length = 306
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 74/175 (42%), Gaps = 20/175 (11%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVK 249
D R++ E +Y AL+ SG E++ + A ES + ++ + Y+ K
Sbjct: 145 DKTRDKCAELIYDALAFDSGAPSEQI---------LSRAKAIESTVLSQFNGTNAEYKAK 195
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYL 309
RS+ NL D NP R V+ G + + KMSS+EM S+ + + +I +E L
Sbjct: 196 IRSLFVNLKDKNNPSLRESVVAGDLPVQRFCKMSSQEMASEERKAADNRIMEEN-----L 250
Query: 310 PWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
G + + CGRC +K + Q SA + C C W+
Sbjct: 251 FKSLGAEEVQAETDAFQCGRCKQRK-CRYRQAQTRSADEPMTTFVTCTVCNNRWK 304
>gi|3347834|gb|AAC64679.1| transcription elongation factor S-II [Xenopus laevis]
Length = 289
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 79/175 (45%), Gaps = 18/175 (10%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVK 249
D R++ E + AL + D++ + C+ R+A E ++ + + Y +
Sbjct: 126 DSVRDKCVEMVASAL-----KTDDDYKQFGTNCE--RLAWEIEECIYSEVKVTDMKYRNR 178
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYL 309
RS + NL DP+NP+ R+ VL G V P+++ M++EEM SD R L + +E + +
Sbjct: 179 IRSRISNLKDPKNPNLRKNVLCGVVTPQSIATMTAEEMASDELRELRNTMTQEAIREHQM 238
Query: 310 PWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
GG + C +C KK ++ Q SA + C C W+
Sbjct: 239 AKTGGTQTDLLQ-----CEKC-KKKNCSYNQVQTRSADEPMTTFVLCNECGNRWK 287
>gi|67968616|dbj|BAE00667.1| unnamed protein product [Macaca fascicularis]
Length = 117
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 5/91 (5%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
Y+ + RS + NL D +NP+ R+ VL G++ P+ +M++EEM SD + + + + KE
Sbjct: 3 YKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIR 62
Query: 306 DRYLPWKGGYLGPIYHSTRYMCGRCGHKKTT 336
+ + GG + + CG+C K T
Sbjct: 63 EHQMAKTGG-----TQTDLFTCGKCKKKNCT 88
>gi|195355349|ref|XP_002044154.1| GM22558 [Drosophila sechellia]
gi|194129443|gb|EDW51486.1| GM22558 [Drosophila sechellia]
Length = 162
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 77/171 (45%), Gaps = 17/171 (9%)
Query: 193 RERIREKLYKALSKVSGEVDEEVQDKLNGC-DPIRVAITAESLMFEKWGHSFGTYEVKYR 251
R + RE L AL SG + GC DP A E ++ + Y+ + R
Sbjct: 6 RMKCREMLAAALK--SGPMPP-------GCGDPHDKAAQLEDAIYGELSSCQVKYKNRIR 56
Query: 252 SILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYLPW 311
S L NL DP+NP R K L+G + P+ L +M+ EEM SD +++ QQ ++ + L
Sbjct: 57 SRLANLRDPKNPGLREKFLVGLITPQELSRMTPEEMASDDLKQMRQQYVQDSINAAQL-- 114
Query: 312 KGGYLGPIYHSTRYMCGRCGHKKTTN-HGNDQNSS-AKRIKCLNCYQYWES 360
G G + + C RC + T H D + + C +C W+S
Sbjct: 115 -GNVEG--TKTNLFKCERCQKRNCTQLHIRDGDEPLITFVMCDDCGNRWKS 162
>gi|432908156|ref|XP_004077781.1| PREDICTED: transcription elongation factor A protein 3-like
[Oryzias latipes]
Length = 520
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 84/190 (44%), Gaps = 22/190 (11%)
Query: 174 ASAVVPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAES 233
A ++P L + D R++ E L AL D++ ++ CD + I E
Sbjct: 345 AGGLLPPHLAT----GDSIRDKCIEMLAAAL-----RTDDDHKEFGVNCDSMGAEI--ED 393
Query: 234 LMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSR 293
++++ + Y+ + RS + NL DP+NP RR VL G ++ + MS+EEM SD +
Sbjct: 394 YIYQEIKATDMKYKNRVRSRISNLKDPKNPGLRRNVLAGSIELSRIASMSAEEMASDELK 453
Query: 294 RLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR----- 348
+L + +E + + GG + CG+C +KK + Q SA
Sbjct: 454 QLRNVLTQEAIREHQMAKTGGTTTDLLQ-----CGKC-NKKNCTYNQVQTRSADEPMTTF 507
Query: 349 IKCLNCYQYW 358
+ C C W
Sbjct: 508 VLCNECGYRW 517
>gi|401395411|ref|XP_003879596.1| putative transcription elongation factor TFIIS [Neospora caninum
Liverpool]
gi|325114003|emb|CBZ49561.1| putative transcription elongation factor TFIIS [Neospora caninum
Liverpool]
Length = 418
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 136/345 (39%), Gaps = 56/345 (16%)
Query: 32 IAALDQLHKSSITCQLLVSTQLVRHLLPLTKHPRQKIQDTASELILSWRSLFLEQMKGDE 91
+ AL L + +T +LL T++ + L HP +I+ ++L+ W++ + +
Sbjct: 112 VEALTILDRVDMTRELLAKTRIGVSVGKLRTHPDVQIRSRCTQLVHKWKA-GISGSCSTK 170
Query: 92 ENGSFAICGEIKSANVEIAKGKRQITSDEFEQALDVEVVKVRRVDQKGAPRSKKLVGSEF 151
++G+ + G+ S +GK + ++A D + G + G+
Sbjct: 171 DSGTLSRPGQNGSG-----QGKSHTGTSANDKATD---------KKHGLSSQPSVQGNGV 216
Query: 152 IVTEETNSLDNVDAEAIREEKPASAVVPQKLVSMIKCNDYFRERIREKLYKALSKVSGEV 211
+ + + A PAS D R+R R L++AL V
Sbjct: 217 QGVPGDKAPEKISTSAEDYPGPASG-------------DAVRDRARGFLWRAL------V 257
Query: 212 DEEVQDKLNGCD----PIRVAITAESLMFEKWG---HSFGTYEVKYRSILFNLMDPENPD 264
D + G D RVA E +++++ S Y ++ +++ +N D +NPD
Sbjct: 258 DGMQSGRDLGADRSGETARVAAEIEKALWQEYCVKRKSTKEYNMQLKTLKWNFADQKNPD 317
Query: 265 FRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYLPW------KGGYLGP 318
KVL G PE L M+S ++ SD +R+ + KKE W +GG G
Sbjct: 318 LNLKVLCGVYTPEQLATMNSADLASDEKKRMRELQKKESMEACQSDWEMKKLMEGGTDG- 376
Query: 319 IYHSTRYMCGRCGHKKTTNHGNDQNSS----AKRIKCLNCYQYWE 359
++ C +C KT SS + CL C W+
Sbjct: 377 ----GQFPCFKCRTTKTVYFQMQTRSSDEPMTTFVTCLECGNRWK 417
>gi|301754936|ref|XP_002913385.1| PREDICTED: transcription elongation factor A protein 3-like
[Ailuropoda melanoleuca]
Length = 492
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 84/198 (42%), Gaps = 24/198 (12%)
Query: 173 PASAVVPQKLVS---MIKC---NDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIR 226
P S + P S + C D R++ E L AL + +++ +D CD +
Sbjct: 306 PGSPLTPTFAPSVCLLAPCYLTGDSVRDKCVEMLSAAL-----KAEDDYKDYGVNCD--K 358
Query: 227 VAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEE 286
+A E ++++ + Y + RS + NL DP NP RR VL G + + KM++EE
Sbjct: 359 MASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPSLRRNVLSGTISAGLIAKMTAEE 418
Query: 287 MVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSA 346
M SD R L + +E + + GG ++ C +C KK + Q SA
Sbjct: 419 MASDELRELRNAMTQEAIREHQMAKTGGTTTDLFQ-----CSKC-KKKNCTYNQVQTRSA 472
Query: 347 KR-----IKCLNCYQYWE 359
+ C C W+
Sbjct: 473 DEPMTTFVLCNECGNRWK 490
>gi|157119415|ref|XP_001653370.1| transcription elongation factor s-ii [Aedes aegypti]
gi|108883153|gb|EAT47378.1| AAEL001496-PA [Aedes aegypti]
Length = 303
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 76/175 (43%), Gaps = 18/175 (10%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGC-DPIRVAITAESLMFEKWGHSFGTYEV 248
D R + RE L AL +V GE E GC P +A E ++ ++ ++ Y+
Sbjct: 140 DAVRLKCREMLTNAL-RVDGEQPE-------GCQSPEELADELEEAIYVEFKNTDMKYKN 191
Query: 249 KYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRY 308
+ RS + NL DP+NP R + G + + L KM+ EEM SD + L + KE +D
Sbjct: 192 RVRSRVANLKDPKNPSLRSNFVSGAITAQRLAKMTPEEMASDEMKNLRDRFVKEAINDAQ 251
Query: 309 LPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSS----AKRIKCLNCYQYWE 359
L G + CG+C + T + SS + C C W+
Sbjct: 252 LATNQGTKTDLLK-----CGKCKKRNCTYNQLQTRSSDEPMTTFVLCNECGHRWK 301
>gi|260949205|ref|XP_002618899.1| hypothetical protein CLUG_00058 [Clavispora lusitaniae ATCC 42720]
gi|238846471|gb|EEQ35935.1| hypothetical protein CLUG_00058 [Clavispora lusitaniae ATCC 42720]
Length = 309
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 68/140 (48%), Gaps = 10/140 (7%)
Query: 225 IRVAITAESLMFE-KWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMS 283
+R+A ES +F+ ++ + Y + R+ NL + +NP+ R ++L G + P + IKM+
Sbjct: 173 LRIATEIESEVFKSEYSNVNDNYRNRLRTFTMNLRNKKNPELRARLLSGQITPSSFIKMT 232
Query: 284 SEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQN 343
EM + ++ +++ K+ D G + R+ CG+C HKK + +
Sbjct: 233 PNEMAPEALKKEIEKLHKQNLFD-----AQGATEKRAVTDRFTCGKCKHKKVSYYQMQTR 287
Query: 344 SSAKRI----KCLNCYQYWE 359
S+ + + C NC W+
Sbjct: 288 SADEPLTTFCTCENCGNRWK 307
>gi|340517178|gb|EGR47423.1| predicted protein [Trichoderma reesei QM6a]
Length = 309
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 64/140 (45%), Gaps = 11/140 (7%)
Query: 225 IRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSS 284
I A+ E+ + + Y+ K RS+ NL + N D ++V+ G + PE + M+
Sbjct: 174 IAKAVAVENAAYTVFNGEGAEYKKKIRSLFANLKNKSNRDLGKRVMSGDIAPERFVSMTD 233
Query: 285 EEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNS 344
E++ S+ RR+ +++KE +P + S CG+C KK ++ Q
Sbjct: 234 EDLKSEDQRRMELELEKENMKKAQVP-----MAEKSISDSLECGKC-KKKRVSYTQAQTR 287
Query: 345 SAKR-----IKCLNCYQYWE 359
SA +C+NC W+
Sbjct: 288 SADEPMTTFCECMNCGNRWK 307
>gi|241948245|ref|XP_002416845.1| DNA strand transfer protein alpha, putative; dna strand transferase
1, putative; pyrimidine pathway regulatory protein 2,
putative; transcription elongation factor SII, putative
[Candida dubliniensis CD36]
gi|223640183|emb|CAX44432.1| DNA strand transfer protein alpha, putative [Candida dubliniensis
CD36]
Length = 303
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 67/140 (47%), Gaps = 10/140 (7%)
Query: 225 IRVAITAESLMFE-KWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMS 283
+R+AI ES +++ ++ +Y K RS NL + +NP+ R ++L + P IKMS
Sbjct: 167 LRIAIEIESEVYKNEYSKISDSYRNKLRSFTMNLRNKKNPELRERILSKQILPAEFIKMS 226
Query: 284 SEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQN 343
EM + ++ +++ K+ D G + R+ CG+C HKK + +
Sbjct: 227 PNEMAPEALKKEIEKLHKQNLFD-----AQGATEKRAVTDRFTCGKCKHKKVSYYQMQTR 281
Query: 344 SSAKRI----KCLNCYQYWE 359
S+ + + C NC W+
Sbjct: 282 SADEPLTTFCTCENCGNRWK 301
>gi|73973196|ref|XP_538985.2| PREDICTED: PHD finger protein 3 isoform 1 [Canis lupus familiaris]
Length = 2043
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVK 249
D R+ +R L L + E + +V ++ +VA E +F + + Y+ K
Sbjct: 927 DQIRQSVRHSLKDILMRRLTESNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 982
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
YRS++FNL DP+N +KVL G V P+ LI+MS EE+ S
Sbjct: 983 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS 1022
>gi|355762974|gb|EHH62098.1| hypothetical protein EGM_20299 [Macaca fascicularis]
Length = 2040
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 63/128 (49%), Gaps = 18/128 (14%)
Query: 162 NVDAEAIREEKPASAVVPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNG 221
NV A KP++ + Q + R +++ L K L+ + +V EE K
Sbjct: 912 NVHPPAASASKPSADQIRQSV----------RHSLKDILMKRLTDSNLKVPEEKAAK--- 958
Query: 222 CDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIK 281
VA E +F + + Y+ KYRS++FNL DP+N +KVL G V P+ LI+
Sbjct: 959 -----VATKIEKELFSFFRDTDSKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIR 1013
Query: 282 MSSEEMVS 289
MS EE+ S
Sbjct: 1014 MSPEELAS 1021
>gi|242017625|ref|XP_002429288.1| transcription elongation factor S-II, putative [Pediculus humanus
corporis]
gi|212514184|gb|EEB16550.1| transcription elongation factor S-II, putative [Pediculus humanus
corporis]
Length = 289
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 81/176 (46%), Gaps = 18/176 (10%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGC-DPIRVAITAESLMFEKWGHSFGTYEV 248
D R + RE L A + G + D+++GC P +A E +F ++ ++ Y+
Sbjct: 124 DSVRIKCRELLAAA---IKGNTE---SDQVDGCGSPEDLAEELEEAIFNEFRNTDIKYKN 177
Query: 249 KYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRY 308
+ RS + NL DP+NP+ R L+G + L M++EE+ SD +++ + KKE +D
Sbjct: 178 RIRSRVANLKDPKNPNLRMNYLIGALPASRLAVMTAEELASDEMKQIRDKFKKEAINDAQ 237
Query: 309 LPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
L G + CG+C K+ + Q SA + C C W+
Sbjct: 238 LATVQGTKTDLLK-----CGKC-KKRNCTYNQVQTRSADEPMTTFVLCNECGNRWK 287
>gi|403341216|gb|EJY69907.1| Transcription elongation factor TFIIS [Oxytricha trifallax]
Length = 340
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 6/119 (5%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
Y+ K RS++FNL DP+NPD R ++ G ++P L+++ S+ + S + + ++ +
Sbjct: 222 YQNKARSLMFNLKDPKNPDLRMSLIEGVIEPNQLVRLDSKSLASKALQDERNKTQQANLN 281
Query: 306 DRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
R W + + C +C H K T + Q A I CL+C W+
Sbjct: 282 ARRSDWFIENAAKKGNKGFFTCKKC-HSKNTTYFQMQTRGADEPMTNFITCLDCKNQWK 339
>gi|355561823|gb|EHH18455.1| hypothetical protein EGK_15055 [Macaca mulatta]
Length = 2040
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 63/128 (49%), Gaps = 18/128 (14%)
Query: 162 NVDAEAIREEKPASAVVPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNG 221
NV A KP++ + Q + R +++ L K L+ + +V EE K
Sbjct: 912 NVHPPAASASKPSADQIRQSV----------RHSLKDILMKRLTDSNLKVPEEKAAK--- 958
Query: 222 CDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIK 281
VA E +F + + Y+ KYRS++FNL DP+N +KVL G V P+ LI+
Sbjct: 959 -----VATKIEKELFSFFRDTDSKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIR 1013
Query: 282 MSSEEMVS 289
MS EE+ S
Sbjct: 1014 MSPEELAS 1021
>gi|322712025|gb|EFZ03598.1| transcription elongation factor S-II [Metarhizium anisopliae ARSEF
23]
Length = 300
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 64/142 (45%), Gaps = 12/142 (8%)
Query: 223 DPIRVAITAESLMFEKWGHSFGT-YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIK 281
D I A+ E +F ++ G Y+ K RS+ NL N D ++V+ G + PE K
Sbjct: 162 DVIARAVAVEHAVFIEFKEDEGEGYKKKIRSLFANLKTKSNKDLGKRVMSGDISPEKFAK 221
Query: 282 MSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGND 341
M+ EE+ S+ R+ +++KE +P + S CGRC KK + +
Sbjct: 222 MTDEELKSEDQRKKEIELEKENMKRAQVP-----MAEKSISDSLECGRCKMKKVS-YTQA 275
Query: 342 QNSSAKR-----IKCLNCYQYW 358
Q SA +C+NC W
Sbjct: 276 QTRSADEPMTTFCECMNCGHRW 297
>gi|383417063|gb|AFH31745.1| PHD finger protein 3 [Macaca mulatta]
Length = 2040
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 63/128 (49%), Gaps = 18/128 (14%)
Query: 162 NVDAEAIREEKPASAVVPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNG 221
NV A KP++ + Q + R +++ L K L+ + +V EE K
Sbjct: 912 NVHPPAASASKPSADQIRQSV----------RHSLKDILMKRLTDSNLKVPEEKAAK--- 958
Query: 222 CDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIK 281
VA E +F + + Y+ KYRS++FNL DP+N +KVL G V P+ LI+
Sbjct: 959 -----VATKIEKELFSFFRDTDSKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIR 1013
Query: 282 MSSEEMVS 289
MS EE+ S
Sbjct: 1014 MSPEELAS 1021
>gi|380811170|gb|AFE77460.1| PHD finger protein 3 [Macaca mulatta]
Length = 2040
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 63/128 (49%), Gaps = 18/128 (14%)
Query: 162 NVDAEAIREEKPASAVVPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNG 221
NV A KP++ + Q + R +++ L K L+ + +V EE K
Sbjct: 912 NVHPPAASASKPSADQIRQSV----------RHSLKDILMKRLTDSNLKVPEEKAAK--- 958
Query: 222 CDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIK 281
VA E +F + + Y+ KYRS++FNL DP+N +KVL G V P+ LI+
Sbjct: 959 -----VATKIEKELFSFFRDTDSKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIR 1013
Query: 282 MSSEEMVS 289
MS EE+ S
Sbjct: 1014 MSPEELAS 1021
>gi|297291110|ref|XP_001106919.2| PREDICTED: PHD finger protein 3 [Macaca mulatta]
Length = 2037
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 63/128 (49%), Gaps = 18/128 (14%)
Query: 162 NVDAEAIREEKPASAVVPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNG 221
NV A KP++ + Q + R +++ L K L+ + +V EE K
Sbjct: 913 NVHPPAASASKPSADQIRQSV----------RHSLKDILMKRLTDSNLKVPEEKAAK--- 959
Query: 222 CDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIK 281
VA E +F + + Y+ KYRS++FNL DP+N +KVL G V P+ LI+
Sbjct: 960 -----VATKIEKELFSFFRDTDSKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIR 1014
Query: 282 MSSEEMVS 289
MS EE+ S
Sbjct: 1015 MSPEELAS 1022
>gi|115385046|ref|XP_001209070.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114196762|gb|EAU38462.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 305
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 55/119 (46%), Gaps = 11/119 (9%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
Y K RS+ NL + NP R +VL V PE +KMS +E+ S R + +I+K+
Sbjct: 192 YRTKIRSLYQNLKNKSNPTLRVRVLSSEVTPEHFVKMSHDELRSAEQREQDAKIQKQNMD 251
Query: 306 DRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
+ + ST CG+CG +K T + Q SA C+NC + W+
Sbjct: 252 KAMVAQAERSI-----STSLQCGKCGQRKVT-YTEAQTRSADEPMTLFCTCMNCGKSWK 304
>gi|281350870|gb|EFB26454.1| hypothetical protein PANDA_015611 [Ailuropoda melanoleuca]
Length = 2043
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVK 249
D R+ +R L L K + + +V ++ +VA E +F + + Y+ K
Sbjct: 928 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 983
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
YRS++FNL DP+N +KVL G V P+ LI+MS EE+ S
Sbjct: 984 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS 1023
>gi|402867376|ref|XP_003897831.1| PREDICTED: LOW QUALITY PROTEIN: PHD finger protein 3 [Papio anubis]
Length = 2165
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 63/128 (49%), Gaps = 18/128 (14%)
Query: 162 NVDAEAIREEKPASAVVPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNG 221
NV A KP++ + Q + R +++ L K L+ + +V EE K
Sbjct: 1037 NVHPPAASASKPSADQIRQSV----------RHSLKDILMKRLTDSNLKVPEEKAAK--- 1083
Query: 222 CDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIK 281
VA E +F + + Y+ KYRS++FNL DP+N +KVL G V P+ LI+
Sbjct: 1084 -----VATKIEKELFSFFRDTDSKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIR 1138
Query: 282 MSSEEMVS 289
MS EE+ S
Sbjct: 1139 MSPEELAS 1146
>gi|355711246|gb|AES03948.1| PHD finger protein 3 [Mustela putorius furo]
Length = 1987
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVK 249
D R+ +R L L K + + +V ++ +VA E +F + + Y+ K
Sbjct: 873 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 928
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
YRS++FNL DP+N +KVL G V P+ LI+MS EE+ S
Sbjct: 929 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS 968
>gi|7662018|ref|NP_055968.1| PHD finger protein 3 [Homo sapiens]
gi|34098662|sp|Q92576.3|PHF3_HUMAN RecName: Full=PHD finger protein 3
gi|6648928|gb|AAF21292.1|AF091622_1 PHD finger protein 3 [Homo sapiens]
gi|109731109|gb|AAI13651.1| PHD finger protein 3 [Homo sapiens]
gi|109731774|gb|AAI13653.1| PHD finger protein 3 [Homo sapiens]
gi|119608902|gb|EAW88496.1| PHD finger protein 3 [Homo sapiens]
gi|126540985|emb|CAM45842.1| PHD finger protein 3 [Homo sapiens]
gi|168278551|dbj|BAG11155.1| PHD finger protein 3 [synthetic construct]
Length = 2039
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVK 249
D R+ +R L L K + + +V ++ +VA E +F + + Y+ K
Sbjct: 925 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 980
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
YRS++FNL DP+N +KVL G V P+ LI+MS EE+ S
Sbjct: 981 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS 1020
>gi|20521870|dbj|BAA13438.2| KIAA0244 [Homo sapiens]
Length = 2044
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVK 249
D R+ +R L L K + + +V ++ +VA E +F + + Y+ K
Sbjct: 930 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 985
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
YRS++FNL DP+N +KVL G V P+ LI+MS EE+ S
Sbjct: 986 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS 1025
>gi|60219226|emb|CAI56715.1| hypothetical protein [Homo sapiens]
Length = 1951
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVK 249
D R+ +R L L K + + +V ++ +VA E +F + + Y+ K
Sbjct: 837 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 892
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
YRS++FNL DP+N +KVL G V P+ LI+MS EE+ S
Sbjct: 893 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS 932
>gi|417406878|gb|JAA50079.1| Putative transcription factor datf1 [Desmodus rotundus]
Length = 2045
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVK 249
D R+ +R L L K + + +V ++ +VA E +F + + Y+ K
Sbjct: 930 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 985
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
YRS++FNL DP+N +KVL G V P+ LI+MS EE+ S
Sbjct: 986 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS 1025
>gi|301781204|ref|XP_002926018.1| PREDICTED: PHD finger protein 3-like [Ailuropoda melanoleuca]
Length = 2074
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVK 249
D R+ +R L L K + + +V ++ +VA E +F + + Y+ K
Sbjct: 959 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 1014
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
YRS++FNL DP+N +KVL G V P+ LI+MS EE+ S
Sbjct: 1015 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS 1054
>gi|194894439|ref|XP_001978066.1| GG17893 [Drosophila erecta]
gi|190649715|gb|EDV46993.1| GG17893 [Drosophila erecta]
Length = 162
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 65/143 (45%), Gaps = 8/143 (5%)
Query: 221 GCD-PIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEAL 279
GCD P +A E ++ + Y+ + RS L NL DP+NP R K LLG + E L
Sbjct: 25 GCDDPEDMAAQLEEAIYVELKSCQVKYKNRIRSRLANLRDPKNPALREKFLLGLISVEQL 84
Query: 280 IKMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTN-H 338
+M+ EEM SD +++ Q+ +E + + G ++ C RC + H
Sbjct: 85 ARMTPEEMASDDLKQMRQKFVQESINAAQMAEFQGTKTDLFK-----CDRCQKRNCIQLH 139
Query: 339 GNDQNSSA-KRIKCLNCYQYWES 360
D + S + C C W++
Sbjct: 140 TRDGDESMITFVMCDECGNRWKN 162
>gi|395737392|ref|XP_002817084.2| PREDICTED: LOW QUALITY PROTEIN: PHD finger protein 3, partial [Pongo
abelii]
Length = 2061
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVK 249
D R+ +R L L K + + +V ++ +VA E +F + + Y+ K
Sbjct: 940 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 995
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
YRS++FNL DP+N +KVL G V P+ LI+MS EE+ S
Sbjct: 996 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS 1035
>gi|431838241|gb|ELK00173.1| PHD finger protein 3 [Pteropus alecto]
Length = 2121
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVK 249
D R+ +R L L K + + +V ++ +VA E +F + + Y+ K
Sbjct: 991 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 1046
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
YRS++FNL DP+N +KVL G V P+ LI+MS EE+ S
Sbjct: 1047 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS 1086
>gi|348570704|ref|XP_003471137.1| PREDICTED: SPOC domain-containing protein 1-like [Cavia porcellus]
Length = 1143
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%)
Query: 227 VAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEE 286
+A E+ +F+ + Y+ KYR++LFNL DP NPD KV+ G+V P L++MSS +
Sbjct: 565 IAADIEAALFDLMQGTTYRYKTKYRTLLFNLRDPRNPDLFLKVVHGNVTPHDLVRMSSVQ 624
Query: 287 MVSDGSRRLNQQIKKE 302
+ S R Q +K+
Sbjct: 625 LASQELARWRDQEEKK 640
>gi|456753196|gb|JAA74119.1| PHD finger protein 3 [Sus scrofa]
Length = 2032
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVK 249
D R+ +R L L K + + +V ++ +VA E +F + + Y+ K
Sbjct: 918 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 973
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
YRS++FNL DP+N +KVL G V P+ LI+MS EE+ S
Sbjct: 974 YRSLMFNLKDPKNNILFKKVLRGEVTPDHLIRMSPEELAS 1013
>gi|344232834|gb|EGV64707.1| transcription elongation factor [Candida tenuis ATCC 10573]
Length = 286
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 77/165 (46%), Gaps = 19/165 (11%)
Query: 200 LYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMF-EKWGHSFGTYEVKYRSILFNLM 258
LY AL+ G+ +++ + VA + E+ +F +++ Y K R+ + NL
Sbjct: 134 LYTALAIERGDSSQQI---------LSVAKSIEAEVFKDEYSKVADGYRNKLRTFVMNLR 184
Query: 259 DPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGP 318
+ +NP+ R ++L G + P +KMS EM + ++ +++ K+ D G
Sbjct: 185 NKKNPELRDRILSGQITPGKFVKMSPNEMAPETLKKEIEKLHKQNLFDAQ-----GATEK 239
Query: 319 IYHSTRYMCGRCGHKKTTNHGNDQNSSAKRI----KCLNCYQYWE 359
+ R+ CG+C HKK + + S+ + + C NC W+
Sbjct: 240 RAVTDRFTCGKCKHKKVSYYQMQTRSADEPLTTFCTCENCGNRWK 284
>gi|307105461|gb|EFN53710.1| hypothetical protein CHLNCDRAFT_53651 [Chlorella variabilis]
Length = 1283
Score = 57.4 bits (137), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/98 (31%), Positives = 56/98 (57%), Gaps = 3/98 (3%)
Query: 192 FRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVKYR 251
R+++R + +AL V+ E E +L +P A E+ +F+ +G + Y+ K+R
Sbjct: 367 LRQKVRGGIQQALELVATEAAGEA-GRLP--EPAPTAEAVEAALFKLYGGTTKDYKQKFR 423
Query: 252 SILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
++ FNL D NPD R VL G + P+A ++M++ E+ +
Sbjct: 424 TLQFNLKDAHNPDLRAHVLRGDIAPDAFVRMTATELAN 461
>gi|302507047|ref|XP_003015480.1| hypothetical protein ARB_06606 [Arthroderma benhamiae CBS 112371]
gi|291179052|gb|EFE34840.1| hypothetical protein ARB_06606 [Arthroderma benhamiae CBS 112371]
Length = 297
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 63/140 (45%), Gaps = 12/140 (8%)
Query: 225 IRVAITAESLMFEKWG-HSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMS 283
+R A E+ F+ +G + Y K RS+ NL + N R +VL V PE + M+
Sbjct: 162 LRKATEVEAAAFKAFGPENKEVYRTKMRSLFQNLKNKSNLSLRTRVLTNEVTPERFVNMT 221
Query: 284 SEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQN 343
EE+ SD R +++I+KE + G I S CG+CG +K T + Q
Sbjct: 222 HEELKSDERREEDRKIQKENMDKAMV---GQPERSISKS--LQCGKCGQRKVT-YTEAQT 275
Query: 344 SSAKR-----IKCLNCYQYW 358
SA CL C + W
Sbjct: 276 RSADEPMTLFCTCLACGKSW 295
>gi|281351551|gb|EFB27135.1| hypothetical protein PANDA_001093 [Ailuropoda melanoleuca]
Length = 332
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 76/182 (41%), Gaps = 25/182 (13%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFG----- 244
D R++ E L AL + +++ +D CD ++A E + E H +
Sbjct: 162 DSVRDKCVEMLSAAL-----KAEDDYKDYGVNCD--KMASEIEDHILELRSHIYQELKST 214
Query: 245 --TYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKE 302
Y + RS + NL DP NP RR VL G + + KM++EEM SD R L + +E
Sbjct: 215 DMKYRNRVRSRISNLKDPRNPSLRRNVLSGTISAGLIAKMTAEEMASDELRELRNAMTQE 274
Query: 303 RASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQY 357
+ + GG ++ C +C KK + Q SA + C C
Sbjct: 275 AIREHQMAKTGGTTTDLFQ-----CSKC-KKKNCTYNQVQTRSADEPMTTFVLCNECGNR 328
Query: 358 WE 359
W+
Sbjct: 329 WK 330
>gi|432112838|gb|ELK35434.1| PHD finger protein 3 [Myotis davidii]
Length = 2033
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVK 249
D R+ +R L L K + + +V ++ +VA E +F + + Y+ K
Sbjct: 925 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 980
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
YRS++FNL DP+N +KVL G V P+ LI+MS EE+ S
Sbjct: 981 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS 1020
>gi|332253853|ref|XP_003276047.1| PREDICTED: PHD finger protein 3, partial [Nomascus leucogenys]
Length = 1807
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 53/97 (54%), Gaps = 8/97 (8%)
Query: 193 RERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVKYRS 252
R +++ L K L+ + +V EE K VA E +F + + Y+ KYRS
Sbjct: 698 RHSLKDILMKRLTDSNLKVPEEKAAK--------VATKIEKELFSFFRDTDAKYKNKYRS 749
Query: 253 ILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
++FNL DP+N +KVL G V P+ LI+MS EE+ S
Sbjct: 750 LMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS 786
>gi|194391306|dbj|BAG60771.1| unnamed protein product [Homo sapiens]
Length = 861
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVK 249
D R+ +R L L K + + +V ++ +VA E +F + + Y+ K
Sbjct: 194 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 249
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
YRS++FNL DP+N +KVL G V P+ LI+MS EE+ S
Sbjct: 250 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS 289
>gi|354485811|ref|XP_003505075.1| PREDICTED: PHD finger protein 3-like [Cricetulus griseus]
Length = 2005
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 60/117 (51%), Gaps = 12/117 (10%)
Query: 173 PASAVVPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAE 232
PA+A P S + R +++ L + L+ + +V EE K VA E
Sbjct: 898 PAAASKP----SADQIRQSVRHSLKDILMRRLTDSNLKVPEEKAAK--------VATKIE 945
Query: 233 SLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
+F + + Y+ KYRS++FNL DP+N +KVL G V P+ LI+MS EE+ S
Sbjct: 946 KELFSFFRDTDSKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS 1002
>gi|68486327|ref|XP_712962.1| hypothetical protein CaO19.4537 [Candida albicans SC5314]
gi|68486518|ref|XP_712868.1| hypothetical protein CaO19.12012 [Candida albicans SC5314]
gi|46434285|gb|EAK93699.1| hypothetical protein CaO19.12012 [Candida albicans SC5314]
gi|46434386|gb|EAK93797.1| hypothetical protein CaO19.4537 [Candida albicans SC5314]
gi|238879330|gb|EEQ42968.1| hypothetical protein CAWG_01194 [Candida albicans WO-1]
Length = 305
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 68/140 (48%), Gaps = 10/140 (7%)
Query: 225 IRVAITAESLMFE-KWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMS 283
+R+AI E+ +++ ++ +Y + RS NL + +NP+ R ++L + P A IKM+
Sbjct: 169 LRIAIEIEAEVYKSEYSKVSDSYRNRLRSFTMNLRNKKNPELRERILSKQILPAAFIKMT 228
Query: 284 SEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQN 343
EM + ++ +++ K+ D G + R+ CG+C HKK + +
Sbjct: 229 PNEMAPEALKKEIEKLHKQNLFD-----AQGATEKRAVTDRFTCGKCKHKKVSYYQMQTR 283
Query: 344 SSAKRI----KCLNCYQYWE 359
S+ + + C NC W+
Sbjct: 284 SADEPLTTFCTCENCGNRWK 303
>gi|332862537|ref|XP_003317936.1| PREDICTED: PHD finger protein 3 isoform 2 [Pan troglodytes]
Length = 1951
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%)
Query: 226 RVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSE 285
+VA E +F + + Y+ KYRS++FNL DP+N +KVL G V P+ LI+MS E
Sbjct: 869 KVATKIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPE 928
Query: 286 EMVS 289
E+ S
Sbjct: 929 ELAS 932
>gi|426353656|ref|XP_004044303.1| PREDICTED: PHD finger protein 3-like [Gorilla gorilla gorilla]
Length = 1309
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 53/97 (54%), Gaps = 8/97 (8%)
Query: 193 RERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVKYRS 252
R +++ L K L+ + +V EE K VA E +F + + Y+ KYRS
Sbjct: 201 RHSLKDILMKRLTDSNLKVPEEKAAK--------VATKIEKELFSFFRDTDAKYKNKYRS 252
Query: 253 ILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
++FNL DP+N +KVL G V P+ LI+MS EE+ S
Sbjct: 253 LMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS 289
>gi|395521671|ref|XP_003764939.1| PREDICTED: transcription elongation factor A protein 3 [Sarcophilus
harrisii]
Length = 479
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 80/186 (43%), Gaps = 18/186 (9%)
Query: 189 NDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEV 248
D R++ E L AL ++D + ++ CD ++A E ++++ + Y
Sbjct: 198 GDSVRDKCVEMLSAAL-----KMDGDYKEYGVNCD--KMASEIEDHIYQELKGTDMKYRN 250
Query: 249 KYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRY 308
+ RS + NL DP NP RR VL G + + +M++EEM SD + L + E +
Sbjct: 251 RVRSRISNLKDPRNPSLRRNVLCGAISTSLIARMTAEEMASDELKELRSAMTLEAIREHQ 310
Query: 309 LPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWESTTA 363
+ GG ++ C +C KK + Q SA + C C W+ +
Sbjct: 311 MAKTGGTTTDLFQ-----CSKC-KKKNCTYNQVQTRSADEPMTTFVLCNECGNRWKVCIS 364
Query: 364 LYGLLP 369
++P
Sbjct: 365 FAFIVP 370
>gi|351714850|gb|EHB17769.1| Transcription elongation factor A protein 2 [Heterocephalus glaber]
Length = 335
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
Y+ + RS + NL D +NP+ RR VL G + P+ + M+SEEM SD + + + + KE
Sbjct: 157 YKNRVRSRISNLKDAKNPELRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIR 216
Query: 306 DRYLPWKGGYLGPIYHSTRYMCGRCGHKKTT 336
+ + GG + + CG+C K T
Sbjct: 217 EHQMARTGG-----TQTDLFTCGKCRKKNCT 242
>gi|332862535|ref|XP_003317935.1| PREDICTED: PHD finger protein 3 isoform 1 [Pan troglodytes]
gi|410216400|gb|JAA05419.1| PHD finger protein 3 [Pan troglodytes]
gi|410258332|gb|JAA17133.1| PHD finger protein 3 [Pan troglodytes]
gi|410301720|gb|JAA29460.1| PHD finger protein 3 [Pan troglodytes]
gi|410354663|gb|JAA43935.1| PHD finger protein 3 [Pan troglodytes]
Length = 2039
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%)
Query: 226 RVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSE 285
+VA E +F + + Y+ KYRS++FNL DP+N +KVL G V P+ LI+MS E
Sbjct: 957 KVATKIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPE 1016
Query: 286 EMVS 289
E+ S
Sbjct: 1017 ELAS 1020
>gi|171687673|ref|XP_001908777.1| hypothetical protein [Podospora anserina S mat+]
gi|170943798|emb|CAP69450.1| unnamed protein product [Podospora anserina S mat+]
Length = 295
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 72/165 (43%), Gaps = 20/165 (12%)
Query: 200 LYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMD 259
LY L+ + E EEV +R+A+ E+ F + Y K R ++ +L
Sbjct: 144 LYNGLAYRATESVEEV---------VRLAMEVEAAAFRVFKGDTPEYRQKIRGLMTSLKR 194
Query: 260 PENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPI 319
+NP ++V G + P+ +KM+ E+ SD R ++++++E +P +
Sbjct: 195 KDNPALGKRVRSGAITPDTFVKMTDVELASDAQRAEDEKLQQENMKKAQVPMAEKSI--- 251
Query: 320 YHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
S CG+CG KK + + Q SA +C C W+
Sbjct: 252 --SDALKCGKCGQKKVS-YSQAQTRSADEPMTTFCECTVCGNRWK 293
>gi|397521935|ref|XP_003831038.1| PREDICTED: LOW QUALITY PROTEIN: PHD finger protein 3, partial [Pan
paniscus]
Length = 2054
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%)
Query: 226 RVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSE 285
+VA E +F + + Y+ KYRS++FNL DP+N +KVL G V P+ LI+MS E
Sbjct: 972 KVATKIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPE 1031
Query: 286 EMVS 289
E+ S
Sbjct: 1032 ELAS 1035
>gi|444728032|gb|ELW68496.1| Zinc finger protein 436 [Tupaia chinensis]
Length = 763
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 61/141 (43%), Gaps = 15/141 (10%)
Query: 227 VAITAESLMFEKWGHSFGTYEVKYR----SILFNLMDPENPDFRRKVLLGHVKPEALIKM 282
A A SL ++ + ++KYR S + NL DP NP RRKVL G + + KM
Sbjct: 138 TAQCARSLAQRRYSRELSSTDMKYRNRVRSRISNLKDPRNPGLRRKVLSGAIAAGLIAKM 197
Query: 283 SSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQ 342
++EEM SD R L + +E + + GG + + C +C KK + Q
Sbjct: 198 TAEEMASDELRELRNAMTQEAIREHQMAKTGGTTTDL-----FQCSKCK-KKNCTYNQVQ 251
Query: 343 NSSAKR-----IKCLNCYQYW 358
SA + C C W
Sbjct: 252 TRSADEPMTTFVLCNECGNRW 272
>gi|443915704|gb|ELU37060.1| transcription factor s-II (TFIIS), central domain-containing
protein [Rhizoctonia solani AG-1 IA]
Length = 377
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 125/317 (39%), Gaps = 29/317 (9%)
Query: 20 ASAEGELEEAQCIAALDQLHKSSI-TCQLLVSTQLVRHLLPLTKHPRQKIQDTASELILS 78
A+ G+ E+ I L QL +S + T +LL T+ + L HPR++I D A EL+
Sbjct: 16 ATTTGKPEDGVTI--LKQLKQSVVATEELLRETKAGLAIGKLRSHPRKEIADLAKELVKK 73
Query: 79 WRSLFLEQMKGDEENGSFAICGEIKSANVEIAKGKRQITSDEFEQALDVEVVKVRRVDQK 138
W+ +E K + G G + + GK Q + + +K
Sbjct: 74 WKEA-VEAGKKVKAAG-----GTPSTPSTATPSGKPTPPPAATSQPTKPQPSPIDPPSRK 127
Query: 139 GAPRSKKLVGSEFIVTEETNSLDNVDAEAIREEKPASAVVPQKLVSMIKCNDYFRERIRE 198
+ + S ++ T +L + +R V V + D R++ E
Sbjct: 128 QSVST--TAASTPTSSKPTPTLKQPQSNVVR-------TVKNDAVKIESKGDKTRDKCME 178
Query: 199 KLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLM 258
LY A++ SG + L I E +++++ Y K R + NL
Sbjct: 179 LLYDAMASDSGARESTHLIILKRVYAI------EYQVYKEFDGVTKEYSTKMRRLFNNLK 232
Query: 259 DPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGP 318
D +NP R V+ G + E +KM+ EEM S+ ++ N + + G P
Sbjct: 233 DKKNPGLREAVVSGDISAEKFVKMTPEEMASEERKQQNSALNEANVHAAL-----GAGEP 287
Query: 319 IYHSTRYMCGRCGHKKT 335
+ + CGRC + KT
Sbjct: 288 EAETDAFQCGRCKNFKT 304
>gi|3347836|gb|AAC64680.1| transcription elongation factor S-II [Xenopus laevis]
Length = 121
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 11/119 (9%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
Y + RS + NL DP+NP+ R+ VL G V P+++ M++EEM SD R L + +E
Sbjct: 7 YRNRIRSRISNLKDPKNPNLRKNVLCGVVTPQSIATMTAEEMASDELRELRNTMTQEAIR 66
Query: 306 DRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
+ + GG + C +C KK ++ Q SA + C C W+
Sbjct: 67 EHQMAKTGGTQTDLLQ-----CEKC-KKKNCSYNQVQTRSADEPMTTFVLCNECGNRWK 119
>gi|326472154|gb|EGD96163.1| transcription elongation factor S-II [Trichophyton tonsurans CBS
112818]
gi|326476985|gb|EGE00995.1| transcription elongation factor S-II [Trichophyton equinum CBS
127.97]
Length = 297
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 63/140 (45%), Gaps = 12/140 (8%)
Query: 225 IRVAITAESLMFEKWG-HSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMS 283
+R A E+ F+ +G + Y K RS+ NL + N R +VL V PE + M+
Sbjct: 162 LRKATDVEAAAFKAFGPETKEAYRTKIRSLYQNLKNKSNLSLRTRVLTNEVTPERFVNMT 221
Query: 284 SEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQN 343
EE+ SD R +++I+KE + G I S CG+CG +K T + Q
Sbjct: 222 HEELKSDERREEDRKIQKENMDKAMV---GQPERSISKS--LQCGKCGQRKVT-YTEAQT 275
Query: 344 SSAKR-----IKCLNCYQYW 358
SA CL C + W
Sbjct: 276 RSADEPMTLFCTCLACGKSW 295
>gi|26337609|dbj|BAC32490.1| unnamed protein product [Mus musculus]
Length = 371
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%)
Query: 226 RVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSE 285
+VA E +F + + Y+ KYRS++FNL DP+N +KVL G V P+ LI+MS E
Sbjct: 227 KVATKIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPE 286
Query: 286 EMVS 289
E+ S
Sbjct: 287 ELAS 290
>gi|334324097|ref|XP_001372425.2| PREDICTED: PHD finger protein 3 [Monodelphis domestica]
Length = 2036
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%)
Query: 226 RVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSE 285
+VA E +F + + Y+ KYRS++FNL DP+N +KVL G V P+ LI+MS E
Sbjct: 956 KVATKIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPE 1015
Query: 286 EMVS 289
E+ S
Sbjct: 1016 ELAS 1019
>gi|213406231|ref|XP_002173887.1| transcription elongation factor S-II [Schizosaccharomyces japonicus
yFS275]
gi|212001934|gb|EEB07594.1| transcription elongation factor S-II [Schizosaccharomyces japonicus
yFS275]
Length = 296
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 183 VSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHS 242
VS+ +D R LY AL+ + DE L I V + + S+ G +
Sbjct: 127 VSINVTDDRIRNNCIGLLYNALAM---DTDEPSSVLLKTASAIDVQVLSMSM-----GKT 178
Query: 243 FGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKE 302
Y K RS+ NL D +NP R++V+ G + P+ L +MSS E+ S+ R+ + ++++E
Sbjct: 179 DSAYRNKMRSLYMNLKDKQNPQLRKRVISGAISPKRLSEMSSAELASEDRRKEDAKLEQE 238
Query: 303 RASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTT 336
L G + + CG+C KK +
Sbjct: 239 N-----LFHAQGAKPQKAITDLFTCGKCKQKKVS 267
>gi|147904545|ref|NP_001090166.1| transcription elongation factor A (SII), 3 [Xenopus laevis]
gi|10801727|dbj|BAB16755.1| transcription elongation factor XSII-K1 [Xenopus laevis]
Length = 645
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 79/175 (45%), Gaps = 18/175 (10%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVK 249
D R++ E + AL + D++ + C+ R+A E ++ + + Y +
Sbjct: 482 DSVRDKCVEMVASAL-----KTDDDYKQFGTNCE--RLAWEIEECIYSEVKVTDMKYRNR 534
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYL 309
RS + NL DP+NP+ R+ VL G V P+++ M++EEM SD R L + +E + +
Sbjct: 535 IRSRISNLKDPKNPNLRKNVLCGVVTPQSIATMTAEEMASDELRELRNTMTQEAIREHQM 594
Query: 310 PWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
GG + C +C KK ++ Q SA + C C W+
Sbjct: 595 AKTGGTQTDL-----LQCEKC-KKKNCSYNQVQTRSADEPMTTFVLCNECGNRWK 643
>gi|219120375|ref|XP_002180927.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407643|gb|EEC47579.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 323
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 83/187 (44%), Gaps = 26/187 (13%)
Query: 192 FRERIREKLYKAL-----SKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTY 246
R+ I +K Y+ L + V+ + D L G P V I E+ + EK+ G Y
Sbjct: 143 MRQNICKKFYELLLLAKPALTEAGVNTDAVDHLIG--PRAVEI--EASLTEKFRDRKG-Y 197
Query: 247 EVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASD 306
K RS+ FNL +N ++V+LG V L+ +SE++ S +R+ K+
Sbjct: 198 TDKARSLAFNL--KKNQSLCQEVILGQVSASELVSFTSEQLASAETRQARATEAKKLIDS 255
Query: 307 RYLPWKG----------GYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKRIK----CL 352
R L W G G + +++ + CGRC KTT+ S+ + + CL
Sbjct: 256 RRLDWDQANEDKINEMCGIKGDLLNASLFTCGRCKSVKTTSTQKQTRSADEPMTVFVLCL 315
Query: 353 NCYQYWE 359
NC W+
Sbjct: 316 NCGNRWK 322
>gi|213623950|gb|AAI70441.1| Transcription elongation factor XSII-K1 [Xenopus laevis]
Length = 645
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 79/175 (45%), Gaps = 18/175 (10%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVK 249
D R++ E + AL + D++ + C+ R+A E ++ + + Y +
Sbjct: 482 DSVRDKCVEMVASAL-----KTDDDYKQFGTNCE--RLAWEIEECIYSEVKVTDMKYRNR 534
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYL 309
RS + NL DP+NP+ R+ VL G V P+++ M++EEM SD R L + +E + +
Sbjct: 535 IRSRISNLKDPKNPNLRKNVLCGVVTPQSIATMTAEEMASDELRELRNTMTQEAIREHQM 594
Query: 310 PWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
GG + C +C KK ++ Q SA + C C W+
Sbjct: 595 AKTGGTQTDL-----LQCEKC-KKKNCSYNQVQTRSADEPMTTFVLCNECGNRWK 643
>gi|213625366|gb|AAI70443.1| Transcription elongation factor XSII-K1 [Xenopus laevis]
Length = 645
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 79/175 (45%), Gaps = 18/175 (10%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVK 249
D R++ E + AL + D++ + C+ R+A E ++ + + Y +
Sbjct: 482 DSVRDKCVEMVASAL-----KTDDDYKQFGTNCE--RLAWEIEECIYSEVKVTDMKYRNR 534
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYL 309
RS + NL DP+NP+ R+ VL G V P+++ M++EEM SD R L + +E + +
Sbjct: 535 IRSRISNLKDPKNPNLRKNVLCGVVTPQSIATMTAEEMASDELRELRNTMTQEAIREHQM 594
Query: 310 PWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
GG + C +C KK ++ Q SA + C C W+
Sbjct: 595 AKTGGTQTDL-----LQCEKC-KKKNCSYNQVQTRSADEPMTTFVLCNECGNRWK 643
>gi|312382732|gb|EFR28086.1| hypothetical protein AND_04400 [Anopheles darlingi]
Length = 420
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 68/148 (45%), Gaps = 14/148 (9%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCD-PIRVAITAESLMFEKWGHSFGTYEV 248
D R + RE L AL +V GE E GC P + E +F ++ ++ Y+
Sbjct: 169 DAVRLKCREMLANAL-RVDGEPPE-------GCQTPEELGEELEEAIFVEFKNTDMRYKN 220
Query: 249 KYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRY 308
+ RS + NL DP+NP R + G + + L KM+SEEM SD + L + KE +D
Sbjct: 221 RIRSRVANLKDPKNPSLRSNFVSGALTAQRLAKMTSEEMASDEMKLLRDRFVKEAINDAQ 280
Query: 309 LPWKGGYLGPIYHSTRYMCGRCGHKKTT 336
L G + CG+C + T
Sbjct: 281 LATVQGTKTDLLK-----CGKCKKRNCT 303
>gi|194664368|ref|XP_588581.4| PREDICTED: SPOC domain-containing protein 1 [Bos taurus]
gi|297472143|ref|XP_002685704.1| PREDICTED: SPOC domain-containing protein 1 [Bos taurus]
gi|296490254|tpg|DAA32367.1| TPA: SPOC domain containing 1-like [Bos taurus]
Length = 1249
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 227 VAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEE 286
+A E+ +F + G Y+ KYRS+LFNL DP NP+ KV+ G + P L++MSS +
Sbjct: 659 IAAGIEAALFNLTQATNGRYKTKYRSLLFNLRDPRNPELFLKVVHGDITPHGLVRMSSVQ 718
Query: 287 MV 288
+
Sbjct: 719 LA 720
>gi|195385615|ref|XP_002051500.1| TfIIS [Drosophila virilis]
gi|194147957|gb|EDW63655.1| TfIIS [Drosophila virilis]
Length = 324
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 82/196 (41%), Gaps = 24/196 (12%)
Query: 170 EEKPASAVVPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAI 229
E+KPA+A M D R + RE L AL GEV + GC
Sbjct: 145 EKKPAAAQTTFPAGGMT---DAVRLKCREMLANALK--IGEVPD-------GCAEPEEMA 192
Query: 230 TAESL-MFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMV 288
++ ++ ++ Y+ + RS + NL DP+NP R + G V + L KM+ EEM
Sbjct: 193 AELEEAIYMEFKNTDMKYKNRIRSRVANLKDPKNPGLRSNFMCGAVSAKQLAKMTPEEMA 252
Query: 289 SDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR 348
SD ++L ++ KE +D L G + CG+C K+ + Q SA
Sbjct: 253 SDEMKKLREKFVKEAINDAQLATVQGTKTDLLK-----CGKC-KKRNCTYNQLQTRSADE 306
Query: 349 -----IKCLNCYQYWE 359
+ C C W+
Sbjct: 307 PMTTFVMCNECGNRWK 322
>gi|291396440|ref|XP_002714452.1| PREDICTED: PHD finger protein 3 [Oryctolagus cuniculus]
Length = 2194
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 63/128 (49%), Gaps = 18/128 (14%)
Query: 162 NVDAEAIREEKPASAVVPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNG 221
NV A KP++ + Q + R +++ L K L+ + +V EE K
Sbjct: 1065 NVHPPAATTSKPSANQIRQSV----------RHSLKDILMKRLTDSNLKVPEEKAAK--- 1111
Query: 222 CDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIK 281
VA E +F + + Y+ KYRS++FNL DP+N +KVL G V P+ LI+
Sbjct: 1112 -----VATKIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIR 1166
Query: 282 MSSEEMVS 289
M+ EE+ S
Sbjct: 1167 MNPEELAS 1174
>gi|384484057|gb|EIE76237.1| transcription elongation factor S-II [Rhizopus delemar RA 99-880]
Length = 304
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 77/172 (44%), Gaps = 20/172 (11%)
Query: 193 RERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVKYRS 252
R + E +Y A+ SG D E+ ++ A+ E+ +F+++G Y+ K R+
Sbjct: 146 RNKTIELMYSAVGLNSG-ADSELL--------LKRALAIETRIFDEYGSVNEGYKSKVRT 196
Query: 253 ILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYLPWK 312
+ NL NP R V+ G + E L MS EEM S+ + Q + + ++ L
Sbjct: 197 LANNLKSKSNPGLRESVVSGELTIEKLCTMSVEEMASEEA-----QARDRKLAEEALFKA 251
Query: 313 GGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
G + + CG+C +K T + Q SA + C+NC +W+
Sbjct: 252 RGATSAQAETDMFKCGKCQGRKCT-YFQMQTRSADEPMTTFVTCVNCGNHWK 302
>gi|339245691|ref|XP_003374479.1| transcription elongation factor S-II [Trichinella spiralis]
gi|316972266|gb|EFV55949.1| transcription elongation factor S-II [Trichinella spiralis]
Length = 347
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 11/139 (7%)
Query: 226 RVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSE 285
R+A E ++ + ++ Y RS +FNL D +NPD +R VL G + L M+SE
Sbjct: 213 RLAAEIEQEIYSLFNNTGDRYCACVRSRVFNLRDKKNPDLKRSVLSGEITAIRLATMTSE 272
Query: 286 EMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSS 345
EM S+ + ++ KE + + + G ++ CG+C HKK + Q S
Sbjct: 273 EMASEALKAARRKFTKEAIEEHQVAQEVGTPTDMFK-----CGKC-HKKNCTYTQAQTRS 326
Query: 346 AKR-----IKCLNCYQYWE 359
A + C C W+
Sbjct: 327 ADEPMTTFVYCRECGNRWK 345
>gi|327280228|ref|XP_003224854.1| PREDICTED: PHD finger protein 3-like [Anolis carolinensis]
Length = 2037
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 54/97 (55%), Gaps = 8/97 (8%)
Query: 193 RERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVKYRS 252
R+ ++E L K L+ + ++ EE K VA E +F + + Y+ KYRS
Sbjct: 932 RQSLKEILEKRLTDSTLKIPEERAAK--------VATKIEKELFSFFRDTDSKYKNKYRS 983
Query: 253 ILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
++FNL DP+N ++VL G V P+ LI+MS EE+ S
Sbjct: 984 LIFNLKDPKNKILFKRVLKGEVTPDHLIRMSPEELAS 1020
>gi|8050580|gb|AAF71710.1|AF220261_1 transcription elongation factor TFIIS [Drosophila virilis]
Length = 324
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 82/196 (41%), Gaps = 24/196 (12%)
Query: 170 EEKPASAVVPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAI 229
E+KPA+A M D R + RE L AL GEV + GC
Sbjct: 145 EKKPAAAQTTFPAGGMT---DAVRLKCREMLANALK--IGEVPD-------GCAEPEEMA 192
Query: 230 TAESL-MFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMV 288
++ ++ ++ Y+ + RS + NL DP+NP R + G V + L KM+ EEM
Sbjct: 193 AELEEAIYMEFKNTDMKYKNRIRSRVANLKDPKNPGLRSNFMCGAVSAKQLAKMTPEEMA 252
Query: 289 SDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR 348
SD ++L ++ KE +D L G + CG+C K+ + Q SA
Sbjct: 253 SDEMKKLREKFVKEAINDAQLATVQGTKTDLLK-----CGKC-KKRNCTYNQLQTRSADE 306
Query: 349 -----IKCLNCYQYWE 359
+ C C W+
Sbjct: 307 PMTTFVMCNECGNRWK 322
>gi|301620068|ref|XP_002939405.1| PREDICTED: transcription elongation factor A protein 3-like
[Xenopus (Silurana) tropicalis]
Length = 453
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 61/139 (43%), Gaps = 11/139 (7%)
Query: 226 RVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSE 285
R+A E ++ + Y + RS + NL DP+NP+ R+ VL G V P+ + M++E
Sbjct: 319 RLAWEIEECIYRDIKATDMKYRNRIRSRISNLKDPKNPNLRKNVLCGVVTPQNIATMTAE 378
Query: 286 EMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSS 345
EM SD R L + +E + + GG + C +C KK + Q S
Sbjct: 379 EMASDELRELRNTMTQEAIREHQMAKTGGTTTDLLQ-----CEKC-KKKNCTYNQVQTRS 432
Query: 346 AKR-----IKCLNCYQYWE 359
A + C C W+
Sbjct: 433 ADEPMTTFVLCNECGNRWK 451
>gi|322694712|gb|EFY86534.1| transcription elongation factor s-ii [Metarhizium acridum CQMa 102]
Length = 303
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 65/145 (44%), Gaps = 12/145 (8%)
Query: 223 DPIRVAITAESLMFEKWGHSFGT-YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIK 281
D I A+ E +F ++ G Y+ K RS+ NL N D ++V+ G + PE K
Sbjct: 162 DVIARAVAVEHAVFVEFKEDEGEGYKKKIRSLFANLKTKSNKDLGKRVMSGDILPEKFAK 221
Query: 282 MSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGND 341
M+ EE+ S+ R+ +++KE +P + S C RC KK + +
Sbjct: 222 MTDEELKSEDQRKKEIELEKENMKRAQVP-----MAEKSISDSLECSRCKMKKVS-YTQA 275
Query: 342 QNSSAKR-----IKCLNCYQYWEST 361
Q SA +C+NC W+ T
Sbjct: 276 QTRSADEPMTTFCECMNCGHRWKGT 300
>gi|148682474|gb|EDL14421.1| mCG4035 [Mus musculus]
Length = 2020
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%)
Query: 226 RVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSE 285
+VA E +F + + Y+ KYRS++FNL DP+N +KVL G V P+ LI+MS E
Sbjct: 936 KVATKIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPE 995
Query: 286 EMVS 289
E+ S
Sbjct: 996 ELAS 999
>gi|124487309|ref|NP_001074549.1| PHD finger protein 3 [Mus musculus]
gi|187953739|gb|AAI37914.1| PHD finger protein 3 [Mus musculus]
Length = 2025
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%)
Query: 226 RVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSE 285
+VA E +F + + Y+ KYRS++FNL DP+N +KVL G V P+ LI+MS E
Sbjct: 936 KVATKIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPE 995
Query: 286 EMVS 289
E+ S
Sbjct: 996 ELAS 999
>gi|388583993|gb|EIM24294.1| transcription elongation factor [Wallemia sebi CBS 633.66]
Length = 282
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 21/183 (11%)
Query: 183 VSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHS 242
V K ND R+ LY A+ S E V ++ A++ ES + + S
Sbjct: 113 VDFEKLNDKTRDTCLSLLYNAMVFDSSAPSELVMER---------ALSIESTVLDDNNGS 163
Query: 243 FGT-YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKK 301
G Y+ K RS++ NL D +NP R V+ G +MSS +M S+ ++ ++
Sbjct: 164 TGEEYKKKVRSLMLNLKDKKNPSLREAVISGDTPAATFCRMSSADMASE------ERKQQ 217
Query: 302 ERASDRYLPWKGGYLGPIYHST-RYMCGRCGHKKTTNHGNDQNSS----AKRIKCLNCYQ 356
+RA + +K GP T + CGRC +K T + S+ + C C
Sbjct: 218 DRALELSNLFKARGAGPQQAETDSFKCGRCKQRKCTYYQMQTRSADEPMTTFVTCTVCNN 277
Query: 357 YWE 359
W+
Sbjct: 278 RWK 280
>gi|119579238|gb|EAW58834.1| hCG1746234, isoform CRA_b [Homo sapiens]
Length = 241
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 71/149 (47%), Gaps = 12/149 (8%)
Query: 189 NDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEV 248
+D R + RE L AL +G+ E+ G D + E + + G++ Y+
Sbjct: 77 SDSVRMKYREMLPAALR--TGDDCIEM-----GTDEEELGSRTEEAIDPERGNTGMKYKN 129
Query: 249 KYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRY 308
+ +S + NL D +NPD R+ G++ P+ L +M++EEM SD + +++ ++KE +
Sbjct: 130 RVQSKISNLTDAKNPDLRKNAPCGNIPPDLLARMTAEEMASDELKEMHKNLRKEAIREHQ 189
Query: 309 LPWKGGYLGPIYHSTRYMCGRCGHKKTTN 337
+ GG C +C K T+
Sbjct: 190 MAKTGG-----TQPDSLTCAKCKKKNCTS 213
>gi|194207770|ref|XP_001916902.1| PREDICTED: LOW QUALITY PROTEIN: SPOC domain-containing protein 1
[Equus caballus]
Length = 1162
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 39/62 (62%)
Query: 227 VAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEE 286
+A E+ +F+ + Y+ KYRS+LFNL DP NPD KV+ G V P+ L++MSS +
Sbjct: 566 IAAGIEAALFDLTQATNCRYKTKYRSLLFNLRDPRNPDLFLKVVHGDVTPQGLVQMSSIQ 625
Query: 287 MV 288
+
Sbjct: 626 LA 627
>gi|150864771|ref|XP_001383742.2| hypothetical protein PICST_57286 [Scheffersomyces stipitis CBS
6054]
gi|149386027|gb|ABN65713.2| transcription elongation factor S-IIMeiotic DNA recombination
factor (STP-alpha) [Scheffersomyces stipitis CBS 6054]
Length = 294
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 67/140 (47%), Gaps = 10/140 (7%)
Query: 225 IRVAITAESLMFE-KWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMS 283
+ VA ES +F+ ++ + Y K R+ NL + +NP+ R ++L G +KP IKMS
Sbjct: 158 LSVAREIESEVFKSEYSNVNDNYRNKLRTFTMNLRNKKNPELRERLLSGGIKPAEFIKMS 217
Query: 284 SEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQN 343
EM + ++ +++ K+ D G + R+ CG+C HKK + +
Sbjct: 218 PNEMAPEALKKEIEKLHKKNLFD-----AQGATEKRAVTDRFTCGKCKHKKVSYYQMQTR 272
Query: 344 SSAKRI----KCLNCYQYWE 359
S+ + + C NC W+
Sbjct: 273 SADEPLTTFCTCENCGNRWK 292
>gi|149732314|ref|XP_001503413.1| PREDICTED: PHD finger protein 3 isoform 1 [Equus caballus]
Length = 2042
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 59/117 (50%), Gaps = 12/117 (10%)
Query: 173 PASAVVPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAE 232
PAS P S + R +++ L K L+ + +V EE K VA E
Sbjct: 921 PASTSKP----SADQIRQSVRHSLKDILMKRLTDSNLKVPEEKAAK--------VATKIE 968
Query: 233 SLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
+F + + Y+ KYRS++FNL DP+N +KVL G V P+ LI+MS EE+ S
Sbjct: 969 KELFCFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS 1025
>gi|345304943|ref|XP_001505863.2| PREDICTED: PHD finger protein 3-like [Ornithorhynchus anatinus]
Length = 1190
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 41/64 (64%)
Query: 226 RVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSE 285
+VA+ E +F + + Y+ KYRS++FNL DP+N +KVL G V P+ LI+MS E
Sbjct: 114 KVAMKIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPE 173
Query: 286 EMVS 289
E+ S
Sbjct: 174 ELAS 177
>gi|28972117|dbj|BAC65512.1| mKIAA0244 protein [Mus musculus]
Length = 1184
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%)
Query: 226 RVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSE 285
+VA E +F + + Y+ KYRS++FNL DP+N +KVL G V P+ LI+MS E
Sbjct: 95 KVATKIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPE 154
Query: 286 EMVS 289
E+ S
Sbjct: 155 ELAS 158
>gi|149732316|ref|XP_001503414.1| PREDICTED: PHD finger protein 3 isoform 2 [Equus caballus]
Length = 1954
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 59/117 (50%), Gaps = 12/117 (10%)
Query: 173 PASAVVPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAE 232
PAS P S + R +++ L K L+ + +V EE K VA E
Sbjct: 833 PASTSKP----SADQIRQSVRHSLKDILMKRLTDSNLKVPEEKAAK--------VATKIE 880
Query: 233 SLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
+F + + Y+ KYRS++FNL DP+N +KVL G V P+ LI+MS EE+ S
Sbjct: 881 KELFCFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS 937
>gi|159164218|pdb|2DME|A Chain A, Solution Structure Of The Tfiis Domain Ii Of Human Phd
Finger Protein 3
Length = 120
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 53/97 (54%), Gaps = 8/97 (8%)
Query: 193 RERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVKYRS 252
R +++ L K L+ + +V EE K VA E +F + + Y+ KYRS
Sbjct: 17 RHSLKDILMKRLTDSNLKVPEEKAAK--------VATKIEKELFSFFRDTDAKYKNKYRS 68
Query: 253 ILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
++FNL DP+N +KVL G V P+ LI+MS EE+ S
Sbjct: 69 LMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS 105
>gi|198419645|ref|XP_002120544.1| PREDICTED: similar to transcription elongation factor A (SII) 1
[Ciona intestinalis]
Length = 298
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 81/183 (44%), Gaps = 22/183 (12%)
Query: 184 SMIKCNDYFRERIREKLYKAL--SKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGH 241
S+ + R++ RE L + L SG D++ C + AI E ++ ++
Sbjct: 129 SLQSTGNSVRDKCREMLVRGLQTDNTSGHSDQQ-------CAFLAAAI--EEAIYSEFKD 179
Query: 242 SFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKK 301
+ Y+ + RS NL D N R VL G +KPE + KM++EEM SD ++ ++ ++
Sbjct: 180 TGVKYKNRIRSRFSNLKDTRNSILRLNVLNGILKPEQIAKMTAEEMASDEMKKKREEYEQ 239
Query: 302 ERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQ 356
+ D + G + ++CGRC + T + Q SA + C C
Sbjct: 240 QNIKDHQMSVNEG-----TKTDMFVCGRCKGRACT-YNQLQTRSADEPMTTFVFCTECGN 293
Query: 357 YWE 359
W+
Sbjct: 294 RWK 296
>gi|291233503|ref|XP_002736692.1| PREDICTED: transcription elongation factor A 1-like [Saccoglossus
kowalevskii]
Length = 138
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 11/119 (9%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
Y+ + RS + NL D NP R++VL G + PE + M++EEM SD + L +++ KE
Sbjct: 24 YKTRVRSRVANLKDVRNPILRQQVLCGSIPPEKIANMTAEEMASDRLKELRRELTKEAIR 83
Query: 306 DRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
+ + GG ++ CG+C K+ + Q SA + C C W+
Sbjct: 84 EAQMSTTGG-----TKTSLLKCGKC-KKRNCTYNQVQTRSADEPMTTFVFCNECGNRWK 136
>gi|449274195|gb|EMC83478.1| Transcription elongation factor A protein 2, partial [Columba
livia]
Length = 282
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
Y+ + RS + NL D +NP+ ++ VL G + PE + M+SEEM S+ + + + + KE
Sbjct: 170 YKNRVRSRISNLKDSKNPELKKNVLCGAITPEQIAVMTSEEMASNELKEIRKAMTKEAIR 229
Query: 306 DRYLPWKGGYLGPIYHSTRYMCGRCGHKKTT 336
+ + GG + + CG+C K T
Sbjct: 230 EHQMAKTGG-----TQTDLFTCGKCKKKNCT 255
>gi|359318997|ref|XP_003638964.1| PREDICTED: LOW QUALITY PROTEIN: SPOC domain-containing protein 1
[Canis lupus familiaris]
Length = 1183
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 38/62 (61%)
Query: 227 VAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEE 286
+A E+ +F + Y+ KYRS+LFNL DP NPD KV+ G V PE L++MSS +
Sbjct: 593 IAAGIETALFNLTQTTSCRYKTKYRSLLFNLRDPRNPDLFLKVVRGDVTPEDLVQMSSIQ 652
Query: 287 MV 288
+
Sbjct: 653 LA 654
>gi|317418995|emb|CBN81033.1| Death-inducer obliterator 1 [Dicentrarchus labrax]
Length = 2389
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 58/114 (50%), Gaps = 3/114 (2%)
Query: 176 AVVPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLM 235
A VP N+ R+ IR L L K + D+ K+ + R+A+ E M
Sbjct: 645 ASVPHVSPMPPPPNNQMRQNIRRSLTDILYKRVSDSDDL---KMTESEVGRLAVAIEKEM 701
Query: 236 FEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
F + Y+ KYRS++FNL DP+N +V+ G V P L+++S+EE++S
Sbjct: 702 FNLCLSTDSKYKNKYRSLMFNLKDPKNKGLFYRVVGGEVSPFRLVRLSAEELLS 755
>gi|327305353|ref|XP_003237368.1| transcription elongation factor S-II [Trichophyton rubrum CBS
118892]
gi|326460366|gb|EGD85819.1| transcription elongation factor S-II [Trichophyton rubrum CBS
118892]
Length = 297
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 63/140 (45%), Gaps = 12/140 (8%)
Query: 225 IRVAITAESLMFEKWG-HSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMS 283
+R A E+ F+ +G + Y K RS+ NL + N R +VL V PE + M+
Sbjct: 162 LRKATEVEAAAFKAFGPETKEVYRSKMRSLYQNLKNKSNLSLRTRVLTNEVTPERFVNMT 221
Query: 284 SEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQN 343
EE+ SD R +++I+KE + G I S CG+CG +K T + Q
Sbjct: 222 HEELKSDERREEDRKIQKENMDKAMV---GQPERSISKS--LQCGKCGQRKVT-YTEAQT 275
Query: 344 SSAKR-----IKCLNCYQYW 358
SA CL C + W
Sbjct: 276 RSADEPMTLFCTCLACGKSW 295
>gi|296805870|ref|XP_002843759.1| transcription elongation factor S-II [Arthroderma otae CBS 113480]
gi|238845061|gb|EEQ34723.1| transcription elongation factor S-II [Arthroderma otae CBS 113480]
Length = 297
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 63/140 (45%), Gaps = 12/140 (8%)
Query: 225 IRVAITAESLMFEKWG-HSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMS 283
++ A E+ F +G + +Y K RS+ NL N R +VL G V P+ + M+
Sbjct: 162 LQKATEVEAAAFNTYGPETKESYRTKIRSLYQNLKQKSNLSLRTRVLTGEVTPDRFVSMT 221
Query: 284 SEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQN 343
EE+ SD R +++I+KE + G I S CG+CG +K T + Q
Sbjct: 222 HEELKSDERREEDRKIQKENMDKAMV---GQPERSISKS--LQCGKCGQRKVT-YTEAQT 275
Query: 344 SSAKR-----IKCLNCYQYW 358
SA CL C + W
Sbjct: 276 RSADEPMTLFCTCLACGKSW 295
>gi|431891151|gb|ELK02028.1| SPOC domain-containing protein 1 [Pteropus alecto]
Length = 1093
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 227 VAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEE 286
+A E+ +F+ + Y+ KYRS+LFNL DP NPD KV+ G + P L++MSS +
Sbjct: 582 IAAGIEAALFDLTQATNCRYKTKYRSLLFNLRDPRNPDLFLKVVHGDITPHGLVQMSSMQ 641
Query: 287 MV 288
+
Sbjct: 642 LA 643
>gi|301619923|ref|XP_002939342.1| PREDICTED: hypothetical protein LOC100497807 [Xenopus (Silurana)
tropicalis]
Length = 392
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 53/104 (50%), Gaps = 13/104 (12%)
Query: 194 ERIREKLYKALSKV-------SGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTY 246
E +R +ALS V + ++D + + LN I E +F + H+ Y
Sbjct: 227 ENVRTTTVQALSDVLLKRVKEAPDLDVQEETLLNAAKNI------EQEIFALFYHTDARY 280
Query: 247 EVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSD 290
+ KYRSILFNL DP N R+++LG + P+ L +SS EM D
Sbjct: 281 KKKYRSILFNLKDPNNKVLFRRLVLGEITPQHLASLSSTEMAGD 324
>gi|403178039|ref|XP_003336480.2| transcription elongation factor S-II [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
gi|375173311|gb|EFP92061.2| transcription elongation factor S-II [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 382
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 57/128 (44%), Gaps = 19/128 (14%)
Query: 241 HSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIK 300
H Y++K RS++FNL D NP R V+ G + L M ++M S+
Sbjct: 263 HDSNGYKIKMRSLIFNLRDKNNPGLRESVVSGEISASRLCVMGPQDMASE---------- 312
Query: 301 KERASDRYLP----WKGGYLGPIYHST-RYMCGRCGHKKTTNHGNDQNSSAKR----IKC 351
+ +A DR L +K GP T + C RCG +K T + S+ + + C
Sbjct: 313 ERKAQDRKLAEENLFKARGAGPQQAETDAFRCARCGQRKCTYYQMQTRSADEPMTTFVTC 372
Query: 352 LNCYQYWE 359
+NC W+
Sbjct: 373 VNCNCRWK 380
>gi|403412176|emb|CCL98876.1| predicted protein [Fibroporia radiculosa]
Length = 348
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 67/152 (44%), Gaps = 14/152 (9%)
Query: 183 VSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHS 242
+ M D R++ E +Y AL+ SG E++ + A + ES + ++ +
Sbjct: 142 IKMNITGDKIRDKCVELIYDALASDSGAPSEQIMSR---------AKSIESTVLAEFSGT 192
Query: 243 FGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKE 302
G Y K R+ NL D NP R V+ G + + +MSS+EM S+ + + +I +E
Sbjct: 193 TGEYRSKIRTFFVNLKDKNNPGLRESVISGELPVQKFCRMSSQEMASEERKAADNRIIQE 252
Query: 303 RASDRYLPWKGGYLGPIYHSTRYMCGRCGHKK 334
L G + + CGRC +K
Sbjct: 253 N-----LFKALGAEEVQAETDAFQCGRCKQRK 279
>gi|328351440|emb|CCA37839.1| Transcription elongation factor A protein 2 .l [Komagataella
pastoris CBS 7435]
Length = 329
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 57/119 (47%), Gaps = 9/119 (7%)
Query: 245 TYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERA 304
TY K RS++ NL + NP RR +L + P L+ MS++E+ D ++ ++I K+
Sbjct: 214 TYRNKLRSLIMNLKNKNNPTLRRSILDHEIIPSKLVTMSAQELAPDSLKKEMEEIYKKNL 273
Query: 305 SDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKRI----KCLNCYQYWE 359
D + + + R+ CG+C +K + S+ + + KC NC W+
Sbjct: 274 FDAQGATENNSV-----TDRFECGKCKQRKVSYFQKQTRSADEPLTTFCKCENCGNRWK 327
>gi|238589160|ref|XP_002391938.1| hypothetical protein MPER_08559 [Moniliophthora perniciosa FA553]
gi|215457296|gb|EEB92868.1| hypothetical protein MPER_08559 [Moniliophthora perniciosa FA553]
Length = 125
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 56/129 (43%), Gaps = 11/129 (8%)
Query: 236 FEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRL 295
F G + Y + RS+ NL D NP R V+ G + + L KMSS EM S+ +
Sbjct: 1 FNSHGGASTEYRARIRSLFVNLKDKNNPGLRESVVSGLIAADKLAKMSSAEMASEERQAA 60
Query: 296 NQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IK 350
+Q+IK+E + G + + CGRC +K + Q SA +
Sbjct: 61 DQKIKQE----NFFASLGAEEQQA-ETDAFQCGRCKQRK-CRYRQAQTRSADEPMTTFVT 114
Query: 351 CLNCYQYWE 359
C NC W+
Sbjct: 115 CTNCGNRWK 123
>gi|345324936|ref|XP_003430868.1| PREDICTED: transcription elongation factor A protein 3-like
[Ornithorhynchus anatinus]
Length = 281
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 74/175 (42%), Gaps = 18/175 (10%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVK 249
D R++ E L L KV G+ E G + ++A E ++++ + Y +
Sbjct: 118 DSVRDKCVEMLAAVL-KVDGDYKE------FGVNCEQLASEIEDHIYQELKSTDMKYRNR 170
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYL 309
RS + NL DP NP RR VL G + + +M++EEM SD + L + E + +
Sbjct: 171 VRSRISNLRDPRNPALRRSVLCGGIAASRIARMTAEEMASDELKELRNAMTLEAIREHQM 230
Query: 310 PWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
GG ++ C +C KK + Q SA + C C W+
Sbjct: 231 AKTGGTTTDLFQ-----CSKC-KKKNCTYNQVQTRSADEPMTTFVLCNECGNRWK 279
>gi|50556790|ref|XP_505803.1| YALI0F23815p [Yarrowia lipolytica]
gi|74632309|sp|Q6C0K9.1|BYE1_YARLI RecName: Full=Transcription factor BYE1
gi|49651673|emb|CAG78614.1| YALI0F23815p [Yarrowia lipolytica CLIB122]
Length = 822
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 65/128 (50%), Gaps = 8/128 (6%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIR----VAITAESLMFEKWG---HS 242
D E++R+ AL + V G P + +A+T E +++ +G
Sbjct: 196 DDITEKVRKSAASALKGIFVSVPTSKYSPGAGVSPEQFCETLALTIEQELYDAYGTVEPE 255
Query: 243 FGT-YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKK 301
G+ Y K+R++ FNL D +N R +V+ G V P+ L+ MSSEEM++ ++L ++++
Sbjct: 256 IGSNYRDKFRTLSFNLRDSKNETLRIRVMTGQVTPQTLVAMSSEEMMNPELQKLAEEVRA 315
Query: 302 ERASDRYL 309
E D L
Sbjct: 316 EAIRDTVL 323
>gi|344248661|gb|EGW04765.1| Transcription elongation factor A protein 3 [Cricetulus griseus]
Length = 138
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 43/91 (47%), Gaps = 5/91 (5%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
Y + RS + NL DP NP RR VL G + P + KM++EEM SD R L + +E
Sbjct: 22 YRNRVRSRISNLKDPRNPGLRRNVLSGAISPGLIAKMTAEEMASDELRELRNAMTQEAIR 81
Query: 306 DRYLPWKGGYLGPIYHSTRYMCGRCGHKKTT 336
+ + GG + C +C K T
Sbjct: 82 EHQMAKTGGTTTDLLR-----CSKCKKKNCT 107
>gi|357607939|gb|EHJ65747.1| transcription elongation factor S-II [Danaus plexippus]
Length = 292
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 62/133 (46%), Gaps = 9/133 (6%)
Query: 178 VPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGC-DPIRVAITAESLMF 236
+P D R + RE L +AL K+ GE N C P +A E ++
Sbjct: 117 LPASFPPQSNTTDAVRLKCRELLTQAL-KIDGE-------NPNACATPEELAEDLEECIY 168
Query: 237 EKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLN 296
++ ++ Y+ + RS + NL DP+NP R L G + L KM+ EEM SD ++L
Sbjct: 169 AEFKNTDMRYKNRVRSRVANLKDPKNPTLRTNFLNGVINAARLAKMTPEEMASDEMKKLR 228
Query: 297 QQIKKERASDRYL 309
++ KE D L
Sbjct: 229 EKFIKEAIDDAQL 241
>gi|47215864|emb|CAG02327.1| unnamed protein product [Tetraodon nigroviridis]
Length = 124
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 11/130 (8%)
Query: 235 MFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRR 294
+++++ + Y+ + RS + NL D +NP+ RR VL G++ P+ + MS+EEM S ++
Sbjct: 1 IYQEFKSTEMKYKTRLRSRISNLKDHKNPELRRNVLCGNISPQRIASMSAEEMASAELKQ 60
Query: 295 LNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----I 349
+ + + KE + L GG + ++C C H K + Q SA +
Sbjct: 61 IREALTKESIREHQLSKVGG-----AETDMFICNNC-HGKNCTYTQVQIRSADEPMTTFV 114
Query: 350 KCLNCYQYWE 359
C +C W+
Sbjct: 115 LCNSCGNRWK 124
>gi|254569920|ref|XP_002492070.1| General transcription elongation factor TFIIS [Komagataella
pastoris GS115]
gi|238031867|emb|CAY69790.1| General transcription elongation factor TFIIS [Komagataella
pastoris GS115]
Length = 285
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 57/119 (47%), Gaps = 9/119 (7%)
Query: 245 TYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERA 304
TY K RS++ NL + NP RR +L + P L+ MS++E+ D ++ ++I K+
Sbjct: 170 TYRNKLRSLIMNLKNKNNPTLRRSILDHEIIPSKLVTMSAQELAPDSLKKEMEEIYKKNL 229
Query: 305 SDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKRI----KCLNCYQYWE 359
D + + + R+ CG+C +K + S+ + + KC NC W+
Sbjct: 230 FDAQGATENNSV-----TDRFECGKCKQRKVSYFQKQTRSADEPLTTFCKCENCGNRWK 283
>gi|440896934|gb|ELR48725.1| SPOC domain-containing protein 1, partial [Bos grunniens mutus]
Length = 1171
Score = 55.8 bits (133), Expect = 4e-05, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 42/75 (56%)
Query: 227 VAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEE 286
+A E+ +F + G Y+ KYRS+LFNL DP NP+ KV+ G + P L++MSS +
Sbjct: 581 IAAGIEAALFNLTQATNGRYKTKYRSLLFNLRDPRNPELFLKVVHGDITPHGLVRMSSVQ 640
Query: 287 MVSDGSRRLNQQIKK 301
+ R Q +K
Sbjct: 641 LAPQELARWRDQEEK 655
>gi|119579237|gb|EAW58833.1| hCG1746234, isoform CRA_a [Homo sapiens]
Length = 160
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 56/116 (48%), Gaps = 5/116 (4%)
Query: 221 GCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALI 280
G D + E + + G++ Y+ + +S + NL D +NPD R+ G++ P+ L
Sbjct: 21 GTDEEELGSRTEEAIDPERGNTGMKYKNRVQSKISNLTDAKNPDLRKNAPCGNIPPDLLA 80
Query: 281 KMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTT 336
+M++EEM SD + +++ ++KE + + GG C +C K T
Sbjct: 81 RMTAEEMASDELKEMHKNLRKEAIREHQMAKTGG-----TQPDSLTCAKCKKKNCT 131
>gi|327276421|ref|XP_003222968.1| PREDICTED: transcription elongation factor A protein 2-like [Anolis
carolinensis]
Length = 209
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 78/174 (44%), Gaps = 9/174 (5%)
Query: 186 IKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGT 245
I C D R + RE L +L + V G D +A E +++ ++
Sbjct: 39 ITC-DTVRSKCREMLTSSLQTDNDYV-------AIGADCEEMAAQIEEFIYQDVKNTDLK 90
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
Y+ + RS + NL D +NPD R+ VL G + PE + M+SEEM S+ + + + + KE
Sbjct: 91 YKNRVRSHISNLKDSKNPDLRKNVLCGVITPEEIAVMTSEEMASNELKEIWKAMTKEAIR 150
Query: 306 DRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKRIKCLNCYQYWE 359
+ + GG ++ + C + + +D+ + + C C +W+
Sbjct: 151 EHQMAKTGGTQTDLFTCRKCRKKNCTYTQVQTRSSDEPMTT-FVVCNECGNHWK 203
>gi|331242717|ref|XP_003334004.1| hypothetical protein PGTG_15734 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309312994|gb|EFP89585.1| hypothetical protein PGTG_15734 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 382
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 57/128 (44%), Gaps = 19/128 (14%)
Query: 241 HSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIK 300
H Y++K RS++FNL D NP R V+ G + L M ++M S+
Sbjct: 263 HDSNGYKIKMRSLIFNLRDKNNPGLRESVVSGEISAGRLCVMGPQDMASE---------- 312
Query: 301 KERASDRYLP----WKGGYLGPIYHST-RYMCGRCGHKKTTNHGNDQNSSAKR----IKC 351
+ +A DR L +K GP T + C RCG +K T + S+ + + C
Sbjct: 313 ERKAQDRKLAEENLFKARGAGPQQAETDAFRCARCGQRKCTYYQMQTRSADEPMTTFVTC 372
Query: 352 LNCYQYWE 359
+NC W+
Sbjct: 373 VNCNCRWK 380
>gi|363741478|ref|XP_001234737.2| PREDICTED: death-inducer obliterator 1 [Gallus gallus]
Length = 2152
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 13/128 (10%)
Query: 172 KPASAVVP------QKLVSMI----KCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNG 221
+PA + VP Q VS I + N R+ IR L + L K + D+ V +
Sbjct: 733 RPAPSSVPTASGSSQVKVSAIPIQSQPNSQIRQNIRRSLKEILWKRVNDSDDLV---MTE 789
Query: 222 CDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIK 281
+ +VA+ E MF + + Y+ KYRSI+FNL DP+N +VL G + L++
Sbjct: 790 SEVGKVALNIEKEMFNLFHVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLHGEISLSKLVR 849
Query: 282 MSSEEMVS 289
M EE++S
Sbjct: 850 MKPEELLS 857
>gi|195437119|ref|XP_002066492.1| GK18066 [Drosophila willistoni]
gi|194162577|gb|EDW77478.1| GK18066 [Drosophila willistoni]
Length = 319
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 74/176 (42%), Gaps = 21/176 (11%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESL-MFEKWGHSFGTYEV 248
D R + RE L AL GEV E GC ++ ++ ++ Y+
Sbjct: 157 DAVRLKCREMLTTALK--IGEVPE-------GCAEPEEMAAELEEAIYSEFKNTDMKYKN 207
Query: 249 KYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRY 308
+ RS + NL DP+NP R + G V + L KM+ EEM SD ++L ++ KE +D
Sbjct: 208 RIRSRVANLKDPKNPGLRGNFMCGAVSAKQLAKMTPEEMASDEMKKLREKFVKEAINDAQ 267
Query: 309 LPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
L G + CG+C K+ + Q SA + C C W+
Sbjct: 268 LATVQGTKTDLLK-----CGKC-KKRNCTYNQLQTRSADEPMTTFVMCNECGNRWK 317
>gi|255730739|ref|XP_002550294.1| hypothetical protein CTRG_04592 [Candida tropicalis MYA-3404]
gi|240132251|gb|EER31809.1| hypothetical protein CTRG_04592 [Candida tropicalis MYA-3404]
Length = 312
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 66/140 (47%), Gaps = 10/140 (7%)
Query: 225 IRVAITAESLMFE-KWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMS 283
+++A ES +F+ ++ TY K RS NL + +NP+ R ++L + A IKM+
Sbjct: 176 LKIATEIESEVFKSQYSRVDDTYRNKLRSFTMNLRNKKNPELRERILTKQITAAAFIKMT 235
Query: 284 SEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQN 343
+EM + + +++ K+ D G + R+ CG+C HKK + +
Sbjct: 236 PKEMAPEALKLEIEKLHKQNLFD-----AQGATEKRAVTDRFTCGKCKHKKVSYYQMQTR 290
Query: 344 SSAKRI----KCLNCYQYWE 359
S+ + + C NC W+
Sbjct: 291 SADEPLTTFCTCENCGNRWK 310
>gi|170111316|ref|XP_001886862.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164638220|gb|EDR02499.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 294
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 72/170 (42%), Gaps = 10/170 (5%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVK 249
D R++ E +Y AL+ SG E + ++ A E+ + Y+ K
Sbjct: 133 DSTRDKCTELIYDALASDSGAPVELI---------LKHAKAIEASVLADCDGVTAAYKSK 183
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYL 309
RS+ NL D NP R ++ G ++ E KM+S+EM S+ + + +I+ E +
Sbjct: 184 IRSLFVNLKDKSNPSLRESIVSGELQAEKFTKMTSQEMASEERKAADNKIRAENFHNSLA 243
Query: 310 PWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKRIKCLNCYQYWE 359
+ + +R +C +++ D+ + + C NC W+
Sbjct: 244 AAEQQAETDAFQCSRCKQRKCRYRQAQTRSADEPMTT-FVTCTNCGNRWK 292
>gi|301777208|ref|XP_002924013.1| PREDICTED: SPOC domain-containing protein 1-like [Ailuropoda
melanoleuca]
Length = 1182
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 227 VAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEE 286
+A E+ +F+ + Y+ KYRS+LFNL DP NPD KV+ G V P L++MS+ +
Sbjct: 593 IAAGIETALFDLTQATSCRYKTKYRSLLFNLRDPRNPDLFLKVVQGDVTPHDLVRMSTAQ 652
Query: 287 MV 288
+
Sbjct: 653 LA 654
>gi|119470088|ref|XP_001258016.1| PHD finger domain protein, putative [Neosartorya fischeri NRRL 181]
gi|119406168|gb|EAW16119.1| PHD finger domain protein, putative [Neosartorya fischeri NRRL 181]
Length = 884
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 86/168 (51%), Gaps = 28/168 (16%)
Query: 140 APRSKKLVGSEFIVTEETNSLDNVDAEAIREEKPASAVVPQKLVSMIKCNDYFRERIREK 199
AP S++ SE T+E+ +LD + A R ASA+V KL F ++I +
Sbjct: 259 APPSRQSSVSEKTATQESGTLDEISNPARRSA--ASALV--KL---------FVDQISDA 305
Query: 200 LYKALSKVS-GEVDEEVQDKLNGCDPIRVAITAESLMFEKW----GHSFGTYEVKYRSIL 254
+ K+ G +E+ +L + E M++ G Y+++ R+IL
Sbjct: 306 QKQGFFKLPEGRSAKEIAQQL--------GFSIEKAMYQNICGGSGEPTEPYKLQLRTIL 357
Query: 255 FNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKE 302
FN+ +NP R ++L+G + P+AL KMSS++M S+ ++ + +IK+E
Sbjct: 358 FNVK--KNPSLRDRLLVGSLLPDALSKMSSQDMASEELQQKDAEIKRE 403
>gi|351709942|gb|EHB12861.1| SPOC domain-containing protein 1 [Heterocephalus glaber]
Length = 1116
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 43/75 (57%)
Query: 227 VAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEE 286
+A E+ +F+ + Y++KYRS+LFNL DP NPD KV+ G V P L++M+S +
Sbjct: 550 IAAGIEAALFDLTQGTSCRYKIKYRSLLFNLRDPRNPDLFLKVVHGDVTPHDLVRMNSVQ 609
Query: 287 MVSDGSRRLNQQIKK 301
+ R Q +K
Sbjct: 610 LAPQELARWRDQEEK 624
>gi|408389619|gb|EKJ69057.1| hypothetical protein FPSE_10756 [Fusarium pseudograminearum CS3096]
Length = 308
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 72/164 (43%), Gaps = 20/164 (12%)
Query: 200 LYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMD 259
+Y L+ S + EV +K AIT E+ F K+ Y+ K RS+ NL +
Sbjct: 157 IYNGLAYRSTASENEVVNK---------AITVENAAFVKFKGETADYKKKIRSLFTNLKN 207
Query: 260 PENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPI 319
N + + VL G + PE + MS +E+ S+ R+ +++KE +P + +
Sbjct: 208 KSNKELGKSVLSGEISPEKFVVMSDDELKSEEQRKKELELEKENMKMAQVPQEQKSI--- 264
Query: 320 YHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYW 358
S CG+C KK ++ Q +A +C+ C W
Sbjct: 265 --SESLECGKC-KKKQVSYTQAQTRAADEPMTTFCECMACGNRW 305
>gi|355761436|gb|EHH61803.1| hypothetical protein EGM_19926 [Macaca fascicularis]
Length = 344
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 76/184 (41%), Gaps = 30/184 (16%)
Query: 173 PASAVVP---QKLVSMIKC---NDYFRERIREKLYKAL-------------SKVSGEVDE 213
P+S + P + + C D R++ E L AL K++ E+++
Sbjct: 143 PSSPLTPTFASSICLLAPCYLTGDSVRDKCVEMLSAALKADDDYKDYGVNCDKMASEIED 202
Query: 214 EVQDKLNGCDPI-RVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLG 272
+ + GC + R+A + L Y + RS + NL DP NP RR VL G
Sbjct: 203 HILELCQGCGCLDRLAAPLQELKSTDM-----KYRNRVRSRISNLKDPRNPGLRRNVLSG 257
Query: 273 HVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGH 332
+ + KM++EEM SD R L + +E + + GG ++ C +C
Sbjct: 258 AISAGLIAKMTAEEMASDELRELRNAMTQEAIREHQMAKTGGTTTDLFQ-----CSKCKK 312
Query: 333 KKTT 336
K T
Sbjct: 313 KNCT 316
>gi|46108040|ref|XP_381078.1| hypothetical protein FG00902.1 [Gibberella zeae PH-1]
Length = 307
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 72/164 (43%), Gaps = 20/164 (12%)
Query: 200 LYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMD 259
+Y L+ S + EV +K AIT E+ F K+ Y+ K RS+ NL +
Sbjct: 156 IYNGLAYRSTASENEVVNK---------AITVENAAFVKFKGETADYKKKIRSLFTNLKN 206
Query: 260 PENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPI 319
N + + VL G + PE + MS +E+ S+ R+ +++KE +P + +
Sbjct: 207 KSNKELGKSVLSGEISPEKFVVMSDDELKSEEQRKKELELEKENMKMAQVPQEQKSI--- 263
Query: 320 YHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYW 358
S CG+C KK ++ Q +A +C+ C W
Sbjct: 264 --SESLECGKC-KKKQVSYTQAQTRAADEPMTTFCECMACGNRW 304
>gi|326931937|ref|XP_003212080.1| PREDICTED: death-inducer obliterator 1-like [Meleagris gallopavo]
Length = 2496
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 64/128 (50%), Gaps = 13/128 (10%)
Query: 172 KPASAVVP------QKLVSMI----KCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNG 221
+PA + VP Q VS + + N R+ IR L + L K + D+ V +
Sbjct: 820 RPAPSSVPTASGSSQVKVSAVPIQSQPNSQIRQNIRRSLKEILWKRVNDSDDLV---MTE 876
Query: 222 CDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIK 281
+ +VA+ E MF + + Y+ KYRSI+FNL DP+N +VL G + L++
Sbjct: 877 SEVGKVALNIEKEMFNLFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLHGEISLSKLVR 936
Query: 282 MSSEEMVS 289
M EE++S
Sbjct: 937 MKPEELLS 944
>gi|334328236|ref|XP_003341053.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor A
protein 3-like [Monodelphis domestica]
Length = 487
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 74/171 (43%), Gaps = 8/171 (4%)
Query: 189 NDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEV 248
D R++ E L AL ++D++ ++ CD ++A E + + + Y
Sbjct: 189 GDSVRDKCVEMLSAAL-----KMDDDYKEYGVNCD--KMASEIEDHILSELKGTDMKYRN 241
Query: 249 KYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRY 308
+ RS + NL DP NP+ RR VL G + + +M++EEM SD + L + E +
Sbjct: 242 RVRSRISNLKDPRNPNLRRNVLCGAISTSLIARMTAEEMASDELKELRNAMTLEAIREHQ 301
Query: 309 LPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKRIKCLNCYQYWE 359
+ GG ++ + C + + D+ + + C C W+
Sbjct: 302 MAKTGGTTTDLFQCXKCKKKNCTYNQVQTRSADEPMTT-FVLCNECGNRWK 351
>gi|321468633|gb|EFX79617.1| hypothetical protein DAPPUDRAFT_244816 [Daphnia pulex]
Length = 2274
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 226 RVAITAESLMFEKWGHSFGT-YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSS 284
+VA E +F + H G+ Y+ KYRS++FN+ DP+NP R+++ + P+ L+KMS+
Sbjct: 1739 QVAKEIEESLFSLYKHDVGSKYKNKYRSLIFNIKDPKNPGLFREIITKQLLPDELVKMST 1798
Query: 285 EEMVS 289
E++ +
Sbjct: 1799 EDLAN 1803
>gi|431891278|gb|ELK02155.1| Zinc finger protein 436 [Pteropus alecto]
Length = 622
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 52/118 (44%), Gaps = 11/118 (9%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
Y + RS + NL DP NP RR VL G + E + KM++EEM SD R L + +E
Sbjct: 3 YRNRVRSRISNLKDPRNPGLRRNVLSGAISAELIAKMTAEEMASDELRELRNAMTQEAIR 62
Query: 306 DRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYW 358
+ + GG + + C +C KK + Q SA + C C W
Sbjct: 63 EHQMAKTGGTTTDL-----FQCSKCK-KKNCTYNQVQTRSADEPMTTFVLCNECGNRW 114
>gi|390597425|gb|EIN06825.1| transcription elongation factor [Punctularia strigosozonata
HHB-11173 SS5]
Length = 320
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 75/182 (41%), Gaps = 20/182 (10%)
Query: 183 VSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHS 242
+SM +D R++ E +Y AL+ S + V + G ES + ++ +
Sbjct: 152 ISMDVTSDKTRDKCIELIYDALASDSSAPADLVLKRARGI---------ESDVLSQFRTT 202
Query: 243 FGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKE 302
Y+ K RS NL D NP R V+ G + E KM+S +M S+ R +Q+I++E
Sbjct: 203 GAEYKAKIRSFFVNLKDKNNPGLRAAVVSGELPVEKFAKMTSADMASEERRAQDQKIREE 262
Query: 303 RASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQY 357
L G + + C RC +K + Q SA + C C
Sbjct: 263 N-----LFQSLGAEEQQAETDAFQCSRCKQRK-CRYRQAQTRSADEPMTTFVTCTVCNNR 316
Query: 358 WE 359
W+
Sbjct: 317 WK 318
>gi|261203309|ref|XP_002628868.1| transcription elongation factor S-II [Ajellomyces dermatitidis
SLH14081]
gi|239586653|gb|EEQ69296.1| transcription elongation factor S-II [Ajellomyces dermatitidis
SLH14081]
gi|239608307|gb|EEQ85294.1| transcription elongation factor S-II [Ajellomyces dermatitidis
ER-3]
Length = 303
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 65/150 (43%), Gaps = 16/150 (10%)
Query: 219 LNGCDPIRV----AITAESLMFEKWG-HSFGTYEVKYRSILFNLMDPENPDFRRKVLLGH 273
LN +P R+ AI E + G + Y K RS+ NL + NP R +VL
Sbjct: 158 LNSTEPPRIVLQKAIEVELAAYTCLGPETKEQYRTKMRSLFQNLKNKSNPGLRVRVLSNE 217
Query: 274 VKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHK 333
V E ++M+ +E+ SD R ++I KE D+ + K ST CG+CG +
Sbjct: 218 VTAEKFVRMTHDELKSDAQREEERRIHKENM-DKAMVAKAER----SVSTSLQCGKCGQR 272
Query: 334 KTTNHGNDQNSSAKR-----IKCLNCYQYW 358
K T + Q SA C C + W
Sbjct: 273 KVT-YTEAQTRSADEPMTLFCTCTVCGKSW 301
>gi|354488913|ref|XP_003506610.1| PREDICTED: transcription elongation factor A protein 1-like
[Cricetulus griseus]
Length = 318
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 66/144 (45%), Gaps = 11/144 (7%)
Query: 221 GCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALI 280
G D + E ++++ ++ Y+ + RS + D +NP+ R+ VL G++ P+
Sbjct: 179 GADEEELGSQIEEAIYQEIRNTDMKYKNRVRSRISVPKDAKNPNLRKNVLCGNIPPDLFA 238
Query: 281 KMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGN 340
+M++EEM SD + + + + KE + + GG + + CG+C KK +
Sbjct: 239 RMTAEEMASDELKEMRKNLTKEAIREHQMAKTGG-----TQTDLFTCGKC-KKKNCTYTQ 292
Query: 341 DQNSSAKR-----IKCLNCYQYWE 359
Q SA + C C W+
Sbjct: 293 VQTRSADEPMTTFVVCNECGNRWK 316
>gi|351700633|gb|EHB03552.1| Transcription elongation factor A protein 3 [Heterocephalus glaber]
Length = 343
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 79/171 (46%), Gaps = 14/171 (8%)
Query: 194 ERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVKYRSI 253
+ +R+K + LS V+ + +++ ++ CD ++A E ++++ + Y + RS
Sbjct: 180 DSVRDKCVEMLS-VALKAEDDYKNYGVNCD--KMASEIEDHIYQELKSTDMKYRNRVRSR 236
Query: 254 LFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYLPWKG 313
+ NL D +NP RR VL G + E + KM +EEM SD R L + +E + +
Sbjct: 237 ISNLKDSKNPGLRRNVLSGAISTELIAKMMAEEMASDELRELRNAMTQEAIREHQMAKTS 296
Query: 314 GYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
G ++ CG+C KK + Q SA + C C W+
Sbjct: 297 G-----TNTDLLQCGKC-KKKNCTYNQVQTLSADEPMTTFVLCNECGHRWK 341
>gi|328709087|ref|XP_001946550.2| PREDICTED: hypothetical protein LOC100167834 [Acyrthosiphon pisum]
Length = 1750
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 74/135 (54%), Gaps = 7/135 (5%)
Query: 156 ETNSLDNVDA-EAIREEKPASAVVPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEE 214
+T SL ++A + + ++KP +++ + K + R +R+ L ++LS + EE
Sbjct: 955 KTTSLSKINAVQKVIKKKPEPV---KEIFNEKKGEEQLRSNVRKSLLESLS---SRISEE 1008
Query: 215 VQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHV 274
+ K D + + E ++ ++ Y+ KYRS+LFN+ DP+N +F +K++ V
Sbjct: 1009 PELKTAEQDLEELILKIEEELYNQFSKVDQKYKTKYRSLLFNIKDPKNLNFFKKIMFKWV 1068
Query: 275 KPEALIKMSSEEMVS 289
P L++M+++EM S
Sbjct: 1069 TPYQLVRMTADEMAS 1083
>gi|294656076|ref|XP_458316.2| DEHA2C14564p [Debaryomyces hansenii CBS767]
gi|199430838|emb|CAG86394.2| DEHA2C14564p [Debaryomyces hansenii CBS767]
Length = 290
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 9/118 (7%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
Y K R+ NL + +NPD R ++L +KP IKM+ EM + ++ +++ K+
Sbjct: 176 YRNKLRTFTMNLRNKKNPDLRDRLLTNKIKPSNFIKMTPNEMAPESLKKEIEKLHKQNLF 235
Query: 306 DRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKRI----KCLNCYQYWE 359
D G + R+ CG+C HKK + + S+ + + C NC W+
Sbjct: 236 D-----AQGATEKRAVTDRFTCGKCKHKKVSYYQMQTRSADEPLTTFCTCENCGNRWK 288
>gi|300120236|emb|CBK19790.2| unnamed protein product [Blastocystis hominis]
Length = 285
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 34/50 (68%)
Query: 245 TYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRR 294
+Y K R+ILFNL DP+NPD R ++ G ++PE L M+++EM S R+
Sbjct: 26 SYNAKLRNILFNLSDPKNPDLRNRIFSGELEPERLPIMTNDEMASSEMRK 75
>gi|47220832|emb|CAG00039.1| unnamed protein product [Tetraodon nigroviridis]
Length = 424
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 54/119 (45%), Gaps = 11/119 (9%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
Y+ + RS + NL DP+NP R+ VL G + + MS+EEM SD ++L + +E
Sbjct: 310 YKNRVRSRISNLKDPKNPGLRKNVLAGTIALSRIASMSAEEMASDELKQLRNTLTQEAIR 369
Query: 306 DRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
+ + GG + CG+C KK + Q SA + C C W+
Sbjct: 370 EHQMAKTGGTTTDLLQ-----CGKC-KKKNCTYNQVQTRSADEPMTTFVLCNECGNRWK 422
>gi|302833984|ref|XP_002948555.1| hypothetical protein VOLCADRAFT_88764 [Volvox carteri f.
nagariensis]
gi|300266242|gb|EFJ50430.1| hypothetical protein VOLCADRAFT_88764 [Volvox carteri f.
nagariensis]
Length = 1482
Score = 54.7 bits (130), Expect = 7e-05, Method: Composition-based stats.
Identities = 37/123 (30%), Positives = 62/123 (50%), Gaps = 4/123 (3%)
Query: 189 NDYFRERIREKLYKALSKVSGEVDEE-VQDKLNGCDPIRVAITAESLMFEKWGHSFGT-Y 246
+D R ++RE+L AL + E+ E + L DP VA E+ +++ +S Y
Sbjct: 404 DDEVRSKVREQLASALQRALDELKAEGYTEALP--DPAAVAADVETELYKLHDNSVSKDY 461
Query: 247 EVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASD 306
+ K+RS+ FNL D NP+ R +VL G + P L+ + E+ Q+ ++E A
Sbjct: 462 KAKFRSLSFNLRDNGNPELRARVLRGELPPPRLVTLGPAELARKELSEWRQKRQEEAAKM 521
Query: 307 RYL 309
+L
Sbjct: 522 VFL 524
>gi|392339728|ref|XP_003753889.1| PREDICTED: death-inducer obliterator 1 [Rattus norvegicus]
gi|392346978|ref|XP_003749689.1| PREDICTED: death-inducer obliterator 1 [Rattus norvegicus]
Length = 2258
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 72/151 (47%), Gaps = 15/151 (9%)
Query: 143 SKKLVGSEFIVTEETNSLDNVDAEAIREEKPASAVVPQKLVSMIKC----NDYFRERIRE 198
SKKL GS +V + + + PA++ VP +L + N R+ IR
Sbjct: 624 SKKLPGSAAVV--------GIARKPMSANVPAASPVPGRLGPVSPAPSQPNSQIRQNIRR 675
Query: 199 KLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLM 258
L + L K + D+ + + + ++A+ E MF + + Y+ KYRSI+FNL
Sbjct: 676 SLKEILWKRVNDSDDLI---MTENEVGKIALHIEKEMFNLFQVTDNRYKSKYRSIMFNLK 732
Query: 259 DPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
DP+N +VL + L++M EE+VS
Sbjct: 733 DPKNQGLFHRVLREEISLAKLVRMKPEELVS 763
>gi|149034011|gb|EDL88794.1| death associated transcription factor 1 (predicted), isoform CRA_b
[Rattus norvegicus]
Length = 2099
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 72/151 (47%), Gaps = 15/151 (9%)
Query: 143 SKKLVGSEFIVTEETNSLDNVDAEAIREEKPASAVVPQKLVSMIKC----NDYFRERIRE 198
SKKL GS +V + + + PA++ VP +L + N R+ IR
Sbjct: 465 SKKLPGSAAVV--------GIARKPMSANVPAASPVPGRLGPVSPAPSQPNSQIRQNIRR 516
Query: 199 KLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLM 258
L + L K + D+ + + + ++A+ E MF + + Y+ KYRSI+FNL
Sbjct: 517 SLKEILWKRVNDSDDLI---MTENEVGKIALHIEKEMFNLFQVTDNRYKSKYRSIMFNLK 573
Query: 259 DPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
DP+N +VL + L++M EE+VS
Sbjct: 574 DPKNQGLFHRVLREEISLAKLVRMKPEELVS 604
>gi|170036777|ref|XP_001846238.1| transcription elongation factor S-II [Culex quinquefasciatus]
gi|167879681|gb|EDS43064.1| transcription elongation factor S-II [Culex quinquefasciatus]
Length = 301
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 74/175 (42%), Gaps = 18/175 (10%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCD-PIRVAITAESLMFEKWGHSFGTYEV 248
D R + RE L A+ +V GE E GC P + E +F ++ ++ Y+
Sbjct: 138 DAVRLKCREMLASAI-RVDGEPPE-------GCQTPEELGDELEEAIFSEFRNTDMKYKN 189
Query: 249 KYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRY 308
+ RS + NL D +NP R + G + + L KM+ EEM SD + L + KE +D
Sbjct: 190 RVRSRVANLKDLKNPSLRSNYINGAITAQRLAKMTPEEMASDEMKNLRDRFVKEAINDAQ 249
Query: 309 LPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSS----AKRIKCLNCYQYWE 359
L G + CG+C + T + SS + C C W+
Sbjct: 250 LATNQGTKTDLLK-----CGKCKKRNCTYNQLQTRSSDEPMTTFVLCNECGNRWK 299
>gi|51571541|ref|NP_808520.2| death-inducer obliterator 1 isoform 2 [Mus musculus]
gi|187951163|gb|AAI38714.1| Death inducer-obliterator 1 [Mus musculus]
gi|187952021|gb|AAI38713.1| Death inducer-obliterator 1 [Mus musculus]
Length = 1183
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 71/151 (47%), Gaps = 15/151 (9%)
Query: 143 SKKLVGSEFIVTEETNSLDNVDAEAIREEKPASAVVPQKLVSMIKC----NDYFRERIRE 198
SKKL GS +V V + + PA++ P +L + N R+ IR
Sbjct: 622 SKKLPGSAAVV--------GVTRKPMSANVPAASPAPGRLGPVSPAPSQPNSQIRQNIRR 673
Query: 199 KLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLM 258
L + L K + D+ + + + ++A+ E MF + + Y+ KYRSI+FNL
Sbjct: 674 SLKEILWKRVNDSDDLI---MTENEVGKIALHIEKEMFNLFQVTDNRYKSKYRSIMFNLK 730
Query: 259 DPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
DP+N +VL + L++M EE+VS
Sbjct: 731 DPKNQGLFHRVLREEISLAKLVRMKPEELVS 761
>gi|395526680|ref|XP_003765486.1| PREDICTED: uncharacterized protein LOC100925432 [Sarcophilus
harrisii]
Length = 1362
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 9/121 (7%)
Query: 170 EEKPASAVVPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIR-VA 228
+EKP P +S + + +RE L K L +E + G + +R +A
Sbjct: 750 KEKPLPGPAPPLQLSGEQVRSAVADSLREVLLKRL--------QEPANLTVGEEAVRGIA 801
Query: 229 ITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMV 288
E+ +F+ + Y+ KYRS++FNL DP N D +V+ G + P+ L++MS+ E+
Sbjct: 802 ANIEAAIFDLMQCTDYRYKTKYRSLVFNLRDPRNKDLFLQVIRGDITPQGLVRMSATELA 861
Query: 289 S 289
S
Sbjct: 862 S 862
>gi|410920567|ref|XP_003973755.1| PREDICTED: LOW QUALITY PROTEIN: death-inducer obliterator 1-like
[Takifugu rubripes]
Length = 2311
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 189 NDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEV 248
N+ R+ IR L L K + D+ K+ + R+A E MF ++ Y+
Sbjct: 639 NNQMRQNIRRSLTDILYKRVSDSDDL---KMTESEVGRLAFAIEKEMFNLCLNTDSKYKN 695
Query: 249 KYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
KYRS++FNL DP+N +V+ G V P L+++S+EE++S
Sbjct: 696 KYRSLMFNLKDPKNKGLFYRVIGGDVTPFRLVRLSAEELLS 736
>gi|37359898|dbj|BAC97927.1| mKIAA0333 protein [Mus musculus]
Length = 1201
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 71/151 (47%), Gaps = 15/151 (9%)
Query: 143 SKKLVGSEFIVTEETNSLDNVDAEAIREEKPASAVVPQKLVSMIKC----NDYFRERIRE 198
SKKL GS +V V + + PA++ P +L + N R+ IR
Sbjct: 640 SKKLPGSAAVV--------GVTRKPMSANVPAASPAPGRLGPVSPAPSQPNSQIRQNIRR 691
Query: 199 KLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLM 258
L + L K + D+ + + + ++A+ E MF + + Y+ KYRSI+FNL
Sbjct: 692 SLKEILWKRVNDSDDLI---MTENEVGKIALHIEKEMFNLFQVTDNRYKSKYRSIMFNLK 748
Query: 259 DPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
DP+N +VL + L++M EE+VS
Sbjct: 749 DPKNQGLFHRVLREEISLAKLVRMKPEELVS 779
>gi|291399294|ref|XP_002716071.1| PREDICTED: KIAA1710 protein-like [Oryctolagus cuniculus]
Length = 789
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 58/137 (42%), Gaps = 18/137 (13%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
Y + RS + NL DP NP RR VL G + + KM++EEM SD R L + +E
Sbjct: 97 YRNRVRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDELRELRNAMTQEAIR 156
Query: 306 DRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWES 360
+ + GG + + C +C KK + Q SA + C C W+
Sbjct: 157 EHQMAKTGGTTTDL-----FQCSKC-KKKNCTYNQVQTRSADEPMTTFVLCNECGNRWKR 210
Query: 361 T-------TALYGLLPV 370
+ + L LPV
Sbjct: 211 SLGKSRNCSELLAALPV 227
>gi|146423462|ref|XP_001487659.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 213
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 74/165 (44%), Gaps = 19/165 (11%)
Query: 200 LYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMF-EKWGHSFGTYEVKYRSILFNLM 258
LY AL+ + E++ D VA E +F +++ Y K R++ NL
Sbjct: 61 LYTALAIERDDPSEKILD---------VARNIELGVFKQEYSAVNDAYRNKLRTLTMNLR 111
Query: 259 DPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGP 318
+ +NPD R ++L G + P I M+ EM + L Q+I E+ + + L G
Sbjct: 112 NKKNPDLRDRLLTGQIAPSKFITMNPNEMAPES---LKQEI--EKLNKQNLFDAQGATEK 166
Query: 319 IYHSTRYMCGRCGHKKTTNHGNDQNSSAKRI----KCLNCYQYWE 359
+ R+ CG+C HKK + + S+ + + C NC W+
Sbjct: 167 RAVTDRFTCGKCKHKKVSYYQMQTRSADEPLTTFCTCENCGNRWK 211
>gi|426222699|ref|XP_004005523.1| PREDICTED: SPOC domain-containing protein 1 [Ovis aries]
Length = 1255
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%)
Query: 227 VAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEE 286
+A E+ +F + Y+ KYRS+LFNL DP NP+ KV+ G + P L++MSS +
Sbjct: 696 IAAGIEAALFNLTQATNSRYKTKYRSLLFNLRDPRNPELFLKVVHGDITPHGLVRMSSVQ 755
Query: 287 MV 288
+
Sbjct: 756 LA 757
>gi|409041587|gb|EKM51072.1| hypothetical protein PHACADRAFT_263043 [Phanerochaete carnosa
HHB-10118-sp]
Length = 303
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 72/175 (41%), Gaps = 20/175 (11%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVK 249
D R++ E +Y AL+ SG E++ K AI A +L G Y+ K
Sbjct: 142 DATRDKCLELIYDALAFDSGAPSEQILGKAK-------AIEAAALTDN--GGVTAAYKAK 192
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYL 309
R++ NL D NP R V+ G + KM+S EM S+ + + +I++E L
Sbjct: 193 IRTLFVNLKDKNNPGLRESVVAGDLPVTRFCKMTSAEMASEERKAADNRIREEN-----L 247
Query: 310 PWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
G + + CGRC +K + Q SA + C C W+
Sbjct: 248 FKTLGAEEVQAETDAFQCGRCKQRK-CRYRQAQTRSADEPMTTFVTCTVCNNRWK 301
>gi|196008633|ref|XP_002114182.1| predicted protein [Trichoplax adhaerens]
gi|190583201|gb|EDV23272.1| predicted protein [Trichoplax adhaerens]
Length = 996
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 191 YFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVKY 250
++ +RE +YKA + +V E++ +++ + I E +F + + Y+ KY
Sbjct: 498 HYDSPVRENIYKAFRDILSKVAEKIAIQMSVVSKLSKDI--EEQLFNLFNDTGSRYKNKY 555
Query: 251 RSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
RS+ FNL D +N ++L G + P L++M+SEE+ +
Sbjct: 556 RSLSFNLKDEKNKALVERILHGDISPSKLVRMTSEELAN 594
>gi|190345115|gb|EDK36938.2| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 213
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 74/165 (44%), Gaps = 19/165 (11%)
Query: 200 LYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMF-EKWGHSFGTYEVKYRSILFNLM 258
LY AL+ + E++ D VA E +F +++ Y K R++ NL
Sbjct: 61 LYTALAIERDDPSEKILD---------VARNIELGVFKQEYSAVNDAYRNKLRTLTMNLR 111
Query: 259 DPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGP 318
+ +NPD R ++L G + P I M+ EM + L Q+I E+ + + L G
Sbjct: 112 NKKNPDLRDRLLTGQIAPSKFITMNPNEMAPES---LKQEI--EKLNKQNLFDAQGATEK 166
Query: 319 IYHSTRYMCGRCGHKKTTNHGNDQNSSAKRI----KCLNCYQYWE 359
+ R+ CG+C HKK + + S+ + + C NC W+
Sbjct: 167 RAVTDRFTCGKCKHKKVSYYQMQTRSADEPLTTFCTCENCGNRWK 211
>gi|298713146|emb|CBJ26902.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 437
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 64/147 (43%), Gaps = 20/147 (13%)
Query: 224 PIRVAITAESLMFEKWGHSFG-TYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKM 282
P A E +F G S Y+ K R + FNL +N R ++L G + P L++M
Sbjct: 299 PASKAKEVEDAIFALCGGSVTKAYKAKAREMSFNLRVGKNDPLRERLLSGSLLPSDLVRM 358
Query: 283 SSEEMVSDGSRRLNQQIKKER----ASDRYLPWKGGYLGPIYHST--RYMCGRCGHKKTT 336
SS ++ RR ++ ++R S R P +H+ R+ C CGH+KT
Sbjct: 359 SSNDLAPLSVRRERERFARKRIREVTSSRDSP---------FHTVTDRFACVECGHEKTQ 409
Query: 337 NHGNDQNSSAKRIK----CLNCYQYWE 359
+ + R++ CL C WE
Sbjct: 410 YRTWRRKAVVDRVRVIVQCLQCRHSWE 436
>gi|431894648|gb|ELK04448.1| Transcription elongation factor A protein 2 [Pteropus alecto]
Length = 269
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
Y+ + RS + NL D +NP RR+VL G + P+ + M+SEEM SD + + + + KE
Sbjct: 3 YKNRVRSRISNLKDAKNPGLRRQVLCGSITPQQIAVMTSEEMASDELKEIRKAMTKEAIR 62
Query: 306 DRYLPWKGGYLGPIYHSTRYMCGRCGHKKTT 336
+ + GG + + CG+C K T
Sbjct: 63 EHQMARTGG-----TQTDLFTCGKCRKKNCT 88
>gi|76096375|ref|NP_780760.2| death-inducer obliterator 1 isoform 3 [Mus musculus]
gi|152031593|sp|Q8C9B9.4|DIDO1_MOUSE RecName: Full=Death-inducer obliterator 1; Short=DIO-1; AltName:
Full=Death-associated transcription factor 1;
Short=DATF-1
Length = 2256
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 71/151 (47%), Gaps = 15/151 (9%)
Query: 143 SKKLVGSEFIVTEETNSLDNVDAEAIREEKPASAVVPQKLVSMIKC----NDYFRERIRE 198
SKKL GS +V V + + PA++ P +L + N R+ IR
Sbjct: 622 SKKLPGSAAVV--------GVTRKPMSANVPAASPAPGRLGPVSPAPSQPNSQIRQNIRR 673
Query: 199 KLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLM 258
L + L K + D+ + + + ++A+ E MF + + Y+ KYRSI+FNL
Sbjct: 674 SLKEILWKRVNDSDDLI---MTENEVGKIALHIEKEMFNLFQVTDNRYKSKYRSIMFNLK 730
Query: 259 DPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
DP+N +VL + L++M EE+VS
Sbjct: 731 DPKNQGLFHRVLREEISLAKLVRMKPEELVS 761
>gi|148675399|gb|EDL07346.1| death inducer-obliterator 1, isoform CRA_a [Mus musculus]
Length = 2056
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 72/151 (47%), Gaps = 15/151 (9%)
Query: 143 SKKLVGSEFIVTEETNSLDNVDAEAIREEKPASAVVPQKL----VSMIKCNDYFRERIRE 198
SKKL GS +V V + + PA++ P +L + + N R+ IR
Sbjct: 465 SKKLPGSAAVV--------GVTRKPMSANVPAASPAPGRLGPVSPAPSQPNSQIRQNIRR 516
Query: 199 KLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLM 258
L + L K + D+ + + + ++A+ E MF + + Y+ KYRSI+FNL
Sbjct: 517 SLKEILWKRVNDSDDLI---MTENEVGKIALHIEKEMFNLFQVTDNRYKSKYRSIMFNLK 573
Query: 259 DPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
DP+N +VL + L++M EE+VS
Sbjct: 574 DPKNQGLFHRVLREEISLAKLVRMKPEELVS 604
>gi|255582730|ref|XP_002532142.1| transcription elongation factor s-II, putative [Ricinus communis]
gi|223528178|gb|EEF30241.1| transcription elongation factor s-II, putative [Ricinus communis]
Length = 1154
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%)
Query: 224 PIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMS 283
P VA T E+ ++ +G Y+ K RS+LFNL D NP+ R +V+ G + PE L M+
Sbjct: 391 PQTVASTIEAELYNLFGGVNKKYKEKGRSLLFNLKDRNNPELRARVMSGEIPPEKLCSMT 450
Query: 284 SEEMVS 289
+EE+ S
Sbjct: 451 AEELAS 456
>gi|195478903|ref|XP_002100690.1| GE17201 [Drosophila yakuba]
gi|194188214|gb|EDX01798.1| GE17201 [Drosophila yakuba]
Length = 162
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 78/172 (45%), Gaps = 19/172 (11%)
Query: 193 RERIREKLYKALSKVSGEVDEEVQDKLNGC-DPIRVAITAESLMFEKWGHSFGTYEVKYR 251
R + RE L AL +G++ E GC DP +A E ++ + Y+ + R
Sbjct: 6 RIKCREMLAAALQ--AGDLPE-------GCGDPEDMAAQLEEAIYVELKCCQVKYKNRIR 56
Query: 252 SILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYLPW 311
S L NL DP+NP R K LLG + E + +M+ EEM SD +++ Q+ ++ + +
Sbjct: 57 SRLANLRDPKNPGLREKFLLGLIGVEKMARMTPEEMASDDLKQMRQKFVQDSINKAQMAK 116
Query: 312 KGGYLGPIYHSTRYMCGRCGHKKTTN--HGNDQNSS-AKRIKCLNCYQYWES 360
G ++ C RC HK+ H D + + C C W++
Sbjct: 117 FQGTKTDLFK-----CDRC-HKRNCIQLHTRDGDEPMVTFVMCDECGNRWKN 162
>gi|393220677|gb|EJD06163.1| transcription elongation factor [Fomitiporia mediterranea MF3/22]
Length = 296
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 12/141 (8%)
Query: 225 IRVAITAESLMFEKWGHSFGT-YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMS 283
++ A ES + E + G Y+ K RS+ NL D NP R ++ G ++ +MS
Sbjct: 160 LKRATAIESTVLEDHNNDTGKEYKGKIRSLFLNLKDKNNPGLRANIVSGELEVAKFCRMS 219
Query: 284 SEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQN 343
S+EM S+ + ++ I++E G + + CG+C +K T + Q
Sbjct: 220 SQEMASEERKAADKAIQEENFYKSL-----GAEEQQAETDAFQCGKCKQRK-TRYRQAQT 273
Query: 344 SSAKR-----IKCLNCYQYWE 359
SA + C+NC W+
Sbjct: 274 RSADEPMTTFVTCVNCNHRWK 294
>gi|241063664|ref|XP_002408196.1| hypothetical protein IscW_ISCW000551 [Ixodes scapularis]
gi|215492398|gb|EEC02039.1| hypothetical protein IscW_ISCW000551 [Ixodes scapularis]
Length = 1507
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 55/98 (56%), Gaps = 3/98 (3%)
Query: 192 FRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVKYR 251
R +R+ L +LS + D+ L+G + R+A+ E +F+ + + Y+ KYR
Sbjct: 812 VRINVRKVLRDSLSNRCKDADD---ISLSGDEVKRMAVRIEEELFKYFKDTGTKYKSKYR 868
Query: 252 SILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
S++FN+ D N RK+L G + P+ L++M+ EE+ S
Sbjct: 869 SLVFNIKDTRNQGLFRKILKGKIAPDKLVRMTPEELAS 906
>gi|303321710|ref|XP_003070849.1| transcription elongation factor S-II family protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240110546|gb|EER28704.1| transcription elongation factor S-II family protein [Coccidioides
posadasii C735 delta SOWgp]
gi|320040335|gb|EFW22268.1| transcription elongation factor S-II [Coccidioides posadasii str.
Silveira]
gi|392862246|gb|EAS37125.2| transcription elongation factor S-II [Coccidioides immitis RS]
Length = 303
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 56/118 (47%), Gaps = 11/118 (9%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
Y K RS+ NL + NP R +VL + P+ ++M+ +E+ SD R +++I+KE
Sbjct: 190 YRTKIRSLYQNLRNKSNPALRVRVLSNEIAPDKFVRMTHDELKSDERREEDRKIEKENM- 248
Query: 306 DRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYW 358
D+ + K S CG+CG +K T + Q SA CL C + W
Sbjct: 249 DKAMVAKAER----SISKSLQCGKCGQRKVT-YTEAQTRSADEPMTLFCTCLACGKSW 301
>gi|356509950|ref|XP_003523705.1| PREDICTED: uncharacterized protein LOC100791982 [Glycine max]
Length = 1090
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Query: 205 SKVSGEVDEEVQDKLNGCD-----PIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMD 259
S+++ E E ++ GC P +A E+ +F+ +G Y+ K RS+LFNL D
Sbjct: 339 SQINIEQRSEPEESGGGCRVEVPLPKLLASRIEAELFKLFGGVNKKYKEKGRSLLFNLKD 398
Query: 260 PENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
NP+ R +V+ G + PE L M++EE+ S
Sbjct: 399 HNNPELRERVMFGKIPPEQLCSMTAEELAS 428
>gi|119195887|ref|XP_001248547.1| hypothetical protein CIMG_02318 [Coccidioides immitis RS]
Length = 324
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 56/118 (47%), Gaps = 11/118 (9%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
Y K RS+ NL + NP R +VL + P+ ++M+ +E+ SD R +++I+KE
Sbjct: 190 YRTKIRSLYQNLRNKSNPALRVRVLSNEIAPDKFVRMTHDELKSDERREEDRKIEKENM- 248
Query: 306 DRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYW 358
D+ + K S CG+CG +K T + Q SA CL C + W
Sbjct: 249 DKAMVAKAER----SISKSLQCGKCGQRKVT-YTEAQTRSADEPMTLFCTCLACGKSW 301
>gi|378733301|gb|EHY59760.1| transcription elongation factor S-II [Exophiala dermatitidis
NIH/UT8656]
Length = 306
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 58/127 (45%), Gaps = 11/127 (8%)
Query: 238 KWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQ 297
K S Y+ K RS+ NL + NP R+++L G V + M+ EEM S R
Sbjct: 184 KGSSSSPVYKDKIRSLYQNLKNKSNPGLRKRILSGEVTAVRFVSMTHEEMKSKQQREEEI 243
Query: 298 QIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCL 352
+I KE ++ + + + ST CG+C H+K ++ Q SA +CL
Sbjct: 244 KIAKENMNNAMVAQEEKSV-----STSLECGKC-HQKKVSYSQAQTRSADEPMTTFCECL 297
Query: 353 NCYQYWE 359
NC W+
Sbjct: 298 NCGNRWK 304
>gi|351705981|gb|EHB08900.1| Transcription elongation factor A protein 3 [Heterocephalus glaber]
Length = 543
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 5/91 (5%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
Y + RS + NL DP NP RR VL G + + KM++EEM SD R+L + +E
Sbjct: 316 YRNRVRSRISNLKDPRNPGLRRNVLNGAISAGLIAKMTAEEMASDELRKLRNAMTQEAIR 375
Query: 306 DRYLPWKGGYLGPIYHSTRYMCGRCGHKKTT 336
+ + GG + C +C K T
Sbjct: 376 EHQMAKTGGTTTDLLQ-----CSKCKKKNCT 401
>gi|327349505|gb|EGE78362.1| transcription elongation factor S-II [Ajellomyces dermatitidis ATCC
18188]
Length = 373
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 63/141 (44%), Gaps = 11/141 (7%)
Query: 219 LNGCDPIRV----AITAESLMFEKWG-HSFGTYEVKYRSILFNLMDPENPDFRRKVLLGH 273
LN +P R+ AI E + G + Y K RS+ NL + NP R +VL
Sbjct: 228 LNSTEPPRIVLQKAIEVELAAYTCLGPETKEQYRTKMRSLFQNLKNKSNPGLRVRVLSNE 287
Query: 274 VKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHK 333
V E ++M+ +E+ SD R ++I KE D+ + K ST CG+CG +
Sbjct: 288 VTAEKFVRMTHDELKSDAQREEERRIHKENM-DKAMVAKAER----SVSTSLQCGKCGQR 342
Query: 334 KTTNHGNDQNSSAKRIKCLNC 354
K T + Q SA L C
Sbjct: 343 KVT-YTEAQTRSADEPMTLFC 362
>gi|294880257|ref|XP_002768947.1| transcription elongation factor s-ii, putative [Perkinsus marinus
ATCC 50983]
gi|239871976|gb|EER01665.1| transcription elongation factor s-ii, putative [Perkinsus marinus
ATCC 50983]
Length = 621
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 227 VAITAESLMFEKWGHSFGT--YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSS 284
+A E +++K S + Y YR + FNL DP+N RR+VL G + P+ L+ S
Sbjct: 349 LASNIEGALYDKHERSIKSKAYRAAYRMVNFNLSDPQNASLRRRVLTGEMSPQHLVTASH 408
Query: 285 EEMVSDG--SRRLNQQIK 300
+E+ SD RRL QQ K
Sbjct: 409 DELGSDSLKKRRLRQQEK 426
>gi|344253671|gb|EGW09775.1| Transcription elongation factor A protein 1 [Cricetulus griseus]
Length = 278
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 11/119 (9%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
Y+ + RS + D +NP+ R+ VL G++ P+ +M++EEM SD + + + + KE
Sbjct: 164 YKNRVRSRISVPKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIR 223
Query: 306 DRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
+ + GG + + CG+C KK + Q SA + C C W+
Sbjct: 224 EHQMAKTGG-----TQTDLFTCGKC-KKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 276
>gi|28204843|gb|AAH44755.1| Dido1 protein [Mus musculus]
Length = 643
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 71/151 (47%), Gaps = 15/151 (9%)
Query: 143 SKKLVGSEFIVTEETNSLDNVDAEAIREEKPASAVVPQKLVSMIKC----NDYFRERIRE 198
SKKL GS +V V + + PA++ P +L + N R+ IR
Sbjct: 82 SKKLPGSAAVV--------GVTRKPMSANVPAASPAPGRLGPVSPAPSQPNSQIRQNIRR 133
Query: 199 KLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLM 258
L + L K + D+ + + N ++A+ E MF + + Y+ KYRSI+FNL
Sbjct: 134 SLKEILWKRVNDSDDLIMTE-NEVG--KIALHIEKEMFNLFQVTDNRYKSKYRSIMFNLK 190
Query: 259 DPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
DP+N +VL + L++M EE+VS
Sbjct: 191 DPKNQGLFHRVLREEISLAKLVRMKPEELVS 221
>gi|391863799|gb|EIT73098.1| putative transcription factor [Aspergillus oryzae 3.042]
Length = 903
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 53/81 (65%), Gaps = 6/81 (7%)
Query: 226 RVAITAESLMFEKW----GHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIK 281
++A++ E+ M+E + G + Y+ + R+ILFN+ +NP R ++L+G + P+ L K
Sbjct: 357 QLALSIENAMYENFCGGSGETTEQYKAQLRTILFNVK--KNPSLRDRLLVGSLLPDTLSK 414
Query: 282 MSSEEMVSDGSRRLNQQIKKE 302
MSS++M S+ ++ + +IK+E
Sbjct: 415 MSSQDMASEELQQKDAEIKRE 435
>gi|320588310|gb|EFX00779.1| transcription elongation factor s 2 [Grosmannia clavigera kw1407]
Length = 332
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 68/165 (41%), Gaps = 20/165 (12%)
Query: 200 LYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMD 259
LY L+ S E+ E V K AI E F + Y K RS+ NL +
Sbjct: 181 LYNGLAFRSTELPERVLAK---------AIEVEKAAFVVYKGETAEYRAKLRSLFQNLKN 231
Query: 260 PENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPI 319
NP R+V+ G + +A + MSS+E+ S ++L ++KE +P +
Sbjct: 232 RSNPALGRRVVAGEIAADAFVVMSSDELKSAHLKQLESDLQKENMKKAQVPMTEKSI--- 288
Query: 320 YHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
S CG+C +K + + Q SA +C C W+
Sbjct: 289 --SDALTCGKCKQRKVS-YTQAQTRSADEPMTTFCECTVCGHRWK 330
>gi|115444961|ref|NP_001046260.1| Os02g0208600 [Oryza sativa Japonica Group]
gi|113535791|dbj|BAF08174.1| Os02g0208600, partial [Oryza sativa Japonica Group]
Length = 913
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 212 DEEVQDK---LNGCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRK 268
DEE DK + D +A+ E +F+ +G Y+ K RS+LFNL D NP+ R +
Sbjct: 331 DEEAIDKDSIIQKAD--DLAVRVEEELFKLFGGVNKKYKEKGRSLLFNLKDKSNPELRER 388
Query: 269 VLLGHVKPEALIKMSSEEMVS 289
VL G + P+ L M++EE+ S
Sbjct: 389 VLSGDITPDRLCSMTAEELAS 409
>gi|79563173|ref|NP_180135.2| SPOC domain / Transcription elongation factor S-II protein
[Arabidopsis thaliana]
gi|330252635|gb|AEC07729.1| SPOC domain / Transcription elongation factor S-II protein
[Arabidopsis thaliana]
Length = 745
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 39/67 (58%)
Query: 223 DPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKM 282
DP +A E+ +F+ +G Y+ K RS+LFNL D NP R KV+ G + E L M
Sbjct: 315 DPQVLAFEIETELFKLFGGVNKKYKEKGRSLLFNLKDKSNPKLREKVMYGEIAAERLCSM 374
Query: 283 SSEEMVS 289
S+EE+ S
Sbjct: 375 SAEELAS 381
>gi|238501684|ref|XP_002382076.1| PHD finger domain protein, putative [Aspergillus flavus NRRL3357]
gi|220692313|gb|EED48660.1| PHD finger domain protein, putative [Aspergillus flavus NRRL3357]
Length = 924
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 53/81 (65%), Gaps = 6/81 (7%)
Query: 226 RVAITAESLMFEKW----GHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIK 281
++A++ E+ M+E + G + Y+ + R+ILFN+ +NP R ++L+G + P+ L K
Sbjct: 378 QLALSIENAMYENFCGGSGETTEQYKAQLRTILFNVK--KNPSLRDRLLVGSLLPDTLSK 435
Query: 282 MSSEEMVSDGSRRLNQQIKKE 302
MSS++M S+ ++ + +IK+E
Sbjct: 436 MSSQDMASEELQQKDAEIKRE 456
>gi|83766945|dbj|BAE57085.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 761
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 53/81 (65%), Gaps = 6/81 (7%)
Query: 226 RVAITAESLMFEKW----GHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIK 281
++A++ E+ M+E + G + Y+ + R+ILFN+ +NP R ++L+G + P+ L K
Sbjct: 291 QLALSIENAMYENFCGGSGETTEQYKAQLRTILFNVK--KNPSLRDRLLVGSLLPDTLSK 348
Query: 282 MSSEEMVSDGSRRLNQQIKKE 302
MSS++M S+ ++ + +IK+E
Sbjct: 349 MSSQDMASEELQQKDAEIKRE 369
>gi|317142778|ref|XP_001819087.2| PHD finger domain protein [Aspergillus oryzae RIB40]
Length = 896
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 53/81 (65%), Gaps = 6/81 (7%)
Query: 226 RVAITAESLMFEKW----GHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIK 281
++A++ E+ M+E + G + Y+ + R+ILFN+ +NP R ++L+G + P+ L K
Sbjct: 350 QLALSIENAMYENFCGGSGETTEQYKAQLRTILFNVK--KNPSLRDRLLVGSLLPDTLSK 407
Query: 282 MSSEEMVSDGSRRLNQQIKKE 302
MSS++M S+ ++ + +IK+E
Sbjct: 408 MSSQDMASEELQQKDAEIKRE 428
>gi|224143046|ref|XP_002324832.1| predicted protein [Populus trichocarpa]
gi|222866266|gb|EEF03397.1| predicted protein [Populus trichocarpa]
Length = 633
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 40/67 (59%)
Query: 223 DPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKM 282
DP +A E+ +F+ +G Y+ K RS+LFNL D NP+ R KV+ G + P L M
Sbjct: 280 DPRVLASEIEAELFKLFGGVNKKYKEKGRSLLFNLKDRNNPELREKVMSGEIPPGRLCSM 339
Query: 283 SSEEMVS 289
++EE+ S
Sbjct: 340 TAEELAS 346
>gi|114050769|ref|NP_001040406.1| transcription elongation factor S-II [Bombyx mori]
gi|95102774|gb|ABF51328.1| transcription elongation factor S-II [Bombyx mori]
Length = 288
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 61/133 (45%), Gaps = 9/133 (6%)
Query: 178 VPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGC-DPIRVAITAESLMF 236
+P D R + RE L +AL K +GE N C P +A E ++
Sbjct: 113 LPASFPPQSNTTDAVRLKCRELLTQAL-KAAGETS-------NACGSPEELAEELEECIY 164
Query: 237 EKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLN 296
++ ++ Y+ + RS + NL DP+NP R G + L KM+ EEM SD ++L
Sbjct: 165 AEFKNTDMRYKNRVRSRVANLKDPKNPTLRTNFFNGVISASRLAKMTPEEMASDEMKKLR 224
Query: 297 QQIKKERASDRYL 309
++ KE D L
Sbjct: 225 EKFIKEAIDDAQL 237
>gi|51968872|dbj|BAD43128.1| putative transcription elongation factor S-II [Arabidopsis
thaliana]
Length = 745
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 39/67 (58%)
Query: 223 DPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKM 282
DP +A E+ +F+ +G Y+ K RS+LFNL D NP R KV+ G + E L M
Sbjct: 315 DPQVLAFEIETELFKLFGGVNKKYKEKGRSLLFNLKDKSNPKLREKVMYGEIAAERLCSM 374
Query: 283 SSEEMVS 289
S+EE+ S
Sbjct: 375 SAEELAS 381
>gi|49387896|dbj|BAD24999.1| PHD finger protein-like [Oryza sativa Japonica Group]
gi|49387908|dbj|BAD25008.1| PHD finger protein-like [Oryza sativa Japonica Group]
Length = 1119
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 212 DEEVQDK---LNGCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRK 268
DEE DK + D +A+ E +F+ +G Y+ K RS+LFNL D NP+ R +
Sbjct: 331 DEEAIDKDSIIQKAD--DLAVRVEEELFKLFGGVNKKYKEKGRSLLFNLKDKSNPELRER 388
Query: 269 VLLGHVKPEALIKMSSEEMVS 289
VL G + P+ L M++EE+ S
Sbjct: 389 VLSGDITPDRLCSMTAEELAS 409
>gi|397629130|gb|EJK69212.1| hypothetical protein THAOC_09547 [Thalassiosira oceanica]
Length = 286
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 64/130 (49%), Gaps = 18/130 (13%)
Query: 245 TYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS-DGSRRLNQQIKKER 303
TY K RS++FNL +N R +V+LG + E L KM EE+ + + ++ N Q +K
Sbjct: 159 TYTEKVRSLVFNLK--KNGPLREQVILGQIVTEQLPKMPPEELATAEMNKERNAQAEKLM 216
Query: 304 ASDRYLPWKG----------GYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKRIK--- 350
AS R L W+ G G + ++ + CGRC KTT+ S+ + +
Sbjct: 217 AS-RQLDWEKKNEGKINEICGIKGDLLKASLFTCGRCKSTKTTSTQKQTRSADEPMTVFV 275
Query: 351 -CLNCYQYWE 359
CLNC W+
Sbjct: 276 LCLNCGNRWK 285
>gi|67522641|ref|XP_659381.1| hypothetical protein AN1777.2 [Aspergillus nidulans FGSC A4]
gi|40744797|gb|EAA63953.1| hypothetical protein AN1777.2 [Aspergillus nidulans FGSC A4]
gi|259487122|tpe|CBF85543.1| TPA: PHD finger domain protein, putative (AFU_orthologue;
AFUA_6G09000) [Aspergillus nidulans FGSC A4]
Length = 889
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 83/169 (49%), Gaps = 21/169 (12%)
Query: 140 APRSKKLVGSEFIVTEETNSLDNVDAEAIREEKPASAVVPQKLVSMIKCNDYFRERIREK 199
+P K+ VG + T +T + D E ++ + P + + F ++I
Sbjct: 249 SPEDKEPVGQD---TNQTPAADTTKTERLKTLE--DITNPARRNAASALTKVFVDQISSA 303
Query: 200 LYKALSKVS-GEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFG-----TYEVKYRSI 253
L K+S G+ EEV +L I+ E +++ G Y+++ R+I
Sbjct: 304 LAGGSFKMSEGKTGEEVGQQL--------GISVEEALYQNLMGGGGEATSEAYKIQLRAI 355
Query: 254 LFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKE 302
LFN+ +NP R ++L+G + P+AL +MSS+EM S+ ++ + +IK+E
Sbjct: 356 LFNVK--KNPSLRDRLLVGSLTPDALSRMSSQEMASEELQQKDAEIKRE 402
>gi|145349019|ref|XP_001418938.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579168|gb|ABO97231.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 528
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Query: 192 FRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVKYR 251
R +RE + KA+ + E D+ NG P VA ES +++K G + Y + R
Sbjct: 11 IRSTVREFILKAMEMAAEETKASGHDEANGT-PSEVAAAVESALYKKCGSADKEYRTRAR 69
Query: 252 SILFNLMDPENPDFRRKVLLGHVKPEALIKMS 283
S+ NL D NP R +VL +K L+ MS
Sbjct: 70 SLKSNLQDVRNPQLRARVLANDLKASQLVDMS 101
>gi|326673092|ref|XP_686400.5| PREDICTED: hypothetical protein LOC553518 [Danio rerio]
Length = 1738
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Query: 191 YFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVKY 250
+ R +R+ L + L K S E D K++ P VA E +F + Y+ KY
Sbjct: 801 HIRRSVRDSLEEILLKRSKESDL----KISSDRPAEVARRTEKELFALFQGVDSKYKNKY 856
Query: 251 RSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
RS+ FNL D +N ++VL G V P L++M++EE+ S
Sbjct: 857 RSLTFNLKDAKNNVLFKRVLKGEVSPADLVRMTAEELAS 895
>gi|222622404|gb|EEE56536.1| hypothetical protein OsJ_05842 [Oryza sativa Japonica Group]
Length = 614
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 39/63 (61%)
Query: 227 VAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEE 286
+A+ E +F+ +G Y+ K RS+LFNL D NP+ R +VL G + P+ L M++EE
Sbjct: 22 LAVRVEEELFKLFGGVNKKYKEKGRSLLFNLKDKSNPELRERVLSGDITPDRLCSMTAEE 81
Query: 287 MVS 289
+ S
Sbjct: 82 LAS 84
>gi|218190291|gb|EEC72718.1| hypothetical protein OsI_06323 [Oryza sativa Indica Group]
Length = 907
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 212 DEEVQDK---LNGCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRK 268
DEE DK + D + V I E +F+ +G Y+ K RS+LFNL D NP+ R +
Sbjct: 6 DEEAIDKDSIIQKADDLAVRIEEE--LFKLFGGVNKKYKEKGRSLLFNLKDKSNPELRER 63
Query: 269 VLLGHVKPEALIKMSSEEMVS 289
VL G + P+ L M++EE+ S
Sbjct: 64 VLSGDITPDRLCSMTAEELAS 84
>gi|237841743|ref|XP_002370169.1| transcription elongation factor TFIIS, putative [Toxoplasma gondii
ME49]
gi|95007190|emb|CAJ20411.1| transcription elongation factor s-II, putative [Toxoplasma gondii
RH]
gi|211967833|gb|EEB03029.1| transcription elongation factor TFIIS, putative [Toxoplasma gondii
ME49]
gi|221482635|gb|EEE20973.1| transcription elongation factor, putative [Toxoplasma gondii GT1]
gi|221503171|gb|EEE28877.1| transcription elongation factor, putative [Toxoplasma gondii VEG]
Length = 418
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 76/179 (42%), Gaps = 10/179 (5%)
Query: 189 NDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKW---GHSFGT 245
D R+R R L++AL V G + RVA E +++++ S
Sbjct: 241 GDAVRDRARGFLWRAL--VDGMQSRRDLGADRSGETARVAAEIEKALWQEYCVRRKSTKE 298
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
Y ++ +++ +N D +NPD KVL G PE L MSS ++ SD +R+ + KKE
Sbjct: 299 YNMQLKTLKWNFADQKNPDLNLKVLCGVYTPEQLAIMSSADLASDEKKRMRELQKKESME 358
Query: 306 DRYLPWK-GGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR----IKCLNCYQYWE 359
W+ + ++ C +C KT SS + + CL C W+
Sbjct: 359 ACQSDWEMKKLMEGASEGGQFPCFKCRTTKTVYFQMQTRSSDEPMTTFVTCLECGNRWK 417
>gi|348583099|ref|XP_003477312.1| PREDICTED: transcription elongation factor A protein 3-like [Cavia
porcellus]
Length = 347
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 76/169 (44%), Gaps = 14/169 (8%)
Query: 196 IREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILF 255
IR+K + LS V+ + +++ +D CD ++A E ++ + + Y + RS +
Sbjct: 186 IRDKCVEMLS-VALKAEDDYKDYGVNCD--KMASEIEDHIYRELKSTDMKYRNRVRSRIS 242
Query: 256 NLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGY 315
NL DP+NP RR VL G + + KM +EEM SD + L + +E + + G
Sbjct: 243 NLKDPKNPGLRRNVLSGAISTGLIAKMMAEEMASDELKELRNAMTQEAIREHQMAKTSG- 301
Query: 316 LGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
++ C +C KK + Q SA + C C W+
Sbjct: 302 ----TNTDLLQCSKC-KKKNCTYNQVQTLSADEPMTTFVLCNECGHRWK 345
>gi|4874303|gb|AAD31365.1| putative transcription elongation factor S-II [Arabidopsis
thaliana]
Length = 643
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 39/68 (57%)
Query: 222 CDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIK 281
DP +A E+ +F+ +G Y+ K RS+LFNL D NP R KV+ G + E L
Sbjct: 263 LDPQVLAFEIETELFKLFGGVNKKYKEKGRSLLFNLKDKSNPKLREKVMYGEIAAERLCS 322
Query: 282 MSSEEMVS 289
MS+EE+ S
Sbjct: 323 MSAEELAS 330
>gi|348529301|ref|XP_003452152.1| PREDICTED: hypothetical protein LOC100695418 [Oreochromis
niloticus]
Length = 620
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 78/182 (42%), Gaps = 18/182 (9%)
Query: 182 LVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGH 241
L + D R++ E L AL D + ++ C+ + I E ++++
Sbjct: 449 LSPHLTTGDSIRDKCIEMLAAAL-----RTDNDYKEFGANCESMGAEI--EDHIYQEIKA 501
Query: 242 SFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKK 301
+ Y+ + RS + NL DP+NP R+ VL G ++ + MS+EEM SD ++L + +
Sbjct: 502 TDMKYKNRVRSRISNLKDPKNPGLRKNVLAGSIELRRIATMSAEEMASDELKQLRNVLTQ 561
Query: 302 ERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQ 356
E + + GG + CG+C KK + Q SA + C C
Sbjct: 562 EAIREHQMAKTGGTTTDL-----LQCGKCK-KKNCTYNQVQTRSADEPMTTFVLCNECGN 615
Query: 357 YW 358
W
Sbjct: 616 RW 617
>gi|225430091|ref|XP_002281873.1| PREDICTED: uncharacterized protein LOC100267937 [Vitis vinifera]
Length = 1146
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 40/66 (60%)
Query: 224 PIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMS 283
P +A E+ +F+ +G Y+ K RS+LFNL D NP+ R +V+ G + PE L M+
Sbjct: 405 PQTLAFEIEAELFKLFGGVNKKYKEKGRSLLFNLKDRNNPELRERVVAGEISPERLCSMT 464
Query: 284 SEEMVS 289
+EE+ S
Sbjct: 465 AEELAS 470
>gi|425781061|gb|EKV19043.1| Transcription elongation factor S-II [Penicillium digitatum PHI26]
gi|425783194|gb|EKV21053.1| Transcription elongation factor S-II [Penicillium digitatum Pd1]
Length = 306
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 11/118 (9%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
Y K RS+ NL + NP R +V+ G + + ++MS +E+ S R + +I+KE
Sbjct: 193 YRTKIRSLFQNLKNKSNPKLRVRVVEGEITSDQFVRMSHDELRSVEQREADAKIQKENMD 252
Query: 306 DRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYW 358
+ + + S CG+CG +K T + Q +A CLNC + W
Sbjct: 253 KAMVAQQERSI-----SKSLQCGKCGQRKVT-YTEAQTRAADEPMTLFCTCLNCGKSW 304
>gi|390465645|ref|XP_003733445.1| PREDICTED: LOW QUALITY PROTEIN: SPOC domain-containing protein 1
[Callithrix jacchus]
Length = 1096
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 227 VAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEE 286
+A E+ +++ + G Y+ KYRS+LFNL DP N D KV+ G V P L++MSS +
Sbjct: 539 IAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVNPYDLVRMSSRQ 598
Query: 287 MV 288
+
Sbjct: 599 LA 600
>gi|147841857|emb|CAN64736.1| hypothetical protein VITISV_043189 [Vitis vinifera]
Length = 1059
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 40/66 (60%)
Query: 224 PIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMS 283
P +A E+ +F+ +G Y+ K RS+LFNL D NP+ R +V+ G + PE L M+
Sbjct: 405 PQTLAFEIEAELFKLFGGVNKKYKEKGRSLLFNLKDRNNPELRERVVAGEISPERLCSMT 464
Query: 284 SEEMVS 289
+EE+ S
Sbjct: 465 AEELAS 470
>gi|392559485|gb|EIW52669.1| transcription elongation factor [Trametes versicolor FP-101664 SS1]
Length = 306
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 70/175 (40%), Gaps = 20/175 (11%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVK 249
D R++ E +Y AL SG E+V + A E +F + Y+ K
Sbjct: 145 DKTRDKCAELIYDALVFDSGAPSEQVMTR---------AKDIEKTVFNDNSGANAAYKAK 195
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYL 309
RS+ NL D NP R V+ G + +MSS++M S+ + + +I +E L
Sbjct: 196 IRSLFVNLKDKNNPGLRESVVSGDLAIAKFCRMSSQDMASEERKAADAKIAQEN-----L 250
Query: 310 PWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
G + + CGRC +K + Q SA + C C W+
Sbjct: 251 FKTLGAEEVQAETDAFQCGRCKQRK-CRYRQAQTRSADEPMTTFVTCTVCNNRWK 304
>gi|224092388|ref|XP_002309587.1| predicted protein [Populus trichocarpa]
gi|222855563|gb|EEE93110.1| predicted protein [Populus trichocarpa]
Length = 743
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 40/67 (59%)
Query: 223 DPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKM 282
DP +A E+ +F+ +G Y+ K RS+LFNL D NP+ R KV+ G + P L M
Sbjct: 390 DPQFLASEIEAELFKLFGGVNKKYKEKGRSLLFNLKDRSNPELREKVMSGEITPGRLCSM 449
Query: 283 SSEEMVS 289
++EE+ S
Sbjct: 450 TAEELAS 456
>gi|395856832|ref|XP_003800822.1| PREDICTED: SPOC domain-containing protein 1 [Otolemur garnettii]
Length = 1272
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%)
Query: 227 VAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEE 286
VA + E+ +F+ + Y+ KYRS+LFNL DP N D KV+ G V P L++MSS +
Sbjct: 709 VAASIEAALFDLTQGTNCRYKTKYRSLLFNLRDPRNMDLFLKVVHGDVSPHDLVRMSSIQ 768
Query: 287 MVSDGSRRLNQQIKK 301
+ R Q +K
Sbjct: 769 LAPQELARWRDQEEK 783
>gi|168050394|ref|XP_001777644.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670987|gb|EDQ57546.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1465
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 213 EEVQDKLNGCDPIR-VAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLL 271
E+V+ L+ D R +A E+ +F+ +G S Y K RS+LFNL D NP+ R +V
Sbjct: 345 EDVKGGLHFMDQARKLATDIEAELFKLYG-SKKMYNQKARSLLFNLKDKSNPELRARVFS 403
Query: 272 GHVKPEALIKMSSEEMVS 289
G + PE L +MS E++ S
Sbjct: 404 GEIPPEDLCRMSGEQLAS 421
>gi|322786324|gb|EFZ12874.1| hypothetical protein SINV_06958 [Solenopsis invicta]
Length = 113
Score = 52.0 bits (123), Expect = 4e-04, Method: Composition-based stats.
Identities = 36/117 (30%), Positives = 55/117 (47%), Gaps = 11/117 (9%)
Query: 248 VKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDR 307
++ RS + NL D +NP+ R L+G + P L M++EEM SD ++L +Q KKE +D
Sbjct: 1 MQVRSRVANLRDAKNPNLRMNFLVGAITPARLAVMTAEEMASDEIKQLREQFKKEAINDA 60
Query: 308 YLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
L G + CG+C K+ + Q SA + C C W+
Sbjct: 61 QLATVQG-----TKTDLLKCGKC-KKRNCTYNQVQTRSADEPMTTFVLCNECGNRWK 111
>gi|297821975|ref|XP_002878870.1| hypothetical protein ARALYDRAFT_481416 [Arabidopsis lyrata subsp.
lyrata]
gi|297324709|gb|EFH55129.1| hypothetical protein ARALYDRAFT_481416 [Arabidopsis lyrata subsp.
lyrata]
Length = 692
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 38/67 (56%)
Query: 223 DPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKM 282
DP +A E+ +F+ +G Y+ K RS+LFN D NP R KV+ G + E L M
Sbjct: 296 DPQVLAFEIEAELFKLFGGVNKKYKEKGRSLLFNFKDKSNPKLREKVMYGEIAAERLCSM 355
Query: 283 SSEEMVS 289
S+EE+ S
Sbjct: 356 SAEELAS 362
>gi|30689925|ref|NP_197934.2| SPOC dand transcription elongation factor S-II domain protein
[Arabidopsis thaliana]
gi|26449758|dbj|BAC42002.1| putative PHD finger protein [Arabidopsis thaliana]
gi|332006074|gb|AED93457.1| SPOC dand transcription elongation factor S-II domain protein
[Arabidopsis thaliana]
Length = 735
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%)
Query: 223 DPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKM 282
DP +A E +F+ +G Y+ K RS+LFNL D NP+ R V+ G + PE L M
Sbjct: 359 DPELLASKIELELFKLFGGVNKKYKEKGRSLLFNLKDKNNPELRESVMSGKISPERLCNM 418
Query: 283 SSEEMVS 289
++EE+ S
Sbjct: 419 TAEELAS 425
>gi|427779725|gb|JAA55314.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 1186
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%)
Query: 219 LNGCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEA 278
L+G + R+A+ E +F+ + + Y+ KYRS++FN+ D N RK+L G + P+
Sbjct: 1041 LSGDEVRRMALRIEEELFKVFRDTGTRYKSKYRSLVFNIKDSRNQGLFRKILRGKIAPDR 1100
Query: 279 LIKMSSEEMVSDGSRRLNQQIKK 301
L++M+ EE+ S R +Q K
Sbjct: 1101 LVRMTPEELASKELARWREQENK 1123
>gi|296081928|emb|CBI20933.3| unnamed protein product [Vitis vinifera]
Length = 1097
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 40/66 (60%)
Query: 224 PIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMS 283
P +A E+ +F+ +G Y+ K RS+LFNL D NP+ R +V+ G + PE L M+
Sbjct: 387 PQTLAFEIEAELFKLFGGVNKKYKEKGRSLLFNLKDRNNPELRERVVAGEISPERLCSMT 446
Query: 284 SEEMVS 289
+EE+ S
Sbjct: 447 AEELAS 452
>gi|42573473|ref|NP_974833.1| SPOC dand transcription elongation factor S-II domain protein
[Arabidopsis thaliana]
gi|332006075|gb|AED93458.1| SPOC dand transcription elongation factor S-II domain protein
[Arabidopsis thaliana]
Length = 997
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%)
Query: 223 DPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKM 282
DP +A E +F+ +G Y+ K RS+LFNL D NP+ R V+ G + PE L M
Sbjct: 359 DPELLASKIELELFKLFGGVNKKYKEKGRSLLFNLKDKNNPELRESVMSGKISPERLCNM 418
Query: 283 SSEEMVS 289
++EE+ S
Sbjct: 419 TAEELAS 425
>gi|444707355|gb|ELW48637.1| SPOC domain-containing protein 1 [Tupaia chinensis]
Length = 694
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 32/53 (60%)
Query: 227 VAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEAL 279
+A E+ +F+ + G Y+ KYRS+LFNL DP NPD KVL G V P L
Sbjct: 133 IAAGVEAALFDLTQGTQGRYKAKYRSLLFNLRDPRNPDLFLKVLHGDVTPHDL 185
>gi|33988379|gb|AAH07910.2| SPOCD1 protein, partial [Homo sapiens]
Length = 342
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%)
Query: 227 VAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEE 286
+A E+ +++ + G Y+ KYRS+LFNL DP N D KV+ G V P L++MSS +
Sbjct: 38 IAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQ 97
Query: 287 MVSDGSRRLNQQIKK 301
+ R Q +K
Sbjct: 98 LAPQELARWRDQEEK 112
>gi|281352337|gb|EFB27921.1| hypothetical protein PANDA_015330 [Ailuropoda melanoleuca]
Length = 2163
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 69/133 (51%), Gaps = 15/133 (11%)
Query: 167 AIREEKPASAVVP------QKLVS----MIKCNDYFRERIREKLYKALSKVSGEVDEEVQ 216
A+R KPA+A VP +LV+ + + N R+ IR L + L K + D+ +
Sbjct: 635 AVR--KPAAASVPLTSPAPGRLVTSNPALSQPNSQIRQNIRRSLKEILWKRVNDSDDLI- 691
Query: 217 DKLNGCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKP 276
+ + ++A+ E MF+ + + Y+ KYRSI+FNL DP+N +VL +
Sbjct: 692 --MTESEVGKIALHIEKEMFQLFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISL 749
Query: 277 EALIKMSSEEMVS 289
L++M EE+VS
Sbjct: 750 AKLVRMKPEELVS 762
>gi|301780734|ref|XP_002925785.1| PREDICTED: death-inducer obliterator 1-like [Ailuropoda
melanoleuca]
Length = 2165
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 69/133 (51%), Gaps = 15/133 (11%)
Query: 167 AIREEKPASAVVP------QKLVS----MIKCNDYFRERIREKLYKALSKVSGEVDEEVQ 216
A+R KPA+A VP +LV+ + + N R+ IR L + L K + D+ +
Sbjct: 635 AVR--KPAAASVPLTSPAPGRLVTSNPALSQPNSQIRQNIRRSLKEILWKRVNDSDDLI- 691
Query: 217 DKLNGCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKP 276
+ + ++A+ E MF+ + + Y+ KYRSI+FNL DP+N +VL +
Sbjct: 692 --MTESEVGKIALHIEKEMFQLFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISL 749
Query: 277 EALIKMSSEEMVS 289
L++M EE+VS
Sbjct: 750 AKLVRMKPEELVS 762
>gi|426328836|ref|XP_004025454.1| PREDICTED: SPOC domain-containing protein 1 [Gorilla gorilla
gorilla]
Length = 1173
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 227 VAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEE 286
+A E+ +++ + G Y+ KYRS+LFNL DP N D KV+ G V P L++MSS +
Sbjct: 640 IAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVNPYDLVRMSSMQ 699
Query: 287 MV 288
+
Sbjct: 700 LA 701
>gi|348510333|ref|XP_003442700.1| PREDICTED: LOW QUALITY PROTEIN: death-inducer obliterator 1-like
[Oreochromis niloticus]
Length = 2408
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
Query: 189 NDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEV 248
N+ R+ IR L L K + D+ K+ + R+A E MF + Y+
Sbjct: 734 NNQMRQNIRRSLTDILYKRVCDSDDL---KMTESEVGRLAFAIEKEMFNLCLSTDSKYKN 790
Query: 249 KYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
KYRS++FNL DP+N +V+ G V P L+++S+EE++S
Sbjct: 791 KYRSLMFNLKDPKNKGLFYRVVGGEVSPFRLVRLSAEELLS 831
>gi|242060932|ref|XP_002451755.1| hypothetical protein SORBIDRAFT_04g007300 [Sorghum bicolor]
gi|241931586|gb|EES04731.1| hypothetical protein SORBIDRAFT_04g007300 [Sorghum bicolor]
Length = 1087
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 38/63 (60%)
Query: 227 VAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEE 286
+A E +F+ +G Y+ K RS+LFNL D NP+ R +VL G + PE L M++EE
Sbjct: 341 LAFRIEEELFKLFGGVNKKYKEKGRSLLFNLKDKSNPELRERVLSGDIAPERLCSMTAEE 400
Query: 287 MVS 289
+ S
Sbjct: 401 LAS 403
>gi|221061105|ref|XP_002262122.1| transcription factor [Plasmodium knowlesi strain H]
gi|193811272|emb|CAQ42000.1| transcription factor, putative [Plasmodium knowlesi strain H]
Length = 407
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 76/179 (42%), Gaps = 13/179 (7%)
Query: 189 NDYFRERIREKLYKALSKVSGEVDEEV----QDKLNGCDPIRVAITAESLMFEKWGHSFG 244
ND R++ ++ L+KA ++G D + + KLN D I +F + S
Sbjct: 231 NDVLRDKAKQFLFKAF--ITGSDDNLLYLIDRKKLN--DIIYNIENELHKIFIEKKQSQK 286
Query: 245 TYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERA 304
Y ++ +SI FNL D +NP F K+ ++ P+ + M+S+EM SD ++ + +E
Sbjct: 287 EYNMQLKSIKFNLCDKKNPSFNEKIYAEYISPKIIATMNSQEMASDEKKKERNKCLQESL 346
Query: 305 SDRYLPWK-GGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSS----AKRIKCLNCYQYW 358
W L + C +C +T H SS + CL C W
Sbjct: 347 QACQSDWDVKNILLKKNRKGEFQCFKCKGYETVYHQLQTRSSDEPMTTFVTCLKCNNRW 405
>gi|357466369|ref|XP_003603469.1| Transcription elongation factor A protein [Medicago truncatula]
gi|355492517|gb|AES73720.1| Transcription elongation factor A protein [Medicago truncatula]
Length = 1132
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 40/66 (60%)
Query: 224 PIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMS 283
P +A E+ +F+ +G Y+ K RS+LFNL D NP+ R +V+ G + PE L M+
Sbjct: 393 PELLASRIEAELFKLFGGVNKKYKEKGRSLLFNLKDRNNPELRERVMFGKILPEQLCSMT 452
Query: 284 SEEMVS 289
+EE+ S
Sbjct: 453 AEELAS 458
>gi|40287878|gb|AAR84049.1| death inducer-obliterator-2 [Mus musculus]
Length = 1183
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 72/155 (46%), Gaps = 23/155 (14%)
Query: 143 SKKLVGSEFIVTEETNSLDNVDAEAIREEKPASAVVPQKLVSMIKCNDYFRERIREKLYK 202
SKKL GS +V V + + PA++ P +L + +IR+ + +
Sbjct: 622 SKKLPGSAAVV--------GVTRKPMSANVPAASPAPGRLGPVSPAPSQPNSQIRQNIRR 673
Query: 203 ALSKVSGEVDEEVQDKLNGCDPI--------RVAITAESLMFEKWGHSFGTYEVKYRSIL 254
+L ++ + ++N D + ++A+ E MF + + ++ KYRSI+
Sbjct: 674 SLKEI-------LWKRVNDSDYLIMTENEVGKIALHIEKEMFNLFQVTDNRFKSKYRSIM 726
Query: 255 FNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
FNL DP+N +VL + L++M EE+VS
Sbjct: 727 FNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVS 761
>gi|159124350|gb|EDP49468.1| PHD finger domain protein, putative [Aspergillus fumigatus A1163]
Length = 885
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 85/168 (50%), Gaps = 28/168 (16%)
Query: 140 APRSKKLVGSEFIVTEETNSLDNVDAEAIREEKPASAVVPQKLVSMIKCNDYFRERIREK 199
AP S++ SE T+E+ +LD + A R ASA+V KL F ++I +
Sbjct: 259 APPSRQSSVSEKTTTQESGTLDEISNPARRSA--ASALV--KL---------FVDQISDA 305
Query: 200 LYKALSKVS-GEVDEEVQDKLNGCDPIRVAITAESLMFEKW----GHSFGTYEVKYRSIL 254
+ K+ G +E+ +L + E M++ G Y+++ R+IL
Sbjct: 306 QKQGSFKLPEGRSAKEIAQQL--------GFSIEKAMYQNICGGSGEPTEPYKLQLRTIL 357
Query: 255 FNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKE 302
FN+ +NP R ++L+G + P+AL KMSS++M S+ + + +I++E
Sbjct: 358 FNVK--KNPSLRDRLLVGSLLPDALSKMSSQDMASEELLQKDAEIRRE 403
>gi|354543920|emb|CCE40642.1| hypothetical protein CPAR2_106770 [Candida parapsilosis]
Length = 300
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 64/140 (45%), Gaps = 10/140 (7%)
Query: 225 IRVAITAESLMFE-KWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMS 283
I +A ES +F+ ++ +Y K RS NL + +NP+ R +VL + IKM+
Sbjct: 164 ITIASEIESEVFKSEYSKVNDSYRNKLRSFTMNLRNKKNPELRERVLSKQITASQFIKMT 223
Query: 284 SEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQN 343
EM + ++ +++ K+ D G + R+ CG+C HKK + +
Sbjct: 224 PNEMAPEALKKEIEKLHKQNLFDAQ-----GATEKRAVTDRFTCGKCKHKKVSYYQMQTR 278
Query: 344 SSAKRI----KCLNCYQYWE 359
S+ + + C NC W+
Sbjct: 279 SADEPLTTFCTCENCGNRWK 298
>gi|427780239|gb|JAA55571.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 2067
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%)
Query: 219 LNGCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEA 278
L+G + R+A+ E +F+ + + Y+ KYRS++FN+ D N RK+L G + P+
Sbjct: 1009 LSGDEVRRMALRIEEELFKVFRDTGTRYKSKYRSLVFNIKDSRNQGLFRKILRGKIAPDR 1068
Query: 279 LIKMSSEEMVSDGSRRLNQQIKK 301
L++M+ EE+ S R +Q K
Sbjct: 1069 LVRMTPEELASKELARWREQENK 1091
>gi|225710958|gb|ACO11325.1| Transcription elongation factor S-II [Caligus rogercresseyi]
Length = 299
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 71/180 (39%), Gaps = 17/180 (9%)
Query: 186 IKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGT 245
I D R R RE + AL G D + D P E +F + +
Sbjct: 129 IGTTDDVRLRCREMISNALK---GTTDAGLPDGTVK-PPEEFGDLIEEAIFSNFKSTSAK 184
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
Y+ + RS +FNL D +NP R VL G + P M+++EM SD +IK +RA+
Sbjct: 185 YKNQIRSRVFNLRDKKNPALRENVLTGIIDPPKFAVMTADEMASD-------EIKNQRAA 237
Query: 306 DRYLPWKGGYLGPIYHSTRYM--CGRCGHKKTTNHGNDQNSS----AKRIKCLNCYQYWE 359
L I + + CG+C T + S+ A + C C W+
Sbjct: 238 FVKQGIDASQLAHIQGTKTDLLKCGKCKQSNCTYNQIQTRSADEPMATFVLCNECGNRWK 297
>gi|427788339|gb|JAA59621.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 2019
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%)
Query: 219 LNGCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEA 278
L+G + R+A+ E +F+ + + Y+ KYRS++FN+ D N RK+L G + P+
Sbjct: 997 LSGDEVRRMALRIEEELFKVFRDTGTRYKSKYRSLVFNIKDSRNQGLFRKILRGKIAPDR 1056
Query: 279 LIKMSSEEMVSDGSRRLNQQIKK 301
L++M+ EE+ S R +Q K
Sbjct: 1057 LVRMTPEELASKELARWREQENK 1079
>gi|89365915|gb|AAI14431.1| SPOCD1 protein [Homo sapiens]
Length = 1203
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 227 VAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEE 286
+A E+ +++ + G Y+ KYRS+LFNL DP N D KV+ G V P L++MSS +
Sbjct: 640 IAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQ 699
Query: 287 MV 288
+
Sbjct: 700 LA 701
>gi|427788337|gb|JAA59620.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 2031
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%)
Query: 219 LNGCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEA 278
L+G + R+A+ E +F+ + + Y+ KYRS++FN+ D N RK+L G + P+
Sbjct: 1009 LSGDEVRRMALRIEEELFKVFRDTGTRYKSKYRSLVFNIKDSRNQGLFRKILRGKIAPDR 1068
Query: 279 LIKMSSEEMVSDGSRRLNQQIKK 301
L++M+ EE+ S R +Q K
Sbjct: 1069 LVRMTPEELASKELARWREQENK 1091
>gi|332808286|ref|XP_003307989.1| PREDICTED: LOW QUALITY PROTEIN: SPOC domain-containing protein 1
[Pan troglodytes]
Length = 1204
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 227 VAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEE 286
+A E+ +++ + G Y+ KYRS+LFNL DP N D KV+ G V P L++MSS +
Sbjct: 641 IAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQ 700
Query: 287 MV 288
+
Sbjct: 701 LA 702
>gi|40287880|gb|AAR84050.1| death inducer-obliterator-3 [Mus musculus]
Length = 2256
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 72/155 (46%), Gaps = 23/155 (14%)
Query: 143 SKKLVGSEFIVTEETNSLDNVDAEAIREEKPASAVVPQKLVSMIKCNDYFRERIREKLYK 202
SKKL GS +V V + + PA++ P +L + +IR+ + +
Sbjct: 622 SKKLPGSAAVV--------GVTRKPMSANVPAASPAPGRLGPVSPAPSQPNSQIRQNIRR 673
Query: 203 ALSKVSGEVDEEVQDKLNGCDPI--------RVAITAESLMFEKWGHSFGTYEVKYRSIL 254
+L ++ + ++N D + ++A+ E MF + + ++ KYRSI+
Sbjct: 674 SLKEI-------LWKRVNDSDYLIMTENEVGKIALHIEKEMFNLFQVTDNRFKSKYRSIM 726
Query: 255 FNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
FNL DP+N +VL + L++M EE+VS
Sbjct: 727 FNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVS 761
>gi|47271475|ref|NP_653170.3| SPOC domain-containing protein 1 [Homo sapiens]
gi|74749560|sp|Q6ZMY3.1|SPOC1_HUMAN RecName: Full=SPOC domain-containing protein 1
gi|47077409|dbj|BAD18592.1| unnamed protein product [Homo sapiens]
Length = 1216
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 227 VAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEE 286
+A E+ +++ + G Y+ KYRS+LFNL DP N D KV+ G V P L++MSS +
Sbjct: 640 IAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQ 699
Query: 287 MV 288
+
Sbjct: 700 LA 701
>gi|397515904|ref|XP_003828181.1| PREDICTED: SPOC domain-containing protein 1 isoform 1 [Pan
paniscus]
Length = 1203
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 227 VAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEE 286
+A E+ +++ + G Y+ KYRS+LFNL DP N D KV+ G V P L++MSS +
Sbjct: 640 IAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQ 699
Query: 287 MV 288
+
Sbjct: 700 LA 701
>gi|448518329|ref|XP_003867941.1| Dst1 protein [Candida orthopsilosis Co 90-125]
gi|380352280|emb|CCG22505.1| Dst1 protein [Candida orthopsilosis]
Length = 300
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 63/140 (45%), Gaps = 10/140 (7%)
Query: 225 IRVAITAESLMFE-KWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMS 283
I +A ES +F+ ++ Y K RS NL + +NP+ R +VL + IKM+
Sbjct: 164 ITIASEIESEVFKSEYSKVNDAYRNKLRSFTMNLRNKKNPELRERVLSKQITASQFIKMT 223
Query: 284 SEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQN 343
EM + ++ +++ K+ D G + R+ CG+C HKK + +
Sbjct: 224 PNEMAPEALKKEIEKLHKQNLFDAQ-----GATEKRAVTDRFTCGKCKHKKVSYYQMQTR 278
Query: 344 SSAKRI----KCLNCYQYWE 359
S+ + + C NC W+
Sbjct: 279 SADEPLTTFCTCENCGNRWK 298
>gi|397515906|ref|XP_003828182.1| PREDICTED: SPOC domain-containing protein 1 isoform 2 [Pan
paniscus]
Length = 1216
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 227 VAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEE 286
+A E+ +++ + G Y+ KYRS+LFNL DP N D KV+ G V P L++MSS +
Sbjct: 640 IAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQ 699
Query: 287 MV 288
+
Sbjct: 700 LA 701
>gi|396472195|ref|XP_003839048.1| similar to transcription elongation factor s-ii [Leptosphaeria
maculans JN3]
gi|312215617|emb|CBX95569.1| similar to transcription elongation factor s-ii [Leptosphaeria
maculans JN3]
Length = 304
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 73/165 (44%), Gaps = 20/165 (12%)
Query: 200 LYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMD 259
+Y L+ +S + +E+ + +A E+ + G Y+ K RS+ NL +
Sbjct: 153 MYDGLAFMSEAMPDEI---------LVIAKQVEAAAYTNAGSINDAYKAKMRSLFQNLKN 203
Query: 260 PENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPI 319
NP R++V G + + + M+ +EM SD R ++ +++E + + +
Sbjct: 204 KTNPQLRKRVFSGDISAKRFVVMTHDEMKSDERRAEDKILEQENINQAMVAQVEKAI--- 260
Query: 320 YHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
S + CG+C +K ++ Q SA +C+NC W+
Sbjct: 261 --SKEFQCGKC-KQKMVSYSQAQTRSADEPMTTFCECMNCGNRWK 302
>gi|156102921|ref|XP_001617153.1| transcription elongation factor [Plasmodium vivax Sal-1]
gi|148806027|gb|EDL47426.1| transcription elongation factor, putative [Plasmodium vivax]
Length = 435
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 78/182 (42%), Gaps = 17/182 (9%)
Query: 189 NDYFRERIREKLYKALSKVSGEVDEEV----QDKLNGCDPIRVAITAESLMFEKWGHSFG 244
ND R++ ++ L+KA ++G D + + KLN D I F + S
Sbjct: 259 NDVLRDKAKQFLFKAF--ITGSDDNLLYLIDRKKLN--DIIYNIENELHKFFIEKKQSQK 314
Query: 245 TYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERA 304
Y ++ +SI FNL D +NP F K+ ++ P + M+S+EM SD ++ + +E
Sbjct: 315 EYNMQLKSIKFNLCDKKNPSFNEKIYAEYIPPRTIATMNSQEMASDEKKKERNKCLQESL 374
Query: 305 SDRYLPWKGGYLGPIYHSTR---YMCGRCGHKKTTNHGNDQNSS----AKRIKCLNCYQY 357
W + + TR + C +C +T H SS + CL C
Sbjct: 375 QACQSDWDVKNI--LLKKTRKGEFQCFKCKGYETVYHQLQTRSSDEPMTTFVTCLKCNNR 432
Query: 358 WE 359
W+
Sbjct: 433 WK 434
>gi|119627993|gb|EAX07588.1| SPOC domain containing 1, isoform CRA_c [Homo sapiens]
Length = 626
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%)
Query: 227 VAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEE 286
+A E+ +++ + G Y+ KYRS+LFNL DP N D KV+ G V P L++MSS +
Sbjct: 63 IAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQ 122
Query: 287 MVSDGSRRLNQQIKK 301
+ R Q +K
Sbjct: 123 LAPQELARWRDQEEK 137
>gi|413936812|gb|AFW71363.1| putative SPOC domain / Transcription elongation factor S-II protein
[Zea mays]
Length = 1082
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 38/63 (60%)
Query: 227 VAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEE 286
+A E +F+ +G Y+ K RS+LFNL D NP+ R +VL G + PE L M++EE
Sbjct: 344 LAFRIEEELFKLFGGVNKKYKEKGRSLLFNLKDKSNPELRERVLSGDIVPERLCSMTAEE 403
Query: 287 MVS 289
+ S
Sbjct: 404 LAS 406
>gi|134079343|emb|CAK96972.1| unnamed protein product [Aspergillus niger]
Length = 955
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 51/81 (62%), Gaps = 6/81 (7%)
Query: 226 RVAITAESLMFEK----WGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIK 281
+++++ ES M+E G Y + R+I+FN+ +NP R ++L+G + P+AL K
Sbjct: 396 QLSLSLESAMYENICGGTGEPTEPYRSQLRTIMFNVK--KNPSLRDRLLVGSLSPDALSK 453
Query: 282 MSSEEMVSDGSRRLNQQIKKE 302
MS+++M S+ ++ + +IK+E
Sbjct: 454 MSTQDMASEELQQKDAEIKRE 474
>gi|116283511|gb|AAH29069.1| SPOCD1 protein [Homo sapiens]
Length = 266
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%)
Query: 227 VAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEE 286
+A E+ +++ + G Y+ KYRS+LFNL DP N D KV+ G V P L++MSS +
Sbjct: 22 IAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQ 81
Query: 287 MVSDGSRRLNQQIKK 301
+ R Q +K
Sbjct: 82 LAPQELARWRDQEEK 96
>gi|21749290|dbj|BAC03567.1| unnamed protein product [Homo sapiens]
Length = 696
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%)
Query: 227 VAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEE 286
+A E+ +++ + G Y+ KYRS+LFNL DP N D KV+ G V P L++MSS +
Sbjct: 133 IAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQ 192
Query: 287 MVSDGSRRLNQQIKK 301
+ R Q +K
Sbjct: 193 LAPQELARWRDQEEK 207
>gi|119627992|gb|EAX07587.1| SPOC domain containing 1, isoform CRA_b [Homo sapiens]
Length = 644
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%)
Query: 227 VAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEE 286
+A E+ +++ + G Y+ KYRS+LFNL DP N D KV+ G V P L++MSS +
Sbjct: 68 IAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQ 127
Query: 287 MVSDGSRRLNQQIKK 301
+ R Q +K
Sbjct: 128 LAPQELARWRDQEEK 142
>gi|348554091|ref|XP_003462859.1| PREDICTED: death-inducer obliterator 1 [Cavia porcellus]
Length = 2259
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 69/147 (46%), Gaps = 7/147 (4%)
Query: 143 SKKLVGSEFIVTEETNSLDNVDAEAIREEKPASAVVPQKLVSMIKCNDYFRERIREKLYK 202
SKK +GS +V + A+ PA+ + + + N R+ IR L +
Sbjct: 622 SKKALGSAALVGSMRKPVTTSTPTAV----PATGRLGATGAAQSQPNSQIRQNIRRSLKE 677
Query: 203 ALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPEN 262
L K + D+ + + + ++A+ E MF + + Y+ KYRSI+FNL DP+N
Sbjct: 678 ILWKRVNDSDDLI---MTENEVGKIALHIEKEMFNLFQVTDNRYKSKYRSIMFNLKDPKN 734
Query: 263 PDFRRKVLLGHVKPEALIKMSSEEMVS 289
+VL + L++M EE+VS
Sbjct: 735 QGLFHRVLREEISLAKLVRMKPEELVS 761
>gi|350631410|gb|EHA19781.1| hypothetical protein ASPNIDRAFT_119842 [Aspergillus niger ATCC
1015]
Length = 891
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 51/81 (62%), Gaps = 6/81 (7%)
Query: 226 RVAITAESLMFEK----WGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIK 281
+++++ ES M+E G Y + R+I+FN+ +NP R ++L+G + P+AL K
Sbjct: 332 QLSLSLESAMYENICGGTGEPTEPYRSQLRTIMFNVK--KNPSLRDRLLVGSLSPDALSK 389
Query: 282 MSSEEMVSDGSRRLNQQIKKE 302
MS+++M S+ ++ + +IK+E
Sbjct: 390 MSTQDMASEELQQKDAEIKRE 410
>gi|154320754|ref|XP_001559693.1| transcription elongation factor S-II [Botryotinia fuckeliana
B05.10]
gi|347838992|emb|CCD53564.1| similar to transcription elongation factor s-ii [Botryotinia
fuckeliana]
Length = 301
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 59/137 (43%), Gaps = 11/137 (8%)
Query: 228 AITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEM 287
A+ E F+ +G Y+ K RS+ NL N R++V+ G + P + M+ EE+
Sbjct: 169 AMAVEQAAFDHFGGETKEYKEKLRSLFQNLKQVSNTQLRKRVMSGDIDPARFVVMTHEEL 228
Query: 288 VSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAK 347
S+ ++ + ++ E +P + S CG+CG KK + + Q SA
Sbjct: 229 KSEEMKKKDDALELENMKKAQVP-----MAEKSISDALTCGKCGQKKVS-YSQAQTRSAD 282
Query: 348 R-----IKCLNCYQYWE 359
+C C W+
Sbjct: 283 EPMTTFCECQVCGHRWK 299
>gi|441636142|ref|XP_003276474.2| PREDICTED: SPOC domain-containing protein 1 [Nomascus leucogenys]
Length = 1522
Score = 50.8 bits (120), Expect = 0.001, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 42/75 (56%)
Query: 227 VAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEE 286
+A E+ +++ + G Y+ KYRS+LFNL DP N D KV+ G V P L++MSS +
Sbjct: 945 IAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQ 1004
Query: 287 MVSDGSRRLNQQIKK 301
+ R Q +K
Sbjct: 1005 LAPQELARWRDQEEK 1019
>gi|325183258|emb|CCA17716.1| transcription elongation factor putative [Albugo laibachii Nc14]
gi|325183904|emb|CCA18362.1| transcription elongation factor putative [Albugo laibachii Nc14]
Length = 309
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 55/133 (41%), Gaps = 16/133 (12%)
Query: 240 GHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQI 299
G + Y K+R + FNL +N R +LL V E LI MS EE+ +D R +++
Sbjct: 179 GENKKDYTAKFRQLSFNL--KKNARLREDLLLDVVSAEQLINMSPEELATDEKRHEIEKL 236
Query: 300 KKERASDRYLPWKGGYLGPIYHST--------RYMCGRCGHKKTTNHGNDQNSSAKR--- 348
+ + L W I + CGRC KT+N Q SA
Sbjct: 237 RDDAFQRARLDWADANEDKINKQCGIEKNSKGLFTCGRCKSSKTSN-TQKQTRSADEPMT 295
Query: 349 --IKCLNCYQYWE 359
++C NC W+
Sbjct: 296 VFVQCHNCGNRWK 308
>gi|317032975|ref|XP_001394653.2| PHD finger domain protein [Aspergillus niger CBS 513.88]
Length = 903
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 51/81 (62%), Gaps = 6/81 (7%)
Query: 226 RVAITAESLMFEK----WGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIK 281
+++++ ES M+E G Y + R+I+FN+ +NP R ++L+G + P+AL K
Sbjct: 344 QLSLSLESAMYENICGGTGEPTEPYRSQLRTIMFNVK--KNPSLRDRLLVGSLSPDALSK 401
Query: 282 MSSEEMVSDGSRRLNQQIKKE 302
MS+++M S+ ++ + +IK+E
Sbjct: 402 MSTQDMASEELQQKDAEIKRE 422
>gi|91084035|ref|XP_966732.1| PREDICTED: similar to transcription elongation factor S-II
[Tribolium castaneum]
gi|270008004|gb|EFA04452.1| hypothetical protein TcasGA2_TC014756 [Tribolium castaneum]
Length = 294
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 77/176 (43%), Gaps = 20/176 (11%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGC-DPIRVAITAESLMFEKWGHSFGTYEV 248
D R + RE L A+ D E + GC P +A E +F+++ ++ Y+
Sbjct: 131 DAVRLKCREMLAAAI-----RCDTE---EFEGCASPEDLAEELEEAIFQEFKNTDMRYKN 182
Query: 249 KYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRY 308
+ RS + NL D +NP+ R +G + L M++EEM +D ++L ++ KE +D
Sbjct: 183 RVRSRIANLKDVKNPNLRTNFRIGAIPASRLAVMTAEEMANDEIKQLRERFTKEAINDAQ 242
Query: 309 LPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
L G + CG+C K+ + Q SA + C C W+
Sbjct: 243 LATVQGTKTDLLK-----CGKC-KKRNCTYNQVQTRSADEPMTTFVLCNECGNRWK 292
>gi|116180542|ref|XP_001220120.1| hypothetical protein CHGG_00899 [Chaetomium globosum CBS 148.51]
gi|88185196|gb|EAQ92664.1| hypothetical protein CHGG_00899 [Chaetomium globosum CBS 148.51]
Length = 307
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 52/119 (43%), Gaps = 11/119 (9%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
Y K R ++ +L +NP+ R+VL G + PE M+ EE+ SD R + +++E
Sbjct: 193 YRAKIRGLMTSLKRKDNPELGRRVLRGDIAPEKFAVMTDEELASDAQRERDAALERENML 252
Query: 306 DRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
+P + S CG+C KK + + Q SA +C C W+
Sbjct: 253 KAQVPMAQRSI-----SDSLQCGKCKQKKVS-YSQAQTRSADEPMTTFCECTVCGHRWK 305
>gi|357139063|ref|XP_003571105.1| PREDICTED: uncharacterized protein LOC100836963 [Brachypodium
distachyon]
Length = 1244
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 39/63 (61%)
Query: 227 VAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEE 286
+A+ E +F+ +G Y+ + RS+LFNL D NP+ R +VL G + PE L M++EE
Sbjct: 350 LALRIEEELFKLFGGVNKKYKERGRSLLFNLKDKSNPELRVRVLSGDIAPERLCSMTAEE 409
Query: 287 MVS 289
+ S
Sbjct: 410 LAS 412
>gi|297665702|ref|XP_002811186.1| PREDICTED: SPOC domain-containing protein 1 [Pongo abelii]
Length = 1158
Score = 50.8 bits (120), Expect = 0.001, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 42/75 (56%)
Query: 227 VAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEE 286
+A E+ +++ + G Y+ KYRS+LFNL DP N D KV+ G V P L++MSS +
Sbjct: 595 IAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGAVTPYDLVRMSSMQ 654
Query: 287 MVSDGSRRLNQQIKK 301
+ R Q +K
Sbjct: 655 LAPQELARWRDQEEK 669
>gi|403293239|ref|XP_003937628.1| PREDICTED: LOW QUALITY PROTEIN: SPOC domain-containing protein 1
[Saimiri boliviensis boliviensis]
Length = 1200
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%)
Query: 227 VAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEE 286
+A E+ +++ + G Y+ KYRS+LFNL DP N D +V+ G V P L++MSS +
Sbjct: 637 IAAGIEAALWDLTQGTDGRYKAKYRSLLFNLRDPRNLDLFLRVVHGDVNPYDLVRMSSMQ 696
Query: 287 MV 288
+
Sbjct: 697 LA 698
>gi|449486437|ref|XP_002194548.2| PREDICTED: death-inducer obliterator 1 [Taeniopygia guttata]
Length = 2319
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 3/103 (2%)
Query: 187 KCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTY 246
+ N R+ IR L + L K + D+ V + + +VA+ E MF + + Y
Sbjct: 683 QPNSQIRQNIRRSLKEILWKRVNDSDDLV---MTESEVGKVALNIEKEMFNLFQGTDNRY 739
Query: 247 EVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
+ KYRSI+FNL DP+N +VL + L++M EE++S
Sbjct: 740 KSKYRSIMFNLKDPKNQGLFHRVLREEISLSKLVRMKPEELLS 782
>gi|255939243|ref|XP_002560391.1| Pc15g01750 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211585013|emb|CAP83061.1| Pc15g01750 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 306
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 11/118 (9%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
Y K RS+ NL + NP R +V+ G + + ++MS +E+ S R + +I+KE
Sbjct: 193 YRTKIRSLFQNLKNKSNPKLRVRVIEGEITADQFVRMSHDELRSVEQREADAKIQKENMD 252
Query: 306 DRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYW 358
+ + + S CG+CG +K T + Q +A CL+C + W
Sbjct: 253 KAMVAQQERSI-----SKSLQCGKCGQRKVT-YTEAQTRAADEPMTLFCTCLHCGKSW 304
>gi|380804173|gb|AFE73962.1| death-inducer obliterator 1 isoform b, partial [Macaca mulatta]
Length = 243
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 7/121 (5%)
Query: 173 PASAVVPQKLVSMI----KCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVA 228
P ++ P +L +M + N R+ IR L + L K + D+ + + + ++A
Sbjct: 19 PTASPAPGRLGAMSAAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLI---MTENEVGKIA 75
Query: 229 ITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMV 288
+ E MF + + Y+ KYRSI+FNL DP+N +VL + L+++ EE+V
Sbjct: 76 LHIEKEMFNLFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELV 135
Query: 289 S 289
S
Sbjct: 136 S 136
>gi|348685682|gb|EGZ25497.1| transcription elongation factor [Phytophthora sojae]
Length = 305
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 58/126 (46%), Gaps = 15/126 (11%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
Y KYR + FNL +N + R+ +L +V + L+KM++EE+ ++ R ++++ +
Sbjct: 182 YMAKYRQLSFNL--KKNGELRQNLLDDNVSGDQLVKMTAEELATEEKRAQIEKLRDDAFQ 239
Query: 306 DRYLPWKGGYLGPIYHSTR-------YMCGRCGHKKTTNHGNDQNSSAKR-----IKCLN 353
+ L W I T + CGRC KT+N Q SA + C N
Sbjct: 240 EARLDWAEANHDKIQKQTGTEGTKGLFTCGRCKSSKTSNT-QKQTRSADEPMTVFVMCHN 298
Query: 354 CYQYWE 359
C W+
Sbjct: 299 CGNRWK 304
>gi|70991879|ref|XP_750788.1| PHD finger domain protein [Aspergillus fumigatus Af293]
gi|66848421|gb|EAL88750.1| PHD finger domain protein, putative [Aspergillus fumigatus Af293]
Length = 884
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 85/168 (50%), Gaps = 28/168 (16%)
Query: 140 APRSKKLVGSEFIVTEETNSLDNVDAEAIREEKPASAVVPQKLVSMIKCNDYFRERIREK 199
AP S++ S+ T+E+ +LD + A R ASA+V KL F ++I +
Sbjct: 259 APPSRQSSVSQKTTTQESGTLDEISNPARRSA--ASALV--KL---------FVDQISDA 305
Query: 200 LYKALSKVS-GEVDEEVQDKLNGCDPIRVAITAESLMFEKW----GHSFGTYEVKYRSIL 254
+ K+ G +E+ +L + E M++ G Y+++ R+IL
Sbjct: 306 QKQGSFKLPEGRSAKEIAQQL--------GFSIEKAMYQNICGGSGEPTEPYKLQLRTIL 357
Query: 255 FNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKE 302
FN+ +NP R ++L+G + P+AL KMSS++M S+ + + +I++E
Sbjct: 358 FNVK--KNPSLRDRLLVGSLLPDALSKMSSQDMASEELLQKDAEIRRE 403
>gi|406865033|gb|EKD18076.1| transcription elongation factor S-II [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 301
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 58/137 (42%), Gaps = 11/137 (8%)
Query: 228 AITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEM 287
AI E F+ + Y K RS+ NL N + V+ G + PE + MS EE+
Sbjct: 169 AIEVEKAAFDAFKGDTPEYRSKLRSLFQNLKAISNRELAPAVMSGEIPPEKFVVMSHEEL 228
Query: 288 VSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAK 347
S R+ +++++K+ +P + S CG+CG KK + + Q SA
Sbjct: 229 KSSERRKEDEKLQKDNMKKAQVPMAEKSI-----SDALKCGKCGQKKVS-YSQAQTRSAD 282
Query: 348 R-----IKCLNCYQYWE 359
+C C W+
Sbjct: 283 EPMTTFCECTVCGNRWK 299
>gi|70953587|ref|XP_745885.1| transcription elongation factor s-ii [Plasmodium chabaudi chabaudi]
gi|56526345|emb|CAH78009.1| transcription elongation factor s-ii, putative [Plasmodium chabaudi
chabaudi]
Length = 364
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 120/277 (43%), Gaps = 64/277 (23%)
Query: 43 ITCQLLVSTQLVRHLLPLTKHPRQKIQDTASELILSWRSLFLEQMKGDEENGSFAICGEI 102
I +L T++ + TK + I++ + EL+ W+++ AI +
Sbjct: 54 INKDILKQTKIGVTVNKFTKINNESIKNISKELVDKWKTI--------------AIKEKN 99
Query: 103 KSANVEIAKGKRQITSDEFEQALDVEVVKVRRVDQKGAPRSKKLVGSEFIVTEETNSLDN 162
+ N+E K ++ DE E A D V++KG KK+ + +LDN
Sbjct: 100 SNKNLENIKKRKH---DEAENAND-------NVNEKGPELKKKIAPT---------NLDN 140
Query: 163 VDAEAIREEKPASAVVPQ---------KLVSMIKC-------------NDYFRERIREKL 200
++ I E+K + ++ + K ++++ +D R++ ++ L
Sbjct: 141 -NSTHINEDKENNTIITKSYAQNSNENKKINIVNIEEMQHWNYSGKIHHDVLRDKAKQFL 199
Query: 201 YKALSKVSGEVDEEVQ--DKLNGCDPIRVAITAE--SLMFEKWGHSFGTYEVKYRSILFN 256
+KA + G D + D+ N D I I E + EK +S Y ++ +SI FN
Sbjct: 200 FKAF--IVGSHDNLLHLIDR-NKLDNIIYNIENELYKIFIEK-KNSQKEYNMQLKSIKFN 255
Query: 257 LMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSR 293
L D +NP+F K+ ++ L M+S++M SD +
Sbjct: 256 LSDKKNPNFNEKIYAEYISARTLATMNSQDMASDEKK 292
>gi|344304668|gb|EGW34900.1| hypothetical protein SPAPADRAFT_131482 [Spathaspora passalidarum
NRRL Y-27907]
Length = 296
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 74/165 (44%), Gaps = 19/165 (11%)
Query: 200 LYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFE-KWGHSFGTYEVKYRSILFNLM 258
LY +L+ G+ E + +++A ES +F+ ++ +Y K RS NL
Sbjct: 144 LYTSLAVERGDPSELI---------LKIASEIESEVFKSEYSKVTDSYRNKLRSFTMNLR 194
Query: 259 DPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGP 318
+ +NP+ R ++L + IKM+ EM + ++ +++ K+ D G
Sbjct: 195 NKKNPELRERLLTQAILAANFIKMTPSEMAPESLKKEIEKLNKQNLFD-----AQGATEK 249
Query: 319 IYHSTRYMCGRCGHKKTTNHGNDQNSSAKRI----KCLNCYQYWE 359
+ R+ CG+C HKK + + S+ + + C NC W+
Sbjct: 250 RAVTDRFTCGKCKHKKVSYYQMQTRSADEPLTTFCTCENCGNRWK 294
>gi|351714883|gb|EHB17802.1| Death-inducer obliterator 1 [Heterocephalus glaber]
Length = 2261
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 70/147 (47%), Gaps = 7/147 (4%)
Query: 143 SKKLVGSEFIVTEETNSLDNVDAEAIREEKPASAVVPQKLVSMIKCNDYFRERIREKLYK 202
SKK +GS +V S+ A + PA+ + + + N R+ IR L +
Sbjct: 630 SKKALGSAALV----GSIRKPAATSAPTTVPATGRLGGTGSAQSQPNSQIRQNIRRSLKE 685
Query: 203 ALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPEN 262
L K + D+ + + + ++A+ E MF + + Y+ KYRSI+FNL DP+N
Sbjct: 686 ILWKRVNDSDDLI---MTENEVGKIALHIEKEMFNLFQVTDNRYKSKYRSIMFNLKDPKN 742
Query: 263 PDFRRKVLLGHVKPEALIKMSSEEMVS 289
+VL + L++M EE+VS
Sbjct: 743 QGLFHRVLREEISLAKLVRMKPEELVS 769
>gi|149024308|gb|EDL80805.1| transcription elongation factor A (SII), 3 [Rattus norvegicus]
Length = 299
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 7/104 (6%)
Query: 182 LVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGH 241
L S D R++ E L AL + +++ +D CD ++A E+ ++++
Sbjct: 177 LASCYLTGDSVRDKCVEMLSAAL-----KAEDDFKDYGVNCD--KLASEIETHIYQELKS 229
Query: 242 SFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSE 285
+ Y + RS + NL DP NP RR VL G + PE + KM++E
Sbjct: 230 TDMKYRNRVRSRISNLKDPRNPGLRRNVLSGTISPELIAKMTAE 273
>gi|402218151|gb|EJT98229.1| transcription elongation factor [Dacryopinax sp. DJM-731 SS1]
Length = 311
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 124/336 (36%), Gaps = 62/336 (18%)
Query: 32 IAALDQLHKSSITCQLLVSTQLVRHLLPLTKHPRQKIQDTASELILSWRSLFLEQMKGDE 91
+ L +L +T LL T+ + L H ++ +TA E++ W++ +E K ++
Sbjct: 28 VGLLQKLRGHGVTEDLLKETKAGLAVGKLRSHANAQVAETAKEVVRRWKA-EVEGQKSEK 86
Query: 92 ENGSFAICGEIKSANVEIAKGKRQITSDEFEQALDVEVVKVRRVDQKGAPRSKKLVGSEF 151
+ GS + G K N + P + GS
Sbjct: 87 KAGSSSPSGGAKKVNPK--------------------------------PIQTSVPGS-- 112
Query: 152 IVTEETNSLDNVDAEAIREEKPASAVVPQKLVSMIKCNDYF---RERIREKLYKALSKVS 208
T+S A A + ++V +K ND R+ LY AL+ S
Sbjct: 113 -----TSSKSPAPATAGPHTPLSPSLVRTTATDGVKLNDSGDEKRDTCMRLLYDALASDS 167
Query: 209 GEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRK 268
+++ I I + L K +S Y K RS+ NL + NP R
Sbjct: 168 TAPSDQIAK-------IARKIEEQVLSLNK-NNSGNPYRTKIRSLYLNLKEKSNPGLREA 219
Query: 269 VLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCG 328
V+ G + L MS +EM S+ +Q + +R ++ L G + + C
Sbjct: 220 VVSGELSVPRLCTMSVQEMASE-----ERQAESKRIEEQNLFKAKGAEEAGAETDAFKCF 274
Query: 329 RCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
RCG +K T + Q SA + C+NC W+
Sbjct: 275 RCGLRK-TRYTQAQTRSADEPMTTFVTCVNCGNRWK 309
>gi|327271898|ref|XP_003220724.1| PREDICTED: death-inducer obliterator 1-like [Anolis carolinensis]
Length = 2331
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 3/107 (2%)
Query: 183 VSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHS 242
S + N R+ IR L + L K + D+ V + + ++A+ E MF + +
Sbjct: 823 ASQSQPNSQIRQNIRRSLKEILWKRVNDSDDLV---MTESEVGKIALNIEKEMFNLFHAT 879
Query: 243 FGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
Y+ KYRSI+FNL DP+N +VL + L++M EE++S
Sbjct: 880 DNRYKSKYRSIMFNLKDPKNQGLFHRVLREDLPLSRLVRMKPEELLS 926
>gi|441637983|ref|XP_004090096.1| PREDICTED: death-inducer obliterator 1 [Nomascus leucogenys]
Length = 1185
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 61/118 (51%), Gaps = 1/118 (0%)
Query: 173 PASAVVPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPI-RVAITA 231
P ++ P +L +M +IR+ + ++L ++ + + D L + + +VA+
Sbjct: 643 PTASPAPGRLGAMSAAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLLMTENEVGKVALHI 702
Query: 232 ESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
E MF + + Y+ KYRSI+FNL DP+N +VL + L+++ EE+VS
Sbjct: 703 EKEMFNLFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVS 760
>gi|242096284|ref|XP_002438632.1| hypothetical protein SORBIDRAFT_10g023180 [Sorghum bicolor]
gi|241916855|gb|EER89999.1| hypothetical protein SORBIDRAFT_10g023180 [Sorghum bicolor]
Length = 732
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 227 VAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEE 286
+A+ E +F+ G Y+ K RS+LFNL D NP R +VL G + P+ L M++EE
Sbjct: 338 LALRIEEDLFQLCGGVSKKYKEKGRSLLFNLKDKSNPVLRGQVLSGEITPKCLCSMTTEE 397
Query: 287 MVSD--GSRRL 295
+ S +RRL
Sbjct: 398 LASKELSARRL 408
>gi|395329637|gb|EJF62023.1| transcription elongation factor [Dichomitus squalens LYAD-421 SS1]
Length = 300
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 72/175 (41%), Gaps = 20/175 (11%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVK 249
D R++ E +Y AL SG E + L+ I + A++ G + Y+ K
Sbjct: 139 DKTRDKCAELIYDALVFDSGAPSELI---LSRAKDIEKTVLADN------GGANANYKAK 189
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYL 309
RS+ NL D NP R V+ G + L KMSS +M S+ + + +IK+E L
Sbjct: 190 IRSLFVNLKDKNNPGLRECVISGELPVSKLCKMSSADMASEERKAADAKIKEEN-----L 244
Query: 310 PWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
G + + C RC +K + Q SA + C C W+
Sbjct: 245 FKTLGAGEQEAETDAFQCPRCKQRK-CRYRQQQTRSADEPMTTFVTCTVCKNRWK 298
>gi|315046468|ref|XP_003172609.1| transcription elongation factor S-II [Arthroderma gypseum CBS
118893]
gi|311342995|gb|EFR02198.1| transcription elongation factor S-II [Arthroderma gypseum CBS
118893]
Length = 297
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 64/150 (42%), Gaps = 16/150 (10%)
Query: 219 LNGCDPIRV----AITAESLMFEKWG-HSFGTYEVKYRSILFNLMDPENPDFRRKVLLGH 273
L +P R A E+ F+ +G + Y K RS+ NL + N R +VL
Sbjct: 152 LGSTEPSRTVLQKATEVEAAAFKAFGPETKEAYRTKIRSLYQNLKNKSNLSLRTRVLTNE 211
Query: 274 VKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHK 333
+ P+ + M+ +E+ SD R + +I+KE + G I S CG+CG +
Sbjct: 212 IAPDRFVNMTHDELKSDERREEDLKIQKENMDKAMV---GQPERSISKS--LQCGKCGQR 266
Query: 334 KTTNHGNDQNSSAKR-----IKCLNCYQYW 358
K T + Q +A CL C + W
Sbjct: 267 KVT-YTEAQTRAADEPMTLFCTCLACGKSW 295
>gi|400603045|gb|EJP70643.1| transcription elongation factor S-II [Beauveria bassiana ARSEF
2860]
Length = 309
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 61/142 (42%), Gaps = 11/142 (7%)
Query: 223 DPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKM 282
D + ++ E+ F + Y+ K RS+ NL + N + V+ + PE + M
Sbjct: 172 DVLAKSVAVEAAAFAHFKGQGADYKKKIRSLFTNLKNKSNRALGQSVMASEIPPERFVAM 231
Query: 283 SSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQ 342
+ +++ SD R+ +++KE +P + S CG+C KK ++ Q
Sbjct: 232 TDDDLKSDDQRKKEIELEKENMKKAQVP-----MAEKSISDSLECGKC-KKKQVSYTQAQ 285
Query: 343 NSSAKR-----IKCLNCYQYWE 359
SA +C+NC W+
Sbjct: 286 TRSADEPMTTFCECMNCGNRWK 307
>gi|328861258|gb|EGG10362.1| hypothetical protein MELLADRAFT_33850 [Melampsora larici-populina
98AG31]
Length = 264
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 9/122 (7%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
Y+ K RS++FNL D NP R V+ G + L M +M S+ + ++++ +E
Sbjct: 147 YKNKMRSLIFNLKDKNNPGLREAVVSGEISSMKLCSMGPADMASEERKAQDRKLAEENL- 205
Query: 306 DRYLPWKGGYLGPIYHST-RYMCGRCGHKKTTNHGNDQNSSAKRIKCLNCYQYWESTTAL 364
+K GP T + CGRCG +K T + S+ + + ++++ T+
Sbjct: 206 -----FKARGAGPQQAETDAFRCGRCGQRKCTYYQMQTRSADEPMTV--SFEFFFYMTSF 258
Query: 365 YG 366
+G
Sbjct: 259 FG 260
>gi|383415435|gb|AFH30931.1| death-inducer obliterator 1 isoform b [Macaca mulatta]
Length = 1186
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 7/121 (5%)
Query: 173 PASAVVPQKLVSMI----KCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVA 228
P ++ P +L +M + N R+ IR L + L K + D+ + + + ++A
Sbjct: 644 PTASPAPGRLGAMSAAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLI---MTENEVGKIA 700
Query: 229 ITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMV 288
+ E MF + + Y+ KYRSI+FNL DP+N +VL + L+++ EE+V
Sbjct: 701 LHIEKEMFNLFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELV 760
Query: 289 S 289
S
Sbjct: 761 S 761
>gi|195579326|ref|XP_002079513.1| GD21972 [Drosophila simulans]
gi|194191522|gb|EDX05098.1| GD21972 [Drosophila simulans]
Length = 146
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
Y+ + RS + NL DP+NP R + G V + L KM+ EEM SD ++L ++ KE +
Sbjct: 32 YKNRIRSRVANLKDPKNPGLRGNFMCGAVTAKQLAKMTPEEMASDEMKKLREKFVKEAIN 91
Query: 306 DRYL 309
D L
Sbjct: 92 DAQL 95
>gi|328876868|gb|EGG25231.1| RNA polymerase II elongation factor [Dictyostelium fasciculatum]
Length = 325
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 68/142 (47%), Gaps = 20/142 (14%)
Query: 226 RVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSE 285
+ A+ ES +FE +G + Y+VK RSI+FNL N ++ +L + M +
Sbjct: 194 QAAVEIESQLFETYGGANSDYKVKARSIIFNL--KSNHLLKKNILSKTLTVTRFCTMDAT 251
Query: 286 EMVSDGSRRLNQQIKKERASDRYLPW--KGGYLGPIYHST-RYMCGRCGHKKTTNHGNDQ 342
EM N+++K+ER +R L + + L +T ++ CG+C +K T + Q
Sbjct: 252 EMA-------NKELKEER--ERMLKYSREAATLSREAATTDQFQCGKCKQRKCT-YFQLQ 301
Query: 343 NSSAKR-----IKCLNCYQYWE 359
SA + C+NC W+
Sbjct: 302 TRSADEPLTTFVTCVNCNNRWK 323
>gi|449437376|ref|XP_004136468.1| PREDICTED: uncharacterized protein LOC101216628 [Cucumis sativus]
gi|449503562|ref|XP_004162064.1| PREDICTED: uncharacterized protein LOC101228635 [Cucumis sativus]
Length = 1124
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%)
Query: 224 PIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMS 283
P +A+ E +F+ + Y+ K RS+LFNL D NP+ R +V+ G + PE L M+
Sbjct: 369 PESLALKIEEELFKLFSGVNKKYKEKGRSLLFNLKDRNNPELRERVMSGEITPERLCSMT 428
Query: 284 SEEMVS 289
+EE+ S
Sbjct: 429 AEELAS 434
>gi|198432582|ref|XP_002121512.1| PREDICTED: similar to death inducer-obliterator 1 [Ciona
intestinalis]
Length = 1728
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Query: 196 IREKLYKALSKVSGEVDEEVQD-KLNGCDPIRVAITAESLMFEKWGHSFGTYEVKYRSIL 254
IR + K++ + + EE +D +++ R+ E + + +G + Y+ +YRSI+
Sbjct: 772 IRHNVKKSILGILSKRSEESEDLRMHPSSITRLVDKIEDSLHKLFGETNVKYKNRYRSIM 831
Query: 255 FNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
FNL D N RKV++G V L++M++E+M S
Sbjct: 832 FNLKDERNHGLWRKVIIGDVTTSELVQMTAEQMAS 866
>gi|322795023|gb|EFZ17875.1| hypothetical protein SINV_15581 [Solenopsis invicta]
Length = 695
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 67/122 (54%), Gaps = 3/122 (2%)
Query: 169 REEKPASAVVPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQD-KLNGCDPIRV 227
+E KP+ + + Q ++ +K + E IR + K L+++ +E +D KL + +
Sbjct: 112 QEAKPSPSQLKQTKLTPVKKPET--EPIRVNIRKTLTELLSSRIKETEDLKLTDEEIADL 169
Query: 228 AITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEM 287
A E M++ + + Y+ KYRS++FN+ D +N RK+ + P+A++++S +EM
Sbjct: 170 AFNIELEMYKYFKDTGSKYKAKYRSLVFNIKDTKNLTLFRKIADRSLTPDAVVRLSPDEM 229
Query: 288 VS 289
S
Sbjct: 230 AS 231
>gi|410227676|gb|JAA11057.1| death inducer-obliterator 1 [Pan troglodytes]
gi|410263506|gb|JAA19719.1| death inducer-obliterator 1 [Pan troglodytes]
gi|410304004|gb|JAA30602.1| death inducer-obliterator 1 [Pan troglodytes]
gi|410354255|gb|JAA43731.1| death inducer-obliterator 1 [Pan troglodytes]
Length = 1189
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 7/121 (5%)
Query: 173 PASAVVPQKLVSMI----KCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVA 228
P ++ P +L +M + N R+ IR L + L K + D+ + + + ++A
Sbjct: 647 PTASPAPGRLGAMSAAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLI---MTENEVGKIA 703
Query: 229 ITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMV 288
+ E MF + + Y+ KYRSI+FNL DP+N +VL + L+++ EE+V
Sbjct: 704 LHIEKEMFNLFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELV 763
Query: 289 S 289
S
Sbjct: 764 S 764
>gi|356515496|ref|XP_003526436.1| PREDICTED: uncharacterized protein LOC100808809 [Glycine max]
Length = 1143
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
Y+ K RS+LFNL D NP+ R +V+ G + PE L M++EE+ S
Sbjct: 436 YKEKGRSLLFNLKDRNNPELRERVMFGKIPPEQLCSMTAEELAS 479
>gi|156040461|ref|XP_001587217.1| transcription elongation factor s-ii [Sclerotinia sclerotiorum
1980]
gi|154696303|gb|EDN96041.1| transcription elongation factor s-ii [Sclerotinia sclerotiorum 1980
UF-70]
Length = 301
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 60/137 (43%), Gaps = 11/137 (8%)
Query: 228 AITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEM 287
A+ E F+ +G Y+ K RS+ NL N R++V+ G ++P + M+ EE+
Sbjct: 169 AMAVEQAAFDHFGGETKDYKEKLRSLFQNLKQVSNTQLRKRVMSGDIEPARFVVMTHEEL 228
Query: 288 VSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAK 347
S+ ++ + ++ E +P + S CG+C H+K ++ Q SA
Sbjct: 229 KSEEMKKKDDLLEMENMKKAQVP-----MAEKSISDALTCGKC-HQKKVSYSQAQTRSAD 282
Query: 348 R-----IKCLNCYQYWE 359
+C C W+
Sbjct: 283 EPMTTFCECQVCGHRWK 299
>gi|334312325|ref|XP_001376502.2| PREDICTED: death-inducer obliterator 1 [Monodelphis domestica]
Length = 2350
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 54/106 (50%), Gaps = 3/106 (2%)
Query: 184 SMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSF 243
S + N R+ IR L + L K + D+ + + + ++A+ E MF + +
Sbjct: 700 SQSQPNSQIRQNIRRSLKEILWKRVNDSDDLI---MTENEVGKIALHIEKEMFNLFQVTD 756
Query: 244 GTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
Y+ KYRSI+FNL DP+N +VL + L++M EE+VS
Sbjct: 757 NRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVS 802
>gi|149734279|ref|XP_001491643.1| PREDICTED: death-inducer obliterator 1 [Equus caballus]
Length = 2272
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 70/151 (46%), Gaps = 15/151 (9%)
Query: 143 SKKLVGSEFIVTEETNSLDNVDAEAIREEKPASAVVPQKL----VSMIKCNDYFRERIRE 198
SKKL GS +V + + P ++ P +L + + N R+ IR
Sbjct: 628 SKKLPGSAALV--------GAIRKPVASSAPLASTAPGRLGTSSPAPSQPNSQIRQNIRR 679
Query: 199 KLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLM 258
L + L K + D+ + + + ++A+ E MF + + Y+ KYRSI+FNL
Sbjct: 680 SLKEILWKRVSDSDDLI---MTENEVGKIALHIEKEMFNLFRVTDNRYKSKYRSIMFNLK 736
Query: 259 DPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
DP+N +VL + L++M EE+VS
Sbjct: 737 DPKNQGLFHRVLREEISLAKLVRMKPEELVS 767
>gi|395506689|ref|XP_003757663.1| PREDICTED: death-inducer obliterator 1 [Sarcophilus harrisii]
Length = 2351
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 54/106 (50%), Gaps = 3/106 (2%)
Query: 184 SMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSF 243
S + N R+ IR L + L K + D+ + + + ++A+ E MF + +
Sbjct: 698 SQSQPNSQIRQNIRRSLKEILWKRVNDSDDLI---MTENEVGKIALHIEKEMFNLFQVTD 754
Query: 244 GTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
Y+ KYRSI+FNL DP+N +VL + L++M EE+VS
Sbjct: 755 NRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVS 800
>gi|363755550|ref|XP_003647990.1| hypothetical protein Ecym_7343 [Eremothecium cymbalariae
DBVPG#7215]
gi|356892026|gb|AET41173.1| hypothetical protein Ecym_7343 [Eremothecium cymbalariae
DBVPG#7215]
Length = 306
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 68/150 (45%), Gaps = 16/150 (10%)
Query: 189 NDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKW--GHSFGTY 246
ND R+ + + Y AL+K S + + + +AI E M++ + Y
Sbjct: 142 NDKLRDMVIKAFYDALAKQSEHPPQSI---------LAIAIDIEKHMYKLKIPAENDKGY 192
Query: 247 EVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASD 306
+ KYR I N++ NPD + K+ G + P+ L+ +E+ + ++ ++I K+
Sbjct: 193 KDKYRVIYSNVISKNNPDLKHKITNGDISPDYLVNCDPKELAPEHLKKKLEEIAKQ---- 248
Query: 307 RYLPWKGGYLGPIYHSTRYMCGRCGHKKTT 336
+G L + R+ CG+C KK +
Sbjct: 249 NLFNAQGATLERSV-TDRFQCGKCKEKKVS 277
>gi|432905920|ref|XP_004077476.1| PREDICTED: PHD finger protein 3-like [Oryzias latipes]
Length = 1575
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 59/116 (50%), Gaps = 8/116 (6%)
Query: 174 ASAVVPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAES 233
A+A+ +K VS+ + R +R+ L L++ E D + + VA E
Sbjct: 613 ATALASKKPVSV----EAIRRSVRDSLKDILTQRLKESDLHISVERAS----EVAKKTER 664
Query: 234 LMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
+F + + Y+ KYRS++FNL D +N ++VL G + P LI+MS EE+ S
Sbjct: 665 ELFHLFKDTDHKYKNKYRSLIFNLKDTKNNVLFKRVLKGEISPANLIRMSPEELAS 720
>gi|320164226|gb|EFW41125.1| transcription elongation factor A [Capsaspora owczarzaki ATCC
30864]
Length = 433
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 59/123 (47%), Gaps = 21/123 (17%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKK---E 302
Y+ RS +FNL +N DFR+ VL G + PE + M+SEEM ++ LN + KK E
Sbjct: 194 YKTAVRSKMFNLK--QNEDFRKAVLNGSIPPEKVAVMTSEEM---ATKELNAERKKLTTE 248
Query: 303 RASDRYLPWKGGYLGPIYHSTRYM-CGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQ 356
+D +P P T + CG+CG K+ ++ Q S+ + C C
Sbjct: 249 AMNDAQMP------APKMSKTDQLRCGKCG-KRDASYFQLQTRSSDEPMTTFVTCNVCGH 301
Query: 357 YWE 359
W+
Sbjct: 302 NWK 304
>gi|384495291|gb|EIE85782.1| hypothetical protein RO3G_10492 [Rhizopus delemar RA 99-880]
Length = 511
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 227 VAITAESLMFEKWGHSFGT----YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKM 282
+A + ES MF + G T Y+ K+RS+L NL D N F+ +++ G + P LIKM
Sbjct: 126 LAKSIESTMFSQLGDRGRTCGEVYKNKFRSLLHNLKDKANQTFQLRIVTGDLSPLELIKM 185
Query: 283 SSEEMVS 289
SSE+M +
Sbjct: 186 SSEDMAN 192
>gi|302842544|ref|XP_002952815.1| hypothetical protein VOLCADRAFT_93587 [Volvox carteri f.
nagariensis]
gi|300261855|gb|EFJ46065.1| hypothetical protein VOLCADRAFT_93587 [Volvox carteri f.
nagariensis]
Length = 233
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 18/129 (13%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
Y+ R+++ +L N D RR+VL G V+P+ L+ M ++ + + ++ +ER +
Sbjct: 106 YKAAARTLVASLK--RNADLRRRVLSGQVRPDELVGMGVRQLATPQQQEEYARL-QERET 162
Query: 306 DRYLPWKGGYLGPIYHSTRYMCGRCGHKKT--------------TNHGNDQNSSAKRIKC 351
R G I S Y+CGRCG + T D S++ + C
Sbjct: 163 RRVTLAGHGSAASISTSD-YVCGRCGGRSCDYLDSGRRDIGKCETWGSKDGPGSSRLVTC 221
Query: 352 LNCYQYWES 360
L C WE+
Sbjct: 222 LGCGHRWET 230
>gi|332262279|ref|XP_003280189.1| PREDICTED: death-inducer obliterator 1 isoform 2 [Nomascus
leucogenys]
gi|332262281|ref|XP_003280190.1| PREDICTED: death-inducer obliterator 1 isoform 3 [Nomascus
leucogenys]
Length = 2236
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 61/125 (48%), Gaps = 15/125 (12%)
Query: 173 PASAVVPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPI------- 225
P ++ P +L +M +IR+ + ++L ++ + ++N D +
Sbjct: 643 PTASPAPGRLGAMSAAPSQPNSQIRQNIRRSLKEI-------LWKRVNDSDDLLMTENEV 695
Query: 226 -RVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSS 284
+VA+ E MF + + Y+ KYRSI+FNL DP+N +VL + L+++
Sbjct: 696 GKVALHIEKEMFNLFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKP 755
Query: 285 EEMVS 289
EE+VS
Sbjct: 756 EELVS 760
>gi|302927325|ref|XP_003054473.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256735414|gb|EEU48760.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 303
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 62/142 (43%), Gaps = 11/142 (7%)
Query: 223 DPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKM 282
D I A++ E + + Y+ K RS+ NL + N D R+V+ G + + + M
Sbjct: 166 DVIAKAVSVEHAAYTRNKGETPEYKKKIRSLFTNLKNKSNKDLGRRVMSGDISADRFVVM 225
Query: 283 SSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQ 342
+ +E+ S+ R+ +++KE +P + S CGRC KK ++ Q
Sbjct: 226 TDDELKSEDQRKKEVELEKENMKKAQVP-----MAEKSISEDLQCGRC-KKKQVSYTQAQ 279
Query: 343 NSSAKR-----IKCLNCYQYWE 359
+A +C+ C W+
Sbjct: 280 TRAADEPMTTFCECMACGHRWK 301
>gi|58257648|dbj|BAA20791.2| KIAA0333 [Homo sapiens]
Length = 1223
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 7/121 (5%)
Query: 173 PASAVVPQKLVSMI----KCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVA 228
P ++ P +L +M + N R+ IR L + L K + D+ + + + ++A
Sbjct: 681 PMASPAPGRLGAMSAAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLI---MTENEVGKIA 737
Query: 229 ITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMV 288
+ E MF + + Y+ KYRSI+FNL DP+N +VL + L+++ EE+V
Sbjct: 738 LHIEKEMFNLFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELV 797
Query: 289 S 289
S
Sbjct: 798 S 798
>gi|44971658|gb|AAS49898.1| death inducer-obliterator-2 [Homo sapiens]
Length = 1189
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 7/121 (5%)
Query: 173 PASAVVPQKLVSMI----KCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVA 228
P ++ P +L +M + N R+ IR L + L K + D+ + + + ++A
Sbjct: 647 PMASPAPGRLGAMSAAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLI---MTENEVGKIA 703
Query: 229 ITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMV 288
+ E MF + + Y+ KYRSI+FNL DP+N +VL + L+++ EE+V
Sbjct: 704 LHIEKEMFNLFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELV 763
Query: 289 S 289
S
Sbjct: 764 S 764
>gi|119595732|gb|EAW75326.1| death inducer-obliterator 1, isoform CRA_e [Homo sapiens]
Length = 1225
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 7/121 (5%)
Query: 173 PASAVVPQKLVSMI----KCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVA 228
P ++ P +L +M + N R+ IR L + L K + D+ + + + ++A
Sbjct: 683 PMASPAPGRLGAMSAAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLI---MTENEVGKIA 739
Query: 229 ITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMV 288
+ E MF + + Y+ KYRSI+FNL DP+N +VL + L+++ EE+V
Sbjct: 740 LHIEKEMFNLFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELV 799
Query: 289 S 289
S
Sbjct: 800 S 800
>gi|149244436|ref|XP_001526761.1| hypothetical protein LELG_01589 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449155|gb|EDK43411.1| hypothetical protein LELG_01589 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 322
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 64/140 (45%), Gaps = 10/140 (7%)
Query: 225 IRVAITAESLMFE-KWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMS 283
+ VA ES +F+ ++ Y K R+ + L + +NP+ R ++L + E IKMS
Sbjct: 186 VAVAAEIESAVFKNEYLKVNEAYRNKLRTFVMQLRNKKNPELRERLLTRQITAERFIKMS 245
Query: 284 SEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQN 343
EM + ++ +++ K+ D G + R+ CG+C HKK + +
Sbjct: 246 PNEMAPEELKKEIEKMHKQNLFD-----AQGATEKRAVTDRFTCGKCKHKKVSYYQMQTR 300
Query: 344 SSAKRI----KCLNCYQYWE 359
S+ + + C NC W+
Sbjct: 301 SADEPLTTFCTCENCGNRWK 320
>gi|71044477|ref|NP_542987.2| death-inducer obliterator 1 isoform b [Homo sapiens]
gi|301129172|ref|NP_001180299.1| death-inducer obliterator 1 isoform b [Homo sapiens]
gi|168278571|dbj|BAG11165.1| death-inducer obliterator 1 [synthetic construct]
gi|223459792|gb|AAI37178.1| Death inducer-obliterator 1 [Homo sapiens]
Length = 1189
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 7/121 (5%)
Query: 173 PASAVVPQKLVSMI----KCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVA 228
P ++ P +L +M + N R+ IR L + L K + D+ + + + ++A
Sbjct: 647 PMASPAPGRLGAMSAAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLI---MTENEVGKIA 703
Query: 229 ITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMV 288
+ E MF + + Y+ KYRSI+FNL DP+N +VL + L+++ EE+V
Sbjct: 704 LHIEKEMFNLFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELV 763
Query: 289 S 289
S
Sbjct: 764 S 764
>gi|303277747|ref|XP_003058167.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460824|gb|EEH58118.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 920
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 4/59 (6%)
Query: 245 TYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKER 303
TY K R+++FNL DP NP R +VL G + P+ L +S E+ +R+ Q++++ER
Sbjct: 194 TYNAKARTLIFNLKDPSNPHLRGRVLRGELTPQVLCVLSPTEL----ARKDLQEMRRER 248
>gi|367020002|ref|XP_003659286.1| hypothetical protein MYCTH_2296116 [Myceliophthora thermophila ATCC
42464]
gi|347006553|gb|AEO54041.1| hypothetical protein MYCTH_2296116 [Myceliophthora thermophila ATCC
42464]
Length = 309
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 11/119 (9%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
Y K R ++ +L +N + R+VL G + P+ + M+ EE+ SD R ++ +++E
Sbjct: 195 YRNKIRGLMTSLKRKDNAELGRRVLDGEIPPDKFVVMTDEELASDAQRERDRALERENML 254
Query: 306 DRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
+P + S CG+CG KK + + Q SA +C C W+
Sbjct: 255 KAQVPMAQKSI-----SVDLQCGKCGKKKVS-YSQAQTRSADEPMTTFCECTVCGHRWK 307
>gi|402882034|ref|XP_003904560.1| PREDICTED: death-inducer obliterator 1 isoform 1 [Papio anubis]
gi|402882036|ref|XP_003904561.1| PREDICTED: death-inducer obliterator 1 isoform 2 [Papio anubis]
Length = 2239
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 7/121 (5%)
Query: 173 PASAVVPQKLVSMI----KCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVA 228
P ++ P +L +M + N R+ IR L + L K + D+ + + + ++A
Sbjct: 644 PTASPAPGRLGAMSAAPSQPNSQIRQNIRRSLKEILWKRVSDSDDLI---MTENEVGKIA 700
Query: 229 ITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMV 288
+ E MF + + Y+ KYRSI+FNL DP+N +VL + L+++ EE+V
Sbjct: 701 LHIEKEMFNLFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELV 760
Query: 289 S 289
S
Sbjct: 761 S 761
>gi|355562965|gb|EHH19527.1| Death-inducer obliterator 1 [Macaca mulatta]
Length = 2238
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 7/121 (5%)
Query: 173 PASAVVPQKLVSMI----KCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVA 228
P ++ P +L +M + N R+ IR L + L K + D+ + + + ++A
Sbjct: 644 PTASPAPGRLGAMSAAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLI---MTENEVGKIA 700
Query: 229 ITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMV 288
+ E MF + + Y+ KYRSI+FNL DP+N +VL + L+++ EE+V
Sbjct: 701 LHIEKEMFNLFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELV 760
Query: 289 S 289
S
Sbjct: 761 S 761
>gi|19075622|ref|NP_588122.1| transcription elongation regulator (predicted) [Schizosaccharomyces
pombe 972h-]
gi|59800464|sp|Q9Y7V2.3|BYE1_SCHPO RecName: Full=Transcription factor bye1
gi|4539285|emb|CAB39909.1| transcription elongation regulator (predicted) [Schizosaccharomyces
pombe]
Length = 721
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 67/134 (50%), Gaps = 11/134 (8%)
Query: 180 QKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQ----DKLNGCDPIRVAITAESLM 235
+K +S+ D + +R+ + KA V ++ E+ + L + +A+ E +M
Sbjct: 201 EKELSLHTSIDEIQNPVRKSVAKAWVSVFEKIIEKAKLEGVQGLEDLNSTSLALQLEHIM 260
Query: 236 FE----KWGHSF---GTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMV 288
F HS Y K+R++ FNL+D +NP FR +VL + L+ +SSEEM
Sbjct: 261 FMVLSYTTDHSLTPNNKYREKFRALRFNLVDDKNPAFRARVLKNEISFNDLVNLSSEEMA 320
Query: 289 SDGSRRLNQQIKKE 302
+ + L ++I+++
Sbjct: 321 NPDLKNLAEEIRQQ 334
>gi|403282553|ref|XP_003932709.1| PREDICTED: death-inducer obliterator 1 [Saimiri boliviensis
boliviensis]
Length = 2234
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 69/147 (46%), Gaps = 7/147 (4%)
Query: 143 SKKLVGSEFIVTEETNSLDNVDAEAIREEKPASAVVPQKLVSMIKCNDYFRERIREKLYK 202
SKK GS +V ++ ++ PA+ + + + N R+ IR L +
Sbjct: 624 SKKFPGSAALV----GAVRKPVVPSVPTASPAAGRLGAMGAAPSQPNSQIRQNIRRSLKE 679
Query: 203 ALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPEN 262
L K + D+ + + + ++A+ E MF + + Y+ KYRSI+FNL DP+N
Sbjct: 680 ILWKRVNDSDDLI---MTENEVGKIALHIEKEMFNLFHVTDNRYKSKYRSIMFNLKDPKN 736
Query: 263 PDFRRKVLLGHVKPEALIKMSSEEMVS 289
+VL + L++M EE+VS
Sbjct: 737 QGLFHRVLREEISLAKLVRMKPEELVS 763
>gi|109091362|ref|XP_001086709.1| PREDICTED: death-inducer obliterator 1 isoform 1 [Macaca mulatta]
Length = 2238
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 7/121 (5%)
Query: 173 PASAVVPQKLVSMI----KCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVA 228
P ++ P +L +M + N R+ IR L + L K + D+ + + + ++A
Sbjct: 644 PTASPAPGRLGAMSAAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLI---MTENEVGKIA 700
Query: 229 ITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMV 288
+ E MF + + Y+ KYRSI+FNL DP+N +VL + L+++ EE+V
Sbjct: 701 LHIEKEMFNLFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELV 760
Query: 289 S 289
S
Sbjct: 761 S 761
>gi|67537382|ref|XP_662465.1| hypothetical protein AN4861.2 [Aspergillus nidulans FGSC A4]
gi|40741749|gb|EAA60939.1| hypothetical protein AN4861.2 [Aspergillus nidulans FGSC A4]
Length = 386
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKE 302
Y K RS+ NL + NP R +VL V PE +KM+ EE+ SD R +++I+KE
Sbjct: 191 YRTKIRSLFQNLKNKSNPTLRVRVLSNEVTPERFVKMTHEELRSDEQREKDRKIQKE 247
>gi|297259403|ref|XP_002798112.1| PREDICTED: death-inducer obliterator 1 isoform 2 [Macaca mulatta]
Length = 2250
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 7/121 (5%)
Query: 173 PASAVVPQKLVSMI----KCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVA 228
P ++ P +L +M + N R+ IR L + L K + D+ + + + ++A
Sbjct: 656 PTASPAPGRLGAMSAAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLI---MTENEVGKIA 712
Query: 229 ITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMV 288
+ E MF + + Y+ KYRSI+FNL DP+N +VL + L+++ EE+V
Sbjct: 713 LHIEKEMFNLFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELV 772
Query: 289 S 289
S
Sbjct: 773 S 773
>gi|258575137|ref|XP_002541750.1| predicted protein [Uncinocarpus reesii 1704]
gi|237902016|gb|EEP76417.1| predicted protein [Uncinocarpus reesii 1704]
Length = 888
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
Query: 240 GHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQI 299
G Y+ + R+ILFN+ +NP R +L+G + P+A KMS+++M S+ R+ + +I
Sbjct: 373 GEPNDAYKQQMRTILFNVR--KNPSLRDSLLVGRISPDAFSKMSTQDMASEELRQRDDEI 430
Query: 300 KKE 302
K+E
Sbjct: 431 KRE 433
>gi|410227672|gb|JAA11055.1| death inducer-obliterator 1 [Pan troglodytes]
gi|410227678|gb|JAA11058.1| death inducer-obliterator 1 [Pan troglodytes]
gi|410354253|gb|JAA43730.1| death inducer-obliterator 1 [Pan troglodytes]
Length = 2237
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 7/121 (5%)
Query: 173 PASAVVPQKLVSMI----KCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVA 228
P ++ P +L +M + N R+ IR L + L K + D+ + + + ++A
Sbjct: 647 PTASPAPGRLGAMSAAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLI---MTENEVGKIA 703
Query: 229 ITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMV 288
+ E MF + + Y+ KYRSI+FNL DP+N +VL + L+++ EE+V
Sbjct: 704 LHIEKEMFNLFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELV 763
Query: 289 S 289
S
Sbjct: 764 S 764
>gi|344306328|ref|XP_003421840.1| PREDICTED: death-inducer obliterator 1 [Loxodonta africana]
Length = 2247
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 59/116 (50%), Gaps = 9/116 (7%)
Query: 174 ASAVVPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAES 233
A++ P + S I+ N R ++E L+K +VS D + + G RVA+ E
Sbjct: 664 AASPAPSQPNSQIRQN--IRRSLKEILWK---RVSDSDDLIMTENEVG----RVALRIEK 714
Query: 234 LMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
MF + + Y+ KYRSI+FNL DP+N +VL + L++M EE+ S
Sbjct: 715 EMFSLFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELAS 770
>gi|426392422|ref|XP_004062551.1| PREDICTED: death-inducer obliterator 1 isoform 2 [Gorilla gorilla
gorilla]
gi|426392424|ref|XP_004062552.1| PREDICTED: death-inducer obliterator 1 isoform 3 [Gorilla gorilla
gorilla]
Length = 2239
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 7/121 (5%)
Query: 173 PASAVVPQKLVSMI----KCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVA 228
P ++ P +L +M + N R+ IR L + L K + D+ + + + ++A
Sbjct: 646 PTASPAPGRLGAMSAAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLI---MTENEVGKIA 702
Query: 229 ITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMV 288
+ E MF + + Y+ KYRSI+FNL DP+N +VL + L+++ EE+V
Sbjct: 703 LHIEKEMFNLFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELV 762
Query: 289 S 289
S
Sbjct: 763 S 763
>gi|397479128|ref|XP_003810881.1| PREDICTED: death-inducer obliterator 1 isoform 1 [Pan paniscus]
gi|397479130|ref|XP_003810882.1| PREDICTED: death-inducer obliterator 1 isoform 2 [Pan paniscus]
Length = 2240
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 7/121 (5%)
Query: 173 PASAVVPQKLVSMI----KCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVA 228
P ++ P +L +M + N R+ IR L + L K + D+ + + + ++A
Sbjct: 647 PTASPAPGRLGAMSAAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLI---MTENEVGKIA 703
Query: 229 ITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMV 288
+ E MF + + Y+ KYRSI+FNL DP+N +VL + L+++ EE+V
Sbjct: 704 LHIEKEMFNLFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELV 763
Query: 289 S 289
S
Sbjct: 764 S 764
>gi|355683932|gb|AER97239.1| death inducer-obliterator 1 [Mustela putorius furo]
Length = 804
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 60/128 (46%), Gaps = 13/128 (10%)
Query: 172 KPASAVVP----------QKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNG 221
KP +A VP ++ + N R+ IR L + L K + D+ + +
Sbjct: 633 KPGTASVPLASQAPGRLGTSNPALSQPNSQIRQNIRRSLKEILWKRVNDSDDLI---MTE 689
Query: 222 CDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIK 281
+ ++A+ E MF + + Y+ +YRSI+FNL DP+N +VL + L++
Sbjct: 690 SEVGKIALHIEKEMFNLFQVTDNRYKSRYRSIMFNLKDPKNQGLFHRVLREEISSAKLVR 749
Query: 282 MSSEEMVS 289
M EE+ S
Sbjct: 750 MKPEELAS 757
>gi|242025624|ref|XP_002433224.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212518765|gb|EEB20486.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 2246
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 227 VAITAESLMFEKWGHSFGT-YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSE 285
++I E +F+ + + T Y+ KYRS++FN+ DP+N +K++ + P+ L+K+S E
Sbjct: 1154 LSIKIEEKLFKHFENKVDTKYKSKYRSLIFNIKDPKNETLYKKIVDNLISPKDLVKLSPE 1213
Query: 286 EMVS 289
E+ S
Sbjct: 1214 ELAS 1217
>gi|367043846|ref|XP_003652303.1| hypothetical protein THITE_2113636 [Thielavia terrestris NRRL 8126]
gi|346999565|gb|AEO65967.1| hypothetical protein THITE_2113636 [Thielavia terrestris NRRL 8126]
Length = 293
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 72/165 (43%), Gaps = 21/165 (12%)
Query: 200 LYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMD 259
LY L+ + E EEV ++ A+ E+ F + + Y K R ++ +L
Sbjct: 143 LYNGLAYRATESIEEV---------LQRAMEVEAAAFAVYKDT-PEYRSKIRGLMTSLKR 192
Query: 260 PENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPI 319
+NP+ R+VL G + PE + M+ +E+ S+ R ++++++E +P +
Sbjct: 193 KDNPELGRRVLGGEITPEKFVVMTDDELASEAQRARDRELERENMLKAQVPMAQKSI--- 249
Query: 320 YHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
S C +C KK + + Q SA +C C W+
Sbjct: 250 --SDSLQCNKCKQKKVS-YSQAQTRSADEPMTTFCECTVCGHRWK 291
>gi|413926158|gb|AFW66090.1| putative SPOC domain / Transcription elongation factor S-II protein
[Zea mays]
Length = 1080
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
Y+ K RS+LFNL D NP+ R +VL G + PE L M++EE+ S
Sbjct: 358 YKEKGRSLLFNLKDKSNPELRERVLSGDIAPERLCSMTAEELAS 401
>gi|302796655|ref|XP_002980089.1| hypothetical protein SELMODRAFT_9085 [Selaginella moellendorffii]
gi|302811590|ref|XP_002987484.1| hypothetical protein SELMODRAFT_9088 [Selaginella moellendorffii]
gi|300144890|gb|EFJ11571.1| hypothetical protein SELMODRAFT_9088 [Selaginella moellendorffii]
gi|300152316|gb|EFJ18959.1| hypothetical protein SELMODRAFT_9085 [Selaginella moellendorffii]
Length = 58
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
Y+ K RS++FNL D NPD R +V +G V PE L M+ E++ S
Sbjct: 2 YKEKARSLVFNLKDKNNPDLRARVFVGEVSPEQLCSMTIEQLAS 45
>gi|115709498|ref|XP_797149.2| PREDICTED: uncharacterized protein LOC592539, partial
[Strongylocentrotus purpuratus]
Length = 403
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%)
Query: 223 DPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKM 282
D RV+ E +++ + + Y+ KYR+++FN+ D +N R +L G + P L++M
Sbjct: 324 DVKRVSKQVEFELYKLFNDTGAKYKAKYRTLIFNIKDMKNKGLFRHILKGEISPRNLVRM 383
Query: 283 SSEEMVS 289
SS+++ S
Sbjct: 384 SSDQLAS 390
>gi|389586162|dbj|GAB68891.1| transcription elongation factor [Plasmodium cynomolgi strain B]
Length = 405
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 8/110 (7%)
Query: 189 NDYFRERIREKLYKALSKVSGEVDEEV----QDKLNGCDPIRVAITAESLMFEKWGHSFG 244
ND R++ ++ L+KA ++G D + + KLN D I F + S
Sbjct: 226 NDVLRDKAKQFLFKAF--ITGSDDNLLYLIDRKKLN--DIIYNIENELHKFFIEKKQSQK 281
Query: 245 TYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRR 294
Y ++ +SI FNL D +NP F K+ ++ P + M+S+EM SD ++
Sbjct: 282 EYNMQLKSIKFNLCDKKNPSFNEKIYAEYIPPRTIATMNSQEMASDEKKK 331
>gi|303311679|ref|XP_003065851.1| Transcription factor S-II , central domain containing protein
[Coccidioides posadasii C735 delta SOWgp]
gi|240105513|gb|EER23706.1| Transcription factor S-II , central domain containing protein
[Coccidioides posadasii C735 delta SOWgp]
Length = 848
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Query: 240 GHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQI 299
G Y + R+ILFN+ +NP R +L+G + P+A KMS+++M S+ R+ + +I
Sbjct: 335 GEPNDPYRQQMRTILFNVR--KNPSLRDSLLVGRITPDAFSKMSTQDMASEELRQRDDEI 392
Query: 300 KKE 302
K+E
Sbjct: 393 KRE 395
>gi|332030327|gb|EGI70070.1| Death-inducer obliterator 1 [Acromyrmex echinatior]
Length = 2282
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Query: 194 ERIREKLYKALSKVSGEVDEEVQD-KLNGCDPIRVAITAESLMFEKWGHSFGTYEVKYRS 252
E IR + K+L+++ +E +D KL + +A E M++ + + Y+ KYRS
Sbjct: 1261 EPIRVNIRKSLTELLSSRIKETKDLKLTDEEIADLAFNIEFEMYKYFKDTGSKYKAKYRS 1320
Query: 253 ILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
++FN+ D +N RK+ + P+A++++S +EM S
Sbjct: 1321 LVFNIKDTKNLTLFRKIADHSLTPDAVVRLSPDEMAS 1357
>gi|320039752|gb|EFW21686.1| hypothetical protein CPSG_01843 [Coccidioides posadasii str.
Silveira]
Length = 848
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Query: 240 GHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQI 299
G Y + R+ILFN+ +NP R +L+G + P+A KMS+++M S+ R+ + +I
Sbjct: 335 GEPNDPYRQQMRTILFNVR--KNPSLRDSLLVGRITPDAFSKMSTQDMASEELRQRDDEI 392
Query: 300 KKE 302
K+E
Sbjct: 393 KRE 395
>gi|189514890|ref|XP_001919157.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein-like [Danio rerio]
Length = 394
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%)
Query: 240 GHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQI 299
G + Y+ RS + NL +P NP R+ ++ G + P+A +MS EEM + RRL +
Sbjct: 257 GRNQHKYKFHIRSKVANLKNPNNPHLRQGLISGQLTPDAFAQMSVEEMAGEKLRRLRETY 316
Query: 300 KKERASDRYLP 310
S+ LP
Sbjct: 317 TSLAISEHQLP 327
>gi|367015614|ref|XP_003682306.1| hypothetical protein TDEL_0F02840 [Torulaspora delbrueckii]
gi|359749968|emb|CCE93095.1| hypothetical protein TDEL_0F02840 [Torulaspora delbrueckii]
Length = 295
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 63/158 (39%), Gaps = 32/158 (20%)
Query: 189 NDYFRERIREKLYKALSKVS----------GEVDEEVQDKLNGCDPIRVAITAESLMFEK 238
N R+ + +Y AL+K S + EE KLN CD
Sbjct: 131 NHKLRDMVIRAMYDALAKDSEHPPKSILQTAKAVEEEMHKLNNCD--------------- 175
Query: 239 WGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQ 298
S Y+ KYR I N++ NPD + K+ G V P L+ +E+ + RR ++
Sbjct: 176 --GSEKAYKDKYRIIYSNIISKNNPDLKHKITSGDVSPFYLVNCDPKELAPEHLRRKLEE 233
Query: 299 IKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTT 336
I K+ L G + R+ CG+C KK +
Sbjct: 234 IAKQN-----LFNAQGATVERSVTDRFTCGKCKEKKVS 266
>gi|119193931|ref|XP_001247569.1| hypothetical protein CIMG_01340 [Coccidioides immitis RS]
gi|392863190|gb|EAS36089.2| PHD finger domain-containing protein [Coccidioides immitis RS]
Length = 849
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Query: 240 GHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQI 299
G Y + R+ILFN+ +NP R +L+G + P+A KMS+++M S+ R+ + +I
Sbjct: 336 GEPNDPYRQQMRTILFNVR--KNPSLRDSLLVGRITPDAFSKMSTQDMASEELRQRDDEI 393
Query: 300 KKE 302
K+E
Sbjct: 394 KRE 396
>gi|395829525|ref|XP_003787906.1| PREDICTED: death-inducer obliterator 1 [Otolemur garnettii]
Length = 2230
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 78/163 (47%), Gaps = 17/163 (10%)
Query: 139 GAPRSKKLVGSEFIVTEETNSLDNVDA--EAIREEKPAS------AVVPQKL----VSMI 186
GA +K+ + VT + L + A AIR KPA+ + VP +L +
Sbjct: 610 GASAAKQAGPTPVPVTAASKKLPSSAALVGAIR--KPAATSVSTASAVPGRLGATSPAPS 667
Query: 187 KCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTY 246
+ N R+ IR L + L K + D+ + + + ++A+ E MF + + Y
Sbjct: 668 QPNSQIRQNIRRSLKEILWKRVNDSDDLI---MTENEVGKIALHIEKEMFNLFQVTDNRY 724
Query: 247 EVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
+ KYRSI+FNL DP+N +VL + L++M EE+VS
Sbjct: 725 KSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVS 767
>gi|119595730|gb|EAW75324.1| death inducer-obliterator 1, isoform CRA_c [Homo sapiens]
Length = 2276
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 7/121 (5%)
Query: 173 PASAVVPQKLVSMI----KCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVA 228
P ++ P +L +M + N R+ IR L + L K + D+ + + + ++A
Sbjct: 683 PMASPAPGRLGAMSAAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLI---MTENEVGKIA 739
Query: 229 ITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMV 288
+ E MF + + Y+ KYRSI+FNL DP+N +VL + L+++ EE+V
Sbjct: 740 LHIEKEMFNLFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELV 799
Query: 289 S 289
S
Sbjct: 800 S 800
>gi|291224586|ref|XP_002732285.1| PREDICTED: PHD finger protein 3-like [Saccoglossus kowalevskii]
Length = 1741
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%)
Query: 226 RVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSE 285
+V E +F+ + + Y+ KYR+++FNL D N R+VL G + P L+ M+SE
Sbjct: 820 KVVNRIEHELFKLYQDTSSKYKAKYRTLMFNLKDVNNKGLFRRVLKGDISPSKLVGMTSE 879
Query: 286 EMV 288
+M
Sbjct: 880 QMA 882
>gi|44971714|gb|AAS49899.1| death inducer-obliterator-3 [Homo sapiens]
Length = 2240
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 7/121 (5%)
Query: 173 PASAVVPQKLVSMI----KCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVA 228
P ++ P +L +M + N R+ IR L + L K + D+ + + + ++A
Sbjct: 647 PMASPAPGRLGAMSAAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLI---MTENEVGKIA 703
Query: 229 ITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMV 288
+ E MF + + Y+ KYRSI+FNL DP+N +VL + L+++ EE+V
Sbjct: 704 LHIEKEMFNLFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELV 763
Query: 289 S 289
S
Sbjct: 764 S 764
>gi|301129165|ref|NP_149072.2| death-inducer obliterator 1 isoform c [Homo sapiens]
gi|301129170|ref|NP_001180298.1| death-inducer obliterator 1 isoform c [Homo sapiens]
gi|116241332|sp|Q9BTC0.5|DIDO1_HUMAN RecName: Full=Death-inducer obliterator 1; Short=DIO-1;
Short=hDido1; AltName: Full=Death-associated
transcription factor 1; Short=DATF-1
Length = 2240
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 7/121 (5%)
Query: 173 PASAVVPQKLVSMI----KCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVA 228
P ++ P +L +M + N R+ IR L + L K + D+ + + + ++A
Sbjct: 647 PMASPAPGRLGAMSAAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLI---MTENEVGKIA 703
Query: 229 ITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMV 288
+ E MF + + Y+ KYRSI+FNL DP+N +VL + L+++ EE+V
Sbjct: 704 LHIEKEMFNLFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELV 763
Query: 289 S 289
S
Sbjct: 764 S 764
>gi|410901489|ref|XP_003964228.1| PREDICTED: PHD finger protein 3-like [Takifugu rubripes]
Length = 1448
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 36/63 (57%)
Query: 227 VAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEE 286
VA E +F + Y+ KYRS++FNL D +N +KVL G + P LI+MS EE
Sbjct: 687 VAKKIERELFHLNKDTDNKYKNKYRSLMFNLKDTKNNVLYKKVLKGEISPGNLIRMSPEE 746
Query: 287 MVS 289
+ S
Sbjct: 747 LAS 749
>gi|307203942|gb|EFN82849.1| Death-inducer obliterator 1 [Harpegnathos saltator]
Length = 2352
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 68/126 (53%), Gaps = 5/126 (3%)
Query: 168 IREEKPASAVVPQKLVSMIKCNDYFR---ERIREKLYKALSKVSGEVDEEVQD-KLNGCD 223
I++++PA ++ P + K R E IR + K+L+++ +E +D KL +
Sbjct: 1285 IKKQEPAKSL-PSQSKQQTKLTPVKRPETEPIRLNIRKSLTELLSSRIKETEDLKLTDEE 1343
Query: 224 PIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMS 283
+A E M++ + + Y+ KYRS++FN+ D +N RK+ + P+A++++S
Sbjct: 1344 IADLAFNIELEMYKYFKDTGAKYKAKYRSLVFNIKDTKNLTLFRKIADRSLTPDAVVRLS 1403
Query: 284 SEEMVS 289
+EM S
Sbjct: 1404 PDEMAS 1409
>gi|333361278|pdb|3NDQ|A Chain A, Structure Of Human Tfiis Domain Ii
Length = 108
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 41/70 (58%)
Query: 221 GCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALI 280
G D + E ++++ ++ Y+ + RS + NL D +NP+ R+ VL G++ P+
Sbjct: 38 GADEEELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFA 97
Query: 281 KMSSEEMVSD 290
+M++EEM SD
Sbjct: 98 RMTAEEMASD 107
>gi|354481959|ref|XP_003503168.1| PREDICTED: death-inducer obliterator 1 [Cricetulus griseus]
Length = 2263
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 3/101 (2%)
Query: 189 NDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEV 248
N R+ IR L + L K + D+ + + + ++A+ E MF + + Y+
Sbjct: 667 NSQIRQNIRRSLKEILWKRVNDSDDLI---MTENEVGKIALHIEKEMFNLFQVTDNRYKS 723
Query: 249 KYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
KYRSI+FNL DP+N +VL + L++M EE+VS
Sbjct: 724 KYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVS 764
>gi|402469030|gb|EJW04098.1| transcription elongation factor S-II [Edhazardia aedis USNM 41457]
Length = 305
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 79/189 (41%), Gaps = 29/189 (15%)
Query: 179 PQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEK 238
P ++ K N + +++ Y ++ + CD + AI A+ ++ E
Sbjct: 137 PAAIIQKYKINQAYPDKVLTIFYDVF-----------KNHIKECDFEQAAIVAKKIVDE- 184
Query: 239 WGHSFGTYEVKYRSIL----FNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRR 294
T ++K R ++ NL + NP+ + V G + PE I M+ EEM S+ ++
Sbjct: 185 ---LVRTDKIKDRELVASKKLNLSNKANPELCQNVYNGTISPERYIAMTIEEMKSEDLKK 241
Query: 295 LNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSS----AKRIK 350
+++K+++ D LP +T + C RC KTT + S+ I
Sbjct: 242 REEKMKQDQLMDSQLPKLQA------DTTMFKCSRCKQSKTTYYQLQTRSADEPMTNYIT 295
Query: 351 CLNCYQYWE 359
C C W+
Sbjct: 296 CCVCGHKWK 304
>gi|297808571|ref|XP_002872169.1| hypothetical protein ARALYDRAFT_489410 [Arabidopsis lyrata subsp.
lyrata]
gi|297318006|gb|EFH48428.1| hypothetical protein ARALYDRAFT_489410 [Arabidopsis lyrata subsp.
lyrata]
Length = 1027
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%)
Query: 223 DPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKM 282
DP +A E +F+ + Y+ K RS+LFNL D NP+ R V+ G + PE L M
Sbjct: 353 DPELLASKIELELFKLFRGVNKKYKEKGRSLLFNLKDKNNPELRESVMSGKISPERLCNM 412
Query: 283 SSEEMVS 289
++EE+ S
Sbjct: 413 TAEELAS 419
>gi|115400495|ref|XP_001215836.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114191502|gb|EAU33202.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 885
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 72/153 (47%), Gaps = 15/153 (9%)
Query: 163 VDAEAIREEKPASAVVPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDK--LN 220
V E I P VV Q + + R + ALS++ E E Q + N
Sbjct: 265 VKQEVIDHASPPGVVVEQAATGGVTSIEEISNPARSRAATALSRLFVEQITEAQKRGPFN 324
Query: 221 GCDP-------IRVAITAESLMFEK----WGHSFGTYEVKYRSILFNLMDPENPDFRRKV 269
D ++A+ E M++ G Y+++ R+ILFN+ +N R ++
Sbjct: 325 LPDGKTKEEVGQQIALAIEYAMYQNICGGAGEPTEAYKLQLRTILFNVK--KNTSLRDRL 382
Query: 270 LLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKE 302
L+G + P++L KMSS++M S+ ++ + +IK+E
Sbjct: 383 LVGSLSPDSLSKMSSQDMASEELQQKDAEIKRE 415
>gi|348541331|ref|XP_003458140.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein-like [Oreochromis niloticus]
Length = 323
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 58/142 (40%), Gaps = 19/142 (13%)
Query: 232 ESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDG 291
E + E H+ Y+ RS + NL +P++ + +L G + PEA +MS+E+M S
Sbjct: 178 ERHVHELHNHNQVKYKACVRSKVANLRNPKSGHLHQGLLSGSLSPEAFARMSAEDMASAE 237
Query: 292 SRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKT---------------T 336
R+L ++ + S+R LP G G + + C RCG
Sbjct: 238 LRQLREEYSSQGVSERQLPQ--GIEG--TRTEKIRCKRCGGSDCRVTQVSRGVLFLPAWV 293
Query: 337 NHGNDQNSSAKRIKCLNCYQYW 358
G + + C C Q W
Sbjct: 294 RQGGPDEDAMTFVTCSGCGQQW 315
>gi|452821015|gb|EME28050.1| hypothetical protein Gasu_43890 [Galdieria sulphuraria]
Length = 707
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 70/135 (51%), Gaps = 6/135 (4%)
Query: 159 SLDNVDAEAIREEKPASAVVPQKLVSMIKCNDYFRER----IREKLYKALSKVSGEVDEE 214
S + V E +E K + + K+ + + + + +ER IREK L+++ E E+
Sbjct: 144 SQEKVFNERNKETKEQANIKTTKVGTSPRKDSFMQERVAENIREKAKNVLNQILLENLED 203
Query: 215 VQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHV 274
++ + ++AI E+ +FEK+ + Y + RS+ FNL N D +R +++ +
Sbjct: 204 TGVDIDKTNISKIAIDIENALFEKYFKA--DYLEQLRSLTFNLRGKRNLDLKRAIVMSDI 261
Query: 275 KPEALIKMSSEEMVS 289
P L +M+++E+ S
Sbjct: 262 SPTRLAEMTADELAS 276
>gi|348507274|ref|XP_003441181.1| PREDICTED: hypothetical protein LOC100699272 [Oreochromis
niloticus]
Length = 1691
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 56/116 (48%), Gaps = 8/116 (6%)
Query: 174 ASAVVPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAES 233
A ++ +K VS+ R+ ++E L + L + E +L A E
Sbjct: 678 APSLASKKPVSLEAIRRSVRDSLKEILIQRLKDSDLNISVERASEL--------AKKIER 729
Query: 234 LMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
+F + + Y+ KYRS++FNL D +N ++VL G + P LI+MS EE+ S
Sbjct: 730 ELFHLYKDTDNKYKNKYRSLMFNLKDTKNNILCKRVLKGEISPANLIRMSPEELAS 785
>gi|82915268|ref|XP_729034.1| transcription elongation factor TFIIS.h [Plasmodium yoelii yoelii
17XNL]
gi|23485845|gb|EAA20599.1| transcription elongation factor TFIIS.h, putative [Plasmodium
yoelii yoelii]
Length = 366
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 55/104 (52%), Gaps = 6/104 (5%)
Query: 190 DYFRERIREKLYKALSKVSGEVDE--EVQDKLNGCDPIRVAITAESL-MFEKWGHSFGTY 246
D R++ ++ L+KA ++G D + D+ N D I I E +F + +S Y
Sbjct: 191 DVLRDKAKQFLFKAF--IAGSHDNLLHIIDQ-NKLDNIIYNIENELFKIFIERKNSQKEY 247
Query: 247 EVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSD 290
++ +SI FNL D +NP+F K+ ++ L M+S++M SD
Sbjct: 248 NMQLKSIKFNLSDKKNPNFNEKIYAEYISARTLATMNSQDMASD 291
>gi|401625778|gb|EJS43771.1| dst1p [Saccharomyces arboricola H-6]
Length = 309
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 90/216 (41%), Gaps = 53/216 (24%)
Query: 132 VRRVDQKGAPRSKKLVGSEFIVTEETNSL-DNVDAEAIREEKPASAVVPQKLVSMIKCND 190
V + Q +P+S +++ T+ NS D VD +A+ KL
Sbjct: 107 VNSLGQHSSPQSDATKQDKYVSTKPRNSKNDGVD----------TAIYHHKL-------- 148
Query: 191 YFRERIREKLYKALSKVS----------GEVDEEVQDKLNGCDPIRVAITAESLMFEKWG 240
R+++ + LY L+K S + E+ +K+N CD ++E+L
Sbjct: 149 --RDQVLKALYDVLAKDSEHPPQSILHTAKAIEDEMNKINNCD------SSEAL------ 194
Query: 241 HSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIK 300
Y+ +YR I N++ NPD + K+ G + PE L ++++ L Q+I
Sbjct: 195 -----YKARYRIIYSNIISKNNPDLKHKIANGDITPEFLATCDAKDL---APAPLKQKI- 245
Query: 301 KERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTT 336
E S + L G + R+ CG+C KK +
Sbjct: 246 -EEISKQNLYNAQGATIERSVTDRFTCGKCKEKKVS 280
>gi|213404362|ref|XP_002172953.1| transcription elongation regulator [Schizosaccharomyces japonicus
yFS275]
gi|212001000|gb|EEB06660.1| transcription elongation regulator [Schizosaccharomyces japonicus
yFS275]
Length = 698
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
Query: 219 LNGCDPIRVAITAESLMFEKWGHSFG-------TYEVKYRSILFNLMDPENPDFRRKVLL 271
L D + A+ E MF + + Y K+R+I FNL D NP R +
Sbjct: 199 LKFPDLVEFALQLERTMFIELSYKIDGNAIPNKAYRDKFRNIKFNLTDDRNPHLRASLFK 258
Query: 272 GHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYL 309
G + P L+ M+SEEM + + +QI+++ + L
Sbjct: 259 GEITPVQLVHMTSEEMANPDLKVFAEQIRQQSTENTIL 296
>gi|125597753|gb|EAZ37533.1| hypothetical protein OsJ_21863 [Oryza sativa Japonica Group]
Length = 1136
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%)
Query: 227 VAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEE 286
+A E +F G Y+ K RS+LFNL D NP R +VL G + P+ L M++EE
Sbjct: 323 LAFEIEGELFTLLGGVNKKYKEKGRSLLFNLKDKSNPVLRGRVLSGDITPKRLCSMTTEE 382
Query: 287 MVS 289
+ S
Sbjct: 383 LAS 385
>gi|345308426|ref|XP_001506090.2| PREDICTED: death-inducer obliterator 1 [Ornithorhynchus anatinus]
Length = 2670
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 59/120 (49%), Gaps = 6/120 (5%)
Query: 173 PASAVVPQKL---VSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAI 229
P S+ V K S + N R+ IR L + L K + D+ + + + ++A+
Sbjct: 896 PTSSSVAAKFGANPSQSQPNSQIRQNIRRSLKEILWKRVNDSDDLI---MTENEVGKIAL 952
Query: 230 TAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
E +F + + Y+ KYRSI+FNL DP+N +VL + L++M EE++S
Sbjct: 953 HIEKELFNLFHVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEIPLSKLVRMKPEELLS 1012
>gi|431894600|gb|ELK04400.1| Death-inducer obliterator 1 [Pteropus alecto]
Length = 1849
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 3/101 (2%)
Query: 189 NDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEV 248
N R+ IR L + L K + D+ + + + RVA+ E +F + + Y+
Sbjct: 632 NSQIRQNIRRSLKEILWKRVSDSDDLI---MTESEVGRVALRIEKELFNLFRVTDNRYKS 688
Query: 249 KYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
KYRS++FNL DP+N +VL + L++M EE+VS
Sbjct: 689 KYRSLMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVS 729
>gi|432866827|ref|XP_004070955.1| PREDICTED: PHD finger protein 3-like [Oryzias latipes]
Length = 1340
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 36/56 (64%)
Query: 232 ESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEM 287
E+ MF+ + ++ Y KYR+I+FNL DP+N +V+ G + P L++MS ++M
Sbjct: 584 ETEMFDIFRNTDSKYMNKYRTIMFNLKDPKNKGLLYRVVHGEIGPFRLVRMSQKDM 639
>gi|195453902|ref|XP_002073994.1| GK14401 [Drosophila willistoni]
gi|194170079|gb|EDW84980.1| GK14401 [Drosophila willistoni]
Length = 2012
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 63/126 (50%), Gaps = 5/126 (3%)
Query: 169 REEKPASAVVPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDK----LNGCDP 224
+E+ P ++ V + + ++ R +R L + L E E +DK L +
Sbjct: 1262 KEKAPVASRVASPVRAGSTKSEPIRVNVRRTLKEQLLARIKEAQEANKDKAIKWLTSLEV 1321
Query: 225 IRVAITAESLMFEKWGHSFGT-YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMS 283
+ A + ES M+ +G G Y+ KYRS++FN+ D +N K+ V+P+ L++M+
Sbjct: 1322 EQFAKSVESEMYHSFGRDAGAKYKSKYRSLMFNIKDRKNKTLFEKICAKQVEPKQLVRMT 1381
Query: 284 SEEMVS 289
E++ S
Sbjct: 1382 PEQLAS 1387
>gi|115468770|ref|NP_001057984.1| Os06g0595900 [Oryza sativa Japonica Group]
gi|113596024|dbj|BAF19898.1| Os06g0595900, partial [Oryza sativa Japonica Group]
Length = 630
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%)
Query: 227 VAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEE 286
+A E +F G Y+ K RS+LFNL D NP R +VL G + P+ L M++EE
Sbjct: 80 LAFEIEGELFTLLGGVNKKYKEKGRSLLFNLKDKSNPVLRGRVLSGDITPKRLCSMTTEE 139
Query: 287 MVS 289
+ S
Sbjct: 140 LAS 142
>gi|50286491|ref|XP_445674.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524979|emb|CAG58585.1| unnamed protein product [Candida glabrata]
Length = 306
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 69/150 (46%), Gaps = 16/150 (10%)
Query: 189 NDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGT--Y 246
N+ R+++ LY AL+K S + + ++ +I E M + S Y
Sbjct: 142 NNKLRDQVIRALYDALAKDSEHPPKSI---------LQTSIAIEEEMHKLNDSSIKEKEY 192
Query: 247 EVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASD 306
+ KYR I N++ NPD + K+ G + PE L+ +++ + ++ ++IKK+
Sbjct: 193 KDKYRVIYSNIISRNNPDLKVKIANGDLSPEQLVNSDPKDLAPEHLKKKMEEIKKQ---- 248
Query: 307 RYLPWKGGYLGPIYHSTRYMCGRCGHKKTT 336
+G + + R+ CG+C KK +
Sbjct: 249 NLFNAQGATIERSV-TDRFTCGKCKEKKVS 277
>gi|307187162|gb|EFN72405.1| Death-inducer obliterator 1 [Camponotus floridanus]
Length = 2322
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Query: 194 ERIREKLYKALSKVSGEVDEEVQD-KLNGCDPIRVAITAESLMFEKWGHSFGTYEVKYRS 252
E IR + K L+++ +E +D KL + +A E M++ + + Y+ KYRS
Sbjct: 1303 EPIRLNIRKTLTELLSSRIKETEDLKLTDEEIADLAFNIELEMYKYFKDTGSKYKAKYRS 1362
Query: 253 ILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
++FN+ D +N RK+ + P+A++++S +EM S
Sbjct: 1363 LVFNIKDTKNLTLFRKIADRSLTPDAVVRLSPDEMAS 1399
>gi|383422683|gb|AFH34555.1| SPOC domain-containing protein 1 [Macaca mulatta]
Length = 1199
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%)
Query: 227 VAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEE 286
+A E+ +++ + G Y+ KYRS+LFNL DP N D KV+ G V L++MSS +
Sbjct: 636 IAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTHYDLVRMSSMQ 695
Query: 287 MV 288
+
Sbjct: 696 LA 697
>gi|355557769|gb|EHH14549.1| hypothetical protein EGK_00493 [Macaca mulatta]
Length = 1212
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%)
Query: 227 VAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEE 286
+A E+ +++ + G Y+ KYRS+LFNL DP N D KV+ G V L++MSS +
Sbjct: 636 IAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTHYDLVRMSSMQ 695
Query: 287 MV 288
+
Sbjct: 696 LA 697
>gi|47229319|emb|CAG04071.1| unnamed protein product [Tetraodon nigroviridis]
Length = 3036
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Query: 189 NDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEV 248
N+ R+ I++ L L K G+ ++ K + + +++ + E MF + ++ Y
Sbjct: 2109 NNQIRQSIQKSLVSILVKRVGDCEDL---KTSESEVVKLVASIEVEMFNIFRNTDSKYMN 2165
Query: 249 KYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEM 287
KYR+I+FNL DP N + G + P L++M+ ++M
Sbjct: 2166 KYRTIMFNLKDPRNKGLLYGFVRGEISPFRLVRMTQKDM 2204
>gi|390339426|ref|XP_780718.3| PREDICTED: uncharacterized protein LOC575208 [Strongylocentrotus
purpuratus]
Length = 2433
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 39/64 (60%)
Query: 226 RVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSE 285
RV+ E +++ + + Y+ KYR+++FN+ D +N R +L G + P L++MSS+
Sbjct: 1298 RVSKQVEFELYKLFNDTGAKYKAKYRTLIFNIKDMKNKGLFRHILKGEISPRNLVRMSSD 1357
Query: 286 EMVS 289
++ S
Sbjct: 1358 QLAS 1361
>gi|19114535|ref|NP_593623.1| transcription elongation factor TFIIS [Schizosaccharomyces pombe
972h-]
gi|1351227|sp|P49373.1|TFS2_SCHPO RecName: Full=Transcription elongation factor S-II; AltName:
Full=TFIIS
gi|924620|gb|AAA74048.1| transcription elongation factor TFIIS [Schizosaccharomyces pombe]
gi|12038919|emb|CAC19733.1| transcription elongation factor TFIIS [Schizosaccharomyces pombe]
Length = 293
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 55/124 (44%), Gaps = 9/124 (7%)
Query: 240 GHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQI 299
G + Y + RS+ NL D NP R VL + P+ L M+S E+ S+ R+ + ++
Sbjct: 173 GKTGSEYRNRMRSLYMNLKDKNNPKLRASVLRNEITPQRLSTMTSAELASEDRRKEDAKL 232
Query: 300 KKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKRI----KCLNCY 355
++E L G + + CG+C KK + + S+ + + +C C
Sbjct: 233 EQEN-----LFHAQGAKPQKAVTDLFTCGKCKQKKVSYYQMQTRSADEPMTTFCECTVCG 287
Query: 356 QYWE 359
W+
Sbjct: 288 NRWK 291
>gi|402853722|ref|XP_003891539.1| PREDICTED: LOW QUALITY PROTEIN: SPOC domain-containing protein 1
[Papio anubis]
Length = 1199
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%)
Query: 227 VAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEE 286
+A E+ +++ + G Y+ KYRS+LFNL DP N D KV+ G V L++MSS +
Sbjct: 636 IAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTHYDLVRMSSMQ 695
Query: 287 MV 288
+
Sbjct: 696 LA 697
>gi|355745090|gb|EHH49715.1| hypothetical protein EGM_00425 [Macaca fascicularis]
Length = 1212
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%)
Query: 227 VAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEE 286
+A E+ +++ + G Y+ KYRS+LFNL DP N D KV+ G V L++MSS +
Sbjct: 636 IAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTHYDLVRMSSMQ 695
Query: 287 MV 288
+
Sbjct: 696 LA 697
>gi|323450413|gb|EGB06294.1| hypothetical protein AURANDRAFT_29341 [Aureococcus anophagefferens]
Length = 275
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 50/117 (42%), Gaps = 9/117 (7%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
Y K R + FNL +NPD R +V G V P L MS +E+ + + +++ + +
Sbjct: 162 YVAKLRQLSFNL--KKNPDLRARVAGGGVTPAELCSMSVDELATQEVQAERKKMAEFQHD 219
Query: 306 DRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSS----AKRIKCLNCYQYW 358
R L W T Y CG+C K +N+ S + +C +C W
Sbjct: 220 ARSLDWDKKNRD---RKTMYPCGKCKSTKVSNYEKQTRSGDEPMTQFFECADCGNRW 273
>gi|255713242|ref|XP_002552903.1| KLTH0D04136p [Lachancea thermotolerans]
gi|238934283|emb|CAR22465.1| KLTH0D04136p [Lachancea thermotolerans CBS 6340]
Length = 293
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
Y+ KYR + N++ NPD + ++ G V PE L+ +E+ + ++ N++I A
Sbjct: 179 YKDKYRVVYANVISKNNPDLKHRITGGDVSPEYLVNCDPKELAPEHLKKKNEEI----AR 234
Query: 306 DRYLPWKGGYLGPIYHSTRYMCGRCGHKKTT 336
+G L + R+ CG+C KK +
Sbjct: 235 QNLFNAQGATLERSV-TDRFTCGKCKEKKVS 264
>gi|325182938|emb|CCA17393.1| conserved hypothetical protein [Albugo laibachii Nc14]
gi|325189886|emb|CCA24366.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 277
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 9/141 (6%)
Query: 226 RVAITAESLMFEKWGHSFG---TYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKM 282
++A+ E+ +FE + F Y K R +LFNL D N R +++ G + AL++M
Sbjct: 138 QIAMEVENQLFELYKECFTLPKAYGQKARQLLFNLRDSRNDLLRDRLMSGELSAAALVRM 197
Query: 283 SSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQ 342
S+ EM + + +Q K+R + + L + S + C CG +T +
Sbjct: 198 SANEMANPQLVKQRKQWIKKRTYE--VMRNAPDLESLTESDMFECRSCGCSRTRYRQWRR 255
Query: 343 NSSAKR----IKCLNCYQYWE 359
+ R I C C WE
Sbjct: 256 KAIVDRTRIIIICTQCPYRWE 276
>gi|367006041|ref|XP_003687752.1| hypothetical protein TPHA_0K01860 [Tetrapisispora phaffii CBS 4417]
gi|357526057|emb|CCE65318.1| hypothetical protein TPHA_0K01860 [Tetrapisispora phaffii CBS 4417]
Length = 303
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 68/150 (45%), Gaps = 16/150 (10%)
Query: 189 NDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAI--TAESLMFEKWGHSFGTY 246
ND R+R+ + LY AL+K E + Q LN I + + S EK Y
Sbjct: 139 NDDLRDRVIKALYDALAK---ESEHPPQAILNTVKDIELQMHNLHNSETDEK------AY 189
Query: 247 EVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASD 306
+YR I N++ NPD + K+ G V E L K SS+++ + ++ +I K+
Sbjct: 190 RERYRIIYSNVISKNNPDLKHKITNGEVTAEFLSKCSSKDLAPEYLKQKMDEISKQ---- 245
Query: 307 RYLPWKGGYLGPIYHSTRYMCGRCGHKKTT 336
+G + + R+ CG+C KK +
Sbjct: 246 NLFNAQGATIERSV-TDRFTCGKCKEKKVS 274
>gi|440635961|gb|ELR05880.1| transcription elongation factor S-II [Geomyces destructans
20631-21]
Length = 301
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 59/137 (43%), Gaps = 11/137 (8%)
Query: 228 AITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEM 287
A+ E F K+ Y K RS+ NL + +N + +VL G + + + M+ +E+
Sbjct: 169 AMEVEKAAFTKYKGDTPEYRAKMRSLFQNLKNKQNKELGPRVLSGEIPADKFVIMTHDEL 228
Query: 288 VSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAK 347
S ++ + +++K+ +P + S CGRCG KK + + Q SA
Sbjct: 229 KSAERKKEDDELQKDNMKRAQVP-----MAERSISDALKCGRCGQKKVS-YSQAQTRSAD 282
Query: 348 R-----IKCLNCYQYWE 359
+C C W+
Sbjct: 283 EPMTTFCECTVCGNRWK 299
>gi|350296969|gb|EGZ77946.1| transcription elongation factor [Neurospora tetrasperma FGSC 2509]
Length = 298
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 20/165 (12%)
Query: 200 LYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMD 259
LY L+ E EEV ++ AI E+ +F+ Y K R++ +L
Sbjct: 147 LYNGLAYRRTESIEEV---------VKRAIEVENALFKACKGENQEYRSKGRTLFTSLKR 197
Query: 260 PENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPI 319
+N R+V+ G + E L+ +S +E+ S+ R +++++KE +P +
Sbjct: 198 KDNAALGRRVMSGELPVERLVVLSDKELASEEQRARDEELEKENMKKAQVP-----MAEK 252
Query: 320 YHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
S CG+CG +K + + Q SA +C C W+
Sbjct: 253 SISDALKCGKCGQRKVS-YSQAQTRSADEPMTTFCECTVCGNRWK 296
>gi|403220912|dbj|BAM39045.1| transcription elongation factor [Theileria orientalis strain
Shintoku]
Length = 319
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 51/119 (42%), Gaps = 7/119 (5%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
Y ++ + I FN D +N F KV G + L+ MSS +M SD + I ++
Sbjct: 200 YNLQLKCISFNFKDIKNTFFNYKVYSGAIPVSELVTMSSLQMASDEKKMQRSVILEQSLE 259
Query: 306 DRYLPW--KGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSS----AKRIKCLNCYQYW 358
W K +L ++ CG+C ++TT + SS + CLNC W
Sbjct: 260 ACQSDWAIKNIFLNQ-KSKGQFKCGKCNSRQTTYYQLQTRSSDEPMTTFVTCLNCKNRW 317
>gi|124511836|ref|XP_001349051.1| transcription elongation factor s-II, putative [Plasmodium
falciparum 3D7]
gi|23498819|emb|CAD50896.1| transcription elongation factor s-II, putative [Plasmodium
falciparum 3D7]
Length = 403
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 75/185 (40%), Gaps = 25/185 (13%)
Query: 189 NDYFRERIREKLYKALSKVSGEVDEEV----QDKLNG------CDPIRVAITAESLMFEK 238
ND R++ ++ L+KA V G D + + KLN C+ +V + S
Sbjct: 227 NDMHRDKAKQFLFKAF--VVGSSDNLLYFIEKKKLNDIIYNIECELYKVYMEKRS----- 279
Query: 239 WGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQ 298
S Y ++ +SI FNL D +NP+F KV + +AL M+S++M SD + ++
Sbjct: 280 ---SQKEYNMQLKSIKFNLSDKKNPNFNEKVYSEFISSKALATMNSQDMASDEKKNERKK 336
Query: 299 IKKERASDRYLPWK-GGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSS----AKRIKCLN 353
+E W L + C +C T H SS + CL
Sbjct: 337 CLQESLLACQSDWDVKNILLKKSRKGEFQCFKCKGYDTIYHQLQTRSSDEPMTTFVTCLK 396
Query: 354 CYQYW 358
C W
Sbjct: 397 CNNRW 401
>gi|68072123|ref|XP_677975.1| transcription elongation factor [Plasmodium berghei strain ANKA]
gi|56498287|emb|CAH96309.1| transcription elongation factor s-ii, putative [Plasmodium berghei]
Length = 365
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 8/108 (7%)
Query: 187 KCNDYFRERIREKLYKALSKVSGEVDEEVQ--DKLNGCDPIRVAITAE--SLMFEKWGHS 242
K +D R++ ++ L+KA ++G D + D+ N D I I E + EK +S
Sbjct: 187 KYHDALRDKAKQFLFKAF--ITGSHDNLLHLIDR-NKLDNIIYNIENELYKIFIEK-KNS 242
Query: 243 FGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSD 290
Y ++ +SI FNL D +NP+F K+ ++ L M+S++M SD
Sbjct: 243 QKEYNMQLKSIKFNLSDKKNPNFNEKIYAEYISARTLATMNSQDMASD 290
>gi|302309342|ref|NP_986676.2| AGR011Wp [Ashbya gossypii ATCC 10895]
gi|299788313|gb|AAS54500.2| AGR011Wp [Ashbya gossypii ATCC 10895]
gi|374109927|gb|AEY98832.1| FAGR011Wp [Ashbya gossypii FDAG1]
Length = 304
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 67/149 (44%), Gaps = 16/149 (10%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFE--KWGHSFGTYE 247
D R+ + Y AL+K S + + + +AI E M++ G + Y+
Sbjct: 141 DKLRDMVIRAFYDALAKESEHPPQSI---------LAIAIDIEKHMWQLNDPGENEKAYK 191
Query: 248 VKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDR 307
KYR I N++ N D + K+ G + PE L+ +E+ + R+ ++I K+ +
Sbjct: 192 DKYRVIYSNVISKNNRDLKHKITNGDITPEYLVNCDPKELAPEHLRKKLEEIAKQNLFNA 251
Query: 308 YLPWKGGYLGPIYHSTRYMCGRCGHKKTT 336
+G L + R+ CG+C KK +
Sbjct: 252 ----QGATLERSV-TDRFQCGKCKEKKVS 275
>gi|432859850|ref|XP_004069267.1| PREDICTED: death-inducer obliterator 1-like [Oryzias latipes]
Length = 2342
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 52/102 (50%), Gaps = 5/102 (4%)
Query: 189 NDYFRERIREKLYKALSK-VSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYE 247
N R+ IR L L K VS D ++ + G R+A E MF + Y+
Sbjct: 654 NTQMRQNIRRSLTDILFKRVSDSDDLKMTENEVG----RLAFAIEKEMFNLCLSTDSKYK 709
Query: 248 VKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
KYR+++ +L DP+N KV+ G V P L+++ +EE+VS
Sbjct: 710 NKYRTLMLHLKDPKNKGLFYKVMGGDVTPFRLVRLGAEELVS 751
>gi|426241849|ref|XP_004023383.1| PREDICTED: LOW QUALITY PROTEIN: death-inducer obliterator 1-like
[Ovis aries]
Length = 1927
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 3/101 (2%)
Query: 189 NDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEV 248
N R+ IR L + L K + D+ + + + ++A+ E MF + + Y+
Sbjct: 617 NSQIRQNIRRSLKEILWKRVNDSDDLI---MTENEVGKIALLIEKEMFNLFRVTDNRYKS 673
Query: 249 KYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
KYRS++FNL DP+N +VL + L++M EE+VS
Sbjct: 674 KYRSLMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVS 714
>gi|19074096|ref|NP_584702.1| TRANSCRIPTION ELONGATION FACTOR SII [Encephalitozoon cuniculi
GB-M1]
gi|19068738|emb|CAD25206.1| TRANSCRIPTION ELONGATION FACTOR SII [Encephalitozoon cuniculi
GB-M1]
gi|449329004|gb|AGE95279.1| transcription elongation factor sII [Encephalitozoon cuniculi]
Length = 257
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 57/126 (45%), Gaps = 10/126 (7%)
Query: 213 EEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLG 272
+ ++ ++ C+ A+ A + E +G + RS NL D NP R+V G
Sbjct: 112 DAIKTNISDCNNASAALLARQITIEIFGRNPSDIAKLIRSKCLNLKDKNNPALCRRVYNG 171
Query: 273 HVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS--DRYLPWKGGYLGPIYHSTRYMCGRC 330
+ P + MSSEEM S+ + N+++K S + +P + + + C +C
Sbjct: 172 DISPSRYVDMSSEEMKSESLK--NEEVKMIEVSLYECQIPTQKA------ETDIFKCSKC 223
Query: 331 GHKKTT 336
G +K +
Sbjct: 224 GERKCS 229
>gi|194742650|ref|XP_001953814.1| GF17954 [Drosophila ananassae]
gi|190626851|gb|EDV42375.1| GF17954 [Drosophila ananassae]
Length = 1976
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 232 ESLMFEKWGHSFGT-YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
ES M+ +G G Y+ KYRS++FN+ D +N K+ V+P+ L++M++E++ S
Sbjct: 1301 ESEMYHSFGRDVGAKYKAKYRSLMFNIKDRKNRTLFEKICAKQVEPKQLVRMTAEQLAS 1359
>gi|85119699|ref|XP_965694.1| hypothetical protein NCU02563 [Neurospora crassa OR74A]
gi|28927506|gb|EAA36458.1| conserved hypothetical protein [Neurospora crassa OR74A]
gi|38567143|emb|CAE76438.1| related to transcription elongation factor TFIIS [Neurospora
crassa]
gi|336464865|gb|EGO53105.1| hypothetical protein NEUTE1DRAFT_73389 [Neurospora tetrasperma FGSC
2508]
Length = 298
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 20/165 (12%)
Query: 200 LYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMD 259
LY L+ E EEV ++ A+ E+ +F+ Y K R++ +L
Sbjct: 147 LYNGLAYRRTESIEEV---------VKRAVEVENALFKACKGENQEYRSKGRTLFTSLKR 197
Query: 260 PENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPI 319
+N R+V+ G + E L+ +S +E+ S+ R +++++KE +P +
Sbjct: 198 KDNAALGRRVMSGELPVERLVVLSDKELASEEQRARDEELEKENMKKAQVP-----MAEK 252
Query: 320 YHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
S CG+CG +K + + Q SA +C C W+
Sbjct: 253 SISDALKCGKCGQRKVS-YSQAQTRSADEPMTTFCECTVCGNRWK 296
>gi|440907449|gb|ELR57597.1| Death-inducer obliterator 1 [Bos grunniens mutus]
Length = 2175
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 61/125 (48%), Gaps = 15/125 (12%)
Query: 173 PASAVVPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPI------- 225
P ++ P +L + + +IR+ + ++L ++ + ++N D +
Sbjct: 649 PLASPAPGRLGPVSPASSQPNSQIRQNIRRSLKEI-------LWKRVNDSDDLIMTENEV 701
Query: 226 -RVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSS 284
++A+ E MF + + Y+ KYRS++FNL DP+N +VL + L++M
Sbjct: 702 GKIALLIEKEMFNLFRVTDNRYKSKYRSLMFNLKDPKNQGLFHRVLREEISLAKLVRMKP 761
Query: 285 EEMVS 289
EE+VS
Sbjct: 762 EELVS 766
>gi|297807181|ref|XP_002871474.1| hypothetical protein ARALYDRAFT_350338 [Arabidopsis lyrata subsp.
lyrata]
gi|297317311|gb|EFH47733.1| hypothetical protein ARALYDRAFT_350338 [Arabidopsis lyrata subsp.
lyrata]
Length = 819
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 65/148 (43%), Gaps = 18/148 (12%)
Query: 148 GSEFIVTEETNSLDNVDAEAIREEKPASAVVPQKLVSMIKCNDYFRERIREKLYKAL-SK 206
G E I T ET + + ++ + PAS VP E I ++ + S
Sbjct: 131 GKENIGTVETPVITQENTQSFQPVSPASITVP------------IGEGIMSEMPTGVESS 178
Query: 207 VSGEVDEEVQDKLNGC-----DPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPE 261
V + E +D G DP +A E +++ +G Y + RS+LFNL D
Sbjct: 179 VQKDNLGETKDYGTGGEKSYQDPKLLASKIEMELYKLFGGVNKKYRERGRSLLFNLKDKN 238
Query: 262 NPDFRRKVLLGHVKPEALIKMSSEEMVS 289
NPD R +V+ + E L M++EE+ S
Sbjct: 239 NPDLRERVMSEEISAERLCSMTAEELAS 266
>gi|195500468|ref|XP_002097386.1| GE26190 [Drosophila yakuba]
gi|194183487|gb|EDW97098.1| GE26190 [Drosophila yakuba]
Length = 2001
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 235 MFEKWGHSFGT-YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
MF +G G Y+ KYRS++FN+ D +N K+ V+P+ L++M+ E++ S
Sbjct: 1316 MFNSFGRDVGAKYKAKYRSLMFNIKDRKNRTLFEKICAKQVEPKQLVRMTPEQLAS 1371
>gi|359071808|ref|XP_003586878.1| PREDICTED: death-inducer obliterator 1 [Bos taurus]
Length = 2196
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 61/125 (48%), Gaps = 15/125 (12%)
Query: 173 PASAVVPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPI------- 225
P ++ P +L + + +IR+ + ++L ++ + ++N D +
Sbjct: 649 PLASPAPGRLGPVSPASSQPNSQIRQNIRRSLKEI-------LWKRVNDSDDLIMTENEV 701
Query: 226 -RVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSS 284
++A+ E MF + + Y+ KYRS++FNL DP+N +VL + L++M
Sbjct: 702 GKIALLIEKEMFNLFRVTDNRYKSKYRSLMFNLKDPKNQGLFHRVLREEISLAKLVRMKP 761
Query: 285 EEMVS 289
EE+VS
Sbjct: 762 EELVS 766
>gi|358415060|ref|XP_003582994.1| PREDICTED: death-inducer obliterator 1 isoform 2 [Bos taurus]
Length = 2196
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 61/125 (48%), Gaps = 15/125 (12%)
Query: 173 PASAVVPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPI------- 225
P ++ P +L + + +IR+ + ++L ++ + ++N D +
Sbjct: 649 PLASPAPGRLGPVSPASSQPNSQIRQNIRRSLKEI-------LWKRVNDSDDLIMTENEV 701
Query: 226 -RVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSS 284
++A+ E MF + + Y+ KYRS++FNL DP+N +VL + L++M
Sbjct: 702 GKIALLIEKEMFNLFRVTDNRYKSKYRSLMFNLKDPKNQGLFHRVLREEISLAKLVRMKP 761
Query: 285 EEMVS 289
EE+VS
Sbjct: 762 EELVS 766
>gi|258575459|ref|XP_002541911.1| transcription elongation factor S-II [Uncinocarpus reesii 1704]
gi|237902177|gb|EEP76578.1| transcription elongation factor S-II [Uncinocarpus reesii 1704]
Length = 303
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 63/140 (45%), Gaps = 12/140 (8%)
Query: 225 IRVAITAESLMFEKWG-HSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMS 283
++ +I E+ + +G + Y K RS+ NL + N R +VL + + ++M+
Sbjct: 168 LQKSIEVEAAAYNAFGPETKDQYRTKIRSLYQNLKNKSNLSLRMRVLSNEITSDKFVRMT 227
Query: 284 SEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQN 343
+E+ SD R + +I+KE D+ + K S CG+CG +K T + Q
Sbjct: 228 HDELKSDERREEDLKIQKENM-DKAMVAKAER----SISKSLQCGKCGQRKVT-YTEAQT 281
Query: 344 SSAKR-----IKCLNCYQYW 358
SA CL C + W
Sbjct: 282 RSADEPMTLFCTCLACGKSW 301
>gi|194901746|ref|XP_001980412.1| GG18883 [Drosophila erecta]
gi|190652115|gb|EDV49370.1| GG18883 [Drosophila erecta]
Length = 2004
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 235 MFEKWGHSFGT-YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
MF +G G Y+ KYRS++FN+ D +N K+ V+P+ L++M+ E++ S
Sbjct: 1321 MFNSFGRDVGAKYKAKYRSLMFNIKDRKNRTLFEKICAKQVEPKQLVRMTPEQLAS 1376
>gi|195055893|ref|XP_001994847.1| GH13879 [Drosophila grimshawi]
gi|193892610|gb|EDV91476.1| GH13879 [Drosophila grimshawi]
Length = 2061
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 232 ESLMFEKWGHSFGT-YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
ES M+ +G G Y+ KYRS++FN+ D +N K+ V+P+ L++M+ E+ S
Sbjct: 1340 ESEMYHSFGRDVGAKYKSKYRSLIFNIRDRKNKTLFEKICAKQVEPKQLVRMTPSELAS 1398
>gi|166796454|gb|AAI59331.1| Unknown (protein for IMAGE:8927043) [Xenopus (Silurana) tropicalis]
Length = 1162
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 226 RVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSE 285
R+A E MF + + Y+ KYR+I+FNL DP+N +VL + L+++ E
Sbjct: 648 RIATNIEREMFNLYRDTDSRYKAKYRNIMFNLKDPKNQGLYHRVLKEEIPLAKLVRLKPE 707
Query: 286 EMVS 289
E+ S
Sbjct: 708 ELAS 711
>gi|261338797|gb|ACX70080.1| UT01587p [Drosophila melanogaster]
Length = 1144
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 235 MFEKWGHSFGT-YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
MF +G G Y+ KYRS++FN+ D +N K+ V+P L++M+ E++ S
Sbjct: 452 MFNSFGRDVGAKYKAKYRSLMFNIKDRKNRTLFEKICAKQVEPRQLVRMTPEQLAS 507
>gi|410953420|ref|XP_003983369.1| PREDICTED: death-inducer obliterator 1 [Felis catus]
Length = 2093
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 57/108 (52%), Gaps = 7/108 (6%)
Query: 184 SMIKCNDYFRERIREKLYKALSKVSGEVDEEV--QDKLNGCDPIRVAITAESLMFEKWGH 241
++ + N R+ IR L + L K + D+ + ++++ ++A+ E +F +
Sbjct: 661 ALSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG-----KIALHIEKELFNLFQV 715
Query: 242 SFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
+ Y+ KYRSI+FNL DP+N +VL + L++M EE+VS
Sbjct: 716 TDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVS 763
>gi|398398099|ref|XP_003852507.1| hypothetical protein MYCGRDRAFT_59339, partial [Zymoseptoria
tritici IPO323]
gi|339472388|gb|EGP87483.1| hypothetical protein MYCGRDRAFT_59339 [Zymoseptoria tritici IPO323]
Length = 314
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 89/212 (41%), Gaps = 26/212 (12%)
Query: 131 KVRRVDQKGAPRSKKLVGSEFIVTEETNSLDNVDAEAIREEKPASA-----VVPQKL--- 182
K +R D AP +K L G+ + T+S +++ +++PAS V P+K
Sbjct: 84 KKKRPDSSPAPANKALNGAANGRSSGTSSPAPNGSKSEVKKEPASVPRQSKVDPEKRNTG 143
Query: 183 ---VSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKW 239
V D R+ + +Y ++ +S E + V + VA E FE +
Sbjct: 144 ADGVDHKITGDAVRDGCLKLMYDGIAFMSKESPDAV---------LTVARKVEVAAFEHF 194
Query: 240 GH-SFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQ 298
+ Y+ K RS+ NL N R+ V + PE + M+SEE+ S R +
Sbjct: 195 KRETNAEYKTKMRSLFQNLKMRSNTLLRKNVFSEEIPPEKFVAMTSEELKSAEKRAEDAL 254
Query: 299 IKKERASDRYLPWKGGYLGPIYHSTRYMCGRC 330
I+KE + P + + ST CG+C
Sbjct: 255 IEKENMNKSMTPKEAKAI-----STTMTCGKC 281
>gi|198450551|ref|XP_001358032.2| GA19664 [Drosophila pseudoobscura pseudoobscura]
gi|198131086|gb|EAL27169.2| GA19664 [Drosophila pseudoobscura pseudoobscura]
Length = 2182
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 230 TAESLMFEKWGHSFGT-YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMV 288
+ ES M+ +G G+ Y+ KYRS++FN+ D +N K+ V+P+ L+ M+ EE+
Sbjct: 1484 SVESEMYNSFGCDVGSKYKSKYRSLMFNIKDRKNKTLFEKICAKQVEPKQLVAMTPEELA 1543
Query: 289 S 289
S
Sbjct: 1544 S 1544
>gi|195329544|ref|XP_002031470.1| GM24029 [Drosophila sechellia]
gi|194120413|gb|EDW42456.1| GM24029 [Drosophila sechellia]
Length = 2010
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 235 MFEKWGHSFGT-YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
MF +G G Y+ KYRS++FN+ D +N K+ V+P L++M+ E++ S
Sbjct: 1322 MFNSFGRDVGAKYKAKYRSLMFNIKDRKNRTLFEKICAKQVEPRQLVRMTPEQLAS 1377
>gi|171473978|gb|AAW27827.2| SJCHGC09118 protein [Schistosoma japonicum]
Length = 309
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
Y+ RS + NL +P+N R +L G + PE +MS EEM ++ +RL ++ + S
Sbjct: 178 YKACIRSKVTNLRNPKNGHLRCGLLGGSLGPEVFARMSLEEMANEELQRLREEYSSQGVS 237
Query: 306 DRYLP 310
+R LP
Sbjct: 238 ERQLP 242
>gi|255932231|ref|XP_002557672.1| Pc12g08420 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582291|emb|CAP80469.1| Pc12g08420 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 877
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 106/228 (46%), Gaps = 38/228 (16%)
Query: 85 EQMKGDEENGSFAICGEIKSANVEIAKGKRQITSDEFEQALDVEVVKVRRVDQKGAPRSK 144
E ++ + N S ++ I++AN+ I +G + VK +RV + P +
Sbjct: 261 ETVEAENVNTSISLTHHIQNANMFICQGPQ---------------VKQQRVTPQSTPAAV 305
Query: 145 KLVGSEFIVTEETNSLDNVDAEAIREEKPASAVVPQKLVSMIKCNDYFRERIREKLYKAL 204
+ I T+ + A+ E PA V LV + F ++I L KA
Sbjct: 306 PEATAPQIKTDPIPEAPAI--AALEELMPARKSVATHLVKL------FVDQITAAL-KAG 356
Query: 205 SKVSGEVDEEVQDKLNGCDPIRVAITAESLMFE----KWGHSFGTYEVKYRSILFNLMDP 260
S + ++ ++D ++A++ E M+E + G Y+ + RSI+FN+
Sbjct: 357 S-FTLPANQSMEDMAQ-----QLALSIEDAMYESICGRTGEPNEAYKAQLRSIMFNVK-- 408
Query: 261 ENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRY 308
+N R ++L+G + P+ L +M++ EM S ++ + +IK+E +DR+
Sbjct: 409 KNASLRDRLLIGSLSPKLLSQMTTAEMASKELQQKDAEIKRE--ADRH 454
>gi|195166102|ref|XP_002023874.1| GL27309 [Drosophila persimilis]
gi|194106034|gb|EDW28077.1| GL27309 [Drosophila persimilis]
Length = 2185
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 230 TAESLMFEKWGHSFGT-YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMV 288
+ ES M+ +G G+ Y+ KYRS++FN+ D +N K+ V+P+ L+ M+ EE+
Sbjct: 1486 SVESEMYNSFGCDVGSKYKSKYRSLMFNIKDRKNKTLFEKICAKQVEPKQLVAMTPEELA 1545
Query: 289 S 289
S
Sbjct: 1546 S 1546
>gi|24646283|ref|NP_650193.1| protein partner of snf, isoform A [Drosophila melanogaster]
gi|7299622|gb|AAF54807.1| protein partner of snf, isoform A [Drosophila melanogaster]
Length = 2016
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 235 MFEKWGHSFGT-YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
MF +G G Y+ KYRS++FN+ D +N K+ V+P L++M+ E++ S
Sbjct: 1324 MFNSFGRDVGAKYKAKYRSLMFNIKDRKNRTLFEKICAKQVEPRQLVRMTPEQLAS 1379
>gi|386765657|ref|NP_001247075.1| protein partner of snf, isoform B [Drosophila melanogaster]
gi|383292673|gb|AFH06393.1| protein partner of snf, isoform B [Drosophila melanogaster]
Length = 2018
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 235 MFEKWGHSFGT-YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
MF +G G Y+ KYRS++FN+ D +N K+ V+P L++M+ E++ S
Sbjct: 1326 MFNSFGRDVGAKYKAKYRSLMFNIKDRKNRTLFEKICAKQVEPRQLVRMTPEQLAS 1381
>gi|340719413|ref|XP_003398148.1| PREDICTED: hypothetical protein LOC100650691 [Bombus terrestris]
Length = 2365
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Query: 194 ERIREKLYKALSKVSGEVDEEVQD-KLNGCDPIRVAITAESLMFEKWGHSFGTYEVKYRS 252
E IR + K L+++ +E +D KL + +A E +++ + + Y+ KYRS
Sbjct: 1267 EPIRLNIRKTLTELLSSRIKETEDLKLTDEEIADLAYNIELELYKYFKDTGAKYKAKYRS 1326
Query: 253 ILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
++FN+ D +N RK+ + P+A++++S +EM S
Sbjct: 1327 LVFNIKDTKNLTLFRKIADRSLTPDAVVRLSPDEMAS 1363
>gi|336262956|ref|XP_003346260.1| DST1 protein [Sordaria macrospora k-hell]
gi|380093589|emb|CCC08553.1| putative DST1 protein [Sordaria macrospora k-hell]
Length = 298
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 71/165 (43%), Gaps = 20/165 (12%)
Query: 200 LYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMD 259
LY L+ E EEV ++ A+ E+ +F+ Y K R++ +L
Sbjct: 147 LYNGLAYRRTESIEEV---------VKRAVEVENALFKACKGENQEYRSKARTLFTSLKR 197
Query: 260 PENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPI 319
+N R+V+ G + + L+ +S +E+ S+ R +++++KE +P +
Sbjct: 198 KDNAALGRRVMSGELPVDRLVVLSDKELASEEQRARDEELEKENMKKAQVP-----MAEK 252
Query: 320 YHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
S CG+CG +K + + Q SA +C C W+
Sbjct: 253 SISDALKCGKCGQRKVS-YSQAQTRSADEPMTTFCECTVCGNRWK 296
>gi|121699592|ref|XP_001268072.1| PHD finger domain protein, putative [Aspergillus clavatus NRRL 1]
gi|119396214|gb|EAW06646.1| PHD finger domain protein, putative [Aspergillus clavatus NRRL 1]
Length = 853
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 50/81 (61%), Gaps = 6/81 (7%)
Query: 226 RVAITAESLMFEKW----GHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIK 281
++ ++ E M++ G Y+++ R++LFN+ +NP R ++L+G + P+ L +
Sbjct: 293 QLGLSIEKAMYQNICGGSGEPTEAYKLQLRTVLFNVK--KNPSLRDRLLVGSLLPDKLSQ 350
Query: 282 MSSEEMVSDGSRRLNQQIKKE 302
MSS++M S+ ++ + +IK+E
Sbjct: 351 MSSQDMASEELQQKDAEIKRE 371
>gi|224002418|ref|XP_002290881.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220974303|gb|EED92633.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 2469
Score = 45.4 bits (106), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKE 302
Y K RS+ FNL DP+NP +VL G + LI MSS ++ S +++ QQ+++E
Sbjct: 2089 YRDKVRSLRFNLQDPKNPMLCARVLSGQLPISQLIVMSSADLASKELKQIRQQVQEE 2145
>gi|332807989|ref|XP_513192.3| PREDICTED: transcription elongation factor A protein 3, partial
[Pan troglodytes]
Length = 295
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 56/119 (47%), Gaps = 13/119 (10%)
Query: 173 PASAVVPQKLVSM---IKC---NDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIR 226
P+S + P SM C D R++ E L AL + D++ +D CD +
Sbjct: 162 PSSPLTPTFASSMCLLAPCYLTGDSVRDKCVEMLSAAL-----KADDDYKDYGVNCD--K 214
Query: 227 VAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSE 285
+A E ++++ + Y + RS + NL DP NP RR VL G + + KM++E
Sbjct: 215 MASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAE 273
>gi|453082690|gb|EMF10737.1| transcription elongation factor S-II [Mycosphaerella populorum
SO2202]
Length = 312
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 85/204 (41%), Gaps = 27/204 (13%)
Query: 168 IREEKPASAVVPQKLVSMIK------CNDYFRERIREKLYKALSKVSGEVDEEVQDKLNG 221
+++E+ S V P K ++ D R+ + +Y ++ +S E + V D
Sbjct: 122 LKKEQRKSTVDPSKRTTITDKIDHSVTGDKVRDGCLKLMYDGIAFMSEESPDAVFD---- 177
Query: 222 CDPIRVAITAESLMFEKWGH-SFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALI 280
VA E FE + + Y+ K RS+ NL +N RR V + + L+
Sbjct: 178 -----VARRVEVAAFEHYRQETSNDYKTKMRSLFQNLKMKDNKLLRRDVFSQKIDAKRLV 232
Query: 281 KMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGN 340
M+SE++ S+ R+ ++ +K+E P + + ST + C +C K + +
Sbjct: 233 TMTSEDLKSEDRRKEDEAMKEENMRVAMTPQEAKAI-----STTFTCAKCKESKVS-YSQ 286
Query: 341 DQNSSAKR-----IKCLNCYQYWE 359
Q SA +C C W+
Sbjct: 287 AQTRSADEPLTTFCECTVCGHRWK 310
>gi|300120315|emb|CBK19869.2| unnamed protein product [Blastocystis hominis]
Length = 214
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 53/118 (44%), Gaps = 9/118 (7%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
Y +R I FNL +N L G ++ + L M++EEM+SD R+ + IK+E
Sbjct: 99 YRQHFRDIRFNL--EKNRQLLGDWLFGELESKKLASMTAEEMMSDDVRKERETIKEEMFE 156
Query: 306 DRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYW 358
W ++ S + C RCG K T + Q SA +C+NC + W
Sbjct: 157 AYQTDWYKTHMMNKL-SGGFKCRRCGSDK-TQYMQKQTRSADEPMTVFFECMNCGKRW 212
>gi|326475222|gb|EGD99231.1| PHD finger domain-containing protein [Trichophyton tonsurans CBS
112818]
Length = 833
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 6/81 (7%)
Query: 226 RVAITAESLMFEKWGHSFG----TYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIK 281
R+ E M+ S G Y+ + R+ILFN+ +NP R +L+G P+A+
Sbjct: 309 RLGTEIEDCMYRNLCGSTGEPNDAYKNQLRTILFNVR--KNPSLRDSLLVGRTTPDAIST 366
Query: 282 MSSEEMVSDGSRRLNQQIKKE 302
MS++ M S R +++IK+E
Sbjct: 367 MSTQNMASQELREKDEEIKRE 387
>gi|326479708|gb|EGE03718.1| PHD finger domain-containing protein [Trichophyton equinum CBS
127.97]
Length = 833
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 6/81 (7%)
Query: 226 RVAITAESLMFEKWGHSFG----TYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIK 281
R+ E M+ S G Y+ + R+ILFN+ +NP R +L+G P+A+
Sbjct: 309 RLGTEIEDCMYRNLCGSTGEPNDAYKNQLRTILFNVR--KNPSLRDSLLVGRTTPDAIST 366
Query: 282 MSSEEMVSDGSRRLNQQIKKE 302
MS++ M S R +++IK+E
Sbjct: 367 MSTQNMASQELREKDEEIKRE 387
>gi|298711796|emb|CBJ32824.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 371
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 72/181 (39%), Gaps = 23/181 (12%)
Query: 192 FRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEK--WGHSFGTYEVK 249
R ++R K++ L S E DE + RVA E M E + +Y K
Sbjct: 199 LRLKMRRKMFDTLLLGSSE-DERIP-------TARVAKGVECAMNENNPYLSKKASYLDK 250
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYL 309
R ++FNL +N R+ V G V+P+ L+ M+S E+++ R + ER R L
Sbjct: 251 ARQLVFNL--KKNDQLRQDVREGLVEPQRLVAMTSTELMAKDKREAMDKAVSERTEARML 308
Query: 310 PWK-------GGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSS----AKRIKCLNCYQYW 358
W G + CGRC KTT S+ + C NC W
Sbjct: 309 DWYDKNEDKINKQCGIKETDGMFECGRCKSTKTTYTQKQTRSADEPMTTFVTCSNCKNRW 368
Query: 359 E 359
+
Sbjct: 369 K 369
>gi|302510146|ref|XP_003017033.1| PHD finger domain protein, putative [Arthroderma benhamiae CBS
112371]
gi|291180603|gb|EFE36388.1| PHD finger domain protein, putative [Arthroderma benhamiae CBS
112371]
Length = 833
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 6/81 (7%)
Query: 226 RVAITAESLMFEKWGHSFG----TYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIK 281
R+ E M+ S G Y+ + R+ILFN+ +NP R +L+G P+A+
Sbjct: 309 RLGTEIEDCMYRNLCGSAGEPNDAYKNQLRTILFNVR--KNPSLRDSLLVGRTTPDAIST 366
Query: 282 MSSEEMVSDGSRRLNQQIKKE 302
MS++ M S R +++IK+E
Sbjct: 367 MSTQNMASQELREKDEEIKRE 387
>gi|327302438|ref|XP_003235911.1| hypothetical protein TERG_02966 [Trichophyton rubrum CBS 118892]
gi|326461253|gb|EGD86706.1| hypothetical protein TERG_02966 [Trichophyton rubrum CBS 118892]
Length = 832
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 6/81 (7%)
Query: 226 RVAITAESLMFEKWGHSFG----TYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIK 281
R+ E M+ S G Y+ + R+ILFN+ +NP R +L+G P+A+
Sbjct: 310 RLGTEIEDCMYRNLCGSTGEPNDAYKNQLRTILFNVR--KNPSLRDSLLVGRTTPDAIST 367
Query: 282 MSSEEMVSDGSRRLNQQIKKE 302
MS++ M S R +++IK+E
Sbjct: 368 MSTQNMASQELREKDEEIKRE 388
>gi|339244687|ref|XP_003378269.1| putative HEAT repeat-containing domain protein [Trichinella
spiralis]
gi|316972840|gb|EFV56486.1| putative HEAT repeat-containing domain protein [Trichinella
spiralis]
Length = 2283
Score = 45.1 bits (105), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
Y + RS NL + +N R +L G + P KM++EEM + + + + ++++
Sbjct: 185 YCSEIRSHAMNLCNSKNCQLLRDILTGKILPANFAKMTTEEMAPEEVKNMRKAVERDSLK 244
Query: 306 DRYLPWKGGYLGPIYHSTRYMCGRCGHK 333
+ L +G L HST + C +CG +
Sbjct: 245 EHMLSNEGSLL----HSTTFHCRQCGQR 268
>gi|302654552|ref|XP_003019080.1| PHD finger domain protein, putative [Trichophyton verrucosum HKI
0517]
gi|291182777|gb|EFE38435.1| PHD finger domain protein, putative [Trichophyton verrucosum HKI
0517]
Length = 833
Score = 45.1 bits (105), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 6/81 (7%)
Query: 226 RVAITAESLMFEKWGHSFG----TYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIK 281
R+ E M+ S G Y+ + R+ILFN+ +NP R +L+G P+A+
Sbjct: 309 RLGTEIEDCMYRNLCGSAGEPNDAYKNQLRTILFNVR--KNPSLRDSLLVGRTTPDAIST 366
Query: 282 MSSEEMVSDGSRRLNQQIKKE 302
MS++ M S R +++IK+E
Sbjct: 367 MSTQNMASQELREKDEEIKRE 387
>gi|301628195|ref|XP_002943243.1| PREDICTED: death-inducer obliterator 1 isoform 2 [Xenopus
(Silurana) tropicalis]
Length = 2209
Score = 45.1 bits (105), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 226 RVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSE 285
R+A E MF + + Y+ KYR+I+FNL DP+N +VL + L+++ E
Sbjct: 661 RIATNIEREMFNLYRDTDSRYKAKYRNIMFNLKDPKNQGLYHRVLKEEIPLAKLVRLKPE 720
Query: 286 EMVS 289
E+ S
Sbjct: 721 ELAS 724
>gi|301628193|ref|XP_002943242.1| PREDICTED: death-inducer obliterator 1 isoform 1 [Xenopus
(Silurana) tropicalis]
Length = 2281
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 226 RVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSE 285
R+A E MF + + Y+ KYR+I+FNL DP+N +VL + L+++ E
Sbjct: 733 RIATNIEREMFNLYRDTDSRYKAKYRNIMFNLKDPKNQGLYHRVLKEEIPLAKLVRLKPE 792
Query: 286 EMVS 289
E+ S
Sbjct: 793 ELAS 796
>gi|358369364|dbj|GAA85979.1| PHD finger domain protein [Aspergillus kawachii IFO 4308]
Length = 927
Score = 45.1 bits (105), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 61/116 (52%), Gaps = 2/116 (1%)
Query: 187 KCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTY 246
K D R+ + KAL K+ E + Q++ + P + + + S +
Sbjct: 333 KSADQLTHPSRKSVAKALVKLFVEQITQAQERGSFQIPEGSGVKSVEEFARQLSLSLESA 392
Query: 247 EVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKE 302
+ R+I+FN+ +NP R ++L+G + P+AL KMS+++M S+ ++ + +IK+E
Sbjct: 393 MSQLRTIMFNVK--KNPSLRDRLLVGSLSPDALSKMSTQDMASEELQQKDAEIKRE 446
>gi|344245025|gb|EGW01129.1| SPOC domain-containing protein 1 [Cricetulus griseus]
Length = 928
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 28/43 (65%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMV 288
Y+ KYRS+LFNL DP N D KV V P+ L++MSS ++
Sbjct: 406 YKTKYRSLLFNLKDPRNSDLILKVAQCDVSPQDLVQMSSIQLA 448
>gi|429329053|gb|AFZ80812.1| transcription elongation factor S-II, putative [Babesia equi]
Length = 294
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 85/215 (39%), Gaps = 35/215 (16%)
Query: 161 DNVDAEAIREEKPASAVVPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLN 220
++ D+ + RE P SA P S ND R + L+K+ VSG +
Sbjct: 98 EHTDSSSPREP-PVSAETP---YSGALYNDEMRNKALRYLFKSF--VSG----------H 141
Query: 221 GCDPIRVAITAESLMFEKWGHSFG----------TYEVKYRSILFNLMDPENPDFRRKVL 270
C+P +A+ + L+++ G + Y ++ +SI FNL DP N F ++
Sbjct: 142 SCNP-DIAVLNK-LVYDIEGELYTHYITRLNAQKEYNLQLKSIGFNLKDPNNKSFNDRIY 199
Query: 271 LGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYLPW--KGGYLGPIYHSTRYMCG 328
G + L+ M S +M SD + I +E W K +L ++ C
Sbjct: 200 KGEINSLDLVTMKSIDMASDEKKLQRNNILQESLQACQSDWAVKNIFLNN-KSKGQFRCF 258
Query: 329 RCGHKKTTNHGNDQNSS----AKRIKCLNCYQYWE 359
+C T H SS + CL C W+
Sbjct: 259 KCKSSDTVYHQMQTRSSDEPMTTFVTCLKCQNRWK 293
>gi|440800297|gb|ELR21336.1| transcription factor sii (tfiis), central domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 653
Score = 45.1 bits (105), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 7/100 (7%)
Query: 193 RERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWG----HSFGTYEV 248
RER+ L +ALS E ++ + D V AE + E W + Y+
Sbjct: 233 RERVVASLAEALSMPRPATAE---NERSVVDAAAVQALAEGIETEMWRMFELQTSSAYKA 289
Query: 249 KYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMV 288
K+R++LFNL D N + R VL G + P L K +S+E+
Sbjct: 290 KFRTLLFNLKDERNQELRESVLSGEMAPAELCKKTSKELA 329
>gi|348680251|gb|EGZ20067.1| hypothetical protein PHYSODRAFT_495059 [Phytophthora sojae]
Length = 118
Score = 45.1 bits (105), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 53/119 (44%), Gaps = 7/119 (5%)
Query: 245 TYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERA 304
Y K R++LFNL D N D R +++ G + +L++M+ +M + R ++ ++R
Sbjct: 2 AYAHKARTLLFNLKDSRNVDLRNRLVSGELPSHSLVRMNGRDMANPQLVRQRKEWIRKRT 61
Query: 305 SDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKRIK----CLNCYQYWE 359
+ + G + S + C CG +T + + R + CL C WE
Sbjct: 62 HE---VMRDGREAEGFESDLFECRNCGSSRTRYRQWRRKAVVDRTRIIVICLRCPNRWE 117
>gi|354472422|ref|XP_003498438.1| PREDICTED: SPOC domain-containing protein 1-like [Cricetulus
griseus]
Length = 971
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 28/43 (65%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMV 288
Y+ KYRS+LFNL DP N D KV V P+ L++MSS ++
Sbjct: 407 YKTKYRSLLFNLKDPRNSDLILKVAQCDVSPQDLVQMSSIQLA 449
>gi|403215573|emb|CCK70072.1| hypothetical protein KNAG_0D03260 [Kazachstania naganishii CBS
8797]
Length = 309
Score = 44.7 bits (104), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 70/156 (44%), Gaps = 16/156 (10%)
Query: 183 VSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGH- 241
V + ++ R+ + LY AL+K S V ++ A+ E M + H
Sbjct: 139 VDTVVHHNKLRDSVVRALYDALAKDSEHPPSSV---------LQTAVDIEKEMNALYDHV 189
Query: 242 -SFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIK 300
S Y+ KYR + N++ NPD + K+ G + P+ +++ +E+ + R+ ++I
Sbjct: 190 TSEKQYKEKYRIVYSNIISRNNPDLKFKITNGDLTPQFVVQCDPKELAPEHLRQKIEEIT 249
Query: 301 KERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTT 336
K+ +G + + R+ CG+C KK +
Sbjct: 250 KQ----NLFNAQGATIERSV-TDRFQCGKCKEKKVS 280
>gi|315040700|ref|XP_003169727.1| hypothetical protein MGYG_07894 [Arthroderma gypseum CBS 118893]
gi|311345689|gb|EFR04892.1| hypothetical protein MGYG_07894 [Arthroderma gypseum CBS 118893]
Length = 849
Score = 44.7 bits (104), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 6/81 (7%)
Query: 226 RVAITAESLMFEKWGHSFG----TYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIK 281
R+ E M+ S G Y+ + R+ILFN+ +NP R +L+G P+A+
Sbjct: 325 RLGAEIEDCMYRNLCGSSGEPNDAYKNQLRTILFNVR--KNPSLRDSLLVGRTTPDAIST 382
Query: 282 MSSEEMVSDGSRRLNQQIKKE 302
MS++ M S R +++IK+E
Sbjct: 383 MSTQNMASQELREKDEEIKRE 403
>gi|297822507|ref|XP_002879136.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297826173|ref|XP_002880969.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297324975|gb|EFH55395.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297326808|gb|EFH57228.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 324
Score = 44.7 bits (104), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 3/97 (3%)
Query: 4 EVMELCEAAKRRAETAASA---EGELEEAQCIAALDQLHKSSITCQLLVSTQLVRHLLPL 60
E+++L EAAK+ A+ A + G+ E ++C+ AL L + +IT + +++ L L
Sbjct: 221 EMVKLFEAAKKAADVANAKGVLSGKAEASRCVDALSLLMEINITPKPKEPRRMMDKLEGL 280
Query: 61 TKHPRQKIQDTASELILSWRSLFLEQMKGDEENGSFA 97
TKH +KI AS L+ WR EQ + + +FA
Sbjct: 281 TKHKDRKICHAASALLHLWRQRIREQERKESSTKTFA 317
>gi|254585479|ref|XP_002498307.1| ZYRO0G07194p [Zygosaccharomyces rouxii]
gi|238941201|emb|CAR29374.1| ZYRO0G07194p [Zygosaccharomyces rouxii]
Length = 298
Score = 44.7 bits (104), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 66/158 (41%), Gaps = 32/158 (20%)
Query: 189 NDYFRERIREKLYKALSKVS----------GEVDEEVQDKLNGCDPIRVAITAESLMFEK 238
N R+ + LY AL+K S + EE +KLN CD A
Sbjct: 134 NHKLRDMVIRALYDALAKESEHPPSSVLDSAKSIEEEMNKLNNCDENEKA---------- 183
Query: 239 WGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQ 298
Y+ KYR I N++ NPD + K+ G V + L+ +E+ + ++ ++
Sbjct: 184 -------YKDKYRIIYSNIISKNNPDLKHKITNGDVTSQYLVSCDPKELAPEHLKKKLEE 236
Query: 299 IKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTT 336
I K+ + +G + + R+ CG+C KK +
Sbjct: 237 IAKQNLHN----AQGATIQRSI-TDRFTCGKCKEKKVS 269
>gi|156082914|ref|XP_001608941.1| transcription factor S-II (TFIIS)and transcription factor S-II
(TFIIS) central domain containing protein [Babesia bovis
T2Bo]
gi|154796191|gb|EDO05373.1| transcription factor S-II (TFIIS)and transcription factor S-II
(TFIIS) central domain containing protein [Babesia
bovis]
Length = 302
Score = 44.7 bits (104), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 10/105 (9%)
Query: 189 NDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGT--- 245
ND R++ L+K+L ++G+ E V D R+A E+ +F ++ ++
Sbjct: 128 NDDIRDKAIIYLFKSL--LAGK--ENVYDHKKAG---RLAYDMEAGLFSRYLYNQNNQKD 180
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSD 290
Y +K +SI FNL DP+N F K+ G ++P ++ M + EM S+
Sbjct: 181 YTLKLKSIAFNLKDPKNSTFSDKIYNGDIEPRSVAIMEAAEMASE 225
>gi|363742332|ref|XP_003642622.1| PREDICTED: transcription elongation factor A protein 3-like [Gallus
gallus]
Length = 398
Score = 44.7 bits (104), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 51/96 (53%), Gaps = 7/96 (7%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVK 249
D R++ E L AL +D++ ++ C+ ++A E +F++ + Y +
Sbjct: 240 DSVRDKCIEMLTAAL-----RMDDDYKEFGVNCE--KMASEIEDHIFQELKSTDMKYRNR 292
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSE 285
RS + NL DP+NP+ RR VL G + P + +M++E
Sbjct: 293 VRSRISNLKDPKNPNLRRNVLCGAIAPALIARMTAE 328
>gi|159481668|ref|XP_001698900.1| hypothetical protein CHLREDRAFT_159323 [Chlamydomonas reinhardtii]
gi|158273392|gb|EDO99182.1| predicted protein [Chlamydomonas reinhardtii]
Length = 229
Score = 44.7 bits (104), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 69/159 (43%), Gaps = 20/159 (12%)
Query: 216 QDKLNGCDPIRVAITAESLMFEKWGHSFGT-YEVKYRSILFNLMDPENPDFRRKVLLGHV 274
+D+ + D +A E+ +F G G Y+ R ++ +L N D R +V+ G V
Sbjct: 72 EDEGDTPDVTGLAEDIEAALFHHHGSKPGPEYKAAARLLVASL--KRNADLRGQVVSGAV 129
Query: 275 KPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHK- 333
P AL+ M S ++ + ++ + K++A R G G + +T Y C +CG
Sbjct: 130 DPAALVAMDSRQLATSQQQQEFAHL-KDKALQRVTVVGSGASGTL--TTEYACKKCGGNN 186
Query: 334 ------------KTTNHGNDQNSSAKR-IKCLNCYQYWE 359
K+ G+ + ++ R + CL C WE
Sbjct: 187 CNYIESGRRDIGKSETWGSKEGATTNRVVTCLGCGHRWE 225
>gi|402853390|ref|XP_003891378.1| PREDICTED: transcription elongation factor A protein 3-like,
partial [Papio anubis]
Length = 280
Score = 44.3 bits (103), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 7/96 (7%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVK 249
D R++ E L AL + D++ +D CD ++A E ++++ + Y +
Sbjct: 185 DSVRDKCVEMLSAAL-----KADDDYKDYGVNCD--KMASEIEDHIYQELKSTDMKYRNR 237
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSE 285
RS + NL DP NP RR VL G + + KM++E
Sbjct: 238 VRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAE 273
>gi|296813901|ref|XP_002847288.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
gi|238842544|gb|EEQ32206.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
Length = 867
Score = 44.3 bits (103), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Query: 232 ESLMFEKWGHSFG----TYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEM 287
E+ M++ S G Y+ + R+ILFN+ +NP R +L+G P+++ MS++ M
Sbjct: 345 ENCMYKNLCGSSGEPNDAYKTQLRTILFNVR--KNPSLRDSLLVGRTTPDSISTMSTQNM 402
Query: 288 VSDGSRRLNQQIKKE 302
S R +++IK+E
Sbjct: 403 ASQELREKDEEIKRE 417
>gi|401825902|ref|XP_003887045.1| transcription elongation factor S-II [Encephalitozoon hellem ATCC
50504]
gi|392998203|gb|AFM98064.1| transcription elongation factor S-II [Encephalitozoon hellem ATCC
50504]
Length = 253
Score = 44.3 bits (103), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 66/153 (43%), Gaps = 16/153 (10%)
Query: 213 EEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLG 272
E + ++ C A A+ + E +G + RS NL D NP R+V G
Sbjct: 108 EAFKTSISDCSNRHAAFLAKQITTEIFGRNPSDIAKLIRSKCLNLKDKNNPVLCRRVYDG 167
Query: 273 HVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS--DRYLPWKGGYLGPIYHSTRYMCGRC 330
+ P + M+SEEM S+ R N+++K S + +P + + + C +C
Sbjct: 168 EISPSRYVDMTSEEMKSESLR--NEEVKMIEVSLYECQIPTQKA------ETDMFKCNKC 219
Query: 331 GHKKT------TNHGNDQNSSAKRIKCLNCYQY 357
G +K T G++ ++ +C N +++
Sbjct: 220 GERKCSYRQLQTRSGDEPMTTFVTCECGNKWRF 252
>gi|303285732|ref|XP_003062156.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456567|gb|EEH53868.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 252
Score = 44.3 bits (103), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 62/150 (41%), Gaps = 16/150 (10%)
Query: 227 VAITAESLMFEKWGH--SFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSS 284
+ + E +FE G S G Y + RSI FNL +N R L G + P + +M+
Sbjct: 104 LGVKIERALFEAHGEDASNGEYRARARSIAFNLA--KNESLRVGALAGDIAPATIARMTP 161
Query: 285 EEMVSDGSRRLNQQI------KKERASDRYLPWKGGYLGPIYHSTRYMCGRCGH----KK 334
+E+ ++ R +++ K+ R + + STR R G K
Sbjct: 162 DELATEDMRNARKKMEERLTRKRTRTNMDGATETDAFACAHCRSTRCQYLRVGQVRDLGK 221
Query: 335 TTNHGN-DQNSSAK-RIKCLNCYQYWESTT 362
+ GN D AK ++CL C W +T
Sbjct: 222 SETWGNKDAADDAKVLVRCLECQAEWNEST 251
>gi|195391634|ref|XP_002054465.1| GJ24469 [Drosophila virilis]
gi|194152551|gb|EDW67985.1| GJ24469 [Drosophila virilis]
Length = 2055
Score = 44.3 bits (103), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 58/121 (47%), Gaps = 8/121 (6%)
Query: 171 EKPASAVVPQKLVSMIKCNDYFRERIREKLYKALSKV-SGEVDEEVQDKLNGCDPIRVAI 229
E+P S P+ I+ N R ++E+L + + + E+ E D L +
Sbjct: 1294 ERPVSNSQPEP----IRFN--VRRTLKEQLLSRIKEAQAAELPTEKSDWLTAAEVENFVK 1347
Query: 230 TAESLMFEKWGHSFGT-YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMV 288
ES M+ +G Y+ KYRS++FN+ D +N K+ V+P+ L++M+ E+
Sbjct: 1348 RVESEMYHSFGRDVSAKYKSKYRSLMFNIKDRKNKTLFEKICAKQVEPKQLVRMTPAELA 1407
Query: 289 S 289
S
Sbjct: 1408 S 1408
>gi|346321715|gb|EGX91314.1| transcription elongation factor s-ii [Cordyceps militaris CM01]
Length = 303
Score = 44.3 bits (103), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 52/119 (43%), Gaps = 11/119 (9%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
Y+ K RS+ NL + N V+ + PE + M+ +++ SD R+ +++KE
Sbjct: 189 YKKKIRSLFTNLKNKSNRALGVSVMGSEIPPERFVAMTDDDLKSDDQRKKEIELEKENMK 248
Query: 306 DRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
+P + S CG+C KK + + Q SA +C+NC W+
Sbjct: 249 KAQVP-----MAEKSISDSLECGKCKQKKVS-YTQAQTRSADEPMTTFCECMNCGNRWK 301
>gi|407919544|gb|EKG12774.1| Zinc finger PHD-type protein [Macrophomina phaseolina MS6]
Length = 885
Score = 44.3 bits (103), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 66/139 (47%), Gaps = 8/139 (5%)
Query: 170 EEKPASAVVPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDP----I 225
E PA+ V P + ++ D R+R+ KL L K+ E ++ +G P
Sbjct: 261 EPMPATPVTPTQPGNVDDLPDD-RKRVASKLRGDLVKLIKEASKQGYQMADGETPESLGT 319
Query: 226 RVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSE 285
R A+ E+ M + Y ++R+I+ NL P N ++L G V P+ L MS+E
Sbjct: 320 RFALDIEAAMLKYHPAGPAAYAQQFRNIVANL--PRNHSLLIQLLNGAVTPDQLATMSAE 377
Query: 286 EMVSDGSRRLNQQIKKERA 304
+M S+ ++ I KE+A
Sbjct: 378 DMASE-EQKQKDAIMKEQA 395
>gi|303388862|ref|XP_003072664.1| transcription elongation factor S-II [Encephalitozoon intestinalis
ATCC 50506]
gi|303301806|gb|ADM11304.1| transcription elongation factor S-II [Encephalitozoon intestinalis
ATCC 50506]
Length = 256
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 52/118 (44%), Gaps = 6/118 (5%)
Query: 219 LNGCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEA 278
++ C A+ A+ + E +G S RS NL D NP R+V G + P
Sbjct: 117 ISDCCNRSAALLAKQITVEIFGRSPSDIAKLVRSKCLNLKDKNNPVLCRRVYDGDISPSR 176
Query: 279 LIKMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTT 336
+ M+SEEM S+ + ++ ++ + +P + + + C +CG +K +
Sbjct: 177 YVDMTSEEMKSENLKNEEVKMIEDSLYECQIPTQKA------ETDMFKCSKCGERKCS 228
>gi|345487114|ref|XP_003425625.1| PREDICTED: hypothetical protein LOC100679883 isoform 2 [Nasonia
vitripennis]
Length = 2039
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%)
Query: 227 VAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEE 286
+A+ E MF+ + + Y+ KYRS++FN+ D +N RK+ + P A++K+S +E
Sbjct: 1337 LALQIELEMFKFFKDTGQKYKSKYRSLVFNIKDTKNLTLFRKIADRSLSPAAVVKLSPDE 1396
Query: 287 MVS 289
M S
Sbjct: 1397 MAS 1399
>gi|345487112|ref|XP_003425624.1| PREDICTED: hypothetical protein LOC100679883 isoform 1 [Nasonia
vitripennis]
Length = 2181
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%)
Query: 227 VAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEE 286
+A+ E MF+ + + Y+ KYRS++FN+ D +N RK+ + P A++K+S +E
Sbjct: 1330 LALQIELEMFKFFKDTGQKYKSKYRSLVFNIKDTKNLTLFRKIADRSLSPAAVVKLSPDE 1389
Query: 287 MVS 289
M S
Sbjct: 1390 MAS 1392
>gi|310789962|gb|EFQ25495.1| transcription elongation factor S-II [Glomerella graminicola
M1.001]
Length = 302
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 60/145 (41%), Gaps = 15/145 (10%)
Query: 224 PIRVAIT-AESLMFEKWGHSFGT---YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEAL 279
PI +T A ++ + + H G Y K RS+ NL N V+ G + PE
Sbjct: 162 PINDVLTKAVAVEYAAYIHFKGVTKEYREKLRSLFSNLKVKSNRQLGINVMEGKITPERF 221
Query: 280 IKMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHG 339
+ M+ EE+ SD R+ +++E +P + S CG+CG KK + +
Sbjct: 222 VVMTHEELKSDEQRKKEDALQQENMKKAQVPMAEKSI-----SDALKCGKCGQKKVS-YS 275
Query: 340 NDQNSSAKR-----IKCLNCYQYWE 359
Q SA +C C W+
Sbjct: 276 QAQTRSADEPMTTFCECTVCGNRWK 300
>gi|207345303|gb|EDZ72168.1| YGL043Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|323333438|gb|EGA74832.1| Dst1p [Saccharomyces cerevisiae AWRI796]
Length = 242
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 86/216 (39%), Gaps = 53/216 (24%)
Query: 132 VRRVDQKGAPRSKKLVGSEFIVTEETNSL-DNVDAEAIREEKPASAVVPQKLVSMIKCND 190
V V Q + +S + +++ T+ NS D VD +A+ KL
Sbjct: 40 VNGVQQPASSQSDAMKQDKYVSTKPRNSKNDGVD----------TAIYHHKL-------- 81
Query: 191 YFRERIREKLYKALSKVS----------GEVDEEVQDKLNGCDPIRVAITAESLMFEKWG 240
R+++ + LY L+K S + E +K+N CD A
Sbjct: 82 --RDQVLKALYDVLAKESEHPPQSILHTAKAIESEMNKVNNCDTNEAA------------ 127
Query: 241 HSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIK 300
Y+ +YR I N++ NPD + K+ G + PE L ++++ L Q+I
Sbjct: 128 -----YKARYRIIYSNVISKNNPDLKHKIANGDITPEFLATCDAKDL---APAPLKQKI- 178
Query: 301 KERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTT 336
+E A +G + + R+ CG+C KK +
Sbjct: 179 EEIAKQNLYNAQGATIERSV-TDRFTCGKCKEKKVS 213
>gi|380476055|emb|CCF44922.1| transcription elongation factor S-II [Colletotrichum higginsianum]
Length = 302
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 55/142 (38%), Gaps = 11/142 (7%)
Query: 223 DPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKM 282
D + A+ E F + Y K RS+ NL N V+ G + PE + M
Sbjct: 165 DVLAKAVAVEHAAFSHYKGVTKEYREKLRSLFSNLKVKSNRQLGVNVMEGKIAPERFVVM 224
Query: 283 SSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQ 342
+ EE+ S+ R+ ++ E +P + S CG+CG KK + + Q
Sbjct: 225 THEELKSEEQRKKEDALQLENMKKAQVPMAEKSI-----SDALKCGKCGQKKVS-YSQAQ 278
Query: 343 NSSAKR-----IKCLNCYQYWE 359
SA +C C W+
Sbjct: 279 TRSADEPMTTFCECTVCGNRWK 300
>gi|6321395|ref|NP_011472.1| Dst1p [Saccharomyces cerevisiae S288c]
gi|1729915|sp|P07273.4|TFS2_YEAST RecName: Full=Transcription elongation factor S-II; AltName:
Full=DNA strand transfer protein alpha; Short=STP-alpha;
AltName: Full=DNA strand transferase 1; AltName:
Full=Pyrimidine pathway regulatory protein 2
gi|34810565|pdb|1PQV|S Chain S, Rna Polymerase Ii-Tfiis Complex
gi|218517|dbj|BAA02046.1| transcriptional elongation factor S-II [Saccharomyces cerevisiae]
gi|1322528|emb|CAA96744.1| DST1 [Saccharomyces cerevisiae]
gi|151943248|gb|EDN61561.1| RNA polymerase II elongation factor [Saccharomyces cerevisiae
YJM789]
gi|190407007|gb|EDV10274.1| RNA polymerase II elongation factor [Saccharomyces cerevisiae
RM11-1a]
gi|256271330|gb|EEU06396.1| Dst1p [Saccharomyces cerevisiae JAY291]
gi|285812157|tpg|DAA08057.1| TPA: Dst1p [Saccharomyces cerevisiae S288c]
gi|323304905|gb|EGA58662.1| Dst1p [Saccharomyces cerevisiae FostersB]
gi|323309085|gb|EGA62313.1| Dst1p [Saccharomyces cerevisiae FostersO]
gi|323337623|gb|EGA78868.1| Dst1p [Saccharomyces cerevisiae Vin13]
gi|323348527|gb|EGA82771.1| Dst1p [Saccharomyces cerevisiae Lalvin QA23]
gi|323354949|gb|EGA86780.1| Dst1p [Saccharomyces cerevisiae VL3]
gi|349578179|dbj|GAA23345.1| K7_Dst1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365765583|gb|EHN07090.1| Dst1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299216|gb|EIW10310.1| Dst1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 309
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 64/155 (41%), Gaps = 32/155 (20%)
Query: 192 FRERIREKLYKALSKVS----------GEVDEEVQDKLNGCDPIRVAITAESLMFEKWGH 241
R+++ + LY L+K S + E +K+N CD A
Sbjct: 148 LRDQVLKALYDVLAKESEHPPQSILHTAKAIESEMNKVNNCDTNEAA------------- 194
Query: 242 SFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKK 301
Y+ +YR I N++ NPD + K+ G + PE L ++++ L Q+I +
Sbjct: 195 ----YKARYRIIYSNVISKNNPDLKHKIANGDITPEFLATCDAKDL---APAPLKQKI-E 246
Query: 302 ERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTT 336
E A +G + + R+ CG+C KK +
Sbjct: 247 EIAKQNLYNAQGATIERSV-TDRFTCGKCKEKKVS 280
>gi|171424|gb|AAA34580.1| DST1 [Saccharomyces cerevisiae]
gi|172773|gb|AAA88734.1| DNA strand transferase alpha [Saccharomyces cerevisiae]
Length = 309
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 86/216 (39%), Gaps = 53/216 (24%)
Query: 132 VRRVDQKGAPRSKKLVGSEFIVTEETNSL-DNVDAEAIREEKPASAVVPQKLVSMIKCND 190
V V Q + +S + +++ T+ NS D VD +A+ KL
Sbjct: 107 VNGVQQPASSQSDAMKQDKYVSTKPRNSKNDGVD----------TAIYHHKL-------- 148
Query: 191 YFRERIREKLYKALSKVS----------GEVDEEVQDKLNGCDPIRVAITAESLMFEKWG 240
R+++ + LY L+K S + E +K+N CD A
Sbjct: 149 --RDQVLKALYDVLAKESEHPPQSILHTAKAIESEMNKVNNCDTNEAA------------ 194
Query: 241 HSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIK 300
Y+ +YR I N++ NPD + K+ G + PE L ++++ L Q+I
Sbjct: 195 -----YKARYRIIYSNVISKNNPDLKHKIANGDITPEFLATCDAKDL---APAPLKQKI- 245
Query: 301 KERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTT 336
+E A +G + + R+ CG+C KK +
Sbjct: 246 EEIAKQNLYNAQGATIERSV-TDRFTCGKCKEKKVS 280
>gi|366987517|ref|XP_003673525.1| hypothetical protein NCAS_0A05840 [Naumovozyma castellii CBS 4309]
gi|342299388|emb|CCC67142.1| hypothetical protein NCAS_0A05840 [Naumovozyma castellii CBS 4309]
Length = 307
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 107/254 (42%), Gaps = 50/254 (19%)
Query: 103 KSANVEIAKGKRQITSDEFEQALDVEVVKVRRVDQKGAPRSKKLVGSEFIVTE-ETNSLD 161
KS NVEIAK +++ S ++ A++ R+KKL + E +T + +
Sbjct: 55 KSTNVEIAKLVKKMIS-SWKDAIN---------------RNKKLKQQQQPAKEMDTTNAN 98
Query: 162 NVDAEAIREEKPASAVV--PQKL---------------VSMIKCNDYFRERIREKLYKAL 204
V + R P+ A V P+K V+ + ND R+ + + LY AL
Sbjct: 99 GVSTDKERTTSPSDATVSSPKKQTKFTSTKPRNSKNDGVNTVVYNDKLRDSVVKALYDAL 158
Query: 205 SKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFG--TYEVKYRSILFNLMDPEN 262
+K S + + + E+ M++ S Y+ KYR I N++ N
Sbjct: 159 AKESEHPPASI---------LHTVKSIENEMYKLNNPSINERQYKEKYRIIYSNIISKNN 209
Query: 263 PDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHS 322
PD + K+ + P+ L+ +E+ + ++ ++IKK+ L G +
Sbjct: 210 PDLKNKITNNDITPDYLVNCDPKELAPEHLKKKLEEIKKQN-----LFNAQGATIERSVT 264
Query: 323 TRYMCGRCGHKKTT 336
R+ CG+C KK +
Sbjct: 265 DRFTCGKCKEKKVS 278
>gi|261205282|ref|XP_002627378.1| PHD finger domain-containing protein [Ajellomyces dermatitidis
SLH14081]
gi|239592437|gb|EEQ75018.1| PHD finger domain-containing protein [Ajellomyces dermatitidis
SLH14081]
Length = 873
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 240 GHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQI 299
G Y+ + R+ILFN+ +N R +L+G + P+AL MS+++M S R+ + +I
Sbjct: 317 GEPSEAYKQQMRTILFNVR--KNTSLRDSLLVGSISPDALATMSTQDMASKELRQKDDEI 374
Query: 300 KKE 302
K+E
Sbjct: 375 KRE 377
>gi|169867242|ref|XP_001840202.1| hypothetical protein CC1G_02665 [Coprinopsis cinerea okayama7#130]
gi|116498754|gb|EAU81649.1| hypothetical protein CC1G_02665 [Coprinopsis cinerea okayama7#130]
Length = 298
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 69/173 (39%), Gaps = 10/173 (5%)
Query: 187 KCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTY 246
+ D R++ E LY AL+ S E V ++ A E +F G + Y
Sbjct: 134 RTGDKVRDKCVELLYDALASDSTAPIEMV---------LKRASEVEEAVFNLKGGANQEY 184
Query: 247 EVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASD 306
K RS+ NL D NP + ++ G + M+SEEM S+ + ++I +E
Sbjct: 185 RGKIRSLYVNLKDKNNPTLKEDIVSGEIPASRFAVMTSEEMASEEQKAALKKIHEENLFK 244
Query: 307 RYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKRIKCLNCYQYWE 359
+ + ++ +C +++ D+ + + C+ C W+
Sbjct: 245 SLAAQEADAETDAFQCSKCKQRKCRYRQAQTRSADEPMTT-FVTCVVCGNRWK 296
>gi|358058917|dbj|GAA95315.1| hypothetical protein E5Q_01972 [Mixia osmundae IAM 14324]
Length = 330
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 54/124 (43%), Gaps = 7/124 (5%)
Query: 240 GHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQI 299
G + G Y K RS+L N D +NP R V+ G + L M + + S+ + ++++
Sbjct: 208 GDTSGDYRQKTRSLLLNFKDKKNPALREAVVSGELSASKLASMKASDFSSEERKAEDRKL 267
Query: 300 KKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKRIK----CLNCY 355
++ + + + + CG+CG ++ T + S+ + + C+ C
Sbjct: 268 AEQ---NMFAAQSAAPAAGQAKTDAFKCGKCGKRECTYYQMQTRSADEPMTTFVCCIVCN 324
Query: 356 QYWE 359
W+
Sbjct: 325 NRWK 328
>gi|325053992|pdb|3PO3|S Chain S, Arrested Rna Polymerase Ii Reactivation Intermediate
Length = 178
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 73/182 (40%), Gaps = 36/182 (19%)
Query: 192 FRERIREKLYKALSKVS----------GEVDEEVQDKLNGCDPIRVAITAESLMFEKWGH 241
R+++ + LY L+K S + E +K+N CD A
Sbjct: 17 LRDQVLKALYDVLAKESEHPPQSILHTAKAIESEMNKVNNCDTNEAA------------- 63
Query: 242 SFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKK 301
Y+ +YR I N++ NPD + K+ G + PE L ++++ L Q+I +
Sbjct: 64 ----YKARYRIIYSNVISKNNPDLKHKIANGDITPEFLATCDAKDL---APAPLKQKI-E 115
Query: 302 ERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKRI----KCLNCYQY 357
E A +G + + R+ CG+C KK + + S+A + C C
Sbjct: 116 EIAKQNLYNAQGATIERSV-TDRFTCGKCKEKKVSYYQLQTRSAAAPLTTFCTCEACGNR 174
Query: 358 WE 359
W+
Sbjct: 175 WK 176
>gi|239611404|gb|EEQ88391.1| PHD finger domain-containing protein [Ajellomyces dermatitidis
ER-3]
Length = 873
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 240 GHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQI 299
G Y+ + R+ILFN+ +N R +L+G + P+AL MS+++M S R+ + +I
Sbjct: 317 GEPSEAYKQQMRTILFNVR--KNTSLRDSLLVGSISPDALATMSTQDMASKELRQKDDEI 374
Query: 300 KKE 302
K+E
Sbjct: 375 KRE 377
>gi|327348586|gb|EGE77443.1| PHD finger domain-containing protein [Ajellomyces dermatitidis ATCC
18188]
Length = 897
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 240 GHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQI 299
G Y+ + R+ILFN+ +N R +L+G + P+AL MS+++M S R+ + +I
Sbjct: 341 GEPSEAYKQQMRTILFNVR--KNTSLRDSLLVGSISPDALATMSTQDMASKELRQKDDEI 398
Query: 300 KKE 302
K+E
Sbjct: 399 KRE 401
>gi|428183234|gb|EKX52092.1| hypothetical protein GUITHDRAFT_133829 [Guillardia theta CCMP2712]
Length = 390
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 81/203 (39%), Gaps = 36/203 (17%)
Query: 91 EENGSFAICGEIKSANVEIAKGKRQITSDEFEQ-ALDVEVVKVRRVDQKGAP-------- 141
E G+ + G NVE +IT DE + L E K + V + G P
Sbjct: 140 EGRGTSEMQGTSSLQNVE------EITMDELKALPLPGESRKEKAVKKPGKPTDEKRGDQ 193
Query: 142 ---RSKKLVGSEFI-VTEETNSLDNVDAEAIREEKPASAVVPQKLVSMIK-----CNDYF 192
SK V EF ++ E D + E K S + I+ +
Sbjct: 194 SVTESKDSVPMEFTEMSVEKGVKDGSTGSVMDESKTGSDLTGSSTAHAIRKYRHPTRNAV 253
Query: 193 RERIREKLYKALSK--VSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWG--HSFGTYEV 248
R+ IREKL AL + G DK + D +AI + +G S Y+
Sbjct: 254 RDLIREKLCDALQPHVLPG-------DKYSALDAA-IAIEHSMYQYRFFGKDESNSRYKG 305
Query: 249 KYRSILFNLMDPENPDFRRKVLL 271
+ RSILFNL D +NPD RR+V L
Sbjct: 306 RARSILFNLRDSKNPDLRRRVRL 328
>gi|148698211|gb|EDL30158.1| mCG52124 [Mus musculus]
Length = 216
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 27/43 (62%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMV 288
Y+ KYRS+LFNL DP N D KV V P L++MSS ++
Sbjct: 52 YKNKYRSLLFNLRDPRNVDLFLKVAHCDVTPNNLVQMSSIQLA 94
>gi|313768224|ref|YP_004061904.1| hypothetical protein MpV1_021c [Micromonas sp. RCC1109 virus MpV1]
gi|312598920|gb|ADQ90944.1| hypothetical protein MpV1_021c [Micromonas sp. RCC1109 virus MpV1]
Length = 171
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 62/131 (47%), Gaps = 23/131 (17%)
Query: 240 GHSFGT-YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDG------S 292
H + + Y+ K+ SI +L D NP ++ ++ +K +I M EE+ DG
Sbjct: 52 NHKYTSIYKQKFLSIQKSLKD--NPKLKKSIIEKRLKSHDVINMRPEELCPDGLYAKQIE 109
Query: 293 RRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSS----AKR 348
+++++I+KE S R + + G+ + CGRC KTT + S+
Sbjct: 110 TKIHKEIRKEYLS-REIKNQDGF---------FKCGRCKSMKTTYYQLQTRSADEPMTTF 159
Query: 349 IKCLNCYQYWE 359
+ CLNC + W+
Sbjct: 160 VSCLNCDRNWK 170
>gi|2459413|gb|AAB80648.1| hypothetical protein [Arabidopsis thaliana]
Length = 265
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 53/89 (59%), Gaps = 5/89 (5%)
Query: 2 EKEVMELCEAAKRRAETAASAEG----ELEEAQCIAALDQLHKSSITCQLLVSTQLVRHL 57
+K+++EL E AK+ A+ A+A+G E+E + C+ L L + I+ + + + +L+ L
Sbjct: 168 DKDLLELFEIAKKSAD-FANAKGILASEVETSMCVDTLALLLEFPISARAMETRKLMVRL 226
Query: 58 LPLTKHPRQKIQDTASELILSWRSLFLEQ 86
LTKH +KI ++ S+L+ WR +Q
Sbjct: 227 ENLTKHKNRKICNSVSKLLQCWRQSIRDQ 255
>gi|195110799|ref|XP_001999967.1| GI24826 [Drosophila mojavensis]
gi|193916561|gb|EDW15428.1| GI24826 [Drosophila mojavensis]
Length = 2080
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 232 ESLMFEKWGHSFGT-YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
ES M+ +G Y+ KYRS++FN+ D +N K+ V+P+ L++M+ E+ S
Sbjct: 1367 ESEMYNSFGQDVSAKYKSKYRSLMFNIKDRKNKTLFEKICAKQVEPKQLVRMTPAELAS 1425
>gi|186504949|ref|NP_180888.2| Transcription elongation factor (TFIIS) family protein [Arabidopsis
thaliana]
gi|91805477|gb|ABE65467.1| hypothetical protein At2g33300 [Arabidopsis thaliana]
gi|330253717|gb|AEC08811.1| Transcription elongation factor (TFIIS) family protein [Arabidopsis
thaliana]
Length = 276
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 53/89 (59%), Gaps = 5/89 (5%)
Query: 2 EKEVMELCEAAKRRAETAASAEG----ELEEAQCIAALDQLHKSSITCQLLVSTQLVRHL 57
+K+++EL E AK+ A+ A+A+G E+E + C+ L L + I+ + + + +L+ L
Sbjct: 179 DKDLLELFEIAKKSAD-FANAKGILASEVETSMCVDTLALLLEFPISARAMETRKLMVRL 237
Query: 58 LPLTKHPRQKIQDTASELILSWRSLFLEQ 86
LTKH +KI ++ S+L+ WR +Q
Sbjct: 238 ENLTKHKNRKICNSVSKLLQCWRQSIRDQ 266
>gi|194044760|ref|XP_001927509.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 2 [Sus scrofa]
gi|194044762|ref|XP_001927499.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 1 [Sus scrofa]
gi|194044764|ref|XP_001927522.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 3 [Sus scrofa]
gi|311275938|ref|XP_003134981.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein [Sus scrofa]
gi|311275940|ref|XP_003134982.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein [Sus scrofa]
gi|311275942|ref|XP_003134980.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein [Sus scrofa]
Length = 352
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 111/297 (37%), Gaps = 26/297 (8%)
Query: 35 LDQLHKSSITCQLLVSTQLVRHLLPLTKH-PRQKIQDTASELILSWRSLFLEQMKGDEEN 93
L +L +T +LL T +VR + + KH P ++ A L+ W++L+ + + +
Sbjct: 30 LTELETLRVTKELLQETVVVRAVYRVLKHCPTAALKKKAKCLLSKWKALYKDAQVKAKGS 89
Query: 94 GSFAICGEIKSANVEIAKGKRQITSDEFEQALDVEVVKVRRVDQKGAPRSKKLVGSEFIV 153
+ G K + ++ S + + D GAP E +
Sbjct: 90 PKLSPAGRQKEEHQRLSPN----PSQDAARGSSSSHSPQPSQDVAGAP--------EMNM 137
Query: 154 TEETNSLDNVDAEAIREEKPASAVVPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDE 213
E + +A +R P S Q + R + E LY+AL+ S E +
Sbjct: 138 PENSPGAGEPEAAHLRAGDPKS--TDQSSGELRDPTRPVRAKCTELLYEALAAFSTE--Q 193
Query: 214 EVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGH 273
D + R A E +F + Y+ RS + NL +P N R +L G
Sbjct: 194 PRADLWH-----RFAQEIEECIFTLHAKNLKKYKTCIRSKIANLKNPRNSHLRENLLSGI 248
Query: 274 VKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRC 330
+ P A +M+ +M S ++L + + LP G G R C RC
Sbjct: 249 MSPRAFAEMTVMDMASKELKQLRASYTESCIQEHSLP--QGVEGTPTKKVR--CRRC 301
>gi|239781978|pdb|3GTM|S Chain S, Co-Complex Of Backtracked Rna Polymerase Ii With Tfiis
Length = 173
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 63/155 (40%), Gaps = 32/155 (20%)
Query: 192 FRERIREKLYKALSKVS----------GEVDEEVQDKLNGCDPIRVAITAESLMFEKWGH 241
R+++ + LY L+K S + E +K+N CD A
Sbjct: 12 LRDQVLKALYDVLAKESEHPPQSILHTAKAIESEMNKVNNCDTNEAA------------- 58
Query: 242 SFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKK 301
Y+ +YR I N++ NPD + K+ G + PE L ++++ ++ ++I K
Sbjct: 59 ----YKARYRIIYSNVISKNNPDLKHKIANGDITPEFLATCDAKDLAPAPLKQKIEEIAK 114
Query: 302 ERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTT 336
+ L G + R+ CG+C KK +
Sbjct: 115 QN-----LYNAQGATIERSVTDRFTCGKCKEKKVS 144
>gi|61679514|pdb|1Y1V|S Chain S, Refined Rna Polymerase Ii-tfiis Complex
gi|61679527|pdb|1Y1Y|S Chain S, Rna Polymerase Ii-Tfiis-DnaRNA COMPLEX
Length = 179
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 64/155 (41%), Gaps = 32/155 (20%)
Query: 192 FRERIREKLYKALSKVS----------GEVDEEVQDKLNGCDPIRVAITAESLMFEKWGH 241
R+++ + LY L+K S + E +K+N CD A
Sbjct: 18 LRDQVLKALYDVLAKESEHPPQSILHTAKAIESEMNKVNNCDTNEAA------------- 64
Query: 242 SFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKK 301
Y+ +YR I N++ NPD + K+ G + PE L ++++ L Q+I +
Sbjct: 65 ----YKARYRIIYSNVISKNNPDLKHKIANGDITPEFLATCDAKDL---APAPLKQKI-E 116
Query: 302 ERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTT 336
E A +G + + R+ CG+C KK +
Sbjct: 117 EIAKQNLYNAQGATIERSV-TDRFTCGKCKEKKVS 150
>gi|47200172|emb|CAF87330.1| unnamed protein product [Tetraodon nigroviridis]
Length = 255
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 54/140 (38%), Gaps = 32/140 (22%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSE-------------------- 285
Y+ + RS + NL DP+NP R+ VL G + + MS+E
Sbjct: 122 YKNRVRSRISNLKDPKNPGLRKNVLAGTIALSRIASMSAEVGAARPDRSGAPPFHVCVST 181
Query: 286 -EMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNS 344
EM SD ++L + +E + + GG + CG+C KK + Q
Sbjct: 182 KEMASDELKQLRNTLTQEAIREHQMAKTGGTTTDLLQ-----CGKC-KKKNCTYNQVQTR 235
Query: 345 SAKR-----IKCLNCYQYWE 359
SA + C C W+
Sbjct: 236 SADEPMTTFVLCNECGNRWK 255
>gi|116830493|gb|ABK28204.1| unknown [Arabidopsis thaliana]
Length = 249
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 51/87 (58%), Gaps = 5/87 (5%)
Query: 4 EVMELCEAAKRRAETAASAEG----ELEEAQCIAALDQLHKSSITCQLLVSTQLVRHLLP 59
+ +EL E AK+ A+ A+A+G E+E + C+ L L + I+ + + + +L+ L
Sbjct: 153 DTLELFEIAKKSAD-FANAKGILASEVETSMCVDTLTLLLEFPISARDMETRKLMVRLEH 211
Query: 60 LTKHPRQKIQDTASELILSWRSLFLEQ 86
LTKH +KI ++AS+L+ WR EQ
Sbjct: 212 LTKHKNRKICNSASKLLQCWRESIREQ 238
>gi|15225791|ref|NP_180868.1| Transcription elongation factor (TFIIS) family protein [Arabidopsis
thaliana]
gi|2924782|gb|AAC04911.1| hypothetical protein [Arabidopsis thaliana]
gi|91805475|gb|ABE65466.1| unknown [Arabidopsis thaliana]
gi|330253690|gb|AEC08784.1| Transcription elongation factor (TFIIS) family protein [Arabidopsis
thaliana]
Length = 248
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 51/87 (58%), Gaps = 5/87 (5%)
Query: 4 EVMELCEAAKRRAETAASAEG----ELEEAQCIAALDQLHKSSITCQLLVSTQLVRHLLP 59
+ +EL E AK+ A+ A+A+G E+E + C+ L L + I+ + + + +L+ L
Sbjct: 153 DTLELFEIAKKSAD-FANAKGILASEVETSMCVDTLTLLLEFPISARDMETRKLMVRLEH 211
Query: 60 LTKHPRQKIQDTASELILSWRSLFLEQ 86
LTKH +KI ++AS+L+ WR EQ
Sbjct: 212 LTKHKNRKICNSASKLLQCWRESIREQ 238
>gi|452836512|gb|EME38456.1| hypothetical protein DOTSEDRAFT_75850 [Dothistroma septosporum
NZE10]
Length = 313
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 84/204 (41%), Gaps = 27/204 (13%)
Query: 168 IREEKPASAVVPQKL------VSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNG 221
+++E S V P+K V+ D R+ + +Y ++ +S E + V D
Sbjct: 123 VKKEGRKSTVDPEKRNTNTDNVNHKVTGDAVRDGCLKLMYDGIAFMSEESPDTVMD---- 178
Query: 222 CDPIRVAITAESLMFEKW-GHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALI 280
VA E FE + + Y+ K RS+ NL N R+ V ++P +
Sbjct: 179 -----VARKVELAAFEHFKSETNQDYKAKMRSLFQNLKMKNNTLLRKDVFTMKIEPTRFV 233
Query: 281 KMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGN 340
M+S+E+ S+ R+ +++++KE + + ST + CG+C + +
Sbjct: 234 TMTSDELKSEEKRKKDEELEKENMRQAMTAVEEKAI-----STTFTCGKCKQSRVA-YSQ 287
Query: 341 DQNSSAKR-----IKCLNCYQYWE 359
Q SA +C C W+
Sbjct: 288 AQTRSADEPLTTFCECTMCGHRWK 311
>gi|407263151|ref|XP_003085477.3| PREDICTED: SPOC domain-containing protein 1 [Mus musculus]
Length = 843
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 27/43 (62%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMV 288
Y+ KYRS+LFNL DP N D KV V P L++MSS ++
Sbjct: 289 YKNKYRSLLFNLRDPRNVDLFLKVAHCDVTPNNLVQMSSIQLA 331
>gi|148234998|ref|NP_001088057.1| death inducer-obliterator 1 [Xenopus laevis]
gi|52354786|gb|AAH82851.1| LOC494751 protein [Xenopus laevis]
Length = 2234
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 226 RVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSE 285
R+A E MF + + Y+ KYR+I+FNL DP+N +VL + L+++ E
Sbjct: 665 RIASNIEREMFNLYRDTDSRYKSKYRNIMFNLKDPKNQGLYHRVLKEEISLAKLVRLKPE 724
Query: 286 EMVS 289
++ S
Sbjct: 725 DLAS 728
>gi|186522138|ref|NP_196704.2| SPOC domain / Transcription elongation factor S-II protein
[Arabidopsis thaliana]
gi|332004296|gb|AED91679.1| SPOC domain / Transcription elongation factor S-II protein
[Arabidopsis thaliana]
Length = 873
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%)
Query: 223 DPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKM 282
DP +A E +++ +G Y + RS+LFNL D NP+ R +V+ + E L M
Sbjct: 260 DPKLLASKIEMELYKLFGGVNKKYRERGRSLLFNLKDKNNPELRERVMSEEISAERLCSM 319
Query: 283 SSEEMVS 289
++EE+ S
Sbjct: 320 TAEELAS 326
>gi|449020026|dbj|BAM83428.1| probable transcription elongation factor S-II [Cyanidioschyzon
merolae strain 10D]
Length = 794
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 13/119 (10%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
Y KYR + NL N D R ++L + P L+ MS+E + ++ +R +I +
Sbjct: 683 YSAKYRELKANLR--RNADLRWRLLRQELSPAELVDMSAEALKTEQAREREAEI-----A 735
Query: 306 DRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
+R L K + + ++ CG+CG + T + Q SA + C +C W+
Sbjct: 736 ERMLFHKQRGIPQAASTDQFRCGKCGQRSCT-YFQMQTRSADEPMTTFVTCTHCGNRWK 793
>gi|15240482|ref|NP_198083.1| Transcription factor IIS family protein [Arabidopsis thaliana]
gi|332006288|gb|AED93671.1| Transcription factor IIS family protein [Arabidopsis thaliana]
Length = 370
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 4 EVMELCEAAKRRAETAASA---EGELEEAQCIAALDQLHKSSITCQLLVSTQLVRHLLPL 60
E+++L EAAK+ A+ A + G+ E ++CI AL L K +IT + ++ L L
Sbjct: 263 EMVKLFEAAKKAADVANAKGVLSGKPEASRCINALSLLMKINITPKPKEPRSMMDKLEGL 322
Query: 61 TKHPRQKIQDTASELILSWRSLFLEQ 86
TKH +KI AS L+ WR EQ
Sbjct: 323 TKHKDRKICHVASALLHLWRQRIREQ 348
>gi|7573400|emb|CAB87703.1| putative protein [Arabidopsis thaliana]
Length = 871
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%)
Query: 223 DPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKM 282
DP +A E +++ +G Y + RS+LFNL D NP+ R +V+ + E L M
Sbjct: 258 DPKLLASKIEMELYKLFGGVNKKYRERGRSLLFNLKDKNNPELRERVMSEEISAERLCSM 317
Query: 283 SSEEMVS 289
++EE+ S
Sbjct: 318 TAEELAS 324
>gi|91083709|ref|XP_969911.1| PREDICTED: similar to AGAP004866-PA [Tribolium castaneum]
gi|270007882|gb|EFA04330.1| hypothetical protein TcasGA2_TC014624 [Tribolium castaneum]
Length = 1612
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 55/98 (56%), Gaps = 3/98 (3%)
Query: 192 FRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVKYR 251
R+ +++ +Y+ L+ VD+ KL+ + +++ ES +++ +G + Y KYR
Sbjct: 821 IRDNVKKTVYEQLTNRLKMVDDL---KLSEEELKNISLEIESQLYKCFGDTGQKYRNKYR 877
Query: 252 SILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
S++FN+ D +N R++ + P L+++S +++ S
Sbjct: 878 SLIFNIKDIKNQTLWRRICEKTINPYQLVRLSPDDLAS 915
>gi|355723573|gb|AES07935.1| transcription elongation factor A N-terminal and central domain
containing [Mustela putorius furo]
Length = 146
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 53/122 (43%), Gaps = 7/122 (5%)
Query: 193 RERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVKYRS 252
R R E LY+AL+ E Q K + + I E +F + Y++ RS
Sbjct: 7 RARCTELLYEALTSACTE-----QPKADVWQDLAREI--EGHLFTLHSKNLRKYKICVRS 59
Query: 253 ILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYLPWK 312
+ NL +P N ++ +L G P +M++ EM S+ ++L K + +LP
Sbjct: 60 KVANLKNPHNSHLQQNLLSGTTSPREFAEMTALEMASEELKQLRASYTKSAIREHHLPQA 119
Query: 313 GG 314
G
Sbjct: 120 AG 121
>gi|407261229|ref|XP_003086425.3| PREDICTED: SPOC domain-containing protein 1 [Mus musculus]
Length = 1090
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 27/43 (62%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMV 288
Y+ KYRS+LFNL DP N D KV V P L++MSS ++
Sbjct: 536 YKNKYRSLLFNLRDPRNVDLFLKVAHCDVTPNNLVQMSSIQLA 578
>gi|407264578|ref|XP_003945793.1| PREDICTED: SPOC domain-containing protein 1 [Mus musculus]
Length = 883
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 27/43 (62%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMV 288
Y+ KYRS+LFNL DP N D KV V P L++MSS ++
Sbjct: 329 YKNKYRSLLFNLRDPRNVDLFLKVAHCDVTPNNLVQMSSIQLA 371
>gi|295658648|ref|XP_002789884.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226282845|gb|EEH38411.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 898
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKE 302
Y+ + R+ILFN+ +N R +L+G + P+AL MS+ +M S R+ + +IK+E
Sbjct: 347 YKQQMRTILFNVR--KNTSLRDSLLVGSISPDALSTMSTHDMASKELRQKDDEIKRE 401
>gi|406607842|emb|CCH40780.1| Transcription elongation factor [Wickerhamomyces ciferrii]
Length = 240
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 61/136 (44%), Gaps = 10/136 (7%)
Query: 229 ITAESLMFEKWGHSFGT-YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEM 287
I AE EK+ S T Y + RS+ NL NP+ R K+ G + P+ I MS EM
Sbjct: 108 IEAEVFHAEKFDTSSNTKYAQRLRSLTSNLRQKNNPELRNKINNGDLLPKVFINMSPREM 167
Query: 288 VSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAK 347
+ ++ ++IKK+ + G + R+ CG+C KK + + S+ +
Sbjct: 168 APESLKKELEEIKKKNLFN-----AQGATQERAVTDRFTCGKCKEKKVSYYQLQTRSADE 222
Query: 348 RI----KCLNCYQYWE 359
+ C NC W+
Sbjct: 223 PLTTFCTCENCGNRWK 238
>gi|15225452|ref|NP_178987.1| transcription factor IIS-like protein [Arabidopsis thaliana]
gi|4558668|gb|AAD22686.1| hypothetical protein [Arabidopsis thaliana]
gi|330251155|gb|AEC06249.1| transcription factor IIS-like protein [Arabidopsis thaliana]
Length = 384
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Query: 4 EVMELCEAAKRRAETAASA---EGELEEAQCIAALDQLHKSSITCQLLVSTQLVRHLLPL 60
E+++L EAAK+ A+ A + G+ E ++CI AL L K +IT + +++ L L
Sbjct: 263 EMVKLFEAAKKAADVANAKGVLSGKPEVSRCIDALSLLMKINITPKPKEPRRMMDKLEGL 322
Query: 61 TKHPRQKIQDTASELILSWRSLFLEQ 86
TKH +KI AS L+ WR EQ
Sbjct: 323 TKHKDRKICHVASALLHLWRQRIREQ 348
>gi|320582848|gb|EFW97065.1| General transcription elongation factor TFIIS [Ogataea
parapolymorpha DL-1]
Length = 294
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 56/120 (46%), Gaps = 13/120 (10%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
Y K RS++ NL + NP+ R ++L +K + M+++E+ + +KKE A
Sbjct: 180 YRNKMRSLIMNLRNKNNPELRARLLSREIKSSKFVTMTNQELAPEA-------LKKELAD 232
Query: 306 --DRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKRI----KCLNCYQYWE 359
+ L G + + R++CG+C ++ + + S+ + + C +C W+
Sbjct: 233 LHQKNLFDAQGAVQKRAITDRFVCGKCNKREVSYYQMQTRSADEPLTTFCTCESCGNRWK 292
>gi|29423670|gb|AAO73429.1| hypothetical protein [Arabidopsis thaliana]
Length = 384
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Query: 4 EVMELCEAAKRRAETAASA---EGELEEAQCIAALDQLHKSSITCQLLVSTQLVRHLLPL 60
E+++L EAAK+ A+ A + G+ E ++CI AL L K +IT + +++ L L
Sbjct: 263 EMVKLFEAAKKAADVANAKGVLSGKPEVSRCIDALSLLMKINITPKPKEPRRMMDKLEGL 322
Query: 61 TKHPRQKIQDTASELILSWRSLFLEQ 86
TKH +KI AS L+ WR EQ
Sbjct: 323 TKHKDRKICHVASALLHLWRQRIREQ 348
>gi|226290806|gb|EEH46271.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 872
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKE 302
Y+ + R+ILFN+ +N R +L+G + P+AL MS+ +M S R+ + +IK+E
Sbjct: 323 YKQQMRTILFNVR--KNTSLRDSLLVGSISPDALSTMSTHDMASKELRQKDDEIKRE 377
>gi|225682198|gb|EEH20482.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 897
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKE 302
Y+ + R+ILFN+ +N R +L+G + P+AL MS+ +M S R+ + +IK+E
Sbjct: 348 YKQQMRTILFNVR--KNTSLRDSLLVGSISPDALSTMSTHDMASKELRQKDDEIKRE 402
>gi|67906720|gb|AAY82793.1| hypothetical protein At2g13640 [Arabidopsis thaliana]
Length = 379
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Query: 4 EVMELCEAAKRRAETAASA---EGELEEAQCIAALDQLHKSSITCQLLVSTQLVRHLLPL 60
E+++L EAAK+ A+ A + G+ E ++CI AL L K +IT + +++ L L
Sbjct: 263 EMVKLFEAAKKAADVANAKGVLSGKPEVSRCIDALSLLMKINITPKPKEPRRMMDKLEGL 322
Query: 61 TKHPRQKIQDTASELILSWRSLFLEQ 86
TKH +KI AS L+ WR EQ
Sbjct: 323 TKHKDRKICHVASALLHLWRQRIREQ 348
>gi|225557325|gb|EEH05611.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 892
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 14/104 (13%)
Query: 203 ALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKW----GHSFGTYEVKYRSILFNLM 258
A S +G+ E V + L VAI E M++ G Y+ + R+ILFN+
Sbjct: 307 AYSMPAGKTKEAVGEALG------VAI--EHAMYKHLCGGSGEPSEAYKQQMRTILFNVR 358
Query: 259 DPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKE 302
+N R +L+G + P+ L MS+++M S R+ + +IK+E
Sbjct: 359 --KNTSLRDSLLVGSISPDTLATMSTQDMASKELRQKDDEIKRE 400
>gi|325096028|gb|EGC49338.1| PHD finger domain-containing protein [Ajellomyces capsulatus H88]
Length = 896
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 14/104 (13%)
Query: 203 ALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKW----GHSFGTYEVKYRSILFNLM 258
A S +G+ E V + L VAI E M++ G Y+ + R+ILFN+
Sbjct: 307 AYSMPAGKTKEAVGEALG------VAI--EHAMYKHLCGGSGEPSEAYKQQMRTILFNVR 358
Query: 259 DPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKE 302
+N R +L+G + P+ L MS+++M S R+ + +IK+E
Sbjct: 359 --KNTSLRDSLLVGSISPDTLATMSTQDMASKELRQKDDEIKRE 400
>gi|396081166|gb|AFN82784.1| transcription elongation factor S-II [Encephalitozoon romaleae
SJ-2008]
Length = 252
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 54/126 (42%), Gaps = 10/126 (7%)
Query: 213 EEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLG 272
E + ++ C A+ A+ + E + + RS NL D NP R V G
Sbjct: 107 EAFKTSISDCSNRYAALLAKQITNEIFERNSADIAKLVRSKCLNLKDKNNPVLCRMVYDG 166
Query: 273 HVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS--DRYLPWKGGYLGPIYHSTRYMCGRC 330
+ P + M+SEEM S+ R N+++K S + +P + + + C RC
Sbjct: 167 EISPSRYVDMTSEEMKSESLR--NEEVKMIEVSLYECQIPTQKA------ETDMFKCNRC 218
Query: 331 GHKKTT 336
G +K +
Sbjct: 219 GERKCS 224
>gi|240277967|gb|EER41474.1| PHD finger domain-containing protein [Ajellomyces capsulatus H143]
Length = 851
Score = 42.0 bits (97), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 14/104 (13%)
Query: 203 ALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKW----GHSFGTYEVKYRSILFNLM 258
A S +G+ E V + L VAI E M++ G Y+ + R+ILFN+
Sbjct: 307 AYSMPAGKTKEAVGEALG------VAI--EHAMYKHLCGGSGEPSEAYKQQMRTILFNVR 358
Query: 259 DPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKE 302
+N R +L+G + P+ L MS+++M S R+ + +IK+E
Sbjct: 359 --KNTSLRDSLLVGSISPDTLATMSTQDMASKELRQKDDEIKRE 400
>gi|397624121|gb|EJK67280.1| hypothetical protein THAOC_11713 [Thalassiosira oceanica]
Length = 2246
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 34/57 (59%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKE 302
Y+ K RS+ FNL DP+NP +V++G + + LI S+E++ S + Q + ++
Sbjct: 2000 YKNKVRSLRFNLQDPKNPSLCARVIVGDMSIDELIDASAEDLASSALKEKRQAVHQK 2056
>gi|340375596|ref|XP_003386320.1| PREDICTED: PHD finger protein 3-like [Amphimedon queenslandica]
Length = 738
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
Y VK RS+LFNL D +N +K+L G + + L++MS E++ S
Sbjct: 451 YRVKCRSLLFNLKDTKNEGLFKKILCGELSTKQLVRMSPEQLAS 494
>gi|452979563|gb|EME79325.1| hypothetical protein MYCFIDRAFT_57652 [Pseudocercospora fijiensis
CIRAD86]
Length = 312
Score = 41.6 bits (96), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 88/215 (40%), Gaps = 27/215 (12%)
Query: 157 TNSLDNVDAEAIREEKPASAVVPQKLVSMIK------CNDYFRERIREKLYKALSKVSGE 210
TNS I++E+ A+ V P+K + D R+ + +Y ++ +S +
Sbjct: 111 TNSPAPPSKPEIKKEQRANKVDPEKRNTKTDGIEHEVTGDRARDGCLKLMYDGIAYMSDK 170
Query: 211 VDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGT-YEVKYRSILFNLMDPENPDFRRKV 269
+ + D VA E FE + H Y+ K RS+ NL N R+ V
Sbjct: 171 SPDAIFD---------VARKVEVAAFEHFKHQTSPEYKAKMRSLYQNLKMKGNARLRKDV 221
Query: 270 LLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGR 329
+ P+ + M+S+E+ S+ R+ + I++E + + + ST ++CG+
Sbjct: 222 YSMEIMPKRFVAMTSDELKSEEMRKEDAVIERENMNKAMTAQEEKAI-----STTFVCGK 276
Query: 330 CGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
C K + Q SA +C C W+
Sbjct: 277 CKQAKVA-YSQAQTRSADEPLTTFCECTVCGNRWK 310
>gi|154274572|ref|XP_001538137.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150414577|gb|EDN09939.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 892
Score = 41.6 bits (96), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 240 GHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQI 299
G Y+ + R+ILFN+ +N R +L+G + P+ L MS+++M S R+ + +I
Sbjct: 340 GEPSEAYKQQMRTILFNVR--KNTSLRDSLLVGSISPDTLATMSTQDMASKELRQKDDEI 397
Query: 300 KKE 302
K+E
Sbjct: 398 KRE 400
>gi|410080934|ref|XP_003958047.1| hypothetical protein KAFR_0F03160 [Kazachstania africana CBS 2517]
gi|372464634|emb|CCF58912.1| hypothetical protein KAFR_0F03160 [Kazachstania africana CBS 2517]
Length = 323
Score = 41.6 bits (96), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 66/157 (42%), Gaps = 18/157 (11%)
Query: 183 VSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHS 242
V+ I + R+ + LY AL+K E Q N + + I AE K S
Sbjct: 153 VNTIVHENKLRDSVIRALYDALAK-------ESQHPPNSILKLSIEIEAE---MNKSYDS 202
Query: 243 FGT---YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQI 299
Y+ KYR I NL+ N D + K+ G + P L+ +E+ + R+ ++I
Sbjct: 203 IANEKQYKEKYRIIYSNLISKNNSDLKFKITNGDITPVHLVNCDPKELAPEPLRKKIEEI 262
Query: 300 KKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTT 336
+ ++ L G + R+ CG+C KK +
Sbjct: 263 R-----EKNLFNAQGATIERSVTDRFTCGKCKEKKVS 294
>gi|259146459|emb|CAY79716.1| Dst1p [Saccharomyces cerevisiae EC1118]
Length = 309
Score = 41.6 bits (96), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
Query: 244 GTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKER 303
Y+ +YR I N++ NPD + K+ G + PE L ++++ L Q+I +E
Sbjct: 193 AAYKARYRIIYSNVISKNNPDLKHKIANGDITPEFLATCDAKDL---APAPLKQKI-EEI 248
Query: 304 ASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTT 336
A +G + + R+ CG+C KK +
Sbjct: 249 AKQNLYNAQGATIERSV-TDRFTCGKCKEKKVS 280
>gi|357618039|gb|EHJ71135.1| hypothetical protein KGM_08149 [Danaus plexippus]
Length = 1879
Score = 41.6 bits (96), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 16/113 (14%)
Query: 184 SMIKCNDYFRERIREKLYKALSKVSGEVD------EEVQDKLNGCDPIRVAITAESLMFE 237
S + D RE +R+ L + ++ E D EE+Q + A E + E
Sbjct: 989 SRMSSEDPIRENVRKALQEQIASRMAEYDGPKFTEEEIQ---------QFAYDTELELHE 1039
Query: 238 KWGHSFGT-YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
+ G Y+ KYRS++FN+ D +N K+ + P+ L++ S EE+ S
Sbjct: 1040 LFNRDVGMKYKAKYRSLMFNIKDRKNLSLWEKICEKVITPKQLVRFSPEELAS 1092
>gi|255071963|ref|XP_002499656.1| predicted protein [Micromonas sp. RCC299]
gi|226514918|gb|ACO60914.1| predicted protein [Micromonas sp. RCC299]
Length = 909
Score = 41.2 bits (95), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 37/65 (56%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
Y K R+++FNL D NP R +VL G + + L++MS ++ + + + ++ + +
Sbjct: 212 YNAKARTLVFNLKDIRNPGLRAEVLAGVIPADELVRMSPTDLANKDLQEMRREREAKIGE 271
Query: 306 DRYLP 310
D +LP
Sbjct: 272 DAFLP 276
>gi|328767135|gb|EGF77186.1| hypothetical protein BATDEDRAFT_27843 [Batrachochytrium
dendrobatidis JAM81]
Length = 1062
Score = 41.2 bits (95), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLG---HVKPEALIKMSSEEMVSDGSRRLNQQIKKE 302
Y+ K+RS+ +NLMD N R+++LL ++ +AL+++S +E+ ++ + ++K++
Sbjct: 371 YKAKFRSLRYNLMDVTNTRLRKRILLSGKQYLDADALVRLSPDELGNEEMKETADRVKRQ 430
Query: 303 RASDRYLP 310
+ + P
Sbjct: 431 SLKNAFKP 438
>gi|71004188|ref|XP_756760.1| hypothetical protein UM00613.1 [Ustilago maydis 521]
gi|46095649|gb|EAK80882.1| hypothetical protein UM00613.1 [Ustilago maydis 521]
Length = 1137
Score = 41.2 bits (95), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 35/57 (61%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKE 302
Y+ ++R+ LF+L D +N ++ G ++P L KM++EE+ +D R+ ++ + E
Sbjct: 436 YKDRFRTFLFSLKDAKNTTLHSRISSGQLQPSELGKMTNEELANDSIRQATEKARLE 492
>gi|388855201|emb|CCF51095.1| uncharacterized protein [Ustilago hordei]
Length = 1089
Score = 40.8 bits (94), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 34/57 (59%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKE 302
Y+ ++R+ LF+L D +N ++ G +K L KMS+EE+ +D R+ ++ + E
Sbjct: 387 YKDRFRTFLFSLKDAKNTTLHSRIATGDLKASELAKMSNEELANDAIRQATEKARLE 443
>gi|401422690|ref|XP_003875832.1| putative transcription elongation factor [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492072|emb|CBZ27346.1| putative transcription elongation factor [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 337
Score = 40.8 bits (94), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 55/115 (47%), Gaps = 9/115 (7%)
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYL 309
++++LFN+ D +N + RRKV+ G + E L+ M E+ + RR ++ +ER+ D L
Sbjct: 223 FQTLLFNIKDTKNGELRRKVMEGELLVERLVTMDDLELANPELRRHIEEKIEERSKDTNL 282
Query: 310 PWKGGYLGPIYHSTRYMCGRCGHK------KTTNHGNDQNSSAKRIKCLNCYQYW 358
+ +ST + C CG + + T G++ + I C C W
Sbjct: 283 SEIRKAMR-TSNSTLFKCRVCGARDSSWEQRQTRSGDEPMTVI--ITCNKCNTQW 334
>gi|365986008|ref|XP_003669836.1| hypothetical protein NDAI_0D02790 [Naumovozyma dairenensis CBS 421]
gi|343768605|emb|CCD24593.1| hypothetical protein NDAI_0D02790 [Naumovozyma dairenensis CBS 421]
Length = 308
Score = 40.8 bits (94), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 63/147 (42%), Gaps = 16/147 (10%)
Query: 192 FRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFE--KWGHSFGTYEVK 249
R+ + LY AL+K S + + + ES MF+ + Y+ K
Sbjct: 147 LRDSVIRALYDALAKGSEHPPNSI---------LHTVKSIESEMFKLNNCTENEKAYKEK 197
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYL 309
YR I N++ N D + K+ + PE L+ +E+ + ++ ++IKK+
Sbjct: 198 YRIIYSNIISKNNADLKNKIANNDISPEYLVTCDPKELAPEHLKQKLEEIKKQ----NLF 253
Query: 310 PWKGGYLGPIYHSTRYMCGRCGHKKTT 336
+G + + R+ CG+C KK +
Sbjct: 254 NAQGATIERSV-TDRFTCGKCKEKKVS 279
>gi|355784325|gb|EHH65176.1| Death-inducer obliterator 1 [Macaca fascicularis]
Length = 2156
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
Query: 173 PASAVVPQKLVSMI----KCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVA 228
P ++ P +L +M + N R+ IR L + L K + D+ + + + ++A
Sbjct: 626 PTASPAPGRLGAMSAAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLI---MTENEVGKIA 682
Query: 229 ITAESLMFEKWGHSFGTYEVKYRSILFNLMDPEN 262
+ E MF + + Y+ KYRSI+FNL DP+N
Sbjct: 683 LHIEKEMFNLFQVTDNRYKSKYRSIMFNLKDPKN 716
>gi|15226245|ref|NP_180346.1| transcription factor IIS-like protein [Arabidopsis thaliana]
gi|3860254|gb|AAC73022.1| hypothetical protein [Arabidopsis thaliana]
gi|330252949|gb|AEC08043.1| transcription factor IIS-like protein [Arabidopsis thaliana]
Length = 368
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 4 EVMELCEAAKRRAETAASA---EGELEEAQCIAALDQLHKSSITCQLLVSTQLVRHLLPL 60
E+++L EAAK+ A+ A + G+ E ++CI AL L K +IT + +++ L L
Sbjct: 261 EMVKLFEAAKKAADVANAKGVLSGKAEASRCIDALSVLMKINITPKPKEPRRMMDKLEGL 320
Query: 61 TKHPRQKIQDTASELILSWRSLFLEQ 86
TKH + I AS L+ WR EQ
Sbjct: 321 TKHKDRMICHVASALLHLWRQRIREQ 346
>gi|300708584|ref|XP_002996468.1| hypothetical protein NCER_100432 [Nosema ceranae BRL01]
gi|239605773|gb|EEQ82797.1| hypothetical protein NCER_100432 [Nosema ceranae BRL01]
Length = 166
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 6/86 (6%)
Query: 251 RSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYLP 310
RS FNL D NP ++V G +KP+ I MS+E+M S + ++ +E D +P
Sbjct: 59 RSKCFNLKDKNNPRICKEVYEGTIKPDEYILMSNEDMKSKDLKEQERKAYEESLYDIQMP 118
Query: 311 WKGGYLGPIYHSTRYMCGRCGHKKTT 336
+ + C CG +K++
Sbjct: 119 EIQA------ETDMFKCSTCGQRKSS 138
>gi|449299188|gb|EMC95202.1| hypothetical protein BAUCODRAFT_530419 [Baudoinia compniacensis
UAMH 10762]
Length = 311
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 68/166 (40%), Gaps = 21/166 (12%)
Query: 200 LYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGH-SFGTYEVKYRSILFNLM 258
+Y L+ +S E +EV + A + E+ F + + Y++K RS+ NL
Sbjct: 159 IYNGLAYMSEESPDEV---------LVAARSVEAAAFSVHNNETSSAYKMKMRSLFQNLK 209
Query: 259 DPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGP 318
N RR V G ++P+ + M+S+E+ + R + ++KE + +
Sbjct: 210 MKGNATLRRDVFNGKIEPKRFVTMTSDELKNAEKRAQDAALEKENMKASMTAQEEKAI-- 267
Query: 319 IYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
ST C +C + + Q SA +C NC W+
Sbjct: 268 ---STTMTCNKCKQSRVA-YTQAQTRSADEPMTTFCECTNCGNRWK 309
>gi|444318181|ref|XP_004179748.1| hypothetical protein TBLA_0C04310 [Tetrapisispora blattae CBS 6284]
gi|387512789|emb|CCH60229.1| hypothetical protein TBLA_0C04310 [Tetrapisispora blattae CBS 6284]
Length = 308
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 64/150 (42%), Gaps = 16/150 (10%)
Query: 189 NDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLM--FEKWGHSFGTY 246
N R+ + + LY AL K S E + +++A E M F + Y
Sbjct: 144 NHKLRDMVVKALYDALVKDSTESSSLI---------LKLATEVELEMKKFSDPDVNEKQY 194
Query: 247 EVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASD 306
KYR + NL+ NP+ + +++ G V P L+ +E+ + ++ ++I K
Sbjct: 195 RDKYRVVYSNLISKNNPELKFRIVGGDVSPARLVTCDPKELAPESLKKELEEIAK----- 249
Query: 307 RYLPWKGGYLGPIYHSTRYMCGRCGHKKTT 336
+ L G + R+ CG+C KK +
Sbjct: 250 KNLYNAQGATVQRSVTDRFTCGKCKEKKVS 279
>gi|393240426|gb|EJD47952.1| hypothetical protein AURDEDRAFT_86321, partial [Auricularia
delicata TFB-10046 SS5]
Length = 865
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 227 VAITA--ESLMFEKWG--------HSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKP 276
VA A E MFE + H+ G Y+ ++R + FNL + RR+++ G +
Sbjct: 229 VAFVADLEHTMFEHYAEPDKNGNPHASGKYKERFRMLTFNLSKEDRVILRRRIVSGDLPA 288
Query: 277 EALIKMSSEEMVSDGSRRLNQQIKKE 302
+ L MSS ++ S+ +++ +Q+ KE
Sbjct: 289 DELANMSSTDLASEETKQAIEQVLKE 314
>gi|4217|emb|CAA24928.1| unnamed protein product [Saccharomyces cerevisiae]
Length = 128
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Query: 244 GTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKER 303
Y+ +YR I N++ NPD + K+ G + PE L ++++ ++ ++I K+
Sbjct: 12 AAYKARYRIIYSNVISKNNPDLKHKIANGDITPEFLATCDAKDLAPAPLKQKIEEIAKQN 71
Query: 304 ASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTT 336
L G + R+ CG+C KK +
Sbjct: 72 -----LYNAQGATIERSVTDRFTCGKCKEKKVS 99
>gi|164448538|ref|NP_001019643.2| transcription elongation factor A N-terminal and central
domain-containing protein [Bos taurus]
gi|117306417|gb|AAI26749.1| LOC504389 protein [Bos taurus]
gi|296470464|tpg|DAA12579.1| TPA: TFIIS central domain-containing protein 1 [Bos taurus]
Length = 378
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 51/119 (42%), Gaps = 9/119 (7%)
Query: 193 RERIREKLYKALSKVS-GEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVKYR 251
R R E LY+AL+ S + V L A E+ +F + Y+ R
Sbjct: 201 RARCTELLYEALTASSPSQPRAHVWSNL--------AQEIEAHVFALHPKNLQKYKTCIR 252
Query: 252 SILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYLP 310
S + NL +P N ++ +L G + P KM++ EM S ++L K + YLP
Sbjct: 253 SKVANLKNPRNSHLQQNLLSGTMSPREFAKMTAMEMASQELKQLRASYTKSALREHYLP 311
>gi|18416107|ref|NP_568218.1| Transcription elongation factor (TFIIS) family protein [Arabidopsis
thaliana]
gi|395406779|sp|F4KFC7.1|MD26C_ARATH RecName: Full=Probable mediator of RNA polymerase II transcription
subunit 26c
gi|332004072|gb|AED91455.1| Transcription elongation factor (TFIIS) family protein [Arabidopsis
thaliana]
Length = 353
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 41/99 (41%), Gaps = 5/99 (5%)
Query: 25 ELEEAQCIAALDQLHKSSITCQLLVSTQLVRHLLPLTKHPRQKIQDTASELILSWRSLFL 84
+L E + L L IT Q L T + RH+ + KHP ++ A +L+ W+
Sbjct: 138 DLSEESLVELLQNLEDMDITFQALQETDIGRHVNRVRKHPSNNVRRLAKQLVKKWKETVD 197
Query: 85 EQMK----GDEENGSFAICGEIKSANVEIAKGKRQITSD 119
E +K GD E S I E + G RQ D
Sbjct: 198 EWVKFNQPGDLEPPSL-IADEDSPVQKALHNGSRQQVPD 235
>gi|71051072|gb|AAH99524.1| Phf3 protein, partial [Mus musculus]
Length = 366
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 255 FNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
FNL DP+N +KVL G V P+ LI+MS EE+ S
Sbjct: 1 FNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS 35
>gi|426222790|ref|XP_004005565.1| PREDICTED: transcription elongation factor A protein 3 [Ovis aries]
Length = 375
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 69/175 (39%), Gaps = 38/175 (21%)
Query: 190 DYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVK 249
D R++ E L AL + D++ +D CD ++A E + E WG+S G +V
Sbjct: 186 DSVRDKCVEMLSAAL-----KADDDYKDYGVNCD--KMASEIEDHILELWGYSLG--QVG 236
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYL 309
+ VL G + + KM++EEM SD R L + +E + +
Sbjct: 237 H------------------VLSGAISAGLIAKMTAEEMASDELRELRNAMTQEAIREHQM 278
Query: 310 PWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
GG ++ C +C KK + Q SA + C C W+
Sbjct: 279 AKTGGTTTDLFQ-----CSKC-KKKNCTYNQVQTRSADEPMTTFVLCNECGNRWK 327
>gi|323508155|emb|CBQ68026.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 1064
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 58/126 (46%), Gaps = 16/126 (12%)
Query: 193 RERIREKLYKALSKV-SGEV--------DEEVQDKLNGCDPIRVAITAESLMFEKWGHSF 243
R R R+ L AL K+ +G V DE+ + + + A E +FE +
Sbjct: 303 RSRARKVLATALEKIFAGAVERRPQKTDDEDAETETDEQRAESFAALLEEELFESNADAH 362
Query: 244 GT-------YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLN 296
G+ Y+ ++R+ LF+L D +N ++ G + L KMS+E + +D R+
Sbjct: 363 GSIRVVGSKYKDRFRTFLFSLKDSKNTTLHSRIASGQLDASELAKMSNEALANDAIRQAT 422
Query: 297 QQIKKE 302
++ + E
Sbjct: 423 EKARLE 428
>gi|392348387|ref|XP_003750093.1| PREDICTED: SPOC domain-containing protein 1-like [Rattus
norvegicus]
Length = 768
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKK 301
Y+ KYR++LFNL DP N D KV V P+ L++MSS ++ R Q K+
Sbjct: 212 YKSKYRNLLFNLRDPRN-DLFLKVAHCDVTPKDLVQMSSIQLAPKELSRWRDQEKR 266
>gi|16648730|gb|AAL25557.1| AT5g09850/MYH9_6 [Arabidopsis thaliana]
gi|20147241|gb|AAM10334.1| AT5g09850/MYH9_6 [Arabidopsis thaliana]
Length = 302
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 41/99 (41%), Gaps = 5/99 (5%)
Query: 25 ELEEAQCIAALDQLHKSSITCQLLVSTQLVRHLLPLTKHPRQKIQDTASELILSWRSLFL 84
+L E + L L IT Q L T + RH+ + KHP ++ A +L+ W+
Sbjct: 87 DLSEESLVELLQNLEDMDITFQALQETDIGRHVNRVRKHPSNNVRRLAKQLVKKWKETVD 146
Query: 85 EQMK----GDEENGSFAICGEIKSANVEIAKGKRQITSD 119
E +K GD E S I E + G RQ D
Sbjct: 147 EWVKFNQPGDLEPPSL-IADEDSPVQKALHNGSRQQVPD 184
>gi|149638336|ref|XP_001515301.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein-like [Ornithorhynchus
anatinus]
Length = 359
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 52/110 (47%)
Query: 201 YKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDP 260
+KA+ + G + + D+ ++A E ++ + + Y+ RS + NL +P
Sbjct: 183 HKAVGLLHGALTDSSSDQSKVDQGQKLAREIEEHIYALYSKTIKKYKNCIRSKVSNLRNP 242
Query: 261 ENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYLP 310
+N ++ + G + PEA +M+ +M SD +RL + + +LP
Sbjct: 243 KNVHLQQNLFSGSLTPEAFAEMTVMDMASDELKRLRASYTETCVQEHHLP 292
>gi|392340808|ref|XP_003754176.1| PREDICTED: SPOC domain-containing protein 1-like [Rattus
norvegicus]
Length = 663
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKK 301
Y+ KYR++LFNL DP N D KV V P+ L++MSS ++ R Q K+
Sbjct: 107 YKSKYRNLLFNLRDPRN-DLFLKVAHCDVTPKDLVQMSSIQLAPKELSRWRDQEKR 161
>gi|168060055|ref|XP_001782014.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666505|gb|EDQ53157.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 836
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 1 MEKEVMELCEAAKRRAETAASAEGELEEAQCIAALDQLHKSSITCQLLVSTQLVRHLLPL 60
ME+E + E + + A S++ +E+ + AL L I+ + L T++ + + L
Sbjct: 487 MEEEARQTLEVLRVKDILADSSQ---DESAILTALRTLEDMHISVEALKQTEIGKEVNAL 543
Query: 61 TKHPRQKIQDTASELILSWRSLFLEQMK 88
KHP ++++ A +L+ SW+ L E +K
Sbjct: 544 RKHPSKRVRSLAKDLVRSWKDLVDEWVK 571
>gi|432094051|gb|ELK25843.1| Death-inducer obliterator 1 [Myotis davidii]
Length = 1848
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 56/123 (45%), Gaps = 15/123 (12%)
Query: 174 ASAVVPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAES 233
AS+ P + S I+ N R ++E L+K + S D + + G +VA E
Sbjct: 297 ASSTTPSQPNSQIRQN--IRRSLKEILWK---RASDSDDLMMTESEVG----KVAFHIEK 347
Query: 234 LMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGH------VKPEALIKMSSEEM 287
MF + + Y+ KYRSI+FNL DP+N + L V+ EA+ M
Sbjct: 348 EMFNLFHVTDNRYKSKYRSIMFNLKDPKNQVMESRARLHQESKKTAVRQEAIPDMEDSPP 407
Query: 288 VSD 290
VSD
Sbjct: 408 VSD 410
>gi|390596600|gb|EIN06001.1| hypothetical protein PUNSTDRAFT_145392 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 995
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 37/62 (59%)
Query: 241 HSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIK 300
H+ Y+ ++R++ FNL P+ ++ H+ P+ L +MSS ++ S+ +++ +Q +
Sbjct: 323 HAGPKYKDRFRTLTFNLSQPDRVVLHERIASSHLNPKELSQMSSTDLASEEAKQTMKQAE 382
Query: 301 KE 302
KE
Sbjct: 383 KE 384
>gi|297826755|ref|XP_002881260.1| hypothetical protein ARALYDRAFT_902374 [Arabidopsis lyrata subsp.
lyrata]
gi|297327099|gb|EFH57519.1| hypothetical protein ARALYDRAFT_902374 [Arabidopsis lyrata subsp.
lyrata]
Length = 250
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Query: 4 EVMELCEAAKRRAETAASA---EGELEEAQCIAALDQLHKSSITCQLLVSTQLVRHLLPL 60
E +EL E AK+ A+ A + E+E + C+ L L + I+ + + +++ L L
Sbjct: 155 ETLELFEIAKKSADVANTKGLLAAEVETSICVDTLSLLMEFPISATAIETRRIMVRLENL 214
Query: 61 TKHPRQKIQDTASELILSWRSLFLEQ 86
TKH +KI ++A+ L+ WR +Q
Sbjct: 215 TKHKNRKICNSAAALLQCWRHSIRDQ 240
>gi|164657949|ref|XP_001730100.1| hypothetical protein MGL_2482 [Malassezia globosa CBS 7966]
gi|159103995|gb|EDP42886.1| hypothetical protein MGL_2482 [Malassezia globosa CBS 7966]
Length = 899
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 224 PIRVAITAESLMFEKWGH--SFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIK 281
P A E+ +F +G + Y+ K+RS+LFN+ D N ++ G++ ++
Sbjct: 237 PHEYASQLEAELFRVYGQDPALRAYKEKFRSLLFNVKDHRNTSLHERITSGNLPAADIVH 296
Query: 282 MSSEEMVSDGSRRLNQQIKKE 302
MS+E + +D R ++ K++
Sbjct: 297 MSNEALANDTIREATEKAKRD 317
>gi|398015843|ref|XP_003861110.1| transcription elongation factor, putative [Leishmania donovani]
gi|322499335|emb|CBZ34408.1| transcription elongation factor, putative [Leishmania donovani]
Length = 333
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 55/115 (47%), Gaps = 9/115 (7%)
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYL 309
++++LFN+ D +N + RRKV+ G + E L+ M E+ + R+ ++ +ER+ D L
Sbjct: 219 FQTLLFNIKDSKNGELRRKVMEGELLVERLVTMDDLELANPELRKHIEEKIEERSKDTNL 278
Query: 310 PWKGGYLGPIYHSTRYMCGRCGHK------KTTNHGNDQNSSAKRIKCLNCYQYW 358
+ +ST + C CG + + T G++ + I C C W
Sbjct: 279 SEIRKAMR-TSNSTLFKCRVCGARDSSWEQRQTRSGDEPMTVI--ITCNKCNTQW 330
>gi|444517013|gb|ELV11334.1| Death-inducer obliterator 1 [Tupaia chinensis]
Length = 1966
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 189 NDYFRERIREKLYKALSKVSGEVDEEV--QDKLNGCDPIRVAITAESLMFEKWGHSFGTY 246
N R+ IR L + L K + D+ + ++++ RVA+ E MF + + Y
Sbjct: 677 NSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG-----RVALHIEKEMFSLFHVTDNRY 731
Query: 247 EVKYRSILFNLMDPEN 262
+ KYRSI+FNL DP+N
Sbjct: 732 KSKYRSIMFNLKDPKN 747
>gi|50310967|ref|XP_455506.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644642|emb|CAG98214.1| KLLA0F09361p [Kluyveromyces lactis]
Length = 292
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/118 (22%), Positives = 53/118 (44%), Gaps = 9/118 (7%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
Y KYR I N++ NPD + ++ G V + L+ +++ + ++ ++I+K+
Sbjct: 178 YRDKYRIIYSNIISKNNPDLKHRITNGEVSAKHLVTADPKDLAPEHLKKKIEEIEKQN-- 235
Query: 306 DRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKRI----KCLNCYQYWE 359
L G + R+ CG+C +K + + S+ + + C NC W+
Sbjct: 236 ---LFNAQGATVERSVTDRFQCGKCKQRKVSYYQLQTRSADEPLTTFCTCENCGNRWK 290
>gi|168035960|ref|XP_001770476.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678184|gb|EDQ64645.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 592
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 75/174 (43%), Gaps = 38/174 (21%)
Query: 142 RSKKLVGSE-----FIVTEETNSLDNVDAEAIREEKPASAVVPQKLVSMIKCND------ 190
+S++ GSE TE+T++L + E P SAV + +S + N
Sbjct: 203 KSEEFYGSEPKMQSMTPTEKTDTL--------KVETPTSAVSTDQEISTLLNNQGVLTGV 254
Query: 191 YFRERIREKLYKALSKVSG-----------EVDEEVQDKLNGCDP------IRVAITAES 233
+ R+R EKL + + G E +E+ LN + + VA E
Sbjct: 255 HARDRWLEKLVHTIRDLCGGGKSFHVRNGNEGEEDANKALNEAEAEGDNQSVEVAYALEK 314
Query: 234 LMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEM 287
L + G Y +K RS+ FN+ + N R++L ++P+A+I M+ E+
Sbjct: 315 LANDSLGIDLHKYNLKMRSLDFNVKN--NNVLARRLLSKELRPDAVINMTPAEL 366
>gi|339898310|ref|XP_003392533.1| putative transcription elongation factor [Leishmania infantum
JPCM5]
gi|321399505|emb|CBZ08701.1| putative transcription elongation factor [Leishmania infantum
JPCM5]
Length = 333
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 55/115 (47%), Gaps = 9/115 (7%)
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYL 309
++++LFN+ D +N + RRKV+ G + E L+ M E+ + R+ ++ +ER+ D L
Sbjct: 219 FQTLLFNIKDSKNGELRRKVMEGELLVERLVTMDDLELANPELRKHIEEKIEERSKDTNL 278
Query: 310 PWKGGYLGPIYHSTRYMCGRCGHK------KTTNHGNDQNSSAKRIKCLNCYQYW 358
+ +ST + C CG + + T G++ + I C C W
Sbjct: 279 SEIRKAMR-TSNSTLFKCRVCGARDSSWEQRQTRSGDEPMTVI--ITCNKCNTQW 330
>gi|312281771|dbj|BAJ33751.1| unnamed protein product [Thellungiella halophila]
Length = 348
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 41/99 (41%), Gaps = 5/99 (5%)
Query: 25 ELEEAQCIAALDQLHKSSITCQLLVSTQLVRHLLPLTKHPRQKIQDTASELILSWRSLFL 84
+L E + L L IT Q L T + RH+ + KHP ++ A +L+ W+
Sbjct: 133 DLSEEALVELLQNLEDMDITFQALQETDIGRHVNRVRKHPSNNVRRLAKQLVKKWKETVD 192
Query: 85 EQMK----GDEENGSFAICGEIKSANVEIAKGKRQITSD 119
E +K GD E S I E + G RQ D
Sbjct: 193 EWVKFNQPGDLEPPSL-IADEDSPQQKALHNGNRQQVPD 230
>gi|61554104|gb|AAX46508.1| hypothetical protein MGC17403 [Bos taurus]
Length = 326
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 51/119 (42%), Gaps = 9/119 (7%)
Query: 193 RERIREKLYKALSKVS-GEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVKYR 251
R R E LY+AL+ S + V L A E+ +F + Y+ R
Sbjct: 200 RARCTELLYEALTASSPSQPRAHVWSNL--------AQEIEAHVFALHPKNLQKYKTCIR 251
Query: 252 SILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYLP 310
S + NL +P N ++ +L G + P KM++ EM S ++L K + YLP
Sbjct: 252 SKVANLKNPRNSHLQQNLLSGTMSPREFAKMTAMEMASQELKQLRASYTKSALREHYLP 310
>gi|74007121|ref|XP_537955.2| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein [Canis lupus familiaris]
Length = 348
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 109/297 (36%), Gaps = 30/297 (10%)
Query: 35 LDQLHKSSITCQLLVSTQLVRHLLPLTKH-PRQKIQDTASELILSWRSLFLEQMKGDEEN 93
L L +T + L T +VR + + KH P ++ A L+ W++L+ + + +
Sbjct: 30 LTDLETLCVTKEDLQETIVVRAVYRVLKHCPSVALKKKAKHLLSEWKALYKKDLHFKPRD 89
Query: 94 GSFAICGEIKSANVEIAKGKRQITSDEFEQALDVEVVKVRRVDQKGAPRSKKLVGSEFIV 153
SF N E ++ + DE + E IV
Sbjct: 90 KSFPT-----GRNEENSRLSHDPSQDELSGGSSSNSSSHSVAE-----------AFEMIV 133
Query: 154 TEETNSLDNVDAEAIREEKPASAVVPQKLVSMIKCNDYFRERIREKLYKALSKVSGEVDE 213
E + S E R P S Q+ ++ R + E LY+AL+ S ++
Sbjct: 134 PENSTSQTEPKEEHFRSGDPKSTA--QRSSELLDPMVPVRAKCTELLYEALT--SPFTEQ 189
Query: 214 EVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGH 273
D A E +F + Y+ RS + NL +P+N ++ +L G
Sbjct: 190 PKADLWRN-----FAREIEEHIFTLHSKNLKKYKTCVRSKVANLRNPKNSHLQQNLLSGT 244
Query: 274 VKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRC 330
+ P KM+ EM + ++L + + +LP G H+ + C RC
Sbjct: 245 MSPREFAKMTVMEMANKELKQLRASYTESCIQEHHLP--QAIEG--THTRKIKCRRC 297
>gi|361130396|gb|EHL02209.1| putative Transcription elongation factor S-II [Glarea lozoyensis
74030]
Length = 411
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 56/140 (40%), Gaps = 11/140 (7%)
Query: 225 IRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSS 284
I A+ E +E Y K RS+ NL + +N + +VL G + P + M+
Sbjct: 165 IAKAMEVEKAAYESHKGDNSDYRAKLRSLFQNLKNKDNRELGIQVLSGDILPSKFVVMTH 224
Query: 285 EEMVSDGSRRLNQQIKKERASDRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNS 344
+E+ S ++++ E +P + S CGRCG KK + + Q
Sbjct: 225 DELKSAKRIEEDKKLNYENMKMAQVPMAEKSI-----SDALRCGRCGQKKVS-YSQAQTR 278
Query: 345 SAKR-----IKCLNCYQYWE 359
SA +C C W+
Sbjct: 279 SADEPMTTFCECTVCGNRWK 298
>gi|350539011|ref|NP_001232124.1| putative transcription elongation factor A2 [Taeniopygia guttata]
gi|197129380|gb|ACH45878.1| putative transcription elongation factor A2 [Taeniopygia guttata]
Length = 229
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 186 IKCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGT 245
I C D R + RE L AL + D++ G D +A E +++ ++
Sbjct: 134 ITC-DAVRNKCREMLTAAL-----QADDDYI--AIGADCEHIAAQIEECIYQDVKNTDMK 185
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEA 278
Y+ + RS + NL D +NP+ ++ VL G + P A
Sbjct: 186 YKNRVRSRISNLKDSKNPELKKNVLCGAITPRA 218
>gi|154338127|ref|XP_001565288.1| putative transcription elongation factor [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134062337|emb|CAM42195.1| putative transcription elongation factor [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 329
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 55/115 (47%), Gaps = 9/115 (7%)
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYL 309
++++LF++ D +N + RRKV+ G + E L+ M E+ + R+ ++ +ER+ D L
Sbjct: 215 FQTLLFSIKDSKNGELRRKVVEGELLVERLVTMDDRELANPELRKQIEEKMEERSKDTNL 274
Query: 310 PWKGGYLGPIYHSTRYMCGRCG------HKKTTNHGNDQNSSAKRIKCLNCYQYW 358
+ +ST + C CG ++ T G++ + I C C W
Sbjct: 275 SEIRKAMR-TSNSTLFKCHVCGARDSSWEQRQTRSGDEPMTVI--ITCNKCSTQW 326
>gi|343427065|emb|CBQ70593.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 176
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 220 NGCDPIRVAITAESLMFEKWGHSFGTYEVKYRSILFNL---MDPENPDFRRKVLLGHVKP 276
G D + E ++EK G S YR + NL + +NP + ++ G++ P
Sbjct: 21 GGQDASTASAQLEQAVYEKSGQSTSN---DYRGDIRNLGLTLKKDNPQLAQDLVEGNIAP 77
Query: 277 EALIKMSSEEMVSDGSRRLNQQIKKE 302
E L+ M+ EE+ ++ + +QQ++++
Sbjct: 78 EQLVHMTPEELKTEEQAKQDQQLRQQ 103
>gi|157869975|ref|XP_001683538.1| putative transcription elongation factor [Leishmania major strain
Friedlin]
gi|68126604|emb|CAJ04034.1| putative transcription elongation factor [Leishmania major strain
Friedlin]
Length = 333
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 55/115 (47%), Gaps = 9/115 (7%)
Query: 250 YRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASDRYL 309
++++LFN+ D +N + RRKV+ G + E L+ M E+ + R+ ++ +ER+ D L
Sbjct: 219 FQTLLFNIKDSKNGELRRKVVEGELLVERLVTMDDLELANPELRKHIEEKIEERSKDTNL 278
Query: 310 PWKGGYLGPIYHSTRYMCGRCGHK------KTTNHGNDQNSSAKRIKCLNCYQYW 358
+ +ST + C CG + + T G++ + I C C W
Sbjct: 279 SEIRKAMR-TSNSTLFKCRVCGARDSSWEQRQTRSGDEPMTVI--ITCNKCNTQW 330
>gi|84998998|ref|XP_954220.1| transcription elongation factor [Theileria annulata]
gi|65305218|emb|CAI73543.1| transcription elongation factor, putative [Theileria annulata]
Length = 418
Score = 38.9 bits (89), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 11/122 (9%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
Y + + I FNL D +N F K+ + LI MSS +M SD + +I ++
Sbjct: 299 YNQQLKCIGFNLKDNKNTIFNYKLYNNIISINELIHMSSLQMASDEKKLQRNEILEQSLE 358
Query: 306 DRYLPWKGGYLGPIYHSTR----YMCGRCGHKKTTNHGNDQNSS----AKRIKCLNCYQY 357
W+ + I+ + + + C +C K TT + SS + CLNC
Sbjct: 359 ACQSDWE---IKNIFLNNKTKGQFKCNKCNSKITTYYQLQTRSSDEPMTTFVTCLNCNNR 415
Query: 358 WE 359
W+
Sbjct: 416 WK 417
>gi|170057596|ref|XP_001864553.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167877015|gb|EDS40398.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 895
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 235 MFEKWGHSFGT-YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
MF + GT Y KYRS++FN+ D +N +K+ ++ L++M+ EE+ S
Sbjct: 356 MFGMFNKDTGTKYRAKYRSLVFNIKDRKNLSLFQKICEKRIEARQLVRMTPEELAS 411
>gi|428184331|gb|EKX53186.1| hypothetical protein GUITHDRAFT_132948 [Guillardia theta CCMP2712]
Length = 1089
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 7/59 (11%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERA 304
Y K R +LFNL DP N R++VL + P +L+ V+D ++ N + RA
Sbjct: 1037 YNQKVRQLLFNLRDPRNDALRKQVLSSELPPSSLV-------VADPAKLANSDLAASRA 1088
>gi|20197064|gb|AAM14903.1| hypothetical protein [Arabidopsis thaliana]
Length = 333
Score = 38.5 bits (88), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 4 EVMELCEAAKRRAETAASAEGEL---EEAQ-CIAALDQLHKSSITCQLLVSTQLVRHLLP 59
E++EL E AK+ A+ A +A+G L EEA C+ L L K SI + + +++ L
Sbjct: 246 EMLELFEMAKKSADVA-NAKGFLAAKEEASICVDILALLMKFSIISTAIETRRIMEKLER 304
Query: 60 LTKHPRQKIQDTASELILSWRSLFLEQ 86
LTKH +KI + A L+ WR Q
Sbjct: 305 LTKHKDRKICNAALALLHHWRQTIRNQ 331
>gi|242053157|ref|XP_002455724.1| hypothetical protein SORBIDRAFT_03g022870 [Sorghum bicolor]
gi|241927699|gb|EES00844.1| hypothetical protein SORBIDRAFT_03g022870 [Sorghum bicolor]
Length = 636
Score = 38.5 bits (88), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 225 IRVAITAESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSS 284
+ + + E FE G FG Y K R + FN+ + + RR+++ + P L+ MS
Sbjct: 433 VEIMVALEKSAFEALGTDFGKYNQKLRQLQFNIKN--SSKLRRRLMDKELDPPVLLTMSP 490
Query: 285 EEM 287
+E+
Sbjct: 491 DEL 493
>gi|62184635|gb|AAR99369.2| hypothetical protein At2g32820 [Arabidopsis thaliana]
Length = 249
Score = 38.5 bits (88), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 4 EVMELCEAAKRRAETAASAEGEL---EEAQ-CIAALDQLHKSSITCQLLVSTQLVRHLLP 59
E++EL E AK+ A+ A +A+G L EEA C+ L L K SI + + +++ L
Sbjct: 162 EMLELFEMAKKSADVA-NAKGFLAAKEEASICVDILALLMKFSIISTAIETRRIMEKLER 220
Query: 60 LTKHPRQKIQDTASELILSWRSLFLEQ 86
LTKH +KI + A L+ WR Q
Sbjct: 221 LTKHKDRKICNAALALLHHWRQTIRNQ 247
>gi|79567610|ref|NP_180841.2| Transcription elongation factor (TFIIS) family protein [Arabidopsis
thaliana]
gi|330253652|gb|AEC08746.1| Transcription elongation factor (TFIIS) family protein [Arabidopsis
thaliana]
Length = 249
Score = 38.5 bits (88), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 4 EVMELCEAAKRRAETAASAEGEL---EEAQ-CIAALDQLHKSSITCQLLVSTQLVRHLLP 59
E++EL E AK+ A+ A +A+G L EEA C+ L L K SI + + +++ L
Sbjct: 162 EMLELFEMAKKSADVA-NAKGFLAAKEEASICVDILALLMKFSIISTAIETRRIMEKLER 220
Query: 60 LTKHPRQKIQDTASELILSWRSLFLEQ 86
LTKH +KI + A L+ WR Q
Sbjct: 221 LTKHKDRKICNAALALLHHWRQTIRNQ 247
>gi|328860041|gb|EGG09148.1| hypothetical protein MELLADRAFT_96419 [Melampsora larici-populina
98AG31]
Length = 1393
Score = 38.5 bits (88), Expect = 5.4, Method: Composition-based stats.
Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 10/105 (9%)
Query: 210 EVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGT--------YEVKYRSILFNLMDPE 261
E + E Q K + R A + ES +F+ +G Y K+RS+ FNL
Sbjct: 453 EENAENQTKEIEAEATRFAESVESELFDSFGEVDAKNVKAPRKQYMSKFRSLFFNL--KH 510
Query: 262 NPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERASD 306
NP F + + P +++ MS++++ + + ++ QI++ D
Sbjct: 511 NPVFLSSLRTTEISPRSIVHMSNQDLQTPEQKAISDQIRQRALHD 555
>gi|429855994|gb|ELA30929.1| transcription elongation factor s-ii [Colletotrichum
gloeosporioides Nara gc5]
Length = 300
Score = 38.5 bits (88), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 49/119 (41%), Gaps = 11/119 (9%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIKKERAS 305
Y+ K RS+ NL N + V+ G + P+ + M+ EE+ S R+ +++E
Sbjct: 186 YKEKVRSLFSNLKVKTNKELGVNVMEGKITPDRFVAMTQEELKSAEQRKKENLLQEENMK 245
Query: 306 DRYLPWKGGYLGPIYHSTRYMCGRCGHKKTTNHGNDQNSSAKR-----IKCLNCYQYWE 359
+P + S CG+C KK + + Q SA +C C W+
Sbjct: 246 KAQVP-----MAEKSISDALTCGKCKQKKVS-YSQAQTRSADEPMTTFCECTVCGNRWK 298
>gi|47227297|emb|CAF96846.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2196
Score = 38.5 bits (88), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 189 NDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTYEV 248
N+ R+ IR L L K + D+ K+ + R+A E MF ++ Y+
Sbjct: 635 NNQMRQNIRRSLTDILYKRVSDSDDL---KMTESEVARLAFAIEKEMFNLCLNTDSKYKR 691
Query: 249 KYRSILFNLMDP 260
KYRS++FNL DP
Sbjct: 692 KYRSLMFNLKDP 703
>gi|378706130|gb|AFC34931.1| hypothetical protein OtV6_023c [Ostreococcus tauri virus RT-2011]
Length = 171
Score = 38.5 bits (88), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 19/129 (14%)
Query: 240 GHSF-GTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDG--SRRLN 296
H + G Y+ K+ I NL + +P + +L +K + +I M E++ DG ++ +
Sbjct: 52 NHKYSGIYKQKFLQIQHNLKN--SPVLKGWILDKKIKTKDVIDMRPEDLWPDGPYAKMME 109
Query: 297 QQIKKERASDRYLPWKGGYLGPIYHSTR--YMCGRCGHKKTTNHGNDQNSS----AKRIK 350
++I KE + YL + + CGRC KKTT + S+ +
Sbjct: 110 ERIIKEM--------RKAYLAQEVKNQEGFFTCGRCKSKKTTYYQLQTRSADEPMTTFVT 161
Query: 351 CLNCYQYWE 359
CLNC + W+
Sbjct: 162 CLNCDRNWK 170
>gi|402083623|gb|EJT78641.1| hypothetical protein GGTG_03740 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 933
Score = 38.1 bits (87), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Query: 187 KCNDYFRERIREKLYKALSKVSGEVDEEVQDKLNGCDPIRVAITAESLMFEKWGHSFGTY 246
KC D+ +++ EKL +A K S V++E D L+G I+V + + WGH G
Sbjct: 357 KC-DHVDKQLHEKLQEAAEKASRRVEQEQLDPLDGLVRIKVPVVDFTRPVADWGHLAGDP 415
Query: 247 EVKYRSIL------FNL 257
+ ++ I+ FNL
Sbjct: 416 KAMFKHIIRSHPGGFNL 432
>gi|449690494|ref|XP_002161127.2| PREDICTED: uncharacterized protein LOC100205379, partial [Hydra
magnipapillata]
Length = 1145
Score = 38.1 bits (87), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 35/58 (60%)
Query: 232 ESLMFEKWGHSFGTYEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
ES + + + + Y+ K RS++FNL D +N ++V+ G + P L++M+ E++ +
Sbjct: 54 ESELLKLFVETNNKYKAKSRSLIFNLRDNQNKILYKRVVSGEITPYELVRMTPEQLAT 111
>gi|402234623|gb|AFQ37421.1| p-coumaroyl quinate/shikimate 3'-hydroxylase [Lonicera japonica]
Length = 510
Score = 37.7 bits (86), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 117 TSDEFEQALDVEVVKVRRVDQKGAPRSKKLVGSEFIVTEETNS----LDNVDAEAIREEK 172
TS E A+ E+V+ RV QK +++GSE I+TE S L +V EA+R
Sbjct: 306 TSISVEWAM-AELVRNPRVQQKAQEELDRVIGSERIMTESDFSNLPYLQSVAKEALRLHP 364
Query: 173 PASAVVPQKLVSMIKCNDY 191
P ++P K + IK Y
Sbjct: 365 PTPLMLPHKANTNIKIGGY 383
>gi|158293023|ref|XP_314320.4| AGAP004866-PA [Anopheles gambiae str. PEST]
gi|157016907|gb|EAA09679.4| AGAP004866-PA [Anopheles gambiae str. PEST]
Length = 2109
Score = 37.7 bits (86), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 235 MFEKWGHSFGT-YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVS 289
MF + G Y KYRS++FN+ D +N +K+ ++P+ L++M+++E+ S
Sbjct: 1296 MFILFNKDTGMKYRAKYRSLVFNIKDRKNLSLFQKISEKLIEPKQLVRMTADELAS 1351
>gi|301791824|ref|XP_002930880.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor A
protein 3-like [Ailuropoda melanoleuca]
Length = 285
Score = 37.7 bits (86), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%)
Query: 252 SILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQ 297
S + NL D NP RR VL G + + KM++EEM D R++ +
Sbjct: 195 SXIRNLKDXRNPSLRRNVLSGTISAGLIAKMTAEEMACDELRQITK 240
>gi|443896510|dbj|GAC73854.1| synaptic vesicle transporter SVOP and related transporters
[Pseudozyma antarctica T-34]
Length = 1093
Score = 37.7 bits (86), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 32/55 (58%)
Query: 246 YEVKYRSILFNLMDPENPDFRRKVLLGHVKPEALIKMSSEEMVSDGSRRLNQQIK 300
Y+ ++R+ LF+L D +N ++ G + L KMS+EE+ +D R+ ++ +
Sbjct: 375 YKDRFRTFLFSLKDAKNTTLHSRIASGELAAAELAKMSNEELANDTIRQATEKAR 429
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.131 0.377
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,385,137,280
Number of Sequences: 23463169
Number of extensions: 207982751
Number of successful extensions: 611848
Number of sequences better than 100.0: 944
Number of HSP's better than 100.0 without gapping: 769
Number of HSP's successfully gapped in prelim test: 175
Number of HSP's that attempted gapping in prelim test: 610674
Number of HSP's gapped (non-prelim): 1096
length of query: 370
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 226
effective length of database: 8,980,499,031
effective search space: 2029592781006
effective search space used: 2029592781006
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 77 (34.3 bits)