BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017518
(370 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q920N2|BPL1_MOUSE Biotin--protein ligase OS=Mus musculus GN=Hlcs PE=1 SV=1
Length = 722
Score = 158 bits (400), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 156/304 (51%), Gaps = 23/304 (7%)
Query: 78 SEVSIHLQSEIVKQESFDVELFMNSLATNRFGRLLIWSPRLPSTHDVVSHSFNSNFCELP 137
S + + E E F +E + +L T R G++++++ +T + + E+P
Sbjct: 431 SSMPVVTDPEAFSSEHFSLETYRQNLQTTRLGKVILFAEVTSTTMSL----LDGLMFEMP 486
Query: 138 --VGAVCVADVQFKGRGRSKNAWESPKGC----LMFSFTIQMEDGRVVPLLQYVASLALT 191
+G + +A Q +G+GR NAW SP GC L+ ++ + G+ +P +Q++ SLA+
Sbjct: 487 QEMGLIAIAVRQTQGKGRGPNAWLSPVGCALSTLLVFIPLRSQLGQRIPFVQHLMSLAVV 546
Query: 192 EAINYVCSRDGLPCLDIKIKWPNDLYLNGI-KVGGILCTSTYRTKKFNVSIGIGLNVNNE 250
EA+ + G +++++KWPND+Y + + K+GG+L ST + F + IG G NV N
Sbjct: 547 EAVRSI---PGYEDINLRVKWPNDIYYSDLMKIGGVLVNSTLMGETFYILIGCGFNVTNS 603
Query: 251 EPTTCLNAVL----RKLSDSTYQFRREDVIAAFFNKFETFYDTFINQGFQTLEELYYKTW 306
PT C+N ++ ++ R + +IA E D F +QG + LYYK W
Sbjct: 604 NPTICINDLIEEHNKQHGAGLKPLRADCLIARAVTVLEKLIDRFQDQGPDGVLPLYYKYW 663
Query: 307 LHSGQRVIVQEKNEDQVVENVVTIQGLTSSGYLLAIGDDNQMCELHPDGNSLDFFKGLIR 366
+H GQ+V + Q +I GL SG+L +D + +HPDGNS D + LI
Sbjct: 664 VHGGQQVRLGSTEGPQ-----ASIVGLDDSGFLQVHQEDGGVVTVHPDGNSFDMLRNLIV 718
Query: 367 RKLQ 370
K Q
Sbjct: 719 PKRQ 722
>sp|P50747|BPL1_HUMAN Biotin--protein ligase OS=Homo sapiens GN=HLCS PE=1 SV=1
Length = 726
Score = 153 bits (387), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 154/291 (52%), Gaps = 19/291 (6%)
Query: 87 EIVKQESFDVELFMNSLATNRFGRLLIWSPRLPSTHDVVSHSFNSNFCELPVGAVCVADV 146
E E F++E++ +L T + G++++++ P+T ++ E+ G + +A
Sbjct: 444 EAFSSEHFNLEIYRQNLQTKQLGKVILFAEVTPTTMRLLDGLMFQTPQEM--GLIVIAAR 501
Query: 147 QFKGRGRSKNAWESPKGC----LMFSFTIQMEDGRVVPLLQYVASLALTEAINYVCSRDG 202
Q +G+GR N W SP GC L+ S ++ + G+ +P +Q++ S+A+ EA+ +
Sbjct: 502 QTEGKGRGGNVWLSPVGCALSTLLISIPLRSQLGQRIPFVQHLMSVAVVEAVRSIPEYQD 561
Query: 203 LPCLDIKIKWPNDLYLNGI-KVGGILCTSTYRTKKFNVSIGIGLNVNNEEPTTCLNAVL- 260
+ ++++KWPND+Y + + K+GG+L ST + F + IG G NV N PT C+N ++
Sbjct: 562 I---NLRVKWPNDIYYSDLMKIGGVLVNSTLMGETFYILIGCGFNVTNSNPTICINDLIT 618
Query: 261 ---RKLSDSTYQFRREDVIAAFFNKFETFYDTFINQGFQTLEELYYKTWLHSGQRVIVQE 317
++ R + +IA E F ++G ++ LYY+ W+HSGQ+V +
Sbjct: 619 EYNKQHKAELKPLRADYLIARVVTVLEKLIKEFQDKGPNSVLPLYYRYWVHSGQQVHLGS 678
Query: 318 KNEDQVVENVVTIQGLTSSGYLLAIGDDNQMCELHPDGNSLDFFKGLIRRK 368
+ V+I GL SG+L + ++ +HPDGNS D + LI K
Sbjct: 679 AEGPK-----VSIVGLDDSGFLQVHQEGGEVVTVHPDGNSFDMLRNLILPK 724
>sp|O14353|BPL1_SCHPO Biotin--protein ligase OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=bpl1 PE=3 SV=1
Length = 631
Score = 145 bits (367), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 113/346 (32%), Positives = 175/346 (50%), Gaps = 47/346 (13%)
Query: 57 LAENEIAESLKSNSTLKLPDNSEVSIHLQSE--IVKQE--SFDVELFMNSLATNRFGRLL 112
+ E+++A +L ++ L DN V I E I K+ SFD+EL+ + RFG +
Sbjct: 298 IPEHQLA-NLDISADLSDSDNEIVKIWYGDEEKICKKAKPSFDLELYAKLINGCRFGLPI 356
Query: 113 IWSPRLPSTHDVVSHSFNSNFCE-LPVGAVCVADVQFKGRGRSKNAWESPKGCLMFSFTI 171
I +P + ST ++ N F + G + + Q GRGR +N W SP G L FSF I
Sbjct: 357 IVAPVIRSTQTLLDK--NYRFLDSTNTGFTVLGNYQTAGRGRGQNMWVSPYGTLAFSFII 414
Query: 172 QMEDGRV----VPLLQYVASLALTEAI-NYVCSRDGLPCLDIKIKWPNDLYL----NGI- 221
++ + L QY+ +LA+ I Y + +P IKWPND+Y+ GI
Sbjct: 415 NVDAKNFSTTPIALFQYLMALAVVRGIREYAPGYENIPAF---IKWPNDVYVRVDKGGIN 471
Query: 222 -------KVGGILCTSTYRTKKFNVSIGIGLNVNNEEPTTCLNAVL---RKLSDSTY--Q 269
K+ GI+ TS YR ++ +G G+NV+N PT LN ++ K SD+ +
Sbjct: 472 FQGKQYMKLSGIIVTSNYRKNVLHLVVGCGINVSNLGPTVSLNTLVDEWNKNSDNPRLEK 531
Query: 270 FRREDVIAAFFNKFETFYDTFINQGFQTLEELYYKTWLHSGQRVIVQEKNEDQVVENVVT 329
F E ++A+ N+F+ ++ + +GF + YY+ WLHS Q V + +
Sbjct: 532 FSFEKLLASVLNQFDRYHRLLLEEGFSLILPEYYQYWLHSNQTVNLASGGK-------AI 584
Query: 330 IQGLTSS-GYLLA--IGDDNQ----MCELHPDGNSLDFFKGLIRRK 368
IQG+TS G+LLA + ++N+ + L PDGNS D + LI RK
Sbjct: 585 IQGITSDFGFLLAQLLNENNEPTTKVVHLQPDGNSFDLMRNLITRK 630
>sp|P48445|BPL1_YEAST Biotin--protein ligase OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=BPL1 PE=1 SV=1
Length = 690
Score = 105 bits (263), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 144/334 (43%), Gaps = 64/334 (19%)
Query: 93 SFDVELFMNSL-ATNRFGRLLIWSPRLPSTHDVVSHSFNSNFCELPVGAVC-VADVQFKG 150
+FD++ + L N G LL++ + ST +++++ S +P + V +Q G
Sbjct: 364 NFDMKEYFKYLNVQNTIGSLLLYGEVVTSTSTILNNN-KSLLSSIPESTLLHVGTIQVSG 422
Query: 151 RGRSKNAWESPKGCLMFSFTIQM-------EDGRVVPLLQYVASLALTEAINYVCSRDGL 203
RGR N W +PKG + + M V +QY++ LA +AI + G
Sbjct: 423 RGRGGNTWINPKGVCASTAVVTMPLQSPVTNRNISVVFVQYLSMLAYCKAI--LSYAPGF 480
Query: 204 PCLDIKIKWPNDLY-------------------------LNGI-----KVGGILCTSTYR 233
+ ++IKWPNDLY L I K+ G+L + +
Sbjct: 481 SDIPVRIKWPNDLYALSPTYYKRKNLKLVNTGFEHTKLPLGDIEPAYLKISGLLVNTHFI 540
Query: 234 TKKFNVSIGIGLNVNNEEPTTCLNAVLRKLSDSTYQF--------RREDVIAAFFNKFET 285
K+ + +G G+N+ ++ PTT L + L++ Q + E + A + N E
Sbjct: 541 NNKYCLLLGCGINLTSDGPTTSLQTWIDILNEERQQLHLDLLPAIKAEKLQALYMNNLEV 600
Query: 286 FYDTFINQGFQTLEELYYKTWLHSGQRVIVQEKNEDQVVENVVTIQGLTSS-GYLLA--- 341
FIN G + YY+ WLHS Q V + + Q + I G+T G L+A
Sbjct: 601 ILKQFINYGAAEILPSYYELWLHSNQIVTLPDHGNTQAM-----ITGITEDYGLLIAKEL 655
Query: 342 -IGDDNQMC----ELHPDGNSLDFFKGLIRRKLQ 370
G Q L PDGN+ D FK LI +K+Q
Sbjct: 656 VSGSSTQFTGNVYNLQPDGNTFDIFKSLIAKKVQ 689
>sp|E0U174|BIRA_BACPZ Bifunctional protein BirA OS=Bacillus subtilis subsp. spizizenii
(strain ATCC 23059 / NRRL B-14472 / W23) GN=birA PE=3
SV=1
Length = 325
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 87/205 (42%), Gaps = 11/205 (5%)
Query: 102 SLATNRFGRLLIWSPRLPSTHDVVSHSFNSNFCELPVGAVCVADVQFKGRGRSKNAWESP 161
L T G+ LI+ + ST N+N P G + VAD Q GRGR W S
Sbjct: 76 GLKTEVMGQHLIYQDVISSTQKTAHELANNN---APEGTLVVADKQTAGRGRMSRVWHSQ 132
Query: 162 KGCLMFSFTIQMEDGRVVPLLQYVASLALTEAINYVCSRDGLPCLDIKIKWPNDLYLNGI 221
+G ++ I D +PL Q L L A+ V + + IKWPND+ +NG
Sbjct: 133 EGNGIWMSLILRPD---IPL-QKTPQLTLLAAVAVVQGIEAAAGIQTDIKWPNDILINGK 188
Query: 222 KVGGILCTSTYRTKKF-NVSIGIGLNVNNEE---PTTCLNAVLRKLSDSTYQFRREDVIA 277
K GIL + +V IGIG+NVN + P + S + R VI
Sbjct: 189 KTVGILTEMQAEEDRVRSVIIGIGINVNQQSDDFPDELKDIATSLSQASGEKIDRAGVIQ 248
Query: 278 AFFNKFETFYDTFINQGFQTLEELY 302
FE Y ++ GF ++ L+
Sbjct: 249 HILLCFEKRYRDYMTHGFTPIKLLW 273
>sp|P0CI75|BIRA_BACSU Bifunctional protein BirA OS=Bacillus subtilis (strain 168) GN=birA
PE=1 SV=1
Length = 325
Score = 79.0 bits (193), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 88/205 (42%), Gaps = 11/205 (5%)
Query: 102 SLATNRFGRLLIWSPRLPSTHDVVSHSFNSNFCELPVGAVCVADVQFKGRGRSKNAWESP 161
L T G+ LI+ L ST N+N P G + VAD Q GRGR W S
Sbjct: 76 GLKTEVMGQHLIYHDVLSSTQKTAHELANNN---APEGTLVVADKQTAGRGRMSRVWHSQ 132
Query: 162 KGCLMFSFTIQMEDGRVVPLLQYVASLALTEAINYVCSRDGLPCLDIKIKWPNDLYLNGI 221
+G ++ I D +PL Q L L A+ V + + IKWPND+ +NG
Sbjct: 133 EGNGVWMSLILRPD---IPL-QKTPQLTLLAAVAVVQGIEEAAGIQTDIKWPNDILINGK 188
Query: 222 KVGGILCTSTYRTKKF-NVSIGIGLNVN---NEEPTTCLNAVLRKLSDSTYQFRREDVIA 277
K GIL + +V IGIG+NVN N+ P + + + R VI
Sbjct: 189 KTVGILTEMQAEEDRVRSVIIGIGINVNQQPNDFPDELKDIATSLSQAAGEKIDRAGVIQ 248
Query: 278 AFFNKFETFYDTFINQGFQTLEELY 302
FE Y ++ GF ++ L+
Sbjct: 249 HILLCFEKRYRDYMTHGFTPIKLLW 273
>sp|P29906|BIRA_PARDE Biotin--[acetyl-CoA-carboxylase] synthetase OS=Paracoccus
denitrificans GN=birA PE=3 SV=1
Length = 240
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 93/210 (44%), Gaps = 20/210 (9%)
Query: 140 AVCVADVQFKGRGRSKNAWESPKGCLMFSFTIQMEDGRVVPL-LQYVASLALTEAINYVC 198
A +A QF GRGR W P G + ++ + G + L +VA+LAL +A+ C
Sbjct: 23 AWVLAREQFAGRGRRGREWVMPAGNFAGTLVLRPQGGALAAAQLSFVAALALYDALGLAC 82
Query: 199 SRDGLPCLDIKIKWPNDLYLNGIKVGGILCTSTYRTKKFN-VSIGIGLNVNN-------E 250
P + IKWPND+ LNG KV GIL S+ V++GIG+N+ E
Sbjct: 83 G----PAARLAIKWPNDVLLNGGKVAGILLESSGSGPGVQAVAVGIGVNLAGAPDAGAVE 138
Query: 251 EPTTCLNAVLRKLSDSTYQFRREDVIAAFFNKFETFYDTFINQGFQTLEELYYKTWLHSG 310
T +V + + D++A F +++ DT+ GF + + G
Sbjct: 139 PGATPPVSVQGETGHAVDPEEFLDLLAPAFARWQAQLDTY---GFAPIRNAWLARAARLG 195
Query: 311 QRVIVQEKNEDQVVENVVTIQGLTSSGYLL 340
+ +I + E+ +G+ SG L+
Sbjct: 196 EPIIARTGT----AESHGIFEGIDDSGALI 221
>sp|P46363|BIRA_HAEIN Bifunctional protein BirA OS=Haemophilus influenzae (strain ATCC
51907 / DSM 11121 / KW20 / Rd) GN=birA PE=3 SV=1
Length = 302
Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 114/267 (42%), Gaps = 39/267 (14%)
Query: 102 SLATNRFGRLLIWSPRLPSTHDVVSHSFNSNFCELPVGAVCVADVQFKGRGRSKNAWESP 161
++T F + + P + ST++ + N L G +CVA+ Q GRGR W SP
Sbjct: 62 QISTALFPYSIHYQPIISSTNEWILQ----NILSLKKGDLCVAEYQTAGRGRRGRQWLSP 117
Query: 162 -KGCLMFSFTIQMEDGRVVPLLQYVASLALTEAINYVCSRDGLPCLDIKIKWPNDLYLNG 220
G +MFSF + + + L V LA+ E +N +++KWPND+ +
Sbjct: 118 FAGQIMFSFYWAFDPKKSIEGLSLVIGLAIAEVLN------------VQVKWPNDILFDE 165
Query: 221 IKVGGILC-TSTYRTKKFNVSIGIGLNVN---NEEPTTCLNAVLRKLSDSTYQFRREDVI 276
K+GGIL + ++ N+ IGIG+NV+ E + V D Q +I
Sbjct: 166 RKLGGILVEIANHKNGMLNLVIGIGINVSLSKQTEISQPYAEVCEIDPDVERQTLLPKLI 225
Query: 277 AAFFNKFETFYDTFINQGFQTLEELYYKTWLHSGQRVIVQEKNEDQVVENVVTIQGLTSS 336
+ + F I++ FQ + Y + +S V+ E V+ + QG+
Sbjct: 226 QHLYTRLNIFEQNGIDEEFQQAWQ-SYNAFSNSEINVLT----EQGVISGIE--QGIDER 278
Query: 337 GYLLAIGDDNQMCELHPDGNSLDFFKG 363
GYL +C GN + F G
Sbjct: 279 GYLKV------LC-----GNKIQMFNG 294
>sp|Q5F5C8|BICOA_NEIG1 Bifunctional enzyme BirA/CoaX OS=Neisseria gonorrhoeae (strain ATCC
700825 / FA 1090) GN=birA/coaX PE=3 SV=1
Length = 592
Score = 68.2 bits (165), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 74/173 (42%), Gaps = 40/173 (23%)
Query: 141 VCVADVQFKGRGRSKNAWESPKG-CLMFSFTI-----QMEDGRVVPLLQYVASLALTEAI 194
+CV +Q KGRGR W G CLMFSF Q E G + P VA+LA A+
Sbjct: 112 ICVTHLQSKGRGRQGRKWSHRLGECLMFSFGWAFDRPQYELGSLSP----VAALACRRAL 167
Query: 195 NYVCSRDGLPCLDIKIKWPNDLYLNGIKVGGILCTSTYRTKKFNVSIGIGLNV------- 247
G L+ +IKWPNDL + K+GGIL + K +GIG+N
Sbjct: 168 -------GCLGLETQIKWPNDLVVGRDKLGGILIETVRAGGKTVAVVGIGINFVLPKEVE 220
Query: 248 ---------------NNEEPTTCLNAVLRKLSDSTYQFRREDVIAAFFNKFET 285
N + L +L +L Q+ E+ A F N++ET
Sbjct: 221 NAASVQSLFQTASRRGNADAAVLLETLLAELGAVLEQY-AEEGFAPFLNEYET 272
>sp|Q9JXF1|BICOA_NEIMB Bifunctional enzyme BirA/CoaX OS=Neisseria meningitidis serogroup B
(strain MC58) GN=birA/coaX PE=3 SV=1
Length = 592
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 59/112 (52%), Gaps = 17/112 (15%)
Query: 141 VCVADVQFKGRGRSKNAWESPKG-CLMFSFTI-----QMEDGRVVPLLQYVASLALTEAI 194
+CV +Q KGRGR W G CLMFSF Q E G + P VA++A A+
Sbjct: 112 ICVTHLQSKGRGRQGRKWSHRLGECLMFSFGWVFDRPQYELGSLSP----VAAVACRRAL 167
Query: 195 NYVCSRDGLPCLDIKIKWPNDLYLNGIKVGGILCTSTYRTKKFNVSIGIGLN 246
SR GL D++IKWPNDL + K+GGIL + K +GIG+N
Sbjct: 168 ----SRLGL---DVQIKWPNDLVVGRDKLGGILIETVRTGGKTVAVVGIGIN 212
>sp|P06709|BIRA_ECOLI Bifunctional protein BirA OS=Escherichia coli (strain K12) GN=birA
PE=1 SV=1
Length = 321
Score = 65.5 bits (158), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 83/195 (42%), Gaps = 32/195 (16%)
Query: 123 DVVSHSFNSNFCELPVGAVCVADVQFKGRGRSKNAWESPKGC-LMFSFTIQMEDGRVVPL 181
D + EL G C+A+ Q GRGR W SP G L S ++E G +
Sbjct: 88 DSTNQYLLDRIGELKSGDACIAEYQQAGRGRRGRKWFSPFGANLYLSMFWRLEQGPAAAI 147
Query: 182 -LQYVASLALTEAINYVCSRDGLPCLDIKIKWPNDLYLNGIKVGGILCTSTYRT-KKFNV 239
L V + + E + + + +++KWPNDLYL K+ GIL T +T +
Sbjct: 148 GLSLVIGIVMAEVLRKLGADK------VRVKWPNDLYLQDRKLAGILVELTGKTGDAAQI 201
Query: 240 SIGIGLNVN---------------------NEEPTTCLNAVLRKLSDSTYQFRREDVIAA 278
IG G+N+ N + T ++R+L + F +E +A
Sbjct: 202 VIGAGINMAMRRVEESVVNQGWITLQEAGINLDRNTLAAMLIRELRAALELFEQEG-LAP 260
Query: 279 FFNKFETFYDTFINQ 293
+ +++E D FIN+
Sbjct: 261 YLSRWEKL-DNFINR 274
>sp|Q9JWI7|BICOA_NEIMA Bifunctional enzyme BirA/CoaX OS=Neisseria meningitidis serogroup A
/ serotype 4A (strain Z2491) GN=birA/coaX PE=3 SV=1
Length = 592
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 57/112 (50%), Gaps = 17/112 (15%)
Query: 141 VCVADVQFKGRGRSKNAWESPKG-CLMFSFTI-----QMEDGRVVPLLQYVASLALTEAI 194
+CV +Q KGRGR W G CLMFSF Q E G + P VA++A A+
Sbjct: 112 ICVTHLQSKGRGRQGRKWSHRLGECLMFSFGWVFDRPQYELGSLSP----VAAVACRRAL 167
Query: 195 NYVCSRDGLPCLDIKIKWPNDLYLNGIKVGGILCTSTYRTKKFNVSIGIGLN 246
SR GL +IKWPNDL + K+GGIL + K +GIG+N
Sbjct: 168 ----SRLGL---KTQIKWPNDLVVGRDKLGGILIETVRTGGKTVAVVGIGIN 212
>sp|P37416|BIRA_SALTY Bifunctional protein BirA OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=birA PE=3 SV=2
Length = 320
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 72/177 (40%), Gaps = 10/177 (5%)
Query: 123 DVVSHSFNSNFCELPVGAVCVADVQFKGRGRSKNAWESPKGC-LMFSFTIQMEDGRVVPL 181
D + EL G CVA+ Q GRGR W SP G L S ++E G +
Sbjct: 88 DSTNQYLLDRIGELRSGDACVAEYQQAGRGRRGRKWFSPFGANLYLSMYWRLEQGPAAAI 147
Query: 182 -LQYVASLALTEAINYVCSRDGLPCLDIKIKWPNDLYLNGIKVGGILCTSTYRT-KKFNV 239
L V + + E + + + +++KWPNDLYL K+ GIL T +T +
Sbjct: 148 GLSLVIGIVMAEVLRKLGADK------VRVKWPNDLYLLDRKLAGILVELTGKTGDAAQI 201
Query: 240 SIGIGLNVNNEE-PTTCLNAVLRKLSDSTYQFRREDVIAAFFNKFETFYDTFINQGF 295
IG G+N+ +N L ++ R + A K + F +G
Sbjct: 202 VIGAGINMAMRRVEEDVINQGWITLQEAGITLDRNMLAAKLIYKLRAALELFEQEGL 258
>sp|Q59014|BPL_METJA Putative biotin ligase OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=MJ1619 PE=1 SV=1
Length = 237
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 93/199 (46%), Gaps = 21/199 (10%)
Query: 141 VCVADVQFKGRGRSKNAWESPKGCLMFSFTI--QMEDGRVVPLLQYVASLALTEAINYVC 198
+ +AD Q G+GR W S +G L FS + ++ + +V+ LL + + + + NYV
Sbjct: 28 IVLADKQNNGKGRWGRVWYSDEGGLYFSMVLDSKLYNPKVINLLVPICIIEVLK--NYVD 85
Query: 199 SRDGLPCLDIKIKWPNDLYL----NGIKVGGILCTSTYRTKKFNVSIGIGLNVNNEEPTT 254
GL K+PND+ + N K+GGIL T T + + IGIG+NVNN+
Sbjct: 86 KELGL-------KFPNDIMVKVNDNYKKLGGIL---TELTDDYMI-IGIGINVNNQIRNE 134
Query: 255 CLNAVLRKLSDSTYQFRREDVIAAFFNKFETFYDTFINQGFQTLEEL--YYKTWLHSGQR 312
+ + + + ++++ F FE++ + N+ E L Y K + G++
Sbjct: 135 IREIAISLKEITGKELDKVEILSNFLKTFESYLEKLKNKEIDDYEILKKYKKYSITIGKQ 194
Query: 313 VIVQEKNEDQVVENVVTIQ 331
V + N + + V I
Sbjct: 195 VKILLSNNEIITGKVYDID 213
>sp|Q9BEA0|EGF_CANFA Pro-epidermal growth factor OS=Canis familiaris GN=EGF PE=2 SV=1
Length = 1216
Score = 33.9 bits (76), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 57/141 (40%), Gaps = 7/141 (4%)
Query: 68 SNSTLKLPDNSEVSIHLQSEIVKQESFDVELFMNSLATNRFGRLLIWSPRLPSTHDVVSH 127
SNS + + S+HL + + F + LF N + + + + IW S D+V
Sbjct: 226 SNSHIYSCNYDGGSVHLSKHLTQHNFFAMSLFGNQIFYSTWKKKTIWIANKHSGKDMVRI 285
Query: 128 SFNSNFCELPVGAVCVADVQFKGRGRSKNAWESPKGCLMFSFTIQMEDGRVVPLLQYVAS 187
+ +S+F +P G + V + + S K C + + R Q S
Sbjct: 286 NLDSSF--VPPGGIKVVHPLLQPKAESGTWAPDQKLC-----KWKQGNCRGSTCGQDSKS 338
Query: 188 LALTEAINYVCSRDGLPCLDI 208
+ T A Y S+DG C D+
Sbjct: 339 YSCTCAEGYTLSQDGKYCEDV 359
>sp|Q9TT16|CLCN6_RABIT Chloride transport protein 6 OS=Oryctolagus cuniculus GN=CLCN6 PE=2
SV=1
Length = 869
Score = 32.3 bits (72), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 38/81 (46%), Gaps = 10/81 (12%)
Query: 182 LQYVASLALTEAINYVCSRDGLPCLDIKIKWPNDLYLNGIKVGGILCTSTYRTKKFNV-- 239
L +V +L I V + G+P +IK YLNG+KV GI+ T K F V
Sbjct: 138 LTFVFLASLLVLIEPVAAGSGIP--EIKC------YLNGVKVPGIVRLRTLLCKVFGVLF 189
Query: 240 SIGIGLNVNNEEPTTCLNAVL 260
S+ GL V E P AV+
Sbjct: 190 SVAGGLFVGKEGPMIHSGAVV 210
>sp|O35454|CLCN6_MOUSE Chloride transport protein 6 OS=Mus musculus GN=Clcn6 PE=1 SV=1
Length = 870
Score = 32.0 bits (71), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 38/81 (46%), Gaps = 10/81 (12%)
Query: 182 LQYVASLALTEAINYVCSRDGLPCLDIKIKWPNDLYLNGIKVGGILCTSTYRTKKFNV-- 239
L +V +L I V + G+P +IK YLNG+KV GI+ T K F V
Sbjct: 138 LTFVFLASLLVLIEPVAAGSGIP--EIKC------YLNGVKVPGIVRLRTLLCKVFGVLF 189
Query: 240 SIGIGLNVNNEEPTTCLNAVL 260
S+ GL V E P AV+
Sbjct: 190 SVSGGLFVGKEGPMIHSGAVV 210
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 134,935,335
Number of Sequences: 539616
Number of extensions: 5508794
Number of successful extensions: 13663
Number of sequences better than 100.0: 22
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 13619
Number of HSP's gapped (non-prelim): 23
length of query: 370
length of database: 191,569,459
effective HSP length: 119
effective length of query: 251
effective length of database: 127,355,155
effective search space: 31966143905
effective search space used: 31966143905
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)