BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017512
(370 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6Z1G7|ODPB1_ORYSJ Pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial
OS=Oryza sativa subsp. japonica GN=Os08g0536000 PE=2
SV=1
Length = 374
Score = 640 bits (1651), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 309/336 (91%), Positives = 327/336 (97%)
Query: 35 KQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEA 94
K+M VREALNSALDEEMSADP VFLMGEEVGEYQGAYKISKGLL+KYGP+RVLDTPITEA
Sbjct: 39 KEMTVREALNSALDEEMSADPSVFLMGEEVGEYQGAYKISKGLLDKYGPDRVLDTPITEA 98
Query: 95 GFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGA 154
GFTGIGVGAAY GL+PVVEFMTFNFSMQAIDHIINSAAKSNYMS+GQI+VPIVFRGPNGA
Sbjct: 99 GFTGIGVGAAYQGLRPVVEFMTFNFSMQAIDHIINSAAKSNYMSAGQINVPIVFRGPNGA 158
Query: 155 AAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESF 214
AAGVGAQHS CYAAWYA VPGLKVL+PYS+EDARGLLKAAIRDPDPVVFLENELLYGESF
Sbjct: 159 AAGVGAQHSQCYAAWYAHVPGLKVLTPYSAEDARGLLKAAIRDPDPVVFLENELLYGESF 218
Query: 215 PVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRS 274
PVSAEVLDSSFCLPIGKAKIE+EGKDVTITAFSK+VG +L+AAEIL+KEGISAEVINLRS
Sbjct: 219 PVSAEVLDSSFCLPIGKAKIEQEGKDVTITAFSKMVGYALQAAEILSKEGISAEVINLRS 278
Query: 275 IRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGADVP 334
IRPLDR+TINASVRKTNRLVT+EEGFPQHGVGAEIC SV+E+SF YLDAPVERIAGADVP
Sbjct: 279 IRPLDRATINASVRKTNRLVTLEEGFPQHGVGAEICMSVVEDSFEYLDAPVERIAGADVP 338
Query: 335 MPYAANLERMAVPQVEDIVRAAKRACYRSVPMAAAA 370
MPYAANLERMAVPQVEDIVRAAKRACYR+VPMAA A
Sbjct: 339 MPYAANLERMAVPQVEDIVRAAKRACYRAVPMAATA 374
>sp|Q38799|ODPB1_ARATH Pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial
OS=Arabidopsis thaliana GN=PDH2 PE=1 SV=2
Length = 363
Score = 637 bits (1644), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 308/363 (84%), Positives = 337/363 (92%), Gaps = 1/363 (0%)
Query: 1 MWGIIRQKVAAGGGSPVARIRPVVSNLRNYSSAVKQMMVREALNSALDEEMSADPKVFLM 60
M GI+RQ+ A G S + R R + + R+Y++ K+M VR+ALNSA+DEEMSADPKVF+M
Sbjct: 1 MLGILRQR-AIDGASTLRRTRFALVSARSYAAGAKEMTVRDALNSAIDEEMSADPKVFVM 59
Query: 61 GEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFS 120
GEEVG+YQGAYKI+KGLLEKYGPERV DTPITEAGFTGIGVGAAY GLKPVVEFMTFNFS
Sbjct: 60 GEEVGQYQGAYKITKGLLEKYGPERVYDTPITEAGFTGIGVGAAYAGLKPVVEFMTFNFS 119
Query: 121 MQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSHCYAAWYASVPGLKVLS 180
MQAIDHIINSAAKSNYMS+GQI+VPIVFRGPNGAAAGVGAQHS CYAAWYASVPGLKVL+
Sbjct: 120 MQAIDHIINSAAKSNYMSAGQINVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLA 179
Query: 181 PYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKD 240
PYS+EDARGLLKAAIRDPDPVVFLENELLYGESFP+S E LDSSFCLPIGKAKIEREGKD
Sbjct: 180 PYSAEDARGLLKAAIRDPDPVVFLENELLYGESFPISEEALDSSFCLPIGKAKIEREGKD 239
Query: 241 VTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGF 300
VTI FSK+VG +LKAAE LA+EGISAEVINLRSIRPLDR+TINASVRKT+RLVTVEEGF
Sbjct: 240 VTIVTFSKMVGFALKAAEKLAEEGISAEVINLRSIRPLDRATINASVRKTSRLVTVEEGF 299
Query: 301 PQHGVGAEICASVIEESFGYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAKRAC 360
PQHGV AEICASV+EESF YLDAPVERIAGADVPMPYAANLER+A+PQ+EDIVRA+KRAC
Sbjct: 300 PQHGVCAEICASVVEESFSYLDAPVERIAGADVPMPYAANLERLALPQIEDIVRASKRAC 359
Query: 361 YRS 363
YRS
Sbjct: 360 YRS 362
>sp|Q0J0H4|ODPB2_ORYSJ Pyruvate dehydrogenase E1 component subunit beta-2, mitochondrial
OS=Oryza sativa subsp. japonica GN=Os09g0509200 PE=2
SV=1
Length = 376
Score = 634 bits (1635), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/376 (83%), Positives = 341/376 (90%), Gaps = 6/376 (1%)
Query: 1 MWGIIRQKVAAGG--GSPVARIRPVVSNLRNYSSAV----KQMMVREALNSALDEEMSAD 54
M G R+++ +G G + R+RP + + + A K+M VREALNSALDEEMSAD
Sbjct: 1 MLGAARRQLGSGPMLGQVLRRLRPATAAAADAARAYSAAAKEMTVREALNSALDEEMSAD 60
Query: 55 PKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEF 114
P VFLMGEEVGEYQGAYKISKGLL+KYGPERVLDTPITEAGFTGI VGAAY GL+PVVEF
Sbjct: 61 PSVFLMGEEVGEYQGAYKISKGLLDKYGPERVLDTPITEAGFTGIAVGAAYQGLRPVVEF 120
Query: 115 MTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSHCYAAWYASVP 174
MTFNFSMQAIDHIINSAAKSNYMS+GQISVPIVFRGPNGAAAGVGAQHS CYAAWYA VP
Sbjct: 121 MTFNFSMQAIDHIINSAAKSNYMSAGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYAHVP 180
Query: 175 GLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKI 234
GLKVL PYS+EDARGLLKAAIRDPDPVVFLENELLYGESFP+SAEVLDSSF LPIGKAKI
Sbjct: 181 GLKVLVPYSAEDARGLLKAAIRDPDPVVFLENELLYGESFPISAEVLDSSFALPIGKAKI 240
Query: 235 EREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLV 294
EREGKDVTITA+SK+VG +L+AA+IL+KEGISAEVINLRSIRPLDR+TINASVRKTNRLV
Sbjct: 241 EREGKDVTITAYSKMVGYALQAADILSKEGISAEVINLRSIRPLDRATINASVRKTNRLV 300
Query: 295 TVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVR 354
T+EE FPQHG+GAEIC SV+EESF YLDAPVERIAGADVPMPYAANLERMAVPQV+DIVR
Sbjct: 301 TIEESFPQHGIGAEICMSVVEESFEYLDAPVERIAGADVPMPYAANLERMAVPQVDDIVR 360
Query: 355 AAKRACYRSVPMAAAA 370
AAKRACYR+VPMAA A
Sbjct: 361 AAKRACYRAVPMAATA 376
>sp|P52904|ODPB_PEA Pyruvate dehydrogenase E1 component subunit beta, mitochondrial
OS=Pisum sativum PE=2 SV=1
Length = 359
Score = 628 bits (1619), Expect = e-179, Method: Compositional matrix adjust.
Identities = 317/370 (85%), Positives = 331/370 (89%), Gaps = 11/370 (2%)
Query: 1 MWGIIRQKVAAGGGSPVARIRPVVSNLRNYSSAVKQMMVREALNSALDEEMSADPKVFLM 60
M G+IR K IRP S R S+ KQM VR+ALNSALD EMSAD KVFLM
Sbjct: 1 MLGVIRNKT----------IRPSFSAFRF-FSSAKQMTVRDALNSALDVEMSADSKVFLM 49
Query: 61 GEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFS 120
GEEVGEYQGAYK++KGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFS
Sbjct: 50 GEEVGEYQGAYKVTKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFS 109
Query: 121 MQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSHCYAAWYASVPGLKVLS 180
MQAIDHIINSAAKSNYMS+GQISVPIVFRG NG AAGVGAQHSHCYA+WY S PGLKVL
Sbjct: 110 MQAIDHIINSAAKSNYMSAGQISVPIVFRGLNGDAAGVGAQHSHCYASWYGSCPGLKVLV 169
Query: 181 PYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKD 240
P+S+EDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSF LPIGKAKIEREGKD
Sbjct: 170 PHSAEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFWLPIGKAKIEREGKD 229
Query: 241 VTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGF 300
VTITAFSK+VG +LKAAEIL KEGISAEVINLRSIRPLDR TINASVRKTNRLVTVEEGF
Sbjct: 230 VTITAFSKMVGFALKAAEILEKEGISAEVINLRSIRPLDRPTINASVRKTNRLVTVEEGF 289
Query: 301 PQHGVGAEICASVIEESFGYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAKRAC 360
PQHGVGAEIC SVIEESFGYLDA VERI GADVPMPYA NLER+ VP VEDIVRAAKRAC
Sbjct: 290 PQHGVGAEICTSVIEESFGYLDATVERIGGADVPMPYAGNLERLVVPHVEDIVRAAKRAC 349
Query: 361 YRSVPMAAAA 370
+RSVP+AAAA
Sbjct: 350 HRSVPLAAAA 359
>sp|Q86HX0|ODPB_DICDI Pyruvate dehydrogenase E1 component subunit beta, mitochondrial
OS=Dictyostelium discoideum GN=pdhB PE=1 SV=1
Length = 356
Score = 465 bits (1197), Expect = e-130, Method: Compositional matrix adjust.
Identities = 222/352 (63%), Positives = 284/352 (80%), Gaps = 3/352 (0%)
Query: 15 SPVARIRP-VVSNLR--NYSSAVKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAY 71
S + +I+P ++ N R + A K++ VR+A+NSALDEE++ D KVF+MGEEV +Y GAY
Sbjct: 4 SILKKIQPSLLVNFRIITRTYATKEVTVRDAINSALDEELARDEKVFIMGEEVAQYNGAY 63
Query: 72 KISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSA 131
KI+KGL +KYG +R++DTPITEAGF GIGVGAA G +P++EFMTFNF+MQAIDHIINS+
Sbjct: 64 KITKGLFDKYGGDRIIDTPITEAGFAGIGVGAAMAGTRPIIEFMTFNFAMQAIDHIINSS 123
Query: 132 AKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLL 191
AK++YMS G++ PIV+RGPNG VGAQHS C+AAWY SVPGLKV++P+S+ D RGLL
Sbjct: 124 AKTHYMSGGKVFNPIVWRGPNGPPTAVGAQHSQCFAAWYGSVPGLKVVAPWSAADHRGLL 183
Query: 192 KAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVG 251
K+AIRD +PVV+LE+ELLY F +S + D + +PIGKAK+EREGKDVTI FS+IV
Sbjct: 184 KSAIRDDNPVVYLESELLYNYKFDLSDQEQDKEYLVPIGKAKVEREGKDVTIVGFSRIVS 243
Query: 252 LSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICA 311
++AAEILAKEGISAEVINLR+IRP+D TI S++KTN+LVTVEEG+ Q G+GAEI A
Sbjct: 244 NCMEAAEILAKEGISAEVINLRTIRPIDAETIVNSLKKTNKLVTVEEGWAQSGIGAEISA 303
Query: 312 SVIEESFGYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAKRACYRS 363
++E +F YLDAP+ERI GADVPMPYA+NLE A+ Q ++IV AAKR R+
Sbjct: 304 LMMEHAFDYLDAPIERICGADVPMPYASNLENAAMVQTQNIVNAAKRVTQRN 355
>sp|P32473|ODPB_YEAST Pyruvate dehydrogenase E1 component subunit beta, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PDB1 PE=1 SV=2
Length = 366
Score = 444 bits (1142), Expect = e-124, Method: Compositional matrix adjust.
Identities = 219/345 (63%), Positives = 264/345 (76%), Gaps = 3/345 (0%)
Query: 15 SPVARIRPVVSNLRNYSSAVKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKIS 74
+P + +RP + S+ K M VREALNSA+ EE+ D VFL+GEEV +Y GAYK+S
Sbjct: 17 APTSFVRPSAAAAALRFSSTKTMTVREALNSAMAEELDRDDDVFLIGEEVAQYNGAYKVS 76
Query: 75 KGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKS 134
KGLL+++G RV+DTPITE GFTG+ VGAA GLKP+VEFM+FNFSMQAIDH++NSAAK+
Sbjct: 77 KGLLDRFGERRVVDTPITEYGFTGLAVGAALKGLKPIVEFMSFNFSMQAIDHVVNSAAKT 136
Query: 135 NYMSSGQISVPIVFRGPNGAAAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAA 194
+YMS G +VFRGPNGAA GVGAQHS ++ WY S+PGLKVL PYS+EDARGLLKAA
Sbjct: 137 HYMSGGTQKCQMVFRGPNGAAVGVGAQHSQDFSPWYGSIPGLKVLVPYSAEDARGLLKAA 196
Query: 195 IRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSL 254
IRDP+PVVFLENELLYGESF +S E L F LP KAKIEREG D++I +++ V SL
Sbjct: 197 IRDPNPVVFLENELLYGESFEISEEALSPEFTLPY-KAKIEREGTDISIVTYTRNVQFSL 255
Query: 255 KAAEILAKE-GISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASV 313
+AAEIL K+ G+SAEVINLRSIRPLD I +V+KTN L+TVE FP GVGAEI A V
Sbjct: 256 EAAEILQKKYGVSAEVINLRSIRPLDTEAIIKTVKKTNHLITVESTFPSFGVGAEIVAQV 315
Query: 314 IE-ESFGYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAAK 357
+E E+F YLDAP++R+ GADVP PYA LE A P IV+A K
Sbjct: 316 MESEAFDYLDAPIQRVTGADVPTPYAKELEDFAFPDTPTIVKAVK 360
>sp|Q09171|ODPB_SCHPO Pyruvate dehydrogenase E1 component subunit beta, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=pdb1 PE=4 SV=1
Length = 366
Score = 442 bits (1136), Expect = e-123, Method: Compositional matrix adjust.
Identities = 212/333 (63%), Positives = 268/333 (80%), Gaps = 2/333 (0%)
Query: 31 SSAVKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTP 90
S+ VK+M VR+ALNSA++EEM D +VFL+GEEV +Y GAYKIS+GLL+K+GP+RV+DTP
Sbjct: 32 SNGVKEMTVRDALNSAMEEEMKRDDRVFLIGEEVAQYNGAYKISRGLLDKFGPKRVIDTP 91
Query: 91 ITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRG 150
ITE GFTG+ GAA+ GL+P+ EFMTFNFSMQAIDHI+NSAA++ YMS G + PIVFRG
Sbjct: 92 ITEMGFTGLATGAAFAGLRPICEFMTFNFSMQAIDHIVNSAARTLYMSGGIQACPIVFRG 151
Query: 151 PNGAAAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLY 210
PNG AA V AQHS +A WY S+PGLKV+SPYS+EDARGLLKAAIRDP+PVV LENE+LY
Sbjct: 152 PNGPAAAVAAQHSQHFAPWYGSIPGLKVVSPYSAEDARGLLKAAIRDPNPVVVLENEILY 211
Query: 211 GESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEIL-AKEGISAEV 269
G++FP+S E L F LP G AK+ER GKD+TI S V +L+AA+ L A G+ AEV
Sbjct: 212 GKTFPISKEALSEDFVLPFGLAKVERPGKDITIVGESISVVTALEAADKLKADYGVEAEV 271
Query: 270 INLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIE-ESFGYLDAPVERI 328
INLRSIRPLD +TI ASV+KTNR+VTV++ + QHG+G+EI A ++E ++F YLDAPVER+
Sbjct: 272 INLRSIRPLDINTIAASVKKTNRIVTVDQAYSQHGIGSEIAAQIMESDAFDYLDAPVERV 331
Query: 329 AGADVPMPYAANLERMAVPQVEDIVRAAKRACY 361
+ ADVPMPY+ +E +VP + +V AAK+ Y
Sbjct: 332 SMADVPMPYSHPVEAASVPNADVVVAAAKKCLY 364
>sp|P11966|ODPB_BOVIN Pyruvate dehydrogenase E1 component subunit beta, mitochondrial
OS=Bos taurus GN=PDHB PE=1 SV=2
Length = 359
Score = 434 bits (1116), Expect = e-121, Method: Compositional matrix adjust.
Identities = 210/328 (64%), Positives = 256/328 (78%), Gaps = 1/328 (0%)
Query: 33 AVKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPIT 92
A Q+ VREA+N +DEE+ D KVFL+GEEV +Y GAYK+S+GL +KYG +R++DTPI+
Sbjct: 29 AALQVTVREAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPIS 88
Query: 93 EAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPN 152
E GF GI VGAA GL+P+ EFMTFNFSMQAID +INSAAK+ YMS G SVPIVFRGPN
Sbjct: 89 EMGFAGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYYMSGGLQSVPIVFRGPN 148
Query: 153 GAAAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGE 212
GA+AGV AQHS C+AAWY PGLKV+SP+SSEDA+GL+K+AIRD +PVV LENEL+YG
Sbjct: 149 GASAGVAAQHSQCFAAWYGHCPGLKVVSPWSSEDAKGLIKSAIRDNNPVVVLENELMYGV 208
Query: 213 SFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINL 272
F + +E F +PIGKAKIER+G VTI A S+ VG L+AA +L+KEGI EVINL
Sbjct: 209 PFELPSEAQSKDFLIPIGKAKIERQGTHVTIVAHSRPVGHCLEAATVLSKEGIECEVINL 268
Query: 273 RSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIE-ESFGYLDAPVERIAGA 331
R+IRP+D TI SV KTN LVTVE G+PQ GVGAEICA ++E +F +LDAP R+ GA
Sbjct: 269 RTIRPMDIETIEGSVMKTNHLVTVEGGWPQFGVGAEICARIMEGPAFNFLDAPAVRVTGA 328
Query: 332 DVPMPYAANLERMAVPQVEDIVRAAKRA 359
DVPMPYA LE +VPQV+DI+ A K+
Sbjct: 329 DVPMPYAKILEDNSVPQVKDIIFAIKKT 356
>sp|Q9R9N4|ODPB_RHIME Pyruvate dehydrogenase E1 component subunit beta OS=Rhizobium
meliloti (strain 1021) GN=pdhB PE=3 SV=2
Length = 460
Score = 433 bits (1114), Expect = e-121, Method: Compositional matrix adjust.
Identities = 205/326 (62%), Positives = 257/326 (78%), Gaps = 3/326 (0%)
Query: 37 MMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGF 96
M VREAL A+ EEM A+ VF+MGEEV EYQGAYK+++GLL+++G RV+DTPITE GF
Sbjct: 138 MTVREALRDAMAEEMRANEDVFVMGEEVAEYQGAYKVTQGLLQEFGARRVVDTPITEHGF 197
Query: 97 TGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAA 156
G+GVGAA GL+P+VEFMTFNF+MQAID IINSAAK+ YMS GQ+ PIVFRGP+GAAA
Sbjct: 198 AGVGVGAAMTGLRPIVEFMTFNFAMQAIDQIINSAAKTLYMSGGQMGAPIVFRGPSGAAA 257
Query: 157 GVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPV 216
V AQHS CYAAWY+ +PGLKV+ PY++ DA+GLLKAAIRDP+PV+FLENE+LYG+SF V
Sbjct: 258 RVAAQHSQCYAAWYSHIPGLKVVMPYTAADAKGLLKAAIRDPNPVIFLENEILYGQSFEV 317
Query: 217 SAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIR 276
LD F LPIGKA+I R GKD T+ +F + ++KAA L +GI E+I+LR+IR
Sbjct: 318 PK--LD-DFVLPIGKARIHRTGKDATLVSFGIGMTYAIKAAAELEAQGIDVEIIDLRTIR 374
Query: 277 PLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGADVPMP 336
P+D T+ SV+KT RLVTVEEG+PQ VG EI V++++F YLDAP+ IAG DVPMP
Sbjct: 375 PMDLPTVIESVKKTGRLVTVEEGYPQSSVGTEIATRVMQQAFDYLDAPILTIAGKDVPMP 434
Query: 337 YAANLERMAVPQVEDIVRAAKRACYR 362
YAANLE++A+P V ++V A K CY+
Sbjct: 435 YAANLEKLALPNVAEVVDAVKAVCYK 460
>sp|Q9D051|ODPB_MOUSE Pyruvate dehydrogenase E1 component subunit beta, mitochondrial
OS=Mus musculus GN=Pdhb PE=1 SV=1
Length = 359
Score = 433 bits (1113), Expect = e-120, Method: Compositional matrix adjust.
Identities = 207/327 (63%), Positives = 257/327 (78%), Gaps = 1/327 (0%)
Query: 33 AVKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPIT 92
A Q+ VREA+N +DEE+ D KVFL+GEEV +Y GAYK+S+GL +KYG +R++DTPI+
Sbjct: 29 AAVQLTVREAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPIS 88
Query: 93 EAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPN 152
E GF GI VGAA GL+P+ EFMTFNFSMQAID +INSAAK+ YMS+G VPIVFRGPN
Sbjct: 89 EMGFAGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYYMSAGLQPVPIVFRGPN 148
Query: 153 GAAAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGE 212
GA+AGV AQHS C+AAWY PGLKV+SP++SEDA+GL+K+AIRD +PVV LENEL+YG
Sbjct: 149 GASAGVAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKSAIRDNNPVVMLENELMYGV 208
Query: 213 SFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINL 272
+F + AE F +PIGKAKIER+G +T+ A S+ VG L+AA +L+KEGI EVINL
Sbjct: 209 AFELPAEAQSKDFLIPIGKAKIERQGTHITVVAHSRPVGHCLEAAAVLSKEGIECEVINL 268
Query: 273 RSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIE-ESFGYLDAPVERIAGA 331
R+IRP+D I ASV KTN LVTVE G+PQ GVGAEICA ++E +F +LDAP R+ GA
Sbjct: 269 RTIRPMDIEAIEASVMKTNHLVTVEGGWPQFGVGAEICARIMEGPAFNFLDAPAVRVTGA 328
Query: 332 DVPMPYAANLERMAVPQVEDIVRAAKR 358
DVPMPYA LE +VPQV+DI+ A K+
Sbjct: 329 DVPMPYAKVLEDNSVPQVKDIIFAVKK 355
>sp|P49432|ODPB_RAT Pyruvate dehydrogenase E1 component subunit beta, mitochondrial
OS=Rattus norvegicus GN=Pdhb PE=1 SV=2
Length = 359
Score = 430 bits (1106), Expect = e-120, Method: Compositional matrix adjust.
Identities = 205/327 (62%), Positives = 256/327 (78%), Gaps = 1/327 (0%)
Query: 33 AVKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPIT 92
A Q+ VREA+N +DEE+ D KVFL+GEEV +Y GAYK+S+GL +KYG +R++DTPI+
Sbjct: 29 AAVQLTVREAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPIS 88
Query: 93 EAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPN 152
E GF GI VGAA GL+P+ EFMTFNFSMQAID +INSAAK+ YMS+G VPIVFRGPN
Sbjct: 89 EMGFAGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYYMSAGLQPVPIVFRGPN 148
Query: 153 GAAAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGE 212
GA+AGV AQHS C+AAWY PGLKV+SP++SEDA+GL+K+AIRD +PVV LENEL+YG
Sbjct: 149 GASAGVAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKSAIRDDNPVVMLENELMYGV 208
Query: 213 SFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINL 272
+F + E F +PIGKAKIER+G +T+ A S+ VG L+AA +L+KEGI EVINL
Sbjct: 209 AFELPTEAQSKDFLIPIGKAKIERQGTHITVVAHSRPVGHCLEAAAVLSKEGIECEVINL 268
Query: 273 RSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIE-ESFGYLDAPVERIAGA 331
R+IRP+D I ASV KTN LVTVE G+PQ GVGAEICA ++E +F +LDAP R+ GA
Sbjct: 269 RTIRPMDIEAIEASVMKTNHLVTVEGGWPQFGVGAEICARIMEGPAFNFLDAPAVRVTGA 328
Query: 332 DVPMPYAANLERMAVPQVEDIVRAAKR 358
DVPMPYA LE ++PQV+DI+ A K+
Sbjct: 329 DVPMPYAKILEDNSIPQVKDIIFAIKK 355
>sp|O44451|ODPB_CAEEL Pyruvate dehydrogenase E1 component subunit beta, mitochondrial
OS=Caenorhabditis elegans GN=C04C3.3 PE=1 SV=2
Length = 352
Score = 430 bits (1105), Expect = e-119, Method: Compositional matrix adjust.
Identities = 209/330 (63%), Positives = 257/330 (77%), Gaps = 1/330 (0%)
Query: 31 SSAVKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTP 90
+ A M VR+ALN A+DEE+ D +VFLMGEEV +Y GAYKISKGL +K+G +RV+DTP
Sbjct: 19 TRAASTMTVRDALNQAMDEEIKRDDRVFLMGEEVAQYDGAYKISKGLWKKHGDKRVVDTP 78
Query: 91 ITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRG 150
ITE GF GI VGAA+ GL+P+ EFMTFNFSMQAID IINSAAK+ YMS+G++ VPIVFRG
Sbjct: 79 ITEMGFAGIAVGAAFAGLRPICEFMTFNFSMQAIDQIINSAAKTYYMSAGRVPVPIVFRG 138
Query: 151 PNGAAAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLY 210
PNGAAAGV AQHS ++AWYA PGLKV+ PYS+EDA+GLLKAAIRD +PVVFLENE+LY
Sbjct: 139 PNGAAAGVAAQHSQDFSAWYAHCPGLKVVCPYSAEDAKGLLKAAIRDDNPVVFLENEILY 198
Query: 211 GESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVI 270
G+SFPV EVL F +PIGKAKIER G VTI ++S+ V SL+AA+ L G+SAEVI
Sbjct: 199 GQSFPVGDEVLSDDFVVPIGKAKIERAGDHVTIVSYSRGVEFSLEAAKQLEAIGVSAEVI 258
Query: 271 NLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIE-ESFGYLDAPVERIA 329
NLRS+RP D +I SV KT+ LV+VE G+P G+G+EI A V+E + F LDAP+ R+
Sbjct: 259 NLRSLRPFDFESIRQSVHKTHHLVSVETGWPFAGIGSEIAAQVMESDVFDQLDAPLLRVT 318
Query: 330 GADVPMPYAANLERMAVPQVEDIVRAAKRA 359
G DVPMPY LE A+P E +V+A K++
Sbjct: 319 GVDVPMPYTQTLEAAALPTAEHVVKAVKKS 348
>sp|Q5RE79|ODPB_PONAB Pyruvate dehydrogenase E1 component subunit beta, mitochondrial
OS=Pongo abelii GN=PDHB PE=2 SV=1
Length = 359
Score = 425 bits (1093), Expect = e-118, Method: Compositional matrix adjust.
Identities = 202/327 (61%), Positives = 254/327 (77%), Gaps = 1/327 (0%)
Query: 33 AVKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPIT 92
A Q+ VR+A+N +DEE+ D KVFL+GEEV +Y GAYK+S+GL +KYG +R++DTPI+
Sbjct: 29 AALQVTVRDAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPIS 88
Query: 93 EAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPN 152
E GF GI VGAA GL+P+ EFMTFNFSMQAID +INSAAK+ YMS G VPIVFRGPN
Sbjct: 89 EMGFAGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYYMSGGLQPVPIVFRGPN 148
Query: 153 GAAAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGE 212
GA+AGV AQHS C+AAWY PGLKV+SP++SEDA+GL+K+AIRD +PVV LENEL+YG
Sbjct: 149 GASAGVAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKSAIRDNNPVVVLENELMYGV 208
Query: 213 SFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINL 272
F E F +PIGKAKIER+G +T+ + S+ VG L+AA +L+KEG+ EVIN+
Sbjct: 209 PFEFPPEAQSKDFLIPIGKAKIERQGTHITVVSHSRPVGHCLEAAAVLSKEGVECEVINM 268
Query: 273 RSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIE-ESFGYLDAPVERIAGA 331
R+IRP+D TI ASV KTN LVTVE G+PQ GVGAEICA ++E +F +LDAP R+ GA
Sbjct: 269 RTIRPMDMETIEASVMKTNHLVTVEGGWPQFGVGAEICARIMEGPAFNFLDAPAVRVTGA 328
Query: 332 DVPMPYAANLERMAVPQVEDIVRAAKR 358
DVPMPYA LE ++PQV+DI+ A K+
Sbjct: 329 DVPMPYAKILEDNSIPQVKDIIFAIKK 355
>sp|P11177|ODPB_HUMAN Pyruvate dehydrogenase E1 component subunit beta, mitochondrial
OS=Homo sapiens GN=PDHB PE=1 SV=3
Length = 359
Score = 425 bits (1092), Expect = e-118, Method: Compositional matrix adjust.
Identities = 202/327 (61%), Positives = 254/327 (77%), Gaps = 1/327 (0%)
Query: 33 AVKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPIT 92
A Q+ VR+A+N +DEE+ D KVFL+GEEV +Y GAYK+S+GL +KYG +R++DTPI+
Sbjct: 29 AALQVTVRDAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPIS 88
Query: 93 EAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPN 152
E GF GI VGAA GL+P+ EFMTFNFSMQAID +INSAAK+ YMS G VPIVFRGPN
Sbjct: 89 EMGFAGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYYMSGGLQPVPIVFRGPN 148
Query: 153 GAAAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGE 212
GA+AGV AQHS C+AAWY PGLKV+SP++SEDA+GL+K+AIRD +PVV LENEL+YG
Sbjct: 149 GASAGVAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKSAIRDNNPVVVLENELMYGV 208
Query: 213 SFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINL 272
F E F +PIGKAKIER+G +T+ + S+ VG L+AA +L+KEG+ EVIN+
Sbjct: 209 PFEFPPEAQSKDFLIPIGKAKIERQGTHITVVSHSRPVGHCLEAAAVLSKEGVECEVINM 268
Query: 273 RSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIE-ESFGYLDAPVERIAGA 331
R+IRP+D TI ASV KTN LVTVE G+PQ GVGAEICA ++E +F +LDAP R+ GA
Sbjct: 269 RTIRPMDMETIEASVMKTNHLVTVEGGWPQFGVGAEICARIMEGPAFNFLDAPAVRVTGA 328
Query: 332 DVPMPYAANLERMAVPQVEDIVRAAKR 358
DVPMPYA LE ++PQV+DI+ A K+
Sbjct: 329 DVPMPYAKILEDNSIPQVKDIIFAIKK 355
>sp|Q4UKQ7|ODPB_RICFE Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia
felis (strain ATCC VR-1525 / URRWXCal2) GN=pdhB PE=3
SV=1
Length = 326
Score = 415 bits (1067), Expect = e-115, Method: Compositional matrix adjust.
Identities = 199/329 (60%), Positives = 254/329 (77%), Gaps = 4/329 (1%)
Query: 36 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAG 95
Q+ VREAL A+ EEM D KVF+MGEEV EYQGAYK+++GLLE++GP+RV+DTPITE G
Sbjct: 2 QITVREALRDAMQEEMIRDDKVFVMGEEVAEYQGAYKVTQGLLEQFGPKRVIDTPITEYG 61
Query: 96 FTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAA 155
F G+ VGAA+ GL+P+VEFMTFNF+MQA DHI+NSAAK++YMS GQ PIVFRGPNGAA
Sbjct: 62 FAGLAVGAAFAGLRPIVEFMTFNFAMQAFDHIVNSAAKTHYMSGGQAKCPIVFRGPNGAA 121
Query: 156 AGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFP 215
+ V AQHS Y A Y+ VPGLKV++PYS+ED +GL+ AIRD +PV+FLENE+LYG SF
Sbjct: 122 SRVAAQHSQNYTACYSHVPGLKVVAPYSAEDHKGLMLTAIRDDNPVIFLENEILYGHSFD 181
Query: 216 VSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSI 275
V E ++ +P G+AKI REG VTI FS V L+L AA +L + I EVI+LR+I
Sbjct: 182 VP-ETIEP---IPFGQAKILREGSSVTIVTFSIQVKLALDAANVLQNDNIDCEVIDLRTI 237
Query: 276 RPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGADVPM 335
+PLD TI SV+KTNRLV VEEG+ GVGA I + V++E+F YLDAP+E ++G DVP+
Sbjct: 238 KPLDTDTIIESVKKTNRLVIVEEGWFFAGVGASIASIVMKEAFDYLDAPIEIVSGKDVPL 297
Query: 336 PYAANLERMAVPQVEDIVRAAKRACYRSV 364
P+A NLE++A+P D++ A K+ CY SV
Sbjct: 298 PFAVNLEKLALPSESDVIEAVKKVCYYSV 326
>sp|Q1RJX3|ODPB_RICBR Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia
bellii (strain RML369-C) GN=pdhB PE=3 SV=1
Length = 325
Score = 415 bits (1067), Expect = e-115, Method: Compositional matrix adjust.
Identities = 197/326 (60%), Positives = 254/326 (77%), Gaps = 4/326 (1%)
Query: 36 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAG 95
Q+ VREAL A+ EEM D KVF+MGEEV EYQGAYK+++GLLE++GP+RV+DTPITE G
Sbjct: 2 QITVREALRDAMQEEMIRDDKVFVMGEEVAEYQGAYKVTQGLLEQFGPKRVIDTPITEYG 61
Query: 96 FTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAA 155
F G+ VGAA+ GL+P+VEFMTFNF+MQA+DHI+NSAAK++YMS GQ+ PIVFRGPNGAA
Sbjct: 62 FAGLAVGAAFAGLRPIVEFMTFNFAMQAMDHIVNSAAKTHYMSGGQVRCPIVFRGPNGAA 121
Query: 156 AGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFP 215
+ V AQHS YAA Y+ +PGLKV++PYS+ED +GL+ AIRD +PV+FLENE+LYG SF
Sbjct: 122 SRVAAQHSQNYAACYSYIPGLKVVAPYSAEDHKGLMITAIRDDNPVIFLENEILYGHSFD 181
Query: 216 VSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSI 275
+S V +P GKAK+ +EG VTI FS V L+L AA IL + I+ EVI+LR+I
Sbjct: 182 ISENVEP----IPFGKAKVLKEGDSVTIVTFSIQVKLALDAANILQSDNINCEVIDLRTI 237
Query: 276 RPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGADVPM 335
+PLD TI SV+KT RLV +EEG+ G+GA I A V++E+F YLDAPVE ++G DVP+
Sbjct: 238 KPLDIDTIIESVKKTGRLVVIEEGWFFAGIGATIAAIVMKEAFDYLDAPVEIVSGKDVPL 297
Query: 336 PYAANLERMAVPQVEDIVRAAKRACY 361
PYA NLE++A+P D++ A K+ CY
Sbjct: 298 PYAVNLEKLALPSEYDVINAVKKVCY 323
>sp|O66113|ODPB_ZYMMO Pyruvate dehydrogenase E1 component subunit beta OS=Zymomonas
mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4)
GN=pdhB PE=3 SV=2
Length = 462
Score = 413 bits (1062), Expect = e-115, Method: Compositional matrix adjust.
Identities = 203/327 (62%), Positives = 251/327 (76%), Gaps = 3/327 (0%)
Query: 36 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAG 95
Q +REAL A+ EEM D +VF+MGEEV EYQGAYK+++GLL+++G RV+DTPI+E G
Sbjct: 138 QQTLREALRDAMAEEMRRDDRVFVMGEEVAEYQGAYKVTQGLLQEFGARRVVDTPISEYG 197
Query: 96 FTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAA 155
F+GIGVGAA GL+PV+EFMT NFSMQAIDHIINSAAK++YMS GQ+ PIVFRGPNGAA
Sbjct: 198 FSGIGVGAAMEGLRPVIEFMTMNFSMQAIDHIINSAAKTHYMSGGQVRCPIVFRGPNGAA 257
Query: 156 AGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFP 215
VGAQH+ + WYA+VPGL VL+PY + DA+GLLKAAIR DPVVFLE ELLYG++F
Sbjct: 258 PRVGAQHTQNFGPWYAAVPGLVVLAPYDAIDAKGLLKAAIRSDDPVVFLECELLYGKTFD 317
Query: 216 VSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSI 275
V +D F LPIGKA+I REGKDVTI ++S V +L AAE LAKEGI AEVI+LR++
Sbjct: 318 VPK--MD-DFVLPIGKARIIREGKDVTIVSYSIGVSFALTAAEALAKEGIDAEVIDLRTL 374
Query: 276 RPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGADVPM 335
RPLD+ TI S+ KTNR+VTVE+G+P + +EI A +EE F LDAPV R+ AD P
Sbjct: 375 RPLDKETILQSLAKTNRIVTVEDGWPVCSISSEIAAIAMEEGFDNLDAPVLRVTNADTPT 434
Query: 336 PYAANLERMAVPQVEDIVRAAKRACYR 362
PYA NLE+ + E I+ A ++ CYR
Sbjct: 435 PYAENLEKKGLVNPEAIIEAVRKVCYR 461
>sp|Q92IS2|ODPB_RICCN Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia
conorii (strain ATCC VR-613 / Malish 7) GN=pdhB PE=3
SV=1
Length = 326
Score = 411 bits (1057), Expect = e-114, Method: Compositional matrix adjust.
Identities = 195/329 (59%), Positives = 251/329 (76%), Gaps = 4/329 (1%)
Query: 36 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAG 95
Q+ VREAL A+ EEM D KVF++GEEV EYQGAYK+++GLLE++GP+RV+DTPITE G
Sbjct: 2 QITVREALRDAMQEEMIRDDKVFVIGEEVAEYQGAYKVTQGLLEQFGPKRVIDTPITEYG 61
Query: 96 FTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAA 155
F G+ VGAA+ GL+P+VEFMTFNF+MQA DHI+NSAAK++YMS GQ+ PIVFRGPNGAA
Sbjct: 62 FAGLAVGAAFAGLRPIVEFMTFNFAMQAFDHIVNSAAKTHYMSGGQVKCPIVFRGPNGAA 121
Query: 156 AGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFP 215
+ V AQHS Y A Y+ +PGLKV++PYS+ED +GL+ AIRD +PVVFLENE+LYG SF
Sbjct: 122 SRVAAQHSQNYTACYSHIPGLKVVAPYSAEDHKGLMLTAIRDDNPVVFLENEILYGHSFD 181
Query: 216 VSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSI 275
V + +P G+AKI REG VTI FS V L+L AA + + I EVI+LR+I
Sbjct: 182 VPKTIEP----IPFGQAKILREGSSVTIVTFSIQVKLALDAANFVQNDNIDCEVIDLRTI 237
Query: 276 RPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGADVPM 335
+PLD TI SV+KTNRLV VEEG+ GVGA I + V++E+F YLDAP+E ++G D+P+
Sbjct: 238 KPLDTETIIESVKKTNRLVVVEEGWFFAGVGASIASIVMKEAFDYLDAPIEIVSGKDLPL 297
Query: 336 PYAANLERMAVPQVEDIVRAAKRACYRSV 364
PYA NLE +A+P D++ A K+ CY S+
Sbjct: 298 PYAVNLETLALPSESDVIEAVKKVCYYSI 326
>sp|Q9ZDR3|ODPB_RICPR Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia
prowazekii (strain Madrid E) GN=pdhB PE=3 SV=1
Length = 326
Score = 406 bits (1044), Expect = e-112, Method: Compositional matrix adjust.
Identities = 192/329 (58%), Positives = 251/329 (76%), Gaps = 4/329 (1%)
Query: 36 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAG 95
Q+ VREAL A+ EEM D KVF++GEEV EYQGAYK+++GLLE++G +RV+DTPITE G
Sbjct: 2 QITVREALRDAMQEEMLRDEKVFVIGEEVAEYQGAYKVTQGLLEQFGSKRVIDTPITEYG 61
Query: 96 FTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAA 155
F G+ VGAA+ GL+P+VEFMTFNF+MQA DHI+NSAAK++YMS GQ+ PIVFRGPNGAA
Sbjct: 62 FAGLAVGAAFAGLRPIVEFMTFNFAMQAFDHIVNSAAKTHYMSGGQVKCPIVFRGPNGAA 121
Query: 156 AGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFP 215
+ V AQHS Y A Y+ +PGLKV++PYS+ED +GL+ AIRD +PV+FLENE+LYG SF
Sbjct: 122 SRVAAQHSQNYTACYSHIPGLKVVAPYSAEDHKGLMLTAIRDDNPVIFLENEILYGHSF- 180
Query: 216 VSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSI 275
+V D +P KAKI +EG +VTI FS V L+L IL + I E+I+LR+I
Sbjct: 181 ---DVPDIIEPIPFSKAKILKEGSNVTIVTFSIQVKLALDVVNILQNDNIDCELIDLRTI 237
Query: 276 RPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGADVPM 335
+PLD +I SV+KTNRLV VEEG+ GVGA I + V++E+F YLDAP+E ++G DVP+
Sbjct: 238 KPLDTDSIIESVKKTNRLVIVEEGWFFAGVGASIASIVMKEAFDYLDAPIEIVSGKDVPL 297
Query: 336 PYAANLERMAVPQVEDIVRAAKRACYRSV 364
PYA NLE++A+P D++ A K+ CY S+
Sbjct: 298 PYAVNLEKLAMPSANDLIEAVKKVCYYSI 326
>sp|Q68XA8|ODPB_RICTY Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia
typhi (strain ATCC VR-144 / Wilmington) GN=pdhB PE=3
SV=1
Length = 326
Score = 405 bits (1042), Expect = e-112, Method: Compositional matrix adjust.
Identities = 191/329 (58%), Positives = 251/329 (76%), Gaps = 4/329 (1%)
Query: 36 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAG 95
Q+ VREAL A+ EEM D KVF++GEEV EYQGAYK+++GLLE++G +RV+DTPITE G
Sbjct: 2 QITVREALRDAMQEEMLRDDKVFVIGEEVAEYQGAYKVTQGLLEQFGSKRVIDTPITEYG 61
Query: 96 FTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAA 155
F G+ VGAA+ GL+P+VEFMTFNF+MQA DHI+NSAAK++YMS GQ+ PIVFRGPNGAA
Sbjct: 62 FAGLAVGAAFAGLRPIVEFMTFNFAMQAFDHIVNSAAKTHYMSGGQVKCPIVFRGPNGAA 121
Query: 156 AGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFP 215
+ V AQHS Y A Y+ +PGLKV++PYS+ED +GL+ AIRD +PV+FLENE+LYG SF
Sbjct: 122 SRVAAQHSQNYTACYSHIPGLKVVAPYSAEDHKGLMLTAIRDDNPVIFLENEILYGHSF- 180
Query: 216 VSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSI 275
+V D +P KAKI +EG +VTI FS V L+L IL + I E+I+LR+I
Sbjct: 181 ---DVPDIIEPIPFSKAKILKEGSNVTIVTFSIQVKLALDVVNILQNDNIDCELIDLRTI 237
Query: 276 RPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGADVPM 335
+PLD + I SV+KTNRLV VEEG+ GVGA I + V++E+F YLDAP+E ++G DVP+
Sbjct: 238 KPLDTNMIIESVKKTNRLVIVEEGWFFAGVGASIASIVMKEAFDYLDAPIEIVSGKDVPL 297
Query: 336 PYAANLERMAVPQVEDIVRAAKRACYRSV 364
PYA NLE++A+P D++ A K+ CY ++
Sbjct: 298 PYAVNLEKLAMPSANDLIEAVKKVCYYTI 326
>sp|P26269|ODPB_ASCSU Pyruvate dehydrogenase E1 component subunit beta, mitochondrial
OS=Ascaris suum PE=1 SV=1
Length = 361
Score = 405 bits (1042), Expect = e-112, Method: Compositional matrix adjust.
Identities = 198/336 (58%), Positives = 243/336 (72%), Gaps = 1/336 (0%)
Query: 25 SNLRNYSSAVKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPE 84
++R +S + VR+ALN+ALDEE+ D +VFL+GEEV +Y GAYKISKGL +KYG
Sbjct: 22 QSVRRLASGTLNVTVRDALNAALDEEIKRDDRVFLIGEEVAQYDGAYKISKGLWKKYGDG 81
Query: 85 RVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISV 144
R+ DTPITE G+ VGAA GL+P+ EFM+ NFSMQ IDHIINSAAK++YMS+G+ V
Sbjct: 82 RIWDTPITEMAIAGLSVGAAMNGLRPICEFMSMNFSMQGIDHIINSAAKAHYMSAGRFHV 141
Query: 145 PIVFRGPNGAAAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFL 204
PIVFRG NGAA GV QHS + AW+ PG+KV+ PY EDARGLLKAA+RD +PV+ L
Sbjct: 142 PIVFRGANGAAVGVAQQHSQDFTAWFMHCPGVKVVVPYDCEDARGLLKAAVRDDNPVICL 201
Query: 205 ENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEG 264
ENE+LYG FPVS E F LP G+AKI+R GKD+TI + S V +SL AA+ LAK G
Sbjct: 202 ENEILYGMKFPVSPEAQSPDFVLPFGQAKIQRPGKDITIVSLSIGVDVSLHAADELAKSG 261
Query: 265 ISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIE-ESFGYLDA 323
I EVINLR +RPLD T+ SV KT LVTVE G+P GVGAEI A V E ++FGYLD
Sbjct: 262 IDCEVINLRCVRPLDFQTVKDSVIKTKHLVTVESGWPNCGVGAEISARVTESDAFGYLDG 321
Query: 324 PVERIAGADVPMPYAANLERMAVPQVEDIVRAAKRA 359
P+ R+ G DVPMPYA LE A+PQ D+V+ K+
Sbjct: 322 PILRVTGVDVPMPYAQPLETAALPQPADVVKMVKKC 357
>sp|Q8MA03|ODPB_CHAGL Pyruvate dehydrogenase E1 component subunit beta
OS=Chaetosphaeridium globosum GN=pdhB PE=3 SV=1
Length = 326
Score = 288 bits (736), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 137/325 (42%), Positives = 215/325 (66%), Gaps = 4/325 (1%)
Query: 36 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAG 95
++++ EAL ALDEEM DP V +MGE+VG Y G+YK++KG EKYG R+LDTPI E
Sbjct: 3 EVLLFEALRDALDEEMQRDPSVLVMGEDVGHYGGSYKVTKGFHEKYGDLRLLDTPIAENS 62
Query: 96 FTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAA 155
FTG+ +GAA GL+P+VE M F + A + I N+A +Y S G +PIV RGP G
Sbjct: 63 FTGMAIGAAMTGLRPIVEGMNMGFLLLAFNQIANNAGMLHYTSGGNFKIPIVIRGPGGVG 122
Query: 156 AGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFP 215
+GA+HS +++ SVPGL++++ + + +GLLK+AIR+ +PV+F E+ LLY
Sbjct: 123 RQLGAEHSQRLESYFQSVPGLQMVACSTPYNGKGLLKSAIRNDNPVIFFEHVLLYN---- 178
Query: 216 VSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSI 275
++ +++ + L + KA++ R G D+TI +S++ L+AA++L +G E+I++ S+
Sbjct: 179 LNENLIEQEYLLCLEKAEVVRPGNDITILTYSRMRHHVLQAAKVLVNKGYDPEIIDILSL 238
Query: 276 RPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGADVPM 335
+PLD TI+ SVRKT++++ VEE G+GA + A+++E+ F YLDAP++ ++ DVP
Sbjct: 239 KPLDMGTISLSVRKTHKVLIVEECMRTGGIGASLRAAILEDLFDYLDAPIQCLSSQDVPT 298
Query: 336 PYAANLERMAVPQVEDIVRAAKRAC 360
PY+ LE + V Q I++A + C
Sbjct: 299 PYSGPLEELTVIQPNQIIQAVEEMC 323
>sp|Q85FX1|ODPB_CYAME Pyruvate dehydrogenase E1 component subunit beta OS=Cyanidioschyzon
merolae GN=pdhB PE=3 SV=1
Length = 326
Score = 283 bits (723), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 141/324 (43%), Positives = 210/324 (64%), Gaps = 4/324 (1%)
Query: 34 VKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITE 93
+ ++ + EAL A+DEEM+ D +VF++GE+VG Y G+YK++K L KYG RVLDTPI E
Sbjct: 2 LHKLFMYEALREAIDEEMARDKRVFVLGEDVGHYGGSYKVTKQLHTKYGDLRVLDTPIAE 61
Query: 94 AGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNG 153
FTG+ +GAA GLKPVVE M +F + A + I N+A +Y S G S+P+V RGP G
Sbjct: 62 NSFTGMAIGAAMTGLKPVVEGMNLSFLLLAFNQISNNAGMLHYTSGGNWSIPLVIRGPGG 121
Query: 154 AAAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGES 213
+ A+HS A++ +VPGLK+++ + +A+GLLKAAIRD +PV+FLE+ LLY
Sbjct: 122 IGKQLSAEHSQRIEAYFQAVPGLKIVACSTPYNAKGLLKAAIRDNNPVLFLEHVLLYN-- 179
Query: 214 FPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLR 273
+ E+ + LP+ KA++ REG DVTI +S+++ ++A + L +G++ EVI+L
Sbjct: 180 --LKQEIPKQEYVLPLDKAQVVREGSDVTIITYSRMLHHVMQAVKQLVAQGMNPEVIDLI 237
Query: 274 SIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGADV 333
S++P+D T+ SV KT++ + VEE G+ AE+ A + +F LDAP+ R++ DV
Sbjct: 238 SLKPIDLETLVTSVSKTHKAIIVEECMQTGGIAAEVMAQIYSHAFDELDAPIRRLSSKDV 297
Query: 334 PMPYAANLERMAVPQVEDIVRAAK 357
P PY LE+ + Q IV A K
Sbjct: 298 PTPYNGYLEQACLVQPTQIVEAVK 321
>sp|Q1XDM1|ODPB_PORYE Pyruvate dehydrogenase E1 component subunit beta OS=Porphyra
yezoensis GN=pdhB PE=3 SV=1
Length = 331
Score = 275 bits (704), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 139/324 (42%), Positives = 209/324 (64%), Gaps = 4/324 (1%)
Query: 34 VKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITE 93
+ ++ + +AL +A DEEM+ DP V ++GE+VG Y G+YK++K L KYG RVLDTPI E
Sbjct: 1 MSKIFMFDALRAATDEEMAKDPTVCVIGEDVGHYGGSYKVTKDLHSKYGDLRVLDTPIAE 60
Query: 94 AGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNG 153
FTG+ +GAA GL+P+VE M +F + A + I N+A Y S G ++P+V RGP G
Sbjct: 61 NSFTGMAIGAAITGLRPIVEGMNMSFLLLAFNQISNNAGMLRYTSGGNFTLPLVIRGPGG 120
Query: 154 AAAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGES 213
+GA+HS A++ ++PGLK+++ + +A+GLLK+AIRD +PVVF E+ LLY
Sbjct: 121 VGRQLGAEHSQRLEAYFQAIPGLKIVACSTPYNAKGLLKSAIRDNNPVVFFEHVLLYN-- 178
Query: 214 FPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLR 273
+ E+ + LP+ K + R+GKD+TI +S++ ++A L KEG EVI+L
Sbjct: 179 --LQEEIPQEEYFLPLNKVEFVRKGKDITILTYSRMRHHVIQALPALLKEGYDPEVIDLI 236
Query: 274 SIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGADV 333
S++PLD +I+ SV+KT++++ VEE G+GAE+ A + E F LDAPV R++ D+
Sbjct: 237 SLKPLDIDSISISVKKTHKVLIVEECMKTAGIGAELIAQINEYLFDELDAPVVRLSSQDI 296
Query: 334 PMPYAANLERMAVPQVEDIVRAAK 357
P PY +LE+ V Q IV + K
Sbjct: 297 PTPYNGSLEQATVIQPSQIVDSVK 320
>sp|P51266|ODPB_PORPU Pyruvate dehydrogenase E1 component subunit beta OS=Porphyra
purpurea GN=pdhB PE=3 SV=1
Length = 331
Score = 273 bits (699), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 136/325 (41%), Positives = 209/325 (64%), Gaps = 4/325 (1%)
Query: 34 VKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITE 93
+ ++ + +AL +A DEEM D V ++GE+VG Y G+YK++K L KYG RVLDTPI E
Sbjct: 1 MSKVFMFDALRAATDEEMEKDLTVCVIGEDVGHYGGSYKVTKDLHSKYGDLRVLDTPIAE 60
Query: 94 AGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNG 153
FTG+ +GAA GL+P+VE M +F + A + I N+A Y S G ++P+V RGP G
Sbjct: 61 NSFTGMAIGAAITGLRPIVEGMNMSFLLLAFNQISNNAGMLRYTSGGNFTLPLVIRGPGG 120
Query: 154 AAAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGES 213
+GA+HS A++ ++PGLK+++ + +A+GLLK+AIRD +PVVF E+ LLY
Sbjct: 121 VGRQLGAEHSQRLEAYFQAIPGLKIVACSTPYNAKGLLKSAIRDNNPVVFFEHVLLYN-- 178
Query: 214 FPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLR 273
+ E+ + + +P+ KA++ R+GKD+TI +S++ +A +L +G EV++L
Sbjct: 179 --LQEEIPEDEYLIPLDKAEVVRKGKDITILTYSRMRHHVTEALPLLLNDGYDPEVLDLI 236
Query: 274 SIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGADV 333
S++PLD +I+ SV+KT+R++ VEE G+GAE+ A + E F LDAPV R++ D+
Sbjct: 237 SLKPLDIDSISVSVKKTHRVLIVEECMKTAGIGAELIAQINEHLFDELDAPVVRLSSQDI 296
Query: 334 PMPYAANLERMAVPQVEDIVRAAKR 358
P PY +LE+ V Q I+ A K
Sbjct: 297 PTPYNGSLEQATVIQPHQIIDAVKN 321
>sp|Q6B8T1|ODPB_GRATL Pyruvate dehydrogenase E1 component subunit beta OS=Gracilaria
tenuistipitata var. liui GN=pdhB PE=3 SV=1
Length = 323
Score = 273 bits (699), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 135/324 (41%), Positives = 207/324 (63%), Gaps = 4/324 (1%)
Query: 34 VKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITE 93
+ ++++ +AL A DEEM D VF++GE+VG Y G+YK++K L KYG RVLDTPI E
Sbjct: 1 MTEVLMFDALREATDEEMQNDSSVFILGEDVGHYGGSYKVTKDLHSKYGDLRVLDTPIAE 60
Query: 94 AGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNG 153
F G+ +GAA GL+P+VE M +F + A + I N+A Y S G +PIV RGP G
Sbjct: 61 NSFMGMAIGAAITGLRPIVEGMNMSFLLLAFNQISNNAGMLRYTSGGNFQIPIVIRGPGG 120
Query: 154 AAAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGES 213
+GA+HS A++ ++PGLK+++ + +A+GLLK+AIRD +PV+F E+ LLY
Sbjct: 121 VGRQLGAEHSQRLEAYFQAIPGLKIVACSTPYNAKGLLKSAIRDNNPVIFFEHVLLYN-- 178
Query: 214 FPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLR 273
+ E+ + + LP+ KA++ R+G DVTI +S++ ++A L +G + EVI+L
Sbjct: 179 --LKDELPNDEYFLPLDKAELVRDGLDVTILTYSRMRHHVMQAVVDLVNDGYNPEVIDLI 236
Query: 274 SIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGADV 333
S++PLD ++I S+ KT++L+ VEE G+GAEI A + + F +LDAP+ R++ D+
Sbjct: 237 SLKPLDITSIAQSLMKTHKLIIVEECMKTGGIGAEIIAQINDNYFDFLDAPIVRLSSQDI 296
Query: 334 PMPYAANLERMAVPQVEDIVRAAK 357
P PY LE+ V + I+ A K
Sbjct: 297 PTPYNGKLEKATVIYPQQIIEAVK 320
>sp|Q1ACL0|ODPB_CHAVU Pyruvate dehydrogenase E1 component subunit beta OS=Chara vulgaris
GN=pdhB PE=3 SV=1
Length = 326
Score = 273 bits (698), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 129/330 (39%), Positives = 210/330 (63%), Gaps = 4/330 (1%)
Query: 34 VKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITE 93
+ + ++ EALN + EE+ DPKVF++GE++G Y G+YK++KGL EKYG R+LDTPI E
Sbjct: 1 MSEKLLYEALNEGIHEEIERDPKVFVIGEDIGHYGGSYKVTKGLFEKYGNLRILDTPIAE 60
Query: 94 AGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNG 153
FTGI +GAA GL+P++E M F + A + I N+A +Y S G + P+V RGP G
Sbjct: 61 NSFTGIAIGAAMTGLRPIIEGMNMGFLLLAFNQIANNAGMLHYTSGGNFTTPLVVRGPGG 120
Query: 154 AAAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGES 213
+GA+HS +++ SVPGL++++ + +A+GL+K+AIR +P++F E+ LLY
Sbjct: 121 VGRQLGAEHSQRLESYFQSVPGLQMVACSTPYNAKGLIKSAIRSQNPIIFFEHVLLYN-- 178
Query: 214 FPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLR 273
+ + + +P+ KA++ R G +TI +S++ L+AA+ L ++G E+I++
Sbjct: 179 --IKENIPQKEYLVPLEKAELVRSGNQITILTYSRMRYHVLQAAKTLIEKGYDPEIIDII 236
Query: 274 SIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGADV 333
S++PLD TI+ S+RKT++++ VEE G+G + ++++E F +LD P+ ++ DV
Sbjct: 237 SLKPLDMGTISTSLRKTHKVLIVEECMKTGGIGTTLKSAILESLFDFLDTPIMSLSSQDV 296
Query: 334 PMPYAANLERMAVPQVEDIVRAAKRACYRS 363
P PY LE + V Q IV AA++ S
Sbjct: 297 PTPYNGFLEDLTVIQPSQIVEAAEKIILYS 326
>sp|Q9C6Z3|ODPB2_ARATH Pyruvate dehydrogenase E1 component subunit beta-2, chloroplastic
OS=Arabidopsis thaliana GN=PDH-E1 BETA PE=2 SV=1
Length = 406
Score = 273 bits (697), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 134/330 (40%), Positives = 209/330 (63%), Gaps = 4/330 (1%)
Query: 31 SSAVKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTP 90
+S ++++ EAL L+EEM DP V +MGE+VG Y G+YK++KGL +K+G RVLDTP
Sbjct: 80 ASTGHELLLFEALQEGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKFGDLRVLDTP 139
Query: 91 ITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRG 150
I E FTG+G+GAA GL+PV+E M F + A + I N+ +Y S GQ ++P+V RG
Sbjct: 140 ICENAFTGMGIGAAMTGLRPVIEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTIPVVIRG 199
Query: 151 PNGAAAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLY 210
P G +GA+HS +++ S+PG+++++ + +A+GL+KAAIR +PV+ E+ LLY
Sbjct: 200 PGGVGRQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLY 259
Query: 211 GESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVI 270
+ ++ D + + +A++ R G+ +TI +S++ ++AA+ L +G EVI
Sbjct: 260 N----LKEKIPDEDYVCNLEEAEMVRPGEHITILTYSRMRYHVMQAAKTLVNKGYDPEVI 315
Query: 271 NLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAG 330
++RS++P D TI SV+KT+R++ VEE G+GA + A++ E YLDAPV ++
Sbjct: 316 DIRSLKPFDLHTIGNSVKKTHRVLIVEECMRTGGIGASLTAAINENFHDYLDAPVMCLSS 375
Query: 331 ADVPMPYAANLERMAVPQVEDIVRAAKRAC 360
DVP PYA LE V Q IV A ++ C
Sbjct: 376 QDVPTPYAGTLEEWTVVQPAQIVTAVEQLC 405
>sp|Q32RS0|ODPB_STAPU Pyruvate dehydrogenase E1 component subunit beta OS=Staurastrum
punctulatum GN=pdhB PE=3 SV=1
Length = 328
Score = 272 bits (695), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 134/329 (40%), Positives = 211/329 (64%), Gaps = 8/329 (2%)
Query: 34 VKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITE 93
+ +M++ EAL L EEM DPKV +MGE+VG Y G+YK++KG EKYG R+LDTPI E
Sbjct: 1 MSEMLLFEALREGLQEEMDRDPKVLVMGEDVGHYGGSYKVTKGFAEKYGDLRLLDTPIAE 60
Query: 94 AGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNG 153
FTG+ +GAA GL+PVVE M F + A + I N+A +Y S ++PIV RGP G
Sbjct: 61 NSFTGMAIGAAMTGLRPVVEGMNMGFLLLAFNQIANNAGMLHYTSGANFTIPIVIRGPGG 120
Query: 154 AAAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYG-- 211
+GA+HS +++ SVPGL++++ + +A+GL+K++IR +PV+ E+ LLY
Sbjct: 121 VGRQLGAEHSQRLESYFQSVPGLQLVACSTPINAKGLIKSSIRSENPVILFEHVLLYNLK 180
Query: 212 ESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVIN 271
E+ P D+ + + + KA+I R G D+TI +S++ L+A + L +G E+I+
Sbjct: 181 ETIP------DNEYLVCLEKAEIVRPGTDITILTYSRMRHHVLQATKSLVYKGYDPEIID 234
Query: 272 LRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGA 331
+ S++P+D TI+ S++KT++++ VEE G+GA + A+++E F +LDAP+ ++
Sbjct: 235 IVSLKPVDLGTISTSIKKTHKVLIVEECMRTGGIGASLRATIMEHLFDFLDAPIMCLSSQ 294
Query: 332 DVPMPYAANLERMAVPQVEDIVRAAKRAC 360
DVP PY+ LE + V Q IV+A ++ C
Sbjct: 295 DVPTPYSGPLEELTVIQPAQIVQAVEQLC 323
>sp|O64688|ODPB3_ARATH Pyruvate dehydrogenase E1 component subunit beta-3, chloroplastic
OS=Arabidopsis thaliana GN=E1-BETA-2 PE=1 SV=1
Length = 406
Score = 271 bits (694), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 136/328 (41%), Positives = 207/328 (63%), Gaps = 8/328 (2%)
Query: 35 KQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEA 94
++++ EAL L+EEM DP V +MGE+VG Y G+YK++KGL +K+G RVLDTPI E
Sbjct: 84 HELLLFEALQEGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKFGDLRVLDTPICEN 143
Query: 95 GFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGA 154
FTG+G+GAA GL+PV+E M F + A + I N+ +Y S GQ ++P+V RGP G
Sbjct: 144 AFTGMGIGAAMTGLRPVIEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTIPVVIRGPGGV 203
Query: 155 AAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYG--E 212
+GA+HS +++ S+PG+++++ + +A+GL+KAAIR +PV+ E+ LLY E
Sbjct: 204 GRQLGAEHSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNLKE 263
Query: 213 SFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINL 272
S P D + + +A++ R G+ +TI +S++ ++AA+ L +G EVI++
Sbjct: 264 SIP------DEEYICNLEEAEMVRPGEHITILTYSRMRYHVMQAAKTLVNKGYDPEVIDI 317
Query: 273 RSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGAD 332
RS++P D TI SV+KT+R++ VEE G+GA + A++ E YLDAPV ++ D
Sbjct: 318 RSLKPFDLYTIGNSVKKTHRVLIVEECMRTGGIGASLTAAINENFHDYLDAPVMCLSSQD 377
Query: 333 VPMPYAANLERMAVPQVEDIVRAAKRAC 360
VP PYA LE V Q IV A ++ C
Sbjct: 378 VPTPYAGTLEEWTVVQPAQIVTAVEQLC 405
>sp|Q10G39|ODPB4_ORYSJ Pyruvate dehydrogenase E1 component subunit beta-4, chloroplastic
OS=Oryza sativa subsp. japonica GN=Os03g0645100 PE=2
SV=1
Length = 400
Score = 269 bits (687), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 138/326 (42%), Positives = 208/326 (63%), Gaps = 4/326 (1%)
Query: 35 KQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEA 94
++++ EAL AL EEM DP V + GE+VG Y G+YK++KGL E +G RVLDTPI E
Sbjct: 78 HEVLLFEALREALIEEMKEDPTVCVFGEDVGHYGGSYKVTKGLAEMFGDLRVLDTPIAEN 137
Query: 95 GFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGA 154
FTG+GVGAA GL+PVVE M F + A + I N+ +Y S GQ +PIV RGP G
Sbjct: 138 SFTGMGVGAAMKGLRPVVEGMNMGFLLLAYNQISNNCGMLHYTSGGQFKIPIVIRGPGGV 197
Query: 155 AAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESF 214
+GA+HS +++ S+PGL++++ + +A+GL+KAAIR +PVV E+ LLY
Sbjct: 198 GRQLGAEHSQRLESYFQSIPGLQMVACSTPYNAKGLMKAAIRSENPVVLFEHVLLYN--- 254
Query: 215 PVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRS 274
+ ++ D + L + +A++ R G+ VTI +S++ ++AA+ L +G EVI++RS
Sbjct: 255 -LKEKIPDEEYVLCLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRS 313
Query: 275 IRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGADVP 334
++P D TI S++KT+R++ VEE G+GA + +++I+ + YLDAP+ ++ DVP
Sbjct: 314 LKPFDLHTIGNSIKKTHRVLIVEECMRTGGIGASLRSAIIDNFWDYLDAPIMCLSSQDVP 373
Query: 335 MPYAANLERMAVPQVEDIVRAAKRAC 360
PYAA LE V Q IV A ++ C
Sbjct: 374 TPYAAPLEDATVVQPAQIVAAVEQIC 399
>sp|Q32RM2|ODPB_ZYGCR Pyruvate dehydrogenase E1 component subunit beta OS=Zygnema
circumcarinatum GN=pdhB PE=3 SV=2
Length = 325
Score = 266 bits (681), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 129/325 (39%), Positives = 208/325 (64%), Gaps = 4/325 (1%)
Query: 36 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAG 95
++++ EAL L EEM DP+V +MGE+VG Y G+YK++KG E+YG R+LDTPI E
Sbjct: 3 EVLLFEALRQGLQEEMDRDPRVMVMGEDVGHYGGSYKVTKGFAERYGDLRLLDTPIAENS 62
Query: 96 FTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAA 155
FTG+ +GAA GL+PVVE M F + A + I N+A +Y S G ++PIV RGP G
Sbjct: 63 FTGMAIGAAMTGLRPVVEGMNMGFLLLAFNQIANNAGMLHYTSGGNFTIPIVIRGPGGVG 122
Query: 156 AGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFP 215
+GA+HS +++ SVPGL++++ + +A+GL+K+AIR +P++ E+ LLY
Sbjct: 123 RQLGAEHSQRLESYFQSVPGLQMVACSTPYNAKGLIKSAIRSDNPIILFEHVLLYN---- 178
Query: 216 VSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSI 275
+ ++ + + + + KA++ R G D+TI +S++ L+A + L +G E+I++ S+
Sbjct: 179 LKEDLAEEEYLVCLEKAEVVRPGNDITILTYSRMRHNVLQATKSLVYKGYDPEIIDIVSL 238
Query: 276 RPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGADVPM 335
+P D TI ASV KT++++ VEE G+GA + A+++E F YLDAP+ ++ DVP
Sbjct: 239 KPFDLGTIGASVCKTHKVLIVEECMRTGGIGATLRAAIMEHFFDYLDAPILCLSSQDVPT 298
Query: 336 PYAANLERMAVPQVEDIVRAAKRAC 360
PY++ LE + V Q I++ ++ C
Sbjct: 299 PYSSPLEELTVIQPNQIIQVVEQLC 323
>sp|Q2QM55|ODPB3_ORYSJ Pyruvate dehydrogenase E1 component subunit beta-3, chloroplastic
OS=Oryza sativa subsp. japonica GN=Os12g0616900 PE=2
SV=1
Length = 391
Score = 266 bits (679), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 136/329 (41%), Positives = 207/329 (62%), Gaps = 4/329 (1%)
Query: 32 SAVKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPI 91
S ++++ EAL AL EEM DP V + GE+VG Y G+YK++KGL E +G RVLDTPI
Sbjct: 66 SGGHEVLLFEALREALIEEMKEDPTVCVFGEDVGHYGGSYKVTKGLAEMFGDLRVLDTPI 125
Query: 92 TEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGP 151
E F G+GVGAA GL+P+VE M F + A + I N+ +Y S GQ +PIV RGP
Sbjct: 126 AENSFAGMGVGAAMKGLRPIVEGMNMGFLLLAYNQISNNCGMLHYTSGGQFKIPIVIRGP 185
Query: 152 NGAAAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYG 211
G +GA+HS +++ S+PGL++++ + +A+GL+KAAIR +PVV E+ LLY
Sbjct: 186 GGVGRQLGAEHSQRLESYFQSIPGLQMVACSTPYNAKGLMKAAIRSENPVVLFEHVLLYN 245
Query: 212 ESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVIN 271
+ ++ D + + +A++ R G+ VTI +S++ ++AA+ L +G EVI+
Sbjct: 246 ----LKEKIPDEEYICCLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVID 301
Query: 272 LRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGA 331
+RS++P D TI S++KT+R++ VEE G+GA + +++I+ + YLDAP+ ++
Sbjct: 302 IRSLKPFDLHTIGNSIKKTHRVLIVEECMRTGGIGASLRSAIIDNFWDYLDAPIMCLSSQ 361
Query: 332 DVPMPYAANLERMAVPQVEDIVRAAKRAC 360
DVP PYAA LE V Q IV A ++ C
Sbjct: 362 DVPTPYAATLEDATVVQPAQIVAAVEQIC 390
>sp|P37941|ODBB_BACSU 2-oxoisovalerate dehydrogenase subunit beta OS=Bacillus subtilis
(strain 168) GN=bfmBAB PE=1 SV=1
Length = 327
Score = 258 bits (659), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 136/321 (42%), Positives = 200/321 (62%), Gaps = 9/321 (2%)
Query: 41 EALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIG 100
+A+N A+ EEM D +VF++GE+VG G +K + GL E++G ERV+DTP+ E+ G+G
Sbjct: 8 DAINLAMKEEMERDSRVFVLGEDVGRKGGVFKATAGLYEQFGEERVMDTPLAESAIAGVG 67
Query: 101 VGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGA 160
+GAA YG++P+ E +F M A++ II+ AAK Y S+ S PIV R P G
Sbjct: 68 IGAAMYGMRPIAEMQFADFIMPAVNQIISEAAKIRYRSNNDWSCPIVVRAPYGGGVHGAL 127
Query: 161 QHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEV 220
HS A +A+ PGLK++ P + DA+GLLKAA+RD DPV+F E++ Y + EV
Sbjct: 128 YHSQSVEAIFANQPGLKIVMPSTPYDAKGLLKAAVRDEDPVLFFEHKRAYR---LIKGEV 184
Query: 221 LDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDR 280
+ LPIGKA ++REG D+T+ + V +L+AAE L K+GISA V++LR++ PLD+
Sbjct: 185 PADDYVLPIGKADVKREGDDITVITYGLCVHFALQAAERLEKDGISAHVVDLRTVYPLDK 244
Query: 281 STINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGADVP-MPYAA 339
I + KT +++ V E + + +E+ A + E LDAP++R+AG D+P MPYA
Sbjct: 245 EAIIEAASKTGKVLLVTEDTKEGSIMSEVAAIISEHCLFDLDAPIKRLAGPDIPAMPYAP 304
Query: 340 NLER--MAVPQVEDIVRAAKR 358
+E+ M P D V AA R
Sbjct: 305 TMEKYFMVNP---DKVEAAMR 322
>sp|Q9TLS3|ODPB_CYACA Pyruvate dehydrogenase E1 component subunit beta OS=Cyanidium
caldarium GN=pdhB PE=3 SV=1
Length = 327
Score = 255 bits (651), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 130/317 (41%), Positives = 198/317 (62%), Gaps = 4/317 (1%)
Query: 37 MMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGF 96
M + EAL +A+DEEM D VF++GE+VG Y G+YK++K L KYG RVLD PI E F
Sbjct: 4 MFLYEALRAAIDEEMGKDSNVFIVGEDVGHYGGSYKVTKDLHVKYGDLRVLDAPIAENSF 63
Query: 97 TGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAA 156
TG+ +GAA GL+P+VE M F + A + I N+ + Y S G ++P+V RGP G
Sbjct: 64 TGMAIGAAMTGLRPIVEGMNMGFMLLAFNQISNNLSMLQYTSGGNFNIPVVIRGPGGIGK 123
Query: 157 GVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPV 216
+ A+HS + + S+PGL++++ ++ +A+GLLK+AI + P++FLE+ LLY +
Sbjct: 124 QLAAEHSQRLESCFQSIPGLQIVACSTAYNAKGLLKSAIIEKKPILFLEHVLLYN----L 179
Query: 217 SAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIR 276
V D + LP+ KA++ R G DVTI +S++ L A E L G E+I+L S++
Sbjct: 180 KGFVPDEEYYLPLDKAEVVRSGSDVTIVTYSRMRYHVLAAVEKLVLNGQDPEIIDLISLK 239
Query: 277 PLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGADVPMP 336
PLD TI+ S++KT+++V VEE G+ AE+ + + + LD+P R++ DVP+P
Sbjct: 240 PLDLHTISKSIKKTHKIVIVEECAQTGGIAAELISLINTYLYDELDSPAVRLSSKDVPIP 299
Query: 337 YAANLERMAVPQVEDIV 353
Y NLE+ + Q + IV
Sbjct: 300 YNGNLEKSTLIQPDQIV 316
>sp|Q5SLR3|ODBB_THET8 2-oxoisovalerate dehydrogenase subunit beta OS=Thermus thermophilus
(strain HB8 / ATCC 27634 / DSM 579) GN=TTHA0230 PE=1
SV=1
Length = 324
Score = 253 bits (646), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 140/325 (43%), Positives = 203/325 (62%), Gaps = 7/325 (2%)
Query: 37 MMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGF 96
M + +ALN ALDEEM+ DP+V ++GE+VG+ G + +++GLL+KYGP+RV+DTP++EA
Sbjct: 4 MTMVQALNRALDEEMAKDPRVVVLGEDVGKRGGVFLVTEGLLQKYGPDRVMDTPLSEAAI 63
Query: 97 TGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAA 156
G +G A +GL+PV E ++ D +++ AK Y S GQ + P+V R P+G
Sbjct: 64 VGAALGMAAHGLRPVAEIQFADYIFPGFDQLVSQVAKLRYRSGGQFTAPLVVRMPSGGGV 123
Query: 157 GVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPV 216
G HS A + GLKV++ + DA+GLLKAAIRD DPVVFLE + LY V
Sbjct: 124 RGGHHHSQSPEAHFVHTAGLKVVAVSTPYDAKGLLKAAIRDEDPVVFLEPKRLYRS---V 180
Query: 217 SAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIR 276
EV + + LPIGKA + REGKD+T+ + ++ L+AA LAK G+SAEV++LR++
Sbjct: 181 KEEVPEEDYTLPIGKAALRREGKDLTLIGYGTVMPEVLQAAAELAKAGVSAEVLDLRTLM 240
Query: 277 PLDRSTINASVRKTNRLVTVEEGFPQHG-VGAEICASVIEESFGYLDAPVERIAGADVPM 335
P D + SV KT R+V V + P+H +E+ A++ E+ L AP R+ G D P
Sbjct: 241 PWDYEAVMNSVAKTGRVVLVSDA-PRHASFVSEVAATIAEDLLDMLLAPPIRVTGFDTPY 299
Query: 336 PYAANLERMAVPQVEDIVRAAKRAC 360
PYA + ++ +P V I+ AAKRA
Sbjct: 300 PYAQD--KLYLPTVTRILNAAKRAL 322
>sp|Q72GU2|ODBB_THET2 2-oxoisovalerate dehydrogenase subunit beta OS=Thermus thermophilus
(strain HB27 / ATCC BAA-163 / DSM 7039) GN=TT_C1756 PE=3
SV=1
Length = 324
Score = 249 bits (637), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 139/325 (42%), Positives = 202/325 (62%), Gaps = 7/325 (2%)
Query: 37 MMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGF 96
M + +ALN ALDEEM+ DP+V ++GE+VG+ G + +++GLL+KYGP+RV+DTP++EA
Sbjct: 4 MTMVQALNRALDEEMAKDPRVVVLGEDVGKRGGVFLVTEGLLQKYGPDRVMDTPLSEAAI 63
Query: 97 TGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAA 156
G +G A +GL+PV E ++ D +++ AK Y S GQ + P+V R P+G
Sbjct: 64 VGAALGMAAHGLRPVAEIQFADYIFPGFDQLVSQVAKLRYRSGGQFTAPLVVRMPSGGGV 123
Query: 157 GVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPV 216
G HS A + GLKV++ + DA+GLLKAAIRD DPVVFLE + LY V
Sbjct: 124 RGGHHHSQSPEAHFVHTAGLKVVAVSTPYDAKGLLKAAIRDEDPVVFLEPKRLYRS---V 180
Query: 217 SAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIR 276
EV + + L IGKA + REGKD+T+ + ++ L+AA LAK G+SAEV++LR++
Sbjct: 181 KEEVPEEDYTLSIGKAALRREGKDLTLIGYGTVMPEVLQAAAELAKAGVSAEVLDLRTLM 240
Query: 277 PLDRSTINASVRKTNRLVTVEEGFPQHG-VGAEICASVIEESFGYLDAPVERIAGADVPM 335
P D + SV KT R+V V + P+H +E+ A++ E+ L AP R+ G D P
Sbjct: 241 PWDYEAVMNSVAKTGRVVLVSDA-PRHASFVSEVAATIAEDLLDMLLAPPIRVTGFDTPY 299
Query: 336 PYAANLERMAVPQVEDIVRAAKRAC 360
PYA + ++ +P V I+ AAKRA
Sbjct: 300 PYAQD--KLYLPTVTRILNAAKRAL 322
>sp|P21874|ODPB_GEOSE Pyruvate dehydrogenase E1 component subunit beta OS=Geobacillus
stearothermophilus GN=pdhB PE=1 SV=2
Length = 325
Score = 247 bits (630), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 135/323 (41%), Positives = 192/323 (59%), Gaps = 4/323 (1%)
Query: 36 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAG 95
QM + +A+ AL E+ DP V + GE+VG G ++ ++GL ++G +RV DTP+ E+G
Sbjct: 3 QMTMVQAITDALRIELKNDPNVLIFGEDVGVNGGVFRATEGLQAEFGEDRVFDTPLAESG 62
Query: 96 FTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAA 155
G+ +G A G +PV E F F + +D I A+ Y + G+ +PI R P G
Sbjct: 63 IGGLAIGLALQGFRPVPEIQFFGFVYEVMDSICGQMARIRYRTGGRYHMPITIRSPFGGG 122
Query: 156 AGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFP 215
HS A PGLKV+ P + DA+GLL +AIRD DPV+FLE+ LY SF
Sbjct: 123 VHTPELHSDSLEGLVAQQPGLKVVIPSTPYDAKGLLISAIRDNDPVIFLEHLKLY-RSF- 180
Query: 216 VSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSI 275
EV + + +PIGKA I+REGKD+TI A+ +V SLKAA L KEGISAEV++LR++
Sbjct: 181 -RQEVPEGEYTIPIGKADIKREGKDITIIAYGAMVHESLKAAAELEKEGISAEVVDLRTV 239
Query: 276 RPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGADVPM 335
+PLD TI SV KT R + V+E Q G+ A + A + E + L+APV R+A D
Sbjct: 240 QPLDIETIIGSVEKTGRAIVVQEAQRQAGIAANVVAEINERAILSLEAPVLRVAAPDTVY 299
Query: 336 PYAANLERMAVPQVEDIVRAAKR 358
P+ A E + +P +D++ AK+
Sbjct: 300 PF-AQAESVWLPNFKDVIETAKK 321
>sp|Q9MUR4|ODPB_MESVI Pyruvate dehydrogenase E1 component subunit beta OS=Mesostigma
viride GN=pdhB PE=3 SV=1
Length = 327
Score = 245 bits (625), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 127/325 (39%), Positives = 200/325 (61%), Gaps = 7/325 (2%)
Query: 37 MMVR---EALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITE 93
M VR EALN A+DEEM+ + KV L+GE++G Y G+YK+++ L KYG RV+DTPI E
Sbjct: 1 MTVRFLFEALNMAIDEEMARNDKVALLGEDIGHYGGSYKVTQNLYAKYGEHRVIDTPIAE 60
Query: 94 AGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNG 153
F G +GAA GL VVE M F + A I N+ + S G +PIV RGP G
Sbjct: 61 NSFVGAAIGAAMTGLVTVVEGMNMGFILLAFSQISNNMGMLSATSGGHYHIPIVLRGPGG 120
Query: 154 AAAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGES 213
+GA+HS ++ SVPGL++++ + +A+GLLK+AIR +P+ FLE+ LLY
Sbjct: 121 VGKQLGAEHSQRLECYFQSVPGLQIVACSTPYNAKGLLKSAIRSKNPIFFLEHVLLYN-- 178
Query: 214 FPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLR 273
+ AEV D+ + LP+ KA+I R+G D+TI +S++ ++A ++L ++G E+I+L
Sbjct: 179 --LKAEVPDNDYVLPLEKAEIVRQGNDITILTYSRMRYNVIQAVKVLVEKGYDPEIIDLI 236
Query: 274 SIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGADV 333
S++P D TI S++KT++++ VEE G+ + + ++E F LD ++ +V
Sbjct: 237 SLKPFDIETIGKSIQKTHKVLIVEESMMTGGISNVLQSLILENFFDDLDNRPMCLSSPNV 296
Query: 334 PMPYAANLERMAVPQVEDIVRAAKR 358
P PY+ LE +++ Q DI+ + ++
Sbjct: 297 PTPYSGPLEEVSIVQTADIIESVEQ 321
>sp|P27746|ACOB_CUPNH Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta
OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM
428 / Stanier 337) GN=acoB PE=1 SV=3
Length = 338
Score = 231 bits (590), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 126/323 (39%), Positives = 196/323 (60%), Gaps = 15/323 (4%)
Query: 35 KQMMVREALNSALDEEMSADPKVFLMGEEV-------GE---YQGAYKISKGLLEKYGPE 84
+++ ++ A+N A+D+EM+ DP V ++GE++ GE + G ++KGL K+G +
Sbjct: 3 RKLSIKLAINEAIDQEMTRDPSVIMLGEDIVGGAGADGEKDAWGGVLGVTKGLYAKHG-D 61
Query: 85 RVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISV 144
R+LDTP++E+ + G +GAA G++P+ E M +F D I N AAK YM G+
Sbjct: 62 RLLDTPLSESAYVGAAIGAAACGMRPIAELMFIDFMGVCFDQIFNQAAKFRYMFGGKAET 121
Query: 145 PIVFRGPNGAAAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFL 204
P+V R GA AQHS + +PGLKV+ P + D +GLL AIRD DPV+F
Sbjct: 122 PVVIRAMVGAGFRAAAQHSQMLTPLFTHIPGLKVVCPSTPYDTKGLLIQAIRDNDPVIFC 181
Query: 205 ENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEG 264
E++ LYG + EV + ++ +P G+A I R+GKDV+I + +V +L+AA LAKEG
Sbjct: 182 EHKNLYG----LEGEVPEGAYAIPFGEANIVRDGKDVSIVTYGLMVHRALEAAATLAKEG 237
Query: 265 ISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFGYLDAP 324
I AE+++LR++ PLD T+ SV T RLV V+E P+ + +I A V +++FG L A
Sbjct: 238 IEAEIVDLRTLSPLDMDTVLESVENTGRLVVVDEASPRCNIATDISAQVAQQAFGALKAG 297
Query: 325 VERIAGADVPMPYAANLERMAVP 347
+E + P+P++ LE + +P
Sbjct: 298 IEMVCPPHTPVPFSPTLEDLYIP 320
>sp|Q5HGZ0|ODPB_STAAC Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus
aureus (strain COL) GN=pdhB PE=3 SV=1
Length = 325
Score = 231 bits (589), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 126/325 (38%), Positives = 188/325 (57%), Gaps = 4/325 (1%)
Query: 36 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAG 95
QM + +A+N AL E+ D V + GE+VG G +++++GL +++G +RV DTP+ E+G
Sbjct: 3 QMTMVQAINDALKTELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESG 62
Query: 96 FTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAA 155
G+ +G A G +PV+E F + D I A++ + S G + P+ RGP G
Sbjct: 63 IGGLAMGLAVEGFRPVMEVQFLGFVFEVFDAIAGQIARTRFRSGGTKTAPVTIRGPFGGG 122
Query: 156 AGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFP 215
H+ A PGLKV+ P DA+GLL ++IR DPVV+LE+ LY SF
Sbjct: 123 VHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLY-RSF- 180
Query: 216 VSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSI 275
EV + + + IGKA +++EG D++I + +V S+KAAE L K+G S EVI+LR++
Sbjct: 181 -REEVPEEEYTIDIGKANVKKEGNDISIITYGAMVQESMKAAEELEKDGYSVEVIDLRTV 239
Query: 276 RPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGADVPM 335
+P+D TI ASV KT R V V+E Q GVGA + A + E + L+AP+ R+A AD
Sbjct: 240 QPIDVDTIVASVEKTGRAVVVQEAQRQAGVGAAVVAELSERAILSLEAPIGRVAAADTIY 299
Query: 336 PYAANLERMAVPQVEDIVRAAKRAC 360
P+ E + +P DI+ AK
Sbjct: 300 PF-TQAENVWLPNKNDIIEKAKETL 323
>sp|A2CI50|ODPB_CHLAT Pyruvate dehydrogenase E1 component subunit beta OS=Chlorokybus
atmophyticus GN=pdhB PE=3 SV=1
Length = 335
Score = 231 bits (588), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 126/315 (40%), Positives = 192/315 (60%), Gaps = 4/315 (1%)
Query: 41 EALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIG 100
EAL A+DEEM + +V L+GE++G Y G+YK+++GL KYG RV+DTPI E F G
Sbjct: 8 EALQKAIDEEMEREKRVVLIGEDIGHYGGSYKVTQGLYGKYGKHRVIDTPIAEYSFVGAA 67
Query: 101 VGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGA 160
VGAA GL PVVE M F + A I N+ S G VP+V RGP G +GA
Sbjct: 68 VGAAATGLIPVVEGMNMAFILLAYSQISNNMGMLCATSGGHFQVPMVLRGPGGIGKQLGA 127
Query: 161 QHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEV 220
+HS +++ SVPGL++++ + +A+GLLK+AIR +P++F+E+ LLY + EV
Sbjct: 128 EHSQRLESYFQSVPGLQIVTCSTPYNAKGLLKSAIRSKNPILFIEHVLLYN----LKGEV 183
Query: 221 LDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDR 280
D+ + LP+ KA++ REG D+T+ +S+ ++A ++L +EG EVI+L S++P D
Sbjct: 184 PDNDYLLPLEKAELVREGSDITVLTYSRQRYNVIQAVKVLVEEGYDPEVIDLISLKPFDM 243
Query: 281 STINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGADVPMPYAAN 340
TI S++KT++++ VEE G+ + + +I+ F LDA ++ +VP PY
Sbjct: 244 ETIGKSIQKTHKVLIVEECMMTGGISNVLQSLIIDNFFDALDAAPLILSSPNVPTPYTGP 303
Query: 341 LERMAVPQVEDIVRA 355
LE V Q DI+ +
Sbjct: 304 LEEATVVQTIDIIES 318
>sp|P0A0A2|ODPB_STAAW Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus
aureus (strain MW2) GN=pdhB PE=3 SV=1
Length = 325
Score = 228 bits (582), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 125/325 (38%), Positives = 187/325 (57%), Gaps = 4/325 (1%)
Query: 36 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAG 95
QM + +A+N AL E+ D V + GE+VG G +++++GL +++G +RV DTP+ E+G
Sbjct: 3 QMTMVQAINDALKTELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESG 62
Query: 96 FTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAA 155
G+ +G A G +PV+E F + D I A++ + S G + P+ R P G
Sbjct: 63 IGGLAMGLAVEGFRPVMEVQFLGFVFEVFDAIAGQIARTRFRSGGTKTAPVTIRSPFGGG 122
Query: 156 AGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFP 215
H+ A PGLKV+ P DA+GLL ++IR DPVV+LE+ LY SF
Sbjct: 123 VHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLY-RSF- 180
Query: 216 VSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSI 275
EV + + + IGKA +++EG D++I + +V S+KAAE L K+G S EVI+LR++
Sbjct: 181 -REEVPEEEYTIDIGKANVKKEGNDISIITYGAMVQESMKAAEELEKDGYSVEVIDLRTV 239
Query: 276 RPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGADVPM 335
+P+D TI ASV KT R V V+E Q GVGA + A + E + L+AP+ R+A AD
Sbjct: 240 QPIDVDTIVASVEKTGRAVVVQEAQRQAGVGAAVVAELSERAILSLEAPIGRVAAADTIY 299
Query: 336 PYAANLERMAVPQVEDIVRAAKRAC 360
P+ E + +P DI+ AK
Sbjct: 300 PF-TQAENVWLPNKNDIIEKAKETL 323
>sp|P0A0A3|ODPB_STAAU Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus
aureus GN=pdhB PE=1 SV=1
Length = 325
Score = 228 bits (582), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 125/325 (38%), Positives = 187/325 (57%), Gaps = 4/325 (1%)
Query: 36 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAG 95
QM + +A+N AL E+ D V + GE+VG G +++++GL +++G +RV DTP+ E+G
Sbjct: 3 QMTMVQAINDALKTELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESG 62
Query: 96 FTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAA 155
G+ +G A G +PV+E F + D I A++ + S G + P+ R P G
Sbjct: 63 IGGLAMGLAVEGFRPVMEVQFLGFVFEVFDAIAGQIARTRFRSGGTKTAPVTIRSPFGGG 122
Query: 156 AGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFP 215
H+ A PGLKV+ P DA+GLL ++IR DPVV+LE+ LY SF
Sbjct: 123 VHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLY-RSF- 180
Query: 216 VSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSI 275
EV + + + IGKA +++EG D++I + +V S+KAAE L K+G S EVI+LR++
Sbjct: 181 -REEVPEEEYTIDIGKANVKKEGNDISIITYGAMVQESMKAAEELEKDGYSVEVIDLRTV 239
Query: 276 RPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGADVPM 335
+P+D TI ASV KT R V V+E Q GVGA + A + E + L+AP+ R+A AD
Sbjct: 240 QPIDVDTIVASVEKTGRAVVVQEAQRQAGVGAAVVAELSERAILSLEAPIGRVAAADTIY 299
Query: 336 PYAANLERMAVPQVEDIVRAAKRAC 360
P+ E + +P DI+ AK
Sbjct: 300 PF-TQAENVWLPNKNDIIEKAKETL 323
>sp|Q6GAC0|ODPB_STAAS Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus
aureus (strain MSSA476) GN=pdhB PE=3 SV=1
Length = 325
Score = 228 bits (582), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 125/325 (38%), Positives = 187/325 (57%), Gaps = 4/325 (1%)
Query: 36 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAG 95
QM + +A+N AL E+ D V + GE+VG G +++++GL +++G +RV DTP+ E+G
Sbjct: 3 QMTMVQAINDALKTELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESG 62
Query: 96 FTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAA 155
G+ +G A G +PV+E F + D I A++ + S G + P+ R P G
Sbjct: 63 IGGLAMGLAVEGFRPVMEVQFLGFVFEVFDAIAGQIARTRFRSGGTKTAPVTIRSPFGGG 122
Query: 156 AGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFP 215
H+ A PGLKV+ P DA+GLL ++IR DPVV+LE+ LY SF
Sbjct: 123 VHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLY-RSF- 180
Query: 216 VSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSI 275
EV + + + IGKA +++EG D++I + +V S+KAAE L K+G S EVI+LR++
Sbjct: 181 -REEVPEEEYTIDIGKANVKKEGNDISIITYGAMVQESMKAAEELEKDGYSVEVIDLRTV 239
Query: 276 RPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGADVPM 335
+P+D TI ASV KT R V V+E Q GVGA + A + E + L+AP+ R+A AD
Sbjct: 240 QPIDVDTIVASVEKTGRAVVVQEAQRQAGVGAAVVAELSERAILSLEAPIGRVAAADTIY 299
Query: 336 PYAANLERMAVPQVEDIVRAAKRAC 360
P+ E + +P DI+ AK
Sbjct: 300 PF-TQAENVWLPNKNDIIEKAKETL 323
>sp|Q6GHZ1|ODPB_STAAR Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus
aureus (strain MRSA252) GN=pdhB PE=3 SV=1
Length = 325
Score = 228 bits (582), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 125/325 (38%), Positives = 187/325 (57%), Gaps = 4/325 (1%)
Query: 36 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAG 95
QM + +A+N AL E+ D V + GE+VG G +++++GL +++G +RV DTP+ E+G
Sbjct: 3 QMTMVQAINDALKTELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESG 62
Query: 96 FTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAA 155
G+ +G A G +PV+E F + D I A++ + S G + P+ R P G
Sbjct: 63 IGGLAMGLAVEGFRPVMEVQFLGFVFEVFDAIAGQIARTRFRSGGTKTAPVTIRSPFGGG 122
Query: 156 AGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFP 215
H+ A PGLKV+ P DA+GLL ++IR DPVV+LE+ LY SF
Sbjct: 123 VHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLY-RSF- 180
Query: 216 VSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSI 275
EV + + + IGKA +++EG D++I + +V S+KAAE L K+G S EVI+LR++
Sbjct: 181 -REEVPEEEYTIDIGKANVKKEGNDISIITYGAMVQESMKAAEELEKDGYSVEVIDLRTV 239
Query: 276 RPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGADVPM 335
+P+D TI ASV KT R V V+E Q GVGA + A + E + L+AP+ R+A AD
Sbjct: 240 QPIDVDTIVASVEKTGRAVVVQEAQRQAGVGAAVVAELSERAILSLEAPIGRVAAADTIY 299
Query: 336 PYAANLERMAVPQVEDIVRAAKRAC 360
P+ E + +P DI+ AK
Sbjct: 300 PF-TQAENVWLPNKNDIIEKAKETL 323
>sp|P99063|ODPB_STAAN Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus
aureus (strain N315) GN=pdhB PE=1 SV=1
Length = 325
Score = 228 bits (582), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 125/325 (38%), Positives = 187/325 (57%), Gaps = 4/325 (1%)
Query: 36 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAG 95
QM + +A+N AL E+ D V + GE+VG G +++++GL +++G +RV DTP+ E+G
Sbjct: 3 QMTMVQAINDALKTELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESG 62
Query: 96 FTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAA 155
G+ +G A G +PV+E F + D I A++ + S G + P+ R P G
Sbjct: 63 IGGLAMGLAVEGFRPVMEVQFLGFVFEVFDAIAGQIARTRFRSGGTKTAPVTIRSPFGGG 122
Query: 156 AGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFP 215
H+ A PGLKV+ P DA+GLL ++IR DPVV+LE+ LY SF
Sbjct: 123 VHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLY-RSF- 180
Query: 216 VSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSI 275
EV + + + IGKA +++EG D++I + +V S+KAAE L K+G S EVI+LR++
Sbjct: 181 -REEVPEEEYTIDIGKANVKKEGNDISIITYGAMVQESMKAAEELEKDGYSVEVIDLRTV 239
Query: 276 RPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGADVPM 335
+P+D TI ASV KT R V V+E Q GVGA + A + E + L+AP+ R+A AD
Sbjct: 240 QPIDVDTIVASVEKTGRAVVVQEAQRQAGVGAAVVAELSERAILSLEAPIGRVAAADTIY 299
Query: 336 PYAANLERMAVPQVEDIVRAAKRAC 360
P+ E + +P DI+ AK
Sbjct: 300 PF-TQAENVWLPNKNDIIEKAKETL 323
>sp|P0A0A1|ODPB_STAAM Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus
aureus (strain Mu50 / ATCC 700699) GN=pdhB PE=1 SV=1
Length = 325
Score = 228 bits (582), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 125/325 (38%), Positives = 187/325 (57%), Gaps = 4/325 (1%)
Query: 36 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAG 95
QM + +A+N AL E+ D V + GE+VG G +++++GL +++G +RV DTP+ E+G
Sbjct: 3 QMTMVQAINDALKTELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESG 62
Query: 96 FTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAA 155
G+ +G A G +PV+E F + D I A++ + S G + P+ R P G
Sbjct: 63 IGGLAMGLAVEGFRPVMEVQFLGFVFEVFDAIAGQIARTRFRSGGTKTAPVTIRSPFGGG 122
Query: 156 AGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFP 215
H+ A PGLKV+ P DA+GLL ++IR DPVV+LE+ LY SF
Sbjct: 123 VHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLY-RSF- 180
Query: 216 VSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSI 275
EV + + + IGKA +++EG D++I + +V S+KAAE L K+G S EVI+LR++
Sbjct: 181 -REEVPEEEYTIDIGKANVKKEGNDISIITYGAMVQESMKAAEELEKDGYSVEVIDLRTV 239
Query: 276 RPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGADVPM 335
+P+D TI ASV KT R V V+E Q GVGA + A + E + L+AP+ R+A AD
Sbjct: 240 QPIDVDTIVASVEKTGRAVVVQEAQRQAGVGAAVVAELSERAILSLEAPIGRVAAADTIY 299
Query: 336 PYAANLERMAVPQVEDIVRAAKRAC 360
P+ E + +P DI+ AK
Sbjct: 300 PF-TQAENVWLPNKNDIIEKAKETL 323
>sp|Q8CPN2|ODPB_STAES Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=pdhB PE=3 SV=1
Length = 325
Score = 226 bits (576), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 122/322 (37%), Positives = 189/322 (58%), Gaps = 4/322 (1%)
Query: 36 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAG 95
QM + +A+N AL E+ D V + GE+VG G +++++GL +++G +RV DTP+ E+G
Sbjct: 3 QMTMVQAINDALKSELKRDEDVLVFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESG 62
Query: 96 FTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAA 155
G+ +G A G +PV+E F + D + A++ + S G P+ R P G
Sbjct: 63 IGGLALGLAVTGFRPVMEIQFLGFVYEVFDEVAGQIARTRFRSGGTKPAPVTIRTPFGGG 122
Query: 156 AGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFP 215
H+ A PGLKV+ P DA+GLL ++I+ DPVV+LE+ LY SF
Sbjct: 123 VHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIQSNDPVVYLEHMKLY-RSF- 180
Query: 216 VSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSI 275
EV + + + IGKA +++EG D+T+ ++ +V SLKAAE L K+G S EVI+LR++
Sbjct: 181 -REEVPEEEYKIDIGKANVKKEGNDITLISYGAMVQESLKAAEELEKDGYSVEVIDLRTV 239
Query: 276 RPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGADVPM 335
+P+D T+ ASV KT R V V+E Q GVGA++ A + E + L+AP+ R+A +D
Sbjct: 240 QPIDIDTLVASVEKTGRAVVVQEAQRQAGVGAQVAAELAERAILSLEAPIARVAASDTIY 299
Query: 336 PYAANLERMAVPQVEDIVRAAK 357
P+ E + +P +DI+ AK
Sbjct: 300 PF-TQAENVWLPNKKDIIEQAK 320
>sp|Q5HQ75|ODPB_STAEQ Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus
epidermidis (strain ATCC 35984 / RP62A) GN=pdhB PE=3
SV=1
Length = 325
Score = 226 bits (576), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 122/322 (37%), Positives = 189/322 (58%), Gaps = 4/322 (1%)
Query: 36 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAG 95
QM + +A+N AL E+ D V + GE+VG G +++++GL +++G +RV DTP+ E+G
Sbjct: 3 QMTMVQAINDALKSELKRDEDVLVFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESG 62
Query: 96 FTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAA 155
G+ +G A G +PV+E F + D + A++ + S G P+ R P G
Sbjct: 63 IGGLALGLAVTGFRPVMEIQFLGFVYEVFDEVAGQIARTRFRSGGTKPAPVTIRTPFGGG 122
Query: 156 AGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFP 215
H+ A PGLKV+ P DA+GLL ++I+ DPVV+LE+ LY SF
Sbjct: 123 VHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIQSNDPVVYLEHMKLY-RSF- 180
Query: 216 VSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSI 275
EV + + + IGKA +++EG D+T+ ++ +V SLKAAE L K+G S EVI+LR++
Sbjct: 181 -REEVPEEEYKIDIGKANVKKEGNDITLISYGAMVQESLKAAEELEKDGYSVEVIDLRTV 239
Query: 276 RPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGADVPM 335
+P+D T+ ASV KT R V V+E Q GVGA++ A + E + L+AP+ R+A +D
Sbjct: 240 QPIDIDTLVASVEKTGRAVVVQEAQRQAGVGAQVAAELAERAILSLEAPIARVAASDTIY 299
Query: 336 PYAANLERMAVPQVEDIVRAAK 357
P+ E + +P +DI+ AK
Sbjct: 300 PF-TQAENVWLPNKKDIIEQAK 320
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.133 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 132,688,446
Number of Sequences: 539616
Number of extensions: 5578787
Number of successful extensions: 16270
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 467
Number of HSP's successfully gapped in prelim test: 131
Number of HSP's that attempted gapping in prelim test: 15068
Number of HSP's gapped (non-prelim): 619
length of query: 370
length of database: 191,569,459
effective HSP length: 119
effective length of query: 251
effective length of database: 127,355,155
effective search space: 31966143905
effective search space used: 31966143905
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)