Query 017520
Match_columns 370
No_of_seqs 239 out of 2110
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 15:45:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017520.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017520hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2fp8_A Strictosidine synthase; 100.0 1.6E-32 5.3E-37 253.7 30.8 268 76-370 16-312 (322)
2 3sre_A PON1, serum paraoxonase 100.0 3.4E-27 1.2E-31 218.6 29.6 270 69-369 41-355 (355)
3 3dr2_A Exported gluconolactona 100.0 1.6E-25 5.3E-30 205.1 29.7 253 69-369 36-304 (305)
4 3e5z_A Putative gluconolactona 99.9 1.1E-23 3.7E-28 191.6 29.7 250 70-369 20-284 (296)
5 1pjx_A Dfpase, DIISOPROPYLFLUO 99.9 4.2E-23 1.4E-27 188.6 25.9 258 70-370 10-298 (314)
6 3g4e_A Regucalcin; six bladed 99.9 1.4E-22 4.9E-27 184.7 28.9 240 74-361 8-263 (297)
7 2p4o_A Hypothetical protein; p 99.9 9E-21 3.1E-25 173.6 28.7 222 79-361 32-279 (306)
8 1q7f_A NHL, brain tumor CG1071 99.9 2.8E-20 9.6E-25 167.9 30.5 233 75-369 26-278 (286)
9 4hw6_A Hypothetical protein, I 99.9 1.6E-20 5.4E-25 180.1 28.4 237 77-370 137-432 (433)
10 1rwi_B Serine/threonine-protei 99.9 2.4E-20 8.1E-25 166.6 25.7 228 80-370 25-263 (270)
11 2dg1_A DRP35, lactonase; beta 99.9 4.9E-20 1.7E-24 169.9 27.7 243 78-369 44-314 (333)
12 2ghs_A AGR_C_1268P; regucalcin 99.9 2.3E-19 7.8E-24 165.8 29.8 240 69-362 39-294 (326)
13 2qc5_A Streptogramin B lactona 99.9 3E-19 1E-23 161.3 29.3 226 78-369 61-298 (300)
14 2qc5_A Streptogramin B lactona 99.9 5.3E-19 1.8E-23 159.7 30.9 228 78-369 19-258 (300)
15 2z2n_A Virginiamycin B lyase; 99.9 8.4E-19 2.9E-23 158.3 31.2 228 78-369 14-253 (299)
16 3tc9_A Hypothetical hydrolase; 99.9 2.1E-19 7E-24 172.3 26.8 236 77-370 135-429 (430)
17 2z2n_A Virginiamycin B lyase; 99.9 7.2E-19 2.5E-23 158.8 29.1 227 78-369 56-293 (299)
18 3hrp_A Uncharacterized protein 99.8 2.5E-18 8.5E-23 163.8 30.6 235 77-370 129-409 (409)
19 3fvz_A Peptidyl-glycine alpha- 99.8 3.5E-19 1.2E-23 164.6 22.3 240 76-369 21-320 (329)
20 2qe8_A Uncharacterized protein 99.8 7.2E-18 2.5E-22 156.7 24.1 239 70-361 9-311 (343)
21 3a9g_A Putative uncharacterize 99.8 2.8E-17 9.5E-22 153.4 25.5 254 69-368 20-349 (354)
22 4a2l_A BT_4663, two-component 99.8 2.1E-17 7E-22 170.5 26.4 226 81-369 359-612 (795)
23 3dsm_A Uncharacterized protein 99.8 7.2E-17 2.5E-21 149.1 25.6 212 78-335 83-310 (328)
24 3v64_C Agrin; beta propeller, 99.8 9.4E-17 3.2E-21 149.6 24.0 181 78-283 72-265 (349)
25 3v9f_A Two-component system se 99.8 2E-17 6.9E-22 170.2 20.5 225 81-369 365-609 (781)
26 1rwi_B Serine/threonine-protei 99.8 1.3E-16 4.4E-21 142.2 23.2 182 77-283 65-254 (270)
27 3v64_C Agrin; beta propeller, 99.8 6.1E-16 2.1E-20 144.1 28.3 225 81-368 36-272 (349)
28 3v9f_A Two-component system se 99.8 1.6E-16 5.6E-21 163.4 26.0 223 81-359 315-557 (781)
29 1npe_A Nidogen, entactin; glyc 99.8 1.2E-16 4.1E-21 142.9 21.8 198 79-335 36-247 (267)
30 4a2l_A BT_4663, two-component 99.8 1.4E-16 4.7E-21 164.3 25.2 223 81-368 408-656 (795)
31 3v65_B Low-density lipoprotein 99.8 1.7E-16 5.9E-21 149.9 23.4 181 78-283 115-308 (386)
32 1ijq_A LDL receptor, low-densi 99.7 3.5E-16 1.2E-20 143.8 24.0 181 78-283 29-228 (316)
33 3sov_A LRP-6, low-density lipo 99.7 2.3E-16 7.9E-21 145.0 22.0 181 78-283 34-228 (318)
34 3kya_A Putative phosphatase; s 99.7 5.6E-16 1.9E-20 149.0 25.4 237 76-370 136-474 (496)
35 2ism_A Putative oxidoreductase 99.7 3.8E-16 1.3E-20 145.7 23.5 166 69-240 22-223 (352)
36 3v65_B Low-density lipoprotein 99.7 1.5E-15 5.1E-20 143.4 27.5 225 81-368 79-315 (386)
37 1npe_A Nidogen, entactin; glyc 99.7 3.6E-15 1.2E-19 133.3 26.8 216 91-370 3-237 (267)
38 1ijq_A LDL receptor, low-densi 99.7 4.3E-15 1.5E-19 136.4 26.8 218 91-369 3-236 (316)
39 3fvz_A Peptidyl-glycine alpha- 99.7 2.3E-16 7.9E-21 145.6 18.3 188 75-283 87-312 (329)
40 1q7f_A NHL, brain tumor CG1071 99.7 4.6E-16 1.6E-20 140.1 19.3 181 77-282 75-270 (286)
41 3p5b_L Low density lipoprotein 99.7 4.5E-15 1.5E-19 140.8 25.2 222 86-368 80-317 (400)
42 4a0p_A LRP6, LRP-6, low-densit 99.7 2.4E-15 8.3E-20 150.3 24.3 185 73-283 31-227 (628)
43 3p5b_L Low density lipoprotein 99.7 3.2E-15 1.1E-19 141.8 24.0 181 78-283 111-310 (400)
44 3vgz_A Uncharacterized protein 99.7 1.9E-14 6.7E-19 132.7 28.3 234 79-369 41-301 (353)
45 3hxj_A Pyrrolo-quinoline quino 99.7 3.9E-14 1.3E-18 129.7 28.0 210 84-363 103-317 (330)
46 3ott_A Two-component system se 99.7 4.6E-15 1.6E-19 152.1 23.5 216 81-361 375-618 (758)
47 3m0c_C LDL receptor, low-densi 99.7 1.9E-14 6.6E-19 146.8 27.4 226 82-368 388-629 (791)
48 2p9w_A MAL S 1 allergenic prot 99.7 2E-14 7E-19 130.1 23.5 188 79-283 13-255 (334)
49 2fp8_A Strictosidine synthase; 99.7 4.4E-15 1.5E-19 136.5 19.6 176 79-283 80-303 (322)
50 3sov_A LRP-6, low-density lipo 99.7 3.2E-14 1.1E-18 130.7 25.1 218 89-369 4-236 (318)
51 3s94_A LRP-6, low-density lipo 99.7 6.5E-15 2.2E-19 147.0 21.9 182 77-283 38-233 (619)
52 3das_A Putative oxidoreductase 99.7 5.2E-14 1.8E-18 129.7 25.5 206 69-283 23-282 (347)
53 3e5z_A Putative gluconolactona 99.7 3.1E-14 1.1E-18 128.9 23.7 176 79-283 69-278 (296)
54 3ott_A Two-component system se 99.6 6.5E-15 2.2E-19 151.0 20.2 225 81-369 326-584 (758)
55 3dsm_A Uncharacterized protein 99.6 6.6E-14 2.3E-18 129.1 25.1 229 80-370 45-301 (328)
56 3s94_A LRP-6, low-density lipo 99.6 3.6E-14 1.2E-18 141.7 24.8 183 76-283 346-541 (619)
57 3m0c_C LDL receptor, low-densi 99.6 8.8E-14 3E-18 141.9 25.6 181 78-283 423-622 (791)
58 3hrp_A Uncharacterized protein 99.6 6.5E-14 2.2E-18 133.2 23.1 182 78-283 171-400 (409)
59 3hfq_A Uncharacterized protein 99.6 4.8E-13 1.6E-17 123.6 27.7 237 78-369 39-315 (347)
60 4a0p_A LRP6, LRP-6, low-densit 99.6 1.1E-13 3.8E-18 138.3 23.9 182 77-283 338-539 (628)
61 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 1.2E-13 4.1E-18 125.5 20.9 177 79-282 71-288 (314)
62 3dr2_A Exported gluconolactona 99.6 9.1E-14 3.1E-18 126.6 19.4 180 79-283 86-298 (305)
63 1n7d_A LDL receptor, low-densi 99.6 1E-14 3.4E-19 147.8 14.0 181 78-283 405-604 (699)
64 2g8s_A Glucose/sorbosone dehyd 99.6 8.5E-14 2.9E-18 129.8 19.1 164 70-239 10-217 (353)
65 4hw6_A Hypothetical protein, I 99.6 6.7E-14 2.3E-18 134.0 18.6 181 77-283 180-423 (433)
66 1n7d_A LDL receptor, low-densi 99.6 5.9E-14 2E-18 142.2 17.4 224 85-369 373-612 (699)
67 3tc9_A Hypothetical hydrolase; 99.6 1.5E-13 5.1E-18 131.5 18.8 181 77-283 177-420 (430)
68 3hxj_A Pyrrolo-quinoline quino 99.6 4.2E-13 1.4E-17 122.8 20.8 214 82-368 63-281 (330)
69 3g4e_A Regucalcin; six bladed 99.5 3.3E-13 1.1E-17 122.5 18.4 177 79-283 54-263 (297)
70 2dg1_A DRP35, lactonase; beta 99.5 1.6E-12 5.3E-17 119.4 22.7 178 79-283 87-301 (333)
71 3u4y_A Uncharacterized protein 99.5 1.1E-11 3.7E-16 113.4 27.9 233 78-370 40-303 (331)
72 3vgz_A Uncharacterized protein 99.5 2E-11 6.7E-16 112.3 29.8 215 79-360 89-334 (353)
73 3no2_A Uncharacterized protein 99.5 6.8E-12 2.3E-16 112.8 24.8 212 89-361 5-233 (276)
74 3no2_A Uncharacterized protein 99.5 2.2E-11 7.6E-16 109.4 27.4 228 71-347 29-271 (276)
75 3kya_A Putative phosphatase; s 99.5 1.7E-12 5.9E-17 124.8 20.9 181 77-283 184-465 (496)
76 2qe8_A Uncharacterized protein 99.5 1.8E-12 6.1E-17 120.2 17.4 184 76-283 64-311 (343)
77 2ism_A Putative oxidoreductase 99.5 1.5E-11 5.1E-16 114.5 22.9 160 108-283 22-223 (352)
78 3hfq_A Uncharacterized protein 99.4 5.1E-11 1.7E-15 109.9 26.0 184 79-282 86-306 (347)
79 1cru_A Protein (soluble quinop 99.4 5.5E-12 1.9E-16 121.2 17.5 169 69-240 18-248 (454)
80 1jof_A Carboxy-CIS,CIS-muconat 99.4 2.9E-10 9.8E-15 106.0 28.6 242 78-369 39-339 (365)
81 1l0q_A Surface layer protein; 99.4 7E-10 2.4E-14 103.7 31.1 227 79-369 32-273 (391)
82 3u4y_A Uncharacterized protein 99.4 2.8E-10 9.5E-15 103.9 27.5 222 88-369 8-250 (331)
83 2ghs_A AGR_C_1268P; regucalcin 99.4 2.3E-11 7.8E-16 111.9 19.5 175 79-283 90-293 (326)
84 3a9g_A Putative uncharacterize 99.4 2E-10 6.9E-15 106.8 25.1 162 108-283 20-218 (354)
85 1ri6_A Putative isomerase YBHE 99.4 3.5E-10 1.2E-14 103.2 26.3 182 79-281 38-250 (343)
86 3scy_A Hypothetical bacterial 99.4 1.6E-09 5.3E-14 100.4 29.6 234 78-369 49-335 (361)
87 2p4o_A Hypothetical protein; p 99.3 8.1E-11 2.8E-15 107.2 19.9 179 79-283 72-279 (306)
88 3qqz_A Putative uncharacterize 99.3 1.1E-09 3.7E-14 96.5 25.1 190 76-283 24-244 (255)
89 1nir_A Nitrite reductase; hemo 99.3 2.4E-09 8.1E-14 105.4 29.6 228 85-370 144-401 (543)
90 1ri6_A Putative isomerase YBHE 99.3 2.8E-09 9.6E-14 97.2 27.6 172 89-281 4-197 (343)
91 2iwa_A Glutamine cyclotransfer 99.3 3.4E-10 1.2E-14 100.4 19.6 194 118-369 22-235 (266)
92 3das_A Putative oxidoreductase 99.3 4.2E-09 1.4E-13 96.9 27.4 221 109-370 24-291 (347)
93 1pby_B Quinohemoprotein amine 99.3 1.2E-09 4E-14 99.4 23.8 219 80-369 35-308 (337)
94 1l0q_A Surface layer protein; 99.2 1.1E-08 3.9E-13 95.3 29.4 166 90-282 2-178 (391)
95 2iwa_A Glutamine cyclotransfer 99.2 1.6E-09 5.5E-14 96.0 20.3 149 79-248 66-237 (266)
96 3bws_A Protein LP49; two-domai 99.2 1.1E-08 3.9E-13 96.7 26.6 176 80-282 124-323 (433)
97 3bws_A Protein LP49; two-domai 99.2 1.9E-08 6.5E-13 95.1 28.2 246 80-370 171-431 (433)
98 3nol_A Glutamine cyclotransfer 99.2 3.6E-09 1.2E-13 92.8 20.7 145 81-246 89-254 (262)
99 1jof_A Carboxy-CIS,CIS-muconat 99.2 2.4E-08 8.2E-13 92.9 27.0 183 91-281 4-212 (365)
100 2wg3_C Hedgehog-interacting pr 99.2 1.8E-09 6.3E-14 103.6 19.5 167 70-238 6-242 (463)
101 2g8s_A Glucose/sorbosone dehyd 99.1 3.5E-09 1.2E-13 98.4 20.0 163 108-283 9-218 (353)
102 3nok_A Glutaminyl cyclase; bet 99.1 4.3E-09 1.5E-13 92.4 19.0 145 80-245 97-263 (268)
103 3mbr_X Glutamine cyclotransfer 99.1 1.1E-08 3.7E-13 89.0 21.4 146 80-246 66-233 (243)
104 1jmx_B Amine dehydrogenase; ox 99.1 3E-08 1E-12 90.6 25.8 216 80-338 44-337 (349)
105 3scy_A Hypothetical bacterial 99.1 1.4E-08 4.7E-13 94.0 22.8 183 79-282 100-326 (361)
106 1nir_A Nitrite reductase; hemo 99.1 3E-08 1E-12 97.6 25.7 232 80-369 180-456 (543)
107 3nol_A Glutamine cyclotransfer 99.1 2.6E-08 9E-13 87.3 22.1 190 120-369 46-254 (262)
108 1gxr_A ESG1, transducin-like e 99.1 3.8E-07 1.3E-11 82.5 30.7 176 80-282 99-285 (337)
109 1jmx_B Amine dehydrogenase; ox 99.1 3.5E-08 1.2E-12 90.1 23.4 158 83-249 4-176 (349)
110 4ery_A WD repeat-containing pr 99.1 8.8E-07 3E-11 79.9 31.8 181 76-281 21-211 (312)
111 1pby_B Quinohemoprotein amine 99.0 3.8E-08 1.3E-12 89.3 22.2 149 92-249 4-164 (337)
112 3nok_A Glutaminyl cyclase; bet 99.0 6.1E-08 2.1E-12 85.1 21.0 189 120-370 58-265 (268)
113 1qks_A Cytochrome CD1 nitrite 99.0 2.2E-07 7.7E-12 91.6 27.3 226 86-370 163-420 (567)
114 3c75_H MADH, methylamine dehyd 99.0 7.5E-08 2.5E-12 91.3 22.1 241 70-370 112-401 (426)
115 1qks_A Cytochrome CD1 nitrite 99.0 4.4E-07 1.5E-11 89.5 27.9 238 79-369 197-475 (567)
116 2ymu_A WD-40 repeat protein; u 99.0 1.1E-06 3.6E-11 86.3 30.4 176 80-282 305-487 (577)
117 3mbr_X Glutamine cyclotransfer 99.0 1.7E-07 5.8E-12 81.5 21.6 191 119-369 23-233 (243)
118 3ow8_A WD repeat-containing pr 99.0 3.4E-06 1.2E-10 76.8 31.5 179 79-282 81-268 (321)
119 2p9w_A MAL S 1 allergenic prot 98.9 8.7E-08 3E-12 86.8 19.6 159 115-283 11-205 (334)
120 3q7m_A Lipoprotein YFGL, BAMB; 98.9 2.1E-07 7.3E-12 86.6 23.2 213 88-368 102-334 (376)
121 1cru_A Protein (soluble quinop 98.9 2E-08 6.9E-13 96.3 16.3 169 108-284 18-249 (454)
122 3sjl_D Methylamine dehydrogena 98.9 1E-06 3.5E-11 82.2 27.2 241 71-369 73-361 (386)
123 3q7m_A Lipoprotein YFGL, BAMB; 98.9 6.7E-07 2.3E-11 83.2 26.0 210 89-363 143-371 (376)
124 1k8k_C P40, ARP2/3 complex 41 98.9 2.1E-06 7.3E-11 78.8 29.0 230 80-368 10-271 (372)
125 3qqz_A Putative uncharacterize 98.9 7.5E-07 2.5E-11 78.4 24.1 194 117-369 27-251 (255)
126 2ymu_A WD-40 repeat protein; u 98.9 2.4E-06 8.3E-11 83.7 30.2 217 80-361 346-571 (577)
127 2oiz_A Aromatic amine dehydrog 98.9 1.9E-07 6.5E-12 86.9 20.4 74 199-275 286-360 (361)
128 1gxr_A ESG1, transducin-like e 98.9 5.3E-06 1.8E-10 74.8 29.4 178 79-280 52-242 (337)
129 2hqs_A Protein TOLB; TOLB, PAL 98.9 8E-07 2.8E-11 84.2 24.4 202 80-339 180-399 (415)
130 2vdu_B TRNA (guanine-N(7)-)-me 98.8 4.1E-06 1.4E-10 79.9 28.7 176 82-281 8-259 (450)
131 2ojh_A Uncharacterized protein 98.8 1.7E-06 5.8E-11 76.4 24.3 169 90-280 10-191 (297)
132 2mad_H Methylamine dehydrogena 98.8 8.5E-06 2.9E-10 76.0 30.0 241 72-369 62-348 (373)
133 3sre_A PON1, serum paraoxonase 98.8 2.6E-07 8.9E-12 85.3 19.2 143 80-247 113-297 (355)
134 3q6k_A 43.2 kDa salivary prote 98.8 1.3E-06 4.4E-11 81.0 22.2 225 80-360 27-343 (381)
135 2hqs_A Protein TOLB; TOLB, PAL 98.8 4.5E-06 1.5E-10 79.0 26.1 157 99-280 159-328 (415)
136 3zwl_B Eukaryotic translation 98.8 7.2E-06 2.5E-10 74.9 26.9 180 80-281 76-278 (369)
137 2ece_A 462AA long hypothetical 98.8 3.5E-06 1.2E-10 79.5 24.5 188 90-283 96-342 (462)
138 4h5i_A Guanine nucleotide-exch 98.8 1.6E-06 5.6E-11 80.5 22.2 184 81-282 136-332 (365)
139 1got_B GT-beta; complex (GTP-b 98.7 3E-05 1E-09 70.9 30.2 182 76-281 53-245 (340)
140 2ece_A 462AA long hypothetical 98.7 1.3E-06 4.5E-11 82.4 20.9 187 78-280 137-399 (462)
141 3vl1_A 26S proteasome regulato 98.7 8.6E-06 2.9E-10 76.3 27.0 171 85-280 104-309 (420)
142 3zwl_B Eukaryotic translation 98.7 2.1E-05 7E-10 71.8 28.7 182 79-281 33-237 (369)
143 1mda_H Methylamine dehydrogena 98.7 9.1E-07 3.1E-11 82.3 19.5 220 70-335 59-355 (368)
144 2oiz_A Aromatic amine dehydrog 98.7 1.2E-05 4.1E-10 74.6 26.9 87 90-179 16-127 (361)
145 3ow8_A WD repeat-containing pr 98.7 5E-05 1.7E-09 69.0 30.6 177 80-282 34-226 (321)
146 1sq9_A Antiviral protein SKI8; 98.7 8.1E-06 2.8E-10 75.8 25.7 182 80-282 64-311 (397)
147 1got_B GT-beta; complex (GTP-b 98.7 2.8E-05 9.5E-10 71.1 28.6 218 81-361 100-334 (340)
148 2ojh_A Uncharacterized protein 98.7 3.5E-06 1.2E-10 74.2 21.4 176 80-281 43-236 (297)
149 2z3z_A Dipeptidyl aminopeptida 98.7 8.1E-06 2.8E-10 82.3 26.5 196 79-279 82-328 (706)
150 1r5m_A SIR4-interacting protei 98.7 1.7E-05 5.8E-10 73.9 26.7 228 80-369 110-359 (425)
151 4gqb_B Methylosome protein 50; 98.7 1E-05 3.4E-10 74.6 24.6 169 81-275 85-270 (344)
152 1erj_A Transcriptional repress 98.7 4.2E-05 1.4E-09 71.5 29.1 144 82-248 127-287 (393)
153 3c75_H MADH, methylamine dehyd 98.7 7.6E-06 2.6E-10 77.5 24.0 128 90-237 85-246 (426)
154 4g56_B MGC81050 protein; prote 98.7 1.6E-06 5.5E-11 80.3 19.0 179 80-278 44-243 (357)
155 1r5m_A SIR4-interacting protei 98.7 5.2E-06 1.8E-10 77.4 22.5 175 80-281 151-349 (425)
156 1fwx_A Nitrous oxide reductase 98.6 1.8E-06 6.1E-11 84.2 19.5 190 89-283 100-351 (595)
157 4gqb_B Methylosome protein 50; 98.6 1.4E-05 4.8E-10 73.6 24.6 178 81-279 33-232 (344)
158 3b7f_A Glycosyl hydrolase, BNR 98.6 2.1E-06 7.1E-11 80.7 19.1 174 86-282 19-253 (394)
159 3s25_A Hypothetical 7-bladed b 98.6 7.3E-06 2.5E-10 74.1 21.8 208 81-370 57-292 (302)
160 1erj_A Transcriptional repress 98.6 4.6E-05 1.6E-09 71.2 28.1 185 80-289 66-284 (393)
161 2ynn_A Coatomer subunit beta'; 98.6 6.6E-05 2.3E-09 67.4 28.0 147 79-248 14-172 (304)
162 3sjl_D Methylamine dehydrogena 98.6 1.1E-05 3.8E-10 75.1 23.1 195 79-337 137-374 (386)
163 3frx_A Guanine nucleotide-bind 98.6 9.6E-05 3.3E-09 66.9 29.0 181 76-282 15-216 (319)
164 4ery_A WD repeat-containing pr 98.6 0.00021 7E-09 64.1 31.0 148 79-249 66-224 (312)
165 1pgu_A Actin interacting prote 98.6 6.1E-05 2.1E-09 74.0 29.7 227 81-368 67-325 (615)
166 2ecf_A Dipeptidyl peptidase IV 98.6 5.8E-06 2E-10 83.8 22.8 135 80-237 38-227 (741)
167 3mkq_A Coatomer beta'-subunit; 98.6 2.6E-05 9E-10 79.6 27.9 178 79-281 14-205 (814)
168 1vyh_C Platelet-activating fac 98.6 5E-05 1.7E-09 71.5 27.5 148 79-249 109-266 (410)
169 3ei3_B DNA damage-binding prot 98.6 1.5E-05 5.2E-10 73.8 23.3 182 79-281 74-270 (383)
170 4a9v_A PHOX; hydrolase, beta-p 98.6 3.6E-07 1.2E-11 88.2 12.2 76 157-238 472-550 (592)
171 2pm9_A Protein WEB1, protein t 98.6 3.3E-05 1.1E-09 72.0 25.7 233 80-369 69-335 (416)
172 1pgu_A Actin interacting prote 98.6 3.1E-05 1.1E-09 76.1 26.5 184 79-281 19-226 (615)
173 2ecf_A Dipeptidyl peptidase IV 98.6 6E-06 2E-10 83.8 21.7 195 81-280 111-354 (741)
174 3vl1_A 26S proteasome regulato 98.6 9.4E-06 3.2E-10 76.0 21.5 148 80-249 58-213 (420)
175 4aez_A CDC20, WD repeat-contai 98.6 0.0002 7E-09 66.8 30.5 168 84-280 99-278 (401)
176 3iz6_a 40S ribosomal protein R 98.5 0.0002 6.8E-09 66.5 30.1 204 76-282 64-318 (380)
177 1vyh_C Platelet-activating fac 98.5 6.4E-05 2.2E-09 70.7 26.7 176 80-281 152-357 (410)
178 1mda_H Methylamine dehydrogena 98.5 9.4E-06 3.2E-10 75.5 20.3 240 90-370 32-345 (368)
179 1yfq_A Cell cycle arrest prote 98.5 2.3E-05 8E-10 70.9 22.2 177 80-281 13-213 (342)
180 2aq5_A Coronin-1A; WD40 repeat 98.5 2.6E-05 8.9E-10 72.9 22.7 179 80-280 83-285 (402)
181 1sq9_A Antiviral protein SKI8; 98.5 8.1E-05 2.8E-09 68.9 25.8 182 76-280 14-251 (397)
182 2vdu_B TRNA (guanine-N(7)-)-me 98.5 7.9E-05 2.7E-09 70.8 25.9 150 80-249 104-272 (450)
183 3dwl_C Actin-related protein 2 98.5 5.3E-06 1.8E-10 76.6 17.1 148 80-247 13-176 (377)
184 3fm0_A Protein CIAO1; WDR39,SG 98.5 6.6E-05 2.3E-09 68.8 24.2 180 81-281 19-213 (345)
185 4e54_B DNA damage-binding prot 98.5 1.5E-05 5.1E-10 75.6 20.3 182 80-281 121-315 (435)
186 3sfz_A APAF-1, apoptotic pepti 98.5 8.4E-06 2.9E-10 87.6 20.7 180 79-281 1004-1197(1249)
187 3i2n_A WD repeat-containing pr 98.5 3.3E-05 1.1E-09 70.3 21.9 177 80-275 67-272 (357)
188 4g56_B MGC81050 protein; prote 98.5 1.8E-05 6.2E-10 73.1 20.3 173 80-278 96-285 (357)
189 3pe7_A Oligogalacturonate lyas 98.5 6E-05 2.1E-09 69.7 23.9 190 84-279 41-255 (388)
190 3o4h_A Acylamino-acid-releasin 98.5 1.3E-05 4.6E-10 78.9 20.4 175 82-282 68-265 (582)
191 1fwx_A Nitrous oxide reductase 98.5 3.5E-06 1.2E-10 82.2 15.6 183 69-276 187-457 (595)
192 3k26_A Polycomb protein EED; W 98.5 0.00016 5.6E-09 65.7 26.5 154 72-248 12-192 (366)
193 1k8k_C P40, ARP2/3 complex 41 98.5 7.9E-05 2.7E-09 68.2 24.3 183 79-283 53-265 (372)
194 3s25_A Hypothetical 7-bladed b 98.4 3.5E-05 1.2E-09 69.6 21.2 215 78-370 15-254 (302)
195 1tl2_A L10, protein (tachylect 98.4 1.5E-06 5.3E-11 73.7 11.0 112 65-178 27-152 (236)
196 2mad_H Methylamine dehydrogena 98.4 0.00017 5.7E-09 67.2 25.9 135 91-246 34-194 (373)
197 2z3z_A Dipeptidyl aminopeptida 98.4 8.2E-05 2.8E-09 74.9 25.7 161 99-280 235-418 (706)
198 3dm0_A Maltose-binding peripla 98.4 0.00033 1.1E-08 70.5 29.9 181 80-283 432-623 (694)
199 3ei3_B DNA damage-binding prot 98.4 8.6E-05 3E-09 68.6 23.7 147 80-249 120-283 (383)
200 3v7d_B Cell division control p 98.4 0.00027 9.1E-09 67.1 27.4 171 83-281 127-329 (464)
201 4aez_A CDC20, WD repeat-contai 98.4 0.00016 5.3E-09 67.6 25.3 178 81-281 179-368 (401)
202 2pbi_B Guanine nucleotide-bind 98.4 0.0012 4.1E-08 60.5 30.6 180 76-281 62-259 (354)
203 3odt_A Protein DOA1; ubiquitin 98.4 0.00029 1E-08 62.5 25.7 177 79-283 19-205 (313)
204 3jrp_A Fusion protein of prote 98.4 0.00019 6.5E-09 65.6 25.0 183 79-281 12-228 (379)
205 3q6k_A 43.2 kDa salivary prote 98.4 6.8E-05 2.3E-09 69.5 21.6 187 77-282 85-343 (381)
206 3frx_A Guanine nucleotide-bind 98.4 0.001 3.4E-08 60.1 29.3 176 80-282 67-257 (319)
207 1xfd_A DIP, dipeptidyl aminope 98.4 1.1E-05 3.9E-10 81.4 17.9 136 80-237 18-191 (723)
208 1nr0_A Actin interacting prote 98.4 0.00017 5.8E-09 71.6 26.1 182 79-282 19-210 (611)
209 4a11_B DNA excision repair pro 98.3 0.0012 4.1E-08 60.9 29.8 147 80-249 101-277 (408)
210 3pe7_A Oligogalacturonate lyas 98.3 3.4E-05 1.2E-09 71.4 19.0 150 83-249 85-274 (388)
211 3mkq_A Coatomer beta'-subunit; 98.3 0.00011 3.8E-09 74.9 24.5 177 80-281 57-247 (814)
212 3b7f_A Glycosyl hydrolase, BNR 98.3 2.3E-05 8E-10 73.4 17.9 180 80-281 56-298 (394)
213 2xyi_A Probable histone-bindin 98.3 0.00026 8.8E-09 66.9 25.0 181 79-280 129-340 (430)
214 3dm0_A Maltose-binding peripla 98.3 0.00026 8.8E-09 71.3 26.3 177 80-282 384-581 (694)
215 2xzm_R RACK1; ribosome, transl 98.3 0.00048 1.6E-08 62.8 25.9 182 80-283 78-276 (343)
216 3odt_A Protein DOA1; ubiquitin 98.3 0.00044 1.5E-08 61.3 25.2 220 80-369 61-294 (313)
217 2ynn_A Coatomer subunit beta'; 98.3 0.0006 2E-08 61.1 26.1 177 81-282 58-248 (304)
218 1yfq_A Cell cycle arrest prote 98.3 4.8E-05 1.6E-09 68.9 18.8 222 79-361 57-314 (342)
219 2pbi_B Guanine nucleotide-bind 98.3 0.00034 1.2E-08 64.3 24.8 175 81-281 157-345 (354)
220 3sfz_A APAF-1, apoptotic pepti 98.3 0.00058 2E-08 73.3 30.1 180 79-283 616-819 (1249)
221 3lrv_A PRE-mRNA-splicing facto 98.3 0.002 6.8E-08 58.6 30.4 172 88-282 93-280 (343)
222 3k26_A Polycomb protein EED; W 98.3 0.00027 9.2E-09 64.2 23.5 149 80-249 71-261 (366)
223 4h5i_A Guanine nucleotide-exch 98.3 7.1E-05 2.4E-09 69.3 19.1 150 80-248 178-343 (365)
224 3azo_A Aminopeptidase; POP fam 98.3 0.00013 4.6E-09 72.8 22.4 176 88-281 88-312 (662)
225 3f3f_A Nucleoporin SEH1; struc 98.3 0.00048 1.6E-08 61.7 24.2 179 75-274 8-226 (351)
226 2aq5_A Coronin-1A; WD40 repeat 98.2 0.00018 6E-09 67.2 21.8 180 79-278 132-329 (402)
227 1nr0_A Actin interacting prote 98.2 0.0011 3.8E-08 65.7 28.5 178 80-282 61-259 (611)
228 1xfd_A DIP, dipeptidyl aminope 98.2 0.00012 4.1E-09 73.8 21.8 196 80-279 62-323 (723)
229 3dw8_B Serine/threonine-protei 98.2 0.0011 3.8E-08 62.2 26.8 185 80-283 30-306 (447)
230 4a5s_A Dipeptidyl peptidase 4 98.2 0.00026 8.8E-09 72.0 23.8 248 83-369 66-398 (740)
231 3gre_A Serine/threonine-protei 98.2 0.00086 2.9E-08 63.0 25.9 151 79-248 64-245 (437)
232 2j04_A TAU60, YPL007P, hypothe 98.2 0.00088 3E-08 65.3 25.5 180 79-281 16-243 (588)
233 2ad6_A Methanol dehydrogenase 98.2 0.0012 4.2E-08 64.9 27.0 42 318-361 485-527 (571)
234 3fm0_A Protein CIAO1; WDR39,SG 98.2 0.00035 1.2E-08 63.9 21.4 144 118-280 18-168 (345)
235 3i2n_A WD repeat-containing pr 98.2 0.00046 1.6E-08 62.5 22.1 175 79-280 19-230 (357)
236 3o4h_A Acylamino-acid-releasin 98.2 7.4E-05 2.5E-09 73.5 17.8 168 81-281 112-300 (582)
237 2ad6_A Methanol dehydrogenase 98.1 0.0015 5E-08 64.4 26.8 62 84-147 111-186 (571)
238 3dwl_C Actin-related protein 2 98.1 2.7E-05 9.4E-10 71.7 13.6 184 80-283 57-272 (377)
239 2xbg_A YCF48-like protein; pho 98.1 0.0013 4.3E-08 59.9 24.4 175 82-283 83-270 (327)
240 1kb0_A Quinohemoprotein alcoho 98.1 0.0023 7.9E-08 64.3 28.2 39 318-358 498-537 (677)
241 3azo_A Aminopeptidase; POP fam 98.1 0.00017 5.9E-09 71.9 19.8 193 80-281 25-260 (662)
242 3jrp_A Fusion protein of prote 98.1 0.0006 2.1E-08 62.2 21.8 184 80-284 57-279 (379)
243 3dw8_B Serine/threonine-protei 98.1 0.0025 8.6E-08 59.7 26.6 149 80-248 95-315 (447)
244 2xzm_R RACK1; ribosome, transl 98.1 0.0053 1.8E-07 55.8 27.9 175 80-281 23-232 (343)
245 3v7d_B Cell division control p 98.1 0.0072 2.4E-07 57.1 29.7 149 79-248 163-341 (464)
246 2pm9_A Protein WEB1, protein t 98.1 0.00015 5.1E-09 67.5 17.5 180 80-281 14-234 (416)
247 3iz6_a 40S ribosomal protein R 98.1 0.00047 1.6E-08 63.9 20.7 150 82-249 209-376 (380)
248 4aow_A Guanine nucleotide-bind 98.1 0.0032 1.1E-07 56.4 25.8 181 76-281 36-234 (340)
249 1k32_A Tricorn protease; prote 98.1 0.00032 1.1E-08 74.2 21.8 143 83-239 342-492 (1045)
250 3jro_A Fusion protein of prote 98.1 0.00044 1.5E-08 70.5 21.8 182 79-280 10-225 (753)
251 3amr_A 3-phytase; beta-propell 98.1 0.00073 2.5E-08 61.6 20.7 176 87-283 37-252 (355)
252 2hes_X YDR267CP; beta-propelle 98.0 0.0029 9.9E-08 57.3 25.0 148 80-248 16-184 (330)
253 3mmy_A MRNA export factor; mRN 98.0 0.0015 5.3E-08 59.1 23.1 93 79-177 40-146 (368)
254 3lrv_A PRE-mRNA-splicing facto 98.0 0.0016 5.4E-08 59.3 23.0 174 91-289 50-241 (343)
255 1k32_A Tricorn protease; prote 98.0 0.0003 1E-08 74.4 20.6 171 82-280 248-438 (1045)
256 2xbg_A YCF48-like protein; pho 98.0 0.0033 1.1E-07 57.1 24.7 179 80-283 37-225 (327)
257 3c5m_A Oligogalacturonate lyas 98.0 0.00049 1.7E-08 63.4 19.5 195 81-281 38-257 (396)
258 2hz6_A Endoplasmic reticulum t 98.0 1.9E-05 6.6E-10 73.4 9.7 139 85-249 6-150 (369)
259 1kb0_A Quinohemoprotein alcoho 98.0 0.002 6.9E-08 64.8 24.9 109 89-212 77-203 (677)
260 2hes_X YDR267CP; beta-propelle 98.0 0.0038 1.3E-07 56.4 24.6 149 80-248 60-230 (330)
261 4a11_B DNA excision repair pro 97.9 0.0022 7.6E-08 59.0 22.7 148 79-249 44-219 (408)
262 2xdw_A Prolyl endopeptidase; a 97.9 0.0033 1.1E-07 63.5 25.4 182 83-281 129-354 (710)
263 3mmy_A MRNA export factor; mRN 97.9 0.0011 3.7E-08 60.1 20.0 198 80-281 88-334 (368)
264 3amr_A 3-phytase; beta-propell 97.9 0.0014 4.7E-08 59.9 19.7 131 200-369 102-261 (355)
265 1z68_A Fibroblast activation p 97.9 0.00015 5E-09 73.3 14.9 129 81-237 18-187 (719)
266 1z68_A Fibroblast activation p 97.9 0.00027 9.3E-09 71.3 16.8 190 81-278 62-328 (719)
267 4aow_A Guanine nucleotide-bind 97.9 0.011 3.9E-07 52.7 29.2 181 79-283 87-277 (340)
268 2xyi_A Probable histone-bindin 97.9 0.0014 4.6E-08 61.9 20.2 181 79-282 182-399 (430)
269 1w6s_A Methanol dehydrogenase 97.9 0.01 3.6E-07 58.6 27.2 45 315-361 491-536 (599)
270 2wg3_C Hedgehog-interacting pr 97.9 0.0015 5.2E-08 62.4 19.9 134 108-248 5-186 (463)
271 2ovr_B FBW7, F-BOX/WD repeat p 97.8 0.014 4.8E-07 54.9 26.7 138 83-249 164-309 (445)
272 2oaj_A Protein SNI1; WD40 repe 97.8 0.0016 5.6E-08 67.7 21.2 176 79-282 18-231 (902)
273 2j04_B YDR362CP, TAU91; beta p 97.8 0.0012 4.2E-08 64.2 18.7 147 81-248 269-428 (524)
274 2ovr_B FBW7, F-BOX/WD repeat p 97.8 0.028 9.7E-07 52.7 28.8 223 82-370 203-441 (445)
275 3f3f_A Nucleoporin SEH1; struc 97.7 0.023 8E-07 50.4 24.5 113 117-249 12-144 (351)
276 1flg_A Protein (quinoprotein e 97.7 0.031 1.1E-06 55.0 27.2 42 318-361 507-549 (582)
277 2gop_A Trilobed protease; beta 97.7 0.0068 2.3E-07 54.7 20.7 172 80-281 60-280 (347)
278 1yiq_A Quinohemoprotein alcoho 97.7 0.013 4.5E-07 58.9 24.4 42 317-360 495-537 (689)
279 1w6s_A Methanol dehydrogenase 97.7 0.031 1.1E-06 55.1 26.6 64 83-147 110-192 (599)
280 2oaj_A Protein SNI1; WD40 repe 97.6 0.0036 1.2E-07 65.1 20.5 149 81-249 61-243 (902)
281 2j04_A TAU60, YPL007P, hypothe 97.6 0.0081 2.8E-07 58.5 21.0 146 80-249 87-255 (588)
282 3bg1_A Protein SEC13 homolog; 97.6 0.022 7.6E-07 50.9 23.0 149 80-248 15-198 (316)
283 3jro_A Fusion protein of prote 97.6 0.0055 1.9E-07 62.3 20.8 188 80-288 55-281 (753)
284 3gre_A Serine/threonine-protei 97.6 0.013 4.6E-07 54.7 22.1 149 80-249 113-293 (437)
285 1p22_A F-BOX/WD-repeat protein 97.6 0.02 6.7E-07 53.8 23.2 143 81-249 176-326 (435)
286 3bg1_A Protein SEC13 homolog; 97.6 0.012 4.2E-07 52.7 20.5 181 80-280 59-280 (316)
287 2pm7_B Protein transport prote 97.6 0.038 1.3E-06 48.9 28.2 174 80-274 11-216 (297)
288 1p22_A F-BOX/WD-repeat protein 97.5 0.038 1.3E-06 51.7 24.6 205 90-367 144-361 (435)
289 4a5s_A Dipeptidyl peptidase 4 97.5 0.0077 2.6E-07 61.0 20.8 130 82-237 20-189 (740)
290 1tl2_A L10, protein (tachylect 97.5 0.0014 4.9E-08 55.6 12.5 135 119-280 43-199 (236)
291 1yiq_A Quinohemoprotein alcoho 97.5 0.028 9.7E-07 56.5 24.3 109 89-212 70-196 (689)
292 2pm7_B Protein transport prote 97.5 0.023 8E-07 50.3 21.3 179 81-281 56-273 (297)
293 1kv9_A Type II quinohemoprotei 97.5 0.014 4.6E-07 58.6 21.2 110 89-213 66-192 (668)
294 4e54_B DNA damage-binding prot 97.4 0.012 4.1E-07 55.3 19.2 136 116-275 119-263 (435)
295 1kv9_A Type II quinohemoprotei 97.4 0.085 2.9E-06 52.8 26.3 42 318-361 479-521 (668)
296 1yr2_A Prolyl oligopeptidase; 97.4 0.039 1.3E-06 55.9 23.6 179 83-280 167-380 (741)
297 3c5m_A Oligogalacturonate lyas 97.4 0.023 7.8E-07 52.0 19.9 134 98-250 167-331 (396)
298 2gop_A Trilobed protease; beta 97.3 0.02 6.7E-07 51.6 18.9 134 98-245 42-206 (347)
299 4gga_A P55CDC, cell division c 97.3 0.049 1.7E-06 50.7 21.7 82 197-281 299-383 (420)
300 3iuj_A Prolyl endopeptidase; h 97.2 0.072 2.5E-06 53.5 23.6 171 83-275 133-338 (693)
301 3vu4_A KMHSV2; beta-propeller 97.2 0.0098 3.4E-07 54.4 15.6 132 96-248 156-336 (355)
302 2bkl_A Prolyl endopeptidase; m 97.2 0.032 1.1E-06 56.0 20.2 181 82-281 124-337 (695)
303 4gga_A P55CDC, cell division c 97.2 0.15 5.3E-06 47.3 31.2 142 82-249 109-262 (420)
304 1flg_A Protein (quinoprotein e 97.2 0.085 2.9E-06 51.9 22.7 57 89-147 68-137 (582)
305 2oit_A Nucleoporin 214KDA; NH2 97.1 0.064 2.2E-06 50.6 20.9 146 81-247 39-222 (434)
306 2j04_B YDR362CP, TAU91; beta p 97.1 0.0058 2E-07 59.4 13.9 175 80-280 209-415 (524)
307 3vu4_A KMHSV2; beta-propeller 97.1 0.14 4.9E-06 46.4 29.9 194 79-282 20-260 (355)
308 2xdw_A Prolyl endopeptidase; a 97.0 0.1 3.5E-06 52.4 22.3 102 162-276 126-246 (710)
309 3zwu_A Alkaline phosphatase PH 97.0 0.0096 3.3E-07 58.3 14.0 74 159-237 474-549 (592)
310 4ggc_A P55CDC, cell division c 96.8 0.21 7.3E-06 43.7 24.5 220 81-366 70-310 (318)
311 2oit_A Nucleoporin 214KDA; NH2 96.7 0.046 1.6E-06 51.6 15.9 148 80-248 94-278 (434)
312 2w18_A PALB2, fancn, partner a 96.7 0.2 6.8E-06 45.7 19.1 137 89-246 192-355 (356)
313 2w18_A PALB2, fancn, partner a 96.6 0.42 1.4E-05 43.5 21.6 174 98-281 156-345 (356)
314 3zwu_A Alkaline phosphatase PH 96.6 0.021 7.1E-07 56.0 12.4 100 75-178 380-549 (592)
315 3iuj_A Prolyl endopeptidase; h 96.5 0.5 1.7E-05 47.3 22.4 103 162-280 130-252 (693)
316 4ggc_A P55CDC, cell division c 96.3 0.49 1.7E-05 41.3 29.3 142 82-249 29-182 (318)
317 2be1_A Serine/threonine-protei 96.3 0.13 4.4E-06 46.8 15.2 108 89-215 10-137 (339)
318 4a9v_A PHOX; hydrolase, beta-p 96.1 0.013 4.4E-07 56.8 7.8 58 77-135 474-549 (592)
319 1sqj_A OXG-RCBH, oligoxylogluc 95.9 1.8 6E-05 44.1 23.4 145 80-243 16-196 (789)
320 4gq1_A NUP37; propeller, trans 95.9 0.6 2.1E-05 42.9 18.3 66 81-147 139-219 (393)
321 2bkl_A Prolyl endopeptidase; m 95.9 1.6 5.6E-05 43.4 27.0 175 82-282 171-383 (695)
322 2cn3_A Xyloglucanase, beta-1,4 95.6 2.3 7.9E-05 42.9 24.4 98 80-178 24-151 (737)
323 1yr2_A Prolyl oligopeptidase; 95.4 0.4 1.4E-05 48.4 16.1 145 83-249 272-442 (741)
324 2hz6_A Endoplasmic reticulum t 95.4 0.013 4.5E-07 54.1 4.6 101 123-249 5-112 (369)
325 1k3i_A Galactose oxidase precu 94.4 1.5 5.2E-05 43.4 17.0 120 84-213 248-383 (656)
326 4gq1_A NUP37; propeller, trans 94.2 3.3 0.00011 37.8 25.2 134 92-248 104-286 (393)
327 3a0f_A Xyloglucanase; beta-pro 93.4 7.3 0.00025 39.3 23.7 140 80-239 22-202 (763)
328 2xe4_A Oligopeptidase B; hydro 93.3 3.8 0.00013 41.3 17.9 104 162-280 175-289 (751)
329 2xe4_A Oligopeptidase B; hydro 93.0 6.3 0.00022 39.7 18.9 111 122-249 178-305 (751)
330 2zwa_A Leucine carboxyl methyl 90.4 15 0.00052 36.5 19.7 144 88-250 396-579 (695)
331 1xip_A Nucleoporin NUP159; bet 89.3 13 0.00043 34.2 15.3 125 80-235 89-230 (388)
332 3a0f_A Xyloglucanase; beta-pro 89.3 2.8 9.5E-05 42.5 11.8 150 82-247 591-761 (763)
333 1k3i_A Galactose oxidase precu 88.3 7.4 0.00025 38.4 14.0 109 122-249 190-324 (656)
334 1xip_A Nucleoporin NUP159; bet 85.4 22 0.00076 32.6 17.3 137 80-249 39-192 (388)
335 1sqj_A OXG-RCBH, oligoxylogluc 84.4 30 0.001 35.0 16.2 146 82-248 593-764 (789)
336 3ii7_A Kelch-like protein 7; p 83.8 21 0.0007 30.9 24.0 132 98-249 23-179 (306)
337 2woz_A Kelch repeat and BTB do 82.3 24 0.00084 30.7 20.1 129 101-249 80-232 (318)
338 2cn3_A Xyloglucanase, beta-1,4 79.1 22 0.00076 35.6 12.9 117 118-244 24-160 (737)
339 2be1_A Serine/threonine-protei 77.0 7.1 0.00024 35.2 7.7 69 128-212 10-80 (339)
340 3sbq_A Nitrous-oxide reductase 76.6 5.2 0.00018 38.7 6.9 83 200-282 299-397 (638)
341 2xn4_A Kelch-like protein 2; s 75.4 39 0.0013 29.0 23.2 213 100-369 31-274 (302)
342 2uvk_A YJHT; unknown function, 74.3 46 0.0016 29.4 22.3 86 89-179 19-126 (357)
343 1zgk_A Kelch-like ECH-associat 74.0 43 0.0015 28.9 24.2 130 99-249 39-194 (308)
344 4asc_A Kelch repeat and BTB do 72.8 46 0.0016 28.8 25.4 206 99-357 13-249 (315)
345 3sbq_A Nitrous-oxide reductase 72.1 36 0.0012 33.0 11.3 65 111-179 317-396 (638)
346 2woz_A Kelch repeat and BTB do 71.2 51 0.0017 28.5 22.4 140 91-249 17-185 (318)
347 3f6k_A Sortilin; protein sorti 67.3 30 0.001 34.4 10.2 110 122-243 49-164 (685)
348 2vpj_A Kelch-like protein 12; 62.8 71 0.0024 27.2 24.4 140 89-249 62-232 (301)
349 2vpj_A Kelch-like protein 12; 62.2 73 0.0025 27.1 25.8 130 99-249 31-185 (301)
350 1zgk_A Kelch-like ECH-associat 56.4 96 0.0033 26.6 23.5 140 89-249 70-241 (308)
351 3ii7_A Kelch-like protein 7; p 53.0 1.1E+02 0.0037 26.1 25.7 144 89-249 55-226 (306)
352 2xn4_A Kelch-like protein 2; s 50.4 1.2E+02 0.004 25.8 25.0 142 89-249 61-230 (302)
353 4asc_A Kelch repeat and BTB do 49.6 1.2E+02 0.0043 25.9 19.6 47 200-249 68-127 (315)
354 2xk0_A Polycomb protein PCL; t 47.0 22 0.00076 23.5 3.5 41 265-335 20-60 (69)
355 3f6k_A Sortilin; protein sorti 42.1 2.7E+02 0.0091 27.6 20.4 82 90-177 56-156 (685)
356 2xzh_A Clathrin heavy chain 1; 40.2 2.1E+02 0.0071 25.8 10.3 75 218-338 259-334 (365)
357 1bpo_A Protein (clathrin); cla 33.6 3.1E+02 0.01 25.8 10.4 74 218-337 258-332 (494)
358 3hx6_A Type 4 fimbrial biogene 28.2 78 0.0027 30.5 5.5 53 197-249 221-285 (570)
359 2e5q_A PHD finger protein 19; 27.3 1.3E+02 0.0043 19.4 4.9 43 265-335 12-54 (63)
360 3s9j_A Member of DUF4221 famil 26.7 3.5E+02 0.012 24.3 12.2 95 231-359 40-150 (369)
361 2m0o_A PHD finger protein 1; t 22.3 68 0.0023 21.6 2.7 18 265-282 31-48 (79)
362 3elq_A Arylsulfate sulfotransf 21.6 3.4E+02 0.012 26.1 8.7 19 320-338 228-246 (571)
363 3ei3_A DNA damage-binding prot 21.1 7.5E+02 0.026 26.1 16.9 124 98-246 863-999 (1158)
364 2zwa_A Leucine carboxyl methyl 20.6 6E+02 0.021 24.8 21.9 115 122-249 391-523 (695)
No 1
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=100.00 E-value=1.6e-32 Score=253.74 Aligned_cols=268 Identities=24% Similarity=0.386 Sum_probs=213.8
Q ss_pred CCcCCCcceEEcCCCc-EEEEecCCeEEEEe-C-CeEEEEEec--------------------CCCceeceEEcC-CCcE
Q 017520 76 GSVNHPEDASMDKNGV-IYTATRDGWIKRLQ-D-GTWVNWKFI--------------------DSQTLVGLTSTK-EGHL 131 (370)
Q Consensus 76 ~~~~~P~~i~~d~~G~-l~v~~~~g~I~~~~-~-g~~~~~~~~--------------------~~~p~~gl~~d~-~G~L 131 (370)
+.+..||++++|++|+ +|++..+++|++++ + ++++.+... .+.|. ||++++ +|+|
T Consensus 16 g~~~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~-gi~~~~~~g~l 94 (322)
T 2fp8_A 16 APSYAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTY-DISYNLQNNQL 94 (322)
T ss_dssp CSSSCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEE-EEEEETTTTEE
T ss_pred CccCCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCc-eEEEcCCCCcE
Confidence 5578999999999998 88888899999999 4 467666531 24689 999996 8999
Q ss_pred EEEeCCCceEEEcCC-C-eEEEEeecCCcccccccceEEcC-CCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCC
Q 017520 132 IICDNANGLHKVSED-G-VENFLSYVNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSS 208 (370)
Q Consensus 132 ~v~~~~~gi~~~~~~-g-~~~~~~~~~g~~~~~~~~l~~d~-~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t 208 (370)
||++..+++++++.+ + ++.+.....+.++..++++++|+ +|++||++....++...+...+.+....++|+++|+++
T Consensus 95 ~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~ 174 (322)
T 2fp8_A 95 YIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPST 174 (322)
T ss_dssp EEEETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTT
T ss_pred EEEECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCC
Confidence 999988889999954 5 66665554555677899999999 99999999764444443333344445668999999998
Q ss_pred CeEEEEecCCCCccceEEccCCCEEEEEeCCc--EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCCEEEEEecCchh
Q 017520 209 NITTLVADGFYFANGVALSRDEDYVVVCESWK--CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDAR 286 (370)
Q Consensus 209 ~~~~~~~~~~~~p~gi~~~~dg~~l~v~~~~~--l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~~~~ 286 (370)
++++.+...+..|+|+++++||+.+|++++.. |++|++++...++.+.+.. .++ |+++++|++|++||++...++.
T Consensus 175 ~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~-~~g-P~gi~~d~~G~l~va~~~~~~~ 252 (322)
T 2fp8_A 175 KETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK-IPN-PGNIKRNADGHFWVSSSEELDG 252 (322)
T ss_dssp TEEEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE-CSS-EEEEEECTTSCEEEEEEEETTS
T ss_pred CEEEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEe-CCC-CCCeEECCCCCEEEEecCcccc
Confidence 88887777788999999999999999999865 9999998765566666653 566 9999999999999999763221
Q ss_pred HHHhhhcchhHHHHHHhCCccccccccCCCceEEEEECCCCcEEEEEeCCCCCccccceeEEEECCEEEEEeCCCCeEEE
Q 017520 287 RMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIGK 366 (370)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~~g~L~~gs~~~~~i~~ 366 (370)
. | .....+.|+++|++|+++..+..++|..+..++.+...+++||+++..+++|.+
T Consensus 253 ~-----------------~-------~~~~~~~v~~~d~~G~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~~~i~~ 308 (322)
T 2fp8_A 253 N-----------------M-------HGRVDPKGIKFDEFGNILEVIPLPPPFAGEHFEQIQEHDGLLYIGTLFHGSVGI 308 (322)
T ss_dssp S-----------------T-------TSCEEEEEEEECTTSCEEEEEECCTTTTTSCCCEEEEETTEEEEECSSCSEEEE
T ss_pred c-----------------c-------cCCCccEEEEECCCCCEEEEEECCCCCccccceEEEEeCCEEEEeecCCCceEE
Confidence 1 0 012246799999999999999998887667788888889999999999999999
Q ss_pred EeCC
Q 017520 367 VQLS 370 (370)
Q Consensus 367 ~~~~ 370 (370)
++++
T Consensus 309 ~~~~ 312 (322)
T 2fp8_A 309 LVYD 312 (322)
T ss_dssp EEC-
T ss_pred Eecc
Confidence 9874
No 2
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=99.96 E-value=3.4e-27 Score=218.63 Aligned_cols=270 Identities=20% Similarity=0.289 Sum_probs=197.7
Q ss_pred CceEecCCCcCCCcceEEcCCCcEEEEe-------------cCCeEEEEe-C---CeEEEEEec-------CCCceeceE
Q 017520 69 DFIKVGEGSVNHPEDASMDKNGVIYTAT-------------RDGWIKRLQ-D---GTWVNWKFI-------DSQTLVGLT 124 (370)
Q Consensus 69 ~~~~~~~~~~~~P~~i~~d~~G~l~v~~-------------~~g~I~~~~-~---g~~~~~~~~-------~~~p~~gl~ 124 (370)
..+.+. +...+||+|+++++|.+|+++ ..|+|++++ + ++.+.+... ..+|+ ||.
T Consensus 41 ~C~~i~-~~~~G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~Ph-Gi~ 118 (355)
T 3sre_A 41 NCNLVK-GIDNGSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPH-GIS 118 (355)
T ss_dssp CEEECT-TCCSCCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEE-EEE
T ss_pred CCEEeC-CCCCCcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeee-eeE
Confidence 455554 434699999999999999997 689999999 3 445444332 24899 999
Q ss_pred EcC--CC--cEEEEeCCC-----ceEEEcCCC-eEEEEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccce---ec
Q 017520 125 STK--EG--HLIICDNAN-----GLHKVSEDG-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYC---LD 191 (370)
Q Consensus 125 ~d~--~G--~L~v~~~~~-----gi~~~~~~g-~~~~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~---~~ 191 (370)
+.+ +| +|||++... +++++++++ ...+.....+.+++.+|+++++++|++|+++.. | +.+.. .+
T Consensus 119 ~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~--~-ftd~~~~~~e 195 (355)
T 3sre_A 119 TFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDH--Y-FIDPYLKSWE 195 (355)
T ss_dssp EEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESC--S-CSSHHHHHHH
T ss_pred EEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCc--E-eCCcccccch
Confidence 854 45 599998764 388888655 555666667788999999999999999999763 1 11100 11
Q ss_pred ccccCCCceEEEEeCCCCeEEEEecCCCCccceEEccCCCEEEEEeCCc--EEEEEeCCC-CCCceeeeccCCCCCCCce
Q 017520 192 ILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWK--CRKYWLKGE-RKGKLETFAENLPGAPDNI 268 (370)
Q Consensus 192 ~~~~~~~g~l~~~d~~t~~~~~~~~~~~~p~gi~~~~dg~~l~v~~~~~--l~~~~~~~~-~~~~~~~~~~~~~g~p~~i 268 (370)
..+....++||++|+. +++.+..++..|||+++++|++.+|++++.. |++|+++.. +.+..+.+ ..++.|||+
T Consensus 196 ~~~~~~~g~vyr~d~~--~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~--~~~g~PDGi 271 (355)
T 3sre_A 196 MHLGLAWSFVTYYSPN--DVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL--SFDTLVDNI 271 (355)
T ss_dssp HHTTCCCEEEEEECTT--CCEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE--ECSSEEEEE
T ss_pred hhccCCccEEEEEECC--eEEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE--eCCCCCceE
Confidence 1223467899999984 6777888999999999999999999999876 999999743 34444455 357889999
Q ss_pred eECC-CCCEEEEEecCchhHHHhhhcchhHHHHHHhCCccccccccCCCceEEEEEC----CCCcEEEEEeCCCCCcccc
Q 017520 269 NLAP-DGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVA----EDGTIIRNLVDPTGQLMSF 343 (370)
Q Consensus 269 ~~d~-~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~----~~g~~~~~~~~~~g~~~~~ 343 (370)
++|+ +|++|+++..+...++ .--|.. .+-..+.++. +++++.+.|.+ +|..+..
T Consensus 272 ~vD~e~G~lwva~~~~g~~v~-------------~~~P~~-------~~~s~v~rI~~~~~~~~~v~~v~~d-dG~~l~~ 330 (355)
T 3sre_A 272 SVDPVTGDLWVGCHPNGMRIF-------------FYDAEN-------PPGSEVLRIQDILSEEPKVTVVYAE-NGTVLQG 330 (355)
T ss_dssp EECTTTCCEEEEEESCHHHHH-------------SCCTTS-------CCCEEEEEEECTTSSSCEEEEEEEE-CSSSCCS
T ss_pred EEeCCCCcEEEEecCCceEEE-------------EECCCC-------CCCCEEEEEEccCCCCcEEEEEEEc-CCCEEEe
Confidence 9999 5999998764322111 111221 1124466665 57888999988 8988889
Q ss_pred ceeEEEECCEEEEEeCCCCeEEEEeC
Q 017520 344 VTSGLQVDNHLYVISLTSNFIGKVQL 369 (370)
Q Consensus 344 ~t~~~~~~g~L~~gs~~~~~i~~~~~ 369 (370)
.|.+...+|+|||||+..+ +..|+|
T Consensus 331 ~T~a~~~~g~L~iGsv~~~-~l~c~~ 355 (355)
T 3sre_A 331 STVAAVYKGKLLIGTVFHK-ALYCDL 355 (355)
T ss_dssp EEEEEEETTEEEEEESSSC-EEEEEC
T ss_pred eEEEEEECCEEEEEEcCCC-ceeccC
Confidence 9999999999999999998 445543
No 3
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.95 E-value=1.6e-25 Score=205.12 Aligned_cols=253 Identities=16% Similarity=0.229 Sum_probs=192.7
Q ss_pred CceEecCCCcCCCcceEEcCCCc-EEEEe-cCCeEEEEe-CCeEEEEEecCCCceeceEEcCCCcEEEEeCC-CceEEEc
Q 017520 69 DFIKVGEGSVNHPEDASMDKNGV-IYTAT-RDGWIKRLQ-DGTWVNWKFIDSQTLVGLTSTKEGHLIICDNA-NGLHKVS 144 (370)
Q Consensus 69 ~~~~~~~~~~~~P~~i~~d~~G~-l~v~~-~~g~I~~~~-~g~~~~~~~~~~~p~~gl~~d~~G~L~v~~~~-~gi~~~~ 144 (370)
..+++..+ +.-+|+.+++++|+ ||+.+ .+++|++++ +|+.+.+....+.+. +++++++|+||+++.. .+|.+++
T Consensus 36 ~~~~l~~~-~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g~~~~~~~~~~~~~-gl~~d~dG~l~v~~~~~~~v~~~~ 113 (305)
T 3dr2_A 36 RLLTLYDQ-ATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDGTVDVLLDATAFTN-GNAVDAQQRLVHCEHGRRAITRSD 113 (305)
T ss_dssp CCEEEECC-CSSEEEEEEEGGGTEEEEEETTTTEEEEEETTSCEEEEEESCSCEE-EEEECTTSCEEEEETTTTEEEEEC
T ss_pred ceEEEecC-CcCccCCeEeCCCCEEEEEECCCCEEEEEeCCCCEEEEeCCCCccc-eeeECCCCCEEEEECCCCEEEEEC
Confidence 44566665 56799999999887 65555 788999999 888888877778899 9999999999999876 6799999
Q ss_pred CCC-eEEEEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccce--ecccccCCCceEEEEeCCCCeEEEEecCCCCc
Q 017520 145 EDG-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYC--LDILEGKPHGQLLKYDPSSNITTLVADGFYFA 221 (370)
Q Consensus 145 ~~g-~~~~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~--~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~p 221 (370)
.+| ++.+.....+.+++.+++++++++|++||+|.. |+..... .........+.|+++|+++++++.+. .+..|
T Consensus 114 ~~g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~--~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p 190 (305)
T 3dr2_A 114 ADGQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPP--FGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDHP 190 (305)
T ss_dssp TTSCEEEEECEETTEECSCCCCEEECTTSCEEEECCS--GGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESSE
T ss_pred CCCCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcC--CCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCCC
Confidence 668 777766556666788999999999999999853 1110000 00001123478999999888887776 77889
Q ss_pred cceEEccCCCEEEEEeCC------c-EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCCEEEEEecCchhHHHhhhcc
Q 017520 222 NGVALSRDEDYVVVCESW------K-CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSS 294 (370)
Q Consensus 222 ~gi~~~~dg~~l~v~~~~------~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~ 294 (370)
+|+++++|++.||++++. + |++|++++......+.+.....+.|+++++|++|++|+++..
T Consensus 191 ~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~~~------------ 258 (305)
T 3dr2_A 191 NGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSSGT------------ 258 (305)
T ss_dssp EEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECCSS------------
T ss_pred cceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEecCC------------
Confidence 999999999999999886 4 999998764333344554445678999999999999999843
Q ss_pred hhHHHHHHhCCccccccccCCCceEEEEECCCCcEEEEEeCCCCCccccceeEEE--ECCEEEEEeCCCCeEEEEeC
Q 017520 295 KLIKHVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQ--VDNHLYVISLTSNFIGKVQL 369 (370)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~--~~g~L~~gs~~~~~i~~~~~ 369 (370)
.|.+++++|+.+..+..+.+ ++.+.. .+++||+++.. .|.++++
T Consensus 259 ------------------------gv~~~~~~g~~~~~~~~~~~-----~~~~~f~~d~~~L~it~~~--~l~~~~~ 304 (305)
T 3dr2_A 259 ------------------------GVCVFDSDGQLLGHIPTPGT-----ASNCTFDQAQQRLFITGGP--CLWMLPL 304 (305)
T ss_dssp ------------------------EEEEECTTSCEEEEEECSSC-----CCEEEECTTSCEEEEEETT--EEEEEEC
T ss_pred ------------------------cEEEECCCCCEEEEEECCCc-----eeEEEEeCCCCEEEEEcCC--eEEEEEC
Confidence 38999999999999987653 334444 34689999964 6777765
No 4
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.93 E-value=1.1e-23 Score=191.58 Aligned_cols=250 Identities=20% Similarity=0.264 Sum_probs=184.1
Q ss_pred ceEecCCCcCCCcceEEcCCCc-EE-EEecCCeEEEEe-CCeEEEEEecCCCceeceEEcCCCcEEEEeCC-CceEEEcC
Q 017520 70 FIKVGEGSVNHPEDASMDKNGV-IY-TATRDGWIKRLQ-DGTWVNWKFIDSQTLVGLTSTKEGHLIICDNA-NGLHKVSE 145 (370)
Q Consensus 70 ~~~~~~~~~~~P~~i~~d~~G~-l~-v~~~~g~I~~~~-~g~~~~~~~~~~~p~~gl~~d~~G~L~v~~~~-~gi~~~~~ 145 (370)
.+.+..+ +..||++++|++|+ || ++..+++|++++ ++..+.+....+.|. +++++++|+||+++.. .+|++++.
T Consensus 20 ~~~l~~~-~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~l~~~~dg~l~v~~~~~~~i~~~d~ 97 (296)
T 3e5z_A 20 ARRLADG-FTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQLSPEMHPSHHQN-GHCLNKQGHLIACSHGLRRLERQRE 97 (296)
T ss_dssp CEEEECC-CSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSCEEEEESSCSSEE-EEEECTTCCEEEEETTTTEEEEECS
T ss_pred EEEEecC-CccccCCeEeCCCCEEEEEeCCCCEEEEEECCCCeEEEECCCCCcc-eeeECCCCcEEEEecCCCeEEEEcC
Confidence 3555544 67899999999998 55 555788999999 444777766677789 9999999999999875 68999994
Q ss_pred -CC-eEEEEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccce--ecccccCCCceEEEEeCCCCeEEEEecCCCCc
Q 017520 146 -DG-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYC--LDILEGKPHGQLLKYDPSSNITTLVADGFYFA 221 (370)
Q Consensus 146 -~g-~~~~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~--~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~p 221 (370)
+| ++.+.....+.++..++++++|++|++|++|+. ++..... .........++|++++++ ++.+.+......|
T Consensus 98 ~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~--~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~ 174 (296)
T 3e5z_A 98 PGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPT--YGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVKP 174 (296)
T ss_dssp TTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECS--HHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSSE
T ss_pred CCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCc--cccccccccccccccCCCcEEEEECCC-CCEEEeecCCCCC
Confidence 78 666654444555678999999999999999752 1100000 000011234689999998 7777777888899
Q ss_pred cceEEccCCCEEEEEeCCc--EEEEEeCC-CCC-CceeeeccCCCCCCCceeECCCCCEEEEEecCchhHHHhhhcchhH
Q 017520 222 NGVALSRDEDYVVVCESWK--CRKYWLKG-ERK-GKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLI 297 (370)
Q Consensus 222 ~gi~~~~dg~~l~v~~~~~--l~~~~~~~-~~~-~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~ 297 (370)
+++++++||+.+ ++++.. |++|+++. .+. ...+.+ ....+.|+++++|++|++|+++ .+
T Consensus 175 ~gi~~s~dg~~l-v~~~~~~~i~~~~~~~~g~~~~~~~~~-~~~~~~p~~i~~d~~G~l~v~~-~~-------------- 237 (296)
T 3e5z_A 175 NGLAFLPSGNLL-VSDTGDNATHRYCLNARGETEYQGVHF-TVEPGKTDGLRVDAGGLIWASA-GD-------------- 237 (296)
T ss_dssp EEEEECTTSCEE-EEETTTTEEEEEEECSSSCEEEEEEEE-CCSSSCCCSEEEBTTSCEEEEE-TT--------------
T ss_pred ccEEECCCCCEE-EEeCCCCeEEEEEECCCCcCcCCCeEe-eCCCCCCCeEEECCCCCEEEEc-CC--------------
Confidence 999999999977 888764 99999862 222 223444 4455689999999999999999 32
Q ss_pred HHHHHhCCccccccccCCCceEEEEECCCCcEEEEEeCCCCCccccceeEEEE--C-CEEEEEeCCCCeEEEEeC
Q 017520 298 KHVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQV--D-NHLYVISLTSNFIGKVQL 369 (370)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~g~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~--~-g~L~~gs~~~~~i~~~~~ 369 (370)
.|.+++++|+.+..+..+.+ ++.+... + ++||+++.. .|.++++
T Consensus 238 ---------------------~v~~~~~~g~~~~~~~~~~~-----~~~~~f~~~d~~~L~v~t~~--~l~~~~~ 284 (296)
T 3e5z_A 238 ---------------------GVHVLTPDGDELGRVLTPQT-----TSNLCFGGPEGRTLYMTVST--EFWSIET 284 (296)
T ss_dssp ---------------------EEEEECTTSCEEEEEECSSC-----CCEEEEESTTSCEEEEEETT--EEEEEEC
T ss_pred ---------------------eEEEECCCCCEEEEEECCCC-----ceeEEEECCCCCEEEEEcCC--eEEEEEc
Confidence 48999999999999987664 3444442 3 579999864 6777765
No 5
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.92 E-value=4.2e-23 Score=188.58 Aligned_cols=258 Identities=21% Similarity=0.301 Sum_probs=184.6
Q ss_pred ceEecCCCcCCCcceEEcCCCcEEEE--------ecCCeEEEEe--CCeEEEEEe-----cCCCceeceEEcCC-CcEEE
Q 017520 70 FIKVGEGSVNHPEDASMDKNGVIYTA--------TRDGWIKRLQ--DGTWVNWKF-----IDSQTLVGLTSTKE-GHLII 133 (370)
Q Consensus 70 ~~~~~~~~~~~P~~i~~d~~G~l~v~--------~~~g~I~~~~--~g~~~~~~~-----~~~~p~~gl~~d~~-G~L~v 133 (370)
.+.+..+ +..|+++++|++|++|++ ..+++|++++ ++++..+.. ....|. +++++++ |+||+
T Consensus 10 ~~~~~~~-~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~-~i~~~~~~g~l~v 87 (314)
T 1pjx_A 10 FTKVTED-IPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPA-GCQCDRDANQLFV 87 (314)
T ss_dssp CEEEECC-CTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEE-EEEECSSSSEEEE
T ss_pred Hhhhhcc-CCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCc-eEEEecCCCcEEE
Confidence 3445544 789999999999999999 4778999999 677766644 335688 9999999 99999
Q ss_pred EeCCCceEEEcCCC-eEEE-EeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeE
Q 017520 134 CDNANGLHKVSEDG-VENF-LSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNIT 211 (370)
Q Consensus 134 ~~~~~gi~~~~~~g-~~~~-~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~ 211 (370)
++...+|++++.+| ++.+ .....+.+...++++++|++|++|+++........++. .......++|+++|++ ++.
T Consensus 88 ~~~~~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~-g~~ 164 (314)
T 1pjx_A 88 ADMRLGLLVVQTDGTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYT--RSMQEKFGSIYCFTTD-GQM 164 (314)
T ss_dssp EETTTEEEEEETTSCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCC--BTTSSSCEEEEEECTT-SCE
T ss_pred EECCCCEEEEeCCCCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCccccccccc--ccccCCCCeEEEECCC-CCE
Confidence 99777999999448 6544 33223334467899999999999999864110000000 0011234789999987 666
Q ss_pred EEEecCCCCccceEEc----cCCCEEEEEeCCc--EEEEEeCC-CCCCceeeecc--CCC-CCCCceeECCCCCEEEEEe
Q 017520 212 TLVADGFYFANGVALS----RDEDYVVVCESWK--CRKYWLKG-ERKGKLETFAE--NLP-GAPDNINLAPDGTFWIAII 281 (370)
Q Consensus 212 ~~~~~~~~~p~gi~~~----~dg~~l~v~~~~~--l~~~~~~~-~~~~~~~~~~~--~~~-g~p~~i~~d~~G~lwv~~~ 281 (370)
+.+......|++++++ +|++.+|+++... |++|++++ .+....+.+.. ... +.|+++++|++|++|+++.
T Consensus 165 ~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~ 244 (314)
T 1pjx_A 165 IQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANW 244 (314)
T ss_dssp EEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEE
T ss_pred EEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEc
Confidence 6666666789999999 9998899998754 99999762 22222222221 111 5689999999999999986
Q ss_pred cCchhHHHhhhcchhHHHHHHhCCccccccccCCCceEEEEECCC-CcEEEEEeCCCCCccccceeEEEE-CCE-EEEEe
Q 017520 282 KLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAED-GTIIRNLVDPTGQLMSFVTSGLQV-DNH-LYVIS 358 (370)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~-g~~~~~~~~~~g~~~~~~t~~~~~-~g~-L~~gs 358 (370)
.. +.|.++|++ |+.+..+..+. ..++.+... +|+ ||+++
T Consensus 245 ~~----------------------------------~~i~~~d~~~g~~~~~~~~~~----~~~~~i~~~~dg~~l~v~~ 286 (314)
T 1pjx_A 245 GS----------------------------------SHIEVFGPDGGQPKMRIRCPF----EKPSNLHFKPQTKTIFVTE 286 (314)
T ss_dssp TT----------------------------------TEEEEECTTCBSCSEEEECSS----SCEEEEEECTTSSEEEEEE
T ss_pred CC----------------------------------CEEEEEcCCCCcEeEEEeCCC----CCceeEEECCCCCEEEEEe
Confidence 54 468999998 88887776543 245555553 454 99999
Q ss_pred CCCCeEEEEeCC
Q 017520 359 LTSNFIGKVQLS 370 (370)
Q Consensus 359 ~~~~~i~~~~~~ 370 (370)
...+.|.+++++
T Consensus 287 ~~~~~l~~~~~~ 298 (314)
T 1pjx_A 287 HENNAVWKFEWQ 298 (314)
T ss_dssp TTTTEEEEEECS
T ss_pred CCCCeEEEEeCC
Confidence 998999998863
No 6
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.92 E-value=1.4e-22 Score=184.73 Aligned_cols=240 Identities=13% Similarity=0.133 Sum_probs=177.1
Q ss_pred cCCCcCCCcceEEcC-CCcEEEEe-cCCeEEEEe--CCeEEEEEecCCCceeceEEcCCCcEEEEeCCCceEEEc-CCC-
Q 017520 74 GEGSVNHPEDASMDK-NGVIYTAT-RDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGHLIICDNANGLHKVS-EDG- 147 (370)
Q Consensus 74 ~~~~~~~P~~i~~d~-~G~l~v~~-~~g~I~~~~--~g~~~~~~~~~~~p~~gl~~d~~G~L~v~~~~~gi~~~~-~~g- 147 (370)
......-+|+.+.++ ++.||+.+ .+++|++++ +++...+ .....+. +++++++|+||++. ..+|++++ .++
T Consensus 8 ~~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~-~~~~~~~-~i~~~~dG~l~v~~-~~~l~~~d~~~g~ 84 (297)
T 3g4e_A 8 LPENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRV-TMDAPVS-SVALRQSGGYVATI-GTKFCALNWKEQS 84 (297)
T ss_dssp ECCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEE-ECSSCEE-EEEEBTTSSEEEEE-TTEEEEEETTTTE
T ss_pred eccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEEE-eCCCceE-EEEECCCCCEEEEE-CCeEEEEECCCCc
Confidence 333356789999997 67888888 678999999 4555544 3456788 99999999999987 57999999 567
Q ss_pred eEEEEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecCCCCccceEEc
Q 017520 148 VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALS 227 (370)
Q Consensus 148 ~~~~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~p~gi~~~ 227 (370)
++.+.....+.+...++++++|++|++|+++...... ........+.|++++++ ++...+...+..|+|++++
T Consensus 85 ~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~------~~~~~~~~~~l~~~d~~-g~~~~~~~~~~~pngi~~s 157 (297)
T 3g4e_A 85 AVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETA------PAVLERHQGALYSLFPD-HHVKKYFDQVDISNGLDWS 157 (297)
T ss_dssp EEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSB------TTBCCTTCEEEEEECTT-SCEEEEEEEESBEEEEEEC
T ss_pred EEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccc------cccccCCCcEEEEEECC-CCEEEEeeccccccceEEc
Confidence 6666554344456678999999999999997531100 00011245789999987 5566666777889999999
Q ss_pred cCCCEEEEEeCCc--EEEEEeC--CCCCCceeeecc--CCCCCCCceeECCCCCEEEEEecCchhHHHhhhcchhHHHHH
Q 017520 228 RDEDYVVVCESWK--CRKYWLK--GERKGKLETFAE--NLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVL 301 (370)
Q Consensus 228 ~dg~~l~v~~~~~--l~~~~~~--~~~~~~~~~~~~--~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~ 301 (370)
+|++.+|++++.. |++|+++ +......+.+.. ...+.|+++++|++|++|+++..+
T Consensus 158 pdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~------------------ 219 (297)
T 3g4e_A 158 LDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNG------------------ 219 (297)
T ss_dssp TTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETT------------------
T ss_pred CCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCC------------------
Confidence 9999999999865 9999874 222222333432 223579999999999999999865
Q ss_pred HhCCccccccccCCCceEEEEECCC-CcEEEEEeCCCCCccccceeEEEEC---CEEEEEeCCC
Q 017520 302 AAYPKLFSQFITLGGGAHLIHVAED-GTIIRNLVDPTGQLMSFVTSGLQVD---NHLYVISLTS 361 (370)
Q Consensus 302 ~~~~~~~~~~~~~~~~g~v~~~~~~-g~~~~~~~~~~g~~~~~~t~~~~~~---g~L~~gs~~~ 361 (370)
+.|.++|++ |+++..+..+.. .++.+.+.+ ++||+++...
T Consensus 220 ----------------~~v~~~d~~tG~~~~~i~~p~~----~~t~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 220 ----------------GRVIRLDPVTGKRLQTVKLPVD----KTTSCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp ----------------TEEEEECTTTCCEEEEEECSSS----BEEEEEEESGGGCEEEEEEBCT
T ss_pred ----------------CEEEEEcCCCceEEEEEECCCC----CceEEEEeCCCCCEEEEEcCCc
Confidence 469999997 999998877642 356666652 6899998754
No 7
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.89 E-value=9e-21 Score=173.61 Aligned_cols=222 Identities=20% Similarity=0.262 Sum_probs=166.1
Q ss_pred CCCcceEEcCCCcEEEEe-cCCeEEEEe-CCeEEEEEecCCCceeceEEcCCCcEEEEeCC-Cc--eEEEc-CCC-eEEE
Q 017520 79 NHPEDASMDKNGVIYTAT-RDGWIKRLQ-DGTWVNWKFIDSQTLVGLTSTKEGHLIICDNA-NG--LHKVS-EDG-VENF 151 (370)
Q Consensus 79 ~~P~~i~~d~~G~l~v~~-~~g~I~~~~-~g~~~~~~~~~~~p~~gl~~d~~G~L~v~~~~-~g--i~~~~-~~g-~~~~ 151 (370)
..||++++|++|+||+++ .+++|++++ +++...+....+.|. +++++++|+|||++.. ++ +++++ ++| ++.+
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~~~~~~~~~~p~-gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~ 110 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQQIHATVEGKVS-GLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETL 110 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEEECSSEEE-EEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCceEEEEeCCCCce-eEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEE
Confidence 579999999999999999 789999999 777666666667899 9999999999999865 23 88888 677 6655
Q ss_pred EeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEE-----------ecCCCC
Q 017520 152 LSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLV-----------ADGFYF 220 (370)
Q Consensus 152 ~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~-----------~~~~~~ 220 (370)
... .. ..++++++..+++++|+++. ..+.||++|+.++..++. ...+..
T Consensus 111 ~~~-~~--~~~~~g~~~~~~~~~~v~d~-----------------~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~ 170 (306)
T 2p4o_A 111 LTL-PD--AIFLNGITPLSDTQYLTADS-----------------YRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPA 170 (306)
T ss_dssp EEC-TT--CSCEEEEEESSSSEEEEEET-----------------TTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCS
T ss_pred EeC-CC--ccccCcccccCCCcEEEEEC-----------------CCCeEEEEeCCCCcEeEEEECCccccccccCCCCc
Confidence 443 22 34678888888888999985 357999999876543322 134567
Q ss_pred ccceEEccCCCEEEEEeCCc--EEEEEeCC-CCCCceeeeccCCCCCCCceeECCCCCEEEEEecCchhHHHhhhcchhH
Q 017520 221 ANGVALSRDEDYVVVCESWK--CRKYWLKG-ERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLI 297 (370)
Q Consensus 221 p~gi~~~~dg~~l~v~~~~~--l~~~~~~~-~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~ 297 (370)
|+|+ ++|++.+|++++.. |++|++++ .+.+..+.+... ..|+++++|++|++|++....
T Consensus 171 pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~--~~P~gi~vd~dG~l~va~~~~-------------- 232 (306)
T 2p4o_A 171 ANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQ--TNIDDFAFDVEGNLYGATHIY-------------- 232 (306)
T ss_dssp EEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEES--CCCSSEEEBTTCCEEEECBTT--------------
T ss_pred CCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEecc--CCCCCeEECCCCCEEEEeCCC--------------
Confidence 8998 88898999999876 99999875 334444444322 469999999999999998764
Q ss_pred HHHHHhCCccccccccCCCceEEEEECCCCcEEEEEeCCCCCccccceeEEEE----C-CEEEEEeCCC
Q 017520 298 KHVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQV----D-NHLYVISLTS 361 (370)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~g~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~----~-g~L~~gs~~~ 361 (370)
+.|.+++++|+......-+.+ ....+.+... + ++||+.+..+
T Consensus 233 --------------------~~V~~~~~~G~~~~~~~~~~~--~~~p~~~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 233 --------------------NSVVRIAPDRSTTIIAQAEQG--VIGSTAVAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp --------------------CCEEEECTTCCEEEEECGGGT--CTTEEEEEECCSTTTTTEEEEEECTT
T ss_pred --------------------CeEEEECCCCCEEEEeecccc--cCCceEEEEecccCCCCEEEEECCCC
Confidence 458999999987553322222 2345666654 3 7999998753
No 8
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.89 E-value=2.8e-20 Score=167.90 Aligned_cols=233 Identities=15% Similarity=0.258 Sum_probs=170.2
Q ss_pred CCCcCCCcceEEcCCCcEEEEe-cCCeEEEEe-CCeEE-EEEec------CCCceeceEE-cCCCcEEEEeC--CCceEE
Q 017520 75 EGSVNHPEDASMDKNGVIYTAT-RDGWIKRLQ-DGTWV-NWKFI------DSQTLVGLTS-TKEGHLIICDN--ANGLHK 142 (370)
Q Consensus 75 ~~~~~~P~~i~~d~~G~l~v~~-~~g~I~~~~-~g~~~-~~~~~------~~~p~~gl~~-d~~G~L~v~~~--~~gi~~ 142 (370)
.+.+..|.+|++|++|++|+++ .+++|.+++ +++.. .+... ...|. ++++ +++|+||+++. ...|.+
T Consensus 26 ~g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~-~i~~~~~~g~l~v~~~~~~~~i~~ 104 (286)
T 1q7f_A 26 EGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPN-RVAVVRNSGDIIVTERSPTHQIQI 104 (286)
T ss_dssp TTCBSCEEEEEECTTCCEEEEEGGGTEEEEECTTSCEEEEECCBSSSTTCBSSEE-EEEEETTTTEEEEEECGGGCEEEE
T ss_pred CCccCCCceEEECCCCCEEEEECCCCEEEEECCCCcEEEEecccCCCcccccCce-EEEEEcCCCeEEEEcCCCCCEEEE
Confidence 3567889999999999999997 678999999 76543 33221 23688 9999 58999999985 467889
Q ss_pred EcCCC--eEEEEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEe--cCC
Q 017520 143 VSEDG--VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA--DGF 218 (370)
Q Consensus 143 ~~~~g--~~~~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~--~~~ 218 (370)
++++| +..+ .......+++++++++|++|+++. ..++|+++|+++.....+. ..+
T Consensus 105 ~d~~g~~~~~~----~~~~~~~~~~i~~~~~g~l~v~~~-----------------~~~~i~~~~~~g~~~~~~~~~~~~ 163 (286)
T 1q7f_A 105 YNQYGQFVRKF----GATILQHPRGVTVDNKGRIIVVEC-----------------KVMRVIIFDQNGNVLHKFGCSKHL 163 (286)
T ss_dssp ECTTSCEEEEE----CTTTCSCEEEEEECTTSCEEEEET-----------------TTTEEEEECTTSCEEEEEECTTTC
T ss_pred ECCCCcEEEEe----cCccCCCceEEEEeCCCCEEEEEC-----------------CCCEEEEEcCCCCEEEEeCCCCcc
Confidence 98777 3333 112245789999999999999976 3468999998755555443 345
Q ss_pred CCccceEEccCCCEEEEEeCCc--EEEEEeCCCCCCceeeeccC-CCCCCCceeECCCCCEEEEEecCchhHHHhhhcch
Q 017520 219 YFANGVALSRDEDYVVVCESWK--CRKYWLKGERKGKLETFAEN-LPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSK 295 (370)
Q Consensus 219 ~~p~gi~~~~dg~~l~v~~~~~--l~~~~~~~~~~~~~~~~~~~-~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~ 295 (370)
..|++++++++|+ +|+++... |.+|+.++. ....+... ....|.++++|++|++|++....
T Consensus 164 ~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~g~---~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~------------ 227 (286)
T 1q7f_A 164 EFPNGVVVNDKQE-IFISDNRAHCVKVFNYEGQ---YLRQIGGEGITNYPIGVGINSNGEILIADNHN------------ 227 (286)
T ss_dssp SSEEEEEECSSSE-EEEEEGGGTEEEEEETTCC---EEEEESCTTTSCSEEEEEECTTCCEEEEECSS------------
T ss_pred CCcEEEEECCCCC-EEEEECCCCEEEEEcCCCC---EEEEEccCCccCCCcEEEECCCCCEEEEeCCC------------
Confidence 6799999999997 99998754 999997653 22233211 12468999999999999998654
Q ss_pred hHHHHHHhCCccccccccCCCceEEEEECCCCcEEEEEeCCCCCccccceeEEE-ECCEEEEEeCCCCeEEEEeC
Q 017520 296 LIKHVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQ-VDNHLYVISLTSNFIGKVQL 369 (370)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~-~~g~L~~gs~~~~~i~~~~~ 369 (370)
.+.|..++++|+.+..+....+. ..+..+.. .+|+||+++. .+.|.++++
T Consensus 228 ---------------------~~~i~~~~~~g~~~~~~~~~~~~--~~~~~i~~~~~g~l~vs~~-~~~v~v~~~ 278 (286)
T 1q7f_A 228 ---------------------NFNLTIFTQDGQLISALESKVKH--AQCFDVALMDDGSVVLASK-DYRLYIYRY 278 (286)
T ss_dssp ---------------------SCEEEEECTTSCEEEEEEESSCC--SCEEEEEEETTTEEEEEET-TTEEEEEEC
T ss_pred ---------------------CEEEEEECCCCCEEEEEcccCCC--CcceeEEECCCCcEEEECC-CCeEEEEEc
Confidence 12589999999999888654321 22344444 4699999975 678888775
No 9
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.88 E-value=1.6e-20 Score=180.09 Aligned_cols=237 Identities=13% Similarity=0.096 Sum_probs=175.4
Q ss_pred CcCCCcceEEcCC---CcEEEEecCCeEEEEe--CCeEEEEEecCCCceeceEEcCCCcEEEEeCC-----CceEEEcCC
Q 017520 77 SVNHPEDASMDKN---GVIYTATRDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGHLIICDNA-----NGLHKVSED 146 (370)
Q Consensus 77 ~~~~P~~i~~d~~---G~l~v~~~~g~I~~~~--~g~~~~~~~~~~~p~~gl~~d~~G~L~v~~~~-----~gi~~~~~~ 146 (370)
.|..|++|++|++ |+||+++..++|++++ ++++..+......|. +|+++++|+|||++.. .+++.++++
T Consensus 137 ~~~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~~~~~P~-giavd~dG~lyVad~~~~~~~~gv~~~~~~ 215 (433)
T 4hw6_A 137 AFDNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTTNIGQCA-DVNFTLNGDMVVVDDQSSDTNTGIYLFTRA 215 (433)
T ss_dssp CCSCCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECCCCSCEE-EEEECTTCCEEEEECCSCTTSEEEEEECGG
T ss_pred ccCCCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeecCCCCcc-EEEECCCCCEEEEcCCCCcccceEEEEECC
Confidence 6789999999974 9999999658999999 788888776677899 9999999999999963 357777743
Q ss_pred C-eE--EEEeecCCcccccccceEEcC-CCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeE-EEEec--CCC
Q 017520 147 G-VE--NFLSYVNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNIT-TLVAD--GFY 219 (370)
Q Consensus 147 g-~~--~~~~~~~g~~~~~~~~l~~d~-~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~-~~~~~--~~~ 219 (370)
+ +. .... .+..|+++++|+ +|+|||++. .+++|+++|++++.+ +.+.. ...
T Consensus 216 ~~~~~~~~~~-----~~~~P~giavd~~~G~lyv~d~-----------------~~~~V~~~d~~~g~~~~~~~~~~~~~ 273 (433)
T 4hw6_A 216 SGFTERLSLC-----NARGAKTCAVHPQNGKIYYTRY-----------------HHAMISSYDPATGTLTEEEVMMDTKG 273 (433)
T ss_dssp GTTCCEEEEE-----ECSSBCCCEECTTTCCEEECBT-----------------TCSEEEEECTTTCCEEEEEEECSCCS
T ss_pred CCeecccccc-----ccCCCCEEEEeCCCCeEEEEEC-----------------CCCEEEEEECCCCeEEEEEeccCCCC
Confidence 3 22 1111 256899999999 899999986 357899999987766 33322 233
Q ss_pred CccceEEccCCCEEEEEeCCc--EEEEEeCCC--CCCceeeeccC--C------------CCCCCceeE---------CC
Q 017520 220 FANGVALSRDEDYVVVCESWK--CRKYWLKGE--RKGKLETFAEN--L------------PGAPDNINL---------AP 272 (370)
Q Consensus 220 ~p~gi~~~~dg~~l~v~~~~~--l~~~~~~~~--~~~~~~~~~~~--~------------~g~p~~i~~---------d~ 272 (370)
.+.+++++++|+.||+++..+ |++++.++. .......+... . -..|.++++ |.
T Consensus 274 ~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~ 353 (433)
T 4hw6_A 274 SNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEED 353 (433)
T ss_dssp SCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSC
T ss_pred CcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCC
Confidence 456799999999999999876 999987642 22222222211 1 124778999 99
Q ss_pred CCCEEEEEecCchhHHHhhhcchhHHHHHHhCCccccccccCCCceEEEEECCCCcEEEEEeCC--------CC-----C
Q 017520 273 DGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDP--------TG-----Q 339 (370)
Q Consensus 273 ~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~g~~~~~~~~~--------~g-----~ 339 (370)
+|+|||+...+ ..|.+++++|++....... +| .
T Consensus 354 ~g~lyvaD~~n----------------------------------~~I~~~~~~G~v~t~~G~g~~~~~G~~dG~~~~~~ 399 (433)
T 4hw6_A 354 EYDFYFCDRDS----------------------------------HTVRVLTPEGRVTTYAGRGNSREWGYVDGELRSQA 399 (433)
T ss_dssp CEEEEEEETTT----------------------------------TEEEEECTTSEEEEEECCCTTCSSCCBCEETTTTC
T ss_pred CCcEEEEECCC----------------------------------CEEEEECCCCCEEEEEeCCCCCccccCCCcccccc
Confidence 99999998765 4688999999766655321 12 1
Q ss_pred ccccceeEEEE--CCEEEEEeCCCCeEEEEeCC
Q 017520 340 LMSFVTSGLQV--DNHLYVISLTSNFIGKVQLS 370 (370)
Q Consensus 340 ~~~~~t~~~~~--~g~L~~gs~~~~~i~~~~~~ 370 (370)
.++....+... +|+||++...+++|.++.++
T Consensus 400 ~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 400 LFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp BCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred EeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 24445666665 69999999999999999864
No 10
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.88 E-value=2.4e-20 Score=166.57 Aligned_cols=228 Identities=17% Similarity=0.210 Sum_probs=164.0
Q ss_pred CCcceEEcCCCcEEE-Ee-cCCeEEEEe-CC-eEEEEEe-cCCCceeceEEcCCCcEEEEeCCCceEEEcCCC--eEEEE
Q 017520 80 HPEDASMDKNGVIYT-AT-RDGWIKRLQ-DG-TWVNWKF-IDSQTLVGLTSTKEGHLIICDNANGLHKVSEDG--VENFL 152 (370)
Q Consensus 80 ~P~~i~~d~~G~l~v-~~-~~g~I~~~~-~g-~~~~~~~-~~~~p~~gl~~d~~G~L~v~~~~~gi~~~~~~g--~~~~~ 152 (370)
.|++|++|++|++|+ ++ .+++|++++ ++ ....+.. ....|. +++++++|+||+++..++|++++.++ ...+
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~-~i~~~~~g~l~v~~~~~~i~~~d~~~~~~~~~- 102 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQ-GLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVL- 102 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCC-CEEECTTCCEEEEETTTEEEEECTTCSCCEEC-
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcc-eeEECCCCCEEEEcCCCEEEEEeCCCceEeee-
Confidence 999999999999999 85 678999999 33 3332222 235688 99999999999998766799999655 3322
Q ss_pred eecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEE-ecCCCCccceEEccCCC
Q 017520 153 SYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLV-ADGFYFANGVALSRDED 231 (370)
Q Consensus 153 ~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~-~~~~~~p~gi~~~~dg~ 231 (370)
....+..+++++++++|++|+++. ..++|++++..+...... ...+..|++++++++|+
T Consensus 103 ---~~~~~~~p~~i~~~~~g~l~v~~~-----------------~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~ 162 (270)
T 1rwi_B 103 ---PFDGLNYPEGLAVDTQGAVYVADR-----------------GNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGN 162 (270)
T ss_dssp ---CCCSCSSEEEEEECTTCCEEEEEG-----------------GGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCC
T ss_pred ---ecCCcCCCcceEECCCCCEEEEEC-----------------CCCEEEEEECCCceeEeeccccCCCceeEEEeCCCC
Confidence 112235788999999999999975 346899998765443332 23456899999999998
Q ss_pred EEEEEeCCc--EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCCEEEEEecCchhHHHhhhcchhHHHHHHhCCcccc
Q 017520 232 YVVVCESWK--CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFS 309 (370)
Q Consensus 232 ~l~v~~~~~--l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (370)
+|+++... |.+|+.++.. ...........|.++++|++|++|++....
T Consensus 163 -l~v~~~~~~~i~~~~~~~~~---~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~-------------------------- 212 (270)
T 1rwi_B 163 -VYVTDTDNNRVVKLEAESNN---QVVLPFTDITAPWGIAVDEAGTVYVTEHNT-------------------------- 212 (270)
T ss_dssp -EEEEEGGGTEEEEECTTTCC---EEECCCSSCCSEEEEEECTTCCEEEEETTT--------------------------
T ss_pred -EEEEECCCCEEEEEecCCCc---eEeecccCCCCceEEEECCCCCEEEEECCC--------------------------
Confidence 99998754 9999976542 111111111458899999999999998654
Q ss_pred ccccCCCceEEEEECCCCcEEEEEeCCCCCccccceeEEEE-CCEEEEEeCCCCeEEEEeCC
Q 017520 310 QFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQLS 370 (370)
Q Consensus 310 ~~~~~~~~g~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~-~g~L~~gs~~~~~i~~~~~~ 370 (370)
+.|.+++++++....+.. .+ ...+..+... +|+||+++..++.|.+++++
T Consensus 213 --------~~v~~~~~~~~~~~~~~~-~~--~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~ 263 (270)
T 1rwi_B 213 --------NQVVKLLAGSTTSTVLPF-TG--LNTPLAVAVDSDRTVYVADRGNDRVVKLTSL 263 (270)
T ss_dssp --------SCEEEECTTCSCCEECCC-CS--CSCEEEEEECTTCCEEEEEGGGTEEEEECCC
T ss_pred --------CcEEEEcCCCCcceeecc-CC--CCCceeEEECCCCCEEEEECCCCEEEEEcCC
Confidence 348999998876654322 22 2345566554 58999999999999999864
No 11
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.87 E-value=4.9e-20 Score=169.87 Aligned_cols=243 Identities=19% Similarity=0.265 Sum_probs=173.0
Q ss_pred cCCCcceEEcCCCcEEEEe-cCCeEEEEe--CCeEEEEE-ecCCCceeceEEcCCCcEEEEeCCC-----ceEEEcC-CC
Q 017520 78 VNHPEDASMDKNGVIYTAT-RDGWIKRLQ--DGTWVNWK-FIDSQTLVGLTSTKEGHLIICDNAN-----GLHKVSE-DG 147 (370)
Q Consensus 78 ~~~P~~i~~d~~G~l~v~~-~~g~I~~~~--~g~~~~~~-~~~~~p~~gl~~d~~G~L~v~~~~~-----gi~~~~~-~g 147 (370)
...|+++++|++|+||+++ .+++|++++ ++++..+. .....|. +++++++|++|+++... +|++++. ++
T Consensus 44 ~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~-~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~ 122 (333)
T 2dg1_A 44 GLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPA-AIKIHKDGRLFVCYLGDFKSTGGIFAATENGD 122 (333)
T ss_dssp CCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEE-EEEECTTSCEEEEECTTSSSCCEEEEECTTSC
T ss_pred CccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcc-eEEECCCCcEEEEeCCCCCCCceEEEEeCCCC
Confidence 5679999999999999865 678999999 56766654 3456788 99999999999998654 7999994 44
Q ss_pred -eEEEEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecCCCCccceEE
Q 017520 148 -VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVAL 226 (370)
Q Consensus 148 -~~~~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~p~gi~~ 226 (370)
.+.+.... .....++++++|++|++|+++.... .....++|+++|+++++.+.+......++++++
T Consensus 123 ~~~~~~~~~--~~~~~~~~i~~d~~g~l~v~~~~~~-----------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~ 189 (333)
T 2dg1_A 123 NLQDIIEDL--STAYCIDDMVFDSKGGFYFTDFRGY-----------STNPLGGVYYVSPDFRTVTPIIQNISVANGIAL 189 (333)
T ss_dssp SCEEEECSS--SSCCCEEEEEECTTSCEEEEECCCB-----------TTBCCEEEEEECTTSCCEEEEEEEESSEEEEEE
T ss_pred EEEEEEccC--ccCCcccceEECCCCCEEEEecccc-----------ccCCCceEEEEeCCCCEEEEeecCCCcccceEE
Confidence 54332211 1235788999999999999975210 011357899999987777666666667999999
Q ss_pred ccCCCEEEEEeCCc--EEEEEeCCC--CCCce--eeeccCCC--CCCCceeECCCCCEEEEEecCchhHHHhhhcchhHH
Q 017520 227 SRDEDYVVVCESWK--CRKYWLKGE--RKGKL--ETFAENLP--GAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIK 298 (370)
Q Consensus 227 ~~dg~~l~v~~~~~--l~~~~~~~~--~~~~~--~~~~~~~~--g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~ 298 (370)
++||+.+|+++... |++|+++.. ..... ..+. ... ..|+++++|++|++|+++...
T Consensus 190 ~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~-~~~~~~~~~~i~~d~~G~l~v~~~~~--------------- 253 (333)
T 2dg1_A 190 STDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPY-YFTGHEGPDSCCIDSDDNLYVAMYGQ--------------- 253 (333)
T ss_dssp CTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEE-ECCSSSEEEEEEEBTTCCEEEEEETT---------------
T ss_pred CCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEE-ecCCCCCCCceEECCCCCEEEEEcCC---------------
Confidence 99999899998644 999998532 11111 1111 111 368999999999999998653
Q ss_pred HHHHhCCccccccccCCCceEEEEECCCCcEEEEEeCCCCC--ccccceeEEEE-C-CEEEEEeCCC-----CeEEEEeC
Q 017520 299 HVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQ--LMSFVTSGLQV-D-NHLYVISLTS-----NFIGKVQL 369 (370)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~g~v~~~~~~g~~~~~~~~~~g~--~~~~~t~~~~~-~-g~L~~gs~~~-----~~i~~~~~ 369 (370)
+.|.++|++|+.+..+..+... ....++.+... + ++||+++..+ ..|.++++
T Consensus 254 -------------------~~v~~~d~~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g~~~~~~~l~~~~~ 314 (333)
T 2dg1_A 254 -------------------GRVLVFNKRGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNG 314 (333)
T ss_dssp -------------------TEEEEECTTSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECGGGTCCEEEEEEEC
T ss_pred -------------------CEEEEECCCCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCccCCCCCceEEEEec
Confidence 3589999999999888765320 11134444443 4 5899998874 36666654
No 12
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.87 E-value=2.3e-19 Score=165.75 Aligned_cols=240 Identities=17% Similarity=0.164 Sum_probs=173.9
Q ss_pred CceEecCCCcCCCcceEEcCC-CcEEEEe-cCCeEEEEe--CCeEEEEEecCCCceeceEEcCCCcEEEEeCCCceEEEc
Q 017520 69 DFIKVGEGSVNHPEDASMDKN-GVIYTAT-RDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGHLIICDNANGLHKVS 144 (370)
Q Consensus 69 ~~~~~~~~~~~~P~~i~~d~~-G~l~v~~-~~g~I~~~~--~g~~~~~~~~~~~p~~gl~~d~~G~L~v~~~~~gi~~~~ 144 (370)
+++.+......-+|+.+++++ +.+|+.+ .+++|++++ +++...+. ....+. +++++++|++|++. ..+|++++
T Consensus 39 ~~~~~~~~~~~~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~-~~~~v~-~i~~~~dg~l~v~~-~~gl~~~d 115 (326)
T 2ghs_A 39 AGRVLDETPMLLGEGPTFDPASGTAWWFNILERELHELHLASGRKTVHA-LPFMGS-ALAKISDSKQLIAS-DDGLFLRD 115 (326)
T ss_dssp CCEEEECSCCSBEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEEE-CSSCEE-EEEEEETTEEEEEE-TTEEEEEE
T ss_pred ceEEeeccCCCCCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEEEE-CCCcce-EEEEeCCCeEEEEE-CCCEEEEE
Confidence 345566554556889999985 6777776 678999999 55665553 345678 99999999999987 56899999
Q ss_pred -CCC-eEEEEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecCCCCcc
Q 017520 145 -EDG-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFAN 222 (370)
Q Consensus 145 -~~g-~~~~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~p~ 222 (370)
.+| ++.+.....+.+...++++++|++|++|+++.... +....++|++++ + ++.+.+......++
T Consensus 116 ~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~-----------~~~~~~~l~~~~-~-g~~~~~~~~~~~~~ 182 (326)
T 2ghs_A 116 TATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRK-----------AETGAGSIYHVA-K-GKVTKLFADISIPN 182 (326)
T ss_dssp TTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETT-----------CCTTCEEEEEEE-T-TEEEEEEEEESSEE
T ss_pred CCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCc-----------CCCCceEEEEEe-C-CcEEEeeCCCcccC
Confidence 567 66554332223345789999999999999974210 012357899999 4 77766666667899
Q ss_pred ceEEccCCCEEEEEeCCc--EEEEEeC--CC-CCCceeeecc--CCCCCCCceeECCCCCEEEEEecCchhHHHhhhcch
Q 017520 223 GVALSRDEDYVVVCESWK--CRKYWLK--GE-RKGKLETFAE--NLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSK 295 (370)
Q Consensus 223 gi~~~~dg~~l~v~~~~~--l~~~~~~--~~-~~~~~~~~~~--~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~ 295 (370)
++++++|++.+|++++.. |++|+++ +. .....+.+.. ...+.|+++++|++|++|+++...
T Consensus 183 ~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~------------ 250 (326)
T 2ghs_A 183 SICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGE------------ 250 (326)
T ss_dssp EEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETT------------
T ss_pred CeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCC------------
Confidence 999999999999998754 9999985 33 3322233321 234578999999999999998754
Q ss_pred hHHHHHHhCCccccccccCCCceEEEEECCCCcEEEEEeCCCCCccccceeEEEE--C-CEEEEEeCCCC
Q 017520 296 LIKHVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQV--D-NHLYVISLTSN 362 (370)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~--~-g~L~~gs~~~~ 362 (370)
+.|.+++++|+.+..+..+.. .++.+... + +.||+++..+.
T Consensus 251 ----------------------~~v~~~d~~g~~~~~i~~~~~----~~~~~af~g~d~~~L~vt~~~~~ 294 (326)
T 2ghs_A 251 ----------------------GAVDRYDTDGNHIARYEVPGK----QTTCPAFIGPDASRLLVTSAREH 294 (326)
T ss_dssp ----------------------TEEEEECTTCCEEEEEECSCS----BEEEEEEESTTSCEEEEEEBCTT
T ss_pred ----------------------CEEEEECCCCCEEEEEECCCC----CcEEEEEecCCCCEEEEEecCCC
Confidence 358999999999888876542 35666654 3 68999987763
No 13
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.86 E-value=3e-19 Score=161.34 Aligned_cols=226 Identities=15% Similarity=0.197 Sum_probs=166.1
Q ss_pred cCCCcceEEcCCCcEEEEec-CCeEEEEe-CCeEEEEEec--CCCceeceEEcCCCcEEEEeCC-CceEEEcCCC-eEEE
Q 017520 78 VNHPEDASMDKNGVIYTATR-DGWIKRLQ-DGTWVNWKFI--DSQTLVGLTSTKEGHLIICDNA-NGLHKVSEDG-VENF 151 (370)
Q Consensus 78 ~~~P~~i~~d~~G~l~v~~~-~g~I~~~~-~g~~~~~~~~--~~~p~~gl~~d~~G~L~v~~~~-~gi~~~~~~g-~~~~ 151 (370)
...|.+|++|++|++|+++. +++|++++ +|+...+... ...|. +++++++|++|+++.. .+|++++.+| +..+
T Consensus 61 ~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~g~~~~~~~~~~~~~~~-~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~ 139 (300)
T 2qc5_A 61 DAKVMCLIVSSLGDIWFTENGANKIGKLSKKGGFTEYPLPQPDSGPY-GITEGLNGDIWFTQLNGDRIGKLTADGTIYEY 139 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEE-EEEECSTTCEEEEETTTTEEEEECTTSCEEEE
T ss_pred CCcceeEEECCCCCEEEEecCCCeEEEECCCCCeEEecCCCCCCCCc-cceECCCCCEEEEccCCCeEEEECCCCCEEEc
Confidence 46899999999999999984 68899999 8777655432 35688 9999999999999874 5799999657 5543
Q ss_pred EeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEe--cCCCCccceEEccC
Q 017520 152 LSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA--DGFYFANGVALSRD 229 (370)
Q Consensus 152 ~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~--~~~~~p~gi~~~~d 229 (370)
.. . .....++++++|++|++|+++. ..++|+++|++ ++...+. .....|.+++++++
T Consensus 140 ~~--~-~~~~~~~~i~~d~~g~l~v~~~-----------------~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~ 198 (300)
T 2qc5_A 140 DL--P-NKGSYPAFITLGSDNALWFTEN-----------------QNNSIGRITNT-GKLEEYPLPTNAAAPVGITSGND 198 (300)
T ss_dssp EC--S-STTCCEEEEEECTTSSEEEEET-----------------TTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTT
T ss_pred cC--C-CCCCCceeEEECCCCCEEEEec-----------------CCCeEEEECCC-CcEEEeeCCCCCCCcceEEECCC
Confidence 21 1 1235789999999999999975 24689999984 5555443 34567899999999
Q ss_pred CCEEEEEeCCc--EEEEEeCCCCCCceeee-ccCCCCCCCceeECCCCCEEEEEecCchhHHHhhhcchhHHHHHHhCCc
Q 017520 230 EDYVVVCESWK--CRKYWLKGERKGKLETF-AENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPK 306 (370)
Q Consensus 230 g~~l~v~~~~~--l~~~~~~~~~~~~~~~~-~~~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (370)
|+ +|+++... |.+|+.++ ....+ .......|.++++|++|++|+++...
T Consensus 199 g~-l~v~~~~~~~i~~~~~~g----~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~----------------------- 250 (300)
T 2qc5_A 199 GA-LWFVEIMGNKIGRITTTG----EISEYDIPTPNARPHAITAGKNSEIWFTEWGA----------------------- 250 (300)
T ss_dssp SS-EEEEETTTTEEEEECTTC----CEEEEECSSTTCCEEEEEECSTTCEEEEETTT-----------------------
T ss_pred CC-EEEEccCCCEEEEEcCCC----cEEEEECCCCCCCceEEEECCCCCEEEeccCC-----------------------
Confidence 97 89988654 99998643 22222 11122458889999999999998653
Q ss_pred cccccccCCCceEEEEECCCCcEEEEEeCCCCCccccceeEEEE-CCEEEEEeCCCCeEEEEeC
Q 017520 307 LFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQL 369 (370)
Q Consensus 307 ~~~~~~~~~~~g~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~-~g~L~~gs~~~~~i~~~~~ 369 (370)
+.|.+++++|++. .+..+.+. ..+..+... +|+||+++. + .|.+++.
T Consensus 251 -----------~~i~~~~~~g~~~-~~~~~~~~--~~~~~i~~~~~g~l~v~~~-~-~i~~~~p 298 (300)
T 2qc5_A 251 -----------NQIGRITNDNTIQ-EYQLQTEN--AEPHGITFGKDGSVWFALK-C-KIGKLNL 298 (300)
T ss_dssp -----------TEEEEECTTSCEE-EEECCSTT--CCCCCEEECTTSCEEEECS-S-EEEEEEE
T ss_pred -----------CeEEEECCCCcEE-EEECCccC--CccceeEeCCCCCEEEEcc-C-ceEEeCC
Confidence 3589999987665 45444332 234555554 689999998 6 8888875
No 14
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.86 E-value=5.3e-19 Score=159.73 Aligned_cols=228 Identities=17% Similarity=0.238 Sum_probs=169.2
Q ss_pred cCCCcceEEcCCCcEEEEe-cCCeEEEEe-CCeEEEEEec--CCCceeceEEcCCCcEEEEeCC-CceEEEcCCC-eEEE
Q 017520 78 VNHPEDASMDKNGVIYTAT-RDGWIKRLQ-DGTWVNWKFI--DSQTLVGLTSTKEGHLIICDNA-NGLHKVSEDG-VENF 151 (370)
Q Consensus 78 ~~~P~~i~~d~~G~l~v~~-~~g~I~~~~-~g~~~~~~~~--~~~p~~gl~~d~~G~L~v~~~~-~gi~~~~~~g-~~~~ 151 (370)
...|++|++|++|++|+++ .+++|.+++ ++++..+... ...|. +++++++|++|+++.. ++|++++.+| ...+
T Consensus 19 ~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~g~l~v~~~~~~~v~~~d~~g~~~~~ 97 (300)
T 2qc5_A 19 DSGPYGITSSEDGKVWFTQHKANKISSLDQSGRIKEFEVPTPDAKVM-CLIVSSLGDIWFTENGANKIGKLSKKGGFTEY 97 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEE-EEEECTTSCEEEEETTTTEEEEECTTSCEEEE
T ss_pred CCCcceeeECCCCCEEEEcCCCCeEEEECCCCceEEEECCCCCCcce-eEEECCCCCEEEEecCCCeEEEECCCCCeEEe
Confidence 5789999999999999999 578999999 7776665432 35688 9999999999999875 5699999657 5443
Q ss_pred EeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEe--cCCCCccceEEccC
Q 017520 152 LSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA--DGFYFANGVALSRD 229 (370)
Q Consensus 152 ~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~--~~~~~p~gi~~~~d 229 (370)
... . ....+++++++++|++|+++. ..+.|+++|++ ++...+. .....|++++++++
T Consensus 98 ~~~--~-~~~~~~~i~~~~~g~l~v~~~-----------------~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~ 156 (300)
T 2qc5_A 98 PLP--Q-PDSGPYGITEGLNGDIWFTQL-----------------NGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSD 156 (300)
T ss_dssp ECS--S-TTCCEEEEEECSTTCEEEEET-----------------TTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTT
T ss_pred cCC--C-CCCCCccceECCCCCEEEEcc-----------------CCCeEEEECCC-CCEEEccCCCCCCCceeEEECCC
Confidence 221 1 125788999999999999975 24689999998 6555432 24567899999999
Q ss_pred CCEEEEEeCCc--EEEEEeCCCCCCceeeec-cCCCCCCCceeECCCCCEEEEEecCchhHHHhhhcchhHHHHHHhCCc
Q 017520 230 EDYVVVCESWK--CRKYWLKGERKGKLETFA-ENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPK 306 (370)
Q Consensus 230 g~~l~v~~~~~--l~~~~~~~~~~~~~~~~~-~~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (370)
|+ +|+++... |++|+.++ +...+. ......|.++++|++|++|+++...
T Consensus 157 g~-l~v~~~~~~~i~~~~~~g----~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~----------------------- 208 (300)
T 2qc5_A 157 NA-LWFTENQNNSIGRITNTG----KLEEYPLPTNAAAPVGITSGNDGALWFVEIMG----------------------- 208 (300)
T ss_dssp SS-EEEEETTTTEEEEECTTC----CEEEEECSSTTCCEEEEEECTTSSEEEEETTT-----------------------
T ss_pred CC-EEEEecCCCeEEEECCCC----cEEEeeCCCCCCCcceEEECCCCCEEEEccCC-----------------------
Confidence 98 99998744 99998743 222222 1222358899999999999998654
Q ss_pred cccccccCCCceEEEEECCCCcEEEEEeCCCCCccccceeEEEE-CCEEEEEeCCCCeEEEEeC
Q 017520 307 LFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQL 369 (370)
Q Consensus 307 ~~~~~~~~~~~g~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~-~g~L~~gs~~~~~i~~~~~ 369 (370)
+.+.+++++|+.... ..+.+ ...+..+... +|+||+++...+.|.+++.
T Consensus 209 -----------~~i~~~~~~g~~~~~-~~~~~--~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~ 258 (300)
T 2qc5_A 209 -----------NKIGRITTTGEISEY-DIPTP--NARPHAITAGKNSEIWFTEWGANQIGRITN 258 (300)
T ss_dssp -----------TEEEEECTTCCEEEE-ECSST--TCCEEEEEECSTTCEEEEETTTTEEEEECT
T ss_pred -----------CEEEEEcCCCcEEEE-ECCCC--CCCceEEEECCCCCEEEeccCCCeEEEECC
Confidence 458999998876653 33222 2334555554 6899999999899998874
No 15
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.86 E-value=8.4e-19 Score=158.31 Aligned_cols=228 Identities=15% Similarity=0.256 Sum_probs=168.0
Q ss_pred cCCCcceEEcCCCcEEEEec-CCeEEEEe-CCeEEEEEe--cCCCceeceEEcCCCcEEEEeCC-CceEEEcCCC-eEEE
Q 017520 78 VNHPEDASMDKNGVIYTATR-DGWIKRLQ-DGTWVNWKF--IDSQTLVGLTSTKEGHLIICDNA-NGLHKVSEDG-VENF 151 (370)
Q Consensus 78 ~~~P~~i~~d~~G~l~v~~~-~g~I~~~~-~g~~~~~~~--~~~~p~~gl~~d~~G~L~v~~~~-~gi~~~~~~g-~~~~ 151 (370)
...|.+|++|++|++|+++. +++|.+++ ++++..+.. ....|. +++++++|++|+++.. ++|++++.++ ++.+
T Consensus 14 ~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~-~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~ 92 (299)
T 2z2n_A 14 DTGPYGITVSDKGKVWITQHKANMISCINLDGKITEYPLPTPDAKVM-CLTISSDGEVWFTENAANKIGRITKKGIIKEY 92 (299)
T ss_dssp SCCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEECSSTTCCEE-EEEECTTSCEEEEETTTTEEEEECTTSCEEEE
T ss_pred CCCccceEECCCCCEEEEecCCCcEEEEcCCCCeEEecCCcccCcee-eEEECCCCCEEEeCCCCCeEEEECCCCcEEEE
Confidence 56899999999999999995 68899999 877666542 245688 9999999999999874 5699999667 5544
Q ss_pred EeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEe--cCCCCccceEEccC
Q 017520 152 LSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA--DGFYFANGVALSRD 229 (370)
Q Consensus 152 ~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~--~~~~~p~gi~~~~d 229 (370)
... .....+++++++++|++|+++. ..++|+++|+ +++...+. .....|++++++++
T Consensus 93 ~~~---~~~~~~~~i~~~~~g~l~v~~~-----------------~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~ 151 (299)
T 2z2n_A 93 TLP---NPDSAPYGITEGPNGDIWFTEM-----------------NGNRIGRITD-DGKIREYELPNKGSYPSFITLGSD 151 (299)
T ss_dssp ECS---STTCCEEEEEECTTSCEEEEET-----------------TTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTT
T ss_pred eCC---CcCCCceeeEECCCCCEEEEec-----------------CCceEEEECC-CCCEEEecCCCCCCCCceEEEcCC
Confidence 321 1235788999999999999975 2468999999 45555443 23567899999999
Q ss_pred CCEEEEEeCC-c-EEEEEeCCCCCCceeee-ccCCCCCCCceeECCCCCEEEEEecCchhHHHhhhcchhHHHHHHhCCc
Q 017520 230 EDYVVVCESW-K-CRKYWLKGERKGKLETF-AENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPK 306 (370)
Q Consensus 230 g~~l~v~~~~-~-l~~~~~~~~~~~~~~~~-~~~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (370)
|+ +|+++.. + |++++.++ +...+ .......|.++++|++|++|+++...
T Consensus 152 g~-l~v~~~~~~~i~~~~~~g----~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~----------------------- 203 (299)
T 2z2n_A 152 NA-LWFTENQNNAIGRITESG----DITEFKIPTPASGPVGITKGNDDALWFVEIIG----------------------- 203 (299)
T ss_dssp SC-EEEEETTTTEEEEECTTC----CEEEEECSSTTCCEEEEEECTTSSEEEEETTT-----------------------
T ss_pred CC-EEEEeCCCCEEEEEcCCC----cEEEeeCCCCCCcceeEEECCCCCEEEEccCC-----------------------
Confidence 97 8888764 3 99998732 23322 11222357889999999999998643
Q ss_pred cccccccCCCceEEEEECCCCcEEEEEeCCCCCccccceeEEEE-CCEEEEEeCCCCeEEEEeC
Q 017520 307 LFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQL 369 (370)
Q Consensus 307 ~~~~~~~~~~~g~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~-~g~L~~gs~~~~~i~~~~~ 369 (370)
+.+.+++++|+... +..+.. ...+..+... +|+||+++...+.|.+++.
T Consensus 204 -----------~~i~~~~~~g~~~~-~~~~~~--~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~ 253 (299)
T 2z2n_A 204 -----------NKIGRITTSGEITE-FKIPTP--NARPHAITAGAGIDLWFTEWGANKIGRLTS 253 (299)
T ss_dssp -----------TEEEEECTTCCEEE-EECSST--TCCEEEEEECSTTCEEEEETTTTEEEEEET
T ss_pred -----------ceEEEECCCCcEEE-EECCCC--CCCceeEEECCCCCEEEeccCCceEEEECC
Confidence 35899999777543 543322 2345556554 6899999988899998874
No 16
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.85 E-value=2.1e-19 Score=172.29 Aligned_cols=236 Identities=13% Similarity=0.097 Sum_probs=173.6
Q ss_pred CcCCCcceEEcC--CCcEEEEecCCeEEEEe-C-CeEEEEEecCCCceeceEEcCCCc-EEEEeCCC-----ceEEEcCC
Q 017520 77 SVNHPEDASMDK--NGVIYTATRDGWIKRLQ-D-GTWVNWKFIDSQTLVGLTSTKEGH-LIICDNAN-----GLHKVSED 146 (370)
Q Consensus 77 ~~~~P~~i~~d~--~G~l~v~~~~g~I~~~~-~-g~~~~~~~~~~~p~~gl~~d~~G~-L~v~~~~~-----gi~~~~~~ 146 (370)
.+..|.+|++|+ +|+||+++..++|.+++ + +.+..+......|. +|+++++|+ ||+++... .++.++++
T Consensus 135 ~~~~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~~~P~-~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~ 213 (430)
T 3tc9_A 135 GFGGAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSKVR-TICWTHEADSMIITNDQNNNDRPNNYILTRE 213 (430)
T ss_dssp CCSCCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEECCCSCEE-EEEECTTSSEEEEEECCSCTTSEEEEEEEGG
T ss_pred CCCCCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEecCCCCcc-eEEEeCCCCEEEEEeCCCCcccceEEEEeCC
Confidence 477999999995 69999999668999999 4 56777766677899 999999998 99999742 35666655
Q ss_pred C-eE---EEEeecCCcccccccceEEcC-CCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEe--cCCC
Q 017520 147 G-VE---NFLSYVNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA--DGFY 219 (370)
Q Consensus 147 g-~~---~~~~~~~g~~~~~~~~l~~d~-~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~--~~~~ 219 (370)
| +. .+. .+..|+++++++ +|+||++|. ..++|++++++++....+. ....
T Consensus 214 g~~~~~~~l~------~~~~p~giavdp~~g~lyv~d~-----------------~~~~V~~~~~~~~~~~~~~~~~~~~ 270 (430)
T 3tc9_A 214 SGFKVITELT------KGQNCNGAETHPINGELYFNSW-----------------NAGQVFRYDFTTQETTPLFTIQDSG 270 (430)
T ss_dssp GTSCSEEEEE------ECSSCCCEEECTTTCCEEEEET-----------------TTTEEEEEETTTTEEEEEEECSSSS
T ss_pred Cceeeeeeec------cCCCceEEEEeCCCCEEEEEEC-----------------CCCEEEEEECCCCcEEEEEEcCCCC
Confidence 5 32 221 246899999999 899999986 3579999999877663332 2345
Q ss_pred CccceEEccCCCEEEEEeCCc--EEEEEeCCC--CCCceeeeccC--C------------CCCCC-ceeE--------CC
Q 017520 220 FANGVALSRDEDYVVVCESWK--CRKYWLKGE--RKGKLETFAEN--L------------PGAPD-NINL--------AP 272 (370)
Q Consensus 220 ~p~gi~~~~dg~~l~v~~~~~--l~~~~~~~~--~~~~~~~~~~~--~------------~g~p~-~i~~--------d~ 272 (370)
.|++++++++|+.+|+++... |++++.++. .......+... . -..|. ++++ |+
T Consensus 271 ~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~ 350 (430)
T 3tc9_A 271 WEFHIQFHPSGNYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSD 350 (430)
T ss_dssp CCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSC
T ss_pred cceeEEEcCCCCEEEEEECCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCC
Confidence 799999999999999999876 999988753 11111122111 0 11366 7777 56
Q ss_pred CCCEEEEEecCchhHHHhhhcchhHHHHHHhCCccccccccCCCceEEEEECCCCcEEEEEeCC--------CC-----C
Q 017520 273 DGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDP--------TG-----Q 339 (370)
Q Consensus 273 ~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~g~~~~~~~~~--------~g-----~ 339 (370)
+|+||++...+ ..|.+++++|++....... +| .
T Consensus 351 ~g~lyvaD~~n----------------------------------~~I~~i~~~G~v~~~~g~g~~~~~G~~dG~~~~~~ 396 (430)
T 3tc9_A 351 EYDFYFCDREN----------------------------------HCIRILTPQGRVTTFAGRGSNGTSGYNDGDLRQEA 396 (430)
T ss_dssp CEEEEEEEGGG----------------------------------TEEEEECTTSEEEEEEECCTTSSSSCBCEETTTTC
T ss_pred CCeEEEEECCC----------------------------------cEEEEECCCCcEEEEEeCCCCCCCcccCCCchhhc
Confidence 79999999765 4689999999877766431 22 1
Q ss_pred ccccceeEEEE--CCEEEEEeCCCCeEEEEeCC
Q 017520 340 LMSFVTSGLQV--DNHLYVISLTSNFIGKVQLS 370 (370)
Q Consensus 340 ~~~~~t~~~~~--~g~L~~gs~~~~~i~~~~~~ 370 (370)
.++....+... +|+||++...++.|.++.++
T Consensus 397 ~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 397 RFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp BCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred EeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 24456666665 58999999999999999864
No 17
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.85 E-value=7.2e-19 Score=158.76 Aligned_cols=227 Identities=15% Similarity=0.202 Sum_probs=166.0
Q ss_pred cCCCcceEEcCCCcEEEEec-CCeEEEEe-CCeEEEEEe--cCCCceeceEEcCCCcEEEEeCC-CceEEEcCCC-eEEE
Q 017520 78 VNHPEDASMDKNGVIYTATR-DGWIKRLQ-DGTWVNWKF--IDSQTLVGLTSTKEGHLIICDNA-NGLHKVSEDG-VENF 151 (370)
Q Consensus 78 ~~~P~~i~~d~~G~l~v~~~-~g~I~~~~-~g~~~~~~~--~~~~p~~gl~~d~~G~L~v~~~~-~gi~~~~~~g-~~~~ 151 (370)
...|.+|++|++|++|+++. +++|++++ +++++.+.. ....|. +++++++|+||+++.. .+|++++++| ...+
T Consensus 56 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~-~i~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~ 134 (299)
T 2z2n_A 56 DAKVMCLTISSDGEVWFTENAANKIGRITKKGIIKEYTLPNPDSAPY-GITEGPNGDIWFTEMNGNRIGRITDDGKIREY 134 (299)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEE-EEEECTTSCEEEEETTTTEEEEECTTCCEEEE
T ss_pred cCceeeEEECCCCCEEEeCCCCCeEEEECCCCcEEEEeCCCcCCCce-eeEECCCCCEEEEecCCceEEEECCCCCEEEe
Confidence 35799999999999999984 68899999 777766653 345788 9999999999999864 5799999766 5543
Q ss_pred EeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEE--ecCCCCccceEEccC
Q 017520 152 LSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLV--ADGFYFANGVALSRD 229 (370)
Q Consensus 152 ~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~--~~~~~~p~gi~~~~d 229 (370)
... .....++++++|++|++|+++. ..+.|+++|+ +++...+ ......|.+++++++
T Consensus 135 ~~~---~~~~~~~~i~~~~~g~l~v~~~-----------------~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~ 193 (299)
T 2z2n_A 135 ELP---NKGSYPSFITLGSDNALWFTEN-----------------QNNAIGRITE-SGDITEFKIPTPASGPVGITKGND 193 (299)
T ss_dssp ECS---STTCCEEEEEECTTSCEEEEET-----------------TTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTT
T ss_pred cCC---CCCCCCceEEEcCCCCEEEEeC-----------------CCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCC
Confidence 221 1235788999999999999975 3468999999 5666544 234567899999999
Q ss_pred CCEEEEEeCCc--EEEEEeCCCCCCceeee-ccCCCCCCCceeECCCCCEEEEEecCchhHHHhhhcchhHHHHHHhCCc
Q 017520 230 EDYVVVCESWK--CRKYWLKGERKGKLETF-AENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPK 306 (370)
Q Consensus 230 g~~l~v~~~~~--l~~~~~~~~~~~~~~~~-~~~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (370)
|+ +|+++... |.+|+.++ ....+ .......|.++++|++|++|+++...
T Consensus 194 g~-l~v~~~~~~~i~~~~~~g----~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~----------------------- 245 (299)
T 2z2n_A 194 DA-LWFVEIIGNKIGRITTSG----EITEFKIPTPNARPHAITAGAGIDLWFTEWGA----------------------- 245 (299)
T ss_dssp SS-EEEEETTTTEEEEECTTC----CEEEEECSSTTCCEEEEEECSTTCEEEEETTT-----------------------
T ss_pred CC-EEEEccCCceEEEECCCC----cEEEEECCCCCCCceeEEECCCCCEEEeccCC-----------------------
Confidence 98 89988643 99998732 23222 11122458889999999999998553
Q ss_pred cccccccCCCceEEEEECCCCcEEEEEeCCCCCccccceeEEEECCEEEEEeCCCCeEEEEeC
Q 017520 307 LFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIGKVQL 369 (370)
Q Consensus 307 ~~~~~~~~~~~g~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~~g~L~~gs~~~~~i~~~~~ 369 (370)
+.|.+++++|+ +..+..+.+. ..+..+...+|+||+++. .+.|.+++.
T Consensus 246 -----------~~i~~~d~~g~-~~~~~~~~~~--~~~~~i~~~~g~l~v~~~-~~~l~~~~~ 293 (299)
T 2z2n_A 246 -----------NKIGRLTSNNI-IEEYPIQIKS--AEPHGICFDGETIWFAME-CDKIGKLTL 293 (299)
T ss_dssp -----------TEEEEEETTTE-EEEEECSSSS--CCEEEEEECSSCEEEEET-TTEEEEEEE
T ss_pred -----------ceEEEECCCCc-eEEEeCCCCC--CccceEEecCCCEEEEec-CCcEEEEEc
Confidence 35899998775 4455443322 234444446799999986 678888864
No 18
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.84 E-value=2.5e-18 Score=163.80 Aligned_cols=235 Identities=13% Similarity=0.069 Sum_probs=168.5
Q ss_pred CcCCCcceEEcCCCcEEEEe-cCCeEEEEe--CCeEEEEEecCCCceeceEEcCCCc-EEEEeCCC--ceEEEcCC-C-e
Q 017520 77 SVNHPEDASMDKNGVIYTAT-RDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGH-LIICDNAN--GLHKVSED-G-V 148 (370)
Q Consensus 77 ~~~~P~~i~~d~~G~l~v~~-~~g~I~~~~--~g~~~~~~~~~~~p~~gl~~d~~G~-L~v~~~~~--gi~~~~~~-g-~ 148 (370)
.+..|.+|++|++|+||+++ .+++|.+++ ++.+..+......|. ++++++|+ ||+++... .|+++++. + .
T Consensus 129 ~~~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~--ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~ 206 (409)
T 3hrp_A 129 KFKYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGK--PAVTKDKQRVYSIGWEGTHTVYVYMKASGWA 206 (409)
T ss_dssp CCCCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCB--CEECTTSSEEEEEBSSTTCEEEEEEGGGTTC
T ss_pred ccCCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCc--eeEecCCCcEEEEecCCCceEEEEEcCCCce
Confidence 47789999999999999999 568999999 467777765544443 89999886 78888654 69999843 4 3
Q ss_pred -EEEEeecCCcccccccceEEcC-CCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEE----ecCCC--C
Q 017520 149 -ENFLSYVNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLV----ADGFY--F 220 (370)
Q Consensus 149 -~~~~~~~~g~~~~~~~~l~~d~-~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~----~~~~~--~ 220 (370)
..+. .........++++++++ +|+||+++. .++|+++|++++....+ ..+.. .
T Consensus 207 ~~~~g-~~~~~~~~~p~~iav~p~~g~lyv~d~------------------~~~I~~~d~~~~~~~~~~~~~~~g~~~~~ 267 (409)
T 3hrp_A 207 PTRIG-QLGSTFSGKIGAVALDETEEWLYFVDS------------------NKNFGRFNVKTQEVTLIKQLELSGSLGTN 267 (409)
T ss_dssp EEEEE-ECCTTSCSCCCBCEECTTSSEEEEECT------------------TCEEEEEETTTCCEEEEEECCCCSCCCCS
T ss_pred eEEee-eccchhcCCcEEEEEeCCCCeEEEEEC------------------CCcEEEEECCCCCEEEEecccccCCCCCC
Confidence 2331 11111346789999999 789999753 36899999987776655 22222 2
Q ss_pred cc-ceEEccCCCEEEEEeCCc--EEEEEeCCCCCCceeeeccCC--------------CCCCCceeECCCCCEEEEEe-c
Q 017520 221 AN-GVALSRDEDYVVVCESWK--CRKYWLKGERKGKLETFAENL--------------PGAPDNINLAPDGTFWIAII-K 282 (370)
Q Consensus 221 p~-gi~~~~dg~~l~v~~~~~--l~~~~~~~~~~~~~~~~~~~~--------------~g~p~~i~~d~~G~lwv~~~-~ 282 (370)
|. ++++++++..+|+++... |++|+.++. ...+.... -..|.++++|++|++|++.. .
T Consensus 268 P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~----~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~ 343 (409)
T 3hrp_A 268 PGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE----CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFK 343 (409)
T ss_dssp SCCEEEEETTTTEEEEEETTTTEEEEECTTCC----EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTT
T ss_pred ccccEEEeCCCCEEEEEeCCCCEEEEEecCCC----EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCC
Confidence 44 999999766799999876 999987653 22221111 13489999999999999987 5
Q ss_pred CchhHHHhhhcchhHHHHHHhCCccccccccCCCceEEEEEC-CCCcEEEEEeCC------CC----CccccceeEEEE-
Q 017520 283 LDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVA-EDGTIIRNLVDP------TG----QLMSFVTSGLQV- 350 (370)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~-~~g~~~~~~~~~------~g----~~~~~~t~~~~~- 350 (370)
. ..|.+++ ++|++....... +| ..+..+..+...
T Consensus 344 ~----------------------------------~~I~~~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~ 389 (409)
T 3hrp_A 344 G----------------------------------YCLRKLDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDG 389 (409)
T ss_dssp T----------------------------------CEEEEEETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECS
T ss_pred C----------------------------------CEEEEEECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcC
Confidence 5 4689999 778765544331 11 113455666655
Q ss_pred CCEEEEEeCCCCeEEEEeCC
Q 017520 351 DNHLYVISLTSNFIGKVQLS 370 (370)
Q Consensus 351 ~g~L~~gs~~~~~i~~~~~~ 370 (370)
+|+||++...++.|.++.++
T Consensus 390 ~g~lyVad~~n~~Ir~i~~e 409 (409)
T 3hrp_A 390 EGGYWIAEAWGKAIRKYAVE 409 (409)
T ss_dssp SSEEEEEESTTCEEEEEEEC
T ss_pred CCCEEEEECCCCeEEEEEeC
Confidence 59999999999999999874
No 19
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.84 E-value=3.5e-19 Score=164.57 Aligned_cols=240 Identities=13% Similarity=0.138 Sum_probs=163.8
Q ss_pred CCcCCCcceEEcCCCcEEEEecCC-------------------------eEEEEe--CCeEEEEEec--CCCceeceEEc
Q 017520 76 GSVNHPEDASMDKNGVIYTATRDG-------------------------WIKRLQ--DGTWVNWKFI--DSQTLVGLTST 126 (370)
Q Consensus 76 ~~~~~P~~i~~d~~G~l~v~~~~g-------------------------~I~~~~--~g~~~~~~~~--~~~p~~gl~~d 126 (370)
..+..|.+|++|++|++|+++..+ .|++++ +|++...... ...|. +++++
T Consensus 21 ~~l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~-gia~d 99 (329)
T 3fvz_A 21 LLPGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPH-GLSID 99 (329)
T ss_dssp CCCSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEE-EEEEC
T ss_pred eecCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCce-EEEEC
Confidence 446789999999999999998443 699999 5776544332 34799 99999
Q ss_pred CCCcEEEEeCC-CceEEEcCCC-e---EEEEee-cC---CcccccccceEEcC-CCcEEEEeCCCCCCCccceecccccC
Q 017520 127 KEGHLIICDNA-NGLHKVSEDG-V---ENFLSY-VN---GSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGK 196 (370)
Q Consensus 127 ~~G~L~v~~~~-~gi~~~~~~g-~---~~~~~~-~~---g~~~~~~~~l~~d~-~G~l~v~d~~~~~~~~~~~~~~~~~~ 196 (370)
++|+||+++.. +.|++++.+| . ..+... .. ...+..|++|++++ +|++|++++.
T Consensus 100 ~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~---------------- 163 (329)
T 3fvz_A 100 TDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGY---------------- 163 (329)
T ss_dssp TTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECS----------------
T ss_pred CCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCC----------------
Confidence 99999999976 5688888665 2 222110 01 23456799999999 8999999851
Q ss_pred CCceEEEEeCCCCeEEEEe----------cCCCCccceEEccCCCEEEEEeCCc--EEEEEeCCCCCCceeeec-cCCCC
Q 017520 197 PHGQLLKYDPSSNITTLVA----------DGFYFANGVALSRDEDYVVVCESWK--CRKYWLKGERKGKLETFA-ENLPG 263 (370)
Q Consensus 197 ~~g~l~~~d~~t~~~~~~~----------~~~~~p~gi~~~~dg~~l~v~~~~~--l~~~~~~~~~~~~~~~~~-~~~~g 263 (370)
.+++|.+||+++.....+. ..+..|.++++++++..+|+++... |.+|+.++.+. ...+. .....
T Consensus 164 ~~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~--~~~~~~~~~~~ 241 (329)
T 3fvz_A 164 CNSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEF--VREIKHASFGR 241 (329)
T ss_dssp SCCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE--EEEECCTTTTT
T ss_pred CCCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcE--EEEEeccccCC
Confidence 3478999997754444442 1345699999999966699999876 99999872211 12221 11112
Q ss_pred CCCceeECC------CCCEEEEEecCchhHHHhhhcchhHHHHHHhCCccccccccCCCceEEEEEC-CCCcEEEEEeCC
Q 017520 264 APDNINLAP------DGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVA-EDGTIIRNLVDP 336 (370)
Q Consensus 264 ~p~~i~~d~------~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~-~~g~~~~~~~~~ 336 (370)
.+..+++.+ +|++|++.... ..+..++ .+|+++..+...
T Consensus 242 ~~~~~~~~pg~~~~~~g~~~v~~~~~----------------------------------~~v~~~~~~~g~~~~~~~~~ 287 (329)
T 3fvz_A 242 NVFAISYIPGFLFAVNGKPYFGDQEP----------------------------------VQGFVMNFSSGEIIDVFKPV 287 (329)
T ss_dssp CEEEEEEETTEEEEEECCCCTTCSCC----------------------------------CCEEEEETTTCCEEEEECCS
T ss_pred CcceeeecCCEEEEeCCCEEeccCCC----------------------------------cEEEEEEcCCCeEEEEEcCC
Confidence 234444444 55555443322 3477777 679999888643
Q ss_pred CCCccccceeEEEE-CCEEEEEeCCCCeEEEEeC
Q 017520 337 TGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQL 369 (370)
Q Consensus 337 ~g~~~~~~t~~~~~-~g~L~~gs~~~~~i~~~~~ 369 (370)
.+. ...+..+... +|+||++...++.|.++++
T Consensus 288 ~~~-~~~p~~ia~~~dG~lyvad~~~~~I~~~~~ 320 (329)
T 3fvz_A 288 RKH-FDMPHDIVASEDGTVYIGDAHTNTVWKFTL 320 (329)
T ss_dssp SSC-CSSEEEEEECTTSEEEEEESSSCCEEEEEE
T ss_pred CCc-cCCeeEEEECCCCCEEEEECCCCEEEEEeC
Confidence 333 3445566554 5899999999999999975
No 20
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.80 E-value=7.2e-18 Score=156.75 Aligned_cols=239 Identities=15% Similarity=0.154 Sum_probs=161.8
Q ss_pred ceEecCCCcCCCcceEEcCCCcEEEEec---CC--eEEEEeCCeEEEEEe-------cCCCceeceEEcCCCcEEEEeCC
Q 017520 70 FIKVGEGSVNHPEDASMDKNGVIYTATR---DG--WIKRLQDGTWVNWKF-------IDSQTLVGLTSTKEGHLIICDNA 137 (370)
Q Consensus 70 ~~~~~~~~~~~P~~i~~d~~G~l~v~~~---~g--~I~~~~~g~~~~~~~-------~~~~p~~gl~~d~~G~L~v~~~~ 137 (370)
.+.+.... ..|++|+++++|++|++.. ++ +|+.+++|++..+.. ....|+ ++++|++|+|||+|..
T Consensus 9 ~~~v~~~~-~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~~~p~~~~~~~~~~~~p~-gv~~d~~g~L~v~D~g 86 (343)
T 2qe8_A 9 LEVVAELS-LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLIPFPPQSGNAIITFDTVL-GIKSDGNGIVWMLDNG 86 (343)
T ss_dssp CEEEEEES-SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEEESCCCCSSCCCCCSCEE-EEEECSSSEEEEEECH
T ss_pred eEEEEEcC-CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCeecCCCcccCcccceeEee-EEEEcCCCcEEEEcCC
Confidence 34444332 5899999999999999962 34 788888776654421 124689 9999999999999964
Q ss_pred ------CceEEEc-CCC-e-EEEEee-cCCcccccccceEEcC-CCcEEEEeCCCCCCCccceecccccCCCceEEEEeC
Q 017520 138 ------NGLHKVS-EDG-V-ENFLSY-VNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDP 206 (370)
Q Consensus 138 ------~gi~~~~-~~g-~-~~~~~~-~~g~~~~~~~~l~~d~-~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~ 206 (370)
..|++++ .+| + +.+... ....+..+++++++|+ +|.+|++|.+.. ..++|+++|+
T Consensus 87 ~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~--------------~~~~i~v~d~ 152 (343)
T 2qe8_A 87 NQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPD--------------DKAALIRVDL 152 (343)
T ss_dssp HHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSG--------------GGCEEEEEET
T ss_pred CCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccC--------------CCCeEEEEEC
Confidence 5799999 567 3 333211 1122335789999997 479999986310 2357778887
Q ss_pred CCCeEEEEecC------------------------------CCCccceEEccCCCEEEEEeCCc--EEEEEeCC---CCC
Q 017520 207 SSNITTLVADG------------------------------FYFANGVALSRDEDYVVVCESWK--CRKYWLKG---ERK 251 (370)
Q Consensus 207 ~t~~~~~~~~~------------------------------~~~p~gi~~~~dg~~l~v~~~~~--l~~~~~~~---~~~ 251 (370)
++++...+..+ ...++||++++||+.||+++..+ |++++.+. ...
T Consensus 153 ~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~ 232 (343)
T 2qe8_A 153 QTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQL 232 (343)
T ss_dssp TTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTC
T ss_pred CCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCC
Confidence 66655443311 02479999999999999998866 99998531 111
Q ss_pred Cceeeec----cCCCCCCCceeECCCCCEEEEEecCchhHHHhhhcchhHHHHHHhCCccccccccCCCceEEEEECC-C
Q 017520 252 GKLETFA----ENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAE-D 326 (370)
Q Consensus 252 ~~~~~~~----~~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~-~ 326 (370)
...+.+. ....+.|+++++|++|++|++.... +.|.++|+ +
T Consensus 233 ~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~----------------------------------~~V~~~d~~~ 278 (343)
T 2qe8_A 233 TDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAH----------------------------------SAIGVITSAD 278 (343)
T ss_dssp CHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGG----------------------------------TEEEEEETTT
T ss_pred ChhhhhcceEecccCCCCceEEECCCCCEEEEccCC----------------------------------CeEEEEECCC
Confidence 1111110 0123479999999999999998765 46899998 8
Q ss_pred CcEEEEEeCCCCCccccceeEEEE-CCEEEEEeCCC
Q 017520 327 GTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTS 361 (370)
Q Consensus 327 g~~~~~~~~~~g~~~~~~t~~~~~-~g~L~~gs~~~ 361 (370)
|++.....++. ...++.+... +|+||+.+...
T Consensus 279 G~~~~~~~~~~---~~~p~~va~~~~g~l~v~~~~~ 311 (343)
T 2qe8_A 279 RAYKLLVTDEK---LSWTDSFNFGSDGYLYFDCNQL 311 (343)
T ss_dssp TEEEEEEECGG---GSCEEEEEECTTSCEEEEECCG
T ss_pred CCEEEEEECCc---eecCCeeEECCCCcEEEEeCcc
Confidence 88666555432 3456666664 58999997644
No 21
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.79 E-value=2.8e-17 Score=153.40 Aligned_cols=254 Identities=15% Similarity=0.173 Sum_probs=164.4
Q ss_pred CceEecCCCcCCCcceEEcCCCcEEEEecCCeEEEEe-CCeEEEEEe------cCCCceeceEEcCC----CcEEEEeCC
Q 017520 69 DFIKVGEGSVNHPEDASMDKNGVIYTATRDGWIKRLQ-DGTWVNWKF------IDSQTLVGLTSTKE----GHLIICDNA 137 (370)
Q Consensus 69 ~~~~~~~~~~~~P~~i~~d~~G~l~v~~~~g~I~~~~-~g~~~~~~~------~~~~p~~gl~~d~~----G~L~v~~~~ 137 (370)
.+++++.+ +..|++|+++++|+|||++..|+|++++ +|+ +.+.. ..+.|+ ||+++++ |.|||+...
T Consensus 20 ~~~~va~~-l~~P~~ia~~pdG~l~V~e~~g~I~~~d~~G~-~~~~~~~v~~~g~~g~~-gia~~pdf~~~g~lyv~~~~ 96 (354)
T 3a9g_A 20 KISEVASD-LEVPWSIAPLGGGRYLVTERPGRLVLISPSGK-KLVASFDVANVGEAGLL-GLALHPEFPKKSWVYLYASY 96 (354)
T ss_dssp EEEEEECS-CSCEEEEEEEETTEEEEEETTTEEEEECSSCE-EEEEECCCCCSTTCSEE-EEEECTTTTTSCEEEEEEEE
T ss_pred EEEEEeCC-CCCCeEEEEcCCCeEEEEeCCCEEEEEeCCCc-eEeeccceeecCCCcee-eEEeCCCCCcCCEEEEEEec
Confidence 34566665 7899999999999999999889999998 777 54432 234688 9999986 899998763
Q ss_pred --------CceEEEc-CCC------eEEEEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEE
Q 017520 138 --------NGLHKVS-EDG------VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLL 202 (370)
Q Consensus 138 --------~gi~~~~-~~g------~~~~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~ 202 (370)
..|.+++ .++ .+.+....+....+.+++|++++||+|||++..... ... ..-.....++|+
T Consensus 97 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~--~~~--~~d~~~~~G~I~ 172 (354)
T 3a9g_A 97 FAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAAD--PRL--AQDLSSLAGKIL 172 (354)
T ss_dssp ECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTC--GGG--GTCTTCCSSEEE
T ss_pred cCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCC--Ccc--ccCCCCCCeEEE
Confidence 5688888 322 222333223334567899999999999999753110 000 000123457999
Q ss_pred EEeCCCC--------eEEEEecCCCCccceEEcc-CCCEEEEEeCCc-----EEEEEeCCCCCC------------ceee
Q 017520 203 KYDPSSN--------ITTLVADGFYFANGVALSR-DEDYVVVCESWK-----CRKYWLKGERKG------------KLET 256 (370)
Q Consensus 203 ~~d~~t~--------~~~~~~~~~~~p~gi~~~~-dg~~l~v~~~~~-----l~~~~~~~~~~~------------~~~~ 256 (370)
|+++++. ..+++..++.+|+|+++++ +|+ ||+++.+. |.++. .+...+ ....
T Consensus 173 ri~~dG~~p~~npf~~~~i~a~G~rnp~Gla~d~~~g~-l~v~d~g~~~~dei~~i~-~G~nyGwp~~~g~~~~~~~~~p 250 (354)
T 3a9g_A 173 RVDEEGRPPADNPFPNSPIWSYGHRNPQGIDWHRASGV-MVATEHGPVGHDEVNIIL-KGGNYGWPLATGKAGRGEFVDP 250 (354)
T ss_dssp EECTTSCCCTTSSSTTCCEEEECCSCCCEEEECTTTCC-EEEEECCSSSCCEEEEEC-TTCBCCTTTCCSCCCCTTSCCC
T ss_pred EEcCCCCCCCCCCCCCCcEEEEccCCcceEEEeCCCCC-EEEEecCCCCCcEEEEec-CCCcCCCCcccCCCCCCCCcCC
Confidence 9999854 3467788999999999999 565 99999865 44443 121111 0011
Q ss_pred ecc--CCCCCCCceeE-------CCCCCEEEEEecCchhHHHhhhcchhHHHHHHhCCccccccccCCCceEEEEECC--
Q 017520 257 FAE--NLPGAPDNINL-------APDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAE-- 325 (370)
Q Consensus 257 ~~~--~~~g~p~~i~~-------d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~-- 325 (370)
... ....-|.++++ +-+|++|++...+ +.|.+++.
T Consensus 251 ~~~~~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~----------------------------------~~v~~~~~~~ 296 (354)
T 3a9g_A 251 VIDTGSETWAPSGASFVHGDMFPGLRGWLLIACLRG----------------------------------SMLAAVNFGD 296 (354)
T ss_dssp SEECTTCCCCEEEEEECCSSSCGGGTTEEEEEETTT----------------------------------TEEEEEEECG
T ss_pred EeecCCCCcCCcceEEECCCCCcccCCcEEEEEcCC----------------------------------CEEEEEEECC
Confidence 110 11224788888 4678999998654 34566654
Q ss_pred CCcEE--EEEeCCCCCccccceeEEEE-CCEEEEEeCC-CC---------eEEEEe
Q 017520 326 DGTII--RNLVDPTGQLMSFVTSGLQV-DNHLYVISLT-SN---------FIGKVQ 368 (370)
Q Consensus 326 ~g~~~--~~~~~~~g~~~~~~t~~~~~-~g~L~~gs~~-~~---------~i~~~~ 368 (370)
+|++. ..+.. +. ...+..+... +|.||+.+.+ .. .|.|+.
T Consensus 297 ~g~~~~~~~~~~--~~-~~rp~~v~~~pDG~lyv~~~~~~G~g~~~~~~g~i~ri~ 349 (354)
T 3a9g_A 297 NMEVRKISTFFK--NV-FGRLRDVVIDDDGGILISTSNRDGRGSLRAGDDKILKIV 349 (354)
T ss_dssp GGCEEEEEEECT--TT-SCCEEEEEECTTSCEEEEECTTSSSSCCCTTCSCEEEEE
T ss_pred CCcccceeeecc--CC-CCCeeEEEECCCCcEEEEEeCCCCCcCCCCCCCEEEEEe
Confidence 34543 23322 21 2234556554 6899999874 22 788875
No 22
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.79 E-value=2.1e-17 Score=170.46 Aligned_cols=226 Identities=14% Similarity=0.171 Sum_probs=166.4
Q ss_pred CcceEEcCCCcEEEEecCCeEEEEe--CCeEEEEEec---------CCCceeceEEcCCCc-EEEEeCCCceEEEc-CCC
Q 017520 81 PEDASMDKNGVIYTATRDGWIKRLQ--DGTWVNWKFI---------DSQTLVGLTSTKEGH-LIICDNANGLHKVS-EDG 147 (370)
Q Consensus 81 P~~i~~d~~G~l~v~~~~g~I~~~~--~g~~~~~~~~---------~~~p~~gl~~d~~G~-L~v~~~~~gi~~~~-~~g 147 (370)
..+|+.|++|+||+|+.+++|.+++ +++++.+... ..... +++.|++|+ ||++...+||++++ .++
T Consensus 359 V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~-~i~~d~~g~~lWigt~~~Gl~~~d~~~~ 437 (795)
T 4a2l_A 359 VSCIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIK-AVYVDEKKSLVYIGTHAGGLSILHRNSG 437 (795)
T ss_dssp EEEEEECTTSCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEE-EEEEETTTTEEEEEETTTEEEEEETTTC
T ss_pred eEEEEECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEE-EEEEcCCCCEEEEEeCcCceeEEeCCCC
Confidence 4578899999999999887899999 5677766421 23456 889999999 99999878999999 556
Q ss_pred -eEEEEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecC-----C--C
Q 017520 148 -VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG-----F--Y 219 (370)
Q Consensus 148 -~~~~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~-----~--~ 219 (370)
++.+.......+...+..+..|++|+||++.. ++|+++|+++++++.+... + .
T Consensus 438 ~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-------------------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (795)
T 4a2l_A 438 QVENFNQRNSQLVNENVYAILPDGEGNLWLGTL-------------------SALVRFNPEQRSFTTIEKEKDGTPVVSK 498 (795)
T ss_dssp CEEEECTTTSCCSCSCEEEEEECSSSCEEEEES-------------------SCEEEEETTTTEEEECCBCTTCCBCCCC
T ss_pred cEEEeecCCCCcCCCeeEEEEECCCCCEEEEec-------------------CceeEEeCCCCeEEEccccccccccCCc
Confidence 66553221222335678899999999999953 4799999998887765422 1 2
Q ss_pred CccceEEccCCCEEEEEeCCcEEEEEeCCCCCCceeeecc--CCCCC----CCceeECCCCCEEEEEecCchhHHHhhhc
Q 017520 220 FANGVALSRDEDYVVVCESWKCRKYWLKGERKGKLETFAE--NLPGA----PDNINLAPDGTFWIAIIKLDARRMKILNS 293 (370)
Q Consensus 220 ~p~gi~~~~dg~~l~v~~~~~l~~~~~~~~~~~~~~~~~~--~~~g~----p~~i~~d~~G~lwv~~~~~~~~~~~~~~~ 293 (370)
....+..+++|+ +|++...+|++|+.++.+. .+.. ...+. ...|+.|++|++|+++..+
T Consensus 499 ~i~~i~~d~~g~-lWigt~~Gl~~~~~~~~~~----~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~~G---------- 563 (795)
T 4a2l_A 499 QITTLFRDSHKR-LWIGGEEGLSVFKQEGLDI----QKASILPVSNVTKLFTNCIYEASNGIIWVGTREG---------- 563 (795)
T ss_dssp CEEEEEECTTCC-EEEEESSCEEEEEEETTEE----EECCCSCSCGGGGSCEEEEEECTTSCEEEEESSC----------
T ss_pred eEEEEEECCCCC-EEEEeCCceEEEeCCCCeE----EEecCCCCCCCCCCeeEEEEECCCCCEEEEeCCC----------
Confidence 345678889998 8888875699999865432 2210 11122 3347789999999999765
Q ss_pred chhHHHHHHhCCccccccccCCCceEEEEECCCCcEEEEEeCCCCCccccceeEEEE-CCEEEEEeCCCCeEEEEeC
Q 017520 294 SKLIKHVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQL 369 (370)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~-~g~L~~gs~~~~~i~~~~~ 369 (370)
++++|++.+.+..|...+|...+.+.++.++ +|+||+++. +.|.+++.
T Consensus 564 --------------------------l~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lWi~t~--~Gl~~~~~ 612 (795)
T 4a2l_A 564 --------------------------FYCFNEKDKQIKRYNTTNGLPNNVVYGILEDSFGRLWLSTN--RGISCFNP 612 (795)
T ss_dssp --------------------------EEEEETTTTEEEEECGGGTCSCSCEEEEEECTTSCEEEEET--TEEEEEET
T ss_pred --------------------------ceeECCCCCcEEEeCCCCCCchhheEEEEECCCCCEEEEcC--CceEEEcC
Confidence 8999998888888887778766677777766 599999994 56776653
No 23
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.78 E-value=7.2e-17 Score=149.06 Aligned_cols=212 Identities=13% Similarity=0.080 Sum_probs=151.8
Q ss_pred cCCCcceEEcCCCcEEEEe-cCCeEEEEe--CCeEEEEEecCC------CceeceEEcCCCcEEEEeC--CCceEEEc-C
Q 017520 78 VNHPEDASMDKNGVIYTAT-RDGWIKRLQ--DGTWVNWKFIDS------QTLVGLTSTKEGHLIICDN--ANGLHKVS-E 145 (370)
Q Consensus 78 ~~~P~~i~~d~~G~l~v~~-~~g~I~~~~--~g~~~~~~~~~~------~p~~gl~~d~~G~L~v~~~--~~gi~~~~-~ 145 (370)
...|++|+++++|.+|+++ .++.|.+++ ++++........ .|. +|++ .++.|||++. .+.|..++ .
T Consensus 83 ~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~-~i~~-~~~~lyv~~~~~~~~v~viD~~ 160 (328)
T 3dsm_A 83 FTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTE-QMVQ-YGKYVYVNCWSYQNRILKIDTE 160 (328)
T ss_dssp CSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCC-CEEE-ETTEEEEEECTTCCEEEEEETT
T ss_pred CCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcc-eEEE-ECCEEEEEcCCCCCEEEEEECC
Confidence 3689999998889999999 789999999 677665444444 788 9999 5789999986 35789999 5
Q ss_pred CC-eEEEEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEec--CCCCcc
Q 017520 146 DG-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD--GFYFAN 222 (370)
Q Consensus 146 ~g-~~~~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~--~~~~p~ 222 (370)
++ +...... + ..|++++++++|++|+++... +.- .......+.|+++|++++++..... ....|+
T Consensus 161 t~~~~~~i~~--g---~~p~~i~~~~dG~l~v~~~~~-~~~------~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~ 228 (328)
T 3dsm_A 161 TDKVVDELTI--G---IQPTSLVMDKYNKMWTITDGG-YEG------SPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPS 228 (328)
T ss_dssp TTEEEEEEEC--S---SCBCCCEECTTSEEEEEBCCB-CTT------CSSCBCCCEEEEEETTTTEEEEEEECCTTCCCE
T ss_pred CCeEEEEEEc--C---CCccceEEcCCCCEEEEECCC-ccC------CccccCCceEEEEECCCCeEEEEEecCCCCCce
Confidence 66 3322221 2 357899999999999997531 000 0000114789999999887653322 134799
Q ss_pred ceEEccCCCEEEEEeCCcEEEEEeCCCCCCceeeeccCCCCCCCceeECC-CCCEEEEEecCchhHHHhhhcchhHHHHH
Q 017520 223 GVALSRDEDYVVVCESWKCRKYWLKGERKGKLETFAENLPGAPDNINLAP-DGTFWIAIIKLDARRMKILNSSKLIKHVL 301 (370)
Q Consensus 223 gi~~~~dg~~l~v~~~~~l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~-~G~lwv~~~~~~~~~~~~~~~~~~~~~~~ 301 (370)
++++++|++.+|+++. .|+++|.++.+... ..+.......|+++++|+ +|++|++....
T Consensus 229 ~la~~~d~~~lyv~~~-~v~~~d~~t~~~~~-~~~~~~~~~~p~gi~vdp~~g~lyva~~~~------------------ 288 (328)
T 3dsm_A 229 EVQLNGTRDTLYWINN-DIWRMPVEADRVPV-RPFLEFRDTKYYGLTVNPNNGEVYVADAID------------------ 288 (328)
T ss_dssp EEEECTTSCEEEEESS-SEEEEETTCSSCCS-SCSBCCCSSCEEEEEECTTTCCEEEEECTT------------------
T ss_pred eEEEecCCCEEEEEcc-EEEEEECCCCceee-eeeecCCCCceEEEEEcCCCCeEEEEcccc------------------
Confidence 9999999999999987 79999987654322 122221135799999997 78999998321
Q ss_pred HhCCccccccccCCCceEEEEECCCCcEEEEEeC
Q 017520 302 AAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVD 335 (370)
Q Consensus 302 ~~~~~~~~~~~~~~~~g~v~~~~~~g~~~~~~~~ 335 (370)
....+.|.+||++|++++.+..
T Consensus 289 ------------y~~~~~V~v~d~~g~~~~~i~~ 310 (328)
T 3dsm_A 289 ------------YQQQGIVYRYSPQGKLIDEFYV 310 (328)
T ss_dssp ------------SSSEEEEEEECTTCCEEEEEEE
T ss_pred ------------cccCCEEEEECCCCCEEEEEEe
Confidence 1113679999999999998865
No 24
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.77 E-value=9.4e-17 Score=149.62 Aligned_cols=181 Identities=12% Similarity=0.143 Sum_probs=137.7
Q ss_pred cCCCcceEEc-CCCcEEEEe-cCCeEEEEe-CCe-EEEEEe-cCCCceeceEEcC-CCcEEEEeCC-CceEEEcCCC--e
Q 017520 78 VNHPEDASMD-KNGVIYTAT-RDGWIKRLQ-DGT-WVNWKF-IDSQTLVGLTSTK-EGHLIICDNA-NGLHKVSEDG--V 148 (370)
Q Consensus 78 ~~~P~~i~~d-~~G~l~v~~-~~g~I~~~~-~g~-~~~~~~-~~~~p~~gl~~d~-~G~L~v~~~~-~gi~~~~~~g--~ 148 (370)
+..|+++++| .++.||+++ .+++|++++ +|. .+.+.. ....|. |+++|. .|+||+++.. +.|.+++.+| .
T Consensus 72 ~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~-glavd~~~g~ly~~d~~~~~I~~~~~dG~~~ 150 (349)
T 3v64_C 72 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPG-GLAVDWVHDKLYWTDSGTSRIEVANLDGAHR 150 (349)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCC-EEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred CCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCcc-EEEEecCCCeEEEEcCCCCeEEEEcCCCCce
Confidence 5789999999 588999999 678999999 553 444433 345788 999996 6789999976 5688888766 4
Q ss_pred EEEEeecCCcccccccceEEcC-CCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEe-cCCCCccceEE
Q 017520 149 ENFLSYVNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-DGFYFANGVAL 226 (370)
Q Consensus 149 ~~~~~~~~g~~~~~~~~l~~d~-~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~-~~~~~p~gi~~ 226 (370)
+.+.. ..+..|++|++|+ +|.||++|.. ..++|+++++++...+.+. .++..|+|+++
T Consensus 151 ~~l~~----~~l~~P~~iavdp~~g~ly~td~~----------------~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~ 210 (349)
T 3v64_C 151 KVLLW----QSLEKPRAIALHPMEGTIYWTDWG----------------NTPRIEASSMDGSGRRIIADTHLFWPNGLTI 210 (349)
T ss_dssp EEEEC----TTCSCEEEEEEETTTTEEEEEECS----------------SSCEEEEEETTSCSCEESCCSSCSCEEEEEE
T ss_pred EEEEe----CCCCCcceEEEecCcCeEEEeccC----------------CCCEEEEEeCCCCCcEEEEECCCCCcceEEE
Confidence 44432 1246799999997 6789999863 2378999999866555543 56888999999
Q ss_pred ccCCCEEEEEeCCc--EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCCEEEEEecC
Q 017520 227 SRDEDYVVVCESWK--CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKL 283 (370)
Q Consensus 227 ~~dg~~l~v~~~~~--l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~ 283 (370)
|++++.|||++... |.++++++. ..+.+.....+.|++|+++ +|++|++....
T Consensus 211 d~~~~~lY~aD~~~~~I~~~~~dG~---~~~~~~~~~~~~P~giav~-~~~ly~td~~~ 265 (349)
T 3v64_C 211 DYAGRRMYWVDAKHHVIERANLDGS---HRKAVISQGLPHPFAITVF-EDSLYWTDWHT 265 (349)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSC---SCEEEECSSCSSEEEEEEE-TTEEEEEETTT
T ss_pred eCCCCEEEEEECCCCEEEEEeCCCC---ceEEEEeCCCCCceEEEEE-CCEEEEecCCC
Confidence 99888899999876 999998874 2333333334579999995 57899998765
No 25
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=99.76 E-value=2e-17 Score=170.21 Aligned_cols=225 Identities=12% Similarity=0.077 Sum_probs=162.2
Q ss_pred CcceEEcCCCcEEEEecCCeEEEEe--CCeEEEEEe----cCCCceeceEEcCCCcEEEEeCCCceEEEc-CCC-eEEEE
Q 017520 81 PEDASMDKNGVIYTATRDGWIKRLQ--DGTWVNWKF----IDSQTLVGLTSTKEGHLIICDNANGLHKVS-EDG-VENFL 152 (370)
Q Consensus 81 P~~i~~d~~G~l~v~~~~g~I~~~~--~g~~~~~~~----~~~~p~~gl~~d~~G~L~v~~~~~gi~~~~-~~g-~~~~~ 152 (370)
..+|+.|++|+||+|+.+++|++++ ++.++.+.. ...... +++.|++|+||++....|+++++ .++ ++.+.
T Consensus 365 v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~-~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~ 443 (781)
T 3v9f_A 365 VSSVCDDGQGKLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVL-CSLKDSEGNLWFGTYLGNISYYNTRLKKFQIIE 443 (781)
T ss_dssp EEEEEECTTSCEEEEEBSSCEEEEETTEEEEECC-----CCCSBEE-EEEECTTSCEEEEETTEEEEEECSSSCEEEECC
T ss_pred eEEEEEcCCCCEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceE-EEEECCCCCEEEEeccCCEEEEcCCCCcEEEec
Confidence 4678899999999999777799999 334443321 123466 89999999999998778999999 456 55442
Q ss_pred eecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecC------CCCccceEE
Q 017520 153 SYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG------FYFANGVAL 226 (370)
Q Consensus 153 ~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~------~~~p~gi~~ 226 (370)
.. +.....+..+..|++|+||++.. ++|+++|+++++++.+... ......++.
T Consensus 444 ~~--~~~~~~v~~i~~d~~g~lwigt~-------------------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~ 502 (781)
T 3v9f_A 444 LE--KNELLDVRVFYEDKNKKIWIGTH-------------------AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQ 502 (781)
T ss_dssp ST--TTCCCCEEEEEECTTSEEEEEET-------------------TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEE
T ss_pred cC--CCCCCeEEEEEECCCCCEEEEEC-------------------CceEEEeCCCCeEEecccCcccccccceeEEEEE
Confidence 21 22335678899999999999953 5799999988776655422 134567888
Q ss_pred ccCCCEEEEEeCC-cEEEEEeCCCCCCceeeeccCCCCCCC----ceeECCCCCEEEEEecCchhHHHhhhcchhHHHHH
Q 017520 227 SRDEDYVVVCESW-KCRKYWLKGERKGKLETFAENLPGAPD----NINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVL 301 (370)
Q Consensus 227 ~~dg~~l~v~~~~-~l~~~~~~~~~~~~~~~~~~~~~g~p~----~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~ 301 (370)
+++|+ +|++..+ +|++|+.++. ..+.+. ...+++. .++.|++|++|+++..+
T Consensus 503 d~~g~-lWigt~~~Gl~~~~~~~~---~~~~~~-~~~~l~~~~i~~i~~d~~g~lWi~T~~G------------------ 559 (781)
T 3v9f_A 503 DSEGR-FWIGTFGGGVGIYTPDMQ---LVRKFN-QYEGFCSNTINQIYRSSKGQMWLATGEG------------------ 559 (781)
T ss_dssp CTTCC-EEEEESSSCEEEECTTCC---EEEEEC-TTTTCSCSCEEEEEECTTSCEEEEETTE------------------
T ss_pred cCCCC-EEEEEcCCCEEEEeCCCC---eEEEcc-CCCCCCCCeeEEEEECCCCCEEEEECCC------------------
Confidence 99998 8888874 4999986543 334442 1223343 47789999999999743
Q ss_pred HhCCccccccccCCCceEEEEECCCCcEEEEEeCCCCCccccceeEEEE-CCEEEEEeCCCCeEEEEeC
Q 017520 302 AAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQL 369 (370)
Q Consensus 302 ~~~~~~~~~~~~~~~~g~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~-~g~L~~gs~~~~~i~~~~~ 369 (370)
.++++|++.+.+..|...+|...+.+.++.++ +|+||+++.++ |.+++.
T Consensus 560 -----------------lv~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lW~~t~~G--l~~~~~ 609 (781)
T 3v9f_A 560 -----------------LVCFPSARNFDYQVFQRKEGLPNTHIRAISEDKNGNIWASTNTG--ISCYIT 609 (781)
T ss_dssp -----------------EEEESCTTTCCCEEECGGGTCSCCCCCEEEECSSSCEEEECSSC--EEEEET
T ss_pred -----------------ceEEECCCCCcEEEccccCCCCCceEEEEEECCCCCEEEEcCCc--eEEEEC
Confidence 34899998777888887778766677777665 59999999654 766653
No 26
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.76 E-value=1.3e-16 Score=142.20 Aligned_cols=182 Identities=17% Similarity=0.229 Sum_probs=132.7
Q ss_pred CcCCCcceEEcCCCcEEEEecCCeEEEEe-CCe-EEEEEe-cCCCceeceEEcCCCcEEEEeCC-CceEEEcCCC-eEEE
Q 017520 77 SVNHPEDASMDKNGVIYTATRDGWIKRLQ-DGT-WVNWKF-IDSQTLVGLTSTKEGHLIICDNA-NGLHKVSEDG-VENF 151 (370)
Q Consensus 77 ~~~~P~~i~~d~~G~l~v~~~~g~I~~~~-~g~-~~~~~~-~~~~p~~gl~~d~~G~L~v~~~~-~gi~~~~~~g-~~~~ 151 (370)
.+..|.+|++|++|++|+++.+++|++++ ++. ...+.. ....|. +++++++|+||+++.. ++|++++... ....
T Consensus 65 ~~~~p~~i~~~~~g~l~v~~~~~~i~~~d~~~~~~~~~~~~~~~~p~-~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~ 143 (270)
T 1rwi_B 65 GLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLPFDGLNYPE-GLAVDTQGAVYVADRGNNRVVKLAAGSKTQTV 143 (270)
T ss_dssp SCCSCCCEEECTTCCEEEEETTTEEEEECTTCSCCEECCCCSCSSEE-EEEECTTCCEEEEEGGGTEEEEECTTCCSCEE
T ss_pred CcCCcceeEECCCCCEEEEcCCCEEEEEeCCCceEeeeecCCcCCCc-ceEECCCCCEEEEECCCCEEEEEECCCceeEe
Confidence 35689999999999999999888999999 554 333322 225688 9999999999999865 5688887433 2222
Q ss_pred EeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEE-ecCCCCccceEEccCC
Q 017520 152 LSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLV-ADGFYFANGVALSRDE 230 (370)
Q Consensus 152 ~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~-~~~~~~p~gi~~~~dg 230 (370)
.. ...+..+++|+++++|++|+++. ..++|+++|++++..... ...+..|.+++++++|
T Consensus 144 ~~---~~~~~~p~~i~~~~~g~l~v~~~-----------------~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g 203 (270)
T 1rwi_B 144 LP---FTGLNDPDGVAVDNSGNVYVTDT-----------------DNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAG 203 (270)
T ss_dssp CC---CCSCCSCCCEEECTTCCEEEEEG-----------------GGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTC
T ss_pred ec---cccCCCceeEEEeCCCCEEEEEC-----------------CCCEEEEEecCCCceEeecccCCCCceEEEECCCC
Confidence 11 12245789999999999999975 346899999987655433 2345789999999999
Q ss_pred CEEEEEeCCc--EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCCEEEEEecC
Q 017520 231 DYVVVCESWK--CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKL 283 (370)
Q Consensus 231 ~~l~v~~~~~--l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~ 283 (370)
+ +|+++... |.+|+.++... ..........|.++++|++|++|++....
T Consensus 204 ~-l~v~~~~~~~v~~~~~~~~~~---~~~~~~~~~~p~~i~~~~~g~l~v~~~~~ 254 (270)
T 1rwi_B 204 T-VYVTEHNTNQVVKLLAGSTTS---TVLPFTGLNTPLAVAVDSDRTVYVADRGN 254 (270)
T ss_dssp C-EEEEETTTSCEEEECTTCSCC---EECCCCSCSCEEEEEECTTCCEEEEEGGG
T ss_pred C-EEEEECCCCcEEEEcCCCCcc---eeeccCCCCCceeEEECCCCCEEEEECCC
Confidence 6 99998654 99998765321 11111111358899999999999998764
No 27
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.76 E-value=6.1e-16 Score=144.13 Aligned_cols=225 Identities=12% Similarity=0.107 Sum_probs=165.7
Q ss_pred CcceEEcCCCcEEEEecCCeEEEEe-CC-eEEEEEecCCCceeceEEc-CCCcEEEEeCC-CceEEEcCCC--eEEEEee
Q 017520 81 PEDASMDKNGVIYTATRDGWIKRLQ-DG-TWVNWKFIDSQTLVGLTST-KEGHLIICDNA-NGLHKVSEDG--VENFLSY 154 (370)
Q Consensus 81 P~~i~~d~~G~l~v~~~~g~I~~~~-~g-~~~~~~~~~~~p~~gl~~d-~~G~L~v~~~~-~gi~~~~~~g--~~~~~~~ 154 (370)
-.+.+.++++.|++++.+ .|.+++ ++ ..+........|. ++++| .++.||++|.. +.|++++.+| .+.+...
T Consensus 36 ~~C~~~~~~~~ll~~~~~-~I~~i~~~g~~~~~~~~~~~~~~-~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~ 113 (349)
T 3v64_C 36 RSCKALGPEPVLLFANRI-DIRQVLPHRSEYTLLLNNLENAI-ALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVST 113 (349)
T ss_dssp SCEEESSSCCEEEEECBS-CEEEECTTSCCEEEEECSCSCEE-EEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS
T ss_pred CcccccccCceeEeeccc-ceEEEeCCCCeeEEeecCCCceE-EEEEeccccEEEEEeccCCceEEEecCCCCceEEEeC
Confidence 345566677888888754 599999 55 4555555667799 99999 46789999976 5688998655 4444321
Q ss_pred cCCcccccccceEEcC-CCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEe-cCCCCccceEEccCCCE
Q 017520 155 VNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-DGFYFANGVALSRDEDY 232 (370)
Q Consensus 155 ~~g~~~~~~~~l~~d~-~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~-~~~~~p~gi~~~~dg~~ 232 (370)
.+..|.+|++|+ +|+||++|.. .++|.+++.++...+.+. ..+..|+++++++++..
T Consensus 114 ----~~~~p~glavd~~~g~ly~~d~~-----------------~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ 172 (349)
T 3v64_C 114 ----GLESPGGLAVDWVHDKLYWTDSG-----------------TSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGT 172 (349)
T ss_dssp ----SCSCCCEEEEETTTTEEEEEETT-----------------TTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTE
T ss_pred ----CCCCccEEEEecCCCeEEEEcCC-----------------CCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCe
Confidence 235789999996 6799999873 468999999866555554 56789999999998888
Q ss_pred EEEEeCCc---EEEEEeCCCCCCceeeeccCCCCCCCceeECC-CCCEEEEEecCchhHHHhhhcchhHHHHHHhCCccc
Q 017520 233 VVVCESWK---CRKYWLKGERKGKLETFAENLPGAPDNINLAP-DGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLF 308 (370)
Q Consensus 233 l~v~~~~~---l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~-~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (370)
|||++.+. |++++++|. ..+.+....-..|++|++|+ +++||++....
T Consensus 173 ly~td~~~~~~I~r~~~dG~---~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~------------------------- 224 (349)
T 3v64_C 173 IYWTDWGNTPRIEASSMDGS---GRRIIADTHLFWPNGLTIDYAGRRMYWVDAKH------------------------- 224 (349)
T ss_dssp EEEEECSSSCEEEEEETTSC---SCEESCCSSCSCEEEEEEETTTTEEEEEETTT-------------------------
T ss_pred EEEeccCCCCEEEEEeCCCC---CcEEEEECCCCCcceEEEeCCCCEEEEEECCC-------------------------
Confidence 99999764 999998874 22333322234699999995 67899998664
Q ss_pred cccccCCCceEEEEECCCCcEEEEEeCCCCCccccceeEEEECCEEEEEeCCCCeEEEEe
Q 017520 309 SQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIGKVQ 368 (370)
Q Consensus 309 ~~~~~~~~~g~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~~g~L~~gs~~~~~i~~~~ 368 (370)
+.|.+++.+|...+.+-... ......+...+++||+....++.|.+++
T Consensus 225 ---------~~I~~~~~dG~~~~~~~~~~---~~~P~giav~~~~ly~td~~~~~V~~~~ 272 (349)
T 3v64_C 225 ---------HVIERANLDGSHRKAVISQG---LPHPFAITVFEDSLYWTDWHTKSINSAN 272 (349)
T ss_dssp ---------TEEEEEETTSCSCEEEECSS---CSSEEEEEEETTEEEEEETTTTEEEEEE
T ss_pred ---------CEEEEEeCCCCceEEEEeCC---CCCceEEEEECCEEEEecCCCCeEEEEE
Confidence 46889998887655544322 2244555557899999999999999986
No 28
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=99.76 E-value=1.6e-16 Score=163.42 Aligned_cols=223 Identities=12% Similarity=0.131 Sum_probs=158.5
Q ss_pred CcceEEcCCCcEEEEecCCeEEEEe--CCeEEEEEe----------cCCCceeceEEcCCCcEEEEeCCCceEEEcCC-C
Q 017520 81 PEDASMDKNGVIYTATRDGWIKRLQ--DGTWVNWKF----------IDSQTLVGLTSTKEGHLIICDNANGLHKVSED-G 147 (370)
Q Consensus 81 P~~i~~d~~G~l~v~~~~g~I~~~~--~g~~~~~~~----------~~~~p~~gl~~d~~G~L~v~~~~~gi~~~~~~-g 147 (370)
..+|+.|++|+||+|+.+++|.+++ .+.++.+.. ...... +++.|++|+||++...+||+++++. +
T Consensus 315 v~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~-~i~~d~~g~lWigt~~~Gl~~~~~~~~ 393 (781)
T 3v9f_A 315 ARYIFQDSFNNIWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVS-SVCDDGQGKLWIGTDGGGINVFENGKR 393 (781)
T ss_dssp EEEEEECSSCCEEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEE-EEEECTTSCEEEEEBSSCEEEEETTEE
T ss_pred EEEEEEeCCCCEEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceE-EEEEcCCCCEEEEeCCCcEEEEECCCC
Confidence 4578999999999999778899999 456666532 123456 8999999999999877899999953 4
Q ss_pred -eEEEEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecC---CCCccc
Q 017520 148 -VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG---FYFANG 223 (370)
Q Consensus 148 -~~~~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~---~~~p~g 223 (370)
++.+.. ..+.....+.+++.|++|+||++.. .++|+++|+++++++.+... ......
T Consensus 394 ~~~~~~~-~~~~~~~~v~~i~~d~~g~lWigt~------------------~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~ 454 (781)
T 3v9f_A 394 VAIYNKE-NRELLSNSVLCSLKDSEGNLWFGTY------------------LGNISYYNTRLKKFQIIELEKNELLDVRV 454 (781)
T ss_dssp EEECC------CCCSBEEEEEECTTSCEEEEET------------------TEEEEEECSSSCEEEECCSTTTCCCCEEE
T ss_pred eEEEccC-CCCCCCcceEEEEECCCCCEEEEec------------------cCCEEEEcCCCCcEEEeccCCCCCCeEEE
Confidence 433311 1122335678899999999999964 26899999988887765431 223456
Q ss_pred eEEccCCCEEEEEeCCcEEEEEeCCCCCCceeeecc-C-CCCCCCceeECCCCCEEEEEecCchhHHHhhhcchhHHHHH
Q 017520 224 VALSRDEDYVVVCESWKCRKYWLKGERKGKLETFAE-N-LPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVL 301 (370)
Q Consensus 224 i~~~~dg~~l~v~~~~~l~~~~~~~~~~~~~~~~~~-~-~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~ 301 (370)
++.+++|+ +|++...+|++|+.++.+......... . .......++.|++|++|+++..+
T Consensus 455 i~~d~~g~-lwigt~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~------------------ 515 (781)
T 3v9f_A 455 FYEDKNKK-IWIGTHAGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGG------------------ 515 (781)
T ss_dssp EEECTTSE-EEEEETTEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSS------------------
T ss_pred EEECCCCC-EEEEECCceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCC------------------
Confidence 77788886 888887669999976543322111000 0 01234558899999999999742
Q ss_pred HhCCccccccccCCCceEEEEECCCCcEEEEEeCCCCCccccceeEEEE-CCEEEEEeC
Q 017520 302 AAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISL 359 (370)
Q Consensus 302 ~~~~~~~~~~~~~~~~g~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~-~g~L~~gs~ 359 (370)
++++++++++.+..|....+...+.+..+.++ +|+||+|+.
T Consensus 516 -----------------Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~ 557 (781)
T 3v9f_A 516 -----------------GVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLATG 557 (781)
T ss_dssp -----------------CEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEEET
T ss_pred -----------------CEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEEEC
Confidence 28999999888888877777666677777765 599999997
No 29
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.75 E-value=1.2e-16 Score=142.92 Aligned_cols=198 Identities=12% Similarity=0.089 Sum_probs=148.0
Q ss_pred CCCcceEEcC-CCcEEEEe-cCCeEEEEe-CCe-EEEEEec-CCCceeceEEcCC-CcEEEEeCC-CceEEEcCCC--eE
Q 017520 79 NHPEDASMDK-NGVIYTAT-RDGWIKRLQ-DGT-WVNWKFI-DSQTLVGLTSTKE-GHLIICDNA-NGLHKVSEDG--VE 149 (370)
Q Consensus 79 ~~P~~i~~d~-~G~l~v~~-~~g~I~~~~-~g~-~~~~~~~-~~~p~~gl~~d~~-G~L~v~~~~-~gi~~~~~~g--~~ 149 (370)
.+|+++++|+ +++||+++ .+++|++++ +|. .+.+... ...|. ++++|++ ++||+++.. +.|.+++.+| .+
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~-~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~ 114 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPE-GIALDHLGRTIFWTDSQLDRIEVAKMDGTQRR 114 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEE-EEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCcc-EEEEEecCCeEEEEECCCCEEEEEEcCCCCEE
Confidence 4789999997 67999999 678999999 554 3444332 35799 9999985 689999976 4688888666 44
Q ss_pred EEEeecCCcccccccceEEcC-CCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEe-cCCCCccceEEc
Q 017520 150 NFLSYVNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-DGFYFANGVALS 227 (370)
Q Consensus 150 ~~~~~~~g~~~~~~~~l~~d~-~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~-~~~~~p~gi~~~ 227 (370)
.+... .+..|+++++|+ +|+||+++.. ...++|++++.++...+.+. ..+..|+|++++
T Consensus 115 ~~~~~----~~~~P~~i~vd~~~g~lyv~~~~---------------~~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d 175 (267)
T 1npe_A 115 VLFDT----GLVNPRGIVTDPVRGNLYWTDWN---------------RDNPKIETSHMDGTNRRILAQDNLGLPNGLTFD 175 (267)
T ss_dssp EEECS----SCSSEEEEEEETTTTEEEEEECC---------------SSSCEEEEEETTSCCCEEEECTTCSCEEEEEEE
T ss_pred EEEEC----CCCCccEEEEeeCCCEEEEEECC---------------CCCcEEEEEecCCCCcEEEEECCCCCCcEEEEc
Confidence 44321 235789999999 5799999853 12468999998765555444 567789999999
Q ss_pred cCCCEEEEEeCCc--EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCCEEEEEecCchhHHHhhhcchhHHHHHHhCC
Q 017520 228 RDEDYVVVCESWK--CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYP 305 (370)
Q Consensus 228 ~dg~~l~v~~~~~--l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (370)
++++.|||++... |.++++++. ....+.. ....|++++.| +|++|++....
T Consensus 176 ~~~~~lyv~d~~~~~I~~~~~~g~---~~~~~~~-~~~~P~gi~~d-~~~lyva~~~~---------------------- 228 (267)
T 1npe_A 176 AFSSQLCWVDAGTHRAECLNPAQP---GRRKVLE-GLQYPFAVTSY-GKNLYYTDWKT---------------------- 228 (267)
T ss_dssp TTTTEEEEEETTTTEEEEEETTEE---EEEEEEE-CCCSEEEEEEE-TTEEEEEETTT----------------------
T ss_pred CCCCEEEEEECCCCEEEEEecCCC---ceEEEec-CCCCceEEEEe-CCEEEEEECCC----------------------
Confidence 9988899999876 999998763 2233332 23468999998 58899998765
Q ss_pred ccccccccCCCceEEEEECCC-CcEEEEEeC
Q 017520 306 KLFSQFITLGGGAHLIHVAED-GTIIRNLVD 335 (370)
Q Consensus 306 ~~~~~~~~~~~~g~v~~~~~~-g~~~~~~~~ 335 (370)
+.|.++|++ |+.+..+..
T Consensus 229 ------------~~v~~~d~~~g~~~~~i~~ 247 (267)
T 1npe_A 229 ------------NSVIAMDLAISKEMDTFHP 247 (267)
T ss_dssp ------------TEEEEEETTTTEEEEEECC
T ss_pred ------------CeEEEEeCCCCCceEEEcc
Confidence 468999985 888888754
No 30
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.75 E-value=1.4e-16 Score=164.28 Aligned_cols=223 Identities=14% Similarity=0.184 Sum_probs=160.7
Q ss_pred CcceEEcCCCc-EEEEecCCeEEEEe--CCeEEEEEe-----cCCCceeceEEcCCCcEEEEeCCCceEEEc-CCC-eEE
Q 017520 81 PEDASMDKNGV-IYTATRDGWIKRLQ--DGTWVNWKF-----IDSQTLVGLTSTKEGHLIICDNANGLHKVS-EDG-VEN 150 (370)
Q Consensus 81 P~~i~~d~~G~-l~v~~~~g~I~~~~--~g~~~~~~~-----~~~~p~~gl~~d~~G~L~v~~~~~gi~~~~-~~g-~~~ 150 (370)
..+++.|++|+ ||+|+.+++|++++ +++++.+.. ....+. +++.|++|+||++.. .|+++++ .++ ++.
T Consensus 408 v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~-~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~~ 485 (795)
T 4a2l_A 408 IKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVY-AILPDGEGNLWLGTL-SALVRFNPEQRSFTT 485 (795)
T ss_dssp EEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEE-EEEECSSSCEEEEES-SCEEEEETTTTEEEE
T ss_pred EEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeE-EEEECCCCCEEEEec-CceeEEeCCCCeEEE
Confidence 45788899999 99999878899999 577777643 123466 899999999999986 7999999 456 554
Q ss_pred EEeec--CCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEec-----CC--CCc
Q 017520 151 FLSYV--NGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD-----GF--YFA 221 (370)
Q Consensus 151 ~~~~~--~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~-----~~--~~p 221 (370)
+.... .+.....+..+..|++|++|++.. ++|+++|++++++ .+.. .+ ...
T Consensus 486 ~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-------------------~Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i 545 (795)
T 4a2l_A 486 IEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-------------------EGLSVFKQEGLDI-QKASILPVSNVTKLFT 545 (795)
T ss_dssp CCBCTTCCBCCCCCEEEEEECTTCCEEEEES-------------------SCEEEEEEETTEE-EECCCSCSCGGGGSCE
T ss_pred ccccccccccCCceEEEEEECCCCCEEEEeC-------------------CceEEEeCCCCeE-EEecCCCCCCCCCCee
Confidence 42210 122234678899999999999953 5799999887776 3321 11 134
Q ss_pred cceEEccCCCEEEEEeCCcEEEEEeCCCCCCceeeeccCCCCCCCc----eeECCCCCEEEEEecCchhHHHhhhcchhH
Q 017520 222 NGVALSRDEDYVVVCESWKCRKYWLKGERKGKLETFAENLPGAPDN----INLAPDGTFWIAIIKLDARRMKILNSSKLI 297 (370)
Q Consensus 222 ~gi~~~~dg~~l~v~~~~~l~~~~~~~~~~~~~~~~~~~~~g~p~~----i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~ 297 (370)
..++.+++|+ +|++..++|++|+.++. .++.+. ...++|++ ++.|++|++|+++..+
T Consensus 546 ~~i~~d~~g~-lWigT~~Gl~~~d~~~~---~~~~~~-~~~gl~~~~i~~i~~d~~g~lWi~t~~G-------------- 606 (795)
T 4a2l_A 546 NCIYEASNGI-IWVGTREGFYCFNEKDK---QIKRYN-TTNGLPNNVVYGILEDSFGRLWLSTNRG-------------- 606 (795)
T ss_dssp EEEEECTTSC-EEEEESSCEEEEETTTT---EEEEEC-GGGTCSCSCEEEEEECTTSCEEEEETTE--------------
T ss_pred EEEEECCCCC-EEEEeCCCceeECCCCC---cEEEeC-CCCCCchhheEEEEECCCCCEEEEcCCc--------------
Confidence 5677888998 88887767999996543 344442 23345554 7789999999999654
Q ss_pred HHHHHhCCccccccccCCCceEEEEECCCCcEEEEEeCCCCCccccc--eeEE-EECCEEEEEeCCCCeEEEEe
Q 017520 298 KHVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFV--TSGL-QVDNHLYVISLTSNFIGKVQ 368 (370)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~g~v~~~~~~g~~~~~~~~~~g~~~~~~--t~~~-~~~g~L~~gs~~~~~i~~~~ 368 (370)
+.+++++.+.+..|...+|...+.+ .++. ..+|+||+|+.+| +.+++
T Consensus 607 ----------------------l~~~~~~~~~~~~~~~~dGl~~~~f~~~~~~~~~~G~l~~g~~~G--l~~~~ 656 (795)
T 4a2l_A 607 ----------------------ISCFNPETEKFRNFTESDGLQSNQFNTASYCRTSVGQMYFGGING--ITTFR 656 (795)
T ss_dssp ----------------------EEEEETTTTEEEEECGGGTCSCSCEEEEEEEECTTSCEEEEETTE--EEEEC
T ss_pred ----------------------eEEEcCCCCcEEEcCCcCCCccccCccCceeECCCCeEEEecCCc--eEEEc
Confidence 8999999888999988888755544 2333 3469999999875 44443
No 31
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.75 E-value=1.7e-16 Score=149.86 Aligned_cols=181 Identities=12% Similarity=0.143 Sum_probs=136.7
Q ss_pred cCCCcceEEc-CCCcEEEEe-cCCeEEEEe-CCe-EEEEEe-cCCCceeceEEcC-CCcEEEEeCC-CceEEEcCCC--e
Q 017520 78 VNHPEDASMD-KNGVIYTAT-RDGWIKRLQ-DGT-WVNWKF-IDSQTLVGLTSTK-EGHLIICDNA-NGLHKVSEDG--V 148 (370)
Q Consensus 78 ~~~P~~i~~d-~~G~l~v~~-~~g~I~~~~-~g~-~~~~~~-~~~~p~~gl~~d~-~G~L~v~~~~-~gi~~~~~~g--~ 148 (370)
+..|+++++| .++.||+++ .+++|++++ +|. .+.+.. ....|. ||++|+ .|+||+++.. +.|.+++.+| .
T Consensus 115 ~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~-glavd~~~g~lY~~d~~~~~I~~~~~dg~~~ 193 (386)
T 3v65_B 115 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPG-GLAVDWVHDKLYWTDSGTSRIEVANLDGAHR 193 (386)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCC-CEEEETTTTEEEEEETTTTEEEECBTTSCSC
T ss_pred CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCcc-EEEEEeCCCeEEEEcCCCCeEEEEeCCCCce
Confidence 6789999999 478999998 678999999 554 444433 345789 999995 6789999986 4677777666 4
Q ss_pred EEEEeecCCcccccccceEEcC-CCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEe-cCCCCccceEE
Q 017520 149 ENFLSYVNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-DGFYFANGVAL 226 (370)
Q Consensus 149 ~~~~~~~~g~~~~~~~~l~~d~-~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~-~~~~~p~gi~~ 226 (370)
+.+.. ..+..|++|++|+ +|.||++|.. ..++|+++++++...+.+. .++..|+||++
T Consensus 194 ~~l~~----~~l~~P~giavdp~~g~ly~td~~----------------~~~~I~r~~~dG~~~~~~~~~~~~~PnGlav 253 (386)
T 3v65_B 194 KVLLW----QSLEKPRAIALHPMEGTIYWTDWG----------------NTPRIEASSMDGSGRRIIADTHLFWPNGLTI 253 (386)
T ss_dssp EEEEC----SSCSCEEEEEEETTTTEEEEEECS----------------SSCEEEEEETTSCSCEEEECSSCSCEEEEEE
T ss_pred EEeec----CCCCCCcEEEEEcCCCeEEEeccC----------------CCCEEEEEeCCCCCcEEEEECCCCCeeeEEE
Confidence 44432 2246799999997 5789999864 2378999999866555544 56888999999
Q ss_pred ccCCCEEEEEeCCc--EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCCEEEEEecC
Q 017520 227 SRDEDYVVVCESWK--CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKL 283 (370)
Q Consensus 227 ~~dg~~l~v~~~~~--l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~ 283 (370)
+++++.|||++... |.++++++. ..+.+.....+.|++|+++ ++++|++....
T Consensus 254 d~~~~~lY~aD~~~~~I~~~d~dG~---~~~~~~~~~~~~P~giav~-~~~ly~td~~~ 308 (386)
T 3v65_B 254 DYAGRRMYWVDAKHHVIERANLDGS---HRKAVISQGLPHPFAITVF-EDSLYWTDWHT 308 (386)
T ss_dssp EGGGTEEEEEETTTTEEEEECTTSC---SCEEEECSSCSSEEEEEEE-TTEEEEEETTT
T ss_pred eCCCCEEEEEECCCCEEEEEeCCCC---eeEEEEECCCCCceEEEEE-CCEEEEeeCCC
Confidence 99888899999876 999998874 2333333334579999995 46899998765
No 32
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.75 E-value=3.5e-16 Score=143.76 Aligned_cols=181 Identities=13% Similarity=0.085 Sum_probs=134.9
Q ss_pred cCCCcceEEcC-CCcEEEEe-cCCeEEEEe-CC----e-EEEEEe-cCCCceeceEEcC-CCcEEEEeCC-CceEEEcCC
Q 017520 78 VNHPEDASMDK-NGVIYTAT-RDGWIKRLQ-DG----T-WVNWKF-IDSQTLVGLTSTK-EGHLIICDNA-NGLHKVSED 146 (370)
Q Consensus 78 ~~~P~~i~~d~-~G~l~v~~-~~g~I~~~~-~g----~-~~~~~~-~~~~p~~gl~~d~-~G~L~v~~~~-~gi~~~~~~ 146 (370)
+..|+++++|+ ++.||+++ .+++|++++ ++ . .+.+.. ....|. ||++|. +++||+++.. +.|.+++.+
T Consensus 29 ~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~-glavd~~~~~ly~~d~~~~~I~~~~~~ 107 (316)
T 1ijq_A 29 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD-GLAVDWIHSNIYWTDSVLGTVSVADTK 107 (316)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCC-EEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcC-EEEEeecCCeEEEEECCCCEEEEEeCC
Confidence 57899999996 67999999 668999999 55 2 333332 335788 999995 6789999876 568888866
Q ss_pred C--eEEEEeecCCcccccccceEEcC-CCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEe-cCCCCcc
Q 017520 147 G--VENFLSYVNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-DGFYFAN 222 (370)
Q Consensus 147 g--~~~~~~~~~g~~~~~~~~l~~d~-~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~-~~~~~p~ 222 (370)
| .+.+... .+..|+++++|+ +|.||++|.. ..++|+++++++...+.+. ..+..|+
T Consensus 108 g~~~~~~~~~----~~~~P~~iavdp~~g~ly~~d~~----------------~~~~I~~~~~dG~~~~~~~~~~~~~P~ 167 (316)
T 1ijq_A 108 GVKRKTLFRE----NGSKPRAIVVDPVHGFMYWTDWG----------------TPAKIKKGGLNGVDIYSLVTENIQWPN 167 (316)
T ss_dssp SSSEEEEEEC----TTCCEEEEEEETTTTEEEEEECS----------------SSCEEEEEETTSCCEEEEECSSCSCEE
T ss_pred CCceEEEEEC----CCCCcceEEeCCCCCEEEEEccC----------------CCCeEEEEcCCCCCeEEEEECCCCCce
Confidence 6 4444331 245789999997 6789999863 2378999999866555543 4688999
Q ss_pred ceEEccCCCEEEEEeCCc--EEEEEeCCCCCCceeeeccC--CCCCCCceeECCCCCEEEEEecC
Q 017520 223 GVALSRDEDYVVVCESWK--CRKYWLKGERKGKLETFAEN--LPGAPDNINLAPDGTFWIAIIKL 283 (370)
Q Consensus 223 gi~~~~dg~~l~v~~~~~--l~~~~~~~~~~~~~~~~~~~--~~g~p~~i~~d~~G~lwv~~~~~ 283 (370)
|++++++++.|||++... |.++++++. ..+.+... ....|++++++. |++|++....
T Consensus 168 gla~d~~~~~lY~~D~~~~~I~~~d~dg~---~~~~~~~~~~~~~~P~giav~~-~~ly~~d~~~ 228 (316)
T 1ijq_A 168 GITLDLLSGRLYWVDSKLHSISSIDVNGG---NRKTILEDEKRLAHPFSLAVFE-DKVFWTDIIN 228 (316)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSC---SCEEEEECTTTTSSEEEEEEET-TEEEEEETTT
T ss_pred EEEEeccCCEEEEEECCCCeEEEEecCCC---ceEEEeecCCccCCcEEEEEEC-CEEEEEECCC
Confidence 999999888899999876 999998874 23334322 234699999985 7899998765
No 33
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.74 E-value=2.3e-16 Score=144.97 Aligned_cols=181 Identities=16% Similarity=0.164 Sum_probs=135.8
Q ss_pred cCCCcceEEcC-CCcEEEEe-cCCeEEEEe-CCe---EEEEEecCCCceeceEEcC-CCcEEEEeCC-CceEEEcCCC--
Q 017520 78 VNHPEDASMDK-NGVIYTAT-RDGWIKRLQ-DGT---WVNWKFIDSQTLVGLTSTK-EGHLIICDNA-NGLHKVSEDG-- 147 (370)
Q Consensus 78 ~~~P~~i~~d~-~G~l~v~~-~~g~I~~~~-~g~---~~~~~~~~~~p~~gl~~d~-~G~L~v~~~~-~gi~~~~~~g-- 147 (370)
+..|.++.+|. +|.||+++ .+++|++++ +|. ..........|. |+++|. .|+||+++.. +.|.+++.+|
T Consensus 34 ~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~-glavd~~~g~ly~~d~~~~~I~~~~~dG~~ 112 (318)
T 3sov_A 34 LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPD-GLACDWLGEKLYWTDSETNRIEVSNLDGSL 112 (318)
T ss_dssp EEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCC-EEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred CCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCcc-EEEEEcCCCeEEEEECCCCEEEEEECCCCc
Confidence 45688888885 78999999 678999999 553 233344456789 999995 7789999976 5688888766
Q ss_pred eEEEEeecCCcccccccceEEcC-CCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEE-ecCCCCccceE
Q 017520 148 VENFLSYVNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLV-ADGFYFANGVA 225 (370)
Q Consensus 148 ~~~~~~~~~g~~~~~~~~l~~d~-~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~-~~~~~~p~gi~ 225 (370)
.+.+.. ..+..|+++++|+ +|.||++|.. ..++|+++++++...+.+ ..++..|+|++
T Consensus 113 ~~~l~~----~~~~~P~giavdp~~g~ly~td~~----------------~~~~I~r~~~dG~~~~~~~~~~l~~Pngla 172 (318)
T 3sov_A 113 RKVLFW----QELDQPRAIALDPSSGFMYWTDWG----------------EVPKIERAGMDGSSRFIIINSEIYWPNGLT 172 (318)
T ss_dssp CEEEEC----SSCSSEEEEEEEGGGTEEEEEECS----------------SSCEEEEEETTSCSCEEEECSSCSCEEEEE
T ss_pred EEEEEe----CCCCCccEEEEeCCCCEEEEEecC----------------CCCEEEEEEcCCCCeEEEEECCCCCccEEE
Confidence 444432 2246789999997 5799999863 347899999986555544 36788999999
Q ss_pred EccCCCEEEEEeCCc--EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCCEEEEEecC
Q 017520 226 LSRDEDYVVVCESWK--CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKL 283 (370)
Q Consensus 226 ~~~dg~~l~v~~~~~--l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~ 283 (370)
+|++++.|||+++.. |++++++|. ..+.+.....+.|++++++.+ ++|++....
T Consensus 173 vd~~~~~lY~aD~~~~~I~~~d~dG~---~~~~~~~~~~~~P~glav~~~-~lywtd~~~ 228 (318)
T 3sov_A 173 LDYEEQKLYWADAKLNFIHKSNLDGT---NRQAVVKGSLPHPFALTLFED-ILYWTDWST 228 (318)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSC---SCEEEECSCCSCEEEEEEETT-EEEEEETTT
T ss_pred EeccCCEEEEEECCCCEEEEEcCCCC---ceEEEecCCCCCceEEEEeCC-EEEEEecCC
Confidence 999888899999876 999999874 334444333457999999854 677777654
No 34
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.74 E-value=5.6e-16 Score=148.99 Aligned_cols=237 Identities=12% Similarity=0.121 Sum_probs=167.8
Q ss_pred CCcCCCcceEEcC--CCcEEEEec-CCeEEEEe--CCeEEEEEecC----CCceeceEE-------cCCCc-EEEEeCCC
Q 017520 76 GSVNHPEDASMDK--NGVIYTATR-DGWIKRLQ--DGTWVNWKFID----SQTLVGLTS-------TKEGH-LIICDNAN 138 (370)
Q Consensus 76 ~~~~~P~~i~~d~--~G~l~v~~~-~g~I~~~~--~g~~~~~~~~~----~~p~~gl~~-------d~~G~-L~v~~~~~ 138 (370)
+.+..|..|++|+ +++||++.. +++|.+++ ++.+..+.... .+|. +|++ +++|+ ||+++...
T Consensus 136 ~~~~~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~-~ia~~~~~~~~d~~G~~lyvad~~~ 214 (496)
T 3kya_A 136 CGFSDNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIR-SIAFNKKIEGYADEAEYMIVAIDYD 214 (496)
T ss_dssp BCCCSEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEE-EEEECCCBTTTBCTTCEEEEEECCC
T ss_pred cccCCCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCc-EEEEeecccccCCCCCEEEEEeCCC
Confidence 3466899999996 589999984 46799999 56777765432 3689 9999 99997 99998764
Q ss_pred -------ceEEEc--CCC-eE------EEEeecCCcccccccceEEcC-CCcEEEEeCCCCCCCccceecccccCCCceE
Q 017520 139 -------GLHKVS--EDG-VE------NFLSYVNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQL 201 (370)
Q Consensus 139 -------gi~~~~--~~g-~~------~~~~~~~g~~~~~~~~l~~d~-~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l 201 (370)
.++.++ .+| +. .+. .+..++++++++ +|+||+++. ..+.|
T Consensus 215 ~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~------~~~~p~giavdp~~g~LYvtd~-----------------~~g~V 271 (496)
T 3kya_A 215 GKGDESPSVYIIKRNADGTFDDRSDIQLIA------AYKQCNGATIHPINGELYFNSY-----------------EKGQV 271 (496)
T ss_dssp TTGGGEEEEEEEECCTTSCCSTTSCEEEEE------EESCCCCEEECTTTCCEEEEET-----------------TTTEE
T ss_pred CCcccCceEEEEecCCCCceeecccceeec------cCCCceEEEEcCCCCeEEEEEC-----------------CCCEE
Confidence 277775 345 42 222 245789999999 679999986 45789
Q ss_pred EEEeCC-------CCeE-------------EEE-ecCCCCccceEEccCCCEEEEEeCCc--EEEEEeCCCC--CCceee
Q 017520 202 LKYDPS-------SNIT-------------TLV-ADGFYFANGVALSRDEDYVVVCESWK--CRKYWLKGER--KGKLET 256 (370)
Q Consensus 202 ~~~d~~-------t~~~-------------~~~-~~~~~~p~gi~~~~dg~~l~v~~~~~--l~~~~~~~~~--~~~~~~ 256 (370)
+++|++ ++.. ..+ ......|.+++++++|+.+|++++.+ |++++.++.. ......
T Consensus 272 ~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~ 351 (496)
T 3kya_A 272 FRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYN 351 (496)
T ss_dssp EEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEE
T ss_pred EEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEE
Confidence 999987 5543 112 12335688999999999999999877 9998876531 111122
Q ss_pred eccC--CC------------CCCC-ceeEC-------CCCCEEEEEecCchhHHHhhhcchhHHHHHHhCCccccccccC
Q 017520 257 FAEN--LP------------GAPD-NINLA-------PDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITL 314 (370)
Q Consensus 257 ~~~~--~~------------g~p~-~i~~d-------~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (370)
+... .. ..|. ++++| .+|+|||+...+
T Consensus 352 ~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N------------------------------- 400 (496)
T 3kya_A 352 FVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLN------------------------------- 400 (496)
T ss_dssp EEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGG-------------------------------
T ss_pred ecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCC-------------------------------
Confidence 2211 11 2477 77887 789999999775
Q ss_pred CCceEEEEECCCCcEEEEEeC--------------CCC-----CccccceeEEEE-C-CEEEEEeCCCCeEEEEeCC
Q 017520 315 GGGAHLIHVAEDGTIIRNLVD--------------PTG-----QLMSFVTSGLQV-D-NHLYVISLTSNFIGKVQLS 370 (370)
Q Consensus 315 ~~~g~v~~~~~~g~~~~~~~~--------------~~g-----~~~~~~t~~~~~-~-g~L~~gs~~~~~i~~~~~~ 370 (370)
.+|.+++++|.+....-. .+| -.++..+.+... + |+||++...+++|.++.++
T Consensus 401 ---~rIr~i~~~G~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~ 474 (496)
T 3kya_A 401 ---FCVRKVTPEGIVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISME 474 (496)
T ss_dssp ---TEEEEECTTCBEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred ---CEEEEEeCCCCEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECC
Confidence 468999999976655432 122 124455666655 3 8999999999999999864
No 35
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.74 E-value=3.8e-16 Score=145.68 Aligned_cols=166 Identities=18% Similarity=0.199 Sum_probs=118.3
Q ss_pred CceEecCCCcCCCcceEEcCCCcEEEEecCCeEEEEeCCeEEEEEe------cCCCceeceEEcCC----CcEEEEeCC-
Q 017520 69 DFIKVGEGSVNHPEDASMDKNGVIYTATRDGWIKRLQDGTWVNWKF------IDSQTLVGLTSTKE----GHLIICDNA- 137 (370)
Q Consensus 69 ~~~~~~~~~~~~P~~i~~d~~G~l~v~~~~g~I~~~~~g~~~~~~~------~~~~p~~gl~~d~~----G~L~v~~~~- 137 (370)
.+++++.+ +..|++|+++++|+|||++..|+|+++++|+.+.+.. ....|+ ||+++++ +.|||++..
T Consensus 22 ~~~~va~~-l~~P~~ia~~pdG~l~V~e~~g~I~~i~~g~~~~~~~~~v~~~g~~~p~-gia~~pdf~~~g~lYv~~~~~ 99 (352)
T 2ism_A 22 RVEEVVGG-LEVPWALAFLPDGGMLIAERPGRIRLFREGRLSTYAELSVYHRGESGLL-GLALHPRFPQEPYVYAYRTVA 99 (352)
T ss_dssp CEEEEECC-CSCEEEEEECTTSCEEEEETTTEEEEEETTEEEEEEECCCCCSTTCSEE-EEEECTTTTTSCEEEEEEEEC
T ss_pred EEEEEECC-CCCceEEEEcCCCeEEEEeCCCeEEEEECCCccEeecceEeecCCCCce-eEEECCCCCCCCEEEEEEecC
Confidence 34566665 7899999999999999999889999999766554432 235689 9999997 789999763
Q ss_pred -----CceEEEc-CCC-e---EEEEeecC--CcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEe
Q 017520 138 -----NGLHKVS-EDG-V---ENFLSYVN--GSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYD 205 (370)
Q Consensus 138 -----~gi~~~~-~~g-~---~~~~~~~~--g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d 205 (370)
..|.+++ .++ + +.+....+ ....+.+++|++++||+|||++..... .....+ .....++|+|++
T Consensus 100 ~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~--~~~~~d--~~~~~g~I~ri~ 175 (352)
T 2ism_A 100 EGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYE--RELAQD--LASLGGKILRLT 175 (352)
T ss_dssp TTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTC--GGGGGC--TTCSSSEEEEEC
T ss_pred CCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCC--CccccC--CCCCceEEEEEc
Confidence 4688888 333 2 23333223 234567899999999999999753110 000000 123458999999
Q ss_pred CCC-------------CeEEEEecCCCCccceEEccCCCEEEEEeCCc
Q 017520 206 PSS-------------NITTLVADGFYFANGVALSRDEDYVVVCESWK 240 (370)
Q Consensus 206 ~~t-------------~~~~~~~~~~~~p~gi~~~~dg~~l~v~~~~~ 240 (370)
+++ ...+++..++.+|+|+++++++..||+++.+.
T Consensus 176 ~dG~~p~~npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~ 223 (352)
T 2ism_A 176 PEGEPAPGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGP 223 (352)
T ss_dssp TTSSBCTTCTTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC
T ss_pred CCCCCCCCCcccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCC
Confidence 985 24456777889999999999433499999765
No 36
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.74 E-value=1.5e-15 Score=143.42 Aligned_cols=225 Identities=12% Similarity=0.108 Sum_probs=165.7
Q ss_pred CcceEEcCCCcEEEEecCCeEEEEe-CC-eEEEEEecCCCceeceEEcC-CCcEEEEeCC-CceEEEcCCC--eEEEEee
Q 017520 81 PEDASMDKNGVIYTATRDGWIKRLQ-DG-TWVNWKFIDSQTLVGLTSTK-EGHLIICDNA-NGLHKVSEDG--VENFLSY 154 (370)
Q Consensus 81 P~~i~~d~~G~l~v~~~~g~I~~~~-~g-~~~~~~~~~~~p~~gl~~d~-~G~L~v~~~~-~gi~~~~~~g--~~~~~~~ 154 (370)
-.+.+.++++.|+++.. ..|.+++ ++ ..+.+......|. ++++|+ ++.||++|.. +.|++++.+| .+.+..
T Consensus 79 ~~C~~~~~~~~l~~~~~-~~I~~i~~~~~~~~~~~~~~~~~~-gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~- 155 (386)
T 3v65_B 79 RSCKALGPEPVLLFANR-IDIRQVLPHRSEYTLLLNNLENAI-ALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVS- 155 (386)
T ss_dssp SCEEECSSCCEEEEECB-SCEEEECTTSCCCEEEECSCSCEE-EEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEEC-
T ss_pred CeECCccccceeEeecC-ccceeeccCCCcEEEEecCCCccE-EEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEe-
Confidence 34556667778888875 4699999 44 5666666677899 999994 6789999976 5688998655 444432
Q ss_pred cCCcccccccceEEcC-CCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEe-cCCCCccceEEccCCCE
Q 017520 155 VNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-DGFYFANGVALSRDEDY 232 (370)
Q Consensus 155 ~~g~~~~~~~~l~~d~-~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~-~~~~~p~gi~~~~dg~~ 232 (370)
..+..|++|++|+ +|+||++|.. .++|.++++++...+.+. .++..|+++++++++..
T Consensus 156 ---~~~~~p~glavd~~~g~lY~~d~~-----------------~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ 215 (386)
T 3v65_B 156 ---TGLESPGGLAVDWVHDKLYWTDSG-----------------TSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGT 215 (386)
T ss_dssp ---SSCSCCCCEEEETTTTEEEEEETT-----------------TTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTE
T ss_pred ---CCCCCccEEEEEeCCCeEEEEcCC-----------------CCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCe
Confidence 1235789999996 6799999873 468999998866555444 56789999999998888
Q ss_pred EEEEeCCc---EEEEEeCCCCCCceeeeccCCCCCCCceeECC-CCCEEEEEecCchhHHHhhhcchhHHHHHHhCCccc
Q 017520 233 VVVCESWK---CRKYWLKGERKGKLETFAENLPGAPDNINLAP-DGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLF 308 (370)
Q Consensus 233 l~v~~~~~---l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~-~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (370)
|||++.+. |+++++++.. ...+....-..|++|++|+ +++||++....
T Consensus 216 ly~td~~~~~~I~r~~~dG~~---~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~------------------------- 267 (386)
T 3v65_B 216 IYWTDWGNTPRIEASSMDGSG---RRIIADTHLFWPNGLTIDYAGRRMYWVDAKH------------------------- 267 (386)
T ss_dssp EEEEECSSSCEEEEEETTSCS---CEEEECSSCSCEEEEEEEGGGTEEEEEETTT-------------------------
T ss_pred EEEeccCCCCEEEEEeCCCCC---cEEEEECCCCCeeeEEEeCCCCEEEEEECCC-------------------------
Confidence 99999764 9999988742 2333322234699999994 67899998664
Q ss_pred cccccCCCceEEEEECCCCcEEEEEeCCCCCccccceeEEEECCEEEEEeCCCCeEEEEe
Q 017520 309 SQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIGKVQ 368 (370)
Q Consensus 309 ~~~~~~~~~g~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~~g~L~~gs~~~~~i~~~~ 368 (370)
+.|.+++.+|...+.+.... ......+...+++||+....++.|.+++
T Consensus 268 ---------~~I~~~d~dG~~~~~~~~~~---~~~P~giav~~~~ly~td~~~~~V~~~~ 315 (386)
T 3v65_B 268 ---------HVIERANLDGSHRKAVISQG---LPHPFAITVFEDSLYWTDWHTKSINSAN 315 (386)
T ss_dssp ---------TEEEEECTTSCSCEEEECSS---CSSEEEEEEETTEEEEEETTTTEEEEEE
T ss_pred ---------CEEEEEeCCCCeeEEEEECC---CCCceEEEEECCEEEEeeCCCCeEEEEE
Confidence 46899998887655554322 2244555557899999999999999986
No 37
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.72 E-value=3.6e-15 Score=133.26 Aligned_cols=216 Identities=11% Similarity=0.106 Sum_probs=153.9
Q ss_pred cEEEEecCCeEEEEe-CCeE-------EEEEecCCCceeceEEcC-CCcEEEEeCC-CceEEEcCCC--eEEEEeecCCc
Q 017520 91 VIYTATRDGWIKRLQ-DGTW-------VNWKFIDSQTLVGLTSTK-EGHLIICDNA-NGLHKVSEDG--VENFLSYVNGS 158 (370)
Q Consensus 91 ~l~v~~~~g~I~~~~-~g~~-------~~~~~~~~~p~~gl~~d~-~G~L~v~~~~-~gi~~~~~~g--~~~~~~~~~g~ 158 (370)
.||+++. +.|++++ +++. ..+..+...|. ++++|+ ++.||+++.. +.|++++.+| ...+.. .
T Consensus 3 ~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~-gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~----~ 76 (267)
T 1npe_A 3 HLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVII-GLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIR----Q 76 (267)
T ss_dssp EEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEE-EEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEEC----T
T ss_pred EEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEE-EEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEE----C
Confidence 5788874 5799999 5532 12233345688 999997 4689999976 4688898655 443322 1
Q ss_pred ccccccceEEcCC-CcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEe-cCCCCccceEEccCCCEEEEE
Q 017520 159 KLRFANDVVEASD-GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-DGFYFANGVALSRDEDYVVVC 236 (370)
Q Consensus 159 ~~~~~~~l~~d~~-G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~-~~~~~p~gi~~~~dg~~l~v~ 236 (370)
.+..|++|++|++ |+||++|. ..++|.+++.++...+.+. .++..|++++++++++.+||+
T Consensus 77 ~~~~p~~ia~d~~~~~lyv~d~-----------------~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~ 139 (267)
T 1npe_A 77 DLGSPEGIALDHLGRTIFWTDS-----------------QLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWT 139 (267)
T ss_dssp TCCCEEEEEEETTTTEEEEEET-----------------TTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEE
T ss_pred CCCCccEEEEEecCCeEEEEEC-----------------CCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEE
Confidence 2357899999985 68999986 3468999998865444443 456789999999987789999
Q ss_pred eCC---c-EEEEEeCCCCCCceeeeccCCCCCCCceeECCCC-CEEEEEecCchhHHHhhhcchhHHHHHHhCCcccccc
Q 017520 237 ESW---K-CRKYWLKGERKGKLETFAENLPGAPDNINLAPDG-TFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQF 311 (370)
Q Consensus 237 ~~~---~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G-~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (370)
+.. + |+++++++.. .+.+.......|.++++|++| ++|++....
T Consensus 140 ~~~~~~~~I~~~~~dg~~---~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~---------------------------- 188 (267)
T 1npe_A 140 DWNRDNPKIETSHMDGTN---RRILAQDNLGLPNGLTFDAFSSQLCWVDAGT---------------------------- 188 (267)
T ss_dssp ECCSSSCEEEEEETTSCC---CEEEECTTCSCEEEEEEETTTTEEEEEETTT----------------------------
T ss_pred ECCCCCcEEEEEecCCCC---cEEEEECCCCCCcEEEEcCCCCEEEEEECCC----------------------------
Confidence 975 3 9999987642 222322223469999999864 799998764
Q ss_pred ccCCCceEEEEECCCCcEEEEEeCCCCCccccceeEEEECCEEEEEeCCCCeEEEEeCC
Q 017520 312 ITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIGKVQLS 370 (370)
Q Consensus 312 ~~~~~~g~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~~g~L~~gs~~~~~i~~~~~~ 370 (370)
+.|.+++.+|.....+.. .+ .....+...+++||++...++.|.+++.+
T Consensus 189 ------~~I~~~~~~g~~~~~~~~-~~---~~P~gi~~d~~~lyva~~~~~~v~~~d~~ 237 (267)
T 1npe_A 189 ------HRAECLNPAQPGRRKVLE-GL---QYPFAVTSYGKNLYYTDWKTNSVIAMDLA 237 (267)
T ss_dssp ------TEEEEEETTEEEEEEEEE-CC---CSEEEEEEETTEEEEEETTTTEEEEEETT
T ss_pred ------CEEEEEecCCCceEEEec-CC---CCceEEEEeCCEEEEEECCCCeEEEEeCC
Confidence 458999988766555433 11 23345555689999999999999999863
No 38
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.72 E-value=4.3e-15 Score=136.44 Aligned_cols=218 Identities=11% Similarity=0.139 Sum_probs=156.9
Q ss_pred cEEEEecCCeEEEEe-C-CeEEEEEecCCCceeceEEcC-CCcEEEEeCC-CceEEEcCCC------eEEEEeecCCccc
Q 017520 91 VIYTATRDGWIKRLQ-D-GTWVNWKFIDSQTLVGLTSTK-EGHLIICDNA-NGLHKVSEDG------VENFLSYVNGSKL 160 (370)
Q Consensus 91 ~l~v~~~~g~I~~~~-~-g~~~~~~~~~~~p~~gl~~d~-~G~L~v~~~~-~gi~~~~~~g------~~~~~~~~~g~~~ 160 (370)
.|++++.+ .|.+++ + ++..........|. ++++|+ ++.||++|.. +.|++++.+| .+.+.. ..+
T Consensus 3 ~ll~~~~~-~I~~i~~~~~~~~~~~~~~~~p~-g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~----~~~ 76 (316)
T 1ijq_A 3 YLFFTNRH-EVRKMTLDRSEYTSLIPNLRNVV-ALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS----RDI 76 (316)
T ss_dssp EEEEECBS-SEEEEETTSCCCEEEECSCSSEE-EEEEETTTTEEEEEETTTTEEEEEEC--------CEEEEC----SSC
T ss_pred EEEEECCC-eEEEEECCCcceEehhcCCCceE-EEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEe----CCC
Confidence 46777754 599999 4 44555556677899 999996 4689999976 5688888432 222221 124
Q ss_pred ccccceEEcC-CCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEe-cCCCCccceEEccCCCEEEEEeC
Q 017520 161 RFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-DGFYFANGVALSRDEDYVVVCES 238 (370)
Q Consensus 161 ~~~~~l~~d~-~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~-~~~~~p~gi~~~~dg~~l~v~~~ 238 (370)
..|.+|++|+ +|+||++|. ..++|.++++++...+.+. ..+..|++++++++++.+||++.
T Consensus 77 ~~p~glavd~~~~~ly~~d~-----------------~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~ 139 (316)
T 1ijq_A 77 QAPDGLAVDWIHSNIYWTDS-----------------VLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDW 139 (316)
T ss_dssp SCCCEEEEETTTTEEEEEET-----------------TTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEEC
T ss_pred CCcCEEEEeecCCeEEEEEC-----------------CCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEcc
Confidence 5789999996 679999986 3478999999866655554 46789999999998888999997
Q ss_pred C--c-EEEEEeCCCCCCceeeeccCCCCCCCceeECC-CCCEEEEEecCchhHHHhhhcchhHHHHHHhCCccccccccC
Q 017520 239 W--K-CRKYWLKGERKGKLETFAENLPGAPDNINLAP-DGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITL 314 (370)
Q Consensus 239 ~--~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~-~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (370)
+ + |++++++|. ..+.+....-..|++|++|+ +++||++....
T Consensus 140 ~~~~~I~~~~~dG~---~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~------------------------------- 185 (316)
T 1ijq_A 140 GTPAKIKKGGLNGV---DIYSLVTENIQWPNGITLDLLSGRLYWVDSKL------------------------------- 185 (316)
T ss_dssp SSSCEEEEEETTSC---CEEEEECSSCSCEEEEEEETTTTEEEEEETTT-------------------------------
T ss_pred CCCCeEEEEcCCCC---CeEEEEECCCCCceEEEEeccCCEEEEEECCC-------------------------------
Confidence 5 3 999998874 23333322234699999996 56899998654
Q ss_pred CCceEEEEECCCCcEEEEEeCCCCCccccceeEEEECCEEEEEeCCCCeEEEEeC
Q 017520 315 GGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIGKVQL 369 (370)
Q Consensus 315 ~~~g~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~~g~L~~gs~~~~~i~~~~~ 369 (370)
+.|.+++.+|+..+.+....+. ......+...+++||+....++.|.+++.
T Consensus 186 ---~~I~~~d~dg~~~~~~~~~~~~-~~~P~giav~~~~ly~~d~~~~~V~~~~~ 236 (316)
T 1ijq_A 186 ---HSISSIDVNGGNRKTILEDEKR-LAHPFSLAVFEDKVFWTDIINEAIFSANR 236 (316)
T ss_dssp ---TEEEEEETTSCSCEEEEECTTT-TSSEEEEEEETTEEEEEETTTTEEEEEET
T ss_pred ---CeEEEEecCCCceEEEeecCCc-cCCcEEEEEECCEEEEEECCCCeEEEEeC
Confidence 3588999888766665432222 23345555578999999999999999874
No 39
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.72 E-value=2.3e-16 Score=145.59 Aligned_cols=188 Identities=11% Similarity=0.108 Sum_probs=130.1
Q ss_pred CCCcCCCcceEEcCCCcEEEEe-cCCeEEEEe-CCe---EEEEEe---------cCCCceeceEEcC-CCcEEEEeC--C
Q 017520 75 EGSVNHPEDASMDKNGVIYTAT-RDGWIKRLQ-DGT---WVNWKF---------IDSQTLVGLTSTK-EGHLIICDN--A 137 (370)
Q Consensus 75 ~~~~~~P~~i~~d~~G~l~v~~-~~g~I~~~~-~g~---~~~~~~---------~~~~p~~gl~~d~-~G~L~v~~~--~ 137 (370)
.+.+..|.+|++|++|++|+++ .+++|.+++ +|+ +..+.. ....|. ++++++ +|+|||++. .
T Consensus 87 ~~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~-~ia~~~~~g~lyv~d~~~~ 165 (329)
T 3fvz_A 87 KNLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPT-DVAVEPSTGAVFVSDGYCN 165 (329)
T ss_dssp TTTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEE-EEEECTTTCCEEEEECSSC
T ss_pred CCccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCc-EEEEeCCCCeEEEEeCCCC
Confidence 4557789999999999999998 578999999 665 333321 123689 999998 899999995 4
Q ss_pred CceEEEcCCC--eEEEEeecC-----CcccccccceEEcCC-CcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCC
Q 017520 138 NGLHKVSEDG--VENFLSYVN-----GSKLRFANDVVEASD-GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSN 209 (370)
Q Consensus 138 ~gi~~~~~~g--~~~~~~~~~-----g~~~~~~~~l~~d~~-G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~ 209 (370)
+.|.+++++| +..+..... ...+..|++|++|++ |+||+++. .+++|.+||++++
T Consensus 166 ~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~-----------------~~~~I~~~~~~~G 228 (329)
T 3fvz_A 166 SRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADR-----------------ENGRIQCFKTDTK 228 (329)
T ss_dssp CEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEET-----------------TTTEEEEEETTTC
T ss_pred CeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEEC-----------------CCCEEEEEECCCC
Confidence 6788999777 343322211 124567999999998 89999987 4578999999866
Q ss_pred eEEEEecC---CCCccceEEcc------CCCEEEEEeCCc--EEEEEeCCCCCCceeeec--cCCCCCCCceeECCCCCE
Q 017520 210 ITTLVADG---FYFANGVALSR------DEDYVVVCESWK--CRKYWLKGERKGKLETFA--ENLPGAPDNINLAPDGTF 276 (370)
Q Consensus 210 ~~~~~~~~---~~~p~gi~~~~------dg~~l~v~~~~~--l~~~~~~~~~~~~~~~~~--~~~~g~p~~i~~d~~G~l 276 (370)
+....... ...+.+++++| +|+ +|+++... |++++....+. ...+. ......|.++++|++|++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~-~~v~~~~~~~v~~~~~~~g~~--~~~~~~~~~~~~~p~~ia~~~dG~l 305 (329)
T 3fvz_A 229 EFVREIKHASFGRNVFAISYIPGFLFAVNGK-PYFGDQEPVQGFVMNFSSGEI--IDVFKPVRKHFDMPHDIVASEDGTV 305 (329)
T ss_dssp CEEEEECCTTTTTCEEEEEEETTEEEEEECC-CCTTCSCCCCEEEEETTTCCE--EEEECCSSSCCSSEEEEEECTTSEE
T ss_pred cEEEEEeccccCCCcceeeecCCEEEEeCCC-EEeccCCCcEEEEEEcCCCeE--EEEEcCCCCccCCeeEEEECCCCCE
Confidence 55433211 12334444444 666 66666555 88888654321 22221 122345899999999999
Q ss_pred EEEEecC
Q 017520 277 WIAIIKL 283 (370)
Q Consensus 277 wv~~~~~ 283 (370)
||+....
T Consensus 306 yvad~~~ 312 (329)
T 3fvz_A 306 YIGDAHT 312 (329)
T ss_dssp EEEESSS
T ss_pred EEEECCC
Confidence 9998764
No 40
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.71 E-value=4.6e-16 Score=140.12 Aligned_cols=181 Identities=14% Similarity=0.250 Sum_probs=132.1
Q ss_pred CcCCCcceEE-cCCCcEEEEec--CCeEEEEe-CCeEEEEEe--cCCCceeceEEcCCCcEEEEeCC-CceEEEcCCC--
Q 017520 77 SVNHPEDASM-DKNGVIYTATR--DGWIKRLQ-DGTWVNWKF--IDSQTLVGLTSTKEGHLIICDNA-NGLHKVSEDG-- 147 (370)
Q Consensus 77 ~~~~P~~i~~-d~~G~l~v~~~--~g~I~~~~-~g~~~~~~~--~~~~p~~gl~~d~~G~L~v~~~~-~gi~~~~~~g-- 147 (370)
.+..|.++++ +++|++|+++. ++.|.+++ +|+...... ....|. +++++++|++|+++.. +.|++++.+|
T Consensus 75 ~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~-~i~~~~~g~l~v~~~~~~~i~~~~~~g~~ 153 (286)
T 1q7f_A 75 QLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQFVRKFGATILQHPR-GVTVDNKGRIIVVECKVMRVIIFDQNGNV 153 (286)
T ss_dssp CBSSEEEEEEETTTTEEEEEECGGGCEEEEECTTSCEEEEECTTTCSCEE-EEEECTTSCEEEEETTTTEEEEECTTSCE
T ss_pred cccCceEEEEEcCCCeEEEEcCCCCCEEEEECCCCcEEEEecCccCCCce-EEEEeCCCCEEEEECCCCEEEEEcCCCCE
Confidence 3567999999 58999999983 78999999 776543322 234688 9999999999999865 5689998767
Q ss_pred eEEEEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecC--CCCccceE
Q 017520 148 VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG--FYFANGVA 225 (370)
Q Consensus 148 ~~~~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~--~~~p~gi~ 225 (370)
+..+.. ...+..|++|+++++|++|+++. ..++|++||+++..+..+... +..|.+++
T Consensus 154 ~~~~~~---~~~~~~p~~i~~~~~g~l~v~~~-----------------~~~~i~~~~~~g~~~~~~~~~g~~~~p~~i~ 213 (286)
T 1q7f_A 154 LHKFGC---SKHLEFPNGVVVNDKQEIFISDN-----------------RAHCVKVFNYEGQYLRQIGGEGITNYPIGVG 213 (286)
T ss_dssp EEEEEC---TTTCSSEEEEEECSSSEEEEEEG-----------------GGTEEEEEETTCCEEEEESCTTTSCSEEEEE
T ss_pred EEEeCC---CCccCCcEEEEECCCCCEEEEEC-----------------CCCEEEEEcCCCCEEEEEccCCccCCCcEEE
Confidence 333321 12245789999999999999975 347899999976555544322 46899999
Q ss_pred EccCCCEEEEEeCC---cEEEEEeCCCCCCceeeeccC-CCCCCCceeECCCCCEEEEEec
Q 017520 226 LSRDEDYVVVCESW---KCRKYWLKGERKGKLETFAEN-LPGAPDNINLAPDGTFWIAIIK 282 (370)
Q Consensus 226 ~~~dg~~l~v~~~~---~l~~~~~~~~~~~~~~~~~~~-~~g~p~~i~~d~~G~lwv~~~~ 282 (370)
++++|+ +|+++.. .|.+|+.++.. ...+... ....|.+++++++|++|++...
T Consensus 214 ~d~~G~-l~v~~~~~~~~i~~~~~~g~~---~~~~~~~~~~~~~~~i~~~~~g~l~vs~~~ 270 (286)
T 1q7f_A 214 INSNGE-ILIADNHNNFNLTIFTQDGQL---ISALESKVKHAQCFDVALMDDGSVVLASKD 270 (286)
T ss_dssp ECTTCC-EEEEECSSSCEEEEECTTSCE---EEEEEESSCCSCEEEEEEETTTEEEEEETT
T ss_pred ECCCCC-EEEEeCCCCEEEEEECCCCCE---EEEEcccCCCCcceeEEECCCCcEEEECCC
Confidence 999997 8888854 39999865532 2222211 1224778999999999999644
No 41
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.70 E-value=4.5e-15 Score=140.81 Aligned_cols=222 Identities=10% Similarity=0.134 Sum_probs=161.0
Q ss_pred EcCCCcEEEEecCCeEEEEe-CC-eEEEEEecCCCceeceEEcC-CCcEEEEeCC-CceEEEcCCC------eEEEEeec
Q 017520 86 MDKNGVIYTATRDGWIKRLQ-DG-TWVNWKFIDSQTLVGLTSTK-EGHLIICDNA-NGLHKVSEDG------VENFLSYV 155 (370)
Q Consensus 86 ~d~~G~l~v~~~~g~I~~~~-~g-~~~~~~~~~~~p~~gl~~d~-~G~L~v~~~~-~gi~~~~~~g------~~~~~~~~ 155 (370)
.++...|++++. ..|.+++ ++ ....+......|. +|++|+ ++.||++|.. +.|++++.+| ...+..
T Consensus 80 ~~~~~~ll~~~~-~~I~~i~l~~~~~~~~~~~~~~~~-~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~-- 155 (400)
T 3p5b_L 80 VGSIAYLFFTNR-HEVRKMTLDRSEYTSLIPNLRNVV-ALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS-- 155 (400)
T ss_dssp STTSCEEEEEET-TEEEEECTTSCSCEEEECSCSCEE-EEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEEC--
T ss_pred ccccceeEEecc-ceeEEEccCCcceeEeccccCcce-EEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEe--
Confidence 344556777774 5799999 44 4555566667899 999996 6789999976 5688888443 222222
Q ss_pred CCcccccccceEEcC-CCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEe-cCCCCccceEEccCCCEE
Q 017520 156 NGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-DGFYFANGVALSRDEDYV 233 (370)
Q Consensus 156 ~g~~~~~~~~l~~d~-~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~-~~~~~p~gi~~~~dg~~l 233 (370)
..+..|.+|++|. .++||++|. ..++|.+++++++..+.+. ..+..|++|++++.+..|
T Consensus 156 --~~~~~p~glavD~~~~~lY~~d~-----------------~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~l 216 (400)
T 3p5b_L 156 --RDIQAPDGLAVDWIHSNIYWTDS-----------------VLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFM 216 (400)
T ss_dssp --SSCSCEEEEEEETTTTEEEEEET-----------------TTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEE
T ss_pred --CCCCCcccEEEEecCCceEEEEC-----------------CCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeE
Confidence 2245789999997 789999987 3578999999877665554 478889999999988889
Q ss_pred EEEeCCc---EEEEEeCCCCCCceeeeccCCCCCCCceeECC-CCCEEEEEecCchhHHHhhhcchhHHHHHHhCCcccc
Q 017520 234 VVCESWK---CRKYWLKGERKGKLETFAENLPGAPDNINLAP-DGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFS 309 (370)
Q Consensus 234 ~v~~~~~---l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~-~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (370)
||++.+. |++++++|.. ...+....-..|.+|++|. +++||++....
T Consensus 217 y~td~~~~~~I~~~~~dG~~---~~~~~~~~l~~P~glavd~~~~~lY~aD~~~-------------------------- 267 (400)
T 3p5b_L 217 YWTDWGTPAKIKKGGLNGVD---IYSLVTENIQWPNGITLDLLSGRLYWVDSKL-------------------------- 267 (400)
T ss_dssp EEEECSSSCCEEEEETTSCS---CEEEECSSCSCEEEEEEETTTTEEEEEETTT--------------------------
T ss_pred EEEeCCCCCEEEEEeCCCCc---cEEEEECCCCceEEEEEEeCCCEEEEEECCC--------------------------
Confidence 9999653 9999998752 2333322234699999995 56899998654
Q ss_pred ccccCCCceEEEEECCCCcEEEEEeCCCCCccccceeEEEECCEEEEEeCCCCeEEEEe
Q 017520 310 QFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIGKVQ 368 (370)
Q Consensus 310 ~~~~~~~~g~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~~g~L~~gs~~~~~i~~~~ 368 (370)
..|.+++.+|...+.+....+. ......+...+++||+....++.|.+++
T Consensus 268 --------~~I~~~d~dG~~~~~~~~~~~~-l~~P~gl~v~~~~lywtd~~~~~V~~~~ 317 (400)
T 3p5b_L 268 --------HSISSIDVNGGNRKTILEDEKR-LAHPFSLAVFEDKVFWTDIINEAIFSAN 317 (400)
T ss_dssp --------TEEEEEETTSCCCEEEEECSST-TSSEEEEEEETTEEEEEESSSCSEEEEE
T ss_pred --------CEEEEEeCCCCccEEEEeCCCC-CCCCEEEEEeCCEEEEecCCCCeEEEEE
Confidence 3588999888776666443333 2334455557889999999999999886
No 42
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.70 E-value=2.4e-15 Score=150.25 Aligned_cols=185 Identities=14% Similarity=0.088 Sum_probs=143.7
Q ss_pred ecCCCcCCCcceEEcC-CCcEEEEe-cCCeEEEEe-CCe-EEEEEec-CCCceeceEEcC-CCcEEEEeCC-CceEEEcC
Q 017520 73 VGEGSVNHPEDASMDK-NGVIYTAT-RDGWIKRLQ-DGT-WVNWKFI-DSQTLVGLTSTK-EGHLIICDNA-NGLHKVSE 145 (370)
Q Consensus 73 ~~~~~~~~P~~i~~d~-~G~l~v~~-~~g~I~~~~-~g~-~~~~~~~-~~~p~~gl~~d~-~G~L~v~~~~-~gi~~~~~ 145 (370)
++...+..|.+|++|. +|.||+++ .+++|++++ +|. .+.+... ...|. ||++|. .++||+++.. +.|.+++.
T Consensus 31 ~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~-GlAvD~~~~~LY~tD~~~~~I~v~~~ 109 (628)
T 4a0p_A 31 IPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPE-GMAVDWLGKNLYWADTGTNRIEVSKL 109 (628)
T ss_dssp CCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCC-EEEEETTTTEEEEEETTTTEEEEEET
T ss_pred EEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcc-eEEEEeCCCEEEEEECCCCEEEEEec
Confidence 3334467899999995 78999999 678999999 653 4444443 35799 999995 5689999987 46788886
Q ss_pred CC--eEEEEeecCCcccccccceEEcC-CCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecCCCCcc
Q 017520 146 DG--VENFLSYVNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFAN 222 (370)
Q Consensus 146 ~g--~~~~~~~~~g~~~~~~~~l~~d~-~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~p~ 222 (370)
+| .+.+.. ..+..|++|++|| +|.||++|.+ ..++|+++++++...+.+..++..|+
T Consensus 110 dG~~~~~l~~----~~l~~P~~iavdp~~G~lY~tD~g----------------~~~~I~r~~~dG~~~~~l~~~~~~P~ 169 (628)
T 4a0p_A 110 DGQHRQVLVW----KDLDSPRALALDPAEGFMYWTEWG----------------GKPKIDRAAMDGSERTTLVPNVGRAN 169 (628)
T ss_dssp TSTTCEEEEC----SSCCCEEEEEEETTTTEEEEEECS----------------SSCEEEEEETTSCSCEEEECSCSSEE
T ss_pred CCCcEEEEEe----CCCCCcccEEEccCCCeEEEeCCC----------------CCCEEEEEeCCCCceEEEECCCCCcc
Confidence 66 445432 2346799999997 7899999863 25799999999887888888899999
Q ss_pred ceEEccCCCEEEEEeCCc--EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCCEEEEEecC
Q 017520 223 GVALSRDEDYVVVCESWK--CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKL 283 (370)
Q Consensus 223 gi~~~~dg~~l~v~~~~~--l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~ 283 (370)
||++|++++.|||++... |.+++++|.. .+.+... ...|.+++++. +++|++....
T Consensus 170 GlalD~~~~~LY~aD~~~~~I~~~d~dG~~---~~v~~~~-l~~P~glav~~-~~ly~tD~~~ 227 (628)
T 4a0p_A 170 GLTIDYAKRRLYWTDLDTNLIESSNMLGLN---REVIADD-LPHPFGLTQYQ-DYIYWTDWSR 227 (628)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCS---CEEEEEC-CSCEEEEEEET-TEEEEEETTT
T ss_pred eEEEccccCEEEEEECCCCEEEEEcCCCCc---eEEeecc-CCCceEEEEEC-CEEEEecCCC
Confidence 999999988899999877 9999998752 2334333 34699999987 6899998754
No 43
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.70 E-value=3.2e-15 Score=141.76 Aligned_cols=181 Identities=13% Similarity=0.086 Sum_probs=134.7
Q ss_pred cCCCcceEEcC-CCcEEEEe-cCCeEEEEe-CC-----eEEEEEe-cCCCceeceEEcC-CCcEEEEeCC-CceEEEcCC
Q 017520 78 VNHPEDASMDK-NGVIYTAT-RDGWIKRLQ-DG-----TWVNWKF-IDSQTLVGLTSTK-EGHLIICDNA-NGLHKVSED 146 (370)
Q Consensus 78 ~~~P~~i~~d~-~G~l~v~~-~~g~I~~~~-~g-----~~~~~~~-~~~~p~~gl~~d~-~G~L~v~~~~-~gi~~~~~~ 146 (370)
+..|.+|++|. ++.||+++ .+++|++++ +| ..+.+.. ....|. ||++|. .++||+++.. +.|.+++.+
T Consensus 111 ~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~-glavD~~~~~lY~~d~~~~~I~~~~~~ 189 (400)
T 3p5b_L 111 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD-GLAVDWIHSNIYWTDSVLGTVSVADTK 189 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEE-EEEEETTTTEEEEEETTTTEEEEECTT
T ss_pred cCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcc-cEEEEecCCceEEEECCCCeEEEEeCC
Confidence 67899999995 78999999 678999998 54 2333333 456789 999997 6789999976 568888866
Q ss_pred C--eEEEEeecCCcccccccceEEcC-CCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEE-ecCCCCcc
Q 017520 147 G--VENFLSYVNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLV-ADGFYFAN 222 (370)
Q Consensus 147 g--~~~~~~~~~g~~~~~~~~l~~d~-~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~-~~~~~~p~ 222 (370)
| .+.+... .+..|++|++|+ +|.||++|.. ..++|+++++++...+.+ ..++..|+
T Consensus 190 g~~~~~l~~~----~~~~P~~iavdp~~g~ly~td~~----------------~~~~I~~~~~dG~~~~~~~~~~l~~P~ 249 (400)
T 3p5b_L 190 GVKRKTLFRE----NGSKPRAIVVDPVHGFMYWTDWG----------------TPAKIKKGGLNGVDIYSLVTENIQWPN 249 (400)
T ss_dssp TCSEEEEEEC----SSCCEEEEEEETTTTEEEEEECS----------------SSCCEEEEETTSCSCEEEECSSCSCEE
T ss_pred CCceEEEEeC----CCCCcceEEEecccCeEEEEeCC----------------CCCEEEEEeCCCCccEEEEECCCCceE
Confidence 6 4444331 245799999998 6789999863 246899999986655554 35678999
Q ss_pred ceEEccCCCEEEEEeCCc--EEEEEeCCCCCCceeeeccC--CCCCCCceeECCCCCEEEEEecC
Q 017520 223 GVALSRDEDYVVVCESWK--CRKYWLKGERKGKLETFAEN--LPGAPDNINLAPDGTFWIAIIKL 283 (370)
Q Consensus 223 gi~~~~dg~~l~v~~~~~--l~~~~~~~~~~~~~~~~~~~--~~g~p~~i~~d~~G~lwv~~~~~ 283 (370)
||++|++++.|||+++.. |.+++++|. ..+.+... .-..|.+++++. +++|++....
T Consensus 250 glavd~~~~~lY~aD~~~~~I~~~d~dG~---~~~~~~~~~~~l~~P~gl~v~~-~~lywtd~~~ 310 (400)
T 3p5b_L 250 GITLDLLSGRLYWVDSKLHSISSIDVNGG---NRKTILEDEKRLAHPFSLAVFE-DKVFWTDIIN 310 (400)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSC---CCEEEEECSSTTSSEEEEEEET-TEEEEEESSS
T ss_pred EEEEEeCCCEEEEEECCCCEEEEEeCCCC---ccEEEEeCCCCCCCCEEEEEeC-CEEEEecCCC
Confidence 999999888899999876 999999874 23333322 224688999965 4688887654
No 44
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.70 E-value=1.9e-14 Score=132.65 Aligned_cols=234 Identities=13% Similarity=0.135 Sum_probs=160.9
Q ss_pred CCCcceEEcCCC-cEEEEec-------CCeEEEEe--CCeEEEEEecCCCceeceEEcCCCc-EEEEeCC-CceEEEc-C
Q 017520 79 NHPEDASMDKNG-VIYTATR-------DGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGH-LIICDNA-NGLHKVS-E 145 (370)
Q Consensus 79 ~~P~~i~~d~~G-~l~v~~~-------~g~I~~~~--~g~~~~~~~~~~~p~~gl~~d~~G~-L~v~~~~-~gi~~~~-~ 145 (370)
.+|.+++++++| .+|+++. ++.|+.++ +++..........|. +++++++|+ +|+++.. +.|..++ .
T Consensus 41 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~v~~~~~~~v~~~d~~ 119 (353)
T 3vgz_A 41 KGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPF-GATINNTTQTLWFGNTVNSAVTAIDAK 119 (353)
T ss_dssp SSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCCC-SEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred cCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCcc-eEEECCCCCEEEEEecCCCEEEEEeCC
Confidence 378899999987 6888873 56799999 666555555566788 999999997 8998875 4688888 5
Q ss_pred CC-e-EEEEeecCCc-----ccccccceEEcCCCc-EEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEec-
Q 017520 146 DG-V-ENFLSYVNGS-----KLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD- 216 (370)
Q Consensus 146 ~g-~-~~~~~~~~g~-----~~~~~~~l~~d~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~- 216 (370)
++ . ..+... .+. ....+++++++++|+ +|+++.. ..+.|+++|.++++......
T Consensus 120 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~----------------~~~~i~~~d~~~~~~~~~~~~ 182 (353)
T 3vgz_A 120 TGEVKGRLVLD-DRKRTEEVRPLQPRELVADDATNTVYISGIG----------------KESVIWVVDGGNIKLKTAIQN 182 (353)
T ss_dssp TCCEEEEEESC-CCCCCSSCCCCEEEEEEEETTTTEEEEEEES----------------SSCEEEEEETTTTEEEEEECC
T ss_pred CCeeEEEEecC-CCccccccCCCCCceEEECCCCCEEEEEecC----------------CCceEEEEcCCCCceEEEecC
Confidence 66 3 333211 111 112367899999985 8888632 34789999999887765555
Q ss_pred CCCCccceEEccCCCEEEEEeCCc-EEEEEeCCCCCCceeeecc-CCCCCCCceeECCCCC-EEEEEecCchhHHHhhhc
Q 017520 217 GFYFANGVALSRDEDYVVVCESWK-CRKYWLKGERKGKLETFAE-NLPGAPDNINLAPDGT-FWIAIIKLDARRMKILNS 293 (370)
Q Consensus 217 ~~~~p~gi~~~~dg~~l~v~~~~~-l~~~~~~~~~~~~~~~~~~-~~~g~p~~i~~d~~G~-lwv~~~~~~~~~~~~~~~ 293 (370)
....+.++++++||+.+|+++..+ |.+||+.+.+......... .....+.+++++++|+ +|++....
T Consensus 183 ~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~---------- 252 (353)
T 3vgz_A 183 TGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKA---------- 252 (353)
T ss_dssp CCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSS----------
T ss_pred CCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCC----------
Confidence 445689999999999999998877 9999976542211111101 1223456789999997 78876543
Q ss_pred chhHHHHHHhCCccccccccCCCceEEEEECC-CCcEEEEEeCCCCCccccceeEEEEC-CEEEEEeCCCCeEEEEeC
Q 017520 294 SKLIKHVLAAYPKLFSQFITLGGGAHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQVD-NHLYVISLTSNFIGKVQL 369 (370)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~-~g~~~~~~~~~~g~~~~~~t~~~~~~-g~L~~gs~~~~~i~~~~~ 369 (370)
+.+..+|. .++.+..+..... .......+ +.||+++...+.|.++++
T Consensus 253 ------------------------~~v~~~d~~~~~~~~~~~~~~~-----~~~~~s~dg~~l~v~~~~~~~v~~~d~ 301 (353)
T 3vgz_A 253 ------------------------AEVLVVDTRNGNILAKVAAPES-----LAVLFNPARNEAYVTHRQAGKVSVIDA 301 (353)
T ss_dssp ------------------------SEEEEEETTTCCEEEEEECSSC-----CCEEEETTTTEEEEEETTTTEEEEEET
T ss_pred ------------------------CEEEEEECCCCcEEEEEEcCCC-----ceEEECCCCCEEEEEECCCCeEEEEEC
Confidence 45788885 5787777765332 12222233 569999888888888875
No 45
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.68 E-value=3.9e-14 Score=129.72 Aligned_cols=210 Identities=16% Similarity=0.192 Sum_probs=145.3
Q ss_pred eEEcCCCcEEEEecCCeEEEEe-CCeEEEEEec-CCCceeceEEcCCCcEEEEeCCCceEEEcCCC-eEEEEeecCCccc
Q 017520 84 ASMDKNGVIYTATRDGWIKRLQ-DGTWVNWKFI-DSQTLVGLTSTKEGHLIICDNANGLHKVSEDG-VENFLSYVNGSKL 160 (370)
Q Consensus 84 i~~d~~G~l~v~~~~g~I~~~~-~g~~~~~~~~-~~~p~~gl~~d~~G~L~v~~~~~gi~~~~~~g-~~~~~~~~~g~~~ 160 (370)
.+++ +|.||+++.+|.|++++ +|+....... ..... .++++++|+||++...+++++++.+| ....... . .
T Consensus 103 ~~~~-~~~l~v~t~~~~l~~~d~~g~~~~~~~~~~~~~~-~~~~~~~g~l~vgt~~~~l~~~d~~g~~~~~~~~-~---~ 176 (330)
T 3hxj_A 103 FTIF-EDILYVTSMDGHLYAINTDGTEKWRFKTKKAIYA-TPIVSEDGTIYVGSNDNYLYAINPDGTEKWRFKT-N---D 176 (330)
T ss_dssp EEEE-TTEEEEECTTSEEEEECTTSCEEEEEECSSCCCS-CCEECTTSCEEEECTTSEEEEECTTSCEEEEEEC-S---S
T ss_pred ceEE-CCEEEEEecCCEEEEEcCCCCEEEEEcCCCceee-eeEEcCCCEEEEEcCCCEEEEECCCCCEeEEEec-C---C
Confidence 3444 88999999889999999 7554332222 22345 78888899999998778999999557 3322221 1 2
Q ss_pred ccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecCCCCccceEEccCCCEEEEEeCCc
Q 017520 161 RFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWK 240 (370)
Q Consensus 161 ~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~p~gi~~~~dg~~l~v~~~~~ 240 (370)
..+..+++|++|++|++. ++|+++|.++...............++++++|+ +|++...+
T Consensus 177 ~~~~~~~~d~~g~l~v~t--------------------~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~ 235 (330)
T 3hxj_A 177 AITSAASIGKDGTIYFGS--------------------DKVYAINPDGTEKWNFYAGYWTVTRPAISEDGT-IYVTSLDG 235 (330)
T ss_dssp CCCSCCEECTTCCEEEES--------------------SSEEEECTTSCEEEEECCSSCCCSCCEECTTSC-EEEEETTT
T ss_pred CceeeeEEcCCCEEEEEe--------------------CEEEEECCCCcEEEEEccCCcceeceEECCCCe-EEEEcCCC
Confidence 356678999999999993 579999954333333333334567888999987 88887755
Q ss_pred -EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCCEEEEEecCchhHHHhhhcchhHHHHHHhCCccccccccCCCceE
Q 017520 241 -CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAH 319 (370)
Q Consensus 241 -l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 319 (370)
|++++.++. ....+. .....+..+.+|++|++|+++..+ .
T Consensus 236 gl~~~~~~g~---~~~~~~-~~~~~~~~~~~~~~g~l~v~t~~g-----------------------------------g 276 (330)
T 3hxj_A 236 HLYAINPDGT---EKWRFK-TGKRIESSPVIGNTDTIYFGSYDG-----------------------------------H 276 (330)
T ss_dssp EEEEECTTSC---EEEEEE-CSSCCCSCCEECTTSCEEEECTTC-----------------------------------E
T ss_pred eEEEECCCCC---EeEEee-CCCCccccceEcCCCeEEEecCCC-----------------------------------C
Confidence 999975443 222222 222345668889999999998763 5
Q ss_pred EEEECCCCcEEEEEeCCCCCccccceeEEE-ECCEEEEEeCCCCe
Q 017520 320 LIHVAEDGTIIRNLVDPTGQLMSFVTSGLQ-VDNHLYVISLTSNF 363 (370)
Q Consensus 320 v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~-~~g~L~~gs~~~~~ 363 (370)
++++|++|+.+..+..+.. .+..+.. .+|+||+|+.++-.
T Consensus 277 l~~~d~~g~~~~~~~~~~~----~~~~~~~d~~g~l~~gt~~G~~ 317 (330)
T 3hxj_A 277 LYAINPDGTEKWNFETGSW----IIATPVIDENGTIYFGTRNGKF 317 (330)
T ss_dssp EEEECTTSCEEEEEECSSC----CCSCCEECTTCCEEEECTTSCE
T ss_pred EEEECCCCcEEEEEEcCCc----cccceEEcCCCEEEEEcCCCeE
Confidence 8999999999988876432 2344444 67999999988753
No 46
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=99.67 E-value=4.6e-15 Score=152.07 Aligned_cols=216 Identities=15% Similarity=0.206 Sum_probs=145.3
Q ss_pred CcceEEcCCCcEEEEecCCeEEEEe--CCeEEEEEec-------CCCceeceEEcCCCcEEEEeCCCceEEEcCC-----
Q 017520 81 PEDASMDKNGVIYTATRDGWIKRLQ--DGTWVNWKFI-------DSQTLVGLTSTKEGHLIICDNANGLHKVSED----- 146 (370)
Q Consensus 81 P~~i~~d~~G~l~v~~~~g~I~~~~--~g~~~~~~~~-------~~~p~~gl~~d~~G~L~v~~~~~gi~~~~~~----- 146 (370)
..+|+.|++|+||+|+ +++|++++ +++++.+... ..... ++..|++|+|||+...+||+++++.
T Consensus 375 v~~i~~d~~g~lWigt-~~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~i~~d~~g~lWigT~~~Gl~~~~~~~~~~~ 452 (758)
T 3ott_A 375 IRHIYEDKEQQLWIAT-DGSINRYDYATRQFIHYNIVDNTGTYNTNWTY-YIFEDTAGQLWISTCLGGIFVVDKHKLMQS 452 (758)
T ss_dssp EEEEEECTTSCEEEEE-TTEEEEEETTTTEEEEEEEECCC--CBSSSEE-EEEECTTSEEEEEESSSCEEEEEHHHHHHC
T ss_pred eEEEEECCCCCEEEEe-CCcHhhcCcCCCcEEEeecCCCcCCCCCceEE-EEEEcCCCCEEEEECCCceEEEcccccccc
Confidence 4678999999999999 56899999 6777766421 12356 7899999999999877899999832
Q ss_pred --C-eE--EEEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecC-C--
Q 017520 147 --G-VE--NFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG-F-- 218 (370)
Q Consensus 147 --g-~~--~~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~-~-- 218 (370)
+ +. .......+.+...+..|..|++|+||+... ..++|+++|+++++++.+... +
T Consensus 453 ~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~~~-----------------t~~Gl~~~d~~~~~~~~~~~~~~~~ 515 (758)
T 3ott_A 453 TSGQYIAEQNYSVHNGLSGMFINQIIPDNEGNVWVLLY-----------------NNKGIDKINPRTREVTKLFADELTG 515 (758)
T ss_dssp CSSEEECSEEECGGGTCSCSCEEEEEECTTSCEEEEET-----------------TCSSEEEEETTTTEEEEECTTTSCG
T ss_pred CCcceecccccccccccccceeeeEEEcCCCCEEEEcc-----------------CCCCcEEEeCCCCceEEecCCCcCC
Confidence 1 11 111112233334678899999999999221 225799999998888766422 1
Q ss_pred -CCccceEEccCCCEEEEEeCCcEEEEEeCCCCCCceeeeccCCCCCCC----ceeECCCCCEEEEEecCchhHHHhhhc
Q 017520 219 -YFANGVALSRDEDYVVVCESWKCRKYWLKGERKGKLETFAENLPGAPD----NINLAPDGTFWIAIIKLDARRMKILNS 293 (370)
Q Consensus 219 -~~p~gi~~~~dg~~l~v~~~~~l~~~~~~~~~~~~~~~~~~~~~g~p~----~i~~d~~G~lwv~~~~~~~~~~~~~~~ 293 (370)
..++.+..+.+|+ +|++...+|.+|++++.+. +.+. ..++|. .+..+ +|+||+++..+
T Consensus 516 ~~~~~~i~~d~~g~-lWigt~~Gl~~~~~~~~~~---~~~~--~~gl~~~~i~~i~~~-~g~lWi~t~~G---------- 578 (758)
T 3ott_A 516 EKSPNYLLCDEDGL-LWVGFHGGVMRINPKDESQ---QSIS--FGSFSNNEILSMTCV-KNSIWVSTTNG---------- 578 (758)
T ss_dssp GGCEEEEEECTTSC-EEEEETTEEEEECC--CCC---CBCC--CCC---CCEEEEEEE-TTEEEEEESSC----------
T ss_pred CcccceEEECCCCC-EEEEecCceEEEecCCCce---EEec--ccCCCccceEEEEEC-CCCEEEECCCC----------
Confidence 2456788888998 8888766699999765432 2221 123333 35555 89999999776
Q ss_pred chhHHHHHHhCCccccccccCCCceEEEEECCCCcEEEEEeCCCCCccccceeEEE-ECCEEEEEeCCC
Q 017520 294 SKLIKHVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQ-VDNHLYVISLTS 361 (370)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~-~~g~L~~gs~~~ 361 (370)
+.++|++...+..|..++.. +. ..+.. .+|+||+|+.+|
T Consensus 579 --------------------------l~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~G~l~fG~~~G 618 (758)
T 3ott_A 579 --------------------------LWIIDRKTMDARQQNMTNKR-FT--SLLFDPKEDCVYLGGADG 618 (758)
T ss_dssp --------------------------EEEEETTTCCEEEC--CCCC-CS--EEEEETTTTEEEEECBSE
T ss_pred --------------------------eEEEcCCCceeEEecCCCCc-ee--eeEEECCCCcEEEecCCc
Confidence 89999987777777555443 22 23333 379999999875
No 47
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.67 E-value=1.9e-14 Score=146.76 Aligned_cols=226 Identities=10% Similarity=0.122 Sum_probs=163.5
Q ss_pred cceEEcCCCcEEEEecCCeEEEEe-C-CeEEEEEecCCCceeceEEcC-CCcEEEEeCC-CceEEEcCCC------eEEE
Q 017520 82 EDASMDKNGVIYTATRDGWIKRLQ-D-GTWVNWKFIDSQTLVGLTSTK-EGHLIICDNA-NGLHKVSEDG------VENF 151 (370)
Q Consensus 82 ~~i~~d~~G~l~v~~~~g~I~~~~-~-g~~~~~~~~~~~p~~gl~~d~-~G~L~v~~~~-~gi~~~~~~g------~~~~ 151 (370)
...+++....|++++.. .|.+++ + .....+......|. +|+++. ++.||+++.. +.|++++.+| ...+
T Consensus 388 ~C~~~~~~p~Ll~an~~-~Ir~i~l~~~~~~~l~~~~~~~~-gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~v 465 (791)
T 3m0c_C 388 ACKAVGSIAYLFFTNRH-EVRKMTLDRSEYTSLIPNLRNVV-ALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTV 465 (791)
T ss_dssp CCEETTSCCEEEEECBS-SEEEECTTSCCCEEEECSCSSEE-EEEEETTTTEEEEEETTTTEEEEEEC--------CEEE
T ss_pred eeeeccccccccccccc-ceeEeeccCCcceeeecCCCceE-EEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEE
Confidence 34455556677887754 588888 4 45556666667888 999996 6789999987 4588887443 1222
Q ss_pred EeecCCcccccccceEEcCCC-cEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEe-cCCCCccceEEccC
Q 017520 152 LSYVNGSKLRFANDVVEASDG-SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-DGFYFANGVALSRD 229 (370)
Q Consensus 152 ~~~~~g~~~~~~~~l~~d~~G-~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~-~~~~~p~gi~~~~d 229 (370)
+ ...+..|.+|++|..+ +||++|. ..++|.++++++...+++. ..+..|++|++++.
T Consensus 466 i----~~~l~~P~GLAvD~~~~~LY~tD~-----------------~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~ 524 (791)
T 3m0c_C 466 I----SRDIQAPDGLAVDWIHSNIYWTDS-----------------VLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPV 524 (791)
T ss_dssp E----CSSCSCCCEEEEETTTTEEEEEET-----------------TTTEEEEEETTSSSEEEEEECTTCCEEEEEEETT
T ss_pred E----ecCCCCcceeeeeecCCcEEEEec-----------------CCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecC
Confidence 2 1235688999999765 8999997 3578999999877666554 57788999999998
Q ss_pred CCEEEEEeCCc---EEEEEeCCCCCCceeeeccCCCCCCCceeEC-CCCCEEEEEecCchhHHHhhhcchhHHHHHHhCC
Q 017520 230 EDYVVVCESWK---CRKYWLKGERKGKLETFAENLPGAPDNINLA-PDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYP 305 (370)
Q Consensus 230 g~~l~v~~~~~---l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d-~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (370)
+..|||++.+. |.+++++|. ....+....-..|.+|++| .+|+||++....
T Consensus 525 ~g~LYwtD~g~~~~I~~~~~dG~---~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~---------------------- 579 (791)
T 3m0c_C 525 HGFMYWTDWGTPAKIKKGGLNGV---DIYSLVTENIQWPNGITLDLLSGRLYWVDSKL---------------------- 579 (791)
T ss_dssp TTEEEEEECSSSCEEEEEETTSC---CEEEEECSSCSCEEEEEEETTTTEEEEEETTT----------------------
T ss_pred CCCEEEecCCCCCeEEEEecCCC---ceEEEEeCCCCCceEEEEecCCCeEEEEeCCC----------------------
Confidence 77899999754 999998874 2333333333469999999 567899998654
Q ss_pred ccccccccCCCceEEEEECCCCcEEEEEeCCCCCccccceeEEEECCEEEEEeCCCCeEEEEe
Q 017520 306 KLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIGKVQ 368 (370)
Q Consensus 306 ~~~~~~~~~~~~g~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~~g~L~~gs~~~~~i~~~~ 368 (370)
..|.+++.+|.....+....+. ......+...+++||+.....+.|.+++
T Consensus 580 ------------~~I~~~d~dG~~~~~v~~~~~~-l~~P~glav~~~~lYwtD~~~~~I~~~d 629 (791)
T 3m0c_C 580 ------------HSISSIDVNGGNRKTILEDEKR-LAHPFSLAVFEDKVFWTDIINEAIFSAN 629 (791)
T ss_dssp ------------TEEEEEETTSCSCEEEEECTTT-TSSEEEEEEETTEEEEEETTTTEEEEEE
T ss_pred ------------CcEEEEecCCCceEEEecCCCc-cCCCCEEEEeCCEEEEEECCCCEEEEEe
Confidence 3588899988776666543333 2333455557889999999999999886
No 48
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=99.66 E-value=2e-14 Score=130.15 Aligned_cols=188 Identities=13% Similarity=0.135 Sum_probs=128.1
Q ss_pred CCCcceEEcC-CCcEEEEe-cCCeEEEEe-C-CeEEEEEecC----C----CceeceEE---cCCCcEEEE-eC------
Q 017520 79 NHPEDASMDK-NGVIYTAT-RDGWIKRLQ-D-GTWVNWKFID----S----QTLVGLTS---TKEGHLIIC-DN------ 136 (370)
Q Consensus 79 ~~P~~i~~d~-~G~l~v~~-~~g~I~~~~-~-g~~~~~~~~~----~----~p~~gl~~---d~~G~L~v~-~~------ 136 (370)
..||++..|+ +|.+|+++ .+|+|.+++ + +..+...... + .+. ||.+ |++|+|||+ +.
T Consensus 13 ~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~s-Gl~~~~~D~~grL~vv~~~~~af~~ 91 (334)
T 2p9w_A 13 LTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMS-GLSLLTHDNSKRLFAVMKNAKSFNF 91 (334)
T ss_dssp CCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEE-EEEESSSSSCCEEEEEEEETTTTCT
T ss_pred cCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceee-EEEEeccCCCCcEEEEEcccccccc
Confidence 5799999985 88999999 789999999 4 5544442221 1 367 9999 789999994 41
Q ss_pred -------CCceEEEc-C---CC-eEEEEee--cC-------CcccccccceEEcCCCcEEEEeCCCCCCCccceeccccc
Q 017520 137 -------ANGLHKVS-E---DG-VENFLSY--VN-------GSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEG 195 (370)
Q Consensus 137 -------~~gi~~~~-~---~g-~~~~~~~--~~-------g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~ 195 (370)
...+++++ + ++ ....+.. .. +.....+|+|++|++|++||+++.
T Consensus 92 ~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~--------------- 156 (334)
T 2p9w_A 92 ADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFAL--------------- 156 (334)
T ss_dssp TSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEE---------------
T ss_pred cccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCC---------------
Confidence 24689999 5 46 3333331 11 113346899999999999999863
Q ss_pred CCCceEEEEeCCCCeEEEEec------CCCCccceEEccCCCEEEEEeCCc-EEEEEeCCCCCCceeee--cc-CCCCCC
Q 017520 196 KPHGQLLKYDPSSNITTLVAD------GFYFANGVALSRDEDYVVVCESWK-CRKYWLKGERKGKLETF--AE-NLPGAP 265 (370)
Q Consensus 196 ~~~g~l~~~d~~t~~~~~~~~------~~~~p~gi~~~~dg~~l~v~~~~~-l~~~~~~~~~~~~~~~~--~~-~~~g~p 265 (370)
..+.|+|+++++.....+.. ...+++||+++|||+.|++.++.+ |++||+..+.......- .. .....+
T Consensus 157 -~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~ 235 (334)
T 2p9w_A 157 -GMPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAWPEPVKINGDFGTLSGT 235 (334)
T ss_dssp -SSCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCCCEECEESSCCCCCTTE
T ss_pred -CCCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcceeecccccCCcccccCc
Confidence 21679999999665554321 234578999999999999999966 99999874321011110 00 012247
Q ss_pred Cce-eECCCCCE-EEEEecC
Q 017520 266 DNI-NLAPDGTF-WIAIIKL 283 (370)
Q Consensus 266 ~~i-~~d~~G~l-wv~~~~~ 283 (370)
++| ....+|++ +|+....
T Consensus 236 dgilp~~~~G~vllV~~~~~ 255 (334)
T 2p9w_A 236 EKIVTVPVGNESVLVGARAP 255 (334)
T ss_dssp EEEEEEEETTEEEEEEEETT
T ss_pred ccccccccCCEEEEEEcCCC
Confidence 885 66778987 6666543
No 49
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.66 E-value=4.4e-15 Score=136.52 Aligned_cols=176 Identities=16% Similarity=0.113 Sum_probs=125.0
Q ss_pred CCCcceEEcC-CCcEEEEecCCeEEEEe-C-CeEEEEEe-----cCCCceeceEEcC-CCcEEEEeCC------------
Q 017520 79 NHPEDASMDK-NGVIYTATRDGWIKRLQ-D-GTWVNWKF-----IDSQTLVGLTSTK-EGHLIICDNA------------ 137 (370)
Q Consensus 79 ~~P~~i~~d~-~G~l~v~~~~g~I~~~~-~-g~~~~~~~-----~~~~p~~gl~~d~-~G~L~v~~~~------------ 137 (370)
..|.+|++|+ +|+||+++..++|.+++ + ++++.+.. ....|+ ++++++ +|+||+++..
T Consensus 80 ~~p~gi~~~~~~g~l~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~-~i~~d~~~G~l~v~d~~~~~~~~~~~~~~ 158 (322)
T 2fp8_A 80 GRTYDISYNLQNNQLYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLY-AVTVDQRTGIVYFTDVSTLYDDRGVQQIM 158 (322)
T ss_dssp CCEEEEEEETTTTEEEEEETTTEEEEECTTCEECEEEESEETTEECSCEE-EEEECTTTCCEEEEESCSSCCTTCHHHHH
T ss_pred CCCceEEEcCCCCcEEEEECCCCEEEEeCCCCEEEEecccCCCCcccccc-eEEEecCCCEEEEECCcccccccccceeh
Confidence 4689999996 89999999777799999 4 55555532 124688 999999 9999999854
Q ss_pred ------CceEEEcC-CC-eEEEEeecCCcccccccceEEcCCCc-EEEEeCCCCCCCccceecccccCCCceEEEEeCCC
Q 017520 138 ------NGLHKVSE-DG-VENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSS 208 (370)
Q Consensus 138 ------~gi~~~~~-~g-~~~~~~~~~g~~~~~~~~l~~d~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t 208 (370)
.+++++++ ++ ++.+... +..+++|+++++|+ ||+++. ..++|++|+.++
T Consensus 159 ~~~~~~g~v~~~d~~~~~~~~~~~~-----~~~p~gia~~~dg~~lyv~d~-----------------~~~~I~~~~~~~ 216 (322)
T 2fp8_A 159 DTSDKTGRLIKYDPSTKETTLLLKE-----LHVPGGAEVSADSSFVLVAEF-----------------LSHQIVKYWLEG 216 (322)
T ss_dssp HHTCCCEEEEEEETTTTEEEEEEEE-----ESCCCEEEECTTSSEEEEEEG-----------------GGTEEEEEESSS
T ss_pred cccCCCceEEEEeCCCCEEEEeccC-----CccCcceEECCCCCEEEEEeC-----------------CCCeEEEEECCC
Confidence 35888984 46 5544322 35789999999986 999986 346899999874
Q ss_pred ---CeEEEEecCCCCccceEEccCCCEEEEEeCC-----------c-EEEEEeCCCCCCceeeeccC--C-CCCCCceeE
Q 017520 209 ---NITTLVADGFYFANGVALSRDEDYVVVCESW-----------K-CRKYWLKGERKGKLETFAEN--L-PGAPDNINL 270 (370)
Q Consensus 209 ---~~~~~~~~~~~~p~gi~~~~dg~~l~v~~~~-----------~-l~~~~~~~~~~~~~~~~~~~--~-~g~p~~i~~ 270 (370)
+..+.+.. +..|.|++++++|+ +|+++.. + |.+|+.++.. ...+... . ...+..++.
T Consensus 217 ~~~~~~~~~~~-~~gP~gi~~d~~G~-l~va~~~~~~~~~~~~~~~~v~~~d~~G~~---~~~~~~~~g~~~~~~~~~~~ 291 (322)
T 2fp8_A 217 PKKGTAEVLVK-IPNPGNIKRNADGH-FWVSSSEELDGNMHGRVDPKGIKFDEFGNI---LEVIPLPPPFAGEHFEQIQE 291 (322)
T ss_dssp TTTTCEEEEEE-CSSEEEEEECTTSC-EEEEEEEETTSSTTSCEEEEEEEECTTSCE---EEEEECCTTTTTSCCCEEEE
T ss_pred CcCCccceEEe-CCCCCCeEECCCCC-EEEEecCcccccccCCCccEEEEECCCCCE---EEEEECCCCCccccceEEEE
Confidence 33444433 22399999999998 8999865 3 8999876532 2222211 1 124666666
Q ss_pred CCCCCEEEEEecC
Q 017520 271 APDGTFWIAIIKL 283 (370)
Q Consensus 271 d~~G~lwv~~~~~ 283 (370)
.+|+|||++...
T Consensus 292 -~~g~L~v~~~~~ 303 (322)
T 2fp8_A 292 -HDGLLYIGTLFH 303 (322)
T ss_dssp -ETTEEEEECSSC
T ss_pred -eCCEEEEeecCC
Confidence 478999997554
No 50
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.66 E-value=3.2e-14 Score=130.66 Aligned_cols=218 Identities=11% Similarity=0.073 Sum_probs=156.4
Q ss_pred CCcEEEEecCCeEEEEe-CCe---EEEEEecCCCceeceEEcC-CCcEEEEeCC-CceEEEcCCC--e-EEEEeecCCcc
Q 017520 89 NGVIYTATRDGWIKRLQ-DGT---WVNWKFIDSQTLVGLTSTK-EGHLIICDNA-NGLHKVSEDG--V-ENFLSYVNGSK 159 (370)
Q Consensus 89 ~G~l~v~~~~g~I~~~~-~g~---~~~~~~~~~~p~~gl~~d~-~G~L~v~~~~-~gi~~~~~~g--~-~~~~~~~~g~~ 159 (370)
+..|++++. ..|.+++ ++. ..........+. ++.+++ ++.||++|.. +.|++++.+| . +.+... .
T Consensus 4 ~p~ll~~~~-~~I~~i~l~~~~~~~~~~~~~~~~~~-~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~----~ 77 (318)
T 3sov_A 4 APLLLYANR-RDLRLVDATNGKENATIVVGGLEDAA-AVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVS----G 77 (318)
T ss_dssp CCEEEEECE-EEEEEEETTCTTSCCEEEEEEEEEEE-EEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEE----C
T ss_pred ccEEEEEcc-CeEEEEECCCCceEEEEEecCCCccE-EEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcC----C
Confidence 346778774 4699999 543 333333445677 888986 5789999977 4688888554 2 222221 2
Q ss_pred cccccceEEcC-CCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEe-cCCCCccceEEccCCCEEEEEe
Q 017520 160 LRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-DGFYFANGVALSRDEDYVVVCE 237 (370)
Q Consensus 160 ~~~~~~l~~d~-~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~-~~~~~p~gi~~~~dg~~l~v~~ 237 (370)
+..|.++++|+ +|+||++|. ..++|.++++++...+.+. ..+..|+++++++.+..|||++
T Consensus 78 l~~p~glavd~~~g~ly~~d~-----------------~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td 140 (318)
T 3sov_A 78 LLSPDGLACDWLGEKLYWTDS-----------------ETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTD 140 (318)
T ss_dssp CSCCCEEEEETTTTEEEEEET-----------------TTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEE
T ss_pred CCCccEEEEEcCCCeEEEEEC-----------------CCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEe
Confidence 35789999996 679999987 3478999999866655554 6788999999999877899999
Q ss_pred CC--c-EEEEEeCCCCCCceeeeccCCCCCCCceeECC-CCCEEEEEecCchhHHHhhhcchhHHHHHHhCCcccccccc
Q 017520 238 SW--K-CRKYWLKGERKGKLETFAENLPGAPDNINLAP-DGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFIT 313 (370)
Q Consensus 238 ~~--~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~-~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (370)
.+ . |++++++|.. .+.+....-..|++|++|+ +++||++....
T Consensus 141 ~~~~~~I~r~~~dG~~---~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~------------------------------ 187 (318)
T 3sov_A 141 WGEVPKIERAGMDGSS---RFIIINSEIYWPNGLTLDYEEQKLYWADAKL------------------------------ 187 (318)
T ss_dssp CSSSCEEEEEETTSCS---CEEEECSSCSCEEEEEEETTTTEEEEEETTT------------------------------
T ss_pred cCCCCEEEEEEcCCCC---eEEEEECCCCCccEEEEeccCCEEEEEECCC------------------------------
Confidence 64 3 9999988742 2333322234699999997 66899998654
Q ss_pred CCCceEEEEECCCCcEEEEEeCCCCCccccceeEEEECCEEEEEeCCCCeEEEEeC
Q 017520 314 LGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIGKVQL 369 (370)
Q Consensus 314 ~~~~g~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~~g~L~~gs~~~~~i~~~~~ 369 (370)
+.|.+++.+|+..+.+.... ......+...++.||.....+..|.+++.
T Consensus 188 ----~~I~~~d~dG~~~~~~~~~~---~~~P~glav~~~~lywtd~~~~~V~~~~~ 236 (318)
T 3sov_A 188 ----NFIHKSNLDGTNRQAVVKGS---LPHPFALTLFEDILYWTDWSTHSILACNK 236 (318)
T ss_dssp ----TEEEEEETTSCSCEEEECSC---CSCEEEEEEETTEEEEEETTTTEEEEEET
T ss_pred ----CEEEEEcCCCCceEEEecCC---CCCceEEEEeCCEEEEEecCCCeEEEEEC
Confidence 46889998887666655422 23445555578899999999999999875
No 51
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.66 E-value=6.5e-15 Score=147.00 Aligned_cols=182 Identities=16% Similarity=0.175 Sum_probs=133.1
Q ss_pred CcCCCcceEEcC-CCcEEEEe-cCCeEEEEe-CCe--EEEEEe-cCCCceeceEEcC-CCcEEEEeCCC-ceEEEcCCC-
Q 017520 77 SVNHPEDASMDK-NGVIYTAT-RDGWIKRLQ-DGT--WVNWKF-IDSQTLVGLTSTK-EGHLIICDNAN-GLHKVSEDG- 147 (370)
Q Consensus 77 ~~~~P~~i~~d~-~G~l~v~~-~~g~I~~~~-~g~--~~~~~~-~~~~p~~gl~~d~-~G~L~v~~~~~-gi~~~~~~g- 147 (370)
.+..|.+|++|. +|.||+++ .+++|++++ +|. .+.+.. ....|. ||++|. .++||+++... .|.+++.+|
T Consensus 38 ~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~-GlAvD~~~~~ly~~d~~~~~I~v~~~dG~ 116 (619)
T 3s94_A 38 GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPD-GLACDWLGEKLYWTDSETNRIEVSNLDGS 116 (619)
T ss_dssp CCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEE-EEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcC-eEEEEecCCEEEEEeCCCCEEEEEECCCC
Confidence 367899999995 78999999 678999999 664 233333 336899 999998 56899999774 577777777
Q ss_pred -eEEEEeecCCcccccccceEEcCC-CcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEe-cCCCCccce
Q 017520 148 -VENFLSYVNGSKLRFANDVVEASD-GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-DGFYFANGV 224 (370)
Q Consensus 148 -~~~~~~~~~g~~~~~~~~l~~d~~-G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~-~~~~~p~gi 224 (370)
.+.+.. ..+..|++|++|+. |.||++|.. ..++|++.++++...+.+. ..+..|+||
T Consensus 117 ~~~~l~~----~~l~~P~~Iavdp~~g~ly~tD~g----------------~~~~I~r~~~dG~~~~~l~~~~~~~P~Gl 176 (619)
T 3s94_A 117 LRKVLFW----QELDQPRAIALDPSSGFMYWTDWG----------------EVPKIERAGMDGSSRFIIINSEIYWPNGL 176 (619)
T ss_dssp SCEEEEC----SSCSCCCCEEEETTTTEEEEEECS----------------SSCEEEEEETTSCSCEEEECSSCSSEEEE
T ss_pred CEEEEEe----CCCCCCceEEEecCCCeEEEeccC----------------CCCEEEEEECCCCceEEEEeCCCCCCcEE
Confidence 455542 23568999999985 799999863 2468999999866555554 578899999
Q ss_pred EEccCCCEEEEEeCCc--EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCCEEEEEecC
Q 017520 225 ALSRDEDYVVVCESWK--CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKL 283 (370)
Q Consensus 225 ~~~~dg~~l~v~~~~~--l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~ 283 (370)
++|++++.|||++... |++++++|. ..+.+.......|.+|+++++ ++|++.+..
T Consensus 177 ald~~~~~LY~aD~~~~~I~~~~~dG~---~~~~~~~~~~~~P~gi~~~~~-~ly~td~~~ 233 (619)
T 3s94_A 177 TLDYEEQKLYWADAKLNFIHKSNLDGT---NRQAVVKGSLPHPFALTLFED-ILYWTDWST 233 (619)
T ss_dssp EEETTTTEEEEEETTTCCEEEESSSCC---EEC---------CCCEEESSS-EEEEECTTT
T ss_pred EEEccCCEEEEEeCCCCeEEEecCCCC---ccEEEEeCCCCCceEEEEeCC-EEEEecCCC
Confidence 9999888899999876 999998874 233333222346999999977 899998664
No 52
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=99.65 E-value=5.2e-14 Score=129.73 Aligned_cols=206 Identities=16% Similarity=0.216 Sum_probs=136.1
Q ss_pred CceEecCCCcCCCcceEEcCCCcEEEEec-CCeEEEEe--CCeEEEEEe-------cCCCceeceEEcC----CCcEEEE
Q 017520 69 DFIKVGEGSVNHPEDASMDKNGVIYTATR-DGWIKRLQ--DGTWVNWKF-------IDSQTLVGLTSTK----EGHLIIC 134 (370)
Q Consensus 69 ~~~~~~~~~~~~P~~i~~d~~G~l~v~~~-~g~I~~~~--~g~~~~~~~-------~~~~p~~gl~~d~----~G~L~v~ 134 (370)
.+++++++ +..|++|+++++|.|||+.. .|+|++++ +|+.+.+.. ..+.++ ||++++ +|.||++
T Consensus 23 ~~~~va~g-L~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~Gll-Gia~~Pdf~~~g~lYv~ 100 (347)
T 3das_A 23 VLRTVATG-LNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLL-GIALSPDYASDHMVYAY 100 (347)
T ss_dssp EEEEEECC-CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEE-EEEECTTHHHHCEEEEE
T ss_pred eeEEeecC-CCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCce-eeEeccccccCCEEEEE
Confidence 56677776 89999999999999999997 89999998 465544321 234578 999997 4889997
Q ss_pred eC---CCceEEEc-CC-----C----eEEEEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceE
Q 017520 135 DN---ANGLHKVS-ED-----G----VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQL 201 (370)
Q Consensus 135 ~~---~~gi~~~~-~~-----g----~~~~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l 201 (370)
.. ..+|.++. .. . .+.+....+....+..+.|++++||.|||+....... ...--.....|.|
T Consensus 101 yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~----~~~qd~~~~~G~I 176 (347)
T 3das_A 101 FTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDT----GLSQDRKSLGGKI 176 (347)
T ss_dssp EECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCG----GGTTCTTCSTTCE
T ss_pred EecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCC----ccccCCCCCCCEE
Confidence 32 34788886 22 1 3444433333345677889999999999996431100 0000011346899
Q ss_pred EEEeCCCC--------eEEEEecCCCCccceEEccCCCEEEEEeCCc-----EEEEEeCCCCCCce------------ee
Q 017520 202 LKYDPSSN--------ITTLVADGFYFANGVALSRDEDYVVVCESWK-----CRKYWLKGERKGKL------------ET 256 (370)
Q Consensus 202 ~~~d~~t~--------~~~~~~~~~~~p~gi~~~~dg~~l~v~~~~~-----l~~~~~~~~~~~~~------------~~ 256 (370)
+|+++++. ..+++..++.+|.|++++++|+ ||+++.+. |.++. .+...+-. ..
T Consensus 177 lRi~~dG~ip~~nPf~~~~i~a~G~RNp~Gla~dp~G~-L~~~d~g~~~~deln~i~-~G~nyGwP~~~g~~~~~~~~~P 254 (347)
T 3das_A 177 LRMTPDGEPAPGNPFPGSPVYSYGHRNVQGLAWDDKQR-LFASEFGQDTWDELNAIK-PGDNYGWPEAEGKGGGSGFHDP 254 (347)
T ss_dssp EEECTTSSBCTTCSSTTCCEEEBCCSBCCEEEECTTCC-EEEEECCSSSCEEEEEEC-TTCBCCTTTCCSSCCCTTCCCC
T ss_pred EEEeCCCCccCCCCCCCCeEEeeCCCCcceEEECCCCC-EEEEecCCCCCceeeEEc-CCCEecCCcccCCCCCccccCC
Confidence 99999855 3567888999999999999987 99999764 44442 22211100 00
Q ss_pred eccCCC--CCCCceeECCCCCEEEEEecC
Q 017520 257 FAENLP--GAPDNINLAPDGTFWIAIIKL 283 (370)
Q Consensus 257 ~~~~~~--g~p~~i~~d~~G~lwv~~~~~ 283 (370)
...-.+ .-|.++++. +|.+|++...+
T Consensus 255 ~~~~~~~~~ap~G~~~~-~g~~~~~~l~~ 282 (347)
T 3das_A 255 VAQWSTDEASPSGIAYA-EGSVWMAGLRG 282 (347)
T ss_dssp SEEECTTTCCEEEEEEE-TTEEEEEESTT
T ss_pred cEecCCCCCCCcceEEE-cCceeeccccC
Confidence 000001 136678876 48899997665
No 53
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.65 E-value=3.1e-14 Score=128.85 Aligned_cols=176 Identities=13% Similarity=0.180 Sum_probs=126.6
Q ss_pred CCCcceEEcCCCcEEEEec-CCeEEEEe--CCeEEEEEec-----CCCceeceEEcCCCcEEEEeC--------------
Q 017520 79 NHPEDASMDKNGVIYTATR-DGWIKRLQ--DGTWVNWKFI-----DSQTLVGLTSTKEGHLIICDN-------------- 136 (370)
Q Consensus 79 ~~P~~i~~d~~G~l~v~~~-~g~I~~~~--~g~~~~~~~~-----~~~p~~gl~~d~~G~L~v~~~-------------- 136 (370)
..|.++++|++|++|+++. +++|++++ +|+++.+... ...|. +++++++|++|+++.
T Consensus 69 ~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~-~i~~d~~G~l~vtd~~~g~~~~~~~~~~~ 147 (296)
T 3e5z_A 69 HHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPN-DVCLAPDGSLWFSDPTYGIDKPEEGYGGE 147 (296)
T ss_dssp SSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCC-CEEECTTSCEEEEECSHHHHCGGGSSCCC
T ss_pred CCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCC-CEEECCCCCEEEECCcccccccccccccc
Confidence 5689999999999999984 57899999 7777665421 34577 899999999999753
Q ss_pred ----CCceEEEcCCC-eEEEEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCC-CCe
Q 017520 137 ----ANGLHKVSEDG-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPS-SNI 210 (370)
Q Consensus 137 ----~~gi~~~~~~g-~~~~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~-t~~ 210 (370)
..+|++++++| +..+... ...+++++++++|++++++. ..++|++|+.+ ++.
T Consensus 148 ~~~~~~~l~~~~~~g~~~~~~~~-----~~~~~gi~~s~dg~~lv~~~-----------------~~~~i~~~~~~~~g~ 205 (296)
T 3e5z_A 148 MELPGRWVFRLAPDGTLSAPIRD-----RVKPNGLAFLPSGNLLVSDT-----------------GDNATHRYCLNARGE 205 (296)
T ss_dssp CCSSSCEEEEECTTSCEEEEECC-----CSSEEEEEECTTSCEEEEET-----------------TTTEEEEEEECSSSC
T ss_pred ccCCCcEEEEECCCCCEEEeecC-----CCCCccEEECCCCCEEEEeC-----------------CCCeEEEEEECCCCc
Confidence 24799999657 5544321 34688999999998778765 34689999875 344
Q ss_pred E----EEEecCCCCccceEEccCCCEEEEEeCCcEEEEEeCCCCCCceeeeccCCCCCCCceeE-CCCC-CEEEEEecC
Q 017520 211 T----TLVADGFYFANGVALSRDEDYVVVCESWKCRKYWLKGERKGKLETFAENLPGAPDNINL-APDG-TFWIAIIKL 283 (370)
Q Consensus 211 ~----~~~~~~~~~p~gi~~~~dg~~l~v~~~~~l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~-d~~G-~lwv~~~~~ 283 (370)
. +.+......|.+++++++|+ +|++..++|.+|+.++. ....+. ...+ |.++++ +++| .||+++..+
T Consensus 206 ~~~~~~~~~~~~~~p~~i~~d~~G~-l~v~~~~~v~~~~~~g~---~~~~~~-~~~~-~~~~~f~~~d~~~L~v~t~~~ 278 (296)
T 3e5z_A 206 TEYQGVHFTVEPGKTDGLRVDAGGL-IWASAGDGVHVLTPDGD---ELGRVL-TPQT-TSNLCFGGPEGRTLYMTVSTE 278 (296)
T ss_dssp EEEEEEEECCSSSCCCSEEEBTTSC-EEEEETTEEEEECTTSC---EEEEEE-CSSC-CCEEEEESTTSCEEEEEETTE
T ss_pred CcCCCeEeeCCCCCCCeEEECCCCC-EEEEcCCeEEEECCCCC---EEEEEE-CCCC-ceeEEEECCCCCEEEEEcCCe
Confidence 4 22222345689999999998 89988333999997653 222332 2223 888988 4676 599998654
No 54
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=99.64 E-value=6.5e-15 Score=151.00 Aligned_cols=225 Identities=13% Similarity=0.170 Sum_probs=147.2
Q ss_pred CcceEEcCCCcEEEEecCCeEEEEe--CC---eEEEEEec-------CCCceeceEEcCCCcEEEEeCCCceEEEc-CCC
Q 017520 81 PEDASMDKNGVIYTATRDGWIKRLQ--DG---TWVNWKFI-------DSQTLVGLTSTKEGHLIICDNANGLHKVS-EDG 147 (370)
Q Consensus 81 P~~i~~d~~G~l~v~~~~g~I~~~~--~g---~~~~~~~~-------~~~p~~gl~~d~~G~L~v~~~~~gi~~~~-~~g 147 (370)
..+|+.|++|+||+|+. +++++++ ++ .++.+... ...+. +|..|.+|+|||+. ..||.+++ .++
T Consensus 326 v~~i~~D~~g~lWiGt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~-~i~~d~~g~lWigt-~~GL~~~~~~~~ 402 (758)
T 3ott_A 326 FYSLFRDSKGFYWFGGA-NGLIRFTDPAGERHDAIWYRMGDKTYPLSHNRIR-HIYEDKEQQLWIAT-DGSINRYDYATR 402 (758)
T ss_dssp EEEEEECTTCCEEEEET-TEEEEESCTTSSCCCCEEECTTCSSSCCSCSCEE-EEEECTTSCEEEEE-TTEEEEEETTTT
T ss_pred EEEEEEcCCCCEEEeeC-CcceeecccccccceeEEeccCCcCCCCCCCceE-EEEECCCCCEEEEe-CCcHhhcCcCCC
Confidence 35688899999999995 4699998 33 34444311 12356 88999999999998 46999999 556
Q ss_pred -eEEEEeec-CC-cccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCC------CeEE---EE-
Q 017520 148 -VENFLSYV-NG-SKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSS------NITT---LV- 214 (370)
Q Consensus 148 -~~~~~~~~-~g-~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t------~~~~---~~- 214 (370)
++.+.... .+ .+...+..+..|++|+||++... ++|+++|+++ +... .+
T Consensus 403 ~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigT~~------------------~Gl~~~~~~~~~~~~~~~~~~~~~~~ 464 (758)
T 3ott_A 403 QFIHYNIVDNTGTYNTNWTYYIFEDTAGQLWISTCL------------------GGIFVVDKHKLMQSTSGQYIAEQNYS 464 (758)
T ss_dssp EEEEEEEECCC--CBSSSEEEEEECTTSEEEEEESS------------------SCEEEEEHHHHHHCCSSEEECSEEEC
T ss_pred cEEEeecCCCcCCCCCceEEEEEEcCCCCEEEEECC------------------CceEEEccccccccCCcceecccccc
Confidence 65543211 11 12345778899999999999642 5799998653 1221 11
Q ss_pred -ecCCC--CccceEEccCCCEEEE--EeCCcEEEEEeCCCCCCceeeecc-CCC--CCCCceeECCCCCEEEEEecCchh
Q 017520 215 -ADGFY--FANGVALSRDEDYVVV--CESWKCRKYWLKGERKGKLETFAE-NLP--GAPDNINLAPDGTFWIAIIKLDAR 286 (370)
Q Consensus 215 -~~~~~--~p~gi~~~~dg~~l~v--~~~~~l~~~~~~~~~~~~~~~~~~-~~~--g~p~~i~~d~~G~lwv~~~~~~~~ 286 (370)
..++. ....+..+++|+ +|+ +...+|++|+.+.. ..+.+.. ... ..+..+..|++|++|+++..+
T Consensus 465 ~~~~l~~~~i~~i~~d~~g~-lWi~~~t~~Gl~~~d~~~~---~~~~~~~~~~~~~~~~~~i~~d~~g~lWigt~~G--- 537 (758)
T 3ott_A 465 VHNGLSGMFINQIIPDNEGN-VWVLLYNNKGIDKINPRTR---EVTKLFADELTGEKSPNYLLCDEDGLLWVGFHGG--- 537 (758)
T ss_dssp GGGTCSCSCEEEEEECTTSC-EEEEETTCSSEEEEETTTT---EEEEECTTTSCGGGCEEEEEECTTSCEEEEETTE---
T ss_pred cccccccceeeeEEEcCCCC-EEEEccCCCCcEEEeCCCC---ceEEecCCCcCCCcccceEEECCCCCEEEEecCc---
Confidence 11222 245678888888 887 33334999997543 3333321 111 234568889999999998643
Q ss_pred HHHhhhcchhHHHHHHhCCccccccccCCCceEEEEECCCCcEEEEEeCCCCCccccceeEEEECCEEEEEeCCCCeEEE
Q 017520 287 RMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIGK 366 (370)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~~g~L~~gs~~~~~i~~ 366 (370)
+++++++.+.+..|. .+|...+.+..+.+.+|+||+++.. .|.+
T Consensus 538 ---------------------------------l~~~~~~~~~~~~~~-~~gl~~~~i~~i~~~~g~lWi~t~~--Gl~~ 581 (758)
T 3ott_A 538 ---------------------------------VMRINPKDESQQSIS-FGSFSNNEILSMTCVKNSIWVSTTN--GLWI 581 (758)
T ss_dssp ---------------------------------EEEECC--CCCCBCC-CCC---CCEEEEEEETTEEEEEESS--CEEE
T ss_pred ---------------------------------eEEEecCCCceEEec-ccCCCccceEEEEECCCCEEEECCC--CeEE
Confidence 899998876666664 3566666778888888999999954 4666
Q ss_pred EeC
Q 017520 367 VQL 369 (370)
Q Consensus 367 ~~~ 369 (370)
++.
T Consensus 582 ~~~ 584 (758)
T 3ott_A 582 IDR 584 (758)
T ss_dssp EET
T ss_pred EcC
Confidence 653
No 55
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.64 E-value=6.6e-14 Score=129.08 Aligned_cols=229 Identities=7% Similarity=0.002 Sum_probs=154.8
Q ss_pred CCcceEEcCCCcEEEEe-cCCeEEEEe--CCeEEEEEecCCCceeceEEcCCCcEEEEe-CCCceEEEc-CCC-eEEEEe
Q 017520 80 HPEDASMDKNGVIYTAT-RDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGHLIICD-NANGLHKVS-EDG-VENFLS 153 (370)
Q Consensus 80 ~P~~i~~d~~G~l~v~~-~~g~I~~~~--~g~~~~~~~~~~~p~~gl~~d~~G~L~v~~-~~~gi~~~~-~~g-~~~~~~ 153 (370)
.|++++++ ++++|+++ .++.|..+| +++...-......|. +++++++|.||+++ ..+.|.+++ .++ +.....
T Consensus 45 ~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~~p~-~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~ 122 (328)
T 3dsm_A 45 VAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRITGFTSPR-YIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIE 122 (328)
T ss_dssp CEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEECCSSEE-EEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEE
T ss_pred cceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcCCCCCCc-EEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEE
Confidence 58899996 57899998 468899999 677643334567799 99998889999998 556799999 566 432222
Q ss_pred ecC-CcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecCCCCccceEEccCCCE
Q 017520 154 YVN-GSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDY 232 (370)
Q Consensus 154 ~~~-g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~p~gi~~~~dg~~ 232 (370)
... ......|.+|++ .++++|+++.+ ..+.|.++|++++++.........|+++++++||+
T Consensus 123 ~g~~~~~~~~p~~i~~-~~~~lyv~~~~----------------~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~- 184 (328)
T 3dsm_A 123 CPDMDMESGSTEQMVQ-YGKYVYVNCWS----------------YQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNK- 184 (328)
T ss_dssp CTTCCTTTCBCCCEEE-ETTEEEEEECT----------------TCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSE-
T ss_pred cCCccccCCCcceEEE-ECCEEEEEcCC----------------CCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCC-
Confidence 111 112237888999 57899999742 24689999999887765555556799999999998
Q ss_pred EEEEeCC-----------c-EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCC-EEEEEecCchhHHHhhhcchhHHH
Q 017520 233 VVVCESW-----------K-CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGT-FWIAIIKLDARRMKILNSSKLIKH 299 (370)
Q Consensus 233 l~v~~~~-----------~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~-lwv~~~~~~~~~~~~~~~~~~~~~ 299 (370)
+|++..+ + |+++|.++.+. ...+.-.....|.+++++++|+ +|++.. .
T Consensus 185 l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v--~~~~~~~~g~~p~~la~~~d~~~lyv~~~-~---------------- 245 (328)
T 3dsm_A 185 MWTITDGGYEGSPYGYEAPSLYRIDAETFTV--EKQFKFKLGDWPSEVQLNGTRDTLYWINN-D---------------- 245 (328)
T ss_dssp EEEEBCCBCTTCSSCBCCCEEEEEETTTTEE--EEEEECCTTCCCEEEEECTTSCEEEEESS-S----------------
T ss_pred EEEEECCCccCCccccCCceEEEEECCCCeE--EEEEecCCCCCceeEEEecCCCEEEEEcc-E----------------
Confidence 7777653 4 99999765322 1122111123699999999775 777643 2
Q ss_pred HHHhCCccccccccCCCceEEEEECCC-CcEEE-EEeCCCCCccccceeEEEE--CCEEEEEe----CCCCeEEEEeCC
Q 017520 300 VLAAYPKLFSQFITLGGGAHLIHVAED-GTIIR-NLVDPTGQLMSFVTSGLQV--DNHLYVIS----LTSNFIGKVQLS 370 (370)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~g~v~~~~~~-g~~~~-~~~~~~g~~~~~~t~~~~~--~g~L~~gs----~~~~~i~~~~~~ 370 (370)
++.+|.+ +++.. .+-. .+ ...+..+... +++||+++ ..++.|.+++.+
T Consensus 246 --------------------v~~~d~~t~~~~~~~~~~-~~--~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 246 --------------------IWRMPVEADRVPVRPFLE-FR--DTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp --------------------EEEEETTCSSCCSSCSBC-CC--SSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT
T ss_pred --------------------EEEEECCCCceeeeeeec-CC--CCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC
Confidence 6788865 44321 1111 11 1234555543 58899998 777888888753
No 56
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.64 E-value=3.6e-14 Score=141.66 Aligned_cols=183 Identities=16% Similarity=0.125 Sum_probs=138.3
Q ss_pred CCcCCCcceEEcC-CCcEEEEe-cCCeEEEEe-CC-eEEEEEe-cCCCceeceEEcC-CCcEEEEeCCC-ceEEEcCCC-
Q 017520 76 GSVNHPEDASMDK-NGVIYTAT-RDGWIKRLQ-DG-TWVNWKF-IDSQTLVGLTSTK-EGHLIICDNAN-GLHKVSEDG- 147 (370)
Q Consensus 76 ~~~~~P~~i~~d~-~G~l~v~~-~~g~I~~~~-~g-~~~~~~~-~~~~p~~gl~~d~-~G~L~v~~~~~-gi~~~~~~g- 147 (370)
..+..|.+|++|+ +|.||+++ .+++|++++ +| ..+.+.. ..+.|. ||++|. .++||++|... .|.+++.+|
T Consensus 346 ~~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~-GlAvD~~~~~lY~tD~~~~~I~v~~~~G~ 424 (619)
T 3s94_A 346 EDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPD-GIAVDWVARNLYWTDTGTDRIEVTRLNGT 424 (619)
T ss_dssp SCCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCC-EEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred cccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcC-ceEEecccCcEEEEeCCCCcEEEEeCCCC
Confidence 3367888999996 78999999 678999999 66 3444433 346899 999995 67899999874 566666666
Q ss_pred -eEEEEeecCCcccccccceEEcCC-CcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEe-cCCCCccce
Q 017520 148 -VENFLSYVNGSKLRFANDVVEASD-GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-DGFYFANGV 224 (370)
Q Consensus 148 -~~~~~~~~~g~~~~~~~~l~~d~~-G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~-~~~~~p~gi 224 (370)
.+.+.. ..+..|++|++||. |.||++|.+ ...+|.+.+.++...+.+. ..+..|+||
T Consensus 425 ~~~~l~~----~~l~~P~~iavdp~~G~ly~tD~g----------------~~~~I~r~~~dG~~~~~l~~~~l~~P~Gl 484 (619)
T 3s94_A 425 MRKILIS----EDLEEPRAIVLDPMVGYMYWTDWG----------------EIPKIERAALDGSDRVVLVNTSLGWPNGL 484 (619)
T ss_dssp SCEEEEC----TTCCSEEEEEEETTTTEEEEEECS----------------SSCEEEEEETTSCSCEEEECSSCSCEEEE
T ss_pred eEEEEEE----CCCCCeeeEEEEcCCCcEEEecCC----------------CCCEEEEEccCCCccEEEEeCCCCCCeee
Confidence 444432 23578999999985 999999974 2468999998865555444 468899999
Q ss_pred EEccCCCEEEEEeCCc--EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCCEEEEEecC
Q 017520 225 ALSRDEDYVVVCESWK--CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKL 283 (370)
Q Consensus 225 ~~~~dg~~l~v~~~~~--l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~ 283 (370)
++|++++.|||++... |.+++++|.. .+.+.......|.+|+++.+ +||++....
T Consensus 485 alD~~~~~LY~aD~~~~~I~~~~~dG~~---~~~~~~~~l~~P~glav~~~-~ly~tD~~~ 541 (619)
T 3s94_A 485 ALDYDEGKIYWGDAKTDKIEVMNTDGTG---RRVLVEDKIPHIFGFTLLGD-YVYWTDWQR 541 (619)
T ss_dssp EEETTTTEEEEEETTTTEEEEEESSSCC---CEEEEECCCCSSCCEEEETT-EEEEECTTS
T ss_pred EEcccCCEEEEEECCCCEEEEEecCCCc---eEEEeccCCCCcEEEEEECC-EEEEeecCC
Confidence 9999888899999876 9999998752 23333233346999999865 899998765
No 57
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.62 E-value=8.8e-14 Score=141.90 Aligned_cols=181 Identities=13% Similarity=0.069 Sum_probs=133.4
Q ss_pred cCCCcceEEcC-CCcEEEEe-cCCeEEEEe-CC-----eEEEEEe-cCCCceeceEEcCCC-cEEEEeCC-CceEEEcCC
Q 017520 78 VNHPEDASMDK-NGVIYTAT-RDGWIKRLQ-DG-----TWVNWKF-IDSQTLVGLTSTKEG-HLIICDNA-NGLHKVSED 146 (370)
Q Consensus 78 ~~~P~~i~~d~-~G~l~v~~-~~g~I~~~~-~g-----~~~~~~~-~~~~p~~gl~~d~~G-~L~v~~~~-~gi~~~~~~ 146 (370)
+..|.+|++|. ++.||+++ .+++|++++ +| ..+.+.. ....|. ||++|..+ +||+++.. +.|.+++.+
T Consensus 423 ~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~-GLAvD~~~~~LY~tD~~~~~I~v~~ld 501 (791)
T 3m0c_C 423 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD-GLAVDWIHSNIYWTDSVLGTVSVADTK 501 (791)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCC-EEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcc-eeeeeecCCcEEEEecCCCeEEEEeCC
Confidence 67899999996 78999999 668899998 54 2333333 556799 99999755 89999987 468888876
Q ss_pred C--eEEEEeecCCcccccccceEEcCC-CcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEe-cCCCCcc
Q 017520 147 G--VENFLSYVNGSKLRFANDVVEASD-GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-DGFYFAN 222 (370)
Q Consensus 147 g--~~~~~~~~~g~~~~~~~~l~~d~~-G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~-~~~~~p~ 222 (370)
| .+.+... .+..|++|++|+. |.||++|.+ ..++|.++++++...+++. .++..|+
T Consensus 502 G~~~~~l~~~----~l~~P~gIaVDp~~g~LYwtD~g----------------~~~~I~~~~~dG~~~~~lv~~~l~~P~ 561 (791)
T 3m0c_C 502 GVKRKTLFRE----NGSKPRAIVVDPVHGFMYWTDWG----------------TPAKIKKGGLNGVDIYSLVTENIQWPN 561 (791)
T ss_dssp SSSEEEEEEC----TTCCEEEEEEETTTTEEEEEECS----------------SSCEEEEEETTSCCEEEEECSSCSCEE
T ss_pred CCeEEEEEeC----CCCCcceEEEecCCCCEEEecCC----------------CCCeEEEEecCCCceEEEEeCCCCCce
Confidence 7 4444331 2457999999985 799999864 2368999999876665554 5678999
Q ss_pred ceEEccCCCEEEEEeCCc--EEEEEeCCCCCCceeeeccC--CCCCCCceeECCCCCEEEEEecC
Q 017520 223 GVALSRDEDYVVVCESWK--CRKYWLKGERKGKLETFAEN--LPGAPDNINLAPDGTFWIAIIKL 283 (370)
Q Consensus 223 gi~~~~dg~~l~v~~~~~--l~~~~~~~~~~~~~~~~~~~--~~g~p~~i~~d~~G~lwv~~~~~ 283 (370)
||+++++++.|||++... |.+++++|.. ...+... .-..|.+|+++. ++||++....
T Consensus 562 GLavD~~~~~LYwaD~~~~~I~~~d~dG~~---~~~v~~~~~~l~~P~glav~~-~~lYwtD~~~ 622 (791)
T 3m0c_C 562 GITLDLLSGRLYWVDSKLHSISSIDVNGGN---RKTILEDEKRLAHPFSLAVFE-DKVFWTDIIN 622 (791)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCS---CEEEEECTTTTSSEEEEEEET-TEEEEEETTT
T ss_pred EEEEecCCCeEEEEeCCCCcEEEEecCCCc---eEEEecCCCccCCCCEEEEeC-CEEEEEECCC
Confidence 999998888899999876 9999998752 2333322 112466788764 4899998765
No 58
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.62 E-value=6.5e-14 Score=133.22 Aligned_cols=182 Identities=15% Similarity=0.188 Sum_probs=126.3
Q ss_pred cCCCcceEEcCCCc-EEEEecCC--eEEEEe-C-Ce-EEEEE---e-cCCCceeceEEcC-CCcEEEEeCCCceEEEcC-
Q 017520 78 VNHPEDASMDKNGV-IYTATRDG--WIKRLQ-D-GT-WVNWK---F-IDSQTLVGLTSTK-EGHLIICDNANGLHKVSE- 145 (370)
Q Consensus 78 ~~~P~~i~~d~~G~-l~v~~~~g--~I~~~~-~-g~-~~~~~---~-~~~~p~~gl~~d~-~G~L~v~~~~~gi~~~~~- 145 (370)
...|. ++++++|+ ||+++.++ +|++++ + +. ...+. . ....|. ++++++ +|.||+++..+.|++++.
T Consensus 171 ~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~-~iav~p~~g~lyv~d~~~~I~~~d~~ 248 (409)
T 3hrp_A 171 FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIG-AVALDETEEWLYFVDSNKNFGRFNVK 248 (409)
T ss_dssp CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCC-BCEECTTSSEEEEECTTCEEEEEETT
T ss_pred CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcE-EEEEeCCCCeEEEEECCCcEEEEECC
Confidence 35677 99998875 78888544 899999 3 32 23331 2 446789 999999 789999886566999994
Q ss_pred CC-eEEEEee-cCCccccccc-ceEEcC-CCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecC----
Q 017520 146 DG-VENFLSY-VNGSKLRFAN-DVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG---- 217 (370)
Q Consensus 146 ~g-~~~~~~~-~~g~~~~~~~-~l~~d~-~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~---- 217 (370)
++ ...+... ..+.....|. ++++++ +|+||++|. .+++|++++.++. ...+...
T Consensus 249 ~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~-----------------~~~~I~~~~~~g~-~~~~~g~~~~~ 310 (409)
T 3hrp_A 249 TQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQ-----------------NLSSVYKITPDGE-CEWFCGSATQK 310 (409)
T ss_dssp TCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEET-----------------TTTEEEEECTTCC-EEEEEECTTCC
T ss_pred CCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeC-----------------CCCEEEEEecCCC-EEEEEeCCCCC
Confidence 44 4443221 1121112234 999999 589999986 3578999998754 4444322
Q ss_pred -----------CCCccceEEccCCCEEEEEeC-Cc--EEEEEeCCCCCCceeeeccC--------------CCCCCCcee
Q 017520 218 -----------FYFANGVALSRDEDYVVVCES-WK--CRKYWLKGERKGKLETFAEN--------------LPGAPDNIN 269 (370)
Q Consensus 218 -----------~~~p~gi~~~~dg~~l~v~~~-~~--l~~~~~~~~~~~~~~~~~~~--------------~~g~p~~i~ 269 (370)
+..|+|++++++|+ +|+++. .+ |+++++.+. ....+... .-..|.+++
T Consensus 311 g~~dg~~~~~~~~~P~gia~d~dG~-lyvad~~~~~~I~~~~~~~G---~v~~~~g~~~~~g~~~g~~~~~~~~~P~gia 386 (409)
T 3hrp_A 311 TVQDGLREEALFAQPNGMTVDEDGN-FYIVDGFKGYCLRKLDILDG---YVSTVAGQVDVASQIDGTPLEATFNYPYDIC 386 (409)
T ss_dssp SCBCEEGGGCBCSSEEEEEECTTCC-EEEEETTTTCEEEEEETTTT---EEEEEEECTTCBSCCCBSTTTCCBSSEEEEE
T ss_pred CcCCCcccccEeCCCeEEEEeCCCC-EEEEeCCCCCEEEEEECCCC---EEEEEeCCCCCCCcCCCChhceEeCCceEEE
Confidence 56799999999999 999998 66 999995432 22222211 013589999
Q ss_pred ECCCCCEEEEEecC
Q 017520 270 LAPDGTFWIAIIKL 283 (370)
Q Consensus 270 ~d~~G~lwv~~~~~ 283 (370)
+|++|+|||+....
T Consensus 387 vd~~g~lyVad~~n 400 (409)
T 3hrp_A 387 YDGEGGYWIAEAWG 400 (409)
T ss_dssp ECSSSEEEEEESTT
T ss_pred EcCCCCEEEEECCC
Confidence 99999999998765
No 59
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.61 E-value=4.8e-13 Score=123.57 Aligned_cols=237 Identities=12% Similarity=0.143 Sum_probs=147.8
Q ss_pred cCCCcceEEcCCCcEEEEec---CCeEEEEe--CCeEEEEE---ecCCCceeceEEcCCCc-EEEEeCCC-ceEEEc--C
Q 017520 78 VNHPEDASMDKNGVIYTATR---DGWIKRLQ--DGTWVNWK---FIDSQTLVGLTSTKEGH-LIICDNAN-GLHKVS--E 145 (370)
Q Consensus 78 ~~~P~~i~~d~~G~l~v~~~---~g~I~~~~--~g~~~~~~---~~~~~p~~gl~~d~~G~-L~v~~~~~-gi~~~~--~ 145 (370)
...|.+++++++|+||+++. ++.|+.++ +++.+.+. .....|. ++++++||+ ||+++... .+..++ .
T Consensus 39 ~~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~-~~a~spdg~~l~~~~~~~~~v~v~~~~~ 117 (347)
T 3hfq_A 39 TQNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPA-YVAVDEARQLVYSANYHKGTAEVMKIAA 117 (347)
T ss_dssp CSCCCCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCS-EEEEETTTTEEEEEETTTTEEEEEEECT
T ss_pred cCCcceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCE-EEEECCCCCEEEEEeCCCCEEEEEEeCC
Confidence 35899999999999998875 57899998 66654433 3466788 999999997 88887554 455555 4
Q ss_pred CC-eEEEEee-cCCc------ccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCC-CCeEEEEe-
Q 017520 146 DG-VENFLSY-VNGS------KLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPS-SNITTLVA- 215 (370)
Q Consensus 146 ~g-~~~~~~~-~~g~------~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~-t~~~~~~~- 215 (370)
+| .+.+... ..+. ....++.+++++||++|+++. ..+.|..|+.+ +++.....
T Consensus 118 ~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~-----------------~~~~v~~~~~~~~g~~~~~~~ 180 (347)
T 3hfq_A 118 DGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDL-----------------GSDKVYVYNVSDAGQLSEQSV 180 (347)
T ss_dssp TSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEET-----------------TTTEEEEEEECTTSCEEEEEE
T ss_pred CCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeC-----------------CCCEEEEEEECCCCcEEEeee
Confidence 55 4433221 1111 123467899999999988875 34577777765 45444321
Q ss_pred ---cCCCCccceEEccCCCEEEEEeCCc--EEEEEeCC--CCCCceeeeccCCC------CCCCceeECCCCC-EEEEEe
Q 017520 216 ---DGFYFANGVALSRDEDYVVVCESWK--CRKYWLKG--ERKGKLETFAENLP------GAPDNINLAPDGT-FWIAII 281 (370)
Q Consensus 216 ---~~~~~p~gi~~~~dg~~l~v~~~~~--l~~~~~~~--~~~~~~~~~~~~~~------g~p~~i~~d~~G~-lwv~~~ 281 (370)
.....|.++++++||+.+|++.... +.+|+++. .+......+. ..+ ..|..+++++||+ +|++..
T Consensus 181 ~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~i~~spdG~~l~v~~~ 259 (347)
T 3hfq_A 181 LTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVK-TIPADYTAHNGAAAIRLSHDGHFLYVSNR 259 (347)
T ss_dssp EECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEE-SSCTTCCSCCEEEEEEECTTSCEEEEEEE
T ss_pred EEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeee-ecCCCCCCCCcceeEEECCCCCEEEEEeC
Confidence 2234678899999999999987654 77777763 2111111111 122 2356699999997 777765
Q ss_pred cCchhHHHhhhcchhHHHHHHhCCccccccccCCCceEEEEECCCCcE--EEEEeCCCCCccccceeEEEE-C-CEEEEE
Q 017520 282 KLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAEDGTI--IRNLVDPTGQLMSFVTSGLQV-D-NHLYVI 357 (370)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~g~~--~~~~~~~~g~~~~~~t~~~~~-~-g~L~~g 357 (370)
... .-.++.++.+|+. +..+... +. .+..+... + ..||++
T Consensus 260 ~~~--------------------------------~v~v~~~~~~g~~~~~~~~~~~-~~---~~~~~~~spdg~~l~v~ 303 (347)
T 3hfq_A 260 GYN--------------------------------TLAVFAVTADGHLTLIQQISTE-GD---FPRDFDLDPTEAFVVVV 303 (347)
T ss_dssp TTT--------------------------------EEEEEEECGGGCEEEEEEEECS-SS---CCCEEEECTTSSEEEEE
T ss_pred CCC--------------------------------EEEEEEECCCCcEEEeEEEecC-CC---CcCeEEECCCCCEEEEE
Confidence 431 1123444444533 3333331 21 23344443 3 468888
Q ss_pred eCCCCeEEEEeC
Q 017520 358 SLTSNFIGKVQL 369 (370)
Q Consensus 358 s~~~~~i~~~~~ 369 (370)
+..++.|.++++
T Consensus 304 ~~~~~~v~v~~~ 315 (347)
T 3hfq_A 304 NQNTDNATLYAR 315 (347)
T ss_dssp ETTTTEEEEEEE
T ss_pred EcCCCcEEEEEE
Confidence 888888887754
No 60
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.60 E-value=1.1e-13 Score=138.25 Aligned_cols=182 Identities=15% Similarity=0.118 Sum_probs=136.1
Q ss_pred CcCCCcceEEcC-CCcEEEEe-cCCeEEEEe-CCeE--EEEEe------cCCCceeceEEcCC-CcEEEEeCCCc-eEEE
Q 017520 77 SVNHPEDASMDK-NGVIYTAT-RDGWIKRLQ-DGTW--VNWKF------IDSQTLVGLTSTKE-GHLIICDNANG-LHKV 143 (370)
Q Consensus 77 ~~~~P~~i~~d~-~G~l~v~~-~~g~I~~~~-~g~~--~~~~~------~~~~p~~gl~~d~~-G~L~v~~~~~g-i~~~ 143 (370)
.+..+..|++|. ++.||+++ .+++|++++ +|.. +.+.. ....|. ||++|.. ++||+++...+ |..+
T Consensus 338 ~~~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~-glAvD~~~~nLY~td~~~~~I~v~ 416 (628)
T 4a0p_A 338 SLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVSSVPSQNLEIQPY-DLSIDIYSRYIYWTCEATNVINVT 416 (628)
T ss_dssp TCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC--------CCCEE-EEEEETTTTEEEEEETTTTEEEEE
T ss_pred hcCCceEEEEecCCCeEEEEecCcceEEEEEcCCCCceEEEEcccccccccCCcc-eEEeeccCCeEEEEcCCCCEEEEE
Confidence 356788899986 78999999 678999999 6642 33322 345799 9999986 57999997754 5555
Q ss_pred cCCC--eEEEEeecCCcccccccceEEcC-CCcEEEEeCCCCCCCccceecccccCCC-ceEEEEeCCCCeEEEEe-cCC
Q 017520 144 SEDG--VENFLSYVNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPH-GQLLKYDPSSNITTLVA-DGF 218 (370)
Q Consensus 144 ~~~g--~~~~~~~~~g~~~~~~~~l~~d~-~G~l~v~d~~~~~~~~~~~~~~~~~~~~-g~l~~~d~~t~~~~~~~-~~~ 218 (370)
+.+| .+.+... .+..|++|++|| +|.||++|.. .. ++|++.++++...+.+. ..+
T Consensus 417 ~~~G~~~~~l~~~----~l~~Pr~iavdp~~g~ly~tD~g----------------~~~~~I~r~~~dG~~~~~l~~~~l 476 (628)
T 4a0p_A 417 RLDGRSVGVVLKG----EQDRPRAVVVNPEKGYMYFTNLQ----------------ERSPKIERAALDGTEREVLFFSGL 476 (628)
T ss_dssp ETTSCEEEEEEEC----TTCCEEEEEEETTTTEEEEEEEE----------------TTEEEEEEEETTSCSCEEEECSSC
T ss_pred ECCCCeEEEEEeC----CCCceeeEEEecCCCeEEEeecC----------------CCCCeEEEEeCCCCCcEEEEeccC
Confidence 5677 3444332 246799999998 8999999864 22 37999999866665554 468
Q ss_pred CCccceEEccCCCEEEEEeCCc--EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCCEEEEEecC
Q 017520 219 YFANGVALSRDEDYVVVCESWK--CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKL 283 (370)
Q Consensus 219 ~~p~gi~~~~dg~~l~v~~~~~--l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~ 283 (370)
..|+|+++|++++.|||++... |.+++++|. .++.+.......|.+|+++. |++|++....
T Consensus 477 ~~P~gla~D~~~~~LYw~D~~~~~I~~~~~dG~---~r~~~~~~~~~~P~glav~~-~~ly~tD~~~ 539 (628)
T 4a0p_A 477 SKPIALALDSRLGKLFWADSDLRRIESSDLSGA---NRIVLEDSNILQPVGLTVFE-NWLYWIDKQQ 539 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSC---SCEEEECSSCSCEEEEEEET-TEEEEEETTT
T ss_pred CCccEEEEeCCCCEEEEEeCCCCEEEEEeCCCC---ceEEEEcCCCCCcEEEEEEC-CEEEEEECCC
Confidence 8999999999988899999875 999999875 24444433335699999987 7899998765
No 61
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.59 E-value=1.2e-13 Score=125.53 Aligned_cols=177 Identities=18% Similarity=0.222 Sum_probs=126.0
Q ss_pred CCCcceEEcCC-CcEEEEecCCeEEEEe-CCeEEEE-Eec-----CCCceeceEEcCCCcEEEEeCC-------------
Q 017520 79 NHPEDASMDKN-GVIYTATRDGWIKRLQ-DGTWVNW-KFI-----DSQTLVGLTSTKEGHLIICDNA------------- 137 (370)
Q Consensus 79 ~~P~~i~~d~~-G~l~v~~~~g~I~~~~-~g~~~~~-~~~-----~~~p~~gl~~d~~G~L~v~~~~------------- 137 (370)
..|.++++|++ |+||+++..++|++++ +|++..+ ... ...|. ++++|++|++|+++..
T Consensus 71 ~~~~~i~~~~~~g~l~v~~~~~~l~~~d~~g~~~~~~~~~~~~~~~~~~~-~i~~d~~g~l~v~~~~~~~~~~~~~~~~~ 149 (314)
T 1pjx_A 71 GIPAGCQCDRDANQLFVADMRLGLLVVQTDGTFEEIAKKDSEGRRMQGCN-DCAFDYEGNLWITAPAGEVAPADYTRSMQ 149 (314)
T ss_dssp CCEEEEEECSSSSEEEEEETTTEEEEEETTSCEEECCSBCTTSCBCBCCC-EEEECTTSCEEEEECBCBCTTSCCCBTTS
T ss_pred CCCceEEEecCCCcEEEEECCCCEEEEeCCCCEEEEEeccCCCccccCCc-CEEECCCCCEEEEecCccccccccccccc
Confidence 57899999999 9999999766899999 8776655 321 23478 9999999999999864
Q ss_pred ---CceEEEcCCC-eEEEEeecCCcccccccceEEc----CCC-cEEEEeCCCCCCCccceecccccCCCceEEEEeCC-
Q 017520 138 ---NGLHKVSEDG-VENFLSYVNGSKLRFANDVVEA----SDG-SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPS- 207 (370)
Q Consensus 138 ---~gi~~~~~~g-~~~~~~~~~g~~~~~~~~l~~d----~~G-~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~- 207 (370)
.+|++++.++ ...+... ...+++++++ ++| .+|+++. ..++|++||.+
T Consensus 150 ~~~~~l~~~~~~g~~~~~~~~-----~~~~~~i~~~~~~d~dg~~l~v~~~-----------------~~~~i~~~~~~~ 207 (314)
T 1pjx_A 150 EKFGSIYCFTTDGQMIQVDTA-----FQFPNGIAVRHMNDGRPYQLIVAET-----------------PTKKLWSYDIKG 207 (314)
T ss_dssp SSCEEEEEECTTSCEEEEEEE-----ESSEEEEEEEECTTSCEEEEEEEET-----------------TTTEEEEEEEEE
T ss_pred CCCCeEEEECCCCCEEEeccC-----CCCcceEEEecccCCCCCEEEEEEC-----------------CCCeEEEEECCC
Confidence 3689998557 5544322 2357889999 999 6999975 34689999865
Q ss_pred CCeEE---EEe--cC-C-CCccceEEccCCCEEEEEeCC-c-EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCC-EE
Q 017520 208 SNITT---LVA--DG-F-YFANGVALSRDEDYVVVCESW-K-CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGT-FW 277 (370)
Q Consensus 208 t~~~~---~~~--~~-~-~~p~gi~~~~dg~~l~v~~~~-~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~-lw 277 (370)
+++.. .+. .. . ..|.+++++++|+ +|+++.. + |.+|+.++.+. ...+. .....|.+++++++|+ +|
T Consensus 208 ~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-l~v~~~~~~~i~~~d~~~g~~--~~~~~-~~~~~~~~i~~~~dg~~l~ 283 (314)
T 1pjx_A 208 PAKIENKKVWGHIPGTHEGGADGMDFDEDNN-LLVANWGSSHIEVFGPDGGQP--KMRIR-CPFEKPSNLHFKPQTKTIF 283 (314)
T ss_dssp TTEEEEEEEEEECCCCSSCEEEEEEEBTTCC-EEEEEETTTEEEEECTTCBSC--SEEEE-CSSSCEEEEEECTTSSEEE
T ss_pred CCccccceEEEECCCCCCCCCCceEECCCCC-EEEEEcCCCEEEEEcCCCCcE--eEEEe-CCCCCceeEEECCCCCEEE
Confidence 34321 111 11 1 5689999999998 8888743 4 99999762221 12221 1224678899999998 99
Q ss_pred EEEec
Q 017520 278 IAIIK 282 (370)
Q Consensus 278 v~~~~ 282 (370)
+++..
T Consensus 284 v~~~~ 288 (314)
T 1pjx_A 284 VTEHE 288 (314)
T ss_dssp EEETT
T ss_pred EEeCC
Confidence 99865
No 62
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.58 E-value=9.1e-14 Score=126.63 Aligned_cols=180 Identities=13% Similarity=0.137 Sum_probs=128.1
Q ss_pred CCCcceEEcCCCcEEEEec-CCeEEEEe-CCeEEEEEec-----CCCceeceEEcCCCcEEEEeC---------------
Q 017520 79 NHPEDASMDKNGVIYTATR-DGWIKRLQ-DGTWVNWKFI-----DSQTLVGLTSTKEGHLIICDN--------------- 136 (370)
Q Consensus 79 ~~P~~i~~d~~G~l~v~~~-~g~I~~~~-~g~~~~~~~~-----~~~p~~gl~~d~~G~L~v~~~--------------- 136 (370)
..|.++++|++|++|+++. +++|++++ +|+++.+... ...|+ +++++++|++|++|.
T Consensus 86 ~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~-~i~~d~dG~l~~td~~~g~~~~~~~~~~~~ 164 (305)
T 3dr2_A 86 AFTNGNAVDAQQRLVHCEHGRRAITRSDADGQAHLLVGRYAGKRLNSPN-DLIVARDGAIWFTDPPFGLRKPSQGCPADP 164 (305)
T ss_dssp SCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEECEETTEECSCCC-CEEECTTSCEEEECCSGGGSCGGGSCCCCC
T ss_pred CccceeeECCCCCEEEEECCCCEEEEECCCCCEEEEEeccCCCccCCCC-CEEECCCCCEEEeCcCCCcccccccccccc
Confidence 4689999999999999984 47899999 8887666432 24578 899999999999752
Q ss_pred ---CCceEEEcC-CC-eEEEEeecCCcccccccceEEcCCCc-EEEEeCCCCCCCccceecccccCCCceEEEEeCCCCe
Q 017520 137 ---ANGLHKVSE-DG-VENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNI 210 (370)
Q Consensus 137 ---~~gi~~~~~-~g-~~~~~~~~~g~~~~~~~~l~~d~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~ 210 (370)
..+|+++++ +| ++.+. . +..++++++++||+ ||+++.... ....+.|++|+.+++.
T Consensus 165 ~~~~~~v~~~d~~~g~~~~~~-~-----~~~p~gl~~spdg~~lyv~~~~~~------------~~~~~~i~~~~~~~~~ 226 (305)
T 3dr2_A 165 ELAHHSVYRLPPDGSPLQRMA-D-----LDHPNGLAFSPDEQTLYVSQTPEQ------------GHGSVEITAFAWRDGA 226 (305)
T ss_dssp SSSCEEEEEECSSSCCCEEEE-E-----ESSEEEEEECTTSSEEEEEECCC---------------CCCEEEEEEEETTE
T ss_pred ccCCCeEEEEcCCCCcEEEEe-c-----CCCCcceEEcCCCCEEEEEecCCc------------CCCCCEEEEEEecCCC
Confidence 246999995 67 65543 2 35788999999996 999976310 0013578888876443
Q ss_pred E---EEEec-CCCCccceEEccCCCEEEEEeCCcEEEEEeCCCCCCceeeeccCCCCCCCceeECCCC-CEEEEEecC
Q 017520 211 T---TLVAD-GFYFANGVALSRDEDYVVVCESWKCRKYWLKGERKGKLETFAENLPGAPDNINLAPDG-TFWIAIIKL 283 (370)
Q Consensus 211 ~---~~~~~-~~~~p~gi~~~~dg~~l~v~~~~~l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G-~lwv~~~~~ 283 (370)
. +.+.. ....|.|++++++|+ +|++..++|++|+.++.. ...+. .+..+.++++++++ .||+++..+
T Consensus 227 l~~~~~~~~~~~~~pdgi~~d~~G~-lwv~~~~gv~~~~~~g~~---~~~~~--~~~~~~~~~f~~d~~~L~it~~~~ 298 (305)
T 3dr2_A 227 LHDRRHFASVPDGLPDGFCVDRGGW-LWSSSGTGVCVFDSDGQL---LGHIP--TPGTASNCTFDQAQQRLFITGGPC 298 (305)
T ss_dssp EEEEEEEECCSSSCCCSEEECTTSC-EEECCSSEEEEECTTSCE---EEEEE--CSSCCCEEEECTTSCEEEEEETTE
T ss_pred ccCCeEEEECCCCCCCeEEECCCCC-EEEecCCcEEEECCCCCE---EEEEE--CCCceeEEEEeCCCCEEEEEcCCe
Confidence 2 22221 235689999999999 899885559999976542 22221 23348899998777 599998654
No 63
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.58 E-value=1e-14 Score=147.80 Aligned_cols=181 Identities=13% Similarity=0.101 Sum_probs=130.6
Q ss_pred cCCCcceEEcC-CCcEEEEe-cCCeEEEEe-CC-----eEEEEE-ecCCCceeceEEc-CCCcEEEEeCC-CceEEEcCC
Q 017520 78 VNHPEDASMDK-NGVIYTAT-RDGWIKRLQ-DG-----TWVNWK-FIDSQTLVGLTST-KEGHLIICDNA-NGLHKVSED 146 (370)
Q Consensus 78 ~~~P~~i~~d~-~G~l~v~~-~~g~I~~~~-~g-----~~~~~~-~~~~~p~~gl~~d-~~G~L~v~~~~-~gi~~~~~~ 146 (370)
+..|++|++|+ ++.||+++ .+++|++++ ++ ..+.+. .....|. ||++| ..|+||+++.. +.|.+++.+
T Consensus 405 ~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~-glavD~~~g~LY~tD~~~~~I~v~d~d 483 (699)
T 1n7d_A 405 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD-GLAVDWIHSNIYWTDSVLGTVSVADTK 483 (699)
T ss_dssp CTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CC-CEECCCSSSBCEECCTTTSCEEEEBSS
T ss_pred CcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcc-eEEEEeeCCcEEEEeccCCeEEEEecC
Confidence 56899999996 67999998 668899999 54 222222 2234688 99999 56789999876 568888866
Q ss_pred C--eEEEEeecCCcccccccceEEcC-CCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEE-ecCCCCcc
Q 017520 147 G--VENFLSYVNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLV-ADGFYFAN 222 (370)
Q Consensus 147 g--~~~~~~~~~g~~~~~~~~l~~d~-~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~-~~~~~~p~ 222 (370)
| .+.+.. ..+..|++|++|+ .|.||+++.. ..++|+++++++...+++ ...+..|+
T Consensus 484 g~~~~~l~~----~~~~~P~giavDp~~g~ly~td~~----------------~~~~I~~~~~dG~~~~~l~~~~l~~Pn 543 (699)
T 1n7d_A 484 GVKRKTLFR----EQGSKPRAIVVDPVHGFMYWTDWG----------------TPAKIKKGGLNGVDIYSLVTENIQWPN 543 (699)
T ss_dssp SCCEEEECC----CSSCCCCCEECCSSSSCCEECCCS----------------SSCCEEBCCSSSCCCCEESCSSCSSCC
T ss_pred CCceEEEEe----CCCCCcceEEEccCCCcEEEcccC----------------CCCeEEEEeCCCCCeeEEEeCCCCCcc
Confidence 6 444432 1245789999998 5789999863 236899998875544444 35688999
Q ss_pred ceEEccCCCEEEEEeCCc--EEEEEeCCCCCCceeeecc--CCCCCCCceeECCCCCEEEEEecC
Q 017520 223 GVALSRDEDYVVVCESWK--CRKYWLKGERKGKLETFAE--NLPGAPDNINLAPDGTFWIAIIKL 283 (370)
Q Consensus 223 gi~~~~dg~~l~v~~~~~--l~~~~~~~~~~~~~~~~~~--~~~g~p~~i~~d~~G~lwv~~~~~ 283 (370)
||+++++++.|||++... |.++++++. ..+.+.. .....|.+|++|.+ ++|++....
T Consensus 544 Glavd~~~~~LY~aD~~~~~I~~~d~dG~---~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~ 604 (699)
T 1n7d_A 544 GITLDLLSGRLYWVDSKLHSISSIDVNGG---NRKTILEDEKRLAHPFSLAVFED-KVFWTDIIN 604 (699)
T ss_dssp CEEECTTTCCEEEEETTTTEEEEECSSSS---CCEEECCCSSSCSSCCCCEEETT-EEEEECSTT
T ss_pred EEEEeccCCEEEEEecCCCeEEEEccCCC---ceEEEEecCCcCCCceEeEEECC-EEEEEeCCC
Confidence 999999887899999876 999998763 2333332 12346999999986 677777654
No 64
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=99.58 E-value=8.5e-14 Score=129.75 Aligned_cols=164 Identities=12% Similarity=0.138 Sum_probs=112.6
Q ss_pred ceEecCCCcCCCcceEEcCCCc-EEEEecCCeEEEEe-CCeEEE-EE-------ecCCCceeceEEcC----CCcEEEEe
Q 017520 70 FIKVGEGSVNHPEDASMDKNGV-IYTATRDGWIKRLQ-DGTWVN-WK-------FIDSQTLVGLTSTK----EGHLIICD 135 (370)
Q Consensus 70 ~~~~~~~~~~~P~~i~~d~~G~-l~v~~~~g~I~~~~-~g~~~~-~~-------~~~~~p~~gl~~d~----~G~L~v~~ 135 (370)
+++++.+ +..|.+|+++++|+ |||++..|+|++++ +|+... +. ...+.++ +|++++ +|.||++.
T Consensus 10 ~~~va~~-l~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~-gia~~pdf~~~g~lYv~~ 87 (353)
T 2g8s_A 10 VEVLQDK-LDHPWALAFLPDNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLL-DVVLAPDFAQSRRIWLSY 87 (353)
T ss_dssp EEEEEEE-ESSEEEEEECSTTCCEEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEE-EEEECTTHHHHCEEEEEE
T ss_pred EEEEECC-CCCcEEEEEcCCCCEEEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCce-eEEECCCCCCCCEEEEEE
Confidence 3455554 78999999999999 99999889999999 775432 11 1223568 999998 58999986
Q ss_pred CC--------CceEEEc-C-C-C-e---EEEEeecCC--cccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCC
Q 017520 136 NA--------NGLHKVS-E-D-G-V---ENFLSYVNG--SKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPH 198 (370)
Q Consensus 136 ~~--------~gi~~~~-~-~-g-~---~~~~~~~~g--~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~ 198 (370)
.. ..|.+++ . + + + +.+....+. ...+.++.|++++||.|||+...... ... .-......
T Consensus 88 ~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~--~~~--~q~~~~~~ 163 (353)
T 2g8s_A 88 SEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQ--RPT--AQDLDKLQ 163 (353)
T ss_dssp EEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTC--GGG--GGCTTSCT
T ss_pred eCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCC--CCc--cCCCCCCC
Confidence 43 2578776 2 2 2 2 223332221 23456789999999999999753111 000 00012345
Q ss_pred ceEEEEeCCCC-------------eEEEEecCCCCccceEEccCCCEEEEEeCC
Q 017520 199 GQLLKYDPSSN-------------ITTLVADGFYFANGVALSRDEDYVVVCESW 239 (370)
Q Consensus 199 g~l~~~d~~t~-------------~~~~~~~~~~~p~gi~~~~dg~~l~v~~~~ 239 (370)
++|+|+|+++. ..+++..++.+|.|++++++...||+++.+
T Consensus 164 g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g 217 (353)
T 2g8s_A 164 GKLVRLTDQGEIPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHG 217 (353)
T ss_dssp TEEEEEETTSCCCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEEC
T ss_pred eEEEEECCCCCCCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecC
Confidence 78999999854 456677889999999999954459999986
No 65
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.58 E-value=6.7e-14 Score=133.96 Aligned_cols=181 Identities=13% Similarity=0.137 Sum_probs=125.6
Q ss_pred CcCCCcceEEcCCCcEEEEecCC-----eEEEEe-CCeEE--EEEecCCCceeceEEcC-CCcEEEEeCC-CceEEEcC-
Q 017520 77 SVNHPEDASMDKNGVIYTATRDG-----WIKRLQ-DGTWV--NWKFIDSQTLVGLTSTK-EGHLIICDNA-NGLHKVSE- 145 (370)
Q Consensus 77 ~~~~P~~i~~d~~G~l~v~~~~g-----~I~~~~-~g~~~--~~~~~~~~p~~gl~~d~-~G~L~v~~~~-~gi~~~~~- 145 (370)
.+..|.+|++|++|+||+++..+ .++.+. ++.+. ........|. ++++++ +|+|||++.. +.|+++++
T Consensus 180 ~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~~~~~P~-giavd~~~G~lyv~d~~~~~V~~~d~~ 258 (433)
T 4hw6_A 180 NIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGFTERLSLCNARGAK-TCAVHPQNGKIYYTRYHHAMISSYDPA 258 (433)
T ss_dssp CCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTTCCEEEEEECSSBC-CCEECTTTCCEEECBTTCSEEEEECTT
T ss_pred CCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCeeccccccccCCCC-EEEEeCCCCeEEEEECCCCEEEEEECC
Confidence 46789999999999999998532 466666 33221 2223567899 999999 8999999976 46999995
Q ss_pred CC-e-EEEEeecCCcccccccceEEcCCCc-EEEEeCCCCCCCccceecccccCCCceEEEEeCC--CCeE---EEEec-
Q 017520 146 DG-V-ENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPS--SNIT---TLVAD- 216 (370)
Q Consensus 146 ~g-~-~~~~~~~~g~~~~~~~~l~~d~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~--t~~~---~~~~~- 216 (370)
+| + +.+... .. ....+.|+++++|+ ||++|. .+.+|++++.+ ++.+ ..+..
T Consensus 259 ~g~~~~~~~~~-~~--~~~~~~ia~dpdG~~LYvad~-----------------~~~~I~~~~~d~~~~~~~~~~~~ag~ 318 (433)
T 4hw6_A 259 TGTLTEEEVMM-DT--KGSNFHIVWHPTGDWAYIIYN-----------------GKHCIYRVDYNRETGKLAVPYIVCGQ 318 (433)
T ss_dssp TCCEEEEEEEC-SC--CSSCEEEEECTTSSEEEEEET-----------------TTTEEEEEEBCTTTCCBCCCEEEEEC
T ss_pred CCeEEEEEecc-CC--CCCcccEEEeCCCCEEEEEeC-----------------CCCEEEEEeCCCCCcccCcEEEEEec
Confidence 47 5 444322 11 12445799999997 999987 34688887754 3322 12221
Q ss_pred --------------CCCCccceEE---------ccCCCEEEEEeCCc--EEEEEeCCCCCCceeeeccC-----------
Q 017520 217 --------------GFYFANGVAL---------SRDEDYVVVCESWK--CRKYWLKGERKGKLETFAEN----------- 260 (370)
Q Consensus 217 --------------~~~~p~gi~~---------~~dg~~l~v~~~~~--l~~~~~~~~~~~~~~~~~~~----------- 260 (370)
.+..|.++++ +.+|+ |||++..+ |.+++.+|. ...+...
T Consensus 319 ~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~-lyvaD~~n~~I~~~~~~G~----v~t~~G~g~~~~~G~~dG 393 (433)
T 4hw6_A 319 HSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYD-FYFCDRDSHTVRVLTPEGR----VTTYAGRGNSREWGYVDG 393 (433)
T ss_dssp TTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEE-EEEEETTTTEEEEECTTSE----EEEEECCCTTCSSCCBCE
T ss_pred CCCCccCCCcccceEEcCCccEEEEccccccccCCCCc-EEEEECCCCEEEEECCCCC----EEEEEeCCCCCccccCCC
Confidence 2567999999 77776 99999877 999986542 2222110
Q ss_pred ------CCCCCCceeEC-CCCCEEEEEecC
Q 017520 261 ------LPGAPDNINLA-PDGTFWIAIIKL 283 (370)
Q Consensus 261 ------~~g~p~~i~~d-~~G~lwv~~~~~ 283 (370)
.-..|.+|++| ++|+|||+....
T Consensus 394 ~~~~~~~~~~P~giavd~~~g~lyVaD~~n 423 (433)
T 4hw6_A 394 ELRSQALFNHPTSIAYDMKRKCFYIGDCDN 423 (433)
T ss_dssp ETTTTCBCSSEEEEEEETTTTEEEEEEGGG
T ss_pred ccccccEeCCCcEEEEECCCCEEEEEeCCC
Confidence 01248899999 899999999765
No 66
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.56 E-value=5.9e-14 Score=142.17 Aligned_cols=224 Identities=10% Similarity=0.113 Sum_probs=155.7
Q ss_pred EEcCCCcEEEEecCCeEEEEe-C-CeEEEEEecCCCceeceEEcC-CCcEEEEeCC-CceEEEcCCC------eEEEEee
Q 017520 85 SMDKNGVIYTATRDGWIKRLQ-D-GTWVNWKFIDSQTLVGLTSTK-EGHLIICDNA-NGLHKVSEDG------VENFLSY 154 (370)
Q Consensus 85 ~~d~~G~l~v~~~~g~I~~~~-~-g~~~~~~~~~~~p~~gl~~d~-~G~L~v~~~~-~gi~~~~~~g------~~~~~~~ 154 (370)
+++....|+++.. +.|.+++ + ++...+......|. +|++++ ++.||+++.. +.|++++.++ ...+
T Consensus 373 ~~~~~~~ll~~~~-~~I~~id~~~~~~~~~~~~~~~p~-gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~--- 447 (699)
T 1n7d_A 373 AVGSIAYLFFTNR-HEVRKMTLDRSEYTSLIPNLRNVV-ALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTV--- 447 (699)
T ss_dssp CCSSCCCBCCCCT-TC-CEECTTSCCEECCSCCCTTCC-CCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCB---
T ss_pred ccccceeEEecCc-cceEEEeCCCCcceeeeccCcceE-EEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEE---
Confidence 3345566777764 4688888 4 34555555567889 999996 5689999876 5788888432 1111
Q ss_pred cCCcccccccceEEcC-CCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEe-cCCCCccceEEccCCCE
Q 017520 155 VNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-DGFYFANGVALSRDEDY 232 (370)
Q Consensus 155 ~~g~~~~~~~~l~~d~-~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~-~~~~~p~gi~~~~dg~~ 232 (370)
....+..|.+|++|. .|+||++|. ..++|.+++++++..+++. ..+..|++|+++++++.
T Consensus 448 -i~~~~~~P~glavD~~~g~LY~tD~-----------------~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ 509 (699)
T 1n7d_A 448 -ISRDIQAPDGLAVDWIHSNIYWTDS-----------------VLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGF 509 (699)
T ss_dssp -CCSCC--CCCEECCCSSSBCEECCT-----------------TTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSC
T ss_pred -EeCCCCCcceEEEEeeCCcEEEEec-----------------cCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCc
Confidence 111245788999994 679999986 3468999999877666554 45788999999998777
Q ss_pred EEEEeCC--c-EEEEEeCCCCCCceeeeccCCCCCCCceeECCC-CCEEEEEecCchhHHHhhhcchhHHHHHHhCCccc
Q 017520 233 VVVCESW--K-CRKYWLKGERKGKLETFAENLPGAPDNINLAPD-GTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLF 308 (370)
Q Consensus 233 l~v~~~~--~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~-G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (370)
|||++.+ + |+++++++.. .+.+.......|++|++|++ ++||++....
T Consensus 510 ly~td~~~~~~I~~~~~dG~~---~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~------------------------- 561 (699)
T 1n7d_A 510 MYWTDWGTPAKIKKGGLNGVD---IYSLVTENIQWPNGITLDLLSGRLYWVDSKL------------------------- 561 (699)
T ss_dssp CEECCCSSSCCEEBCCSSSCC---CCEESCSSCSSCCCEEECTTTCCEEEEETTT-------------------------
T ss_pred EEEcccCCCCeEEEEeCCCCC---eeEEEeCCCCCccEEEEeccCCEEEEEecCC-------------------------
Confidence 9999864 3 9999987742 22232222346999999975 6899998654
Q ss_pred cccccCCCceEEEEECCCCcEEEEEeCCCCCccccceeEEEECCEEEEEeCCCCeEEEEeC
Q 017520 309 SQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIGKVQL 369 (370)
Q Consensus 309 ~~~~~~~~~g~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~~g~L~~gs~~~~~i~~~~~ 369 (370)
..|.+++.+|...+.+....+. ......+...+++||+....++.|.+++.
T Consensus 562 ---------~~I~~~d~dG~~~~~~~~~~~~-~~~P~glavd~~~lywtd~~~~~V~~~d~ 612 (699)
T 1n7d_A 562 ---------HSISSIDVNGGNRKTILEDEKR-LAHPFSLAVFEDKVFWTDIINEAIFSANR 612 (699)
T ss_dssp ---------TEEEEECSSSSCCEEECCCSSS-CSSCCCCEEETTEEEEECSTTTCEEEEET
T ss_pred ---------CeEEEEccCCCceEEEEecCCc-CCCceEeEEECCEEEEEeCCCCeEEEEEc
Confidence 3588999988766666443222 23344555567899999999999999864
No 67
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.56 E-value=1.5e-13 Score=131.51 Aligned_cols=181 Identities=12% Similarity=0.131 Sum_probs=124.1
Q ss_pred CcCCCcceEEcCCCc-EEEEecC-C----eEEEEe-CCeEE--EEEecCCCceeceEEcC-CCcEEEEeCC-CceEEEcC
Q 017520 77 SVNHPEDASMDKNGV-IYTATRD-G----WIKRLQ-DGTWV--NWKFIDSQTLVGLTSTK-EGHLIICDNA-NGLHKVSE 145 (370)
Q Consensus 77 ~~~~P~~i~~d~~G~-l~v~~~~-g----~I~~~~-~g~~~--~~~~~~~~p~~gl~~d~-~G~L~v~~~~-~gi~~~~~ 145 (370)
.+..|.+|++|++|+ ||+++.. + .++.++ +|.+. ........|. ++++++ +|.||+++.. +.|++++.
T Consensus 177 ~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~~~l~~~~~p~-giavdp~~g~lyv~d~~~~~V~~~~~ 255 (430)
T 3tc9_A 177 GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFKVITELTKGQNCN-GAETHPINGELYFNSWNAGQVFRYDF 255 (430)
T ss_dssp CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSCSEEEEEECSSCC-CEEECTTTCCEEEEETTTTEEEEEET
T ss_pred CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCceeeeeeeccCCCce-EEEEeCCCCEEEEEECCCCEEEEEEC
Confidence 356899999999998 9999842 2 466677 55432 2223456799 999999 8999999976 56999995
Q ss_pred CC--eEEEEeecCCcccccccceEEcCCCc-EEEEeCCCCCCCccceecccccCCCceEEEEeCCC--CeE---EEEec-
Q 017520 146 DG--VENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSS--NIT---TLVAD- 216 (370)
Q Consensus 146 ~g--~~~~~~~~~g~~~~~~~~l~~d~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t--~~~---~~~~~- 216 (370)
++ ...+... .+ ...|++|+++++|+ ||+++. ...+|++++.+. +.+ ..+..
T Consensus 256 ~~~~~~~~~~~-~~--~~~P~gia~~pdG~~lyv~d~-----------------~~~~I~~~~~d~~~~~~~~~~~~ag~ 315 (430)
T 3tc9_A 256 TTQETTPLFTI-QD--SGWEFHIQFHPSGNYAYIVVV-----------------NQHYILRSDYDWKTKRLTTPYIVCGQ 315 (430)
T ss_dssp TTTEEEEEEEC-SS--SSCCEEEEECTTSSEEEEEET-----------------TTTEEEEEEEETTTTEECCCEEEEEC
T ss_pred CCCcEEEEEEc-CC--CCcceeEEEcCCCCEEEEEEC-----------------CCCEEEEEeCCcccccccceEEEecc
Confidence 54 4333322 11 24789999999998 999986 346788876542 222 22221
Q ss_pred --------------CCCCcc-ceEEc--------cCCCEEEEEeCCc--EEEEEeCCCCCCceeeeccC----C------
Q 017520 217 --------------GFYFAN-GVALS--------RDEDYVVVCESWK--CRKYWLKGERKGKLETFAEN----L------ 261 (370)
Q Consensus 217 --------------~~~~p~-gi~~~--------~dg~~l~v~~~~~--l~~~~~~~~~~~~~~~~~~~----~------ 261 (370)
.+..|. |++++ ++|+ |||+++.+ |.+++.+| ....+... .
T Consensus 316 ~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~-lyvaD~~n~~I~~i~~~G----~v~~~~g~g~~~~~G~~dG 390 (430)
T 3tc9_A 316 QGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYD-FYFCDRENHCIRILTPQG----RVTTFAGRGSNGTSGYNDG 390 (430)
T ss_dssp TTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEE-EEEEEGGGTEEEEECTTS----EEEEEEECCTTSSSSCBCE
T ss_pred CCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCe-EEEEECCCcEEEEECCCC----cEEEEEeCCCCCCCcccCC
Confidence 255688 88885 4465 99999876 99998554 22222111 0
Q ss_pred -------CCCCCceeECC-CCCEEEEEecC
Q 017520 262 -------PGAPDNINLAP-DGTFWIAIIKL 283 (370)
Q Consensus 262 -------~g~p~~i~~d~-~G~lwv~~~~~ 283 (370)
-..|.+|++|+ +|+|||+....
T Consensus 391 ~~~~~~~~~~P~giavd~~~g~lyVaD~~n 420 (430)
T 3tc9_A 391 DLRQEARFNHPEGIVYDEERECFFIGDREN 420 (430)
T ss_dssp ETTTTCBCSSEEEEEEETTTTEEEEEEGGG
T ss_pred CchhhcEeCCCcEEEEECCCCEEEEEECCC
Confidence 12599999998 68999998765
No 68
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.55 E-value=4.2e-13 Score=122.79 Aligned_cols=214 Identities=16% Similarity=0.170 Sum_probs=139.0
Q ss_pred cceEEcCCCcEEEEecCCeEEEEe-CCeEEE-EEecCCCceeceEEcCCCcEEEEeCCCceEEEcCCC-eEEEEeecCCc
Q 017520 82 EDASMDKNGVIYTATRDGWIKRLQ-DGTWVN-WKFIDSQTLVGLTSTKEGHLIICDNANGLHKVSEDG-VENFLSYVNGS 158 (370)
Q Consensus 82 ~~i~~d~~G~l~v~~~~g~I~~~~-~g~~~~-~~~~~~~p~~gl~~d~~G~L~v~~~~~gi~~~~~~g-~~~~~~~~~g~ 158 (370)
.++++|++|.||+++.+ |++++ +|+... +........ ...+. +|.||++...+++++++.+| ....... ..
T Consensus 63 ~~~~~~~~g~l~v~t~~--l~~~d~~g~~~~~~~~~~~~~~-~~~~~-~~~l~v~t~~~~l~~~d~~g~~~~~~~~-~~- 136 (330)
T 3hxj_A 63 CRPSIGKDGTIYFGSDK--VYAINPDGTEKWRFDTKKAIVS-DFTIF-EDILYVTSMDGHLYAINTDGTEKWRFKT-KK- 136 (330)
T ss_dssp ECCEETTTTEECCSSCE--EEEECCCGGGGGGSCC-----C-CEEEE-TTEEEEECTTSEEEEECTTSCEEEEEEC-SS-
T ss_pred cceEEecCCcEEEecCc--EEEECCCCcEEEEEECCCCccc-CceEE-CCEEEEEecCCEEEEEcCCCCEEEEEcC-CC-
Confidence 46788889999999855 99998 654221 111111112 34444 88999998778899999557 3322221 11
Q ss_pred ccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeE-EEEecCCCCccceEEccCCCEEEEEe
Q 017520 159 KLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNIT-TLVADGFYFANGVALSRDEDYVVVCE 237 (370)
Q Consensus 159 ~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~-~~~~~~~~~p~gi~~~~dg~~l~v~~ 237 (370)
.....++++++|++|++.. .++|+++|++ ++. ............++++.+++ +|++.
T Consensus 137 --~~~~~~~~~~~g~l~vgt~------------------~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~-l~v~t 194 (330)
T 3hxj_A 137 --AIYATPIVSEDGTIYVGSN------------------DNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGT-IYFGS 194 (330)
T ss_dssp --CCCSCCEECTTSCEEEECT------------------TSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCC-EEEES
T ss_pred --ceeeeeEEcCCCEEEEEcC------------------CCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCE-EEEEe
Confidence 2456678899999999853 3789999998 543 33333334456678888887 88888
Q ss_pred CCcEEEEEeCCCCCCceeeeccCCCCCCCceeECCCCCEEEEEecCchhHHHhhhcchhHHHHHHhCCccccccccCCCc
Q 017520 238 SWKCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGG 317 (370)
Q Consensus 238 ~~~l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (370)
++|++++.++. ....+. ........++.|++|++|+++..+
T Consensus 195 -~~l~~~d~~g~---~~~~~~-~~~~~~~~~~~~~~g~l~v~t~~~---------------------------------- 235 (330)
T 3hxj_A 195 -DKVYAINPDGT---EKWNFY-AGYWTVTRPAISEDGTIYVTSLDG---------------------------------- 235 (330)
T ss_dssp -SSEEEECTTSC---EEEEEC-CSSCCCSCCEECTTSCEEEEETTT----------------------------------
T ss_pred -CEEEEECCCCc---EEEEEc-cCCcceeceEECCCCeEEEEcCCC----------------------------------
Confidence 55999983332 111111 122346678899999999998753
Q ss_pred eEEEEECCCCcEEEEEeCCCCCccccceeEEEE-CCEEEEEeCCCCeEEEEe
Q 017520 318 AHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQ 368 (370)
Q Consensus 318 g~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~-~g~L~~gs~~~~~i~~~~ 368 (370)
.+++++++|+.++.+....+. .+..... +|+||+++..+ .|.+++
T Consensus 236 -gl~~~~~~g~~~~~~~~~~~~----~~~~~~~~~g~l~v~t~~g-gl~~~d 281 (330)
T 3hxj_A 236 -HLYAINPDGTEKWRFKTGKRI----ESSPVIGNTDTIYFGSYDG-HLYAIN 281 (330)
T ss_dssp -EEEEECTTSCEEEEEECSSCC----CSCCEECTTSCEEEECTTC-EEEEEC
T ss_pred -eEEEECCCCCEeEEeeCCCCc----cccceEcCCCeEEEecCCC-CEEEEC
Confidence 489999999999888765432 2233334 78999999764 455544
No 69
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.53 E-value=3.3e-13 Score=122.46 Aligned_cols=177 Identities=10% Similarity=0.044 Sum_probs=125.6
Q ss_pred CCCcceEEcCCCcEEEEecCCeEEEEe--CCeEEEEEec-----CCCceeceEEcCCCcEEEEeCC------------Cc
Q 017520 79 NHPEDASMDKNGVIYTATRDGWIKRLQ--DGTWVNWKFI-----DSQTLVGLTSTKEGHLIICDNA------------NG 139 (370)
Q Consensus 79 ~~P~~i~~d~~G~l~v~~~~g~I~~~~--~g~~~~~~~~-----~~~p~~gl~~d~~G~L~v~~~~------------~g 139 (370)
..|.+++++++|++|+++ +++|++++ +++++.+... ..+++ ++++|++|++|+++.. .+
T Consensus 54 ~~~~~i~~~~dG~l~v~~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~-di~~d~dG~l~~~~~~~~~~~~~~~~~~~~ 131 (297)
T 3g4e_A 54 APVSSVALRQSGGYVATI-GTKFCALNWKEQSAVVLATVDNDKKNNRFN-DGKVDPAGRYFAGTMAEETAPAVLERHQGA 131 (297)
T ss_dssp SCEEEEEEBTTSSEEEEE-TTEEEEEETTTTEEEEEEECCTTCSSEEEE-EEEECTTSCEEEEEEECCSBTTBCCTTCEE
T ss_pred CceEEEEECCCCCEEEEE-CCeEEEEECCCCcEEEEEecCCCCCCCCCC-CEEECCCCCEEEecCCcccccccccCCCcE
Confidence 468899999999999998 56799999 6777766543 23577 8999999999998732 36
Q ss_pred eEEEcCCC-eEEEEeecCCcccccccceEEcCCCc-EEEEeCCCCCCCccceecccccCCCceEEEEeC--CCCeE---E
Q 017520 140 LHKVSEDG-VENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDP--SSNIT---T 212 (370)
Q Consensus 140 i~~~~~~g-~~~~~~~~~g~~~~~~~~l~~d~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~--~t~~~---~ 212 (370)
|++++++| ...+... +..+|++++++||+ +|++++ ..++|++|+. .++.. +
T Consensus 132 l~~~d~~g~~~~~~~~-----~~~pngi~~spdg~~lyv~~~-----------------~~~~i~~~~~d~~~G~~~~~~ 189 (297)
T 3g4e_A 132 LYSLFPDHHVKKYFDQ-----VDISNGLDWSLDHKIFYYIDS-----------------LSYSVDAFDYDLQTGQISNRR 189 (297)
T ss_dssp EEEECTTSCEEEEEEE-----ESBEEEEEECTTSCEEEEEEG-----------------GGTEEEEEEECTTTCCEEEEE
T ss_pred EEEEECCCCEEEEeec-----cccccceEEcCCCCEEEEecC-----------------CCCcEEEEeccCCCCcccCcE
Confidence 89998767 5444332 34689999999995 999976 3467888874 45543 2
Q ss_pred EEe---cCCCCccceEEccCCCEEEEEeCCc--EEEEEeCCCCCCceeeeccCCCCCCCceeEC-CCC-CEEEEEecC
Q 017520 213 LVA---DGFYFANGVALSRDEDYVVVCESWK--CRKYWLKGERKGKLETFAENLPGAPDNINLA-PDG-TFWIAIIKL 283 (370)
Q Consensus 213 ~~~---~~~~~p~gi~~~~dg~~l~v~~~~~--l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d-~~G-~lwv~~~~~ 283 (370)
.+. .....|.|++++++|+ +|++...+ |.+|++++. +...........|.+++++ +++ .|||++...
T Consensus 190 ~~~~~~~~~~~p~g~~~d~~G~-lwva~~~~~~v~~~d~~tG---~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 190 SVYKLEKEEQIPDGMCIDAEGK-LWVACYNGGRVIRLDPVTG---KRLQTVKLPVDKTTSCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp EEEECCGGGCEEEEEEEBTTSC-EEEEEETTTEEEEECTTTC---CEEEEEECSSSBEEEEEEESGGGCEEEEEEBCT
T ss_pred EEEECCCCCCCCCeeEECCCCC-EEEEEcCCCEEEEEcCCCc---eEEEEEECCCCCceEEEEeCCCCCEEEEEcCCc
Confidence 222 1234689999999997 89988655 999997632 2211121111357788996 565 599998654
No 70
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.53 E-value=1.6e-12 Score=119.40 Aligned_cols=178 Identities=13% Similarity=0.136 Sum_probs=123.6
Q ss_pred CCCcceEEcCCCcEEEEecC-----CeEEEEe--CCeEEEEEe---cCCCceeceEEcCCCcEEEEeCC-------CceE
Q 017520 79 NHPEDASMDKNGVIYTATRD-----GWIKRLQ--DGTWVNWKF---IDSQTLVGLTSTKEGHLIICDNA-------NGLH 141 (370)
Q Consensus 79 ~~P~~i~~d~~G~l~v~~~~-----g~I~~~~--~g~~~~~~~---~~~~p~~gl~~d~~G~L~v~~~~-------~gi~ 141 (370)
..|.++++|++|++|+++.. ++|++++ +++.+.+.. ....+. +++++++|++|+++.. .+|+
T Consensus 87 ~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~-~i~~d~~g~l~v~~~~~~~~~~~~~l~ 165 (333)
T 2dg1_A 87 ANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCID-DMVFDSKGGFYFTDFRGYSTNPLGGVY 165 (333)
T ss_dssp SSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEE-EEEECTTSCEEEEECCCBTTBCCEEEE
T ss_pred CCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCccc-ceEECCCCCEEEEeccccccCCCceEE
Confidence 46899999999999999844 4899999 445553332 234678 9999999999999863 4699
Q ss_pred EEcC-CC-eEEEEeecCCcccccccceEEcCCCc-EEEEeCCCCCCCccceecccccCCCceEEEEeCCC--CeEEEE--
Q 017520 142 KVSE-DG-VENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSS--NITTLV-- 214 (370)
Q Consensus 142 ~~~~-~g-~~~~~~~~~g~~~~~~~~l~~d~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t--~~~~~~-- 214 (370)
+++. ++ +..+... ...+++++++++|+ +|+++. ..++|++||.++ +....+
T Consensus 166 ~~~~~~~~~~~~~~~-----~~~~~~i~~~~dg~~l~v~~~-----------------~~~~i~~~d~~~~g~~~~~~~~ 223 (333)
T 2dg1_A 166 YVSPDFRTVTPIIQN-----ISVANGIALSTDEKVLWVTET-----------------TANRLHRIALEDDGVTIQPFGA 223 (333)
T ss_dssp EECTTSCCEEEEEEE-----ESSEEEEEECTTSSEEEEEEG-----------------GGTEEEEEEECTTSSSEEEEEE
T ss_pred EEeCCCCEEEEeecC-----CCcccceEECCCCCEEEEEeC-----------------CCCeEEEEEecCCCcCcccccc
Confidence 9984 44 5444322 23578899999996 999975 246899998743 222211
Q ss_pred -----ecCCCCccceEEccCCCEEEEEeCC-c-EEEEEeCCCCCCceeeeccCCC--C---CCCceeECCCC-CEEEEEe
Q 017520 215 -----ADGFYFANGVALSRDEDYVVVCESW-K-CRKYWLKGERKGKLETFAENLP--G---APDNINLAPDG-TFWIAII 281 (370)
Q Consensus 215 -----~~~~~~p~gi~~~~dg~~l~v~~~~-~-l~~~~~~~~~~~~~~~~~~~~~--g---~p~~i~~d~~G-~lwv~~~ 281 (370)
..+...|.+++++++|+ +|++... + |.+|+.++. ....+..... + .|.++++++|| +||+++.
T Consensus 224 ~~~~~~~~~~~~~~i~~d~~G~-l~v~~~~~~~v~~~d~~g~---~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~ 299 (333)
T 2dg1_A 224 TIPYYFTGHEGPDSCCIDSDDN-LYVAMYGQGRVLVFNKRGY---PIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSN 299 (333)
T ss_dssp EEEEECCSSSEEEEEEEBTTCC-EEEEEETTTEEEEECTTSC---EEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEE
T ss_pred eEEEecCCCCCCCceEECCCCC-EEEEEcCCCEEEEECCCCC---EEEEEEcCCCccccccCcceEEECCCCCEEEEEeC
Confidence 11224688999999998 8888754 3 999987543 2222221110 1 58889999887 7999987
Q ss_pred cC
Q 017520 282 KL 283 (370)
Q Consensus 282 ~~ 283 (370)
.+
T Consensus 300 ~g 301 (333)
T 2dg1_A 300 DI 301 (333)
T ss_dssp CG
T ss_pred cc
Confidence 65
No 71
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.53 E-value=1.1e-11 Score=113.38 Aligned_cols=233 Identities=9% Similarity=0.094 Sum_probs=147.6
Q ss_pred cCCCcceEEcCCCc-EEEEec-CCeEEEEe--CCeE-EEEEecCCCceec-eEEcCCCcEEEEeCCC----ceEEEc-CC
Q 017520 78 VNHPEDASMDKNGV-IYTATR-DGWIKRLQ--DGTW-VNWKFIDSQTLVG-LTSTKEGHLIICDNAN----GLHKVS-ED 146 (370)
Q Consensus 78 ~~~P~~i~~d~~G~-l~v~~~-~g~I~~~~--~g~~-~~~~~~~~~p~~g-l~~d~~G~L~v~~~~~----gi~~~~-~~ 146 (370)
...| +++++++|. +|+++. ++.|+.++ +++. .........|. . ++++++|+.+++.... .|..++ .+
T Consensus 40 ~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~-~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~ 117 (331)
T 3u4y_A 40 YDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSM-ADVDITPDDQFAVTVTGLNHPFNMQSYSFLK 117 (331)
T ss_dssp CCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCC-CCEEECTTSSEEEECCCSSSSCEEEEEETTT
T ss_pred CCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCc-cceEECCCCCEEEEecCCCCcccEEEEECCC
Confidence 3456 999999996 888884 78999999 6665 44444556677 6 9999999744344343 577788 55
Q ss_pred C-eEEEEeecCCcccccccceEEcCCCc-EEEEeCCCCCCCccceecccccCCCce-EEEEeCCC-CeE----EEEecCC
Q 017520 147 G-VENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQ-LLKYDPSS-NIT----TLVADGF 218 (370)
Q Consensus 147 g-~~~~~~~~~g~~~~~~~~l~~d~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~-l~~~d~~t-~~~----~~~~~~~ 218 (370)
+ ...... .+ ..++.+++++||+ +|+++.. .+. +..|+.+. +.. .......
T Consensus 118 ~~~~~~~~--~~---~~~~~~~~spdg~~l~~~~~~-----------------~~~~i~~~~~~~~g~~~~~~~~~~~~~ 175 (331)
T 3u4y_A 118 NKFISTIP--IP---YDAVGIAISPNGNGLILIDRS-----------------SANTVRRFKIDADGVLFDTGQEFISGG 175 (331)
T ss_dssp TEEEEEEE--CC---TTEEEEEECTTSSCEEEEEET-----------------TTTEEEEEEECTTCCEEEEEEEEECSS
T ss_pred CCeEEEEE--CC---CCccceEECCCCCEEEEEecC-----------------CCceEEEEEECCCCcEeecCCccccCC
Confidence 6 322222 11 3568999999995 8888652 233 44444321 222 1122334
Q ss_pred CCccceEEccCCCEEEEEeCCc--EEEEEeCCCCCCc-eeeeccCCCCCCCceeECCCCC-EEEEEecCchhHHHhhhcc
Q 017520 219 YFANGVALSRDEDYVVVCESWK--CRKYWLKGERKGK-LETFAENLPGAPDNINLAPDGT-FWIAIIKLDARRMKILNSS 294 (370)
Q Consensus 219 ~~p~gi~~~~dg~~l~v~~~~~--l~~~~~~~~~~~~-~~~~~~~~~g~p~~i~~d~~G~-lwv~~~~~~~~~~~~~~~~ 294 (370)
..|.++++++||+.+|++.... |.+|++++.+... ...+. ....|.++++++||+ +|++....
T Consensus 176 ~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~--~~~~~~~~~~spdg~~l~v~~~~~----------- 242 (331)
T 3u4y_A 176 TRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVG--TNNLPGTIVVSRDGSTVYVLTEST----------- 242 (331)
T ss_dssp SSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEE--CSSCCCCEEECTTSSEEEEECSSE-----------
T ss_pred CCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeecc--CCCCCceEEECCCCCEEEEEEcCC-----------
Confidence 5689999999999999998654 9999987543211 22222 235688999999998 77775432
Q ss_pred hhHHHHHHhCCccccccccCCCceEEEEECCC-CcE--EEEEeCC---CCCccccceeEEEE--CCEEEEEeCCCCeEEE
Q 017520 295 KLIKHVLAAYPKLFSQFITLGGGAHLIHVAED-GTI--IRNLVDP---TGQLMSFVTSGLQV--DNHLYVISLTSNFIGK 366 (370)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~-g~~--~~~~~~~---~g~~~~~~t~~~~~--~g~L~~gs~~~~~i~~ 366 (370)
+.+..+|.+ |++ +..+... .+........+... +..||+++..++.|.+
T Consensus 243 -----------------------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v 299 (331)
T 3u4y_A 243 -----------------------VDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKV 299 (331)
T ss_dssp -----------------------EEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEE
T ss_pred -----------------------CEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEE
Confidence 457778865 555 3333322 11111111223333 3579999999999988
Q ss_pred EeCC
Q 017520 367 VQLS 370 (370)
Q Consensus 367 ~~~~ 370 (370)
++++
T Consensus 300 ~d~~ 303 (331)
T 3u4y_A 300 FTIS 303 (331)
T ss_dssp EETT
T ss_pred EEec
Confidence 8763
No 72
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.52 E-value=2e-11 Score=112.35 Aligned_cols=215 Identities=14% Similarity=0.182 Sum_probs=145.9
Q ss_pred CCCcceEEcCCCc-EEEEe-cCCeEEEEe--CCeEEEEEec-CC---------CceeceEEcCCCc-EEEEeCC--CceE
Q 017520 79 NHPEDASMDKNGV-IYTAT-RDGWIKRLQ--DGTWVNWKFI-DS---------QTLVGLTSTKEGH-LIICDNA--NGLH 141 (370)
Q Consensus 79 ~~P~~i~~d~~G~-l~v~~-~~g~I~~~~--~g~~~~~~~~-~~---------~p~~gl~~d~~G~-L~v~~~~--~gi~ 141 (370)
..|.+++++++|. +|+++ .++.|..++ +++....... .+ .|. +++++++|+ +|+++.. ..|+
T Consensus 89 ~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~~i~ 167 (353)
T 3vgz_A 89 LKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPR-ELVADDATNTVYISGIGKESVIW 167 (353)
T ss_dssp SCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEE-EEEEETTTTEEEEEEESSSCEEE
T ss_pred CCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCc-eEEECCCCCEEEEEecCCCceEE
Confidence 3689999999886 89887 468999999 5665333222 11 267 899999986 8888742 4588
Q ss_pred EEc-CCC-eEEEEeecCCcccccccceEEcCCCc-EEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEec--
Q 017520 142 KVS-EDG-VENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD-- 216 (370)
Q Consensus 142 ~~~-~~g-~~~~~~~~~g~~~~~~~~l~~d~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~-- 216 (370)
.++ .++ ....... .+ ..++.++++++|+ +|+++. ++.|+.+|..+++......
T Consensus 168 ~~d~~~~~~~~~~~~-~~---~~~~~~~~s~dg~~l~~~~~------------------~~~i~~~d~~~~~~~~~~~~~ 225 (353)
T 3vgz_A 168 VVDGGNIKLKTAIQN-TG---KMSTGLALDSEGKRLYTTNA------------------DGELITIDTADNKILSRKKLL 225 (353)
T ss_dssp EEETTTTEEEEEECC-CC---TTCCCCEEETTTTEEEEECT------------------TSEEEEEETTTTEEEEEEECC
T ss_pred EEcCCCCceEEEecC-CC---CccceEEECCCCCEEEEEcC------------------CCeEEEEECCCCeEEEEEEcC
Confidence 888 556 3322221 11 3578899999986 777753 3689999998887654332
Q ss_pred ---CCCCccceEEccCCCEEEEEeCCc--EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCC-EEEEEecCchhHHHh
Q 017520 217 ---GFYFANGVALSRDEDYVVVCESWK--CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGT-FWIAIIKLDARRMKI 290 (370)
Q Consensus 217 ---~~~~p~gi~~~~dg~~l~v~~~~~--l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~-lwv~~~~~~~~~~~~ 290 (370)
....+.++++++||+.+|+++... |++||+++.+. ...+. . +.+.+++++++|+ +|++....
T Consensus 226 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~--~~~~~--~-~~~~~~~~s~dg~~l~v~~~~~------- 293 (353)
T 3vgz_A 226 DDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNI--LAKVA--A-PESLAVLFNPARNEAYVTHRQA------- 293 (353)
T ss_dssp CSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCE--EEEEE--C-SSCCCEEEETTTTEEEEEETTT-------
T ss_pred CCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcE--EEEEE--c-CCCceEEECCCCCEEEEEECCC-------
Confidence 133467899999999999998764 99999865422 22221 1 2357899999997 88887543
Q ss_pred hhcchhHHHHHHhCCccccccccCCCceEEEEECC-CCcEEEEEeCCCCCccccceeEEEE-C-CEEEEEeCC
Q 017520 291 LNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQV-D-NHLYVISLT 360 (370)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~-~g~~~~~~~~~~g~~~~~~t~~~~~-~-g~L~~gs~~ 360 (370)
+.+..+|. .++++..+.... .+..+... + ..||+++..
T Consensus 294 ---------------------------~~v~~~d~~~~~~~~~~~~~~-----~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 294 ---------------------------GKVSVIDAKSYKVVKTFDTPT-----HPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp ---------------------------TEEEEEETTTTEEEEEEECCS-----EEEEEEECTTSCEEEEEEEC
T ss_pred ---------------------------CeEEEEECCCCeEEEEEecCC-----CCCeEEEcCCCCEEEEEEcc
Confidence 35788886 577777776533 23444443 4 459998776
No 73
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.51 E-value=6.8e-12 Score=112.77 Aligned_cols=212 Identities=14% Similarity=0.166 Sum_probs=143.5
Q ss_pred CCcEEEEecCCeEEEEe--CCeEEEEEecC--CCceeceEEcCCCcEEEEeCCCceEEEcCCC-eEEEEeecCCcccccc
Q 017520 89 NGVIYTATRDGWIKRLQ--DGTWVNWKFID--SQTLVGLTSTKEGHLIICDNANGLHKVSEDG-VENFLSYVNGSKLRFA 163 (370)
Q Consensus 89 ~G~l~v~~~~g~I~~~~--~g~~~~~~~~~--~~p~~gl~~d~~G~L~v~~~~~gi~~~~~~g-~~~~~~~~~g~~~~~~ 163 (370)
+..|++++.++.|+.++ +|+...-.... ..++ +++++++|+++++ ...+++.++++| +..-.....+ ..+
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~-~~~~~pdG~ilvs-~~~~V~~~d~~G~~~W~~~~~~~---~~~ 79 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECN-SVAATKAGEILFS-YSKGAKMITRDGRELWNIAAPAG---CEM 79 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCC-EEEECTTSCEEEE-CBSEEEEECTTSCEEEEEECCTT---CEE
T ss_pred CcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCc-CeEECCCCCEEEe-CCCCEEEECCCCCEEEEEcCCCC---ccc
Confidence 34455555889999999 78765443333 2578 8999999999994 467899999877 3322222111 245
Q ss_pred cceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEe--cC----CCCccceEEccCCCEEEEEe
Q 017520 164 NDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA--DG----FYFANGVALSRDEDYVVVCE 237 (370)
Q Consensus 164 ~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~--~~----~~~p~gi~~~~dg~~l~v~~ 237 (370)
+.+.+.++|++++++.. ..++++.+|++++.+..+. .. ...+.+++.+++|+ ++++.
T Consensus 80 ~~~~~~~dG~~lv~~~~----------------~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~-~lv~~ 142 (276)
T 3no2_A 80 QTARILPDGNALVAWCG----------------HPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGN-YLVPL 142 (276)
T ss_dssp EEEEECTTSCEEEEEES----------------TTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSC-EEEEE
T ss_pred cccEECCCCCEEEEecC----------------CCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCC-EEEEe
Confidence 67788899999999752 1468899998755444332 11 23467788999999 55555
Q ss_pred CC-c-EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCCEEEEEecCchhHHHhhhcchhHHHHHHhCCccccccccCC
Q 017520 238 SW-K-CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLG 315 (370)
Q Consensus 238 ~~-~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (370)
.. + |..||.+|.. ...+ ..++.|.......+|+++++...+
T Consensus 143 ~~~~~v~~~d~~G~~---~w~~--~~~~~~~~~~~~~~g~~~v~~~~~-------------------------------- 185 (276)
T 3no2_A 143 FATSEVREIAPNGQL---LNSV--KLSGTPFSSAFLDNGDCLVACGDA-------------------------------- 185 (276)
T ss_dssp TTTTEEEEECTTSCE---EEEE--ECSSCCCEEEECTTSCEEEECBTT--------------------------------
T ss_pred cCCCEEEEECCCCCE---EEEE--ECCCCccceeEcCCCCEEEEeCCC--------------------------------
Confidence 44 4 9999977531 2222 223457788899999999987654
Q ss_pred CceEEEEECCC-CcEEEEEeCCC--CCccccceeEEE-ECCEEEEEeCCC
Q 017520 316 GGAHLIHVAED-GTIIRNLVDPT--GQLMSFVTSGLQ-VDNHLYVISLTS 361 (370)
Q Consensus 316 ~~g~v~~~~~~-g~~~~~~~~~~--g~~~~~~t~~~~-~~g~L~~gs~~~ 361 (370)
+.|+.+|++ |++++.+...+ +..+..++.+.. .+|++|+++..+
T Consensus 186 --~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g 233 (276)
T 3no2_A 186 --HCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQG 233 (276)
T ss_dssp --SEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEECT
T ss_pred --CeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEeccC
Confidence 469999998 99999997532 323444555554 469999999754
No 74
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.50 E-value=2.2e-11 Score=109.39 Aligned_cols=228 Identities=11% Similarity=0.078 Sum_probs=148.0
Q ss_pred eEecCCCcCCCcceEEcCCCcEEEEecCCeEEEEe-CCeEEEEEecC--CCceeceEEcCCCcEEEEeCC--CceEEEcC
Q 017520 71 IKVGEGSVNHPEDASMDKNGVIYTATRDGWIKRLQ-DGTWVNWKFID--SQTLVGLTSTKEGHLIICDNA--NGLHKVSE 145 (370)
Q Consensus 71 ~~~~~~~~~~P~~i~~d~~G~l~v~~~~g~I~~~~-~g~~~~~~~~~--~~p~~gl~~d~~G~L~v~~~~--~gi~~~~~ 145 (370)
+++..+....+.+++++++|++++ +.+++|+.++ +|+...-.... .... +..+.++|++++++.. ..++.+++
T Consensus 29 w~~~~~~~~~~~~~~~~pdG~ilv-s~~~~V~~~d~~G~~~W~~~~~~~~~~~-~~~~~~dG~~lv~~~~~~~~v~~vd~ 106 (276)
T 3no2_A 29 WEYPLEKGWECNSVAATKAGEILF-SYSKGAKMITRDGRELWNIAAPAGCEMQ-TARILPDGNALVAWCGHPSTILEVNM 106 (276)
T ss_dssp EEEECCTTCCCCEEEECTTSCEEE-ECBSEEEEECTTSCEEEEEECCTTCEEE-EEEECTTSCEEEEEESTTEEEEEECT
T ss_pred EEeCCCccCCCcCeEECCCCCEEE-eCCCCEEEECCCCCEEEEEcCCCCcccc-ccEECCCCCEEEEecCCCCEEEEEeC
Confidence 344433224689999999999999 4567899999 88754433322 2455 7788899999998764 35888888
Q ss_pred CC--eEEEEeecC-CcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecCCCCcc
Q 017520 146 DG--VENFLSYVN-GSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFAN 222 (370)
Q Consensus 146 ~g--~~~~~~~~~-g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~p~ 222 (370)
+| +..+..... ..++..++.++++++|++++++. .+++|+.+|++.+.+..+ .....|.
T Consensus 107 ~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~-----------------~~~~v~~~d~~G~~~w~~-~~~~~~~ 168 (276)
T 3no2_A 107 KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLF-----------------ATSEVREIAPNGQLLNSV-KLSGTPF 168 (276)
T ss_dssp TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEET-----------------TTTEEEEECTTSCEEEEE-ECSSCCC
T ss_pred CCCEEEEEeccCCCCcccccccCceECCCCCEEEEec-----------------CCCEEEEECCCCCEEEEE-ECCCCcc
Confidence 78 333321111 12234567789999999999975 357899999984433333 3334678
Q ss_pred ceEEccCCCEEEEEeCCc--EEEEEeCCCCCCceeeecc-CCC----CCCCceeECCCCCEEEEEecCchhHHHhhhcch
Q 017520 223 GVALSRDEDYVVVCESWK--CRKYWLKGERKGKLETFAE-NLP----GAPDNINLAPDGTFWIAIIKLDARRMKILNSSK 295 (370)
Q Consensus 223 gi~~~~dg~~l~v~~~~~--l~~~~~~~~~~~~~~~~~~-~~~----g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~ 295 (370)
++...++|+ ++++...+ |..+++++.+. .-.+.. ..+ ..|.++.+.++|++|++..+++...-
T Consensus 169 ~~~~~~~g~-~~v~~~~~~~v~~~d~~tG~~--~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g~~~~~------- 238 (276)
T 3no2_A 169 SSAFLDNGD-CLVACGDAHCFVQLNLESNRI--VRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGHDREA------- 238 (276)
T ss_dssp EEEECTTSC-EEEECBTTSEEEEECTTTCCE--EEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEECTTCTTG-------
T ss_pred ceeEcCCCC-EEEEeCCCCeEEEEeCcCCcE--EEEecCCCCCCccccccccceEcCCCCEEEEeccCccccc-------
Confidence 888999998 55555444 99999773221 112211 111 23678889999999999976521000
Q ss_pred hHHHHHHhCCccccccccCCCceEEEEECCCCcEEEEEeCCCCCccccceeE
Q 017520 296 LIKHVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSG 347 (370)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~g~~~~~~~~~~g~~~~~~t~~ 347 (370)
.....+.+++++++|++++.|.+... +..++++
T Consensus 239 -----------------~~~~~~~~~~~~~~g~~~W~~~~~~~--~~~~~~~ 271 (276)
T 3no2_A 239 -----------------GKGKHPQLVEIDSEGKVVWQLNDKVK--FGMISTI 271 (276)
T ss_dssp -----------------GGSCCCSEEEECTTSBEEEEECCTTT--SCCCCEE
T ss_pred -----------------cccCCceEEEECCCCCEEEEecCccc--ccceeee
Confidence 00023468999999999999977442 3445544
No 75
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.50 E-value=1.7e-12 Score=124.76 Aligned_cols=181 Identities=14% Similarity=0.159 Sum_probs=124.0
Q ss_pred CcCCCcceEE-------cCCCc-EEEEecCC-------eEEEEe---CCeEE-----EEEecCCCceeceEEcC-CCcEE
Q 017520 77 SVNHPEDASM-------DKNGV-IYTATRDG-------WIKRLQ---DGTWV-----NWKFIDSQTLVGLTSTK-EGHLI 132 (370)
Q Consensus 77 ~~~~P~~i~~-------d~~G~-l~v~~~~g-------~I~~~~---~g~~~-----~~~~~~~~p~~gl~~d~-~G~L~ 132 (370)
.+.+|.+|++ |++|+ ||+++..+ .|+.++ +|.+. ........|+ ++++++ +|.||
T Consensus 184 ~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~-giavdp~~g~LY 262 (496)
T 3kya_A 184 PTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAYKQCN-GATIHPINGELY 262 (496)
T ss_dssp SCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEESCCC-CEEECTTTCCEE
T ss_pred ccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccCCCce-EEEEcCCCCeEE
Confidence 4567999999 99887 99999543 388886 35552 1222456789 999998 67899
Q ss_pred EEeCCCc-eEEEc-C-------CC-e------------EEEEeecCCcccccccceEEcCCCc-EEEEeCCCCCCCccce
Q 017520 133 ICDNANG-LHKVS-E-------DG-V------------ENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYC 189 (370)
Q Consensus 133 v~~~~~g-i~~~~-~-------~g-~------------~~~~~~~~g~~~~~~~~l~~d~~G~-l~v~d~~~~~~~~~~~ 189 (370)
+++...+ |++++ . ++ . +.+... .. ...+..|+++++|+ |||+|.
T Consensus 263 vtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~-~~--~~~p~~ia~~p~G~~lYvaD~---------- 329 (496)
T 3kya_A 263 FNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTI-AD--PSWEFQIFIHPTGKYAYFGVI---------- 329 (496)
T ss_dssp EEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEEC-SS--SSCCEEEEECTTSSEEEEEET----------
T ss_pred EEECCCCEEEEEecccccccccCceeecccccccccccceeEec-CC--CCCceEEEEcCCCCEEEEEeC----------
Confidence 9998855 99999 5 45 4 122211 11 23578999999998 899997
Q ss_pred ecccccCCCceEEEEeCC--CCeE---EEEec---------------CCCCcc-ceEEc-------cCCCEEEEEeCCc-
Q 017520 190 LDILEGKPHGQLLKYDPS--SNIT---TLVAD---------------GFYFAN-GVALS-------RDEDYVVVCESWK- 240 (370)
Q Consensus 190 ~~~~~~~~~g~l~~~d~~--t~~~---~~~~~---------------~~~~p~-gi~~~-------~dg~~l~v~~~~~- 240 (370)
.+.+|++++.+ ++.+ ..++. .+..|. |++++ .+|+ ||++++.+
T Consensus 330 -------~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~-lyVaD~~N~ 401 (496)
T 3kya_A 330 -------NNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYD-FYFVDRLNF 401 (496)
T ss_dssp -------TTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEE-EEEEEGGGT
T ss_pred -------CCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCe-EEEEECCCC
Confidence 35688886543 3332 22321 245688 78887 4555 99999987
Q ss_pred -EEEEEeCCCCCCceeeecc-----------------C------CCCCCCceeECCC-CCEEEEEecC
Q 017520 241 -CRKYWLKGERKGKLETFAE-----------------N------LPGAPDNINLAPD-GTFWIAIIKL 283 (370)
Q Consensus 241 -l~~~~~~~~~~~~~~~~~~-----------------~------~~g~p~~i~~d~~-G~lwv~~~~~ 283 (370)
|++++.+|. ...+.. . .-..|.+|++|++ |+|||+....
T Consensus 402 rIr~i~~~G~----v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N 465 (496)
T 3kya_A 402 CVRKVTPEGI----VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVG 465 (496)
T ss_dssp EEEEECTTCB----EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTT
T ss_pred EEEEEeCCCC----EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCC
Confidence 999986542 222211 0 0124888999996 9999999765
No 76
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.46 E-value=1.8e-12 Score=120.19 Aligned_cols=184 Identities=13% Similarity=0.164 Sum_probs=126.3
Q ss_pred CCcCCCcceEEcCCCcEEEEec------CCeEEEEe--CCeE-EEEEec------CCCceeceEEcC-CCcEEEEeC---
Q 017520 76 GSVNHPEDASMDKNGVIYTATR------DGWIKRLQ--DGTW-VNWKFI------DSQTLVGLTSTK-EGHLIICDN--- 136 (370)
Q Consensus 76 ~~~~~P~~i~~d~~G~l~v~~~------~g~I~~~~--~g~~-~~~~~~------~~~p~~gl~~d~-~G~L~v~~~--- 136 (370)
+.+..|.+|++|++|+||+.+. .++|++++ +|++ +.+... ...+. ++++++ +|.+|+++.
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~-~v~vd~~~g~~yvtd~~~~ 142 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVN-DLAVDLIHNFVYISDPAPD 142 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCC-EEEEETTTTEEEEEECCSG
T ss_pred cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccc-eEEEecCCCEEEEEcCccC
Confidence 3467899999999999999983 47899999 5774 444321 13467 999996 468999986
Q ss_pred C-CceEEEc-CCC-eEEEEee------------cCCccc-------------ccccceEEcCCC-cEEEEeCCCCCCCcc
Q 017520 137 A-NGLHKVS-EDG-VENFLSY------------VNGSKL-------------RFANDVVEASDG-SLYFTVSSSKYLPHE 187 (370)
Q Consensus 137 ~-~gi~~~~-~~g-~~~~~~~------------~~g~~~-------------~~~~~l~~d~~G-~l~v~d~~~~~~~~~ 187 (370)
. .+|+.++ .+| ...+... ..|..+ ..+++|++++|| .||+++..
T Consensus 143 ~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~------- 215 (343)
T 2qe8_A 143 DKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMH------- 215 (343)
T ss_dssp GGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESS-------
T ss_pred CCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCC-------
Confidence 3 6788898 556 3332211 011111 246899999999 59999763
Q ss_pred ceecccccCCCceEEEEeCCC---C---------eEEEEecCCCCccceEEccCCCEEEEEeCCc--EEEEEe-CCCCCC
Q 017520 188 YCLDILEGKPHGQLLKYDPSS---N---------ITTLVADGFYFANGVALSRDEDYVVVCESWK--CRKYWL-KGERKG 252 (370)
Q Consensus 188 ~~~~~~~~~~~g~l~~~d~~t---~---------~~~~~~~~~~~p~gi~~~~dg~~l~v~~~~~--l~~~~~-~~~~~~ 252 (370)
..+|++++.+. + .+... .....|.|+++|++|+ +|+++... |.+|+. ++
T Consensus 216 ----------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-g~~g~pdgia~d~~G~-l~va~~~~~~V~~~d~~~G---- 279 (343)
T 2qe8_A 216 ----------STSMYRIKSADLSNLQLTDAELGSKIERY-SEKPICDGISIDKDHN-IYVGDLAHSAIGVITSADR---- 279 (343)
T ss_dssp ----------CSEEEEEEHHHHTCTTCCHHHHHTTCEEE-EECCSCSCEEECTTCC-EEEEEGGGTEEEEEETTTT----
T ss_pred ----------CCeEEEEEHHHhcCCCCChhhhhcceEec-ccCCCCceEEECCCCC-EEEEccCCCeEEEEECCCC----
Confidence 34788887421 1 01111 2234799999999997 99999866 999997 43
Q ss_pred ceeeeccC-CCCCCCceeECCCCCEEEEEecC
Q 017520 253 KLETFAEN-LPGAPDNINLAPDGTFWIAIIKL 283 (370)
Q Consensus 253 ~~~~~~~~-~~g~p~~i~~d~~G~lwv~~~~~ 283 (370)
+...+... ....|++++++++|++|+++...
T Consensus 280 ~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~ 311 (343)
T 2qe8_A 280 AYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQL 311 (343)
T ss_dssp EEEEEEECGGGSCEEEEEECTTSCEEEEECCG
T ss_pred CEEEEEECCceecCCeeEECCCCcEEEEeCcc
Confidence 33333321 12368999999999999998754
No 77
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.45 E-value=1.5e-11 Score=114.49 Aligned_cols=160 Identities=12% Similarity=0.117 Sum_probs=107.2
Q ss_pred eEEEEEecCCCceeceEEcCCCcEEEEeCCCceEEEcCCC-eEEEEeec-CCcccccccceEEcCC----CcEEEEeCCC
Q 017520 108 TWVNWKFIDSQTLVGLTSTKEGHLIICDNANGLHKVSEDG-VENFLSYV-NGSKLRFANDVVEASD----GSLYFTVSSS 181 (370)
Q Consensus 108 ~~~~~~~~~~~p~~gl~~d~~G~L~v~~~~~gi~~~~~~g-~~~~~~~~-~g~~~~~~~~l~~d~~----G~l~v~d~~~ 181 (370)
+++.+......|. +|+++++|+|||++..+.|++++ +| .+.+.... .......+++|+++++ |.||+++...
T Consensus 22 ~~~~va~~l~~P~-~ia~~pdG~l~V~e~~g~I~~i~-~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~ 99 (352)
T 2ism_A 22 RVEEVVGGLEVPW-ALAFLPDGGMLIAERPGRIRLFR-EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVA 99 (352)
T ss_dssp CEEEEECCCSCEE-EEEECTTSCEEEEETTTEEEEEE-TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEC
T ss_pred EEEEEECCCCCce-EEEEcCCCeEEEEeCCCeEEEEE-CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecC
Confidence 4556666667899 99999999999999877788888 66 44443221 1112457899999998 7999997520
Q ss_pred CCCCccceecccccCCCceEEEEeCCCCe---EEEEec-------CCCCccceEEccCCCEEEEEeC-------------
Q 017520 182 KYLPHEYCLDILEGKPHGQLLKYDPSSNI---TTLVAD-------GFYFANGVALSRDEDYVVVCES------------- 238 (370)
Q Consensus 182 ~~~~~~~~~~~~~~~~~g~l~~~d~~t~~---~~~~~~-------~~~~p~gi~~~~dg~~l~v~~~------------- 238 (370)
. .....+|++++.+.+. .+.+.. ....++++++++||. ||++..
T Consensus 100 ~------------~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~-Lyv~~G~~~~~~~~~d~~~ 166 (352)
T 2ism_A 100 E------------GGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGM-LYVTTGEVYERELAQDLAS 166 (352)
T ss_dssp T------------TSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSC-EEEECCCTTCGGGGGCTTC
T ss_pred C------------CCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCC-EEEEECCCCCCccccCCCC
Confidence 0 0012578999876442 222222 234678999999996 999862
Q ss_pred -Cc-EEEEEeCCCCC----------CceeeeccCCCCCCCceeECC-CCCEEEEEecC
Q 017520 239 -WK-CRKYWLKGERK----------GKLETFAENLPGAPDNINLAP-DGTFWIAIIKL 283 (370)
Q Consensus 239 -~~-l~~~~~~~~~~----------~~~~~~~~~~~g~p~~i~~d~-~G~lwv~~~~~ 283 (370)
.+ |+|+++++... ...+.+...+ ..|.++++|+ +|+||++..+.
T Consensus 167 ~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~-rnp~g~a~d~~~g~l~v~d~g~ 223 (352)
T 2ism_A 167 LGGKILRLTPEGEPAPGNPFLGRRGARPEVYSLGH-RNPQGLAWHPKTGELFSSEHGP 223 (352)
T ss_dssp SSSEEEEECTTSSBCTTCTTTTCTTSCTTEEEECC-SEECCCEECTTTCCEEEEEECC
T ss_pred CceEEEEEcCCCCCCCCCcccCCCCCCccEEEEcC-CCcccEEEECCCCCEEEEEcCC
Confidence 13 99999876210 1222332222 2489999999 88999999765
No 78
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.45 E-value=5.1e-11 Score=109.88 Aligned_cols=184 Identities=15% Similarity=0.170 Sum_probs=118.8
Q ss_pred CCCcceEEcCCCc-EEEEe-cCCeEEEEe---CCeEEEEEec---C---------CCceeceEEcCCCcEEEEeCCC-ce
Q 017520 79 NHPEDASMDKNGV-IYTAT-RDGWIKRLQ---DGTWVNWKFI---D---------SQTLVGLTSTKEGHLIICDNAN-GL 140 (370)
Q Consensus 79 ~~P~~i~~d~~G~-l~v~~-~~g~I~~~~---~g~~~~~~~~---~---------~~p~~gl~~d~~G~L~v~~~~~-gi 140 (370)
..|.+++++++|+ ||+++ .++.|..++ +|+.+..... . ..+. +++++++|++|+++... .+
T Consensus 86 ~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~-~~~~spdg~l~v~~~~~~~v 164 (347)
T 3hfq_A 86 TPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIH-YTDLTPDNRLAVIDLGSDKV 164 (347)
T ss_dssp CCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEE-EEEECTTSCEEEEETTTTEE
T ss_pred CCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCce-EEEECCCCcEEEEeCCCCEE
Confidence 5799999999996 88887 678888887 4554433221 1 1366 79999999999988764 46
Q ss_pred EEEc-C-CC-eEEEEeecCCcccccccceEEcCCCc-EEEEeCCCCCCCccceecccccCCCceEEE--EeCCCCeEEEE
Q 017520 141 HKVS-E-DG-VENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLK--YDPSSNITTLV 214 (370)
Q Consensus 141 ~~~~-~-~g-~~~~~~~~~g~~~~~~~~l~~d~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~--~d~~t~~~~~~ 214 (370)
..++ . +| +....... ......++.+++++||+ +|+++.. .+.+.. ++..+++.+..
T Consensus 165 ~~~~~~~~g~~~~~~~~~-~~~g~~p~~~~~spdg~~l~v~~~~-----------------~~~v~v~~~~~~~g~~~~~ 226 (347)
T 3hfq_A 165 YVYNVSDAGQLSEQSVLT-MEAGFGPRHLVFSPDGQYAFLAGEL-----------------SSQIASLKYDTQTGAFTQL 226 (347)
T ss_dssp EEEEECTTSCEEEEEEEE-CCTTCCEEEEEECTTSSEEEEEETT-----------------TTEEEEEEEETTTTEEEEE
T ss_pred EEEEECCCCcEEEeeeEE-cCCCCCCceEEECCCCCEEEEEeCC-----------------CCEEEEEEecCCCCceEEe
Confidence 6666 3 56 44332211 11123677899999997 8887652 244444 44445655432
Q ss_pred ec--C-------CCCccceEEccCCCEEEEEeCCc--EEEEEeCCC-CCCceeeeccCCCCCCCceeECCCCC-EEEEEe
Q 017520 215 AD--G-------FYFANGVALSRDEDYVVVCESWK--CRKYWLKGE-RKGKLETFAENLPGAPDNINLAPDGT-FWIAII 281 (370)
Q Consensus 215 ~~--~-------~~~p~gi~~~~dg~~l~v~~~~~--l~~~~~~~~-~~~~~~~~~~~~~g~p~~i~~d~~G~-lwv~~~ 281 (370)
.. . ...+.++++++||+.+|++.... |.+|+++.. .......+ ......|.++++++||+ +|++..
T Consensus 227 ~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~-~~~~~~~~~~~~spdg~~l~v~~~ 305 (347)
T 3hfq_A 227 GIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQI-STEGDFPRDFDLDPTEAFVVVVNQ 305 (347)
T ss_dssp EEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEE-ECSSSCCCEEEECTTSSEEEEEET
T ss_pred eeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEE-ecCCCCcCeEEECCCCCEEEEEEc
Confidence 21 1 13467799999999999988744 888888632 11111111 12233589999999997 777765
Q ss_pred c
Q 017520 282 K 282 (370)
Q Consensus 282 ~ 282 (370)
.
T Consensus 306 ~ 306 (347)
T 3hfq_A 306 N 306 (347)
T ss_dssp T
T ss_pred C
Confidence 4
No 79
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=99.41 E-value=5.5e-12 Score=121.21 Aligned_cols=169 Identities=15% Similarity=0.170 Sum_probs=116.9
Q ss_pred CceEecCCCcCCCcceEEcCCCcEEEEecCC-eEEEEe--CCeEEEEEe---------cCCCceeceEEcC----CCcEE
Q 017520 69 DFIKVGEGSVNHPEDASMDKNGVIYTATRDG-WIKRLQ--DGTWVNWKF---------IDSQTLVGLTSTK----EGHLI 132 (370)
Q Consensus 69 ~~~~~~~~~~~~P~~i~~d~~G~l~v~~~~g-~I~~~~--~g~~~~~~~---------~~~~p~~gl~~d~----~G~L~ 132 (370)
.+++++.+ +..|.+|+++++|+|||++..| +|++++ +|+.+.+.. ..+.++ ||++++ +|.||
T Consensus 18 ~~~~~a~~-l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gll-gia~~Pdf~~~g~lY 95 (454)
T 1cru_A 18 DKKVILSN-LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLL-GFAFHPDFKNNPYIY 95 (454)
T ss_dssp CEEEEECC-CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEE-EEEECTTTTTSCEEE
T ss_pred EEEEEECC-CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCcee-EEEECCCcCcCCEEE
Confidence 44566665 7899999999999999999765 799998 576655432 123467 999998 68899
Q ss_pred EEeCC-------------CceEEEc-C--CC-e---EEEEeecCCcccccccceEEcCCCcEEEEeCCCCCCC-cccee-
Q 017520 133 ICDNA-------------NGLHKVS-E--DG-V---ENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLP-HEYCL- 190 (370)
Q Consensus 133 v~~~~-------------~gi~~~~-~--~g-~---~~~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~-~~~~~- 190 (370)
++... ..|++++ . ++ + +.+....+....+..+.|++++||+|||+........ ...+.
T Consensus 96 v~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd~~~~~~~~~~~~ 175 (454)
T 1cru_A 96 ISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGDQGRNQLAYLFLP 175 (454)
T ss_dssp EEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECCTTTTSGGGTTSC
T ss_pred EEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECCCCCCCccccccc
Confidence 98742 3688887 2 22 2 3344333333456789999999999999965311100 00000
Q ss_pred -------------cccccCCCceEEEEeCCCC-----------eEEEEecCCCCccceEEccCCCEEEEEeCCc
Q 017520 191 -------------DILEGKPHGQLLKYDPSSN-----------ITTLVADGFYFANGVALSRDEDYVVVCESWK 240 (370)
Q Consensus 191 -------------~~~~~~~~g~l~~~d~~t~-----------~~~~~~~~~~~p~gi~~~~dg~~l~v~~~~~ 240 (370)
.-......|.|+|+++++. ..++++.++.+|.|++++++|+ ||+++.+.
T Consensus 176 ~~~~~~p~~~~~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei~a~G~RNp~gla~dp~G~-L~~~d~g~ 248 (454)
T 1cru_A 176 NQAQHTPTQQELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYTLGHRNPQGLAFTPNGK-LLQSEQGP 248 (454)
T ss_dssp CCTTCCCCHHHHHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECSEEEBCCSEEEEEEECTTSC-EEEEEECS
T ss_pred cccccccccccccccCCCCCCeeEEEEeCCCCCCCCCCCCCCCcceEEEECCCCcceEEECCCCC-EEEEecCC
Confidence 0000123689999999865 4577888999999999999877 99999753
No 80
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.41 E-value=2.9e-10 Score=106.00 Aligned_cols=242 Identities=14% Similarity=0.080 Sum_probs=142.0
Q ss_pred cCCCcceEEcCCCc-EEEEecCCeEEEEe---CCeEEEEEe--cCCCceeceEEcCCCc-EEE--Ee-------------
Q 017520 78 VNHPEDASMDKNGV-IYTATRDGWIKRLQ---DGTWVNWKF--IDSQTLVGLTSTKEGH-LII--CD------------- 135 (370)
Q Consensus 78 ~~~P~~i~~d~~G~-l~v~~~~g~I~~~~---~g~~~~~~~--~~~~p~~gl~~d~~G~-L~v--~~------------- 135 (370)
...|..++++++|+ ||+++.+ .|..|+ +|+...... ..+.|. ++++++||+ ||+ ++
T Consensus 39 ~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~-~~~~spdg~~l~~~~~~~~~~~~~~~~~~~ 116 (365)
T 1jof_A 39 DEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPR-ANDADTNTRAIFLLAAKQPPYAVYANPFYK 116 (365)
T ss_dssp TCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGG-GGCTTSCCEEEEEEECSSTTCCEEEEEESS
T ss_pred CCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCc-cEEECCCCCEEEEEEecCCcceeccceeec
Confidence 45799999999997 8888766 788887 576544322 224588 899999998 343 33
Q ss_pred CCCceEEEc--CCC-eEEEEeecCCcccccccceEEcCCCc-EEEEeCCCCCCCccceecccccCCCceEEEEeCC-CCe
Q 017520 136 NANGLHKVS--EDG-VENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPS-SNI 210 (370)
Q Consensus 136 ~~~gi~~~~--~~g-~~~~~~~~~g~~~~~~~~l~~d~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~-t~~ 210 (370)
..+.+..++ .+| ...............++.++++|||+ +|+++. ..+.|+.||.+ +++
T Consensus 117 ~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~-----------------~~~~v~~~~~~~~g~ 179 (365)
T 1jof_A 117 FAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADL-----------------TANKLWTHRKLASGE 179 (365)
T ss_dssp SCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEET-----------------TTTEEEEEEECTTSC
T ss_pred CCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcC-----------------CCCEEEEEEECCCCC
Confidence 222344444 456 33222211101124688999999996 777764 23578888876 666
Q ss_pred EEEEe--c---CCCCccceEEccCCCEEEEEeCC-c-EEEEEeCCCCCCce----eeeccCCC----C---------CCC
Q 017520 211 TTLVA--D---GFYFANGVALSRDEDYVVVCESW-K-CRKYWLKGERKGKL----ETFAENLP----G---------APD 266 (370)
Q Consensus 211 ~~~~~--~---~~~~p~gi~~~~dg~~l~v~~~~-~-l~~~~~~~~~~~~~----~~~~~~~~----g---------~p~ 266 (370)
.+.+. . ....|.++++++||+.+|++... + |.+|+++.. .+.. ..+. ..+ + .+.
T Consensus 180 ~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~-~g~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~ 257 (365)
T 1jof_A 180 VELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPA-THMPVYTHHSFP-LIPPGIPDRDPETGKGLYRA 257 (365)
T ss_dssp EEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTT-TCCEEEEEEEEE-SSCTTCCCBCTTTSSBSEEE
T ss_pred EEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCC-CCcEEEccceEE-cCCCCcCCcccccccccccc
Confidence 54321 1 14568899999999999998864 3 777766421 1121 1111 111 1 366
Q ss_pred cee-ECCCCC-EEEEEecCchhHHHhhhcchhHHHHHHhCCccccccccCCCceEEEEECCCCcEEEE---EeCCCCCcc
Q 017520 267 NIN-LAPDGT-FWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRN---LVDPTGQLM 341 (370)
Q Consensus 267 ~i~-~d~~G~-lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~g~~~~~---~~~~~g~~~ 341 (370)
+++ +++||+ +|++....... ....-.++.++.+|++... ....... .
T Consensus 258 ~i~~~spdG~~l~v~~~~~~~~---------------------------~~~~i~v~~~~~~g~~~~~~~~~~~~~~~-~ 309 (365)
T 1jof_A 258 DVCALTFSGKYMFASSRANKFE---------------------------LQGYIAGFKLRDCGSIEKQLFLSPTPTSG-G 309 (365)
T ss_dssp EEEEECTTSSEEEEEEEESSTT---------------------------SCCEEEEEEECTTSCEEEEEEEEECSSCC-T
T ss_pred cEEEECCCCCEEEEECCCCCCC---------------------------CCCeEEEEEECCCCCEEEeeeeeecCCCC-c
Confidence 789 999996 67776543100 0001234555556776542 2221111 1
Q ss_pred ccceeEEE---ECCEEEEEeCCCCeEEEEeC
Q 017520 342 SFVTSGLQ---VDNHLYVISLTSNFIGKVQL 369 (370)
Q Consensus 342 ~~~t~~~~---~~g~L~~gs~~~~~i~~~~~ 369 (370)
..+ .+-. +++.||+++..++.|.++++
T Consensus 310 ~~~-a~sp~~~dg~~l~v~~~~~~~v~v~~~ 339 (365)
T 1jof_A 310 HSN-AVSPCPWSDEWMAITDDQEGWLEIYRW 339 (365)
T ss_dssp TCC-CEEECTTCTTEEEEECSSSCEEEEEEE
T ss_pred ccc-eecCCCcCCCEEEEEEcCCCeEEEEEE
Confidence 111 1223 35789999888888887764
No 81
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.40 E-value=7e-10 Score=103.66 Aligned_cols=227 Identities=15% Similarity=0.167 Sum_probs=154.1
Q ss_pred CCCcceEEcCCCc-EEEEe-cCCeEEEEe--CCeEEEEEecCCCceeceEEcCCCc-EEEEeCC-CceEEEc-CCC-eEE
Q 017520 79 NHPEDASMDKNGV-IYTAT-RDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGH-LIICDNA-NGLHKVS-EDG-VEN 150 (370)
Q Consensus 79 ~~P~~i~~d~~G~-l~v~~-~~g~I~~~~--~g~~~~~~~~~~~p~~gl~~d~~G~-L~v~~~~-~gi~~~~-~~g-~~~ 150 (370)
..|.+++++++|. ||++. .++.|..++ +++..........+. +++++++|+ ||++... +.|..++ .++ ...
T Consensus 32 ~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~-~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~ 110 (391)
T 1l0q_A 32 SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQ-GVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAG 110 (391)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEE-EEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCCCcc-ceEECCCCCEEEEEECCCCEEEEEECCCCeEEE
Confidence 3688999999986 66655 789999999 677655555555788 999999997 7777655 5677788 556 322
Q ss_pred EEeecCCcccccccceEEcCCCc-EEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecCCCCccceEEccC
Q 017520 151 FLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRD 229 (370)
Q Consensus 151 ~~~~~~g~~~~~~~~l~~d~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~p~gi~~~~d 229 (370)
.... + ..+..++++++|+ +|++.. ..+.|+.+|..+++..........+..++++++
T Consensus 111 ~~~~--~---~~~~~~~~s~dg~~l~~~~~-----------------~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~d 168 (391)
T 1l0q_A 111 TVKT--G---KSPLGLALSPDGKKLYVTNN-----------------GDKTVSVINTVTKAVINTVSVGRSPKGIAVTPD 168 (391)
T ss_dssp EEEC--S---SSEEEEEECTTSSEEEEEET-----------------TTTEEEEEETTTTEEEEEEECCSSEEEEEECTT
T ss_pred EEeC--C---CCcceEEECCCCCEEEEEeC-----------------CCCEEEEEECCCCcEEEEEecCCCcceEEECCC
Confidence 2221 1 3568899999996 777754 357899999988877665555567889999999
Q ss_pred CCEEEEEeCCc--EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCC-EEEEEecCchhHHHhhhcchhHHHHHHhCCc
Q 017520 230 EDYVVVCESWK--CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGT-FWIAIIKLDARRMKILNSSKLIKHVLAAYPK 306 (370)
Q Consensus 230 g~~l~v~~~~~--l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~-lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (370)
++.+|++.... |..||+...+ ..... .....+..++++++|+ +|++....
T Consensus 169 g~~l~~~~~~~~~v~~~d~~~~~---~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~----------------------- 221 (391)
T 1l0q_A 169 GTKVYVANFDSMSISVIDTVTNS---VIDTV-KVEAAPSGIAVNPEGTKAYVTNVDK----------------------- 221 (391)
T ss_dssp SSEEEEEETTTTEEEEEETTTTE---EEEEE-ECSSEEEEEEECTTSSEEEEEEECS-----------------------
T ss_pred CCEEEEEeCCCCEEEEEECCCCe---EEEEE-ecCCCccceEECCCCCEEEEEecCc-----------------------
Confidence 99888886654 9999976532 21111 1233467789999996 66665311
Q ss_pred cccccccCCCceEEEEECC-CCcEEEEEeCCCCCccccceeEEEE-C-CEEEEEeCCCCeEEEEeC
Q 017520 307 LFSQFITLGGGAHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQV-D-NHLYVISLTSNFIGKVQL 369 (370)
Q Consensus 307 ~~~~~~~~~~~g~v~~~~~-~g~~~~~~~~~~g~~~~~~t~~~~~-~-g~L~~gs~~~~~i~~~~~ 369 (370)
..+.+..+|. .++.+..+.... .+..+... + ..||+++-..+.|.++++
T Consensus 222 ---------~~~~v~~~d~~~~~~~~~~~~~~-----~~~~~~~s~dg~~l~~s~~~d~~v~v~d~ 273 (391)
T 1l0q_A 222 ---------YFNTVSMIDTGTNKITARIPVGP-----DPAGIAVTPDGKKVYVALSFXNTVSVIDT 273 (391)
T ss_dssp ---------SCCEEEEEETTTTEEEEEEECCS-----SEEEEEECTTSSEEEEEETTTTEEEEEET
T ss_pred ---------CCCcEEEEECCCCeEEEEEecCC-----CccEEEEccCCCEEEEEcCCCCEEEEEEC
Confidence 0135777775 466666665432 23344333 3 468788777777777765
No 82
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.40 E-value=2.8e-10 Score=103.88 Aligned_cols=222 Identities=13% Similarity=0.091 Sum_probs=144.6
Q ss_pred CCCcEEEEe-cCCeEEEEe--CCeEEEEEecCCCceeceEEcCCCc-EEEEeCC-CceEEEc-CCC-e-EEEEeecCCcc
Q 017520 88 KNGVIYTAT-RDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGH-LIICDNA-NGLHKVS-EDG-V-ENFLSYVNGSK 159 (370)
Q Consensus 88 ~~G~l~v~~-~~g~I~~~~--~g~~~~~~~~~~~p~~gl~~d~~G~-L~v~~~~-~gi~~~~-~~g-~-~~~~~~~~g~~ 159 (370)
..+.+|++. .++.|..++ +++..........+. +++++++|+ ||+++.. ..|+.++ .++ . ...... +
T Consensus 8 ~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~--~-- 82 (331)
T 3u4y_A 8 TSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQE--G-- 82 (331)
T ss_dssp CCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEE--C--
T ss_pred CCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEeccc--C--
Confidence 456788887 678999999 677655444445566 899999997 8888764 5688888 556 4 332221 1
Q ss_pred cccccc-eEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecCCCCccceEEccCCCEEEEEeC
Q 017520 160 LRFAND-VVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCES 238 (370)
Q Consensus 160 ~~~~~~-l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~p~gi~~~~dg~~l~v~~~ 238 (370)
..+.. ++++++|+..++... ....+.|..+|.++++..........|+++++++||+.+|+++.
T Consensus 83 -~~~~~~~~~s~dg~~l~~~~~--------------~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~ 147 (331)
T 3u4y_A 83 -QSSMADVDITPDDQFAVTVTG--------------LNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDR 147 (331)
T ss_dssp -SSCCCCEEECTTSSEEEECCC--------------SSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEE
T ss_pred -CCCccceEECCCCCEEEEecC--------------CCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEec
Confidence 24556 999999974444321 00112899999988877655555567899999999998999876
Q ss_pred C--c-EEEEEeCCCCC-Cce-eeeccCCCCCCCceeECCCCC-EEEEEecCchhHHHhhhcchhHHHHHHhCCccccccc
Q 017520 239 W--K-CRKYWLKGERK-GKL-ETFAENLPGAPDNINLAPDGT-FWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFI 312 (370)
Q Consensus 239 ~--~-l~~~~~~~~~~-~~~-~~~~~~~~g~p~~i~~d~~G~-lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (370)
. . |..|+++.... ... .... .....|.+++++++|+ +|++....
T Consensus 148 ~~~~~i~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~spdg~~l~v~~~~~----------------------------- 197 (331)
T 3u4y_A 148 SSANTVRRFKIDADGVLFDTGQEFI-SGGTRPFNITFTPDGNFAFVANLIG----------------------------- 197 (331)
T ss_dssp TTTTEEEEEEECTTCCEEEEEEEEE-CSSSSEEEEEECTTSSEEEEEETTT-----------------------------
T ss_pred CCCceEEEEEECCCCcEeecCCccc-cCCCCccceEECCCCCEEEEEeCCC-----------------------------
Confidence 4 3 88888764311 011 1111 2233578899999997 88887543
Q ss_pred cCCCceEEEEECC-CCcE---EEEEeCCCCCccccceeEEEE-C-CEEEEEeCCCCeEEEEeC
Q 017520 313 TLGGGAHLIHVAE-DGTI---IRNLVDPTGQLMSFVTSGLQV-D-NHLYVISLTSNFIGKVQL 369 (370)
Q Consensus 313 ~~~~~g~v~~~~~-~g~~---~~~~~~~~g~~~~~~t~~~~~-~-g~L~~gs~~~~~i~~~~~ 369 (370)
+.+..+|. .++. +..+.... .+..+... + ..||+++...+.|.++++
T Consensus 198 -----~~v~v~d~~~~~~~~~~~~~~~~~-----~~~~~~~spdg~~l~v~~~~~~~i~~~d~ 250 (331)
T 3u4y_A 198 -----NSIGILETQNPENITLLNAVGTNN-----LPGTIVVSRDGSTVYVLTESTVDVFNFNQ 250 (331)
T ss_dssp -----TEEEEEECSSTTSCEEEEEEECSS-----CCCCEEECTTSSEEEEECSSEEEEEEEET
T ss_pred -----CeEEEEECCCCcccceeeeccCCC-----CCceEEECCCCCEEEEEEcCCCEEEEEEC
Confidence 34666775 4666 55555321 23333333 3 458888777777777764
No 83
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.39 E-value=2.3e-11 Score=111.89 Aligned_cols=175 Identities=12% Similarity=0.112 Sum_probs=122.4
Q ss_pred CCCcceEEcCCCcEEEEecCCeEEEEe--CCeEEEEEecC-----CCceeceEEcCCCcEEEEeCC-------CceEEEc
Q 017520 79 NHPEDASMDKNGVIYTATRDGWIKRLQ--DGTWVNWKFID-----SQTLVGLTSTKEGHLIICDNA-------NGLHKVS 144 (370)
Q Consensus 79 ~~P~~i~~d~~G~l~v~~~~g~I~~~~--~g~~~~~~~~~-----~~p~~gl~~d~~G~L~v~~~~-------~gi~~~~ 144 (370)
..|.+++++++|++|+++.+ +|++++ +|+++.+.... .++. ++++|++|++|+++.. .+|++++
T Consensus 90 ~~v~~i~~~~dg~l~v~~~~-gl~~~d~~~g~~~~~~~~~~~~~~~~~~-~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~ 167 (326)
T 2ghs_A 90 FMGSALAKISDSKQLIASDD-GLFLRDTATGVLTLHAELESDLPGNRSN-DGRMHPSGALWIGTMGRKAETGAGSIYHVA 167 (326)
T ss_dssp SCEEEEEEEETTEEEEEETT-EEEEEETTTCCEEEEECSSTTCTTEEEE-EEEECTTSCEEEEEEETTCCTTCEEEEEEE
T ss_pred CcceEEEEeCCCeEEEEECC-CEEEEECCCCcEEEEeeCCCCCCCCCCC-CEEECCCCCEEEEeCCCcCCCCceEEEEEe
Confidence 36788999999999999854 599999 67776664321 3577 8999999999998742 4799998
Q ss_pred CCC-eEEEEeecCCcccccccceEEcCCCc-EEEEeCCCCCCCccceecccccCCCceEEEEeCC--CC-eE---EEEe-
Q 017520 145 EDG-VENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPS--SN-IT---TLVA- 215 (370)
Q Consensus 145 ~~g-~~~~~~~~~g~~~~~~~~l~~d~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~--t~-~~---~~~~- 215 (370)
+| ++.+... ...++++++++||+ +|+++. ..++|+++|.+ ++ .. +.+.
T Consensus 168 -~g~~~~~~~~-----~~~~~~i~~s~dg~~lyv~~~-----------------~~~~I~~~d~~~~~Gl~~~~~~~~~~ 224 (326)
T 2ghs_A 168 -KGKVTKLFAD-----ISIPNSICFSPDGTTGYFVDT-----------------KVNRLMRVPLDARTGLPTGKAEVFID 224 (326)
T ss_dssp -TTEEEEEEEE-----ESSEEEEEECTTSCEEEEEET-----------------TTCEEEEEEBCTTTCCBSSCCEEEEE
T ss_pred -CCcEEEeeCC-----CcccCCeEEcCCCCEEEEEEC-----------------CCCEEEEEEcccccCCcccCceEEEE
Confidence 77 5544322 23578999999995 899975 24689999864 45 31 2222
Q ss_pred --cCCCCccceEEccCCCEEEEEeCC-c-EEEEEeCCCCCCceeeeccCCCCCCCceeEC-CCC-CEEEEEecC
Q 017520 216 --DGFYFANGVALSRDEDYVVVCESW-K-CRKYWLKGERKGKLETFAENLPGAPDNINLA-PDG-TFWIAIIKL 283 (370)
Q Consensus 216 --~~~~~p~gi~~~~dg~~l~v~~~~-~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d-~~G-~lwv~~~~~ 283 (370)
.....|.+++++++|+ +|++... + |.+|++++. ....+. .....|..++++ +++ .+|+++...
T Consensus 225 ~~~~~~~p~gi~~d~~G~-lwva~~~~~~v~~~d~~g~---~~~~i~-~~~~~~~~~af~g~d~~~L~vt~~~~ 293 (326)
T 2ghs_A 225 STGIKGGMDGSVCDAEGH-IWNARWGEGAVDRYDTDGN---HIARYE-VPGKQTTCPAFIGPDASRLLVTSARE 293 (326)
T ss_dssp CTTSSSEEEEEEECTTSC-EEEEEETTTEEEEECTTCC---EEEEEE-CSCSBEEEEEEESTTSCEEEEEEBCT
T ss_pred CCCCCCCCCeeEECCCCC-EEEEEeCCCEEEEECCCCC---EEEEEE-CCCCCcEEEEEecCCCCEEEEEecCC
Confidence 1234688999999998 8888754 3 999987543 122221 111246778887 665 599998664
No 84
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.38 E-value=2e-10 Score=106.85 Aligned_cols=162 Identities=9% Similarity=0.050 Sum_probs=106.8
Q ss_pred eEEEEEecCCCceeceEEcCCCcEEEEeCCCceEEEcCCCeEEEEee-cCCcccccccceEEcCC----CcEEEEeCC-C
Q 017520 108 TWVNWKFIDSQTLVGLTSTKEGHLIICDNANGLHKVSEDGVENFLSY-VNGSKLRFANDVVEASD----GSLYFTVSS-S 181 (370)
Q Consensus 108 ~~~~~~~~~~~p~~gl~~d~~G~L~v~~~~~gi~~~~~~g~~~~~~~-~~g~~~~~~~~l~~d~~----G~l~v~d~~-~ 181 (370)
+++.+......|. +|+++++|+|||++..+.|++++++|.+.+... ........+.+|+++++ |.||+++.. .
T Consensus 20 ~~~~va~~l~~P~-~ia~~pdG~l~V~e~~g~I~~~d~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~ 98 (354)
T 3a9g_A 20 KISEVASDLEVPW-SIAPLGGGRYLVTERPGRLVLISPSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFA 98 (354)
T ss_dssp EEEEEECSCSCEE-EEEEEETTEEEEEETTTEEEEECSSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEEC
T ss_pred EEEEEeCCCCCCe-EEEEcCCCeEEEEeCCCEEEEEeCCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccC
Confidence 3455665667899 999999999999998778999986664222211 11112356889999997 899999641 0
Q ss_pred CCCCccceecccccCCCceEEEEeCCCC-----eEEEEec-----CCCCccceEEccCCCEEEEEeC-------------
Q 017520 182 KYLPHEYCLDILEGKPHGQLLKYDPSSN-----ITTLVAD-----GFYFANGVALSRDEDYVVVCES------------- 238 (370)
Q Consensus 182 ~~~~~~~~~~~~~~~~~g~l~~~d~~t~-----~~~~~~~-----~~~~p~gi~~~~dg~~l~v~~~------------- 238 (370)
. ......+|+|++.+.+ ..+++.. ....++++++++||. ||++..
T Consensus 99 ~-----------~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~-Lyvt~G~~~~~~~~~d~~~ 166 (354)
T 3a9g_A 99 E-----------GGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGM-LYITTGDAADPRLAQDLSS 166 (354)
T ss_dssp G-----------GGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSC-EEEECCCTTCGGGGTCTTC
T ss_pred C-----------CCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCc-EEEEECCCCCCccccCCCC
Confidence 0 0001257899987644 1233222 245688999999997 999852
Q ss_pred -Cc-EEEEEeCCCCC-C----ceeeeccCCCCCCCceeECC-CCCEEEEEecC
Q 017520 239 -WK-CRKYWLKGERK-G----KLETFAENLPGAPDNINLAP-DGTFWIAIIKL 283 (370)
Q Consensus 239 -~~-l~~~~~~~~~~-~----~~~~~~~~~~g~p~~i~~d~-~G~lwv~~~~~ 283 (370)
.+ |+|++.++... . ..+.+...+ ..|.++++|+ +|++|++..+.
T Consensus 167 ~~G~I~ri~~dG~~p~~npf~~~~i~a~G~-rnp~Gla~d~~~g~l~v~d~g~ 218 (354)
T 3a9g_A 167 LAGKILRVDEEGRPPADNPFPNSPIWSYGH-RNPQGIDWHRASGVMVATEHGP 218 (354)
T ss_dssp CSSEEEEECTTSCCCTTSSSTTCCEEEECC-SCCCEEEECTTTCCEEEEECCS
T ss_pred CCeEEEEEcCCCCCCCCCCCCCCcEEEEcc-CCcceEEEeCCCCCEEEEecCC
Confidence 13 99999876310 0 123333222 2589999999 89999999775
No 85
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.37 E-value=3.5e-10 Score=103.21 Aligned_cols=182 Identities=13% Similarity=0.193 Sum_probs=116.5
Q ss_pred CCCcceEEcCCCc-EEEEecC-CeEEEEe-C---CeEEEEE--ecCCCceeceEEcCCCc-EEEEeCCCc-eEEEc-CCC
Q 017520 79 NHPEDASMDKNGV-IYTATRD-GWIKRLQ-D---GTWVNWK--FIDSQTLVGLTSTKEGH-LIICDNANG-LHKVS-EDG 147 (370)
Q Consensus 79 ~~P~~i~~d~~G~-l~v~~~~-g~I~~~~-~---g~~~~~~--~~~~~p~~gl~~d~~G~-L~v~~~~~g-i~~~~-~~g 147 (370)
..|.+++++++|. ||+++.+ +.|..|+ + ++.+... ...+.|. +++++++|+ ||++....+ |..++ .+|
T Consensus 38 ~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~ 116 (343)
T 1ri6_A 38 GQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLT-HISTDHQGQFVFVGSYNAGNVSVTRLEDG 116 (343)
T ss_dssp SCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCS-EEEECTTSSEEEEEETTTTEEEEEEEETT
T ss_pred CCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCCCCc-EEEEcCCCCEEEEEecCCCeEEEEECCCC
Confidence 4799999999986 8888855 8888877 3 4544332 2234788 999999997 778876544 66666 344
Q ss_pred -eEEEEeecCCcccccccceEEcCCCc-EEEEeCCCCCCCccceecccccCCCceEEEEeCCC-CeEEEE------ecCC
Q 017520 148 -VENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSS-NITTLV------ADGF 218 (370)
Q Consensus 148 -~~~~~~~~~g~~~~~~~~l~~d~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t-~~~~~~------~~~~ 218 (370)
.......... ...++.++++++|+ +|+++. ..+.|..||..+ ++.... ....
T Consensus 117 ~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~-----------------~~~~v~~~d~~~~~~~~~~~~~~~~~~~~ 177 (343)
T 1ri6_A 117 LPVGVVDVVEG--LDGCHSANISPDNRTLWVPAL-----------------KQDRICLFTVSDDGHLVAQDPAEVTTVEG 177 (343)
T ss_dssp EEEEEEEEECC--CTTBCCCEECTTSSEEEEEEG-----------------GGTEEEEEEECTTSCEEEEEEEEEECSTT
T ss_pred ccccccccccC--CCCceEEEECCCCCEEEEecC-----------------CCCEEEEEEecCCCceeeecccccccCCC
Confidence 2222222222 13578899999995 887763 246788888765 544321 1223
Q ss_pred CCccceEEccCCCEEEEEeCCc--EEEEEeCCC--CCCceeeeccCCC------CCCCceeECCCCC-EEEEEe
Q 017520 219 YFANGVALSRDEDYVVVCESWK--CRKYWLKGE--RKGKLETFAENLP------GAPDNINLAPDGT-FWIAII 281 (370)
Q Consensus 219 ~~p~gi~~~~dg~~l~v~~~~~--l~~~~~~~~--~~~~~~~~~~~~~------g~p~~i~~d~~G~-lwv~~~ 281 (370)
..|.++++++|++.+|++.... |..|+++.. +......+. ..+ ..+..++++++|+ +|++..
T Consensus 178 ~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~i~~s~dg~~l~v~~~ 250 (343)
T 1ri6_A 178 AGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLD-MMPENFSDTRWAADIHITPDGRHLYACDR 250 (343)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEE-CSCTTCCSCCCEEEEEECTTSSEEEEEET
T ss_pred CCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeecc-ccCccccccCCccceEECCCCCEEEEEec
Confidence 4678899999999899887543 888887532 111111111 111 1233589999996 666653
No 86
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.35 E-value=1.6e-09 Score=100.44 Aligned_cols=234 Identities=17% Similarity=0.241 Sum_probs=140.1
Q ss_pred cCCCcceEEcCCCc-EEEEecC----CeEEEEe---C-CeEEEEEe---cCCCceeceEEcCCC-cEEEEeCCCc-eEEE
Q 017520 78 VNHPEDASMDKNGV-IYTATRD----GWIKRLQ---D-GTWVNWKF---IDSQTLVGLTSTKEG-HLIICDNANG-LHKV 143 (370)
Q Consensus 78 ~~~P~~i~~d~~G~-l~v~~~~----g~I~~~~---~-g~~~~~~~---~~~~p~~gl~~d~~G-~L~v~~~~~g-i~~~ 143 (370)
...|..++++++|+ ||+++.+ |.|..|+ + |+.+.+.. ....|. .+++ +| .||+++...+ +..+
T Consensus 49 ~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~-~~~~--dg~~l~~~~~~~~~v~~~ 125 (361)
T 3scy_A 49 VANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPC-YLTT--NGKNIVTANYSGGSITVF 125 (361)
T ss_dssp CSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEE-EEEE--CSSEEEEEETTTTEEEEE
T ss_pred CCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcE-EEEE--CCCEEEEEECCCCEEEEE
Confidence 46899999999996 8888754 6776555 3 76655432 345678 8888 45 5888876544 5555
Q ss_pred c--CCC-eEEEEe--ecCC-------cccccccceEEcCCCc-EEEEeCCCCCCCccceecccccCCCceEEEE--eCCC
Q 017520 144 S--EDG-VENFLS--YVNG-------SKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKY--DPSS 208 (370)
Q Consensus 144 ~--~~g-~~~~~~--~~~g-------~~~~~~~~l~~d~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~--d~~t 208 (370)
+ .++ +..+.. ...+ .....++.++++|||+ +|+++. ..+.+..| +..+
T Consensus 126 ~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~-----------------~~~~v~v~~~~~~~ 188 (361)
T 3scy_A 126 PIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDL-----------------GTDQIHKFNINPNA 188 (361)
T ss_dssp EBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEET-----------------TTTEEEEEEECTTC
T ss_pred EeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeC-----------------CCCEEEEEEEcCCC
Confidence 5 344 321111 0111 0123457899999997 888865 23455555 4444
Q ss_pred C----e-E-------EEEecCCCCccceEEccCCCEEEEEeCC-c-EEEEEeCCCCCCceeeeccCCC---CCCCceeEC
Q 017520 209 N----I-T-------TLVADGFYFANGVALSRDEDYVVVCESW-K-CRKYWLKGERKGKLETFAENLP---GAPDNINLA 271 (370)
Q Consensus 209 ~----~-~-------~~~~~~~~~p~gi~~~~dg~~l~v~~~~-~-l~~~~~~~~~~~~~~~~~~~~~---g~p~~i~~d 271 (370)
+ + + .........|.++++++||+.+|++... + |.+|++++.+......+. ..+ ..|..++++
T Consensus 189 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~-~~~~~~~~~~~i~~s 267 (361)
T 3scy_A 189 NADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVA-ADTVNAQGSGDIHLS 267 (361)
T ss_dssp CTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEE-SCSSCCCCEEEEEEC
T ss_pred CcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEe-cCCCCCCCcccEEEC
Confidence 3 2 2 1222344568899999999999999854 4 888888643221122221 111 235689999
Q ss_pred CCCC-EEEEEec-CchhHHHhhhcchhHHHHHHhCCccccccccCCCceEEEEECC-CCcE--EEEEeCCCCCcccccee
Q 017520 272 PDGT-FWIAIIK-LDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAE-DGTI--IRNLVDPTGQLMSFVTS 346 (370)
Q Consensus 272 ~~G~-lwv~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~-~g~~--~~~~~~~~g~~~~~~t~ 346 (370)
+||+ +|++... . ..-.++.+++ +|+. +..+.. |. .+..
T Consensus 268 pdg~~l~v~~~~~~--------------------------------~~i~v~~~~~~~g~~~~~~~~~~--g~---~~~~ 310 (361)
T 3scy_A 268 PDGKYLYASNRLKA--------------------------------DGVAIFKVDETNGTLTKVGYQLT--GI---HPRN 310 (361)
T ss_dssp TTSSEEEEEECSSS--------------------------------CEEEEEEECTTTCCEEEEEEEEC--SS---CCCE
T ss_pred CCCCEEEEECCCCC--------------------------------CEEEEEEEcCCCCcEEEeeEecC--CC---CCce
Confidence 9997 6676654 2 1123555663 4553 333333 32 2334
Q ss_pred EEEE-C-CEEEEEeCCCCeEEEEeC
Q 017520 347 GLQV-D-NHLYVISLTSNFIGKVQL 369 (370)
Q Consensus 347 ~~~~-~-g~L~~gs~~~~~i~~~~~ 369 (370)
+... + ..||+++...+.|.++++
T Consensus 311 ~~~spdg~~l~~~~~~~~~v~v~~~ 335 (361)
T 3scy_A 311 FIITPNGKYLLVACRDTNVIQIFER 335 (361)
T ss_dssp EEECTTSCEEEEEETTTTEEEEEEE
T ss_pred EEECCCCCEEEEEECCCCCEEEEEE
Confidence 4443 4 469999988888888654
No 87
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.34 E-value=8.1e-11 Score=107.17 Aligned_cols=179 Identities=13% Similarity=0.067 Sum_probs=122.7
Q ss_pred CCCcceEEcCCCcEEEEecC---CeEEEEe--CCeEEEEEec--CCCceeceEEcCCCcEEEEeCC-CceEEEcCC-C-e
Q 017520 79 NHPEDASMDKNGVIYTATRD---GWIKRLQ--DGTWVNWKFI--DSQTLVGLTSTKEGHLIICDNA-NGLHKVSED-G-V 148 (370)
Q Consensus 79 ~~P~~i~~d~~G~l~v~~~~---g~I~~~~--~g~~~~~~~~--~~~p~~gl~~d~~G~L~v~~~~-~gi~~~~~~-g-~ 148 (370)
..|.+|+++++|++|+++.. .+|++++ +|+++.+... ...+. |++..+++.+|+++.. +.|++++.+ + .
T Consensus 72 ~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~-g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~ 150 (306)
T 2p4o_A 72 GKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLN-GITPLSDTQYLTADSYRGAIWLIDVVQPSG 150 (306)
T ss_dssp SEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEE-EEEESSSSEEEEEETTTTEEEEEETTTTEE
T ss_pred CCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCccccC-cccccCCCcEEEEECCCCeEEEEeCCCCcE
Confidence 36999999999999999832 3599987 7887766543 23467 8888877889999864 578999943 3 2
Q ss_pred EEEE-ee-----cCCcccccccceEEcCCC-cEEEEeCCCCCCCccceecccccCCCceEEEEeCCC-Ce---EEEEecC
Q 017520 149 ENFL-SY-----VNGSKLRFANDVVEASDG-SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSS-NI---TTLVADG 217 (370)
Q Consensus 149 ~~~~-~~-----~~g~~~~~~~~l~~d~~G-~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t-~~---~~~~~~~ 217 (370)
+... .. .....+..+++| +++| .||+++. ..++|++|+.+. +. .+.+. .
T Consensus 151 ~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~-----------------~~~~I~~~~~~~~g~~~~~~~~~-~ 210 (306)
T 2p4o_A 151 SIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNT-----------------EKMLLLRIPVDSTDKPGEPEIFV-E 210 (306)
T ss_dssp EEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEET-----------------TTTEEEEEEBCTTSCBCCCEEEE-E
T ss_pred eEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeC-----------------CCCEEEEEEeCCCCCCCccEEEe-c
Confidence 3221 11 111234578888 5665 7999986 357899999764 32 23332 2
Q ss_pred CCCccceEEccCCCEEEEEeCCc--EEEEEeCCCCCCceeee--ccCCCCCCCceeEC---CCC-CEEEEEecC
Q 017520 218 FYFANGVALSRDEDYVVVCESWK--CRKYWLKGERKGKLETF--AENLPGAPDNINLA---PDG-TFWIAIIKL 283 (370)
Q Consensus 218 ~~~p~gi~~~~dg~~l~v~~~~~--l~~~~~~~~~~~~~~~~--~~~~~g~p~~i~~d---~~G-~lwv~~~~~ 283 (370)
+..|.|++++++|+ +|+++..+ |.+|+.++. .... .......|.+++++ +++ +|||++..+
T Consensus 211 ~~~P~gi~vd~dG~-l~va~~~~~~V~~~~~~G~----~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 211 QTNIDDFAFDVEGN-LYGATHIYNSVVRIAPDRS----TTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp SCCCSSEEEBTTCC-EEEECBTTCCEEEECTTCC----EEEEECGGGTCTTEEEEEECCSTTTTTEEEEEECTT
T ss_pred cCCCCCeEECCCCC-EEEEeCCCCeEEEECCCCC----EEEEeecccccCCceEEEEecccCCCCEEEEECCCC
Confidence 46799999999998 89999765 999986542 2111 11111358999998 674 799998764
No 88
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.32 E-value=1.1e-09 Score=96.54 Aligned_cols=190 Identities=11% Similarity=0.148 Sum_probs=125.0
Q ss_pred CCcCCCcceEEcCC-CcEEE-EecCCeEEEEe-CCeEEEEEec--CCCceeceEEcCCCcEEEEeCC-CceEEEc--CCC
Q 017520 76 GSVNHPEDASMDKN-GVIYT-ATRDGWIKRLQ-DGTWVNWKFI--DSQTLVGLTSTKEGHLIICDNA-NGLHKVS--EDG 147 (370)
Q Consensus 76 ~~~~~P~~i~~d~~-G~l~v-~~~~g~I~~~~-~g~~~~~~~~--~~~p~~gl~~d~~G~L~v~~~~-~gi~~~~--~~g 147 (370)
|....+.+|+.|++ +.||+ .+.++.|++++ +|++..-... ...+- ||+++++|.+||++.. ++++.++ .++
T Consensus 24 g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~g~v~~~i~l~g~~D~E-GIa~~~~g~~~vs~E~~~~l~~~~v~~~~ 102 (255)
T 3qqz_A 24 GITNNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDLIRTIPLDFVKDLE-TIEYIGDNQFVISDERDYAIYVISLTPNS 102 (255)
T ss_dssp TCCSCEEEEEEETTTTEEEEEEETTEEEEEEETTCCEEEEEECSSCSSEE-EEEECSTTEEEEEETTTTEEEEEEECTTC
T ss_pred CcccCcceeEEeCCCCEEEEEECCCCeEEEEeCCCCEEEEEecCCCCChH-HeEEeCCCEEEEEECCCCcEEEEEcCCCC
Confidence 44467999999974 67997 55889999999 8775543322 24678 9999999999998755 5677766 344
Q ss_pred -eEEEEee-cC---CcccccccceEEcCCC-cEEEEeCCCCCCCccceecccccCCCceEEEEeC--CCCeEEEEec---
Q 017520 148 -VENFLSY-VN---GSKLRFANDVVEASDG-SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDP--SSNITTLVAD--- 216 (370)
Q Consensus 148 -~~~~~~~-~~---g~~~~~~~~l~~d~~G-~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~--~t~~~~~~~~--- 216 (370)
+..+... .+ ........+|++|+++ +||++... ....||.++. .+...+....
T Consensus 103 ~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~----------------~p~~i~~~~g~~~~~~l~i~~~~~~ 166 (255)
T 3qqz_A 103 EVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEK----------------NPIEVYKVNGLLSSNELHISKDKAL 166 (255)
T ss_dssp CEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEES----------------SSEEEEEEESTTCSSCCEEEECHHH
T ss_pred eeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECc----------------CCceEEEEcccccCCceeeecchhh
Confidence 3322111 11 1122345789999987 79998643 2347888872 2233443311
Q ss_pred ----CCCCccceEEccCCCEEEEEeCCc--EEEEEeCCCCCCceeeeccCC------CCCCCceeECCCCCEEEEEecC
Q 017520 217 ----GFYFANGVALSRDEDYVVVCESWK--CRKYWLKGERKGKLETFAENL------PGAPDNINLAPDGTFWIAIIKL 283 (370)
Q Consensus 217 ----~~~~p~gi~~~~dg~~l~v~~~~~--l~~~~~~~~~~~~~~~~~~~~------~g~p~~i~~d~~G~lwv~~~~~ 283 (370)
....+.+++++|..+.+|+..... |..+|.++... ....+.... -..|.||++|++|++||++-.+
T Consensus 167 ~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~~~-~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~n 244 (255)
T 3qqz_A 167 QRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVI-GEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEPN 244 (255)
T ss_dssp HHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCCEE-EEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETTT
T ss_pred ccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCCEE-EEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCCc
Confidence 244678999999888888877665 99999776421 111111111 1258999999999999997554
No 89
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.31 E-value=2.4e-09 Score=105.43 Aligned_cols=228 Identities=8% Similarity=-0.043 Sum_probs=148.1
Q ss_pred EEcCCCcEEEEe-cCCeEEEEe--CCeEEEEEecCCCceeceEEcCCCc-EEEEeCCCceEEEcC---CCeEEEEeecCC
Q 017520 85 SMDKNGVIYTAT-RDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGH-LIICDNANGLHKVSE---DGVENFLSYVNG 157 (370)
Q Consensus 85 ~~d~~G~l~v~~-~~g~I~~~~--~g~~~~~~~~~~~p~~gl~~d~~G~-L~v~~~~~gi~~~~~---~g~~~~~~~~~g 157 (370)
+++++|.+|++. .++.|..+| +++..........++ ++++++||+ ||+++.++.|..++. ++ +.+.....+
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~~~-~v~~spdg~~l~v~~~d~~V~v~D~~~~t~-~~~~~i~~g 221 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYAVH-ISRMSASGRYLLVIGRDARIDMIDLWAKEP-TKVAEIKIG 221 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTTEE-EEEECTTSCEEEEEETTSEEEEEETTSSSC-EEEEEEECC
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcccc-eEEECCCCCEEEEECCCCeEEEEECcCCCC-cEEEEEecC
Confidence 478889999887 678899999 676544444344588 999999995 888887766777774 33 222221122
Q ss_pred cccccccceEEcC----CCc-EEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecC------------CCC
Q 017520 158 SKLRFANDVVEAS----DGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG------------FYF 220 (370)
Q Consensus 158 ~~~~~~~~l~~d~----~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~------------~~~ 220 (370)
..+..+++++ ||+ +|+++. ..+.|..+|..+++....... ...
T Consensus 222 ---~~p~~va~sp~~~~dg~~l~v~~~-----------------~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~ 281 (543)
T 1nir_A 222 ---IEARSVESSKFKGYEDRYTIAGAY-----------------WPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPR 281 (543)
T ss_dssp ---SEEEEEEECCSTTCTTTEEEEEEE-----------------ESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCC
T ss_pred ---CCcceEEeCCCcCCCCCEEEEEEc-----------------cCCeEEEEeccccccceeecccCcccCccccccCCc
Confidence 3678999999 985 777753 246788899887765433221 114
Q ss_pred ccceEEccCCCEEEEEeCCc--EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCC-EEEEEecCchhHHHhhhcchhH
Q 017520 221 ANGVALSRDEDYVVVCESWK--CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGT-FWIAIIKLDARRMKILNSSKLI 297 (370)
Q Consensus 221 p~gi~~~~dg~~l~v~~~~~--l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~-lwv~~~~~~~~~~~~~~~~~~~ 297 (370)
+.++++++++..+|++.... |+.++....+.-....+ .....|.+++++++|+ +|++....
T Consensus 282 v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i--~~~~~~~~~~~spdg~~l~va~~~~-------------- 345 (543)
T 1nir_A 282 VAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSI--GAAPFLHDGGWDSSHRYFMTAANNS-------------- 345 (543)
T ss_dssp EEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEE--ECCSSCCCEEECTTSCEEEEEEGGG--------------
T ss_pred eEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEe--ccCcCccCceECCCCCEEEEEecCC--------------
Confidence 56789999999888887655 99999865432121122 1244688999999998 45555432
Q ss_pred HHHHHhCCccccccccCCCceEEEEECC-CCcEEEEEeCCCCCccccceeEEEEC-CEEEEEeC-CCCeEEEEeCC
Q 017520 298 KHVLAAYPKLFSQFITLGGGAHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQVD-NHLYVISL-TSNFIGKVQLS 370 (370)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~g~v~~~~~-~g~~~~~~~~~~g~~~~~~t~~~~~~-g~L~~gs~-~~~~i~~~~~~ 370 (370)
+.|..+|. .|+++..+.............+...+ +.+|+.+- ..+.|.+++++
T Consensus 346 --------------------~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~ 401 (543)
T 1nir_A 346 --------------------NKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTD 401 (543)
T ss_dssp --------------------TEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECC
T ss_pred --------------------CeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEEeccCCCceEEEEEeC
Confidence 24677885 57888777642211111122223333 78888764 56788888754
No 90
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.30 E-value=2.8e-09 Score=97.16 Aligned_cols=172 Identities=10% Similarity=0.055 Sum_probs=111.7
Q ss_pred CCcEEEEe-cCCeEEEEe-C--CeEEEE--EecCCCceeceEEcCCCc-EEEEeCC-CceEEEc-C--CC-eEEEEeecC
Q 017520 89 NGVIYTAT-RDGWIKRLQ-D--GTWVNW--KFIDSQTLVGLTSTKEGH-LIICDNA-NGLHKVS-E--DG-VENFLSYVN 156 (370)
Q Consensus 89 ~G~l~v~~-~~g~I~~~~-~--g~~~~~--~~~~~~p~~gl~~d~~G~-L~v~~~~-~gi~~~~-~--~g-~~~~~~~~~ 156 (370)
+..+|+++ .++.|..|+ + ++.+.. ......|. +++++++|+ ||++... +.+..++ . +| .+.+.....
T Consensus 4 ~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 82 (343)
T 1ri6_A 4 KQTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQ-PMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESAL 82 (343)
T ss_dssp EEEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCC-CEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEC
T ss_pred eEEEEEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCc-eEEECCCCCEEEEeecCCCeEEEEEecCCCCceeecccccc
Confidence 45688885 688899998 3 544332 33456788 999999997 8888765 4565555 3 55 444432211
Q ss_pred CcccccccceEEcCCCc-EEEEeCCCCCCCccceecccccCCCceEEEEeCCCC---eEEEEecCCCCccceEEccCCCE
Q 017520 157 GSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSN---ITTLVADGFYFANGVALSRDEDY 232 (370)
Q Consensus 157 g~~~~~~~~l~~d~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~---~~~~~~~~~~~p~gi~~~~dg~~ 232 (370)
+ ..+..++++++|+ +|++.. ..+.|..||.+.+ +..........+.++++++|++.
T Consensus 83 ~---~~~~~~~~s~dg~~l~~~~~-----------------~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~ 142 (343)
T 1ri6_A 83 P---GSLTHISTDHQGQFVFVGSY-----------------NAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRT 142 (343)
T ss_dssp S---SCCSEEEECTTSSEEEEEET-----------------TTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSE
T ss_pred C---CCCcEEEEcCCCCEEEEEec-----------------CCCeEEEEECCCCccccccccccCCCCceEEEECCCCCE
Confidence 1 2678899999997 777754 2466777877322 23333344556899999999999
Q ss_pred EEEEeC-Cc-EEEEEeCC-CCCCcee--eeccCCCCCCCceeECCCCC-EEEEEe
Q 017520 233 VVVCES-WK-CRKYWLKG-ERKGKLE--TFAENLPGAPDNINLAPDGT-FWIAII 281 (370)
Q Consensus 233 l~v~~~-~~-l~~~~~~~-~~~~~~~--~~~~~~~g~p~~i~~d~~G~-lwv~~~ 281 (370)
+|++.. .+ |.+|++.. .+..... .........|..++++++|+ +|++..
T Consensus 143 l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~ 197 (343)
T 1ri6_A 143 LWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNE 197 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEET
T ss_pred EEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeC
Confidence 999984 34 99999875 3221111 22112223577899999997 677753
No 91
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.28 E-value=3.4e-10 Score=100.36 Aligned_cols=194 Identities=15% Similarity=0.168 Sum_probs=130.4
Q ss_pred CceeceEEcCCCcEEEEeCC---CceEEEc-CCC-eEEEEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecc
Q 017520 118 QTLVGLTSTKEGHLIICDNA---NGLHKVS-EDG-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDI 192 (370)
Q Consensus 118 ~p~~gl~~d~~G~L~v~~~~---~gi~~~~-~~g-~~~~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~ 192 (370)
.|. ||++++||.||+++.. +.|..+| ++| +..-... +. ..+..+++++ ++++|+++.
T Consensus 22 f~~-Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l-~~--~~fgeGi~~~-g~~lyv~t~------------- 83 (266)
T 2iwa_A 22 FTQ-GLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKM-DD--SYFGEGLTLL-NEKLYQVVW------------- 83 (266)
T ss_dssp CEE-EEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEEC-CT--TCCEEEEEEE-TTEEEEEET-------------
T ss_pred Ccc-cEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEec-CC--CcceEEEEEe-CCEEEEEEe-------------
Confidence 478 9999988999998742 4689999 677 3322221 22 1345567776 458999975
Q ss_pred cccCCCceEEEEeCCCCeEEEEecCCCCccceEEccCCCEEEEEeCCc-EEEEEeCCCCCCceeeeccC-CC-CCCCcee
Q 017520 193 LEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWK-CRKYWLKGERKGKLETFAEN-LP-GAPDNIN 269 (370)
Q Consensus 193 ~~~~~~g~l~~~d~~t~~~~~~~~~~~~p~gi~~~~dg~~l~v~~~~~-l~~~~~~~~~~~~~~~~~~~-~~-g~p~~i~ 269 (370)
.++.+++||+++.++.....-. .+.|+.+++||+.+|+++..+ |..+|.++.+....-..... .+ ..|+.+.
T Consensus 84 ----~~~~v~viD~~t~~v~~~i~~g-~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele 158 (266)
T 2iwa_A 84 ----LKNIGFIYDRRTLSNIKNFTHQ-MKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELE 158 (266)
T ss_dssp ----TCSEEEEEETTTTEEEEEEECC-SSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEE
T ss_pred ----cCCEEEEEECCCCcEEEEEECC-CCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEE
Confidence 4578999999887654333222 478888999999999998655 99999766432111111111 11 1466777
Q ss_pred ECCCCCEEEEEecCchhHHHhhhcchhHHHHHHhCCccccccccCCCceEEEEECC-CCcEEEEEeCCC--------CC-
Q 017520 270 LAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAE-DGTIIRNLVDPT--------GQ- 339 (370)
Q Consensus 270 ~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~-~g~~~~~~~~~~--------g~- 339 (370)
+. +|.+|+..... +.|.++|+ .|+++..+.... +.
T Consensus 159 ~~-dg~lyvn~~~~----------------------------------~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~ 203 (266)
T 2iwa_A 159 YI-NGEVWANIWQT----------------------------------DCIARISAKDGTLLGWILLPNLRKKLIDEGFR 203 (266)
T ss_dssp EE-TTEEEEEETTS----------------------------------SEEEEEETTTCCEEEEEECHHHHHHHHHTTCT
T ss_pred EE-CCEEEEecCCC----------------------------------CeEEEEECCCCcEEEEEECCCccccccccccc
Confidence 77 78999998654 46899997 688988886531 00
Q ss_pred ccccceeEEEE--CCEEEEEeCCCCeEEEEeC
Q 017520 340 LMSFVTSGLQV--DNHLYVISLTSNFIGKVQL 369 (370)
Q Consensus 340 ~~~~~t~~~~~--~g~L~~gs~~~~~i~~~~~ 369 (370)
.......+... +++||+++...+.|..+++
T Consensus 204 ~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l 235 (266)
T 2iwa_A 204 DIDVLNGIAWDQENKRIFVTGKLWPKLFEIKL 235 (266)
T ss_dssp TCCCEEEEEEETTTTEEEEEETTCSEEEEEEE
T ss_pred ccCceEEEEEcCCCCEEEEECCCCCeEEEEEE
Confidence 01233455554 3689999999999999875
No 92
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=99.28 E-value=4.2e-09 Score=96.94 Aligned_cols=221 Identities=9% Similarity=0.032 Sum_probs=132.7
Q ss_pred EEEEEecCCCceeceEEcCCCcEEEEeC-CCceEEEcC-CC-eEEEEee--cCCcccccccceEEcCC----CcEEEEeC
Q 017520 109 WVNWKFIDSQTLVGLTSTKEGHLIICDN-ANGLHKVSE-DG-VENFLSY--VNGSKLRFANDVVEASD----GSLYFTVS 179 (370)
Q Consensus 109 ~~~~~~~~~~p~~gl~~d~~G~L~v~~~-~~gi~~~~~-~g-~~~~~~~--~~g~~~~~~~~l~~d~~----G~l~v~d~ 179 (370)
++++......|. +|++.+||+|||++. .+.|++++. +| .+.+... ........+.+|+++|+ |.||++.+
T Consensus 24 ~~~va~gL~~P~-~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt 102 (347)
T 3das_A 24 LRTVATGLNSPW-GLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFT 102 (347)
T ss_dssp EEEEECCCSSEE-EEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEE
T ss_pred eEEeecCCCCce-EEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEe
Confidence 445566677899 999999999999997 466899984 56 5444321 11122457889999984 88999753
Q ss_pred CCCCCCccceecccccCCCceEEEEeCCCC--------eEEEEec-----CCCCccceEEccCCCEEEEEeC--------
Q 017520 180 SSKYLPHEYCLDILEGKPHGQLLKYDPSSN--------ITTLVAD-----GFYFANGVALSRDEDYVVVCES-------- 238 (370)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~--------~~~~~~~-----~~~~p~gi~~~~dg~~l~v~~~-------- 238 (370)
. ...++|.|+..+.+ ..+++.. ...+...|++++||. ||++.-
T Consensus 103 ~---------------~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~-Lyvt~Gd~~~~~~~ 166 (347)
T 3das_A 103 S---------------ASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKM-LYAGTGESGDTGLS 166 (347)
T ss_dssp C---------------SSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSC-EEEECBCTTCGGGT
T ss_pred c---------------CCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCC-EEEEECCCCCCccc
Confidence 2 12357888865431 2233322 234566799999997 999842
Q ss_pred ------Cc-EEEEEeCCCC-----CCceeeeccCCCCCCCceeECCCCCEEEEEecCchhHHHhhhcchhHHHHHHhCCc
Q 017520 239 ------WK-CRKYWLKGER-----KGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPK 306 (370)
Q Consensus 239 ------~~-l~~~~~~~~~-----~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (370)
.+ |+|+++++.. ....+.+...+ ..|.++++|++|+||++.++.+. ++
T Consensus 167 qd~~~~~G~IlRi~~dG~ip~~nPf~~~~i~a~G~-RNp~Gla~dp~G~L~~~d~g~~~-------------------~d 226 (347)
T 3das_A 167 QDRKSLGGKILRMTPDGEPAPGNPFPGSPVYSYGH-RNVQGLAWDDKQRLFASEFGQDT-------------------WD 226 (347)
T ss_dssp TCTTCSTTCEEEECTTSSBCTTCSSTTCCEEEBCC-SBCCEEEECTTCCEEEEECCSSS-------------------CE
T ss_pred cCCCCCCCEEEEEeCCCCccCCCCCCCCeEEeeCC-CCcceEEECCCCCEEEEecCCCC-------------------Cc
Confidence 23 9999987641 00123443222 24889999999999999986531 01
Q ss_pred cccccccCCCceEEEEEC---CCC--cEEEEEeCCCCCccccceeEEEECCEEEEEeCCCCeEEEEeCC
Q 017520 307 LFSQFITLGGGAHLIHVA---EDG--TIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIGKVQLS 370 (370)
Q Consensus 307 ~~~~~~~~~~~g~v~~~~---~~g--~~~~~~~~~~g~~~~~~t~~~~~~g~L~~gs~~~~~i~~~~~~ 370 (370)
.+..+.....||.=++.. ..+ ..+..|.. . ....+.+...+|.+|++.+.+..|.+++++
T Consensus 227 eln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~-~---~~ap~G~~~~~g~~~~~~l~~~~l~~v~~~ 291 (347)
T 3das_A 227 ELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWST-D---EASPSGIAYAEGSVWMAGLRGERLWRIPLK 291 (347)
T ss_dssp EEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECT-T---TCCEEEEEEETTEEEEEESTTCSEEEEEEE
T ss_pred eeeEEcCCCEecCCcccCCCCCccccCCcEecCC-C---CCCCcceEEEcCceeeccccCCEEEEEEec
Confidence 110000011111000000 000 01112211 1 124567778899999999999999998763
No 93
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.28 E-value=1.2e-09 Score=99.42 Aligned_cols=219 Identities=14% Similarity=0.048 Sum_probs=138.3
Q ss_pred CCcceEEcCCC-cEEEEe-cCCeEEEEe--CCeEEEEEecCC------CceeceEEcCCC-cEEEEe------------C
Q 017520 80 HPEDASMDKNG-VIYTAT-RDGWIKRLQ--DGTWVNWKFIDS------QTLVGLTSTKEG-HLIICD------------N 136 (370)
Q Consensus 80 ~P~~i~~d~~G-~l~v~~-~~g~I~~~~--~g~~~~~~~~~~------~p~~gl~~d~~G-~L~v~~------------~ 136 (370)
.|.+++++++| .+|++. .++.|+.++ +++......... .|. +++++++| .||+++ .
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~~~~~~~~~ 113 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLF-GAALSPDGKTLAIYESPVRLELTHFEVQ 113 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTT-CEEECTTSSEEEEEEEEEEECSSCEEEC
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccccccc-ceEECCCCCEEEEEeccccccccccccc
Confidence 49999999998 578777 568899999 666543332222 678 99999999 588875 2
Q ss_pred CCceEEEc-CCC-eEEEEeecCCcccccccceEEcCCCc-EEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEE
Q 017520 137 ANGLHKVS-EDG-VENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTL 213 (370)
Q Consensus 137 ~~gi~~~~-~~g-~~~~~~~~~g~~~~~~~~l~~d~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~ 213 (370)
...|..++ .++ ....... + ..+..++++++|+ +|+++ +.|+.+|.++++...
T Consensus 114 ~~~i~v~d~~~~~~~~~~~~--~---~~~~~~~~s~dg~~l~~~~--------------------~~i~~~d~~~~~~~~ 168 (337)
T 1pby_B 114 PTRVALYDAETLSRRKAFEA--P---RQITMLAWARDGSKLYGLG--------------------RDLHVMDPEAGTLVE 168 (337)
T ss_dssp CCEEEEEETTTTEEEEEEEC--C---SSCCCEEECTTSSCEEEES--------------------SSEEEEETTTTEEEE
T ss_pred CceEEEEECCCCcEEEEEeC--C---CCcceeEECCCCCEEEEeC--------------------CeEEEEECCCCcEee
Confidence 35688888 555 3222221 1 3577899999996 88772 469999998887654
Q ss_pred EecCCCCccceEEccCCCEEEEEeCCc-------------------------EEEEEeCCCCCCceeeeccCCCCCCCce
Q 017520 214 VADGFYFANGVALSRDEDYVVVCESWK-------------------------CRKYWLKGERKGKLETFAENLPGAPDNI 268 (370)
Q Consensus 214 ~~~~~~~p~gi~~~~dg~~l~v~~~~~-------------------------l~~~~~~~~~~~~~~~~~~~~~g~p~~i 268 (370)
.......+..+++++|++.+|++.... |+++|+.+.+.. ...+ ......|.++
T Consensus 169 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~-~~~~-~~~~~~~~~~ 246 (337)
T 1pby_B 169 DKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA-MREV-RIMDVFYFST 246 (337)
T ss_dssp EECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE-EEEE-EECSSCEEEE
T ss_pred eeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce-Eeec-CCCCCceeeE
Confidence 443333344567889988777766443 356676543221 1111 1222346679
Q ss_pred eECCCCC-EEEEEecCchhHHHhhhcchhHHHHHHhCCccccccccCCCceEEEEECC-CCcEEEEEeCCCCCcccccee
Q 017520 269 NLAPDGT-FWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAE-DGTIIRNLVDPTGQLMSFVTS 346 (370)
Q Consensus 269 ~~d~~G~-lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~-~g~~~~~~~~~~g~~~~~~t~ 346 (370)
+++++|+ +|++ .+ .+..+|. .++.+..+.... .+..
T Consensus 247 ~~s~dg~~l~~~--~~-----------------------------------~v~~~d~~~~~~~~~~~~~~-----~~~~ 284 (337)
T 1pby_B 247 AVNPAKTRAFGA--YN-----------------------------------VLESFDLEKNASIKRVPLPH-----SYYS 284 (337)
T ss_dssp EECTTSSEEEEE--ES-----------------------------------EEEEEETTTTEEEEEEECSS-----CCCE
T ss_pred EECCCCCEEEEe--CC-----------------------------------eEEEEECCCCcCcceecCCC-----ceee
Confidence 9999996 6665 22 3777775 466666665432 2233
Q ss_pred EEEE-C-CEEEEEeCCCCeEEEEeC
Q 017520 347 GLQV-D-NHLYVISLTSNFIGKVQL 369 (370)
Q Consensus 347 ~~~~-~-g~L~~gs~~~~~i~~~~~ 369 (370)
+... + ..||+++. .+.|.++++
T Consensus 285 ~~~s~dg~~l~~~~~-~~~i~v~d~ 308 (337)
T 1pby_B 285 VNVSTDGSTVWLGGA-LGDLAAYDA 308 (337)
T ss_dssp EEECTTSCEEEEESB-SSEEEEEET
T ss_pred EEECCCCCEEEEEcC-CCcEEEEEC
Confidence 3333 3 45777744 566776664
No 94
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.25 E-value=1.1e-08 Score=95.33 Aligned_cols=166 Identities=19% Similarity=0.238 Sum_probs=114.3
Q ss_pred CcEEEEe-cCCeEEEEe--CCeEEEEEecCCCceeceEEcCCCc-EEEEeCC-CceEEEc-CCC-eEEEEeecCCccccc
Q 017520 90 GVIYTAT-RDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGH-LIICDNA-NGLHKVS-EDG-VENFLSYVNGSKLRF 162 (370)
Q Consensus 90 G~l~v~~-~~g~I~~~~--~g~~~~~~~~~~~p~~gl~~d~~G~-L~v~~~~-~gi~~~~-~~g-~~~~~~~~~g~~~~~ 162 (370)
+.+|++. .++.|..++ +++..........+. +++++++|+ ||++... +.|..++ .++ ....... + ..
T Consensus 2 ~~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~--~---~~ 75 (391)
T 1l0q_A 2 TFAYIANSESDNISVIDVTSNKVTATIPVGSNPM-GAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPA--G---SS 75 (391)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEECSSSEE-EEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEEC--S---SS
T ss_pred CEEEEEcCCCCEEEEEECCCCeEEEEeecCCCcc-eEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEEC--C---CC
Confidence 3566655 788999999 666555444555688 999999997 6676543 4577777 566 3322221 1 26
Q ss_pred ccceEEcCCCc-EEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecCCCCccceEEccCCCEEEEEeCCc-
Q 017520 163 ANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWK- 240 (370)
Q Consensus 163 ~~~l~~d~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~p~gi~~~~dg~~l~v~~~~~- 240 (370)
++.++++++|+ +|++.. ..+.|+.+|..+++..........+.++++++|++.+|++....
T Consensus 76 v~~~~~spdg~~l~~~~~-----------------~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~ 138 (391)
T 1l0q_A 76 PQGVAVSPDGKQVYVTNM-----------------ASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDK 138 (391)
T ss_dssp EEEEEECTTSSEEEEEET-----------------TTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTT
T ss_pred ccceEECCCCCEEEEEEC-----------------CCCEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCC
Confidence 78899999996 777754 34789999999887766555556788999999999888887644
Q ss_pred -EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCC-EEEEEec
Q 017520 241 -CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGT-FWIAIIK 282 (370)
Q Consensus 241 -l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~-lwv~~~~ 282 (370)
|+.||+...+. ...+. ....+..++++++|+ +|++...
T Consensus 139 ~v~~~d~~~~~~--~~~~~--~~~~~~~~~~~~dg~~l~~~~~~ 178 (391)
T 1l0q_A 139 TVSVINTVTKAV--INTVS--VGRSPKGIAVTPDGTKVYVANFD 178 (391)
T ss_dssp EEEEEETTTTEE--EEEEE--CCSSEEEEEECTTSSEEEEEETT
T ss_pred EEEEEECCCCcE--EEEEe--cCCCcceEEECCCCCEEEEEeCC
Confidence 99999765321 12221 223467889999996 5666543
No 95
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.21 E-value=1.6e-09 Score=95.97 Aligned_cols=149 Identities=11% Similarity=0.042 Sum_probs=104.8
Q ss_pred CCCcceEEcCCCcEEEEe-cCCeEEEEe--CCeEEEEEecC-CCceeceEEcCCCcEEEEeCCCceEEEc-CCC--eEEE
Q 017520 79 NHPEDASMDKNGVIYTAT-RDGWIKRLQ--DGTWVNWKFID-SQTLVGLTSTKEGHLIICDNANGLHKVS-EDG--VENF 151 (370)
Q Consensus 79 ~~P~~i~~d~~G~l~v~~-~~g~I~~~~--~g~~~~~~~~~-~~p~~gl~~d~~G~L~v~~~~~gi~~~~-~~g--~~~~ 151 (370)
..+|+++++ ++.||+++ .++.+..+| +++...-.... +.+. +++.| .+.||+++..+.+..+| ++. ...+
T Consensus 66 ~fgeGi~~~-g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g~~~g~-glt~D-g~~l~vs~gs~~l~viD~~t~~v~~~I 142 (266)
T 2iwa_A 66 YFGEGLTLL-NEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQMKDGW-GLATD-GKILYGSDGTSILYEIDPHTFKLIKKH 142 (266)
T ss_dssp CCEEEEEEE-TTEEEEEETTCSEEEEEETTTTEEEEEEECCSSSCC-EEEEC-SSSEEEECSSSEEEEECTTTCCEEEEE
T ss_pred cceEEEEEe-CCEEEEEEecCCEEEEEECCCCcEEEEEECCCCCeE-EEEEC-CCEEEEECCCCeEEEEECCCCcEEEEE
Confidence 467788887 46999999 678999999 56544333334 3344 44443 24799998656788899 444 3333
Q ss_pred EeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEec--CC-----------
Q 017520 152 LSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD--GF----------- 218 (370)
Q Consensus 152 ~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~--~~----------- 218 (370)
.-...+.+...+|.+.+. +|++|+... ..+.|.++|++++++..... ++
T Consensus 143 ~Vg~~~~p~~~~nele~~-dg~lyvn~~-----------------~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~ 204 (266)
T 2iwa_A 143 NVKYNGHRVIRLNELEYI-NGEVWANIW-----------------QTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRD 204 (266)
T ss_dssp ECEETTEECCCEEEEEEE-TTEEEEEET-----------------TSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTT
T ss_pred EECCCCcccccceeEEEE-CCEEEEecC-----------------CCCeEEEEECCCCcEEEEEECCCcccccccccccc
Confidence 222234556678999887 789999975 34789999999988754432 11
Q ss_pred -CCccceEEccCCCEEEEEeCCc--EEEEEeCC
Q 017520 219 -YFANGVALSRDEDYVVVCESWK--CRKYWLKG 248 (370)
Q Consensus 219 -~~p~gi~~~~dg~~l~v~~~~~--l~~~~~~~ 248 (370)
..||||+++++++.+|++.... |+.+++..
T Consensus 205 ~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 205 IDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp CCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred cCceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence 3679999999999999999755 88887654
No 96
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.19 E-value=1.1e-08 Score=96.72 Aligned_cols=176 Identities=13% Similarity=0.131 Sum_probs=121.4
Q ss_pred CCcceEEcCCCcEEEEe-cCCeEEEEe--CCeEEEEEe------cCCCceeceEEcCCCcEEEEeCC-CceEEEc-CCC-
Q 017520 80 HPEDASMDKNGVIYTAT-RDGWIKRLQ--DGTWVNWKF------IDSQTLVGLTSTKEGHLIICDNA-NGLHKVS-EDG- 147 (370)
Q Consensus 80 ~P~~i~~d~~G~l~v~~-~~g~I~~~~--~g~~~~~~~------~~~~p~~gl~~d~~G~L~v~~~~-~gi~~~~-~~g- 147 (370)
.|.++++++++.+|++. .++.|..++ +++...... ..+.+. +++++++|++|++... +.|..++ +++
T Consensus 124 ~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~s~~~d~~v~~~d~~~~~ 202 (433)
T 3bws_A 124 QPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVE-TISIPEHNELWVSQMQANAVHVFDLKTLA 202 (433)
T ss_dssp CBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEE-EEEEGGGTEEEEEEGGGTEEEEEETTTCC
T ss_pred CceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCcee-EEEEcCCCEEEEEECCCCEEEEEECCCce
Confidence 57789999988888887 567799999 566554321 123456 7999999999988765 4577777 555
Q ss_pred -eEEEEeecCCcccccccceEEcCCCc-EEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecCCCCccceE
Q 017520 148 -VENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVA 225 (370)
Q Consensus 148 -~~~~~~~~~g~~~~~~~~l~~d~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~p~gi~ 225 (370)
...+.. . ...+..++++++|+ +|++.. .++.|..+|..+++..........+.+++
T Consensus 203 ~~~~~~~--~---~~~~~~~~~~~~~~~l~~~~~-----------------~~~~i~~~d~~~~~~~~~~~~~~~~~~~~ 260 (433)
T 3bws_A 203 YKATVDL--T---GKWSKILLYDPIRDLVYCSNW-----------------ISEDISVIDRKTKLEIRKTDKIGLPRGLL 260 (433)
T ss_dssp EEEEEEC--S---SSSEEEEEEETTTTEEEEEET-----------------TTTEEEEEETTTTEEEEECCCCSEEEEEE
T ss_pred EEEEEcC--C---CCCeeEEEEcCCCCEEEEEec-----------------CCCcEEEEECCCCcEEEEecCCCCceEEE
Confidence 333321 1 13678899999986 556653 34789999998887655555555688999
Q ss_pred EccCCCEEEEEeC--------Cc-EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCC-EEEEEec
Q 017520 226 LSRDEDYVVVCES--------WK-CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGT-FWIAIIK 282 (370)
Q Consensus 226 ~~~dg~~l~v~~~--------~~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~-lwv~~~~ 282 (370)
++++++.++++.. .+ |+.|++.+.+. ...+ ..++.+..++++++|+ +|++...
T Consensus 261 ~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~--~~~~--~~~~~~~~~~~~~~g~~l~~~~~~ 323 (433)
T 3bws_A 261 LSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKL--IDTI--GPPGNKRHIVSGNTENKIYVSDMC 323 (433)
T ss_dssp ECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEE--EEEE--EEEECEEEEEECSSTTEEEEEETT
T ss_pred EcCCCCEEEEEECCCCccccCCCeEEEEECCCCcE--Eeec--cCCCCcceEEECCCCCEEEEEecC
Confidence 9999998888873 44 88999765421 1111 1123467899999995 7777544
No 97
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.19 E-value=1.9e-08 Score=95.14 Aligned_cols=246 Identities=11% Similarity=0.069 Sum_probs=155.9
Q ss_pred CCcceEEcCCCcEEEEe-cCCeEEEEe--CCeE-EEEEecCCCceeceEEcCCCc-EEEEeCC-CceEEEc-CCC-eEEE
Q 017520 80 HPEDASMDKNGVIYTAT-RDGWIKRLQ--DGTW-VNWKFIDSQTLVGLTSTKEGH-LIICDNA-NGLHKVS-EDG-VENF 151 (370)
Q Consensus 80 ~P~~i~~d~~G~l~v~~-~~g~I~~~~--~g~~-~~~~~~~~~p~~gl~~d~~G~-L~v~~~~-~gi~~~~-~~g-~~~~ 151 (370)
...+++++++|.+|++. .++.|..|+ +++. ..+......+. +++++++|+ +|++... +.|..++ .++ ....
T Consensus 171 ~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~ 249 (433)
T 3bws_A 171 FVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSK-ILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRK 249 (433)
T ss_dssp EEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEE-EEEEETTTTEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred ceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCee-EEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEE
Confidence 34568888899888776 779999999 4543 33433455678 999999986 6677644 4577788 566 3222
Q ss_pred EeecCCcccccccceEEcCCCc-EEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecCCCCccceEEccCC
Q 017520 152 LSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDE 230 (370)
Q Consensus 152 ~~~~~g~~~~~~~~l~~d~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~p~gi~~~~dg 230 (370)
. .. ...+..++++++|+ +|++...... . ...++.|+.||..+++..........+.++++++++
T Consensus 250 ~---~~--~~~~~~~~~~~~g~~l~~~~~~~~~---------~-~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g 314 (433)
T 3bws_A 250 T---DK--IGLPRGLLLSKDGKELYIAQFSASN---------Q-ESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTE 314 (433)
T ss_dssp C---CC--CSEEEEEEECTTSSEEEEEEEESCT---------T-CSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSST
T ss_pred e---cC--CCCceEEEEcCCCCEEEEEECCCCc---------c-ccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCC
Confidence 1 11 13478899999995 6666431000 0 013578999999877665444333467889999999
Q ss_pred CEEEEEeCCc--EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCC-EEEEEecCchhHHHhhhcchhHHHHHHhCCcc
Q 017520 231 DYVVVCESWK--CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGT-FWIAIIKLDARRMKILNSSKLIKHVLAAYPKL 307 (370)
Q Consensus 231 ~~l~v~~~~~--l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~-lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (370)
+.+|++.... |..|++++.+. ...+ . ....+..++++++|+ +|++.........
T Consensus 315 ~~l~~~~~~~~~v~v~d~~~~~~--~~~~-~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~------------------- 371 (433)
T 3bws_A 315 NKIYVSDMCCSKIEVYDLKEKKV--QKSI-P-VFDKPNTIALSPDGKYLYVSCRGPNHPTE------------------- 371 (433)
T ss_dssp TEEEEEETTTTEEEEEETTTTEE--EEEE-E-CSSSEEEEEECTTSSEEEEEECCCCCTTT-------------------
T ss_pred CEEEEEecCCCEEEEEECCCCcE--EEEe-c-CCCCCCeEEEcCCCCEEEEEecCCCcccc-------------------
Confidence 9898886544 99999865321 1222 1 233477899999997 7777654210000
Q ss_pred ccccccCCCceEEEEECC-CCcEEEEEeCCCCCccccceeEEEE-C-CEEEEEeCCCCeEEEEeCC
Q 017520 308 FSQFITLGGGAHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQV-D-NHLYVISLTSNFIGKVQLS 370 (370)
Q Consensus 308 ~~~~~~~~~~g~v~~~~~-~g~~~~~~~~~~g~~~~~~t~~~~~-~-g~L~~gs~~~~~i~~~~~~ 370 (370)
..+......|.+..+|. .++.+..+.... .+..+... + ..|++++.....|.+++++
T Consensus 372 -~~~~~g~~dg~v~~~d~~~~~~~~~~~~~~-----~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 372 -GYLKKGLVLGKVYVIDTTTDTVKEFWEAGN-----QPTGLDVSPDNRYLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp -CTTSCCSSCCEEEEEETTTTEEEEEEECSS-----SEEEEEECTTSCEEEEEETTTTEEEEEEET
T ss_pred -ccccccccceEEEEEECCCCcEEEEecCCC-----CCceEEEcCCCCEEEEEECCCCeEEEEEec
Confidence 00001223467888985 677777776522 34555543 3 5688888778888887764
No 98
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.18 E-value=3.6e-09 Score=92.83 Aligned_cols=145 Identities=22% Similarity=0.221 Sum_probs=104.9
Q ss_pred CcceEEcCCCcEEEEe-cCCeEEEEe--CCeEEEEEecCCCceeceEEcCCCcEEEEeCCCceEEEc-CCC--eEEEEee
Q 017520 81 PEDASMDKNGVIYTAT-RDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGHLIICDNANGLHKVS-EDG--VENFLSY 154 (370)
Q Consensus 81 P~~i~~d~~G~l~v~~-~~g~I~~~~--~g~~~~~~~~~~~p~~gl~~d~~G~L~v~~~~~gi~~~~-~~g--~~~~~~~ 154 (370)
.|+|+++ ++.||+.+ .++.++.+| +++...-....+.+. |++.| .+.||+++....|..+| ++. ...+.-.
T Consensus 89 geGit~~-g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~eG~-glt~d-g~~L~~SdGs~~i~~iDp~T~~v~~~I~V~ 165 (262)
T 3nol_A 89 GEGISDW-KDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDGEGW-GLTHN-DQYLIMSDGTPVLRFLDPESLTPVRTITVT 165 (262)
T ss_dssp EEEEEEE-TTEEEEEESSSSEEEEEETTTCCEEEEEECSSCCC-CEEEC-SSCEEECCSSSEEEEECTTTCSEEEEEECE
T ss_pred eeEEEEe-CCEEEEEEeeCCEEEEEECccCcEEEEEECCCCce-EEecC-CCEEEEECCCCeEEEEcCCCCeEEEEEEec
Confidence 4778887 45999999 578899999 566544334455677 88876 35899998666799999 444 3333222
Q ss_pred cCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEec--C-----------CCCc
Q 017520 155 VNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD--G-----------FYFA 221 (370)
Q Consensus 155 ~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~--~-----------~~~p 221 (370)
..+.++..+|.+.+. +|+||+... ..+.|.++|++++++....+ + ...+
T Consensus 166 ~~g~~~~~lNELe~~-~G~lyan~w-----------------~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vl 227 (262)
T 3nol_A 166 AHGEELPELNELEWV-DGEIFANVW-----------------QTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVL 227 (262)
T ss_dssp ETTEECCCEEEEEEE-TTEEEEEET-----------------TSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCE
T ss_pred cCCccccccceeEEE-CCEEEEEEc-----------------cCCeEEEEECCCCcEEEEEECCcCccccccccCcCCce
Confidence 345666788888876 799999875 34689999999998865432 1 2367
Q ss_pred cceEEccCCCEEEEEeCCc--EEEEEe
Q 017520 222 NGVALSRDEDYVVVCESWK--CRKYWL 246 (370)
Q Consensus 222 ~gi~~~~dg~~l~v~~~~~--l~~~~~ 246 (370)
||||++++++.+||+.-.- ++.+.+
T Consensus 228 NGIA~dp~~~~lfVTGK~Wp~~~ev~~ 254 (262)
T 3nol_A 228 NGIAWDKEHHRLFVTGKLWPKVFEITL 254 (262)
T ss_dssp EEEEEETTTTEEEEEETTCSEEEEEEE
T ss_pred EEEEEcCCCCEEEEECCCCCceEEEEE
Confidence 9999999999999998654 666544
No 99
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.17 E-value=2.4e-08 Score=92.85 Aligned_cols=183 Identities=11% Similarity=0.030 Sum_probs=104.3
Q ss_pred cEEEEec--CCeEEEEe----CCeEEEEEe----cCCCceeceEEcCCCc-EEEEeCCCceEEEc-C-CC-eEEEEeecC
Q 017520 91 VIYTATR--DGWIKRLQ----DGTWVNWKF----IDSQTLVGLTSTKEGH-LIICDNANGLHKVS-E-DG-VENFLSYVN 156 (370)
Q Consensus 91 ~l~v~~~--~g~I~~~~----~g~~~~~~~----~~~~p~~gl~~d~~G~-L~v~~~~~gi~~~~-~-~g-~~~~~~~~~ 156 (370)
.+|+|+. .++|+.+. +|+++.+.. ....|. .+++++||+ ||+++.. .+..++ . +| ...+.....
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~-~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~ 81 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPIS-WMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPI 81 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCS-EEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEEC
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCc-EEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeec
Confidence 5888884 25687765 576665433 223678 899999997 8888765 777777 4 67 443322111
Q ss_pred CcccccccceEEcCCCc-EEEEeCCCCCCCccceecccccCCCceEEEEeCC-CCeEE-EEe----cCCCCccceEEccC
Q 017520 157 GSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPS-SNITT-LVA----DGFYFANGVALSRD 229 (370)
Q Consensus 157 g~~~~~~~~l~~d~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~-t~~~~-~~~----~~~~~p~gi~~~~d 229 (370)
+ ..+..+++++||+ +|+...+.. ....+...... ..+.+..|+.+ .++.. .+. .....+.+++++||
T Consensus 82 ~---g~~~~~~~spdg~~l~~~~~~~~-~~~~~~~~~~~--~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spd 155 (365)
T 1jof_A 82 G---GHPRANDADTNTRAIFLLAAKQP-PYAVYANPFYK--FAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPT 155 (365)
T ss_dssp C---SSGGGGCTTSCCEEEEEEECSST-TCCEEEEEESS--SCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTT
T ss_pred C---CCCccEEECCCCCEEEEEEecCC-cceeccceeec--CCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCC
Confidence 1 1367789999997 344221100 00000000000 12444444443 24332 221 23457899999999
Q ss_pred CCEEEEEeCCc--EEEEEeC-CCCCCceeeec-cCCCCCCCceeECCCCC-EEEEEe
Q 017520 230 EDYVVVCESWK--CRKYWLK-GERKGKLETFA-ENLPGAPDNINLAPDGT-FWIAII 281 (370)
Q Consensus 230 g~~l~v~~~~~--l~~~~~~-~~~~~~~~~~~-~~~~g~p~~i~~d~~G~-lwv~~~ 281 (370)
|+.+|+++.+. |++|+++ +.+......+. ......|..+++++||+ +|++..
T Consensus 156 G~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~ 212 (365)
T 1jof_A 156 ETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALME 212 (365)
T ss_dssp SSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEET
T ss_pred CCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEEC
Confidence 99999998754 9999987 33221111111 01134588899999996 677654
No 100
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=99.16 E-value=1.8e-09 Score=103.58 Aligned_cols=167 Identities=16% Similarity=0.245 Sum_probs=108.0
Q ss_pred ceEecCCCcCCCcceEEcCCCc--EEEEecCCeEEEEe-CCeE--EEE-------Eec-----CCCceeceEEcCC----
Q 017520 70 FIKVGEGSVNHPEDASMDKNGV--IYTATRDGWIKRLQ-DGTW--VNW-------KFI-----DSQTLVGLTSTKE---- 128 (370)
Q Consensus 70 ~~~~~~~~~~~P~~i~~d~~G~--l~v~~~~g~I~~~~-~g~~--~~~-------~~~-----~~~p~~gl~~d~~---- 128 (370)
+++++.+ |..|.+|+++++|. |||+...|+|++++ +|.. ..+ ... .+..+ ||+++++
T Consensus 6 v~~va~g-L~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gll-gia~~P~f~~n 83 (463)
T 2wg3_C 6 IQEVVSG-LRQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLL-SLAFHPNYKKN 83 (463)
T ss_dssp EEEEEEE-ESSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEE-EEEECTTHHHH
T ss_pred EEEeccC-CCCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcce-eeEeCCCCcCC
Confidence 4556665 78999999999985 99999999999998 5532 111 111 23456 8999975
Q ss_pred CcEEEEeCC-------------CceEEEc-CC--------C-eEEEEeecCCcccccccceEEcCCCcEEEEeCCCCCCC
Q 017520 129 GHLIICDNA-------------NGLHKVS-ED--------G-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLP 185 (370)
Q Consensus 129 G~L~v~~~~-------------~gi~~~~-~~--------g-~~~~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~ 185 (370)
+.|||+-.. ..|.++. .+ . .+.+.........+....|++++||+|||+........
T Consensus 84 ~~lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~~~~ 163 (463)
T 2wg3_C 84 GKLYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGMITL 163 (463)
T ss_dssp CEEEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTTCCH
T ss_pred CEEEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCCCCC
Confidence 889997431 2566665 21 1 23343322222345677899999999999975411100
Q ss_pred ccceecccccCCCceEEEEeCCCC--------------------eEEEEecCCCCccceEEccC-----CC-EEEEEeC
Q 017520 186 HEYCLDILEGKPHGQLLKYDPSSN--------------------ITTLVADGFYFANGVALSRD-----ED-YVVVCES 238 (370)
Q Consensus 186 ~~~~~~~~~~~~~g~l~~~d~~t~--------------------~~~~~~~~~~~p~gi~~~~d-----g~-~l~v~~~ 238 (370)
......-......|.|+|+|+++. ..++++.++++|.|++|+++ |+ ++|.++.
T Consensus 164 ~~~~~~q~~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~RNp~gla~dp~tg~~~G~l~~~~~D~ 242 (463)
T 2wg3_C 164 DDMEEMDGLSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLHDPGRCAVDRHPTDININLTILCSDS 242 (463)
T ss_dssp HHHHHCTTCCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCSSCCBEEEESSCSSTTCSEEEEEECC
T ss_pred CccccccCcCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCCCcceEEECCCCCCcccceEEEeccc
Confidence 000000001234689999999863 34678889999999999997 33 5777775
No 101
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=99.14 E-value=3.5e-09 Score=98.41 Aligned_cols=163 Identities=13% Similarity=0.086 Sum_probs=104.9
Q ss_pred eEEEEEecCCCceeceEEcCCCc-EEEEeCCCceEEEcCCC-eE-EEEee--cCCcccccccceEEcC----CCcEEEEe
Q 017520 108 TWVNWKFIDSQTLVGLTSTKEGH-LIICDNANGLHKVSEDG-VE-NFLSY--VNGSKLRFANDVVEAS----DGSLYFTV 178 (370)
Q Consensus 108 ~~~~~~~~~~~p~~gl~~d~~G~-L~v~~~~~gi~~~~~~g-~~-~~~~~--~~g~~~~~~~~l~~d~----~G~l~v~d 178 (370)
+++.+......|. +|+++++|+ |||++..+.|++++.+| .. .+... ........+.+|+++| +|.||+++
T Consensus 9 ~~~~va~~l~~P~-~i~~~pdG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~ 87 (353)
T 2g8s_A 9 NVEVLQDKLDHPW-ALAFLPDNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSY 87 (353)
T ss_dssp EEEEEEEEESSEE-EEEECSTTCCEEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEE
T ss_pred EEEEEECCCCCcE-EEEEcCCCCEEEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEE
Confidence 5666666677899 999999999 99999777788888666 33 22211 0011124568999998 58999996
Q ss_pred CCCCCCCccceecccccCCCceEEEEeCCCC-----eEEEEecC-------CCCccceEEccCCCEEEEEeCC-------
Q 017520 179 SSSKYLPHEYCLDILEGKPHGQLLKYDPSSN-----ITTLVADG-------FYFANGVALSRDEDYVVVCESW------- 239 (370)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~-----~~~~~~~~-------~~~p~gi~~~~dg~~l~v~~~~------- 239 (370)
..... ......+|.+++.+.+ ..+++... ...++++++++||. ||++.-.
T Consensus 88 ~~~~~----------~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~-Lyv~~Gd~~~~~~~ 156 (353)
T 2g8s_A 88 SEVGD----------DGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGY-LFIALGENNQRPTA 156 (353)
T ss_dssp EEECS----------SSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSE-EEEEECCTTCGGGG
T ss_pred eCCCC----------CCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCc-EEEEECCCCCCCcc
Confidence 52000 0001347888876432 22333322 34578999999995 9999521
Q ss_pred -------c-EEEEEeCCCCC----------CceeeeccCCCCCCCceeECC-CCCEEEEEecC
Q 017520 240 -------K-CRKYWLKGERK----------GKLETFAENLPGAPDNINLAP-DGTFWIAIIKL 283 (370)
Q Consensus 240 -------~-l~~~~~~~~~~----------~~~~~~~~~~~g~p~~i~~d~-~G~lwv~~~~~ 283 (370)
+ |+|+++++... ...+.+...+ ..|.++++|+ +|++|++..+.
T Consensus 157 q~~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~-rnp~gl~~d~~~g~l~~~d~g~ 218 (353)
T 2g8s_A 157 QDLDKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIWSYGI-RNPQGMAMNPWSNALWLNEHGP 218 (353)
T ss_dssp GCTTSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEEEECC-SEEEEEEEETTTTEEEEEEECS
T ss_pred CCCCCCCeEEEEECCCCCCCCCCCCcCCCCCCccEEEEcC-cCccceEEECCCCCEEEEecCC
Confidence 2 99999876410 0122332111 2488999999 89999998874
No 102
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.14 E-value=4.3e-09 Score=92.39 Aligned_cols=145 Identities=17% Similarity=0.191 Sum_probs=104.9
Q ss_pred CCcceEEcCCCcEEEEe-cCCeEEEEe--CCeEEEEEecCCCceeceEEcCCCcEEEEeCCCceEEEc-CCC--eEEEEe
Q 017520 80 HPEDASMDKNGVIYTAT-RDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGHLIICDNANGLHKVS-EDG--VENFLS 153 (370)
Q Consensus 80 ~P~~i~~d~~G~l~v~~-~~g~I~~~~--~g~~~~~~~~~~~p~~gl~~d~~G~L~v~~~~~gi~~~~-~~g--~~~~~~ 153 (370)
..|+++++. +.||+.+ .++.++.+| +++...-....+.+. |++.| .+.||+++....|..+| ++. ...+.-
T Consensus 97 FgeGit~~g-~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~eGw-GLt~D-g~~L~vSdGs~~l~~iDp~T~~v~~~I~V 173 (268)
T 3nok_A 97 FAEGLASDG-ERLYQLTWTEGLLFTWSGMPPQRERTTRYSGEGW-GLCYW-NGKLVRSDGGTMLTFHEPDGFALVGAVQV 173 (268)
T ss_dssp CEEEEEECS-SCEEEEESSSCEEEEEETTTTEEEEEEECSSCCC-CEEEE-TTEEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred ceeEEEEeC-CEEEEEEccCCEEEEEECCcCcEEEEEeCCCcee-EEecC-CCEEEEECCCCEEEEEcCCCCeEEEEEEe
Confidence 347788874 5899999 678899999 666544444456678 88876 35899998666799999 454 333322
Q ss_pred ecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEec--------------CCC
Q 017520 154 YVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD--------------GFY 219 (370)
Q Consensus 154 ~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~--------------~~~ 219 (370)
...+.+..++|.|.+. +|+||+... ..+.|.++|++++++....+ ...
T Consensus 174 ~~~g~~v~~lNeLe~~-dG~lyanvw-----------------~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~ 235 (268)
T 3nok_A 174 KLRGQPVELINELECA-NGVIYANIW-----------------HSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEA 235 (268)
T ss_dssp EETTEECCCEEEEEEE-TTEEEEEET-----------------TCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTC
T ss_pred CCCCcccccccccEEe-CCEEEEEEC-----------------CCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCC
Confidence 2355566788888886 889999875 34689999999998765432 123
Q ss_pred CccceEEccCCCEEEEEeCCc--EEEEE
Q 017520 220 FANGVALSRDEDYVVVCESWK--CRKYW 245 (370)
Q Consensus 220 ~p~gi~~~~dg~~l~v~~~~~--l~~~~ 245 (370)
.+||||++++++.+||+.-.- ++.+.
T Consensus 236 vlNGIA~dp~~~rlfVTGK~Wp~~~ev~ 263 (268)
T 3nok_A 236 VLNGIAVEPGSGRIFMTGKLWPRLFEVR 263 (268)
T ss_dssp CEEEEEECTTTCCEEEEETTCSEEEEEE
T ss_pred ceEEEEEcCCCCEEEEeCCCCCceEEEE
Confidence 679999999998899998644 55554
No 103
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.14 E-value=1.1e-08 Score=89.00 Aligned_cols=146 Identities=18% Similarity=0.116 Sum_probs=106.2
Q ss_pred CCcceEEcCCCcEEEEe-cCCeEEEEe--CCeEEEEEecCCCceeceEEcCCCcEEEEeCCCceEEEc-CCC--eEEEEe
Q 017520 80 HPEDASMDKNGVIYTAT-RDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGHLIICDNANGLHKVS-EDG--VENFLS 153 (370)
Q Consensus 80 ~P~~i~~d~~G~l~v~~-~~g~I~~~~--~g~~~~~~~~~~~p~~gl~~d~~G~L~v~~~~~gi~~~~-~~g--~~~~~~ 153 (370)
..|+++++ +++||+.+ .++.++.+| +.+...-....+.+. |++.| .+.||+++....|..+| .+. ...+.-
T Consensus 66 fgeGi~~~-~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~~Gw-glt~d-g~~L~vSdgs~~l~~iDp~t~~~~~~I~V 142 (243)
T 3mbr_X 66 FGAGIVAW-RDRLIQLTWRNHEGFVYDLATLTPRARFRYPGEGW-ALTSD-DSHLYMSDGTAVIRKLDPDTLQQVGSIKV 142 (243)
T ss_dssp CEEEEEEE-TTEEEEEESSSSEEEEEETTTTEEEEEEECSSCCC-EEEEC-SSCEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred ceeEEEEe-CCEEEEEEeeCCEEEEEECCcCcEEEEEeCCCCce-EEeeC-CCEEEEECCCCeEEEEeCCCCeEEEEEEE
Confidence 45788887 47899998 678899999 666544444456677 88876 45899999767899999 454 333322
Q ss_pred ecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEec--------------CCC
Q 017520 154 YVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD--------------GFY 219 (370)
Q Consensus 154 ~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~--------------~~~ 219 (370)
...+.++..+|.|... +|+||+... ....|.++|++++++....+ ...
T Consensus 143 ~~~g~~~~~lNeLe~~-~G~lyanvw-----------------~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~ 204 (243)
T 3mbr_X 143 TAGGRPLDNLNELEWV-NGELLANVW-----------------LTSRIARIDPASGKVVAWIDLQALVPDADALTDSTND 204 (243)
T ss_dssp EETTEECCCEEEEEEE-TTEEEEEET-----------------TTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSS
T ss_pred ccCCcccccceeeEEe-CCEEEEEEC-----------------CCCeEEEEECCCCCEEEEEECCcCccccccccCCcCC
Confidence 2355566788888875 889998875 24689999999998865432 123
Q ss_pred CccceEEccCCCEEEEEeCCc--EEEEEe
Q 017520 220 FANGVALSRDEDYVVVCESWK--CRKYWL 246 (370)
Q Consensus 220 ~p~gi~~~~dg~~l~v~~~~~--l~~~~~ 246 (370)
.+||||++++++.+||+.-.- ++.+.+
T Consensus 205 vlNGIA~d~~~~~lfVTGK~wp~~~~v~~ 233 (243)
T 3mbr_X 205 VLNGIAFDAEHDRLFVTGKRWPMLYEIRL 233 (243)
T ss_dssp CEEEEEEETTTTEEEEEETTCSEEEEEEE
T ss_pred ceEEEEEcCCCCEEEEECCCCCcEEEEEE
Confidence 579999999999999998654 666654
No 104
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.14 E-value=3e-08 Score=90.56 Aligned_cols=216 Identities=18% Similarity=0.092 Sum_probs=123.6
Q ss_pred CCcceEEcCCCc-EEEEe-cCCeEEEEe--CCeEEEEEecCC-------CceeceEEcCCCc-EEEEeCC----------
Q 017520 80 HPEDASMDKNGV-IYTAT-RDGWIKRLQ--DGTWVNWKFIDS-------QTLVGLTSTKEGH-LIICDNA---------- 137 (370)
Q Consensus 80 ~P~~i~~d~~G~-l~v~~-~~g~I~~~~--~g~~~~~~~~~~-------~p~~gl~~d~~G~-L~v~~~~---------- 137 (370)
.|.+++++++|+ +|++. .++.|+.++ +++......... .+. ++++++||+ ||++...
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~-~~~~spdg~~l~~~~~~~~~~~~~~~~ 122 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMY-SFAISPDGKEVYATVNPTQRLNDHYVV 122 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSS-CEEECTTSSEEEEEEEEEEECSSCEEE
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEccccccccccccc-ceEECCCCCEEEEEccccccccccccc
Confidence 699999999986 78776 678999999 566543333222 267 999999996 7777633
Q ss_pred --CceEEEc-CCC-eEEEEeecCCcccccccceEEcCCCcEEEEeCC-CCCCCccc-eecccccC---------------
Q 017520 138 --NGLHKVS-EDG-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSS-SKYLPHEY-CLDILEGK--------------- 196 (370)
Q Consensus 138 --~gi~~~~-~~g-~~~~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~-~~~~~~~~-~~~~~~~~--------------- 196 (370)
..|..++ .++ .......... ...+..++++++|++|+++.. ..++.... ....+...
T Consensus 123 ~~~~i~~~d~~~~~~~~~~~~~~~--~~~~~~~~~s~dg~l~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (349)
T 1jmx_B 123 KPPRLEVFSTADGLEAKPVRTFPM--PRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYF 200 (349)
T ss_dssp CCCEEEEEEGGGGGGBCCSEEEEC--CSSCCCEEECTTSCEEEESSSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCC
T ss_pred CCCeEEEEECCCccccceeeeccC--CCcccceeECCCCcEEEccCcEEEEeCCCCceeccccccccCCccccCccceee
Confidence 4677777 554 2111011011 124678889999998886321 00010000 00000000
Q ss_pred ------------------------------CCceEEEEeCCCCeEEEEe--cCCCCccceEEcc-CCCEEEEEeCCcEEE
Q 017520 197 ------------------------------PHGQLLKYDPSSNITTLVA--DGFYFANGVALSR-DEDYVVVCESWKCRK 243 (370)
Q Consensus 197 ------------------------------~~g~l~~~d~~t~~~~~~~--~~~~~p~gi~~~~-dg~~l~v~~~~~l~~ 243 (370)
....++.+|..+++++.+. .....+.++++++ |++.+|++ .+.|.+
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~-~~~v~~ 279 (349)
T 1jmx_B 201 WPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV-LNRLAK 279 (349)
T ss_dssp CCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE-ESEEEE
T ss_pred ecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE-cCeEEE
Confidence 0001112344333333221 1122466788889 99999988 333999
Q ss_pred EEeCCCCCCceeeeccCCCCCCCceeECCCCC-EEEEEecCchhHHHhhhcchhHHHHHHhCCccccccccCCCceEEEE
Q 017520 244 YWLKGERKGKLETFAENLPGAPDNINLAPDGT-FWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIH 322 (370)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~-lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~ 322 (370)
||+++.+. ...+ ..+..|.+++++++|+ +|++... +.+..
T Consensus 280 ~d~~~~~~--~~~~--~~~~~~~~~~~s~dg~~l~~~~~~-----------------------------------~~v~v 320 (349)
T 1jmx_B 280 YDLKQRKL--IKAA--NLDHTYYCVAFDKKGDKLYLGGTF-----------------------------------NDLAV 320 (349)
T ss_dssp EETTTTEE--EEEE--ECSSCCCEEEECSSSSCEEEESBS-----------------------------------SEEEE
T ss_pred EECccCeE--EEEE--cCCCCccceEECCCCCEEEEecCC-----------------------------------CeEEE
Confidence 99765321 1222 1234578899999985 7775322 35777
Q ss_pred ECC-CCcEEEEEeCCCC
Q 017520 323 VAE-DGTIIRNLVDPTG 338 (370)
Q Consensus 323 ~~~-~g~~~~~~~~~~g 338 (370)
+|. .++.+..+..+.|
T Consensus 321 ~d~~~~~~~~~~~~~~~ 337 (349)
T 1jmx_B 321 FNPDTLEKVKNIKLPGG 337 (349)
T ss_dssp EETTTTEEEEEEECSSS
T ss_pred EeccccceeeeeecCCC
Confidence 885 5788888876633
No 105
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.12 E-value=1.4e-08 Score=94.01 Aligned_cols=183 Identities=16% Similarity=0.188 Sum_probs=113.5
Q ss_pred CCCcceEEcCCCcEEEEe-cCCeEEEEe---CCeEEE----EEec----------CCCceeceEEcCCCc-EEEEeCC-C
Q 017520 79 NHPEDASMDKNGVIYTAT-RDGWIKRLQ---DGTWVN----WKFI----------DSQTLVGLTSTKEGH-LIICDNA-N 138 (370)
Q Consensus 79 ~~P~~i~~d~~G~l~v~~-~~g~I~~~~---~g~~~~----~~~~----------~~~p~~gl~~d~~G~-L~v~~~~-~ 138 (370)
..|..+++ ....||+++ .++.|..++ ++.+.. .... ...++ +++++++|+ ||+++.. .
T Consensus 100 ~~p~~~~~-dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~spdg~~l~~~~~~~~ 177 (361)
T 3scy_A 100 ADPCYLTT-NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLH-CVRITPDGKYLLADDLGTD 177 (361)
T ss_dssp SCEEEEEE-CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEE-EEEECTTSSEEEEEETTTT
T ss_pred CCcEEEEE-CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcce-EEEECCCCCEEEEEeCCCC
Confidence 47888888 344688887 577888888 343221 1111 11246 799999997 8888865 3
Q ss_pred ceEEEc--C-CC------eEEE--EeecCCcccccccceEEcCCCc-EEEEeCCCCCCCccceecccccCCCceEEEEeC
Q 017520 139 GLHKVS--E-DG------VENF--LSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDP 206 (370)
Q Consensus 139 gi~~~~--~-~g------~~~~--~~~~~g~~~~~~~~l~~d~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~ 206 (370)
.+..++ . .+ +... ...........++.+++++||+ +|+++. ..+.|..|+.
T Consensus 178 ~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~-----------------~~~~v~v~~~ 240 (361)
T 3scy_A 178 QIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINE-----------------IGGTVIAFRY 240 (361)
T ss_dssp EEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEET-----------------TTCEEEEEEE
T ss_pred EEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcC-----------------CCCeEEEEEe
Confidence 455554 2 22 1111 0000111124678899999996 888864 2467888887
Q ss_pred CCCeEEEEec------CCCCccceEEccCCCEEEEEeCC--c-EEEEEeCC--CCCCceeeeccCCCCCCCceeECCCCC
Q 017520 207 SSNITTLVAD------GFYFANGVALSRDEDYVVVCESW--K-CRKYWLKG--ERKGKLETFAENLPGAPDNINLAPDGT 275 (370)
Q Consensus 207 ~t~~~~~~~~------~~~~p~gi~~~~dg~~l~v~~~~--~-l~~~~~~~--~~~~~~~~~~~~~~g~p~~i~~d~~G~ 275 (370)
++++.+.+.. ....|.++++++||+.+|+++.. + |..|+++. .+......+. . ...|.++++++||+
T Consensus 241 ~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~-~-g~~~~~~~~spdg~ 318 (361)
T 3scy_A 241 ADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQL-T-GIHPRNFIITPNGK 318 (361)
T ss_dssp ETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEE-C-SSCCCEEEECTTSC
T ss_pred cCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEec-C-CCCCceEEECCCCC
Confidence 6676543321 23446799999999999999887 4 88888752 2211111221 2 34689999999997
Q ss_pred -EEEEEec
Q 017520 276 -FWIAIIK 282 (370)
Q Consensus 276 -lwv~~~~ 282 (370)
+|++...
T Consensus 319 ~l~~~~~~ 326 (361)
T 3scy_A 319 YLLVACRD 326 (361)
T ss_dssp EEEEEETT
T ss_pred EEEEEECC
Confidence 7776533
No 106
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.10 E-value=3e-08 Score=97.56 Aligned_cols=232 Identities=16% Similarity=0.116 Sum_probs=143.6
Q ss_pred CCcceEEcCCC-cEEEEecCCeEEEEe-C---CeEEEEEecCCCceeceEEcC----CCc-EEEEeCC-CceEEEc-CCC
Q 017520 80 HPEDASMDKNG-VIYTATRDGWIKRLQ-D---GTWVNWKFIDSQTLVGLTSTK----EGH-LIICDNA-NGLHKVS-EDG 147 (370)
Q Consensus 80 ~P~~i~~d~~G-~l~v~~~~g~I~~~~-~---g~~~~~~~~~~~p~~gl~~d~----~G~-L~v~~~~-~gi~~~~-~~g 147 (370)
.|.+++++++| .||+++.++.|..|+ + ++...-......|. ++++++ ||+ ||+++.. ..|..+| .++
T Consensus 180 ~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~~p~-~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~ 258 (543)
T 1nir_A 180 AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEAR-SVESSKFKGYEDRYTIAGAYWPPQFAIMDGETL 258 (543)
T ss_dssp TEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEE-EEEECCSTTCTTTEEEEEEEESSEEEEEETTTC
T ss_pred ccceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecCCCcc-eEEeCCCcCCCCCEEEEEEccCCeEEEEecccc
Confidence 38899999988 688999889999999 2 33333333556788 999999 895 7888753 5677777 555
Q ss_pred --eEEEEee---cCC---cccccccceEEcCCCc-EEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEE--Eec
Q 017520 148 --VENFLSY---VNG---SKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTL--VAD 216 (370)
Q Consensus 148 --~~~~~~~---~~g---~~~~~~~~l~~d~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~--~~~ 216 (370)
++.+... ..+ .+...+..+++++++. +|++.. ..+.|+.+|..+.+... ...
T Consensus 259 ~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~-----------------~~g~i~vvd~~~~~~l~~~~i~ 321 (543)
T 1nir_A 259 EPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVK-----------------ETGKVLLVNYKDIDNLTVTSIG 321 (543)
T ss_dssp CEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEET-----------------TTTEEEEEECTTSSSCEEEEEE
T ss_pred ccceeecccCcccCccccccCCceEEEEECCCCCEEEEEEC-----------------CCCeEEEEEecCCCcceeEEec
Confidence 3333211 011 0112566789999775 555543 45789999987543211 123
Q ss_pred CCCCccceEEccCCCEEEEEeCCc--EEEEEeCCCCCCceeeec-cCCCCCC-Ccee-ECCC-CCEEEEEecCchhHHHh
Q 017520 217 GFYFANGVALSRDEDYVVVCESWK--CRKYWLKGERKGKLETFA-ENLPGAP-DNIN-LAPD-GTFWIAIIKLDARRMKI 290 (370)
Q Consensus 217 ~~~~p~gi~~~~dg~~l~v~~~~~--l~~~~~~~~~~~~~~~~~-~~~~g~p-~~i~-~d~~-G~lwv~~~~~~~~~~~~ 290 (370)
...+|.++++++||+++|++.... |.++|.++.+. ...+. ...| .| .+.. .+++ |.+|++...+
T Consensus 322 ~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l--~~~i~~g~~p-h~g~g~~~~~p~~g~~~~s~~~~------- 391 (543)
T 1nir_A 322 AAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRL--SALVDVGKTP-HPGRGANFVHPKYGPVWSTSHLG------- 391 (543)
T ss_dssp CCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEE--EEEEECSSSB-CCTTCEEEEETTTEEEEEEEBSS-------
T ss_pred cCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeE--EEeeccCCCC-CCCCCcccCCCCCccEEEeccCC-------
Confidence 346789999999999999987644 88899765432 11111 1111 12 2333 3565 7889886532
Q ss_pred hhcchhHHHHHHhCCccccccccCCCceEEEEECCC--------CcEEEEEeCCCCCccccceeEEE--ECCEEEEEeC-
Q 017520 291 LNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAED--------GTIIRNLVDPTGQLMSFVTSGLQ--VDNHLYVISL- 359 (370)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~--------g~~~~~~~~~~g~~~~~~t~~~~--~~g~L~~gs~- 359 (370)
.+.|..++.+ ++.++.+....+. ...+.. .+.+||+++.
T Consensus 392 --------------------------d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~----~~~v~~~pdg~~l~v~~~~ 441 (543)
T 1nir_A 392 --------------------------DGSISLIGTDPKNHPQYAWKKVAELQGQGGG----SLFIKTHPKSSHLYVDTTF 441 (543)
T ss_dssp --------------------------SSEEEEEECCTTTCTTTBTSEEEEEECSCSC----CCCEECCTTCCEEEECCTT
T ss_pred --------------------------CceEEEEEeCCCCCchhcCeEEEEEEcCCCC----ceEEEcCCCCCcEEEecCC
Confidence 1234555432 6788888765432 122222 3468999874
Q ss_pred C-----CCeEEEEeC
Q 017520 360 T-----SNFIGKVQL 369 (370)
Q Consensus 360 ~-----~~~i~~~~~ 369 (370)
+ .+.|+++++
T Consensus 442 ~~~~~~~~~v~v~d~ 456 (543)
T 1nir_A 442 NPDARISQSVAVFDL 456 (543)
T ss_dssp CSSHHHHTCEEEEET
T ss_pred CCCcccCceEEEEEC
Confidence 2 348888875
No 107
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.10 E-value=2.6e-08 Score=87.34 Aligned_cols=190 Identities=11% Similarity=0.109 Sum_probs=123.7
Q ss_pred eeceEEcCCCcEEEEeCCC---ceEEEc-CCC-eEEEEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccc
Q 017520 120 LVGLTSTKEGHLIICDNAN---GLHKVS-EDG-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILE 194 (370)
Q Consensus 120 ~~gl~~d~~G~L~v~~~~~---gi~~~~-~~g-~~~~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~ 194 (370)
. ||.++ ++.||++.... .|.++| ++| +..-.. .+. ..+..+++++ +++||+.+.
T Consensus 46 q-GL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~-l~~--~~FgeGit~~-g~~ly~ltw--------------- 104 (262)
T 3nol_A 46 E-GFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIE-LGK--RYFGEGISDW-KDKIVGLTW--------------- 104 (262)
T ss_dssp E-EEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEE-CCT--TCCEEEEEEE-TTEEEEEES---------------
T ss_pred c-eEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEe-cCC--ccceeEEEEe-CCEEEEEEe---------------
Confidence 5 99998 78999987553 588899 677 332222 122 1244556765 358999975
Q ss_pred cCCCceEEEEeCCCCeEEEEecCCCCccceEEccCCCEEEEEeCCc-EEEEEeCCCCCCc-eeeeccCCC-CCCCceeEC
Q 017520 195 GKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWK-CRKYWLKGERKGK-LETFAENLP-GAPDNINLA 271 (370)
Q Consensus 195 ~~~~g~l~~~d~~t~~~~~~~~~~~~p~gi~~~~dg~~l~v~~~~~-l~~~~~~~~~~~~-~~~~~~~~~-g~p~~i~~d 271 (370)
.++.+++||+++.+...-..- .+.|..+++|++.||+++..+ |+.+|+.+.+... ...-.+..+ ..++.+...
T Consensus 105 --~~~~v~v~D~~t~~~~~ti~~--~~eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~ 180 (262)
T 3nol_A 105 --KNGLGFVWNIRNLRQVRSFNY--DGEGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV 180 (262)
T ss_dssp --SSSEEEEEETTTCCEEEEEEC--SSCCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE
T ss_pred --eCCEEEEEECccCcEEEEEEC--CCCceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE
Confidence 357899999988766433322 236666778888899998655 9999976543211 111111111 223346665
Q ss_pred CCCCEEEEEecCchhHHHhhhcchhHHHHHHhCCccccccccCCCceEEEEECC-CCcEEEEEeCCCCC--------ccc
Q 017520 272 PDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAE-DGTIIRNLVDPTGQ--------LMS 342 (370)
Q Consensus 272 ~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~-~g~~~~~~~~~~g~--------~~~ 342 (370)
+|.+|+..+.. ..|.++|+ .|+++..+....-. ..+
T Consensus 181 -~G~lyan~w~~----------------------------------~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~ 225 (262)
T 3nol_A 181 -DGEIFANVWQT----------------------------------NKIVRIDPETGKVTGIIDLNGILAEAGPLPSPID 225 (262)
T ss_dssp -TTEEEEEETTS----------------------------------SEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCC
T ss_pred -CCEEEEEEccC----------------------------------CeEEEEECCCCcEEEEEECCcCccccccccCcCC
Confidence 78999998765 36999997 68999988663211 012
Q ss_pred cceeEEEE--CCEEEEEeCCCCeEEEEeC
Q 017520 343 FVTSGLQV--DNHLYVISLTSNFIGKVQL 369 (370)
Q Consensus 343 ~~t~~~~~--~g~L~~gs~~~~~i~~~~~ 369 (370)
....++.+ .++||+.+..=+.+-.+++
T Consensus 226 vlNGIA~dp~~~~lfVTGK~Wp~~~ev~~ 254 (262)
T 3nol_A 226 VLNGIAWDKEHHRLFVTGKLWPKVFEITL 254 (262)
T ss_dssp CEEEEEEETTTTEEEEEETTCSEEEEEEE
T ss_pred ceEEEEEcCCCCEEEEECCCCCceEEEEE
Confidence 33455555 3899999999998888765
No 108
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.09 E-value=3.8e-07 Score=82.54 Aligned_cols=176 Identities=10% Similarity=0.068 Sum_probs=116.9
Q ss_pred CCcceEEcCCCc-EEEEecCCeEEEEe--CCeE---EEEEecCCCceeceEEcCCCcEEE-EeCCCceEEEc-CCC--eE
Q 017520 80 HPEDASMDKNGV-IYTATRDGWIKRLQ--DGTW---VNWKFIDSQTLVGLTSTKEGHLII-CDNANGLHKVS-EDG--VE 149 (370)
Q Consensus 80 ~P~~i~~d~~G~-l~v~~~~g~I~~~~--~g~~---~~~~~~~~~p~~gl~~d~~G~L~v-~~~~~gi~~~~-~~g--~~ 149 (370)
...++++.++|. +++++.+|.|..++ +++. ..+........ +++++++|++++ +...+.+..++ +++ ..
T Consensus 99 ~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~ 177 (337)
T 1gxr_A 99 YIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACY-ALAISPDSKVCFSCCSDGNIAVWDLHNQTLVR 177 (337)
T ss_dssp BEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEE-EEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred cEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceE-EEEECCCCCEEEEEeCCCcEEEEeCCCCceee
Confidence 356788888885 66677889999999 4442 22233344456 899999987544 55445577777 555 33
Q ss_pred EEEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecCCCCccceEEccC
Q 017520 150 NFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRD 229 (370)
Q Consensus 150 ~~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~p~gi~~~~d 229 (370)
.+ . + ....+..++++++|+..++.. .++.|..||..+++.............++++++
T Consensus 178 ~~-~---~-~~~~i~~~~~~~~~~~l~~~~-----------------~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~ 235 (337)
T 1gxr_A 178 QF-Q---G-HTDGASCIDISNDGTKLWTGG-----------------LDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPT 235 (337)
T ss_dssp EE-C---C-CSSCEEEEEECTTSSEEEEEE-----------------TTSEEEEEETTTTEEEEEEECSSCEEEEEECTT
T ss_pred ee-e---c-ccCceEEEEECCCCCEEEEEe-----------------cCCcEEEEECCCCceEeeecCCCceEEEEECCC
Confidence 22 1 1 113577899999997666543 357899999987766544444445678999999
Q ss_pred CCEEEEEeCCc-EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCCEEEEEec
Q 017520 230 EDYVVVCESWK-CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 282 (370)
Q Consensus 230 g~~l~v~~~~~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~ 282 (370)
++.++++...+ |..|++...+ ...+. ...+....++++++|++.++...
T Consensus 236 ~~~l~~~~~~~~i~~~~~~~~~---~~~~~-~~~~~v~~~~~~~~~~~l~~~~~ 285 (337)
T 1gxr_A 236 GEWLAVGMESSNVEVLHVNKPD---KYQLH-LHESCVLSLKFAYCGKWFVSTGK 285 (337)
T ss_dssp SSEEEEEETTSCEEEEETTSSC---EEEEC-CCSSCEEEEEECTTSSEEEEEET
T ss_pred CCEEEEEcCCCcEEEEECCCCC---eEEEc-CCccceeEEEECCCCCEEEEecC
Confidence 99888888777 9999986542 22222 23344667889999986665543
No 109
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.08 E-value=3.5e-08 Score=90.10 Aligned_cols=158 Identities=11% Similarity=0.050 Sum_probs=97.3
Q ss_pred ceEEcCCCcEEEEe-cCCeEEEEe--CCeEEEEEecCC--CceeceEEcCCCc-EEEEeCC-CceEEEc-CCC-eEEEEe
Q 017520 83 DASMDKNGVIYTAT-RDGWIKRLQ--DGTWVNWKFIDS--QTLVGLTSTKEGH-LIICDNA-NGLHKVS-EDG-VENFLS 153 (370)
Q Consensus 83 ~i~~d~~G~l~v~~-~~g~I~~~~--~g~~~~~~~~~~--~p~~gl~~d~~G~-L~v~~~~-~gi~~~~-~~g-~~~~~~ 153 (370)
++++.+++.+|++. .++.|+.++ +++......... .|. +++++++|+ +|++... ..|+.++ .++ ......
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~-~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~ 82 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPG-TAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHAN 82 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSC-EEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCc-eeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEE
Confidence 44667788888876 788999999 666544433333 688 999999996 7888754 4588888 566 332222
Q ss_pred ecC--CcccccccceEEcCCCc-EEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEE---EEecCCCCccceEEc
Q 017520 154 YVN--GSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITT---LVADGFYFANGVALS 227 (370)
Q Consensus 154 ~~~--g~~~~~~~~l~~d~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~---~~~~~~~~p~gi~~~ 227 (370)
... +.....++.+++++||+ +|++..........+ ....+.|+.+|.++++.. ........+.+++++
T Consensus 83 ~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~------~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s 156 (349)
T 1jmx_B 83 LSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHY------VVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAA 156 (349)
T ss_dssp SCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCE------EECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEEC
T ss_pred cccccccccccccceEECCCCCEEEEEccccccccccc------ccCCCeEEEEECCCccccceeeeccCCCcccceeEC
Confidence 111 11123578999999995 676652100000000 001368999998763321 112223357788899
Q ss_pred cCCCEEEEEeCCcEEEEEeCCC
Q 017520 228 RDEDYVVVCESWKCRKYWLKGE 249 (370)
Q Consensus 228 ~dg~~l~v~~~~~l~~~~~~~~ 249 (370)
+||+ +|++.. .|+++|+++.
T Consensus 157 ~dg~-l~~~~~-~i~~~d~~~~ 176 (349)
T 1jmx_B 157 DDGS-LYVAGP-DIYKMDVKTG 176 (349)
T ss_dssp TTSC-EEEESS-SEEEECTTTC
T ss_pred CCCc-EEEccC-cEEEEeCCCC
Confidence 9999 888532 2888887543
No 110
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.06 E-value=8.8e-07 Score=79.89 Aligned_cols=181 Identities=14% Similarity=0.169 Sum_probs=116.1
Q ss_pred CCcCCCcceEEcCCCc-EEEEecCCeEEEEe--CCeEEE-EEecCCCceeceEEcCCCcEEEEeCCCc-eEEEc-CCC--
Q 017520 76 GSVNHPEDASMDKNGV-IYTATRDGWIKRLQ--DGTWVN-WKFIDSQTLVGLTSTKEGHLIICDNANG-LHKVS-EDG-- 147 (370)
Q Consensus 76 ~~~~~P~~i~~d~~G~-l~v~~~~g~I~~~~--~g~~~~-~~~~~~~p~~gl~~d~~G~L~v~~~~~g-i~~~~-~~g-- 147 (370)
+.-....++++.++|. |.+++.+|.|..++ +++... +........ +++++++|+++++....+ |..++ .++
T Consensus 21 gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~ 99 (312)
T 4ery_A 21 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGIS-DVAWSSDSNLLVSASDDKTLKIWDVSSGKC 99 (312)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEE-EEEECTTSSEEEEEETTSEEEEEETTTCCE
T ss_pred ccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceE-EEEEcCCCCEEEEECCCCEEEEEECCCCcE
Confidence 3334567889999886 44566899999999 665443 333344566 899999998666544444 55556 555
Q ss_pred eEEEEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecC-CCCccceEE
Q 017520 148 VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG-FYFANGVAL 226 (370)
Q Consensus 148 ~~~~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~-~~~p~gi~~ 226 (370)
...+... ...+..+++.+++++.++.+ .++.|..||..+++....... ......+++
T Consensus 100 ~~~~~~~-----~~~v~~~~~~~~~~~l~s~~-----------------~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~ 157 (312)
T 4ery_A 100 LKTLKGH-----SNYVFCCNFNPQSNLIVSGS-----------------FDESVRIWDVKTGKCLKTLPAHSDPVSAVHF 157 (312)
T ss_dssp EEEEECC-----SSCEEEEEECSSSSEEEEEE-----------------TTSCEEEEETTTCCEEEEECCCSSCEEEEEE
T ss_pred EEEEcCC-----CCCEEEEEEcCCCCEEEEEe-----------------CCCcEEEEECCCCEEEEEecCCCCcEEEEEE
Confidence 3333211 13567889999998777643 357899999887765443333 234567899
Q ss_pred ccCCCEEEEEeCCc-EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCCEEEEEe
Q 017520 227 SRDEDYVVVCESWK-CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAII 281 (370)
Q Consensus 227 ~~dg~~l~v~~~~~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~ 281 (370)
+++++.++.+...+ |..||+...+ ....+..........++++++|++.++..
T Consensus 158 ~~~~~~l~~~~~d~~i~~wd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 211 (312)
T 4ery_A 158 NRDGSLIVSSSYDGLCRIWDTASGQ--CLKTLIDDDNPPVSFVKFSPNGKYILAAT 211 (312)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTCC--EEEEECCSSCCCEEEEEECTTSSEEEEEE
T ss_pred cCCCCEEEEEeCCCcEEEEECCCCc--eeeEEeccCCCceEEEEECCCCCEEEEEc
Confidence 99999888777777 8899876432 12222212222234478899998666544
No 111
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.05 E-value=3.8e-08 Score=89.31 Aligned_cols=149 Identities=11% Similarity=0.007 Sum_probs=97.3
Q ss_pred EEEEecCCeEEEEe--CCeEEEEEecCC---CceeceEEcCCCc-EEEEeCC-CceEEEc-CCC-e-EEEEeecCCcccc
Q 017520 92 IYTATRDGWIKRLQ--DGTWVNWKFIDS---QTLVGLTSTKEGH-LIICDNA-NGLHKVS-EDG-V-ENFLSYVNGSKLR 161 (370)
Q Consensus 92 l~v~~~~g~I~~~~--~g~~~~~~~~~~---~p~~gl~~d~~G~-L~v~~~~-~gi~~~~-~~g-~-~~~~~~~~g~~~~ 161 (370)
++++..++.|..++ +++......... .|. +++++++|+ +|++... ..|..++ .++ . ..+.....+....
T Consensus 4 ~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~ 82 (337)
T 1pby_B 4 ILAPARPDKLVVIDTEKMAVDKVITIADAGPTPM-VPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVK 82 (337)
T ss_dssp EEEEETTTEEEEEETTTTEEEEEEECTTCTTCCC-CEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEE
T ss_pred EEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCcc-ceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccc
Confidence 45566788999999 666554444444 688 999999994 7888765 4588888 566 3 3332111111112
Q ss_pred cccceEEcCCC-cEEEEeCCCCCCCccceecccccC-CCceEEEEeCCCCeEEEEecCCCCccceEEccCCCEEEEEeCC
Q 017520 162 FANDVVEASDG-SLYFTVSSSKYLPHEYCLDILEGK-PHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESW 239 (370)
Q Consensus 162 ~~~~l~~d~~G-~l~v~d~~~~~~~~~~~~~~~~~~-~~g~l~~~d~~t~~~~~~~~~~~~p~gi~~~~dg~~l~v~~~~ 239 (370)
.+..++++++| .+|+++....... . +.. ..+.|+.+|.++++..........+.++++++||+.+|++ .+
T Consensus 83 ~~~~~~~s~dg~~l~~~~~~~~~~~-~------~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~-~~ 154 (337)
T 1pby_B 83 SLFGAALSPDGKTLAIYESPVRLEL-T------HFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGL-GR 154 (337)
T ss_dssp CTTCEEECTTSSEEEEEEEEEEECS-S------CEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEE-SS
T ss_pred cccceEECCCCCEEEEEeccccccc-c------cccccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEe-CC
Confidence 57889999999 5888752100000 0 000 2478999999887765544445578999999999988888 33
Q ss_pred cEEEEEeCCC
Q 017520 240 KCRKYWLKGE 249 (370)
Q Consensus 240 ~l~~~~~~~~ 249 (370)
.|+++++.+.
T Consensus 155 ~i~~~d~~~~ 164 (337)
T 1pby_B 155 DLHVMDPEAG 164 (337)
T ss_dssp SEEEEETTTT
T ss_pred eEEEEECCCC
Confidence 3999998654
No 112
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.01 E-value=6.1e-08 Score=85.07 Aligned_cols=189 Identities=14% Similarity=0.123 Sum_probs=123.3
Q ss_pred eeceEEcCCCcEEEEeCCC-ceEEEc-CCC--eEEEEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceeccccc
Q 017520 120 LVGLTSTKEGHLIICDNAN-GLHKVS-EDG--VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEG 195 (370)
Q Consensus 120 ~~gl~~d~~G~L~v~~~~~-gi~~~~-~~g--~~~~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~ 195 (370)
. ||.++ ++.||++.... .|.++| ++| ...+ .+.. .+..+++++ .++||+.+.
T Consensus 58 q-GL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~---l~~~--~FgeGit~~-g~~Ly~ltw---------------- 113 (268)
T 3nok_A 58 Q-GLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME---RLGN--IFAEGLASD-GERLYQLTW---------------- 113 (268)
T ss_dssp E-EEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE---ECTT--CCEEEEEEC-SSCEEEEES----------------
T ss_pred c-eEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE---CCCC--cceeEEEEe-CCEEEEEEc----------------
Confidence 5 89997 57999998764 477788 677 4443 2221 244557775 358999975
Q ss_pred CCCceEEEEeCCCCeEEEEecCCCCccceEEccCCCEEEEEeCCc-EEEEEeCCCCCCceeeeccC-CC-CCCCceeECC
Q 017520 196 KPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWK-CRKYWLKGERKGKLETFAEN-LP-GAPDNINLAP 272 (370)
Q Consensus 196 ~~~g~l~~~d~~t~~~~~~~~~~~~p~gi~~~~dg~~l~v~~~~~-l~~~~~~~~~~~~~~~~~~~-~~-g~p~~i~~d~ 272 (370)
.++.+++||+++.+...-... .+.|..+++|++.||+++..+ |+.+|+++.+....-..... .+ ..++.+...
T Consensus 114 -~~~~v~V~D~~Tl~~~~ti~~--~~eGwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~- 189 (268)
T 3nok_A 114 -TEGLLFTWSGMPPQRERTTRY--SGEGWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA- 189 (268)
T ss_dssp -SSCEEEEEETTTTEEEEEEEC--SSCCCCEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-
T ss_pred -cCCEEEEEECCcCcEEEEEeC--CCceeEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-
Confidence 357899999988776543332 345666667888999999655 99999765432111111111 01 123445555
Q ss_pred CCCEEEEEecCchhHHHhhhcchhHHHHHHhCCccccccccCCCceEEEEECC-CCcEEEEEeCCC---------CCccc
Q 017520 273 DGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAE-DGTIIRNLVDPT---------GQLMS 342 (370)
Q Consensus 273 ~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~-~g~~~~~~~~~~---------g~~~~ 342 (370)
+|.+|+..+.. ..|.++|+ .|+++..+.... ....+
T Consensus 190 dG~lyanvw~s----------------------------------~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~ 235 (268)
T 3nok_A 190 NGVIYANIWHS----------------------------------SDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEA 235 (268)
T ss_dssp TTEEEEEETTC----------------------------------SEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTC
T ss_pred CCEEEEEECCC----------------------------------CeEEEEeCCCCcEEEEEECCCCcccccccccCcCC
Confidence 78999998765 36999997 689988875421 00112
Q ss_pred cceeEEEE--CCEEEEEeCCCCeEEEEeCC
Q 017520 343 FVTSGLQV--DNHLYVISLTSNFIGKVQLS 370 (370)
Q Consensus 343 ~~t~~~~~--~g~L~~gs~~~~~i~~~~~~ 370 (370)
....++.+ .++||+.+..=+.+-.++++
T Consensus 236 vlNGIA~dp~~~rlfVTGK~Wp~~~ev~~~ 265 (268)
T 3nok_A 236 VLNGIAVEPGSGRIFMTGKLWPRLFEVRLD 265 (268)
T ss_dssp CEEEEEECTTTCCEEEEETTCSEEEEEEEE
T ss_pred ceEEEEEcCCCCEEEEeCCCCCceEEEEEE
Confidence 33455554 37899999999998888763
No 113
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.01 E-value=2.2e-07 Score=91.56 Aligned_cols=226 Identities=8% Similarity=-0.049 Sum_probs=142.2
Q ss_pred EcCCCcEEEEe-cCCeEEEEe--CCeEEEEEecCCCceeceEEcCCCc-EEEEeCCCceEEEcC---CCeEEEEeecCCc
Q 017520 86 MDKNGVIYTAT-RDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGH-LIICDNANGLHKVSE---DGVENFLSYVNGS 158 (370)
Q Consensus 86 ~d~~G~l~v~~-~~g~I~~~~--~g~~~~~~~~~~~p~~gl~~d~~G~-L~v~~~~~gi~~~~~---~g~~~~~~~~~g~ 158 (370)
.|+.+.+|+.. .++.|..+| ++++......+..|+ ++++++||+ +|+++....|..+|. ++ +.+.....|
T Consensus 163 ~d~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~~p~-~v~~SpDGr~lyv~~~dg~V~viD~~~~t~-~~v~~i~~G- 239 (567)
T 1qks_A 163 WDLENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYAVH-ISRLSASGRYLFVIGRDGKVNMIDLWMKEP-TTVAEIKIG- 239 (567)
T ss_dssp CCGGGEEEEEETTTTEEEEEETTTCCEEEEEECSSCEE-EEEECTTSCEEEEEETTSEEEEEETTSSSC-CEEEEEECC-
T ss_pred cCCCceEEEEeCCCCeEEEEECCCCeEEEEEeCCCCcc-ceEECCCCCEEEEEcCCCeEEEEECCCCCC-cEeEEEecC-
Confidence 44556788887 678999999 666655455666899 999999996 899886667899984 44 222222223
Q ss_pred ccccccceEEc----CCC-cEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEe-cC-----------CCCc
Q 017520 159 KLRFANDVVEA----SDG-SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-DG-----------FYFA 221 (370)
Q Consensus 159 ~~~~~~~l~~d----~~G-~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~-~~-----------~~~p 221 (370)
..+..++++ +|| .+|+++. ..+.+..+|..+.+..... .. ....
T Consensus 240 --~~P~~ia~s~~~~pDGk~l~v~n~-----------------~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rv 300 (567)
T 1qks_A 240 --SEARSIETSKMEGWEDKYAIAGAY-----------------WPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRV 300 (567)
T ss_dssp --SEEEEEEECCSTTCTTTEEEEEEE-----------------ETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCE
T ss_pred --CCCceeEEccccCCCCCEEEEEEc-----------------cCCeEEEEECCCCcEEEEEeccccccccccccCCCce
Confidence 357899999 598 5888864 3467889998776554322 11 0123
Q ss_pred cceEEccCCCEEEEEeCCc--EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCCE-EEEEecCchhHHHhhhcchhHH
Q 017520 222 NGVALSRDEDYVVVCESWK--CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTF-WIAIIKLDARRMKILNSSKLIK 298 (370)
Q Consensus 222 ~gi~~~~dg~~l~v~~~~~--l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~l-wv~~~~~~~~~~~~~~~~~~~~ 298 (370)
.++..++++..++++.... |+.+|....+.-....+ ....++.++.+|++|++ |++....
T Consensus 301 a~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i--~~~~~~~d~~~~pdgr~~~va~~~s--------------- 363 (567)
T 1qks_A 301 AAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEI--SAERFLHDGGLDGSHRYFITAANAR--------------- 363 (567)
T ss_dssp EEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEE--ECCSSEEEEEECTTSCEEEEEEGGG---------------
T ss_pred EEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeee--eccccccCceECCCCCEEEEEeCCC---------------
Confidence 4677888887777776543 88888754321111111 12335778899999975 5555443
Q ss_pred HHHHhCCccccccccCCCceEEEEECC-CCcEEEEEeCCCCCcccccee--EEEE-CCEEEEEe-CCCCeEEEEeCC
Q 017520 299 HVLAAYPKLFSQFITLGGGAHLIHVAE-DGTIIRNLVDPTGQLMSFVTS--GLQV-DNHLYVIS-LTSNFIGKVQLS 370 (370)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~g~v~~~~~-~g~~~~~~~~~~g~~~~~~t~--~~~~-~g~L~~gs-~~~~~i~~~~~~ 370 (370)
..|..+|. .++++..... .|..-+.... +... .+.+|+.+ +..+.|.+++.+
T Consensus 364 -------------------n~V~ViD~~t~kl~~~i~v-gg~~Phpg~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~ 420 (567)
T 1qks_A 364 -------------------NKLVVIDTKEGKLVAIEDT-GGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTD 420 (567)
T ss_dssp -------------------TEEEEEETTTTEEEEEEEC-SSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECC
T ss_pred -------------------CeEEEEECCCCcEEEEEec-cCcCCCCccceeeECCCCCcEEEeCCCCCCeEEEecCC
Confidence 34777885 5677666643 0221222122 2223 37888865 455788888754
No 114
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.99 E-value=7.5e-08 Score=91.29 Aligned_cols=241 Identities=12% Similarity=0.059 Sum_probs=138.6
Q ss_pred ceEecCCCcCCCcceEEcCCC-cEEEEec----------CCeEEEEe--CCeEEE-EEec-------CCCceeceEEcCC
Q 017520 70 FIKVGEGSVNHPEDASMDKNG-VIYTATR----------DGWIKRLQ--DGTWVN-WKFI-------DSQTLVGLTSTKE 128 (370)
Q Consensus 70 ~~~~~~~~~~~P~~i~~d~~G-~l~v~~~----------~g~I~~~~--~g~~~~-~~~~-------~~~p~~gl~~d~~ 128 (370)
...++.|. .| +|++++|| .+|+++. ++.|..+| +++... +.-. ...|. ++++++|
T Consensus 112 v~~I~vG~--~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~-~~~~spD 187 (426)
T 3c75_H 112 LGMTDGGF--LP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQW-MNALTPD 187 (426)
T ss_dssp EEEEEECS--SC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGG-GSEECTT
T ss_pred EEEEECCC--CC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcc-eEEEcCC
Confidence 34455553 68 99999988 6999872 56799999 565443 3222 35689 9999999
Q ss_pred C-cEEEEeCC--CceEEEc-CCC--eEEEEeecCCcccccccceEEcCCC-cEEEEeCCCCCCCccceecccccCCCceE
Q 017520 129 G-HLIICDNA--NGLHKVS-EDG--VENFLSYVNGSKLRFANDVVEASDG-SLYFTVSSSKYLPHEYCLDILEGKPHGQL 201 (370)
Q Consensus 129 G-~L~v~~~~--~gi~~~~-~~g--~~~~~~~~~g~~~~~~~~l~~d~~G-~l~v~d~~~~~~~~~~~~~~~~~~~~g~l 201 (370)
| .|||++.. +.|..+| .++ +..+ .. .+. ..+.++| +.|++.. .+|.+
T Consensus 188 Gk~lyV~n~~~~~~VsVID~~t~kvv~~I-~v-~g~-------~~~~p~g~~~~v~~~-----------------~dG~~ 241 (426)
T 3c75_H 188 NKNLLFYQFSPAPAVGVVDLEGKTFDRML-DV-PDC-------YHIFPASPTVFYMNC-----------------RDGSL 241 (426)
T ss_dssp SSEEEEEECSSSCEEEEEETTTTEEEEEE-EC-CSE-------EEEEEEETTEEEEEE-----------------TTSSE
T ss_pred CCEEEEEecCCCCeEEEEECCCCeEEEEE-Ec-CCc-------eeeccCCCcEEEEEc-----------------CCCCE
Confidence 9 49998753 4688898 566 3322 11 111 1222222 4444432 23455
Q ss_pred EEEeCCCCeEEEE----ecCCCCc--cceEEccCCCEEEEEeCCc-EEEEEeCCCCCCceeeec---------cCCCCCC
Q 017520 202 LKYDPSSNITTLV----ADGFYFA--NGVALSRDEDYVVVCESWK-CRKYWLKGERKGKLETFA---------ENLPGAP 265 (370)
Q Consensus 202 ~~~d~~t~~~~~~----~~~~~~p--~gi~~~~dg~~l~v~~~~~-l~~~~~~~~~~~~~~~~~---------~~~~g~p 265 (370)
..++..++++... ..-...| ..+.++++++.+|+....+ ++++|..+........+. ...+...
T Consensus 242 ~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~ 321 (426)
T 3c75_H 242 ARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGW 321 (426)
T ss_dssp EEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSS
T ss_pred EEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCc
Confidence 5555544433311 1111122 3356788988888887766 999998654211001110 0011222
Q ss_pred CceeECCCC-CEEEEEecCchhHHHhhhcchhHHHHHHhCCccccccccCCCceEEEEECC-CCcEEEEEeCCCCCcccc
Q 017520 266 DNINLAPDG-TFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAE-DGTIIRNLVDPTGQLMSF 343 (370)
Q Consensus 266 ~~i~~d~~G-~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~-~g~~~~~~~~~~g~~~~~ 343 (370)
..++++++| ++||+...+... . -....+.|..+|. .++++..+.... .
T Consensus 322 ~~va~s~dg~rlyVa~~~~~~g--------------------t-----hk~~s~~VsVID~~T~kvv~~I~vg~-----~ 371 (426)
T 3c75_H 322 QQTAYHRQSDRIYLLVDQRDEW--------------------K-----HKAASRFVVVLNAETGERINKIELGH-----E 371 (426)
T ss_dssp SCEEEEGGGTEEEEEEEECCTT--------------------C-----TTSCEEEEEEEETTTCCEEEEEEEEE-----E
T ss_pred eeeEEcCCCCEEEEEecccccc--------------------c-----ccCCCCEEEEEECCCCeEEEEEECCC-----C
Confidence 348899887 599987532000 0 0011246889995 588888886432 1
Q ss_pred ceeEE-EEC-C-EEEEEeCCCCeEEEEeCC
Q 017520 344 VTSGL-QVD-N-HLYVISLTSNFIGKVQLS 370 (370)
Q Consensus 344 ~t~~~-~~~-g-~L~~gs~~~~~i~~~~~~ 370 (370)
...+. ..+ . .||+....++.|.++++.
T Consensus 372 P~gia~spDg~~~lyv~n~~s~~VsVID~~ 401 (426)
T 3c75_H 372 IDSINVSQDAEPLLYALSAGTQTLHIYDAA 401 (426)
T ss_dssp ECEEEECCSSSCEEEEEETTTTEEEEEETT
T ss_pred cCeEEEccCCCEEEEEEcCCCCeEEEEECC
Confidence 23333 334 4 688888889999999863
No 115
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.97 E-value=4.4e-07 Score=89.49 Aligned_cols=238 Identities=14% Similarity=0.114 Sum_probs=142.7
Q ss_pred CCCcceEEcCCC-cEEEEecCCeEEEEe-C---CeEEEEEecCCCceeceEEc----CCCc-EEEEeCC-CceEEEc-CC
Q 017520 79 NHPEDASMDKNG-VIYTATRDGWIKRLQ-D---GTWVNWKFIDSQTLVGLTST----KEGH-LIICDNA-NGLHKVS-ED 146 (370)
Q Consensus 79 ~~P~~i~~d~~G-~l~v~~~~g~I~~~~-~---g~~~~~~~~~~~p~~gl~~d----~~G~-L~v~~~~-~gi~~~~-~~ 146 (370)
..|+++++++|| .+|+++.+|.|..+| . ++...-...+..|. +++++ +||+ +|+++.. ..+..+| .+
T Consensus 197 ~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~P~-~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t 275 (567)
T 1qks_A 197 YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEAR-SIETSKMEGWEDKYAIAGAYWPPQYVIMDGET 275 (567)
T ss_dssp SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEE-EEEECCSTTCTTTEEEEEEEETTEEEEEETTT
T ss_pred CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCCCc-eeEEccccCCCCCEEEEEEccCCeEEEEECCC
Confidence 378999999988 589999889999999 3 23333334456789 99999 5895 8988766 5577777 45
Q ss_pred C--eEEEEe-ec--CC---cccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEE--ec
Q 017520 147 G--VENFLS-YV--NG---SKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLV--AD 216 (370)
Q Consensus 147 g--~~~~~~-~~--~g---~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~--~~ 216 (370)
. ++.+.. .. .+ .+...+..+..++++..|+... ...|.|+.+|..+...... ..
T Consensus 276 ~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~----------------~~~g~v~~vd~~~~~~~~v~~i~ 339 (567)
T 1qks_A 276 LEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNV----------------KETGKILLVDYTDLNNLKTTEIS 339 (567)
T ss_dssp CCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEE----------------TTTTEEEEEETTCSSEEEEEEEE
T ss_pred CcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEe----------------cCCCeEEEEecCCCccceeeeee
Confidence 4 333321 11 11 0111344677777765444422 1468899999765422111 22
Q ss_pred CCCCccceEEccCCCEEEEEeCCc--EEEEEeCCCCCCceeeeccCCCCCC-Ccee-ECCC-CCEEEEEecCchhHHHhh
Q 017520 217 GFYFANGVALSRDEDYVVVCESWK--CRKYWLKGERKGKLETFAENLPGAP-DNIN-LAPD-GTFWIAIIKLDARRMKIL 291 (370)
Q Consensus 217 ~~~~p~gi~~~~dg~~l~v~~~~~--l~~~~~~~~~~~~~~~~~~~~~g~p-~~i~-~d~~-G~lwv~~~~~~~~~~~~~ 291 (370)
...++.++.+++||+++|++.... |.++|.+..+....-......| .| .+.. ++++ |.+|++...+
T Consensus 340 ~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~P-hpg~g~~~~~p~~g~v~~t~~~g-------- 410 (567)
T 1qks_A 340 AERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTP-HPGRGANFVHPTFGPVWATSHMG-------- 410 (567)
T ss_dssp CCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSB-CCTTCEEEEETTTEEEEEEEBSS--------
T ss_pred ccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCC-CCccceeeECCCCCcEEEeCCCC--------
Confidence 345788899999999999998655 9999987543211111101111 12 3544 4665 6799876533
Q ss_pred hcchhHHHHHHhCCccccccccCCCceEEEEECCC--------CcEEEEEeCCCCCccccceeEEEECCEEEEEeC-C--
Q 017520 292 NSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAED--------GTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISL-T-- 360 (370)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~--------g~~~~~~~~~~g~~~~~~t~~~~~~g~L~~gs~-~-- 360 (370)
.+.|..+|.+ -++++.+....+. ...-.....+.+||+.+. +
T Consensus 411 -------------------------~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g--~~~i~~~p~~~~l~v~~~~~~~ 463 (567)
T 1qks_A 411 -------------------------DDSVALIGTDPEGHPDNAWKILDSFPALGGG--SLFIKTHPNSQYLYVDATLNPE 463 (567)
T ss_dssp -------------------------SSEEEEEECCTTTCTTTBTSEEEEEECSCSC--CCCEECCTTCSEEEEECTTCSS
T ss_pred -------------------------CCeEEEecCCCCCCccccCEEEEEEecCCCC--CEEEEeCCCCCeEEEecCCCCC
Confidence 1246666643 3677777654211 011111123468999884 3
Q ss_pred ---CCeEEEEeC
Q 017520 361 ---SNFIGKVQL 369 (370)
Q Consensus 361 ---~~~i~~~~~ 369 (370)
++.|++|++
T Consensus 464 ~~~~~~v~v~d~ 475 (567)
T 1qks_A 464 AEISGSVAVFDI 475 (567)
T ss_dssp HHHHTCEEEEEG
T ss_pred cccCceEEEEEC
Confidence 358998875
No 116
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=98.96 E-value=1.1e-06 Score=86.31 Aligned_cols=176 Identities=15% Similarity=0.193 Sum_probs=114.7
Q ss_pred CCcceEEcCCCcEE-EEecCCeEEEEe-CC-eEEEEEecCCCceeceEEcCCCcEEEEeCCCce-EEEcCCC--eEEEEe
Q 017520 80 HPEDASMDKNGVIY-TATRDGWIKRLQ-DG-TWVNWKFIDSQTLVGLTSTKEGHLIICDNANGL-HKVSEDG--VENFLS 153 (370)
Q Consensus 80 ~P~~i~~d~~G~l~-v~~~~g~I~~~~-~g-~~~~~~~~~~~p~~gl~~d~~G~L~v~~~~~gi-~~~~~~g--~~~~~~ 153 (370)
...++++.++|... .+..+|.|..++ ++ ....+........ +++++++|+..+.....|. ..++.++ +..+..
T Consensus 305 ~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~~~~~~~~~~~v~-~~~~s~~g~~l~~~~~dg~v~~~~~~~~~~~~~~~ 383 (577)
T 2ymu_A 305 SVWGVAFSPDGQTIASASDDKTVKLWNRNGQHLQTLTGHSSSVW-GVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTG 383 (577)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEE-EEEECTTSSEEEEEETTSEEEEEETTCCEEEEEEC
T ss_pred CeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeeEEEeCCCCCEE-EEEECCCCCEEEEEeCCCEEEEEcCCCCEEEEecC
Confidence 45678888888654 556888899999 44 4555544455567 8999999986665444454 4445656 333321
Q ss_pred ecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecCCCCccceEEccCCCEE
Q 017520 154 YVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYV 233 (370)
Q Consensus 154 ~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~p~gi~~~~dg~~l 233 (370)
. ...+..++++++|+..++.+ .++.|..||........+...-.....+++++|++.+
T Consensus 384 ~-----~~~v~~~~~s~dg~~l~~~~-----------------~d~~v~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l 441 (577)
T 2ymu_A 384 H-----SSSVRGVAFSPDGQTIASAS-----------------DDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDDQTI 441 (577)
T ss_dssp C-----SSCEEEEEECTTSSCEEEEE-----------------TTSEEEEECTTCCEEEEEECCSSCEEEEEECTTSSEE
T ss_pred C-----CCCeEEEEECCCCCEEEEEe-----------------CCCEEEEEeCCCCEEEEecCCCCCeEEEEECCCCCEE
Confidence 1 13577899999998665533 3467888887655555544444456789999999988
Q ss_pred EEEeCCc-EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCCEEEEEec
Q 017520 234 VVCESWK-CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 282 (370)
Q Consensus 234 ~v~~~~~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~ 282 (370)
..+...+ |..|+.++. ....+. ........++++++|++.++...
T Consensus 442 ~~~~~d~~v~~w~~~~~---~~~~~~-~~~~~v~~~~~spd~~~las~~~ 487 (577)
T 2ymu_A 442 ASASDDKTVKLWNRNGQ---LLQTLT-GHSSSVRGVAFSPDGQTIASASD 487 (577)
T ss_dssp EEEETTSEEEEEETTSC---EEEEEE-CCSSCEEEEEECTTSCEEEEEET
T ss_pred EEEcCCCEEEEEECCCC---EEEEEc-CCCCCEEEEEEcCCCCEEEEEeC
Confidence 7777777 888886543 222222 22333566889999987766544
No 117
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.96 E-value=1.7e-07 Score=81.47 Aligned_cols=191 Identities=15% Similarity=0.140 Sum_probs=123.0
Q ss_pred ceeceEEcCCCcEEEEeCCC---ceEEEc-CCC-eEEEEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceeccc
Q 017520 119 TLVGLTSTKEGHLIICDNAN---GLHKVS-EDG-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDIL 193 (370)
Q Consensus 119 p~~gl~~d~~G~L~v~~~~~---gi~~~~-~~g-~~~~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~ 193 (370)
.. |+.++. +.||++.... .|.++| ++| +..-.. .+.. .+..+++++ +++||+.+.
T Consensus 23 tq-GL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~-l~~~--~fgeGi~~~-~~~ly~ltw-------------- 82 (243)
T 3mbr_X 23 TE-GLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAE-VPPP--YFGAGIVAW-RDRLIQLTW-------------- 82 (243)
T ss_dssp EE-EEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEE-CCTT--CCEEEEEEE-TTEEEEEES--------------
T ss_pred cc-cEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEe-CCCC--cceeEEEEe-CCEEEEEEe--------------
Confidence 45 999985 8999997653 588999 677 332222 1221 244566665 468999975
Q ss_pred ccCCCceEEEEeCCCCeEEEEecCCCCccceEEccCCCEEEEEeCCc-EEEEEeCCCCCCceeeecc-CCC-CCCCceeE
Q 017520 194 EGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWK-CRKYWLKGERKGKLETFAE-NLP-GAPDNINL 270 (370)
Q Consensus 194 ~~~~~g~l~~~d~~t~~~~~~~~~~~~p~gi~~~~dg~~l~v~~~~~-l~~~~~~~~~~~~~~~~~~-~~~-g~p~~i~~ 270 (370)
.++.+++||+++.+...-... ...|..++.|++.||+++..+ |+.+|+++.+....-.... ..+ ..++.+..
T Consensus 83 ---~~~~v~v~D~~tl~~~~ti~~--~~~Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~ 157 (243)
T 3mbr_X 83 ---RNHEGFVYDLATLTPRARFRY--PGEGWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEW 157 (243)
T ss_dssp ---SSSEEEEEETTTTEEEEEEEC--SSCCCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEE
T ss_pred ---eCCEEEEEECCcCcEEEEEeC--CCCceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEE
Confidence 457899999988766443322 235677778888899998655 9999976543211111111 111 12333444
Q ss_pred CCCCCEEEEEecCchhHHHhhhcchhHHHHHHhCCccccccccCCCceEEEEECC-CCcEEEEEeCCCC---------Cc
Q 017520 271 APDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAE-DGTIIRNLVDPTG---------QL 340 (370)
Q Consensus 271 d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~-~g~~~~~~~~~~g---------~~ 340 (370)
. +|.+|+..+.. ..|.++|+ .|+++..+....- ..
T Consensus 158 ~-~G~lyanvw~s----------------------------------~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~ 202 (243)
T 3mbr_X 158 V-NGELLANVWLT----------------------------------SRIARIDPASGKVVAWIDLQALVPDADALTDST 202 (243)
T ss_dssp E-TTEEEEEETTT----------------------------------TEEEEECTTTCBEEEEEECGGGSTTTTSCCCTT
T ss_pred e-CCEEEEEECCC----------------------------------CeEEEEECCCCCEEEEEECCcCccccccccCCc
Confidence 4 78999998764 35899997 6899998753210 01
Q ss_pred cccceeEEEE--CCEEEEEeCCCCeEEEEeC
Q 017520 341 MSFVTSGLQV--DNHLYVISLTSNFIGKVQL 369 (370)
Q Consensus 341 ~~~~t~~~~~--~g~L~~gs~~~~~i~~~~~ 369 (370)
.+....++.+ .++||+.+..=+.+-.+++
T Consensus 203 ~~vlNGIA~d~~~~~lfVTGK~wp~~~~v~~ 233 (243)
T 3mbr_X 203 NDVLNGIAFDAEHDRLFVTGKRWPMLYEIRL 233 (243)
T ss_dssp SSCEEEEEEETTTTEEEEEETTCSEEEEEEE
T ss_pred CCceEEEEEcCCCCEEEEECCCCCcEEEEEE
Confidence 1233455554 4899999999999888775
No 118
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=98.96 E-value=3.4e-06 Score=76.81 Aligned_cols=179 Identities=13% Similarity=0.137 Sum_probs=115.8
Q ss_pred CCCcceEEcCCCcEE-EEecCCeEEEEe--CCeE-EEEEecCCCceeceEEcCCCcEEEEeCCC-ceEEEc-CCC-eEEE
Q 017520 79 NHPEDASMDKNGVIY-TATRDGWIKRLQ--DGTW-VNWKFIDSQTLVGLTSTKEGHLIICDNAN-GLHKVS-EDG-VENF 151 (370)
Q Consensus 79 ~~P~~i~~d~~G~l~-v~~~~g~I~~~~--~g~~-~~~~~~~~~p~~gl~~d~~G~L~v~~~~~-gi~~~~-~~g-~~~~ 151 (370)
..-.++++.+++.+. .++.++.|..|+ +++. ..+........ .++++++|+.+++.... .+..++ +++ ....
T Consensus 81 ~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~-~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~ 159 (321)
T 3ow8_A 81 LGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAW-TLAFSPDSQYLATGTHVGKVNIFGVESGKKEYS 159 (321)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCC-CEEECTTSSEEEEECTTSEEEEEETTTCSEEEE
T ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEE-EEEECCCCCEEEEEcCCCcEEEEEcCCCceeEE
Confidence 345667787777554 556899999999 5653 33433444566 89999999876665444 455566 555 2221
Q ss_pred EeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecCC-CCccceEEccCC
Q 017520 152 LSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGF-YFANGVALSRDE 230 (370)
Q Consensus 152 ~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~-~~p~gi~~~~dg 230 (370)
... . ...+..++++++|+..++.+ .++.|..||..+++......+. .....+++++|+
T Consensus 160 ~~~-~---~~~v~~~~~spdg~~lasg~-----------------~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~ 218 (321)
T 3ow8_A 160 LDT-R---GKFILSIAYSPDGKYLASGA-----------------IDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDS 218 (321)
T ss_dssp EEC-S---SSCEEEEEECTTSSEEEEEE-----------------TTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTS
T ss_pred ecC-C---CceEEEEEECCCCCEEEEEc-----------------CCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCC
Confidence 111 1 13577899999998766643 3578999999887765444433 345789999999
Q ss_pred CEEEEEeCCc-EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCCEEEEEec
Q 017520 231 DYVVVCESWK-CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 282 (370)
Q Consensus 231 ~~l~v~~~~~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~ 282 (370)
+.++.+...+ |..||+.... ....+. ...+....+++.++|.+.++...
T Consensus 219 ~~l~s~s~dg~i~iwd~~~~~--~~~~~~-~h~~~v~~~~~sp~~~~l~s~s~ 268 (321)
T 3ow8_A 219 QLLVTASDDGYIKIYDVQHAN--LAGTLS-GHASWVLNVAFCPDDTHFVSSSS 268 (321)
T ss_dssp CEEEEECTTSCEEEEETTTCC--EEEEEC-CCSSCEEEEEECTTSSEEEEEET
T ss_pred CEEEEEcCCCeEEEEECCCcc--eeEEEc-CCCCceEEEEECCCCCEEEEEeC
Confidence 9777777666 9999876532 122222 23333556889999986666543
No 119
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.94 E-value=8.7e-08 Score=86.80 Aligned_cols=159 Identities=10% Similarity=0.045 Sum_probs=100.9
Q ss_pred cCCCceeceEEcC-CCcEEEEeCC-CceEEEcCC-C-eEEEE-eecC--CcccccccceEE---cCCCcEEE-EeCCCCC
Q 017520 115 IDSQTLVGLTSTK-EGHLIICDNA-NGLHKVSED-G-VENFL-SYVN--GSKLRFANDVVE---ASDGSLYF-TVSSSKY 183 (370)
Q Consensus 115 ~~~~p~~gl~~d~-~G~L~v~~~~-~gi~~~~~~-g-~~~~~-~~~~--g~~~~~~~~l~~---d~~G~l~v-~d~~~~~ 183 (370)
....|- ++++|+ +|.+|+++.. +.|.+++++ + ...+. .... +.+...+.+|.+ |++|+||+ .+.+..+
T Consensus 11 ~~~yPE-~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af 89 (334)
T 2p9w_A 11 KNLTPE-DTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSF 89 (334)
T ss_dssp TTCCCS-CEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTT
T ss_pred cccCCc-CccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccc
Confidence 344577 999975 6789999965 679999965 4 44331 1111 333446789999 79999999 4432222
Q ss_pred CCccceecccccCCCceEEEEeCC---CCeEEEEec--------------CCCCccceEEccCCCEEEEEeCC--c-EEE
Q 017520 184 LPHEYCLDILEGKPHGQLLKYDPS---SNITTLVAD--------------GFYFANGVALSRDEDYVVVCESW--K-CRK 243 (370)
Q Consensus 184 ~~~~~~~~~~~~~~~g~l~~~d~~---t~~~~~~~~--------------~~~~p~gi~~~~dg~~l~v~~~~--~-l~~ 243 (370)
.... ....+...|++||++ +++...... ....+|.+++|++|+ .||+++. . |+|
T Consensus 90 ~~~g-----~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~Gn-aYVt~s~~~~~I~r 163 (334)
T 2p9w_A 90 NFAD-----QSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGN-SYVAFALGMPAIAR 163 (334)
T ss_dssp CTTS-----CCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSC-EEEEEEESSCEEEE
T ss_pred cccc-----cccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCC-EEEeCCCCCCeEEE
Confidence 1110 011235689999988 565433321 223589999999999 8997654 4 999
Q ss_pred EEeCCCCCCceeeec-cC----CCCCCCceeECCCCCEEEEEecC
Q 017520 244 YWLKGERKGKLETFA-EN----LPGAPDNINLAPDGTFWIAIIKL 283 (370)
Q Consensus 244 ~~~~~~~~~~~~~~~-~~----~~g~p~~i~~d~~G~lwv~~~~~ 283 (370)
++.+|... ..+. .. ....++||+++++|++.+.....
T Consensus 164 V~pdG~~~---~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~ 205 (334)
T 2p9w_A 164 VSADGKTV---STFAWESGNGGQRPGYSGITFDPHSNKLIAFGGP 205 (334)
T ss_dssp ECTTSCCE---EEEEECCCCSSSCCSCSEEEEETTTTEEEEESSS
T ss_pred EeCCCCEE---eeeeecCCCcccccCcceEEEeCCCCEEEEEcCC
Confidence 99887522 2221 11 01137899999999877776443
No 120
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.94 E-value=2.1e-07 Score=86.58 Aligned_cols=213 Identities=13% Similarity=0.124 Sum_probs=125.2
Q ss_pred CCCcEEEEecCCeEEEEe--CCeEEEEEecCCCceeceEEcCCCcEEEEeCCCceEEEc-CCC-eEEEEeecCC-ccccc
Q 017520 88 KNGVIYTATRDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGHLIICDNANGLHKVS-EDG-VENFLSYVNG-SKLRF 162 (370)
Q Consensus 88 ~~G~l~v~~~~g~I~~~~--~g~~~~~~~~~~~p~~gl~~d~~G~L~v~~~~~gi~~~~-~~g-~~~~~~~~~g-~~~~~ 162 (370)
.+|.+|+++.+|.|+.++ +|+...-............++ +|.+|++...++++.++ .+| .......... .....
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~-~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~ 180 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVS-DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRG 180 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEEE-TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CC
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEEE-CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecC
Confidence 478999999999999999 687654333333333133443 78999988777799999 678 4332221110 00011
Q ss_pred ccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecCCCCc-------------cceEEccC
Q 017520 163 ANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFA-------------NGVALSRD 229 (370)
Q Consensus 163 ~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~p-------------~gi~~~~d 229 (370)
....+++ +|.+|++.. .+.|+.+|+++++....... ..+ ....+ .
T Consensus 181 ~~~~~~~-~~~v~~g~~------------------~g~l~~~d~~tG~~~w~~~~-~~~~~~~~~~~~~~~~~~p~~--~ 238 (376)
T 3q7m_A 181 ESAPTTA-FGAAVVGGD------------------NGRVSAVLMEQGQMIWQQRI-SQATGSTEIDRLSDVDTTPVV--V 238 (376)
T ss_dssp CCCCEEE-TTEEEECCT------------------TTEEEEEETTTCCEEEEEEC-CC-----------CCCCCCEE--E
T ss_pred CCCcEEE-CCEEEEEcC------------------CCEEEEEECCCCcEEEEEec-ccCCCCcccccccccCCCcEE--E
Confidence 1223443 678988743 37899999987766432211 111 11122 2
Q ss_pred CCEEEEEeCCc-EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCCEEEEEecCchhHHHhhhcchhHHHHHHhCCccc
Q 017520 230 EDYVVVCESWK-CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLF 308 (370)
Q Consensus 230 g~~l~v~~~~~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (370)
++.+|++...+ |+.++.++.+ . .+..... ....+..+ ++++|+++..+
T Consensus 239 ~~~v~~~~~~g~l~~~d~~tG~---~-~w~~~~~-~~~~~~~~-~~~l~~~~~~g------------------------- 287 (376)
T 3q7m_A 239 NGVVFALAYNGNLTALDLRSGQ---I-MWKRELG-SVNDFIVD-GNRIYLVDQND------------------------- 287 (376)
T ss_dssp TTEEEEECTTSCEEEEETTTCC---E-EEEECCC-CEEEEEEE-TTEEEEEETTC-------------------------
T ss_pred CCEEEEEecCcEEEEEECCCCc---E-EeeccCC-CCCCceEE-CCEEEEEcCCC-------------------------
Confidence 34588887666 9999975432 1 1111111 12334444 67899998654
Q ss_pred cccccCCCceEEEEECC-CCcEEEEEeCCCCCccccceeEEEECCEEEEEeCCCCeEEEEe
Q 017520 309 SQFITLGGGAHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIGKVQ 368 (370)
Q Consensus 309 ~~~~~~~~~g~v~~~~~-~g~~~~~~~~~~g~~~~~~t~~~~~~g~L~~gs~~~~~i~~~~ 368 (370)
.++.+|. +|+.++.+....+. ..+.....+++||+++..+ .|..++
T Consensus 288 ----------~l~~~d~~tG~~~w~~~~~~~~---~~~~~~~~~~~l~v~~~~g-~l~~~d 334 (376)
T 3q7m_A 288 ----------RVMALTIDGGVTLWTQSDLLHR---LLTSPVLYNGNLVVGDSEG-YLHWIN 334 (376)
T ss_dssp ----------CEEEEETTTCCEEEEECTTTTS---CCCCCEEETTEEEEECTTS-EEEEEE
T ss_pred ----------eEEEEECCCCcEEEeecccCCC---cccCCEEECCEEEEEeCCC-eEEEEE
Confidence 4899995 68888877633322 2334445688999998754 444444
No 121
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=98.93 E-value=2e-08 Score=96.35 Aligned_cols=169 Identities=9% Similarity=0.059 Sum_probs=105.5
Q ss_pred eEEEEEecCCCceeceEEcCCCcEEEEeCCC-ceEEEc-CCC-eEEEEeecCC----cccccccceEEcC----CCcEEE
Q 017520 108 TWVNWKFIDSQTLVGLTSTKEGHLIICDNAN-GLHKVS-EDG-VENFLSYVNG----SKLRFANDVVEAS----DGSLYF 176 (370)
Q Consensus 108 ~~~~~~~~~~~p~~gl~~d~~G~L~v~~~~~-gi~~~~-~~g-~~~~~~~~~g----~~~~~~~~l~~d~----~G~l~v 176 (370)
+++.+......|. +|+++++|+|||++... .|++++ .+| .+.+...... .....+.+|+++| +|.||+
T Consensus 18 ~~~~~a~~l~~P~-~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv 96 (454)
T 1cru_A 18 DKKVILSNLNKPH-ALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYI 96 (454)
T ss_dssp CEEEEECCCSSEE-EEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEE
T ss_pred EEEEEECCCCCce-EEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEE
Confidence 4556666667899 99999999999999775 499998 457 5544332111 0124566899998 689999
Q ss_pred EeCCCCCCCccceecccccCCCceEEEEeCCC--Ce---EEEEec-----CCCCccceEEccCCCEEEEEeC--------
Q 017520 177 TVSSSKYLPHEYCLDILEGKPHGQLLKYDPSS--NI---TTLVAD-----GFYFANGVALSRDEDYVVVCES-------- 238 (370)
Q Consensus 177 ~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t--~~---~~~~~~-----~~~~p~gi~~~~dg~~l~v~~~-------- 238 (370)
+.+...-.... .......+|+|++.+. .. .+++.. ...++++|++++||+ ||++.-
T Consensus 97 ~~s~~~~~~~~-----~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~-Lyv~~Gd~~~~~~~ 170 (454)
T 1cru_A 97 SGTFKNPKSTD-----KELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQK-IYYTIGDQGRNQLA 170 (454)
T ss_dssp EEEEECTTC-------CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSC-EEEEECCTTTTSGG
T ss_pred EEeccccCCCc-----cccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCe-EEEEECCCCCCCcc
Confidence 97520000000 0000134788887532 11 233332 245688999999998 999732
Q ss_pred -------------------------Cc-EEEEEeCCCC-CC-------ceeeeccCCCCCCCceeECCCCCEEEEEecCc
Q 017520 239 -------------------------WK-CRKYWLKGER-KG-------KLETFAENLPGAPDNINLAPDGTFWIAIIKLD 284 (370)
Q Consensus 239 -------------------------~~-l~~~~~~~~~-~~-------~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~~ 284 (370)
.+ |+|++.++.. .+ ..+.+...+ ..|.++++|++|+||++.++.+
T Consensus 171 ~~~~~~~~~~~p~~~~~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei~a~G~-RNp~gla~dp~G~L~~~d~g~~ 249 (454)
T 1cru_A 171 YLFLPNQAQHTPTQQELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYTLGH-RNPQGLAFTPNGKLLQSEQGPN 249 (454)
T ss_dssp GTTSCCCTTCCCCHHHHHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECSEEEBCC-SEEEEEEECTTSCEEEEEECSS
T ss_pred ccccccccccccccccccccCCCCCCeeEEEEeCCCCCCCCCCCCCCCcceEEEECC-CCcceEEECCCCCEEEEecCCC
Confidence 13 9999987641 01 123343222 2478899999999999998643
No 122
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.93 E-value=1e-06 Score=82.21 Aligned_cols=241 Identities=14% Similarity=0.116 Sum_probs=130.6
Q ss_pred eEecCCCcCCCcceEEcCCC-cEEEEec----------CCeEEEEe--CCeEE-EEEec-------CCCceeceEEcCCC
Q 017520 71 IKVGEGSVNHPEDASMDKNG-VIYTATR----------DGWIKRLQ--DGTWV-NWKFI-------DSQTLVGLTSTKEG 129 (370)
Q Consensus 71 ~~~~~~~~~~P~~i~~d~~G-~l~v~~~----------~g~I~~~~--~g~~~-~~~~~-------~~~p~~gl~~d~~G 129 (370)
..++.|. .|. +++++|| .+|+++. ++.|..|| +++.. .+.-. ...|. ++++++||
T Consensus 73 ~~I~vG~--~P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~-~~a~spDG 148 (386)
T 3sjl_D 73 GMIDGGF--LPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPW-MTSLTPDG 148 (386)
T ss_dssp EEEEECS--SCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGG-GEEECTTS
T ss_pred EEEECCC--CCc-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCc-eEEEcCCC
Confidence 4455553 686 9999988 5999872 45699999 56543 33222 23689 99999999
Q ss_pred c-EEEEeCC--CceEEEc-CCC--eEEEEeecCCcccccccc----eEEcCCCcEEEEeCCCCCCCccceecccccCCCc
Q 017520 130 H-LIICDNA--NGLHKVS-EDG--VENFLSYVNGSKLRFAND----VVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHG 199 (370)
Q Consensus 130 ~-L~v~~~~--~gi~~~~-~~g--~~~~~~~~~g~~~~~~~~----l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g 199 (370)
+ |||++.. +.|..+| .++ +..+ . .++...-.+.+ +++.+||++.+.+.. ..+
T Consensus 149 k~lyVan~~~~~~VsVID~~t~~vv~tI-~-v~g~~~~~P~g~~~~~~~~~DG~~~~v~~~----------------~~g 210 (386)
T 3sjl_D 149 KTLLFYQFSPAPAVGVVDLEGKAFKRML-D-VPDCYHIFPTAPDTFFMHCRDGSLAKVAFG----------------TEG 210 (386)
T ss_dssp SEEEEEECSSSCEEEEEETTTTEEEEEE-E-CCSEEEEEEEETTEEEEEETTSCEEEEECC----------------SSS
T ss_pred CEEEEEEcCCCCeEEEEECCCCcEEEEE-E-CCCcceeecCCCceeEEECCCCCEEEEECC----------------CCC
Confidence 5 8999753 5688888 666 3333 2 12211111211 244455543333321 112
Q ss_pred eEEEEeCCCCeEEEEecC--CCCccceEEc-cCCCEEEEEeCCcEEEEEeCCCCCCceee---ecc------CCCCCCCc
Q 017520 200 QLLKYDPSSNITTLVADG--FYFANGVALS-RDEDYVVVCESWKCRKYWLKGERKGKLET---FAE------NLPGAPDN 267 (370)
Q Consensus 200 ~l~~~d~~t~~~~~~~~~--~~~p~gi~~~-~dg~~l~v~~~~~l~~~~~~~~~~~~~~~---~~~------~~~g~p~~ 267 (370)
.+. +..+ ..... ....+..+++ ++|+.+|++..+.|+.+|..+........ +.. ..|+....
T Consensus 211 ~v~--~~~~----~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~ 284 (386)
T 3sjl_D 211 TPE--ITHT----EVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQ 284 (386)
T ss_dssp CCE--EEEC----CCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSC
T ss_pred eEE--Eeec----ceeccccccccccceeEcCCCcEEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcce
Confidence 221 0000 01110 1111223554 68876676664449999987653211111 110 01222234
Q ss_pred eeECCCC-CEEEEEecCchhHHHhhhcchhHHHHHHhCCccccccccCCCceEEEEECC-CCcEEEEEeCCCCCccccc-
Q 017520 268 INLAPDG-TFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAE-DGTIIRNLVDPTGQLMSFV- 344 (370)
Q Consensus 268 i~~d~~G-~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~-~g~~~~~~~~~~g~~~~~~- 344 (370)
+++++++ ++|++...+.. .- -..+...|..+|. .++++..+.... .+
T Consensus 285 ~a~~~~~~~lyV~~~~~~~----~~---------------------hk~~~~~V~viD~~t~kv~~~i~vg~-----~~~ 334 (386)
T 3sjl_D 285 VAYHRALDRIYLLVDQRDE----WR---------------------HKTASRFVVVLDAKTGERLAKFEMGH-----EID 334 (386)
T ss_dssp EEEETTTTEEEEEEEECCT----TC---------------------TTSCEEEEEEEETTTCCEEEEEEEEE-----EEC
T ss_pred eeECCCCCeEEEEeccccc----cc---------------------cCCCCCEEEEEECCCCeEEEEEECCC-----Ccc
Confidence 7888776 69999764210 00 0112356889995 688888876532 23
Q ss_pred eeEEEECC--EEEEEeCCCCeEEEEeC
Q 017520 345 TSGLQVDN--HLYVISLTSNFIGKVQL 369 (370)
Q Consensus 345 t~~~~~~g--~L~~gs~~~~~i~~~~~ 369 (370)
+.....++ .||.++..++.|.+++.
T Consensus 335 ~lavs~D~~~~ly~tn~~~~~VsViD~ 361 (386)
T 3sjl_D 335 SINVSQDEKPLLYALSTGDKTLYIHDA 361 (386)
T ss_dssp EEEECSSSSCEEEEEETTTTEEEEEET
T ss_pred eEEECCCCCeEEEEEcCCCCeEEEEEC
Confidence 33333443 58888888899998875
No 123
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.93 E-value=6.7e-07 Score=83.17 Aligned_cols=210 Identities=17% Similarity=0.179 Sum_probs=125.3
Q ss_pred CCcEEEEecCCeEEEEe--CCeEEEEEecCCCc------eeceEEcCCCcEEEEeCCCceEEEc-CCC-eEEEEeec--C
Q 017520 89 NGVIYTATRDGWIKRLQ--DGTWVNWKFIDSQT------LVGLTSTKEGHLIICDNANGLHKVS-EDG-VENFLSYV--N 156 (370)
Q Consensus 89 ~G~l~v~~~~g~I~~~~--~g~~~~~~~~~~~p------~~gl~~d~~G~L~v~~~~~gi~~~~-~~g-~~~~~~~~--~ 156 (370)
+|.+|+++.+|.|+.++ +|+........... . ...++ +|.+|++....+++.++ .+| ........ .
T Consensus 143 ~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~-~~~~~-~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~ 220 (376)
T 3q7m_A 143 DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGES-APTTA-FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQAT 220 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCC-CCEEE-TTEEEECCTTTEEEEEETTTCCEEEEEECCC--
T ss_pred CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCC-CcEEE-CCEEEEEcCCCEEEEEECCCCcEEEEEecccCC
Confidence 67999999999999999 78755433322111 2 34444 68899987667799999 678 43322211 0
Q ss_pred Cc----ccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecCCCCccceEEccCCCE
Q 017520 157 GS----KLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDY 232 (370)
Q Consensus 157 g~----~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~p~gi~~~~dg~~ 232 (370)
+. .+.......+..+|.+|++.. .+.|+.+|+++++...... .....++.++ ++.
T Consensus 221 ~~~~~~~~~~~~~~p~~~~~~v~~~~~------------------~g~l~~~d~~tG~~~w~~~-~~~~~~~~~~--~~~ 279 (376)
T 3q7m_A 221 GSTEIDRLSDVDTTPVVVNGVVFALAY------------------NGNLTALDLRSGQIMWKRE-LGSVNDFIVD--GNR 279 (376)
T ss_dssp ---------CCCCCCEEETTEEEEECT------------------TSCEEEEETTTCCEEEEEC-CCCEEEEEEE--TTE
T ss_pred CCcccccccccCCCcEEECCEEEEEec------------------CcEEEEEECCCCcEEeecc-CCCCCCceEE--CCE
Confidence 10 000011111123688999853 3689999998887643322 2233444443 456
Q ss_pred EEEEeCCc-EEEEEeCCCCCCceeeeccCCC-CCCCceeECCCCCEEEEEecCchhHHHhhhcchhHHHHHHhCCccccc
Q 017520 233 VVVCESWK-CRKYWLKGERKGKLETFAENLP-GAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQ 310 (370)
Q Consensus 233 l~v~~~~~-l~~~~~~~~~~~~~~~~~~~~~-g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (370)
+|++...+ |+.+|.++.+. .-.. .... .......+ .+|++|+++..+
T Consensus 280 l~~~~~~g~l~~~d~~tG~~--~w~~-~~~~~~~~~~~~~-~~~~l~v~~~~g--------------------------- 328 (376)
T 3q7m_A 280 IYLVDQNDRVMALTIDGGVT--LWTQ-SDLLHRLLTSPVL-YNGNLVVGDSEG--------------------------- 328 (376)
T ss_dssp EEEEETTCCEEEEETTTCCE--EEEE-CTTTTSCCCCCEE-ETTEEEEECTTS---------------------------
T ss_pred EEEEcCCCeEEEEECCCCcE--EEee-cccCCCcccCCEE-ECCEEEEEeCCC---------------------------
Confidence 99988776 99999765421 1111 1111 11222333 357899997654
Q ss_pred cccCCCceEEEEEC-CCCcEEEEEeCCCCCccccceeEEEECCEEEEEeCCCCe
Q 017520 311 FITLGGGAHLIHVA-EDGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNF 363 (370)
Q Consensus 311 ~~~~~~~g~v~~~~-~~g~~~~~~~~~~g~~~~~~t~~~~~~g~L~~gs~~~~~ 363 (370)
.++.+| .+|+++..+....+. ..+.....+++||+++.++..
T Consensus 329 --------~l~~~d~~tG~~~~~~~~~~~~---~~~~~~~~~~~l~v~~~~G~l 371 (376)
T 3q7m_A 329 --------YLHWINVEDGRFVAQQKVDSSG---FQTEPVAADGKLLIQAKDGTV 371 (376)
T ss_dssp --------EEEEEETTTCCEEEEEECCTTC---BCSCCEEETTEEEEEBTTSCE
T ss_pred --------eEEEEECCCCcEEEEEecCCCc---ceeCCEEECCEEEEEeCCCEE
Confidence 589999 479998888764332 233445568999999988763
No 124
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=98.92 E-value=2.1e-06 Score=78.83 Aligned_cols=230 Identities=9% Similarity=-0.046 Sum_probs=137.7
Q ss_pred CCcceEEcCCCcEE-EEecCCeEEEEe--CCe---EEEEEecCCCceeceEEcCCCcEEEEeCC-CceEEEc-CCC-eEE
Q 017520 80 HPEDASMDKNGVIY-TATRDGWIKRLQ--DGT---WVNWKFIDSQTLVGLTSTKEGHLIICDNA-NGLHKVS-EDG-VEN 150 (370)
Q Consensus 80 ~P~~i~~d~~G~l~-v~~~~g~I~~~~--~g~---~~~~~~~~~~p~~gl~~d~~G~L~v~~~~-~gi~~~~-~~g-~~~ 150 (370)
...+++++++|.+. +++.+|.|..|+ +++ ...+........ +++++++|+++++... +.|..++ .++ ...
T Consensus 10 ~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~ 88 (372)
T 1k8k_C 10 PISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVT-GVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKP 88 (372)
T ss_dssp CCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEE-EEEEETTTTEEEEEETTSCEEEEEEETTEEEE
T ss_pred CeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCccc-EEEEeCCCCEEEEEcCCCeEEEEECCCCeeee
Confidence 46778999888655 555899999999 564 334444455567 8999999986655434 4466666 555 322
Q ss_pred EEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCe----EEEEecC-CCCccceE
Q 017520 151 FLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNI----TTLVADG-FYFANGVA 225 (370)
Q Consensus 151 ~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~----~~~~~~~-~~~p~gi~ 225 (370)
.... .+ ....+..++++++|+..++.. .++.|..||.+++. ....... ......++
T Consensus 89 ~~~~-~~-~~~~v~~~~~~~~~~~l~~~~-----------------~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~ 149 (372)
T 1k8k_C 89 TLVI-LR-INRAARCVRWAPNEKKFAVGS-----------------GSRVISICYFEQENDWWVCKHIKKPIRSTVLSLD 149 (372)
T ss_dssp EEEC-CC-CSSCEEEEEECTTSSEEEEEE-----------------TTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEE
T ss_pred eEEe-ec-CCCceeEEEECCCCCEEEEEe-----------------CCCEEEEEEecCCCcceeeeeeecccCCCeeEEE
Confidence 2111 11 123578899999997665533 23566666655443 2222222 34567899
Q ss_pred EccCCCEEEEEeCCc-EEEEEeCCCC---------------CCceeeeccCCCCCCCceeECCCCCEEEEEecCchhHHH
Q 017520 226 LSRDEDYVVVCESWK-CRKYWLKGER---------------KGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMK 289 (370)
Q Consensus 226 ~~~dg~~l~v~~~~~-l~~~~~~~~~---------------~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~ 289 (370)
++++++.++.+...+ |..|++.... .+..........+....++++++|++.++....
T Consensus 150 ~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------ 223 (372)
T 1k8k_C 150 WHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHD------ 223 (372)
T ss_dssp ECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETT------
T ss_pred EcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCC------
Confidence 999999888777777 8889864210 111111111223345568889999755554332
Q ss_pred hhhcchhHHHHHHhCCccccccccCCCceEEEEECC-CCcEEEEEeCCCCCccccceeEEE-ECCEEEEEeCCCCeEEEE
Q 017520 290 ILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQ-VDNHLYVISLTSNFIGKV 367 (370)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~-~g~~~~~~~~~~g~~~~~~t~~~~-~~g~L~~gs~~~~~i~~~ 367 (370)
+.+..+|. .++.+..+....+ .+..+.. .++++..++ ....|..+
T Consensus 224 ----------------------------~~i~i~d~~~~~~~~~~~~~~~----~v~~~~~~~~~~~l~~~-~d~~i~i~ 270 (372)
T 1k8k_C 224 ----------------------------STVCLADADKKMAVATLASETL----PLLAVTFITESSLVAAG-HDCFPVLF 270 (372)
T ss_dssp ----------------------------TEEEEEEGGGTTEEEEEECSSC----CEEEEEEEETTEEEEEE-TTSSCEEE
T ss_pred ----------------------------CEEEEEECCCCceeEEEccCCC----CeEEEEEecCCCEEEEE-eCCeEEEE
Confidence 34677774 6788888765443 3444444 367766666 55555555
Q ss_pred e
Q 017520 368 Q 368 (370)
Q Consensus 368 ~ 368 (370)
+
T Consensus 271 ~ 271 (372)
T 1k8k_C 271 T 271 (372)
T ss_dssp E
T ss_pred E
Confidence 4
No 125
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.91 E-value=7.5e-07 Score=78.36 Aligned_cols=194 Identities=11% Similarity=0.124 Sum_probs=122.0
Q ss_pred CCceeceEEcCCC-cEEEE-eCCCceEEEcCCC--eEEEEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecc
Q 017520 117 SQTLVGLTSTKEG-HLIIC-DNANGLHKVSEDG--VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDI 192 (370)
Q Consensus 117 ~~p~~gl~~d~~G-~L~v~-~~~~gi~~~~~~g--~~~~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~ 192 (370)
..+. ||++++++ .||+. +....|++++.+| .+.+ . ..+ +..+.+|+++++|.+|+++..
T Consensus 27 ~~lS-Gla~~~~~~~L~aV~d~~~~I~~ld~~g~v~~~i-~-l~g--~~D~EGIa~~~~g~~~vs~E~------------ 89 (255)
T 3qqz_A 27 NNIS-SLTWSAQSNTLFSTINKPAAIVEMTTNGDLIRTI-P-LDF--VKDLETIEYIGDNQFVISDER------------ 89 (255)
T ss_dssp SCEE-EEEEETTTTEEEEEEETTEEEEEEETTCCEEEEE-E-CSS--CSSEEEEEECSTTEEEEEETT------------
T ss_pred cCcc-eeEEeCCCCEEEEEECCCCeEEEEeCCCCEEEEE-e-cCC--CCChHHeEEeCCCEEEEEECC------------
Confidence 4567 99999865 69985 4445799999667 3333 1 122 346788999999999999752
Q ss_pred cccCCCceEEEEeCCCCe-E---EEEecCC-CCc-----cceEEccCCCEEEEEeCCc---EEEEEeCCC-CCCceeeec
Q 017520 193 LEGKPHGQLLKYDPSSNI-T---TLVADGF-YFA-----NGVALSRDEDYVVVCESWK---CRKYWLKGE-RKGKLETFA 258 (370)
Q Consensus 193 ~~~~~~g~l~~~d~~t~~-~---~~~~~~~-~~p-----~gi~~~~dg~~l~v~~~~~---l~~~~~~~~-~~~~~~~~~ 258 (370)
.++++.++..... . ....-.+ ..+ .|++++++++.+|++.... |+.|+ +. .........
T Consensus 90 -----~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~--g~~~~~~l~i~~ 162 (255)
T 3qqz_A 90 -----DYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVN--GLLSSNELHISK 162 (255)
T ss_dssp -----TTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEE--STTCSSCCEEEE
T ss_pred -----CCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEc--ccccCCceeeec
Confidence 3567766543222 1 1111111 123 7999999998899987654 66666 31 111122110
Q ss_pred c-----C-CCCCCCceeECC-CCCEEEEEecCchhHHHhhhcchhHHHHHHhCCccccccccCCCceEEEEECCCCcEEE
Q 017520 259 E-----N-LPGAPDNINLAP-DGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIR 331 (370)
Q Consensus 259 ~-----~-~~g~p~~i~~d~-~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~g~~~~ 331 (370)
+ . .-.-+.++++|+ .|++|+-.... .+++++|.+|+++.
T Consensus 163 ~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s----------------------------------~~L~~~d~~g~~~~ 208 (255)
T 3qqz_A 163 DKALQRQFTLDDVSGAEFNQQKNTLLVLSHES----------------------------------RALQEVTLVGEVIG 208 (255)
T ss_dssp CHHHHHTCCSSCCCEEEEETTTTEEEEEETTT----------------------------------TEEEEECTTCCEEE
T ss_pred chhhccccccCCceeEEEcCCCCeEEEEECCC----------------------------------CeEEEEcCCCCEEE
Confidence 0 0 112367899987 55788887665 46999999999888
Q ss_pred EEeCCCCC-----ccccceeEEEE-CCEEEEEeCCCCeEEEEeC
Q 017520 332 NLVDPTGQ-----LMSFVTSGLQV-DNHLYVISLTSNFIGKVQL 369 (370)
Q Consensus 332 ~~~~~~g~-----~~~~~t~~~~~-~g~L~~gs~~~~~i~~~~~ 369 (370)
.+.-..|. .+.-.-.++.+ +|+|||.+ ..|.+.|+.-
T Consensus 209 ~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvs-E~n~~y~f~~ 251 (255)
T 3qqz_A 209 EMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVS-EPNRFYRFTP 251 (255)
T ss_dssp EEECSTTGGGCSSCCCSEEEEEECTTCCEEEEE-TTTEEEEEEC
T ss_pred EEEcCCccCCcccccCCCCeeEECCCCCEEEEc-CCceEEEEEe
Confidence 77665442 12233455555 58999996 4578888763
No 126
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=98.90 E-value=2.4e-06 Score=83.72 Aligned_cols=217 Identities=14% Similarity=0.152 Sum_probs=140.6
Q ss_pred CCcceEEcCCCcE-EEEecCCeEEEEe-CCe-EEEEEecCCCceeceEEcCCCcEEEEeCCCc-eEEEcCCC--eEEEEe
Q 017520 80 HPEDASMDKNGVI-YTATRDGWIKRLQ-DGT-WVNWKFIDSQTLVGLTSTKEGHLIICDNANG-LHKVSEDG--VENFLS 153 (370)
Q Consensus 80 ~P~~i~~d~~G~l-~v~~~~g~I~~~~-~g~-~~~~~~~~~~p~~gl~~d~~G~L~v~~~~~g-i~~~~~~g--~~~~~~ 153 (370)
...++++.++|.. .++..+|.|..++ +++ ...+......+. +++++++|+.++.....+ |..++.++ ...+..
T Consensus 346 ~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~~~~~~~~~~~~~v~-~~~~s~dg~~l~~~~~d~~v~~~~~~~~~~~~~~~ 424 (577)
T 2ymu_A 346 SVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVR-GVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTG 424 (577)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTCCEEEEEECCSSCEE-EEEECTTSSCEEEEETTSEEEEECTTCCEEEEEEC
T ss_pred CEEEEEECCCCCEEEEEeCCCEEEEEcCCCCEEEEecCCCCCeE-EEEECCCCCEEEEEeCCCEEEEEeCCCCEEEEecC
Confidence 4567888888864 4566888898888 665 344444455567 999999998655443444 55556555 443322
Q ss_pred ecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecCCCCccceEEccCCCEE
Q 017520 154 YVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYV 233 (370)
Q Consensus 154 ~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~p~gi~~~~dg~~l 233 (370)
. ...+..+++.+|++..++.+ .++.|..||..++....+.........+++++|++.+
T Consensus 425 ~-----~~~v~~~~~s~d~~~l~~~~-----------------~d~~v~~w~~~~~~~~~~~~~~~~v~~~~~spd~~~l 482 (577)
T 2ymu_A 425 H-----SSSVWGVAFSPDDQTIASAS-----------------DDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTI 482 (577)
T ss_dssp C-----SSCEEEEEECTTSSEEEEEE-----------------TTSEEEEEETTSCEEEEEECCSSCEEEEEECTTSCEE
T ss_pred C-----CCCeEEEEECCCCCEEEEEc-----------------CCCEEEEEECCCCEEEEEcCCCCCEEEEEEcCCCCEE
Confidence 1 13567899999998766643 3467888897755555554444556789999999977
Q ss_pred EEEeCCc-EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCCEEEEEecCchhHHHhhhcchhHHHHHHhCCccccccc
Q 017520 234 VVCESWK-CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFI 312 (370)
Q Consensus 234 ~v~~~~~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (370)
..+...+ |..|+.++. ....+. ...+....++++++|++.++....
T Consensus 483 as~~~d~~i~iw~~~~~---~~~~~~-~h~~~v~~l~~s~dg~~l~s~~~d----------------------------- 529 (577)
T 2ymu_A 483 ASASDDKTVKLWNRNGQ---LLQTLT-GHSSSVRGVAFSPDGQTIASASDD----------------------------- 529 (577)
T ss_dssp EEEETTSEEEEEETTSC---EEEEEE-CCSSCEEEEEECTTSSCEEEEETT-----------------------------
T ss_pred EEEeCCCEEEEEcCCCC---EEEEEe-CCCCCEEEEEEcCCCCEEEEEECc-----------------------------
Confidence 7777767 888885542 222232 233335668899999866654332
Q ss_pred cCCCceEEEEECCCCcEEEEEeCCCCCccccceeEEEE-CCE-EEEEeCCC
Q 017520 313 TLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQV-DNH-LYVISLTS 361 (370)
Q Consensus 313 ~~~~~g~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~-~g~-L~~gs~~~ 361 (370)
+.|..+|.+|+.+..+....+ .++.+... +|+ |.-++.++
T Consensus 530 -----g~v~lwd~~~~~~~~~~~h~~----~v~~~~fs~dg~~l~s~~~D~ 571 (577)
T 2ymu_A 530 -----KTVKLWNRNGQLLQTLTGHSS----SVWGVAFSPDGQTIASASSDK 571 (577)
T ss_dssp -----SEEEEECTTSCEEEEEECCSS----CEEEEEECTTSSCEEEEETTS
T ss_pred -----CEEEEEeCCCCEEEEEcCCCC----CEEEEEEcCCCCEEEEEeCCC
Confidence 457778888999888875443 45666654 344 54455443
No 127
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.88 E-value=1.9e-07 Score=86.87 Aligned_cols=74 Identities=12% Similarity=0.174 Sum_probs=53.5
Q ss_pred ceEEEEeCCCCeEEEEecCCCCccceEEccCCCEEEEEeCCc-EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCC
Q 017520 199 GQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWK-CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGT 275 (370)
Q Consensus 199 g~l~~~d~~t~~~~~~~~~~~~p~gi~~~~dg~~l~v~~~~~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~ 275 (370)
+.|+.||.+++++........ |.++++++||+.+|+++. + |.+||..+.++.....+. .....|.+++++++|+
T Consensus 286 ~~v~viD~~t~~~v~~i~~~~-p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~-~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 286 AEIWVMDTKTKQRVARIPGRD-ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIE-GAAEASLQVQFHPVGG 360 (361)
T ss_dssp SEEEEEETTTTEEEEEEECTT-CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEET-TSCSSEEEEEECCCSC
T ss_pred ceEEEEECCCCcEEEEEecCC-eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEec-cCCCCcEEEEecCCCC
Confidence 478889998887654443334 999999999999999987 6 999997654222222221 3345699999999985
No 128
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.87 E-value=5.3e-06 Score=74.83 Aligned_cols=178 Identities=12% Similarity=0.078 Sum_probs=112.6
Q ss_pred CCCcceEEcCCCcEEEEecCCeEEEEe--CCe----EEEEE--ecCCCceeceEEcCCCcEEE-EeCCCceEEEc-CCC-
Q 017520 79 NHPEDASMDKNGVIYTATRDGWIKRLQ--DGT----WVNWK--FIDSQTLVGLTSTKEGHLII-CDNANGLHKVS-EDG- 147 (370)
Q Consensus 79 ~~P~~i~~d~~G~l~v~~~~g~I~~~~--~g~----~~~~~--~~~~~p~~gl~~d~~G~L~v-~~~~~gi~~~~-~~g- 147 (370)
....++++.++|.+.++..+|.|..|+ +++ ...+. ....... .++++++|++++ +...+.|..++ .++
T Consensus 52 ~~v~~~~~~~~~~~l~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~d~~i~~~d~~~~~ 130 (337)
T 1gxr_A 52 EVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIR-SCKLLPDGCTLIVGGEASTLSIWDLAAPT 130 (337)
T ss_dssp SCCCEEEECSSSSEEEEECBSEEEEEETTSTTCCSCSEEEECSCTTSBEE-EEEECTTSSEEEEEESSSEEEEEECCCC-
T ss_pred CceEEEEEecCCcEEEEcCCCeEEEEECCCCCceeeeecccccCCCCcEE-EEEEcCCCCEEEEEcCCCcEEEEECCCCC
Confidence 356789999988766555599999999 332 23322 2334456 899999997544 44444566666 444
Q ss_pred eEEEEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecC-CCCccceEE
Q 017520 148 VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG-FYFANGVAL 226 (370)
Q Consensus 148 ~~~~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~-~~~p~gi~~ 226 (370)
....... .+ ....+..+++.++|+..++.. .++.|..||..+++....... ......+++
T Consensus 131 ~~~~~~~-~~-~~~~i~~~~~~~~~~~l~~~~-----------------~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~ 191 (337)
T 1gxr_A 131 PRIKAEL-TS-SAPACYALAISPDSKVCFSCC-----------------SDGNIAVWDLHNQTLVRQFQGHTDGASCIDI 191 (337)
T ss_dssp -EEEEEE-EC-SSSCEEEEEECTTSSEEEEEE-----------------TTSCEEEEETTTTEEEEEECCCSSCEEEEEE
T ss_pred cceeeec-cc-CCCceEEEEECCCCCEEEEEe-----------------CCCcEEEEeCCCCceeeeeecccCceEEEEE
Confidence 2222111 11 113567899999997655533 347899999887765444432 345678999
Q ss_pred ccCCCEEEEEeCCc-EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCCEEEEE
Q 017520 227 SRDEDYVVVCESWK-CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAI 280 (370)
Q Consensus 227 ~~dg~~l~v~~~~~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~ 280 (370)
+++++.++.+...+ |..|++...+. ...+ ...+....++++++|++.+..
T Consensus 192 ~~~~~~l~~~~~dg~i~~~d~~~~~~--~~~~--~~~~~v~~~~~s~~~~~l~~~ 242 (337)
T 1gxr_A 192 SNDGTKLWTGGLDNTVRSWDLREGRQ--LQQH--DFTSQIFSLGYCPTGEWLAVG 242 (337)
T ss_dssp CTTSSEEEEEETTSEEEEEETTTTEE--EEEE--ECSSCEEEEEECTTSSEEEEE
T ss_pred CCCCCEEEEEecCCcEEEEECCCCce--Eeee--cCCCceEEEEECCCCCEEEEE
Confidence 99999888888777 99999765421 1122 123345668888888755544
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.86 E-value=8e-07 Score=84.17 Aligned_cols=202 Identities=16% Similarity=0.118 Sum_probs=130.9
Q ss_pred CCcceEEcCCCc-EEEEecC---CeEEEEe--CCeEEEEEecCCCceeceEEcCCCc-EEEEeCC---CceEEEc-CCC-
Q 017520 80 HPEDASMDKNGV-IYTATRD---GWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGH-LIICDNA---NGLHKVS-EDG- 147 (370)
Q Consensus 80 ~P~~i~~d~~G~-l~v~~~~---g~I~~~~--~g~~~~~~~~~~~p~~gl~~d~~G~-L~v~~~~---~gi~~~~-~~g- 147 (370)
...++++.++|. |++++.+ ..|+.++ +|+...+....+... ++++++||+ |+++... ..|+.++ .++
T Consensus 180 ~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~-~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~ 258 (415)
T 2hqs_A 180 PLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNG-APAFSPDGSKLAFALSKTGSLNLYVMDLASGQ 258 (415)
T ss_dssp CEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEE-EEEECTTSSEEEEEECTTSSCEEEEEETTTCC
T ss_pred cceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCccc-CEEEcCCCCEEEEEEecCCCceEEEEECCCCC
Confidence 456678899986 4455544 4899999 677666655555667 899999997 5534332 2488888 556
Q ss_pred eEEEEeecCCcccccccceEEcCCCc-EEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecCCCCccceEE
Q 017520 148 VENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVAL 226 (370)
Q Consensus 148 ~~~~~~~~~g~~~~~~~~l~~d~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~p~gi~~ 226 (370)
...+... . ..+..++++|||+ |+++... .....|+.+|.++++.+.+.........+++
T Consensus 259 ~~~l~~~-~----~~~~~~~~spdg~~l~~~s~~---------------~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~ 318 (415)
T 2hqs_A 259 IRQVTDG-R----SNNTEPTWFPDSQNLAFTSDQ---------------AGRPQVYKVNINGGAPQRITWEGSQNQDADV 318 (415)
T ss_dssp EEECCCC-S----SCEEEEEECTTSSEEEEEECT---------------TSSCEEEEEETTSSCCEECCCSSSEEEEEEE
T ss_pred EEeCcCC-C----CcccceEECCCCCEEEEEECC---------------CCCcEEEEEECCCCCEEEEecCCCcccCeEE
Confidence 5433221 1 2456789999997 6655421 1234799999988776654433344567899
Q ss_pred ccCCCEEEEEeCC---c-EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCCE-EEEEecCchhHHHhhhcchhHHHHH
Q 017520 227 SRDEDYVVVCESW---K-CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTF-WIAIIKLDARRMKILNSSKLIKHVL 301 (370)
Q Consensus 227 ~~dg~~l~v~~~~---~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~l-wv~~~~~~~~~~~~~~~~~~~~~~~ 301 (370)
++||+.++++... . |+++++++.+ ...+... .....++++++|+. +.+...+
T Consensus 319 spdG~~l~~~~~~~g~~~i~~~d~~~~~---~~~l~~~--~~~~~~~~spdg~~l~~~s~~~------------------ 375 (415)
T 2hqs_A 319 SSDGKFMVMVSSNGGQQHIAKQDLATGG---VQVLSST--FLDETPSLAPNGTMVIYSSSQG------------------ 375 (415)
T ss_dssp CTTSSEEEEEEECSSCEEEEEEETTTCC---EEECCCS--SSCEEEEECTTSSEEEEEEEET------------------
T ss_pred CCCCCEEEEEECcCCceEEEEEECCCCC---EEEecCC--CCcCCeEEcCCCCEEEEEEcCC------------------
Confidence 9999988887753 2 9999987542 2333221 24566889999984 4443332
Q ss_pred HhCCccccccccCCCceEEEEECCCCcEEEEEeCCCCC
Q 017520 302 AAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQ 339 (370)
Q Consensus 302 ~~~~~~~~~~~~~~~~g~v~~~~~~g~~~~~~~~~~g~ 339 (370)
....|..+|.+|+..+.+....|.
T Consensus 376 --------------~~~~l~~~d~~g~~~~~l~~~~~~ 399 (415)
T 2hqs_A 376 --------------MGSVLNLVSTDGRFKARLPATDGQ 399 (415)
T ss_dssp --------------TEEEEEEEETTSCCEEECCCSSSE
T ss_pred --------------CccEEEEEECCCCcEEEeeCCCCC
Confidence 123578888888888877665553
No 130
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.84 E-value=4.1e-06 Score=79.87 Aligned_cols=176 Identities=11% Similarity=0.095 Sum_probs=109.2
Q ss_pred cceEEcCCCcEEEEecCCeEEEEe--CCe----EEEEEecC---------------------------------------
Q 017520 82 EDASMDKNGVIYTATRDGWIKRLQ--DGT----WVNWKFID--------------------------------------- 116 (370)
Q Consensus 82 ~~i~~d~~G~l~v~~~~g~I~~~~--~g~----~~~~~~~~--------------------------------------- 116 (370)
.+++++++|++.++..++.|..|+ +|+ +..+....
T Consensus 8 ~~v~~s~dg~~l~~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (450)
T 2vdu_B 8 QNLLTSRDGSLVFAIIKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDSIKRT 87 (450)
T ss_dssp CEEEECSSSSEEEEEETTEEEEEEEETTTEEEEEEEEECCC---------------------------------------
T ss_pred EEEEecCCCCEEEEEeCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcccccc
Confidence 568889999877777788999998 665 22232110
Q ss_pred ---------------CCceeceEEcCCCcEE-EEeCC-CceEEEc-C--CC--eEEEEeecCCcccccccceEEcCCCcE
Q 017520 117 ---------------SQTLVGLTSTKEGHLI-ICDNA-NGLHKVS-E--DG--VENFLSYVNGSKLRFANDVVEASDGSL 174 (370)
Q Consensus 117 ---------------~~p~~gl~~d~~G~L~-v~~~~-~gi~~~~-~--~g--~~~~~~~~~g~~~~~~~~l~~d~~G~l 174 (370)
+.+. +++++++|..+ ++... +.|..++ . ++ ...+..... ...+..++++++|+.
T Consensus 88 ~~~~~~~~~~~~~~~~~v~-~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~---~~~v~~~~~sp~~~~ 163 (450)
T 2vdu_B 88 AAKVPSPGLGAPPIYSYIR-NLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCF---SKRPNAISIAEDDTT 163 (450)
T ss_dssp ------------CCCCCEE-EEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEEC---SSCEEEEEECTTSSE
T ss_pred CccccCCCCCCCccCCceE-EEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccC---CCCceEEEEcCCCCE
Confidence 1355 89999999864 54433 4455555 4 55 444322111 135778999999975
Q ss_pred EEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEE-----EEecCCCCccceEEccC---CCEEEEEeCCc-EEEEE
Q 017520 175 YFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITT-----LVADGFYFANGVALSRD---EDYVVVCESWK-CRKYW 245 (370)
Q Consensus 175 ~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~-----~~~~~~~~p~gi~~~~d---g~~l~v~~~~~-l~~~~ 245 (370)
.++.. ..+.++.++..++... .+.........++++++ ++.++.+...+ |..|+
T Consensus 164 l~~~~-----------------~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd 226 (450)
T 2vdu_B 164 VIIAD-----------------KFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISH 226 (450)
T ss_dssp EEEEE-----------------TTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEE
T ss_pred EEEEe-----------------CCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEE
Confidence 54432 3477888887655432 12222334577899999 88777777777 99999
Q ss_pred eCCCCCCceeeeccCCCCCCCceeECCCCCEEEEEe
Q 017520 246 LKGERKGKLETFAENLPGAPDNINLAPDGTFWIAII 281 (370)
Q Consensus 246 ~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~ 281 (370)
+...+ ....+.....+....++++ +|++.++..
T Consensus 227 ~~~~~--~~~~~~~~h~~~v~~~~~s-d~~~l~s~~ 259 (450)
T 2vdu_B 227 YPQCF--IVDKWLFGHKHFVSSICCG-KDYLLLSAG 259 (450)
T ss_dssp ESCTT--CEEEECCCCSSCEEEEEEC-STTEEEEEE
T ss_pred CCCCc--eeeeeecCCCCceEEEEEC-CCCEEEEEe
Confidence 86542 1223222333445678888 887666554
No 131
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.84 E-value=1.7e-06 Score=76.37 Aligned_cols=169 Identities=13% Similarity=0.085 Sum_probs=102.1
Q ss_pred CcEEEEe---cCCeEEEEe--CCeEEEEEecCCCceeceEEcCCCcEEEEeCCCceEEEc-CC-C-eEEEEeecCCcccc
Q 017520 90 GVIYTAT---RDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGHLIICDNANGLHKVS-ED-G-VENFLSYVNGSKLR 161 (370)
Q Consensus 90 G~l~v~~---~~g~I~~~~--~g~~~~~~~~~~~p~~gl~~d~~G~L~v~~~~~gi~~~~-~~-g-~~~~~~~~~g~~~~ 161 (370)
|.+|.+. .++.|+.++ +++...+......+. +++++++|+.++......|+.++ .+ + ...+.. +....
T Consensus 10 ~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~v~-~~~~spdg~~l~~~~~~~i~~~d~~~~~~~~~~~~---~~~~~ 85 (297)
T 2ojh_A 10 TRLSTGPGGSMRSSIEIFNIRTRKMRVVWQTPELFE-APNWSPDGKYLLLNSEGLLYRLSLAGDPSPEKVDT---GFATI 85 (297)
T ss_dssp --------CCCCEEEEEEETTTTEEEEEEEESSCCE-EEEECTTSSEEEEEETTEEEEEESSSCCSCEECCC---TTCCC
T ss_pred eeEeecCCCCcceeEEEEeCCCCceeeeccCCcceE-eeEECCCCCEEEEEcCCeEEEEeCCCCCCceEecc---ccccc
Confidence 3445443 467788888 666666666666677 99999999866655566788888 66 6 443321 22224
Q ss_pred cccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecCCCCccceEEccCCCEEEEEe-CCc
Q 017520 162 FANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCE-SWK 240 (370)
Q Consensus 162 ~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~p~gi~~~~dg~~l~v~~-~~~ 240 (370)
.+..++++++|+..+..... ......|+.++.+++..+.+... .....+++++|++.++++. ..+
T Consensus 86 ~~~~~~~spdg~~l~~~~~~-------------~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~ 151 (297)
T 2ojh_A 86 CNNDHGISPDGALYAISDKV-------------EFGKSAIYLLPSTGGTPRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQ 151 (297)
T ss_dssp BCSCCEECTTSSEEEEEECT-------------TTSSCEEEEEETTCCCCEECCSS-SSEEEEEECTTSSEEEEEEEETT
T ss_pred cccceEECCCCCEEEEEEeC-------------CCCcceEEEEECCCCceEEeecC-CCccceEECCCCCEEEEEECCCC
Confidence 56789999999744443210 01346899999877766554332 3367789999999877544 334
Q ss_pred ---EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCC-EEEEE
Q 017520 241 ---CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGT-FWIAI 280 (370)
Q Consensus 241 ---l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~-lwv~~ 280 (370)
|+.++.++. ....+. .....+..++++++|+ ++++.
T Consensus 152 ~~~l~~~~~~~~---~~~~~~-~~~~~~~~~~~s~dg~~l~~~~ 191 (297)
T 2ojh_A 152 VFDIYSMDIDSG---VETRLT-HGEGRNDGPDYSPDGRWIYFNS 191 (297)
T ss_dssp EEEEEEEETTTC---CEEECC-CSSSCEEEEEECTTSSEEEEEE
T ss_pred ceEEEEEECCCC---cceEcc-cCCCccccceECCCCCEEEEEe
Confidence 555555432 222222 2233456688899997 44444
No 132
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.83 E-value=8.5e-06 Score=76.04 Aligned_cols=241 Identities=10% Similarity=0.034 Sum_probs=133.7
Q ss_pred EecCCCcCCCcceEEcCCC-cEEEEec----------CCeEEEEe--CCeEEEEEec--------CCCceeceEEcCCCc
Q 017520 72 KVGEGSVNHPEDASMDKNG-VIYTATR----------DGWIKRLQ--DGTWVNWKFI--------DSQTLVGLTSTKEGH 130 (370)
Q Consensus 72 ~~~~~~~~~P~~i~~d~~G-~l~v~~~----------~g~I~~~~--~g~~~~~~~~--------~~~p~~gl~~d~~G~ 130 (370)
.++.| ..| .+++++|| .+|+++. ++.|..++ +++....... ...|. ++++++||+
T Consensus 62 ~i~~g--~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~-~~~~spDG~ 137 (373)
T 2mad_H 62 HVNGG--FLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSW-MNANTPNNA 137 (373)
T ss_pred EecCC--CCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCcc-ceEECCCCC
Confidence 44445 368 99999988 6899862 46688999 4443322222 23588 999999995
Q ss_pred -EEEEeCC--CceEEEcCCCeEEEEeecCCcccccccceEEcCCC-cEEEEeCCCCCCCccceecccccCCCceEEEEeC
Q 017520 131 -LIICDNA--NGLHKVSEDGVENFLSYVNGSKLRFANDVVEASDG-SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDP 206 (370)
Q Consensus 131 -L~v~~~~--~gi~~~~~~g~~~~~~~~~g~~~~~~~~l~~d~~G-~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~ 206 (370)
||+++.. ..|..+| ...+......+ .+..+.+.++| +.|++.. .+|.+..+|.
T Consensus 138 ~l~v~n~~~~~~v~viD-~t~~~~~~~i~-----~~~~~~~~~~~~~~~~~~~-----------------~dg~~~~vd~ 194 (373)
T 2mad_H 138 DLLFFQFAAGPAVGLVV-QGGSSDDQLLS-----SPTCYHIHPGAPSTFYLLC-----------------AQGGLAKTDH 194 (373)
T ss_pred EEEEEecCCCCeEEEEE-CCCCEEeEEcC-----CCceEEEEeCCCceEEEEc-----------------CCCCEEEEEC
Confidence 8998753 4588888 43111111011 11123444554 5676643 4577888888
Q ss_pred CCCeEEEEec-----CCCCc--cceEEccCCCEEEEEeCCc-EEEEEeCCCCCCceeeec--c----CCCCCCCc---ee
Q 017520 207 SSNITTLVAD-----GFYFA--NGVALSRDEDYVVVCESWK-CRKYWLKGERKGKLETFA--E----NLPGAPDN---IN 269 (370)
Q Consensus 207 ~t~~~~~~~~-----~~~~p--~gi~~~~dg~~l~v~~~~~-l~~~~~~~~~~~~~~~~~--~----~~~g~p~~---i~ 269 (370)
+++...... ....| ....+++++..+|+....+ ++++|..+........+. . ...-.|.+ ++
T Consensus 195 -~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~ 273 (373)
T 2mad_H 195 -AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVA 273 (373)
T ss_pred -CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEE
Confidence 555432111 01111 2234556655555555555 888887653211111110 0 01113555 78
Q ss_pred ECCCC-CEEEEEecCchhHHHhhhcchhHHHHHHhCCccccccccCCCceEEEEECCC-CcEEEEEeCCCCCccccceeE
Q 017520 270 LAPDG-TFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAED-GTIIRNLVDPTGQLMSFVTSG 347 (370)
Q Consensus 270 ~d~~G-~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~-g~~~~~~~~~~g~~~~~~t~~ 347 (370)
++++| ++|++...+...- -....+.|..+|.+ ++++..+.... . .....
T Consensus 274 ~s~d~~~lyV~~~~~~~~~-------------------------~~~~~~~V~VID~~t~~vv~~i~~g~-~---p~~i~ 324 (373)
T 2mad_H 274 YLKSSDGIYLLTSEQSAWK-------------------------LHAAAKEVTSVTGLVGQTSSQISLGH-D---VDAIS 324 (373)
T ss_pred ECCCCCEEEEEeccCCccc-------------------------ccCCCCeEEEEECCCCEEEEEEECCC-C---cCeEE
Confidence 88887 5999875320000 00112458888965 67778885432 1 22233
Q ss_pred EEECC--EEEEEeCCCCeEEEEeC
Q 017520 348 LQVDN--HLYVISLTSNFIGKVQL 369 (370)
Q Consensus 348 ~~~~g--~L~~gs~~~~~i~~~~~ 369 (370)
...+| .+|+++...+.|.++++
T Consensus 325 ~s~Dg~~~l~v~~~~~~~V~ViD~ 348 (373)
T 2mad_H 325 VAQDGGPDLYALSAGTEVLHIYDA 348 (373)
T ss_pred ECCCCCeEEEEEcCCCCeEEEEEC
Confidence 33344 47777777899999886
No 133
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.83 E-value=2.6e-07 Score=85.31 Aligned_cols=143 Identities=11% Similarity=0.081 Sum_probs=95.1
Q ss_pred CCcceEEcC--CC--cEEEEecC---C--eEEEEe-CCeEEEEE-e----cCCCceeceEEcCCCcEEEEeCC-------
Q 017520 80 HPEDASMDK--NG--VIYTATRD---G--WIKRLQ-DGTWVNWK-F----IDSQTLVGLTSTKEGHLIICDNA------- 137 (370)
Q Consensus 80 ~P~~i~~d~--~G--~l~v~~~~---g--~I~~~~-~g~~~~~~-~----~~~~p~~gl~~d~~G~L~v~~~~------- 137 (370)
.|.+|.+.. +| +||+.+.. . .|++++ ++...++. . ...+|+ .++++++|++|+++..
T Consensus 113 ~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pN-D~~v~~~G~fyvt~~~~ftd~~~ 191 (355)
T 3sre_A 113 NPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVN-DIVAVGPEHFYATNDHYFIDPYL 191 (355)
T ss_dssp CEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEE-EEEEEETTEEEEEESCSCSSHHH
T ss_pred eeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCc-eEEEeCCCCEEecCCcEeCCccc
Confidence 788988854 45 68888733 2 366677 54433332 2 235688 9999999999998641
Q ss_pred -----------CceEEEcCCCeEEEEeecCCcccccccceEEcCCC-cEEEEeCCCCCCCccceecccccCCCceEEEEe
Q 017520 138 -----------NGLHKVSEDGVENFLSYVNGSKLRFANDVVEASDG-SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYD 205 (370)
Q Consensus 138 -----------~gi~~~~~~g~~~~~~~~~g~~~~~~~~l~~d~~G-~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d 205 (370)
++++++++...+.+... +..+|+|+++||| .+|++++. .++|++|+
T Consensus 192 ~~~e~~~~~~~g~vyr~d~~~~~~~~~~-----l~~pNGia~spDg~~lYvadt~-----------------~~~I~~~~ 249 (355)
T 3sre_A 192 KSWEMHLGLAWSFVTYYSPNDVRVVAEG-----FDFANGINISPDGKYVYIAELL-----------------AHKIHVYE 249 (355)
T ss_dssp HHHHHHTTCCCEEEEEECTTCCEEEEEE-----ESSEEEEEECTTSSEEEEEEGG-----------------GTEEEEEE
T ss_pred ccchhhccCCccEEEEEECCeEEEeecC-----CcccCcceECCCCCEEEEEeCC-----------------CCeEEEEE
Confidence 35888886334444332 4589999999999 69999873 46888887
Q ss_pred CC-CCeE---EEEecCCCCccceEEcc-CCCEEEEEe-CCc--EEEEEeC
Q 017520 206 PS-SNIT---TLVADGFYFANGVALSR-DEDYVVVCE-SWK--CRKYWLK 247 (370)
Q Consensus 206 ~~-t~~~---~~~~~~~~~p~gi~~~~-dg~~l~v~~-~~~--l~~~~~~ 247 (370)
.+ .+.. +.+ .-...|.|+++|+ +|+ +|++. .++ |.+|+++
T Consensus 250 ~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~-lwva~~~~g~~v~~~~P~ 297 (355)
T 3sre_A 250 KHANWTLTPLRVL-SFDTLVDNISVDPVTGD-LWVGCHPNGMRIFFYDAE 297 (355)
T ss_dssp ECTTSCEEEEEEE-ECSSEEEEEEECTTTCC-EEEEEESCHHHHHSCCTT
T ss_pred ECCCCcEecCEEE-eCCCCCceEEEeCCCCc-EEEEecCCceEEEEECCC
Confidence 54 2332 222 2235789999999 598 88854 343 5555543
No 134
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=98.78 E-value=1.3e-06 Score=81.04 Aligned_cols=225 Identities=11% Similarity=0.023 Sum_probs=143.9
Q ss_pred CCcceEEc-CCCcEEEEec---CC---eEEEEe-C---C------eE-EEEEe--cC---CCceeceEEcCCCcEEEEeC
Q 017520 80 HPEDASMD-KNGVIYTATR---DG---WIKRLQ-D---G------TW-VNWKF--ID---SQTLVGLTSTKEGHLIICDN 136 (370)
Q Consensus 80 ~P~~i~~d-~~G~l~v~~~---~g---~I~~~~-~---g------~~-~~~~~--~~---~~p~~gl~~d~~G~L~v~~~ 136 (370)
-|.+|++| .+|++|++-. .| .|..+. + + .+ +.|.. .+ -.+. ++.+|+.|+|||.|.
T Consensus 27 ~P~gv~vd~~~gRiFvt~PR~~~gvp~TL~~v~~~~~~~~~~~~p~ll~PYP~w~~~~~lvsV~-~v~iD~~~rLWVLDt 105 (381)
T 3q6k_A 27 ISTAFAYDAEGEKLFLAVPRKLPRVPYTLAEVDTKNSLGVKGKHSPLLNKFSGHKTGKELTSIY-QPVIDDCRRLWVVDI 105 (381)
T ss_dssp CCCEEEEETTTTEEEEECCTTSTTCSCSEEEEEHHHHTTCTTCSSCCBEECTTCSSSCSSSCEE-EEEECTTCEEEEEEC
T ss_pred ceeeeeeecCCCcEEEEeCCCCCCCCcEEEEEeCCCCcccccCCcccccCCCCCccccceEEee-EEEEcCCCcEEEEeC
Confidence 48889995 8999999982 22 455665 2 1 34 55532 12 2467 899999999999986
Q ss_pred CC----------------ceEEEc-C-C--C-eEEEEe-ecCCcccccccceEEc-C-------CCcEEEEeCCCCCCCc
Q 017520 137 AN----------------GLHKVS-E-D--G-VENFLS-YVNGSKLRFANDVVEA-S-------DGSLYFTVSSSKYLPH 186 (370)
Q Consensus 137 ~~----------------gi~~~~-~-~--g-~~~~~~-~~~g~~~~~~~~l~~d-~-------~G~l~v~d~~~~~~~~ 186 (370)
+. .|+.+| . + . ++.+.- ...-.+..+.++|++| . ++.+||+|..
T Consensus 106 G~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~------ 179 (381)
T 3q6k_A 106 GSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFL------ 179 (381)
T ss_dssp SSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETT------
T ss_pred CCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCC------
Confidence 51 266777 3 4 3 333321 1111123578899999 2 4679999973
Q ss_pred cceecccccCCCceEEEEeCCCCeEEEEecCC-------------------CCccceEEccC----CCEEEEEeCCc--E
Q 017520 187 EYCLDILEGKPHGQLLKYDPSSNITTLVADGF-------------------YFANGVALSRD----EDYVVVCESWK--C 241 (370)
Q Consensus 187 ~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~-------------------~~p~gi~~~~d----g~~l~v~~~~~--l 241 (370)
.++|++||..+++...+.+.. ....||+++++ ++.||+.-..+ +
T Consensus 180 -----------~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~l 248 (381)
T 3q6k_A 180 -----------RGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKV 248 (381)
T ss_dssp -----------TTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEE
T ss_pred -----------CCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCcE
Confidence 467888888877665554211 24568999998 88999998777 7
Q ss_pred EEEEe---CCCC-CCceeeeccCCCCCCC--ceeEC-CCCCEEEEEecCchhHHHhhhcchhHHHHHHhCCccccccccC
Q 017520 242 RKYWL---KGER-KGKLETFAENLPGAPD--NINLA-PDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITL 314 (370)
Q Consensus 242 ~~~~~---~~~~-~~~~~~~~~~~~g~p~--~i~~d-~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (370)
+++.. ..+. ...++.+.+ .+...+ ++++| ++|++|++....
T Consensus 249 y~V~T~~L~~~~~~~~v~~~G~-kg~~s~~~~~~~D~~~G~ly~~~~~~------------------------------- 296 (381)
T 3q6k_A 249 YSVNTKELKQKGGKLNPELLGN-RGKYNDAIALAYDPKTKVIFFAEANT------------------------------- 296 (381)
T ss_dssp EEEEHHHHSSTTCCCCCEEEEE-CCTTCCEEEEEECTTTCEEEEEESSS-------------------------------
T ss_pred EEEEHHHhhCcchhhceEEeee-cCCCCCcceEEEeCCCCeEEEEeccC-------------------------------
Confidence 77762 2221 223333332 221234 35676 899999998764
Q ss_pred CCceEEEEECCCC-c-----EEEEEeCCCCCccccceeEEEE-CCEEEEEeCC
Q 017520 315 GGGAHLIHVAEDG-T-----IIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLT 360 (370)
Q Consensus 315 ~~~g~v~~~~~~g-~-----~~~~~~~~~g~~~~~~t~~~~~-~g~L~~gs~~ 360 (370)
..|.+.++++ . ....++++ . +.+++.+... +|+||+-+-.
T Consensus 297 ---~aI~~w~~~~~~~~~~n~~~l~~d~-~--l~~pd~~~i~~~g~Lwv~sn~ 343 (381)
T 3q6k_A 297 ---KQVSCWNTQKMPLRMKNTDVVYTSS-R--FVFGTDISVDSKGGLWFMSNG 343 (381)
T ss_dssp ---SEEEEEETTSCSBCGGGEEEEEECT-T--CCSEEEEEECTTSCEEEEECS
T ss_pred ---CeEEEEeCCCCccccCceEEEEECC-C--ccccCeEEECCCCeEEEEECc
Confidence 4689999887 2 34455665 2 4466777654 6899998744
No 135
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.77 E-value=4.5e-06 Score=78.98 Aligned_cols=157 Identities=17% Similarity=0.164 Sum_probs=101.2
Q ss_pred CeEEEEe-CC-eEEEEEecCCCceeceEEcCCCc-EEEEeCCC---ceEEEc-CCC-eEEEEeecCCcccccccceEEcC
Q 017520 99 GWIKRLQ-DG-TWVNWKFIDSQTLVGLTSTKEGH-LIICDNAN---GLHKVS-EDG-VENFLSYVNGSKLRFANDVVEAS 170 (370)
Q Consensus 99 g~I~~~~-~g-~~~~~~~~~~~p~~gl~~d~~G~-L~v~~~~~---gi~~~~-~~g-~~~~~~~~~g~~~~~~~~l~~d~ 170 (370)
+.|+.++ ++ ....+........ ++++++||+ |+.+.... .|+.++ .+| ...+... . ..+..++++|
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~~~v~-~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~-~----~~~~~~~~sp 232 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSPQPLM-SPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASF-P----RHNGAPAFSP 232 (415)
T ss_dssp EEEEEEETTSCSCEEEEEESSCEE-EEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECC-S----SCEEEEEECT
T ss_pred ceEEEEcCCCCCCEEEeCCCCcce-eeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecC-C----CcccCEEEcC
Confidence 6888888 54 4555555556677 899999997 44444332 577788 566 5444321 1 2567889999
Q ss_pred CCc-EEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecCCCCccceEEccCCCEEEEEeC-Cc---EEEEE
Q 017520 171 DGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCES-WK---CRKYW 245 (370)
Q Consensus 171 ~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~p~gi~~~~dg~~l~v~~~-~~---l~~~~ 245 (370)
||+ |+++.+. .....|+.+|.++++...+.........++++|||+.++++.. .+ |++++
T Consensus 233 dg~~la~~~~~---------------~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d 297 (415)
T 2hqs_A 233 DGSKLAFALSK---------------TGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVN 297 (415)
T ss_dssp TSSEEEEEECT---------------TSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred CCCEEEEEEec---------------CCCceEEEEECCCCCEEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEE
Confidence 997 6656431 1345799999988877665544445677899999998877764 33 88888
Q ss_pred eCCCCCCceeeeccCCCCCCCceeECCCCCEEEEE
Q 017520 246 LKGERKGKLETFAENLPGAPDNINLAPDGTFWIAI 280 (370)
Q Consensus 246 ~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~ 280 (370)
+++.+ ...+. ........++++++|++.+..
T Consensus 298 ~~~~~---~~~l~-~~~~~~~~~~~spdG~~l~~~ 328 (415)
T 2hqs_A 298 INGGA---PQRIT-WEGSQNQDADVSSDGKFMVMV 328 (415)
T ss_dssp TTSSC---CEECC-CSSSEEEEEEECTTSSEEEEE
T ss_pred CCCCC---EEEEe-cCCCcccCeEECCCCCEEEEE
Confidence 76542 22222 112233457889999744443
No 136
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=98.77 E-value=7.2e-06 Score=74.87 Aligned_cols=180 Identities=13% Similarity=0.017 Sum_probs=111.8
Q ss_pred CCcceEEcCCCc-EEEEecCCeEEEEe--CCeEEEEEecCCCceeceEEcCCCcEEEEeCC------CceEEEc-CCC--
Q 017520 80 HPEDASMDKNGV-IYTATRDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGHLIICDNA------NGLHKVS-EDG-- 147 (370)
Q Consensus 80 ~P~~i~~d~~G~-l~v~~~~g~I~~~~--~g~~~~~~~~~~~p~~gl~~d~~G~L~v~~~~------~gi~~~~-~~g-- 147 (370)
...+++++++|. |++++.+|.|..|+ +++..........+. .++++++|..+++... +.+..++ ..+
T Consensus 76 ~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~ 154 (369)
T 3zwl_B 76 TIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWKSPVPVK-RVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSA 154 (369)
T ss_dssp CEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSCEE-EEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTT
T ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCeE-EEEEccCCCEEEEecCCccCCCCEEEEEEecCCcc
Confidence 456788888775 55666899999999 565444444555667 9999999986655433 3455555 222
Q ss_pred eEEEEeecC--------CcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCC-CeEEE-EecC
Q 017520 148 VENFLSYVN--------GSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSS-NITTL-VADG 217 (370)
Q Consensus 148 ~~~~~~~~~--------g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t-~~~~~-~~~~ 217 (370)
...+..... ......+..++++++|+..++.. .++.|..||..+ +.... +...
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----------------~dg~i~i~d~~~~~~~~~~~~~~ 217 (369)
T 3zwl_B 155 THELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGH-----------------KDGKISKYDVSNNYEYVDSIDLH 217 (369)
T ss_dssp TCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEE-----------------TTSEEEEEETTTTTEEEEEEECC
T ss_pred ceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEc-----------------CCCEEEEEECCCCcEeEEEEecC
Confidence 111111000 00112567889999997655532 357899999886 34333 3333
Q ss_pred CCCccceEEccCCCEEEEEeCCc-EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCCEEEEEe
Q 017520 218 FYFANGVALSRDEDYVVVCESWK-CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAII 281 (370)
Q Consensus 218 ~~~p~gi~~~~dg~~l~v~~~~~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~ 281 (370)
......++++++++.++.+...+ |..||+...+ ....+. .......++++++|.+.+...
T Consensus 218 ~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~--~~~~~~--~~~~~~~~~~~~~~~~l~~~~ 278 (369)
T 3zwl_B 218 EKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQ--VLKKYE--TDCPLNTAVITPLKEFIILGG 278 (369)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC--EEEEEE--CSSCEEEEEECSSSSEEEEEE
T ss_pred CCceeEEEECCCCCEEEEecCCceEEEEECCCCc--eeeeec--CCCCceeEEecCCCceEEEee
Confidence 44567899999999888887777 9999976532 122222 223355688899887555543
No 137
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.76 E-value=3.5e-06 Score=79.48 Aligned_cols=188 Identities=9% Similarity=0.046 Sum_probs=112.0
Q ss_pred CcEEEEe-cCCeEEEEe--CC----eEEEEEe-------cC-CCceeceEEcCCCcEEEEeCC-------CceEEEc-CC
Q 017520 90 GVIYTAT-RDGWIKRLQ--DG----TWVNWKF-------ID-SQTLVGLTSTKEGHLIICDNA-------NGLHKVS-ED 146 (370)
Q Consensus 90 G~l~v~~-~~g~I~~~~--~g----~~~~~~~-------~~-~~p~~gl~~d~~G~L~v~~~~-------~gi~~~~-~~ 146 (370)
.+||+.. .+++|+.+| .. ++..... .+ .+|+ ++...++| +||+..+ +++..+| ++
T Consensus 96 ~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph-~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T 173 (462)
T 2ece_A 96 RFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLH-TVHCGPDA-IYISALGNEEGEGPGGILMLDHYS 173 (462)
T ss_dssp CEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEE-EEEECSSC-EEEEEEEETTSCSCCEEEEECTTT
T ss_pred CEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCccc-ceeECCCe-EEEEcCCCcCCCCCCeEEEEECCC
Confidence 4788877 678899999 22 3333331 12 3789 99999999 9997543 3699999 55
Q ss_pred C-eEEEEeecCCcccccccceEEcCCCcEEEEeCCCCCCCcc-----ceecccccCCCceEEEEeCCCCeEEEEecC---
Q 017520 147 G-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHE-----YCLDILEGKPHGQLLKYDPSSNITTLVADG--- 217 (370)
Q Consensus 147 g-~~~~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~-----~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~--- 217 (370)
+ +..-... .+.+..+..++.+.++++++++.. |+... +....++.....+|..||.++++......-
T Consensus 174 ~~v~~~~~~-~~~~~~~~Yd~~~~p~~~~mvsS~---wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~ 249 (462)
T 2ece_A 174 FEPLGKWEI-DRGDQYLAYDFWWNLPNEVLVSSE---WAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEE 249 (462)
T ss_dssp CCEEEECCS-BCTTCCCCCCEEEETTTTEEEECB---CCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTT
T ss_pred CeEEEEEcc-CCCCccccceEEECCCCCEEEEcc---CcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCC
Confidence 5 3222111 222334567888899998766643 22110 111111113467899999987754332221
Q ss_pred CCCccceEE--ccCCCEEEEEeC-----Cc--EEEEEeCCCCCCceee-------eccCC----------CCCCCceeEC
Q 017520 218 FYFANGVAL--SRDEDYVVVCES-----WK--CRKYWLKGERKGKLET-------FAENL----------PGAPDNINLA 271 (370)
Q Consensus 218 ~~~p~gi~~--~~dg~~l~v~~~-----~~--l~~~~~~~~~~~~~~~-------~~~~~----------~g~p~~i~~d 271 (370)
...|..+.+ +++++..|++.. .. |++|..++........ +...+ ++.|.+|.++
T Consensus 250 g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS 329 (462)
T 2ece_A 250 NRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDIS 329 (462)
T ss_dssp EEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEEC
T ss_pred CCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEEC
Confidence 135666766 999999999875 43 7665544321111111 00011 3568899999
Q ss_pred CCCC-EEEEEecC
Q 017520 272 PDGT-FWIAIIKL 283 (370)
Q Consensus 272 ~~G~-lwv~~~~~ 283 (370)
+||+ ||+++.+.
T Consensus 330 ~DGrfLYVSnrg~ 342 (462)
T 2ece_A 330 LDDKFLYLSLWGI 342 (462)
T ss_dssp TTSCEEEEEETTT
T ss_pred CCCCEEEEEeCCC
Confidence 9996 88887654
No 138
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=98.75 E-value=1.6e-06 Score=80.51 Aligned_cols=184 Identities=14% Similarity=0.089 Sum_probs=117.1
Q ss_pred CcceEEcCCCcE-EEEe--cCCeEEEEe--CCeEEEEEecCCCceeceEEcCCCcEEEEeCCCceEEEc-CCC-eEEEEe
Q 017520 81 PEDASMDKNGVI-YTAT--RDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGHLIICDNANGLHKVS-EDG-VENFLS 153 (370)
Q Consensus 81 P~~i~~d~~G~l-~v~~--~~g~I~~~~--~g~~~~~~~~~~~p~~gl~~d~~G~L~v~~~~~gi~~~~-~~g-~~~~~~ 153 (370)
...+++.+||.+ .+++ .++.|..|+ +++........+... ++++++||.++++....++..++ .++ ......
T Consensus 136 ~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~~V~-~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~~ 214 (365)
T 4h5i_A 136 TKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIETRGEVK-DLHFSTDGKVVAYITGSSLEVISTVTGSCIARKT 214 (365)
T ss_dssp EEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEECSSCCC-EEEECTTSSEEEEECSSCEEEEETTTCCEEEEEC
T ss_pred EEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCCCceE-EEEEccCCceEEeccceeEEEEEeccCcceeeee
Confidence 456899999965 4555 578899999 666544444556677 99999999988876667888888 556 221111
Q ss_pred ecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEE-----EecCCCCccceEEcc
Q 017520 154 YVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTL-----VADGFYFANGVALSR 228 (370)
Q Consensus 154 ~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~-----~~~~~~~p~gi~~~~ 228 (370)
..+ ....+..+++.++|+..++.+.. ......++.++........ +.........++++|
T Consensus 215 -~~~-~~~~v~~v~fspdg~~l~~~s~d-------------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Sp 279 (365)
T 4h5i_A 215 -DFD-KNWSLSKINFIADDTVLIAASLK-------------KGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDM 279 (365)
T ss_dssp -CCC-TTEEEEEEEEEETTEEEEEEEES-------------SSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECT
T ss_pred -cCC-CCCCEEEEEEcCCCCEEEEEecC-------------CcceeEEeecccccceecceeeeeecCCCCCeEeEEECC
Confidence 111 12356789999999877664320 0011245666655443322 223334457899999
Q ss_pred CCCEEEEEeCCc-EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCCEEEEEec
Q 017520 229 DEDYVVVCESWK-CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 282 (370)
Q Consensus 229 dg~~l~v~~~~~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~ 282 (370)
||+.|..+...+ |..||+...+ ....+.....+....+++++||++.++...
T Consensus 280 dg~~lasgs~D~~V~iwd~~~~~--~~~~~~~gH~~~V~~v~fSpdg~~laS~S~ 332 (365)
T 4h5i_A 280 KGELAVLASNDNSIALVKLKDLS--MSKIFKQAHSFAITEVTISPDSTYVASVSA 332 (365)
T ss_dssp TSCEEEEEETTSCEEEEETTTTE--EEEEETTSSSSCEEEEEECTTSCEEEEEET
T ss_pred CCCceEEEcCCCEEEEEECCCCc--EEEEecCcccCCEEEEEECCCCCEEEEEeC
Confidence 999877777777 9999976432 122232233344567899999997777544
No 139
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=98.74 E-value=3e-05 Score=70.94 Aligned_cols=182 Identities=12% Similarity=0.086 Sum_probs=113.5
Q ss_pred CCcCCCcceEEcCCCc-EEEEecCCeEEEEe--CCe-EEEEEecCCCceeceEEcCCCcEEEEeCCCc-eEEEc-CCC--
Q 017520 76 GSVNHPEDASMDKNGV-IYTATRDGWIKRLQ--DGT-WVNWKFIDSQTLVGLTSTKEGHLIICDNANG-LHKVS-EDG-- 147 (370)
Q Consensus 76 ~~~~~P~~i~~d~~G~-l~v~~~~g~I~~~~--~g~-~~~~~~~~~~p~~gl~~d~~G~L~v~~~~~g-i~~~~-~~g-- 147 (370)
+....-.++++.++|. |..++.+|.|..|+ +++ ...+........ .++++++|++.++....+ +..++ .++
T Consensus 53 gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~-~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~ 131 (340)
T 1got_B 53 GHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVM-TCAYAPSGNYVACGGLDNICSIYNLKTREG 131 (340)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEE-EEEECTTSSEEEEEETTCEEEEEETTTCSB
T ss_pred CCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEE-EEEECCCCCEEEEEeCCCeEEEEECccCCC
Confidence 4344567788988886 45566899999999 554 334444444566 899999998766544444 44444 322
Q ss_pred -eEEEEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecC-CCCccceE
Q 017520 148 -VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG-FYFANGVA 225 (370)
Q Consensus 148 -~~~~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~-~~~p~gi~ 225 (370)
.+... ...+. ...+..+.+.+++.+..+. .++.|..||..+++......+ ......++
T Consensus 132 ~~~~~~-~~~~h-~~~v~~~~~~~~~~l~s~s------------------~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~ 191 (340)
T 1got_B 132 NVRVSR-ELAGH-TGYLSCCRFLDDNQIVTSS------------------GDTTCALWDIETGQQTTTFTGHTGDVMSLS 191 (340)
T ss_dssp SCEEEE-EEECC-SSCEEEEEEEETTEEEEEE------------------TTSCEEEEETTTTEEEEEECCCSSCEEEEE
T ss_pred cceeEE-EecCC-CccEEEEEECCCCcEEEEE------------------CCCcEEEEECCCCcEEEEEcCCCCceEEEE
Confidence 22221 11221 1345667777777765543 347899999887766544433 33457899
Q ss_pred EccCCCEEEEEeCCc-EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCCEEEEEe
Q 017520 226 LSRDEDYVVVCESWK-CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAII 281 (370)
Q Consensus 226 ~~~dg~~l~v~~~~~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~ 281 (370)
++++++.++.+...+ |..||+.... ....+. ........++++++|++.++..
T Consensus 192 ~~~~~~~l~sg~~d~~v~~wd~~~~~--~~~~~~-~h~~~v~~v~~~p~~~~l~s~s 245 (340)
T 1got_B 192 LAPDTRLFVSGACDASAKLWDVREGM--CRQTFT-GHESDINAICFFPNGNAFATGS 245 (340)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTCS--EEEEEC-CCSSCEEEEEECTTSSEEEEEE
T ss_pred ECCCCCEEEEEeCCCcEEEEECCCCe--eEEEEc-CCcCCEEEEEEcCCCCEEEEEc
Confidence 999999776666666 8889876432 122222 2333456688999998666554
No 140
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.74 E-value=1.3e-06 Score=82.40 Aligned_cols=187 Identities=13% Similarity=0.118 Sum_probs=110.5
Q ss_pred cCCCcceEEcCCCcEEEEe-cC------CeEEEEe--CCeEEEEEecC----CCceeceEEcCCCcEEEEeC--------
Q 017520 78 VNHPEDASMDKNGVIYTAT-RD------GWIKRLQ--DGTWVNWKFID----SQTLVGLTSTKEGHLIICDN-------- 136 (370)
Q Consensus 78 ~~~P~~i~~d~~G~l~v~~-~~------g~I~~~~--~g~~~~~~~~~----~~p~~gl~~d~~G~L~v~~~-------- 136 (370)
...|+.+...++| ||++. .+ |+|..+| ++++..-.... +.++ .+.+.++++.+++..
T Consensus 137 ~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Y-d~~~~p~~~~mvsS~wg~p~~~~ 214 (462)
T 2ece_A 137 YSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAY-DFWWNLPNEVLVSSEWAVPNTIE 214 (462)
T ss_dssp EEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCC-CEEEETTTTEEEECBCCCHHHHT
T ss_pred CCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccc-eEEECCCCCEEEEccCcCccccc
Confidence 4579999999999 99866 32 6899999 46644332222 2244 567788888655542
Q ss_pred ------------CCceEEEc-CCC-eEEEEeecCCcccccccceEE--cCCC-cEEEEeCCCCCCCccceecccccCCCc
Q 017520 137 ------------ANGLHKVS-EDG-VENFLSYVNGSKLRFANDVVE--ASDG-SLYFTVSSSKYLPHEYCLDILEGKPHG 199 (370)
Q Consensus 137 ------------~~gi~~~~-~~g-~~~~~~~~~g~~~~~~~~l~~--d~~G-~l~v~d~~~~~~~~~~~~~~~~~~~~g 199 (370)
.+.|..++ .++ ...... .+.....+..|.+ +++| .+|++..-+ -...++
T Consensus 215 ~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~--vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~------------~~~Lss 280 (462)
T 2ece_A 215 DGLKLEHLKDRYGNRIHFWDLRKRKRIHSLT--LGEENRMALELRPLHDPTKLMGFINMVVS------------LKDLSS 280 (462)
T ss_dssp TCCCTTTHHHHSCCEEEEEETTTTEEEEEEE--SCTTEEEEEEEEECSSTTCCEEEEEEEEE------------TTTCCE
T ss_pred cccchhhhhhccCCEEEEEECCCCcEeeEEe--cCCCCCccceeEeeECCCCCEEEEEEeee------------ccCCCc
Confidence 35688888 555 222112 1211234566666 8998 488875400 000123
Q ss_pred eEEEEeCCCCeEEEEe-----c-----C-----------CCCccceEEccCCCEEEEEeCCc--EEEEEeCCCCCCc-ee
Q 017520 200 QLLKYDPSSNITTLVA-----D-----G-----------FYFANGVALSRDEDYVVVCESWK--CRKYWLKGERKGK-LE 255 (370)
Q Consensus 200 ~l~~~d~~t~~~~~~~-----~-----~-----------~~~p~gi~~~~dg~~l~v~~~~~--l~~~~~~~~~~~~-~~ 255 (370)
.|+++..+.+.++... . . ...|.+|.+++||++||+++.+. |.+|++..+...+ ..
T Consensus 281 ~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~ 360 (462)
T 2ece_A 281 SIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTG 360 (462)
T ss_dssp EEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEE
T ss_pred eEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEE
Confidence 4443332223322111 0 0 24578999999999999999987 9999986432111 11
Q ss_pred ee-cc------------CCCCCCCceeECCCCC-EEEEE
Q 017520 256 TF-AE------------NLPGAPDNINLAPDGT-FWIAI 280 (370)
Q Consensus 256 ~~-~~------------~~~g~p~~i~~d~~G~-lwv~~ 280 (370)
.+ .. ...+.|.++++++||+ +|++.
T Consensus 361 ~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 361 KVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp EEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred EEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 11 11 1223599999999996 77764
No 141
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=98.74 E-value=8.6e-06 Score=76.29 Aligned_cols=171 Identities=13% Similarity=0.081 Sum_probs=107.2
Q ss_pred EEcCCCc-EEEEecCCeEEEEe--CCeEEEEE-ecCCCceeceEEcCCCcEEEEeCC-CceEEEc-CCC--eEEEEeecC
Q 017520 85 SMDKNGV-IYTATRDGWIKRLQ--DGTWVNWK-FIDSQTLVGLTSTKEGHLIICDNA-NGLHKVS-EDG--VENFLSYVN 156 (370)
Q Consensus 85 ~~d~~G~-l~v~~~~g~I~~~~--~g~~~~~~-~~~~~p~~gl~~d~~G~L~v~~~~-~gi~~~~-~~g--~~~~~~~~~ 156 (370)
++.++|+ |.+++.+|.|..|+ +++..... ...+... +++++++|+++++... +.|..++ .++ ...+...
T Consensus 104 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h-- 180 (420)
T 3vl1_A 104 TAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEIT-KLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGH-- 180 (420)
T ss_dssp EECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEE-EEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECC--
T ss_pred EEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccE-EEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCC--
Confidence 4456765 55667889999999 55544432 3445566 8999999975554434 4466666 555 4444211
Q ss_pred CcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecC-------------------
Q 017520 157 GSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG------------------- 217 (370)
Q Consensus 157 g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~------------------- 217 (370)
...+..+++.++|+..++.+ .++.|..||..+++.......
T Consensus 181 ---~~~v~~~~~~~~~~~l~s~~-----------------~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 240 (420)
T 3vl1_A 181 ---RATVTDIAIIDRGRNVLSAS-----------------LDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDR 240 (420)
T ss_dssp ---SSCEEEEEEETTTTEEEEEE-----------------TTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCS
T ss_pred ---CCcEEEEEEcCCCCEEEEEc-----------------CCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcc
Confidence 13578899999998666643 346788888877665443321
Q ss_pred ------CCCccceEEccCCCEEEEEeCCc-EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCC-EEEEE
Q 017520 218 ------FYFANGVALSRDEDYVVVCESWK-CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGT-FWIAI 280 (370)
Q Consensus 218 ------~~~p~gi~~~~dg~~l~v~~~~~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~-lwv~~ 280 (370)
......++++++++.++.+...+ |..||+...+ ....+..........++++++|. +.++.
T Consensus 241 ~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~l~~g 309 (420)
T 3vl1_A 241 QLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKE--QTIQLPSKFTCSCNSLTVDGNNANYIYAG 309 (420)
T ss_dssp SCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCC--EEEEECCTTSSCEEEEEECSSCTTEEEEE
T ss_pred eeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCc--eeEEcccccCCCceeEEEeCCCCCEEEEE
Confidence 12334577889999888887777 9999976532 12222222233455688899987 44443
No 142
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=98.73 E-value=2.1e-05 Score=71.79 Aligned_cols=182 Identities=12% Similarity=0.147 Sum_probs=111.1
Q ss_pred CCCcceEEcCCCc-EEEEecCCeEEEEe--CCeE-EEEEecCCCceeceEEcCCCcEEEEeCC-CceEEEc-CCC--eEE
Q 017520 79 NHPEDASMDKNGV-IYTATRDGWIKRLQ--DGTW-VNWKFIDSQTLVGLTSTKEGHLIICDNA-NGLHKVS-EDG--VEN 150 (370)
Q Consensus 79 ~~P~~i~~d~~G~-l~v~~~~g~I~~~~--~g~~-~~~~~~~~~p~~gl~~d~~G~L~v~~~~-~gi~~~~-~~g--~~~ 150 (370)
....++++.++|. |++++.+|.|..|+ +++. ..+....+... +++++++|+++++... +.|..++ .++ ...
T Consensus 33 ~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 111 (369)
T 3zwl_B 33 RPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIW-SIDVDCFTKYCVTGSADYSIKLWDVSNGQCVAT 111 (369)
T ss_dssp SCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEE-EEEECTTSSEEEEEETTTEEEEEETTTCCEEEE
T ss_pred ceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEE-EEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEE
Confidence 4567889998886 55666899999999 5553 34433455567 9999999976655444 4466666 556 333
Q ss_pred EEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCe------------EEEEecC-
Q 017520 151 FLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNI------------TTLVADG- 217 (370)
Q Consensus 151 ~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~------------~~~~~~~- 217 (370)
+. . ...+..++++++|+..++.... .....+.|..||..++. ...+...
T Consensus 112 ~~---~---~~~v~~~~~~~~~~~l~~~~~~------------~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (369)
T 3zwl_B 112 WK---S---PVPVKRVEFSPCGNYFLAILDN------------VMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHE 173 (369)
T ss_dssp EE---C---SSCEEEEEECTTSSEEEEEECC------------BTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCT
T ss_pred ee---c---CCCeEEEEEccCCCEEEEecCC------------ccCCCCEEEEEEecCCccceeecccccceeeeccCCc
Confidence 32 1 1357789999999866664320 00122566666653221 1111111
Q ss_pred -CCCccceEEccCCCEEEEEeCCc-EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCCEEEEEe
Q 017520 218 -FYFANGVALSRDEDYVVVCESWK-CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAII 281 (370)
Q Consensus 218 -~~~p~gi~~~~dg~~l~v~~~~~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~ 281 (370)
......++++++++.++++...+ |..|++.... .....+ ....+....++++++|++.++..
T Consensus 174 ~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~-~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~ 237 (369)
T 3zwl_B 174 GLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNY-EYVDSI-DLHEKSISDMQFSPDLTYFITSS 237 (369)
T ss_dssp TCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTT-EEEEEE-ECCSSCEEEEEECTTSSEEEEEE
T ss_pred CccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCc-EeEEEE-ecCCCceeEEEECCCCCEEEEec
Confidence 12567789999999888888777 9999976521 112222 22333456688999997655543
No 143
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.73 E-value=9.1e-07 Score=82.34 Aligned_cols=220 Identities=10% Similarity=-0.069 Sum_probs=124.0
Q ss_pred ceEecCCCcCCCcceEEcCCC-cEEEEec----------CCeEEEEe--CCeEEEEEecC--------CCceeceEEcCC
Q 017520 70 FIKVGEGSVNHPEDASMDKNG-VIYTATR----------DGWIKRLQ--DGTWVNWKFID--------SQTLVGLTSTKE 128 (370)
Q Consensus 70 ~~~~~~~~~~~P~~i~~d~~G-~l~v~~~----------~g~I~~~~--~g~~~~~~~~~--------~~p~~gl~~d~~ 128 (370)
..+++.|. .| ++++++|| .+|+++. ++.|..+| +++........ ..|. ++++++|
T Consensus 59 ~~~i~vG~--~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~-~ia~SpD 134 (368)
T 1mda_H 59 LGHSLGAF--LS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVH-IIGNCAS 134 (368)
T ss_dssp EEEEEECT--TC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTT-SEEECTT
T ss_pred EEEEeCCC--CC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcc-eEEEcCC
Confidence 34455563 68 89999987 7999972 56799999 66644333222 4699 9999999
Q ss_pred C-cEEEEeCC-Cc-eEE--Ec-CCCeEEEEeecCCccccccc----ceEEcCCCcEEEEeCCC------CCC--------
Q 017520 129 G-HLIICDNA-NG-LHK--VS-EDGVENFLSYVNGSKLRFAN----DVVEASDGSLYFTVSSS------KYL-------- 184 (370)
Q Consensus 129 G-~L~v~~~~-~g-i~~--~~-~~g~~~~~~~~~g~~~~~~~----~l~~d~~G~l~v~d~~~------~~~-------- 184 (370)
| .|||++.. .. +.. +| .+ +..+. ..+...-.+. -++..++|++.+.+... +..
T Consensus 135 Gk~lyVan~~~~~~v~V~~iD~~t-v~~i~--v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~ 211 (368)
T 1mda_H 135 SACLLFFLFGSSAAAGLSVPGASD-DQLTK--SASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQN 211 (368)
T ss_dssp SSCEEEEECSSSCEEEEEETTTEE-EEEEE--CSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSC
T ss_pred CCEEEEEccCCCCeEEEEEEchhh-ceEEE--CCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeee
Confidence 9 59999864 33 444 56 23 22221 1110000111 13334455433333211 000
Q ss_pred Ccccee------cccccCCCceEEEEeCCCCeEEEEec----------CCCCccc---eEEccCCCEEEEEeC---C---
Q 017520 185 PHEYCL------DILEGKPHGQLLKYDPSSNITTLVAD----------GFYFANG---VALSRDEDYVVVCES---W--- 239 (370)
Q Consensus 185 ~~~~~~------~~~~~~~~g~l~~~d~~t~~~~~~~~----------~~~~p~g---i~~~~dg~~l~v~~~---~--- 239 (370)
...... .+..... +.|+.+|..++..+.... ....|.| +++++|++.+|++.. +
T Consensus 212 vg~~P~~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~ 290 (368)
T 1mda_H 212 CSSQAAQANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCL 290 (368)
T ss_dssp BCSCCEEETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTT
T ss_pred CCCCccccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCccc
Confidence 000000 0000011 567888876543332211 1123455 889999999999754 3
Q ss_pred ---c-EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCC-EEEEEe-cCchhHHHhhhcchhHHHHHHhCCcccccccc
Q 017520 240 ---K-CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGT-FWIAII-KLDARRMKILNSSKLIKHVLAAYPKLFSQFIT 313 (370)
Q Consensus 240 ---~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~-lwv~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (370)
. +.++|....+. ...+ ..+..|.+|++++||+ +|+++. ..
T Consensus 291 ~~~~~~~ViD~~t~~v--v~~i--~vg~~p~gi~~s~Dg~~l~va~~~~~------------------------------ 336 (368)
T 1mda_H 291 AAAENTSSVTASVGQT--SGPI--SNGHDSDAIIAAQDGASDNYANSAGT------------------------------ 336 (368)
T ss_dssp SCEEEEEEEESSSCCE--EECC--EEEEEECEEEECCSSSCEEEEEETTT------------------------------
T ss_pred ccCCCEEEEECCCCeE--EEEE--ECCCCcceEEECCCCCEEEEEccCCC------------------------------
Confidence 3 77999765422 1111 1223599999999996 899987 33
Q ss_pred CCCceEEEEECC-CCcEEEEEeC
Q 017520 314 LGGGAHLIHVAE-DGTIIRNLVD 335 (370)
Q Consensus 314 ~~~~g~v~~~~~-~g~~~~~~~~ 335 (370)
+.|..+|. .++++..+..
T Consensus 337 ----~~VsVID~~t~kvv~~I~v 355 (368)
T 1mda_H 337 ----EVLDIYDAASDQDQSSVEL 355 (368)
T ss_dssp ----TEEEEEESSSCEEEEECCC
T ss_pred ----CeEEEEECCCCcEEEEEEC
Confidence 35888885 5788887754
No 144
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.72 E-value=1.2e-05 Score=74.57 Aligned_cols=87 Identities=8% Similarity=0.142 Sum_probs=55.7
Q ss_pred CcEEEEe------cCCeEEEEe--CCeEEEEEecCCCceeceEEcCCCc-EEEEeC----------CCceEEEc-CCC--
Q 017520 90 GVIYTAT------RDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGH-LIICDN----------ANGLHKVS-EDG-- 147 (370)
Q Consensus 90 G~l~v~~------~~g~I~~~~--~g~~~~~~~~~~~p~~gl~~d~~G~-L~v~~~----------~~gi~~~~-~~g-- 147 (370)
..+|+.+ .++.|+.+| +++..........| ++++++||+ ||+++. .+.|..++ .++
T Consensus 16 ~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~ 93 (361)
T 2oiz_A 16 NRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTF 93 (361)
T ss_dssp GEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCE
T ss_pred CEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcE
Confidence 4688876 256899999 67654433333334 799999995 899863 12377788 455
Q ss_pred eEEEEeecCCc--ccccccceEEcCCC-cEEEEeC
Q 017520 148 VENFLSYVNGS--KLRFANDVVEASDG-SLYFTVS 179 (370)
Q Consensus 148 ~~~~~~~~~g~--~~~~~~~l~~d~~G-~l~v~d~ 179 (370)
...+... .+. ....|..+++++|| .||+++.
T Consensus 94 ~~~i~~~-~~~~~~g~~p~~i~~spdg~~l~v~n~ 127 (361)
T 2oiz_A 94 EKEISLP-PKRVQGLNYDGLFRQTTDGKFIVLQNA 127 (361)
T ss_dssp EEEEEEC-TTBCCBCCCGGGEEECTTSSEEEEEEE
T ss_pred EEEEEcC-ccccccCCCcceEEECCCCCEEEEECC
Confidence 3333211 110 12468899999999 5888864
No 145
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=98.72 E-value=5e-05 Score=68.98 Aligned_cols=177 Identities=12% Similarity=0.075 Sum_probs=111.4
Q ss_pred CCcceEEcCC----C-cEEEEecCCeEEEEe--CCeEEEE---EecCCCceeceEEcCCCcEEEEeCCCc-eEEEc-CCC
Q 017520 80 HPEDASMDKN----G-VIYTATRDGWIKRLQ--DGTWVNW---KFIDSQTLVGLTSTKEGHLIICDNANG-LHKVS-EDG 147 (370)
Q Consensus 80 ~P~~i~~d~~----G-~l~v~~~~g~I~~~~--~g~~~~~---~~~~~~p~~gl~~d~~G~L~v~~~~~g-i~~~~-~~g 147 (370)
.-.++++.++ + .|..|+.++.|..|+ +++.... ........ ++.+.+++.+.++....+ |..++ .++
T Consensus 34 ~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~-~~~~~~~~~~l~s~s~D~~i~lWd~~~~ 112 (321)
T 3ow8_A 34 AIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVV-SVDISHTLPIAASSSLDAHIRLWDLENG 112 (321)
T ss_dssp CEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEE-EEEECSSSSEEEEEETTSEEEEEETTTT
T ss_pred cEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEE-EEEECCCCCEEEEEeCCCcEEEEECCCC
Confidence 4566777643 3 466777899898888 5543322 22233456 888999988776654444 55555 566
Q ss_pred --eEEEEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEe-cCCCCccce
Q 017520 148 --VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-DGFYFANGV 224 (370)
Q Consensus 148 --~~~~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~-~~~~~p~gi 224 (370)
+..+... ...+..+++.|+|+..++.. ..+.+..+|.++++..... ........+
T Consensus 113 ~~~~~~~~~-----~~~~~~~~~spdg~~l~~g~-----------------~dg~v~i~~~~~~~~~~~~~~~~~~v~~~ 170 (321)
T 3ow8_A 113 KQIKSIDAG-----PVDAWTLAFSPDSQYLATGT-----------------HVGKVNIFGVESGKKEYSLDTRGKFILSI 170 (321)
T ss_dssp EEEEEEECC-----TTCCCCEEECTTSSEEEEEC-----------------TTSEEEEEETTTCSEEEEEECSSSCEEEE
T ss_pred CEEEEEeCC-----CccEEEEEECCCCCEEEEEc-----------------CCCcEEEEEcCCCceeEEecCCCceEEEE
Confidence 3333211 12466799999998776643 3578888998766554332 333456789
Q ss_pred EEccCCCEEEEEeCCc-EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCCEEEEEec
Q 017520 225 ALSRDEDYVVVCESWK-CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 282 (370)
Q Consensus 225 ~~~~dg~~l~v~~~~~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~ 282 (370)
++++|++.++.+...+ |..||+...+ ....+ .........++++++|++.++...
T Consensus 171 ~~spdg~~lasg~~dg~i~iwd~~~~~--~~~~~-~~h~~~v~~l~~spd~~~l~s~s~ 226 (321)
T 3ow8_A 171 AYSPDGKYLASGAIDGIINIFDIATGK--LLHTL-EGHAMPIRSLTFSPDSQLLVTASD 226 (321)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTTE--EEEEE-CCCSSCCCEEEECTTSCEEEEECT
T ss_pred EECCCCCEEEEEcCCCeEEEEECCCCc--EEEEE-cccCCceeEEEEcCCCCEEEEEcC
Confidence 9999999888887777 9999976532 12222 223334567889999986665543
No 146
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=98.71 E-value=8.1e-06 Score=75.79 Aligned_cols=182 Identities=9% Similarity=0.008 Sum_probs=112.3
Q ss_pred CCcceEEcCC----C----cEEEEecCCeEEEEe--CCe------EEEEEec-----CCCceeceEEc----CCCcE-EE
Q 017520 80 HPEDASMDKN----G----VIYTATRDGWIKRLQ--DGT------WVNWKFI-----DSQTLVGLTST----KEGHL-II 133 (370)
Q Consensus 80 ~P~~i~~d~~----G----~l~v~~~~g~I~~~~--~g~------~~~~~~~-----~~~p~~gl~~d----~~G~L-~v 133 (370)
...++++.++ | .|++++.+|.|..|+ +++ ...+... ..... ++++. +++.. ++
T Consensus 64 ~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~~~l~ 142 (397)
T 1sq9_A 64 GLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFW-ALKWGASNDRLLSHRLV 142 (397)
T ss_dssp CEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEE-EEEEECCC----CEEEE
T ss_pred cEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEE-EEEEeeccCCCCceEEE
Confidence 4567888877 7 455667889999998 444 4444433 25566 89999 88875 55
Q ss_pred E-eCCCceEEEc-CC------C--eE-----EEEee--cCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccC
Q 017520 134 C-DNANGLHKVS-ED------G--VE-----NFLSY--VNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGK 196 (370)
Q Consensus 134 ~-~~~~gi~~~~-~~------g--~~-----~~~~~--~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~ 196 (370)
+ ...+.|..++ .+ + +. .+... ........+..+++.++| ++++..
T Consensus 143 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~----------------- 204 (397)
T 1sq9_A 143 ATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGF----------------- 204 (397)
T ss_dssp EEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEEC-----------------
T ss_pred EEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEe-----------------
Confidence 4 4444566666 44 3 33 33210 001112457889999999 555533
Q ss_pred CCceEEEEeCCCCeEEEEecC-------CCCccceEEccCCCEEEEEeCC---c-EEEEEeCCCCCCceeeeccC-----
Q 017520 197 PHGQLLKYDPSSNITTLVADG-------FYFANGVALSRDEDYVVVCESW---K-CRKYWLKGERKGKLETFAEN----- 260 (370)
Q Consensus 197 ~~g~l~~~d~~t~~~~~~~~~-------~~~p~gi~~~~dg~~l~v~~~~---~-l~~~~~~~~~~~~~~~~~~~----- 260 (370)
.++.|..||..+++....... ......++++++++.++.+... + |..|++...+ ....+...
T Consensus 205 ~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~--~~~~~~~~~~~~~ 282 (397)
T 1sq9_A 205 NNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGE--RIGSLSVPTHSSQ 282 (397)
T ss_dssp TTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCC--EEEEECBC-----
T ss_pred CCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCc--ccceeccCccccc
Confidence 457899999887765544443 4456789999999988888877 6 9999976532 12222210
Q ss_pred -------CCCCCCceeECCCCCEEEEEec
Q 017520 261 -------LPGAPDNINLAPDGTFWIAIIK 282 (370)
Q Consensus 261 -------~~g~p~~i~~d~~G~lwv~~~~ 282 (370)
..+....++++++|++.++...
T Consensus 283 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 311 (397)
T 1sq9_A 283 ASLGEFAHSSWVMSLSFNDSGETLCSAGW 311 (397)
T ss_dssp ---CCBSBSSCEEEEEECSSSSEEEEEET
T ss_pred ccccccccCCcEEEEEECCCCCEEEEEeC
Confidence 2233456888999986665543
No 147
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=98.70 E-value=2.8e-05 Score=71.14 Aligned_cols=218 Identities=11% Similarity=0.032 Sum_probs=135.6
Q ss_pred CcceEEcCCCcE-EEEecCCeEEEEe--CC--e--E-EEEEecCCCceeceEEcCCCcEEEEeCCCceEEEc-CCC--eE
Q 017520 81 PEDASMDKNGVI-YTATRDGWIKRLQ--DG--T--W-VNWKFIDSQTLVGLTSTKEGHLIICDNANGLHKVS-EDG--VE 149 (370)
Q Consensus 81 P~~i~~d~~G~l-~v~~~~g~I~~~~--~g--~--~-~~~~~~~~~p~~gl~~d~~G~L~v~~~~~gi~~~~-~~g--~~ 149 (370)
..++++.++|.. .++..++.|..|+ .+ . . ..+....+... .+.+.+++.+..+..++.|..++ .++ ..
T Consensus 100 v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~ 178 (340)
T 1got_B 100 VMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLS-CCRFLDDNQIVTSSGDTTCALWDIETGQQTT 178 (340)
T ss_dssp EEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEE-EEEEEETTEEEEEETTSCEEEEETTTTEEEE
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEE-EEEECCCCcEEEEECCCcEEEEECCCCcEEE
Confidence 456778887764 4566888888888 32 1 1 22233344455 78888888877777666677777 566 33
Q ss_pred EEEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEec-CCCCccceEEcc
Q 017520 150 NFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD-GFYFANGVALSR 228 (370)
Q Consensus 150 ~~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~-~~~~p~gi~~~~ 228 (370)
.+ .+. ...+..+++.++|+++++.+ .++.|..||..++....... .....+.++++|
T Consensus 179 ~~----~~h-~~~v~~~~~~~~~~~l~sg~-----------------~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p 236 (340)
T 1got_B 179 TF----TGH-TGDVMSLSLAPDTRLFVSGA-----------------CDASAKLWDVREGMCRQTFTGHESDINAICFFP 236 (340)
T ss_dssp EE----CCC-SSCEEEEEECTTSSEEEEEE-----------------TTSCEEEEETTTCSEEEEECCCSSCEEEEEECT
T ss_pred EE----cCC-CCceEEEEECCCCCEEEEEe-----------------CCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcC
Confidence 32 111 13578899999999877754 35789999987776544333 334567899999
Q ss_pred CCCEEEEEeCCc-EEEEEeCCCCCCceeeecc-CCCCCCCceeECCCCCEEEEEecCchhHHHhhhcchhHHHHHHhCCc
Q 017520 229 DEDYVVVCESWK-CRKYWLKGERKGKLETFAE-NLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPK 306 (370)
Q Consensus 229 dg~~l~v~~~~~-l~~~~~~~~~~~~~~~~~~-~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (370)
+++.++.+...+ |..||+...+ ....+.. ........++++++|++.++....
T Consensus 237 ~~~~l~s~s~d~~v~iwd~~~~~--~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d----------------------- 291 (340)
T 1got_B 237 NGNAFATGSDDATCRLFDLRADQ--ELMTYSHDNIICGITSVSFSKSGRLLLAGYDD----------------------- 291 (340)
T ss_dssp TSSEEEEEETTSCEEEEETTTTE--EEEEECCTTCCSCEEEEEECTTSSEEEEEETT-----------------------
T ss_pred CCCEEEEEcCCCcEEEEECCCCc--EEEEEccCCcccceEEEEECCCCCEEEEECCC-----------------------
Confidence 999877777777 8889876431 1122211 111123457789999877665443
Q ss_pred cccccccCCCceEEEEEC-CCCcEEEEEeCCCCCccccceeEEEE-CC-EEEEEeCCC
Q 017520 307 LFSQFITLGGGAHLIHVA-EDGTIIRNLVDPTGQLMSFVTSGLQV-DN-HLYVISLTS 361 (370)
Q Consensus 307 ~~~~~~~~~~~g~v~~~~-~~g~~~~~~~~~~g~~~~~~t~~~~~-~g-~L~~gs~~~ 361 (370)
+.+..+| ..++.+..+....+ .++.+... +| .|.-|+..+
T Consensus 292 -----------~~i~vwd~~~~~~~~~~~~h~~----~v~~~~~s~dg~~l~s~s~D~ 334 (340)
T 1got_B 292 -----------FNCNVWDALKADRAGVLAGHDN----RVSCLGVTDDGMAVATGSWDS 334 (340)
T ss_dssp -----------SEEEEEETTTCCEEEEEECCSS----CEEEEEECTTSSCEEEEETTS
T ss_pred -----------CeEEEEEcccCcEeeEeecCCC----cEEEEEEcCCCCEEEEEcCCc
Confidence 3567777 45777777765443 35555554 34 355555443
No 148
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.69 E-value=3.5e-06 Score=74.25 Aligned_cols=176 Identities=13% Similarity=0.040 Sum_probs=109.3
Q ss_pred CCcceEEcCCCcEEEEecCCeEEEEe--C-CeEEEEEecC--CCceeceEEcCCCcEEEEeC-----CCceEEEc-CCC-
Q 017520 80 HPEDASMDKNGVIYTATRDGWIKRLQ--D-GTWVNWKFID--SQTLVGLTSTKEGHLIICDN-----ANGLHKVS-EDG- 147 (370)
Q Consensus 80 ~P~~i~~d~~G~l~v~~~~g~I~~~~--~-g~~~~~~~~~--~~p~~gl~~d~~G~L~v~~~-----~~gi~~~~-~~g- 147 (370)
...+++++++|..++...++.|+.++ + ++........ ..+. +++++++|+.++... ...|+.++ .++
T Consensus 43 ~v~~~~~spdg~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~-~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~ 121 (297)
T 2ojh_A 43 LFEAPNWSPDGKYLLLNSEGLLYRLSLAGDPSPEKVDTGFATICNN-DHGISPDGALYAISDKVEFGKSAIYLLPSTGGT 121 (297)
T ss_dssp CCEEEEECTTSSEEEEEETTEEEEEESSSCCSCEECCCTTCCCBCS-CCEECTTSSEEEEEECTTTSSCEEEEEETTCCC
T ss_pred ceEeeEECCCCCEEEEEcCCeEEEEeCCCCCCceEecccccccccc-ceEECCCCCEEEEEEeCCCCcceEEEEECCCCc
Confidence 57789999999866656688999999 5 6555443322 3456 899999997544432 23577777 444
Q ss_pred eEEEEeecCCcccccccceEEcCCCc-EEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecCCCCccceEE
Q 017520 148 VENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVAL 226 (370)
Q Consensus 148 ~~~~~~~~~g~~~~~~~~l~~d~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~p~gi~~ 226 (370)
.+.+... ..++.++++++|+ ++++... ...-.|+.++.+++....+.........+++
T Consensus 122 ~~~~~~~------~~~~~~~~spdg~~l~~~~~~---------------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (297)
T 2ojh_A 122 PRLMTKN------LPSYWHGWSPDGKSFTYCGIR---------------DQVFDIYSMDIDSGVETRLTHGEGRNDGPDY 180 (297)
T ss_dssp CEECCSS------SSEEEEEECTTSSEEEEEEEE---------------TTEEEEEEEETTTCCEEECCCSSSCEEEEEE
T ss_pred eEEeecC------CCccceEECCCCCEEEEEECC---------------CCceEEEEEECCCCcceEcccCCCccccceE
Confidence 4433211 1356789999996 5545321 0223688888877777665555556678999
Q ss_pred ccCCCEEEEEeC-Cc---EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCCE-EEEEe
Q 017520 227 SRDEDYVVVCES-WK---CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTF-WIAII 281 (370)
Q Consensus 227 ~~dg~~l~v~~~-~~---l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~l-wv~~~ 281 (370)
++||+.++++.. .+ |+.++.++. ....+. ........++++++|+. +++..
T Consensus 181 s~dg~~l~~~~~~~~~~~i~~~~~~~~---~~~~~~-~~~~~~~~~~~s~dg~~l~~~~~ 236 (297)
T 2ojh_A 181 SPDGRWIYFNSSRTGQMQIWRVRVDGS---SVERIT-DSAYGDWFPHPSPSGDKVVFVSY 236 (297)
T ss_dssp CTTSSEEEEEECTTSSCEEEEEETTSS---CEEECC-CCSEEEEEEEECTTSSEEEEEEE
T ss_pred CCCCCEEEEEecCCCCccEEEECCCCC---CcEEEe-cCCcccCCeEECCCCCEEEEEEc
Confidence 999998887764 33 666664442 222222 11222345778999974 44433
No 149
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.68 E-value=8.1e-06 Score=82.33 Aligned_cols=196 Identities=14% Similarity=0.079 Sum_probs=113.2
Q ss_pred CCCcceEEcCCCcEEEEecCCeEEEEe--CCeEEEEEecCCCceeceEEcCCCcEEEEeCCCceEEEc-CC-----C-eE
Q 017520 79 NHPEDASMDKNGVIYTATRDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGHLIICDNANGLHKVS-ED-----G-VE 149 (370)
Q Consensus 79 ~~P~~i~~d~~G~l~v~~~~g~I~~~~--~g~~~~~~~~~~~p~~gl~~d~~G~L~v~~~~~gi~~~~-~~-----g-~~ 149 (370)
..+.++++++|+.+.++ .++.|+.++ +++..........+. .+++++||+..+......|+.++ .+ | ..
T Consensus 82 ~~v~~~~~spd~~~~~~-~~~~i~~~d~~~~~~~~l~~~~~~~~-~~~~SpdG~~la~~~~~~i~v~~~~~~~~~~g~~~ 159 (706)
T 2z3z_A 82 FPSFRTLDAGRGLVVLF-TQGGLVGFDMLARKVTYLFDTNEETA-SLDFSPVGDRVAYVRNHNLYIARGGKLGEGMSRAI 159 (706)
T ss_dssp CCCEEEEETTTTEEEEE-ETTEEEEEETTTTEEEEEECCTTCCT-TCEECTTSSEEEEEETTEEEEEECBCTTSCCCCCE
T ss_pred cCceeEEECCCCeEEEE-ECCEEEEEECCCCceEEccCCccccc-CCcCCCCCCEEEEEECCeEEEEecCcccccCCCcE
Confidence 35788999988666655 468999999 666666555555567 89999999754444456788888 56 6 43
Q ss_pred EEEeecCC----------cccccccceEEcCCCc-EEEEeCCCCCCCcccee-----------c-----ccccCCCceEE
Q 017520 150 NFLSYVNG----------SKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCL-----------D-----ILEGKPHGQLL 202 (370)
Q Consensus 150 ~~~~~~~g----------~~~~~~~~l~~d~~G~-l~v~d~~~~~~~~~~~~-----------~-----~~~~~~~g~l~ 202 (370)
.+...... ..+..+..++++|||+ |+++..... ....+.. . .-.......|+
T Consensus 160 ~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~-~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~ 238 (706)
T 2z3z_A 160 AVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQS-MVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVG 238 (706)
T ss_dssp ESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECT-TSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEE
T ss_pred EeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCC-CCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEE
Confidence 32211111 0112357899999996 554431000 0000000 0 00011346799
Q ss_pred EEeCCCCeEEEEecC---CCCccceEEccCCCEEEEEeCC------cEEEEEeCCCCCCceeeec-cCCCC---CCCcee
Q 017520 203 KYDPSSNITTLVADG---FYFANGVALSRDEDYVVVCESW------KCRKYWLKGERKGKLETFA-ENLPG---APDNIN 269 (370)
Q Consensus 203 ~~d~~t~~~~~~~~~---~~~p~gi~~~~dg~~l~v~~~~------~l~~~~~~~~~~~~~~~~~-~~~~g---~p~~i~ 269 (370)
.+|.++++...+... ...+..+++++||+.++++... .|+.+|+.+.+ ....+. ..... ....++
T Consensus 239 ~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~--~~~~~~~~~~~~~~~~~~~~~ 316 (706)
T 2z3z_A 239 IYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGR--FVRTLFVETDKHYVEPLHPLT 316 (706)
T ss_dssp EEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCC--EEEEEEEEECSSCCCCCSCCE
T ss_pred EEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCc--eeeEEEEccCCCeECccCCce
Confidence 999998876655422 1234678999999988886543 18888876531 122221 11111 235678
Q ss_pred ECC--CCCEEEE
Q 017520 270 LAP--DGTFWIA 279 (370)
Q Consensus 270 ~d~--~G~lwv~ 279 (370)
+++ ||++.+.
T Consensus 317 ~sp~~dg~~l~~ 328 (706)
T 2z3z_A 317 FLPGSNNQFIWQ 328 (706)
T ss_dssp ECTTCSSEEEEE
T ss_pred eecCCCCEEEEE
Confidence 888 8874443
No 150
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.67 E-value=1.7e-05 Score=73.90 Aligned_cols=228 Identities=13% Similarity=0.091 Sum_probs=136.4
Q ss_pred CCcceEEcCCCc-EEEEecCCeEEEEe-CCeE-EEEEecCCCceeceEEcCCCcE-EEEeCCCceEEEc-CCC--eEEEE
Q 017520 80 HPEDASMDKNGV-IYTATRDGWIKRLQ-DGTW-VNWKFIDSQTLVGLTSTKEGHL-IICDNANGLHKVS-EDG--VENFL 152 (370)
Q Consensus 80 ~P~~i~~d~~G~-l~v~~~~g~I~~~~-~g~~-~~~~~~~~~p~~gl~~d~~G~L-~v~~~~~gi~~~~-~~g--~~~~~ 152 (370)
...++++.++|. |++++.+|.|..|+ +++. ..+........ ++++.++|+. +.+...+.+..++ .++ ...+.
T Consensus 110 ~v~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 188 (425)
T 1r5m_A 110 QVTCLAWSHDGNSIVTGVENGELRLWNKTGALLNVLNFHRAPIV-SVKWNKDGTHIISMDVENVTILWNVISGTVMQHFE 188 (425)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCCSCEE-EEEECTTSSEEEEEETTCCEEEEETTTTEEEEEEC
T ss_pred ceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeeccCCCccEE-EEEECCCCCEEEEEecCCeEEEEECCCCcEEEEee
Confidence 456788888885 55667889999999 6654 34433445566 9999999974 4455445577777 566 33221
Q ss_pred eecCCc----------ccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEe-cCCCCc
Q 017520 153 SYVNGS----------KLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-DGFYFA 221 (370)
Q Consensus 153 ~~~~g~----------~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~-~~~~~p 221 (370)
...... ....+..+++.+++.++++. .++.|..||..+++..... ......
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~g~i~~~d~~~~~~~~~~~~~~~~i 250 (425)
T 1r5m_A 189 LKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPG------------------PKGAIFVYQITEKTPTGKLIGHHGPI 250 (425)
T ss_dssp CC---------------CCCBSCCEEEETTEEEEEC------------------GGGCEEEEETTCSSCSEEECCCSSCE
T ss_pred ccccCccceeeccccCCcceeeEEEEcCCCEEEEEc------------------CCCeEEEEEcCCCceeeeeccCCCce
Confidence 110000 00116778888888766664 3478999998766543332 223345
Q ss_pred cceEEccCCCEEEEEeCCc-EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCCEEEEEecCchhHHHhhhcchhHHHH
Q 017520 222 NGVALSRDEDYVVVCESWK-CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHV 300 (370)
Q Consensus 222 ~gi~~~~dg~~l~v~~~~~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~ 300 (370)
..++++++++.++.+...+ |..|++...+. ...+ .........+++.++|.++.+...
T Consensus 251 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~--~~~~-~~~~~~i~~~~~~~~~~l~~~~~d------------------ 309 (425)
T 1r5m_A 251 SVLEFNDTNKLLLSASDDGTLRIWHGGNGNS--QNCF-YGHSQSIVSASWVGDDKVISCSMD------------------ 309 (425)
T ss_dssp EEEEEETTTTEEEEEETTSCEEEECSSSBSC--SEEE-CCCSSCEEEEEEETTTEEEEEETT------------------
T ss_pred EEEEECCCCCEEEEEcCCCEEEEEECCCCcc--ceEe-cCCCccEEEEEECCCCEEEEEeCC------------------
Confidence 7799999999888887777 88888765321 2222 123334566888888833333333
Q ss_pred HHhCCccccccccCCCceEEEEECC-CCcEEEEEeCCCCCccccceeEEEE-CC-EEEEEeCCCCeEEEEeC
Q 017520 301 LAAYPKLFSQFITLGGGAHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQV-DN-HLYVISLTSNFIGKVQL 369 (370)
Q Consensus 301 ~~~~~~~~~~~~~~~~~g~v~~~~~-~g~~~~~~~~~~g~~~~~~t~~~~~-~g-~L~~gs~~~~~i~~~~~ 369 (370)
+.+..+|. .++.+..+....+ .++.+... ++ .|+.++. ...|.++++
T Consensus 310 -----------------~~i~i~d~~~~~~~~~~~~~~~----~i~~~~~s~~~~~l~~~~~-dg~i~i~~~ 359 (425)
T 1r5m_A 310 -----------------GSVRLWSLKQNTLLALSIVDGV----PIFAGRISQDGQKYAVAFM-DGQVNVYDL 359 (425)
T ss_dssp -----------------SEEEEEETTTTEEEEEEECTTC----CEEEEEECTTSSEEEEEET-TSCEEEEEC
T ss_pred -----------------CcEEEEECCCCcEeEecccCCc----cEEEEEEcCCCCEEEEEEC-CCeEEEEEC
Confidence 35677774 5777777765433 34455443 33 4555544 345555543
No 151
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=98.67 E-value=1e-05 Score=74.59 Aligned_cols=169 Identities=11% Similarity=0.097 Sum_probs=105.6
Q ss_pred CcceEEcCCCcEEEEecCCeEEEEe--CCeE-EE--E--EecCCCceeceEEcCCCcEEEEeCCCc-eEEEc-CCC--eE
Q 017520 81 PEDASMDKNGVIYTATRDGWIKRLQ--DGTW-VN--W--KFIDSQTLVGLTSTKEGHLIICDNANG-LHKVS-EDG--VE 149 (370)
Q Consensus 81 P~~i~~d~~G~l~v~~~~g~I~~~~--~g~~-~~--~--~~~~~~p~~gl~~d~~G~L~v~~~~~g-i~~~~-~~g--~~ 149 (370)
-.++++.+++.+.+++.+|.|..|+ +++. .. . ....+... ++++.++|+++++....+ |..++ .++ +.
T Consensus 85 v~~~~~s~d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~-~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~ 163 (344)
T 4gqb_B 85 VADLTWVGERGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVS-TVSVLSSGTQAVSGSKDICIKVWDLAQQVVLS 163 (344)
T ss_dssp EEEEEEETTTEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEE-EEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred EEEEEEeCCCeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEE-EEEECCCCCEEEEEeCCCeEEEEECCCCcEEE
Confidence 4568888899999999999999998 4532 11 1 12344567 999999998766544444 55566 566 33
Q ss_pred EEEeecCCcccccccceEEcCCC-cEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEec---CCCCccceE
Q 017520 150 NFLSYVNGSKLRFANDVVEASDG-SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD---GFYFANGVA 225 (370)
Q Consensus 150 ~~~~~~~g~~~~~~~~l~~d~~G-~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~---~~~~p~gi~ 225 (370)
.+ .+. ...++.+++.+++ +++++.+ .++.|..+|..+++...... .......++
T Consensus 164 ~~----~~h-~~~V~~~~~~~~~~~~l~s~s-----------------~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 221 (344)
T 4gqb_B 164 SY----RAH-AAQVTCVAASPHKDSVFLSCS-----------------EDNRILLWDTRCPKPASQIGCSAPGYLPTSLA 221 (344)
T ss_dssp EE----CCC-SSCEEEEEECSSCTTEEEEEE-----------------TTSCEEEEETTSSSCEEECC----CCCEEEEE
T ss_pred EE----cCc-CCceEEEEecCCCCCceeeec-----------------cccccccccccccceeeeeecceeeccceeee
Confidence 33 221 1367889999988 5766643 35788999987765443221 122456788
Q ss_pred EccCCCEEEE-EeCCc-EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCC
Q 017520 226 LSRDEDYVVV-CESWK-CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGT 275 (370)
Q Consensus 226 ~~~dg~~l~v-~~~~~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~ 275 (370)
+++++..+++ +...+ |..||+...+. ...+. ........+++.++|.
T Consensus 222 ~~p~~~~~l~sg~~dg~v~~wd~~~~~~--~~~~~-~h~~~v~~v~fsp~g~ 270 (344)
T 4gqb_B 222 WHPQQSEVFVFGDENGTVSLVDTKSTSC--VLSSA-VHSQCVTGLVFSPHSV 270 (344)
T ss_dssp ECSSCTTEEEEEETTSEEEEEESCC--C--CEEEE-CCSSCEEEEEECSSSS
T ss_pred ecCCCCcceEEeccCCcEEEEECCCCcE--EEEEc-CCCCCEEEEEEccCCC
Confidence 9986543554 45555 88898765421 22222 2223345688888884
No 152
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=98.67 E-value=4.2e-05 Score=71.50 Aligned_cols=144 Identities=15% Similarity=0.139 Sum_probs=93.5
Q ss_pred cceEEcCCCc-EEEEecCCeEEEEe--CCeEE-EEEecCCCceeceEEcCCCcEEEEeCCCc-eEEEc-CCC-eEEEEee
Q 017520 82 EDASMDKNGV-IYTATRDGWIKRLQ--DGTWV-NWKFIDSQTLVGLTSTKEGHLIICDNANG-LHKVS-EDG-VENFLSY 154 (370)
Q Consensus 82 ~~i~~d~~G~-l~v~~~~g~I~~~~--~g~~~-~~~~~~~~p~~gl~~d~~G~L~v~~~~~g-i~~~~-~~g-~~~~~~~ 154 (370)
.++++.++|. |.+++.+|.|..|+ +++.. .+........ ++++.++|+.+++....+ +..++ .++ .......
T Consensus 127 ~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~-~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~ 205 (393)
T 1erj_A 127 RSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIY-SLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSI 205 (393)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEE-EEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred EEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEE-EEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEc
Confidence 4788888886 44566899999999 55543 3333445567 899999997666544444 55556 566 2222111
Q ss_pred cCCcccccccceEEcC-CCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEec--------CCCCccceE
Q 017520 155 VNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD--------GFYFANGVA 225 (370)
Q Consensus 155 ~~g~~~~~~~~l~~d~-~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~--------~~~~p~gi~ 225 (370)
. ..+..+++.+ +|++.++.+ .++.|..||..++....... .......++
T Consensus 206 -~----~~v~~~~~~~~~~~~l~~~s-----------------~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~ 263 (393)
T 1erj_A 206 -E----DGVTTVAVSPGDGKYIAAGS-----------------LDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVV 263 (393)
T ss_dssp -S----SCEEEEEECSTTCCEEEEEE-----------------TTSCEEEEETTTCCEEEEEC------CCCSSCEEEEE
T ss_pred -C----CCcEEEEEECCCCCEEEEEc-----------------CCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEE
Confidence 1 2466788888 787766643 35778889987765433221 122356789
Q ss_pred EccCCCEEEEEeCCc-EEEEEeCC
Q 017520 226 LSRDEDYVVVCESWK-CRKYWLKG 248 (370)
Q Consensus 226 ~~~dg~~l~v~~~~~-l~~~~~~~ 248 (370)
++++++.++.+...+ |..|++..
T Consensus 264 ~~~~g~~l~s~s~d~~v~~wd~~~ 287 (393)
T 1erj_A 264 FTRDGQSVVSGSLDRSVKLWNLQN 287 (393)
T ss_dssp ECTTSSEEEEEETTSEEEEEEC--
T ss_pred ECCCCCEEEEEeCCCEEEEEECCC
Confidence 999999887777777 88888754
No 153
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.67 E-value=7.6e-06 Score=77.48 Aligned_cols=128 Identities=11% Similarity=0.023 Sum_probs=82.7
Q ss_pred CcEEEEecC-----CeEEEEe--CCeEEEEEecCCCceeceEEcCCCc-EEEEeC----------CCceEEEc-CCC--e
Q 017520 90 GVIYTATRD-----GWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGH-LIICDN----------ANGLHKVS-EDG--V 148 (370)
Q Consensus 90 G~l~v~~~~-----g~I~~~~--~g~~~~~~~~~~~p~~gl~~d~~G~-L~v~~~----------~~gi~~~~-~~g--~ 148 (370)
..+|+.+.. +.|..+| ++++..-...+..| ++++++||+ |||++. .+.|..+| .++ .
T Consensus 85 ~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv 162 (426)
T 3c75_H 85 RRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPI 162 (426)
T ss_dssp TEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEE
T ss_pred CEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEE
Confidence 369999843 6899999 67665545555556 899999995 999974 23488888 555 3
Q ss_pred EEEEeecC-Ccc---cccccceEEcCCC-cEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecC----CC
Q 017520 149 ENFLSYVN-GSK---LRFANDVVEASDG-SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG----FY 219 (370)
Q Consensus 149 ~~~~~~~~-g~~---~~~~~~l~~d~~G-~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~----~~ 219 (370)
..+. . . ..+ ...|..+++++|| ++|+++.. ..+.|.++|.+++++.....- ..
T Consensus 163 ~~I~-v-~g~~r~~~g~~P~~~~~spDGk~lyV~n~~----------------~~~~VsVID~~t~kvv~~I~v~g~~~~ 224 (426)
T 3c75_H 163 ADIE-L-PDAPRFLVGTYQWMNALTPDNKNLLFYQFS----------------PAPAVGVVDLEGKTFDRMLDVPDCYHI 224 (426)
T ss_dssp EEEE-E-TTCCCCCBSCCGGGSEECTTSSEEEEEECS----------------SSCEEEEEETTTTEEEEEEECCSEEEE
T ss_pred EEEE-C-CCccccccCCCcceEEEcCCCCEEEEEecC----------------CCCeEEEEECCCCeEEEEEEcCCceee
Confidence 3332 1 1 111 2468899999999 59998642 347899999998876432221 11
Q ss_pred Cccc----eEEccCCCEEEEEe
Q 017520 220 FANG----VALSRDEDYVVVCE 237 (370)
Q Consensus 220 ~p~g----i~~~~dg~~l~v~~ 237 (370)
.|.| +++++||+.+|+..
T Consensus 225 ~p~g~~~~v~~~~dG~~~~V~~ 246 (426)
T 3c75_H 225 FPASPTVFYMNCRDGSLARVDF 246 (426)
T ss_dssp EEEETTEEEEEETTSSEEEEEC
T ss_pred ccCCCcEEEEEcCCCCEEEEEC
Confidence 1223 45556666555554
No 154
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=98.66 E-value=1.6e-06 Score=80.26 Aligned_cols=179 Identities=11% Similarity=0.058 Sum_probs=102.6
Q ss_pred CCcceEEcCCCcEEEEe-c------CCeEEEEe--CCeE-----EEEEecCCCceeceEEcCCCcEEEEeCCCceEEEc-
Q 017520 80 HPEDASMDKNGVIYTAT-R------DGWIKRLQ--DGTW-----VNWKFIDSQTLVGLTSTKEGHLIICDNANGLHKVS- 144 (370)
Q Consensus 80 ~P~~i~~d~~G~l~v~~-~------~g~I~~~~--~g~~-----~~~~~~~~~p~~gl~~d~~G~L~v~~~~~gi~~~~- 144 (370)
...++++.+||.+.++. . +|.|+.++ ++.. ........... ++++.+++.++++...+.|..++
T Consensus 44 ~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~-~~~~s~d~~~l~~s~dg~v~lWd~ 122 (357)
T 4g56_B 44 QIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVT-DVAWVSEKGILVASDSGAVELWEI 122 (357)
T ss_dssp EEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEE-EEEEETTTEEEEEETTSCEEEC--
T ss_pred CEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEE-EEEEcCCCCEEEEECCCEEEEeec
Confidence 35678999999877654 2 67788777 3321 11222333456 89999999988887654455555
Q ss_pred CCC--eEEEEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecC-CCCc
Q 017520 145 EDG--VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG-FYFA 221 (370)
Q Consensus 145 ~~g--~~~~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~-~~~p 221 (370)
.++ .........+ ....+..+++.++|+..++.+ .++.|..+|..+++....... ....
T Consensus 123 ~~~~~~~~~~~~~~~-h~~~V~~v~~spdg~~l~sgs-----------------~dg~v~iwd~~~~~~~~~~~~h~~~v 184 (357)
T 4g56_B 123 LEKESLLVNKFAKYE-HDDIVKTLSVFSDGTQAVSGG-----------------KDFSVKVWDLSQKAVLKSYNAHSSEV 184 (357)
T ss_dssp ------CCCCEEECC-CSSCEEEEEECSSSSEEEEEE-----------------TTSCEEEEETTTTEEEEEECCCSSCE
T ss_pred cccceeEEEeeccCC-CCCCEEEEEECCCCCEEEEEe-----------------CCCeEEEEECCCCcEEEEEcCCCCCE
Confidence 444 1111000111 123578899999998777643 357899999988876544433 3456
Q ss_pred cceEEccCCCEEE-EEeCCc-EEEEEeCCCCCCceeeeccCCCCCCCceeECCCC-CEEE
Q 017520 222 NGVALSRDEDYVV-VCESWK-CRKYWLKGERKGKLETFAENLPGAPDNINLAPDG-TFWI 278 (370)
Q Consensus 222 ~gi~~~~dg~~l~-v~~~~~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G-~lwv 278 (370)
+.++++++++.++ .+...+ |..||+...+......+ ......+..+++.+++ ++.+
T Consensus 185 ~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~-~~~~~~v~~v~~sp~~~~~la 243 (357)
T 4g56_B 185 NCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDF-CASDTIPTSVTWHPEKDDTFA 243 (357)
T ss_dssp EEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCC-TTCCSCEEEEEECTTSTTEEE
T ss_pred EEEEEccCCCceeeeeccCCceEEEECCCCceeeeeee-ccccccccchhhhhcccceEE
Confidence 7889999876444 444555 88888765422111111 1122234456777664 4443
No 155
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.65 E-value=5.2e-06 Score=77.42 Aligned_cols=175 Identities=11% Similarity=0.073 Sum_probs=111.3
Q ss_pred CCcceEEcCCCc-EEEEecCCeEEEEe--CCeEEE-EEecCCC---------------ceeceEEcCCCcEEEEeCCCce
Q 017520 80 HPEDASMDKNGV-IYTATRDGWIKRLQ--DGTWVN-WKFIDSQ---------------TLVGLTSTKEGHLIICDNANGL 140 (370)
Q Consensus 80 ~P~~i~~d~~G~-l~v~~~~g~I~~~~--~g~~~~-~~~~~~~---------------p~~gl~~d~~G~L~v~~~~~gi 140 (370)
...++++.++|. |++++.+|.|..|+ +++... +...... .. .+.+.+++.++++...+.|
T Consensus 151 ~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~i 229 (425)
T 1r5m_A 151 PIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGV-DVEWVDDDKFVIPGPKGAI 229 (425)
T ss_dssp CEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC---------------CCCBS-CCEEEETTEEEEECGGGCE
T ss_pred cEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceee-EEEEcCCCEEEEEcCCCeE
Confidence 456788888875 66777889999999 555333 2222222 56 8888888888877766667
Q ss_pred EEEc-CCC--eEEEEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEec-
Q 017520 141 HKVS-EDG--VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD- 216 (370)
Q Consensus 141 ~~~~-~~g--~~~~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~- 216 (370)
..++ .++ ...+... ...+..++++++|+.+++.. .++.|..||..+++......
T Consensus 230 ~~~d~~~~~~~~~~~~~-----~~~i~~~~~~~~~~~l~~~~-----------------~d~~i~i~d~~~~~~~~~~~~ 287 (425)
T 1r5m_A 230 FVYQITEKTPTGKLIGH-----HGPISVLEFNDTNKLLLSAS-----------------DDGTLRIWHGGNGNSQNCFYG 287 (425)
T ss_dssp EEEETTCSSCSEEECCC-----SSCEEEEEEETTTTEEEEEE-----------------TTSCEEEECSSSBSCSEEECC
T ss_pred EEEEcCCCceeeeeccC-----CCceEEEEECCCCCEEEEEc-----------------CCCEEEEEECCCCccceEecC
Confidence 7777 555 3333211 13567899999997666543 34678889877654433322
Q ss_pred CCCCccceEEccCCCEEEEEeCCc-EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCCEEEEEe
Q 017520 217 GFYFANGVALSRDEDYVVVCESWK-CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAII 281 (370)
Q Consensus 217 ~~~~p~gi~~~~dg~~l~v~~~~~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~ 281 (370)
.......+++++++ .++.+...+ |..|++...+ ....+. ........++++++|++.++..
T Consensus 288 ~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~--~~~~~~-~~~~~i~~~~~s~~~~~l~~~~ 349 (425)
T 1r5m_A 288 HSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNT--LLALSI-VDGVPIFAGRISQDGQKYAVAF 349 (425)
T ss_dssp CSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTE--EEEEEE-CTTCCEEEEEECTTSSEEEEEE
T ss_pred CCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCc--EeEecc-cCCccEEEEEEcCCCCEEEEEE
Confidence 33455788999999 677777766 9999876432 122221 2233456688899997555543
No 156
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.65 E-value=1.8e-06 Score=84.20 Aligned_cols=190 Identities=11% Similarity=0.024 Sum_probs=113.4
Q ss_pred CC-cEEEEe-cCCeEEEEe--CCeEEEEEe--cCCCceeceEE-c-CCC-cEEEEeC-----------------CC-ceE
Q 017520 89 NG-VIYTAT-RDGWIKRLQ--DGTWVNWKF--IDSQTLVGLTS-T-KEG-HLIICDN-----------------AN-GLH 141 (370)
Q Consensus 89 ~G-~l~v~~-~~g~I~~~~--~g~~~~~~~--~~~~p~~gl~~-d-~~G-~L~v~~~-----------------~~-gi~ 141 (370)
|| .+|+.+ .+++|.+++ +.+...+.. ....|+ |+++ + +++ .+|+++. .. -+.
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~ph-g~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIH-GLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEE-EEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCc-ceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 44 699988 677899999 556444323 245689 9998 4 667 4787741 11 244
Q ss_pred EEc-CCCeEEEEeecCCcccccccceEEcCCC-cEEEEeCCCCCC---------Cccce--------eccc-cc--CCCc
Q 017520 142 KVS-EDGVENFLSYVNGSKLRFANDVVEASDG-SLYFTVSSSKYL---------PHEYC--------LDIL-EG--KPHG 199 (370)
Q Consensus 142 ~~~-~~g~~~~~~~~~g~~~~~~~~l~~d~~G-~l~v~d~~~~~~---------~~~~~--------~~~~-~~--~~~g 199 (370)
.+| ++. +......-+ ..+..+++++|| .+|+++..++-+ ..++. .... .+ ..-+
T Consensus 179 vID~~t~-~v~~qI~Vg---g~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~ 254 (595)
T 1fwx_A 179 AVDADKW-EVAWQVLVS---GNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELN 254 (595)
T ss_dssp EEETTTT-EEEEEEEES---SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEET
T ss_pred EEECCCC-eEEEEEEeC---CCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEEC
Confidence 455 333 111111111 257889999998 488886543221 00110 0000 00 0014
Q ss_pred eEEEEeCCC--CeE-EEEecCCCCccceEEccCCCEEEEEeCCc--EEEEEeCCCC------CCcee-eecc-CCCCCCC
Q 017520 200 QLLKYDPSS--NIT-TLVADGFYFANGVALSRDEDYVVVCESWK--CRKYWLKGER------KGKLE-TFAE-NLPGAPD 266 (370)
Q Consensus 200 ~l~~~d~~t--~~~-~~~~~~~~~p~gi~~~~dg~~l~v~~~~~--l~~~~~~~~~------~~~~~-~~~~-~~~g~p~ 266 (370)
.|-.+|..+ ++. .........|.|+.++|||+++|+++... |.+||.+..+ +.... .... .....|.
T Consensus 255 ~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~ 334 (595)
T 1fwx_A 255 GVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPL 334 (595)
T ss_dssp TEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEE
T ss_pred cEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcc
Confidence 588999986 333 22333346899999999999999999776 9999976321 11111 1111 2233699
Q ss_pred ceeECCCCCEEEEEecC
Q 017520 267 NINLAPDGTFWIAIIKL 283 (370)
Q Consensus 267 ~i~~d~~G~lwv~~~~~ 283 (370)
.+++|++|++|++..-.
T Consensus 335 h~aF~~dG~aY~t~~ld 351 (595)
T 1fwx_A 335 HTAFDGRGNAYTSLFLD 351 (595)
T ss_dssp EEEECTTSEEEEEETTT
T ss_pred eEEECCCCeEEEEEecC
Confidence 99999999999987543
No 157
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=98.64 E-value=1.4e-05 Score=73.57 Aligned_cols=178 Identities=10% Similarity=0.028 Sum_probs=103.2
Q ss_pred CcceEEcCCCcEEEEecCC-------eEEEEe---CC----eEEEEEecCCCceeceEEcCCCcEEEEeCCCceEEEc-C
Q 017520 81 PEDASMDKNGVIYTATRDG-------WIKRLQ---DG----TWVNWKFIDSQTLVGLTSTKEGHLIICDNANGLHKVS-E 145 (370)
Q Consensus 81 P~~i~~d~~G~l~v~~~~g-------~I~~~~---~g----~~~~~~~~~~~p~~gl~~d~~G~L~v~~~~~gi~~~~-~ 145 (370)
-+++++.+||.+.++..++ .+..++ .+ ............. ++++.+++.|..+..++.|..++ .
T Consensus 33 v~~~~fs~dG~~l~~~sd~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~s~d~~l~~~s~dg~v~lWd~~ 111 (344)
T 4gqb_B 33 LEAARYRSDGALLLGASSLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVA-DLTWVGERGILVASDSGAVELWELD 111 (344)
T ss_dssp EEEEEECTTSCEEEEEECCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEE-EEEEETTTEEEEEETTSEEEEEEEC
T ss_pred EEEEEECCCCCEEEEEeCCceEEeeceeeeeccccccCCcceeeeeeccCCCEE-EEEEeCCCeEEEEECCCEEEEEecc
Confidence 4678899999988776443 333333 11 1111111223355 89999998888877655455556 5
Q ss_pred CC--eEEEEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecC-CCCcc
Q 017520 146 DG--VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG-FYFAN 222 (370)
Q Consensus 146 ~g--~~~~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~-~~~p~ 222 (370)
++ .........+. ...++.+++.++|+..++.+ .++.|..+|..+++......+ .....
T Consensus 112 ~~~~~~~~~~~~~~H-~~~V~~v~~spdg~~l~sgs-----------------~d~~i~iwd~~~~~~~~~~~~h~~~V~ 173 (344)
T 4gqb_B 112 ENETLIVSKFCKYEH-DDIVSTVSVLSSGTQAVSGS-----------------KDICIKVWDLAQQVVLSSYRAHAAQVT 173 (344)
T ss_dssp TTSSCEEEEEEEECC-SSCEEEEEECTTSSEEEEEE-----------------TTSCEEEEETTTTEEEEEECCCSSCEE
T ss_pred CCCceeEeeccccCC-CCCEEEEEECCCCCEEEEEe-----------------CCCeEEEEECCCCcEEEEEcCcCCceE
Confidence 55 33322111121 13678899999998777643 357899999988876544443 34457
Q ss_pred ceEEccCCCEEEEE-eCCc-EEEEEeCCCCCCceeeeccCC-CCCCCceeECCC-CCEEEE
Q 017520 223 GVALSRDEDYVVVC-ESWK-CRKYWLKGERKGKLETFAENL-PGAPDNINLAPD-GTFWIA 279 (370)
Q Consensus 223 gi~~~~dg~~l~v~-~~~~-l~~~~~~~~~~~~~~~~~~~~-~g~p~~i~~d~~-G~lwv~ 279 (370)
.+++++++..++++ ...+ |..||+...+. ...+.... ......+++.++ +++.++
T Consensus 174 ~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~p~~~~~l~s 232 (344)
T 4gqb_B 174 CVAASPHKDSVFLSCSEDNRILLWDTRCPKP--ASQIGCSAPGYLPTSLAWHPQQSEVFVF 232 (344)
T ss_dssp EEEECSSCTTEEEEEETTSCEEEEETTSSSC--EEECC----CCCEEEEEECSSCTTEEEE
T ss_pred EEEecCCCCCceeeeccccccccccccccce--eeeeecceeeccceeeeecCCCCcceEE
Confidence 88999988655554 4455 88899765422 12221111 112345666664 455554
No 158
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=98.63 E-value=2.1e-06 Score=80.69 Aligned_cols=174 Identities=13% Similarity=0.093 Sum_probs=102.3
Q ss_pred EcCCCcEEEEecCCeEEEEe-C---CeEEEEE--ecCCCceeceEEcC--CCcEEEEeCCC----ceEEEcCCC--eEEE
Q 017520 86 MDKNGVIYTATRDGWIKRLQ-D---GTWVNWK--FIDSQTLVGLTSTK--EGHLIICDNAN----GLHKVSEDG--VENF 151 (370)
Q Consensus 86 ~d~~G~l~v~~~~g~I~~~~-~---g~~~~~~--~~~~~p~~gl~~d~--~G~L~v~~~~~----gi~~~~~~g--~~~~ 151 (370)
.|.+|.||+++..| +++++ + ..++... ....... +|++|+ ++.||++.... +|++.+..| ++.+
T Consensus 19 ~d~~g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~-~i~~dp~~~~~l~~g~~~g~~g~gl~~s~D~G~tW~~~ 96 (394)
T 3b7f_A 19 ESGPVMLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIH-HIVQDPREPERMLMAARTGHLGPTVFRSDDGGGNWTEA 96 (394)
T ss_dssp CCSCCEEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEE-EEEECSSSTTCEEEEEEC--CCEEEEEESSTTSCCEEC
T ss_pred CCCCCEEEEEecCc-eEEEECCCCCCCceECCccCCCCceE-EEEECCCCCCeEEEEecCCCCCccEEEeCCCCCCceEC
Confidence 57789999999765 77777 3 2465542 2233456 899998 78999987654 788887555 5544
Q ss_pred Eee--cCCc-------ccccccceEEcC---CCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecC--
Q 017520 152 LSY--VNGS-------KLRFANDVVEAS---DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG-- 217 (370)
Q Consensus 152 ~~~--~~g~-------~~~~~~~l~~d~---~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~-- 217 (370)
... .... ....+..|++++ .+++|++.. .++|++.+..+..++.+...
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~------------------~ggl~~S~DgG~tW~~~~~~~~ 158 (394)
T 3b7f_A 97 TRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTS------------------PQGLFRSTDHGASWEPVAGFND 158 (394)
T ss_dssp SBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEE------------------TTEEEEESSTTSBCEECHHHHT
T ss_pred CccccCCCcccccccccccceeEEEeCCCCCCCEEEEEec------------------CCcEEEEcCCCCCeEECcCccC
Confidence 221 1111 112455688885 678999743 26799987665555554211
Q ss_pred ---------------C--CCccceEEcc-CCCEEEEEeCCc-EEEEEeCCCCCCceeeeccCC-----C-------CCCC
Q 017520 218 ---------------F--YFANGVALSR-DEDYVVVCESWK-CRKYWLKGERKGKLETFAENL-----P-------GAPD 266 (370)
Q Consensus 218 ---------------~--~~p~gi~~~~-dg~~l~v~~~~~-l~~~~~~~~~~~~~~~~~~~~-----~-------g~p~ 266 (370)
. .....|++++ +.+.+|++...+ |++.+-.+. +.+.+.... + ....
T Consensus 159 ~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s~DgG~---tW~~~~~~~~~~~~p~~~~~~g~~~~ 235 (394)
T 3b7f_A 159 HPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVFESTDAGT---DWKPLNRGCAANFLPDPNVEFGHDPH 235 (394)
T ss_dssp CTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBEEEEESSTTS---SCEECCTTCCCTTSSSSSSSSCBCEE
T ss_pred CccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCCEEEECCCCC---CceECCCCccccccCCCccccCccee
Confidence 0 0123577886 344588876555 877753332 222221111 1 0123
Q ss_pred ceeECCC--CCEEEEEec
Q 017520 267 NINLAPD--GTFWIAIIK 282 (370)
Q Consensus 267 ~i~~d~~--G~lwv~~~~ 282 (370)
.|+++++ +.+|+++..
T Consensus 236 ~i~~~~~~~~~l~vg~~~ 253 (394)
T 3b7f_A 236 CVVQHPAAPDILYQQNHC 253 (394)
T ss_dssp EEEECSSSTTEEEEEETT
T ss_pred EEEECCCCCCEEEEEcCC
Confidence 4677775 789998754
No 159
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=98.63 E-value=7.3e-06 Score=74.10 Aligned_cols=208 Identities=14% Similarity=0.107 Sum_probs=128.5
Q ss_pred CcceEEcCCCcEEEEe-c-------------CCeEEEEe-CCe-EEEEEecCCCceeceEEcCC-CcEEEEe---CC-Cc
Q 017520 81 PEDASMDKNGVIYTAT-R-------------DGWIKRLQ-DGT-WVNWKFIDSQTLVGLTSTKE-GHLIICD---NA-NG 139 (370)
Q Consensus 81 P~~i~~d~~G~l~v~~-~-------------~g~I~~~~-~g~-~~~~~~~~~~p~~gl~~d~~-G~L~v~~---~~-~g 139 (370)
+..|.++ ++.||... . .+.|++++ +|. .+.+.... +..+.++ +.||.++ .. ..
T Consensus 57 ~~~i~~~-g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~~~-----~~~~s~~g~~Iy~~~~~~~~~~~ 130 (302)
T 3s25_A 57 AMYINAD-KNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDPDP-----CIYASLIGNYIYYLHYDTQTATS 130 (302)
T ss_dssp EEEEEEC-SSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEECSC-----EEEEEEETTEEEEEEESSSSCEE
T ss_pred eeeEEEc-CCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeecCC-----ccEEEEeCCEEEEEeecCCCCce
Confidence 3445554 45677665 2 24789998 654 33332221 2333334 4688887 22 46
Q ss_pred eEEEcCCC--eEEEEeecCCcccccccceEEcCCC-cEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEec
Q 017520 140 LHKVSEDG--VENFLSYVNGSKLRFANDVVEASDG-SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD 216 (370)
Q Consensus 140 i~~~~~~g--~~~~~~~~~g~~~~~~~~l~~d~~G-~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~ 216 (370)
|++++.+| .+.+.... . .+++++| .||+++. ....|++.+.+++..+.+..
T Consensus 131 Iy~~~~dGs~~~~lt~~~-~--------~~~~~~g~~iy~t~~-----------------g~~~Iy~~~l~g~~~~~l~~ 184 (302)
T 3s25_A 131 LYRIRIDGEEKKKIKNHY-L--------FTCNTSDRYFYYNNP-----------------KNGQLYRYDTASQSEALFYD 184 (302)
T ss_dssp EEEEETTSCCCEEEESSC-C--------CCSEEETTEEEEECT-----------------TTCCEEEEETTTTEEEEEEC
T ss_pred EEEEECCCCCeEEEeCCC-c--------eEeeEECCEEEEEeC-----------------CCceEEEEECCCCCEEEEeC
Confidence 88998666 55554321 1 2335555 7999965 24689999998877776654
Q ss_pred CCCCccceEEccCCCEEEEEeCCc---EEEEEeCCCCCCceeeeccCCCCCCCceeECCCC-CEEEEEecCchhHHHhhh
Q 017520 217 GFYFANGVALSRDEDYVVVCESWK---CRKYWLKGERKGKLETFAENLPGAPDNINLAPDG-TFWIAIIKLDARRMKILN 292 (370)
Q Consensus 217 ~~~~p~gi~~~~dg~~l~v~~~~~---l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G-~lwv~~~~~~~~~~~~~~ 292 (370)
+ +....++|+++.||+++... |.+.+++|. ..+.+.+. .. ..++.+| .||.+....
T Consensus 185 ~---~~~~~~~P~g~~iy~t~~~~~~~I~~~~ldG~---~~~~Lt~~--~~---~~~~~~g~~Iy~~~~~~--------- 244 (302)
T 3s25_A 185 C---NCYKPVVLDDTNVYYMDVNRDNAIVHVNINNP---NPVVLTEA--NI---EHYNVYGSLIFYQRGGD--------- 244 (302)
T ss_dssp S---CEEEEEEEETTEEEEEEGGGTTEEEEECSSSC---CCEECSCS--CE---EEEEEETTEEEEEECSS---------
T ss_pred C---CccceeeecCCEEEEEEcCCCcEEEEEECCCC---CeEEEeCC--Cc---ceEEECCCEEEEEECCC---------
Confidence 3 22345678999999998754 999999875 23333321 11 2355555 466554332
Q ss_pred cchhHHHHHHhCCccccccccCCCceEEEEECCCCcEEEEEeCCCCCccccceeEEEECCEEEEEeCCCCeEEEEeCC
Q 017520 293 SSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIGKVQLS 370 (370)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~~g~L~~gs~~~~~i~~~~~~ 370 (370)
...|.+++.+|...+.+.... ...+...++.||........|.++++|
T Consensus 245 ------------------------~~~i~~~~~DG~~r~~l~~~~------~~~i~i~~d~Iy~td~~~~~i~~~~~d 292 (302)
T 3s25_A 245 ------------------------NPALCVVKNDGTGFKELAKGE------FCNINVTSQYVYFTDFVSNKEYCTSTQ 292 (302)
T ss_dssp ------------------------SCEEEEEETTSCCCEEEEESC------EEEEEECSSEEEEEETTTCCEEEEESS
T ss_pred ------------------------CcEEEEEECCCCccEEeeCCc------cceEEEeCCEEEEEECCCCeEEEEECC
Confidence 146888899987655554322 224556789999999888889998875
No 160
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=98.63 E-value=4.6e-05 Score=71.21 Aligned_cols=185 Identities=11% Similarity=0.049 Sum_probs=114.0
Q ss_pred CCcceEEcCCCcEEEEecCCeEEEEe--CCeEEEEEe-cC------------------CCceeceEEcCCCcEEEEeCCC
Q 017520 80 HPEDASMDKNGVIYTATRDGWIKRLQ--DGTWVNWKF-ID------------------SQTLVGLTSTKEGHLIICDNAN 138 (370)
Q Consensus 80 ~P~~i~~d~~G~l~v~~~~g~I~~~~--~g~~~~~~~-~~------------------~~p~~gl~~d~~G~L~v~~~~~ 138 (370)
...++++.++|...++..++.+..|+ +|+...... .. .... +++++++|+++++....
T Consensus 66 ~V~~v~fspdg~~la~g~~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~-~v~~s~dg~~l~s~~~d 144 (393)
T 1erj_A 66 VVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIR-SVCFSPDGKFLATGAED 144 (393)
T ss_dssp CCCEEEECTTSSEEEEECBSCEEEEETTTCCEEEEECC-----------------CCCCBEE-EEEECTTSSEEEEEETT
T ss_pred EEEEEEECCCCCEEEEEcCCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEE-EEEECCCCCEEEEEcCC
Confidence 45788999999877665567788888 565332211 10 1145 78999999866654444
Q ss_pred c-eEEEc-CCC--eEEEEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEE
Q 017520 139 G-LHKVS-EDG--VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLV 214 (370)
Q Consensus 139 g-i~~~~-~~g--~~~~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~ 214 (370)
+ |..++ .++ ...+ .+. ...+..+++.++|+..++.+ .++.|..||..+++....
T Consensus 145 ~~i~iwd~~~~~~~~~~----~~h-~~~v~~~~~~p~~~~l~s~s-----------------~d~~v~iwd~~~~~~~~~ 202 (393)
T 1erj_A 145 RLIRIWDIENRKIVMIL----QGH-EQDIYSLDYFPSGDKLVSGS-----------------GDRTVRIWDLRTGQCSLT 202 (393)
T ss_dssp SCEEEEETTTTEEEEEE----CCC-SSCEEEEEECTTSSEEEEEE-----------------TTSEEEEEETTTTEEEEE
T ss_pred CeEEEEECCCCcEEEEE----ccC-CCCEEEEEEcCCCCEEEEec-----------------CCCcEEEEECCCCeeEEE
Confidence 4 55566 555 2222 221 13578899999998766643 357899999988876554
Q ss_pred ecCCCCccceEEcc-CCCEEEEEeCCc-EEEEEeCCCCCCceeeec------cCCCCCCCceeECCCCCEEEEE-ecCch
Q 017520 215 ADGFYFANGVALSR-DEDYVVVCESWK-CRKYWLKGERKGKLETFA------ENLPGAPDNINLAPDGTFWIAI-IKLDA 285 (370)
Q Consensus 215 ~~~~~~p~gi~~~~-dg~~l~v~~~~~-l~~~~~~~~~~~~~~~~~------~~~~g~p~~i~~d~~G~lwv~~-~~~~~ 285 (370)
.........+++++ +++.+..+...+ |..||+..... ...+. .........++++++|.+.++. ..+..
T Consensus 203 ~~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~--~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v 280 (393)
T 1erj_A 203 LSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFL--VERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSV 280 (393)
T ss_dssp EECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCE--EEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred EEcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcE--EEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEE
Confidence 44444566788998 888777777777 88888764321 11111 0111224457888999765554 34433
Q ss_pred hHHH
Q 017520 286 RRMK 289 (370)
Q Consensus 286 ~~~~ 289 (370)
.+++
T Consensus 281 ~~wd 284 (393)
T 1erj_A 281 KLWN 284 (393)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4444
No 161
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=98.62 E-value=6.6e-05 Score=67.42 Aligned_cols=147 Identities=10% Similarity=0.047 Sum_probs=96.6
Q ss_pred CCCcceEEcCCCcE-EEEecCCeEEEEe--CCeE-EEEEecCCCceeceEEcCCCcEEEEeCCC-ceEEEc-CCC--eEE
Q 017520 79 NHPEDASMDKNGVI-YTATRDGWIKRLQ--DGTW-VNWKFIDSQTLVGLTSTKEGHLIICDNAN-GLHKVS-EDG--VEN 150 (370)
Q Consensus 79 ~~P~~i~~d~~G~l-~v~~~~g~I~~~~--~g~~-~~~~~~~~~p~~gl~~d~~G~L~v~~~~~-gi~~~~-~~g--~~~ 150 (370)
....++++.++|.+ ..++.+|.|..|+ +++. ..+........ .+++.++++++++.... .|..++ .++ ...
T Consensus 14 ~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~ 92 (304)
T 2ynn_A 14 DRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVR-AGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVD 92 (304)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEE-EEEEEGGGTEEEEEETTSEEEEEETTTCCEEEE
T ss_pred CceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEE-EEEEeCCCCEEEEECCCCEEEEEECCCCcEEEE
Confidence 45678999998864 4566899999999 5543 33333334455 88999999866654444 455566 556 333
Q ss_pred EEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCC-eEEEEec-CCCCccceEEcc
Q 017520 151 FLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSN-ITTLVAD-GFYFANGVALSR 228 (370)
Q Consensus 151 ~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~-~~~~~~~-~~~~p~gi~~~~ 228 (370)
+... ...++.+++.+++.+.++.+ .++.|..+|..++ ....... .......++++|
T Consensus 93 ~~~h-----~~~v~~~~~~~~~~~l~sgs-----------------~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p 150 (304)
T 2ynn_A 93 FEAH-----PDYIRSIAVHPTKPYVLSGS-----------------DDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNP 150 (304)
T ss_dssp EECC-----SSCEEEEEECSSSSEEEEEE-----------------TTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECT
T ss_pred EeCC-----CCcEEEEEEcCCCCEEEEEC-----------------CCCeEEEEECCCCcchhhhhcccCCcEEEEEECC
Confidence 3211 13578899999998777644 3577888887655 3332232 334457889998
Q ss_pred -CCCEEEEEeCCc-EEEEEeCC
Q 017520 229 -DEDYVVVCESWK-CRKYWLKG 248 (370)
Q Consensus 229 -dg~~l~v~~~~~-l~~~~~~~ 248 (370)
+++.++.+...+ |..||+..
T Consensus 151 ~~~~~l~sgs~D~~v~iwd~~~ 172 (304)
T 2ynn_A 151 KDPSTFASGCLDRTVKVWSLGQ 172 (304)
T ss_dssp TCTTEEEEEETTSEEEEEETTC
T ss_pred CCCCEEEEEeCCCeEEEEECCC
Confidence 567666666666 88888754
No 162
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.62 E-value=1.1e-05 Score=75.14 Aligned_cols=195 Identities=14% Similarity=0.108 Sum_probs=111.2
Q ss_pred CCCcceEEcCCC-cEEEEec--CCeEEEEe--CCeEEEEEecCC----Cceec----eEEcCCCcEEEEeCCCceEEEcC
Q 017520 79 NHPEDASMDKNG-VIYTATR--DGWIKRLQ--DGTWVNWKFIDS----QTLVG----LTSTKEGHLIICDNANGLHKVSE 145 (370)
Q Consensus 79 ~~P~~i~~d~~G-~l~v~~~--~g~I~~~~--~g~~~~~~~~~~----~p~~g----l~~d~~G~L~v~~~~~gi~~~~~ 145 (370)
..|+.+++++|| .+|+++. ++.|..+| ++++..-....+ .|. | ++..+||.+.+.+.. .
T Consensus 137 ~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~~~~~P~-g~~~~~~~~~DG~~~~v~~~-------~ 208 (386)
T 3sjl_D 137 TYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPT-APDTFFMHCRDGSLAKVAFG-------T 208 (386)
T ss_dssp CCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEE-ETTEEEEEETTSCEEEEECC-------S
T ss_pred CCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCcceeecC-CCceeEEECCCCCEEEEECC-------C
Confidence 379999999988 5899973 67899999 666443222221 122 1 234445543333322 1
Q ss_pred CC-eEEEEee-cCCcccccccceEEc-CCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEec------
Q 017520 146 DG-VENFLSY-VNGSKLRFANDVVEA-SDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD------ 216 (370)
Q Consensus 146 ~g-~~~~~~~-~~g~~~~~~~~l~~d-~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~------ 216 (370)
.+ +...... .........+..+++ ++|++||... .+.|+.+|..++..++...
T Consensus 209 ~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~------------------~g~V~v~d~~~~~~~v~~~~~~~~~ 270 (386)
T 3sjl_D 209 EGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTY------------------TGKIHQIDLSSGDAKFLPAVEALTE 270 (386)
T ss_dssp SSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBT------------------TSEEEEEECTTSSCEECCCEESSCH
T ss_pred CCeEEEeecceeccccccccccceeEcCCCcEEEEeC------------------CCEEEEEECCCCcceeecceecccc
Confidence 13 2111110 110001112234554 7887655432 3789999987665433211
Q ss_pred ----CCCCcc---ceEEccCCCEEEEEeC----------Cc-EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCC-E-
Q 017520 217 ----GFYFAN---GVALSRDEDYVVVCES----------WK-CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGT-F- 276 (370)
Q Consensus 217 ----~~~~p~---gi~~~~dg~~l~v~~~----------~~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~-l- 276 (370)
....|. .++++++++.+|++.. .+ |+++|.++.+.- ..+. .+..|.++++++||+ +
T Consensus 271 ~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~--~~i~--vg~~~~~lavs~D~~~~l 346 (386)
T 3sjl_D 271 AERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERL--AKFE--MGHEIDSINVSQDEKPLL 346 (386)
T ss_dssp HHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEE--EEEE--EEEEECEEEECSSSSCEE
T ss_pred ccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEE--EEEE--CCCCcceEEECCCCCeEE
Confidence 011233 4888999999999863 23 999998765321 1221 222478999999995 4
Q ss_pred EEEEecCchhHHHhhhcchhHHHHHHhCCccccccccCCCceEEEEECC-CCcEEEEEeCCC
Q 017520 277 WIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAE-DGTIIRNLVDPT 337 (370)
Q Consensus 277 wv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~-~g~~~~~~~~~~ 337 (370)
|++.... +.|..+|. .++++.++....
T Consensus 347 y~tn~~~----------------------------------~~VsViD~~t~k~~~~i~~~~ 374 (386)
T 3sjl_D 347 YALSTGD----------------------------------KTLYIHDAESGEELRSVNQLG 374 (386)
T ss_dssp EEEETTT----------------------------------TEEEEEETTTCCEEEEECCCC
T ss_pred EEEcCCC----------------------------------CeEEEEECCCCcEEEEecCCC
Confidence 5544332 45888885 689999887653
No 163
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=98.61 E-value=9.6e-05 Score=66.89 Aligned_cols=181 Identities=13% Similarity=0.115 Sum_probs=110.3
Q ss_pred CCcCCCcceEEcCCC--cEEEEecCCeEEEEe-CC---e----EEEEEecCCCceeceEEcCCCcEEEEeCCCc-eEEEc
Q 017520 76 GSVNHPEDASMDKNG--VIYTATRDGWIKRLQ-DG---T----WVNWKFIDSQTLVGLTSTKEGHLIICDNANG-LHKVS 144 (370)
Q Consensus 76 ~~~~~P~~i~~d~~G--~l~v~~~~g~I~~~~-~g---~----~~~~~~~~~~p~~gl~~d~~G~L~v~~~~~g-i~~~~ 144 (370)
|.-....++++.+++ .|..++.++.|..|+ .+ + ...+........ .+++.++|++.++....+ |..++
T Consensus 15 gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~-~~~~s~dg~~l~s~s~D~~v~~wd 93 (319)
T 3frx_A 15 GHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQ-DCTLTADGAYALSASWDKTLRLWD 93 (319)
T ss_dssp CCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEE-EEEECTTSSEEEEEETTSEEEEEE
T ss_pred cccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEE-EEEECCCCCEEEEEeCCCEEEEEE
Confidence 433345678887644 466777899999888 21 1 223333444566 899999998766544444 55555
Q ss_pred -CCC--eEEEEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecCCCCc
Q 017520 145 -EDG--VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFA 221 (370)
Q Consensus 145 -~~g--~~~~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~p 221 (370)
.++ ...+... ...+..++++++|.+.++.+ .++.|..||.++.....+.......
T Consensus 94 ~~~~~~~~~~~~h-----~~~v~~~~~~~~~~~l~s~s-----------------~D~~i~vwd~~~~~~~~~~~h~~~v 151 (319)
T 3frx_A 94 VATGETYQRFVGH-----KSDVMSVDIDKKASMIISGS-----------------RDKTIKVWTIKGQCLATLLGHNDWV 151 (319)
T ss_dssp TTTTEEEEEEECC-----SSCEEEEEECTTSCEEEEEE-----------------TTSCEEEEETTSCEEEEECCCSSCE
T ss_pred CCCCCeeEEEccC-----CCcEEEEEEcCCCCEEEEEe-----------------CCCeEEEEECCCCeEEEEeccCCcE
Confidence 566 3333221 13578899999998777754 3567888888765555444333445
Q ss_pred cceEEccC------CCEEEEEeCCc-EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCCEEEEEec
Q 017520 222 NGVALSRD------EDYVVVCESWK-CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 282 (370)
Q Consensus 222 ~gi~~~~d------g~~l~v~~~~~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~ 282 (370)
..+.+.+. +..++.+...+ |..|++...+ ....+. ...+....++++++|++.++...
T Consensus 152 ~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~--~~~~~~-~h~~~v~~~~~sp~g~~l~s~~~ 216 (319)
T 3frx_A 152 SQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQ--IEADFI-GHNSNINTLTASPDGTLIASAGK 216 (319)
T ss_dssp EEEEECCC------CCEEEEEETTSCEEEEETTTTE--EEEEEC-CCCSCEEEEEECTTSSEEEEEET
T ss_pred EEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcch--hheeec-CCCCcEEEEEEcCCCCEEEEEeC
Confidence 56777663 44566666666 8888875431 111222 22333556788999986665443
No 164
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=98.61 E-value=0.00021 Score=64.07 Aligned_cols=148 Identities=15% Similarity=0.100 Sum_probs=99.0
Q ss_pred CCCcceEEcCCCc-EEEEecCCeEEEEe--CCe-EEEEEecCCCceeceEEcCCCcEEEEeCC-CceEEEc-CCC--eEE
Q 017520 79 NHPEDASMDKNGV-IYTATRDGWIKRLQ--DGT-WVNWKFIDSQTLVGLTSTKEGHLIICDNA-NGLHKVS-EDG--VEN 150 (370)
Q Consensus 79 ~~P~~i~~d~~G~-l~v~~~~g~I~~~~--~g~-~~~~~~~~~~p~~gl~~d~~G~L~v~~~~-~gi~~~~-~~g--~~~ 150 (370)
....++++.++|+ |.+++.+|.|..|+ +++ ...+........ .+.+.++++++++... +.|..++ +++ ...
T Consensus 66 ~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~ 144 (312)
T 4ery_A 66 LGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVF-CCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKT 144 (312)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEE-EEEECSSSSEEEEEETTSCEEEEETTTCCEEEE
T ss_pred CceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEE-EEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEE
Confidence 3456788988886 44566899999999 554 344444445566 8999999986665434 4566666 555 333
Q ss_pred EEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEe-cC-CCCccceEEcc
Q 017520 151 FLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-DG-FYFANGVALSR 228 (370)
Q Consensus 151 ~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~-~~-~~~p~gi~~~~ 228 (370)
+... ...+..++++++|++.++.+ .++.|..||..+++..... .. ......+++++
T Consensus 145 ~~~~-----~~~v~~~~~~~~~~~l~~~~-----------------~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (312)
T 4ery_A 145 LPAH-----SDPVSAVHFNRDGSLIVSSS-----------------YDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP 202 (312)
T ss_dssp ECCC-----SSCEEEEEECTTSSEEEEEE-----------------TTSCEEEEETTTCCEEEEECCSSCCCEEEEEECT
T ss_pred ecCC-----CCcEEEEEEcCCCCEEEEEe-----------------CCCcEEEEECCCCceeeEEeccCCCceEEEEECC
Confidence 3111 13567889999998766643 3578899998776543322 22 22345689999
Q ss_pred CCCEEEEEeCCc-EEEEEeCCC
Q 017520 229 DEDYVVVCESWK-CRKYWLKGE 249 (370)
Q Consensus 229 dg~~l~v~~~~~-l~~~~~~~~ 249 (370)
+++.++.+...+ |..||+...
T Consensus 203 ~~~~l~~~~~d~~i~iwd~~~~ 224 (312)
T 4ery_A 203 NGKYILAATLDNTLKLWDYSKG 224 (312)
T ss_dssp TSSEEEEEETTTEEEEEETTTT
T ss_pred CCCEEEEEcCCCeEEEEECCCC
Confidence 999888887777 888987643
No 165
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.60 E-value=6.1e-05 Score=73.98 Aligned_cols=227 Identities=11% Similarity=0.094 Sum_probs=137.3
Q ss_pred CcceEEcC--CCc-EEEEecCCeEEEEe--CC------eE---EEEEecCCCceeceEEcCCCcEEEEeCCC----ceEE
Q 017520 81 PEDASMDK--NGV-IYTATRDGWIKRLQ--DG------TW---VNWKFIDSQTLVGLTSTKEGHLIICDNAN----GLHK 142 (370)
Q Consensus 81 P~~i~~d~--~G~-l~v~~~~g~I~~~~--~g------~~---~~~~~~~~~p~~gl~~d~~G~L~v~~~~~----gi~~ 142 (370)
..++++.+ +|. |.+++.+|.|..|+ ++ +. ..+........ +++++++|+.+++.... +.+.
T Consensus 67 v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~s~~~~~l~~~~~~~~~~~~v~ 145 (615)
T 1pgu_A 67 VTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPIS-DISWDFEGRRLCVVGEGRDNFGVFI 145 (615)
T ss_dssp EEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEE-EEEECTTSSEEEEEECCSSCSEEEE
T ss_pred EEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEE-EEEEeCCCCEEEEeccCCCCccEEE
Confidence 57889999 886 45566899999998 44 22 22222344566 89999999865543332 3333
Q ss_pred EcCCC--eEEEEeecCCcccccccceEEcCCCc-EEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecCCC
Q 017520 143 VSEDG--VENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFY 219 (370)
Q Consensus 143 ~~~~g--~~~~~~~~~g~~~~~~~~l~~d~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~ 219 (370)
+...+ ...+ .+. ...+..+++.++|. +.++.+ .++.|..||..+++.........
T Consensus 146 ~~d~~~~~~~~----~~~-~~~v~~~~~~~~~~~~l~~~~-----------------~d~~v~vwd~~~~~~~~~~~~~~ 203 (615)
T 1pgu_A 146 SWDSGNSLGEV----SGH-SQRINACHLKQSRPMRSMTVG-----------------DDGSVVFYQGPPFKFSASDRTHH 203 (615)
T ss_dssp ETTTCCEEEEC----CSC-SSCEEEEEECSSSSCEEEEEE-----------------TTTEEEEEETTTBEEEEEECSSS
T ss_pred EEECCCcceee----ecC-CccEEEEEECCCCCcEEEEEe-----------------CCCcEEEEeCCCcceeeeecccC
Confidence 33344 3322 111 23578899999996 555533 35789999988776554444332
Q ss_pred ----CccceEEccC-CCEEEEEeCCc-EEEEEeCCCCCCceeeecc---CCCCCCCceeECCCCCEEEEEecCchhHHHh
Q 017520 220 ----FANGVALSRD-EDYVVVCESWK-CRKYWLKGERKGKLETFAE---NLPGAPDNINLAPDGTFWIAIIKLDARRMKI 290 (370)
Q Consensus 220 ----~p~gi~~~~d-g~~l~v~~~~~-l~~~~~~~~~~~~~~~~~~---~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~ 290 (370)
....++++++ ++.++.+...+ |..|++...+ ....+.. ...+....+++. +|++.++....
T Consensus 204 ~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~--~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d------- 273 (615)
T 1pgu_A 204 KQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGE--FLKYIEDDQEPVQGGIFALSWL-DSQKFATVGAD------- 273 (615)
T ss_dssp CTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCC--EEEECCBTTBCCCSCEEEEEES-SSSEEEEEETT-------
T ss_pred CCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCC--EeEEecccccccCCceEEEEEc-CCCEEEEEcCC-------
Confidence 4578999999 99888777777 9999976532 1222211 223335567888 88766665432
Q ss_pred hhcchhHHHHHHhCCccccccccCCCceEEEEECC-CCcEEEEEeCCCCCccccceeEEE-ECCEEEEEeCCCCeEEEEe
Q 017520 291 LNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQ-VDNHLYVISLTSNFIGKVQ 368 (370)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~-~g~~~~~~~~~~g~~~~~~t~~~~-~~g~L~~gs~~~~~i~~~~ 368 (370)
+.+..+|. .++.+..+..........+..+.. .++.+..++..+ .|..++
T Consensus 274 ---------------------------~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g-~i~~~d 325 (615)
T 1pgu_A 274 ---------------------------ATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDG-TLNFYE 325 (615)
T ss_dssp ---------------------------SEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTS-CEEEEE
T ss_pred ---------------------------CcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEECCC-CEEEEE
Confidence 34677774 478888877653332333444433 445666666543 344443
No 166
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.60 E-value=5.8e-06 Score=83.84 Aligned_cols=135 Identities=10% Similarity=0.023 Sum_probs=86.6
Q ss_pred CCcceEEcCCCc-EEEEec-CC-----eEEEEe--CCeEEEEEecC-C------------------------CceeceEE
Q 017520 80 HPEDASMDKNGV-IYTATR-DG-----WIKRLQ--DGTWVNWKFID-S------------------------QTLVGLTS 125 (370)
Q Consensus 80 ~P~~i~~d~~G~-l~v~~~-~g-----~I~~~~--~g~~~~~~~~~-~------------------------~p~~gl~~ 125 (370)
.+.++++.+||. |+++.. +| .|+.++ +|+........ . ... ++++
T Consensus 38 ~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~ 116 (741)
T 2ecf_A 38 TLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIV-DYQW 116 (741)
T ss_dssp CCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESC-CCEE
T ss_pred CCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcc-eeEE
Confidence 577899999996 666665 66 799999 66655444321 1 145 8999
Q ss_pred cCCCcEEEEeCCCceEEEc-CCCe--EEEEeecCCcccccccceEEcCCCc-EEEEeCCCCCCCccceecccccCCCceE
Q 017520 126 TKEGHLIICDNANGLHKVS-EDGV--ENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQL 201 (370)
Q Consensus 126 d~~G~L~v~~~~~gi~~~~-~~g~--~~~~~~~~g~~~~~~~~l~~d~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~l 201 (370)
++||+..+......|+.++ .++. ... . .... ...+..++++|||+ |.++. .+.|
T Consensus 117 SpDg~~l~~~~~~~i~~~d~~~~~~~~~~-~-l~~~-~~~~~~~~~SPDG~~la~~~-------------------~~~i 174 (741)
T 2ecf_A 117 SPDAQRLLFPLGGELYLYDLKQEGKAAVR-Q-LTHG-EGFATDAKLSPKGGFVSFIR-------------------GRNL 174 (741)
T ss_dssp CTTSSEEEEEETTEEEEEESSSCSTTSCC-B-CCCS-SSCEEEEEECTTSSEEEEEE-------------------TTEE
T ss_pred CCCCCEEEEEeCCcEEEEECCCCCcceEE-E-cccC-CcccccccCCCCCCEEEEEe-------------------CCcE
Confidence 9999744433345677777 3331 110 0 0111 13467889999997 54442 2479
Q ss_pred EEEeCCCCeEEEEecCCCC-----------------ccceEEccCCCEEEEEe
Q 017520 202 LKYDPSSNITTLVADGFYF-----------------ANGVALSRDEDYVVVCE 237 (370)
Q Consensus 202 ~~~d~~t~~~~~~~~~~~~-----------------p~gi~~~~dg~~l~v~~ 237 (370)
+.+|.++++...+...... +.+++++|||+.|+++.
T Consensus 175 ~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~ 227 (741)
T 2ecf_A 175 WVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYAR 227 (741)
T ss_dssp EEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEE
T ss_pred EEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEE
Confidence 9999988776655432221 47799999999888774
No 167
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=98.60 E-value=2.6e-05 Score=79.63 Aligned_cols=178 Identities=10% Similarity=0.064 Sum_probs=112.4
Q ss_pred CCCcceEEcCCCc-EEEEecCCeEEEEe--CCeE-EEEEecCCCceeceEEcCCCcEEEE-eCCCceEEEc-CCC--eEE
Q 017520 79 NHPEDASMDKNGV-IYTATRDGWIKRLQ--DGTW-VNWKFIDSQTLVGLTSTKEGHLIIC-DNANGLHKVS-EDG--VEN 150 (370)
Q Consensus 79 ~~P~~i~~d~~G~-l~v~~~~g~I~~~~--~g~~-~~~~~~~~~p~~gl~~d~~G~L~v~-~~~~gi~~~~-~~g--~~~ 150 (370)
....++++.++|. |.+++.+|.|..|+ +++. ..+....+... +++++++|+.+++ ...+.|..++ .++ ...
T Consensus 14 ~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~-~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~ 92 (814)
T 3mkq_A 14 DRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVR-AGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVD 92 (814)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEE-EEEEEGGGTEEEEEETTSEEEEEETTTCCEEEE
T ss_pred CceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEE-EEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEE
Confidence 4577899999886 55666889999999 5653 44444455566 9999999985554 4334466666 566 333
Q ss_pred EEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCC-eEEEEe-cCCCCccceEEcc
Q 017520 151 FLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSN-ITTLVA-DGFYFANGVALSR 228 (370)
Q Consensus 151 ~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~-~~~~~~-~~~~~p~gi~~~~ 228 (370)
+... ...+..+++.++|...++.+ .++.|..||.+++ ...... ........+++++
T Consensus 93 ~~~~-----~~~v~~~~~s~~~~~l~~~~-----------------~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p 150 (814)
T 3mkq_A 93 FEAH-----PDYIRSIAVHPTKPYVLSGS-----------------DDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNP 150 (814)
T ss_dssp EECC-----SSCEEEEEECSSSSEEEEEE-----------------TTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEET
T ss_pred EecC-----CCCEEEEEEeCCCCEEEEEc-----------------CCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEc
Confidence 3211 13577899999997555432 3478888887765 333332 3334467889999
Q ss_pred -CCCEEEEEeCCc-EEEEEeCCCCCCceeeeccCCCCCCCceeECC--CCCEEEEEe
Q 017520 229 -DEDYVVVCESWK-CRKYWLKGERKGKLETFAENLPGAPDNINLAP--DGTFWIAII 281 (370)
Q Consensus 229 -dg~~l~v~~~~~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~--~G~lwv~~~ 281 (370)
+++.++.+...+ |..|++.+... ...+..........+++.+ +|++.++..
T Consensus 151 ~~~~~l~~~~~dg~v~vwd~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~ 205 (814)
T 3mkq_A 151 KDPSTFASGCLDRTVKVWSLGQSTP--NFTLTTGQERGVNYVDYYPLPDKPYMITAS 205 (814)
T ss_dssp TEEEEEEEEETTSEEEEEETTCSSC--SEEEECCCTTCCCEEEECCSTTCCEEEEEC
T ss_pred CCCCEEEEEeCCCeEEEEECCCCcc--eeEEecCCCCCEEEEEEEECCCCCEEEEEe
Confidence 777777777777 99998765422 1122212223355677776 777555543
No 168
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=98.59 E-value=5e-05 Score=71.45 Aligned_cols=148 Identities=11% Similarity=0.126 Sum_probs=99.5
Q ss_pred CCCcceEEcCCCcEE-EEecCCeEEEEe--CCeE-EEEEecCCCceeceEEcCCCcEEEEeCCC-ceEEEc-CCC--eEE
Q 017520 79 NHPEDASMDKNGVIY-TATRDGWIKRLQ--DGTW-VNWKFIDSQTLVGLTSTKEGHLIICDNAN-GLHKVS-EDG--VEN 150 (370)
Q Consensus 79 ~~P~~i~~d~~G~l~-v~~~~g~I~~~~--~g~~-~~~~~~~~~p~~gl~~d~~G~L~v~~~~~-gi~~~~-~~g--~~~ 150 (370)
....++++.+++.+. .++.+|.|..|+ +++. ..+....+... +++++++|+++++.... -|..++ .++ +..
T Consensus 109 ~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~-~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~ 187 (410)
T 1vyh_C 109 SPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQ-DISFDHSGKLLASCSADMTIKLWDFQGFECIRT 187 (410)
T ss_dssp SCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEE-EEEECTTSSEEEEEETTSCCCEEETTSSCEEEC
T ss_pred CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEE-EEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEE
Confidence 356678899887654 556899999999 5653 34444445567 89999999876654444 455555 444 222
Q ss_pred EEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEe-cCCCCccceEEccC
Q 017520 151 FLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-DGFYFANGVALSRD 229 (370)
Q Consensus 151 ~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~-~~~~~p~gi~~~~d 229 (370)
+ .+. ...+..+++.++|+..++.+ .++.|..||..++...... ........+.++++
T Consensus 188 ~----~~h-~~~V~~v~~~p~~~~l~s~s-----------------~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~ 245 (410)
T 1vyh_C 188 M----HGH-DHNVSSVSIMPNGDHIVSAS-----------------RDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQD 245 (410)
T ss_dssp C----CCC-SSCEEEEEECSSSSEEEEEE-----------------TTSEEEEEETTTCCEEEEEECCSSCEEEEEECTT
T ss_pred E----cCC-CCCEEEEEEeCCCCEEEEEe-----------------CCCeEEEEECCCCcEEEEEeCCCccEEEEEECCC
Confidence 2 221 13678899999998776643 4578999998877654333 33334567889999
Q ss_pred CCEEEEEeCCc-EEEEEeCCC
Q 017520 230 EDYVVVCESWK-CRKYWLKGE 249 (370)
Q Consensus 230 g~~l~v~~~~~-l~~~~~~~~ 249 (370)
++.++.+...+ |..|++...
T Consensus 246 g~~l~s~s~D~~v~vwd~~~~ 266 (410)
T 1vyh_C 246 GTLIASCSNDQTVRVWVVATK 266 (410)
T ss_dssp SSEEEEEETTSCEEEEETTTC
T ss_pred CCEEEEEcCCCeEEEEECCCC
Confidence 99777777777 888887543
No 169
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=98.58 E-value=1.5e-05 Score=73.80 Aligned_cols=182 Identities=8% Similarity=-0.021 Sum_probs=116.3
Q ss_pred CCCcceEEcCCC--cEEEEecCCeEEEEe--CCeEEEEEe---cCCCceeceEEcC-CCcEEE-EeCCCceEEEc-CCC-
Q 017520 79 NHPEDASMDKNG--VIYTATRDGWIKRLQ--DGTWVNWKF---IDSQTLVGLTSTK-EGHLII-CDNANGLHKVS-EDG- 147 (370)
Q Consensus 79 ~~P~~i~~d~~G--~l~v~~~~g~I~~~~--~g~~~~~~~---~~~~p~~gl~~d~-~G~L~v-~~~~~gi~~~~-~~g- 147 (370)
....++++.++| .|.+++.+|.|..|+ +++...... ..+... ++++.+ ++++++ +..++.|..++ .+.
T Consensus 74 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~ 152 (383)
T 3ei3_B 74 RRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAIT-GMKFNQFNTNQLFVSSIRGATTLRDFSGSV 152 (383)
T ss_dssp SCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEE-EEEEETTEEEEEEEEETTTEEEEEETTSCE
T ss_pred CCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCcee-EEEeCCCCCCEEEEEeCCCEEEEEECCCCc
Confidence 456778899887 566777899999999 454443332 344566 899998 556555 44444455566 433
Q ss_pred eEEEEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecCCCCccceEEc
Q 017520 148 VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALS 227 (370)
Q Consensus 148 ~~~~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~p~gi~~~ 227 (370)
...+... .+ ....+..+++.++|+..++.+ .++.|..||........+.........++++
T Consensus 153 ~~~~~~~-~~-~~~~v~~~~~~~~~~~l~~~~-----------------~d~~i~i~d~~~~~~~~~~~h~~~v~~~~~~ 213 (383)
T 3ei3_B 153 IQVFAKT-DS-WDYWYCCVDVSVSRQMLATGD-----------------STGRLLLLGLDGHEIFKEKLHKAKVTHAEFN 213 (383)
T ss_dssp EEEEECC-CC-SSCCEEEEEEETTTTEEEEEE-----------------TTSEEEEEETTSCEEEEEECSSSCEEEEEEC
T ss_pred eEEEecc-CC-CCCCeEEEEECCCCCEEEEEC-----------------CCCCEEEEECCCCEEEEeccCCCcEEEEEEC
Confidence 4444322 11 113577899999998666643 3578999998755555555445567889999
Q ss_pred cCCC-EEEEEeCCc-EEEEEeCCCCC-CceeeeccCCCCCCCceeECC-CCCEEEEEe
Q 017520 228 RDED-YVVVCESWK-CRKYWLKGERK-GKLETFAENLPGAPDNINLAP-DGTFWIAII 281 (370)
Q Consensus 228 ~dg~-~l~v~~~~~-l~~~~~~~~~~-~~~~~~~~~~~g~p~~i~~d~-~G~lwv~~~ 281 (370)
++++ .++.+...+ |..||+...+. +...... ...+....+++++ +|++.++..
T Consensus 214 ~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~ 270 (383)
T 3ei3_B 214 PRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTD 270 (383)
T ss_dssp SSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEE
T ss_pred CCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEc
Confidence 9998 677777777 99999875321 1221111 2333456788899 887655543
No 170
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=98.58 E-value=3.6e-07 Score=88.20 Aligned_cols=76 Identities=17% Similarity=0.163 Sum_probs=58.4
Q ss_pred CcccccccceEEcCCCcEEE-EeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecC--CCCccceEEccCCCEE
Q 017520 157 GSKLRFANDVVEASDGSLYF-TVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG--FYFANGVALSRDEDYV 233 (370)
Q Consensus 157 g~~~~~~~~l~~d~~G~l~v-~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~--~~~p~gi~~~~dg~~l 233 (370)
+.++++|++|++|++|+||| +|.+ ++.. ...+...+..|+++++++++++.++.. ...|+|++++||++.|
T Consensus 472 ~~~fnsPDnL~fd~~G~LWf~TD~~--~~~~----g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktL 545 (592)
T 4a9v_A 472 QNMFNSPDGLGFDKAGRLWILTDGD--SSNA----GDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTL 545 (592)
T ss_dssp TTCCCCEEEEEECTTCCEEEEECCC--CCCS----GGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEE
T ss_pred cCccCCCCceEECCCCCEEEEeCCC--cCcc----ccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEE
Confidence 34688999999999999999 7764 2211 112233556899999998999887754 4678999999999999
Q ss_pred EEEeC
Q 017520 234 VVCES 238 (370)
Q Consensus 234 ~v~~~ 238 (370)
||+-.
T Consensus 546 fV~vQ 550 (592)
T 4a9v_A 546 FVGIQ 550 (592)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99874
No 171
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=98.58 E-value=3.3e-05 Score=72.03 Aligned_cols=233 Identities=9% Similarity=0.034 Sum_probs=135.2
Q ss_pred CCcceEEcCCCc-EEEEecCCeEEEEe-CC------eEEEEEecCCCceeceEEcCC-CcEEEEeCCC-ceEEEc-CCCe
Q 017520 80 HPEDASMDKNGV-IYTATRDGWIKRLQ-DG------TWVNWKFIDSQTLVGLTSTKE-GHLIICDNAN-GLHKVS-EDGV 148 (370)
Q Consensus 80 ~P~~i~~d~~G~-l~v~~~~g~I~~~~-~g------~~~~~~~~~~~p~~gl~~d~~-G~L~v~~~~~-gi~~~~-~~g~ 148 (370)
...++++.++|. |.+++.+|.|..|+ .. ....+........ .+++.++ ++++++.... .|..++ .++.
T Consensus 69 ~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~ 147 (416)
T 2pm9_A 69 KFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVK-TVKFNAKQDNVLASGGNNGEIFIWDMNKCT 147 (416)
T ss_dssp CEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCC-EEEECSSSTTBEEEECSSSCEEBCBTTTTS
T ss_pred ceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceE-EEEEcCCCCCEEEEEcCCCeEEEEECCCCc
Confidence 456788888775 55667889999998 32 2333333445566 8999987 6665554444 455555 3332
Q ss_pred ------EEEEeecCCcccccccceEEcCC-CcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecC----
Q 017520 149 ------ENFLSYVNGSKLRFANDVVEASD-GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG---- 217 (370)
Q Consensus 149 ------~~~~~~~~g~~~~~~~~l~~d~~-G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~---- 217 (370)
..+...........+..+++.++ ++++++.. .++.|..||..+++.......
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-----------------~dg~v~iwd~~~~~~~~~~~~~~~~ 210 (416)
T 2pm9_A 148 ESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAG-----------------SSNFASIWDLKAKKEVIHLSYTSPN 210 (416)
T ss_dssp SCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEES-----------------SSSCEEEEETTTTEEEEEECCCCCS
T ss_pred cccccccccccccccCCCCCeeEEEeCCCCCcEEEEEc-----------------CCCCEEEEECCCCCcceEEeccccc
Confidence 21111000111246788999998 57776643 357899999887765444332
Q ss_pred ---CCCccceEEccCC-CEEEEEeCC----cEEEEEeCCCCCCceeeeccCCCCCCCceeECC-CCCEEEEEecCchhHH
Q 017520 218 ---FYFANGVALSRDE-DYVVVCESW----KCRKYWLKGERKGKLETFAENLPGAPDNINLAP-DGTFWIAIIKLDARRM 288 (370)
Q Consensus 218 ---~~~p~gi~~~~dg-~~l~v~~~~----~l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~-~G~lwv~~~~~~~~~~ 288 (370)
......+++++++ ..++.+... .|..|++..... ....+..........+++++ +|++.++....
T Consensus 211 ~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~-~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d----- 284 (416)
T 2pm9_A 211 SGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANT-PLQTLNQGHQKGILSLDWCHQDEHLLLSSGRD----- 284 (416)
T ss_dssp SCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTS-CSBCCCSCCSSCEEEEEECSSCSSCEEEEESS-----
T ss_pred cccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCC-CcEEeecCccCceeEEEeCCCCCCeEEEEeCC-----
Confidence 3446789999997 456655554 488888765311 11111101223355678887 77655554432
Q ss_pred HhhhcchhHHHHHHhCCccccccccCCCceEEEEEC-CCCcEEEEEeCCCCCccccceeEEEE-CC-EEEEEeCCCCeEE
Q 017520 289 KILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVA-EDGTIIRNLVDPTGQLMSFVTSGLQV-DN-HLYVISLTSNFIG 365 (370)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~-~~g~~~~~~~~~~g~~~~~~t~~~~~-~g-~L~~gs~~~~~i~ 365 (370)
+.+..+| ..++.+..+....+ .++.+... ++ .+++..-....|.
T Consensus 285 -----------------------------g~v~~wd~~~~~~~~~~~~~~~----~v~~~~~s~~~~~~l~s~~~d~~i~ 331 (416)
T 2pm9_A 285 -----------------------------NTVLLWNPESAEQLSQFPARGN----WCFKTKFAPEAPDLFACASFDNKIE 331 (416)
T ss_dssp -----------------------------SEEEEECSSSCCEEEEEECSSS----CCCCEEECTTCTTEEEECCSSSEEE
T ss_pred -----------------------------CCEEEeeCCCCccceeecCCCC----ceEEEEECCCCCCEEEEEecCCcEE
Confidence 3567777 45777777765443 34444444 23 4444444455565
Q ss_pred EEeC
Q 017520 366 KVQL 369 (370)
Q Consensus 366 ~~~~ 369 (370)
+.++
T Consensus 332 iw~~ 335 (416)
T 2pm9_A 332 VQTL 335 (416)
T ss_dssp EEES
T ss_pred EEEc
Confidence 5554
No 172
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.57 E-value=3.1e-05 Score=76.06 Aligned_cols=184 Identities=14% Similarity=0.034 Sum_probs=109.0
Q ss_pred CCCcceEEcCCCcEEEEecCCeEEEEe--CC----e-EEEEEecCCC-ceeceEEcC--CCcEEEEeCCCc-eEEEc-CC
Q 017520 79 NHPEDASMDKNGVIYTATRDGWIKRLQ--DG----T-WVNWKFIDSQ-TLVGLTSTK--EGHLIICDNANG-LHKVS-ED 146 (370)
Q Consensus 79 ~~P~~i~~d~~G~l~v~~~~g~I~~~~--~g----~-~~~~~~~~~~-p~~gl~~d~--~G~L~v~~~~~g-i~~~~-~~ 146 (370)
..+.+++++++|++.+...++.|..++ ++ + ...+...... +. ++++++ +|+++++....| |..++ .+
T Consensus 19 ~~v~~~~~spdg~~l~~~~~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~-~~~~sp~~~~~~l~s~~~dg~v~vw~~~~ 97 (615)
T 1pgu_A 19 NFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVT-TVKFSPIKGSQYLCSGDESGKVIVWGWTF 97 (615)
T ss_dssp TCCCCCEEETTTTEEEEEETTEEEEEECCSSCCSSCSEEEECTTTTSCEE-EEEECSSTTCCEEEEEETTSEEEEEEEEE
T ss_pred CceeEEEECCCCCEEEEecCCeEEEEECCCCCCccccceEEecCCCceEE-EEEECcCCCCCEEEEecCCCEEEEEeCCC
Confidence 467889999999766555578899998 55 3 4444444555 67 999999 998666543444 44444 22
Q ss_pred C------eEEEEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecCCCC
Q 017520 147 G------VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYF 220 (370)
Q Consensus 147 g------~~~~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~ 220 (370)
+ .........+. ...+..++++++|+..++.... ....+.|+.+|.. .....+......
T Consensus 98 ~~~~~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~~~~-------------~~~~~~v~~~d~~-~~~~~~~~~~~~ 162 (615)
T 1pgu_A 98 DKESNSVEVNVKSEFQVL-AGPISDISWDFEGRRLCVVGEG-------------RDNFGVFISWDSG-NSLGEVSGHSQR 162 (615)
T ss_dssp EGGGTEEEEEEEEEEECC-SSCEEEEEECTTSSEEEEEECC-------------SSCSEEEEETTTC-CEEEECCSCSSC
T ss_pred Ccccccccccccchhhcc-cccEEEEEEeCCCCEEEEeccC-------------CCCccEEEEEECC-CcceeeecCCcc
Confidence 1 11111111111 2357889999999866654320 0123578888732 344444333445
Q ss_pred ccceEEccCCC-EEEEEeCCc-EEEEEeCCCCCCceeeeccCCCC---CCCceeECCC-CCEEEEEe
Q 017520 221 ANGVALSRDED-YVVVCESWK-CRKYWLKGERKGKLETFAENLPG---APDNINLAPD-GTFWIAII 281 (370)
Q Consensus 221 p~gi~~~~dg~-~l~v~~~~~-l~~~~~~~~~~~~~~~~~~~~~g---~p~~i~~d~~-G~lwv~~~ 281 (370)
...++++++++ .++.+...+ |..|++...+ ....+. ...+ ....++++++ |++.++..
T Consensus 163 v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~--~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~~~~ 226 (615)
T 1pgu_A 163 INACHLKQSRPMRSMTVGDDGSVVFYQGPPFK--FSASDR-THHKQGSFVRDVEFSPDSGEFVITVG 226 (615)
T ss_dssp EEEEEECSSSSCEEEEEETTTEEEEEETTTBE--EEEEEC-SSSCTTCCEEEEEECSTTCCEEEEEE
T ss_pred EEEEEECCCCCcEEEEEeCCCcEEEEeCCCcc--eeeeec-ccCCCCceEEEEEECCCCCCEEEEEe
Confidence 67899999997 566666666 8888865421 112221 2222 3456788998 87655543
No 173
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.57 E-value=6e-06 Score=83.75 Aligned_cols=195 Identities=10% Similarity=0.033 Sum_probs=110.0
Q ss_pred CcceEEcCCCcEEEEecCCeEEEEe--CC---eEEEEEecCCCceeceEEcCCCcEEEEeCCCceEEEc-CCC-eEEEEe
Q 017520 81 PEDASMDKNGVIYTATRDGWIKRLQ--DG---TWVNWKFIDSQTLVGLTSTKEGHLIICDNANGLHKVS-EDG-VENFLS 153 (370)
Q Consensus 81 P~~i~~d~~G~l~v~~~~g~I~~~~--~g---~~~~~~~~~~~p~~gl~~d~~G~L~v~~~~~gi~~~~-~~g-~~~~~~ 153 (370)
..++++++||+..+...++.|+.++ ++ +...+......+. .+++++||+..+......|+.++ .+| ...+..
T Consensus 111 v~~~~~SpDg~~l~~~~~~~i~~~d~~~~~~~~~~~l~~~~~~~~-~~~~SPDG~~la~~~~~~i~~~d~~~g~~~~~~~ 189 (741)
T 2ecf_A 111 IVDYQWSPDAQRLLFPLGGELYLYDLKQEGKAAVRQLTHGEGFAT-DAKLSPKGGFVSFIRGRNLWVIDLASGRQMQLTA 189 (741)
T ss_dssp SCCCEECTTSSEEEEEETTEEEEEESSSCSTTSCCBCCCSSSCEE-EEEECTTSSEEEEEETTEEEEEETTTTEEEECCC
T ss_pred cceeEECCCCCEEEEEeCCcEEEEECCCCCcceEEEcccCCcccc-cccCCCCCCEEEEEeCCcEEEEecCCCCEEEecc
Confidence 4678999999744433358999999 55 5554444445567 89999999844433345788888 556 433322
Q ss_pred ecCCc------------ccccccceEEcCCCc-EEEEeCCCCCCCccc-----------eecc-----cccCCCceEEEE
Q 017520 154 YVNGS------------KLRFANDVVEASDGS-LYFTVSSSKYLPHEY-----------CLDI-----LEGKPHGQLLKY 204 (370)
Q Consensus 154 ~~~g~------------~~~~~~~l~~d~~G~-l~v~d~~~~~~~~~~-----------~~~~-----~~~~~~g~l~~~ 204 (370)
..... .+..+..++++|||+ |+++..... ....+ ...+ -+......|+.+
T Consensus 190 ~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~-~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~ 268 (741)
T 2ecf_A 190 DGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDES-PVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVI 268 (741)
T ss_dssp CCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECT-TSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEE
T ss_pred CCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCC-CCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEE
Confidence 11100 011257799999996 666532100 00000 0000 000112278889
Q ss_pred eCCC-CeEEEEecC---CCCccceEEccCCCEEEEEeC--C---c-EEEEEeCCCCCCceeeeccCCCC---CCCceeEC
Q 017520 205 DPSS-NITTLVADG---FYFANGVALSRDEDYVVVCES--W---K-CRKYWLKGERKGKLETFAENLPG---APDNINLA 271 (370)
Q Consensus 205 d~~t-~~~~~~~~~---~~~p~gi~~~~dg~~l~v~~~--~---~-l~~~~~~~~~~~~~~~~~~~~~g---~p~~i~~d 271 (370)
|.++ ++...+... ......+++ +||+.|+++.. . . |+.+|+++.+. ...+.....+ ....++++
T Consensus 269 d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~--~~~~~~~~~~~~~~~~~~~~s 345 (741)
T 2ecf_A 269 SPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQ--RVLAHETSPTWVPLHNSLRFL 345 (741)
T ss_dssp CSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCE--EEEEEEECSSCCCCCSCCEEC
T ss_pred ECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCce--EEEEEcCCCCcCCcCCceEEC
Confidence 9887 776554322 234567899 99998887754 1 2 88888765422 1111111111 23578889
Q ss_pred CCCCEEEEE
Q 017520 272 PDGTFWIAI 280 (370)
Q Consensus 272 ~~G~lwv~~ 280 (370)
+||++++..
T Consensus 346 pdg~~~~~~ 354 (741)
T 2ecf_A 346 DDGSILWSS 354 (741)
T ss_dssp TTSCEEEEE
T ss_pred CCCeEEEEe
Confidence 999855544
No 174
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=98.56 E-value=9.4e-06 Score=76.04 Aligned_cols=148 Identities=11% Similarity=-0.012 Sum_probs=93.9
Q ss_pred CCcceEEcCCC-cEEEEecCCeEEEEe--CCeEEEEEecCCCceeceEEcCCCcEEEEeCC-CceEEEc-CCC-eEEEEe
Q 017520 80 HPEDASMDKNG-VIYTATRDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGHLIICDNA-NGLHKVS-EDG-VENFLS 153 (370)
Q Consensus 80 ~P~~i~~d~~G-~l~v~~~~g~I~~~~--~g~~~~~~~~~~~p~~gl~~d~~G~L~v~~~~-~gi~~~~-~~g-~~~~~~ 153 (370)
...+++++++| .|++++.+|.|..++ +++............ ..++.++|+++++... +.|..++ .++ .....
T Consensus 58 ~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~- 135 (420)
T 3vl1_A 58 AGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRADYTA-VDTAKLQMRRFILGTTEGDIKVLDSNFNLQREID- 135 (420)
T ss_dssp CCTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSCCEEE-EEEECSSSCEEEEEETTSCEEEECTTSCEEEEET-
T ss_pred cccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecCCceE-EEEEecCCCEEEEEECCCCEEEEeCCCcceeeec-
Confidence 34578999876 577888899999998 322211111111122 3466788876554434 4466666 455 32221
Q ss_pred ecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEE-EEecCCCCccceEEccCCCE
Q 017520 154 YVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITT-LVADGFYFANGVALSRDEDY 232 (370)
Q Consensus 154 ~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~-~~~~~~~~p~gi~~~~dg~~ 232 (370)
.+. ...+..+++.++|++.++.+ .++.|..||..+++.. .+.........++++++++.
T Consensus 136 --~~h-~~~v~~~~~~~~~~~l~s~s-----------------~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 195 (420)
T 3vl1_A 136 --QAH-VSEITKLKFFPSGEALISSS-----------------QDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRN 195 (420)
T ss_dssp --TSS-SSCEEEEEECTTSSEEEEEE-----------------TTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTE
T ss_pred --ccc-cCccEEEEECCCCCEEEEEe-----------------CCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCE
Confidence 111 24678899999998666643 3578999998766543 33333445678999999998
Q ss_pred EEEEeCCc-EEEEEeCCC
Q 017520 233 VVVCESWK-CRKYWLKGE 249 (370)
Q Consensus 233 l~v~~~~~-l~~~~~~~~ 249 (370)
++.+...+ |..||+...
T Consensus 196 l~s~~~d~~v~iwd~~~~ 213 (420)
T 3vl1_A 196 VLSASLDGTIRLWECGTG 213 (420)
T ss_dssp EEEEETTSCEEEEETTTT
T ss_pred EEEEcCCCcEEEeECCCC
Confidence 88777777 888987643
No 175
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.56 E-value=0.0002 Score=66.80 Aligned_cols=168 Identities=9% Similarity=-0.030 Sum_probs=104.1
Q ss_pred eEEcCCCcEEEEecCCeEEEEe--CCeEEEEEec--CCCceeceEEcCCCcEEE-EeCCCceEEEc-CCC--eEEEEeec
Q 017520 84 ASMDKNGVIYTATRDGWIKRLQ--DGTWVNWKFI--DSQTLVGLTSTKEGHLII-CDNANGLHKVS-EDG--VENFLSYV 155 (370)
Q Consensus 84 i~~d~~G~l~v~~~~g~I~~~~--~g~~~~~~~~--~~~p~~gl~~d~~G~L~v-~~~~~gi~~~~-~~g--~~~~~~~~ 155 (370)
+..++ +.+.++..+|.|+.|+ +++....... ..... ++++.++|++++ +...+.|..++ .++ ...+.
T Consensus 99 ~~~s~-~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~-~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~--- 173 (401)
T 4aez_A 99 LDWSN-LNVVAVALERNVYVWNADSGSVSALAETDESTYVA-SVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMA--- 173 (401)
T ss_dssp EEECT-TSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEE-EEEECTTSSEEEEEETTSCEEEEETTTCCEEEEEC---
T ss_pred EeecC-CCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEE-EEEECCCCCEEEEECCCCeEEEEECcCCeEEEEec---
Confidence 45544 5688888899999999 6665544333 34566 899999997555 44444466666 555 33332
Q ss_pred CCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCC-C-eEEEEecCCCCccceEEccCCCEE
Q 017520 156 NGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSS-N-ITTLVADGFYFANGVALSRDEDYV 233 (370)
Q Consensus 156 ~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t-~-~~~~~~~~~~~p~gi~~~~dg~~l 233 (370)
+. ...+..++++ +++.++.+ .++.|..+|..+ + ....+.........++++++++.+
T Consensus 174 -~~-~~~v~~~~~~--~~~l~~~~-----------------~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 232 (401)
T 4aez_A 174 -GH-QARVGCLSWN--RHVLSSGS-----------------RSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQL 232 (401)
T ss_dssp -CC-SSCEEEEEEE--TTEEEEEE-----------------TTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEE
T ss_pred -CC-CCceEEEEEC--CCEEEEEc-----------------CCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEE
Confidence 11 1345667773 45444432 357888999863 2 233333344456789999999988
Q ss_pred EEEeCCc-EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCC-EEEEE
Q 017520 234 VVCESWK-CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGT-FWIAI 280 (370)
Q Consensus 234 ~v~~~~~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~-lwv~~ 280 (370)
+.+...+ |..||+...+ ....+. ........+++.++|. +.++.
T Consensus 233 ~s~~~d~~v~iwd~~~~~--~~~~~~-~~~~~v~~~~~~p~~~~ll~~~ 278 (401)
T 4aez_A 233 ASGGNDNVVQIWDARSSI--PKFTKT-NHNAAVKAVAWCPWQSNLLATG 278 (401)
T ss_dssp EEEETTSCEEEEETTCSS--EEEEEC-CCSSCCCEEEECTTSTTEEEEE
T ss_pred EEEeCCCeEEEccCCCCC--ccEEec-CCcceEEEEEECCCCCCEEEEe
Confidence 8887777 9999976531 122222 2334466788888774 55543
No 176
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=98.55 E-value=0.0002 Score=66.47 Aligned_cols=204 Identities=10% Similarity=0.053 Sum_probs=104.2
Q ss_pred CCcCCCcceEEcCCCc-EEEEecCCeEEEEe--CCeE-EEEEecCCCceeceEEcCCCcEEEEeCCC-ceEEEc-CC---
Q 017520 76 GSVNHPEDASMDKNGV-IYTATRDGWIKRLQ--DGTW-VNWKFIDSQTLVGLTSTKEGHLIICDNAN-GLHKVS-ED--- 146 (370)
Q Consensus 76 ~~~~~P~~i~~d~~G~-l~v~~~~g~I~~~~--~g~~-~~~~~~~~~p~~gl~~d~~G~L~v~~~~~-gi~~~~-~~--- 146 (370)
|.-..-.++++.++|. |..++.+|.|..|+ +++. ..+........ .++++++|++.++.... .+..++ .+
T Consensus 64 gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~-~~~~s~~g~~las~~~d~~v~iw~~~~~~~ 142 (380)
T 3iz6_a 64 GHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVM-ECAFAPNGQSVACGGLDSACSIFNLSSQAD 142 (380)
T ss_dssp CCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCC-CCEECTTSSEEEECCSSSCCEEEECCCCSS
T ss_pred ccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEE-EEEECCCCCEEEEeeCCCcEEEEECCCCcc
Confidence 4333467788888875 66677999999999 5543 33433444566 88898888876654333 333333 11
Q ss_pred --C----eEEEEeec---CCcccc--cccce-EEcCCCcEEEEeCCCCC-----------CCccce----------eccc
Q 017520 147 --G----VENFLSYV---NGSKLR--FANDV-VEASDGSLYFTVSSSKY-----------LPHEYC----------LDIL 193 (370)
Q Consensus 147 --g----~~~~~~~~---~g~~~~--~~~~l-~~d~~G~l~v~d~~~~~-----------~~~~~~----------~~~~ 193 (370)
+ ...+.... ....+. ....+ .-+.||.+.+-|....- +-.... ..+.
T Consensus 143 ~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~ 222 (380)
T 3iz6_a 143 RDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFI 222 (380)
T ss_dssp CCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEE
T ss_pred ccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEE
Confidence 1 00010000 000000 00112 22345555544321100 000000 0011
Q ss_pred ccCCCceEEEEeCCC--CeEEEEecCCCCccceEEccCCCEEEEEeCCc-EEEEEeCCCCCCceeeeccC------CCCC
Q 017520 194 EGKPHGQLLKYDPSS--NITTLVADGFYFANGVALSRDEDYVVVCESWK-CRKYWLKGERKGKLETFAEN------LPGA 264 (370)
Q Consensus 194 ~~~~~g~l~~~d~~t--~~~~~~~~~~~~p~gi~~~~dg~~l~v~~~~~-l~~~~~~~~~~~~~~~~~~~------~~g~ 264 (370)
....++.|..||... .....+.......+.++++|+++.++.+...+ |..||+.... ....+... ....
T Consensus 223 sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~--~~~~~~~~~~~~~~~~~~ 300 (380)
T 3iz6_a 223 SGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGH--QLQVYNREPDRNDNELPI 300 (380)
T ss_dssp EEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTE--EEEEECCCCSSSCCSSCS
T ss_pred EEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCc--EEEEecccccccccccCc
Confidence 223456788888752 22333333334567899999999777766666 8889876531 11122110 1112
Q ss_pred CCceeECCCCCEEEEEec
Q 017520 265 PDNINLAPDGTFWIAIIK 282 (370)
Q Consensus 265 p~~i~~d~~G~lwv~~~~ 282 (370)
...++++++|++.++...
T Consensus 301 v~~~~~s~~g~~l~~g~~ 318 (380)
T 3iz6_a 301 VTSVAFSISGRLLFAGYS 318 (380)
T ss_dssp CSEEEECSSSSEEEEECT
T ss_pred eEEEEECCCCCEEEEEEC
Confidence 456889999987666543
No 177
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=98.54 E-value=6.4e-05 Score=70.74 Aligned_cols=176 Identities=13% Similarity=0.129 Sum_probs=110.1
Q ss_pred CCcceEEcCCCcEE-EEecCCeEEEEe--CCeE-EEEEecCCCceeceEEcCCCcEEEEeCCCc-eEEEc-CCC--eEEE
Q 017520 80 HPEDASMDKNGVIY-TATRDGWIKRLQ--DGTW-VNWKFIDSQTLVGLTSTKEGHLIICDNANG-LHKVS-EDG--VENF 151 (370)
Q Consensus 80 ~P~~i~~d~~G~l~-v~~~~g~I~~~~--~g~~-~~~~~~~~~p~~gl~~d~~G~L~v~~~~~g-i~~~~-~~g--~~~~ 151 (370)
...+++++++|.+. .++.+|.|..|+ +++. ..+........ ++++.++|+.+++....+ |..++ .++ +..+
T Consensus 152 ~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~-~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~ 230 (410)
T 1vyh_C 152 SVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVS-SVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF 230 (410)
T ss_dssp CEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEE-EEEECSSSSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEE-EEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEE
Confidence 34678888888644 566889999998 4443 33333344566 899999998666544444 55566 566 4443
Q ss_pred EeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecC-CCCccceEEccC-
Q 017520 152 LSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG-FYFANGVALSRD- 229 (370)
Q Consensus 152 ~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~-~~~p~gi~~~~d- 229 (370)
... ...+..+.+.++|++.++.+ .++.|..||..+++....... ......++++++
T Consensus 231 ~~h-----~~~v~~~~~~~~g~~l~s~s-----------------~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~ 288 (410)
T 1vyh_C 231 TGH-----REWVRMVRPNQDGTLIASCS-----------------NDQTVRVWVVATKECKAELREHRHVVECISWAPES 288 (410)
T ss_dssp ECC-----SSCEEEEEECTTSSEEEEEE-----------------TTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSC
T ss_pred eCC-----CccEEEEEECCCCCEEEEEc-----------------CCCeEEEEECCCCceeeEecCCCceEEEEEEcCcc
Confidence 221 13567889999998777754 357788889877665443322 234466777775
Q ss_pred -------------------CCEEEEEeCCc-EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCCEEEEEe
Q 017520 230 -------------------EDYVVVCESWK-CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAII 281 (370)
Q Consensus 230 -------------------g~~l~v~~~~~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~ 281 (370)
+..++.+...+ |..||+.... ....+. ...+....++++++|++.++..
T Consensus 289 ~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~--~~~~~~-~h~~~v~~v~~~~~g~~l~s~s 357 (410)
T 1vyh_C 289 SYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGM--CLMTLV-GHDNWVRGVLFHSGGKFILSCA 357 (410)
T ss_dssp GGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTE--EEEEEE-CCSSCEEEEEECSSSSCEEEEE
T ss_pred cccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCc--eEEEEE-CCCCcEEEEEEcCCCCEEEEEe
Confidence 56666666666 8889876431 122222 2333456688899997555543
No 178
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.54 E-value=9.4e-06 Score=75.47 Aligned_cols=240 Identities=7% Similarity=-0.092 Sum_probs=129.2
Q ss_pred CcEEEEec-CC----eEEEEe--CCeEEEEEecCCCceeceEEcCCC-cEEEEeC----------CCceEEEc-CCC--e
Q 017520 90 GVIYTATR-DG----WIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEG-HLIICDN----------ANGLHKVS-EDG--V 148 (370)
Q Consensus 90 G~l~v~~~-~g----~I~~~~--~g~~~~~~~~~~~p~~gl~~d~~G-~L~v~~~----------~~gi~~~~-~~g--~ 148 (370)
..+|+.+. .+ .|..+| ++++..-...+..| ++++++|| .+||++. .+-|..+| .++ .
T Consensus 32 ~~~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv 109 (368)
T 1mda_H 32 RRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPI 109 (368)
T ss_dssp TEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEE
T ss_pred CeEEEECCccCCccceEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEE
Confidence 57888873 33 788999 66665545555666 79999999 5999973 13488888 566 3
Q ss_pred EEEEeecCCcc---cccccceEEcCCC-cEEEEeCC-CC------CCCccceec----------------ccccCCCceE
Q 017520 149 ENFLSYVNGSK---LRFANDVVEASDG-SLYFTVSS-SK------YLPHEYCLD----------------ILEGKPHGQL 201 (370)
Q Consensus 149 ~~~~~~~~g~~---~~~~~~l~~d~~G-~l~v~d~~-~~------~~~~~~~~~----------------~~~~~~~g~l 201 (370)
..+. ...+.+ ...|..+++++|| .+|+++.. .. .+... ... ......++.+
T Consensus 110 ~~I~-v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t-v~~i~v~~~~~~~p~g~~~~~~~~~dg~~ 187 (368)
T 1mda_H 110 ADIE-LPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD-DQLTKSASCFHIHPGAAATHYLGSCPASL 187 (368)
T ss_dssp EEEE-ETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE-EEEEECSSCCCCEEEETTEEECCCCTTSC
T ss_pred EEEE-CCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh-ceEEECCCceEEccCCCeEEEEEcCCCCE
Confidence 3332 110111 2468899999999 69999642 11 12211 000 0112234445
Q ss_pred EEEeCCC-----CeEEEE----ecCCCCccceEEccCCCEEEEEeCCc-EEEEEeCCCCCCceeeeccC------CCCCC
Q 017520 202 LKYDPSS-----NITTLV----ADGFYFANGVALSRDEDYVVVCESWK-CRKYWLKGERKGKLETFAEN------LPGAP 265 (370)
Q Consensus 202 ~~~d~~t-----~~~~~~----~~~~~~p~gi~~~~dg~~l~v~~~~~-l~~~~~~~~~~~~~~~~~~~------~~g~p 265 (370)
..+|.++ +++... ..-...|. + +++++.+|+... + +..+|..+........+.-. ....|
T Consensus 188 ~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~--~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p 263 (368)
T 1mda_H 188 AASDLAAAPAAAGIVGAQCTGAQNCSSQAA--Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRS 263 (368)
T ss_dssp EEEECCSSCCCCEECCCCSCTTSCBCSCCE--E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEE
T ss_pred EEEECccccccCCeEEEEeeeeeeCCCCcc--c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEecccccccccccc
Confidence 5555543 221100 00012233 3 555555666555 6 88898754311111111000 00123
Q ss_pred Cc---eeECCCC-CEEEEEe-c-CchhHHHhhhcchhHHHHHHhCCccccccccCCCceEEEEECC-CCcEEEEEeCCCC
Q 017520 266 DN---INLAPDG-TFWIAII-K-LDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAE-DGTIIRNLVDPTG 338 (370)
Q Consensus 266 ~~---i~~d~~G-~lwv~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~-~g~~~~~~~~~~g 338 (370)
.+ +++++|| ++|++.. . +.. + .. ...+..+|. .++++..+....
T Consensus 264 ~g~~~v~~s~dg~~lyV~~~~~~~~~-~--------------------------~~-~~~~~ViD~~t~~vv~~i~vg~- 314 (368)
T 1mda_H 264 AGFQMVAKLKNTDGIMILTVEHSRSC-L--------------------------AA-AENTSSVTASVGQTSGPISNGH- 314 (368)
T ss_dssp CSSSCEEEETTTTEEEEEEEECSSCT-T--------------------------SC-EEEEEEEESSSCCEEECCEEEE-
T ss_pred CcceeeEEcCCCCEEEEEeccccCcc-c--------------------------cc-CCCEEEEECCCCeEEEEEECCC-
Confidence 44 7888887 5999876 2 100 0 00 023558885 467777665422
Q ss_pred CccccceeEEE-ECC-EEEEEeC-CCCeEEEEeCC
Q 017520 339 QLMSFVTSGLQ-VDN-HLYVISL-TSNFIGKVQLS 370 (370)
Q Consensus 339 ~~~~~~t~~~~-~~g-~L~~gs~-~~~~i~~~~~~ 370 (370)
....+.. .+| ++|+.+. ..+.|.++++.
T Consensus 315 ----~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~ 345 (368)
T 1mda_H 315 ----DSDAIIAAQDGASDNYANSAGTEVLDIYDAA 345 (368)
T ss_dssp ----EECEEEECCSSSCEEEEEETTTTEEEEEESS
T ss_pred ----CcceEEECCCCCEEEEEccCCCCeEEEEECC
Confidence 2333433 344 5999988 68999999863
No 179
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=98.51 E-value=2.3e-05 Score=70.93 Aligned_cols=177 Identities=10% Similarity=0.005 Sum_probs=105.8
Q ss_pred CCcceEEcCCCc-EEEEecCCeEEEEe--CCe----EEEEEecCCCceeceEEcCCCc--EEEEeCCCceEEEcC-CC--
Q 017520 80 HPEDASMDKNGV-IYTATRDGWIKRLQ--DGT----WVNWKFIDSQTLVGLTSTKEGH--LIICDNANGLHKVSE-DG-- 147 (370)
Q Consensus 80 ~P~~i~~d~~G~-l~v~~~~g~I~~~~--~g~----~~~~~~~~~~p~~gl~~d~~G~--L~v~~~~~gi~~~~~-~g-- 147 (370)
...++++.++|. |++++.+|.|..|+ +++ ............ +++++++|+ |+.+...+.|..++. ..
T Consensus 13 ~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~ 91 (342)
T 1yfq_A 13 YISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLL-CCNFIDNTDLQIYVGTVQGEILKVDLIGSPS 91 (342)
T ss_dssp CEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEE-EEEEEESSSEEEEEEETTSCEEEECSSSSSS
T ss_pred cEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceE-EEEECCCCCcEEEEEcCCCeEEEEEeccCCc
Confidence 456788888775 66677899999998 454 444444555667 899999998 444554445666664 44
Q ss_pred eEEEEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCC---------CeEEEEecCC
Q 017520 148 VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSS---------NITTLVADGF 218 (370)
Q Consensus 148 ~~~~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t---------~~~~~~~~~~ 218 (370)
...+... .....+..+++.+ ++.+++.+ .++.|..||..+ ++........
T Consensus 92 ~~~~~~~---~~~~~v~~l~~~~-~~~l~s~~-----------------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 150 (342)
T 1yfq_A 92 FQALTNN---EANLGICRICKYG-DDKLIAAS-----------------WDGLIEVIDPRNYGDGVIAVKNLNSNNTKVK 150 (342)
T ss_dssp EEECBSC---CCCSCEEEEEEET-TTEEEEEE-----------------TTSEEEEECHHHHTTBCEEEEESCSSSSSSC
T ss_pred eEecccc---CCCCceEEEEeCC-CCEEEEEc-----------------CCCeEEEEcccccccccccccCCeeeEEeeC
Confidence 4322110 0123577889988 76666543 346788887653 2211111122
Q ss_pred CCccceEEccCCCEEEEEeCCc-EEEEEeCC-CCCCceeeeccCCCCCCCceeECC-CCCEEEEEe
Q 017520 219 YFANGVALSRDEDYVVVCESWK-CRKYWLKG-ERKGKLETFAENLPGAPDNINLAP-DGTFWIAII 281 (370)
Q Consensus 219 ~~p~gi~~~~dg~~l~v~~~~~-l~~~~~~~-~~~~~~~~~~~~~~g~p~~i~~d~-~G~lwv~~~ 281 (370)
..+..+++++++ ++++...+ |..|++.. .... ..............+++++ +|++.++..
T Consensus 151 ~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~-~~~~~~~~~~~i~~i~~~~~~~~~l~~~~ 213 (342)
T 1yfq_A 151 NKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDN-GTIEESGLKYQIRDVALLPKEQEGYACSS 213 (342)
T ss_dssp CCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCC-CEEEECSCSSCEEEEEECSGGGCEEEEEE
T ss_pred CceEEEEecCCc--EEEEeCCCeEEEEECCcccccc-ceeeecCCCCceeEEEECCCCCCEEEEEe
Confidence 345678888776 77777666 99999875 3221 1111112333456678888 887555543
No 180
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=98.50 E-value=2.6e-05 Score=72.90 Aligned_cols=179 Identities=11% Similarity=-0.019 Sum_probs=111.3
Q ss_pred CCcceEEcC-CCc-EEEEecCCeEEEEe--CCe--------EEEEEecCCCceeceEEcCCC-cEEEE-eCCCceEEEc-
Q 017520 80 HPEDASMDK-NGV-IYTATRDGWIKRLQ--DGT--------WVNWKFIDSQTLVGLTSTKEG-HLIIC-DNANGLHKVS- 144 (370)
Q Consensus 80 ~P~~i~~d~-~G~-l~v~~~~g~I~~~~--~g~--------~~~~~~~~~~p~~gl~~d~~G-~L~v~-~~~~gi~~~~- 144 (370)
...++++.+ ++. |.+++.+|.|..|+ ++. ...+........ ++++.++| +++++ ..++.|..++
T Consensus 83 ~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~-~~~~~p~~~~~l~s~~~dg~i~iwd~ 161 (402)
T 2aq5_A 83 PVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVG-IVAWHPTAQNVLLSAGCDNVILVWDV 161 (402)
T ss_dssp CEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEE-EEEECSSBTTEEEEEETTSCEEEEET
T ss_pred CEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEE-EEEECcCCCCEEEEEcCCCEEEEEEC
Confidence 456788887 665 45666899999999 442 344444555667 89999998 55554 4444566667
Q ss_pred CCC--eEEEEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEe-cCCC--
Q 017520 145 EDG--VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-DGFY-- 219 (370)
Q Consensus 145 ~~g--~~~~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~-~~~~-- 219 (370)
.++ ...+.. .+ ....+..++++++|+.+++.+ .++.|..||..+++..... ....
T Consensus 162 ~~~~~~~~~~~--~~-~~~~v~~~~~~~~~~~l~~~~-----------------~d~~i~iwd~~~~~~~~~~~~~~~~~ 221 (402)
T 2aq5_A 162 GTGAAVLTLGP--DV-HPDTIYSVDWSRDGALICTSC-----------------RDKRVRVIEPRKGTVVAEKDRPHEGT 221 (402)
T ss_dssp TTTEEEEEECT--TT-CCSCEEEEEECTTSSCEEEEE-----------------TTSEEEEEETTTTEEEEEEECSSCSS
T ss_pred CCCCccEEEec--CC-CCCceEEEEECCCCCEEEEEe-----------------cCCcEEEEeCCCCceeeeeccCCCCC
Confidence 566 332210 11 123578899999997665543 3578999999877665443 2322
Q ss_pred CccceEEccCCCEEEEE---eCCc-EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCCEEEEE
Q 017520 220 FANGVALSRDEDYVVVC---ESWK-CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAI 280 (370)
Q Consensus 220 ~p~gi~~~~dg~~l~v~---~~~~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~ 280 (370)
.+..++++++++.++.+ ...+ |..||+....... .............++++++|++.+.+
T Consensus 222 ~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~-~~~~~~~~~~v~~~~~s~~~~~l~~~ 285 (402)
T 2aq5_A 222 RPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPL-SLQELDTSSGVLLPFFDPDTNIVYLC 285 (402)
T ss_dssp SCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCS-EEEECCCCSSCEEEEEETTTTEEEEE
T ss_pred cceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCc-eEEeccCCCceeEEEEcCCCCEEEEE
Confidence 25789999999866665 3445 9999986543211 11111122335667889999865433
No 181
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=98.50 E-value=8.1e-05 Score=68.91 Aligned_cols=182 Identities=10% Similarity=0.013 Sum_probs=107.5
Q ss_pred CCcCCCcceEEcCCCcEEEEecCCeEEEEe--CCe-------EEEEEecCCCceeceEEcCC----C---cEEEE-eCCC
Q 017520 76 GSVNHPEDASMDKNGVIYTATRDGWIKRLQ--DGT-------WVNWKFIDSQTLVGLTSTKE----G---HLIIC-DNAN 138 (370)
Q Consensus 76 ~~~~~P~~i~~d~~G~l~v~~~~g~I~~~~--~g~-------~~~~~~~~~~p~~gl~~d~~----G---~L~v~-~~~~ 138 (370)
+.-....++++++ ..|++++.+|.|..|+ +++ ...+........ ++++.++ | +++++ ...+
T Consensus 14 ~h~~~i~~~~~~~-~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~~g~~~~~l~s~~~dg 91 (397)
T 1sq9_A 14 AHDADIFSVSACN-SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLH-HVDVLQAIERDAFELCLVATTSFSG 91 (397)
T ss_dssp CSSSCEEEEEECS-SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEE-EEEEEEEEETTTEEEEEEEEEETTS
T ss_pred hhhcCeEEEEecC-CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEE-EEEEecccccCCccccEEEEEcCCC
Confidence 3334557788887 6788888999999999 444 455554455566 8999988 8 65554 4444
Q ss_pred ceEEEc-CCC-e--EEEEeecCCcc----cccccceEEc----CCCcE-EEEeCCCCCCCccceecccccCCCceEEEEe
Q 017520 139 GLHKVS-EDG-V--ENFLSYVNGSK----LRFANDVVEA----SDGSL-YFTVSSSKYLPHEYCLDILEGKPHGQLLKYD 205 (370)
Q Consensus 139 gi~~~~-~~g-~--~~~~~~~~g~~----~~~~~~l~~d----~~G~l-~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d 205 (370)
.|..++ .++ . ........+.. ...+..+++. ++|+. +++.+ .++.|..||
T Consensus 92 ~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-----------------~dg~i~iwd 154 (397)
T 1sq9_A 92 DLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATD-----------------VKGTTYIWK 154 (397)
T ss_dssp CEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEE-----------------TTSCEEEEE
T ss_pred CEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEe-----------------CCCcEEEEe
Confidence 466665 333 2 11111112211 2467889999 88976 55533 246677777
Q ss_pred CCC------C-eEE-----EEe-------cCCCCccceEEccCCCEEEEEeCCc-EEEEEeCCCCCCceeeeccC---C-
Q 017520 206 PSS------N-ITT-----LVA-------DGFYFANGVALSRDEDYVVVCESWK-CRKYWLKGERKGKLETFAEN---L- 261 (370)
Q Consensus 206 ~~t------~-~~~-----~~~-------~~~~~p~gi~~~~dg~~l~v~~~~~-l~~~~~~~~~~~~~~~~~~~---~- 261 (370)
..+ + ... .+. ........+++++++ .++++...+ |..|++...+ ....+. . .
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~--~~~~~~-~~~~h~ 230 (397)
T 1sq9_A 155 FHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLR--PLYNFE-SQHSMI 230 (397)
T ss_dssp EESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTE--EEEEEE-CCC---
T ss_pred CCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCc--eeEEEe-cccccc
Confidence 654 2 111 221 123456789999999 777777666 9999976431 122222 2 2
Q ss_pred --CCCCCceeECCCCCEEEEE
Q 017520 262 --PGAPDNINLAPDGTFWIAI 280 (370)
Q Consensus 262 --~g~p~~i~~d~~G~lwv~~ 280 (370)
......++++++|++.++.
T Consensus 231 ~~~~~i~~i~~~~~~~~l~~~ 251 (397)
T 1sq9_A 231 NNSNSIRSVKFSPQGSLLAIA 251 (397)
T ss_dssp CCCCCEEEEEECSSTTEEEEE
T ss_pred ccCCccceEEECCCCCEEEEE
Confidence 3345668889999865554
No 182
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.48 E-value=7.9e-05 Score=70.85 Aligned_cols=150 Identities=10% Similarity=0.048 Sum_probs=96.2
Q ss_pred CCcceEEcCCCcE--EEEecCCeEEEEe-C---Ce-EEEEE--ecCCCceeceEEcCCCc-EEEEeCCCceEEEc-CCC-
Q 017520 80 HPEDASMDKNGVI--YTATRDGWIKRLQ-D---GT-WVNWK--FIDSQTLVGLTSTKEGH-LIICDNANGLHKVS-EDG- 147 (370)
Q Consensus 80 ~P~~i~~d~~G~l--~v~~~~g~I~~~~-~---g~-~~~~~--~~~~~p~~gl~~d~~G~-L~v~~~~~gi~~~~-~~g- 147 (370)
...+++++++|.. .+++.+|.|..|+ . ++ ...+. .....+. +++++++|. |++++....++.++ .++
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~-~~~~sp~~~~l~~~~~~g~v~~~~~~~~~ 182 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPN-AISIAEDDTTVIIADKFGDVYSIDINSIP 182 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEE-EEEECTTSSEEEEEETTSEEEEEETTSCC
T ss_pred ceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCce-EEEEcCCCCEEEEEeCCCcEEEEecCCcc
Confidence 4678899999875 3455789898888 4 33 33332 2345677 999999997 45555445577776 444
Q ss_pred eEE-EEeecCCcccccccceEEcCC---CcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEE-EEe-cCCCCc
Q 017520 148 VEN-FLSYVNGSKLRFANDVVEASD---GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITT-LVA-DGFYFA 221 (370)
Q Consensus 148 ~~~-~~~~~~g~~~~~~~~l~~d~~---G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~-~~~-~~~~~p 221 (370)
... ......+ ....+..++++++ |++.++.+ .++.|..||..+++.. .+. ......
T Consensus 183 ~~~~~~~~~~~-h~~~v~~~~~sp~~~~~~~l~s~~-----------------~d~~i~vwd~~~~~~~~~~~~~h~~~v 244 (450)
T 2vdu_B 183 EEKFTQEPILG-HVSMLTDVHLIKDSDGHQFIITSD-----------------RDEHIKISHYPQCFIVDKWLFGHKHFV 244 (450)
T ss_dssp CSSCCCCCSEE-CSSCEEEEEEEECTTSCEEEEEEE-----------------TTSCEEEEEESCTTCEEEECCCCSSCE
T ss_pred cccccceeeec-ccCceEEEEEcCCCCCCcEEEEEc-----------------CCCcEEEEECCCCceeeeeecCCCCce
Confidence 211 0001111 1135778999999 87666643 3467888887766543 223 223456
Q ss_pred cceEEccCCCEEEEEeCCc-EEEEEeCCC
Q 017520 222 NGVALSRDEDYVVVCESWK-CRKYWLKGE 249 (370)
Q Consensus 222 ~gi~~~~dg~~l~v~~~~~-l~~~~~~~~ 249 (370)
..++++ +++.++.+...+ |..||+...
T Consensus 245 ~~~~~s-d~~~l~s~~~d~~v~vwd~~~~ 272 (450)
T 2vdu_B 245 SSICCG-KDYLLLSAGGDDKIFAWDWKTG 272 (450)
T ss_dssp EEEEEC-STTEEEEEESSSEEEEEETTTC
T ss_pred EEEEEC-CCCEEEEEeCCCeEEEEECCCC
Confidence 789999 999888877777 888987654
No 183
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=98.48 E-value=5.3e-06 Score=76.60 Aligned_cols=148 Identities=6% Similarity=-0.064 Sum_probs=89.1
Q ss_pred CCcceEEcCCCcEEE-EecCCeEEEEe--CCeEEE---EEecCCCceeceEEcCCCcEEEE-eCCCceEEEc-CCCe--E
Q 017520 80 HPEDASMDKNGVIYT-ATRDGWIKRLQ--DGTWVN---WKFIDSQTLVGLTSTKEGHLIIC-DNANGLHKVS-EDGV--E 149 (370)
Q Consensus 80 ~P~~i~~d~~G~l~v-~~~~g~I~~~~--~g~~~~---~~~~~~~p~~gl~~d~~G~L~v~-~~~~gi~~~~-~~g~--~ 149 (370)
...++++.++|.+.+ ++.+|.|..|+ ++..+. +....+... ++++.++|+++++ ..++.|..++ .++. .
T Consensus 13 ~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~-~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~ 91 (377)
T 3dwl_C 13 PSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVT-CVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWK 91 (377)
T ss_dssp CCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEE-EEEECTTTCCEEEEETTSSEEEC------CCC
T ss_pred cEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEE-EEEEeCCCCEEEEEeCCCeEEEEEcCCCCcee
Confidence 467789999887554 44788888888 553222 222344566 8999999975554 4334455555 3331 1
Q ss_pred EEEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCe----EEEEec-CCCCccce
Q 017520 150 NFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNI----TTLVAD-GFYFANGV 224 (370)
Q Consensus 150 ~~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~----~~~~~~-~~~~p~gi 224 (370)
.... ..+ ....+..+++.++|+..++.+ .++.|..||.++++ ...+.. .......+
T Consensus 92 ~~~~-~~~-~~~~v~~~~~~~~~~~l~~~~-----------------~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~ 152 (377)
T 3dwl_C 92 QTLV-LLR-LNRAATFVRWSPNEDKFAVGS-----------------GARVISVCYFEQENDWWVSKHLKRPLRSTILSL 152 (377)
T ss_dssp CEEE-CCC-CSSCEEEEECCTTSSCCEEEE-----------------SSSCEEECCC-----CCCCEEECSSCCSCEEEE
T ss_pred eeeE-ecc-cCCceEEEEECCCCCEEEEEe-----------------cCCeEEEEEECCcccceeeeEeecccCCCeEEE
Confidence 1111 111 123577899999987555532 34678888877654 333333 33456789
Q ss_pred EEccCCCEEEEEeCCc-EEEEEeC
Q 017520 225 ALSRDEDYVVVCESWK-CRKYWLK 247 (370)
Q Consensus 225 ~~~~dg~~l~v~~~~~-l~~~~~~ 247 (370)
+++++++.++.+...+ |..|++.
T Consensus 153 ~~~~~~~~l~~~~~d~~i~iwd~~ 176 (377)
T 3dwl_C 153 DWHPNNVLLAAGCADRKAYVLSAY 176 (377)
T ss_dssp EECTTSSEEEEEESSSCEEEEEEC
T ss_pred EEcCCCCEEEEEeCCCEEEEEEEE
Confidence 9999999888777777 8889875
No 184
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=98.47 E-value=6.6e-05 Score=68.78 Aligned_cols=180 Identities=11% Similarity=0.075 Sum_probs=108.1
Q ss_pred CcceEEcCCCcEE-EEecCCeEEEEe--CCeEE-E-EE--ecCCCceeceEEcCCCcEEEEeCCCc-eEEEc-CCC-eEE
Q 017520 81 PEDASMDKNGVIY-TATRDGWIKRLQ--DGTWV-N-WK--FIDSQTLVGLTSTKEGHLIICDNANG-LHKVS-EDG-VEN 150 (370)
Q Consensus 81 P~~i~~d~~G~l~-v~~~~g~I~~~~--~g~~~-~-~~--~~~~~p~~gl~~d~~G~L~v~~~~~g-i~~~~-~~g-~~~ 150 (370)
...+++.++|.+. .+..+|.|..|+ +++.. . .. ....... +++++++|+++++....+ +..++ ..+ .+.
T Consensus 19 v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~-~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~ 97 (345)
T 3fm0_A 19 CWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVR-KVAWSPCGNYLASASFDATTCIWKKNQDDFEC 97 (345)
T ss_dssp EEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEE-EEEECTTSSEEEEEETTSCEEEEEECCC-EEE
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEE-EEEECCCCCEEEEEECCCcEEEEEccCCCeEE
Confidence 3468899988644 566899999998 45432 1 11 1233456 899999998666544444 44454 333 332
Q ss_pred EEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeE----EEEecCCCCccceEE
Q 017520 151 FLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNIT----TLVADGFYFANGVAL 226 (370)
Q Consensus 151 ~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~----~~~~~~~~~p~gi~~ 226 (370)
+.. ..+. ...++.+++.++|++.++.+ .++.|..+|..++.. ..+.........+++
T Consensus 98 ~~~-~~~h-~~~v~~v~~sp~~~~l~s~s-----------------~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~ 158 (345)
T 3fm0_A 98 VTT-LEGH-ENEVKSVAWAPSGNLLATCS-----------------RDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVW 158 (345)
T ss_dssp EEE-ECCC-SSCEEEEEECTTSSEEEEEE-----------------TTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEE
T ss_pred EEE-ccCC-CCCceEEEEeCCCCEEEEEE-----------------CCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEE
Confidence 221 1221 23678899999998777744 346777777654421 122222334577899
Q ss_pred ccCCCEEEEEeCCc-EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCCEEEEEe
Q 017520 227 SRDEDYVVVCESWK-CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAII 281 (370)
Q Consensus 227 ~~dg~~l~v~~~~~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~ 281 (370)
+++++.+..+...+ |..|+...........+ ....+....++++++|++.++..
T Consensus 159 ~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~-~~h~~~v~~l~~sp~g~~l~s~s 213 (345)
T 3fm0_A 159 HPSQELLASASYDDTVKLYREEEDDWVCCATL-EGHESTVWSLAFDPSGQRLASCS 213 (345)
T ss_dssp CSSSSCEEEEETTSCEEEEEEETTEEEEEEEE-CCCSSCEEEEEECTTSSEEEEEE
T ss_pred CCCCCEEEEEeCCCcEEEEEecCCCEEEEEEe-cCCCCceEEEEECCCCCEEEEEe
Confidence 99999777777777 88888654311111122 12233455688899997655543
No 185
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=98.47 E-value=1.5e-05 Score=75.61 Aligned_cols=182 Identities=10% Similarity=0.032 Sum_probs=107.8
Q ss_pred CCcceEEcC-CC-cEEEEecCCeEEEEe--CCeEEEEE---ecCCCceeceEEcC-CCcEEEEeCCCc-eEEEc-CCC-e
Q 017520 80 HPEDASMDK-NG-VIYTATRDGWIKRLQ--DGTWVNWK---FIDSQTLVGLTSTK-EGHLIICDNANG-LHKVS-EDG-V 148 (370)
Q Consensus 80 ~P~~i~~d~-~G-~l~v~~~~g~I~~~~--~g~~~~~~---~~~~~p~~gl~~d~-~G~L~v~~~~~g-i~~~~-~~g-~ 148 (370)
.-.+|++.+ ++ .|.+|+.+|.|..|+ .++..... ...+... +|++.| +++++++....| |..++ +.+ .
T Consensus 121 ~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~-~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~ 199 (435)
T 4e54_B 121 RATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSIT-GLKFNPLNTNQFYASSMEGTTRLQDFKGNIL 199 (435)
T ss_dssp CEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCC-EEEECSSCTTEEEEECSSSCEEEEETTSCEE
T ss_pred CEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEE-EEEEeCCCCCEEEEEeCCCEEEEeeccCCce
Confidence 356788886 44 466888999999999 44332222 2344567 999996 677666544445 55555 444 4
Q ss_pred EEEEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecCCCCccceEEcc
Q 017520 149 ENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSR 228 (370)
Q Consensus 149 ~~~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~p~gi~~~~ 228 (370)
+.+... . .....+..++++++|.+.++-. .++.|..+|.+++.+..+.......+.+++++
T Consensus 200 ~~~~~~-~-~~~~~~~~~~~~~~~~~l~~g~-----------------~dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p 260 (435)
T 4e54_B 200 RVFASS-D-TINIWFCSLDVSASSRMVVTGD-----------------NVGNVILLNMDGKELWNLRMHKKKVTHVALNP 260 (435)
T ss_dssp EEEECC-S-SCSCCCCCEEEETTTTEEEEEC-----------------SSSBEEEEESSSCBCCCSBCCSSCEEEEEECT
T ss_pred eEEecc-C-CCCccEEEEEECCCCCEEEEEe-----------------CCCcEeeeccCcceeEEEecccceEEeeeecC
Confidence 444322 1 1112456789999998776643 35789999987655443333334457899999
Q ss_pred CCCEEEEE-eCCc-EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCCEEEEEe
Q 017520 229 DEDYVVVC-ESWK-CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAII 281 (370)
Q Consensus 229 dg~~l~v~-~~~~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~ 281 (370)
+++.++++ ...+ |..||+...+.................++++++|++.++..
T Consensus 261 ~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~ 315 (435)
T 4e54_B 261 CCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTD 315 (435)
T ss_dssp TCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEE
T ss_pred CCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEc
Confidence 98755544 4455 88888765321111010111122234567888887555543
No 186
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=98.47 E-value=8.4e-06 Score=87.60 Aligned_cols=180 Identities=11% Similarity=0.073 Sum_probs=117.2
Q ss_pred CCCcceEEcCCCc-EEEEecCCeEEEEe--CCeEEEEEecCCCceeceEEcCCCcEEEEeCCCceEEEc-CCC--eEEEE
Q 017520 79 NHPEDASMDKNGV-IYTATRDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGHLIICDNANGLHKVS-EDG--VENFL 152 (370)
Q Consensus 79 ~~P~~i~~d~~G~-l~v~~~~g~I~~~~--~g~~~~~~~~~~~p~~gl~~d~~G~L~v~~~~~gi~~~~-~~g--~~~~~ 152 (370)
....+++++++|. +.+++.+|.|..|+ +++............ .+++.+++.++.+...+.+..++ .++ ...+.
T Consensus 1004 ~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~v~-~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~ 1082 (1249)
T 3sfz_A 1004 KAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFLQAHQETVK-DFRLLQDSRLLSWSFDGTVKVWNVITGRIERDFT 1082 (1249)
T ss_dssp SCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEECCBCCSSCEE-EEEECSSSEEEEEESSSEEEEEETTTTCCCEEEE
T ss_pred CceEEEEECCCCCEEEEEcCCCEEEEEECCCCceEEEecCCCcEE-EEEEcCCCcEEEEECCCcEEEEECCCCceeEEEc
Confidence 3467789998885 55666899999999 666554444444556 88999988888887666677777 566 44432
Q ss_pred eecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecC-CCCccceEEccCCC
Q 017520 153 SYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG-FYFANGVALSRDED 231 (370)
Q Consensus 153 ~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~-~~~p~gi~~~~dg~ 231 (370)
.. ...+..++++++|+..++.+ .++.|..||..+++......+ ......+++++|++
T Consensus 1083 ~~-----~~~v~~~~~s~d~~~l~s~s-----------------~d~~v~iwd~~~~~~~~~l~~h~~~v~~~~~s~dg~ 1140 (1249)
T 3sfz_A 1083 CH-----QGTVLSCAISSDATKFSSTS-----------------ADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGI 1140 (1249)
T ss_dssp CC-----SSCCCCEEECSSSSSCEEEC-----------------CSSCCCEECSSSSSCSBCCCCCSSCEEEEEECSSSS
T ss_pred cc-----CCcEEEEEECCCCCEEEEEc-----------------CCCcEEEEECCCcceeeeeccCCCcEEEEEECCCCC
Confidence 21 13577899999997666643 346677888765543222222 23356789999999
Q ss_pred EEEEEeCCc-EEEEEeCCCCC-Cceeee-----ccCCCCCCCceeECCCCCEEEEEe
Q 017520 232 YVVVCESWK-CRKYWLKGERK-GKLETF-----AENLPGAPDNINLAPDGTFWIAII 281 (370)
Q Consensus 232 ~l~v~~~~~-l~~~~~~~~~~-~~~~~~-----~~~~~g~p~~i~~d~~G~lwv~~~ 281 (370)
.+..+...+ |..|++.+.+. ...... .....+....++++++|.+.++..
T Consensus 1141 ~lat~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~l~s~~ 1197 (1249)
T 3sfz_A 1141 LLATGDDNGEIRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVSAG 1197 (1249)
T ss_dssp EEEEEETTSCCCEEESSSSCCCCCCCCCC-------CCSCCCEEEECTTSSCEEEES
T ss_pred EEEEEeCCCEEEEEECCCCceEEEeccccccccccccCceEEEEEECCCCCEEEECC
Confidence 888887777 88899865421 111000 012233467789999998666653
No 187
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=98.46 E-value=3.3e-05 Score=70.27 Aligned_cols=177 Identities=8% Similarity=0.003 Sum_probs=106.0
Q ss_pred CCcceEEcCC----CcEEEEecCCeEEEEe--CCe--EEEEEecCCCceece------EEcCCCcEEEE-eCCCceEEEc
Q 017520 80 HPEDASMDKN----GVIYTATRDGWIKRLQ--DGT--WVNWKFIDSQTLVGL------TSTKEGHLIIC-DNANGLHKVS 144 (370)
Q Consensus 80 ~P~~i~~d~~----G~l~v~~~~g~I~~~~--~g~--~~~~~~~~~~p~~gl------~~d~~G~L~v~-~~~~gi~~~~ 144 (370)
...++++.++ ..+++++.+|.|..|+ +++ ...+........ ++ +++++++++++ ...+.|..++
T Consensus 67 ~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd 145 (357)
T 3i2n_A 67 PIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIIN-AIDGIGGLGIGEGAPEIVTGSRDGTVKVWD 145 (357)
T ss_dssp CEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEE-EEEEESGGGCC-CCCEEEEEETTSCEEEEC
T ss_pred cEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceE-EEeeccccccCCCccEEEEEeCCCeEEEEe
Confidence 4566778776 4677788899999999 443 444444444445 66 44678875554 4344566666
Q ss_pred -CCC---eEEEEeecCCcccccccceE----EcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEec
Q 017520 145 -EDG---VENFLSYVNGSKLRFANDVV----EASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD 216 (370)
Q Consensus 145 -~~g---~~~~~~~~~g~~~~~~~~l~----~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~ 216 (370)
.++ ...+. ...+.....+..++ ++++|++.++.. .++.|..||..+++......
T Consensus 146 ~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~-----------------~d~~i~i~d~~~~~~~~~~~ 207 (357)
T 3i2n_A 146 PRQKDDPVANME-PVQGENKRDCWTVAFGNAYNQEERVVCAGY-----------------DNGDIKLFDLRNMALRWETN 207 (357)
T ss_dssp TTSCSSCSEEEC-CCTTSCCCCEEEEEEECCCC-CCCEEEEEE-----------------TTSEEEEEETTTTEEEEEEE
T ss_pred CCCCCCcceecc-ccCCCCCCceEEEEEEeccCCCCCEEEEEc-----------------cCCeEEEEECccCceeeecC
Confidence 443 33332 11222223455666 567887666643 34789999998887655444
Q ss_pred CCCCccceEEcc---CCCEEEEEeCCc-EEEEEeCCCCCC-ceeee-ccCCCCCCCceeECCCCC
Q 017520 217 GFYFANGVALSR---DEDYVVVCESWK-CRKYWLKGERKG-KLETF-AENLPGAPDNINLAPDGT 275 (370)
Q Consensus 217 ~~~~p~gi~~~~---dg~~l~v~~~~~-l~~~~~~~~~~~-~~~~~-~~~~~g~p~~i~~d~~G~ 275 (370)
.......+++++ +++.++++...+ |..|++...+.. ..... ..........+++.++|.
T Consensus 208 ~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 272 (357)
T 3i2n_A 208 IKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNR 272 (357)
T ss_dssp CSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEE
T ss_pred CCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCC
Confidence 445667899999 899888887777 888887643211 11100 012233355677888887
No 188
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=98.46 E-value=1.8e-05 Score=73.07 Aligned_cols=173 Identities=11% Similarity=0.116 Sum_probs=101.9
Q ss_pred CCcceEEcCCCcEEEEecCCeEEEEe--CCeEE---EEE--ecCCCceeceEEcCCCcEEEEeCC-CceEEEc-CCC--e
Q 017520 80 HPEDASMDKNGVIYTATRDGWIKRLQ--DGTWV---NWK--FIDSQTLVGLTSTKEGHLIICDNA-NGLHKVS-EDG--V 148 (370)
Q Consensus 80 ~P~~i~~d~~G~l~v~~~~g~I~~~~--~g~~~---~~~--~~~~~p~~gl~~d~~G~L~v~~~~-~gi~~~~-~~g--~ 148 (370)
+..++++.+++.+.++..+|.|..|+ +++.. .+. ...+... ++++.++|+.+++... +.|..++ .++ .
T Consensus 96 ~V~~~~~s~d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~-~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~ 174 (357)
T 4g56_B 96 GVTDVAWVSEKGILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVK-TLSVFSDGTQAVSGGKDFSVKVWDLSQKAVL 174 (357)
T ss_dssp CEEEEEEETTTEEEEEETTSCEEEC--------CCCCEEECCCSSCEE-EEEECSSSSEEEEEETTSCEEEEETTTTEEE
T ss_pred CEEEEEEcCCCCEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEE-EEEECCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence 34678888999999999999999888 44321 111 2234566 8999999986665444 4466666 556 3
Q ss_pred EEEEeecCCcccccccceEEcCCCc-EEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEec---CCCCccce
Q 017520 149 ENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD---GFYFANGV 224 (370)
Q Consensus 149 ~~~~~~~~g~~~~~~~~l~~d~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~---~~~~p~gi 224 (370)
..+ .+. ...++.+++.+++. ++++.. .++.|..+|..+++...... ....+..+
T Consensus 175 ~~~----~~h-~~~v~~v~~s~~~~~~~~s~~-----------------~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v 232 (357)
T 4g56_B 175 KSY----NAH-SSEVNCVAACPGKDTIFLSCG-----------------EDGRILLWDTRKPKPATRIDFCASDTIPTSV 232 (357)
T ss_dssp EEE----CCC-SSCEEEEEECTTCSSCEEEEE-----------------TTSCEEECCTTSSSCBCBCCCTTCCSCEEEE
T ss_pred EEE----cCC-CCCEEEEEEccCCCceeeeec-----------------cCCceEEEECCCCceeeeeeeccccccccch
Confidence 322 111 23577889988874 555533 34778888887665432221 12235678
Q ss_pred EEccCCCEEE-EEeCCc-EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCCEEE
Q 017520 225 ALSRDEDYVV-VCESWK-CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWI 278 (370)
Q Consensus 225 ~~~~dg~~l~-v~~~~~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv 278 (370)
+++|++..++ .+...+ |..||+...+. ...+. ...+....+++.++|.-++
T Consensus 233 ~~sp~~~~~la~g~~d~~i~~wd~~~~~~--~~~~~-~~~~~v~~l~~sp~~~~~l 285 (357)
T 4g56_B 233 TWHPEKDDTFACGDETGNVSLVNIKNPDS--AQTSA-VHSQNITGLAYSYHSSPFL 285 (357)
T ss_dssp EECTTSTTEEEEEESSSCEEEEESSCGGG--CEEEC-CCSSCEEEEEECSSSSCCE
T ss_pred hhhhcccceEEEeecccceeEEECCCCcE--eEEEe-ccceeEEEEEEcCCCCCEE
Confidence 9999854344 445555 99999765422 22221 2222345678888874333
No 189
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.46 E-value=6e-05 Score=69.71 Aligned_cols=190 Identities=14% Similarity=0.157 Sum_probs=107.2
Q ss_pred eEEcCCCc-EEEEec-CC--eEEEEe--CCeEEEEEecCC-CceeceEEcCCCc-EEEEeCCCceEEEc-CCC-eEEEEe
Q 017520 84 ASMDKNGV-IYTATR-DG--WIKRLQ--DGTWVNWKFIDS-QTLVGLTSTKEGH-LIICDNANGLHKVS-EDG-VENFLS 153 (370)
Q Consensus 84 i~~d~~G~-l~v~~~-~g--~I~~~~--~g~~~~~~~~~~-~p~~gl~~d~~G~-L~v~~~~~gi~~~~-~~g-~~~~~~ 153 (370)
.++.+||+ |++... +| .|+.++ +|+......... ... ++++++||+ |+.+.....++.++ .+| .+.+..
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~-~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~ 119 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTF-GGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQ 119 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSS-SCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCcc-ceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeee
Confidence 46788886 555553 55 499998 566655443332 234 678999996 66666556788898 566 444433
Q ss_pred ecCCcccccccceEEcCCCcEEEEeCC--CCCCC-ccc--eecccccCCCceEEEEeCCCCeEEEEecCCCCccceEEcc
Q 017520 154 YVNGSKLRFANDVVEASDGSLYFTVSS--SKYLP-HEY--CLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSR 228 (370)
Q Consensus 154 ~~~g~~~~~~~~l~~d~~G~l~v~d~~--~~~~~-~~~--~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~p~gi~~~~ 228 (370)
...+ .........+++|+..++... ..+.. ..+ +...........|+++|.++++.+.+.........++++|
T Consensus 120 ~~~~--~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp 197 (388)
T 3pe7_A 120 VPAE--WVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRP 197 (388)
T ss_dssp CCTT--EEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEET
T ss_pred chhh--cccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCCccccccEECC
Confidence 2111 011112345788887664210 00000 000 0011122345789999999888877765555567899999
Q ss_pred -CCCEEEEEeCC-------cEEEEEeCCCCCCceeeeccCCCC-CCCceeECCCCC-EEEE
Q 017520 229 -DEDYVVVCESW-------KCRKYWLKGERKGKLETFAENLPG-APDNINLAPDGT-FWIA 279 (370)
Q Consensus 229 -dg~~l~v~~~~-------~l~~~~~~~~~~~~~~~~~~~~~g-~p~~i~~d~~G~-lwv~ 279 (370)
||+.++++... .|+.++.++.. ...+.....+ .....++++||+ |+..
T Consensus 198 ~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~---~~~l~~~~~~~~~~~~~~spdg~~l~~~ 255 (388)
T 3pe7_A 198 YDDSTVAFCHEGPHDLVDARMWLINEDGTN---MRKVKTHAEGESCTHEFWVPDGSALVYV 255 (388)
T ss_dssp TEEEEEEEEECSCTTTSSCSEEEEETTSCC---CEESCCCCTTEEEEEEEECTTSSCEEEE
T ss_pred CCCCEEEEEEecCCCCCcceEEEEeCCCCc---eEEeeeCCCCcccccceECCCCCEEEEE
Confidence 99877665532 28888876542 2222211111 122457899996 5333
No 190
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.46 E-value=1.3e-05 Score=78.93 Aligned_cols=175 Identities=13% Similarity=0.037 Sum_probs=102.8
Q ss_pred cceEEcCCCcEEEEec---CC--eEEEEe---CCeEEEEEecCCCceeceEEcCCC--cEEEEeCCCceEEEc-CCC-eE
Q 017520 82 EDASMDKNGVIYTATR---DG--WIKRLQ---DGTWVNWKFIDSQTLVGLTSTKEG--HLIICDNANGLHKVS-EDG-VE 149 (370)
Q Consensus 82 ~~i~~d~~G~l~v~~~---~g--~I~~~~---~g~~~~~~~~~~~p~~gl~~d~~G--~L~v~~~~~gi~~~~-~~g-~~ 149 (370)
.++++++|..+|+++. +. .|+.++ +|....+.. ..... ..++.+|| .+|++....++..++ .+| .+
T Consensus 68 ~~~~~spd~~l~~~~~~~g~~~~~l~~~~~~~~g~~~~l~~-~~~~~-~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~ 145 (582)
T 3o4h_A 68 LDPHYGVGRVILVRDVSKGAEQHALFKVNTSRPGEEQRLEA-VKPMR-ILSGVDTGEAVVFTGATEDRVALYALDGGGLR 145 (582)
T ss_dssp CEECTTCSEEEEEEECSTTSCCEEEEEEETTSTTCCEECTT-SCSBE-EEEEEECSSCEEEEEECSSCEEEEEEETTEEE
T ss_pred ccccCCCCeEEEEeccCCCCcceEEEEEeccCCCccccccC-CCCce-eeeeCCCCCeEEEEecCCCCceEEEccCCcEE
Confidence 4456666644555543 22 466565 333332221 11222 34555555 466665556666667 566 55
Q ss_pred EEEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecCCCCccceEEccC
Q 017520 150 NFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRD 229 (370)
Q Consensus 150 ~~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~p~gi~~~~d 229 (370)
.+... . . .+++++|||+..+..+. .......|+++|.++++.+.+.......+.++++||
T Consensus 146 ~l~~~-~-----~-~~~~~spDG~~la~~~~-------------~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpD 205 (582)
T 3o4h_A 146 ELARL-P-----G-FGFVSDIRGDLIAGLGF-------------FGGGRVSLFTSNLSSGGLRVFDSGEGSFSSASISPG 205 (582)
T ss_dssp EEEEE-S-----S-CEEEEEEETTEEEEEEE-------------EETTEEEEEEEETTTCCCEEECCSSCEEEEEEECTT
T ss_pred EeecC-C-----C-ceEEECCCCCEEEEEEE-------------cCCCCeEEEEEcCCCCCceEeecCCCccccceECCC
Confidence 44332 1 1 67899999986554221 001225699999988888776555445678999999
Q ss_pred CCEEEEEeCCc---EEEEEeCCCCCCceeeeccCCCCCCCcee--------ECCCCCEEEEEec
Q 017520 230 EDYVVVCESWK---CRKYWLKGERKGKLETFAENLPGAPDNIN--------LAPDGTFWIAIIK 282 (370)
Q Consensus 230 g~~l~v~~~~~---l~~~~~~~~~~~~~~~~~~~~~g~p~~i~--------~d~~G~lwv~~~~ 282 (370)
|+.++.++..+ |+++|+++.+ .. ........+.+++ +++||.++++...
T Consensus 206 G~~l~~~~~~~~~~i~~~d~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~ 265 (582)
T 3o4h_A 206 MKVTAGLETAREARLVTVDPRDGS---VE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARR 265 (582)
T ss_dssp SCEEEEEECSSCEEEEEECTTTCC---EE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEE
T ss_pred CCEEEEccCCCeeEEEEEcCCCCc---EE-EccCCCcChhhhhhccccceeEcCCCcEEEEEEc
Confidence 99988776655 8888877642 22 2222222234456 8999988777654
No 191
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.46 E-value=3.5e-06 Score=82.18 Aligned_cols=183 Identities=11% Similarity=0.107 Sum_probs=114.1
Q ss_pred CceEecCCCcCCCcceEEcCCC-cEEEEecCC--------------------------------------eEEEEe--C-
Q 017520 69 DFIKVGEGSVNHPEDASMDKNG-VIYTATRDG--------------------------------------WIKRLQ--D- 106 (370)
Q Consensus 69 ~~~~~~~~~~~~P~~i~~d~~G-~l~v~~~~g--------------------------------------~I~~~~--~- 106 (370)
-.+++..+. +|+.++++++| .+|+++.+. .|..+| +
T Consensus 187 v~~qI~Vgg--~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~ 264 (595)
T 1fwx_A 187 VAWQVLVSG--NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKE 264 (595)
T ss_dssp EEEEEEESS--CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGG
T ss_pred EEEEEEeCC--CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCccc
Confidence 345555553 79999999887 566766321 244455 2
Q ss_pred -CeE-EEEEecCCCceeceEEcCCCc-EEEEeCC-CceEEEc-CCC-------e----EEEEeecCCcccccccceEEcC
Q 017520 107 -GTW-VNWKFIDSQTLVGLTSTKEGH-LIICDNA-NGLHKVS-EDG-------V----ENFLSYVNGSKLRFANDVVEAS 170 (370)
Q Consensus 107 -g~~-~~~~~~~~~p~~gl~~d~~G~-L~v~~~~-~gi~~~~-~~g-------~----~~~~~~~~g~~~~~~~~l~~d~ 170 (370)
++. ..+...+..|+ |+.++|||+ +|+++.. ..+..++ .+. + ........| ..|..+++++
T Consensus 265 ~~~~~~~~Ipvg~~Ph-Gv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG---~gP~h~aF~~ 340 (595)
T 1fwx_A 265 ASSLFTRYIPIANNPH-GCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELG---LGPLHTAFDG 340 (595)
T ss_dssp GCCSSEEEEEEESSCC-CEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCC---SCEEEEEECT
T ss_pred CCceeEEEEecCCCce-EEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCC---CCcceEEECC
Confidence 222 33344556799 999999996 7887755 4577777 311 0 122222223 4688999999
Q ss_pred CCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCC----------CeEEEEecCCCCc------cceEEccCCCEEE
Q 017520 171 DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSS----------NITTLVADGFYFA------NGVALSRDEDYVV 234 (370)
Q Consensus 171 ~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t----------~~~~~~~~~~~~p------~gi~~~~dg~~l~ 234 (370)
+|++|++.. -++.|.+||.++ .++..-.+-...| .|+.+++||++||
T Consensus 341 dG~aY~t~~-----------------ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~ 403 (595)
T 1fwx_A 341 RGNAYTSLF-----------------LDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLV 403 (595)
T ss_dssp TSEEEEEET-----------------TTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEE
T ss_pred CCeEEEEEe-----------------cCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEE
Confidence 999999965 345677777654 2222112222333 6788899999999
Q ss_pred EEeCCc---E-----------EEEEeCCCCCCceeeeccCCCCCCCceeECCCCCE
Q 017520 235 VCESWK---C-----------RKYWLKGERKGKLETFAENLPGAPDNINLAPDGTF 276 (370)
Q Consensus 235 v~~~~~---l-----------~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~l 276 (370)
+++... + ..||+++.++....-.. . .+.|.+..+++...|
T Consensus 404 ~~Nk~skdr~~~~gp~~~~~~ql~dis~~~m~lv~d~p-~-~~ePh~~~i~~~~~~ 457 (595)
T 1fwx_A 404 CLSKFSKDRFLNVGPLKPENDQLIDISGDKMVLVHDGP-T-FAEPHDAIAVHPSIL 457 (595)
T ss_dssp EEESCCTTSSCCCCSSCCEEEEEEECSSSSCEEEEEEE-E-SSCCCCEEEECTTTT
T ss_pred EcCCCCccccccCCCCCCCcceEEEcCCCcEEEEEEEc-C-CCCCCceEEccHHHc
Confidence 999755 4 78898776543222211 2 346888888776654
No 192
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=98.46 E-value=0.00016 Score=65.68 Aligned_cols=154 Identities=8% Similarity=0.058 Sum_probs=99.8
Q ss_pred EecCCCcCCCcceEEcCC---C--cEEEEecCCeEEEEe--CCe-EEEEEe-----cCCCceeceEEcCC----CcEEE-
Q 017520 72 KVGEGSVNHPEDASMDKN---G--VIYTATRDGWIKRLQ--DGT-WVNWKF-----IDSQTLVGLTSTKE----GHLII- 133 (370)
Q Consensus 72 ~~~~~~~~~P~~i~~d~~---G--~l~v~~~~g~I~~~~--~g~-~~~~~~-----~~~~p~~gl~~d~~----G~L~v- 133 (370)
.+..+.-....++++.++ + .++++..++.|..|+ +++ ...+.. ...... ++++.++ |.+++
T Consensus 12 ~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~~l~~ 90 (366)
T 3k26_A 12 SLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFY-TCAWTYDSNTSHPLLAV 90 (366)
T ss_dssp EEECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEE-EEEEEECTTTCCEEEEE
T ss_pred EeecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEE-EEEeccCCCCCCCEEEE
Confidence 344444345677888852 3 477777888899998 343 333321 123456 8889887 55544
Q ss_pred EeCCCceEEEc-CCC--eEEEEeecCCcccccccceEEcC-CCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCC
Q 017520 134 CDNANGLHKVS-EDG--VENFLSYVNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSN 209 (370)
Q Consensus 134 ~~~~~gi~~~~-~~g--~~~~~~~~~g~~~~~~~~l~~d~-~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~ 209 (370)
+..++.|..++ .++ ...+... ...+..+++.+ ++++.++.+ .++.|..||..++
T Consensus 91 ~~~dg~i~v~d~~~~~~~~~~~~~-----~~~i~~~~~~~~~~~~l~s~~-----------------~dg~i~iwd~~~~ 148 (366)
T 3k26_A 91 AGSRGIIRIINPITMQCIKHYVGH-----GNAINELKFHPRDPNLLLSVS-----------------KDHALRLWNIQTD 148 (366)
T ss_dssp EETTCEEEEECTTTCCEEEEEESC-----CSCEEEEEECSSCTTEEEEEE-----------------TTSCEEEEETTTT
T ss_pred ecCCCEEEEEEchhceEeeeecCC-----CCcEEEEEECCCCCCEEEEEe-----------------CCCeEEEEEeecC
Confidence 44444566666 555 3333211 13678899999 888666643 3578999999877
Q ss_pred eEEEEe----cCCCCccceEEccCCCEEEEEeCCc-EEEEEeCC
Q 017520 210 ITTLVA----DGFYFANGVALSRDEDYVVVCESWK-CRKYWLKG 248 (370)
Q Consensus 210 ~~~~~~----~~~~~p~gi~~~~dg~~l~v~~~~~-l~~~~~~~ 248 (370)
+..... ........++++++++.++.+...+ |..|++..
T Consensus 149 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 192 (366)
T 3k26_A 149 TLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINS 192 (366)
T ss_dssp EEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCS
T ss_pred eEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCC
Confidence 665544 2234567899999999888887777 99998764
No 193
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=98.45 E-value=7.9e-05 Score=68.16 Aligned_cols=183 Identities=9% Similarity=-0.077 Sum_probs=111.7
Q ss_pred CCCcceEEcCCCc-EEEEecCCeEEEEe--CCeEEEE---EecCCCceeceEEcCCCcEEE-EeCCCceEEEc-CCC--e
Q 017520 79 NHPEDASMDKNGV-IYTATRDGWIKRLQ--DGTWVNW---KFIDSQTLVGLTSTKEGHLII-CDNANGLHKVS-EDG--V 148 (370)
Q Consensus 79 ~~P~~i~~d~~G~-l~v~~~~g~I~~~~--~g~~~~~---~~~~~~p~~gl~~d~~G~L~v-~~~~~gi~~~~-~~g--~ 148 (370)
....++++.++|. +++++.+|.|..|+ +++.... ......+. .++++++|+.++ +...+.+..++ ..+ .
T Consensus 53 ~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~ 131 (372)
T 1k8k_C 53 GQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAAR-CVRWAPNEKKFAVGSGSRVISICYFEQENDW 131 (372)
T ss_dssp SCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEE-EEEECTTSSEEEEEETTSSEEEEEEETTTTE
T ss_pred CcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCcee-EEEECCCCCEEEEEeCCCEEEEEEecCCCcc
Confidence 3457788988876 55566889999998 6653332 22334566 899999997555 44444455555 333 2
Q ss_pred EEEEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCC------------------CCe
Q 017520 149 ENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPS------------------SNI 210 (370)
Q Consensus 149 ~~~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~------------------t~~ 210 (370)
........+ ....+..+++.++|+.+++.+ .++.|..||.. +++
T Consensus 132 ~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~-----------------~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~ 193 (372)
T 1k8k_C 132 WVCKHIKKP-IRSTVLSLDWHPNSVLLAAGS-----------------CDFKCRIFSAYIKEVEERPAPTPWGSKMPFGE 193 (372)
T ss_dssp EEEEEECTT-CCSCEEEEEECTTSSEEEEEE-----------------TTSCEEEEECCCTTTSCCCCCBTTBSCCCTTC
T ss_pred eeeeeeecc-cCCCeeEEEEcCCCCEEEEEc-----------------CCCCEEEEEcccccccccccccccccccchhh
Confidence 222111111 124678899999998666643 34678888842 333
Q ss_pred EEE-EecCCCCccceEEccCCCEEEEEeCCc-EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCCEEEEEecC
Q 017520 211 TTL-VADGFYFANGVALSRDEDYVVVCESWK-CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKL 283 (370)
Q Consensus 211 ~~~-~~~~~~~p~gi~~~~dg~~l~v~~~~~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~ 283 (370)
... +.........++++++++.++.+...+ |..|++...+ ....+. ........++++++|.+.++...+
T Consensus 194 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~--~~~~~~-~~~~~v~~~~~~~~~~~l~~~~d~ 265 (372)
T 1k8k_C 194 LMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKM--AVATLA-SETLPLLAVTFITESSLVAAGHDC 265 (372)
T ss_dssp EEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTT--EEEEEE-CSSCCEEEEEEEETTEEEEEETTS
T ss_pred heEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCc--eeEEEc-cCCCCeEEEEEecCCCEEEEEeCC
Confidence 322 222333467899999999888888777 9999986532 222222 222234567888888766665444
No 194
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=98.45 E-value=3.5e-05 Score=69.59 Aligned_cols=215 Identities=9% Similarity=0.105 Sum_probs=127.3
Q ss_pred cCCCcceEEcCCCcEEEEe--cCCeEEEEe-CCe-EEEEEecCCCceeceEEcCCCcEEEEeCC--------------Cc
Q 017520 78 VNHPEDASMDKNGVIYTAT--RDGWIKRLQ-DGT-WVNWKFIDSQTLVGLTSTKEGHLIICDNA--------------NG 139 (370)
Q Consensus 78 ~~~P~~i~~d~~G~l~v~~--~~g~I~~~~-~g~-~~~~~~~~~~p~~gl~~d~~G~L~v~~~~--------------~g 139 (370)
+.+-.-++. .++.||+.. .+++|++++ +|. .+.+... .+. -|..+ ++.||.+... ..
T Consensus 15 i~n~g~~~~-~g~~iy~~n~~d~~~ly~~~~dg~~~~~l~~~--~~~-~i~~~-g~~Iyy~~~~~~~~~~~~~~~~n~~~ 89 (302)
T 3s25_A 15 LYNAGLFCE-SDGEVFFSNTNDNGRLYAMNIDGSNIHKLSND--TAM-YINAD-KNYVYYVRNNNQKITSQTFFSYDRNS 89 (302)
T ss_dssp GGGTTCEEE-ETTEEEEEEGGGTTEEEEEETTSCSCEEEEEE--EEE-EEEEC-SSEEEEEEECC------CCSSCCSEE
T ss_pred eecceEEEE-eCCEEEEEeCCCCceEEEEcCCCCCCEEccCC--cee-eEEEc-CCEEEEEECCCCcccccceeccCCCe
Confidence 333333454 467899987 368899999 664 4444332 233 45554 3467776532 35
Q ss_pred eEEEcCCC--eEEEEeecCCcccccccceEEcCC-CcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEec
Q 017520 140 LHKVSEDG--VENFLSYVNGSKLRFANDVVEASD-GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD 216 (370)
Q Consensus 140 i~~~~~~g--~~~~~~~~~g~~~~~~~~l~~d~~-G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~ 216 (370)
|++++.+| .+.+... . ..++.++ +.||+++.+ ......|++++.++...+.+..
T Consensus 90 Iy~i~~dg~~~~~l~~~-~--------~~~~s~~g~~Iy~~~~~--------------~~~~~~Iy~~~~dGs~~~~lt~ 146 (302)
T 3s25_A 90 LCRIKRNGHGSTVLDPD-P--------CIYASLIGNYIYYLHYD--------------TQTATSLYRIRIDGEEKKKIKN 146 (302)
T ss_dssp EEEEETTSCCCEEEECS-C--------EEEEEEETTEEEEEEES--------------SSSCEEEEEEETTSCCCEEEES
T ss_pred EEEEeCCCCcceEeecC-C--------ccEEEEeCCEEEEEeec--------------CCCCceEEEEECCCCCeEEEeC
Confidence 88888655 4444321 1 1133444 479999711 0145689999998776666655
Q ss_pred CCCCccceEEccCCCEEEEEeCCc--EEEEEeCCCCCCceeeeccCCCCCCCceeECCCC-CEEEEEecCchhHHHhhhc
Q 017520 217 GFYFANGVALSRDEDYVVVCESWK--CRKYWLKGERKGKLETFAENLPGAPDNINLAPDG-TFWIAIIKLDARRMKILNS 293 (370)
Q Consensus 217 ~~~~p~gi~~~~dg~~l~v~~~~~--l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G-~lwv~~~~~~~~~~~~~~~ 293 (370)
... .+++++++.||+++.+. |++.++++. ..+.+... +....++++| .||.+.....
T Consensus 147 ~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~---~~~~l~~~----~~~~~~~P~g~~iy~t~~~~~--------- 206 (302)
T 3s25_A 147 HYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQ---SEALFYDC----NCYKPVVLDDTNVYYMDVNRD--------- 206 (302)
T ss_dssp SCC----CCSEEETTEEEEECTTTCCEEEEETTTT---EEEEEECS----CEEEEEEEETTEEEEEEGGGT---------
T ss_pred CCc----eEeeEECCEEEEEeCCCceEEEEECCCC---CEEEEeCC----CccceeeecCCEEEEEEcCCC---------
Confidence 422 45688999999999854 999998774 23333321 2234455444 5666654421
Q ss_pred chhHHHHHHhCCccccccccCCCceEEEEECCCCcEEEEEeCCCCCccccceeEEEECCEEEEEe-CCCCeEEEEeCC
Q 017520 294 SKLIKHVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVIS-LTSNFIGKVQLS 370 (370)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~~g~L~~gs-~~~~~i~~~~~~ 370 (370)
..|.+.+.+|.....+.+.. ...+...++.||..+ -..+.|.++++|
T Consensus 207 ------------------------~~I~~~~ldG~~~~~Lt~~~------~~~~~~~g~~Iy~~~~~~~~~i~~~~~D 254 (302)
T 3s25_A 207 ------------------------NAIVHVNINNPNPVVLTEAN------IEHYNVYGSLIFYQRGGDNPALCVVKND 254 (302)
T ss_dssp ------------------------TEEEEECSSSCCCEECSCSC------EEEEEEETTEEEEEECSSSCEEEEEETT
T ss_pred ------------------------cEEEEEECCCCCeEEEeCCC------cceEEECCCEEEEEECCCCcEEEEEECC
Confidence 24788888887766664321 122444567777763 345677777765
No 195
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=98.44 E-value=1.5e-06 Score=73.65 Aligned_cols=112 Identities=14% Similarity=0.010 Sum_probs=74.7
Q ss_pred ccccCceEecCCCcCCCcceEEcCCCcEEEEecCCeEEEEe--CC-------eEEEEEecCCCceeceEEcCCCcEEEEe
Q 017520 65 TQLQDFIKVGEGSVNHPEDASMDKNGVIYTATRDGWIKRLQ--DG-------TWVNWKFIDSQTLVGLTSTKEGHLIICD 135 (370)
Q Consensus 65 ~~l~~~~~~~~~~~~~P~~i~~d~~G~l~v~~~~g~I~~~~--~g-------~~~~~~~~~~~p~~gl~~d~~G~L~v~~ 135 (370)
..+..+.++..+.+.+..+++++++|.||.. .+|.+++++ ++ ..+.+-...-.-...+.+|++|.||+..
T Consensus 27 ~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav~ 105 (236)
T 1tl2_A 27 NWLARATLIGKGGWSNFKFLFLSPGGELYGV-LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAVS 105 (236)
T ss_dssp CHHHHSEEEESSSCTTCSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEEE
T ss_pred chhhhccccCccccccceeEEECCCccEEEE-eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEeC
Confidence 4555677788766889999999999999998 789999998 32 1122211110012268999999999994
Q ss_pred CCCceEEEc-C-CC-eEEEEe--ecCCcccccccceEEcCCCcEEEEe
Q 017520 136 NANGLHKVS-E-DG-VENFLS--YVNGSKLRFANDVVEASDGSLYFTV 178 (370)
Q Consensus 136 ~~~gi~~~~-~-~g-~~~~~~--~~~g~~~~~~~~l~~d~~G~l~v~d 178 (370)
+..|++++ + ++ -..+.. ............|.++|+|.||..+
T Consensus 106 -dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~ 152 (236)
T 1tl2_A 106 -KDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH 152 (236)
T ss_dssp -TTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE
T ss_pred -CCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe
Confidence 56799999 3 33 221111 1111122355789999999999886
No 196
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.43 E-value=0.00017 Score=67.20 Aligned_cols=135 Identities=5% Similarity=-0.134 Sum_probs=81.4
Q ss_pred cEEEEec--CC---eEEEEe--CCeEEEEEecCCCceeceEEcCCCc-EEEEeC----------CCceEEEc-CCC--eE
Q 017520 91 VIYTATR--DG---WIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGH-LIICDN----------ANGLHKVS-EDG--VE 149 (370)
Q Consensus 91 ~l~v~~~--~g---~I~~~~--~g~~~~~~~~~~~p~~gl~~d~~G~-L~v~~~----------~~gi~~~~-~~g--~~ 149 (370)
.+|+.+. .+ .|+.+| ++++......+.. . ++++++||+ ||+++. .+.|..+| .++ ..
T Consensus 34 ~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~-p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~ 111 (373)
T 2mad_H 34 RSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFL-P-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIA 111 (373)
T ss_pred EEEEeCCcccCCccEEEEEECCCCeEEEEecCCCC-C-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEE
Confidence 5777763 22 788888 6665433333333 4 899999995 999873 13477888 444 22
Q ss_pred EEEeecCCcc--cccccceEEcCCC-cEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecCCCCccceEE
Q 017520 150 NFLSYVNGSK--LRFANDVVEASDG-SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVAL 226 (370)
Q Consensus 150 ~~~~~~~g~~--~~~~~~l~~d~~G-~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~p~gi~~ 226 (370)
.+........ ...|..++++||| .||+++.. ..+.|..+| ++++.... -+..+.++.+
T Consensus 112 ~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~----------------~~~~v~viD-~t~~~~~~--~i~~~~~~~~ 172 (373)
T 2mad_H 112 DIELPDAPRFDVGPYSWMNANTPNNADLLFFQFA----------------AGPAVGLVV-QGGSSDDQ--LLSSPTCYHI 172 (373)
T ss_pred EEECCCccccccCCCccceEECCCCCEEEEEecC----------------CCCeEEEEE-CCCCEEeE--EcCCCceEEE
Confidence 2211000100 1467899999999 58988642 246799999 88866432 0233444566
Q ss_pred ccCCCEEEEEeCCc--EEEEEe
Q 017520 227 SRDEDYVVVCESWK--CRKYWL 246 (370)
Q Consensus 227 ~~dg~~l~v~~~~~--l~~~~~ 246 (370)
.++++..|++.... +..++.
T Consensus 173 ~~~~~~~~~~~~~dg~~~~vd~ 194 (373)
T 2mad_H 173 HPGAPSTFYLLCAQGGLAKTDH 194 (373)
T ss_pred EeCCCceEEEEcCCCCEEEEEC
Confidence 66665566655543 666766
No 197
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.42 E-value=8.2e-05 Score=74.90 Aligned_cols=161 Identities=12% Similarity=0.157 Sum_probs=93.7
Q ss_pred CeEEEEe--CCeEEEEEec---CCCceeceEEcCCCc-EEEEeCCC-----ceEEEc-CCC--eEEEEeecCCccccccc
Q 017520 99 GWIKRLQ--DGTWVNWKFI---DSQTLVGLTSTKEGH-LIICDNAN-----GLHKVS-EDG--VENFLSYVNGSKLRFAN 164 (370)
Q Consensus 99 g~I~~~~--~g~~~~~~~~---~~~p~~gl~~d~~G~-L~v~~~~~-----gi~~~~-~~g--~~~~~~~~~g~~~~~~~ 164 (370)
..|+.++ +++....... ...+. .+++++||+ |+++.... .|+.++ .+| .+.+...........++
T Consensus 235 ~~l~~~d~~~~~~~~~~~~~~~~~~~~-~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~ 313 (706)
T 2z3z_A 235 VTVGIYHLATGKTVYLQTGEPKEKFLT-NLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLH 313 (706)
T ss_dssp EEEEEEETTTTEEEECCCCSCTTCEEE-EEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCS
T ss_pred eEEEEEECCCCceEeeccCCCCceeEe-eEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccC
Confidence 5688888 5554443321 12345 789999997 66654332 577777 555 33333221111111246
Q ss_pred ceEEcC--CCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecCCCCccc-eEEccCCCEEEEEeCC--
Q 017520 165 DVVEAS--DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANG-VALSRDEDYVVVCESW-- 239 (370)
Q Consensus 165 ~l~~d~--~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~p~g-i~~~~dg~~l~v~~~~-- 239 (370)
.+++++ ||+++++... .....|+.++.+++..+.+..+...... +++++||+.++++...
T Consensus 314 ~~~~sp~~dg~~l~~~~~---------------~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~ 378 (706)
T 2z3z_A 314 PLTFLPGSNNQFIWQSRR---------------DGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEAS 378 (706)
T ss_dssp CCEECTTCSSEEEEEECT---------------TSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSC
T ss_pred CceeecCCCCEEEEEEcc---------------CCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCC
Confidence 789999 9975554321 1345799999766666655443322334 7899999988887653
Q ss_pred ---c-EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCCEEEEE
Q 017520 240 ---K-CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAI 280 (370)
Q Consensus 240 ---~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~ 280 (370)
. |++++.++.+ .+.+. .......+++++||+.++..
T Consensus 379 ~~~~~l~~~d~~~~~---~~~l~--~~~~~~~~~~spdg~~l~~~ 418 (706)
T 2z3z_A 379 PLERHFYCIDIKGGK---TKDLT--PESGMHRTQLSPDGSAIIDI 418 (706)
T ss_dssp TTCBEEEEEETTCCC---CEESC--CSSSEEEEEECTTSSEEEEE
T ss_pred CceEEEEEEEcCCCC---ceecc--CCCceEEEEECCCCCEEEEE
Confidence 2 7888866532 22222 12224457788899766554
No 198
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=98.42 E-value=0.00033 Score=70.48 Aligned_cols=181 Identities=13% Similarity=0.105 Sum_probs=113.9
Q ss_pred CCcceEEcCCCcE-EEEecCCeEEEEe--CCe-EEEEEecCCCceeceEEcCCCcEEEEeCCCc-eEEEcCCC--eEEEE
Q 017520 80 HPEDASMDKNGVI-YTATRDGWIKRLQ--DGT-WVNWKFIDSQTLVGLTSTKEGHLIICDNANG-LHKVSEDG--VENFL 152 (370)
Q Consensus 80 ~P~~i~~d~~G~l-~v~~~~g~I~~~~--~g~-~~~~~~~~~~p~~gl~~d~~G~L~v~~~~~g-i~~~~~~g--~~~~~ 152 (370)
...++++.++|.+ ..++.+|.|..|+ +++ ...+........ +++++++|+.+++....+ |..++..+ ...+.
T Consensus 432 ~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~-~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~ 510 (694)
T 3dm0_A 432 FVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVL-SVAFSLDNRQIVSASRDRTIKLWNTLGECKYTIS 510 (694)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEE-EEEECTTSSCEEEEETTSCEEEECTTSCEEEEEC
T ss_pred cEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEE-EEEEeCCCCEEEEEeCCCEEEEEECCCCcceeec
Confidence 4567888888864 4566899999999 554 344444555677 999999997555444444 55555333 22222
Q ss_pred eecCCcccccccceEEcCCC--cEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecC-CCCccceEEccC
Q 017520 153 SYVNGSKLRFANDVVEASDG--SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG-FYFANGVALSRD 229 (370)
Q Consensus 153 ~~~~g~~~~~~~~l~~d~~G--~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~-~~~p~gi~~~~d 229 (370)
....+ ....+..+++.+++ .+.++.+ .++.|..+|..+++......+ ......++++++
T Consensus 511 ~~~~~-h~~~v~~~~~~~~~~~~~l~s~s-----------------~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spd 572 (694)
T 3dm0_A 511 EGGEG-HRDWVSCVRFSPNTLQPTIVSAS-----------------WDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPD 572 (694)
T ss_dssp SSTTS-CSSCEEEEEECSCSSSCEEEEEE-----------------TTSCEEEEETTTCCEEEEECCCSSCEEEEEECTT
T ss_pred cCCCC-CCCcEEEEEEeCCCCcceEEEEe-----------------CCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCC
Confidence 11111 12357788998876 3444432 357889999887766544433 334678999999
Q ss_pred CCEEEEEeCCc-EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCCEEEEEecC
Q 017520 230 EDYVVVCESWK-CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKL 283 (370)
Q Consensus 230 g~~l~v~~~~~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~ 283 (370)
++.+..+...+ |..||+...+ ....+ ........+++++++.+.++....
T Consensus 573 g~~l~sg~~Dg~i~iwd~~~~~--~~~~~--~~~~~v~~~~~sp~~~~l~~~~~~ 623 (694)
T 3dm0_A 573 GSLCASGGKDGVVLLWDLAEGK--KLYSL--EANSVIHALCFSPNRYWLCAATEH 623 (694)
T ss_dssp SSEEEEEETTSBCEEEETTTTE--EEECC--BCSSCEEEEEECSSSSEEEEEETT
T ss_pred CCEEEEEeCCCeEEEEECCCCc--eEEEe--cCCCcEEEEEEcCCCcEEEEEcCC
Confidence 99777777777 8889876431 11111 122235568889998877665543
No 199
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=98.41 E-value=8.6e-05 Score=68.63 Aligned_cols=147 Identities=11% Similarity=0.012 Sum_probs=97.5
Q ss_pred CCcceEEcC-CC-cEEEEecCCeEEEEe-CC-eEEEEEecC---CCceeceEEcCCCcEEEEeCC-CceEEEcCCC--eE
Q 017520 80 HPEDASMDK-NG-VIYTATRDGWIKRLQ-DG-TWVNWKFID---SQTLVGLTSTKEGHLIICDNA-NGLHKVSEDG--VE 149 (370)
Q Consensus 80 ~P~~i~~d~-~G-~l~v~~~~g~I~~~~-~g-~~~~~~~~~---~~p~~gl~~d~~G~L~v~~~~-~gi~~~~~~g--~~ 149 (370)
...++++.+ ++ .+++++.+|.|..++ .+ ....+.... .... ++++.++++++++... +.|..++.++ ..
T Consensus 120 ~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 198 (383)
T 3ei3_B 120 AITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVIQVFAKTDSWDYWYC-CVDVSVSRQMLATGDSTGRLLLLGLDGHEIF 198 (383)
T ss_dssp BEEEEEEETTEEEEEEEEETTTEEEEEETTSCEEEEEECCCCSSCCEE-EEEEETTTTEEEEEETTSEEEEEETTSCEEE
T ss_pred ceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCceEEEeccCCCCCCeE-EEEECCCCCEEEEECCCCCEEEEECCCCEEE
Confidence 456788877 44 556677899999999 44 444443332 3456 8999999986554434 4455666444 44
Q ss_pred EEEeecCCcccccccceEEcCCCc-EEEEeCCCCCCCccceecccccCCCceEEEEeCCC----CeEEEEecCCCCccce
Q 017520 150 NFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSS----NITTLVADGFYFANGV 224 (370)
Q Consensus 150 ~~~~~~~g~~~~~~~~l~~d~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t----~~~~~~~~~~~~p~gi 224 (370)
.+... ...+..+++.++|. ++++.+ .++.|..||..+ +..............+
T Consensus 199 ~~~~h-----~~~v~~~~~~~~~~~~l~s~~-----------------~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~ 256 (383)
T 3ei3_B 199 KEKLH-----KAKVTHAEFNPRCDWLMATSS-----------------VDATVKLWDLRNIKDKNSYIAEMPHEKPVNAA 256 (383)
T ss_dssp EEECS-----SSCEEEEEECSSCTTEEEEEE-----------------TTSEEEEEEGGGCCSTTCEEEEEECSSCEEEE
T ss_pred EeccC-----CCcEEEEEECCCCCCEEEEEe-----------------CCCEEEEEeCCCCCcccceEEEecCCCceEEE
Confidence 33211 13678899999997 666643 357788888765 3343333344556789
Q ss_pred EEcc-CCCEEEEEeCCc-EEEEEeCCC
Q 017520 225 ALSR-DEDYVVVCESWK-CRKYWLKGE 249 (370)
Q Consensus 225 ~~~~-dg~~l~v~~~~~-l~~~~~~~~ 249 (370)
++++ +++.++.+...+ |..|++...
T Consensus 257 ~~s~~~~~~l~~~~~d~~i~iwd~~~~ 283 (383)
T 3ei3_B 257 YFNPTDSTKLLTTDQRNEIRVYSSYDW 283 (383)
T ss_dssp EECTTTSCEEEEEESSSEEEEEETTBT
T ss_pred EEcCCCCCEEEEEcCCCcEEEEECCCC
Confidence 9999 999888887777 999998654
No 200
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.40 E-value=0.00027 Score=67.11 Aligned_cols=171 Identities=12% Similarity=0.052 Sum_probs=100.1
Q ss_pred ceEEcCCCcEEEEecCCeEEEEe--CCeEE-EEEecCCCceeceEEcCCCcEEEEeCCCceEEEc-CCC--eEEEEeecC
Q 017520 83 DASMDKNGVIYTATRDGWIKRLQ--DGTWV-NWKFIDSQTLVGLTSTKEGHLIICDNANGLHKVS-EDG--VENFLSYVN 156 (370)
Q Consensus 83 ~i~~d~~G~l~v~~~~g~I~~~~--~g~~~-~~~~~~~~p~~gl~~d~~G~L~v~~~~~gi~~~~-~~g--~~~~~~~~~ 156 (370)
++.++ ++.+.+++.+|.|..|+ +++.. .+....+... .+++.+++.|..+..++.|..++ .++ ...+.
T Consensus 127 ~~~~~-~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~-~l~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~---- 200 (464)
T 3v7d_B 127 CLQFE-DNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVW-ALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFE---- 200 (464)
T ss_dssp EEEEE-TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEE-EEEECSTTEEEEEETTSCEEEEETTTTEEEEEEC----
T ss_pred EEEEC-CCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEE-EEEEcCCCEEEEEeCCCCEEEEECCCCcEEEEEC----
Confidence 45554 45777888999999999 56543 3333455566 89998888666666555567777 566 33321
Q ss_pred CcccccccceEEc--CCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEE---------------------
Q 017520 157 GSKLRFANDVVEA--SDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTL--------------------- 213 (370)
Q Consensus 157 g~~~~~~~~l~~d--~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~--------------------- 213 (370)
+. ...+..+++. +++...++.+ .++.|..+|..++....
T Consensus 201 ~h-~~~v~~l~~~~~~~~~~l~s~s-----------------~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (464)
T 3v7d_B 201 GH-NSTVRCLDIVEYKNIKYIVTGS-----------------RDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYF 262 (464)
T ss_dssp CC-SSCEEEEEEEESSSCEEEEEEE-----------------TTSCEEEEECCCCCCC------CCSSEEESCGGGCTTE
T ss_pred CC-CCccEEEEEecCCCCCEEEEEc-----------------CCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEE
Confidence 11 1345666666 4666555533 34667777765443211
Q ss_pred --EecCCCCccceEEccCCCEEEEEeCCc-EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCCEEEEEe
Q 017520 214 --VADGFYFANGVALSRDEDYVVVCESWK-CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAII 281 (370)
Q Consensus 214 --~~~~~~~p~gi~~~~dg~~l~v~~~~~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~ 281 (370)
...+ ....-.+++++++.++.+...+ |..||+...+ ....+. ........++++++|++.++..
T Consensus 263 ~~~~~~-~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~--~~~~~~-~~~~~v~~~~~~~~~~~l~sg~ 329 (464)
T 3v7d_B 263 VGVLRG-HMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMK--CLYILS-GHTDRIYSTIYDHERKRCISAS 329 (464)
T ss_dssp EEEECC-CSSCEEEEEEETTEEEEEETTSCEEEEETTTTE--EEEEEC-CCSSCEEEEEEETTTTEEEEEE
T ss_pred EEEccC-ccceEEEEcCCCCEEEEEeCCCeEEEEECCCCc--EEEEec-CCCCCEEEEEEcCCCCEEEEEe
Confidence 0111 1122345678888888888777 9999976431 122221 2223345678888887555543
No 201
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.40 E-value=0.00016 Score=67.60 Aligned_cols=178 Identities=12% Similarity=0.014 Sum_probs=111.9
Q ss_pred CcceEEcCCCcEEEEecCCeEEEEe-C--Ce-EEEEEecCCCceeceEEcCCCcEEEEeCC-CceEEEc-CCC--eEEEE
Q 017520 81 PEDASMDKNGVIYTATRDGWIKRLQ-D--GT-WVNWKFIDSQTLVGLTSTKEGHLIICDNA-NGLHKVS-EDG--VENFL 152 (370)
Q Consensus 81 P~~i~~d~~G~l~v~~~~g~I~~~~-~--g~-~~~~~~~~~~p~~gl~~d~~G~L~v~~~~-~gi~~~~-~~g--~~~~~ 152 (370)
..++.+++ ..+++++.+|.|..++ . +. ...+....+... +++++++|.++++... +.|..++ .++ ...+.
T Consensus 179 v~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~ 256 (401)
T 4aez_A 179 VGCLSWNR-HVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVC-GLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKT 256 (401)
T ss_dssp EEEEEEET-TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEE-EEEECTTSSEEEEEETTSCEEEEETTCSSEEEEEC
T ss_pred eEEEEECC-CEEEEEcCCCCEEEEecccCcceeeEEcCCCCCee-EEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEec
Confidence 34455542 3566777888898888 3 22 344444555667 9999999976554434 4566666 555 33221
Q ss_pred eecCCcccccccceEEcCCC-cEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecCCCCccceEEccCCC
Q 017520 153 SYVNGSKLRFANDVVEASDG-SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDED 231 (370)
Q Consensus 153 ~~~~g~~~~~~~~l~~d~~G-~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~p~gi~~~~dg~ 231 (370)
.. ...+..+++.++| .++++.++ ..++.|..||..+++.............++++++++
T Consensus 257 ~~-----~~~v~~~~~~p~~~~ll~~~~g---------------s~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~ 316 (401)
T 4aez_A 257 NH-----NAAVKAVAWCPWQSNLLATGGG---------------TMDKQIHFWNAATGARVNTVDAGSQVTSLIWSPHSK 316 (401)
T ss_dssp CC-----SSCCCEEEECTTSTTEEEEECC---------------TTTCEEEEEETTTCCEEEEEECSSCEEEEEECSSSS
T ss_pred CC-----cceEEEEEECCCCCCEEEEecC---------------CCCCEEEEEECCCCCEEEEEeCCCcEEEEEECCCCC
Confidence 11 2357889999977 56665431 135789999988776655444445678899999999
Q ss_pred EEEEEe--CCc-EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCCEEEEEe
Q 017520 232 YVVVCE--SWK-CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAII 281 (370)
Q Consensus 232 ~l~v~~--~~~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~ 281 (370)
.++++. ..+ |..|++..........+ ....+....++++++|.+.++..
T Consensus 317 ~l~~~~g~~dg~i~v~~~~~~~~~~~~~~-~~h~~~v~~~~~s~dg~~l~s~~ 368 (401)
T 4aez_A 317 EIMSTHGFPDNNLSIWSYSSSGLTKQVDI-PAHDTRVLYSALSPDGRILSTAA 368 (401)
T ss_dssp EEEEEECTTTCEEEEEEEETTEEEEEEEE-ECCSSCCCEEEECTTSSEEEEEC
T ss_pred eEEEEeecCCCcEEEEecCCccceeEEEe-cCCCCCEEEEEECCCCCEEEEEe
Confidence 877764 445 88888765322111112 12334466788999998666543
No 202
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=98.39 E-value=0.0012 Score=60.55 Aligned_cols=180 Identities=12% Similarity=0.065 Sum_probs=111.3
Q ss_pred CCcCCCcceEEcCCCc-EEEEecCCeEEEEe--CCeE-EEEEecCCCceeceEEcCCCcEEEEeCCCceEE-Ec-CC---
Q 017520 76 GSVNHPEDASMDKNGV-IYTATRDGWIKRLQ--DGTW-VNWKFIDSQTLVGLTSTKEGHLIICDNANGLHK-VS-ED--- 146 (370)
Q Consensus 76 ~~~~~P~~i~~d~~G~-l~v~~~~g~I~~~~--~g~~-~~~~~~~~~p~~gl~~d~~G~L~v~~~~~gi~~-~~-~~--- 146 (370)
|.-....++++.++|. |..++.||.|..|+ +++. ..+........ .+++.++|.++++....+..+ ++ ..
T Consensus 62 gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~-~~~~sp~g~~lasg~~d~~i~v~~~~~~~~ 140 (354)
T 2pbi_B 62 GHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVM-ACAYAPSGCAIACGGLDNKCSVYPLTFDKN 140 (354)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCC-EEEECTTSSEEEEESTTSEEEEEECCCCTT
T ss_pred CCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEE-EEEECCCCCEEEEeeCCCCEEEEEEecccc
Confidence 4334567888988885 55666999999999 4543 33334445566 899999998777665544333 33 11
Q ss_pred -C----eEEEEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecC-CCC
Q 017520 147 -G----VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG-FYF 220 (370)
Q Consensus 147 -g----~~~~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~-~~~ 220 (370)
+ ...+.. ....+..+++.+++...++.+ .++.|..||.++++......+ ...
T Consensus 141 ~~~~~~~~~~~~-----h~~~v~~~~~~~~~~~l~t~s-----------------~D~~v~lwd~~~~~~~~~~~~h~~~ 198 (354)
T 2pbi_B 141 ENMAAKKKSVAM-----HTNYLSACSFTNSDMQILTAS-----------------GDGTCALWDVESGQLLQSFHGHGAD 198 (354)
T ss_dssp CCSGGGCEEEEE-----CSSCEEEEEECSSSSEEEEEE-----------------TTSEEEEEETTTCCEEEEEECCSSC
T ss_pred ccccccceeeec-----cCCcEEEEEEeCCCCEEEEEe-----------------CCCcEEEEeCCCCeEEEEEcCCCCC
Confidence 1 111111 113567889999987666543 457899999887765443332 233
Q ss_pred ccceEEcc--CCCEEEEEeCCc-EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCCEEEEEe
Q 017520 221 ANGVALSR--DEDYVVVCESWK-CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAII 281 (370)
Q Consensus 221 p~gi~~~~--dg~~l~v~~~~~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~ 281 (370)
...+++++ +++.++.+...+ |..||+...+ ....+ .........+++.++|++.++..
T Consensus 199 v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~--~~~~~-~~h~~~v~~v~~~p~~~~l~s~s 259 (354)
T 2pbi_B 199 VLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQ--CVQAF-ETHESDVNSVRYYPSGDAFASGS 259 (354)
T ss_dssp EEEEEECCCSSCCEEEEEETTSCEEEEETTTCC--EEEEE-CCCSSCEEEEEECTTSSEEEEEE
T ss_pred eEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCc--EEEEe-cCCCCCeEEEEEeCCCCEEEEEe
Confidence 45667766 567777777777 9999976532 12222 22333355678888887665543
No 203
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=98.38 E-value=0.00029 Score=62.51 Aligned_cols=177 Identities=10% Similarity=0.031 Sum_probs=101.7
Q ss_pred CCCcceEEcCCC-cEEEEecCCeEEEEe--CCeEE-EEEecCCCceeceEEcCCCcEEEEeCCCc-eEEEc-CCC--eEE
Q 017520 79 NHPEDASMDKNG-VIYTATRDGWIKRLQ--DGTWV-NWKFIDSQTLVGLTSTKEGHLIICDNANG-LHKVS-EDG--VEN 150 (370)
Q Consensus 79 ~~P~~i~~d~~G-~l~v~~~~g~I~~~~--~g~~~-~~~~~~~~p~~gl~~d~~G~L~v~~~~~g-i~~~~-~~g--~~~ 150 (370)
....++++ ++| .+.+++.+|.|..|+ +++.. .+........ .++++++++++++....| +..++ .+. .+.
T Consensus 19 ~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~ 96 (313)
T 3odt_A 19 QDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLN-SVCYDSEKELLLFGGKDTMINGVPLFATSGEDP 96 (313)
T ss_dssp SCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEE-EEEEETTTTEEEEEETTSCEEEEETTCCTTSCC
T ss_pred CCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEE-EEEECCCCCEEEEecCCCeEEEEEeeecCCCCc
Confidence 35567777 544 677777999999999 55433 3344455566 899999998665544444 44444 221 111
Q ss_pred EEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecCCCCccceEEcc-C
Q 017520 151 FLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSR-D 229 (370)
Q Consensus 151 ~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~p~gi~~~~-d 229 (370)
+.. ..+. ...+..+.+ +++..++.+ .++.|..+|.. .....+.........+++.+ +
T Consensus 97 ~~~-~~~~-~~~i~~~~~--~~~~l~~~~-----------------~d~~i~~~d~~-~~~~~~~~~~~~v~~~~~~~~~ 154 (313)
T 3odt_A 97 LYT-LIGH-QGNVCSLSF--QDGVVISGS-----------------WDKTAKVWKEG-SLVYNLQAHNASVWDAKVVSFS 154 (313)
T ss_dssp -CE-ECCC-SSCEEEEEE--ETTEEEEEE-----------------TTSEEEEEETT-EEEEEEECCSSCEEEEEEEETT
T ss_pred ccc-hhhc-ccCEEEEEe--cCCEEEEEe-----------------CCCCEEEEcCC-cEEEecccCCCceeEEEEccCC
Confidence 111 1111 134566777 354444432 34788888832 33333333344456777777 8
Q ss_pred CCEEEEEeCCc-EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCCEEEEEecC
Q 017520 230 EDYVVVCESWK-CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKL 283 (370)
Q Consensus 230 g~~l~v~~~~~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~ 283 (370)
++.++.+...+ |..|+... ....+..........+++.++|.+.++...+
T Consensus 155 ~~~l~~~~~d~~i~i~d~~~----~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg 205 (313)
T 3odt_A 155 ENKFLTASADKTIKLWQNDK----VIKTFSGIHNDVVRHLAVVDDGHFISCSNDG 205 (313)
T ss_dssp TTEEEEEETTSCEEEEETTE----EEEEECSSCSSCEEEEEEEETTEEEEEETTS
T ss_pred CCEEEEEECCCCEEEEecCc----eEEEEeccCcccEEEEEEcCCCeEEEccCCC
Confidence 88788877777 88887221 1222222233345667888888866665554
No 204
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=98.38 E-value=0.00019 Score=65.61 Aligned_cols=183 Identities=14% Similarity=0.128 Sum_probs=108.3
Q ss_pred CCCcceEEcCCCc-EEEEecCCeEEEEe--CCeEE---EEEecCCCceeceEEcCC--CcEEEE-eCCCceEEEc-CCC-
Q 017520 79 NHPEDASMDKNGV-IYTATRDGWIKRLQ--DGTWV---NWKFIDSQTLVGLTSTKE--GHLIIC-DNANGLHKVS-EDG- 147 (370)
Q Consensus 79 ~~P~~i~~d~~G~-l~v~~~~g~I~~~~--~g~~~---~~~~~~~~p~~gl~~d~~--G~L~v~-~~~~gi~~~~-~~g- 147 (370)
....+++++++|. |.+++.+|.|..|+ .+..+ .+....+... ++++.++ ++++++ ..++.|..++ .++
T Consensus 12 ~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~ 90 (379)
T 3jrp_A 12 ELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVW-RVDWAHPKFGTILASCSYDGKVLIWKEENGR 90 (379)
T ss_dssp CCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEE-EEEECCGGGCSEEEEEETTSCEEEEEEETTE
T ss_pred ccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEE-EEEeCCCCCCCEEEEeccCCEEEEEEcCCCc
Confidence 3466788998886 45566889999998 33332 2223344556 8999765 765554 4444466666 555
Q ss_pred eEEEEeecCCcccccccceEEcCC--CcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCe---EEEEecCCCCcc
Q 017520 148 VENFLSYVNGSKLRFANDVVEASD--GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNI---TTLVADGFYFAN 222 (370)
Q Consensus 148 ~~~~~~~~~g~~~~~~~~l~~d~~--G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~---~~~~~~~~~~p~ 222 (370)
...+... .+ ....+..+++.++ |++.++.. .++.|..||..++. ...+........
T Consensus 91 ~~~~~~~-~~-~~~~v~~~~~~~~~~~~~l~~~~-----------------~d~~i~v~d~~~~~~~~~~~~~~~~~~v~ 151 (379)
T 3jrp_A 91 WSQIAVH-AV-HSASVNSVQWAPHEYGPLLLVAS-----------------SDGKVSVVEFKENGTTSPIIIDAHAIGVN 151 (379)
T ss_dssp EEEEEEE-CC-CSSCEEEEEECCGGGCSEEEEEE-----------------TTSEEEEEECCTTSCCCEEEEECCTTCEE
T ss_pred eeEeeee-cC-CCcceEEEEeCCCCCCCEEEEec-----------------CCCcEEEEecCCCCceeeEEecCCCCceE
Confidence 3332221 11 1235788999998 87666543 35788888876552 222223334557
Q ss_pred ceEEcc-------------CCCEEEEEeCCc-EEEEEeCCCCCC-ceeeeccCCCCCCCceeECCC---CCEEEEEe
Q 017520 223 GVALSR-------------DEDYVVVCESWK-CRKYWLKGERKG-KLETFAENLPGAPDNINLAPD---GTFWIAII 281 (370)
Q Consensus 223 gi~~~~-------------dg~~l~v~~~~~-l~~~~~~~~~~~-~~~~~~~~~~g~p~~i~~d~~---G~lwv~~~ 281 (370)
.+++++ +++.++.+...+ |..|++...... ..........+....++++++ |++.++..
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~ 228 (379)
T 3jrp_A 152 SASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVS 228 (379)
T ss_dssp EEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE
T ss_pred EEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEe
Confidence 788988 688777777777 999988654211 111111122333556788888 66555443
No 205
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=98.38 E-value=6.8e-05 Score=69.48 Aligned_cols=187 Identities=10% Similarity=0.081 Sum_probs=118.9
Q ss_pred CcCCCcceEEcCCCcEEEEecC----------------CeEEEEe--CC--e-EEEEEec------CCCceeceEEc-C-
Q 017520 77 SVNHPEDASMDKNGVIYTATRD----------------GWIKRLQ--DG--T-WVNWKFI------DSQTLVGLTST-K- 127 (370)
Q Consensus 77 ~~~~P~~i~~d~~G~l~v~~~~----------------g~I~~~~--~g--~-~~~~~~~------~~~p~~gl~~d-~- 127 (370)
.+.....+.+|+.|+||+-|.. -+|..+| ++ + ++++..+ ...-. .+++| .
T Consensus 85 ~lvsV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~-di~VD~~~ 163 (381)
T 3q6k_A 85 ELTSIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFG-GFAVDVAN 163 (381)
T ss_dssp SSSCEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEE-EEEEEESC
T ss_pred ceEEeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccc-eEEEeccc
Confidence 3678888999999999998721 1588898 55 4 4444322 11234 78888 2
Q ss_pred ------CCcEEEEeCC-CceEEEc-CCC--eEEEEee----------cCCccc---ccccceEEcCC----C-cEEEEeC
Q 017520 128 ------EGHLIICDNA-NGLHKVS-EDG--VENFLSY----------VNGSKL---RFANDVVEASD----G-SLYFTVS 179 (370)
Q Consensus 128 ------~G~L~v~~~~-~gi~~~~-~~g--~~~~~~~----------~~g~~~---~~~~~l~~d~~----G-~l~v~d~ 179 (370)
++.+||+|.. .||+.++ .+| .+.+... ..|..+ ..+++|+.+++ + .||+.-.
T Consensus 164 ~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~pl 243 (381)
T 3q6k_A 164 PKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAG 243 (381)
T ss_dssp TTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEES
T ss_pred CCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEEC
Confidence 4569999976 6899999 777 5544211 122222 35678899886 4 6999865
Q ss_pred CCCCCCccceecccccCCCceEEEEeC------C-CCeEEEEecCCCCcc--ceEEc-cCCCEEEEEeCCc--EEEEEeC
Q 017520 180 SSKYLPHEYCLDILEGKPHGQLLKYDP------S-SNITTLVADGFYFAN--GVALS-RDEDYVVVCESWK--CRKYWLK 247 (370)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~g~l~~~d~------~-t~~~~~~~~~~~~p~--gi~~~-~dg~~l~v~~~~~--l~~~~~~ 247 (370)
+ ...+|++.. . ...++.+........ ++++| .+|. ||+++... |.+++.+
T Consensus 244 s-----------------s~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~-ly~~~~~~~aI~~w~~~ 305 (381)
T 3q6k_A 244 S-----------------AIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKV-IFFAEANTKQVSCWNTQ 305 (381)
T ss_dssp S-----------------CSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCE-EEEEESSSSEEEEEETT
T ss_pred C-----------------CCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCe-EEEEeccCCeEEEEeCC
Confidence 3 235666642 1 234444433322233 45676 5565 99998876 9999977
Q ss_pred C-C-CCCceeeecc-CCCCCCCceeECCCCCEEEEEec
Q 017520 248 G-E-RKGKLETFAE-NLPGAPDNINLAPDGTFWIAIIK 282 (370)
Q Consensus 248 ~-~-~~~~~~~~~~-~~~g~p~~i~~d~~G~lwv~~~~ 282 (370)
+ + +.++.+.+.. ..-..|+++.+|.+|++|+.+++
T Consensus 306 ~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~sn~ 343 (381)
T 3q6k_A 306 KMPLRMKNTDVVYTSSRFVFGTDISVDSKGGLWFMSNG 343 (381)
T ss_dssp SCSBCGGGEEEEEECTTCCSEEEEEECTTSCEEEEECS
T ss_pred CCccccCceEEEEECCCccccCeEEECCCCeEEEEECc
Confidence 6 3 1234444432 22237999999999999999865
No 206
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=98.37 E-value=0.001 Score=60.07 Aligned_cols=176 Identities=11% Similarity=0.125 Sum_probs=110.5
Q ss_pred CCcceEEcCCCc-EEEEecCCeEEEEe--CCeE-EEEEecCCCceeceEEcCCCcEEEEeCCCc-eEEEcCCC--eEEEE
Q 017520 80 HPEDASMDKNGV-IYTATRDGWIKRLQ--DGTW-VNWKFIDSQTLVGLTSTKEGHLIICDNANG-LHKVSEDG--VENFL 152 (370)
Q Consensus 80 ~P~~i~~d~~G~-l~v~~~~g~I~~~~--~g~~-~~~~~~~~~p~~gl~~d~~G~L~v~~~~~g-i~~~~~~g--~~~~~ 152 (370)
...++++.++|. |..++.+|.|..|+ +++. ..+........ ++++++++.++++....+ |..++..+ ...+.
T Consensus 67 ~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~~ 145 (319)
T 3frx_A 67 IVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVM-SVDIDKKASMIISGSRDKTIKVWTIKGQCLATLL 145 (319)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEE-EEEECTTSCEEEEEETTSCEEEEETTSCEEEEEC
T ss_pred cEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEE-EEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEe
Confidence 456678888886 45666899999999 6653 44444555667 899999998766554444 55555334 43332
Q ss_pred eecCCcccccccceEEcCC------CcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecC-CCCccceE
Q 017520 153 SYVNGSKLRFANDVVEASD------GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG-FYFANGVA 225 (370)
Q Consensus 153 ~~~~g~~~~~~~~l~~d~~------G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~-~~~p~gi~ 225 (370)
.. ...+..+.+.+. +...++.+ .++.|..+|..+.+......+ ....+.++
T Consensus 146 ~h-----~~~v~~~~~~~~~~~~~~~~~l~s~~-----------------~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~ 203 (319)
T 3frx_A 146 GH-----NDWVSQVRVVPNEKADDDSVTIISAG-----------------NDKMVKAWNLNQFQIEADFIGHNSNINTLT 203 (319)
T ss_dssp CC-----SSCEEEEEECCC------CCEEEEEE-----------------TTSCEEEEETTTTEEEEEECCCCSCEEEEE
T ss_pred cc-----CCcEEEEEEccCCCCCCCccEEEEEe-----------------CCCEEEEEECCcchhheeecCCCCcEEEEE
Confidence 11 124556666653 33444432 457888999887765443333 34557899
Q ss_pred EccCCCEEEEEeCCc-EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCCEEEEEec
Q 017520 226 LSRDEDYVVVCESWK-CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 282 (370)
Q Consensus 226 ~~~dg~~l~v~~~~~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~ 282 (370)
++|+++.+..+...+ |..||+...+. ...+. .......++++++|.+.++...
T Consensus 204 ~sp~g~~l~s~~~dg~i~iwd~~~~~~--~~~~~--~~~~v~~~~~sp~~~~la~~~~ 257 (319)
T 3frx_A 204 ASPDGTLIASAGKDGEIMLWNLAAKKA--MYTLS--AQDEVFSLAFSPNRYWLAAATA 257 (319)
T ss_dssp ECTTSSEEEEEETTCEEEEEETTTTEE--EEEEE--CCSCEEEEEECSSSSEEEEEET
T ss_pred EcCCCCEEEEEeCCCeEEEEECCCCcE--EEEec--CCCcEEEEEEcCCCCEEEEEcC
Confidence 999999777777777 88888765321 12221 1223456888999976665544
No 207
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=98.37 E-value=1.1e-05 Score=81.37 Aligned_cols=136 Identities=9% Similarity=-0.039 Sum_probs=86.7
Q ss_pred CCcceEEcCCCcEEEEecCCeEEEEe--CCeEEEEEecCC----CceeceEEcCCCcEEE-EeCC---------CceEEE
Q 017520 80 HPEDASMDKNGVIYTATRDGWIKRLQ--DGTWVNWKFIDS----QTLVGLTSTKEGHLII-CDNA---------NGLHKV 143 (370)
Q Consensus 80 ~P~~i~~d~~G~l~v~~~~g~I~~~~--~g~~~~~~~~~~----~p~~gl~~d~~G~L~v-~~~~---------~gi~~~ 143 (370)
.+.++++.+||.+++.+.+|.|+.++ +|+......... .+. ++++++||+..+ +... ..++.+
T Consensus 18 ~~~~~~~spdg~~~~~~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~-~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~ 96 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYREQKGTVRLWNVETNTSTVLIEGKKIESLRAI-RYEISPDREYALFSYNVEPIYQHSYTGYYVLS 96 (723)
T ss_dssp CCCCCCBSSSSCBCCCCSSSCEEEBCGGGCCCEEEECTTTTTTTTCS-EEEECTTSSEEEEEESCCCCSSSCCCSEEEEE
T ss_pred cccccEEcCCCcEEEEeCCCCEEEEECCCCcEEEEeccccccccccc-eEEECCCCCEEEEEecCccceeecceeeEEEE
Confidence 46778888999865556788899999 666555443322 256 899999998444 4322 345666
Q ss_pred c-CCC-eEEEEeecCCcccccccceEEcCCCc-EEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecCCC-
Q 017520 144 S-EDG-VENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFY- 219 (370)
Q Consensus 144 ~-~~g-~~~~~~~~~g~~~~~~~~l~~d~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~- 219 (370)
+ .+| .+.+... .+ ....+..++++|||+ |.++. .+.|+.+|.++++...+.....
T Consensus 97 d~~~~~~~~l~~~-~~-~~~~~~~~~~SPdG~~la~~~-------------------~~~i~~~~~~~g~~~~~~~~~~~ 155 (723)
T 1xfd_A 97 KIPHGDPQSLDPP-EV-SNAKLQYAGWGPKGQQLIFIF-------------------ENNIYYCAHVGKQAIRVVSTGKE 155 (723)
T ss_dssp ESSSCCCEECCCT-TC-CSCCCSBCCBCSSTTCEEEEE-------------------TTEEEEESSSSSCCEEEECCCBT
T ss_pred ECCCCceEeccCC-cc-ccccccccEECCCCCEEEEEE-------------------CCeEEEEECCCCceEEEecCCCC
Confidence 6 555 4333211 11 112366789999995 55442 1479999988776655543311
Q ss_pred ------------------CccceEEccCCCEEEEEe
Q 017520 220 ------------------FANGVALSRDEDYVVVCE 237 (370)
Q Consensus 220 ------------------~p~gi~~~~dg~~l~v~~ 237 (370)
...+++++|||+.|+++.
T Consensus 156 ~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~ 191 (723)
T 1xfd_A 156 GVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAA 191 (723)
T ss_dssp TTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEE
T ss_pred CceECcccceeEEEEeccCcceEEECCCCCEEEEEE
Confidence 125799999999887765
No 208
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=98.37 E-value=0.00017 Score=71.59 Aligned_cols=182 Identities=10% Similarity=0.039 Sum_probs=107.3
Q ss_pred CCCcceEEcCCCcEEEEecCCeEEEEe--CCe-EEEEEecCCCceeceEEcCCCcEEEEeCCCceE-EEc-CCC---eEE
Q 017520 79 NHPEDASMDKNGVIYTATRDGWIKRLQ--DGT-WVNWKFIDSQTLVGLTSTKEGHLIICDNANGLH-KVS-EDG---VEN 150 (370)
Q Consensus 79 ~~P~~i~~d~~G~l~v~~~~g~I~~~~--~g~-~~~~~~~~~~p~~gl~~d~~G~L~v~~~~~gi~-~~~-~~g---~~~ 150 (370)
..|..++++++|+..+...++.|..++ +++ ...+........ .++++|+|++.++....|.+ .++ .++ ...
T Consensus 19 g~~~~~~~spdg~~l~~~~~~~v~l~~~~~~~~~~~~~~h~~~v~-~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~ 97 (611)
T 1nr0_A 19 GTAVVLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYTEHSHQTT-VAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKT 97 (611)
T ss_dssp TCCCCCEECTTSSEEEEEETTEEEEEETTCSSCCEEECCCSSCEE-EEEECTTSSEEEEEETTSEEEEEESSSTTCCEEE
T ss_pred CceeEEeeCCCCCEEEeCCCCEEEEecCCCcccCeEecCCCCceE-EEEECCCCcEEEEEeCCCCEEEeECCCCcceeeE
Confidence 368889999999766555567888888 454 444444455567 89999999877755445544 445 343 221
Q ss_pred EEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecCCCCccceEEccCC
Q 017520 151 FLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDE 230 (370)
Q Consensus 151 ~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~p~gi~~~~dg 230 (370)
... +. ...+.+++++++|+..++.+... ...+.|+.+|.. .....+.......+.++++|++
T Consensus 98 ~~~---~~-~~~v~~v~fs~dg~~l~~~~~~~-------------~~~~~v~~wd~~-~~~~~l~gh~~~v~~v~f~p~~ 159 (611)
T 1nr0_A 98 TIP---VF-SGPVKDISWDSESKRIAAVGEGR-------------ERFGHVFLFDTG-TSNGNLTGQARAMNSVDFKPSR 159 (611)
T ss_dssp EEE---CS-SSCEEEEEECTTSCEEEEEECCS-------------SCSEEEEETTTC-CBCBCCCCCSSCEEEEEECSSS
T ss_pred eec---cc-CCceEEEEECCCCCEEEEEECCC-------------CceeEEEEeeCC-CCcceecCCCCCceEEEECCCC
Confidence 111 11 13678999999998666543200 012467777642 2222222223345789999998
Q ss_pred CE-EEEEeCCc-EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCCEEEEEec
Q 017520 231 DY-VVVCESWK-CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 282 (370)
Q Consensus 231 ~~-l~v~~~~~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~ 282 (370)
.. +..+...+ |..|+....+ ....+ ....+....++++++|++.++...
T Consensus 160 ~~~l~s~s~D~~v~lwd~~~~~--~~~~l-~~H~~~V~~v~fspdg~~las~s~ 210 (611)
T 1nr0_A 160 PFRIISGSDDNTVAIFEGPPFK--FKSTF-GEHTKFVHSVRYNPDGSLFASTGG 210 (611)
T ss_dssp SCEEEEEETTSCEEEEETTTBE--EEEEE-CCCSSCEEEEEECTTSSEEEEEET
T ss_pred CeEEEEEeCCCeEEEEECCCCe--Eeeee-ccccCceEEEEECCCCCEEEEEEC
Confidence 74 55555555 8878754321 11222 223334556888999987666543
No 209
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=98.35 E-value=0.0012 Score=60.86 Aligned_cols=147 Identities=9% Similarity=-0.007 Sum_probs=92.4
Q ss_pred CCcceEEcC-CC-cEEEEecCCeEEEEe--CCeEEEEEecCCCceeceEEcC---CCcEEE-EeCCCceEEEc-CCC--e
Q 017520 80 HPEDASMDK-NG-VIYTATRDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTK---EGHLII-CDNANGLHKVS-EDG--V 148 (370)
Q Consensus 80 ~P~~i~~d~-~G-~l~v~~~~g~I~~~~--~g~~~~~~~~~~~p~~gl~~d~---~G~L~v-~~~~~gi~~~~-~~g--~ 148 (370)
...++++.+ ++ .+.+++.+|.|..|+ +++............ .+.+.+ ++.+++ +...+.+..++ .++ .
T Consensus 101 ~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~ 179 (408)
T 4a11_B 101 SVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVY-SHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCS 179 (408)
T ss_dssp CEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEECSSCEE-EEEECSSCSSCCEEEEEESSSSEEEEESSSSCCC
T ss_pred cEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceeccCCCcee-eeEeecCCCCCcEEEEEcCCCeEEEEeCCCccee
Confidence 456788877 55 466677899999999 555444444444455 777775 343444 44445577777 555 4
Q ss_pred EEEEeecCCcccccccceEEcCCCc-EEEEeCCCCCCCccceecccccCCCceEEEEeCCCCe--EEEE-----------
Q 017520 149 ENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNI--TTLV----------- 214 (370)
Q Consensus 149 ~~~~~~~~g~~~~~~~~l~~d~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~--~~~~----------- 214 (370)
..+... ...+..+++.++|. ++++.. .++.|..||..++. ...+
T Consensus 180 ~~~~~~-----~~~v~~~~~~~~~~~ll~~~~-----------------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~ 237 (408)
T 4a11_B 180 HILQGH-----RQEILAVSWSPRYDYILATAS-----------------ADSRVKLWDVRRASGCLITLDQHNGKKSQAV 237 (408)
T ss_dssp EEECCC-----CSCEEEEEECSSCTTEEEEEE-----------------TTSCEEEEETTCSSCCSEECCTTTTCSCCCT
T ss_pred eeecCC-----CCcEEEEEECCCCCcEEEEEc-----------------CCCcEEEEECCCCCcccccccccccccceee
Confidence 333211 13577899999986 555533 34678888875443 1111
Q ss_pred ----ecCCCCccceEEccCCCEEEEEeCCc-EEEEEeCCC
Q 017520 215 ----ADGFYFANGVALSRDEDYVVVCESWK-CRKYWLKGE 249 (370)
Q Consensus 215 ----~~~~~~p~gi~~~~dg~~l~v~~~~~-l~~~~~~~~ 249 (370)
.........++++++++.++.+...+ |..|++...
T Consensus 238 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~ 277 (408)
T 4a11_B 238 ESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNG 277 (408)
T ss_dssp TTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC
T ss_pred ccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCC
Confidence 01122346789999999888888777 999998654
No 210
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.34 E-value=3.4e-05 Score=71.42 Aligned_cols=150 Identities=8% Similarity=-0.056 Sum_probs=90.4
Q ss_pred ceEEcCCCc-EEEEecCCeEEEEe--CCeEEEEEecC-CCce-eceEEcCCCcEEEEe----------------------
Q 017520 83 DASMDKNGV-IYTATRDGWIKRLQ--DGTWVNWKFID-SQTL-VGLTSTKEGHLIICD---------------------- 135 (370)
Q Consensus 83 ~i~~d~~G~-l~v~~~~g~I~~~~--~g~~~~~~~~~-~~p~-~gl~~d~~G~L~v~~---------------------- 135 (370)
++++.+||. |+++..++.|+.++ +++........ +... ....++++|.++++.
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (388)
T 3pe7_A 85 GGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFT 164 (388)
T ss_dssp SCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGG
T ss_pred ceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhcc
Confidence 568888884 77777777899999 56554443322 2111 023457888877642
Q ss_pred -CCCceEEEc-CCC-eEEEEeecCCcccccccceEEcC-CCc-EEEEeCCCCCCCccceecccccCCCceEEEEeCCCCe
Q 017520 136 -NANGLHKVS-EDG-VENFLSYVNGSKLRFANDVVEAS-DGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNI 210 (370)
Q Consensus 136 -~~~gi~~~~-~~g-~~~~~~~~~g~~~~~~~~l~~d~-~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~ 210 (370)
....|+.++ .+| .+.+... . ..+..++++| ||+ |.+..... . ......|+.+|.+++.
T Consensus 165 ~~~~~l~~~d~~~g~~~~l~~~-~----~~~~~~~~sp~dg~~l~~~~~~~-~-----------~~~~~~l~~~d~~~~~ 227 (388)
T 3pe7_A 165 KPCCRLMRVDLKTGESTVILQE-N----QWLGHPIYRPYDDSTVAFCHEGP-H-----------DLVDARMWLINEDGTN 227 (388)
T ss_dssp CCCEEEEEEETTTCCEEEEEEE-S----SCEEEEEEETTEEEEEEEEECSC-T-----------TTSSCSEEEEETTSCC
T ss_pred CCcceEEEEECCCCceEEeecC-C----ccccccEECCCCCCEEEEEEecC-C-----------CCCcceEEEEeCCCCc
Confidence 113588888 666 5555432 1 2456789999 885 44443210 0 0124579999988776
Q ss_pred EEEEecCCC--CccceEEccCCCEE-EEEeCCc-----EEEEEeCCC
Q 017520 211 TTLVADGFY--FANGVALSRDEDYV-VVCESWK-----CRKYWLKGE 249 (370)
Q Consensus 211 ~~~~~~~~~--~p~gi~~~~dg~~l-~v~~~~~-----l~~~~~~~~ 249 (370)
.+.+..... .....+++|||+.| |++...+ |+++++++.
T Consensus 228 ~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g 274 (388)
T 3pe7_A 228 MRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETL 274 (388)
T ss_dssp CEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTC
T ss_pred eEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCC
Confidence 665544321 23457899999866 4444322 888887654
No 211
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=98.34 E-value=0.00011 Score=74.94 Aligned_cols=177 Identities=11% Similarity=0.042 Sum_probs=110.3
Q ss_pred CCcceEEcCCCc-EEEEecCCeEEEEe--CCeE-EEEEecCCCceeceEEcCCCcEEE-EeCCCceEEEc-CCC--eEEE
Q 017520 80 HPEDASMDKNGV-IYTATRDGWIKRLQ--DGTW-VNWKFIDSQTLVGLTSTKEGHLII-CDNANGLHKVS-EDG--VENF 151 (370)
Q Consensus 80 ~P~~i~~d~~G~-l~v~~~~g~I~~~~--~g~~-~~~~~~~~~p~~gl~~d~~G~L~v-~~~~~gi~~~~-~~g--~~~~ 151 (370)
...++++.++|. |.+++.+|.|..|+ +++. ..+....+... .+++.++|..++ +..++.|..++ .++ ....
T Consensus 57 ~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~-~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~ 135 (814)
T 3mkq_A 57 PVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIR-SIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQT 135 (814)
T ss_dssp CEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEE-EEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEE
T ss_pred cEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEE-EEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEE
Confidence 456788888875 66777899999999 5553 44444455667 899999997544 44444455666 443 2222
Q ss_pred EeecCCcccccccceEEcC-CCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEE-EEecCC-CCccceEEcc
Q 017520 152 LSYVNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITT-LVADGF-YFANGVALSR 228 (370)
Q Consensus 152 ~~~~~g~~~~~~~~l~~d~-~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~-~~~~~~-~~p~gi~~~~ 228 (370)
.... ...+..+++.| +|+.+++.+ .++.|..||..++... .+.... .....+++++
T Consensus 136 ~~~~----~~~v~~~~~~p~~~~~l~~~~-----------------~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~ 194 (814)
T 3mkq_A 136 FEGH----EHFVMCVAFNPKDPSTFASGC-----------------LDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYP 194 (814)
T ss_dssp EECC----SSCEEEEEEETTEEEEEEEEE-----------------TTSEEEEEETTCSSCSEEEECCCTTCCCEEEECC
T ss_pred EcCC----CCcEEEEEEEcCCCCEEEEEe-----------------CCCeEEEEECCCCcceeEEecCCCCCEEEEEEEE
Confidence 1111 13577889998 776665543 3578999997655432 222222 4567889998
Q ss_pred --CCCEEEEEeCCc-EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCCEEEEEe
Q 017520 229 --DEDYVVVCESWK-CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAII 281 (370)
Q Consensus 229 --dg~~l~v~~~~~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~ 281 (370)
+++.++.+...+ |..|++...+ ....+. ...+....++++++|.+.++..
T Consensus 195 ~~~~~~l~~~~~dg~i~~~d~~~~~--~~~~~~-~~~~~v~~~~~~~~~~~l~~~~ 247 (814)
T 3mkq_A 195 LPDKPYMITASDDLTIKIWDYQTKS--CVATLE-GHMSNVSFAVFHPTLPIIISGS 247 (814)
T ss_dssp STTCCEEEEECTTSEEEEEETTTTE--EEEEEE-CCSSCEEEEEECSSSSEEEEEE
T ss_pred CCCCCEEEEEeCCCEEEEEECCCCc--EEEEEc-CCCCCEEEEEEcCCCCEEEEEe
Confidence 898777777777 8888875432 122221 2223345677888887555543
No 212
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=98.34 E-value=2.3e-05 Score=73.45 Aligned_cols=180 Identities=14% Similarity=0.154 Sum_probs=109.3
Q ss_pred CCcceEEcC--CCcEEEEecCC----eEEEEe-CC-eEEEEEecC--------------CCceeceEEcC---CCcEEEE
Q 017520 80 HPEDASMDK--NGVIYTATRDG----WIKRLQ-DG-TWVNWKFID--------------SQTLVGLTSTK---EGHLIIC 134 (370)
Q Consensus 80 ~P~~i~~d~--~G~l~v~~~~g----~I~~~~-~g-~~~~~~~~~--------------~~p~~gl~~d~---~G~L~v~ 134 (370)
...+|++|+ ++.||+++..| .|++.+ .| .++.+.... .... +|++++ .+.||++
T Consensus 56 ~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~-~l~~~~~~~~~~l~~g 134 (394)
T 3b7f_A 56 TIHHIVQDPREPERMLMAARTGHLGPTVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVF-WLTPGHASEPGTWYAG 134 (394)
T ss_dssp EEEEEEECSSSTTCEEEEEEC--CCEEEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEE-EEEECCTTSTTCEEEE
T ss_pred ceEEEEECCCCCCeEEEEecCCCCCccEEEeCCCCCCceECCccccCCCccccccccccccee-EEEeCCCCCCCEEEEE
Confidence 467899998 78999999777 899987 44 355543210 1234 678885 6789998
Q ss_pred eCCCceEEEcCCC--eEEEEeec--C------------CcccccccceEEcC--CCcEEEEeCCCCCCCccceecccccC
Q 017520 135 DNANGLHKVSEDG--VENFLSYV--N------------GSKLRFANDVVEAS--DGSLYFTVSSSKYLPHEYCLDILEGK 196 (370)
Q Consensus 135 ~~~~gi~~~~~~g--~~~~~~~~--~------------g~~~~~~~~l~~d~--~G~l~v~d~~~~~~~~~~~~~~~~~~ 196 (370)
....+|++.+..| ++.+.... + +.....+..|++|+ ++++|++..
T Consensus 135 ~~~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~----------------- 197 (394)
T 3b7f_A 135 TSPQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMS----------------- 197 (394)
T ss_dssp EETTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEE-----------------
T ss_pred ecCCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEEC-----------------
Confidence 7677899988655 55442210 0 11122456789987 468999853
Q ss_pred CCceEEEEeCCCCeEEEEecCC-------------CCccceEEccC-CCEEEEEeCCcEEEEEeCCCCCCceeeeccCCC
Q 017520 197 PHGQLLKYDPSSNITTLVADGF-------------YFANGVALSRD-EDYVVVCESWKCRKYWLKGERKGKLETFAENLP 262 (370)
Q Consensus 197 ~~g~l~~~d~~t~~~~~~~~~~-------------~~p~gi~~~~d-g~~l~v~~~~~l~~~~~~~~~~~~~~~~~~~~~ 262 (370)
.++|++.+..+..++.+.... .....++++++ .+.+|++...+|++.+-.+. +.+.+...++
T Consensus 198 -~ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~gl~~s~D~G~---tW~~~~~~l~ 273 (394)
T 3b7f_A 198 -SGGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCGIYRMDRREG---VWKRIGDAMP 273 (394)
T ss_dssp -TBEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTEEEEEETTTT---EEECGGGGSC
T ss_pred -CCCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCeEEEeCCCCC---cceECCCCCC
Confidence 256888876655665543321 11346778875 45688887666888863332 2222221122
Q ss_pred C----CCCceeEC--CCCCEEEEEe
Q 017520 263 G----APDNINLA--PDGTFWIAII 281 (370)
Q Consensus 263 g----~p~~i~~d--~~G~lwv~~~ 281 (370)
. +...+++| ..+.+|+++.
T Consensus 274 ~~~~~~~~~i~~~p~~~~~l~~~t~ 298 (394)
T 3b7f_A 274 REVGDIGFPIVVHQRDPRTVWVFPM 298 (394)
T ss_dssp TTTCSCEEEEEECSSCTTCEEEEEC
T ss_pred CCCccceEEEEECCCCCCEEEEEec
Confidence 1 11236666 4578999874
No 213
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.32 E-value=0.00026 Score=66.90 Aligned_cols=181 Identities=13% Similarity=0.112 Sum_probs=109.1
Q ss_pred CCCcceEEcCC-Cc-EEEEecCCeEEEEe--C----------Ce-EEEEEecCCCceeceEEcCCCc-EEEEeCC-CceE
Q 017520 79 NHPEDASMDKN-GV-IYTATRDGWIKRLQ--D----------GT-WVNWKFIDSQTLVGLTSTKEGH-LIICDNA-NGLH 141 (370)
Q Consensus 79 ~~P~~i~~d~~-G~-l~v~~~~g~I~~~~--~----------g~-~~~~~~~~~~p~~gl~~d~~G~-L~v~~~~-~gi~ 141 (370)
..+.++++.++ +. +++++.+|.|..|+ . .. ...+......+. ++++++++. ++++... +.|.
T Consensus 129 ~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~-~l~~~~~~~~~l~s~~~dg~i~ 207 (430)
T 2xyi_A 129 GEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGY-GLSWNPNLNGYLLSASDDHTIC 207 (430)
T ss_dssp SCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCC-CEEECTTSTTEEEEECTTSCEE
T ss_pred CcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeE-EEEeCCCCCCeEEEEeCCCeEE
Confidence 36788999886 43 45566889999998 3 22 233444455667 999999887 6555444 4466
Q ss_pred EEc-CCC---eEEEE--eecCCcccccccceEEcC-CCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCC----e
Q 017520 142 KVS-EDG---VENFL--SYVNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSN----I 210 (370)
Q Consensus 142 ~~~-~~g---~~~~~--~~~~g~~~~~~~~l~~d~-~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~----~ 210 (370)
.++ ..+ ...+. ....+ ....++++++.+ ++.++++.. .++.|..||..++ .
T Consensus 208 vwd~~~~~~~~~~~~~~~~~~~-h~~~v~~v~~~p~~~~~l~s~~-----------------~dg~i~i~d~~~~~~~~~ 269 (430)
T 2xyi_A 208 LWDINATPKEHRVIDAKNIFTG-HTAVVEDVAWHLLHESLFGSVA-----------------DDQKLMIWDTRNNNTSKP 269 (430)
T ss_dssp EEETTSCCBGGGEEECSEEECC-CSSCEEEEEECSSCTTEEEEEE-----------------TTSEEEEEETTCSCSSSC
T ss_pred EEeCCCCCCCCceeccceeecC-CCCCEeeeEEeCCCCCEEEEEe-----------------CCCeEEEEECCCCCCCcc
Confidence 666 332 11110 11111 123578899998 567777754 3578999998755 2
Q ss_pred EEEEecCCCCccceEEccCCCEEE-EEeCCc-EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCC-EEEEE
Q 017520 211 TTLVADGFYFANGVALSRDEDYVV-VCESWK-CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGT-FWIAI 280 (370)
Q Consensus 211 ~~~~~~~~~~p~gi~~~~dg~~l~-v~~~~~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~-lwv~~ 280 (370)
...+......++.+++++++..++ .+...+ |..|++..... ....+. ...+....+++.++|. ++++.
T Consensus 270 ~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~-~~~~~~-~h~~~v~~i~~sp~~~~~l~s~ 340 (430)
T 2xyi_A 270 SHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL-KLHSFE-SHKDEIFQVQWSPHNETILASS 340 (430)
T ss_dssp SEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTS-CSEEEE-CCSSCEEEEEECSSCTTEEEEE
T ss_pred eeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCC-CeEEee-cCCCCEEEEEECCCCCCEEEEE
Confidence 233333344578899999987544 555556 99999865321 122222 2233455688888884 45444
No 214
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=98.32 E-value=0.00026 Score=71.29 Aligned_cols=177 Identities=14% Similarity=0.135 Sum_probs=108.6
Q ss_pred CCcceEEcCCC-c-EEEEecCCeEEEEe-C-C-----e-EEEEEecCCCceeceEEcCCCcEEEEeCCCc-eEEEc-CCC
Q 017520 80 HPEDASMDKNG-V-IYTATRDGWIKRLQ-D-G-----T-WVNWKFIDSQTLVGLTSTKEGHLIICDNANG-LHKVS-EDG 147 (370)
Q Consensus 80 ~P~~i~~d~~G-~-l~v~~~~g~I~~~~-~-g-----~-~~~~~~~~~~p~~gl~~d~~G~L~v~~~~~g-i~~~~-~~g 147 (370)
...+|++.+++ + |..++.+|.|..|+ . + . ...+........ +++++++|++.++....| |..++ .++
T Consensus 384 ~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~-~v~~s~~g~~l~sgs~Dg~v~vwd~~~~ 462 (694)
T 3dm0_A 384 MVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVE-DVVLSSDGQFALSGSWDGELRLWDLAAG 462 (694)
T ss_dssp CEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEE-EEEECTTSSEEEEEETTSEEEEEETTTT
T ss_pred eeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEE-EEEECCCCCEEEEEeCCCcEEEEECCCC
Confidence 45677777643 4 55677899999998 2 1 1 223344455567 899999998766554445 55555 566
Q ss_pred --eEEEEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecC----CCCc
Q 017520 148 --VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG----FYFA 221 (370)
Q Consensus 148 --~~~~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~----~~~p 221 (370)
...+... ...+..++++++|+..++.+ .++.|..+|..+.....+... ....
T Consensus 463 ~~~~~~~~h-----~~~v~~~~~s~~~~~l~s~s-----------------~D~~i~iwd~~~~~~~~~~~~~~~h~~~v 520 (694)
T 3dm0_A 463 VSTRRFVGH-----TKDVLSVAFSLDNRQIVSAS-----------------RDRTIKLWNTLGECKYTISEGGEGHRDWV 520 (694)
T ss_dssp EEEEEEECC-----SSCEEEEEECTTSSCEEEEE-----------------TTSCEEEECTTSCEEEEECSSTTSCSSCE
T ss_pred cceeEEeCC-----CCCEEEEEEeCCCCEEEEEe-----------------CCCEEEEEECCCCcceeeccCCCCCCCcE
Confidence 3333211 13577899999998666643 346788888764443333221 1234
Q ss_pred cceEEccCC--CEEEEEeCCc-EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCCEEEEEec
Q 017520 222 NGVALSRDE--DYVVVCESWK-CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 282 (370)
Q Consensus 222 ~gi~~~~dg--~~l~v~~~~~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~ 282 (370)
..+++++++ ..++.+...+ |..||+...+. ...+ ....+....++++++|++.++...
T Consensus 521 ~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~--~~~~-~~h~~~v~~v~~spdg~~l~sg~~ 581 (694)
T 3dm0_A 521 SCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKL--RSTL-AGHTGYVSTVAVSPDGSLCASGGK 581 (694)
T ss_dssp EEEEECSCSSSCEEEEEETTSCEEEEETTTCCE--EEEE-CCCSSCEEEEEECTTSSEEEEEET
T ss_pred EEEEEeCCCCcceEEEEeCCCeEEEEECCCCcE--EEEE-cCCCCCEEEEEEeCCCCEEEEEeC
Confidence 678899886 4455556666 88898765321 2222 233344566889999987666543
No 215
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=98.32 E-value=0.00048 Score=62.83 Aligned_cols=182 Identities=11% Similarity=0.079 Sum_probs=108.2
Q ss_pred CCcceEEcCCCcE-EEEecCCeEEEEe--CCe-EEEEEecCCCceeceEEcCCCcEEEEeCC-CceEEEcCCC-eEEEEe
Q 017520 80 HPEDASMDKNGVI-YTATRDGWIKRLQ--DGT-WVNWKFIDSQTLVGLTSTKEGHLIICDNA-NGLHKVSEDG-VENFLS 153 (370)
Q Consensus 80 ~P~~i~~d~~G~l-~v~~~~g~I~~~~--~g~-~~~~~~~~~~p~~gl~~d~~G~L~v~~~~-~gi~~~~~~g-~~~~~~ 153 (370)
...++++.++|.+ ..++.+|.|..|+ +++ ...+........ +++++++|+.+++... +.|..++-.+ ......
T Consensus 78 ~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~-~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~ 156 (343)
T 2xzm_R 78 FVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVY-SVAFSPDNRQILSAGAEREIKLWNILGECKFSSA 156 (343)
T ss_dssp CEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEE-EEEECSSTTEEEEEETTSCEEEEESSSCEEEECC
T ss_pred ceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEE-EEEECCCCCEEEEEcCCCEEEEEeccCCceeeee
Confidence 4567888888865 4566899999999 555 344544555677 9999999986554434 4455555333 221111
Q ss_pred ecCCcccccccceEEcCCC----------cEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecCCCCccc
Q 017520 154 YVNGSKLRFANDVVEASDG----------SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANG 223 (370)
Q Consensus 154 ~~~g~~~~~~~~l~~d~~G----------~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~p~g 223 (370)
...+ ....+..+++.+++ .++++.+ .++.|..||........+.......+.
T Consensus 157 ~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~-----------------~d~~i~iwd~~~~~~~~~~~h~~~v~~ 218 (343)
T 2xzm_R 157 EKEN-HSDWVSCVRYSPIMKSANKVQPFAPYFASVG-----------------WDGRLKVWNTNFQIRYTFKAHESNVNH 218 (343)
T ss_dssp TTTS-CSSCEEEEEECCCCCSCSCCCSSCCEEEEEE-----------------TTSEEEEEETTTEEEEEEECCSSCEEE
T ss_pred cccC-CCceeeeeeeccccccccccCCCCCEEEEEc-----------------CCCEEEEEcCCCceeEEEcCccccceE
Confidence 1111 12346677887776 3444322 457888888653333333333345678
Q ss_pred eEEccCCCEEEEEeCCc-EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCCEEEEEecC
Q 017520 224 VALSRDEDYVVVCESWK-CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKL 283 (370)
Q Consensus 224 i~~~~dg~~l~v~~~~~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~ 283 (370)
+++++||+.+..+...+ |..||+..... ....+. .......++++++|.+..+...+
T Consensus 219 ~~~s~~g~~l~sgs~dg~v~iwd~~~~~~-~~~~~~--~~~~v~~v~~sp~~~~la~~~d~ 276 (343)
T 2xzm_R 219 LSISPNGKYIATGGKDKKLLIWDILNLTY-PQREFD--AGSTINQIAFNPKLQWVAVGTDQ 276 (343)
T ss_dssp EEECTTSSEEEEEETTCEEEEEESSCCSS-CSEEEE--CSSCEEEEEECSSSCEEEEEESS
T ss_pred EEECCCCCEEEEEcCCCeEEEEECCCCcc-cceeec--CCCcEEEEEECCCCCEEEEECCC
Confidence 99999999777777777 88888743211 111221 11225568888988766554443
No 216
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=98.31 E-value=0.00044 Score=61.31 Aligned_cols=220 Identities=13% Similarity=0.086 Sum_probs=129.2
Q ss_pred CCcceEEcCCCc-EEEEecCCeEEEEe--CC---e-EEEEEecCCCceeceEEcCCCcEEEEeCCCceEEEcCCC--eEE
Q 017520 80 HPEDASMDKNGV-IYTATRDGWIKRLQ--DG---T-WVNWKFIDSQTLVGLTSTKEGHLIICDNANGLHKVSEDG--VEN 150 (370)
Q Consensus 80 ~P~~i~~d~~G~-l~v~~~~g~I~~~~--~g---~-~~~~~~~~~~p~~gl~~d~~G~L~v~~~~~gi~~~~~~g--~~~ 150 (370)
...++++.++|. +++++.+|.|..++ +. + ...+........ .+.++ ...++.+...+.+..++ .+ ...
T Consensus 61 ~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~-~~~l~~~~~d~~i~~~d-~~~~~~~ 137 (313)
T 3odt_A 61 FLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVC-SLSFQ-DGVVISGSWDKTAKVWK-EGSLVYN 137 (313)
T ss_dssp CEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEE-EEEEE-TTEEEEEETTSEEEEEE-TTEEEEE
T ss_pred cEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEE-EEEec-CCEEEEEeCCCCEEEEc-CCcEEEe
Confidence 466788888775 55667889888888 22 2 333333344455 78884 33455555444455555 34 333
Q ss_pred EEeecCCcccccccceEEcC-CCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEec-CCCCccceEEcc
Q 017520 151 FLSYVNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD-GFYFANGVALSR 228 (370)
Q Consensus 151 ~~~~~~g~~~~~~~~l~~d~-~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~-~~~~p~gi~~~~ 228 (370)
+... ...+..+.+.+ +++..++.+ .++.|..||.. .....+.. .......+++++
T Consensus 138 ~~~~-----~~~v~~~~~~~~~~~~l~~~~-----------------~d~~i~i~d~~-~~~~~~~~~~~~~i~~~~~~~ 194 (313)
T 3odt_A 138 LQAH-----NASVWDAKVVSFSENKFLTAS-----------------ADKTIKLWQND-KVIKTFSGIHNDVVRHLAVVD 194 (313)
T ss_dssp EECC-----SSCEEEEEEEETTTTEEEEEE-----------------TTSCEEEEETT-EEEEEECSSCSSCEEEEEEEE
T ss_pred cccC-----CCceeEEEEccCCCCEEEEEE-----------------CCCCEEEEecC-ceEEEEeccCcccEEEEEEcC
Confidence 2211 13456677766 676555533 34778888843 23333332 334567889999
Q ss_pred CCCEEEEEeCCc-EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCCEEEEEecCchhHHHhhhcchhHHHHHHhCCcc
Q 017520 229 DEDYVVVCESWK-CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKL 307 (370)
Q Consensus 229 dg~~l~v~~~~~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (370)
++. ++.+...+ |..|++...+ ....+. ...+....++++++|.+..+...+
T Consensus 195 ~~~-~~~~~~dg~i~i~d~~~~~--~~~~~~-~~~~~i~~~~~~~~~~l~~~~~dg------------------------ 246 (313)
T 3odt_A 195 DGH-FISCSNDGLIKLVDMHTGD--VLRTYE-GHESFVYCIKLLPNGDIVSCGEDR------------------------ 246 (313)
T ss_dssp TTE-EEEEETTSEEEEEETTTCC--EEEEEE-CCSSCEEEEEECTTSCEEEEETTS------------------------
T ss_pred CCe-EEEccCCCeEEEEECCchh--hhhhhh-cCCceEEEEEEecCCCEEEEecCC------------------------
Confidence 998 77777766 9999976432 122222 233445678899999877666554
Q ss_pred ccccccCCCceEEEEEC-CCCcEEEEEeCCCCCccccceeEEEE-CCEEEEEeCCCCeEEEEeC
Q 017520 308 FSQFITLGGGAHLIHVA-EDGTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQL 369 (370)
Q Consensus 308 ~~~~~~~~~~g~v~~~~-~~g~~~~~~~~~~g~~~~~~t~~~~~-~g~L~~gs~~~~~i~~~~~ 369 (370)
.+..+| .+++.+..+..+.+ .++.+... ++++..++. ...|..+++
T Consensus 247 -----------~v~iwd~~~~~~~~~~~~~~~----~i~~~~~~~~~~~~~~~~-dg~i~iw~~ 294 (313)
T 3odt_A 247 -----------TVRIWSKENGSLKQVITLPAI----SIWSVDCMSNGDIIVGSS-DNLVRIFSQ 294 (313)
T ss_dssp -----------EEEEECTTTCCEEEEEECSSS----CEEEEEECTTSCEEEEET-TSCEEEEES
T ss_pred -----------EEEEEECCCCceeEEEeccCc----eEEEEEEccCCCEEEEeC-CCcEEEEeC
Confidence 577778 46788887766543 34555544 456555544 345555543
No 217
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=98.31 E-value=0.0006 Score=61.05 Aligned_cols=177 Identities=11% Similarity=0.075 Sum_probs=105.7
Q ss_pred CcceEEcCCCc-EEEEecCCeEEEEe--CCe-EEEEEecCCCceeceEEcCCCcEEEEeCCCc-eEEEc-CCC--eEEEE
Q 017520 81 PEDASMDKNGV-IYTATRDGWIKRLQ--DGT-WVNWKFIDSQTLVGLTSTKEGHLIICDNANG-LHKVS-EDG--VENFL 152 (370)
Q Consensus 81 P~~i~~d~~G~-l~v~~~~g~I~~~~--~g~-~~~~~~~~~~p~~gl~~d~~G~L~v~~~~~g-i~~~~-~~g--~~~~~ 152 (370)
..++++.++|+ |.+++.++.|..|+ +++ ...+....+... ++++.+++.++++....+ |..++ +++ .....
T Consensus 58 v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~ 136 (304)
T 2ynn_A 58 VRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIR-SIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTF 136 (304)
T ss_dssp EEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEE-EEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEE
T ss_pred EEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEE-EEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhh
Confidence 35667777765 55677899999999 555 344544555677 999999998666544444 55555 444 22221
Q ss_pred eecCCcccccccceEEcC-CCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEE-EEecC-CCCccceEEcc-
Q 017520 153 SYVNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITT-LVADG-FYFANGVALSR- 228 (370)
Q Consensus 153 ~~~~g~~~~~~~~l~~d~-~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~-~~~~~-~~~p~gi~~~~- 228 (370)
.+. ...+..++++| ++.+.++.+ .++.|..||..++... .+... ....+.+.+.+
T Consensus 137 ---~~h-~~~v~~v~~~p~~~~~l~sgs-----------------~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~ 195 (304)
T 2ynn_A 137 ---EGH-EHFVMCVAFNPKDPSTFASGC-----------------LDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPL 195 (304)
T ss_dssp ---CCC-CSCEEEEEECTTCTTEEEEEE-----------------TTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCS
T ss_pred ---ccc-CCcEEEEEECCCCCCEEEEEe-----------------CCCeEEEEECCCCCccceeccCCcCcEEEEEEEEc
Confidence 221 13578899998 567666643 3578888887644322 22222 22334566665
Q ss_pred -CCCEEEEEeCCc-EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCCEEEEEec
Q 017520 229 -DEDYVVVCESWK-CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 282 (370)
Q Consensus 229 -dg~~l~v~~~~~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~ 282 (370)
+++.++.+...+ |..||+...+ ....+. ........+++.+++.+.++...
T Consensus 196 ~~~~~l~s~s~D~~i~iWd~~~~~--~~~~~~-~h~~~v~~~~~~p~~~~l~s~s~ 248 (304)
T 2ynn_A 196 PDKPYMITASDDLTIKIWDYQTKS--CVATLE-GHMSNVSFAVFHPTLPIIISGSE 248 (304)
T ss_dssp TTCCEEEEEETTSEEEEEETTTTE--EEEEEE-CCSSCEEEEEECSSSSEEEEEET
T ss_pred CCCCEEEEEcCCCeEEEEeCCCCc--cceeeC-CCCCCEEEEEECCCCCEEEEEcC
Confidence 677677777666 8888876431 122221 22223445778888886665443
No 218
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=98.31 E-value=4.8e-05 Score=68.85 Aligned_cols=222 Identities=12% Similarity=0.024 Sum_probs=128.7
Q ss_pred CCCcceEEcCCCc--EEEEecCCeEEEEe---CCeEEEEEe--cCCCceeceEEcCCCcEEE-EeCCCceEEEc-CC--C
Q 017520 79 NHPEDASMDKNGV--IYTATRDGWIKRLQ---DGTWVNWKF--IDSQTLVGLTSTKEGHLII-CDNANGLHKVS-ED--G 147 (370)
Q Consensus 79 ~~P~~i~~d~~G~--l~v~~~~g~I~~~~---~g~~~~~~~--~~~~p~~gl~~d~~G~L~v-~~~~~gi~~~~-~~--g 147 (370)
....++++.++|. |++++.+|.|..|+ +++...+.. ...... ++++.+ +++++ +...+.|..++ .+ +
T Consensus 57 ~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~v~-~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~ 134 (342)
T 1yfq_A 57 HPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGIC-RICKYG-DDKLIAASWDGLIEVIDPRNYGD 134 (342)
T ss_dssp SCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEECBSCCCCSCEE-EEEEET-TTEEEEEETTSEEEEECHHHHTT
T ss_pred CceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCceEeccccCCCCceE-EEEeCC-CCEEEEEcCCCeEEEEccccccc
Confidence 3567788888887 77788899999997 345555444 445566 899988 76555 44444466666 33 1
Q ss_pred -e-E---EEEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCC-Ce--EEEEe-cCC
Q 017520 148 -V-E---NFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSS-NI--TTLVA-DGF 218 (370)
Q Consensus 148 -~-~---~~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t-~~--~~~~~-~~~ 218 (370)
. . ....... ....+..+++++++ ++++. .++.|..||..+ +. ..... ...
T Consensus 135 ~~~~~~~~~~~~~~--~~~~v~~~~~~~~~-l~~~~------------------~d~~i~i~d~~~~~~~~~~~~~~~~~ 193 (342)
T 1yfq_A 135 GVIAVKNLNSNNTK--VKNKIFTMDTNSSR-LIVGM------------------NNSQVQWFRLPLCEDDNGTIEESGLK 193 (342)
T ss_dssp BCEEEEESCSSSSS--SCCCEEEEEECSSE-EEEEE------------------STTEEEEEESSCCTTCCCEEEECSCS
T ss_pred ccccccCCeeeEEe--eCCceEEEEecCCc-EEEEe------------------CCCeEEEEECCccccccceeeecCCC
Confidence 1 0 0000111 12356788888887 65553 347889999876 32 22222 223
Q ss_pred CCccceEEcc-CCCEEEEEeCCc-EEEEEeCCC--C--CCceeeeccCC--------CCCCCceeECCCCCEEEEEecCc
Q 017520 219 YFANGVALSR-DEDYVVVCESWK-CRKYWLKGE--R--KGKLETFAENL--------PGAPDNINLAPDGTFWIAIIKLD 284 (370)
Q Consensus 219 ~~p~gi~~~~-dg~~l~v~~~~~-l~~~~~~~~--~--~~~~~~~~~~~--------~g~p~~i~~d~~G~lwv~~~~~~ 284 (370)
.....+++++ +++.++++...+ |..|+.+.. . ......+.... .+....++++++|++.++....
T Consensus 194 ~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d- 272 (342)
T 1yfq_A 194 YQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSD- 272 (342)
T ss_dssp SCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETT-
T ss_pred CceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCC-
Confidence 3567899999 999888888777 777776543 0 11122222111 1134567888988744443322
Q ss_pred hhHHHhhhcchhHHHHHHhCCccccccccCCCceEEEEECC-CCcEEEEEeCC-CCCccccceeEEEECCEEEEEeCCC
Q 017520 285 ARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAE-DGTIIRNLVDP-TGQLMSFVTSGLQVDNHLYVISLTS 361 (370)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~-~g~~~~~~~~~-~g~~~~~~t~~~~~~g~L~~gs~~~ 361 (370)
+.|..+|. +++.+..+... .+ .++.+...+..|..++..+
T Consensus 273 ---------------------------------g~i~vwd~~~~~~~~~~~~~h~~----~v~~~~~~~~~l~s~s~Dg 314 (342)
T 1yfq_A 273 ---------------------------------GIISCWNLQTRKKIKNFAKFNED----SVVKIACSDNILCLATSDD 314 (342)
T ss_dssp ---------------------------------SCEEEEETTTTEEEEECCCCSSS----EEEEEEECSSEEEEEEECT
T ss_pred ---------------------------------ceEEEEcCccHhHhhhhhcccCC----CceEecCCCCeEEEEecCC
Confidence 34677774 47777776554 32 3444443335566666554
No 219
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=98.30 E-value=0.00034 Score=64.25 Aligned_cols=175 Identities=15% Similarity=0.132 Sum_probs=111.0
Q ss_pred CcceEEcCCC-cEEEEecCCeEEEEe--CCeE-EEEEecCCCceeceEEcC--CCcEEE-EeCCCceEEEc-CCC--eEE
Q 017520 81 PEDASMDKNG-VIYTATRDGWIKRLQ--DGTW-VNWKFIDSQTLVGLTSTK--EGHLII-CDNANGLHKVS-EDG--VEN 150 (370)
Q Consensus 81 P~~i~~d~~G-~l~v~~~~g~I~~~~--~g~~-~~~~~~~~~p~~gl~~d~--~G~L~v-~~~~~gi~~~~-~~g--~~~ 150 (370)
..++++.+++ .|..++.+|.|..|+ +++. ..+........ .+.+.+ +|++++ +..++.+..++ +++ ...
T Consensus 157 v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~-~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~ 235 (354)
T 2pbi_B 157 LSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVL-CLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQA 235 (354)
T ss_dssp EEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEE-EEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEE
T ss_pred EEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeE-EEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEE
Confidence 3456777766 577778999999999 5653 44444444555 777765 566554 45445566777 566 333
Q ss_pred EEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecC---CCCccceEEc
Q 017520 151 FLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG---FYFANGVALS 227 (370)
Q Consensus 151 ~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~---~~~p~gi~~~ 227 (370)
+ .+. ...++.+++.|+|+.+++.+ .++.|..||..++........ ......++++
T Consensus 236 ~----~~h-~~~v~~v~~~p~~~~l~s~s-----------------~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s 293 (354)
T 2pbi_B 236 F----ETH-ESDVNSVRYYPSGDAFASGS-----------------DDATCRLYDLRADREVAIYSKESIIFGASSVDFS 293 (354)
T ss_dssp E----CCC-SSCEEEEEECTTSSEEEEEE-----------------TTSCEEEEETTTTEEEEEECCTTCCSCEEEEEEC
T ss_pred e----cCC-CCCeEEEEEeCCCCEEEEEe-----------------CCCeEEEEECCCCcEEEEEcCCCcccceeEEEEe
Confidence 3 111 13678899999998777644 357788899876654333322 1234678999
Q ss_pred cCCCEEEEEeCCc-EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCCEEEEEe
Q 017520 228 RDEDYVVVCESWK-CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAII 281 (370)
Q Consensus 228 ~dg~~l~v~~~~~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~ 281 (370)
++++.++.+...+ |..||+.... ....+. ...+....++++++|++.++..
T Consensus 294 ~~g~~l~~g~~d~~i~vwd~~~~~--~~~~l~-~h~~~v~~l~~spdg~~l~sgs 345 (354)
T 2pbi_B 294 LSGRLLFAGYNDYTINVWDVLKGS--RVSILF-GHENRVSTLRVSPDGTAFCSGS 345 (354)
T ss_dssp TTSSEEEEEETTSCEEEEETTTCS--EEEEEC-CCSSCEEEEEECTTSSCEEEEE
T ss_pred CCCCEEEEEECCCcEEEEECCCCc--eEEEEE-CCCCcEEEEEECCCCCEEEEEc
Confidence 9999888877777 9999875431 122222 2333455688899997655543
No 220
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=98.30 E-value=0.00058 Score=73.29 Aligned_cols=180 Identities=14% Similarity=0.100 Sum_probs=114.0
Q ss_pred CCCcceEEcCCCcEE-EEecCCeEEEEe--CCe-EEEEEecCCCceeceEEcCCCcEEEEeCC-CceEEEc-CCC--eEE
Q 017520 79 NHPEDASMDKNGVIY-TATRDGWIKRLQ--DGT-WVNWKFIDSQTLVGLTSTKEGHLIICDNA-NGLHKVS-EDG--VEN 150 (370)
Q Consensus 79 ~~P~~i~~d~~G~l~-v~~~~g~I~~~~--~g~-~~~~~~~~~~p~~gl~~d~~G~L~v~~~~-~gi~~~~-~~g--~~~ 150 (370)
....++++.++|... +++.+|.|..|+ +++ ...+....+... +++++++|++.++... +.|..++ .++ +..
T Consensus 616 ~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~-~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~ 694 (1249)
T 3sfz_A 616 DAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVL-CCAFSSDDSYIATCSADKKVKIWDSATGKLVHT 694 (1249)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEE-EEEECTTSSEEEEEETTSEEEEEETTTCCEEEE
T ss_pred ccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEE-EEEEecCCCEEEEEeCCCeEEEEECCCCceEEE
Confidence 345678899988654 566889999999 554 344444455667 9999999986665444 4466666 566 333
Q ss_pred EEeecCCcccccccceEEcCCC--cEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEec-CCCCccceEEc
Q 017520 151 FLSYVNGSKLRFANDVVEASDG--SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD-GFYFANGVALS 227 (370)
Q Consensus 151 ~~~~~~g~~~~~~~~l~~d~~G--~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~-~~~~p~gi~~~ 227 (370)
+... ...+..+++.+++ .+.++.+ .++.|..||..+++...... .......++++
T Consensus 695 ~~~~-----~~~v~~~~~~~~~~~~~l~sg~-----------------~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~s 752 (1249)
T 3sfz_A 695 YDEH-----SEQVNCCHFTNKSNHLLLATGS-----------------NDFFLKLWDLNQKECRNTMFGHTNSVNHCRFS 752 (1249)
T ss_dssp EECC-----SSCEEEEEECSSSSCCEEEEEE-----------------TTSCEEEEETTSSSEEEEECCCSSCEEEEEEC
T ss_pred EcCC-----CCcEEEEEEecCCCceEEEEEe-----------------CCCeEEEEECCCcchhheecCCCCCEEEEEEe
Confidence 3211 1356788888853 4544432 45789999988776544333 33456789999
Q ss_pred cCCCEEEEEeCCc-EEEEEeCCCCCCceeeec------------cCCCCCCCceeECCCCCEEEEEecC
Q 017520 228 RDEDYVVVCESWK-CRKYWLKGERKGKLETFA------------ENLPGAPDNINLAPDGTFWIAIIKL 283 (370)
Q Consensus 228 ~dg~~l~v~~~~~-l~~~~~~~~~~~~~~~~~------------~~~~g~p~~i~~d~~G~lwv~~~~~ 283 (370)
++++.++.+...+ |..|++..... ...+. .........++++++|...++...+
T Consensus 753 p~~~~l~s~s~dg~v~vwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~ 819 (1249)
T 3sfz_A 753 PDDELLASCSADGTLRLWDVRSANE--RKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKN 819 (1249)
T ss_dssp SSTTEEEEEESSSEEEEEEGGGTEE--EEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETT
T ss_pred cCCCEEEEEECCCeEEEEeCCCCcc--cceecccccccccCCccccccceEEEEEECCCCCEEEEEcCC
Confidence 9999887777777 88888765321 11110 0011134457788999877766544
No 221
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=98.30 E-value=0.002 Score=58.59 Aligned_cols=172 Identities=16% Similarity=0.058 Sum_probs=98.3
Q ss_pred CCCcEEEEecCCeEEEEe--CCe-EEEEE-ecCCCceeceEEcC--CCcEEEE-eCCCceEEEc-CCC-eEEEEeecCCc
Q 017520 88 KNGVIYTATRDGWIKRLQ--DGT-WVNWK-FIDSQTLVGLTSTK--EGHLIIC-DNANGLHKVS-EDG-VENFLSYVNGS 158 (370)
Q Consensus 88 ~~G~l~v~~~~g~I~~~~--~g~-~~~~~-~~~~~p~~gl~~d~--~G~L~v~-~~~~gi~~~~-~~g-~~~~~~~~~g~ 158 (370)
.||.+.+-+.++.+..++ .++ +..+. ...+... ++++++ +|+++++ ..++.+..++ .++ ...... ..
T Consensus 93 ~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~---~~ 168 (343)
T 3lrv_A 93 PCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEII-YMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHS---AK 168 (343)
T ss_dssp STTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEE-EEECCC---CCEEEEEETTCCEEEEESSSSCEEEEEC---CC
T ss_pred CCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEE-EEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEe---cC
Confidence 344444444444444445 333 22222 1223456 899999 8987774 4444566666 556 322211 11
Q ss_pred ccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEE--EEec-CCCCccceEEccCCCEEEE
Q 017520 159 KLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITT--LVAD-GFYFANGVALSRDEDYVVV 235 (370)
Q Consensus 159 ~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~--~~~~-~~~~p~gi~~~~dg~~l~v 235 (370)
....+..++++++|.+.++-+ .++.|..||..+++.. .+.. .......++++++++.+..
T Consensus 169 ~~~~i~~~~~~pdg~~lasg~-----------------~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s 231 (343)
T 3lrv_A 169 SDVEYSSGVLHKDSLLLALYS-----------------PDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVV 231 (343)
T ss_dssp SSCCCCEEEECTTSCEEEEEC-----------------TTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEE
T ss_pred CCCceEEEEECCCCCEEEEEc-----------------CCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEE
Confidence 123478899999998777643 3578999998876643 2322 2345678999999997777
Q ss_pred EeCCcEEEEEeCCCCC-CceeeeccCCCCCCC---ceeECCCCCEEEEEec
Q 017520 236 CESWKCRKYWLKGERK-GKLETFAENLPGAPD---NINLAPDGTFWIAIIK 282 (370)
Q Consensus 236 ~~~~~l~~~~~~~~~~-~~~~~~~~~~~g~p~---~i~~d~~G~lwv~~~~ 282 (370)
+..+.|..||+...+. .....+. ....+- .++++++|++.++...
T Consensus 232 ~~~~~v~iwd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~l~~~s~ 280 (343)
T 3lrv_A 232 ECDQTVVCFDLRKDVGTLAYPTYT--IPEFKTGTVTYDIDDSGKNMIAYSN 280 (343)
T ss_dssp EESSBEEEEETTSSTTCBSSCCCB--C-----CCEEEEECTTSSEEEEEET
T ss_pred EeCCeEEEEEcCCCCcceeecccc--cccccccceEEEECCCCCEEEEecC
Confidence 7743499999865421 1111111 011222 3889999987776543
No 222
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=98.29 E-value=0.00027 Score=64.23 Aligned_cols=149 Identities=9% Similarity=-0.024 Sum_probs=90.7
Q ss_pred CCcceEEcCC----C-cEEEEecCCeEEEEe--CCeE-EEEEecCCCceeceEEcC-CCcEEEEeC-CCceEEEc-CCC-
Q 017520 80 HPEDASMDKN----G-VIYTATRDGWIKRLQ--DGTW-VNWKFIDSQTLVGLTSTK-EGHLIICDN-ANGLHKVS-EDG- 147 (370)
Q Consensus 80 ~P~~i~~d~~----G-~l~v~~~~g~I~~~~--~g~~-~~~~~~~~~p~~gl~~d~-~G~L~v~~~-~~gi~~~~-~~g- 147 (370)
...++++.++ | .|++++.+|.|..|+ +++. ..+........ ++++.+ +++++++.. ++.|..++ .++
T Consensus 71 ~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 149 (366)
T 3k26_A 71 NFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAIN-ELKFHPRDPNLLLSVSKDHALRLWNIQTDT 149 (366)
T ss_dssp CEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEE-EEEECSSCTTEEEEEETTSCEEEEETTTTE
T ss_pred cEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEE-EEEECCCCCCEEEEEeCCCeEEEEEeecCe
Confidence 3566777766 3 366777999999999 5554 33433455567 999998 787655543 44566677 556
Q ss_pred eEEEEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEe------------
Q 017520 148 VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA------------ 215 (370)
Q Consensus 148 ~~~~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~------------ 215 (370)
.........+ ....+..++++++|+..++.. .++.|..||..+++.....
T Consensus 150 ~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~-----------------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~ 211 (366)
T 3k26_A 150 LVAIFGGVEG-HRDEVLSADYDLLGEKIMSCG-----------------MDHSLKLWRINSKRMMNAIKESYDYNPNKTN 211 (366)
T ss_dssp EEEEECSTTS-CSSCEEEEEECTTSSEEEEEE-----------------TTSCEEEEESCSHHHHHHHHHHHTCCGGGCS
T ss_pred EEEEeccccc-ccCceeEEEECCCCCEEEEec-----------------CCCCEEEEECCCCccccccceeEEecCCCCc
Confidence 2222211111 124678899999997666643 3467888887654321100
Q ss_pred -----------------cCCCCccceEEccCCCEEEEEeCCc-EEEEEeCCC
Q 017520 216 -----------------DGFYFANGVALSRDEDYVVVCESWK-CRKYWLKGE 249 (370)
Q Consensus 216 -----------------~~~~~p~gi~~~~dg~~l~v~~~~~-l~~~~~~~~ 249 (370)
........++++ ++.++.+...+ |..|++...
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~ 261 (366)
T 3k26_A 212 RPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKM 261 (366)
T ss_dssp SCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESST
T ss_pred ccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCc
Confidence 012234567776 66666666666 888988654
No 223
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=98.26 E-value=7.1e-05 Score=69.30 Aligned_cols=150 Identities=13% Similarity=0.155 Sum_probs=95.7
Q ss_pred CCcceEEcCCCcEEEEecCCeEEEEe--CCeEEEEEe---cCCCceeceEEcCCCcEEEEeC-CC--c--eEEEc-CCC-
Q 017520 80 HPEDASMDKNGVIYTATRDGWIKRLQ--DGTWVNWKF---IDSQTLVGLTSTKEGHLIICDN-AN--G--LHKVS-EDG- 147 (370)
Q Consensus 80 ~P~~i~~d~~G~l~v~~~~g~I~~~~--~g~~~~~~~---~~~~p~~gl~~d~~G~L~v~~~-~~--g--i~~~~-~~g- 147 (370)
...+|++.+||.+.+...++.+.+++ +++...... ...... ++++.++|..+++.. .. + +..++ ..+
T Consensus 178 ~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~ 256 (365)
T 4h5i_A 178 EVKDLHFSTDGKVVAYITGSSLEVISTVTGSCIARKTDFDKNWSLS-KINFIADDTVLIAASLKKGKGIVLTKISIKSGN 256 (365)
T ss_dssp CCCEEEECTTSSEEEEECSSCEEEEETTTCCEEEEECCCCTTEEEE-EEEEEETTEEEEEEEESSSCCEEEEEEEEETTE
T ss_pred ceEEEEEccCCceEEeccceeEEEEEeccCcceeeeecCCCCCCEE-EEEEcCCCCEEEEEecCCcceeEEeecccccce
Confidence 46789999999887766677788888 554332211 122345 899999998666432 22 2 33344 333
Q ss_pred eEEEE-eecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEE-EecC-CCCccce
Q 017520 148 VENFL-SYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTL-VADG-FYFANGV 224 (370)
Q Consensus 148 ~~~~~-~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~-~~~~-~~~p~gi 224 (370)
..... ....+ ....+..++++|||++.++-+ .++.|..||.++++... +..+ ......+
T Consensus 257 ~~~~~~~~~~~-~~~~V~~~~~Spdg~~lasgs-----------------~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v 318 (365)
T 4h5i_A 257 TSVLRSKQVTN-RFKGITSMDVDMKGELAVLAS-----------------NDNSIALVKLKDLSMSKIFKQAHSFAITEV 318 (365)
T ss_dssp EEEEEEEEEES-SCSCEEEEEECTTSCEEEEEE-----------------TTSCEEEEETTTTEEEEEETTSSSSCEEEE
T ss_pred ecceeeeeecC-CCCCeEeEEECCCCCceEEEc-----------------CCCEEEEEECCCCcEEEEecCcccCCEEEE
Confidence 22111 11111 123578899999998776643 35789999998877543 3333 3346789
Q ss_pred EEccCCCEEEEEeCCc-EEEEEeCC
Q 017520 225 ALSRDEDYVVVCESWK-CRKYWLKG 248 (370)
Q Consensus 225 ~~~~dg~~l~v~~~~~-l~~~~~~~ 248 (370)
+|+|||+.|.-+...+ |..|++..
T Consensus 319 ~fSpdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 319 TISPDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp EECTTSCEEEEEETTSEEEEEECCT
T ss_pred EECCCCCEEEEEeCCCeEEEEEcCC
Confidence 9999999777666666 88888754
No 224
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.26 E-value=0.00013 Score=72.76 Aligned_cols=176 Identities=10% Similarity=-0.033 Sum_probs=100.9
Q ss_pred CCCc--EEEEe-cCCeEEEEe-C----CeEEEEEe-----cCCCceeceEEcCCCc-EEEEeCC----------CceEEE
Q 017520 88 KNGV--IYTAT-RDGWIKRLQ-D----GTWVNWKF-----IDSQTLVGLTSTKEGH-LIICDNA----------NGLHKV 143 (370)
Q Consensus 88 ~~G~--l~v~~-~~g~I~~~~-~----g~~~~~~~-----~~~~p~~gl~~d~~G~-L~v~~~~----------~gi~~~ 143 (370)
+||. |+++. .+.+|+.++ + ++...+.. ...... ++++++||+ |+.+... ..|+.+
T Consensus 88 PDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~-~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~ 166 (662)
T 3azo_A 88 PAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWA-DPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAV 166 (662)
T ss_dssp SSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEE-EEEEETTTTEEEEEEEEECSSSTTCEEEEEEEE
T ss_pred cCCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCcccc-CcEECCCCCEEEEEEecccCCCCCCceeEEEEE
Confidence 6774 45554 467899998 7 55555543 223456 889999997 5444332 257778
Q ss_pred c-CC------C-eEEEEeecCCcccccccceEEcCCCc-EEEEeCCCCCCCccceecccccCCCceEEEEeCC-CC---e
Q 017520 144 S-ED------G-VENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPS-SN---I 210 (370)
Q Consensus 144 ~-~~------g-~~~~~~~~~g~~~~~~~~l~~d~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~-t~---~ 210 (370)
+ .+ + .+.+.. .+ ......++++|||+ |+++..... .. .-....|+.+|.+ ++ +
T Consensus 167 ~~~~~~~~~~~~~~~l~~--~~--~~~~~~~~~SpDG~~la~~~~~~~--~~--------~~~~~~i~~~d~~~~g~~~~ 232 (662)
T 3azo_A 167 PLDGSAAADRSAVRELSD--DA--HRFVTGPRLSPDGRQAVWLAWDHP--RM--------PWEGTELKTARVTEDGRFAD 232 (662)
T ss_dssp ETTSTTTTCGGGSEESSC--SC--SSEECCCEECTTSSEEEEEEECTT--CC--------TTTCEEEEEEEECTTSCEEE
T ss_pred ECCCCccccCCceeEEEe--cC--CCcccCceECCCCCEEEEEECCCC--CC--------CCCCcEEEEEEECCCCcccc
Confidence 7 55 6 444320 11 13456789999996 555542100 00 0012479999987 46 5
Q ss_pred EEEEecC-CCCccceEEccCCCEEEEEeCCc---EEEEEeCCCCCCceeeeccCCCCC--------CCceeECCCCCEEE
Q 017520 211 TTLVADG-FYFANGVALSRDEDYVVVCESWK---CRKYWLKGERKGKLETFAENLPGA--------PDNINLAPDGTFWI 278 (370)
Q Consensus 211 ~~~~~~~-~~~p~gi~~~~dg~~l~v~~~~~---l~~~~~~~~~~~~~~~~~~~~~g~--------p~~i~~d~~G~lwv 278 (370)
.+.+..+ ......+++++||+.++.++..+ |+++++++. +.+.+....... ...+++.++|.+++
T Consensus 233 ~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~---~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~ 309 (662)
T 3azo_A 233 TRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATG---AATQLCRREEEFAGPLWTPGMRWFAPLANGLIAV 309 (662)
T ss_dssp EEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTC---CEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEE
T ss_pred cEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCC---ceeecccccccccCccccccCceEeEeCCCEEEE
Confidence 5555443 34567789999999555555444 888876443 222222111000 23567777888776
Q ss_pred EEe
Q 017520 279 AII 281 (370)
Q Consensus 279 ~~~ 281 (370)
...
T Consensus 310 ~~~ 312 (662)
T 3azo_A 310 VHG 312 (662)
T ss_dssp EEB
T ss_pred EEE
Confidence 654
No 225
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=98.25 E-value=0.00048 Score=61.71 Aligned_cols=179 Identities=16% Similarity=0.104 Sum_probs=100.2
Q ss_pred CCCcCCCcceEEcCCCc-EEEEecCCeEEEEe--CCe-----EEEEEecCCCceeceEEcC--CCcEEEEeCCCc-eEEE
Q 017520 75 EGSVNHPEDASMDKNGV-IYTATRDGWIKRLQ--DGT-----WVNWKFIDSQTLVGLTSTK--EGHLIICDNANG-LHKV 143 (370)
Q Consensus 75 ~~~~~~P~~i~~d~~G~-l~v~~~~g~I~~~~--~g~-----~~~~~~~~~~p~~gl~~d~--~G~L~v~~~~~g-i~~~ 143 (370)
.+.-....+++++++|. |.+++.+|.|..|+ ++. ...+........ ++++.+ +++++++....| |..+
T Consensus 8 ~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~d~~~l~s~~~dg~v~vw 86 (351)
T 3f3f_A 8 SGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIV-AIDWASPEYGRIIASASYDKTVKLW 86 (351)
T ss_dssp CCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEE-EEEECCGGGCSEEEEEETTSCEEEE
T ss_pred cccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEE-EEEEcCCCCCCEEEEEcCCCeEEEE
Confidence 34334567889998886 55667899999998 331 222333445566 899987 577655443444 5555
Q ss_pred c-CCC-e-------EEEEeecCCcccccccceEEcCC--CcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEE
Q 017520 144 S-EDG-V-------ENFLSYVNGSKLRFANDVVEASD--GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITT 212 (370)
Q Consensus 144 ~-~~g-~-------~~~~~~~~g~~~~~~~~l~~d~~--G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~ 212 (370)
+ .++ . +.+.. ..+. ...+..+++.++ |++.++.+ .++.|..||..+++..
T Consensus 87 d~~~~~~~~~~~~~~~~~~-~~~~-~~~v~~~~~~~~~~~~~l~~~~-----------------~dg~v~iwd~~~~~~~ 147 (351)
T 3f3f_A 87 EEDPDQEECSGRRWNKLCT-LNDS-KGSLYSVKFAPAHLGLKLACLG-----------------NDGILRLYDALEPSDL 147 (351)
T ss_dssp EECTTSCTTSSCSEEEEEE-ECCC-SSCEEEEEECCGGGCSEEEEEE-----------------TTCEEEEEECSSTTCT
T ss_pred ecCCCcccccccCcceeee-eccc-CCceeEEEEcCCCCCcEEEEec-----------------CCCcEEEecCCChHHh
Confidence 5 332 1 22221 1211 235778999998 87666533 3477888887654321
Q ss_pred E------Ee--------cCCCCccceEEccC---CCEEEEEeCCc-EEEEEeCCCCCCceeeeccCCCCCCCceeECCCC
Q 017520 213 L------VA--------DGFYFANGVALSRD---EDYVVVCESWK-CRKYWLKGERKGKLETFAENLPGAPDNINLAPDG 274 (370)
Q Consensus 213 ~------~~--------~~~~~p~gi~~~~d---g~~l~v~~~~~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G 274 (370)
. .. ........++++++ ++.++++...+ +..++....+......+ ....+....++++++|
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~i~~~~~~p~~ 226 (351)
T 3f3f_A 148 RSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKL-PGHKSLIRSISWAPSI 226 (351)
T ss_dssp TCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEEC-CCCCSCEEEEEECCCS
T ss_pred ccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeec-CCCCcceeEEEECCCC
Confidence 0 00 12234467888887 88777777777 53333322211111111 1222334567788887
No 226
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=98.25 E-value=0.00018 Score=67.16 Aligned_cols=180 Identities=16% Similarity=0.092 Sum_probs=111.2
Q ss_pred CCCcceEEcCCC--cEEEEecCCeEEEEe--CCeEEEEE---ecCCCceeceEEcCCCcEEE-EeCCCceEEEc-CCC--
Q 017520 79 NHPEDASMDKNG--VIYTATRDGWIKRLQ--DGTWVNWK---FIDSQTLVGLTSTKEGHLII-CDNANGLHKVS-EDG-- 147 (370)
Q Consensus 79 ~~P~~i~~d~~G--~l~v~~~~g~I~~~~--~g~~~~~~---~~~~~p~~gl~~d~~G~L~v-~~~~~gi~~~~-~~g-- 147 (370)
....++++.++| .++.++.+|.|..|+ +++..... ...+... +++++++|++++ +..++.|..++ +++
T Consensus 132 ~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 210 (402)
T 2aq5_A 132 KRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIY-SVDWSRDGALICTSCRDKRVRVIEPRKGTV 210 (402)
T ss_dssp SCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEE-EEEECTTSSCEEEEETTSEEEEEETTTTEE
T ss_pred CeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceE-EEEECCCCCEEEEEecCCcEEEEeCCCCce
Confidence 345678888887 355667899999999 56543332 2344566 899999997554 44444566677 566
Q ss_pred eEEEEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeE--EEE-ecCCCCccce
Q 017520 148 VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNIT--TLV-ADGFYFANGV 224 (370)
Q Consensus 148 ~~~~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~--~~~-~~~~~~p~gi 224 (370)
...+... .....+..+++.++|+++++..+ ...++.|..||..+... ... .........+
T Consensus 211 ~~~~~~~---~~~~~~~~~~~~~~~~~l~~g~~--------------~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~ 273 (402)
T 2aq5_A 211 VAEKDRP---HEGTRPVHAVFVSEGKILTTGFS--------------RMSERQVALWDTKHLEEPLSLQELDTSSGVLLP 273 (402)
T ss_dssp EEEEECS---SCSSSCCEEEECSTTEEEEEEEC--------------TTCCEEEEEEETTBCSSCSEEEECCCCSSCEEE
T ss_pred eeeeccC---CCCCcceEEEEcCCCcEEEEecc--------------CCCCceEEEEcCccccCCceEEeccCCCceeEE
Confidence 3332111 11123678899999987766410 01357899999876432 121 2333456788
Q ss_pred EEccCCCEEEEEeC-Cc-EEEEEeCCCC--CCceeeeccCCCCCCCceeECCCCCEEE
Q 017520 225 ALSRDEDYVVVCES-WK-CRKYWLKGER--KGKLETFAENLPGAPDNINLAPDGTFWI 278 (370)
Q Consensus 225 ~~~~dg~~l~v~~~-~~-l~~~~~~~~~--~~~~~~~~~~~~g~p~~i~~d~~G~lwv 278 (370)
+++++++.++++.. .+ |..|++...+ ......+ ...+....+++.++|.+.+
T Consensus 274 ~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~--~~~~~v~~~~~sp~~~~~~ 329 (402)
T 2aq5_A 274 FFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMF--SSKESQRGMGYMPKRGLEV 329 (402)
T ss_dssp EEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEE--CCSSCCSEEEECCGGGSCG
T ss_pred EEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeeccc--ccCCcccceEEecccccce
Confidence 99999998888775 44 9999987643 1112222 1223466788888775533
No 227
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=98.24 E-value=0.0011 Score=65.66 Aligned_cols=178 Identities=14% Similarity=0.099 Sum_probs=109.5
Q ss_pred CCcceEEcCCCcEE-EEecCCeEEEEe--CCe--E-EEEEecCCCceeceEEcCCCcEEEEeCCC----ceEEEcCCC--
Q 017520 80 HPEDASMDKNGVIY-TATRDGWIKRLQ--DGT--W-VNWKFIDSQTLVGLTSTKEGHLIICDNAN----GLHKVSEDG-- 147 (370)
Q Consensus 80 ~P~~i~~d~~G~l~-v~~~~g~I~~~~--~g~--~-~~~~~~~~~p~~gl~~d~~G~L~v~~~~~----gi~~~~~~g-- 147 (370)
.-.++++.++|.+. .++.+|.|..|+ +++ . ..+....+... +++++++|...++.... +.+++...|
T Consensus 61 ~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~-~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~~ 139 (611)
T 1nr0_A 61 QTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVK-DISWDSESKRIAAVGEGRERFGHVFLFDTGTS 139 (611)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEE-EEEECTTSCEEEEEECCSSCSEEEEETTTCCB
T ss_pred ceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceE-EEEECCCCCEEEEEECCCCceeEEEEeeCCCC
Confidence 45678999999644 566899999998 332 2 23333445567 99999999866643321 233333334
Q ss_pred eEEEEeecCCcccccccceEEcCCCc-EEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecC-CCCccceE
Q 017520 148 VENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG-FYFANGVA 225 (370)
Q Consensus 148 ~~~~~~~~~g~~~~~~~~l~~d~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~-~~~p~gi~ 225 (370)
...+ .+. ...++.+++.|++. ..++.+ .++.|..||..+++......+ ....+.++
T Consensus 140 ~~~l----~gh-~~~v~~v~f~p~~~~~l~s~s-----------------~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~ 197 (611)
T 1nr0_A 140 NGNL----TGQ-ARAMNSVDFKPSRPFRIISGS-----------------DDNTVAIFEGPPFKFKSTFGEHTKFVHSVR 197 (611)
T ss_dssp CBCC----CCC-SSCEEEEEECSSSSCEEEEEE-----------------TTSCEEEEETTTBEEEEEECCCSSCEEEEE
T ss_pred ccee----cCC-CCCceEEEECCCCCeEEEEEe-----------------CCCeEEEEECCCCeEeeeeccccCceEEEE
Confidence 2221 221 24678899999986 344433 357788888776655433333 34567899
Q ss_pred EccCCCEEEEEeCCc-EEEEEeCCCCCCceeeecc------CCCCCCCceeECCCCCEEEEEec
Q 017520 226 LSRDEDYVVVCESWK-CRKYWLKGERKGKLETFAE------NLPGAPDNINLAPDGTFWIAIIK 282 (370)
Q Consensus 226 ~~~dg~~l~v~~~~~-l~~~~~~~~~~~~~~~~~~------~~~g~p~~i~~d~~G~lwv~~~~ 282 (370)
++|||+.+..+...+ |..|+....+. ...+.. ...+....++++++|.+.++...
T Consensus 198 fspdg~~las~s~D~~i~lwd~~~g~~--~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~ 259 (611)
T 1nr0_A 198 YNPDGSLFASTGGDGTIVLYNGVDGTK--TGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASA 259 (611)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTCCE--EEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEET
T ss_pred ECCCCCEEEEEECCCcEEEEECCCCcE--eeeeccccccccccCCCEEEEEECCCCCEEEEEeC
Confidence 999999777677666 88888654311 111211 12233556888999987666543
No 228
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=98.24 E-value=0.00012 Score=73.83 Aligned_cols=196 Identities=10% Similarity=0.002 Sum_probs=104.4
Q ss_pred CCcceEEcCCCc-EEEEec---------CCeEEEEe--CCeEEEEEecCC---CceeceEEcCCCcEEEEeCCCceEEEc
Q 017520 80 HPEDASMDKNGV-IYTATR---------DGWIKRLQ--DGTWVNWKFIDS---QTLVGLTSTKEGHLIICDNANGLHKVS 144 (370)
Q Consensus 80 ~P~~i~~d~~G~-l~v~~~---------~g~I~~~~--~g~~~~~~~~~~---~p~~gl~~d~~G~L~v~~~~~gi~~~~ 144 (370)
...++++++||+ |.++.. ++.|+.++ +++.+.+....+ .+. .++++|||+..+......|+.++
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~-~~~~SPdG~~la~~~~~~i~~~~ 140 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQ-YAGWGPKGQQLIFIFENNIYYCA 140 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCS-BCCBCSSTTCEEEEETTEEEEES
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCcccccccc-ccEECCCCCEEEEEECCeEEEEE
Confidence 377899999997 444443 26788888 566544433222 255 78899999643333345788888
Q ss_pred -CCC-eEEEEee-cCCc-------------ccccccceEEcCCCc-EEEEeCCCCCCCcccee------------ccc--
Q 017520 145 -EDG-VENFLSY-VNGS-------------KLRFANDVVEASDGS-LYFTVSSSKYLPHEYCL------------DIL-- 193 (370)
Q Consensus 145 -~~g-~~~~~~~-~~g~-------------~~~~~~~l~~d~~G~-l~v~d~~~~~~~~~~~~------------~~~-- 193 (370)
.+| ...+... ..+. -+..+..++++|||+ |.++.... -....+.. .+.
T Consensus 141 ~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (723)
T 1xfd_A 141 HVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAIND-SRVPIMELPTYTGSIYPTVKPYHYP 219 (723)
T ss_dssp SSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEEC-TTSCEEEECCCSSSSSCCCEEEECC
T ss_pred CCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECC-CccceEEeeccCCcCCCcceeccCC
Confidence 556 4443321 1110 011336789999996 55543110 00000000 000
Q ss_pred ---ccCCCceEEEEeCCCCeE-EEEecC------CCCccceEEccCCCEEEEE-eCC---c-EEEEEeCCCCCCceeeec
Q 017520 194 ---EGKPHGQLLKYDPSSNIT-TLVADG------FYFANGVALSRDEDYVVVC-ESW---K-CRKYWLKGERKGKLETFA 258 (370)
Q Consensus 194 ---~~~~~g~l~~~d~~t~~~-~~~~~~------~~~p~gi~~~~dg~~l~v~-~~~---~-l~~~~~~~~~~~~~~~~~ 258 (370)
.......|+.+|.++++. ..+... ......++++|||+.++.. +.. . |+.+|+++.+. ...+.
T Consensus 220 ~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~--~~~~~ 297 (723)
T 1xfd_A 220 KAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVC--TKKHE 297 (723)
T ss_dssp BTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCE--EEEEE
T ss_pred CCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcc--eEEEE
Confidence 001123789999887764 333221 1223468999999966444 322 2 88888765422 11111
Q ss_pred cCCCCC----CCceeECCCCC-EEEE
Q 017520 259 ENLPGA----PDNINLAPDGT-FWIA 279 (370)
Q Consensus 259 ~~~~g~----p~~i~~d~~G~-lwv~ 279 (370)
....+. +..+++++||+ +++.
T Consensus 298 ~~~~~~~~~~~~~~~~spdg~~l~~~ 323 (723)
T 1xfd_A 298 DESEAWLHRQNEEPVFSKDGRKFFFI 323 (723)
T ss_dssp EECSSCCCCCCCCCEECTTSCSEEEE
T ss_pred eccCCEEeccCCCceEcCCCCeEEEE
Confidence 111121 24688899997 4443
No 229
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=98.22 E-value=0.0011 Score=62.20 Aligned_cols=185 Identities=9% Similarity=0.080 Sum_probs=106.7
Q ss_pred CCcceEEcCCCcE-EEEecCCeEEEEe--CCe------------EEEEEecC------------CCceeceEEcCCC--c
Q 017520 80 HPEDASMDKNGVI-YTATRDGWIKRLQ--DGT------------WVNWKFID------------SQTLVGLTSTKEG--H 130 (370)
Q Consensus 80 ~P~~i~~d~~G~l-~v~~~~g~I~~~~--~g~------------~~~~~~~~------------~~p~~gl~~d~~G--~ 130 (370)
...+++++++|.+ .+|+.+|.|..|+ +++ ...+.... .... ++++.+++ .
T Consensus 30 ~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~-~l~~~~~~~~~ 108 (447)
T 3dw8_B 30 IISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKIN-KIRWLPQKNAA 108 (447)
T ss_dssp SEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCC-EEEECCCCSSS
T ss_pred cEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceE-EEEEcCCCCcc
Confidence 4567888988864 4666899999998 333 22333333 4466 89999987 4
Q ss_pred EEE-EeCCCceEEEc-CCC-eEEE------------------------------------EeecCCcccccccceEEcCC
Q 017520 131 LII-CDNANGLHKVS-EDG-VENF------------------------------------LSYVNGSKLRFANDVVEASD 171 (370)
Q Consensus 131 L~v-~~~~~gi~~~~-~~g-~~~~------------------------------------~~~~~g~~~~~~~~l~~d~~ 171 (370)
.++ +..++.|..++ .++ .... ...........+..+++.++
T Consensus 109 ~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 188 (447)
T 3dw8_B 109 QFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSD 188 (447)
T ss_dssp EEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTT
T ss_pred eEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCC
Confidence 444 44334444444 332 1100 00000111235778999999
Q ss_pred CcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCC-eEEEEe--------cCCCCccceEEccCC-CEEEEEeCCc-
Q 017520 172 GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSN-ITTLVA--------DGFYFANGVALSRDE-DYVVVCESWK- 240 (370)
Q Consensus 172 G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~-~~~~~~--------~~~~~p~gi~~~~dg-~~l~v~~~~~- 240 (370)
|+++++. .++.|..||..+. +..... ........+++++++ +.++.+...+
T Consensus 189 ~~~l~s~------------------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~ 250 (447)
T 3dw8_B 189 YETYLSA------------------DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGT 250 (447)
T ss_dssp SSEEEEE------------------CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSC
T ss_pred CCEEEEe------------------CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCe
Confidence 9877773 2478888988732 222111 112335789999998 8777777777
Q ss_pred EEEEEeCCCCCCc--eeeeccCCC-----------CCCCceeECCCCCEEEEEecC
Q 017520 241 CRKYWLKGERKGK--LETFAENLP-----------GAPDNINLAPDGTFWIAIIKL 283 (370)
Q Consensus 241 l~~~~~~~~~~~~--~~~~~~~~~-----------g~p~~i~~d~~G~lwv~~~~~ 283 (370)
|..||+...+... ...+..... +....++++++|++.++...+
T Consensus 251 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~ 306 (447)
T 3dw8_B 251 IRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDYL 306 (447)
T ss_dssp EEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEESS
T ss_pred EEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeCC
Confidence 9999986543210 222321110 134568889999877765443
No 230
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=98.22 E-value=0.00026 Score=71.99 Aligned_cols=248 Identities=14% Similarity=0.026 Sum_probs=128.2
Q ss_pred ceEEcCCCc-EEEEecC---------CeEEEEe--CCeEEEEEecCCCceeceEEcCCCcEEEEeCCCceEEEc-CCC-e
Q 017520 83 DASMDKNGV-IYTATRD---------GWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGHLIICDNANGLHKVS-EDG-V 148 (370)
Q Consensus 83 ~i~~d~~G~-l~v~~~~---------g~I~~~~--~g~~~~~~~~~~~p~~gl~~d~~G~L~v~~~~~gi~~~~-~~g-~ 148 (370)
++.+.+||+ |.+++.+ +.++.++ +|+.+.+....+... ..+++|||+..+......|+.++ .+| .
T Consensus 66 ~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~~~~~~~~-~~~~SPdG~~la~~~~~~i~~~~~~~~~~ 144 (740)
T 4a5s_A 66 DYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNNTQ-WVTWSPVGHKLAYVWNNDIYVKIEPNLPS 144 (740)
T ss_dssp EEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCTTEE-EEEECSSTTCEEEEETTEEEEESSTTSCC
T ss_pred ceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEEcccCCCcce-eeEECCCCCEEEEEECCeEEEEECCCCce
Confidence 367889996 4555432 5677788 566554433334445 78899999633333346788888 555 4
Q ss_pred EEEEee-cC-----Ccc--------cccccceEEcCCCc-EEEEeCCCCCCCccceec----------------c-c--c
Q 017520 149 ENFLSY-VN-----GSK--------LRFANDVVEASDGS-LYFTVSSSKYLPHEYCLD----------------I-L--E 194 (370)
Q Consensus 149 ~~~~~~-~~-----g~~--------~~~~~~l~~d~~G~-l~v~d~~~~~~~~~~~~~----------------~-~--~ 194 (370)
+.+... .. |.+ +.....++++|||+ |.+.... .-....+... . . +
T Consensus 145 ~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d-~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~ 223 (740)
T 4a5s_A 145 YRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFN-DTEVPLIEYSFYSDESLQYPKTVRVPYPKAGA 223 (740)
T ss_dssp EECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEE-CTTCCEEEEEECCSTTCSSCEEEEEECCBTTS
T ss_pred EEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEc-ccCCceEEEEeecCCCCCCCcceeecCCCCcC
Confidence 433211 00 100 12234588999996 5544210 0001111000 0 0 0
Q ss_pred cCCCceEEEEeCCC---C---eEEEEec------CCCCccceEEccCCCEEE-EEeCCc----EEEEEeCCCC----CCc
Q 017520 195 GKPHGQLLKYDPSS---N---ITTLVAD------GFYFANGVALSRDEDYVV-VCESWK----CRKYWLKGER----KGK 253 (370)
Q Consensus 195 ~~~~g~l~~~d~~t---~---~~~~~~~------~~~~p~gi~~~~dg~~l~-v~~~~~----l~~~~~~~~~----~~~ 253 (370)
......|+.+|.++ + +...+.. .......++++|||+.++ +..... |+.+++++.+ ...
T Consensus 224 ~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~ 303 (740)
T 4a5s_A 224 VNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLV 303 (740)
T ss_dssp CCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECG
T ss_pred cCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeE
Confidence 11223688999987 6 4444432 222345678999998443 333332 8888887643 011
Q ss_pred eeee-ccCCCCC-----CCceeECCCCCEE---EEEecCchhHHHhhhcchhHHHHHHhCCccccccccCCCceEEEEEC
Q 017520 254 LETF-AENLPGA-----PDNINLAPDGTFW---IAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVA 324 (370)
Q Consensus 254 ~~~~-~~~~~g~-----p~~i~~d~~G~lw---v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~ 324 (370)
...+ .+...+. +....+++||..+ .+...+ +..|+.+|
T Consensus 304 ~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G---------------------------------~~~l~~~~ 350 (740)
T 4a5s_A 304 ARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEG---------------------------------YRHICYFQ 350 (740)
T ss_dssp GGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTS---------------------------------CEEEEEEE
T ss_pred EEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCC---------------------------------ceEEEEEE
Confidence 1111 1111111 3467889999732 222222 35688888
Q ss_pred CCCcEEEEEeCCCCCccccceeEE-EECCEEEEEeCC------CCeEEEEeC
Q 017520 325 EDGTIIRNLVDPTGQLMSFVTSGL-QVDNHLYVISLT------SNFIGKVQL 369 (370)
Q Consensus 325 ~~g~~~~~~~~~~g~~~~~~t~~~-~~~g~L~~gs~~------~~~i~~~~~ 369 (370)
.+|+....++.... .+..+. .+++.||+.+.. ...|.++++
T Consensus 351 ~~~~~~~~lT~g~~----~v~~~~~~d~~~i~f~~~~~~~~~~~~~ly~v~~ 398 (740)
T 4a5s_A 351 IDKKDCTFITKGTW----EVIGIEALTSDYLYYISNEYKGMPGGRNLYKIQL 398 (740)
T ss_dssp TTCSSCEESCCSSS----CEEEEEEECSSEEEEEESCGGGCTTCBEEEEEET
T ss_pred CCCCceEecccCCE----EEEEEEEEeCCEEEEEEecCCCCCceeEEEEEEC
Confidence 87776665554221 222222 336778877654 235666554
No 231
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=98.21 E-value=0.00086 Score=63.01 Aligned_cols=151 Identities=11% Similarity=0.123 Sum_probs=92.2
Q ss_pred CCCcceEEcC-CCc-EEEEecCCeEEEEe--C---Ce----EEEEEecCCCceeceEEcCCCcEEEEeCCCc-eEEEc-C
Q 017520 79 NHPEDASMDK-NGV-IYTATRDGWIKRLQ--D---GT----WVNWKFIDSQTLVGLTSTKEGHLIICDNANG-LHKVS-E 145 (370)
Q Consensus 79 ~~P~~i~~d~-~G~-l~v~~~~g~I~~~~--~---g~----~~~~~~~~~~p~~gl~~d~~G~L~v~~~~~g-i~~~~-~ 145 (370)
....++++.+ +|. |..++.+|.|..|+ + +. ...+ ...+... ++++.++++++++....| |..++ .
T Consensus 64 ~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~-~~~~~~~~~~l~s~s~dg~i~vwd~~ 141 (437)
T 3gre_A 64 NSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVT-QITMIPNFDAFAVSSKDGQIIVLKVN 141 (437)
T ss_dssp SCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEE-EEEECTTSSEEEEEETTSEEEEEEEE
T ss_pred CceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEE-EEEEeCCCCEEEEEeCCCEEEEEEec
Confidence 4567889998 875 45566899999998 3 32 1222 3445567 999999887655444444 44443 2
Q ss_pred ---CC--eEEEEee----cCCc---ccccccceE--EcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeE
Q 017520 146 ---DG--VENFLSY----VNGS---KLRFANDVV--EASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNIT 211 (370)
Q Consensus 146 ---~g--~~~~~~~----~~g~---~~~~~~~l~--~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~ 211 (370)
++ ....... ..-. ....+..+. ..+++.+.++.+ .++.|..||..+++.
T Consensus 142 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----------------~d~~i~iwd~~~~~~ 204 (437)
T 3gre_A 142 HYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALT-----------------NLSRVIIFDIRTLER 204 (437)
T ss_dssp EEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEE-----------------TTSEEEEEETTTCCE
T ss_pred cccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEe-----------------CCCeEEEEeCCCCee
Confidence 34 2211110 0000 011233333 446676555533 357899999887765
Q ss_pred EEEecC---CCCccceEEccCCCEEEEEeCCc-EEEEEeCC
Q 017520 212 TLVADG---FYFANGVALSRDEDYVVVCESWK-CRKYWLKG 248 (370)
Q Consensus 212 ~~~~~~---~~~p~gi~~~~dg~~l~v~~~~~-l~~~~~~~ 248 (370)
...... ......++++++++.++.+...+ |..||+..
T Consensus 205 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 245 (437)
T 3gre_A 205 LQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRF 245 (437)
T ss_dssp EEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTT
T ss_pred eEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCC
Confidence 443332 34567899999999888888777 99999764
No 232
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=98.19 E-value=0.00088 Score=65.26 Aligned_cols=180 Identities=9% Similarity=-0.042 Sum_probs=101.9
Q ss_pred CCCcceEEcCCCcEEEEe-cCCeEEE------------------Ee-CCeEE---EEE---------ecCCCceeceEEc
Q 017520 79 NHPEDASMDKNGVIYTAT-RDGWIKR------------------LQ-DGTWV---NWK---------FIDSQTLVGLTST 126 (370)
Q Consensus 79 ~~P~~i~~d~~G~l~v~~-~~g~I~~------------------~~-~g~~~---~~~---------~~~~~p~~gl~~d 126 (370)
.+-.++++.+||.++++. .|+.|.. +. +|... .+. ....... +++++
T Consensus 16 ~~v~sv~~SpDG~~iASas~D~TV~d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~V~-~vawS 94 (588)
T 2j04_A 16 DWKNNLTWARDGTLYLTTFPDISIGQPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVCYPR-VCKPS 94 (588)
T ss_dssp SSSCCEEECTTSCEEEECSSSEEEEEECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCCEE-EEEEC
T ss_pred ccEEEEEECCCCCEEEEEcCCceeecccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCCcEE-EEEEC
Confidence 467889999999988876 5555531 11 11100 000 0112345 89999
Q ss_pred CCCcEEEEeCCCc-eEEEcCCC-eEEEEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEE
Q 017520 127 KEGHLIICDNANG-LHKVSEDG-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKY 204 (370)
Q Consensus 127 ~~G~L~v~~~~~g-i~~~~~~g-~~~~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~ 204 (370)
|||...++....| +..++..+ +..+. .....+...+++++++|||++.++.+ .+|.|..|
T Consensus 95 PdG~~LAs~s~dg~V~iwd~~~~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs-----------------~DGtVkIW 156 (588)
T 2j04_A 95 PIDDWMAVLSNNGNVSVFKDNKMLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGN-----------------EDGELQFF 156 (588)
T ss_dssp SSSSCEEEEETTSCEEEEETTEEEEECC-CSSCSTTTCEEEEEECSSSSCEEEEE-----------------TTSEEEEE
T ss_pred CCCCEEEEEeCCCcEEEEeCCceeeecc-CCCccccccEEEEEEcCCCCEEEEEc-----------------CCCEEEEE
Confidence 9998555444444 44554444 33332 11111123578999999997444432 35789999
Q ss_pred eCCCCe--------EEEEecC----CCCccceEEccCCCEEEEEeCCc-EEEEEeCCCCCCc-eeeeccCCCCCCCceeE
Q 017520 205 DPSSNI--------TTLVADG----FYFANGVALSRDEDYVVVCESWK-CRKYWLKGERKGK-LETFAENLPGAPDNINL 270 (370)
Q Consensus 205 d~~t~~--------~~~~~~~----~~~p~gi~~~~dg~~l~v~~~~~-l~~~~~~~~~~~~-~~~~~~~~~g~p~~i~~ 270 (370)
|.+++. +..+... ......++++||| +..+..++ +..+++++....+ ...+..........+++
T Consensus 157 d~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaF 234 (588)
T 2j04_A 157 SIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKI 234 (588)
T ss_dssp ECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEE
T ss_pred ECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEE
Confidence 988764 2333211 2356789999999 66666666 9999987754321 11221112233566777
Q ss_pred CCCCCEEEEEe
Q 017520 271 APDGTFWIAII 281 (370)
Q Consensus 271 d~~G~lwv~~~ 281 (370)
. |+..++..
T Consensus 235 s--g~~LASa~ 243 (588)
T 2j04_A 235 V--DYKVVLTC 243 (588)
T ss_dssp E--TTEEEEEC
T ss_pred E--CCEEEEEe
Confidence 6 45555543
No 233
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.18 E-value=0.0012 Score=64.94 Aligned_cols=42 Identities=21% Similarity=0.288 Sum_probs=29.4
Q ss_pred eEEEEEC-CCCcEEEEEeCCCCCccccceeEEEECCEEEEEeCCC
Q 017520 318 AHLIHVA-EDGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTS 361 (370)
Q Consensus 318 g~v~~~~-~~g~~~~~~~~~~g~~~~~~t~~~~~~g~L~~gs~~~ 361 (370)
+.++.+| ..|++++.+....+.....+ ....+|++|++...+
T Consensus 485 g~l~a~D~~tG~~lw~~~~~~~~~~~p~--~~~~~G~~yv~~~~G 527 (571)
T 2ad6_A 485 GYLKALDNKDGKELWNFKMPSGGIGSPM--TYSFKGKQYIGSMYG 527 (571)
T ss_dssp SEEEEEETTTCCEEEEEECSSCCCSCCE--EEEETTEEEEEEEEC
T ss_pred CeEEEEECCCCCEEEEEeCCCCcEeeeE--EEEECCEEEEEEECC
Confidence 5689999 57999999987665422222 224789999987654
No 234
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=98.16 E-value=0.00035 Score=63.91 Aligned_cols=144 Identities=10% Similarity=0.043 Sum_probs=83.6
Q ss_pred CceeceEEcCCCcEEEEeCCCc-eEEEc-CCC-eEEEEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccc
Q 017520 118 QTLVGLTSTKEGHLIICDNANG-LHKVS-EDG-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILE 194 (370)
Q Consensus 118 ~p~~gl~~d~~G~L~v~~~~~g-i~~~~-~~g-~~~~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~ 194 (370)
... .++++++|+++++....+ |..++ .++ .........+. ...+..++++++|+..++.+
T Consensus 18 ~v~-~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h-~~~v~~~~~sp~g~~l~s~s--------------- 80 (345)
T 3fm0_A 18 RCW-FLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGH-QRTVRKVAWSPCGNYLASAS--------------- 80 (345)
T ss_dssp CEE-EEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSC-SSCEEEEEECTTSSEEEEEE---------------
T ss_pred cEE-EEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeecccc-CCcEEEEEECCCCCEEEEEE---------------
Confidence 556 899999998766544444 44455 444 22111111221 24678899999998766643
Q ss_pred cCCCceEEEEeCCCCeEE---EEecCCCCccceEEccCCCEEEEEeCCc-EEEEEeCCCCCCceeeeccCCCCCCCceeE
Q 017520 195 GKPHGQLLKYDPSSNITT---LVADGFYFANGVALSRDEDYVVVCESWK-CRKYWLKGERKGKLETFAENLPGAPDNINL 270 (370)
Q Consensus 195 ~~~~g~l~~~d~~t~~~~---~~~~~~~~p~gi~~~~dg~~l~v~~~~~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~ 270 (370)
.++.+..+|..++..+ .+.........++++++++.++.+...+ |..|++.....................+++
T Consensus 81 --~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~ 158 (345)
T 3fm0_A 81 --FDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVW 158 (345)
T ss_dssp --TTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEE
T ss_pred --CCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEE
Confidence 3456666766555332 2222234567899999999777777777 888988654221111111122223445677
Q ss_pred CCCCCEEEEE
Q 017520 271 APDGTFWIAI 280 (370)
Q Consensus 271 d~~G~lwv~~ 280 (370)
.++|++.++.
T Consensus 159 ~p~~~~l~s~ 168 (345)
T 3fm0_A 159 HPSQELLASA 168 (345)
T ss_dssp CSSSSCEEEE
T ss_pred CCCCCEEEEE
Confidence 8888644443
No 235
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=98.16 E-value=0.00046 Score=62.48 Aligned_cols=175 Identities=14% Similarity=-0.000 Sum_probs=99.7
Q ss_pred CCCcceEEcCCCcEEE--Eec---CCeEEEEe--CCeEEEE--EecCCCceeceEEcCC---Cc-EEEEeCCCceEEEc-
Q 017520 79 NHPEDASMDKNGVIYT--ATR---DGWIKRLQ--DGTWVNW--KFIDSQTLVGLTSTKE---GH-LIICDNANGLHKVS- 144 (370)
Q Consensus 79 ~~P~~i~~d~~G~l~v--~~~---~g~I~~~~--~g~~~~~--~~~~~~p~~gl~~d~~---G~-L~v~~~~~gi~~~~- 144 (370)
....++++.++|..++ ++. +|.|..|+ +++.... ........ ++++.++ |+ |+.+...+.|..++
T Consensus 19 ~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~l~~~~~dg~i~iwd~ 97 (357)
T 3i2n_A 19 YTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIK-CGTFGATSLQQRYLATGDFGGNLHIWNL 97 (357)
T ss_dssp SCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEE-EEECTTCCTTTCCEEEEETTSCEEEECT
T ss_pred CceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEE-EEEEcCCCCCCceEEEecCCCeEEEEeC
Confidence 4567889999885443 333 78899998 5554322 23344566 8999987 55 55555445566666
Q ss_pred CCC---eEEEEeecCCcccccccce------EEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCe--EEE
Q 017520 145 EDG---VENFLSYVNGSKLRFANDV------VEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNI--TTL 213 (370)
Q Consensus 145 ~~g---~~~~~~~~~g~~~~~~~~l------~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~--~~~ 213 (370)
.++ ...+... ...+..+ +++++|+..++.+ .++.|..||..++. ...
T Consensus 98 ~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~s~~~~~l~~~~-----------------~d~~i~vwd~~~~~~~~~~ 155 (357)
T 3i2n_A 98 EAPEMPVYSVKGH-----KEIINAIDGIGGLGIGEGAPEIVTGS-----------------RDGTVKVWDPRQKDDPVAN 155 (357)
T ss_dssp TSCSSCSEEECCC-----SSCEEEEEEESGGGCC-CCCEEEEEE-----------------TTSCEEEECTTSCSSCSEE
T ss_pred CCCCccEEEEEec-----ccceEEEeeccccccCCCccEEEEEe-----------------CCCeEEEEeCCCCCCccee
Confidence 433 2322111 1234444 4567887666643 34678888887654 232
Q ss_pred EecCC----CCccceE----EccCCCEEEEEeCCc-EEEEEeCCCCCCceeeeccCCCCCCCceeECC---CCCEEEEE
Q 017520 214 VADGF----YFANGVA----LSRDEDYVVVCESWK-CRKYWLKGERKGKLETFAENLPGAPDNINLAP---DGTFWIAI 280 (370)
Q Consensus 214 ~~~~~----~~p~gi~----~~~dg~~l~v~~~~~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~---~G~lwv~~ 280 (370)
+.... .....++ ++++++.++.+...+ |..|++...+. ... .........+++++ +|++.++.
T Consensus 156 ~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~---~~~-~~~~~~v~~~~~~~~~~~~~~l~~~ 230 (357)
T 3i2n_A 156 MEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMAL---RWE-TNIKNGVCSLEFDRKDISMNKLVAT 230 (357)
T ss_dssp ECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEE---EEE-EECSSCEEEEEESCSSSSCCEEEEE
T ss_pred ccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCce---eee-cCCCCceEEEEcCCCCCCCCEEEEE
Confidence 22111 1233444 678999888877767 99999865422 111 12233456678887 77654443
No 236
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.16 E-value=7.4e-05 Score=73.54 Aligned_cols=168 Identities=14% Similarity=0.089 Sum_probs=99.1
Q ss_pred CcceEEcCCC--cEEEEecCCeEEEEe--CCeEEEEEecCCCceeceEEcCCCcEEEE-eCC----CceEEEc-CCC-eE
Q 017520 81 PEDASMDKNG--VIYTATRDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGHLIIC-DNA----NGLHKVS-EDG-VE 149 (370)
Q Consensus 81 P~~i~~d~~G--~l~v~~~~g~I~~~~--~g~~~~~~~~~~~p~~gl~~d~~G~L~v~-~~~----~gi~~~~-~~g-~~ 149 (370)
....++.++| .+|++...+.+..++ +|+.+.+..... . .+++++||+.++. ... ..|+.++ .+| .+
T Consensus 112 ~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~--~-~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~ 188 (582)
T 3o4h_A 112 MRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG--F-GFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR 188 (582)
T ss_dssp BEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS--C-EEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE
T ss_pred ceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC--c-eEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce
Confidence 3344555554 466666556666777 677666654433 6 8899999986663 222 2478888 566 66
Q ss_pred EEEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecCC-CCccceE---
Q 017520 150 NFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGF-YFANGVA--- 225 (370)
Q Consensus 150 ~~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~-~~p~gi~--- 225 (370)
.+... . ...+.++++|||+..++... .....|+++|.++++.+ +..+. ..+..++
T Consensus 189 ~l~~~-~----~~~~~~~~SpDG~~l~~~~~---------------~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~ 247 (582)
T 3o4h_A 189 VFDSG-E----GSFSSASISPGMKVTAGLET---------------AREARLVTVDPRDGSVE-DLELPSKDFSSYRPTA 247 (582)
T ss_dssp EECCS-S----CEEEEEEECTTSCEEEEEEC---------------SSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSE
T ss_pred EeecC-C----CccccceECCCCCEEEEccC---------------CCeeEEEEEcCCCCcEE-EccCCCcChhhhhhcc
Confidence 55321 1 24578899999974443221 12238999999988877 44332 2344566
Q ss_pred -----EccCCCEEEEEeCCc-EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCCEEEEEe
Q 017520 226 -----LSRDEDYVVVCESWK-CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAII 281 (370)
Q Consensus 226 -----~~~dg~~l~v~~~~~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~ 281 (370)
+++||..++.+...+ +..|++ + +... ...+....++++ +|.+++...
T Consensus 248 ~~~~~~spdg~~~~~~~~~g~~~l~~~-g----~~~~---~~~~~v~~~~~s-dg~~l~~~s 300 (582)
T 3o4h_A 248 ITWLGYLPDGRLAVVARREGRSAVFID-G----ERVE---APQGNHGRVVLW-RGKLVTSHT 300 (582)
T ss_dssp EEEEEECTTSCEEEEEEETTEEEEEET-T----EEEC---CCSSEEEEEEEE-TTEEEEEEE
T ss_pred ccceeEcCCCcEEEEEEcCCcEEEEEE-C----Ceec---cCCCceEEEEec-CCEEEEEEc
Confidence 999996444444445 666665 3 2111 111223456777 887665543
No 237
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.15 E-value=0.0015 Score=64.39 Aligned_cols=62 Identities=10% Similarity=0.087 Sum_probs=41.3
Q ss_pred eEEcCCCcEEEEecCCeEEEEe--CCeEEEEEecCC-----CceeceEEcCCCcEEEEeC------CCceEEEc-CCC
Q 017520 84 ASMDKNGVIYTATRDGWIKRLQ--DGTWVNWKFIDS-----QTLVGLTSTKEGHLIICDN------ANGLHKVS-EDG 147 (370)
Q Consensus 84 i~~d~~G~l~v~~~~g~I~~~~--~g~~~~~~~~~~-----~p~~gl~~d~~G~L~v~~~------~~gi~~~~-~~g 147 (370)
++++ +|.||+++.++.|+.+| +|+...-..... .......+. +|.+|++.. .+.|+.+| .+|
T Consensus 111 ~~~~-~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~-~g~v~vg~~~~~~~~~g~v~a~D~~tG 186 (571)
T 2ad6_A 111 LAYG-AGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVA-KDTVLMGCSGAELGVRGAVNAFDLKTG 186 (571)
T ss_dssp CEEE-TTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-TTEEEEECBCGGGTCCCEEEEEETTTC
T ss_pred cEEE-CCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEE-CCEEEEEecCCccCCCCEEEEEECCCC
Confidence 4554 67999999999999999 787654333222 111022333 688999875 34689999 678
No 238
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=98.14 E-value=2.7e-05 Score=71.74 Aligned_cols=184 Identities=7% Similarity=-0.120 Sum_probs=104.3
Q ss_pred CCcceEEcCCCc-EEEEecCCeEEEEe--CCe----EEEEEecCCCceeceEEcCCCcEEE-EeCCCceEEEc-CCC-e-
Q 017520 80 HPEDASMDKNGV-IYTATRDGWIKRLQ--DGT----WVNWKFIDSQTLVGLTSTKEGHLII-CDNANGLHKVS-EDG-V- 148 (370)
Q Consensus 80 ~P~~i~~d~~G~-l~v~~~~g~I~~~~--~g~----~~~~~~~~~~p~~gl~~d~~G~L~v-~~~~~gi~~~~-~~g-~- 148 (370)
...++++.++|+ |.+++.+|.|..|+ +++ ...+........ ++++.++|++++ +...+.|..++ .++ .
T Consensus 57 ~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 135 (377)
T 3dwl_C 57 IVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAAT-FVRWSPNEDKFAVGSGARVISVCYFEQENDW 135 (377)
T ss_dssp CEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEE-EEECCTTSSCCEEEESSSCEEECCC-----C
T ss_pred eEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceE-EEEECCCCCEEEEEecCCeEEEEEECCcccc
Confidence 356788888774 66677899999998 444 233333444566 899999987544 44444455555 333 1
Q ss_pred EEEEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCC------------------e
Q 017520 149 ENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSN------------------I 210 (370)
Q Consensus 149 ~~~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~------------------~ 210 (370)
... ....+.....+..+++.++|++.++.+ .++.|..||..++ +
T Consensus 136 ~~~-~~~~~~h~~~v~~~~~~~~~~~l~~~~-----------------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 197 (377)
T 3dwl_C 136 WVS-KHLKRPLRSTILSLDWHPNNVLLAAGC-----------------ADRKAYVLSAYVRDVDAKPEASVWGSRLPFNT 197 (377)
T ss_dssp CCC-EEECSSCCSCEEEEEECTTSSEEEEEE-----------------SSSCEEEEEECCSSCC-CCCSCSSCSCCCEEE
T ss_pred eee-eEeecccCCCeEEEEEcCCCCEEEEEe-----------------CCCEEEEEEEEecccCCCccccccccccchhh
Confidence 111 111221124678899999998666643 2466777775321 1
Q ss_pred EEEEecCCCCccceEEccCCCEEEEEeCCc-EEEEEeCCCCCCc--eeeeccCCCCCCCceeECCCCCEEEEEecC
Q 017520 211 TTLVADGFYFANGVALSRDEDYVVVCESWK-CRKYWLKGERKGK--LETFAENLPGAPDNINLAPDGTFWIAIIKL 283 (370)
Q Consensus 211 ~~~~~~~~~~p~gi~~~~dg~~l~v~~~~~-l~~~~~~~~~~~~--~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~ 283 (370)
.............++++++++.++.+...+ |..|++...+... ...+. ........++++++|++.++....
T Consensus 198 ~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~~ 272 (377)
T 3dwl_C 198 VCAEYPSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVK-LSQLPLRSLLWANESAIVAAGYNY 272 (377)
T ss_dssp EEECCCCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEE-CSSSCEEEEEEEETTEEEEEESSS
T ss_pred hhhcccCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeec-CCCCceEEEEEcCCCCEEEEEcCC
Confidence 111112223356789999999787777777 8888887643210 11121 222234567888888877666544
No 239
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.13 E-value=0.0013 Score=59.91 Aligned_cols=175 Identities=7% Similarity=0.033 Sum_probs=100.8
Q ss_pred cceEEcCCCcEEEEecCCeEEEEeC-C-eEEEEEec---CCCceeceEEcCCCcEEEEeCCCceEEEcCCC--eEEEEee
Q 017520 82 EDASMDKNGVIYTATRDGWIKRLQD-G-TWVNWKFI---DSQTLVGLTSTKEGHLIICDNANGLHKVSEDG--VENFLSY 154 (370)
Q Consensus 82 ~~i~~d~~G~l~v~~~~g~I~~~~~-g-~~~~~~~~---~~~p~~gl~~d~~G~L~v~~~~~gi~~~~~~g--~~~~~~~ 154 (370)
.+|++++ +.+|+....|.|++-.| | .++..... .+.+. ++++.+++++|++....++++-...| ++.+...
T Consensus 83 ~~i~~~~-~~~~~~g~~g~i~~S~DgG~tW~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~g~v~~S~DgG~tW~~~~~~ 160 (327)
T 2xbg_A 83 NSVSFQG-NEGWIVGEPPIMLHTTDGGQSWSQIPLDPKLPGSPR-LIKALGNGSAEMITNVGAIYRTKDSGKNWQALVQE 160 (327)
T ss_dssp EEEEEET-TEEEEEEETTEEEEESSTTSSCEECCCCTTCSSCEE-EEEEEETTEEEEEETTCCEEEESSTTSSEEEEECS
T ss_pred EEEEecC-CeEEEEECCCeEEEECCCCCCceECccccCCCCCeE-EEEEECCCCEEEEeCCccEEEEcCCCCCCEEeecC
Confidence 4577775 78898777788888764 4 35544322 23466 78877788999887555677766555 5554322
Q ss_pred cCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCC-CCeEEEEecC-CCCccceEEccCCCE
Q 017520 155 VNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPS-SNITTLVADG-FYFANGVALSRDEDY 232 (370)
Q Consensus 155 ~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~-t~~~~~~~~~-~~~p~gi~~~~dg~~ 232 (370)
.. ..+..++++++|++|+... .+.+++-+.. ...++.+... -.....++++++++
T Consensus 161 ~~----~~~~~~~~~~~~~~~~~g~------------------~G~~~~S~d~gG~tW~~~~~~~~~~~~~~~~~~~g~- 217 (327)
T 2xbg_A 161 AI----GVMRNLNRSPSGEYVAVSS------------------RGSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGR- 217 (327)
T ss_dssp CC----CCEEEEEECTTSCEEEEET------------------TSSEEEEECTTCSSCEEEECCSSSCEEEEEECTTSC-
T ss_pred CC----cceEEEEEcCCCcEEEEEC------------------CCcEEEEeCCCCCceeECCCCCCCccceeEECCCCC-
Confidence 11 2456788889998887643 3567776533 2334433221 12345677888887
Q ss_pred EEEEeCCc-EEEEEeCCCCCCceeeeccC-CCC--CCCceeECCCCCEEEEEecC
Q 017520 233 VVVCESWK-CRKYWLKGERKGKLETFAEN-LPG--APDNINLAPDGTFWIAIIKL 283 (370)
Q Consensus 233 l~v~~~~~-l~~~~~~~~~~~~~~~~~~~-~~g--~p~~i~~d~~G~lwv~~~~~ 283 (370)
+|+....+ +++.+.++.+ +.+.+... ++. ....+..++++.+|++...+
T Consensus 218 ~~~~~~~G~~~~s~~D~G~--tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g 270 (327)
T 2xbg_A 218 LWMIVNGGKIAFSDPDNSE--NWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAG 270 (327)
T ss_dssp EEEEETTTEEEEEETTEEE--EECCCBCTTSSCCSCEEEEEESSSSCEEEEESTT
T ss_pred EEEEeCCceEEEecCCCCC--eeEeccCCcccCCcceEEEEecCCCEEEEEeCCC
Confidence 66666556 6554323211 11111100 111 01235567788999986544
No 240
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.12 E-value=0.0023 Score=64.32 Aligned_cols=39 Identities=23% Similarity=0.240 Sum_probs=27.8
Q ss_pred eEEEEECC-CCcEEEEEeCCCCCccccceeEEEECCEEEEEe
Q 017520 318 AHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVIS 358 (370)
Q Consensus 318 g~v~~~~~-~g~~~~~~~~~~g~~~~~~t~~~~~~g~L~~gs 358 (370)
+.+..+|. .|++++.|..+.+.....++. +.+|+.|++.
T Consensus 498 g~l~a~D~~tG~~lw~~~~~~~~~~~p~~y--~~~G~~~v~~ 537 (677)
T 1kb0_A 498 GRLVAYHAATGEKLWEAPTGTGVVAAPSTY--MVDGRQYVSV 537 (677)
T ss_dssp SEEEEEETTTCCEEEEEECSSCCCSCCEEE--EETTEEEEEE
T ss_pred CcEEEEECCCCceeeeeeCCCCcccCCEEE--EeCCEEEEEE
Confidence 56899994 699999998877653333222 4788888875
No 241
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.12 E-value=0.00017 Score=71.93 Aligned_cols=193 Identities=15% Similarity=0.052 Sum_probs=104.8
Q ss_pred CCcceEEcCCCcEEEEe--c-CC--eEEEEe-CCeEEEEEecCCC---------ceeceEEc--CCCcE--EEEeC-CCc
Q 017520 80 HPEDASMDKNGVIYTAT--R-DG--WIKRLQ-DGTWVNWKFIDSQ---------TLVGLTST--KEGHL--IICDN-ANG 139 (370)
Q Consensus 80 ~P~~i~~d~~G~l~v~~--~-~g--~I~~~~-~g~~~~~~~~~~~---------p~~gl~~d--~~G~L--~v~~~-~~g 139 (370)
...++++++++..|+.. . ++ .|+... ++..+.+...... .. ..++. |||+. +.+.. ...
T Consensus 25 ~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~SPDg~~~la~~~~~~~~ 103 (662)
T 3azo_A 25 RPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGF-PWAGVPRPAGGPLLVFTHFGDQR 103 (662)
T ss_dssp CCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCC-CEEEECCSSSSCEEEEEBTTTCC
T ss_pred ccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCc-cceeeeecCCCeEEEEEECCCCe
Confidence 44556777665555554 1 33 344434 5555444322111 00 23233 78854 44433 246
Q ss_pred eEEEcCC----C-eEEEEeecCCcccccccceEEcCCCc-EEEEeCCCCCCCccceecccccCCCceEEEEeCCC-----
Q 017520 140 LHKVSED----G-VENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSS----- 208 (370)
Q Consensus 140 i~~~~~~----g-~~~~~~~~~g~~~~~~~~l~~d~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t----- 208 (370)
|+.++.+ + .+.+...........+.+++++|||+ |+++..... ..........|+++|.++
T Consensus 104 l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~--------~~~~~~~~~~i~~~~~~~~~~~~ 175 (662)
T 3azo_A 104 LYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFT--------GEGPSDVRRFLAAVPLDGSAAAD 175 (662)
T ss_dssp EEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEEC--------SSSTTCEEEEEEEEETTSTTTTC
T ss_pred EEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEeccc--------CCCCCCceeEEEEEECCCCcccc
Confidence 8888843 6 54443211000113456789999996 555532100 000001235799999987
Q ss_pred -CeEEEEe-cCCCCccceEEccCCCEEEEEeCC--------c-EEEEEeCC-CCCCceeeeccCCCCCCCceeECCCCCE
Q 017520 209 -NITTLVA-DGFYFANGVALSRDEDYVVVCESW--------K-CRKYWLKG-ERKGKLETFAENLPGAPDNINLAPDGTF 276 (370)
Q Consensus 209 -~~~~~~~-~~~~~p~gi~~~~dg~~l~v~~~~--------~-l~~~~~~~-~~~~~~~~~~~~~~g~p~~i~~d~~G~l 276 (370)
++.+.+. .+......++++|||+.|+++... . |+.+++++ .+......+.....+....+.+++||++
T Consensus 176 ~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l 255 (662)
T 3azo_A 176 RSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSL 255 (662)
T ss_dssp GGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCE
T ss_pred CCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeE
Confidence 6666665 444556778999999988776522 3 99999873 3222333333222233556788899997
Q ss_pred EEEEe
Q 017520 277 WIAII 281 (370)
Q Consensus 277 wv~~~ 281 (370)
++...
T Consensus 256 ~~~~~ 260 (662)
T 3azo_A 256 IVATD 260 (662)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 76654
No 242
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=98.10 E-value=0.0006 Score=62.19 Aligned_cols=184 Identities=11% Similarity=0.134 Sum_probs=105.7
Q ss_pred CCcceEEcCC--C-cEEEEecCCeEEEEe--CCeEE---EEEecCCCceeceEEcCC--CcEEE-EeCCCceEEEc-CCC
Q 017520 80 HPEDASMDKN--G-VIYTATRDGWIKRLQ--DGTWV---NWKFIDSQTLVGLTSTKE--GHLII-CDNANGLHKVS-EDG 147 (370)
Q Consensus 80 ~P~~i~~d~~--G-~l~v~~~~g~I~~~~--~g~~~---~~~~~~~~p~~gl~~d~~--G~L~v-~~~~~gi~~~~-~~g 147 (370)
...++++.++ | .|++++.+|.|..|+ +++.. .+........ ++++.++ |.+++ +...+.|..++ .++
T Consensus 57 ~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~ 135 (379)
T 3jrp_A 57 PVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVN-SVQWAPHEYGPLLLVASSDGKVSVVEFKEN 135 (379)
T ss_dssp CEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEE-EEEECCGGGCSEEEEEETTSEEEEEECCTT
T ss_pred cEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceE-EEEeCCCCCCCEEEEecCCCcEEEEecCCC
Confidence 3456777644 5 566777899999999 66532 2222344566 8999988 76555 44444566666 333
Q ss_pred --eEEEEeecCCcccccccceEEcC-------------CCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeE-
Q 017520 148 --VENFLSYVNGSKLRFANDVVEAS-------------DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNIT- 211 (370)
Q Consensus 148 --~~~~~~~~~g~~~~~~~~l~~d~-------------~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~- 211 (370)
....... + ....+..+++.+ ++.+.++.+ .++.|..||..++..
T Consensus 136 ~~~~~~~~~--~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----------------~dg~i~i~d~~~~~~~ 195 (379)
T 3jrp_A 136 GTTSPIIID--A-HAIGVNSASWAPATIEEDGEHNGTKESRKFVTGG-----------------ADNLVKIWKYNSDAQT 195 (379)
T ss_dssp SCCCEEEEE--C-CTTCEEEEEECCCC----------CTTCEEEEEE-----------------TTSCEEEEEEETTTTE
T ss_pred CceeeEEec--C-CCCceEEEEEcCccccccccccCCCCCCEEEEEe-----------------CCCeEEEEEecCCCcc
Confidence 2221111 1 113567788888 577665543 346777887654321
Q ss_pred -E---EEecCCCCccceEEccC---CCEEEEEeCCc-EEEEEeCCCCCCceeeeccC--CCCCCCceeECCCCCEE-EEE
Q 017520 212 -T---LVADGFYFANGVALSRD---EDYVVVCESWK-CRKYWLKGERKGKLETFAEN--LPGAPDNINLAPDGTFW-IAI 280 (370)
Q Consensus 212 -~---~~~~~~~~p~gi~~~~d---g~~l~v~~~~~-l~~~~~~~~~~~~~~~~~~~--~~g~p~~i~~d~~G~lw-v~~ 280 (370)
. .+.........++++++ ++.++.+...+ |..|++.............. .......++++++|++. ++.
T Consensus 196 ~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~ 275 (379)
T 3jrp_A 196 YVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSG 275 (379)
T ss_dssp EEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEE
T ss_pred eeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEec
Confidence 1 11122334578999999 78777777777 88898875421112222211 22334557788888644 444
Q ss_pred ecCc
Q 017520 281 IKLD 284 (370)
Q Consensus 281 ~~~~ 284 (370)
..+.
T Consensus 276 ~dg~ 279 (379)
T 3jrp_A 276 GDNK 279 (379)
T ss_dssp SSSS
T ss_pred CCCc
Confidence 5443
No 243
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=98.10 E-value=0.0025 Score=59.70 Aligned_cols=149 Identities=9% Similarity=0.007 Sum_probs=94.0
Q ss_pred CCcceEEcCCC---cEEEEecCCeEEEEe--CCeEE----------------------------------------EE-E
Q 017520 80 HPEDASMDKNG---VIYTATRDGWIKRLQ--DGTWV----------------------------------------NW-K 113 (370)
Q Consensus 80 ~P~~i~~d~~G---~l~v~~~~g~I~~~~--~g~~~----------------------------------------~~-~ 113 (370)
...++++.+++ .+.+++.+|.|..|+ ++... .+ .
T Consensus 95 ~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (447)
T 3dw8_B 95 KINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFAN 174 (447)
T ss_dssp CCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECS
T ss_pred ceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEecc
Confidence 35678888876 466777899999888 32221 11 1
Q ss_pred ecCCCceeceEEcCCCcEEEEeCCCceEEEc-C-CC--eEEEEee---cCCcccccccceEEcCCC-cEEEEeCCCCCCC
Q 017520 114 FIDSQTLVGLTSTKEGHLIICDNANGLHKVS-E-DG--VENFLSY---VNGSKLRFANDVVEASDG-SLYFTVSSSKYLP 185 (370)
Q Consensus 114 ~~~~~p~~gl~~d~~G~L~v~~~~~gi~~~~-~-~g--~~~~~~~---~~g~~~~~~~~l~~d~~G-~l~v~d~~~~~~~ 185 (370)
....... ++++.++|+++++..++.|..++ . .+ ...+... ..+ ....+..++++++| ++.++.+
T Consensus 175 ~h~~~v~-~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~p~~~~~l~s~~------ 246 (447)
T 3dw8_B 175 AHTYHIN-SISINSDYETYLSADDLRINLWHLEITDRSFNIVDIKPANMEE-LTEVITAAEFHPNSCNTFVYSS------ 246 (447)
T ss_dssp CCSSCCC-EEEECTTSSEEEEECSSEEEEEETTEEEEEEEEEECCCSSGGG-CCCCEEEEEECSSCTTEEEEEE------
T ss_pred CCCcceE-EEEEcCCCCEEEEeCCCeEEEEECCCCCceeeeeecccccccc-cCcceEEEEECCCCCcEEEEEe------
Confidence 1233456 89999999877766434455555 3 22 2222110 111 12357889999998 7766643
Q ss_pred ccceecccccCCCceEEEEeCCCCeE-----EEEecCCC------------CccceEEccCCCEEEEEeCCc-EEEEEeC
Q 017520 186 HEYCLDILEGKPHGQLLKYDPSSNIT-----TLVADGFY------------FANGVALSRDEDYVVVCESWK-CRKYWLK 247 (370)
Q Consensus 186 ~~~~~~~~~~~~~g~l~~~d~~t~~~-----~~~~~~~~------------~p~gi~~~~dg~~l~v~~~~~-l~~~~~~ 247 (370)
.++.|..||..+++. ..+..... ....++++++++.++.+.. + |..||+.
T Consensus 247 -----------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~ 314 (447)
T 3dw8_B 247 -----------SKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLN 314 (447)
T ss_dssp -----------TTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETT
T ss_pred -----------CCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCC
Confidence 357889999876653 33332221 5678999999998887777 7 8889886
Q ss_pred C
Q 017520 248 G 248 (370)
Q Consensus 248 ~ 248 (370)
.
T Consensus 315 ~ 315 (447)
T 3dw8_B 315 M 315 (447)
T ss_dssp C
T ss_pred C
Confidence 4
No 244
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=98.10 E-value=0.0053 Score=55.76 Aligned_cols=175 Identities=10% Similarity=0.051 Sum_probs=102.3
Q ss_pred CCcceEE-----cC-CCc-EEEEecCCeEEEEe-C-Ce--------EEEEEecCCCceeceEEcCCCcEEEEeCCCc-eE
Q 017520 80 HPEDASM-----DK-NGV-IYTATRDGWIKRLQ-D-GT--------WVNWKFIDSQTLVGLTSTKEGHLIICDNANG-LH 141 (370)
Q Consensus 80 ~P~~i~~-----d~-~G~-l~v~~~~g~I~~~~-~-g~--------~~~~~~~~~~p~~gl~~d~~G~L~v~~~~~g-i~ 141 (370)
.-.++++ .+ +|. |..++.++.|..|+ . ++ ...+........ .+++++++.+.++....+ |.
T Consensus 23 ~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~-~~~~~~~~~~l~s~s~D~~v~ 101 (343)
T 2xzm_R 23 WVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVS-DLALSQENCFAISSSWDKTLR 101 (343)
T ss_dssp CEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEE-EEEECSSTTEEEEEETTSEEE
T ss_pred hhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceE-EEEECCCCCEEEEEcCCCcEE
Confidence 3466777 44 665 55666889999998 2 21 122223334456 899999998766554444 55
Q ss_pred EEc-CCC--eEEEEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEec--
Q 017520 142 KVS-EDG--VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD-- 216 (370)
Q Consensus 142 ~~~-~~g--~~~~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~-- 216 (370)
.++ +++ ...+... ...+..+++.++|+..++.+ .++.|..||...........
T Consensus 102 lwd~~~~~~~~~~~~h-----~~~v~~v~~sp~~~~l~s~~-----------------~d~~i~~wd~~~~~~~~~~~~~ 159 (343)
T 2xzm_R 102 LWDLRTGTTYKRFVGH-----QSEVYSVAFSPDNRQILSAG-----------------AEREIKLWNILGECKFSSAEKE 159 (343)
T ss_dssp EEETTSSCEEEEEECC-----CSCEEEEEECSSTTEEEEEE-----------------TTSCEEEEESSSCEEEECCTTT
T ss_pred EEECCCCcEEEEEcCC-----CCcEEEEEECCCCCEEEEEc-----------------CCCEEEEEeccCCceeeeeccc
Confidence 555 566 3333221 13578899999998666643 34678888876433322221
Q ss_pred -CCCCccceEEccCC----------CEEEEEeCCc-EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCCEEEEEe
Q 017520 217 -GFYFANGVALSRDE----------DYVVVCESWK-CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAII 281 (370)
Q Consensus 217 -~~~~p~gi~~~~dg----------~~l~v~~~~~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~ 281 (370)
.......+++++++ ..+..+...+ |..|+... .....+. ...+....++++++|++.++..
T Consensus 160 ~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~---~~~~~~~-~h~~~v~~~~~s~~g~~l~sgs 232 (343)
T 2xzm_R 160 NHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNF---QIRYTFK-AHESNVNHLSISPNGKYIATGG 232 (343)
T ss_dssp SCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTT---EEEEEEE-CCSSCEEEEEECTTSSEEEEEE
T ss_pred CCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCC---ceeEEEc-CccccceEEEECCCCCEEEEEc
Confidence 11234567777776 5566666666 88887322 1122222 2333355688899998655543
No 245
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.09 E-value=0.0072 Score=57.09 Aligned_cols=149 Identities=13% Similarity=0.118 Sum_probs=89.6
Q ss_pred CCCcceEEcCCCcEEEEecCCeEEEEe--CCeEE-EEEecCCCceeceEEc--CCCcEEE-EeCCCceEEEc-CCC--eE
Q 017520 79 NHPEDASMDKNGVIYTATRDGWIKRLQ--DGTWV-NWKFIDSQTLVGLTST--KEGHLII-CDNANGLHKVS-EDG--VE 149 (370)
Q Consensus 79 ~~P~~i~~d~~G~l~v~~~~g~I~~~~--~g~~~-~~~~~~~~p~~gl~~d--~~G~L~v-~~~~~gi~~~~-~~g--~~ 149 (370)
....++++.+++.+.+++.+|.|..|+ +++.. .+........ ++++. +++.+++ +..++.+..++ +++ ..
T Consensus 163 ~~V~~l~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~-~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~ 241 (464)
T 3v7d_B 163 GGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVR-CLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVP 241 (464)
T ss_dssp SCEEEEEECSTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEE-EEEEEESSSCEEEEEEETTSCEEEEECCCCCCC-
T ss_pred cCEEEEEEcCCCEEEEEeCCCCEEEEECCCCcEEEEECCCCCccE-EEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccc
Confidence 345678888888888888999999999 56543 3333444455 77776 5665444 44444455555 433 21
Q ss_pred EEE-------------------eecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCe
Q 017520 150 NFL-------------------SYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNI 210 (370)
Q Consensus 150 ~~~-------------------~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~ 210 (370)
... ....+. ...+ ..++++|+..++.+ .++.|..||..+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v--~~~~~~~~~l~~~~-----------------~d~~i~vwd~~~~~ 301 (464)
T 3v7d_B 242 DHGEEHDYPLVFHTPEENPYFVGVLRGH-MASV--RTVSGHGNIVVSGS-----------------YDNTLIVWDVAQMK 301 (464)
T ss_dssp -----CCSSEEESCGGGCTTEEEEECCC-SSCE--EEEEEETTEEEEEE-----------------TTSCEEEEETTTTE
T ss_pred cccccCCcceEeeccCCCeEEEEEccCc-cceE--EEEcCCCCEEEEEe-----------------CCCeEEEEECCCCc
Confidence 110 000110 0111 23345565444432 35789999988776
Q ss_pred EEEEecC-CCCccceEEccCCCEEEEEeCCc-EEEEEeCC
Q 017520 211 TTLVADG-FYFANGVALSRDEDYVVVCESWK-CRKYWLKG 248 (370)
Q Consensus 211 ~~~~~~~-~~~p~gi~~~~dg~~l~v~~~~~-l~~~~~~~ 248 (370)
......+ ......++++++++.++.+...+ |..|++..
T Consensus 302 ~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~ 341 (464)
T 3v7d_B 302 CLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLEN 341 (464)
T ss_dssp EEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTT
T ss_pred EEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCC
Confidence 5443332 34456889999999888888777 99999764
No 246
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=98.08 E-value=0.00015 Score=67.47 Aligned_cols=180 Identities=10% Similarity=0.096 Sum_probs=103.0
Q ss_pred CCcceEEcCCCc--EEEE----------ecCCeEEEEe--CCe---EEEEEecCCCceeceEEcCCCcEEEE-eCCCceE
Q 017520 80 HPEDASMDKNGV--IYTA----------TRDGWIKRLQ--DGT---WVNWKFIDSQTLVGLTSTKEGHLIIC-DNANGLH 141 (370)
Q Consensus 80 ~P~~i~~d~~G~--l~v~----------~~~g~I~~~~--~g~---~~~~~~~~~~p~~gl~~d~~G~L~v~-~~~~gi~ 141 (370)
...++++.++|. +.++ +.+|.|..|+ +++ ............ +++++++|.++++ ...+.|.
T Consensus 14 ~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~-~~~~s~~~~~l~~~~~dg~v~ 92 (416)
T 2pm9_A 14 RTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFN-DLDWSHNNKIIAGALDNGSLE 92 (416)
T ss_dssp ESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEE-EEEECSSSSCEEEEESSSCEE
T ss_pred hcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceE-EEEECCCCCeEEEEccCCeEE
Confidence 455677778775 4455 4577888888 332 111112334566 8999999975554 4444566
Q ss_pred EEc-CC---CeEEEEeecCCcccccccceEEcCC-CcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCe------
Q 017520 142 KVS-ED---GVENFLSYVNGSKLRFANDVVEASD-GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNI------ 210 (370)
Q Consensus 142 ~~~-~~---g~~~~~~~~~g~~~~~~~~l~~d~~-G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~------ 210 (370)
.++ .+ +.+.+.. ..+. ...+..+++.++ ++++++.+ .++.|..||..+++
T Consensus 93 vw~~~~~~~~~~~~~~-~~~h-~~~v~~~~~~~~~~~~l~s~~-----------------~dg~v~iwd~~~~~~~~~~~ 153 (416)
T 2pm9_A 93 LYSTNEANNAINSMAR-FSNH-SSSVKTVKFNAKQDNVLASGG-----------------NNGEIFIWDMNKCTESPSNY 153 (416)
T ss_dssp EECCSSTTSCCCEEEE-CCCS-SSCCCEEEECSSSTTBEEEEC-----------------SSSCEEBCBTTTTSSCTTTC
T ss_pred Eeecccccccccchhh-ccCC-ccceEEEEEcCCCCCEEEEEc-----------------CCCeEEEEECCCCccccccc
Confidence 666 43 2111111 1221 236788999998 77666643 34678888887654
Q ss_pred EEEEe----cCCCCccceEEccC-CCEEEEEeCCc-EEEEEeCCCCCCceeeeccCC-----CCCCCceeECCCC-CEEE
Q 017520 211 TTLVA----DGFYFANGVALSRD-EDYVVVCESWK-CRKYWLKGERKGKLETFAENL-----PGAPDNINLAPDG-TFWI 278 (370)
Q Consensus 211 ~~~~~----~~~~~p~gi~~~~d-g~~l~v~~~~~-l~~~~~~~~~~~~~~~~~~~~-----~g~p~~i~~d~~G-~lwv 278 (370)
..... ........++++++ ++.++.+...+ |..|++...+. ...+.... ......++++++| ++++
T Consensus 154 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 231 (416)
T 2pm9_A 154 TPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKE--VIHLSYTSPNSGIKQQLSVVEWHPKNSTRVA 231 (416)
T ss_dssp CCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEE--EEEECCCCCSSCCCCCEEEEEECSSCTTEEE
T ss_pred cccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCc--ceEEeccccccccCCceEEEEECCCCCCEEE
Confidence 21111 12234578999999 66555555556 99999765321 12221111 2335568888887 4444
Q ss_pred EEe
Q 017520 279 AII 281 (370)
Q Consensus 279 ~~~ 281 (370)
+..
T Consensus 232 ~~~ 234 (416)
T 2pm9_A 232 TAT 234 (416)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 247
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=98.08 E-value=0.00047 Score=63.93 Aligned_cols=150 Identities=13% Similarity=0.111 Sum_probs=96.8
Q ss_pred cceEEcC-CCcE-EEEecCCeEEEEe-C--Ce-EEEEEecCCCceeceEEcCCCcEEEEeCCCc-eEEEc-CCC--eEEE
Q 017520 82 EDASMDK-NGVI-YTATRDGWIKRLQ-D--GT-WVNWKFIDSQTLVGLTSTKEGHLIICDNANG-LHKVS-EDG--VENF 151 (370)
Q Consensus 82 ~~i~~d~-~G~l-~v~~~~g~I~~~~-~--g~-~~~~~~~~~~p~~gl~~d~~G~L~v~~~~~g-i~~~~-~~g--~~~~ 151 (370)
.++++.+ ++++ ..++.+|.|..|+ . ++ ...+....+... ++++.++|..+++....| |..++ .++ +..+
T Consensus 209 ~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~-~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~ 287 (380)
T 3iz6_a 209 LSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDIN-SVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVY 287 (380)
T ss_dssp EEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCC-EEEECTTSSEEEEECSSSCEEEEETTTTEEEEEE
T ss_pred EEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeE-EEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEe
Confidence 4455654 5554 4566899999998 2 22 444544556677 999999998777655544 55556 566 3333
Q ss_pred EeecC--CcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEec-----CCCCccce
Q 017520 152 LSYVN--GSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD-----GFYFANGV 224 (370)
Q Consensus 152 ~~~~~--g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~-----~~~~p~gi 224 (370)
..... ......+..++++++|++.++.. .++.|+.||..+++...... .......+
T Consensus 288 ~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~-----------------~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l 350 (380)
T 3iz6_a 288 NREPDRNDNELPIVTSVAFSISGRLLFAGY-----------------SNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCL 350 (380)
T ss_dssp CCCCSSSCCSSCSCSEEEECSSSSEEEEEC-----------------TTSCEEEEETTTCCEEEEECCSCSSCCCCCCEE
T ss_pred cccccccccccCceEEEEECCCCCEEEEEE-----------------CCCCEEEEECCCCceEEEEecccCCCCCceEEE
Confidence 22111 11223477899999998777744 35789999987665543321 12345789
Q ss_pred EEccCCCEEEEEeCCc-EEEEEeCCC
Q 017520 225 ALSRDEDYVVVCESWK-CRKYWLKGE 249 (370)
Q Consensus 225 ~~~~dg~~l~v~~~~~-l~~~~~~~~ 249 (370)
++++||+.|+.+...+ |..|++.+.
T Consensus 351 ~~s~dg~~l~sgs~D~~i~iW~~~~~ 376 (380)
T 3iz6_a 351 GLSSDGSALCTGSWDKNLKIWAFSGH 376 (380)
T ss_dssp EECSSSSEEEEECTTSCEEEEECCSS
T ss_pred EECCCCCEEEEeeCCCCEEEEecCCC
Confidence 9999999777666666 888887653
No 248
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=98.08 E-value=0.0032 Score=56.44 Aligned_cols=181 Identities=14% Similarity=0.127 Sum_probs=99.0
Q ss_pred CCcCCCcceEEcCC-Cc-EEEEecCCeEEEEe--CCe------EEEEEecCCCceeceEEcCCCcEEEEeCCCc-eEEEc
Q 017520 76 GSVNHPEDASMDKN-GV-IYTATRDGWIKRLQ--DGT------WVNWKFIDSQTLVGLTSTKEGHLIICDNANG-LHKVS 144 (370)
Q Consensus 76 ~~~~~P~~i~~d~~-G~-l~v~~~~g~I~~~~--~g~------~~~~~~~~~~p~~gl~~d~~G~L~v~~~~~g-i~~~~ 144 (370)
|.-..-.+|++.++ ++ |..++.||.|..|+ .++ ...+......+. +++++++|++.++....+ +..++
T Consensus 36 GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~-~~~~s~dg~~l~s~~~d~~i~~~~ 114 (340)
T 4aow_A 36 GHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVS-DVVISSDGQFALSGSWDGTLRLWD 114 (340)
T ss_dssp CCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEE-EEEECTTSSEEEEEETTSEEEEEE
T ss_pred CccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEE-EEEECCCCCEEEEEcccccceEEe
Confidence 44345678899876 55 45567899999998 322 122222344566 899999998666544444 44455
Q ss_pred -CCC-eEEEEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEec-C-CCC
Q 017520 145 -EDG-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD-G-FYF 220 (370)
Q Consensus 145 -~~g-~~~~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~-~-~~~ 220 (370)
..+ ....... . ......+...+++...++.+ .++.+..+|........... . ...
T Consensus 115 ~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~l~s~s-----------------~d~~~~~~d~~~~~~~~~~~~~~~~~ 173 (340)
T 4aow_A 115 LTTGTTTRRFVG-H---TKDVLSVAFSSDNRQIVSGS-----------------RDKTIKLWNTLGVCKYTVQDESHSEW 173 (340)
T ss_dssp TTTTEEEEEEEC-C---SSCEEEEEECTTSSCEEEEE-----------------TTSCEEEECTTSCEEEEECSSSCSSC
T ss_pred ecccceeeeecC-C---CCceeEEEEeecCccceeec-----------------CCCeEEEEEeCCCceEEEEeccccCc
Confidence 333 2221111 1 12344566677776555532 34667778776443332221 1 223
Q ss_pred ccceEEccCCCE-EEE-EeCCc-EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCCEEEEEe
Q 017520 221 ANGVALSRDEDY-VVV-CESWK-CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAII 281 (370)
Q Consensus 221 p~gi~~~~dg~~-l~v-~~~~~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~ 281 (370)
...+++++++.. +++ +...+ |..|++...+. ...+ ....+....++++++|++.++..
T Consensus 174 v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~--~~~~-~~h~~~v~~~~~s~~~~~l~s~s 234 (340)
T 4aow_A 174 VSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKL--KTNH-IGHTGYLNTVTVSPDGSLCASGG 234 (340)
T ss_dssp EEEEEECSCSSSCEEEEEETTSCEEEEETTTTEE--EEEE-CCCSSCEEEEEECTTSSEEEEEE
T ss_pred ccceEEccCCCCcEEEEEcCCCEEEEEECCCCce--eeEe-cCCCCcEEEEEECCCCCEEEEEe
Confidence 355677765432 333 34444 88888764321 1222 12233345678899998666543
No 249
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.08 E-value=0.00032 Score=74.16 Aligned_cols=143 Identities=10% Similarity=0.101 Sum_probs=88.0
Q ss_pred ceEEcCCC-cEEEEecCCeEE-EEe--CCeEEEEEecCCCceeceEEcCCCcE-EEEeCCCceEEEc-CCC-eEEEEeec
Q 017520 83 DASMDKNG-VIYTATRDGWIK-RLQ--DGTWVNWKFIDSQTLVGLTSTKEGHL-IICDNANGLHKVS-EDG-VENFLSYV 155 (370)
Q Consensus 83 ~i~~d~~G-~l~v~~~~g~I~-~~~--~g~~~~~~~~~~~p~~gl~~d~~G~L-~v~~~~~gi~~~~-~~g-~~~~~~~~ 155 (370)
++++. || .+++++.++.|+ .++ .++...+......+. .+++++||+. +.+.....++.++ .+| ...+....
T Consensus 342 ~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l~~~~~~~~-~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~ 419 (1045)
T 1k32_A 342 RRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVF-AMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSR 419 (1045)
T ss_dssp EECSS-SEEEEEEEETTEEEEEEEETTTCCEEECCCCCCSEE-EEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECS
T ss_pred eeeEc-CCCeEEEEECCCceEEEEECCCCCceEecCCcccee-eeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCC
Confidence 34555 55 344444466788 777 445554443334567 8999999974 4455445688888 667 55443221
Q ss_pred CCcccccccceEEcCCCcEE-EEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecCCCCccceEEccCCCEEE
Q 017520 156 NGSKLRFANDVVEASDGSLY-FTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVV 234 (370)
Q Consensus 156 ~g~~~~~~~~l~~d~~G~l~-v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~p~gi~~~~dg~~l~ 234 (370)
. ..+..++++|||+.. ++.....+.. .....+.|+.+|.++++...+.........+++++||+.++
T Consensus 420 ~----~~v~~~~~SpDG~~la~~~~~~~~~~--------~~~~~~~i~l~d~~~g~~~~l~~~~~~~~~~~~spdG~~l~ 487 (1045)
T 1k32_A 420 E----AMITDFTISDNSRFIAYGFPLKHGET--------DGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLY 487 (1045)
T ss_dssp S----SCCCCEEECTTSCEEEEEEEECSSTT--------CSCCEEEEEEEETTTTEEEECSCSSSBEEEEEECTTSCEEE
T ss_pred C----CCccceEECCCCCeEEEEecCccccc--------cCCCCCeEEEEECCCCcEEEeeCCCcccCCceEcCCCCEEE
Confidence 1 245788999999743 3322100000 00123579999998887665555555567789999999888
Q ss_pred EEeCC
Q 017520 235 VCESW 239 (370)
Q Consensus 235 v~~~~ 239 (370)
+....
T Consensus 488 ~~s~~ 492 (1045)
T 1k32_A 488 YLSYR 492 (1045)
T ss_dssp EEESC
T ss_pred EEecc
Confidence 87753
No 250
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=98.06 E-value=0.00044 Score=70.47 Aligned_cols=182 Identities=14% Similarity=0.125 Sum_probs=107.8
Q ss_pred CCCcceEEcCCCc-EEEEecCCeEEEEe--CCeEE---EEEecCCCceeceEEcCC--CcEEEEeCC-CceEEEc-CCC-
Q 017520 79 NHPEDASMDKNGV-IYTATRDGWIKRLQ--DGTWV---NWKFIDSQTLVGLTSTKE--GHLIICDNA-NGLHKVS-EDG- 147 (370)
Q Consensus 79 ~~P~~i~~d~~G~-l~v~~~~g~I~~~~--~g~~~---~~~~~~~~p~~gl~~d~~--G~L~v~~~~-~gi~~~~-~~g- 147 (370)
....+++++++|. +.+++.+|.|..|+ ++... .+....+... ++++.++ |+++++... +.|..++ .++
T Consensus 10 ~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~-~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~ 88 (753)
T 3jro_A 10 ELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVW-RVDWAHPKFGTILASCSYDGKVLIWKEENGR 88 (753)
T ss_dssp CCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEE-EEEECCTTSCSEEEEEETTSCEEEEEEETTE
T ss_pred ceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceE-EEEecCCCCCCEEEEEeCCCeEEEEECCCCc
Confidence 3456677887775 66777899999998 34332 2223344566 8999876 775554444 4455566 455
Q ss_pred eEEEEeecCCcccccccceEEcCC--CcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCe---EEEEecCCCCcc
Q 017520 148 VENFLSYVNGSKLRFANDVVEASD--GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNI---TTLVADGFYFAN 222 (370)
Q Consensus 148 ~~~~~~~~~g~~~~~~~~l~~d~~--G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~---~~~~~~~~~~p~ 222 (370)
....... .+. ...+..+++.++ |++.++.+ .++.|..||..++. ...+........
T Consensus 89 ~~~~~~~-~~h-~~~V~~v~~sp~~~~~~l~sgs-----------------~dg~I~vwdl~~~~~~~~~~~~~~~~~v~ 149 (753)
T 3jro_A 89 WSQIAVH-AVH-SASVNSVQWAPHEYGPLLLVAS-----------------SDGKVSVVEFKENGTTSPIIIDAHAIGVN 149 (753)
T ss_dssp EEEEEEE-CCC-SSCEEEEEECCGGGCSEEEEEE-----------------TTSEEEEEECCSSSCCCCEEEECCSSCEE
T ss_pred ccccccc-cCC-CCCeEEEEECCCCCCCEEEEEe-----------------CCCcEEEEEeecCCCcceeEeecCCCceE
Confidence 3332221 111 246788999998 87666643 35788888876552 222223334456
Q ss_pred ceEEcc-------------CCCEEEEEeCCc-EEEEEeCCCCCC-ceeeeccCCCCCCCceeECCC---CCEEEEE
Q 017520 223 GVALSR-------------DEDYVVVCESWK-CRKYWLKGERKG-KLETFAENLPGAPDNINLAPD---GTFWIAI 280 (370)
Q Consensus 223 gi~~~~-------------dg~~l~v~~~~~-l~~~~~~~~~~~-~~~~~~~~~~g~p~~i~~d~~---G~lwv~~ 280 (370)
.+++++ +++.++.+...+ |..|++...... ..........+....+++.++ |++.++.
T Consensus 150 ~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~ 225 (753)
T 3jro_A 150 SASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASV 225 (753)
T ss_dssp EEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEE
T ss_pred EEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEE
Confidence 788888 577777777777 889988654211 111111122333556778888 6655544
No 251
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.06 E-value=0.00073 Score=61.65 Aligned_cols=176 Identities=11% Similarity=0.133 Sum_probs=98.6
Q ss_pred cCCCcEEEEe-cCCeEEEEe-CCeEEEEEecCCCceeceEEcC----CC----cEEEEeCC---Cce--EEEc-CCC-eE
Q 017520 87 DKNGVIYTAT-RDGWIKRLQ-DGTWVNWKFIDSQTLVGLTSTK----EG----HLIICDNA---NGL--HKVS-EDG-VE 149 (370)
Q Consensus 87 d~~G~l~v~~-~~g~I~~~~-~g~~~~~~~~~~~p~~gl~~d~----~G----~L~v~~~~---~gi--~~~~-~~g-~~ 149 (370)
|+...+++++ ..++|+.++ +|+...... .++++ ++.+-+ .| .+++++.. +.| +.++ .++ ++
T Consensus 37 dp~~s~ii~t~k~~gL~Vydl~G~~l~~~~-~g~~n-nVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~ 114 (355)
T 3amr_A 37 TPQNSKLITTNKKSGLVVYSLDGKMLHSYN-TGKLN-NVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQ 114 (355)
T ss_dssp CGGGCEEEEEETTTEEEEEETTSCEEEEEC-CSCEE-EEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEE
T ss_pred CCCccEEEEEcCCCCEEEEcCCCcEEEEcc-CCCcc-cEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCcee
Confidence 4455667776 677899999 887665543 36666 655443 12 23555544 234 4456 344 55
Q ss_pred EEEee--cCCcccccccceEE--cCC-Cc--EEEEeCCCCCCCccceecccccCCCceEEEEeC---CCCeE-----EEE
Q 017520 150 NFLSY--VNGSKLRFANDVVE--ASD-GS--LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDP---SSNIT-----TLV 214 (370)
Q Consensus 150 ~~~~~--~~g~~~~~~~~l~~--d~~-G~--l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~---~t~~~-----~~~ 214 (370)
.+... ..+..+..+.+++. ++. |. +|+++. ++.+..|+. ..+++ +.
T Consensus 115 ~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k------------------~G~~~q~~l~~~~~g~~~~~lVR~- 175 (355)
T 3amr_A 115 SMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGK------------------EGEFEQYELKADKNGYISGKKVRA- 175 (355)
T ss_dssp ECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECS------------------SSEEEEEEEEECTTSCEEEEEEEE-
T ss_pred eccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECC------------------CCeEEEEEEEeCCCCcccceEEEE-
Confidence 44221 00122367888888 764 54 666643 255555433 22212 22
Q ss_pred ecCCCCccceEEccCCCEEEEEeCCc-EEEEEeCCCCCCceeee--c--cCCCCCCCceeE--CCCCC-EEEEEecC
Q 017520 215 ADGFYFANGVALSRDEDYVVVCESWK-CRKYWLKGERKGKLETF--A--ENLPGAPDNINL--APDGT-FWIAIIKL 283 (370)
Q Consensus 215 ~~~~~~p~gi~~~~dg~~l~v~~~~~-l~~~~~~~~~~~~~~~~--~--~~~~g~p~~i~~--d~~G~-lwv~~~~~ 283 (370)
+.-...+.|+++|+....||+++... ||+|+.+.....+.+.+ . ..+..-+.||++ .++|. ++++..++
T Consensus 176 f~lgsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG 252 (355)
T 3amr_A 176 FKMNSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQG 252 (355)
T ss_dssp EECSSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGG
T ss_pred ecCCCCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCC
Confidence 22235788999999888899999987 99999653321111111 1 112234677887 45554 55555554
No 252
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=98.05 E-value=0.0029 Score=57.27 Aligned_cols=148 Identities=9% Similarity=0.060 Sum_probs=88.6
Q ss_pred CCcceEEcCCCcEEEEecCCeEEEEe--CCe--EEEEE-e--cCCCceeceEEcCCCcEEEEeCCCc-eEEEcC-CC---
Q 017520 80 HPEDASMDKNGVIYTATRDGWIKRLQ--DGT--WVNWK-F--IDSQTLVGLTSTKEGHLIICDNANG-LHKVSE-DG--- 147 (370)
Q Consensus 80 ~P~~i~~d~~G~l~v~~~~g~I~~~~--~g~--~~~~~-~--~~~~p~~gl~~d~~G~L~v~~~~~g-i~~~~~-~g--- 147 (370)
.-.+++++++ .|..++.+|.|..++ .+. ..... . ...... ++++.++|+++++....+ |..++. .+
T Consensus 16 ~v~~~~~s~~-~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~-~v~~sp~~~~las~s~D~~v~iw~~~~~~~~ 93 (330)
T 2hes_X 16 KIWSFDFSQG-ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIR-SVAWRPHTSLLAAGSFDSTVSIWAKEESADR 93 (330)
T ss_dssp CEEEEEEETT-EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEE-EEEECTTSSEEEEEETTSCEEEEEC------
T ss_pred ceeeeccCCC-EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEE-EEEECCCCCEEEEEeCCCcEEEEEcccCcCc
Confidence 3456777766 667777899999998 332 22222 1 233456 899999998766544444 444442 11
Q ss_pred ---eEEEEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCC-C---eE-EEEecCCC
Q 017520 148 ---VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSS-N---IT-TLVADGFY 219 (370)
Q Consensus 148 ---~~~~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t-~---~~-~~~~~~~~ 219 (370)
.+.+ ....+. ...+..++++++|+..++.+ .++.|..+|... + +. ..+.....
T Consensus 94 ~~~~~~~-~~~~~h-~~~V~~v~~sp~g~~las~s-----------------~D~~v~iwd~~~~~~~~~~~~~~~~h~~ 154 (330)
T 2hes_X 94 TFEMDLL-AIIEGH-ENEVKGVAWSNDGYYLATCS-----------------RDKSVWIWETDESGEEYECISVLQEHSQ 154 (330)
T ss_dssp -CCCEEE-EEEC-----CEEEEEECTTSCEEEEEE-----------------TTSCEEEEECCTTCCCCEEEEEECCCSS
T ss_pred cccceeE-EEEcCC-CCcEEEEEECCCCCEEEEEe-----------------CCCEEEEEeccCCCCCeEEEEEeccCCC
Confidence 1111 111221 23678899999998777643 356788888732 2 22 22222334
Q ss_pred CccceEEccCCCEEEEEeCCc-EEEEEeCC
Q 017520 220 FANGVALSRDEDYVVVCESWK-CRKYWLKG 248 (370)
Q Consensus 220 ~p~gi~~~~dg~~l~v~~~~~-l~~~~~~~ 248 (370)
....++++|+++.++.+...+ |..|+...
T Consensus 155 ~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~ 184 (330)
T 2hes_X 155 DVKHVIWHPSEALLASSSYDDTVRIWKDYD 184 (330)
T ss_dssp CEEEEEECSSSSEEEEEETTSCEEEEEEET
T ss_pred ceEEEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 467899999999777777777 77777643
No 253
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=98.04 E-value=0.0015 Score=59.07 Aligned_cols=93 Identities=10% Similarity=0.061 Sum_probs=58.7
Q ss_pred CCCcceEEcCC---C-cEEEEecCCeEEEEe--C-CeE--EEEEecCCCceeceEEcCCCcEEEE-eCCCceEEEc-CCC
Q 017520 79 NHPEDASMDKN---G-VIYTATRDGWIKRLQ--D-GTW--VNWKFIDSQTLVGLTSTKEGHLIIC-DNANGLHKVS-EDG 147 (370)
Q Consensus 79 ~~P~~i~~d~~---G-~l~v~~~~g~I~~~~--~-g~~--~~~~~~~~~p~~gl~~d~~G~L~v~-~~~~gi~~~~-~~g 147 (370)
....++++.++ | .|.+++.+|.|..|+ + +.. ..+....+... ++++.++|+++++ ..++.|..++ .++
T Consensus 40 ~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~s~~~dg~v~iwd~~~~ 118 (368)
T 3mmy_A 40 DSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVL-DVCWSDDGSKVFTASCDKTAKMWDLSSN 118 (368)
T ss_dssp SCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEE-EEEECTTSSEEEEEETTSEEEEEETTTT
T ss_pred CceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEE-EEEECcCCCEEEEEcCCCcEEEEEcCCC
Confidence 45678899887 4 566777899999999 3 443 33444455667 9999999975554 4344466666 555
Q ss_pred -eEEEEeecCCcccccccceEE--cCCCcEEEE
Q 017520 148 -VENFLSYVNGSKLRFANDVVE--ASDGSLYFT 177 (370)
Q Consensus 148 -~~~~~~~~~g~~~~~~~~l~~--d~~G~l~v~ 177 (370)
...+... . ..+..+++ +++|+++++
T Consensus 119 ~~~~~~~~-~----~~v~~~~~~~~~~~~~l~~ 146 (368)
T 3mmy_A 119 QAIQIAQH-D----APVKTIHWIKAPNYSCVMT 146 (368)
T ss_dssp EEEEEEEC-S----SCEEEEEEEECSSCEEEEE
T ss_pred Cceeeccc-c----CceEEEEEEeCCCCCEEEE
Confidence 3332221 1 24667777 777765554
No 254
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=98.03 E-value=0.0016 Score=59.27 Aligned_cols=174 Identities=10% Similarity=0.046 Sum_probs=100.4
Q ss_pred cEEEEecCCeEEEEe--CCeE-EEEEecCCCceeceEEc-------CCCcEEEEeCCCceEEEc-CCC--eEEEEeecCC
Q 017520 91 VIYTATRDGWIKRLQ--DGTW-VNWKFIDSQTLVGLTST-------KEGHLIICDNANGLHKVS-EDG--VENFLSYVNG 157 (370)
Q Consensus 91 ~l~v~~~~g~I~~~~--~g~~-~~~~~~~~~p~~gl~~d-------~~G~L~v~~~~~gi~~~~-~~g--~~~~~~~~~g 157 (370)
.+..|..+|.|..|+ +++. ..+. ...+. .+.+. .|+.+.+-+....+..++ .++ +..+.. +
T Consensus 50 ~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~-~~~~~~~~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~---~ 123 (343)
T 3lrv_A 50 VCMCRCEDGALHFTQLKDSKTITTIT--TPNPR-TGGEHPAIISRGPCNRLLLLYPGNQITILDSKTNKVLREIEV---D 123 (343)
T ss_dssp EEEEEEETTEEEEEEESSSSCEEEEE--EECCC-TTCCCCSEEEECSTTEEEEEETTTEEEEEETTTCCEEEEEEC---C
T ss_pred EEEEECCCCcEEEEECCCCcEEEEEe--cCCce-eeeeCCceEEecCCCeEEEEEccCceEEeecCCcceeEEeec---C
Confidence 566777999999999 5543 3322 12223 43333 344444444333343344 233 222211 1
Q ss_pred cccccccceEEcC--CCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecC--CCCccceEEccCCCEE
Q 017520 158 SKLRFANDVVEAS--DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG--FYFANGVALSRDEDYV 233 (370)
Q Consensus 158 ~~~~~~~~l~~d~--~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~--~~~p~gi~~~~dg~~l 233 (370)
. ...+..+++++ +|+++++.+ .++.|..||..+++....... ......+++++|++.+
T Consensus 124 ~-~~~v~~~~~~~~~~~~~l~s~s-----------------~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~l 185 (343)
T 3lrv_A 124 S-ANEIIYMYGHNEVNTEYFIWAD-----------------NRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLL 185 (343)
T ss_dssp C-SSCEEEEECCC---CCEEEEEE-----------------TTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEE
T ss_pred C-CCCEEEEEcCCCCCCCEEEEEe-----------------CCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEE
Confidence 0 12477889999 898777643 357899999887776443322 2246789999999966
Q ss_pred EEEeCCc-EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCCEEEEEecCchhHHH
Q 017520 234 VVCESWK-CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMK 289 (370)
Q Consensus 234 ~v~~~~~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~ 289 (370)
..+...+ |..||+...+.- ...+.....+....++++++|++.++...+...++|
T Consensus 186 asg~~dg~i~iwd~~~~~~~-~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~~v~iwd 241 (343)
T 3lrv_A 186 ALYSPDGILDVYNLSSPDQA-SSRFPVDEEAKIKEVKFADNGYWMVVECDQTVVCFD 241 (343)
T ss_dssp EEECTTSCEEEEESSCTTSC-CEECCCCTTSCEEEEEECTTSSEEEEEESSBEEEEE
T ss_pred EEEcCCCEEEEEECCCCCCC-ccEEeccCCCCEEEEEEeCCCCEEEEEeCCeEEEEE
Confidence 6666666 999998754321 022221133445678899999877666555444444
No 255
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.03 E-value=0.0003 Score=74.36 Aligned_cols=171 Identities=9% Similarity=0.041 Sum_probs=104.8
Q ss_pred cceEEcCCCcEEEEecCCeEEEEe-C-CeEEEEEe-----------cCCCceeceEEc-CCCc-EEEEeCCCceEEEc-C
Q 017520 82 EDASMDKNGVIYTATRDGWIKRLQ-D-GTWVNWKF-----------IDSQTLVGLTST-KEGH-LIICDNANGLHKVS-E 145 (370)
Q Consensus 82 ~~i~~d~~G~l~v~~~~g~I~~~~-~-g~~~~~~~-----------~~~~p~~gl~~d-~~G~-L~v~~~~~gi~~~~-~ 145 (370)
..+++++||...+...++.|+.++ + +.+..+.. ....+. +++++ +||+ |.++. ...++.++ .
T Consensus 248 ~~~~~SpDG~~la~~~~~~i~~~d~~~~~l~~l~~~~~~~~~~~~~~~~~v~-~~~~S~pdG~~la~~~-~~~i~~~~~~ 325 (1045)
T 1k32_A 248 YPRHLNTDGRRILFSKGGSIYIFNPDTEKIEKIEIGDLESPEDRIISIPSKF-AEDFSPLDGDLIAFVS-RGQAFIQDVS 325 (1045)
T ss_dssp CEEEEEESSSCEEEEETTEEEEECTTTCCEEECCCCCCCBCCSEEEECGGGG-EEEEEECGGGCEEEEE-TTEEEEECTT
T ss_pred ceeeEcCCCCEEEEEeCCEEEEecCCceEeeeeccCcccccccccccccccc-eeeecCCCCCEEEEEE-cCEEEEEcCC
Confidence 345777777633333577888887 3 33332211 111356 89999 9996 44444 55677777 4
Q ss_pred CC-eEEEEeecCCcccccccceEEcCCCc-EEEEeCCCCCCCccceecccccCCCceEE-EEeCCCCeEEEEecCCCCcc
Q 017520 146 DG-VENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLL-KYDPSSNITTLVADGFYFAN 222 (370)
Q Consensus 146 ~g-~~~~~~~~~g~~~~~~~~l~~d~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~l~-~~d~~t~~~~~~~~~~~~p~ 222 (370)
++ ...+. ......+..+++. ||+ ++++.. ...++ .+|.++++.+.+........
T Consensus 326 ~~~~~~~~----~~~~~~~~~~~~s-dg~~l~~~s~------------------~~~l~~~~d~~~~~~~~l~~~~~~~~ 382 (1045)
T 1k32_A 326 GTYVLKVP----EPLRIRYVRRGGD-TKVAFIHGTR------------------EGDFLGIYDYRTGKAEKFEENLGNVF 382 (1045)
T ss_dssp SSBEEECS----CCSCEEEEEECSS-SEEEEEEEET------------------TEEEEEEEETTTCCEEECCCCCCSEE
T ss_pred CCceEEcc----CCCcceEEeeeEc-CCCeEEEEEC------------------CCceEEEEECCCCCceEecCCcccee
Confidence 45 33321 1111145567777 775 444321 35788 89988777666553334567
Q ss_pred ceEEccCCCEEEEEeCCc-EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCCEEEEE
Q 017520 223 GVALSRDEDYVVVCESWK-CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAI 280 (370)
Q Consensus 223 gi~~~~dg~~l~v~~~~~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~ 280 (370)
.++++|||+.++++...+ |+.+++++. +.........+....+++++||+..+..
T Consensus 383 ~~~~SpDG~~la~~~~~~~v~~~d~~tg---~~~~~~~~~~~~v~~~~~SpDG~~la~~ 438 (1045)
T 1k32_A 383 AMGVDRNGKFAVVANDRFEIMTVDLETG---KPTVIERSREAMITDFTISDNSRFIAYG 438 (1045)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEETTTC---CEEEEEECSSSCCCCEEECTTSCEEEEE
T ss_pred eeEECCCCCEEEEECCCCeEEEEECCCC---ceEEeccCCCCCccceEECCCCCeEEEE
Confidence 899999999888887776 999998654 2333332333345678999999855443
No 256
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.02 E-value=0.0033 Score=57.15 Aligned_cols=179 Identities=13% Similarity=0.130 Sum_probs=101.8
Q ss_pred CCcceEEcCCCcEEEEecCCeEEEEeC-C-eEEEEEecC---C-CceeceEEcCCCcEEEEeCCCceEEEcCCC--eEEE
Q 017520 80 HPEDASMDKNGVIYTATRDGWIKRLQD-G-TWVNWKFID---S-QTLVGLTSTKEGHLIICDNANGLHKVSEDG--VENF 151 (370)
Q Consensus 80 ~P~~i~~d~~G~l~v~~~~g~I~~~~~-g-~~~~~~~~~---~-~p~~gl~~d~~G~L~v~~~~~gi~~~~~~g--~~~~ 151 (370)
...+|++..++.+|+....|.|++-.+ | .++...... . ... +|++++ +++|++....+|++-...| ++.+
T Consensus 37 ~~~~v~~~~~~~~~~~G~~g~i~~s~DgG~tW~~~~~~~~~~~~~~~-~i~~~~-~~~~~~g~~g~i~~S~DgG~tW~~~ 114 (327)
T 2xbg_A 37 TILDMSFIDRHHGWLVGVNATLMETRDGGQTWEPRTLVLDHSDYRFN-SVSFQG-NEGWIVGEPPIMLHTTDGGQSWSQI 114 (327)
T ss_dssp CEEEEEESSSSCEEEEETTTEEEEESSTTSSCEECCCCCSCCCCEEE-EEEEET-TEEEEEEETTEEEEESSTTSSCEEC
T ss_pred cEEEEEECCCCcEEEEcCCCeEEEeCCCCCCCeECCCCCCCCCccEE-EEEecC-CeEEEEECCCeEEEECCCCCCceEC
Confidence 456677777788898777888888763 4 355443211 2 234 788875 7888876555566644445 5543
Q ss_pred EeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecCC-CCccceEEccCC
Q 017520 152 LSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGF-YFANGVALSRDE 230 (370)
Q Consensus 152 ~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~-~~p~gi~~~~dg 230 (370)
... ...+ ..+..+++.+++++|+... .+.|++-+-....++.+.... ....++++++++
T Consensus 115 ~~~-~~~~-~~~~~i~~~~~~~~~~~~~------------------~g~v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~ 174 (327)
T 2xbg_A 115 PLD-PKLP-GSPRLIKALGNGSAEMITN------------------VGAIYRTKDSGKNWQALVQEAIGVMRNLNRSPSG 174 (327)
T ss_dssp CCC-TTCS-SCEEEEEEEETTEEEEEET------------------TCCEEEESSTTSSEEEEECSCCCCEEEEEECTTS
T ss_pred ccc-cCCC-CCeEEEEEECCCCEEEEeC------------------CccEEEEcCCCCCCEEeecCCCcceEEEEEcCCC
Confidence 221 1111 2345677777788888743 256777654444555544322 234567888888
Q ss_pred CEEEEEeCCc-EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCCEEEEEecC
Q 017520 231 DYVVVCESWK-CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKL 283 (370)
Q Consensus 231 ~~l~v~~~~~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~ 283 (370)
+ +|+....+ +++-+-.+.. ..+......+.....++++++|++|+....+
T Consensus 175 ~-~~~~g~~G~~~~S~d~gG~--tW~~~~~~~~~~~~~~~~~~~g~~~~~~~~G 225 (327)
T 2xbg_A 175 E-YVAVSSRGSFYSTWEPGQT--AWEPHNRTTSRRLHNMGFTPDGRLWMIVNGG 225 (327)
T ss_dssp C-EEEEETTSSEEEEECTTCS--SCEEEECCSSSCEEEEEECTTSCEEEEETTT
T ss_pred c-EEEEECCCcEEEEeCCCCC--ceeECCCCCCCccceeEECCCCCEEEEeCCc
Confidence 7 44444444 7776522111 2222211112223457778889999887554
No 257
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.01 E-value=0.00049 Score=63.44 Aligned_cols=195 Identities=13% Similarity=0.072 Sum_probs=97.2
Q ss_pred CcceEEcCCCcE-EEE-ec--CCeEEEEe--CCeEEEEEecCCCceeceEEcCCCc-EEEEeCCCceEEEc-CCC-eEEE
Q 017520 81 PEDASMDKNGVI-YTA-TR--DGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGH-LIICDNANGLHKVS-EDG-VENF 151 (370)
Q Consensus 81 P~~i~~d~~G~l-~v~-~~--~g~I~~~~--~g~~~~~~~~~~~p~~gl~~d~~G~-L~v~~~~~gi~~~~-~~g-~~~~ 151 (370)
+.++++.+||.. .+. +. +..|+.++ +++...+.........++++++||+ |+.+.....|+.++ .++ .+.+
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~ 117 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVI 117 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEE
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEE
Confidence 556688888863 333 32 34788888 5665554333333230378899996 54555445688888 555 4444
Q ss_pred EeecCCcccccccceEEcCCC---cEEEEeCCCCCCCccceeccc---ccCCCceEEEEeCCCCeEEEEecCCCCccceE
Q 017520 152 LSYVNGSKLRFANDVVEASDG---SLYFTVSSSKYLPHEYCLDIL---EGKPHGQLLKYDPSSNITTLVADGFYFANGVA 225 (370)
Q Consensus 152 ~~~~~g~~~~~~~~l~~d~~G---~l~v~d~~~~~~~~~~~~~~~---~~~~~g~l~~~d~~t~~~~~~~~~~~~p~gi~ 225 (370)
.....+. ...-..|++.... .+|.... .+....-...+. .......|+.+|.++++.+.+.........++
T Consensus 118 ~~~~~~~-~~~g~~l~~~~~~~~~~~~~~~~--~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~ 194 (396)
T 3c5m_A 118 YTVDEEW-KGYGTWVANSDCTKLVGIEILKR--DWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDTAWLGHPI 194 (396)
T ss_dssp EECCTTE-EEEEEEEECTTSSEEEEEEEEGG--GCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEESSCEEEEE
T ss_pred Eeccccc-CCCCCEEEeccCCcccccccccc--ccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeeccCCcccccce
Confidence 3321110 0000011111000 0010000 000000000000 01244689999998888776665445566788
Q ss_pred Ecc-CCCEEEEEeCC------c-EEEEEeCCCCCCceeeeccCCCC-CCCceeECCCCC-EEEEEe
Q 017520 226 LSR-DEDYVVVCESW------K-CRKYWLKGERKGKLETFAENLPG-APDNINLAPDGT-FWIAII 281 (370)
Q Consensus 226 ~~~-dg~~l~v~~~~------~-l~~~~~~~~~~~~~~~~~~~~~g-~p~~i~~d~~G~-lwv~~~ 281 (370)
+++ |++.+++.... . |+.+++++.. ...+....+. .+..+++++||+ |+.+..
T Consensus 195 ~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~---~~~l~~~~~~~~~~~~~~spdg~~l~~~~~ 257 (396)
T 3c5m_A 195 YRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSN---VRKIKEHAEGESCTHEFWIPDGSAMAYVSY 257 (396)
T ss_dssp EETTEEEEEEEEECSCSSSCSCCCEEEETTSCC---CEESSCCCTTEEEEEEEECTTSSCEEEEEE
T ss_pred ECCCCCCEEEEEecCCCCCCCceEEEEECCCCc---eeEeeccCCCccccceEECCCCCEEEEEec
Confidence 999 77756554321 2 8888876542 2222211111 233467899996 555543
No 258
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.01 E-value=1.9e-05 Score=73.45 Aligned_cols=139 Identities=15% Similarity=0.120 Sum_probs=61.9
Q ss_pred EEcCCCcEEEEecCCeEEEEe--CCeEEEEEecCCCceeceEEcCCCcEEEEe-CCCceEEEc-CCC-eEEEEeecCCcc
Q 017520 85 SMDKNGVIYTATRDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGHLIICD-NANGLHKVS-EDG-VENFLSYVNGSK 159 (370)
Q Consensus 85 ~~d~~G~l~v~~~~g~I~~~~--~g~~~~~~~~~~~p~~gl~~d~~G~L~v~~-~~~gi~~~~-~~g-~~~~~~~~~g~~ 159 (370)
+++ ++.||+++.+|.|+.++ +|+...-... +... +..+..+|.+|++. ..+.++.++ .+| .........+..
T Consensus 6 ~v~-~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-~~~~-s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~ 82 (369)
T 2hz6_A 6 TLP-ETLLFVSTLDGSLHAVSKRTGSIKWTLKE-DPVL-QVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPEL 82 (369)
T ss_dssp --C-TTEEEEEETTSEEEEEETTTCCEEEEEEC-CCSC-CCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHH
T ss_pred eee-CCEEEEEcCCCEEEEEECCCCCEEEEecC-CCce-ecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccc
Confidence 554 68999999999999999 7876543333 3333 33333567777764 345688888 577 322111100000
Q ss_pred cccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecCCCCccceEEccCCCEEEEEeCC
Q 017520 160 LRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESW 239 (370)
Q Consensus 160 ~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~p~gi~~~~dg~~l~v~~~~ 239 (370)
. ....++..++.+|++. .++.|+.+|.++++...... .......+++++.+|++...
T Consensus 83 ~--~~sp~~~~~~~v~~g~------------------~dg~v~a~D~~tG~~~w~~~---~~~~~~~~p~~~~v~~~~~d 139 (369)
T 2hz6_A 83 V--QASPCRSSDGILYMGK------------------KQDIWYVIDLLTGEKQQTLS---SAFADSLSPSTSLLYLGRTE 139 (369)
T ss_dssp H--TTCSCC-----CCCCE------------------EEEEEEEECCC-------------------------EEEEEEE
T ss_pred c--ccCceEecCCEEEEEe------------------CCCEEEEEECCCCcEEEEec---CCCcccccccCCEEEEEecC
Confidence 0 0011222356777653 23679999998876543221 11223445577778888766
Q ss_pred c-EEEEEeCCC
Q 017520 240 K-CRKYWLKGE 249 (370)
Q Consensus 240 ~-l~~~~~~~~ 249 (370)
+ |+.+|.++.
T Consensus 140 g~v~a~d~~tG 150 (369)
T 2hz6_A 140 YTITMYDTKTR 150 (369)
T ss_dssp EEEECCCSSSS
T ss_pred CEEEEEECCCC
Confidence 6 899987654
No 259
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.00 E-value=0.002 Score=64.76 Aligned_cols=109 Identities=13% Similarity=0.178 Sum_probs=67.0
Q ss_pred CCcEEEEecCCeEEEEe--CCeEEEEEecCC------------CceeceEEcCCCcEEEEeCCCceEEEc-CCC-eEEEE
Q 017520 89 NGVIYTATRDGWIKRLQ--DGTWVNWKFIDS------------QTLVGLTSTKEGHLIICDNANGLHKVS-EDG-VENFL 152 (370)
Q Consensus 89 ~G~l~v~~~~g~I~~~~--~g~~~~~~~~~~------------~p~~gl~~d~~G~L~v~~~~~gi~~~~-~~g-~~~~~ 152 (370)
+|.||+++.++.|+.+| +|+...-..... ... +++++ ++.||++.....|+.+| ++| ...-.
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-~~a~~-~~~v~v~~~dg~l~alD~~tG~~~W~~ 154 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNR-GVALW-KGKVYVGAWDGRLIALDAATGKEVWHQ 154 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCC-CCEEE-TTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCC-CceEE-CCEEEEEcCCCEEEEEECCCCCEEeee
Confidence 78999999888999999 787654332221 113 56665 68999998777899999 688 33322
Q ss_pred eecCCc-c-cccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEE
Q 017520 153 SYVNGS-K-LRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITT 212 (370)
Q Consensus 153 ~~~~g~-~-~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~ 212 (370)
...... . ........+. +|.+|++....++ ...+.|+.+|.++++..
T Consensus 155 ~~~~~~~~~~~~~~~p~v~-~~~v~v~~~~~~~------------~~~g~v~a~D~~tG~~~ 203 (677)
T 1kb0_A 155 NTFEGQKGSLTITGAPRVF-KGKVIIGNGGAEY------------GVRGYITAYDAETGERK 203 (677)
T ss_dssp ETTTTCCSSCBCCSCCEEE-TTEEEECCBCTTT------------CCBCEEEEEETTTCCEE
T ss_pred cCCcCcCcCcccccCcEEE-CCEEEEEeccccc------------CCCCEEEEEECCCCcEE
Confidence 211010 0 0111112332 5789988653211 12578999999888764
No 260
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=97.99 E-value=0.0038 Score=56.44 Aligned_cols=149 Identities=7% Similarity=-0.002 Sum_probs=87.4
Q ss_pred CCcceEEcCCCcEE-EEecCCeEEEEe-CC--------e-EEEEEecCCCceeceEEcCCCcEEEEeCC-CceEEEcC-C
Q 017520 80 HPEDASMDKNGVIY-TATRDGWIKRLQ-DG--------T-WVNWKFIDSQTLVGLTSTKEGHLIICDNA-NGLHKVSE-D 146 (370)
Q Consensus 80 ~P~~i~~d~~G~l~-v~~~~g~I~~~~-~g--------~-~~~~~~~~~~p~~gl~~d~~G~L~v~~~~-~gi~~~~~-~ 146 (370)
...++++.++|.+. .++.++.|..|+ .. + ...+....+... +++++++|+++++... +.|..++. .
T Consensus 60 ~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~-~v~~sp~g~~las~s~D~~v~iwd~~~ 138 (330)
T 2hes_X 60 AIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVK-GVAWSNDGYYLATCSRDKSVWIWETDE 138 (330)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEE-EEEECTTSCEEEEEETTSCEEEEECCT
T ss_pred CEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEE-EEEECCCCCEEEEEeCCCEEEEEeccC
Confidence 45678899888654 566889999887 21 1 112223344566 8999999986665444 44555552 2
Q ss_pred -C--eEEEEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeE---EEEecCCCC
Q 017520 147 -G--VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNIT---TLVADGFYF 220 (370)
Q Consensus 147 -g--~~~~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~---~~~~~~~~~ 220 (370)
+ .+.+. ...+. ...++.+++.|+|++.++.+ .++.|..+|..++.. ..+......
T Consensus 139 ~~~~~~~~~-~~~~h-~~~v~~v~~~p~~~~l~s~s-----------------~D~~i~iW~~~~~~~~~~~~~~~h~~~ 199 (330)
T 2hes_X 139 SGEEYECIS-VLQEH-SQDVKHVIWHPSEALLASSS-----------------YDDTVRIWKDYDDDWECVAVLNGHEGT 199 (330)
T ss_dssp TCCCCEEEE-EECCC-SSCEEEEEECSSSSEEEEEE-----------------TTSCEEEEEEETTEEEEEEEECCCSSC
T ss_pred CCCCeEEEE-EeccC-CCceEEEEECCCCCEEEEEc-----------------CCCeEEEEECCCCCeeEEEEccCCCCc
Confidence 2 22221 11221 13578899999998777754 346677777654422 222222334
Q ss_pred ccceEEccC--CCEEEEEeCCc-EEEEEeCC
Q 017520 221 ANGVALSRD--EDYVVVCESWK-CRKYWLKG 248 (370)
Q Consensus 221 p~gi~~~~d--g~~l~v~~~~~-l~~~~~~~ 248 (370)
...++++++ +..+..+...+ |..|++.+
T Consensus 200 v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~ 230 (330)
T 2hes_X 200 VWSSDFDKTEGVFRLCSGSDDSTVRVWKYMG 230 (330)
T ss_dssp EEEEEECCSSSSCEEEEEETTSCEEEEEEEE
T ss_pred EEEEEecCCCCeeEEEEEeCCCeEEEEEecC
Confidence 567889998 55566666666 77777653
No 261
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=97.95 E-value=0.0022 Score=58.98 Aligned_cols=148 Identities=8% Similarity=0.036 Sum_probs=88.2
Q ss_pred CCCcceEEcC-CCc-EEEEecCCeEEEEe--CCeE-EEEE-------------ecCCCceeceEEcC-CCcEEEE-eCCC
Q 017520 79 NHPEDASMDK-NGV-IYTATRDGWIKRLQ--DGTW-VNWK-------------FIDSQTLVGLTSTK-EGHLIIC-DNAN 138 (370)
Q Consensus 79 ~~P~~i~~d~-~G~-l~v~~~~g~I~~~~--~g~~-~~~~-------------~~~~~p~~gl~~d~-~G~L~v~-~~~~ 138 (370)
....++++.+ +|. |.+++.+|.|..|+ +++. ..+. ....... ++++.+ +++++++ ...+
T Consensus 44 ~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~l~s~~~d~ 122 (408)
T 4a11_B 44 GGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVE-TVQWYPHDTGMFTSSSFDK 122 (408)
T ss_dssp SCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEE-EEEECTTCTTCEEEEETTS
T ss_pred CcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEE-EEEEccCCCcEEEEEeCCC
Confidence 3567789988 776 45666899999999 3321 1111 1233456 899998 5655554 4344
Q ss_pred ceEEEc-CCC-eEEEEeecCCcccccccceEEcC---CCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEE
Q 017520 139 GLHKVS-EDG-VENFLSYVNGSKLRFANDVVEAS---DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTL 213 (370)
Q Consensus 139 gi~~~~-~~g-~~~~~~~~~g~~~~~~~~l~~d~---~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~ 213 (370)
.|..++ .++ ....... . ..+..+.+.+ ++.+.++.. .++.|..||..+++...
T Consensus 123 ~i~iwd~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~v~~~d~~~~~~~~ 180 (408)
T 4a11_B 123 TLKVWDTNTLQTADVFNF-E----ETVYSHHMSPVSTKHCLVAVGT-----------------RGPKVQLCDLKSGSCSH 180 (408)
T ss_dssp EEEEEETTTTEEEEEEEC-S----SCEEEEEECSSCSSCCEEEEEE-----------------SSSSEEEEESSSSCCCE
T ss_pred eEEEeeCCCCccceeccC-C----CceeeeEeecCCCCCcEEEEEc-----------------CCCeEEEEeCCCcceee
Confidence 466666 555 2222221 1 2345566665 344555432 34778899987665433
Q ss_pred Eec-CCCCccceEEccCCCE-EEEEeCCc-EEEEEeCCC
Q 017520 214 VAD-GFYFANGVALSRDEDY-VVVCESWK-CRKYWLKGE 249 (370)
Q Consensus 214 ~~~-~~~~p~gi~~~~dg~~-l~v~~~~~-l~~~~~~~~ 249 (370)
... .......++++++++. ++.+...+ |..|++...
T Consensus 181 ~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~ 219 (408)
T 4a11_B 181 ILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRA 219 (408)
T ss_dssp EECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCS
T ss_pred eecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCC
Confidence 333 3344578999999985 55666666 899987543
No 262
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=97.94 E-value=0.0033 Score=63.45 Aligned_cols=182 Identities=8% Similarity=0.052 Sum_probs=98.5
Q ss_pred ceEEcCCCcE-EEE-ecCC----eEEEEe--CCeEEEEEecCCCceeceEEcCCCc-EEEEeCCCc--------------
Q 017520 83 DASMDKNGVI-YTA-TRDG----WIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGH-LIICDNANG-------------- 139 (370)
Q Consensus 83 ~i~~d~~G~l-~v~-~~~g----~I~~~~--~g~~~~~~~~~~~p~~gl~~d~~G~-L~v~~~~~g-------------- 139 (370)
++++.+||+. .++ +..| .|+.++ +|+............ ++++.+||+ |+.+.....
T Consensus 129 ~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~-~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~ 207 (710)
T 2xdw_A 129 GYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFS-CMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLH 207 (710)
T ss_dssp EEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSC-CEEECTTSSEEEEEECCCCSSCCSSSCCCCCCC
T ss_pred EEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcccc-eEEEEeCCCEEEEEEECCccccccccccccCCC
Confidence 4678888863 333 3333 788888 666544322222245 799999996 666554333
Q ss_pred --eEEEc-CCC-e--EEEEeecCCcccccccceEEcCCCc-EEEEeCCCCCCCccceecccccCCCceEEEEeCCC----
Q 017520 140 --LHKVS-EDG-V--ENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSS---- 208 (370)
Q Consensus 140 --i~~~~-~~g-~--~~~~~~~~g~~~~~~~~l~~d~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t---- 208 (370)
|++++ .++ . ..+... ... .....++.+++||+ |.++.... ......|+.+|.++
T Consensus 208 ~~v~~~~l~t~~~~~~~v~~~-~~~-~~~~~~~~~SpDg~~l~~~~~~~-------------~~~~~~l~~~d~~~~~~~ 272 (710)
T 2xdw_A 208 QKLYYHVLGTDQSEDILCAEF-PDE-PKWMGGAELSDDGRYVLLSIREG-------------CDPVNRLWYCDLQQESNG 272 (710)
T ss_dssp CEEEEEETTSCGGGCEEEECC-TTC-TTCEEEEEECTTSCEEEEEEECS-------------SSSCCEEEEEEGGGSSSS
T ss_pred CEEEEEECCCCcccceEEecc-CCC-CeEEEEEEEcCCCCEEEEEEEcc-------------CCCccEEEEEECcccccc
Confidence 77777 344 2 222221 111 12345788999996 55543210 00145788898765
Q ss_pred --C--eEEEEecCCCCccceEEccCCCEEEEEeCCc-----EEEEEeCCCCCCceeeeccCCC-CCCCceeECCCCCEEE
Q 017520 209 --N--ITTLVADGFYFANGVALSRDEDYVVVCESWK-----CRKYWLKGERKGKLETFAENLP-GAPDNINLAPDGTFWI 278 (370)
Q Consensus 209 --~--~~~~~~~~~~~p~gi~~~~dg~~l~v~~~~~-----l~~~~~~~~~~~~~~~~~~~~~-g~p~~i~~d~~G~lwv 278 (370)
+ ..+.+...... ....+++||+.+|+....+ |++++++++.....+.+....+ ....++....++.+++
T Consensus 273 ~~~~~~~~~l~~~~~~-~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~ 351 (710)
T 2xdw_A 273 ITGILKWVKLIDNFEG-EYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVL 351 (710)
T ss_dssp SCSSCCCEEEECSSSS-CEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEE
T ss_pred cCCccceEEeeCCCCc-EEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEE
Confidence 4 34544433222 2235788998888775421 8999987643212233332222 1233455555566666
Q ss_pred EEe
Q 017520 279 AII 281 (370)
Q Consensus 279 ~~~ 281 (370)
...
T Consensus 352 ~~~ 354 (710)
T 2xdw_A 352 CYL 354 (710)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 263
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=97.94 E-value=0.0011 Score=60.08 Aligned_cols=198 Identities=12% Similarity=0.041 Sum_probs=107.5
Q ss_pred CCcceEEcCCCc-EEEEecCCeEEEEe--CCeEEEEEecCCCceeceEE--cCCCcEEEE-eCCCceEEEc-CCC--eEE
Q 017520 80 HPEDASMDKNGV-IYTATRDGWIKRLQ--DGTWVNWKFIDSQTLVGLTS--TKEGHLIIC-DNANGLHKVS-EDG--VEN 150 (370)
Q Consensus 80 ~P~~i~~d~~G~-l~v~~~~g~I~~~~--~g~~~~~~~~~~~p~~gl~~--d~~G~L~v~-~~~~gi~~~~-~~g--~~~ 150 (370)
...++++.++|. |++++.+|.|..|+ +++............ ++++ +++++++++ ..++.|..++ .++ ...
T Consensus 88 ~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~ 166 (368)
T 3mmy_A 88 PVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAPVK-TIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMV 166 (368)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEE-EEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEE
T ss_pred CEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCceeeccccCceE-EEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEE
Confidence 456788888875 66677899999999 666555555556667 8998 888875554 4444566666 555 333
Q ss_pred EEeecCCc--ccccccceEEcCCCcEEEEeCCCCC----------CCccce-----------ecccccCCCceEEEEeCC
Q 017520 151 FLSYVNGS--KLRFANDVVEASDGSLYFTVSSSKY----------LPHEYC-----------LDILEGKPHGQLLKYDPS 207 (370)
Q Consensus 151 ~~~~~~g~--~~~~~~~l~~d~~G~l~v~d~~~~~----------~~~~~~-----------~~~~~~~~~g~l~~~d~~ 207 (370)
+....... ......-+....++.+.+-+..... .....+ ..+.....++.|..+|.+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~ 246 (368)
T 3mmy_A 167 LQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYIN 246 (368)
T ss_dssp EECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESS
T ss_pred EecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecC
Confidence 32110000 0011112233334444443321100 000000 002223345667777765
Q ss_pred CCe----EEEEecCCC------------CccceEEccCCCEEEEEeCCc-EEEEEeCCCCCCceeeeccCCCCCCCceeE
Q 017520 208 SNI----TTLVADGFY------------FANGVALSRDEDYVVVCESWK-CRKYWLKGERKGKLETFAENLPGAPDNINL 270 (370)
Q Consensus 208 t~~----~~~~~~~~~------------~p~gi~~~~dg~~l~v~~~~~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~ 270 (370)
... ...+..... ....++++++++.++.+...+ |..|++...+ ....+ ....+....+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~--~~~~~-~~~~~~v~~~~~ 323 (368)
T 3mmy_A 247 PPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDART--KLKTS-EQLDQPISACCF 323 (368)
T ss_dssp CSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTE--EEEEC-CCCSSCEEEEEE
T ss_pred CCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCc--EEEEe-cCCCCCceEEEE
Confidence 441 111111111 367899999999888887777 9999976431 11222 223334567889
Q ss_pred CCCCCEEEEEe
Q 017520 271 APDGTFWIAII 281 (370)
Q Consensus 271 d~~G~lwv~~~ 281 (370)
+++|.+.++..
T Consensus 324 s~~g~~l~~~s 334 (368)
T 3mmy_A 324 NHNGNIFAYAS 334 (368)
T ss_dssp CTTSSCEEEEE
T ss_pred CCCCCeEEEEe
Confidence 99997555543
No 264
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.92 E-value=0.0014 Score=59.88 Aligned_cols=131 Identities=18% Similarity=0.219 Sum_probs=82.3
Q ss_pred eEEEEeCCCCeEEEEe-------cCCCCccceEE--ccC-CC-EEEEEeCCc-EEEEEeCCCCCC-----ceeeeccCCC
Q 017520 200 QLLKYDPSSNITTLVA-------DGFYFANGVAL--SRD-ED-YVVVCESWK-CRKYWLKGERKG-----KLETFAENLP 262 (370)
Q Consensus 200 ~l~~~d~~t~~~~~~~-------~~~~~p~gi~~--~~d-g~-~l~v~~~~~-l~~~~~~~~~~~-----~~~~~~~~~~ 262 (370)
.++.+|++++.++.+. ..+..|.|+|+ +++ ++ ++|+++..+ +..|.+.....+ ..+.| .++
T Consensus 102 ~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f--~lg 179 (355)
T 3amr_A 102 EIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAF--KMN 179 (355)
T ss_dssp EEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEE--ECS
T ss_pred EEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEe--cCC
Confidence 4455688887776652 34578999999 764 43 577777777 777776422111 12223 355
Q ss_pred CCCCceeECC-CCCEEEEEecCchhHHHhhhcchhHHHHHHhCCccccccccCCCceEEEEECC--C----CcEEEEEeC
Q 017520 263 GAPDNINLAP-DGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAE--D----GTIIRNLVD 335 (370)
Q Consensus 263 g~p~~i~~d~-~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~--~----g~~~~~~~~ 335 (370)
+.|.++..|+ .|.||++.... .|.+|+. + ++++..+.
T Consensus 180 sq~EgcvvDd~~g~Lyv~eEd~-----------------------------------GIw~~da~p~~~~~~~~v~~~~- 223 (355)
T 3amr_A 180 SQTEGMAADDEYGRLYIAEEDE-----------------------------------AIWKFSAEPDGGSNGTVIDRAD- 223 (355)
T ss_dssp SCEEEEEEETTTTEEEEEETTT-----------------------------------EEEEEECSTTSCSCCEEEEEBS-
T ss_pred CCcceEEEcCCCCeEEEecccc-----------------------------------eEEEEeCCcCCCCCceEEEEec-
Confidence 6788999985 67899998654 3788873 3 33444432
Q ss_pred CCCCccccceeEEEE---C--CEEEEEeCCCCeEEEEeC
Q 017520 336 PTGQLMSFVTSGLQV---D--NHLYVISLTSNFIGKVQL 369 (370)
Q Consensus 336 ~~g~~~~~~t~~~~~---~--g~L~~gs~~~~~i~~~~~ 369 (370)
.+.+...+..+... + |+|++++...+.++++++
T Consensus 224 -~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr 261 (355)
T 3amr_A 224 -GRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDR 261 (355)
T ss_dssp -SSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEES
T ss_pred -CCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEEC
Confidence 23223234444332 2 579999988888888875
No 265
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=97.91 E-value=0.00015 Score=73.26 Aligned_cols=129 Identities=8% Similarity=-0.002 Sum_probs=83.5
Q ss_pred CcceEEcCCCcEEEEecCCeEEEEe--CCeEEEEEecCC----CceeceEEcCCCcE-EEEeC---------CCceEEEc
Q 017520 81 PEDASMDKNGVIYTATRDGWIKRLQ--DGTWVNWKFIDS----QTLVGLTSTKEGHL-IICDN---------ANGLHKVS 144 (370)
Q Consensus 81 P~~i~~d~~G~l~v~~~~g~I~~~~--~g~~~~~~~~~~----~p~~gl~~d~~G~L-~v~~~---------~~gi~~~~ 144 (370)
+.++.+.++|.++..+.+|.|+.++ +|+.+.+..... ... .+++++||+. ..+.. ...|+.++
T Consensus 18 ~~~~~~s~dg~~~~~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d 96 (719)
T 1z68_A 18 TFFPNWISGQEYLHQSADNNIVLYNIETGQSYTILSNRTMKSVNAS-NYGLSPDRQFVYLESDYSKLWRYSYTATYYIYD 96 (719)
T ss_dssp CCCCEESSSSEEEEECTTSCEEEEESSSCCEEEEECHHHHHTTTCS-EEEECTTSSEEEEEEEEEECSSSCEEEEEEEEE
T ss_pred CCccEECCCCeEEEEcCCCCEEEEEcCCCcEEEEEcccccccccee-eEEECCCCCeEEEEecCceeEEeecceEEEEEE
Confidence 4467888899777666788999999 666655543221 255 7899999984 33332 13466666
Q ss_pred -CCC-e---EEEEeecCCcccccccceEEcCCCc-EEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecCC
Q 017520 145 -EDG-V---ENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGF 218 (370)
Q Consensus 145 -~~g-~---~~~~~~~~g~~~~~~~~l~~d~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~ 218 (370)
.+| . ..+ . ..+..++++|||+ |.++. .+.|+.+|..+++...+....
T Consensus 97 ~~~g~~~~~~~l----~----~~~~~~~~SPDG~~la~~~-------------------~~~i~~~~~~~g~~~~l~~~~ 149 (719)
T 1z68_A 97 LSNGEFVRGNEL----P----RPIQYLCWSPVGSKLAYVY-------------------QNNIYLKQRPGDPPFQITFNG 149 (719)
T ss_dssp TTTTEECCSSCC----C----SSBCCEEECSSTTCEEEEE-------------------TTEEEEESSTTSCCEECCCCC
T ss_pred CCCCccccceec----C----cccccceECCCCCEEEEEE-------------------CCeEEEEeCCCCCcEEEecCC
Confidence 455 3 221 1 2466789999995 55542 257889988777665443211
Q ss_pred -------------------CCccceEEccCCCEEEEEe
Q 017520 219 -------------------YFANGVALSRDEDYVVVCE 237 (370)
Q Consensus 219 -------------------~~p~gi~~~~dg~~l~v~~ 237 (370)
....+++++|||+.|+++.
T Consensus 150 ~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~ 187 (719)
T 1z68_A 150 RENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAE 187 (719)
T ss_dssp BTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEE
T ss_pred CcCCeEcccccceeeeecccCcccEEECCCCCEEEEEE
Confidence 1124799999999887765
No 266
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=97.91 E-value=0.00027 Score=71.29 Aligned_cols=190 Identities=10% Similarity=0.028 Sum_probs=98.4
Q ss_pred CcceEEcCCCc-EEEEec---------CCeEEEEe--CCeE---EEEEecCCCceeceEEcCCCcEEEEeCCCceEEEc-
Q 017520 81 PEDASMDKNGV-IYTATR---------DGWIKRLQ--DGTW---VNWKFIDSQTLVGLTSTKEGHLIICDNANGLHKVS- 144 (370)
Q Consensus 81 P~~i~~d~~G~-l~v~~~---------~g~I~~~~--~g~~---~~~~~~~~~p~~gl~~d~~G~L~v~~~~~gi~~~~- 144 (370)
..++++.+||+ |.++.. ++.|+.++ +|+. ..+ ..... .++++|||+..+....+.|+.++
T Consensus 62 ~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l---~~~~~-~~~~SPDG~~la~~~~~~i~~~~~ 137 (719)
T 1z68_A 62 ASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL---PRPIQ-YLCWSPVGSKLAYVYQNNIYLKQR 137 (719)
T ss_dssp CSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC---CSSBC-CEEECSSTTCEEEEETTEEEEESS
T ss_pred eeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceec---Ccccc-cceECCCCCEEEEEECCeEEEEeC
Confidence 56789999997 444443 47899998 5554 322 23455 89999999744433355788888
Q ss_pred CCC-eEEEEee-cC-----Ccc--------cccccceEEcCCCc-EEEEeCCCCCCCcccee------------cc----
Q 017520 145 EDG-VENFLSY-VN-----GSK--------LRFANDVVEASDGS-LYFTVSSSKYLPHEYCL------------DI---- 192 (370)
Q Consensus 145 ~~g-~~~~~~~-~~-----g~~--------~~~~~~l~~d~~G~-l~v~d~~~~~~~~~~~~------------~~---- 192 (370)
.+| ...+... .. |.+ +.....++++|||+ |.++.... -....+.. .+
T Consensus 138 ~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~-~~~~~~~~~~~~~~~~~~~~~~~yp~ 216 (719)
T 1z68_A 138 PGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFND-TDIPVIAYSYYGDEQYPRTINIPYPK 216 (719)
T ss_dssp TTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEEC-TTSCEEEEEECCSSSSCEEEEEECCB
T ss_pred CCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECC-CCCceEEeeccCCCCCccceeecCCC
Confidence 555 4333211 00 000 11225789999996 44442110 00000000 00
Q ss_pred -cccCCCceEEEEeCCCCeEE---EEe------cCCCCccceEEccCCCEEEEE-eCCc----EEEEE----eCCCCCCc
Q 017520 193 -LEGKPHGQLLKYDPSSNITT---LVA------DGFYFANGVALSRDEDYVVVC-ESWK----CRKYW----LKGERKGK 253 (370)
Q Consensus 193 -~~~~~~g~l~~~d~~t~~~~---~~~------~~~~~p~gi~~~~dg~~l~v~-~~~~----l~~~~----~~~~~~~~ 253 (370)
-.......|+.+|.++++.. .+. ........++++||++.++.. +... |+.++ .++.+.
T Consensus 217 ~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~-- 294 (719)
T 1z68_A 217 AGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDC-- 294 (719)
T ss_dssp TTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEEC--
T ss_pred CCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCce--
Confidence 00012237888898876531 111 112234578999998744442 2222 88888 544321
Q ss_pred eeeec----cCCCCCCC-----ceeECCCCC-EEE
Q 017520 254 LETFA----ENLPGAPD-----NINLAPDGT-FWI 278 (370)
Q Consensus 254 ~~~~~----~~~~g~p~-----~i~~d~~G~-lwv 278 (370)
..+. ....+..+ .+++++||+ +++
T Consensus 295 -~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~ 328 (719)
T 1z68_A 295 -PKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYK 328 (719)
T ss_dssp -CGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEE
T ss_pred -EEEEecccccCCceEccccCCccEECCCCCeEEE
Confidence 1111 12222233 678899996 444
No 267
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=97.90 E-value=0.011 Score=52.72 Aligned_cols=181 Identities=11% Similarity=0.088 Sum_probs=105.9
Q ss_pred CCCcceEEcCCCc-EEEEecCCeEEEEe--CCeEEEE-EecCCCceeceEEcCCCcEEEE-eCCCceEEEcCCC-eEEEE
Q 017520 79 NHPEDASMDKNGV-IYTATRDGWIKRLQ--DGTWVNW-KFIDSQTLVGLTSTKEGHLIIC-DNANGLHKVSEDG-VENFL 152 (370)
Q Consensus 79 ~~P~~i~~d~~G~-l~v~~~~g~I~~~~--~g~~~~~-~~~~~~p~~gl~~d~~G~L~v~-~~~~gi~~~~~~g-~~~~~ 152 (370)
....++++.++|. |..+..+|.|..++ .+..... ........ ...+.+++..+++ ..++.+..++..+ .....
T Consensus 87 ~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~ 165 (340)
T 4aow_A 87 HFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVL-SVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTV 165 (340)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEE-EEEECTTSSCEEEEETTSCEEEECTTSCEEEEE
T ss_pred CCEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCCCcee-EEEEeecCccceeecCCCeEEEEEeCCCceEEE
Confidence 3467788998886 55666899998888 3333322 22333344 6677777765554 4334455555333 22211
Q ss_pred eecCCcccccccceEEcCCC--cEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecC-CCCccceEEccC
Q 017520 153 SYVNGSKLRFANDVVEASDG--SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG-FYFANGVALSRD 229 (370)
Q Consensus 153 ~~~~g~~~~~~~~l~~d~~G--~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~-~~~p~gi~~~~d 229 (370)
. ..+ ....+..+++.+++ .+.++.+ .++.|..+|..+++......+ ....+.++++++
T Consensus 166 ~-~~~-~~~~v~~~~~~~~~~~~~~~s~~-----------------~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~ 226 (340)
T 4aow_A 166 Q-DES-HSEWVSCVRFSPNSSNPIIVSCG-----------------WDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPD 226 (340)
T ss_dssp C-SSS-CSSCEEEEEECSCSSSCEEEEEE-----------------TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTT
T ss_pred E-ecc-ccCcccceEEccCCCCcEEEEEc-----------------CCCEEEEEECCCCceeeEecCCCCcEEEEEECCC
Confidence 1 111 11345567776654 4555532 346788899887766544433 234578999999
Q ss_pred CCEEEEEeCCc-EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCCEEEEEecC
Q 017520 230 EDYVVVCESWK-CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKL 283 (370)
Q Consensus 230 g~~l~v~~~~~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~ 283 (370)
++.++.+...+ |..||+...+ ....+. .......+++.+++.+..+...+
T Consensus 227 ~~~l~s~s~Dg~i~iwd~~~~~--~~~~~~--~~~~v~~~~~~~~~~~~~~~~d~ 277 (340)
T 4aow_A 227 GSLCASGGKDGQAMLWDLNEGK--HLYTLD--GGDIINALCFSPNRYWLCAATGP 277 (340)
T ss_dssp SSEEEEEETTCEEEEEETTTTE--EEEEEE--CSSCEEEEEECSSSSEEEEEETT
T ss_pred CCEEEEEeCCCeEEEEEeccCc--eeeeec--CCceEEeeecCCCCceeeccCCC
Confidence 99777777777 8888876431 122221 12234456778888777776554
No 268
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=97.88 E-value=0.0014 Score=61.88 Aligned_cols=181 Identities=9% Similarity=-0.058 Sum_probs=109.2
Q ss_pred CCCcceEEcCCCc--EEEEecCCeEEEEe--CC-e-------EEEEEecCCCceeceEEcC-CCcEEEEeCC-CceEEEc
Q 017520 79 NHPEDASMDKNGV--IYTATRDGWIKRLQ--DG-T-------WVNWKFIDSQTLVGLTSTK-EGHLIICDNA-NGLHKVS 144 (370)
Q Consensus 79 ~~P~~i~~d~~G~--l~v~~~~g~I~~~~--~g-~-------~~~~~~~~~~p~~gl~~d~-~G~L~v~~~~-~gi~~~~ 144 (370)
....++++++++. |.+++.+|.|..|+ .+ . ...+......+. ++++++ ++.++++... +.|..++
T Consensus 182 ~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~-~v~~~p~~~~~l~s~~~dg~i~i~d 260 (430)
T 2xyi_A 182 KEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVE-DVAWHLLHESLFGSVADDQKLMIWD 260 (430)
T ss_dssp SCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEE-EEEECSSCTTEEEEEETTSEEEEEE
T ss_pred CCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEe-eeEEeCCCCCEEEEEeCCCeEEEEE
Confidence 3567899988765 66677899999999 32 1 122333444567 899998 5567665444 4466666
Q ss_pred -CCC-----eEEEEeecCCcccccccceEEcCCCc-EEEEeCCCCCCCccceecccccCCCceEEEEeCCCC--eEEEEe
Q 017520 145 -EDG-----VENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSN--ITTLVA 215 (370)
Q Consensus 145 -~~g-----~~~~~~~~~g~~~~~~~~l~~d~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~--~~~~~~ 215 (370)
.++ ...+.. ....++.+++.++|. ++++.+ .++.|..||..+. .+..+.
T Consensus 261 ~~~~~~~~~~~~~~~-----~~~~v~~i~~~p~~~~~l~tg~-----------------~dg~v~vwd~~~~~~~~~~~~ 318 (430)
T 2xyi_A 261 TRNNNTSKPSHTVDA-----HTAEVNCLSFNPYSEFILATGS-----------------ADKTVALWDLRNLKLKLHSFE 318 (430)
T ss_dssp TTCSCSSSCSEEEEC-----CSSCEEEEEECSSCTTEEEEEE-----------------TTSEEEEEETTCTTSCSEEEE
T ss_pred CCCCCCCcceeEeec-----CCCCeEEEEeCCCCCCEEEEEe-----------------CCCeEEEEeCCCCCCCeEEee
Confidence 332 222211 113578899999885 666643 3578999997652 233333
Q ss_pred cCCCCccceEEccCCCEEEEEe-CCc-EEEEEeCCCCCC-----------ceeeeccCCCCCCCceeECCCCC-EEEEEe
Q 017520 216 DGFYFANGVALSRDEDYVVVCE-SWK-CRKYWLKGERKG-----------KLETFAENLPGAPDNINLAPDGT-FWIAII 281 (370)
Q Consensus 216 ~~~~~p~gi~~~~dg~~l~v~~-~~~-l~~~~~~~~~~~-----------~~~~~~~~~~g~p~~i~~d~~G~-lwv~~~ 281 (370)
........++++++++.++++. ..+ |..|++...... ............+..++++++|. +.++..
T Consensus 319 ~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s 398 (430)
T 2xyi_A 319 SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVS 398 (430)
T ss_dssp CCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEE
T ss_pred cCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEE
Confidence 3444567899999996555554 445 889988652110 11111112233467788899887 555544
Q ss_pred c
Q 017520 282 K 282 (370)
Q Consensus 282 ~ 282 (370)
.
T Consensus 399 ~ 399 (430)
T 2xyi_A 399 E 399 (430)
T ss_dssp T
T ss_pred C
Confidence 3
No 269
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.88 E-value=0.01 Score=58.56 Aligned_cols=45 Identities=16% Similarity=0.133 Sum_probs=31.7
Q ss_pred CCceEEEEEC-CCCcEEEEEeCCCCCccccceeEEEECCEEEEEeCCC
Q 017520 315 GGGAHLIHVA-EDGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTS 361 (370)
Q Consensus 315 ~~~g~v~~~~-~~g~~~~~~~~~~g~~~~~~t~~~~~~g~L~~gs~~~ 361 (370)
...+.+..+| .+|++++.+..+.+.....++. +.+|++|++...+
T Consensus 491 t~dg~l~A~D~~tG~~lW~~~l~~g~~~~P~~y--~~~G~qyv~~~~G 536 (599)
T 1w6s_A 491 TLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTY--THKGTQYVAIYYG 536 (599)
T ss_dssp CTTSEEEEEETTTCCEEEEEECSSCCCSCCEEE--EETTEEEEEEEEC
T ss_pred CCCCeEEEEECCCCCEEEEeeCCCCcEeccEEE--EeCCEEEEEEEcc
Confidence 3456789999 4699999998877654433322 4789999876544
No 270
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=97.85 E-value=0.0015 Score=62.43 Aligned_cols=134 Identities=13% Similarity=0.121 Sum_probs=77.4
Q ss_pred eEEEEEecCCCceeceEEcCCCc--EEEEeCCCceEEEcCCC-e--EEEEee---c-CC---cccccccceEEcCC----
Q 017520 108 TWVNWKFIDSQTLVGLTSTKEGH--LIICDNANGLHKVSEDG-V--ENFLSY---V-NG---SKLRFANDVVEASD---- 171 (370)
Q Consensus 108 ~~~~~~~~~~~p~~gl~~d~~G~--L~v~~~~~gi~~~~~~g-~--~~~~~~---~-~g---~~~~~~~~l~~d~~---- 171 (370)
+++.++.....|. +|++.+||. |||++..+.|+.++++| . +.+... . .+ .....+-+|+++|+
T Consensus 5 ~v~~va~gL~~P~-~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n 83 (463)
T 2wg3_C 5 CIQEVVSGLRQPV-GALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKN 83 (463)
T ss_dssp EEEEEEEEESSEE-EEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHH
T ss_pred EEEEeccCCCCce-EEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCC
Confidence 3566666678899 999999985 99998766688887554 2 122211 1 11 01235568999986
Q ss_pred CcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCC--------eEEEEec-----CCCCccceEEccCCCEEEEEeC
Q 017520 172 GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSN--------ITTLVAD-----GFYFANGVALSRDEDYVVVCES 238 (370)
Q Consensus 172 G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~--------~~~~~~~-----~~~~p~gi~~~~dg~~l~v~~~ 238 (370)
|.||++-+...-+... . ......+|.|+....+ ..+++.. ...+...|+|++||. ||++.-
T Consensus 84 ~~lYv~yt~~~~~~~~---~--~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~-LYv~~G 157 (463)
T 2wg3_C 84 GKLYVSYTTNQERWAI---G--PHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGF-LYIILG 157 (463)
T ss_dssp CEEEEEEEECCCSSCS---S--SSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSC-EEEEEC
T ss_pred CEEEEEEeCCCCCccc---C--CcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCc-EEEEeC
Confidence 8899985320000000 0 0000136666654311 1222221 223455699999997 898731
Q ss_pred ------------------Cc-EEEEEeCC
Q 017520 239 ------------------WK-CRKYWLKG 248 (370)
Q Consensus 239 ------------------~~-l~~~~~~~ 248 (370)
.+ |+|+++++
T Consensus 158 d~~~~~~~~~~~q~~~~~~GkIlRi~~dg 186 (463)
T 2wg3_C 158 DGMITLDDMEEMDGLSDFTGSVLRLDVDT 186 (463)
T ss_dssp CTTCCHHHHHHCTTCCSCTTEEEEEBCCC
T ss_pred CCCCCCCccccccCcCCCCeeEEEEECCC
Confidence 12 99999887
No 271
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.85 E-value=0.014 Score=54.86 Aligned_cols=138 Identities=14% Similarity=0.108 Sum_probs=72.5
Q ss_pred ceEEcCCCcEEEEecCCeEEEEe--CCeEE-EEEecCCCceeceEEcCCCcEEEEeCCCceEEEc-CCC--eEEEEeecC
Q 017520 83 DASMDKNGVIYTATRDGWIKRLQ--DGTWV-NWKFIDSQTLVGLTSTKEGHLIICDNANGLHKVS-EDG--VENFLSYVN 156 (370)
Q Consensus 83 ~i~~d~~G~l~v~~~~g~I~~~~--~g~~~-~~~~~~~~p~~gl~~d~~G~L~v~~~~~gi~~~~-~~g--~~~~~~~~~ 156 (370)
+++++ +..+++++.+|.|..++ +++.. .+........ ++.++ +..++.+..++.|..++ .++ ...+...
T Consensus 164 ~~~~~-~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~-~~~~~-~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~-- 238 (445)
T 2ovr_B 164 SSQMR-DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVR-CMHLH-EKRVVSGSRDATLRVWDIETGQCLHVLMGH-- 238 (445)
T ss_dssp EEEEE-TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEE-EEEEE-TTEEEEEETTSEEEEEESSSCCEEEEEECC--
T ss_pred EEEec-CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEE-EEEec-CCEEEEEeCCCEEEEEECCCCcEEEEEcCC--
Confidence 34444 33555666677777777 44432 2222233344 66664 23455555444455555 444 2222111
Q ss_pred CcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecCC-CCccceEEccCCCEEEE
Q 017520 157 GSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGF-YFANGVALSRDEDYVVV 235 (370)
Q Consensus 157 g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~-~~p~gi~~~~dg~~l~v 235 (370)
...+..+.+ +|+..++.+ .++.|..+|..+++........ .....+++ +++.++.
T Consensus 239 ---~~~v~~~~~--~~~~l~~~~-----------------~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~ 294 (445)
T 2ovr_B 239 ---VAAVRCVQY--DGRRVVSGA-----------------YDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVS 294 (445)
T ss_dssp ---SSCEEEEEE--CSSCEEEEE-----------------TTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEE
T ss_pred ---cccEEEEEE--CCCEEEEEc-----------------CCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEE
Confidence 123445555 444333322 3477888888766554333322 22334444 7887888
Q ss_pred EeCCc-EEEEEeCCC
Q 017520 236 CESWK-CRKYWLKGE 249 (370)
Q Consensus 236 ~~~~~-l~~~~~~~~ 249 (370)
+...+ |..||+...
T Consensus 295 ~~~d~~i~i~d~~~~ 309 (445)
T 2ovr_B 295 GSLDTSIRVWDVETG 309 (445)
T ss_dssp EETTSCEEEEETTTC
T ss_pred EeCCCeEEEEECCCC
Confidence 88777 999997653
No 272
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=97.82 E-value=0.0016 Score=67.70 Aligned_cols=176 Identities=13% Similarity=0.081 Sum_probs=106.9
Q ss_pred CCCcceEEcCCCcE-EEEecCCeEEEEe-C-CeEEEEEecCCCceeceEEcCCCc-EEEEeCCCceEEEc-CCC--eEEE
Q 017520 79 NHPEDASMDKNGVI-YTATRDGWIKRLQ-D-GTWVNWKFIDSQTLVGLTSTKEGH-LIICDNANGLHKVS-EDG--VENF 151 (370)
Q Consensus 79 ~~P~~i~~d~~G~l-~v~~~~g~I~~~~-~-g~~~~~~~~~~~p~~gl~~d~~G~-L~v~~~~~gi~~~~-~~g--~~~~ 151 (370)
....+++++++|.+ .+|+.+|.|..|+ . ++............ .++|.+ |. |..++.++.|..++ .++ +..+
T Consensus 18 ~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~-~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~ 95 (902)
T 2oaj_A 18 SKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIK-EMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTV 95 (902)
T ss_dssp SCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECSSCCCEE-EEEEET-TTEEEEEETTCEEEEEETTTCSEEEEE
T ss_pred CCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcCCCCCEE-EEEEcC-CCEEEEEECcCeEEEEECCCCcEEEEE
Confidence 45788999998864 4667899999999 3 33332222333456 899998 77 45455445566666 555 4333
Q ss_pred EeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEe------------cCCC
Q 017520 152 LSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA------------DGFY 219 (370)
Q Consensus 152 ~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~------------~~~~ 219 (370)
. .. ..+..++++++|+..++-. .++.|..||.++++...+. ....
T Consensus 96 ~--~~----~~V~~v~~sp~g~~l~sgs-----------------~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~ 152 (902)
T 2oaj_A 96 F--VP----GKITSIDTDASLDWMLIGL-----------------QNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLS 152 (902)
T ss_dssp E--CS----SCEEEEECCTTCSEEEEEE-----------------TTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCC
T ss_pred c--CC----CCEEEEEECCCCCEEEEEc-----------------CCCcEEEEECCCCccccceeccccccccccccCCC
Confidence 2 11 3578899999997555432 3578999998877653221 0112
Q ss_pred CccceEEccCC-CEEEEEeCCc-EEEEEeCCCCCCceeeeccC-----------------CCCCCCceeECCCCCEEEEE
Q 017520 220 FANGVALSRDE-DYVVVCESWK-CRKYWLKGERKGKLETFAEN-----------------LPGAPDNINLAPDGTFWIAI 280 (370)
Q Consensus 220 ~p~gi~~~~dg-~~l~v~~~~~-l~~~~~~~~~~~~~~~~~~~-----------------~~g~p~~i~~d~~G~lwv~~ 280 (370)
....++++|++ +.++++...+ | .||+...+. ...+... ..+....+++.++|++.++.
T Consensus 153 ~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasg 229 (902)
T 2oaj_A 153 PIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEI--KQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITI 229 (902)
T ss_dssp CCCEEEEETTEEEEEEEECSSCEE-EEETTTTEE--EEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEE
T ss_pred CeEEEEEccCCCCEEEEEeCCCcE-EEECCCCce--EEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEE
Confidence 45679999964 4556555555 7 888765321 1122111 01223457789999866665
Q ss_pred ec
Q 017520 281 IK 282 (370)
Q Consensus 281 ~~ 282 (370)
..
T Consensus 230 s~ 231 (902)
T 2oaj_A 230 HE 231 (902)
T ss_dssp ET
T ss_pred EC
Confidence 44
No 273
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=97.80 E-value=0.0012 Score=64.20 Aligned_cols=147 Identities=11% Similarity=0.021 Sum_probs=95.5
Q ss_pred CcceEEcCCCcEEEEecCCeEEEEe--CCe--EEEEEecCCCceece--EEcCCC-cEEEEeCCCc-eEEEc-CCC--eE
Q 017520 81 PEDASMDKNGVIYTATRDGWIKRLQ--DGT--WVNWKFIDSQTLVGL--TSTKEG-HLIICDNANG-LHKVS-EDG--VE 149 (370)
Q Consensus 81 P~~i~~d~~G~l~v~~~~g~I~~~~--~g~--~~~~~~~~~~p~~gl--~~d~~G-~L~v~~~~~g-i~~~~-~~g--~~ 149 (370)
..++++.+++.|.+|+.||.|..|+ ++. ...+........ ++ ++.++| .++++....+ +..++ +++ ..
T Consensus 269 v~sv~~s~~~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~-sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~ 347 (524)
T 2j04_B 269 ITTFDFLSPTTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYIL-SVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTK 347 (524)
T ss_dssp EEEEEESSSSEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEE-EEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHC
T ss_pred EEEEEecCCCeEEEEeCCCEEEEEECCCCCCceEEeecccccEE-EEEEEcCCCCCeEEEEeccCCeEEEEECCCCCccc
Confidence 4567777777888899999999999 343 223333444556 77 457777 7766554555 44455 455 33
Q ss_pred EEEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeE-EEEecCCCCccceEEcc
Q 017520 150 NFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNIT-TLVADGFYFANGVALSR 228 (370)
Q Consensus 150 ~~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~-~~~~~~~~~p~gi~~~~ 228 (370)
.+.....+ ..+..+++.|+|..+++.+ .++.|..+|..++.. ..+.......+.++++|
T Consensus 348 ~~~~~~~~---~~v~~v~fsp~~~~l~s~~-----------------~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp 407 (524)
T 2j04_B 348 TTVSRFRG---SNLVPVVYCPQIYSYIYSD-----------------GASSLRAVPSRAAFAVHPLVSRETTITAIGVSR 407 (524)
T ss_dssp EEEEECSC---CSCCCEEEETTTTEEEEEC-----------------SSSEEEEEETTCTTCCEEEEECSSCEEEEECCS
T ss_pred cccccccc---CcccceEeCCCcCeEEEeC-----------------CCCcEEEEECcccccceeeecCCCceEEEEeCC
Confidence 33222111 2367899999998877744 345788888876553 33334444568899999
Q ss_pred CCCEEEEEeCCc-EEEEEeCC
Q 017520 229 DEDYVVVCESWK-CRKYWLKG 248 (370)
Q Consensus 229 dg~~l~v~~~~~-l~~~~~~~ 248 (370)
+|+.+..+...+ |..|++..
T Consensus 408 ~g~~l~Sgs~Dgtv~lwd~~~ 428 (524)
T 2j04_B 408 LHPMVLAGSADGSLIITNAAR 428 (524)
T ss_dssp SCCBCEEEETTTEEECCBSCS
T ss_pred CCCeEEEEECCCEEEEEechH
Confidence 999777766666 77777644
No 274
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.75 E-value=0.028 Score=52.70 Aligned_cols=223 Identities=12% Similarity=0.048 Sum_probs=122.1
Q ss_pred cceEEcCCCcEEEEecCCeEEEEe--CCeE-EEEEecCCCceeceEEcCCCcEEEEeCCCceEEEc-CCC--eEEEEeec
Q 017520 82 EDASMDKNGVIYTATRDGWIKRLQ--DGTW-VNWKFIDSQTLVGLTSTKEGHLIICDNANGLHKVS-EDG--VENFLSYV 155 (370)
Q Consensus 82 ~~i~~d~~G~l~v~~~~g~I~~~~--~g~~-~~~~~~~~~p~~gl~~d~~G~L~v~~~~~gi~~~~-~~g--~~~~~~~~ 155 (370)
.++.++ +..+.+++.+|.|..++ +++. ..+........ ++.++ ...++++..++.|..++ .++ +..+.
T Consensus 203 ~~~~~~-~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~-~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~--- 276 (445)
T 2ovr_B 203 RCMHLH-EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVR-CVQYD-GRRVVSGAYDFMVKVWDPETETCLHTLQ--- 276 (445)
T ss_dssp EEEEEE-TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEE-EEEEC-SSCEEEEETTSCEEEEEGGGTEEEEEEC---
T ss_pred EEEEec-CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEE-EEEEC-CCEEEEEcCCCEEEEEECCCCcEeEEec---
Confidence 345554 34577788889999998 5543 33333344455 77773 23466666555576777 555 33331
Q ss_pred CCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecCCCCccceEEccCCCEEEE
Q 017520 156 NGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVV 235 (370)
Q Consensus 156 ~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~p~gi~~~~dg~~l~v 235 (370)
+. ...+..+.+ +|...++.+ .++.|..+|..+++......... ....+++.+++.++.
T Consensus 277 -~~-~~~v~~~~~--~~~~l~~~~-----------------~d~~i~i~d~~~~~~~~~~~~~~-~~v~~~~~~~~~l~~ 334 (445)
T 2ovr_B 277 -GH-TNRVYSLQF--DGIHVVSGS-----------------LDTSIRVWDVETGNCIHTLTGHQ-SLTSGMELKDNILVS 334 (445)
T ss_dssp -CC-SSCEEEEEE--CSSEEEEEE-----------------TTSCEEEEETTTCCEEEEECCCC-SCEEEEEEETTEEEE
T ss_pred -CC-CCceEEEEE--CCCEEEEEe-----------------CCCeEEEEECCCCCEEEEEcCCc-ccEEEEEEeCCEEEE
Confidence 11 124556666 565444432 34789999987776544333221 122344456777777
Q ss_pred EeCCc-EEEEEeCCCCCCceeeecc--CCCCCCCceeECCCCCEEEEEecCchhHHHhhhcchhHHHHHHhCCccccccc
Q 017520 236 CESWK-CRKYWLKGERKGKLETFAE--NLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFI 312 (370)
Q Consensus 236 ~~~~~-l~~~~~~~~~~~~~~~~~~--~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (370)
+...+ |..|++...+ ....+.. ...+....+.++ +++.++....
T Consensus 335 ~~~dg~i~vwd~~~~~--~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~d----------------------------- 381 (445)
T 2ovr_B 335 GNADSTVKIWDIKTGQ--CLQTLQGPNKHQSAVTCLQFN--KNFVITSSDD----------------------------- 381 (445)
T ss_dssp EETTSCEEEEETTTCC--EEEEECSTTSCSSCEEEEEEC--SSEEEEEETT-----------------------------
T ss_pred EeCCCeEEEEECCCCc--EEEEEccCCCCCCCEEEEEEC--CCEEEEEeCC-----------------------------
Confidence 77777 9999975432 1222221 011223335554 5554444332
Q ss_pred cCCCceEEEEEC-CCCcEEEEEeCC-CCCccccceeEEEECC-E-EEEEeCCCC---eEEEEeCC
Q 017520 313 TLGGGAHLIHVA-EDGTIIRNLVDP-TGQLMSFVTSGLQVDN-H-LYVISLTSN---FIGKVQLS 370 (370)
Q Consensus 313 ~~~~~g~v~~~~-~~g~~~~~~~~~-~g~~~~~~t~~~~~~g-~-L~~gs~~~~---~i~~~~~~ 370 (370)
+.|..+| .+|+.+..+... .+.....+..+....+ . |..|+.++. +|.+++++
T Consensus 382 -----g~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~ 441 (445)
T 2ovr_B 382 -----GTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFD 441 (445)
T ss_dssp -----SEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECC
T ss_pred -----CeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECC
Confidence 4577777 468888877432 2233345666666543 3 455666654 67777653
No 275
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=97.70 E-value=0.023 Score=50.39 Aligned_cols=113 Identities=9% Similarity=-0.067 Sum_probs=70.4
Q ss_pred CCceeceEEcCCCcEEEEeCCCc-eEEEc-CCC---eEEEEeecCCcccccccceEEcC--CCcEEEEeCCCCCCCccce
Q 017520 117 SQTLVGLTSTKEGHLIICDNANG-LHKVS-EDG---VENFLSYVNGSKLRFANDVVEAS--DGSLYFTVSSSKYLPHEYC 189 (370)
Q Consensus 117 ~~p~~gl~~d~~G~L~v~~~~~g-i~~~~-~~g---~~~~~~~~~g~~~~~~~~l~~d~--~G~l~v~d~~~~~~~~~~~ 189 (370)
+... +++++++|+++++....| |..++ .++ .+.. ....+. ...+..+++.+ +|++.++.+
T Consensus 12 ~~v~-~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~-~~~~~~-~~~v~~~~~~~~~d~~~l~s~~---------- 78 (351)
T 3f3f_A 12 DLVH-DVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELS-DSWRAH-DSSIVAIDWASPEYGRIIASAS---------- 78 (351)
T ss_dssp SCEE-EEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEE-EEEECC-SSCEEEEEECCGGGCSEEEEEE----------
T ss_pred ccee-EEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceec-ceeccC-CCcEEEEEEcCCCCCCEEEEEc----------
Confidence 4456 899999998655544444 55555 333 2222 211221 23577889988 577666643
Q ss_pred ecccccCCCceEEEEeCCCCe----------EEEEecCCCCccceEEccC--CCEEEEEeCCc-EEEEEeCCC
Q 017520 190 LDILEGKPHGQLLKYDPSSNI----------TTLVADGFYFANGVALSRD--EDYVVVCESWK-CRKYWLKGE 249 (370)
Q Consensus 190 ~~~~~~~~~g~l~~~d~~t~~----------~~~~~~~~~~p~gi~~~~d--g~~l~v~~~~~-l~~~~~~~~ 249 (370)
.++.|..||..+++ ...+.........++++++ ++.++.+...+ |..||+...
T Consensus 79 -------~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~ 144 (351)
T 3f3f_A 79 -------YDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEP 144 (351)
T ss_dssp -------TTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSST
T ss_pred -------CCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCCh
Confidence 34678888876542 2223233345678999999 88788877777 999998654
No 276
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.70 E-value=0.031 Score=54.98 Aligned_cols=42 Identities=12% Similarity=0.145 Sum_probs=29.8
Q ss_pred eEEEEECC-CCcEEEEEeCCCCCccccceeEEEECCEEEEEeCCC
Q 017520 318 AHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTS 361 (370)
Q Consensus 318 g~v~~~~~-~g~~~~~~~~~~g~~~~~~t~~~~~~g~L~~gs~~~ 361 (370)
+.+..+|. .|++++.+..+.+.....++ .+.+|++|++...+
T Consensus 507 g~l~A~D~~tG~~lW~~~~~~g~~a~P~~--y~~~G~qYv~~~~G 549 (582)
T 1flg_A 507 GYFKAFDAKSGKELWKFQTGSGIVSPPIT--WEQDGEQYLGVTVG 549 (582)
T ss_dssp SEEEEEETTTCCEEEEEECSSCCCSCCEE--EEETTEEEEEEEEC
T ss_pred CcEEEEECCCCCEEEEecCCCCcccCceE--EEECCEEEEEEEcc
Confidence 57899995 79999999987765333322 24789999985443
No 277
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=97.67 E-value=0.0068 Score=54.73 Aligned_cols=172 Identities=9% Similarity=0.046 Sum_probs=96.0
Q ss_pred CCcceEEcCCCc-EEEEe-cC--C--eEEEEe--CCeEEEEEecCCCceeceEEcCCCc-EEEEeCC-------------
Q 017520 80 HPEDASMDKNGV-IYTAT-RD--G--WIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGH-LIICDNA------------- 137 (370)
Q Consensus 80 ~P~~i~~d~~G~-l~v~~-~~--g--~I~~~~--~g~~~~~~~~~~~p~~gl~~d~~G~-L~v~~~~------------- 137 (370)
...++++.+||. |++.. .. + .|+.++ +|+...+..... .. ++++++||+ |+++...
T Consensus 60 ~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~-~~-~~~wspdg~~l~~~~~~~~~~~~~~~~~~~ 137 (347)
T 2gop_A 60 NATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN-IR-SLEWNEDSRKLLIVGFKRREDEDFIFEDDV 137 (347)
T ss_dssp SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE-EE-EEEECTTSSEEEEEEECCCC---------C
T ss_pred cCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC-cc-ceeECCCCCEEEEEEccCCCcCCcEEEccc
Confidence 455678889985 54444 22 3 488888 566555544434 66 899999996 5554321
Q ss_pred --------------CceEEEc-CCC-e-EEEEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCce
Q 017520 138 --------------NGLHKVS-EDG-V-ENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQ 200 (370)
Q Consensus 138 --------------~gi~~~~-~~g-~-~~~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~ 200 (370)
..|+.++ .+| . +.+.. + .+..+++++|| ++++.....-.. ...+...
T Consensus 138 ~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-----~--~~~~~~~spdg-~~~~~~~~~~~~--------~~~~~~~ 201 (347)
T 2gop_A 138 PAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-----P--RFSSGIWHRDK-IVVNVPHREIIP--------QYFKFWD 201 (347)
T ss_dssp CCC---------CEEEEEEEETTTTEEEEEEEE-----E--TTCEEEEETTE-EEEEEECCCSSC--------CSSCCEE
T ss_pred ceeecCcccccCccceEEEEECCCCeEEeeecC-----C--CcccccCCCCe-EEEEEecccccc--------ccccccc
Confidence 3477777 456 4 54432 1 45678899999 776642100000 0001357
Q ss_pred EEEEeCCCCeEEEEecCCCCccceEEccCCCEEEEEeC-C-------c-EEEEEeCCCCCCceeeeccCCCCCCCc-eeE
Q 017520 201 LLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCES-W-------K-CRKYWLKGERKGKLETFAENLPGAPDN-INL 270 (370)
Q Consensus 201 l~~~d~~t~~~~~~~~~~~~p~gi~~~~dg~~l~v~~~-~-------~-l~~~~~~~~~~~~~~~~~~~~~g~p~~-i~~ 270 (370)
|+.+| +++.+.+... ... ..+++||+.+++... . . |+.++ .+ +...+.........+ +..
T Consensus 202 l~~~d--~~~~~~l~~~-~~~--~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d-~~----~~~~l~~~~~~~~~~~~~~ 271 (347)
T 2gop_A 202 IYIWE--DGKEEKMFEK-VSF--YAVDSDGERILLYGKPEKKYMSEHNKLYIYD-GK----EVMGILDEVDRGVGQAKIK 271 (347)
T ss_dssp EEEEE--TTEEEEEEEE-ESE--EEEEECSSCEEEEECCSSSCCCSSCEEEEEC-SS----CEEESSTTCCSEEEEEEEE
T ss_pred EEEeC--CCceEEeccC-cce--eeECCCCCEEEEEEccccCCccccceEEEEC-CC----ceEeccccCCcccCCccEE
Confidence 99999 5666655543 211 233899987766542 1 2 77777 32 233332222222333 667
Q ss_pred CCCCCEEEEEe
Q 017520 271 APDGTFWIAII 281 (370)
Q Consensus 271 d~~G~lwv~~~ 281 (370)
+ +| +++...
T Consensus 272 s-dg-~~~~~~ 280 (347)
T 2gop_A 272 D-GK-VYFTLF 280 (347)
T ss_dssp T-TE-EEEEEE
T ss_pred c-Cc-EEEEEe
Confidence 7 77 665543
No 278
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.66 E-value=0.013 Score=58.94 Aligned_cols=42 Identities=24% Similarity=0.313 Sum_probs=30.3
Q ss_pred ceEEEEECC-CCcEEEEEeCCCCCccccceeEEEECCEEEEEeCC
Q 017520 317 GAHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLT 360 (370)
Q Consensus 317 ~g~v~~~~~-~g~~~~~~~~~~g~~~~~~t~~~~~~g~L~~gs~~ 360 (370)
.+.+..+|. .|++++.+..+.+.....++. +.+|+.|++...
T Consensus 495 dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty--~~~G~qyv~~~~ 537 (689)
T 1yiq_A 495 DGRVIAYAADTGEKLWEQPAASGVMAAPVTY--SVDGEQYVTFMA 537 (689)
T ss_dssp TSEEEEEETTTCCEEEEEECSSCCCSCCEEE--EETTEEEEEEEE
T ss_pred CCcEEEEECCCCccceeeeCCCCcccCceEE--EECCEEEEEEEe
Confidence 357899994 699999998877653333322 578999988553
No 279
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.66 E-value=0.031 Score=55.13 Aligned_cols=64 Identities=17% Similarity=0.121 Sum_probs=41.1
Q ss_pred ceEEc-CCCc----EEEEecCCeEEEEe--CCeEEEEEecCC-----CceeceEEcCCCcEEEEeC------CCceEEEc
Q 017520 83 DASMD-KNGV----IYTATRDGWIKRLQ--DGTWVNWKFIDS-----QTLVGLTSTKEGHLIICDN------ANGLHKVS 144 (370)
Q Consensus 83 ~i~~d-~~G~----l~v~~~~g~I~~~~--~g~~~~~~~~~~-----~p~~gl~~d~~G~L~v~~~------~~gi~~~~ 144 (370)
++++. .+|. ||+++.++.|+.+| +|+...-..... .......+. +|.+|++.. .+.|+.+|
T Consensus 110 g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~-~g~V~vg~~g~e~g~~g~v~A~D 188 (599)
T 1w6s_A 110 GLAYWPGDGKTPALILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVV-KDKVIIGSSGAELGVRGYLTAYD 188 (599)
T ss_dssp CCEEECCCSSSCCEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-TTEEEECCBCGGGTCCCEEEEEE
T ss_pred ceEEEecCCcceeEEEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEE-CCEEEEEecccccCCCCeEEEEE
Confidence 35663 2566 99999999999999 787654332221 111022332 678998763 35689999
Q ss_pred -CCC
Q 017520 145 -EDG 147 (370)
Q Consensus 145 -~~g 147 (370)
++|
T Consensus 189 ~~TG 192 (599)
T 1w6s_A 189 VKTG 192 (599)
T ss_dssp TTTC
T ss_pred CCCC
Confidence 778
No 280
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=97.65 E-value=0.0036 Score=65.13 Aligned_cols=149 Identities=7% Similarity=-0.025 Sum_probs=95.0
Q ss_pred CcceEEcCCCc-EEEEecCCeEEEEe--CCeEEEEEecCCCceeceEEcCCCcE-EEEeCCCceEEEc-CCC-eEEEEe-
Q 017520 81 PEDASMDKNGV-IYTATRDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGHL-IICDNANGLHKVS-EDG-VENFLS- 153 (370)
Q Consensus 81 P~~i~~d~~G~-l~v~~~~g~I~~~~--~g~~~~~~~~~~~p~~gl~~d~~G~L-~v~~~~~gi~~~~-~~g-~~~~~~- 153 (370)
-.++++.+ |. |..++.++.|..|+ +++........+... .++++++|+. +++...+.|..++ +++ ...+..
T Consensus 61 V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~~~~~V~-~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~ 138 (902)
T 2oaj_A 61 IKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTVFVPGKIT-SIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLD 138 (902)
T ss_dssp EEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEEEECSSCEE-EEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEEC
T ss_pred EEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEEEcCCCCEE-EEEECCCCCEEEEEcCCCcEEEEECCCCccccceec
Confidence 46788888 66 77777999999999 555332223345567 8999999974 5555545566666 555 322211
Q ss_pred ------ecCCcccccccceEEcCCC-cEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecCC--------
Q 017520 154 ------YVNGSKLRFANDVVEASDG-SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGF-------- 218 (370)
Q Consensus 154 ------~~~g~~~~~~~~l~~d~~G-~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~-------- 218 (370)
.........+..++++|++ .+.++.. .++.+ .||..+++........
T Consensus 139 ~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~-----------------~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~ 200 (902)
T 2oaj_A 139 NLQKSSFFPAARLSPIVSIQWNPRDIGTVLISY-----------------EYVTL-TYSLVENEIKQSFIYELPPFAPGG 200 (902)
T ss_dssp CHHHHHTCSSSCCCCCCEEEEETTEEEEEEEEC-----------------SSCEE-EEETTTTEEEEEECCCBCTTCCCS
T ss_pred cccccccccccCCCCeEEEEEccCCCCEEEEEe-----------------CCCcE-EEECCCCceEEEEecccCCcCCCc
Confidence 0001112467889999964 4444322 34678 9998877654333221
Q ss_pred -----------CCccceEEccCCCEEEEEeCCc-EEEEEeCCC
Q 017520 219 -----------YFANGVALSRDEDYVVVCESWK-CRKYWLKGE 249 (370)
Q Consensus 219 -----------~~p~gi~~~~dg~~l~v~~~~~-l~~~~~~~~ 249 (370)
...+.+++++||+.+..+...+ |..||+...
T Consensus 201 ~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g 243 (902)
T 2oaj_A 201 DFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSG 243 (902)
T ss_dssp TTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTC
T ss_pred ccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCC
Confidence 2357899999999777777777 888987543
No 281
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=97.62 E-value=0.0081 Score=58.52 Aligned_cols=146 Identities=10% Similarity=0.061 Sum_probs=91.5
Q ss_pred CCcceEEcCCCc-EEEEecCCeEEEEe-CCeEEEEEecCC-----CceeceEEcCCCc-EEEEeCCCceEEEc-CCC-e-
Q 017520 80 HPEDASMDKNGV-IYTATRDGWIKRLQ-DGTWVNWKFIDS-----QTLVGLTSTKEGH-LIICDNANGLHKVS-EDG-V- 148 (370)
Q Consensus 80 ~P~~i~~d~~G~-l~v~~~~g~I~~~~-~g~~~~~~~~~~-----~p~~gl~~d~~G~-L~v~~~~~gi~~~~-~~g-~- 148 (370)
...++++.++|. |-+++.+|.|..|+ ++-+..+. ... ... +++++|||+ |+++..++.|..++ .++ .
T Consensus 87 ~V~~vawSPdG~~LAs~s~dg~V~iwd~~~~l~~l~-~~~~~~~~sv~-svafSPDG~~LAsgs~DGtVkIWd~~~~~l~ 164 (588)
T 2j04_A 87 YPRVCKPSPIDDWMAVLSNNGNVSVFKDNKMLTNLD-SKGNLSSRTYH-CFEWNPIESSIVVGNEDGELQFFSIRKNSEN 164 (588)
T ss_dssp CEEEEEECSSSSCEEEEETTSCEEEEETTEEEEECC-CSSCSTTTCEE-EEEECSSSSCEEEEETTSEEEEEECCCCTTT
T ss_pred cEEEEEECCCCCEEEEEeCCCcEEEEeCCceeeecc-CCCccccccEE-EEEEcCCCCEEEEEcCCCEEEEEECCCCccc
Confidence 467788899986 55677999999999 55444433 221 356 899999997 55555444455555 444 3
Q ss_pred -------EEEEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeE----EEEec-
Q 017520 149 -------ENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNIT----TLVAD- 216 (370)
Q Consensus 149 -------~~~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~----~~~~~- 216 (370)
..+.....| ....+..+++.||| + ++.+ .++.+..+|.+++.. +.+..
T Consensus 165 ~~~~i~l~ti~~~~~g-h~~~V~sVawSPdg-L-aass-----------------~D~tVrlWd~~~~~~~~~~~tL~~~ 224 (588)
T 2j04_A 165 TPEFYFESSIRLSDAG-SKDWVTHIVWYEDV-L-VAAL-----------------SNNSVFSMTVSASSHQPVSRMIQNA 224 (588)
T ss_dssp CCCCEEEEEEECSCTT-CCCCEEEEEEETTE-E-EEEE-----------------TTCCEEEECCCSSSSCCCEEEEECC
T ss_pred cccceeeeeeeccccc-ccccEEEEEEcCCc-E-EEEe-----------------CCCeEEEEECCCCccccceeeeccc
Confidence 112111233 23578899999999 4 4432 346788888876653 22322
Q ss_pred CCCCccceEEccCCCEEEEEeCCcEEEEEeCCC
Q 017520 217 GFYFANGVALSRDEDYVVVCESWKCRKYWLKGE 249 (370)
Q Consensus 217 ~~~~p~gi~~~~dg~~l~v~~~~~l~~~~~~~~ 249 (370)
.-.....++++ |+.+..+..+.|..|++.+.
T Consensus 225 h~~~V~svaFs--g~~LASa~~~tIkLWd~~~~ 255 (588)
T 2j04_A 225 SRRKITDLKIV--DYKVVLTCPGYVHKIDLKNY 255 (588)
T ss_dssp CSSCCCCEEEE--TTEEEEECSSEEEEEETTTT
T ss_pred ccCcEEEEEEE--CCEEEEEeCCeEEEEECCCC
Confidence 22457789998 46566665433999998764
No 282
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=97.61 E-value=0.022 Score=50.94 Aligned_cols=149 Identities=15% Similarity=0.095 Sum_probs=84.9
Q ss_pred CCcceEEcCCCcE-EEEecCCeEEEEe--CCeE---EEEEecCCCceeceEEcC--CCcEEE-EeCCCceEEEc-CCC-e
Q 017520 80 HPEDASMDKNGVI-YTATRDGWIKRLQ--DGTW---VNWKFIDSQTLVGLTSTK--EGHLII-CDNANGLHKVS-EDG-V 148 (370)
Q Consensus 80 ~P~~i~~d~~G~l-~v~~~~g~I~~~~--~g~~---~~~~~~~~~p~~gl~~d~--~G~L~v-~~~~~gi~~~~-~~g-~ 148 (370)
.-.+++++++|+. ..++.++.|..|+ +++. ..+....+... ++++.+ +|++++ +..++.|..++ +++ .
T Consensus 15 ~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~-~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~ 93 (316)
T 3bg1_A 15 MIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVW-QVAWAHPMYGNILASCSYDRKVIIWREENGTW 93 (316)
T ss_dssp CEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEE-EEEECCGGGSSCEEEEETTSCEEEECCSSSCC
T ss_pred eEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEE-EEEeCCCCCCCEEEEEECCCEEEEEECCCCcc
Confidence 3467889888864 4566899999998 5542 23334455567 899864 366544 44444566666 555 3
Q ss_pred EEEEeecCCcccccccceEEcCC--CcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCe-EEEEe--c-CCCCcc
Q 017520 149 ENFLSYVNGSKLRFANDVVEASD--GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNI-TTLVA--D-GFYFAN 222 (370)
Q Consensus 149 ~~~~~~~~g~~~~~~~~l~~d~~--G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~-~~~~~--~-~~~~p~ 222 (370)
..... ..+. ...++.+++.|+ |.+.++.+ .++.|..+|..++. ..... . .....+
T Consensus 94 ~~~~~-~~~h-~~~V~~v~~~p~~~g~~lasgs-----------------~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~ 154 (316)
T 3bg1_A 94 EKSHE-HAGH-DSSVNSVCWAPHDYGLILACGS-----------------SDGAISLLTYTGEGQWEVKKINNAHTIGCN 154 (316)
T ss_dssp CEEEE-ECCC-SSCCCEEEECCTTTCSCEEEEC-----------------SSSCEEEEEECSSSCEEECCBTTSSSSCBC
T ss_pred eEEEE-ccCC-CCceEEEEECCCCCCcEEEEEc-----------------CCCCEEEEecCCCCCcceeeeeccccCCcc
Confidence 22211 1221 136788999887 66655543 34667777765442 22111 1 112335
Q ss_pred ceEEccC-----------------CCEEEEEeCCc-EEEEEeCC
Q 017520 223 GVALSRD-----------------EDYVVVCESWK-CRKYWLKG 248 (370)
Q Consensus 223 gi~~~~d-----------------g~~l~v~~~~~-l~~~~~~~ 248 (370)
.++++++ ++.+..+...+ |..|++..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~ 198 (316)
T 3bg1_A 155 AVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEE 198 (316)
T ss_dssp CCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECT
T ss_pred eEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCC
Confidence 6777776 34444444455 77777753
No 283
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=97.60 E-value=0.0055 Score=62.32 Aligned_cols=188 Identities=12% Similarity=0.120 Sum_probs=106.4
Q ss_pred CCcceEEcCC--Cc-EEEEecCCeEEEEe--CCeE---EEEEecCCCceeceEEcCC--CcEEEEeCC-CceEEEc-CCC
Q 017520 80 HPEDASMDKN--GV-IYTATRDGWIKRLQ--DGTW---VNWKFIDSQTLVGLTSTKE--GHLIICDNA-NGLHKVS-EDG 147 (370)
Q Consensus 80 ~P~~i~~d~~--G~-l~v~~~~g~I~~~~--~g~~---~~~~~~~~~p~~gl~~d~~--G~L~v~~~~-~gi~~~~-~~g 147 (370)
...++++.++ |+ +.+++.+|.|..|+ +++. ..+........ ++++.++ |+++++... +.|..++ .++
T Consensus 55 ~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~-~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~ 133 (753)
T 3jro_A 55 PVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVN-SVQWAPHEYGPLLLVASSDGKVSVVEFKEN 133 (753)
T ss_dssp CEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEE-EEEECCGGGCSEEEEEETTSEEEEEECCSS
T ss_pred ceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeE-EEEECCCCCCCEEEEEeCCCcEEEEEeecC
Confidence 3467788755 64 56677899999999 6643 22223344566 8999988 775554444 4455566 333
Q ss_pred --eEEEEeecCCcccccccceEEcC-------------CCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCe--
Q 017520 148 --VENFLSYVNGSKLRFANDVVEAS-------------DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNI-- 210 (370)
Q Consensus 148 --~~~~~~~~~g~~~~~~~~l~~d~-------------~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~-- 210 (370)
...... .+. ...+..+++++ +|.+.++.+ .++.|..||..++.
T Consensus 134 ~~~~~~~~--~~~-~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs-----------------~dg~I~iwd~~~~~~~ 193 (753)
T 3jro_A 134 GTTSPIII--DAH-AIGVNSASWAPATIEEDGEHNGTKESRKFVTGG-----------------ADNLVKIWKYNSDAQT 193 (753)
T ss_dssp SCCCCEEE--ECC-SSCEEEEEECCCC---------CGGGCCEEEEE-----------------TTSCEEEEEEETTTTE
T ss_pred CCcceeEe--ecC-CCceEEEEecCcccccccccccCCCCCEEEEEE-----------------CCCeEEEEeccCCccc
Confidence 111111 111 13567788887 465444432 34677777765442
Q ss_pred --EEE-EecCCCCccceEEccC---CCEEEEEeCCc-EEEEEeCCCCCCceeeec--cCCCCCCCceeECCCCCEEEE-E
Q 017520 211 --TTL-VADGFYFANGVALSRD---EDYVVVCESWK-CRKYWLKGERKGKLETFA--ENLPGAPDNINLAPDGTFWIA-I 280 (370)
Q Consensus 211 --~~~-~~~~~~~p~gi~~~~d---g~~l~v~~~~~-l~~~~~~~~~~~~~~~~~--~~~~g~p~~i~~d~~G~lwv~-~ 280 (370)
... +.........++++++ ++.++.+...+ |..|++............ ....+....++++++|++.++ .
T Consensus 194 ~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s 273 (753)
T 3jro_A 194 YVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSG 273 (753)
T ss_dssp EEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEEC
T ss_pred ceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEc
Confidence 111 1222334578999999 78777777777 999998764211111111 112334566788888864444 4
Q ss_pred ecCchhHH
Q 017520 281 IKLDARRM 288 (370)
Q Consensus 281 ~~~~~~~~ 288 (370)
..+...++
T Consensus 274 ~Dg~I~vw 281 (753)
T 3jro_A 274 GDNKVTLW 281 (753)
T ss_dssp SSSCEECC
T ss_pred CCCEEEEE
Confidence 44433333
No 284
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=97.59 E-value=0.013 Score=54.69 Aligned_cols=149 Identities=11% Similarity=0.052 Sum_probs=87.0
Q ss_pred CCcceEEcCCCc-EEEEecCCeEEEEe-----CCeEEEEEe-------------cCCCceeceE--EcCCCcEEEE-eCC
Q 017520 80 HPEDASMDKNGV-IYTATRDGWIKRLQ-----DGTWVNWKF-------------IDSQTLVGLT--STKEGHLIIC-DNA 137 (370)
Q Consensus 80 ~P~~i~~d~~G~-l~v~~~~g~I~~~~-----~g~~~~~~~-------------~~~~p~~gl~--~d~~G~L~v~-~~~ 137 (370)
...++++.+++. |.+++.+|.|..|+ .++...... ...... .+. +.+++.++++ ...
T Consensus 113 ~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~d 191 (437)
T 3gre_A 113 TVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAV-RMRAFVNEEKSLLVALTNL 191 (437)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEE-EEEEEECSSCEEEEEEETT
T ss_pred CEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCce-EEEEEEcCCCCEEEEEeCC
Confidence 466788888775 55677889888886 232221110 112223 344 4467765554 444
Q ss_pred CceEEEc-CCC--eEEEEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEE
Q 017520 138 NGLHKVS-EDG--VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLV 214 (370)
Q Consensus 138 ~gi~~~~-~~g--~~~~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~ 214 (370)
+.|..++ .++ ...+... .....+..++++++|+..++.+ .++.|..||..+++....
T Consensus 192 ~~i~iwd~~~~~~~~~~~~~---~h~~~v~~~~~s~~~~~l~s~~-----------------~dg~i~iwd~~~~~~~~~ 251 (437)
T 3gre_A 192 SRVIIFDIRTLERLQIIENS---PRHGAVSSICIDEECCVLILGT-----------------TRGIIDIWDIRFNVLIRS 251 (437)
T ss_dssp SEEEEEETTTCCEEEEEECC---GGGCCEEEEEECTTSCEEEEEE-----------------TTSCEEEEETTTTEEEEE
T ss_pred CeEEEEeCCCCeeeEEEccC---CCCCceEEEEECCCCCEEEEEc-----------------CCCeEEEEEcCCccEEEE
Confidence 4566666 555 3333221 0124678899999998766643 347799999887665433
Q ss_pred e--cCCCCccceEEc----cCCCEEEEEeCCc-EEEEEeCCC
Q 017520 215 A--DGFYFANGVALS----RDEDYVVVCESWK-CRKYWLKGE 249 (370)
Q Consensus 215 ~--~~~~~p~gi~~~----~dg~~l~v~~~~~-l~~~~~~~~ 249 (370)
. ........++++ ++++.++.+...+ |..||+...
T Consensus 252 ~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~ 293 (437)
T 3gre_A 252 WSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKG 293 (437)
T ss_dssp EBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTT
T ss_pred EecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCC
Confidence 2 222234566444 5676566666666 888887643
No 285
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.59 E-value=0.02 Score=53.76 Aligned_cols=143 Identities=15% Similarity=0.084 Sum_probs=79.6
Q ss_pred CcceEEcCCCcEEEEecCCeEEEEe--CCeE-EEEEecCCCceeceEEcCCCcEEEEeCCCceEEEc-CCC--eEEEEee
Q 017520 81 PEDASMDKNGVIYTATRDGWIKRLQ--DGTW-VNWKFIDSQTLVGLTSTKEGHLIICDNANGLHKVS-EDG--VENFLSY 154 (370)
Q Consensus 81 P~~i~~d~~G~l~v~~~~g~I~~~~--~g~~-~~~~~~~~~p~~gl~~d~~G~L~v~~~~~gi~~~~-~~g--~~~~~~~ 154 (370)
..++++| +..+.+|+.+|.|..++ +++. ..+........ +++++ ++.++.+..++.|..++ .++ .... ..
T Consensus 176 v~~l~~~-~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~-~l~~~-~~~l~s~s~dg~i~vwd~~~~~~~~~~-~~ 251 (435)
T 1p22_A 176 VLCLQYD-ERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVL-HLRFN-NGMMVTCSKDRSIAVWDMASPTDITLR-RV 251 (435)
T ss_dssp EEEEECC-SSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEE-EEECC-TTEEEEEETTSCEEEEECSSSSCCEEE-EE
T ss_pred EEEEEEC-CCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEE-EEEEc-CCEEEEeeCCCcEEEEeCCCCCCceee-eE
Confidence 3445553 33566777888888888 5553 33333334455 77775 34566666555566666 444 2211 11
Q ss_pred cCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecC-CCCccceEEccCCCEE
Q 017520 155 VNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG-FYFANGVALSRDEDYV 233 (370)
Q Consensus 155 ~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~-~~~p~gi~~~~dg~~l 233 (370)
..+. ...+..+.+ +|+..++.+ .++.|..+|..+++....... ......+++ +++.+
T Consensus 252 ~~~~-~~~v~~~~~--~~~~l~s~~-----------------~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l 309 (435)
T 1p22_A 252 LVGH-RAAVNVVDF--DDKYIVSAS-----------------GDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLV 309 (435)
T ss_dssp ECCC-SSCEEEEEE--ETTEEEEEE-----------------TTSEEEEEETTTCCEEEEEECCSSCEEEEEE--ETTEE
T ss_pred ecCC-CCcEEEEEe--CCCEEEEEe-----------------CCCeEEEEECCcCcEEEEEcCCCCcEEEEEe--CCCEE
Confidence 1111 124556666 455444432 357899999887765433332 222334444 56777
Q ss_pred EEEeCCc-EEEEEeCCC
Q 017520 234 VVCESWK-CRKYWLKGE 249 (370)
Q Consensus 234 ~v~~~~~-l~~~~~~~~ 249 (370)
+.+...+ |..||+...
T Consensus 310 ~~g~~dg~i~iwd~~~~ 326 (435)
T 1p22_A 310 VSGSSDNTIRLWDIECG 326 (435)
T ss_dssp EEEETTSCEEEEETTTC
T ss_pred EEEeCCCeEEEEECCCC
Confidence 7777777 999997643
No 286
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=97.56 E-value=0.012 Score=52.66 Aligned_cols=181 Identities=9% Similarity=0.068 Sum_probs=95.7
Q ss_pred CCcceEEcC--CC-cEEEEecCCeEEEEe--CCeE---EEEEecCCCceeceEEcCC--CcEEEEeCCCc-eEEEc-CCC
Q 017520 80 HPEDASMDK--NG-VIYTATRDGWIKRLQ--DGTW---VNWKFIDSQTLVGLTSTKE--GHLIICDNANG-LHKVS-EDG 147 (370)
Q Consensus 80 ~P~~i~~d~--~G-~l~v~~~~g~I~~~~--~g~~---~~~~~~~~~p~~gl~~d~~--G~L~v~~~~~g-i~~~~-~~g 147 (370)
...++++.+ +| .|..++.++.|..|+ +++. ..+........ ++++.++ |.++++....+ |..++ .++
T Consensus 59 ~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~-~v~~~p~~~g~~lasgs~D~~i~lwd~~~~ 137 (316)
T 3bg1_A 59 PVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVN-SVCWAPHDYGLILACGSSDGAISLLTYTGE 137 (316)
T ss_dssp CEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCC-EEEECCTTTCSCEEEECSSSCEEEEEECSS
T ss_pred cEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceE-EEEECCCCCCcEEEEEcCCCCEEEEecCCC
Confidence 345677753 34 566777899999999 4532 22323344566 8999887 66555443434 54455 333
Q ss_pred -eEEEEeecCCcccccccceEEcCCC-----------------cEEEEeCCCCCCCccceecccccCCCceEEEEeCCCC
Q 017520 148 -VENFLSYVNGSKLRFANDVVEASDG-----------------SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSN 209 (370)
Q Consensus 148 -~~~~~~~~~g~~~~~~~~l~~d~~G-----------------~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~ 209 (370)
.........+. ...++.+++++++ +.+++. ..++.|..+|..++
T Consensus 138 ~~~~~~~~~~~h-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg-----------------s~D~~v~lWd~~~~ 199 (316)
T 3bg1_A 138 GQWEVKKINNAH-TIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASG-----------------GCDNLIKLWKEEED 199 (316)
T ss_dssp SCEEECCBTTSS-SSCBCCCEECCCCCC------CCSCCCCCCCBEECC-----------------BTTSBCCEEEECTT
T ss_pred CCcceeeeeccc-cCCcceEEEccccCCccccccccccCccccceEEEe-----------------cCCCeEEEEEeCCC
Confidence 11111111221 1345667777763 222221 23456666665433
Q ss_pred -eEEE---EecCCCCccceEEccCC----CEEEEEeCCc-EEEEEeCCCCCCc--eeeeccCCCCCCCceeECCCCCEEE
Q 017520 210 -ITTL---VADGFYFANGVALSRDE----DYVVVCESWK-CRKYWLKGERKGK--LETFAENLPGAPDNINLAPDGTFWI 278 (370)
Q Consensus 210 -~~~~---~~~~~~~p~gi~~~~dg----~~l~v~~~~~-l~~~~~~~~~~~~--~~~~~~~~~g~p~~i~~d~~G~lwv 278 (370)
.... +.........++++|++ +.+..+...+ |..|+++....+. ...+ ....+....++++++|++.+
T Consensus 200 ~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~-~~~~~~v~~v~~sp~g~~la 278 (316)
T 3bg1_A 200 GQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLL-HKFNDVVWHVSWSITANILA 278 (316)
T ss_dssp SCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEE-EECSSCEEEEEECTTTCCEE
T ss_pred CccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhh-hcCCCcEEEEEEcCCCCEEE
Confidence 1111 11222345788999986 6566666666 8888876521111 1111 12223345677888887555
Q ss_pred EE
Q 017520 279 AI 280 (370)
Q Consensus 279 ~~ 280 (370)
+.
T Consensus 279 s~ 280 (316)
T 3bg1_A 279 VS 280 (316)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 287
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=97.56 E-value=0.038 Score=48.86 Aligned_cols=174 Identities=15% Similarity=0.108 Sum_probs=98.4
Q ss_pred CCcceEEcCCCcE-EEEecCCeEEEEe-CC---e-EEEEEecCCCceeceEEcC--CCcEEEEeCCCc-eEEEc-CCC-e
Q 017520 80 HPEDASMDKNGVI-YTATRDGWIKRLQ-DG---T-WVNWKFIDSQTLVGLTSTK--EGHLIICDNANG-LHKVS-EDG-V 148 (370)
Q Consensus 80 ~P~~i~~d~~G~l-~v~~~~g~I~~~~-~g---~-~~~~~~~~~~p~~gl~~d~--~G~L~v~~~~~g-i~~~~-~~g-~ 148 (370)
.-.+++++++|.. ..++.+|.|..|+ ++ + ...+....+... ++++.+ +|+++++....+ |..++ .++ .
T Consensus 11 ~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~-~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~ 89 (297)
T 2pm7_B 11 MIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVW-RVDWAHPKFGTILASCSYDGKVMIWKEENGRW 89 (297)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEE-EEEECCGGGCSEEEEEETTTEEEEEEBSSSCB
T ss_pred ceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeE-EEEecCCCcCCEEEEEcCCCEEEEEEcCCCce
Confidence 4467899998864 4566899999998 32 2 334444455566 899864 377666544444 55555 444 2
Q ss_pred EEEEeecCCcccccccceEEcCC--CcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCe---EEEEecCCCCccc
Q 017520 149 ENFLSYVNGSKLRFANDVVEASD--GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNI---TTLVADGFYFANG 223 (370)
Q Consensus 149 ~~~~~~~~g~~~~~~~~l~~d~~--G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~---~~~~~~~~~~p~g 223 (370)
..+.. ..+. ...++.+++.++ |.+.++.+ .++.|..+|..++. ...+.......+.
T Consensus 90 ~~~~~-~~~h-~~~v~~v~~~p~~~g~~l~s~s-----------------~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~ 150 (297)
T 2pm7_B 90 SQIAV-HAVH-SASVNSVQWAPHEYGPMLLVAS-----------------SDGKVSVVEFKENGTTSPIIIDAHAIGVNS 150 (297)
T ss_dssp CCCEE-ECCC-SSCEEEEEECCGGGCSEEEEEE-----------------TTSEEEEEEBCSSSCBCCEEEECCSSCEEE
T ss_pred EEEEE-eecC-CCceeEEEeCcCCCCcEEEEEE-----------------CCCcEEEEEecCCCceeeeeeecccCccce
Confidence 21111 1111 135788999886 76665533 34677788865442 1222222334567
Q ss_pred eEEccC-------------CCEEEEEeCCc-EEEEEeCCCCCC--ceeeeccCCCCCCCceeECCCC
Q 017520 224 VALSRD-------------EDYVVVCESWK-CRKYWLKGERKG--KLETFAENLPGAPDNINLAPDG 274 (370)
Q Consensus 224 i~~~~d-------------g~~l~v~~~~~-l~~~~~~~~~~~--~~~~~~~~~~g~p~~i~~d~~G 274 (370)
++++++ ++.+..+...+ |..|++...... ....+ ....+....+++++++
T Consensus 151 ~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l-~~H~~~V~~v~~sp~~ 216 (297)
T 2pm7_B 151 ASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTL-EGHSDWVRDVAWSPTV 216 (297)
T ss_dssp EEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEE-CCCSSCEEEEEECCCC
T ss_pred EeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEe-cCCCCceEEEEECCCC
Confidence 788876 45566666666 888887653210 11112 1222334567788875
No 288
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.55 E-value=0.038 Score=51.71 Aligned_cols=205 Identities=12% Similarity=0.041 Sum_probs=109.3
Q ss_pred CcEEEEecCCeEEEEe--CCeEEE-EEecCCCceeceEEcCCCcE-EEEeCCCceEEEc-CCC--eEEEEeecCCccccc
Q 017520 90 GVIYTATRDGWIKRLQ--DGTWVN-WKFIDSQTLVGLTSTKEGHL-IICDNANGLHKVS-EDG--VENFLSYVNGSKLRF 162 (370)
Q Consensus 90 G~l~v~~~~g~I~~~~--~g~~~~-~~~~~~~p~~gl~~d~~G~L-~v~~~~~gi~~~~-~~g--~~~~~~~~~g~~~~~ 162 (370)
..+.+|+.+|.|..++ +++... +....+... ++.+ ++++ +.+..++.|..++ .++ ...+. +. ...
T Consensus 144 ~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~-~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~----~h-~~~ 215 (435)
T 1p22_A 144 QKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVL-CLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLI----HH-CEA 215 (435)
T ss_dssp SEEEEEESSSCEEEEESSSCCEEEEECCCSSCEE-EEEC--CSSEEEEEETTSCEEEEESSSCCEEEEEC----CC-CSC
T ss_pred CEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEE-EEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEc----CC-CCc
Confidence 3566777999999999 555433 333344455 7777 4554 4455444566666 556 33332 11 124
Q ss_pred ccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEE----EEecCCCCccceEEccCCCEEEEEeC
Q 017520 163 ANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITT----LVADGFYFANGVALSRDEDYVVVCES 238 (370)
Q Consensus 163 ~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~----~~~~~~~~p~gi~~~~dg~~l~v~~~ 238 (370)
+..++++ +...++.+ .++.|..+|..++... .+.........+++ +++.++.+..
T Consensus 216 v~~l~~~--~~~l~s~s-----------------~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~ 274 (435)
T 1p22_A 216 VLHLRFN--NGMMVTCS-----------------KDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASG 274 (435)
T ss_dssp EEEEECC--TTEEEEEE-----------------TTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEET
T ss_pred EEEEEEc--CCEEEEee-----------------CCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeC
Confidence 5566664 33333322 3477888887655432 12122223344555 7787888877
Q ss_pred Cc-EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCCEEEEEecCchhHHHhhhcchhHHHHHHhCCccccccccCCCc
Q 017520 239 WK-CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGG 317 (370)
Q Consensus 239 ~~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (370)
.+ |..||+...+ ....+. ...+....+.. +|++.++....
T Consensus 275 dg~i~vwd~~~~~--~~~~~~-~~~~~v~~~~~--~~~~l~~g~~d---------------------------------- 315 (435)
T 1p22_A 275 DRTIKVWNTSTCE--FVRTLN-GHKRGIACLQY--RDRLVVSGSSD---------------------------------- 315 (435)
T ss_dssp TSEEEEEETTTCC--EEEEEE-CCSSCEEEEEE--ETTEEEEEETT----------------------------------
T ss_pred CCeEEEEECCcCc--EEEEEc-CCCCcEEEEEe--CCCEEEEEeCC----------------------------------
Confidence 77 8889876532 122222 22222223444 35544443322
Q ss_pred eEEEEECC-CCcEEEEEeCCCCCccccceeEEEECCEEEEEeCCCCeEEEE
Q 017520 318 AHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIGKV 367 (370)
Q Consensus 318 g~v~~~~~-~g~~~~~~~~~~g~~~~~~t~~~~~~g~L~~gs~~~~~i~~~ 367 (370)
+.|..+|. .++.+..+....+ .++.+...+..|..|+.++ .|.+.
T Consensus 316 g~i~iwd~~~~~~~~~~~~h~~----~v~~~~~~~~~l~sg~~dg-~i~vw 361 (435)
T 1p22_A 316 NTIRLWDIECGACLRVLEGHEE----LVRCIRFDNKRIVSGAYDG-KIKVW 361 (435)
T ss_dssp SCEEEEETTTCCEEEEECCCSS----CEEEEECCSSEEEEEETTS-CEEEE
T ss_pred CeEEEEECCCCCEEEEEeCCcC----cEEEEEecCCEEEEEeCCC-cEEEE
Confidence 34667774 4777777765332 3555555556666666554 34443
No 289
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=97.54 E-value=0.0077 Score=61.03 Aligned_cols=130 Identities=6% Similarity=-0.063 Sum_probs=77.6
Q ss_pred cceEEcCCCcEEEEecCCeEEEEe--CCeEEEEEecCC-Cc-----eeceEEcCCCc-EEEEeCC---------CceEEE
Q 017520 82 EDASMDKNGVIYTATRDGWIKRLQ--DGTWVNWKFIDS-QT-----LVGLTSTKEGH-LIICDNA---------NGLHKV 143 (370)
Q Consensus 82 ~~i~~d~~G~l~v~~~~g~I~~~~--~g~~~~~~~~~~-~p-----~~gl~~d~~G~-L~v~~~~---------~gi~~~ 143 (370)
.++...+||.+++.+ +|.|+.++ +|+.+.+..... .. . ++.+++||+ |.++... ..++.+
T Consensus 20 ~~~~w~~dg~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~ 97 (740)
T 4a5s_A 20 YSLRWISDHEYLYKQ-ENNILVFNAEYGNSSVFLENSTFDEFGHSIN-DYSISPDGQFILLEYNYVKQWRHSYTASYDIY 97 (740)
T ss_dssp CCEEECSSSEEEEEE-TTEEEEEETTTCCEEEEECTTTTTTCCSCCC-EEEECTTSSEEEEEEEEEECSSSCEEEEEEEE
T ss_pred cccEECCCCcEEEEc-CCcEEEEECCCCceEEEEechhhhhhccccc-ceEECCCCCEEEEEECCeeeEEEccceEEEEE
Confidence 457788888766665 89999999 666554433211 11 2 367899997 4443321 124566
Q ss_pred c-CCC-eEEEEeecCCcccccccceEEcCCCc-EEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecCC--
Q 017520 144 S-EDG-VENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGF-- 218 (370)
Q Consensus 144 ~-~~g-~~~~~~~~~g~~~~~~~~l~~d~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~-- 218 (370)
+ .+| .+.+... . ......+++|||+ |.++. ++.|+.+|.++++.+.+....
T Consensus 98 d~~~~~~~~l~~~-~----~~~~~~~~SPdG~~la~~~-------------------~~~i~~~~~~~~~~~~lt~~g~~ 153 (740)
T 4a5s_A 98 DLNKRQLITEERI-P----NNTQWVTWSPVGHKLAYVW-------------------NNDIYVKIEPNLPSYRITWTGKE 153 (740)
T ss_dssp ETTTTEECCSSCC-C----TTEEEEEECSSTTCEEEEE-------------------TTEEEEESSTTSCCEECCSCCBT
T ss_pred ECCCCcEEEcccC-C----CcceeeEECCCCCEEEEEE-------------------CCeEEEEECCCCceEEEcCCCCc
Confidence 6 555 3332111 1 2356779999995 55552 246888888776655443211
Q ss_pred -----------------CCccceEEccCCCEEEEEe
Q 017520 219 -----------------YFANGVALSRDEDYVVVCE 237 (370)
Q Consensus 219 -----------------~~p~gi~~~~dg~~l~v~~ 237 (370)
....++.++|||+.|.+..
T Consensus 154 ~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~ 189 (740)
T 4a5s_A 154 DIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQ 189 (740)
T ss_dssp TTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEE
T ss_pred cceecCcccccccchhcCCCcceEECCCCCEEEEEE
Confidence 1223588999999777653
No 290
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.52 E-value=0.0014 Score=55.57 Aligned_cols=135 Identities=13% Similarity=0.042 Sum_probs=79.8
Q ss_pred ceeceEEcCCCcEEEEeCCCceEEEc-CCC--------eEEEEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccce
Q 017520 119 TLVGLTSTKEGHLIICDNANGLHKVS-EDG--------VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYC 189 (370)
Q Consensus 119 p~~gl~~d~~G~L~v~~~~~gi~~~~-~~g--------~~~~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~ 189 (370)
.. .++++|+|.||.. ....+++++ +++ .+.+-. .| .+....+.+|++|.||+..
T Consensus 43 ~~-~laf~P~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s~t~IG~--~G--w~~F~a~~fD~~G~LYav~----------- 105 (236)
T 1tl2_A 43 FK-FLFLSPGGELYGV-LNDKIYKGTPPTHDNDNWMGRAKKIGN--GG--WNQFQFLFFDPNGYLYAVS----------- 105 (236)
T ss_dssp CS-EEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHCEEEEC--SC--GGGCSEEEECTTSCEEEEE-----------
T ss_pred ce-eEEECCCccEEEE-eCCeEEEECCCCCCcccccccccEecc--cc--cccceEEEECCCCCEEEeC-----------
Confidence 44 7999999999999 455799998 452 122211 12 2235678999999999992
Q ss_pred ecccccCCCceEEEEeCCCCeE-------EEE-ecCCCCccceEEccCCCEEEEEeCCc-EEEEEeC-CCCC---Cceee
Q 017520 190 LDILEGKPHGQLLKYDPSSNIT-------TLV-ADGFYFANGVALSRDEDYVVVCESWK-CRKYWLK-GERK---GKLET 256 (370)
Q Consensus 190 ~~~~~~~~~g~l~~~d~~t~~~-------~~~-~~~~~~p~gi~~~~dg~~l~v~~~~~-l~~~~~~-~~~~---~~~~~ 256 (370)
+|.|+|+++.+..- +.+ ..+.....-|.++|+|. ||... ++ +++-... +... .....
T Consensus 106 --------dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~-Lyav~-dg~lyr~~~P~~~~~~wl~~~~~ 175 (236)
T 1tl2_A 106 --------KDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGY-LYAVH-GQQFYKALPPVSNQDNWLARATK 175 (236)
T ss_dssp --------TTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSC-EEEEE-TTEEEEECCCSSTTCCHHHHCEE
T ss_pred --------CCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCce-EEEEe-CCcEEecCCCCCCCcccccccce
Confidence 37999999843211 111 12233446789999998 88877 55 7663322 1100 00111
Q ss_pred eccCCCCCCCceeECCCCCEEEEE
Q 017520 257 FAENLPGAPDNINLAPDGTFWIAI 280 (370)
Q Consensus 257 ~~~~~~g~p~~i~~d~~G~lwv~~ 280 (370)
+....-..-.-+.++++|+||...
T Consensus 176 ~g~~g~~~yr~l~f~~~G~l~~v~ 199 (236)
T 1tl2_A 176 IGQGGWDTFKFLFFSSVGTLFGVQ 199 (236)
T ss_dssp EESSSGGGEEEEEECTTSCEEEEE
T ss_pred eccCCcceEEEEEECCCCcEEEEe
Confidence 110000001125589999999998
No 291
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.51 E-value=0.028 Score=56.50 Aligned_cols=109 Identities=15% Similarity=0.202 Sum_probs=66.2
Q ss_pred CCcEEEEecCCeEEEEe--CCeEEEEEecCCC------------ceeceEEcCCCcEEEEeCCCceEEEc-CCC-eEEEE
Q 017520 89 NGVIYTATRDGWIKRLQ--DGTWVNWKFIDSQ------------TLVGLTSTKEGHLIICDNANGLHKVS-EDG-VENFL 152 (370)
Q Consensus 89 ~G~l~v~~~~g~I~~~~--~g~~~~~~~~~~~------------p~~gl~~d~~G~L~v~~~~~gi~~~~-~~g-~~~~~ 152 (370)
+|.||+++.++.|+.+| +|+...-...... .. +++++ ++.||++.....|+.+| ++| ...-.
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~-~g~v~v~~~dg~l~AlDa~TG~~~W~~ 147 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNR-GVAVW-KGKVYVGVLDGRLEAIDAKTGQRAWSV 147 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCC-CCEEE-TTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCC-ccEEE-CCEEEEEccCCEEEEEECCCCCEeeee
Confidence 68999999888999999 7875543322110 12 45665 68999998777899999 688 33322
Q ss_pred eec-CCcc-cccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEE
Q 017520 153 SYV-NGSK-LRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITT 212 (370)
Q Consensus 153 ~~~-~g~~-~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~ 212 (370)
... .... ......-.+ .+|.+|++.+...+ ...+.|+.+|.++++..
T Consensus 148 ~~~~~~~~~~~~~~sP~v-~~g~v~vg~~~~~~------------~~~g~v~a~D~~tG~~~ 196 (689)
T 1yiq_A 148 DTRADHKRSYTITGAPRV-VNGKVVIGNGGAEF------------GVRGYVTAYDAETGKEA 196 (689)
T ss_dssp ECCSCTTSCCBCCSCCEE-ETTEEEECCBCTTT------------CCBCEEEEEETTTCCEE
T ss_pred cCcCCCCCCccccCCcEE-ECCEEEEEeCCCcc------------CCCCEEEEEECCCCcEE
Confidence 211 1000 000111122 26889887643211 13578999999888754
No 292
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=97.50 E-value=0.023 Score=50.26 Aligned_cols=179 Identities=11% Similarity=0.094 Sum_probs=96.0
Q ss_pred CcceEEcC--CCc-EEEEecCCeEEEEe--CCe---EEEEEecCCCceeceEEcCC--CcEEE-EeCCCceEEEc-CCC-
Q 017520 81 PEDASMDK--NGV-IYTATRDGWIKRLQ--DGT---WVNWKFIDSQTLVGLTSTKE--GHLII-CDNANGLHKVS-EDG- 147 (370)
Q Consensus 81 P~~i~~d~--~G~-l~v~~~~g~I~~~~--~g~---~~~~~~~~~~p~~gl~~d~~--G~L~v-~~~~~gi~~~~-~~g- 147 (370)
-.++++.+ +|. |..++.||.|..|+ +++ ...+........ ++++.++ |.+++ +..++.|..++ +++
T Consensus 56 V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~-~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~ 134 (297)
T 2pm7_B 56 VWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVN-SVQWAPHEYGPMLLVASSDGKVSVVEFKENG 134 (297)
T ss_dssp EEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEE-EEEECCGGGCSEEEEEETTSEEEEEEBCSSS
T ss_pred eEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCcee-EEEeCcCCCCcEEEEEECCCcEEEEEecCCC
Confidence 35677753 364 55667899999999 453 223322334456 8999886 66555 44444455555 333
Q ss_pred -e-EEEEeecCCcccccccceEEcCC-------------CcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCe--
Q 017520 148 -V-ENFLSYVNGSKLRFANDVVEASD-------------GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNI-- 210 (370)
Q Consensus 148 -~-~~~~~~~~g~~~~~~~~l~~d~~-------------G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~-- 210 (370)
. ..... +. ...++.+++.++ ++++++-+ .++.|..+|..++.
T Consensus 135 ~~~~~~~~---~h-~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs-----------------~D~~v~lwd~~~~~~~ 193 (297)
T 2pm7_B 135 TTSPIIID---AH-AIGVNSASWAPATIEEDGEHNGTKESRKFVTGG-----------------ADNLVKIWKYNSDAQT 193 (297)
T ss_dssp CBCCEEEE---CC-SSCEEEEEECCCC------------CCEEEEEE-----------------TTSCEEEEEEETTTTE
T ss_pred ceeeeeee---cc-cCccceEeecCCcccccccCCCCCCcceEEEEc-----------------CCCcEEEEEEcCCCce
Confidence 2 11111 11 124667777775 34444432 34667777754433
Q ss_pred --EE-EEecCCCCccceEEccCC---CEEEEEeCCc-EEEEEeCCCCCCceeeec--cCCCCCCCceeECCCCCEEEEEe
Q 017520 211 --TT-LVADGFYFANGVALSRDE---DYVVVCESWK-CRKYWLKGERKGKLETFA--ENLPGAPDNINLAPDGTFWIAII 281 (370)
Q Consensus 211 --~~-~~~~~~~~p~gi~~~~dg---~~l~v~~~~~-l~~~~~~~~~~~~~~~~~--~~~~g~p~~i~~d~~G~lwv~~~ 281 (370)
.. .+.........++++|++ +.+..+...+ |..|+++........... ...++....++++++|++.++..
T Consensus 194 ~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~ 273 (297)
T 2pm7_B 194 YVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSG 273 (297)
T ss_dssp EEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEE
T ss_pred EEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEc
Confidence 11 222223346789999985 5455555555 888887653211111111 11222334577889997665543
No 293
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.46 E-value=0.014 Score=58.61 Aligned_cols=110 Identities=13% Similarity=0.123 Sum_probs=66.8
Q ss_pred CCcEEEEecCCeEEEEe--CCeEEEEEecCCC------------ceeceEEcCCCcEEEEeCCCceEEEc-CCC-eEEEE
Q 017520 89 NGVIYTATRDGWIKRLQ--DGTWVNWKFIDSQ------------TLVGLTSTKEGHLIICDNANGLHKVS-EDG-VENFL 152 (370)
Q Consensus 89 ~G~l~v~~~~g~I~~~~--~g~~~~~~~~~~~------------p~~gl~~d~~G~L~v~~~~~gi~~~~-~~g-~~~~~ 152 (370)
+|.||+++.++.|+.+| +|+...-...... .. +++++ ++.+|++.....|+.+| ++| ...-.
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~v~v~~~dg~l~alD~~tG~~~W~~ 143 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNR-GVALW-GDKVYVGTLDGRLIALDAKTGKAIWSQ 143 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCC-CCEEE-BTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCcc-ceEEE-CCEEEEEcCCCEEEEEECCCCCEeeee
Confidence 78999999999999999 7876543322110 13 56665 67999998777899999 788 33322
Q ss_pred eecCCc-ccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEE
Q 017520 153 SYVNGS-KLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTL 213 (370)
Q Consensus 153 ~~~~g~-~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~ 213 (370)
...... .......-.+ .+|.+|++.....+ ...+.|+.+|.++++..-
T Consensus 144 ~~~~~~~~~~~~~~P~v-~~~~v~vg~~~~~~------------~~~g~v~a~D~~tG~~~W 192 (668)
T 1kv9_A 144 QTTDPAKPYSITGAPRV-VKGKVIIGNGGAEY------------GVRGFVSAYDADTGKLAW 192 (668)
T ss_dssp ECSCTTSSCBCCSCCEE-ETTEEEECCBCTTT------------CCBCEEEEEETTTCCEEE
T ss_pred ccCCCCCcceecCCCEE-ECCEEEEeCCCCCc------------CCCCEEEEEECCCCcEEE
Confidence 211100 0011111123 26789888643211 134789999998887643
No 294
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=97.42 E-value=0.012 Score=55.32 Aligned_cols=136 Identities=12% Similarity=0.067 Sum_probs=83.4
Q ss_pred CCCceeceEEcC-CCcEE-EEeCCCceEEEc-CCC-eEEEEeecCCcccccccceEEcC-CCcEEEEeCCCCCCCcccee
Q 017520 116 DSQTLVGLTSTK-EGHLI-ICDNANGLHKVS-EDG-VENFLSYVNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCL 190 (370)
Q Consensus 116 ~~~p~~gl~~d~-~G~L~-v~~~~~gi~~~~-~~g-~~~~~~~~~g~~~~~~~~l~~d~-~G~l~v~d~~~~~~~~~~~~ 190 (370)
..+.. +|+++| ++++. .+..++.|..++ .++ ...+... .+. ...++.|++.| +|++.++.+
T Consensus 119 ~~~V~-~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~-~gH-~~~V~~l~f~p~~~~~l~s~s----------- 184 (435)
T 4e54_B 119 DRRAT-SLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKG-IGA-GGSITGLKFNPLNTNQFYASS----------- 184 (435)
T ss_dssp SSCEE-EEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECC-CSS-SCCCCEEEECSSCTTEEEEEC-----------
T ss_pred CCCEE-EEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEc-cCC-CCCEEEEEEeCCCCCEEEEEe-----------
Confidence 34456 899987 45554 455444466666 444 2222221 121 24688999997 677777754
Q ss_pred cccccCCCceEEEEeCCCCeEEEEecCCC---CccceEEccCCCEEEEEeCCc-EEEEEeCCCCCCceeeeccCCCCCCC
Q 017520 191 DILEGKPHGQLLKYDPSSNITTLVADGFY---FANGVALSRDEDYVVVCESWK-CRKYWLKGERKGKLETFAENLPGAPD 266 (370)
Q Consensus 191 ~~~~~~~~g~l~~~d~~t~~~~~~~~~~~---~p~gi~~~~dg~~l~v~~~~~-l~~~~~~~~~~~~~~~~~~~~~g~p~ 266 (370)
.++.|..+|.+++....+..... ....++++++++.++.+...+ |..|++++..... +. .......
T Consensus 185 ------~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~~~---~~-~h~~~v~ 254 (435)
T 4e54_B 185 ------MEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKELWN---LR-MHKKKVT 254 (435)
T ss_dssp ------SSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCBCCC---SB-CCSSCEE
T ss_pred ------CCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcceeEE---Ee-cccceEE
Confidence 35788899998776665543322 235689999999777777766 9999987643221 11 1222345
Q ss_pred ceeECCCCC
Q 017520 267 NINLAPDGT 275 (370)
Q Consensus 267 ~i~~d~~G~ 275 (370)
.+++++++.
T Consensus 255 ~v~~~p~~~ 263 (435)
T 4e54_B 255 HVALNPCCD 263 (435)
T ss_dssp EEEECTTCS
T ss_pred eeeecCCCc
Confidence 577888775
No 295
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.41 E-value=0.085 Score=52.80 Aligned_cols=42 Identities=12% Similarity=0.241 Sum_probs=29.2
Q ss_pred eEEEEECC-CCcEEEEEeCCCCCccccceeEEEECCEEEEEeCCC
Q 017520 318 AHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTS 361 (370)
Q Consensus 318 g~v~~~~~-~g~~~~~~~~~~g~~~~~~t~~~~~~g~L~~gs~~~ 361 (370)
+.+..+|. .|++++.+..+.+.....++. ..+|++|++.-.+
T Consensus 479 g~l~a~d~~tG~~l~~~~~~~~~~~~p~~~--~~~G~~yva~~~G 521 (668)
T 1kv9_A 479 GQMHAYSADKGEALWQFEAQSGIVAAPMTF--ELAGRQYVAIMAG 521 (668)
T ss_dssp SEEEEEETTTCCEEEEEECSSCCCSCCEEE--EETTEEEEEEEEC
T ss_pred ccchhhhhhcChhheEecCCCCcccCceEE--EECCEEEEEEEec
Confidence 56899985 699999998876543333322 5789999875543
No 296
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=97.37 E-value=0.039 Score=55.86 Aligned_cols=179 Identities=12% Similarity=0.092 Sum_probs=92.6
Q ss_pred ceEEcCCCcEE--EEecCC----eEEEEe--CCeEEEEEecCCCceeceEEcCCCcEEEEeCCC--------------ce
Q 017520 83 DASMDKNGVIY--TATRDG----WIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGHLIICDNAN--------------GL 140 (370)
Q Consensus 83 ~i~~d~~G~l~--v~~~~g----~I~~~~--~g~~~~~~~~~~~p~~gl~~d~~G~L~v~~~~~--------------gi 140 (370)
++++.+||+.. ..+.+| .|+.++ +|+............ ++++.+|..|+++.... .|
T Consensus 167 ~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~~~~-~~~wspD~~l~~~~~~~~~~~~~~~~~~~~~~v 245 (741)
T 1yr2_A 167 AWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWVKFS-GLAWLGNDALLYSRFAEPKEGQAFQALNYNQTV 245 (741)
T ss_dssp EEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEEESC-CCEESTTSEEEEEECCCC--------CCCCCEE
T ss_pred eEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCCceec-cEEEECCCEEEEEEecCcccccccccCCCCCEE
Confidence 45777888633 333333 488888 565543211111124 78888884466665332 26
Q ss_pred EEEc-CCC-e--EEEEeecCCcccccccceEEcCCCc-EEEEeCCCCCCCccceecccccCCCceEEEEeCCCC--e-EE
Q 017520 141 HKVS-EDG-V--ENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSN--I-TT 212 (370)
Q Consensus 141 ~~~~-~~g-~--~~~~~~~~g~~~~~~~~l~~d~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~--~-~~ 212 (370)
++.+ .++ . ..+... .+.+ ....++.+++||+ |.++.... ......|+.+|.+++ + .+
T Consensus 246 ~~~~lgt~~~~~~lv~~~-~~~~-~~~~~~~~SpDG~~l~~~~~~~-------------~~~~~~l~~~d~~~~~~~~~~ 310 (741)
T 1yr2_A 246 WLHRLGTPQSADQPVFAT-PELP-KRGHGASVSSDGRWVVITSSEG-------------TDPVNTVHVARVTNGKIGPVT 310 (741)
T ss_dssp EEEETTSCGGGCEEEECC-TTCT-TCEEEEEECTTSCEEEEEEECT-------------TCSCCEEEEEEEETTEECCCE
T ss_pred EEEECCCCchhCEEEecc-CCCC-eEEEEEEECCCCCEEEEEEEcc-------------CCCcceEEEEECCCCCCcccE
Confidence 6666 333 1 222221 1111 1345788999996 55553210 012457899988766 4 55
Q ss_pred EEecCCCCccceEEccCCCEEEEEeCC----c-EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCCEEEEE
Q 017520 213 LVADGFYFANGVALSRDEDYVVVCESW----K-CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAI 280 (370)
Q Consensus 213 ~~~~~~~~p~gi~~~~dg~~l~v~~~~----~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~ 280 (370)
.+.......... +++||+.+|+.... . |++++++++. +..+.+.........++..+ ++.+++..
T Consensus 311 ~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~-~~~~~l~~~~~~~l~~~~~~-~~~lv~~~ 380 (741)
T 1yr2_A 311 ALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGST-PRFDTVVPESKDNLESVGIA-GNRLFASY 380 (741)
T ss_dssp EEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSS-CEEEEEECCCSSEEEEEEEE-BTEEEEEE
T ss_pred EecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCc-cccEEEecCCCCeEEEEEEE-CCEEEEEE
Confidence 554433322233 45888888877542 1 9999987642 23333332222222334455 44555554
No 297
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.35 E-value=0.023 Score=52.01 Aligned_cols=134 Identities=12% Similarity=0.027 Sum_probs=78.6
Q ss_pred CCeEEEEe--CCeEEEEEecCCCceeceEEcC-CCc-EEEEeCC------CceEEEcC-CC-eEEEEeecCCcccccccc
Q 017520 98 DGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTK-EGH-LIICDNA------NGLHKVSE-DG-VENFLSYVNGSKLRFAND 165 (370)
Q Consensus 98 ~g~I~~~~--~g~~~~~~~~~~~p~~gl~~d~-~G~-L~v~~~~------~gi~~~~~-~g-~~~~~~~~~g~~~~~~~~ 165 (370)
+..|+.++ +++...+........ .+.+++ +|. |+++... ..|+.++. .+ .+.+.. ..+...+..
T Consensus 167 ~~~l~~~d~~~g~~~~~~~~~~~~~-~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~---~~~~~~~~~ 242 (396)
T 3c5m_A 167 TCRLIKVDIETGELEVIHQDTAWLG-HPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKE---HAEGESCTH 242 (396)
T ss_dssp CEEEEEEETTTCCEEEEEEESSCEE-EEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSC---CCTTEEEEE
T ss_pred cceEEEEECCCCcEEeeccCCcccc-cceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeec---cCCCccccc
Confidence 45688888 566655554444455 788888 675 5544322 25888884 34 444322 111124567
Q ss_pred eEEcCCCc-EEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecCCCCccceEEcc-CCCEEEEEeC-----
Q 017520 166 VVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSR-DEDYVVVCES----- 238 (370)
Q Consensus 166 l~~d~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~p~gi~~~~-dg~~l~v~~~----- 238 (370)
+++++||+ |++.... .....+.|+++|.++++.+.+... ...+ +++++ ||+.++.+..
T Consensus 243 ~~~spdg~~l~~~~~~-------------~~~~~~~l~~~d~~~g~~~~l~~~-~~~~-~~~s~~dg~~l~~~~~~~p~~ 307 (396)
T 3c5m_A 243 EFWIPDGSAMAYVSYF-------------KGQTDRVIYKANPETLENEEVMVM-PPCS-HLMSNFDGSLMVGDGCDAPVD 307 (396)
T ss_dssp EEECTTSSCEEEEEEE-------------TTTCCEEEEEECTTTCCEEEEEEC-CSEE-EEEECSSSSEEEEEECCC---
T ss_pred eEECCCCCEEEEEecC-------------CCCccceEEEEECCCCCeEEeeeC-CCCC-CCccCCCCceEEEecCCccee
Confidence 89999996 6555321 001124599999988876554321 1222 78999 9996655431
Q ss_pred ----------C-c-EEEEEeCCCC
Q 017520 239 ----------W-K-CRKYWLKGER 250 (370)
Q Consensus 239 ----------~-~-l~~~~~~~~~ 250 (370)
+ . |+++++++.+
T Consensus 308 ~~~~~~~~~~~~~~i~~~d~~~~~ 331 (396)
T 3c5m_A 308 VADADSYNIENDPFLYVLNTKAKS 331 (396)
T ss_dssp -------CCCCCCEEEEEETTTTB
T ss_pred eccccccccCCCCcEEEEecccCc
Confidence 1 3 9999987643
No 298
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=97.32 E-value=0.02 Score=51.63 Aligned_cols=134 Identities=10% Similarity=-0.008 Sum_probs=75.4
Q ss_pred CCeEEEEe--CCeEEEEEecCCCceeceEEcCCCc-EEEEeCC-----CceEEEc-CCC-eEEEEeecCCcccccccceE
Q 017520 98 DGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGH-LIICDNA-----NGLHKVS-EDG-VENFLSYVNGSKLRFANDVV 167 (370)
Q Consensus 98 ~g~I~~~~--~g~~~~~~~~~~~p~~gl~~d~~G~-L~v~~~~-----~gi~~~~-~~g-~~~~~~~~~g~~~~~~~~l~ 167 (370)
.+.|+.++ +++...+ .... .++++|||+ |+.+... ..|+.++ .+| ...+... . . +..++
T Consensus 42 ~~~l~~~d~~~~~~~~l----~~~~-~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~-~----~-~~~~~ 110 (347)
T 2gop_A 42 ENTIVIENLKNNARRFI----ENAT-MPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEA-K----N-IRSLE 110 (347)
T ss_dssp EEEEEEEETTTCCEEEE----ESCE-EEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEE-S----E-EEEEE
T ss_pred cceEEEEeCCCCceEEc----ccCC-CeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcC-C----C-cccee
Confidence 45688888 4555444 3455 789999996 4443322 1377887 556 4444322 1 1 66789
Q ss_pred EcCCCc-EEEEeCCCCC--CC---ccce--ec--ccccCCCceEEEEeCCCCeE-EEEecCCCCccceEEccCCCEEEEE
Q 017520 168 EASDGS-LYFTVSSSKY--LP---HEYC--LD--ILEGKPHGQLLKYDPSSNIT-TLVADGFYFANGVALSRDEDYVVVC 236 (370)
Q Consensus 168 ~d~~G~-l~v~d~~~~~--~~---~~~~--~~--~~~~~~~g~l~~~d~~t~~~-~~~~~~~~~p~gi~~~~dg~~l~v~ 236 (370)
++|||+ |+++.....- .. .... .+ -........|+++|.++++. +.+... ....+++++|| .++.+
T Consensus 111 wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~~--~~~~~~~spdg-~~~~~ 187 (347)
T 2gop_A 111 WNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEKP--RFSSGIWHRDK-IVVNV 187 (347)
T ss_dssp ECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEEE--TTCEEEEETTE-EEEEE
T ss_pred ECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecCC--CcccccCCCCe-EEEEE
Confidence 999995 6666321000 00 0000 00 00001135799999988877 555442 66788999999 66666
Q ss_pred eC---------Cc-EEEEE
Q 017520 237 ES---------WK-CRKYW 245 (370)
Q Consensus 237 ~~---------~~-l~~~~ 245 (370)
.. .. |+.++
T Consensus 188 ~~~~~~~~~~~~~~l~~~d 206 (347)
T 2gop_A 188 PHREIIPQYFKFWDIYIWE 206 (347)
T ss_dssp ECCCSSCCSSCCEEEEEEE
T ss_pred ecccccccccccccEEEeC
Confidence 43 22 77777
No 299
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=97.29 E-value=0.049 Score=50.73 Aligned_cols=82 Identities=9% Similarity=0.050 Sum_probs=54.6
Q ss_pred CCceEEEEeCCCCeEEEEecCCCCccceEEccCCCEEEEEeC--Cc-EEEEEeCCCCCCceeeeccCCCCCCCceeECCC
Q 017520 197 PHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCES--WK-CRKYWLKGERKGKLETFAENLPGAPDNINLAPD 273 (370)
Q Consensus 197 ~~g~l~~~d~~t~~~~~~~~~~~~p~gi~~~~dg~~l~v~~~--~~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~ 273 (370)
.++.|..||..+++.............++++++++.++.+.. .+ |..|+....+ ....+. ...+....++++++
T Consensus 299 ~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~--~v~~l~-gH~~~V~~l~~spd 375 (420)
T 4gga_A 299 SDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMA--KVAELK-GHTSRVLSLTMSPD 375 (420)
T ss_dssp TTCEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCC--EEEEEC-CCSSCEEEEEECTT
T ss_pred CCCEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCc--EEEEEc-CCCCCEEEEEEcCC
Confidence 457788899988877665555566778889999998777652 34 8888875431 222222 23334556889999
Q ss_pred CCEEEEEe
Q 017520 274 GTFWIAII 281 (370)
Q Consensus 274 G~lwv~~~ 281 (370)
|++.++..
T Consensus 376 g~~l~S~s 383 (420)
T 4gga_A 376 GATVASAA 383 (420)
T ss_dssp SSCEEEEE
T ss_pred CCEEEEEe
Confidence 97666543
No 300
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=97.24 E-value=0.072 Score=53.48 Aligned_cols=171 Identities=8% Similarity=0.027 Sum_probs=86.6
Q ss_pred ceEEcCCCc--EEEEecCC----eEEEEe--CCeEEEEEecCCCceeceEEcCCCc-EEEEeCCC-------------ce
Q 017520 83 DASMDKNGV--IYTATRDG----WIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGH-LIICDNAN-------------GL 140 (370)
Q Consensus 83 ~i~~d~~G~--l~v~~~~g----~I~~~~--~g~~~~~~~~~~~p~~gl~~d~~G~-L~v~~~~~-------------gi 140 (370)
++++.+||+ +|..+..| .|+.++ +|+............ ++++. ||+ |+.+.... .|
T Consensus 133 ~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~-~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v 210 (693)
T 3iuj_A 133 QLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFS-GISWL-GNEGFFYSSYDKPDGSELSARTDQHKV 210 (693)
T ss_dssp EEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESC-CCEEE-TTTEEEEEESSCCC-------CCCCEE
T ss_pred EEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceec-cEEEe-CCCEEEEEEecCcccccccccCCCcEE
Confidence 456778886 33343333 477777 566433221111123 67787 775 66654431 26
Q ss_pred EEEc-CCC---eEEEEeecCC-cccccccceEEcCCCc-EEEEeCCCCCCCccceecccccCCCceEEEEeCCCC--eEE
Q 017520 141 HKVS-EDG---VENFLSYVNG-SKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSN--ITT 212 (370)
Q Consensus 141 ~~~~-~~g---~~~~~~~~~g-~~~~~~~~l~~d~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~--~~~ 212 (370)
++.+ .++ -..+... .+ .+ ....++.+++||+ |+++.... .....|+.+|.+++ ..+
T Consensus 211 ~~~~lgt~~~~~~~v~~~-~~~~~-~~~~~~~~SpDg~~l~~~~~~~--------------~~~~~i~~~d~~~~~~~~~ 274 (693)
T 3iuj_A 211 YFHRLGTAQEDDRLVFGA-IPAQH-HRYVGATVTEDDRFLLISAANS--------------TSGNRLYVKDLSQENAPLL 274 (693)
T ss_dssp EEEETTSCGGGCEEEESC-SGGGC-CSEEEEEECTTSCEEEEEEESS--------------SSCCEEEEEETTSTTCCCE
T ss_pred EEEECCCCcccceEEEec-CCCCC-eEEEEEEEcCCCCEEEEEEccC--------------CCCcEEEEEECCCCCCceE
Confidence 6655 232 1222221 11 11 1234678899996 55554321 12357899987655 455
Q ss_pred EEecCCCCccceEEccCCCEEEEEeCC----c-EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCC
Q 017520 213 LVADGFYFANGVALSRDEDYVVVCESW----K-CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGT 275 (370)
Q Consensus 213 ~~~~~~~~p~gi~~~~dg~~l~v~~~~----~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~ 275 (370)
.+......... .++++|+.+|+.... . |++++++++...+.+.+..... +.+.++.+|+
T Consensus 275 ~l~~~~~~~~~-~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~---~~~~~s~~g~ 338 (693)
T 3iuj_A 275 TVQGDLDADVS-LVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQ---QVLTVHSGSG 338 (693)
T ss_dssp EEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCS---SCEEEEEETT
T ss_pred EEeCCCCceEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCC---CEEEEEEECC
Confidence 55443222222 267777777776532 2 9999987653333344443222 2224455554
No 301
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=97.21 E-value=0.0098 Score=54.37 Aligned_cols=132 Identities=17% Similarity=0.111 Sum_probs=78.5
Q ss_pred ecCCeEEEEe--CCe-----------------EEEEEecCCCceeceEEcCCCcEEEEeCCCc--eEEEc-CCC--eEEE
Q 017520 96 TRDGWIKRLQ--DGT-----------------WVNWKFIDSQTLVGLTSTKEGHLIICDNANG--LHKVS-EDG--VENF 151 (370)
Q Consensus 96 ~~~g~I~~~~--~g~-----------------~~~~~~~~~~p~~gl~~d~~G~L~v~~~~~g--i~~~~-~~g--~~~~ 151 (370)
+.+|.|..++ +++ ...+....+... +++++++|+++++....+ |..++ .++ +..+
T Consensus 156 ~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~-~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~ 234 (355)
T 3vu4_A 156 FNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIK-MVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREF 234 (355)
T ss_dssp SCTTCEEEEECCC------------------CCEEECCCSSCEE-EEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEE
T ss_pred CcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceE-EEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEE
Confidence 4677788888 333 334444445567 899999998777654545 55556 566 4433
Q ss_pred EeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeE---EEEe-------------
Q 017520 152 LSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNIT---TLVA------------- 215 (370)
Q Consensus 152 ~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~---~~~~------------- 215 (370)
.. +.....++.++++++|+..++.+ .++.|..||...+.. ..+.
T Consensus 235 ~~---g~h~~~v~~~~~s~~~~~l~s~s-----------------~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (355)
T 3vu4_A 235 RR---GLDRADVVDMKWSTDGSKLAVVS-----------------DKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWS 294 (355)
T ss_dssp EC---TTCCSCEEEEEECTTSCEEEEEE-----------------TTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSC
T ss_pred Ec---CCCCCcEEEEEECCCCCEEEEEE-----------------CCCEEEEEEccCCCCcccccccceeeccccccccc
Confidence 21 21124678999999998777654 346777777643321 1100
Q ss_pred -------cC-CCCccceEEccCCCEEEEEeCCc-EEEEEeCC
Q 017520 216 -------DG-FYFANGVALSRDEDYVVVCESWK-CRKYWLKG 248 (370)
Q Consensus 216 -------~~-~~~p~gi~~~~dg~~l~v~~~~~-l~~~~~~~ 248 (370)
.. ......+++++|++.+++....+ +.+|++..
T Consensus 295 ~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~ 336 (355)
T 3vu4_A 295 LCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVF 336 (355)
T ss_dssp SEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEE
T ss_pred eeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEc
Confidence 00 00114578999998777776666 77776543
No 302
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=97.17 E-value=0.032 Score=55.98 Aligned_cols=181 Identities=8% Similarity=0.034 Sum_probs=93.3
Q ss_pred cceEEcCCCcEE--EEecC----CeEEEEe--CCeEE-EEEecCCCceeceEEcCCCc-EEEEeCCCc------------
Q 017520 82 EDASMDKNGVIY--TATRD----GWIKRLQ--DGTWV-NWKFIDSQTLVGLTSTKEGH-LIICDNANG------------ 139 (370)
Q Consensus 82 ~~i~~d~~G~l~--v~~~~----g~I~~~~--~g~~~-~~~~~~~~p~~gl~~d~~G~-L~v~~~~~g------------ 139 (370)
.++++.+||+.. ..+.. ..|+.++ +|+.. .-........ ++++++||+ |+.+.....
T Consensus 124 ~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~~-~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~ 202 (695)
T 2bkl_A 124 GTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKYA-TPKWTPDSKGFYYEWLPTDPSIKVDERPGYT 202 (695)
T ss_dssp EEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTTC-CCEECTTSSEEEEEECCCCTTSCGGGGGGGC
T ss_pred EEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCccccc-ceEEecCCCEEEEEEecCCCCCccccCCCCC
Confidence 345777888643 33322 4688888 55543 1001111125 789999997 444443322
Q ss_pred -eEEEc-CCC-e-EEEEeecCCcccccccceEEcCCCc-EEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEE
Q 017520 140 -LHKVS-EDG-V-ENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLV 214 (370)
Q Consensus 140 -i~~~~-~~g-~-~~~~~~~~g~~~~~~~~l~~d~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~ 214 (370)
|++++ .++ . ..+.....+. ......+.+++||+ |.++.... .....|+.++..++..+.+
T Consensus 203 ~v~~~~l~t~~~~~~lv~~~~~~-~~~~~~~~~SpDG~~l~~~~~~~--------------~~~~~l~~~~~~~~~~~~l 267 (695)
T 2bkl_A 203 TIRYHTLGTEPSKDTVVHERTGD-PTTFLQSDLSRDGKYLFVYILRG--------------WSENDVYWKRPGEKDFRLL 267 (695)
T ss_dssp EEEEEETTSCGGGCEEEECCCCC-TTCEEEEEECTTSCCEEEEEEET--------------TTEEEEEEECTTCSSCEEE
T ss_pred EEEEEECCCCchhceEEEecCCC-CEEEEEEEECCCCCEEEEEEeCC--------------CCceEEEEEcCCCCceEEe
Confidence 77777 444 2 1222111111 12455788999995 55553210 0234788888766666666
Q ss_pred ecCCCCccceEEccCCCEEEEEeC-C---c-EEEEEeCCCCCCceeeeccCC-CCCCCceeECCCCCEEEEEe
Q 017520 215 ADGFYFANGVALSRDEDYVVVCES-W---K-CRKYWLKGERKGKLETFAENL-PGAPDNINLAPDGTFWIAII 281 (370)
Q Consensus 215 ~~~~~~p~gi~~~~dg~~l~v~~~-~---~-l~~~~~~~~~~~~~~~~~~~~-~g~p~~i~~d~~G~lwv~~~ 281 (370)
............ ++|+ +|+... . . |++++++++.....+.+.... .....++.++ ++.+++...
T Consensus 268 ~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~ 337 (695)
T 2bkl_A 268 VKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYL 337 (695)
T ss_dssp EECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEE
T ss_pred ecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEE
Confidence 544333333433 6777 666554 2 2 999988654321223333221 1112345555 556665543
No 303
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=97.17 E-value=0.15 Score=47.30 Aligned_cols=142 Identities=9% Similarity=0.029 Sum_probs=86.4
Q ss_pred cceEEcCCCcEEEEecCCeEEEEe--CCeEEEEEe---cCCCceeceEEcCCCcEEEE-eCCCceEEEc-CCC--eEEEE
Q 017520 82 EDASMDKNGVIYTATRDGWIKRLQ--DGTWVNWKF---IDSQTLVGLTSTKEGHLIIC-DNANGLHKVS-EDG--VENFL 152 (370)
Q Consensus 82 ~~i~~d~~G~l~v~~~~g~I~~~~--~g~~~~~~~---~~~~p~~gl~~d~~G~L~v~-~~~~gi~~~~-~~g--~~~~~ 152 (370)
..|...+++.|-+|. ++.|+.|+ +|+...... ...... +++++++|+++++ ..++.|..++ .++ +..+
T Consensus 109 ~~l~wS~~n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~-sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~- 185 (420)
T 4gga_A 109 NLVDWSSGNVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYIS-SVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNM- 185 (420)
T ss_dssp BCEEECTTSEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEE-EEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE-
T ss_pred eeEEECCCCEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEE-EEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEE-
Confidence 446666666566665 88999999 777654433 223456 9999999986554 4434455566 566 3322
Q ss_pred eecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCe--EEEEecCCCCccceEEccCC
Q 017520 153 SYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNI--TTLVADGFYFANGVALSRDE 230 (370)
Q Consensus 153 ~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~--~~~~~~~~~~p~gi~~~~dg 230 (370)
.+.. ..+..+. .++++.++.+ .++.+..+|..... +..+........++.+++++
T Consensus 186 ---~~h~-~~v~~~s--~~~~~l~sgs-----------------~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g 242 (420)
T 4gga_A 186 ---TSHS-ARVGSLS--WNSYILSSGS-----------------RSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDG 242 (420)
T ss_dssp ---CCCS-SCEEEEE--EETTEEEEEE-----------------TTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTS
T ss_pred ---eCCC-CceEEEe--eCCCEEEEEe-----------------CCCceeEeeecccceeeEEecccccceeeeeecCCC
Confidence 1211 1233333 4566555533 34667777765432 23333444556788999999
Q ss_pred CEEEEEeCCc-EEEEEeCCC
Q 017520 231 DYVVVCESWK-CRKYWLKGE 249 (370)
Q Consensus 231 ~~l~v~~~~~-l~~~~~~~~ 249 (370)
+.+......+ +..++....
T Consensus 243 ~~l~s~~~D~~v~i~~~~~~ 262 (420)
T 4gga_A 243 RHLASGGNDNLVNVWPSAPG 262 (420)
T ss_dssp SEEEEEETTSCEEEEESSCC
T ss_pred CeeeeeeccccceEEeeccc
Confidence 9777777777 888887543
No 304
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.17 E-value=0.085 Score=51.86 Aligned_cols=57 Identities=14% Similarity=0.139 Sum_probs=41.2
Q ss_pred CCcEEEEecCCeEEEEe--CCeEEEEEecCCC----------ceeceEEcCCCcEEEEeCCCceEEEc-CCC
Q 017520 89 NGVIYTATRDGWIKRLQ--DGTWVNWKFIDSQ----------TLVGLTSTKEGHLIICDNANGLHKVS-EDG 147 (370)
Q Consensus 89 ~G~l~v~~~~g~I~~~~--~g~~~~~~~~~~~----------p~~gl~~d~~G~L~v~~~~~gi~~~~-~~g 147 (370)
+|.||+++..++|+.+| +|+...-...... .. ++++. ++.+|++.....|+.+| ++|
T Consensus 68 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~-g~a~~-~~~v~~~t~dg~l~AlD~~TG 137 (582)
T 1flg_A 68 DGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNR-GAAIY-GDKVFFGTLDASVVALNKNTG 137 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCC-CCEEE-TTEEEEEETTTEEEEEESSSC
T ss_pred CCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCC-ccEEE-CCEEEEEeCCCEEEEEECCCC
Confidence 68999999756699999 7875533322111 13 56664 68999998777899999 688
No 305
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=97.15 E-value=0.064 Score=50.59 Aligned_cols=146 Identities=8% Similarity=0.051 Sum_probs=87.2
Q ss_pred CcceEEcC-CCcEEEEecCCeEEEEe-C------------CeEEEE-----EecCCCceeceEEcCCCcEEE----EeCC
Q 017520 81 PEDASMDK-NGVIYTATRDGWIKRLQ-D------------GTWVNW-----KFIDSQTLVGLTSTKEGHLII----CDNA 137 (370)
Q Consensus 81 P~~i~~d~-~G~l~v~~~~g~I~~~~-~------------g~~~~~-----~~~~~~p~~gl~~d~~G~L~v----~~~~ 137 (370)
-..+++.+ .|.++++..+| |..++ . ...... ....+.+. +++++++|++++ +...
T Consensus 39 ~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~l~~spdg~~lav~~~sgs~ 116 (434)
T 2oit_A 39 SSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIH-HLALSCDNLTLSACMMSSEY 116 (434)
T ss_dssp CBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEE-EEEECTTSCEEEEEEEETTT
T ss_pred ccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCccc-EEEEcCCCCEEEEEEeccCC
Confidence 45678876 45666776665 66654 1 011111 11223466 899999998665 3333
Q ss_pred Cc-eEEEc-CCC----------eEEEEeecCCcccccccceEEcCC-CcEEEEeCCCCCCCccceecccccCCCceEEEE
Q 017520 138 NG-LHKVS-EDG----------VENFLSYVNGSKLRFANDVVEASD-GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKY 204 (370)
Q Consensus 138 ~g-i~~~~-~~g----------~~~~~~~~~g~~~~~~~~l~~d~~-G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~ 204 (370)
.+ |..++ .++ +..+ ....+. ...+.++++.|+ ++++++.+ .++.|..|
T Consensus 117 d~~v~iwd~~~~~~~~~~~~~~~~~~-~~~~~h-~~~V~~v~~~p~~~~~las~s-----------------~Dg~v~iw 177 (434)
T 2oit_A 117 GSIIAFFDVRTFSNEAKQQKRPFAYH-KLLKDA-GGMVIDMKWNPTVPSMVAVCL-----------------ADGSIAVL 177 (434)
T ss_dssp EEEEEEEEHHHHHCTTCSSCCCSEEE-ECCCSG-GGSEEEEEECSSCTTEEEEEE-----------------TTSCEEEE
T ss_pred CceEEEEEccccccCCcCCcceeeee-eccCCC-CCceEEEEECCCCCCEEEEEE-----------------CCCeEEEE
Confidence 33 44444 211 1111 111111 246788999997 67777643 35789999
Q ss_pred eCCCCeEEEEe-cCCCCccceEEccCCCEEEEEeCCc-EEEEEeC
Q 017520 205 DPSSNITTLVA-DGFYFANGVALSRDEDYVVVCESWK-CRKYWLK 247 (370)
Q Consensus 205 d~~t~~~~~~~-~~~~~p~gi~~~~dg~~l~v~~~~~-l~~~~~~ 247 (370)
|..++...... ........++++++|+.++++...+ |..|+++
T Consensus 178 D~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~ 222 (434)
T 2oit_A 178 QVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT 222 (434)
T ss_dssp EESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT
T ss_pred EcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC
Confidence 98766443222 2233567899999999888888777 8889876
No 306
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=97.14 E-value=0.0058 Score=59.41 Aligned_cols=175 Identities=11% Similarity=0.012 Sum_probs=100.3
Q ss_pred CCcceEEcCC------C-cEEEEecCCeEEEEe--CCeE------------EEEEecCCCceeceEEcCCCcEEEEeCCC
Q 017520 80 HPEDASMDKN------G-VIYTATRDGWIKRLQ--DGTW------------VNWKFIDSQTLVGLTSTKEGHLIICDNAN 138 (370)
Q Consensus 80 ~P~~i~~d~~------G-~l~v~~~~g~I~~~~--~g~~------------~~~~~~~~~p~~gl~~d~~G~L~v~~~~~ 138 (370)
...++++.++ + .|..++.+|.|..|+ ++.. ..+........ ++++.+++.|..+..++
T Consensus 209 ~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~-sv~~s~~~~lasgs~Dg 287 (524)
T 2j04_B 209 EVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLIT-TFDFLSPTTVVCGFKNG 287 (524)
T ss_dssp SEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEE-EEEESSSSEEEEEETTS
T ss_pred cEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEE-EEEecCCCeEEEEeCCC
Confidence 3456777764 3 444566899999998 3321 12222234456 88998776666666555
Q ss_pred ceEEEc-CCC---eEEEEeecCCcccccccce--EEcCCC-cEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeE
Q 017520 139 GLHKVS-EDG---VENFLSYVNGSKLRFANDV--VEASDG-SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNIT 211 (370)
Q Consensus 139 gi~~~~-~~g---~~~~~~~~~g~~~~~~~~l--~~d~~G-~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~ 211 (370)
.|..++ .++ ...+... ...+.++ ++.++| ++.++.+ .++.|..+|..+++.
T Consensus 288 tV~lWD~~~~~~~~~~~~~H-----~~~V~sv~~~~s~~g~~~laS~S-----------------~D~tvklWD~~~~~~ 345 (524)
T 2j04_B 288 FVAEFDLTDPEVPSFYDQVH-----DSYILSVSTAYSDFEDTVVSTVA-----------------VDGYFYIFNPKDIAT 345 (524)
T ss_dssp EEEEEETTBCSSCSEEEECS-----SSCEEEEEEECCTTSCCEEEEEE-----------------TTSEEEEECGGGHHH
T ss_pred EEEEEECCCCCCceEEeecc-----cccEEEEEEEcCCCCCeEEEEec-----------------cCCeEEEEECCCCCc
Confidence 566666 444 2222111 1356777 456777 7777754 457888888765432
Q ss_pred E-EEecCC--CCccceEEccCCCEEEEEeCCc-EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCCEEEEE
Q 017520 212 T-LVADGF--YFANGVALSRDEDYVVVCESWK-CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAI 280 (370)
Q Consensus 212 ~-~~~~~~--~~p~gi~~~~dg~~l~v~~~~~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~ 280 (370)
. .+.... .....++++|+++.+..+...+ |..+++..... ...+. ...+....++++++|.+.++.
T Consensus 346 ~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~--~~~l~-gH~~~V~sva~Sp~g~~l~Sg 415 (524)
T 2j04_B 346 TKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFA--VHPLV-SRETTITAIGVSRLHPMVLAG 415 (524)
T ss_dssp HCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTC--CEEEE-ECSSCEEEEECCSSCCBCEEE
T ss_pred ccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECccccc--ceeee-cCCCceEEEEeCCCCCeEEEE
Confidence 1 111111 1246799999998655555555 88888654321 12222 233335567888888755443
No 307
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=97.14 E-value=0.14 Score=46.43 Aligned_cols=194 Identities=11% Similarity=0.040 Sum_probs=100.3
Q ss_pred CCCcceEEcCCCcEEEEecCCeEEEEe--CCeEEEEEecCCCceeceEEcCCCcEE-EEeCC-CceEEEc-CCC--eEEE
Q 017520 79 NHPEDASMDKNGVIYTATRDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGHLI-ICDNA-NGLHKVS-EDG--VENF 151 (370)
Q Consensus 79 ~~P~~i~~d~~G~l~v~~~~g~I~~~~--~g~~~~~~~~~~~p~~gl~~d~~G~L~-v~~~~-~gi~~~~-~~g--~~~~ 151 (370)
..-.++++++||.+.++..+.++..|+ .++........ ... .+.+..++++. ++... +.|..++ .++ +..+
T Consensus 20 ~~V~~v~fs~dg~~la~g~~~~~~iw~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~ 97 (355)
T 3vu4_A 20 NPVTDYEFNQDQSCLILSTLKSFEIYNVHPVAHIMSQEMR-HLS-KVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRI 97 (355)
T ss_dssp CCCCEEEECTTSSEEEEECSSEEEEEEETTEEEEEEEECS-CCC-EEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEE
T ss_pred CceEEEEECCCCCEEEEEcCCEEEEEecCCcceeeeeecC-CeE-EEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEE
Confidence 356789999999876655455677777 33322222212 233 45666666544 33333 3455556 556 3332
Q ss_pred EeecCCcccccccceEEcC-------CCcEEEEeCCCC-CCCccce-----------ecccc-cCCCceEEEEeCCCCe-
Q 017520 152 LSYVNGSKLRFANDVVEAS-------DGSLYFTVSSSK-YLPHEYC-----------LDILE-GKPHGQLLKYDPSSNI- 210 (370)
Q Consensus 152 ~~~~~g~~~~~~~~l~~d~-------~G~l~v~d~~~~-~~~~~~~-----------~~~~~-~~~~g~l~~~d~~t~~- 210 (370)
. .. ..+..+.+++ ++.+++-+.... -....+. ..... ...+|.|..+|..++.
T Consensus 98 ~--~~----~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~ 171 (355)
T 3vu4_A 98 K--VD----APVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGS 171 (355)
T ss_dssp E--CS----SCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTCEEEEECCC---
T ss_pred E--CC----CceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcEEEEEECCCCCc
Confidence 1 11 1233344433 444444443211 0000000 00011 3456788889987654
Q ss_pred ----------------EEEEecCCCCccceEEccCCCEEEEEeCCc--EEEEEeCCCCCCceeeeccC-CCCCCCceeEC
Q 017520 211 ----------------TTLVADGFYFANGVALSRDEDYVVVCESWK--CRKYWLKGERKGKLETFAEN-LPGAPDNINLA 271 (370)
Q Consensus 211 ----------------~~~~~~~~~~p~gi~~~~dg~~l~v~~~~~--l~~~~~~~~~~~~~~~~~~~-~~g~p~~i~~d 271 (370)
...+.........+++++||+.+..+...+ |..||+...+ ....+... ..+....++++
T Consensus 172 ~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~--~~~~~~~g~h~~~v~~~~~s 249 (355)
T 3vu4_A 172 ATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGV--LVREFRRGLDRADVVDMKWS 249 (355)
T ss_dssp ---------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCC--EEEEEECTTCCSCEEEEEEC
T ss_pred cccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCc--EEEEEEcCCCCCcEEEEEEC
Confidence 333333334567899999999777777666 6677765431 12233211 33345568899
Q ss_pred CCCCEEEEEec
Q 017520 272 PDGTFWIAIIK 282 (370)
Q Consensus 272 ~~G~lwv~~~~ 282 (370)
++|++.++...
T Consensus 250 ~~~~~l~s~s~ 260 (355)
T 3vu4_A 250 TDGSKLAVVSD 260 (355)
T ss_dssp TTSCEEEEEET
T ss_pred CCCCEEEEEEC
Confidence 99986666543
No 308
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=97.02 E-value=0.1 Score=52.39 Aligned_cols=102 Identities=11% Similarity=-0.017 Sum_probs=58.9
Q ss_pred cccceEEcCCCc-EEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecCCCCccceEEccCCCEEEEEeCC-
Q 017520 162 FANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESW- 239 (370)
Q Consensus 162 ~~~~l~~d~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~p~gi~~~~dg~~l~v~~~~- 239 (370)
....++++|||+ |.++... .+.....|+.+|.++++............+++|++||+.++++...
T Consensus 126 ~~~~~~~SPDg~~la~~~~~-------------~G~~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~ 192 (710)
T 2xdw_A 126 ALRGYAFSEDGEYFAYGLSA-------------SGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQ 192 (710)
T ss_dssp EEEEEEECTTSSEEEEEEEE-------------TTCSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCC
T ss_pred EEEEEEECCCCCEEEEEEcC-------------CCCceEEEEEEECCCCCCCcccccCcccceEEEEeCCCEEEEEEECC
Confidence 345678999996 4444221 0011137999999988765432111124679999999988887532
Q ss_pred ---------------c-EEEEEeCCCCCCceeeeccC-CCCCCCceeECCCCCE
Q 017520 240 ---------------K-CRKYWLKGERKGKLETFAEN-LPGAPDNINLAPDGTF 276 (370)
Q Consensus 240 ---------------~-l~~~~~~~~~~~~~~~~~~~-~~g~p~~i~~d~~G~l 276 (370)
. |+++++.++.......+... .+....++.+++||+.
T Consensus 193 ~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~ 246 (710)
T 2xdw_A 193 QDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRY 246 (710)
T ss_dssp CSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCE
T ss_pred ccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCE
Confidence 1 88888765432112222211 1222346788999973
No 309
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=97.02 E-value=0.0096 Score=58.35 Aligned_cols=74 Identities=16% Similarity=0.192 Sum_probs=52.7
Q ss_pred ccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecC--CCCccceEEccCCCEEEEE
Q 017520 159 KLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG--FYFANGVALSRDEDYVVVC 236 (370)
Q Consensus 159 ~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~--~~~p~gi~~~~dg~~l~v~ 236 (370)
.+..|..|++|++|+|||...+..-.... .....+..++.+++.++++..++.. -....|+++++|++.||++
T Consensus 474 ~f~~PDNL~fd~~G~LwI~eDg~~~~~~~-----~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 474 MFNSPDGLGFDKAGRLWILTDGDSSNAGD-----FAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CCCCEEEEEECTTCCEEEEECCCCCCSGG-----GTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CccCCcceEECCCCCEEEEecCCCccccc-----ccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 36688999999999999996542111111 1122456789999999988877654 3456799999999988886
Q ss_pred e
Q 017520 237 E 237 (370)
Q Consensus 237 ~ 237 (370)
-
T Consensus 549 i 549 (592)
T 3zwu_A 549 I 549 (592)
T ss_dssp E
T ss_pred E
Confidence 4
No 310
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=96.85 E-value=0.21 Score=43.68 Aligned_cols=220 Identities=10% Similarity=-0.036 Sum_probs=113.1
Q ss_pred CcceEEcCCCcE-EEEecCCeEEEEe--CCeEEE-EEecCCCceeceEEcCCCcEEEEeCCCceEEEc--CCC---eEEE
Q 017520 81 PEDASMDKNGVI-YTATRDGWIKRLQ--DGTWVN-WKFIDSQTLVGLTSTKEGHLIICDNANGLHKVS--EDG---VENF 151 (370)
Q Consensus 81 P~~i~~d~~G~l-~v~~~~g~I~~~~--~g~~~~-~~~~~~~p~~gl~~d~~G~L~v~~~~~gi~~~~--~~g---~~~~ 151 (370)
-.++++.++|+. .+|+.+|.|..++ +++... +........ . +..++.+.++....+..++. ..+ ...+
T Consensus 70 V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~-~--~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~ 146 (318)
T 4ggc_A 70 ISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVG-S--LSWNSYILSSGSRSGHIHHHDVRVAEHHVATL 146 (318)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEE-E--EEEETTEEEEEETTSEEEEEETTSSSCEEEEE
T ss_pred EEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEE-E--eecCCCEEEEEecCCceEeeecCCCceeEEEE
Confidence 357888888864 5667899999999 565433 322223333 3 33455655544444444443 333 2222
Q ss_pred EeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEE-----EEecCCCCccceEE
Q 017520 152 LSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITT-----LVADGFYFANGVAL 226 (370)
Q Consensus 152 ~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~-----~~~~~~~~p~gi~~ 226 (370)
... ...+..+.+.++|+..++.. .++.|..+|..+++.. ...........+++
T Consensus 147 ~~~-----~~~~~~~~~~~~~~~l~s~~-----------------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~ 204 (318)
T 4ggc_A 147 SGH-----SQEVCGLRWAPDGRHLASGG-----------------NDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAW 204 (318)
T ss_dssp ECC-----SSCEEEEEECTTSSEEEEEE-----------------TTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEE
T ss_pred cCc-----cCceEEEEEcCCCCEEEEEe-----------------cCcceeEEECCCCcccccceeeecccCCceEEEEe
Confidence 111 13456778888888766643 3467888887654321 11111223355677
Q ss_pred ccCCCEEEEEeCC---c-EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCCEEEEEecCchhHHHhhhcchhHHHHHH
Q 017520 227 SRDEDYVVVCESW---K-CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLA 302 (370)
Q Consensus 227 ~~dg~~l~v~~~~---~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~ 302 (370)
.+++..++....+ + |..++..... ..... ........+.+.++++..+...+.
T Consensus 205 ~~~~~~~~~~~~~~~~~~i~lwd~~~~~---~~~~~-~~~~~v~~~~~~~~~~~~~~~sg~------------------- 261 (318)
T 4ggc_A 205 CPWQSNVLATGGGTSDRHIRIWNVCSGA---CLSAV-DAHSQVCSILWSPHYKELISGHGF------------------- 261 (318)
T ss_dssp CTTSTTEEEEEECTTTCEEEEEETTTCC---EEEEE-ECSSCEEEEEEETTTTEEEEEECT-------------------
T ss_pred cCCCCcEEEEEecCCCCEEEEEeccccc---ccccc-cceeeeeeeeecccccceEEEEEc-------------------
Confidence 7765444433222 2 6666654321 11111 111223445667777655543321
Q ss_pred hCCccccccccCCCceEEEEEC-CCCcEEEEEeCCCCCccccceeEEEE-CCE-EEEEeCCCCeEEE
Q 017520 303 AYPKLFSQFITLGGGAHLIHVA-EDGTIIRNLVDPTGQLMSFVTSGLQV-DNH-LYVISLTSNFIGK 366 (370)
Q Consensus 303 ~~~~~~~~~~~~~~~g~v~~~~-~~g~~~~~~~~~~g~~~~~~t~~~~~-~g~-L~~gs~~~~~i~~ 366 (370)
..+.|..+| .+++.+..+....+ .++.+... +|+ |.-|+.. ..|.+
T Consensus 262 -------------~d~~i~iwd~~~~~~~~~l~gH~~----~V~~l~~spdg~~l~S~s~D-~~v~i 310 (318)
T 4ggc_A 262 -------------AQNQLVIWKYPTMAKVAELKGHTS----RVLSLTMSPDGATVASAAAD-ETLRL 310 (318)
T ss_dssp -------------TTCCEEEEETTTCCEEEEECCCSS----CEEEEEECTTSSCEEEEETT-TEEEE
T ss_pred -------------CCCEEEEEECCCCcEEEEEcCCCC----CEEEEEEcCCCCEEEEEecC-CeEEE
Confidence 013466667 46888888865443 46666654 344 4444433 33433
No 311
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=96.72 E-value=0.046 Score=51.57 Aligned_cols=148 Identities=7% Similarity=0.031 Sum_probs=84.7
Q ss_pred CCcceEEcCCCcEEE-----EecCCeEEEEe--CC-----e----EEEEE---ecCCCceeceEEcCC-CcEEEE-eCCC
Q 017520 80 HPEDASMDKNGVIYT-----ATRDGWIKRLQ--DG-----T----WVNWK---FIDSQTLVGLTSTKE-GHLIIC-DNAN 138 (370)
Q Consensus 80 ~P~~i~~d~~G~l~v-----~~~~g~I~~~~--~g-----~----~~~~~---~~~~~p~~gl~~d~~-G~L~v~-~~~~ 138 (370)
...+++++++|...+ ++.++.|..|+ ++ + +..+. .....+. +++++++ ++++++ ..++
T Consensus 94 ~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~-~v~~~p~~~~~las~s~Dg 172 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVI-DMKWNPTVPSMVAVCLADG 172 (434)
T ss_dssp CEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEE-EEEECSSCTTEEEEEETTS
T ss_pred cccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceE-EEEECCCCCCEEEEEECCC
Confidence 467899999887555 23678888888 32 1 11121 1234567 8999987 676664 4444
Q ss_pred ceEEEc-CCCeEEEEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecC
Q 017520 139 GLHKVS-EDGVENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG 217 (370)
Q Consensus 139 gi~~~~-~~g~~~~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~ 217 (370)
.|..++ +++...... .+ ....+..++++++|+..++.+ .++.|..||.+......+...
T Consensus 173 ~v~iwD~~~~~~~~~~--~~-~~~~v~~v~wspdg~~lasgs-----------------~dg~v~iwd~~~~~~~~~~~~ 232 (434)
T 2oit_A 173 SIAVLQVTETVKVCAT--LP-STVAVTSVCWSPKGKQLAVGK-----------------QNGTVVQYLPTLQEKKVIPCP 232 (434)
T ss_dssp CEEEEEESSSEEEEEE--EC-GGGCEEEEEECTTSSCEEEEE-----------------TTSCEEEECTTCCEEEEECCC
T ss_pred eEEEEEcCCCcceeec--cC-CCCceeEEEEcCCCCEEEEEc-----------------CCCcEEEEccCCcccccccCC
Confidence 466666 555111111 11 113578899999996544432 347899999873333322211
Q ss_pred CC-------CccceEEccCCCEEEEEeCCc--------EEEEEeCC
Q 017520 218 FY-------FANGVALSRDEDYVVVCESWK--------CRKYWLKG 248 (370)
Q Consensus 218 ~~-------~p~gi~~~~dg~~l~v~~~~~--------l~~~~~~~ 248 (370)
.. ....+++++++.++.....+. +..|++..
T Consensus 233 ~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~ 278 (434)
T 2oit_A 233 PFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPK 278 (434)
T ss_dssp TTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCC
T ss_pred cccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEecc
Confidence 11 235677888776544433221 66777653
No 312
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=96.70 E-value=0.2 Score=45.68 Aligned_cols=137 Identities=13% Similarity=-0.038 Sum_probs=73.0
Q ss_pred CCcEEEE-ecCCeEEEEe--CCeE-EEEEecCC---CceeceEEcCCCcEEEEeCC------------Cc-eEEEc-CCC
Q 017520 89 NGVIYTA-TRDGWIKRLQ--DGTW-VNWKFIDS---QTLVGLTSTKEGHLIICDNA------------NG-LHKVS-EDG 147 (370)
Q Consensus 89 ~G~l~v~-~~~g~I~~~~--~g~~-~~~~~~~~---~p~~gl~~d~~G~L~v~~~~------------~g-i~~~~-~~g 147 (370)
+|.+.++ +.|+.|..|| +|+. .++..... ... .++|.++|.+.+.... .+ +..++ .+|
T Consensus 192 ~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~-~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tg 270 (356)
T 2w18_A 192 MQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVC-HKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTT 270 (356)
T ss_dssp STTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCE-EEEEEETTEEEEEEC------------CCEEEEEEETTTT
T ss_pred CCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeE-EEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCC
Confidence 5566665 5889999999 6764 44432211 233 4589999987654221 12 22233 334
Q ss_pred --eEEEEee-cCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecCC-CCcc-
Q 017520 148 --VENFLSY-VNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGF-YFAN- 222 (370)
Q Consensus 148 --~~~~~~~-~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~-~~p~- 222 (370)
+..+.-. ..|... ..+..+.+|.+.++-+ .++.|..+|..+++......+. ..+.
T Consensus 271 k~l~v~~~~~p~Gh~~---~~lsg~~sg~~lASgS-----------------~DgTIkIWDl~tGk~l~tL~gH~~~vvs 330 (356)
T 2w18_A 271 LSVGVMLYCLPPGQAG---RFLEGDVKDHCAAAIL-----------------TSGTIAIWDLLLGQCTALLPPVSDQHWS 330 (356)
T ss_dssp EEEEEEEECCCTTCCC---CEEEEEEETTEEEEEE-----------------TTSCEEEEETTTCSEEEEECCC--CCCC
T ss_pred EEEEEEEeeccCCCcc---eeEccccCCCEEEEEc-----------------CCCcEEEEECCCCcEEEEecCCCCCeEE
Confidence 2211100 011100 0111222233333322 4578999999988765544432 2334
Q ss_pred ceEEccCCCEEEEEeCCc-EEEEEe
Q 017520 223 GVALSRDEDYVVVCESWK-CRKYWL 246 (370)
Q Consensus 223 gi~~~~dg~~l~v~~~~~-l~~~~~ 246 (370)
.++|+|||+.|+-+..++ |..|++
T Consensus 331 ~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 331 FVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EEEECSSSSEEEEECTTSCEEEEEE
T ss_pred EEEECCCCCEEEEEECCCcEEEecC
Confidence 479999999777666666 777764
No 313
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=96.58 E-value=0.42 Score=43.53 Aligned_cols=174 Identities=10% Similarity=-0.029 Sum_probs=82.7
Q ss_pred CCeEEEEe---CCeEE-EEEecCCCceeceEEcC---CCcEEEEeCCCceEEE-c-CCC--eEEEEeecCCcccccccce
Q 017520 98 DGWIKRLQ---DGTWV-NWKFIDSQTLVGLTSTK---EGHLIICDNANGLHKV-S-EDG--VENFLSYVNGSKLRFANDV 166 (370)
Q Consensus 98 ~g~I~~~~---~g~~~-~~~~~~~~p~~gl~~d~---~G~L~v~~~~~gi~~~-~-~~g--~~~~~~~~~g~~~~~~~~l 166 (370)
++.|..++ +|+.. .......... .++|.+ ++.++++....+..++ + ++| ++.+... ......+..+
T Consensus 156 d~~V~~~~~s~dG~~~~s~~~~~~~v~-~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~--~~~v~~v~~v 232 (356)
T 2w18_A 156 DQQVEVMTFAEDGGGKENQFLMPPEET-ILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHID--DSYQASVCHK 232 (356)
T ss_dssp TCEEEEEEECTTSCEEEEEEECCCSSC-EEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECC--C---CCCEEE
T ss_pred CCcEEEEEECCCCceeeeeccCCCcee-eEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCC--CcceeeeEEE
Confidence 55566665 45432 2222222223 445554 7788887656565555 5 667 4555321 1112356677
Q ss_pred EEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEec-CC---CCccceEEccCCCEEEEEeCCc-E
Q 017520 167 VEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD-GF---YFANGVALSRDEDYVVVCESWK-C 241 (370)
Q Consensus 167 ~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~-~~---~~p~gi~~~~dg~~l~v~~~~~-l 241 (370)
++.|+|.+.++.+.... ...+......+.+..+|+++++...... .+ ....-+..+.++..+..+..++ |
T Consensus 233 afSpdG~~lvs~s~~~~-----~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS~DgTI 307 (356)
T 2w18_A 233 AYSEMGLLFIVLSHPCA-----KESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVKDHCAAAILTSGTI 307 (356)
T ss_dssp EEEETTEEEEEEC-----------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEETTEEEEEETTSCE
T ss_pred EECCCCCEEEEeccCCC-----cceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccCCCEEEEEcCCCcE
Confidence 89999987765332000 0112233456778888998876532210 00 0001122233344333334455 8
Q ss_pred EEEEeCCCCCCceeeeccCCCCCCCceeECCCCCEEEEEe
Q 017520 242 RKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAII 281 (370)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~ 281 (370)
..+|+...+. ...+.......-..+++++||.+.++..
T Consensus 308 kIWDl~tGk~--l~tL~gH~~~vvs~vafSPDG~~LaSGS 345 (356)
T 2w18_A 308 AIWDLLLGQC--TALLPPVSDQHWSFVKWSGTDSHLLAGQ 345 (356)
T ss_dssp EEEETTTCSE--EEEECCC--CCCCEEEECSSSSEEEEEC
T ss_pred EEEECCCCcE--EEEecCCCCCeEEEEEECCCCCEEEEEE
Confidence 8899865421 2222211111122378999998666543
No 314
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=96.57 E-value=0.021 Score=55.99 Aligned_cols=100 Identities=20% Similarity=0.315 Sum_probs=66.6
Q ss_pred CCCcCCCcceEEcC-CCcEEEEec----------------------CCeEEEEe-C-C-------eEEEEEec-------
Q 017520 75 EGSVNHPEDASMDK-NGVIYTATR----------------------DGWIKRLQ-D-G-------TWVNWKFI------- 115 (370)
Q Consensus 75 ~~~~~~P~~i~~d~-~G~l~v~~~----------------------~g~I~~~~-~-g-------~~~~~~~~------- 115 (370)
...+..||++.+++ +|.+|++.. .|+|+++. + + ++..+...
T Consensus 380 AT~f~RpEgi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~v~~g~p~~~~ 459 (592)
T 3zwu_A 380 ATRMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHA 459 (592)
T ss_dssp CCCEECEEEEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTST
T ss_pred eEEEeccceeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccceeEEEEEEeccCccccc
Confidence 34578999999996 899999852 37899997 1 1 22333210
Q ss_pred ---------------CCCceeceEEcCCCcEEEEeCCC-------------ceEEEc-CCC-eEEEEeecCCcccccccc
Q 017520 116 ---------------DSQTLVGLTSTKEGHLIICDNAN-------------GLHKVS-EDG-VENFLSYVNGSKLRFAND 165 (370)
Q Consensus 116 ---------------~~~p~~gl~~d~~G~L~v~~~~~-------------gi~~~~-~~g-~~~~~~~~~g~~~~~~~~ 165 (370)
...|- .|++|++|+|||++-.. .++.++ .+| ++.+.....+ ..+.+
T Consensus 460 ~~~~~~~~~~~~~~~f~~PD-NL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~g---aE~TG 535 (592)
T 3zwu_A 460 GTPKGGSSNITPQNMFNSPD-GLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIG---CEVTG 535 (592)
T ss_dssp TSGGGCCTTCCTTTCCCCEE-EEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTT---CEEEE
T ss_pred ccccccccccCCCCCccCCc-ceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCC---ccCcC
Confidence 12467 89999999999996431 255666 456 6666544333 34667
Q ss_pred eEEcCCC-cEEEEe
Q 017520 166 VVEASDG-SLYFTV 178 (370)
Q Consensus 166 l~~d~~G-~l~v~d 178 (370)
++++||| +||+.-
T Consensus 536 ~~fspDg~tlfvni 549 (592)
T 3zwu_A 536 ISFSPDQKTLFVGI 549 (592)
T ss_dssp EEECTTSSEEEEEE
T ss_pred eeECCCCCEEEEEE
Confidence 8999998 477663
No 315
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=96.46 E-value=0.5 Score=47.25 Aligned_cols=103 Identities=12% Similarity=0.041 Sum_probs=58.0
Q ss_pred cccceEEcCCCc-E-EEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEe-cCCCCccceEEccCCCEEEEEeC
Q 017520 162 FANDVVEASDGS-L-YFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-DGFYFANGVALSRDEDYVVVCES 238 (370)
Q Consensus 162 ~~~~l~~d~~G~-l-~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~-~~~~~p~gi~~~~dg~~l~v~~~ 238 (370)
.+.+++++|||+ | |..+.+ +.....|+.+|.++++..... ... ...+++|+ ||+.++++..
T Consensus 130 ~l~~~~~SpDg~~lAy~~~~~--------------G~~~~~i~v~dl~tg~~~~~~~~~~-k~~~~~Ws-Dg~~l~y~~~ 193 (693)
T 3iuj_A 130 ALDQLSFSRDGRILAYSLSLA--------------GSDWREIHLMDVESKQPLETPLKDV-KFSGISWL-GNEGFFYSSY 193 (693)
T ss_dssp EEEEEEECTTSSEEEEEEECS--------------SCCEEEEEEEETTTCSEEEEEEEEE-ESCCCEEE-TTTEEEEEES
T ss_pred EEEEEEECCCCCEEEEEEecC--------------CCceEEEEEEECCCCCCCccccCCc-eeccEEEe-CCCEEEEEEe
Confidence 456678999996 3 333322 012247899999988754321 111 13578899 9998888754
Q ss_pred C----------c----EEEEEeCCCCCCceeeeccCC--CCCCCceeECCCCC-EEEEE
Q 017520 239 W----------K----CRKYWLKGERKGKLETFAENL--PGAPDNINLAPDGT-FWIAI 280 (370)
Q Consensus 239 ~----------~----l~~~~~~~~~~~~~~~~~~~~--~g~p~~i~~d~~G~-lwv~~ 280 (370)
. + |+++++.++.......+.... +..-.++.+++||+ +.+..
T Consensus 194 ~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~ 252 (693)
T 3iuj_A 194 DKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISA 252 (693)
T ss_dssp SCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEE
T ss_pred cCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEE
Confidence 3 1 888887654222222322111 11122467899997 44443
No 316
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=96.31 E-value=0.49 Score=41.27 Aligned_cols=142 Identities=10% Similarity=0.011 Sum_probs=83.8
Q ss_pred cceEEcCCCcEEEEecCCeEEEEe--CCeEEEEEe---cCCCceeceEEcCCCcEEEEeCCCc-eEEEc-CCC--eEEEE
Q 017520 82 EDASMDKNGVIYTATRDGWIKRLQ--DGTWVNWKF---IDSQTLVGLTSTKEGHLIICDNANG-LHKVS-EDG--VENFL 152 (370)
Q Consensus 82 ~~i~~d~~G~l~v~~~~g~I~~~~--~g~~~~~~~---~~~~p~~gl~~d~~G~L~v~~~~~g-i~~~~-~~g--~~~~~ 152 (370)
..|+..+++.|-+| .++.|..|+ +|+...... ...... ++++.++|+.+++....| |..++ +++ +..+.
T Consensus 29 ~~l~WS~~~~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~-~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~ 106 (318)
T 4ggc_A 29 NLVDWSSGNVLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYIS-SVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMT 106 (318)
T ss_dssp BCEEECTTSEEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEE-EEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred eEEEECCCCEEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEE-EEEECCCCCEEEEEECCCcEEEeecCCceeEEEec
Confidence 45778777755555 488999999 676544332 223456 899999998766544445 55555 566 33321
Q ss_pred eecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCe--EEEEecCCCCccceEEccCC
Q 017520 153 SYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNI--TTLVADGFYFANGVALSRDE 230 (370)
Q Consensus 153 ~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~--~~~~~~~~~~p~gi~~~~dg 230 (370)
+. ......+..++.+.++.+ ..+.+..++..++. ...+.........+++++++
T Consensus 107 ----~h---~~~~~~~~~~~~~l~s~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (318)
T 4ggc_A 107 ----SH---SARVGSLSWNSYILSSGS-----------------RSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDG 162 (318)
T ss_dssp ----CC---SSCEEEEEEETTEEEEEE-----------------TTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTS
T ss_pred ----Cc---cceEEEeecCCCEEEEEe-----------------cCCceEeeecCCCceeEEEEcCccCceEEEEEcCCC
Confidence 11 111223444555555432 23455555554332 22333334456678889999
Q ss_pred CEEEEEeCCc-EEEEEeCCC
Q 017520 231 DYVVVCESWK-CRKYWLKGE 249 (370)
Q Consensus 231 ~~l~v~~~~~-l~~~~~~~~ 249 (370)
+.++.+...+ |..||+...
T Consensus 163 ~~l~s~~~d~~i~iwd~~~~ 182 (318)
T 4ggc_A 163 RHLASGGNDNLVNVWPSAPG 182 (318)
T ss_dssp SEEEEEETTSCEEEEESSCB
T ss_pred CEEEEEecCcceeEEECCCC
Confidence 9777777777 888887643
No 317
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.29 E-value=0.13 Score=46.81 Aligned_cols=108 Identities=7% Similarity=0.094 Sum_probs=61.4
Q ss_pred CCcEEEEecCCeEEEEe--CCeEEEEEecC--CCceeceE---EcCCCcEEEEe--CCCceEEEc-CCCeEEEEeecCCc
Q 017520 89 NGVIYTATRDGWIKRLQ--DGTWVNWKFID--SQTLVGLT---STKEGHLIICD--NANGLHKVS-EDGVENFLSYVNGS 158 (370)
Q Consensus 89 ~G~l~v~~~~g~I~~~~--~g~~~~~~~~~--~~p~~gl~---~d~~G~L~v~~--~~~gi~~~~-~~g~~~~~~~~~g~ 158 (370)
+|.+|+++.+|.|+.++ +|+...-.... ..+. +.. ...+|.+|+.. ..+.|+.++ .+|........+..
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~-~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~l 88 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLI-EIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQL 88 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSE-ECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHH
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcE-EecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccc
Confidence 57899999999999999 78766544333 1122 211 01245677765 345688888 56622221111111
Q ss_pred ccccc----cceEE------cCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEe
Q 017520 159 KLRFA----NDVVE------ASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA 215 (370)
Q Consensus 159 ~~~~~----~~l~~------d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~ 215 (370)
-..+| ...++ +.+|.+|++.. +++++.+|..+|+.....
T Consensus 89 v~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~------------------~g~l~ald~~tG~~~W~~ 137 (339)
T 2be1_A 89 VSTSPLHLKTNIVVNDSGKIVEDEKVYTGSM------------------RTIMYTINMLNGEIISAF 137 (339)
T ss_dssp HTTCSEEEECC----------CCEEEEECEE------------------EEEEEEEETTTCCEEEEE
T ss_pred eeccccccCCCceeecccccccCCEEEEEec------------------CCEEEEEECCCCcEEEEE
Confidence 00111 11122 25778888854 478999999988776443
No 318
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=96.08 E-value=0.013 Score=56.76 Aligned_cols=58 Identities=16% Similarity=0.261 Sum_probs=46.2
Q ss_pred CcCCCcceEEcCCCcEEEEe-c------------CCeEEEEe--CCeEEEEEec--CCCceeceEEcCCCc-EEEEe
Q 017520 77 SVNHPEDASMDKNGVIYTAT-R------------DGWIKRLQ--DGTWVNWKFI--DSQTLVGLTSTKEGH-LIICD 135 (370)
Q Consensus 77 ~~~~P~~i~~d~~G~l~v~~-~------------~g~I~~~~--~g~~~~~~~~--~~~p~~gl~~d~~G~-L~v~~ 135 (370)
.|.+|..|++|++|.||+++ . +..|++++ +|+++.+... ..+|. |+++++|++ |||+-
T Consensus 474 ~fnsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpn-GiafSPD~ktLfV~v 549 (592)
T 4a9v_A 474 MFNSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVT-GISFSPDQKTLFVGI 549 (592)
T ss_dssp CCCCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEE-EEEECTTSSEEEEEE
T ss_pred ccCCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCcccc-CCEECCCCCEEEEEE
Confidence 47899999999999999954 2 22799998 6888887653 34688 999999995 78864
No 319
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=95.92 E-value=1.8 Score=44.14 Aligned_cols=145 Identities=9% Similarity=0.030 Sum_probs=82.8
Q ss_pred CCcceEEcC--CCcEEEEecCCeEEEEe-CC-eEEEEEecC-------CCceeceEEcCC--CcEEEEeCC------Cce
Q 017520 80 HPEDASMDK--NGVIYTATRDGWIKRLQ-DG-TWVNWKFID-------SQTLVGLTSTKE--GHLIICDNA------NGL 140 (370)
Q Consensus 80 ~P~~i~~d~--~G~l~v~~~~g~I~~~~-~g-~~~~~~~~~-------~~p~~gl~~d~~--G~L~v~~~~------~gi 140 (370)
...+|++++ .+.+|+++..|.|++-+ .| .++...... .... +|++++. +.+|++... .+|
T Consensus 16 ~i~~i~~~p~~~~~~~a~~~~ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~-~ia~dp~~~~~i~~~~g~~~~~~~~~v 94 (789)
T 1sqj_A 16 YITGIVAHPKTKDLLYARTDIGGAYRWDAGTSKWIPLNDFIEAQDMNIMGTE-SIALDPNNPDRLYLAQGRYVGDEWAAF 94 (789)
T ss_dssp CEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCCGGGGGGCSEE-EEEEETTEEEEEEEEECSCTTSSCCEE
T ss_pred cEEEEEECCCCCCEEEEEecCCCEEEecCCCCCeeECccCCCcccccCCcee-EEEECCCCCCEEEEEeCccCCCcccEE
Confidence 566788886 47899999888899998 44 465543311 1245 7888864 468997643 456
Q ss_pred EEEcCCC--eEEEEeecC--C-ccc-ccccceEEcCC--CcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEE
Q 017520 141 HKVSEDG--VENFLSYVN--G-SKL-RFANDVVEASD--GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITT 212 (370)
Q Consensus 141 ~~~~~~g--~~~~~~~~~--g-~~~-~~~~~l~~d~~--G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~ 212 (370)
++-...| ++.+..... + .+. ..+..|++++. +.+|+... .+.|++-+-....++
T Consensus 95 ~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~------------------~~gl~~S~DgG~TW~ 156 (789)
T 1sqj_A 95 YVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTR------------------TEGIWKSSDRAKTWT 156 (789)
T ss_dssp EEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECS------------------SSCEEEESSTTSSCE
T ss_pred EEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEec------------------cCCEEEECCCCcccC
Confidence 6665555 555432111 0 000 13456888874 47888742 245776554334444
Q ss_pred EEecCC------CCccceEEcc-CCCEEEEEeCC-c-EEE
Q 017520 213 LVADGF------YFANGVALSR-DEDYVVVCESW-K-CRK 243 (370)
Q Consensus 213 ~~~~~~------~~p~gi~~~~-dg~~l~v~~~~-~-l~~ 243 (370)
.+.... .....+++++ +++.+|++... . |++
T Consensus 157 ~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~v~~ 196 (789)
T 1sqj_A 157 NVTSIPDAFTNGIGYTSVIFDPERNGTIYASATAPQGMYV 196 (789)
T ss_dssp EETTSCCCCSTTTCEEEEEECTTSTTCEEEEESSTTCEEE
T ss_pred CCccCccccCCCCCeEEEEECCCCCCEEEEEEcCCCeEEE
Confidence 433210 1123466676 44568888764 4 554
No 320
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=95.88 E-value=0.6 Score=42.87 Aligned_cols=66 Identities=8% Similarity=0.034 Sum_probs=40.2
Q ss_pred CcceEEcC--------CCcEEE-EecCCeEEEEe--CCe-EEEEEecCCCceeceEEcCCCc-EEE-EeCCCceEEEc-C
Q 017520 81 PEDASMDK--------NGVIYT-ATRDGWIKRLQ--DGT-WVNWKFIDSQTLVGLTSTKEGH-LII-CDNANGLHKVS-E 145 (370)
Q Consensus 81 P~~i~~d~--------~G~l~v-~~~~g~I~~~~--~g~-~~~~~~~~~~p~~gl~~d~~G~-L~v-~~~~~gi~~~~-~ 145 (370)
-.+|++.+ ||++.+ +..|+.|..|+ ++. ..........+. ++++.|++. +++ +..++-|..++ .
T Consensus 139 v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~-~v~~~p~~~~~l~~~~~d~~v~~wd~~ 217 (393)
T 4gq1_A 139 VNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGI-SVQFRPSNPNQLIVGERNGNIRIFDWT 217 (393)
T ss_dssp EEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEE-EEEEETTEEEEEEEEETTSEEEEEETT
T ss_pred eEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcE-EEEECCCCCceEEecCCCCEEEEEECC
Confidence 45677754 565554 45889999998 443 444444455567 899998874 444 44333455555 4
Q ss_pred CC
Q 017520 146 DG 147 (370)
Q Consensus 146 ~g 147 (370)
++
T Consensus 218 t~ 219 (393)
T 4gq1_A 218 LN 219 (393)
T ss_dssp CC
T ss_pred CC
Confidence 44
No 321
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=95.87 E-value=1.6 Score=43.42 Aligned_cols=175 Identities=13% Similarity=0.059 Sum_probs=90.8
Q ss_pred cceEEcCCCc-EEEEecCCe-------------EEEEe--CCe---EEEEEecC--CCceeceEEcCCCc-EEEEeCCC-
Q 017520 82 EDASMDKNGV-IYTATRDGW-------------IKRLQ--DGT---WVNWKFID--SQTLVGLTSTKEGH-LIICDNAN- 138 (370)
Q Consensus 82 ~~i~~d~~G~-l~v~~~~g~-------------I~~~~--~g~---~~~~~~~~--~~p~~gl~~d~~G~-L~v~~~~~- 138 (370)
.++++.+||. |+.++.+.. |++++ ++. ...+.... .... ++.+++||+ |.++....
T Consensus 171 ~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~-~~~~SpDG~~l~~~~~~~~ 249 (695)
T 2bkl_A 171 ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFL-QSDLSRDGKYLFVYILRGW 249 (695)
T ss_dssp CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEE-EEEECTTSCCEEEEEEETT
T ss_pred cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEE-EEEECCCCCEEEEEEeCCC
Confidence 5678888886 455544333 99988 343 22222221 2345 788999996 54443223
Q ss_pred ---ceEEEc-CCC-eEEEEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCe---
Q 017520 139 ---GLHKVS-EDG-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNI--- 210 (370)
Q Consensus 139 ---gi~~~~-~~g-~~~~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~--- 210 (370)
.|+.++ +++ .+.+..... ....... ++|.+|+.... ....+.|+++|.+++.
T Consensus 250 ~~~~l~~~~~~~~~~~~l~~~~~-----~~~~~~~-~~g~l~~~s~~--------------~~~~~~l~~~d~~~~~~~~ 309 (695)
T 2bkl_A 250 SENDVYWKRPGEKDFRLLVKGVG-----AKYEVHA-WKDRFYVLTDE--------------GAPRQRVFEVDPAKPARAS 309 (695)
T ss_dssp TEEEEEEECTTCSSCEEEEECSS-----CCEEEEE-ETTEEEEEECT--------------TCTTCEEEEEBTTBCSGGG
T ss_pred CceEEEEEcCCCCceEEeecCCC-----ceEEEEe-cCCcEEEEECC--------------CCCCCEEEEEeCCCCCccC
Confidence 577777 456 665543321 1122233 55557776431 1245789999987665
Q ss_pred EEEEecC--CCCccceEEccCCCEEEEEeC-Cc---EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCC-EEEEEec
Q 017520 211 TTLVADG--FYFANGVALSRDEDYVVVCES-WK---CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGT-FWIAIIK 282 (370)
Q Consensus 211 ~~~~~~~--~~~p~gi~~~~dg~~l~v~~~-~~---l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~-lwv~~~~ 282 (370)
++.+... .....+++++ ++ .++++.. .+ |+.+++++. ..+.+.....+....+..+++|. ++++...
T Consensus 310 ~~~l~~~~~~~~l~~~~~~-~~-~lv~~~~~dg~~~l~~~~~~g~---~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss 383 (695)
T 2bkl_A 310 WKEIVPEDSSASLLSVSIV-GG-HLSLEYLKDATSEVRVATLKGK---PVRTVQLPGVGAASNLMGLEDLDDAYYVFTS 383 (695)
T ss_dssp CEEEECCCSSCEEEEEEEE-TT-EEEEEEEETTEEEEEEEETTCC---EEEECCCSSSSEECCCBSCTTCSEEEEEEEE
T ss_pred CeEEecCCCCCeEEEEEEE-CC-EEEEEEEECCEEEEEEEeCCCC---eeEEecCCCCeEEEEeecCCCCCEEEEEEcC
Confidence 2444332 1223556776 44 4666554 33 677775542 12222101112233455666774 5555433
No 322
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=95.55 E-value=2.3 Score=42.85 Aligned_cols=98 Identities=12% Similarity=0.185 Sum_probs=60.8
Q ss_pred CCcceEEcCC--CcEEEEecCCeEEEEe-CC-eEEEEEecC-------CCceeceEEcC--CCcEEEEeC---------C
Q 017520 80 HPEDASMDKN--GVIYTATRDGWIKRLQ-DG-TWVNWKFID-------SQTLVGLTSTK--EGHLIICDN---------A 137 (370)
Q Consensus 80 ~P~~i~~d~~--G~l~v~~~~g~I~~~~-~g-~~~~~~~~~-------~~p~~gl~~d~--~G~L~v~~~---------~ 137 (370)
...+|+++++ +.+|+++..|+|+|.+ .| +++.+.... .... +|++|+ .+.+|++.. .
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~-~i~~dp~~~~~v~v~~~~~~~~~~~~~ 102 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWDPSTETWIPLLDHFQMDEYSYYGVE-SIATDPVDPNRVYIVAGMYTNDWLPNM 102 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEETTTTEEEECCTTCCGGGGGGGCEE-EEEECSSSTTCEEEEECSCSSSSSCCC
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeCCCCCCEEECcCccCcccccCCCcc-eEEeCCCCCCEEEEEecccccccccCC
Confidence 5668999864 7899999778899998 44 466543321 1234 789986 357999863 1
Q ss_pred CceEEEcCCC--eEEEEeecC-Cc--c-cccccceEEcCC--CcEEEEe
Q 017520 138 NGLHKVSEDG--VENFLSYVN-GS--K-LRFANDVVEASD--GSLYFTV 178 (370)
Q Consensus 138 ~gi~~~~~~g--~~~~~~~~~-g~--~-~~~~~~l~~d~~--G~l~v~d 178 (370)
.+|++-...| ++.+..... +. + ......|+++|. +.+|++.
T Consensus 103 ~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~ 151 (737)
T 2cn3_A 103 GAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGT 151 (737)
T ss_dssp CEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEEC
T ss_pred ccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEee
Confidence 3566666555 555432211 10 0 012367999874 5788875
No 323
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=95.39 E-value=0.4 Score=48.37 Aligned_cols=145 Identities=12% Similarity=0.092 Sum_probs=81.6
Q ss_pred ceEEcCCCc-EEEEecC-----CeEEEEe--CC--e-EEEEEecCCCceeceEEcCCC-cEEEEeCC----CceEEEc-C
Q 017520 83 DASMDKNGV-IYTATRD-----GWIKRLQ--DG--T-WVNWKFIDSQTLVGLTSTKEG-HLIICDNA----NGLHKVS-E 145 (370)
Q Consensus 83 ~i~~d~~G~-l~v~~~~-----g~I~~~~--~g--~-~~~~~~~~~~p~~gl~~d~~G-~L~v~~~~----~gi~~~~-~ 145 (370)
++.+++||+ |.+...+ ..|+.++ ++ + ++.+........ ... +++| .||+.... ..|+.++ .
T Consensus 272 ~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~-~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~ 349 (741)
T 1yr2_A 272 GASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQW-DFV-DGVGDQLWFVSGDGAPLKKIVRVDLS 349 (741)
T ss_dssp EEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCE-EEE-EEETTEEEEEECTTCTTCEEEEEECS
T ss_pred EEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceE-EEE-eccCCEEEEEECCCCCCCEEEEEeCC
Confidence 567788885 5555432 3788888 55 4 555544333233 333 3566 46666432 2388888 4
Q ss_pred C--C-eEEEEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEec-CCCCc
Q 017520 146 D--G-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD-GFYFA 221 (370)
Q Consensus 146 ~--g-~~~~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~-~~~~p 221 (370)
+ + .+.+..... ..+.++.++ ++.++++... .....|+.++.+++..+.+.. .....
T Consensus 350 ~~~~~~~~l~~~~~----~~l~~~~~~-~~~lv~~~~~---------------dg~~~l~~~~~~g~~~~~l~~~~~~~v 409 (741)
T 1yr2_A 350 GSTPRFDTVVPESK----DNLESVGIA-GNRLFASYIH---------------DAKSQVLAFDLDGKPAGAVSLPGIGSA 409 (741)
T ss_dssp SSSCEEEEEECCCS----SEEEEEEEE-BTEEEEEEEE---------------TTEEEEEEEETTSCEEEECBCSSSCEE
T ss_pred CCccccEEEecCCC----CeEEEEEEE-CCEEEEEEEE---------------CCEEEEEEEeCCCCceeeccCCCCeEE
Confidence 4 3 444433211 124456665 5677776431 133578888876554444321 23334
Q ss_pred cceEEccCCCEEEEEeCC--c---EEEEEeCCC
Q 017520 222 NGVALSRDEDYVVVCESW--K---CRKYWLKGE 249 (370)
Q Consensus 222 ~gi~~~~dg~~l~v~~~~--~---l~~~~~~~~ 249 (370)
.++.+++|++.++++-+. . |+.||+.+.
T Consensus 410 ~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg 442 (741)
T 1yr2_A 410 SGLSGRPGDRHAYLSFSSFTQPATVLALDPATA 442 (741)
T ss_dssp EEEECCBTCSCEEEEEEETTEEEEEEEEETTTT
T ss_pred EEeecCCCCCEEEEEEcCCCCCCEEEEEECCCC
Confidence 567788888766655432 2 899997653
No 324
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=95.35 E-value=0.013 Score=54.08 Aligned_cols=101 Identities=17% Similarity=0.130 Sum_probs=45.7
Q ss_pred eEEcCCCcEEEEeCCCceEEEc-CCC-eEEEEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCce
Q 017520 123 LTSTKEGHLIICDNANGLHKVS-EDG-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQ 200 (370)
Q Consensus 123 l~~d~~G~L~v~~~~~gi~~~~-~~g-~~~~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~ 200 (370)
.+++ ++.+|+++..+.++.++ .+| ...-... +. +....+..+|.+|++.+ .++.
T Consensus 5 P~v~-~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~----~~s~p~~~~g~~~v~~s-----------------~dg~ 60 (369)
T 2hz6_A 5 VTLP-ETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DP----VLQVPTHVEEPAFLPDP-----------------NDGS 60 (369)
T ss_dssp ---C-TTEEEEEETTSEEEEEETTTCCEEEEEEC--CC----SCCCC-----CCEEECT-----------------TTCC
T ss_pred Ceee-CCEEEEEcCCCEEEEEECCCCCEEEEecC--CC----ceecceEcCCCEEEEeC-----------------CCCE
Confidence 3453 67899998777899999 788 4332222 21 11222234577777743 3478
Q ss_pred EEEEeCCCCeEEEEecCCCCcc----ceEEccCCCEEEEEeCCc-EEEEEeCCC
Q 017520 201 LLKYDPSSNITTLVADGFYFAN----GVALSRDEDYVVVCESWK-CRKYWLKGE 249 (370)
Q Consensus 201 l~~~d~~t~~~~~~~~~~~~p~----gi~~~~dg~~l~v~~~~~-l~~~~~~~~ 249 (370)
|+.+|.++++...... ...+. ..+++.++ .+|++...+ |+.+|.+++
T Consensus 61 l~a~d~~tG~~~w~~~-~~~~~~~~~sp~~~~~~-~v~~g~~dg~v~a~D~~tG 112 (369)
T 2hz6_A 61 LYTLGSKNNEGLTKLP-FTIPELVQASPCRSSDG-ILYMGKKQDIWYVIDLLTG 112 (369)
T ss_dssp EEEC-----CCSEECS-CCHHHHHTTCSCC------CCCCEEEEEEEEECCC--
T ss_pred EEEEECCCCceeeeee-ccCccccccCceEecCC-EEEEEeCCCEEEEEECCCC
Confidence 9999987665422111 11111 11222233 477766555 888987643
No 325
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=94.39 E-value=1.5 Score=43.41 Aligned_cols=120 Identities=13% Similarity=0.103 Sum_probs=62.2
Q ss_pred eEEcCCCcEEEEe--cCCeEEEEe--CCeEEEEEecC-CC-ceeceEEcCCCcEEEEeCC-------CceEEEc-CCC-e
Q 017520 84 ASMDKNGVIYTAT--RDGWIKRLQ--DGTWVNWKFID-SQ-TLVGLTSTKEGHLIICDNA-------NGLHKVS-EDG-V 148 (370)
Q Consensus 84 i~~d~~G~l~v~~--~~g~I~~~~--~g~~~~~~~~~-~~-p~~gl~~d~~G~L~v~~~~-------~gi~~~~-~~g-~ 148 (370)
+++..+|.||+.- ....++++| +++++...... .+ -+ +.++-++|+|||.... ..+.++| .++ +
T Consensus 248 ~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~-s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W 326 (656)
T 1k3i_A 248 ISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQ-SSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTW 326 (656)
T ss_dssp EEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSC-EEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEE
T ss_pred ccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCcccccc-ceEEecCCeEEEEeCcccCCcccccceEeCCCCCcc
Confidence 5666789999865 344799999 66666543211 12 13 4556568999997541 2367788 455 5
Q ss_pred EEEEeecCCcccccc-cceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEE
Q 017520 149 ENFLSYVNGSKLRFA-NDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTL 213 (370)
Q Consensus 149 ~~~~~~~~g~~~~~~-~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~ 213 (370)
+.+... ...++... +..++..++++|+-.... ..++.......+.+||++++....
T Consensus 327 ~~~~~~-~~~p~~~~~~~~~~~~~~~iyv~Gg~~--------g~~~~~~~~~~v~~yd~~~~~w~~ 383 (656)
T 1k3i_A 327 TSLPNA-KVNPMLTADKQGLYRSDNHAWLFGWKK--------GSVFQAGPSTAMNWYYTSGSGDVK 383 (656)
T ss_dssp EEETTS-CSGGGCCCCTTGGGTTTCSCCEEECGG--------GCEEECCSSSEEEEEECSTTCEEE
T ss_pred eeCCCc-cccccccccccceeecCCceEEEECCC--------CcEEEecCccceeeeecCCcceee
Confidence 554210 00111110 011222456666553210 001111234578999998776543
No 326
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=94.16 E-value=3.3 Score=37.78 Aligned_cols=134 Identities=8% Similarity=-0.005 Sum_probs=73.4
Q ss_pred EEEEecCCeEEEEe--CCeEEEEEe------cCCCceeceEEcC--------CCcEEEEeCCCceEEE-c-CCC--eEEE
Q 017520 92 IYTATRDGWIKRLQ--DGTWVNWKF------IDSQTLVGLTSTK--------EGHLIICDNANGLHKV-S-EDG--VENF 151 (370)
Q Consensus 92 l~v~~~~g~I~~~~--~g~~~~~~~------~~~~p~~gl~~d~--------~G~L~v~~~~~gi~~~-~-~~g--~~~~ 151 (370)
|..+..|+.|..++ .+....... ..+... ++++.+ ||++++.....+.+++ + .++ ...+
T Consensus 104 las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~-~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~ 182 (393)
T 4gq1_A 104 LACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVN-DIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAG 182 (393)
T ss_dssp EEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEE-EEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEE
T ss_pred EEEEeCCCcEEEEECCCCccceeeeecccCCCCCceE-EEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeee
Confidence 33455788888888 554332211 223456 888875 7888776555554444 4 444 3322
Q ss_pred EeecCCcccccccceEEcCCCc-EEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEec--------------
Q 017520 152 LSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD-------------- 216 (370)
Q Consensus 152 ~~~~~g~~~~~~~~l~~d~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~-------------- 216 (370)
... . ..+..+++.|++. +.++.+ .++.|..||..+++......
T Consensus 183 ~~~-~----~~v~~v~~~p~~~~~l~~~~-----------------~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~ 240 (393)
T 4gq1_A 183 YPL-S----SPGISVQFRPSNPNQLIVGE-----------------RNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLN 240 (393)
T ss_dssp EEC-S----SCEEEEEEETTEEEEEEEEE-----------------TTSEEEEEETTCCC----------CSCCCSEEEE
T ss_pred cCC-C----CCcEEEEECCCCCceEEecC-----------------CCCEEEEEECCCCcccccccccCCcccceEEecc
Confidence 221 1 2456789998874 444432 34677778876554321100
Q ss_pred ------------CCCCccceEEc-cCCCEEEEEeCCc-EEEEEeCC
Q 017520 217 ------------GFYFANGVALS-RDEDYVVVCESWK-CRKYWLKG 248 (370)
Q Consensus 217 ------------~~~~p~gi~~~-~dg~~l~v~~~~~-l~~~~~~~ 248 (370)
.......+.++ +|++.++.+..++ +..|++..
T Consensus 241 ~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~ 286 (393)
T 4gq1_A 241 TLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFA 286 (393)
T ss_dssp SGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC--
T ss_pred cccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECcc
Confidence 01122345665 7888777766666 88888754
No 327
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=93.43 E-value=7.3 Score=39.34 Aligned_cols=140 Identities=13% Similarity=0.082 Sum_probs=79.0
Q ss_pred CCcceEEcCC--CcEEEEecCCeEEEEe-CC-eEEEEEecC------------CCceeceEEcC--CCcEEEEeC-----
Q 017520 80 HPEDASMDKN--GVIYTATRDGWIKRLQ-DG-TWVNWKFID------------SQTLVGLTSTK--EGHLIICDN----- 136 (370)
Q Consensus 80 ~P~~i~~d~~--G~l~v~~~~g~I~~~~-~g-~~~~~~~~~------------~~p~~gl~~d~--~G~L~v~~~----- 136 (370)
.-.+|++++. +.+|+++..|+|++-. .| +++...... .... .|++++ .+.+|++..
T Consensus 22 ~i~~i~~~p~~~~~~y~~~~~ggv~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~-~ia~dp~~~~~~~~~~g~~~~~ 100 (763)
T 3a0f_A 22 FISGLVAHPTEKDLIYARTDIGGTYRWNAAKWEWEPITDFIINNALAGNGANLLGTE-SIALDPHNPDRLYLAQGDYVQW 100 (763)
T ss_dssp CEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCBTTCSSSCCCCCCSEE-EEECCTTCTTCEEEEECSCTTT
T ss_pred ceeEEEeCCCCCCEEEEEeccCcEEEECCCCCCeeECccCccccccCCCccccccee-EEEECCCCCCEEEEEecccccC
Confidence 5678899874 4799999778899998 44 455543311 1234 688886 357999764
Q ss_pred --CCceEEEcCCC--eEEEEeecC-C-c-ccc-cccceEEcCC--CcEEEEeCCCCCCCccceecccccCCCceEEEEeC
Q 017520 137 --ANGLHKVSEDG--VENFLSYVN-G-S-KLR-FANDVVEASD--GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDP 206 (370)
Q Consensus 137 --~~gi~~~~~~g--~~~~~~~~~-g-~-~~~-~~~~l~~d~~--G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~ 206 (370)
..+|++-...| ++.+..... + . .-. ....|++++. +.+|+... .+.|++=+-
T Consensus 101 ~~~~~i~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~~------------------~~~l~~S~D 162 (763)
T 3a0f_A 101 DPWAAFLVSDDRGKTFKQYRSPVPMGANDMGRNGGERLAVNPHWTDELWFGSR------------------TQGLWRSTD 162 (763)
T ss_dssp CSCCEEEEESSTTSSCEEEECSSCCCTTSTTTTSBCCEEECTTSTTCEEEECS------------------SSCEEEESS
T ss_pred CCCceEEEECCCCCCceeccCCcccCccccCccccceEEECCCCCCEEEEEeC------------------CCcEEEECC
Confidence 24566665555 555532111 0 0 001 1246888864 67888742 246776543
Q ss_pred CCCeEEEEecCCC-------CccceEEccC-CCEEEEEeCC
Q 017520 207 SSNITTLVADGFY-------FANGVALSRD-EDYVVVCESW 239 (370)
Q Consensus 207 ~t~~~~~~~~~~~-------~p~gi~~~~d-g~~l~v~~~~ 239 (370)
....++.+. .+. ....|++++. .+.+|++...
T Consensus 163 gG~TW~~~~-~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~ 202 (763)
T 3a0f_A 163 RAQTWSRMN-QLPDSSTYGIGIISVIFDPKNVGTAYVASHA 202 (763)
T ss_dssp TTSSCEECT-TSCCCSCTTTCEEEEEECSSSTTCEEEEESS
T ss_pred CCcCccccc-cCcccCCCccceEEEEECCCCCCEEEEEEeC
Confidence 333444332 221 1234567664 3447777665
No 328
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=93.34 E-value=3.8 Score=41.28 Aligned_cols=104 Identities=14% Similarity=0.069 Sum_probs=57.4
Q ss_pred cccceEEc-CCCc-EEEEeCCCCCCCccceecccccCCCceEEEEeCCCC-eEEEEecCCC-CccceEEccCCCEEEEEe
Q 017520 162 FANDVVEA-SDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSN-ITTLVADGFY-FANGVALSRDEDYVVVCE 237 (370)
Q Consensus 162 ~~~~l~~d-~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~-~~~~~~~~~~-~p~gi~~~~dg~~l~v~~ 237 (370)
......++ |||+ |.++... .+.....|+.+|.+++ +. +...+. ...+++|++||+.++++.
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~-------------~G~~~~~l~v~dl~~g~~~--l~~~~~~~~~~~~WspDg~~l~y~~ 239 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDM-------------SGNEVYTIEFKRISDPSQT--IADKVSGTNGEIVWGPDHTSLFYVT 239 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEES-------------SSSSCEEEEEEETTCTTCC--CCCCEEEECSCCEECSSTTEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeC-------------CCCceEEEEEEECCCCCEe--CCccccCceeeEEEecCCCEEEEEE
Confidence 44567999 9996 4444321 0011235999999887 52 111111 135789999998777765
Q ss_pred CC-----c-EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCC-EEEEE
Q 017520 238 SW-----K-CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGT-FWIAI 280 (370)
Q Consensus 238 ~~-----~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~-lwv~~ 280 (370)
.. . |+++++.++.......+......+-.++..++||+ |.+..
T Consensus 240 ~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~ 289 (751)
T 2xe4_A 240 KDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGS 289 (751)
T ss_dssp ECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEE
T ss_pred ECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEe
Confidence 42 2 88888765422222222211122223456789996 44444
No 329
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=93.03 E-value=6.3 Score=39.70 Aligned_cols=111 Identities=11% Similarity=0.086 Sum_probs=61.9
Q ss_pred ceEEc-CCCcE--EEEeCCC----ceEEEc-CCCeEEEEeecCCcccccccceEEcCCC-cEEEEeCCCCCCCccceecc
Q 017520 122 GLTST-KEGHL--IICDNAN----GLHKVS-EDGVENFLSYVNGSKLRFANDVVEASDG-SLYFTVSSSKYLPHEYCLDI 192 (370)
Q Consensus 122 gl~~d-~~G~L--~v~~~~~----gi~~~~-~~g~~~~~~~~~g~~~~~~~~l~~d~~G-~l~v~d~~~~~~~~~~~~~~ 192 (370)
+.+++ +||+. |..+..+ .|+.++ .+|.+.+..... ....++++++|| .|+++....
T Consensus 178 ~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~----~~~~~~~WspDg~~l~y~~~d~----------- 242 (751)
T 2xe4_A 178 EVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS----GTNGEIVWGPDHTSLFYVTKDE----------- 242 (751)
T ss_dssp EEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE----EECSCCEECSSTTEEEEEEECT-----------
T ss_pred eeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc----CceeeEEEecCCCEEEEEEECC-----------
Confidence 67899 99973 3334321 277777 444011111011 113467899998 576663210
Q ss_pred cccCCCceEEEEeCCCCeE--EEEe--cCCCCccceEEccCCCEEEEEeCCc----EEEEEeCCC
Q 017520 193 LEGKPHGQLLKYDPSSNIT--TLVA--DGFYFANGVALSRDEDYVVVCESWK----CRKYWLKGE 249 (370)
Q Consensus 193 ~~~~~~g~l~~~d~~t~~~--~~~~--~~~~~p~gi~~~~dg~~l~v~~~~~----l~~~~~~~~ 249 (370)
......|++++..+++. ..+. ....+-.++.+++||+.|+++.... |+.++++++
T Consensus 243 --~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 243 --TLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKG 305 (751)
T ss_dssp --TCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSC
T ss_pred --CCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence 00113688888876532 2222 1122345678999999888876332 888998764
No 330
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=90.41 E-value=15 Score=36.53 Aligned_cols=144 Identities=11% Similarity=0.103 Sum_probs=81.6
Q ss_pred CCCcEEEEec-----CCeEEEEe--CCeEEEEE-e------cCCC-ceeceEEcC-CCcEEEEeCC-------CceEEEc
Q 017520 88 KNGVIYTATR-----DGWIKRLQ--DGTWVNWK-F------IDSQ-TLVGLTSTK-EGHLIICDNA-------NGLHKVS 144 (370)
Q Consensus 88 ~~G~l~v~~~-----~g~I~~~~--~g~~~~~~-~------~~~~-p~~gl~~d~-~G~L~v~~~~-------~gi~~~~ 144 (370)
-++.||+--. ...+++++ +++++... . +..+ -+ +++.-. +|.|||.... ..+++++
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~h-s~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd 474 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCH-TFTTISRNNQLLLIGGRKAPHQGLSDNWIFD 474 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSC-EEEEETTTTEEEEECCBSSTTCBCCCCEEEE
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccce-EEEEEccCCEEEEEcCCCCCCCccccEEEEe
Confidence 4678887532 23588888 67777765 2 1112 13 344443 7889997432 2377888
Q ss_pred -CCC-eEEEEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecC--CC-
Q 017520 145 -EDG-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG--FY- 219 (370)
Q Consensus 145 -~~g-~~~~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~--~~- 219 (370)
.+. ++.+... +.. ..-+..++-.+|.||+--... ..+.+++||+.++.++.+... ..
T Consensus 475 ~~t~~W~~~~~~-p~~--R~~h~~~~~~~~~iyv~GG~~---------------~~~~v~~yd~~t~~W~~~~~~g~~p~ 536 (695)
T 2zwa_A 475 MKTREWSMIKSL-SHT--RFRHSACSLPDGNVLILGGVT---------------EGPAMLLYNVTEEIFKDVTPKDEFFQ 536 (695)
T ss_dssp TTTTEEEECCCC-SBC--CBSCEEEECTTSCEEEECCBC---------------SSCSEEEEETTTTEEEECCCSSGGGG
T ss_pred CCCCcEEECCCC-CCC--cccceEEEEcCCEEEEECCCC---------------CCCCEEEEECCCCceEEccCCCCCCC
Confidence 445 5554322 111 122334443488999884320 111699999999988776531 11
Q ss_pred ---CccceEEccCCCEEEEEeCC--------c-EEEEEeCCCC
Q 017520 220 ---FANGVALSRDEDYVVVCESW--------K-CRKYWLKGER 250 (370)
Q Consensus 220 ---~p~gi~~~~dg~~l~v~~~~--------~-l~~~~~~~~~ 250 (370)
....++++.+.+.+|+..-. + +++||+....
T Consensus 537 ~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 537 NSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp SCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred cccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 12235556553447776421 2 8999987653
No 331
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=89.33 E-value=13 Score=34.22 Aligned_cols=125 Identities=9% Similarity=0.114 Sum_probs=73.2
Q ss_pred CCcceEEcCCCcEEEEecCCeEEEEe-C-C-eEEEEEecCCCceeceEEcCCCcEEEEeCCCceEEEc-CCC-eEEEEee
Q 017520 80 HPEDASMDKNGVIYTATRDGWIKRLQ-D-G-TWVNWKFIDSQTLVGLTSTKEGHLIICDNANGLHKVS-EDG-VENFLSY 154 (370)
Q Consensus 80 ~P~~i~~d~~G~l~v~~~~g~I~~~~-~-g-~~~~~~~~~~~p~~gl~~d~~G~L~v~~~~~gi~~~~-~~g-~~~~~~~ 154 (370)
.+..|++ .+..|+++ .+|.|..|+ . - ............. .+..-+. ++.++...+.++.++ +++ ...+.
T Consensus 89 ~V~~l~f-d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~-~i~~~~p-~~av~~~dG~L~v~dl~~~~~~~~~-- 162 (388)
T 1xip_A 89 DVIFVCF-HGDQVLVS-TRNALYSLDLEELSEFRTVTSFEKPVF-QLKNVNN-TLVILNSVNDLSALDLRTKSTKQLA-- 162 (388)
T ss_dssp TEEEEEE-ETTEEEEE-ESSEEEEEESSSTTCEEEEEECSSCEE-EEEECSS-EEEEEETTSEEEEEETTTCCEEEEE--
T ss_pred CeeEEEE-CCCEEEEE-cCCcEEEEEchhhhccCccceeeccee-eEEecCC-CEEEEECCCCEEEEEccCCcccccc--
Confidence 4788899 45578888 678899998 2 1 1111211122233 4444432 466666566677777 555 43221
Q ss_pred cCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeE---EEEe------c---CCCCcc
Q 017520 155 VNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNIT---TLVA------D---GFYFAN 222 (370)
Q Consensus 155 ~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~---~~~~------~---~~~~p~ 222 (370)
..+..++++++| +.++. .+|.+..|++++++. ..+. . +-....
T Consensus 163 ------~~Vs~v~WSpkG-~~vg~------------------~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~ 217 (388)
T 1xip_A 163 ------QNVTSFDVTNSQ-LAVLL------------------KDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPL 217 (388)
T ss_dssp ------ESEEEEEECSSE-EEEEE------------------TTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEE
T ss_pred ------CCceEEEEcCCc-eEEEE------------------cCCcEEEEcCCCccccccceecCCcccccccCCCeeEE
Confidence 256789999999 55553 346777788877764 2231 1 224456
Q ss_pred ceEEccCCCEEEE
Q 017520 223 GVALSRDEDYVVV 235 (370)
Q Consensus 223 gi~~~~dg~~l~v 235 (370)
.|.+.+++.++.+
T Consensus 218 sI~wl~~~~flv~ 230 (388)
T 1xip_A 218 SVTILSPQDFLAV 230 (388)
T ss_dssp EEEESSSSEEEEE
T ss_pred EEEEecCCeEEEE
Confidence 6788877765443
No 332
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=89.27 E-value=2.8 Score=42.47 Aligned_cols=150 Identities=11% Similarity=0.027 Sum_probs=82.1
Q ss_pred cceEEcC--CCcEEEEecCCeEEEEe-CC-eEEEEEecCC----CceeceEEcC--CCcEEEEeCCCceEEEcCCC--eE
Q 017520 82 EDASMDK--NGVIYTATRDGWIKRLQ-DG-TWVNWKFIDS----QTLVGLTSTK--EGHLIICDNANGLHKVSEDG--VE 149 (370)
Q Consensus 82 ~~i~~d~--~G~l~v~~~~g~I~~~~-~g-~~~~~~~~~~----~p~~gl~~d~--~G~L~v~~~~~gi~~~~~~g--~~ 149 (370)
..|++|+ .+.+|+++ +|.|++-. .| .++.+..... ... -|.+.+ ++.||++....+|++-+..| ++
T Consensus 591 ~~i~~d~~~~~~~y~g~-~g~v~~S~DgG~tW~~~~~~lp~~~~~~~-~i~~~~~~~~~l~~~~~~~~l~~S~D~G~tW~ 668 (763)
T 3a0f_A 591 TGIAADRVQANTFYVYV-EGDFFVSTDGGKSYTKKGNGLPCCWTYTG-TPVTSNLRAGELWVSVKGVGIYHSTDFGNTFT 668 (763)
T ss_dssp SCEEECSSSTTCEEEEE-TTEEEEESSTTSBCEEECBTSCCSSCCCE-EEEECSSSTTCEEEEETTTEEEEESSTTSBCE
T ss_pred ceEEEeccCCCEEEEEc-CCCEEEEeCCCcCccccccCCCcccCccc-cEEECCCCCCcEEEEcCCCeEEEEcCCCCCce
Confidence 3677875 46799995 68898877 34 4555532221 112 155554 67899988666788877655 55
Q ss_pred EEEeecCCcccc--cccceEEc-C-CCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEec---CCCCcc
Q 017520 150 NFLSYVNGSKLR--FANDVVEA-S-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD---GFYFAN 222 (370)
Q Consensus 150 ~~~~~~~g~~~~--~~~~l~~d-~-~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~---~~~~p~ 222 (370)
.+...... ... .-..+++. + ...||+.-.. +....+.||+-+-....++.+.. .+..+.
T Consensus 669 ~~~~~~~~-~~~~~~~~g~~~~~~~~~~l~~~G~~-------------~~~~~~gl~~S~D~G~tW~~~~~~~~~~~~~~ 734 (763)
T 3a0f_A 669 ALAGSGSS-LNPAVFSIGAPQTPNATETLFLWGIP-------------SASQPEGLYMSTDNGGLWTRLNDDAHNYGGAT 734 (763)
T ss_dssp ECTTBTTT-BEEEEEEEECCSSTTSSCEEEEEEEC-------------STTSCSEEEEESSTTSCCEECSCTTCCTBCEE
T ss_pred EccCCCcc-cccceeEEeeecCCCCCceEEEEEEc-------------ccCCCcEEEEeCCCCCCcEeccCccccCCCcc
Confidence 54321111 000 00011222 2 2468876300 00124678887765555665542 233333
Q ss_pred ceEEccCC-CEEEEEeCCc-EEEEEeC
Q 017520 223 GVALSRDE-DYVVVCESWK-CRKYWLK 247 (370)
Q Consensus 223 gi~~~~dg-~~l~v~~~~~-l~~~~~~ 247 (370)
.|+.++.. ..||++..++ |+.-++.
T Consensus 735 ~i~~~p~~~~~v~~~T~GrGi~~g~~~ 761 (763)
T 3a0f_A 735 VISGDPRIYGRVYIGMNGRGIICAQAL 761 (763)
T ss_dssp EEEECTTSTTEEEEEEBSSCEEEEESC
T ss_pred eEEeCCCCCCEEEEeCCCCeEEEEecC
Confidence 57777743 4588888777 8776654
No 333
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=88.27 E-value=7.4 Score=38.41 Aligned_cols=109 Identities=16% Similarity=0.109 Sum_probs=64.2
Q ss_pred ceEEcC-CCcEEEEeCC------------CceEEEc-CCC-eEEEEeecCCcccccccceEEcCCCcEEEEeCCCCCCCc
Q 017520 122 GLTSTK-EGHLIICDNA------------NGLHKVS-EDG-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPH 186 (370)
Q Consensus 122 gl~~d~-~G~L~v~~~~------------~gi~~~~-~~g-~~~~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~ 186 (370)
..++.+ +|+||+.... ..+..+| .++ ++.+..... ....+...+++..+|+||+.-..
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~-~~~~~~~~~~~~~~g~lyv~GG~------ 262 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVT-KHDMFCPGISMDGNGQIVVTGGN------ 262 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEEC-SCCCSSCEEEECTTSCEEEECSS------
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCC-CCCCccccccCCCCCCEEEeCCC------
Confidence 566666 8899986421 1256777 445 443322111 11223445677789999998542
Q ss_pred cceecccccCCCceEEEEeCCCCeEEEEecCCCCc---cceEEccCCCEEEEEeC--C-----c-EEEEEeCCC
Q 017520 187 EYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFA---NGVALSRDEDYVVVCES--W-----K-CRKYWLKGE 249 (370)
Q Consensus 187 ~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~p---~gi~~~~dg~~l~v~~~--~-----~-l~~~~~~~~ 249 (370)
....+++||+.+++++.+. .+..+ .+.++.+||+ +|+..- . . +.+||+...
T Consensus 263 ----------~~~~v~~yd~~t~~W~~~~-~~~~~R~~~s~~~~~dg~-iyv~GG~~~~~~~~~~~e~yd~~t~ 324 (656)
T 1k3i_A 263 ----------DAKKTSLYDSSSDSWIPGP-DMQVARGYQSSATMSDGR-VFTIGGSWSGGVFEKNGEVYSPSSK 324 (656)
T ss_dssp ----------STTCEEEEEGGGTEEEECC-CCSSCCSSCEEEECTTSC-EEEECCCCCSSSCCCCEEEEETTTT
T ss_pred ----------CCCceEEecCcCCceeECC-CCCccccccceEEecCCe-EEEEeCcccCCcccccceEeCCCCC
Confidence 1236999999988877653 22222 3455666888 555432 1 2 899997543
No 334
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=85.37 E-value=22 Score=32.57 Aligned_cols=137 Identities=9% Similarity=0.045 Sum_probs=76.0
Q ss_pred CCcceEEcCCCcEEEEecCCeEEEEe--CCe---------EE--EEEecCCCceeceEEcCCCcEEEEeCCCceEEEc-C
Q 017520 80 HPEDASMDKNGVIYTATRDGWIKRLQ--DGT---------WV--NWKFIDSQTLVGLTSTKEGHLIICDNANGLHKVS-E 145 (370)
Q Consensus 80 ~P~~i~~d~~G~l~v~~~~g~I~~~~--~g~---------~~--~~~~~~~~p~~gl~~d~~G~L~v~~~~~gi~~~~-~ 145 (370)
....+++.+.+.++++....++..++ +.. ++ ....... +. .+++ ....|+++ .+.+|..++ .
T Consensus 39 ~~nlLais~~~gll~a~~~~~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~-~l~f-d~~~L~v~-~~~~l~v~dv~ 114 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSKAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VI-FVCF-HGDQVLVS-TRNALYSLDLE 114 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTEEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EE-EEEE-ETTEEEEE-ESSEEEEEESS
T ss_pred cccEEEEcCCCCEEEEeCCCEEEEEEhhHhhhhhccccccccceEEeeCCC-ee-EEEE-CCCEEEEE-cCCcEEEEEch
Confidence 45668888765555444333566676 211 11 1223334 77 8999 23357777 456788887 3
Q ss_pred CC--eEEEEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecCCCCccc
Q 017520 146 DG--VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANG 223 (370)
Q Consensus 146 ~g--~~~~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~p~g 223 (370)
+- ...+. ... . .++++..-+. ++.+.. .+|.|+.+|.++++...+. .....
T Consensus 115 sl~~~~~~~-~~~-~---~v~~i~~~~p-~~av~~------------------~dG~L~v~dl~~~~~~~~~---~~Vs~ 167 (388)
T 1xip_A 115 ELSEFRTVT-SFE-K---PVFQLKNVNN-TLVILN------------------SVNDLSALDLRTKSTKQLA---QNVTS 167 (388)
T ss_dssp STTCEEEEE-ECS-S---CEEEEEECSS-EEEEEE------------------TTSEEEEEETTTCCEEEEE---ESEEE
T ss_pred hhhccCccc-eee-c---ceeeEEecCC-CEEEEE------------------CCCCEEEEEccCCcccccc---CCceE
Confidence 32 12111 111 1 1233333222 233332 3478888888766654432 24668
Q ss_pred eEEccCCCEEEEEeCCc-EEEEEeCCC
Q 017520 224 VALSRDEDYVVVCESWK-CRKYWLKGE 249 (370)
Q Consensus 224 i~~~~dg~~l~v~~~~~-l~~~~~~~~ 249 (370)
++|+++| +.++..++ +..|++++.
T Consensus 168 v~WSpkG--~~vg~~dg~i~~~~~~~~ 192 (388)
T 1xip_A 168 FDVTNSQ--LAVLLKDRSFQSFAWRNG 192 (388)
T ss_dssp EEECSSE--EEEEETTSCEEEEEEETT
T ss_pred EEEcCCc--eEEEEcCCcEEEEcCCCc
Confidence 9999999 45555555 888887764
No 335
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=84.37 E-value=30 Score=35.01 Aligned_cols=146 Identities=16% Similarity=0.094 Sum_probs=78.4
Q ss_pred cceEEcC--CCcEEEEecCCeEEEEeC-C-eEEEEEecCCCc---eeceEE---cCCCcEEEEeCCCceEEEcCCC--eE
Q 017520 82 EDASMDK--NGVIYTATRDGWIKRLQD-G-TWVNWKFIDSQT---LVGLTS---TKEGHLIICDNANGLHKVSEDG--VE 149 (370)
Q Consensus 82 ~~i~~d~--~G~l~v~~~~g~I~~~~~-g-~~~~~~~~~~~p---~~gl~~---d~~G~L~v~~~~~gi~~~~~~g--~~ 149 (370)
..++.|+ .+.+|+++ .|.|++-.+ | .++.. ..+.| . .|+. ..+|.||++....+|++-...| ++
T Consensus 593 ~~i~~d~~~~~~~y~g~-~g~i~~S~DgG~tw~~~--~~~~p~~~~-~l~~~~~~~~g~l~~~~~~g~l~~StD~G~twt 668 (789)
T 1sqj_A 593 ANVLSDKVQDGTFYATD-GGKFFVSTDGGKSYAAK--GAGLVTGTS-LMPAVNPWVAGDVWVPVPEGGLFHSTDFGASFT 668 (789)
T ss_dssp SCEEECSSSTTCEEEEE-TTEEEEESSTTSEEEEE--CBTCCCCCC-CCCEECSSSTTCEEEEETTTEEEEESSTTSBCE
T ss_pred eeEEecccCCCEEEEEe-CCEEEEEcCCCcCeEcC--ccCCCcccc-eeeecCCCcCCcEEEEeCCCCEEEECCCCcceE
Confidence 4577775 35789995 677888774 3 34432 22222 2 3443 3577899998766788777656 55
Q ss_pred EEEeecCCccc-----ccccceEEcCC--C-cEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecCCC--
Q 017520 150 NFLSYVNGSKL-----RFANDVVEASD--G-SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFY-- 219 (370)
Q Consensus 150 ~~~~~~~g~~~-----~~~~~l~~d~~--G-~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~-- 219 (370)
.+ ...++..+ ..++.+..++. + .+|+.... ...+.||+=+-....++.+..++.
T Consensus 669 ~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~~---------------~~~~gv~~S~D~G~tW~~i~~~~~~~ 732 (789)
T 1sqj_A 669 RV-GTANATLVSVGAPKSKSDGKKASAPSAVFIWGTDKP---------------GSDIGLYRSDDNGSTWTRVNDQEHNY 732 (789)
T ss_dssp EC-TTCEEEEEEECCCC---------CCCCEEEEEESST---------------TSCSEEEEESSTTSSCEECCCTTCCT
T ss_pred Ec-ccceeEEEEecCcccccccccCCCCCcCEEEEEEec---------------CCcceEEEeCCCCccceeecCCCcCc
Confidence 54 22111110 12233344333 3 34544210 123678887655455665544433
Q ss_pred -CccceEEccC--CCEEEEEeCCc-EEEEEeCC
Q 017520 220 -FANGVALSRD--EDYVVVCESWK-CRKYWLKG 248 (370)
Q Consensus 220 -~p~gi~~~~d--g~~l~v~~~~~-l~~~~~~~ 248 (370)
.++.|..++. |+ +|++..++ |+.-++.+
T Consensus 733 ~~~~~i~~d~~~~g~-v~v~t~grGi~~~~~~~ 764 (789)
T 1sqj_A 733 SGPTMIEADPKVYGR-VYLGTNGRGIVYADLTN 764 (789)
T ss_dssp TCEEEEEECTTSTTC-EEEEEBSSCEEEEECCC
T ss_pred CccceeccCCccCCE-EEEEcCCceEEEeccCC
Confidence 2345666763 55 88888886 88888765
No 336
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=83.83 E-value=21 Score=30.91 Aligned_cols=132 Identities=11% Similarity=0.107 Sum_probs=69.9
Q ss_pred CCeEEEEe--CCeEEEEEecC-CC-ceeceEEcCCCcEEEEeCC-----CceEEEc-CCC-eEEEEeecCCcccccccce
Q 017520 98 DGWIKRLQ--DGTWVNWKFID-SQ-TLVGLTSTKEGHLIICDNA-----NGLHKVS-EDG-VENFLSYVNGSKLRFANDV 166 (370)
Q Consensus 98 ~g~I~~~~--~g~~~~~~~~~-~~-p~~gl~~d~~G~L~v~~~~-----~gi~~~~-~~g-~~~~~~~~~g~~~~~~~~l 166 (370)
...++++| +++++...... .+ -+ +++. -++.||+.... ..+.+++ .++ ++.+... +..+ .-..+
T Consensus 23 ~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~-p~~r--~~~~~ 97 (306)
T 3ii7_A 23 PQSCRYFNPKDYSWTDIRCPFEKRRDA-ACVF-WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGP-PTPR--DSLAA 97 (306)
T ss_dssp TTSEEEEETTTTEEEECCCCSCCCBSC-EEEE-ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECC-SSCC--BSCEE
T ss_pred CceEEEecCCCCCEecCCCCCccccee-EEEE-ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCC-Cccc--cceeE
Confidence 34688888 66666553221 11 12 3333 36789886431 3578888 455 6555332 2111 11222
Q ss_pred EEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecCCCCc---cceEEccCCCEEEEEeC-----
Q 017520 167 VEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFA---NGVALSRDEDYVVVCES----- 238 (370)
Q Consensus 167 ~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~p---~gi~~~~dg~~l~v~~~----- 238 (370)
+. -+++||+.-.... .......+++||+.+++++.+.. +..+ ...+. -+++ +|+..-
T Consensus 98 ~~-~~~~iyv~GG~~~-----------~~~~~~~~~~~d~~~~~W~~~~~-~p~~r~~~~~~~-~~~~-iyv~GG~~~~~ 162 (306)
T 3ii7_A 98 CA-AEGKIYTSGGSEV-----------GNSALYLFECYDTRTESWHTKPS-MLTQRCSHGMVE-ANGL-IYVCGGSLGNN 162 (306)
T ss_dssp EE-ETTEEEEECCBBT-----------TBSCCCCEEEEETTTTEEEEECC-CSSCCBSCEEEE-ETTE-EEEECCEESCT
T ss_pred EE-ECCEEEEECCCCC-----------CCcEeeeEEEEeCCCCceEeCCC-CcCCcceeEEEE-ECCE-EEEECCCCCCC
Confidence 22 3678988743200 11234579999999888876632 2222 12222 3444 777642
Q ss_pred -----Cc-EEEEEeCCC
Q 017520 239 -----WK-CRKYWLKGE 249 (370)
Q Consensus 239 -----~~-l~~~~~~~~ 249 (370)
.. +++||+...
T Consensus 163 ~~~~~~~~~~~yd~~~~ 179 (306)
T 3ii7_A 163 VSGRVLNSCEVYDPATE 179 (306)
T ss_dssp TTCEECCCEEEEETTTT
T ss_pred CcccccceEEEeCCCCC
Confidence 23 889997654
No 337
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=82.30 E-value=24 Score=30.67 Aligned_cols=129 Identities=14% Similarity=0.256 Sum_probs=67.2
Q ss_pred EEEEe--CCeEEEEEecC-CC-ceeceEEcCCCcEEEEeCC--------CceEEEc-CCC-eEEEEeecCCcccccccce
Q 017520 101 IKRLQ--DGTWVNWKFID-SQ-TLVGLTSTKEGHLIICDNA--------NGLHKVS-EDG-VENFLSYVNGSKLRFANDV 166 (370)
Q Consensus 101 I~~~~--~g~~~~~~~~~-~~-p~~gl~~d~~G~L~v~~~~--------~gi~~~~-~~g-~~~~~~~~~g~~~~~~~~l 166 (370)
+++++ +++++...... .+ -+ +++.. ++.|||.... ..+.+++ .+. ++.+... +... .-..+
T Consensus 80 ~~~~d~~~~~W~~~~~~p~~r~~~-~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~-p~~r--~~~~~ 154 (318)
T 2woz_A 80 FFQLDNVSSEWVGLPPLPSARCLF-GLGEV-DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNL-PIKV--YGHNV 154 (318)
T ss_dssp EEEEETTTTEEEECSCBSSCBCSC-EEEEE-TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCC-SSCE--ESCEE
T ss_pred EEEEeCCCCcEEECCCCCcccccc-ceEEE-CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCC-CCcc--cccEE
Confidence 77888 66666553221 11 12 33333 6789986431 1377777 455 5555322 2111 11233
Q ss_pred EEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecCCCCc---cceEEccCCCEEEEEeC-----
Q 017520 167 VEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFA---NGVALSRDEDYVVVCES----- 238 (370)
Q Consensus 167 ~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~p---~gi~~~~dg~~l~v~~~----- 238 (370)
++ -+|.||+--.... .......+++||+++++++.+.. ...+ .+++. -+++ +|+..-
T Consensus 155 ~~-~~~~iyv~GG~~~-----------~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~-~~~~-iyv~GG~~~~~ 219 (318)
T 2woz_A 155 IS-HNGMIYCLGGKTD-----------DKKCTNRVFIYNPKKGDWKDLAP-MKTPRSMFGVAI-HKGK-IVIAGGVTEDG 219 (318)
T ss_dssp EE-ETTEEEEECCEES-----------SSCBCCCEEEEETTTTEEEEECC-CSSCCBSCEEEE-ETTE-EEEEEEEETTE
T ss_pred EE-ECCEEEEEcCCCC-----------CCCccceEEEEcCCCCEEEECCC-CCCCcccceEEE-ECCE-EEEEcCcCCCC
Confidence 33 5788988743100 01124569999999988877642 2222 22232 2444 666541
Q ss_pred -Cc-EEEEEeCCC
Q 017520 239 -WK-CRKYWLKGE 249 (370)
Q Consensus 239 -~~-l~~~~~~~~ 249 (370)
.. +++||++..
T Consensus 220 ~~~~~~~yd~~~~ 232 (318)
T 2woz_A 220 LSASVEAFDLKTN 232 (318)
T ss_dssp EEEEEEEEETTTC
T ss_pred ccceEEEEECCCC
Confidence 12 889997653
No 338
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=79.11 E-value=22 Score=35.61 Aligned_cols=117 Identities=7% Similarity=-0.003 Sum_probs=66.9
Q ss_pred CceeceEEcCC--CcEEEEeCCCceEEEcCCC--eEEEEeecCCc--ccccccceEEcCC--CcEEEEeCCCCCCCccce
Q 017520 118 QTLVGLTSTKE--GHLIICDNANGLHKVSEDG--VENFLSYVNGS--KLRFANDVVEASD--GSLYFTVSSSKYLPHEYC 189 (370)
Q Consensus 118 ~p~~gl~~d~~--G~L~v~~~~~gi~~~~~~g--~~~~~~~~~g~--~~~~~~~l~~d~~--G~l~v~d~~~~~~~~~~~ 189 (370)
+.. +|++++. +.+|++....+|++.+..| ++.+....... ....+..|++||. +.+|++.......+
T Consensus 24 ~i~-~i~~~p~~~~~~~~~~~~ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~---- 98 (737)
T 2cn3_A 24 FMP-GIVFNETEKDLIYARAAIGGAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDW---- 98 (737)
T ss_dssp CCC-EEEECSSSTTCEEEECSSSCEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSS----
T ss_pred eee-EEEECCCCCCEEEEEecCCcEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEeccccccc----
Confidence 677 8999875 6799987667899988656 55543211100 1235678999973 58999864210000
Q ss_pred ecccccCCCceEEEEeCCCCeEEEEecCCC---------CccceEEccC-CCEEEEEeCC-c-EEEE
Q 017520 190 LDILEGKPHGQLLKYDPSSNITTLVADGFY---------FANGVALSRD-EDYVVVCESW-K-CRKY 244 (370)
Q Consensus 190 ~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~---------~p~gi~~~~d-g~~l~v~~~~-~-l~~~ 244 (370)
....++|+|=+-....++.+..... ....++++|. .+.+|+.... . |++-
T Consensus 99 -----~~~~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~g~gl~~S 160 (737)
T 2cn3_A 99 -----LPNMGAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTRCGNGLWRS 160 (737)
T ss_dssp -----SCCCCEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECSTTCCEEEE
T ss_pred -----ccCCccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeeccCCcEEEe
Confidence 0013567776544444554432221 1246888874 4557776633 3 6643
No 339
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=77.00 E-value=7.1 Score=35.21 Aligned_cols=69 Identities=16% Similarity=0.165 Sum_probs=37.6
Q ss_pred CCcEEEEeCCCceEEEc-CCC-eEEEEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEe
Q 017520 128 EGHLIICDNANGLHKVS-EDG-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYD 205 (370)
Q Consensus 128 ~G~L~v~~~~~gi~~~~-~~g-~~~~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d 205 (370)
+|.+|+++.++.|+.++ ++| ...-.......+.-....-+...+|.+|+.... .+|.|+.++
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~----------------~dG~l~a~~ 73 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPF----------------GDGNIYYFN 73 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCS----------------TTTEEEEEE
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEEC----------------CCCEEEEEE
Confidence 46788888777889999 678 444332210001000000000125567776421 468899999
Q ss_pred CCCCeEE
Q 017520 206 PSSNITT 212 (370)
Q Consensus 206 ~~t~~~~ 212 (370)
.++|..+
T Consensus 74 ~~~G~~~ 80 (339)
T 2be1_A 74 AHQGLQK 80 (339)
T ss_dssp TTTEEEE
T ss_pred CCCCcEE
Confidence 8776443
No 340
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=76.60 E-value=5.2 Score=38.70 Aligned_cols=83 Identities=13% Similarity=0.121 Sum_probs=54.5
Q ss_pred eEEEEeCCC-----CeEEEEecCCCCccceEEccCCCEEEEEeCCc--EEEEEeCCC------CC-Cceee-ecc-CCCC
Q 017520 200 QLLKYDPSS-----NITTLVADGFYFANGVALSRDEDYVVVCESWK--CRKYWLKGE------RK-GKLET-FAE-NLPG 263 (370)
Q Consensus 200 ~l~~~d~~t-----~~~~~~~~~~~~p~gi~~~~dg~~l~v~~~~~--l~~~~~~~~------~~-~~~~~-~~~-~~~g 263 (370)
++-++|... .....+...-..|.|+.++|||++++++.-.. +.+|+.+.- +. .-... ..+ .+.-
T Consensus 299 gv~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~Gl 378 (638)
T 3sbq_A 299 KTPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGL 378 (638)
T ss_dssp CCCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCS
T ss_pred CeeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCC
Confidence 567788754 23444455567899999999999999998766 888887521 11 11111 111 1222
Q ss_pred CCCceeECCCCCEEEEEec
Q 017520 264 APDNINLAPDGTFWIAIIK 282 (370)
Q Consensus 264 ~p~~i~~d~~G~lwv~~~~ 282 (370)
.|--.++|.+|+.|.+..-
T Consensus 379 GPlHt~Fd~~G~aYTtlfi 397 (638)
T 3sbq_A 379 GPLHTTFDGRGNAYTTLFI 397 (638)
T ss_dssp CEEEEEECSSSEEEEEETT
T ss_pred cccEEEECCCCceEeeeee
Confidence 4667889999999999853
No 341
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=75.36 E-value=39 Score=29.01 Aligned_cols=213 Identities=10% Similarity=0.032 Sum_probs=104.3
Q ss_pred eEEEEe--CCeEEEEEecC-CC-ceeceEEcCCCcEEEEeCC------CceEEEc-CCC-eEEEEeecCCcccccccceE
Q 017520 100 WIKRLQ--DGTWVNWKFID-SQ-TLVGLTSTKEGHLIICDNA------NGLHKVS-EDG-VENFLSYVNGSKLRFANDVV 167 (370)
Q Consensus 100 ~I~~~~--~g~~~~~~~~~-~~-p~~gl~~d~~G~L~v~~~~------~gi~~~~-~~g-~~~~~~~~~g~~~~~~~~l~ 167 (370)
.+.+++ +++++...... .+ -+ +++.. ++.||+.... ..+.+++ .+. ++.+... +..+ .-..++
T Consensus 31 ~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~-p~~r--~~~~~~ 105 (302)
T 2xn4_A 31 SVECYDFKEERWHQVAELPSRRCRA-GMVYM-AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANM-RDRR--STLGAA 105 (302)
T ss_dssp CEEEEETTTTEEEEECCCSSCCBSC-EEEEE-TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCC-SSCC--BSCEEE
T ss_pred cEEEEcCcCCcEeEcccCCcccccc-eEEEE-CCEEEEEeCcCCCccccceEEECCCCCceeeCCCC-Cccc--cceEEE
Confidence 477777 55665553211 11 12 33333 6789986432 2478888 455 6655332 1111 112233
Q ss_pred EcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecCCCCc---cceEEccCCCEEEEEeC------
Q 017520 168 EASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFA---NGVALSRDEDYVVVCES------ 238 (370)
Q Consensus 168 ~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~p---~gi~~~~dg~~l~v~~~------ 238 (370)
+ -+|.||+.-.... ......+++||+.+++++.+.. +..+ ..++. -+++ +|+..-
T Consensus 106 ~-~~~~iyv~GG~~~------------~~~~~~~~~~d~~~~~W~~~~~-~p~~r~~~~~~~-~~~~-iyv~GG~~~~~~ 169 (302)
T 2xn4_A 106 V-LNGLLYAVGGFDG------------STGLSSVEAYNIKSNEWFHVAP-MNTRRSSVGVGV-VGGL-LYAVGGYDVASR 169 (302)
T ss_dssp E-ETTEEEEEEEECS------------SCEEEEEEEEETTTTEEEEECC-CSSCCBSCEEEE-ETTE-EEEECCEETTTT
T ss_pred E-ECCEEEEEcCCCC------------CccCceEEEEeCCCCeEeecCC-CCCcccCceEEE-ECCE-EEEEeCCCCCCC
Confidence 3 3678888743100 0122468999999888877642 2222 12222 2444 777531
Q ss_pred --Cc-EEEEEeCCCCCCceeeeccCCCC--CCCceeECCCCCEEEEEecCchhHHHhhhcchhHHHHHHhCCcccccccc
Q 017520 239 --WK-CRKYWLKGERKGKLETFAENLPG--APDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFIT 313 (370)
Q Consensus 239 --~~-l~~~~~~~~~~~~~~~~~~~~~g--~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (370)
.. +++||+... +.+... ..+. .-..++. -++.||+--....
T Consensus 170 ~~~~~~~~yd~~~~---~W~~~~-~~p~~r~~~~~~~-~~~~iyv~GG~~~----------------------------- 215 (302)
T 2xn4_A 170 QCLSTVECYNATTN---EWTYIA-EMSTRRSGAGVGV-LNNLLYAVGGHDG----------------------------- 215 (302)
T ss_dssp EECCCEEEEETTTT---EEEEEC-CCSSCCBSCEEEE-ETTEEEEECCBSS-----------------------------
T ss_pred ccccEEEEEeCCCC---cEEECC-CCccccccccEEE-ECCEEEEECCCCC-----------------------------
Confidence 22 899997653 222222 2221 0111222 2567777632210
Q ss_pred CCCceEEEEECCCCcEEEEEeCCCCCccccceeEEEECCEEEEEe-CCC----CeEEEEeC
Q 017520 314 LGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVIS-LTS----NFIGKVQL 369 (370)
Q Consensus 314 ~~~~g~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~~g~L~~gs-~~~----~~i~~~~~ 369 (370)
......+..||++............. .....++..+++||+-+ ..+ +.+.++++
T Consensus 216 ~~~~~~~~~yd~~~~~W~~~~~~~~~--r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~ 274 (302)
T 2xn4_A 216 PLVRKSVEVYDPTTNAWRQVADMNMC--RRNAGVCAVNGLLYVVGGDDGSCNLASVEYYNP 274 (302)
T ss_dssp SSBCCCEEEEETTTTEEEEECCCSSC--CBSCEEEEETTEEEEECCBCSSSBCCCEEEEET
T ss_pred CcccceEEEEeCCCCCEeeCCCCCCc--cccCeEEEECCEEEEECCcCCCcccccEEEEcC
Confidence 11123478899877666655432211 12234445678877653 332 34566554
No 342
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=74.32 E-value=46 Score=29.37 Aligned_cols=86 Identities=15% Similarity=0.208 Sum_probs=45.9
Q ss_pred CCcEEEEe--cCCeEEEEe-C---CeEEEEEecC--CCc-eeceEEcCCCcEEEEeCC-----------CceEEEc-CCC
Q 017520 89 NGVIYTAT--RDGWIKRLQ-D---GTWVNWKFID--SQT-LVGLTSTKEGHLIICDNA-----------NGLHKVS-EDG 147 (370)
Q Consensus 89 ~G~l~v~~--~~g~I~~~~-~---g~~~~~~~~~--~~p-~~gl~~d~~G~L~v~~~~-----------~gi~~~~-~~g 147 (370)
++.||+.- ....+++++ . .+++...... .+- + ++++- ++.|||.... ..+.+++ .+.
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~-~~~~~-~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~ 96 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQA-TSAFI-DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN 96 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSC-EEEEE-TTEEEEECCEEECTTSCEEECCCEEEEETTTT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccc-eEEEE-CCEEEEEcCCCCCCCccceeeccEEEEeCCCC
Confidence 67888754 345799999 3 5666554322 121 2 33333 6789986322 2377787 445
Q ss_pred -eEEEEeecCCcccccccceEEcCCCcEEEEeC
Q 017520 148 -VENFLSYVNGSKLRFANDVVEASDGSLYFTVS 179 (370)
Q Consensus 148 -~~~~~~~~~g~~~~~~~~l~~d~~G~l~v~d~ 179 (370)
++.+....+. + ..-..+++ -+++||+--.
T Consensus 97 ~W~~~~~~~p~-~-r~~~~~~~-~~~~iyv~GG 126 (357)
T 2uvk_A 97 SWVKLMSHAPM-G-MAGHVTFV-HNGKAYVTGG 126 (357)
T ss_dssp EEEECSCCCSS-C-CSSEEEEE-ETTEEEEEEC
T ss_pred cEEECCCCCCc-c-cccceEEE-ECCEEEEEeC
Confidence 5544332101 1 12222333 6788988754
No 343
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=74.00 E-value=43 Score=28.91 Aligned_cols=130 Identities=17% Similarity=0.235 Sum_probs=67.0
Q ss_pred CeEEEEe--CCeEEEEEecC-CC-ceeceEEcCCCcEEEEeCC----------CceEEEc-CCC-eEEEEeecCCccccc
Q 017520 99 GWIKRLQ--DGTWVNWKFID-SQ-TLVGLTSTKEGHLIICDNA----------NGLHKVS-EDG-VENFLSYVNGSKLRF 162 (370)
Q Consensus 99 g~I~~~~--~g~~~~~~~~~-~~-p~~gl~~d~~G~L~v~~~~----------~gi~~~~-~~g-~~~~~~~~~g~~~~~ 162 (370)
..+++++ +++++...... .+ -. +++.. ++.||+.... ..+++++ .+. ++.+... +..+ .
T Consensus 39 ~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~-p~~r--~ 113 (308)
T 1zgk_A 39 SYLEAYNPSNGTWLRLADLQVPRSGL-AGCVV-GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPM-SVPR--N 113 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSC-EEEEE-TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCC-SSCC--B
T ss_pred ceEEEEcCCCCeEeECCCCCcccccc-eEEEE-CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCC-CcCc--c
Confidence 3578888 56666553211 11 12 33333 6788886432 2477788 445 5544322 1111 1
Q ss_pred ccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecCCCCc---cceEEccCCCEEEEEeC-
Q 017520 163 ANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFA---NGVALSRDEDYVVVCES- 238 (370)
Q Consensus 163 ~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~p---~gi~~~~dg~~l~v~~~- 238 (370)
-..+++ -+|+||+.-... .......+++||+.+++++.+.. +..+ ...+.. ++ .+|+..-
T Consensus 114 ~~~~~~-~~~~iyv~GG~~------------~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~~-~~-~iyv~GG~ 177 (308)
T 1zgk_A 114 RIGVGV-IDGHIYAVGGSH------------GCIHHNSVERYEPERDEWHLVAP-MLTRRIGVGVAVL-NR-LLYAVGGF 177 (308)
T ss_dssp TCEEEE-ETTEEEEECCEE------------TTEECCCEEEEETTTTEEEECCC-CSSCCBSCEEEEE-TT-EEEEECCB
T ss_pred ccEEEE-ECCEEEEEcCCC------------CCcccccEEEECCCCCeEeECCC-CCccccceEEEEE-CC-EEEEEeCC
Confidence 122332 368898874310 00123569999999888876542 2222 122222 44 4776531
Q ss_pred -----Cc-EEEEEeCCC
Q 017520 239 -----WK-CRKYWLKGE 249 (370)
Q Consensus 239 -----~~-l~~~~~~~~ 249 (370)
.. +++||+...
T Consensus 178 ~~~~~~~~~~~yd~~~~ 194 (308)
T 1zgk_A 178 DGTNRLNSAECYYPERN 194 (308)
T ss_dssp CSSCBCCCEEEEETTTT
T ss_pred CCCCcCceEEEEeCCCC
Confidence 12 899997653
No 344
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=72.80 E-value=46 Score=28.76 Aligned_cols=206 Identities=13% Similarity=0.014 Sum_probs=100.7
Q ss_pred CeEEEEe--CCeEEEEEecC--CCceeceEEcCCCcEEEEeCC-------C-----ceEEEc-CCC-eEEEEeecCCccc
Q 017520 99 GWIKRLQ--DGTWVNWKFID--SQTLVGLTSTKEGHLIICDNA-------N-----GLHKVS-EDG-VENFLSYVNGSKL 160 (370)
Q Consensus 99 g~I~~~~--~g~~~~~~~~~--~~p~~gl~~d~~G~L~v~~~~-------~-----gi~~~~-~~g-~~~~~~~~~g~~~ 160 (370)
..++++| ++++.....+. .+...+++. -++.||+.... . .+++++ .++ ++.+... +..+
T Consensus 13 ~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~-p~~r- 89 (315)
T 4asc_A 13 EGAVAYDPAANECYCASLSSQVPKNHVSLVT-KENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPL-PSPR- 89 (315)
T ss_dssp TEEEEEETTTTEEEEEECCCCSCSSEEEEEC-TTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCB-SSCE-
T ss_pred CceEEECCCCCeEecCCCCCCCCccceEEEE-ECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCC-Ccch-
Confidence 4688888 66666422111 222203333 47788886431 1 166777 455 5544222 2111
Q ss_pred ccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecCCCCc---cceEEccCCCEEEEEe
Q 017520 161 RFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFA---NGVALSRDEDYVVVCE 237 (370)
Q Consensus 161 ~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~p---~gi~~~~dg~~l~v~~ 237 (370)
.-..++. -++.||+.-..... ........+++||+.+++++.+.. +..+ ...+ ..+++ +|+..
T Consensus 90 -~~~~~~~-~~~~lyv~GG~~~~---------~~~~~~~~~~~~d~~~~~W~~~~~-~p~~r~~~~~~-~~~~~-iyv~G 155 (315)
T 4asc_A 90 -CLFGLGE-ALNSIYVVGGREIK---------DGERCLDSVMCYDRLSFKWGESDP-LPYVVYGHTVL-SHMDL-VYVIG 155 (315)
T ss_dssp -ESCEEEE-ETTEEEEECCEESS---------TTCCBCCCEEEEETTTTEEEECCC-CSSCCBSCEEE-EETTE-EEEEC
T ss_pred -hceeEEE-ECCEEEEEeCCcCC---------CCCcccceEEEECCCCCcEeECCC-CCCcccceeEE-EECCE-EEEEe
Confidence 1122333 36788887431000 001234579999999888876542 2222 1222 23444 66654
Q ss_pred CC-------c-EEEEEeCCCCCCceeeeccCCCCCCCc--eeECCCCCEEEEEecCchhHHHhhhcchhHHHHHHhCCcc
Q 017520 238 SW-------K-CRKYWLKGERKGKLETFAENLPGAPDN--INLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKL 307 (370)
Q Consensus 238 ~~-------~-l~~~~~~~~~~~~~~~~~~~~~g~p~~--i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (370)
-. . +++||+... +.+... ..+. |.. -+.--++.+|+--....
T Consensus 156 G~~~~~~~~~~~~~yd~~~~---~W~~~~-~~p~-~r~~~~~~~~~~~iyv~GG~~~----------------------- 207 (315)
T 4asc_A 156 GKGSDRKCLNKMCVYDPKKF---EWKELA-PMQT-ARSLFGATVHDGRIIVAAGVTD----------------------- 207 (315)
T ss_dssp CBCTTSCBCCCEEEEETTTT---EEEECC-CCSS-CCBSCEEEEETTEEEEEEEECS-----------------------
T ss_pred CCCCCCcccceEEEEeCCCC---eEEECC-CCCC-chhceEEEEECCEEEEEeccCC-----------------------
Confidence 22 1 899997653 222222 2221 111 11222567877643221
Q ss_pred ccccccCCCceEEEEECCCCcEEEEEeCCCCCccccceeEEEECCEEEEE
Q 017520 308 FSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVI 357 (370)
Q Consensus 308 ~~~~~~~~~~g~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~~g~L~~g 357 (370)
......+..||++.+........... .....++..+++||+-
T Consensus 208 ------~~~~~~~~~yd~~~~~W~~~~~~p~~--r~~~~~~~~~~~l~v~ 249 (315)
T 4asc_A 208 ------TGLTSSAEVYSITDNKWAPFEAFPQE--RSSLSLVSLVGTLYAI 249 (315)
T ss_dssp ------SSEEEEEEEEETTTTEEEEECCCSSC--CBSCEEEEETTEEEEE
T ss_pred ------CCccceEEEEECCCCeEEECCCCCCc--ccceeEEEECCEEEEE
Confidence 11123578899877766665432111 1223444567787774
No 345
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=72.12 E-value=36 Score=33.01 Aligned_cols=65 Identities=11% Similarity=0.117 Sum_probs=38.7
Q ss_pred EEEecCCCceeceEEcCCCcEEEEeCC-C-ceEEEc-C-------CCe----E-EEEeecCCcccccccceEEcCCCcEE
Q 017520 111 NWKFIDSQTLVGLTSTKEGHLIICDNA-N-GLHKVS-E-------DGV----E-NFLSYVNGSKLRFANDVVEASDGSLY 175 (370)
Q Consensus 111 ~~~~~~~~p~~gl~~d~~G~L~v~~~~-~-gi~~~~-~-------~g~----~-~~~~~~~g~~~~~~~~l~~d~~G~l~ 175 (370)
.+.+....|+ |+.++|||.-.++... . .+..++ + +++ . .......| ..|-..++|++|+.|
T Consensus 317 ~~iP~pksPH-Gv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~G---lGPlHt~Fd~~G~aY 392 (638)
T 3sbq_A 317 RYVPVPKNPH-GCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELG---LGPLHTTFDGRGNAY 392 (638)
T ss_dssp EEEEESSSCC-CEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCC---SCEEEEEECSSSEEE
T ss_pred EEEeCCCCCc-ceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCC---CcccEEEECCCCceE
Confidence 3344556799 9999999975554433 2 355554 2 111 1 11111122 356788999999999
Q ss_pred EEeC
Q 017520 176 FTVS 179 (370)
Q Consensus 176 v~d~ 179 (370)
.+-.
T Consensus 393 Ttlf 396 (638)
T 3sbq_A 393 TTLF 396 (638)
T ss_dssp EEET
T ss_pred eeee
Confidence 8843
No 346
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=71.24 E-value=51 Score=28.55 Aligned_cols=140 Identities=9% Similarity=0.093 Sum_probs=69.8
Q ss_pred cEEEEecCCeEEEEe--CCeEEEEEecC--CCceeceEEcCCCcEEEEeCC----Cc--------eEEEc-CCC-eEEEE
Q 017520 91 VIYTATRDGWIKRLQ--DGTWVNWKFID--SQTLVGLTSTKEGHLIICDNA----NG--------LHKVS-EDG-VENFL 152 (370)
Q Consensus 91 ~l~v~~~~g~I~~~~--~g~~~~~~~~~--~~p~~gl~~d~~G~L~v~~~~----~g--------i~~~~-~~g-~~~~~ 152 (370)
.||+-.. ..+.++| ++++....... .+...+++ ..++.||+.... .+ +++++ .++ ++.+.
T Consensus 17 ~i~~~GG-~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~ 94 (318)
T 2woz_A 17 LILLVND-TAAVAYDPMENECYLTALAEQIPRNHSSIV-TQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLP 94 (318)
T ss_dssp EEEEECS-SEEEEEETTTTEEEEEEECTTSCSSEEEEE-CSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECS
T ss_pred hhhhccc-cceEEECCCCCceecccCCccCCccceEEE-EECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECC
Confidence 4554332 2478888 66666532221 22220333 347889986541 01 66777 455 55442
Q ss_pred eecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecCCCCc---cceEEccC
Q 017520 153 SYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFA---NGVALSRD 229 (370)
Q Consensus 153 ~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~p---~gi~~~~d 229 (370)
.. +..+ .-..+++ -++.||+.-.... ........+++||+.+++++.+.. +..+ ...+. .+
T Consensus 95 ~~-p~~r--~~~~~~~-~~~~iyv~GG~~~----------~~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~-~~ 158 (318)
T 2woz_A 95 PL-PSAR--CLFGLGE-VDDKIYVVAGKDL----------QTEASLDSVLCYDPVAAKWSEVKN-LPIKVYGHNVIS-HN 158 (318)
T ss_dssp CB-SSCB--CSCEEEE-ETTEEEEEEEEBT----------TTCCEEEEEEEEETTTTEEEEECC-CSSCEESCEEEE-ET
T ss_pred CC-Cccc--cccceEE-ECCEEEEEcCccC----------CCCcccceEEEEeCCCCCEeECCC-CCCcccccEEEE-EC
Confidence 21 2111 1223333 3678888743100 001123569999999888876642 2222 22222 35
Q ss_pred CCEEEEEeC-------Cc-EEEEEeCCC
Q 017520 230 EDYVVVCES-------WK-CRKYWLKGE 249 (370)
Q Consensus 230 g~~l~v~~~-------~~-l~~~~~~~~ 249 (370)
++ +|+..- .. +++||+...
T Consensus 159 ~~-iyv~GG~~~~~~~~~~~~~yd~~~~ 185 (318)
T 2woz_A 159 GM-IYCLGGKTDDKKCTNRVFIYNPKKG 185 (318)
T ss_dssp TE-EEEECCEESSSCBCCCEEEEETTTT
T ss_pred CE-EEEEcCCCCCCCccceEEEEcCCCC
Confidence 54 666542 12 899997653
No 347
>3f6k_A Sortilin; protein sorting receptor, 10-bladed beta-propeller, Cys-rich ssortilin, sortilin VPS10P-D, protein-peptide complex, DEVE protein; HET: NAG BMA PGE; 2.00A {Homo sapiens}
Probab=67.27 E-value=30 Score=34.37 Aligned_cols=110 Identities=15% Similarity=0.152 Sum_probs=50.4
Q ss_pred ceEEcCCCcEEEEeCCCceEEEcCCC--eEEEEeecCCcccccccceEEcCC--CcEEEEeCCCCCCCccceecccccCC
Q 017520 122 GLTSTKEGHLIICDNANGLHKVSEDG--VENFLSYVNGSKLRFANDVVEASD--GSLYFTVSSSKYLPHEYCLDILEGKP 197 (370)
Q Consensus 122 gl~~d~~G~L~v~~~~~gi~~~~~~g--~~~~~~~~~g~~~~~~~~l~~d~~--G~l~v~d~~~~~~~~~~~~~~~~~~~ 197 (370)
.++-+++..+|+.....||++-+..| ++.+...........+..|+++|. +++|++.... + ...
T Consensus 49 vlt~~~~~~~~~~t~~ggvyrS~DgG~TW~~v~~~~~~~~~~~~~~IavdP~dp~~vyvag~~~--~----------~~~ 116 (685)
T 3f6k_A 49 VLTTFHVPLVIMTFGQSKLYRSEDYGKNFKDITDLINNTFIRTEFGMAIGPENSGKVVLTAEVS--G----------GSR 116 (685)
T ss_dssp EEEEECCCC-----CEEEEEEESSTTSSCEECGGGGTTCCBCGGGCEEECSTTCCCEEEEECCC--T----------TCS
T ss_pred EEccCCCCceEEeecCCeEEEEeCCCCCceECcCCCCCCcccceeEEEECCCCCCEEEEEEecc--C----------CCC
Confidence 33444444445544445677776556 665533222211234568999983 3788875310 0 012
Q ss_pred CceEEEEeCCCCeEEEEecCCCCccceEEccC-CCEEEEEeCCc-EEE
Q 017520 198 HGQLLKYDPSSNITTLVADGFYFANGVALSRD-EDYVVVCESWK-CRK 243 (370)
Q Consensus 198 ~g~l~~~d~~t~~~~~~~~~~~~p~gi~~~~d-g~~l~v~~~~~-l~~ 243 (370)
.++|++=+-.+..++.+.........++++|. .+.+|+....+ |++
T Consensus 117 ~g~v~rS~DgG~TW~~~~~p~~~~~~l~~~P~~~~~l~a~~~~~gly~ 164 (685)
T 3f6k_A 117 GGRIFRSSDFAKNFVQTDLPFHPLTQMMYSPQNSDYLLALSTENGLWV 164 (685)
T ss_dssp SCEEEEESSTTSSCEEEECSSCBSSCCEEETTEEEEEEEEBTTCCEEE
T ss_pred CceEEEECCCCceeEeccCCCCCceEEEEecCCCCEEEEEECCCCEEE
Confidence 46777765444445444322111124666653 23344443322 544
No 348
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=62.81 E-value=71 Score=27.17 Aligned_cols=140 Identities=15% Similarity=0.196 Sum_probs=75.1
Q ss_pred CCcEEEEe-c-----CCeEEEEe--CCe---EEEEEecC-CC-ceeceEEcCCCcEEEEeCC------CceEEEc-CCC-
Q 017520 89 NGVIYTAT-R-----DGWIKRLQ--DGT---WVNWKFID-SQ-TLVGLTSTKEGHLIICDNA------NGLHKVS-EDG- 147 (370)
Q Consensus 89 ~G~l~v~~-~-----~g~I~~~~--~g~---~~~~~~~~-~~-p~~gl~~d~~G~L~v~~~~------~gi~~~~-~~g- 147 (370)
++.||+-. . ...+++++ +++ ++...... .+ -+ +++.. ++.||+.... ..+.+++ .+.
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~-~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~~~~ 139 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLA-GATTL-GDMIYVSGGFDGSRRHTSMERYDPNIDQ 139 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSC-EEEEE-TTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccce-eEEEE-CCEEEEEcccCCCcccceEEEEcCCCCe
Confidence 57788643 1 24588998 556 66653321 11 12 33333 6889997532 2477888 455
Q ss_pred eEEEEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecCCCCcc---ce
Q 017520 148 VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFAN---GV 224 (370)
Q Consensus 148 ~~~~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~p~---gi 224 (370)
++.+...... . .-..+++ -+++||+.-.... ......+++||+.+++++.+. ....+. .+
T Consensus 140 W~~~~~~p~~-r--~~~~~~~-~~~~iyv~GG~~~------------~~~~~~~~~~d~~~~~W~~~~-~~p~~r~~~~~ 202 (301)
T 2vpj_A 140 WSMLGDMQTA-R--EGAGLVV-ASGVIYCLGGYDG------------LNILNSVEKYDPHTGHWTNVT-PMATKRSGAGV 202 (301)
T ss_dssp EEEEEECSSC-C--BSCEEEE-ETTEEEEECCBCS------------SCBCCCEEEEETTTTEEEEEC-CCSSCCBSCEE
T ss_pred EEECCCCCCC-c--ccceEEE-ECCEEEEECCCCC------------CcccceEEEEeCCCCcEEeCC-CCCcccccceE
Confidence 6655432211 1 1122232 3688998743210 012457999999998887763 222221 22
Q ss_pred EEccCCCEEEEEeC------Cc-EEEEEeCCC
Q 017520 225 ALSRDEDYVVVCES------WK-CRKYWLKGE 249 (370)
Q Consensus 225 ~~~~dg~~l~v~~~------~~-l~~~~~~~~ 249 (370)
+. -+++ +|+..- .. +++||++..
T Consensus 203 ~~-~~~~-i~v~GG~~~~~~~~~v~~yd~~~~ 232 (301)
T 2vpj_A 203 AL-LNDH-IYVVGGFDGTAHLSSVEAYNIRTD 232 (301)
T ss_dssp EE-ETTE-EEEECCBCSSSBCCCEEEEETTTT
T ss_pred EE-ECCE-EEEEeCCCCCcccceEEEEeCCCC
Confidence 22 2444 666542 12 899997653
No 349
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=62.24 E-value=73 Score=27.10 Aligned_cols=130 Identities=11% Similarity=0.150 Sum_probs=66.9
Q ss_pred CeEEEEe--CCeEEEEEecC-CCc-eeceEEcCCCcEEEEeCC------CceEEEc-CCC----eEEEEeecCCcccccc
Q 017520 99 GWIKRLQ--DGTWVNWKFID-SQT-LVGLTSTKEGHLIICDNA------NGLHKVS-EDG----VENFLSYVNGSKLRFA 163 (370)
Q Consensus 99 g~I~~~~--~g~~~~~~~~~-~~p-~~gl~~d~~G~L~v~~~~------~gi~~~~-~~g----~~~~~~~~~g~~~~~~ 163 (370)
..+++++ +++++...... .+. + +.+. -++.||+.... ..+++++ .++ ++.+... +..+ .-
T Consensus 31 ~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~-p~~r--~~ 105 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFLPSITRKRRYV-ASVS-LHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPM-NVRR--GL 105 (301)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSC-EEEE-ETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCC-SSCC--BS
T ss_pred eEEEEEcCCCCeEEeCCCCChhhccc-cEEE-ECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCC-CCCc--cc
Confidence 3578888 56666543211 111 2 3333 36788886432 2478888 322 3444221 2111 11
Q ss_pred cceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecCCCCc---cceEEccCCCEEEEEeC--
Q 017520 164 NDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFA---NGVALSRDEDYVVVCES-- 238 (370)
Q Consensus 164 ~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~p---~gi~~~~dg~~l~v~~~-- 238 (370)
..+++ -++.||+.-... .......+++||+.+++++.+..- ..+ ...+. -+++ +|+..-
T Consensus 106 ~~~~~-~~~~lyv~GG~~------------~~~~~~~~~~~d~~~~~W~~~~~~-p~~r~~~~~~~-~~~~-iyv~GG~~ 169 (301)
T 2vpj_A 106 AGATT-LGDMIYVSGGFD------------GSRRHTSMERYDPNIDQWSMLGDM-QTAREGAGLVV-ASGV-IYCLGGYD 169 (301)
T ss_dssp CEEEE-ETTEEEEECCBC------------SSCBCCEEEEEETTTTEEEEEEEC-SSCCBSCEEEE-ETTE-EEEECCBC
T ss_pred eeEEE-ECCEEEEEcccC------------CCcccceEEEEcCCCCeEEECCCC-CCCcccceEEE-ECCE-EEEECCCC
Confidence 22333 368899884321 011235799999998888766431 111 12222 2454 776631
Q ss_pred ----Cc-EEEEEeCCC
Q 017520 239 ----WK-CRKYWLKGE 249 (370)
Q Consensus 239 ----~~-l~~~~~~~~ 249 (370)
.. +++||+...
T Consensus 170 ~~~~~~~~~~~d~~~~ 185 (301)
T 2vpj_A 170 GLNILNSVEKYDPHTG 185 (301)
T ss_dssp SSCBCCCEEEEETTTT
T ss_pred CCcccceEEEEeCCCC
Confidence 12 899997654
No 350
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=56.40 E-value=96 Score=26.58 Aligned_cols=140 Identities=14% Similarity=0.222 Sum_probs=73.6
Q ss_pred CCcEEEEe-c---------CCeEEEEe--CCeEEEEEecC-CC-ceeceEEcCCCcEEEEeCC------CceEEEc-CCC
Q 017520 89 NGVIYTAT-R---------DGWIKRLQ--DGTWVNWKFID-SQ-TLVGLTSTKEGHLIICDNA------NGLHKVS-EDG 147 (370)
Q Consensus 89 ~G~l~v~~-~---------~g~I~~~~--~g~~~~~~~~~-~~-p~~gl~~d~~G~L~v~~~~------~gi~~~~-~~g 147 (370)
++.||+-. . ...+++++ +++++...... .+ -. +++.- +|.||+.... ..+.+++ .+.
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~ 147 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRI-GVGVI-DGHIYAVGGSHGCIHHNSVERYEPERD 147 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTC-EEEEE-TTEEEEECCEETTEECCCEEEEETTTT
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCcccc-EEEEE-CCEEEEEcCCCCCcccccEEEECCCCC
Confidence 57788643 1 23578888 56666553221 11 12 33332 6889997431 3477888 455
Q ss_pred -eEEEEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecCCCCc---cc
Q 017520 148 -VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFA---NG 223 (370)
Q Consensus 148 -~~~~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~p---~g 223 (370)
++.+... +... .-..+++ -++.||+.-.... ......+++||+++++++.+.. ...+ ..
T Consensus 148 ~W~~~~~~-p~~r--~~~~~~~-~~~~iyv~GG~~~------------~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~ 210 (308)
T 1zgk_A 148 EWHLVAPM-LTRR--IGVGVAV-LNRLLYAVGGFDG------------TNRLNSAECYYPERNEWRMITA-MNTIRSGAG 210 (308)
T ss_dssp EEEECCCC-SSCC--BSCEEEE-ETTEEEEECCBCS------------SCBCCCEEEEETTTTEEEECCC-CSSCCBSCE
T ss_pred eEeECCCC-Cccc--cceEEEE-ECCEEEEEeCCCC------------CCcCceEEEEeCCCCeEeeCCC-CCCccccce
Confidence 5544322 1111 1122333 2678988743210 0123579999999888876532 2222 12
Q ss_pred eEEccCCCEEEEEeC------Cc-EEEEEeCCC
Q 017520 224 VALSRDEDYVVVCES------WK-CRKYWLKGE 249 (370)
Q Consensus 224 i~~~~dg~~l~v~~~------~~-l~~~~~~~~ 249 (370)
++.. +++ +|+..- .. +++||++..
T Consensus 211 ~~~~-~~~-iyv~GG~~~~~~~~~v~~yd~~~~ 241 (308)
T 1zgk_A 211 VCVL-HNC-IYAAGGYDGQDQLNSVERYDVETE 241 (308)
T ss_dssp EEEE-TTE-EEEECCBCSSSBCCCEEEEETTTT
T ss_pred EEEE-CCE-EEEEeCCCCCCccceEEEEeCCCC
Confidence 2222 444 666542 12 899997653
No 351
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=52.99 E-value=1.1e+02 Score=26.12 Aligned_cols=144 Identities=15% Similarity=0.169 Sum_probs=75.6
Q ss_pred CCcEEEEe-----cCCeEEEEe--CCeEEEEEecC-CC-ceeceEEcCCCcEEEEeCC-------CceEEEc-CCC-eEE
Q 017520 89 NGVIYTAT-----RDGWIKRLQ--DGTWVNWKFID-SQ-TLVGLTSTKEGHLIICDNA-------NGLHKVS-EDG-VEN 150 (370)
Q Consensus 89 ~G~l~v~~-----~~g~I~~~~--~g~~~~~~~~~-~~-p~~gl~~d~~G~L~v~~~~-------~gi~~~~-~~g-~~~ 150 (370)
++.||+-. ....+++++ +++++...... .+ -+ +.+. -++.||+.... ..+.+++ .+. ++.
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~ 132 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSL-AACA-AEGKIYTSGGSEVGNSALYLFECYDTRTESWHT 132 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSC-EEEE-ETTEEEEECCBBTTBSCCCCEEEEETTTTEEEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccce-eEEE-ECCEEEEECCCCCCCcEeeeEEEEeCCCCceEe
Confidence 56788653 235688898 66777664322 11 12 2333 26789986432 2478888 455 655
Q ss_pred EEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecCCCCc---cceEEc
Q 017520 151 FLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFA---NGVALS 227 (370)
Q Consensus 151 ~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~p---~gi~~~ 227 (370)
+... +... .-..++. -+|+||+.-....... .......+++||+++++++.+.. ...+ ..++..
T Consensus 133 ~~~~-p~~r--~~~~~~~-~~~~iyv~GG~~~~~~--------~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~~ 199 (306)
T 3ii7_A 133 KPSM-LTQR--CSHGMVE-ANGLIYVCGGSLGNNV--------SGRVLNSCEVYDPATETWTELCP-MIEARKNHGLVFV 199 (306)
T ss_dssp ECCC-SSCC--BSCEEEE-ETTEEEEECCEESCTT--------TCEECCCEEEEETTTTEEEEECC-CSSCCBSCEEEEE
T ss_pred CCCC-cCCc--ceeEEEE-ECCEEEEECCCCCCCC--------cccccceEEEeCCCCCeEEECCC-ccchhhcceEEEE
Confidence 5332 1111 1122232 4678998743200000 00014579999999998877642 2222 122222
Q ss_pred cCCCEEEEEeC-------CcEEEEEeCCC
Q 017520 228 RDEDYVVVCES-------WKCRKYWLKGE 249 (370)
Q Consensus 228 ~dg~~l~v~~~-------~~l~~~~~~~~ 249 (370)
+++ +|+..- ..+++||+...
T Consensus 200 -~~~-i~v~GG~~~~~~~~~~~~yd~~~~ 226 (306)
T 3ii7_A 200 -KDK-IFAVGGQNGLGGLDNVEYYDIKLN 226 (306)
T ss_dssp -TTE-EEEECCEETTEEBCCEEEEETTTT
T ss_pred -CCE-EEEEeCCCCCCCCceEEEeeCCCC
Confidence 444 666531 12899997653
No 352
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=50.41 E-value=1.2e+02 Score=25.80 Aligned_cols=142 Identities=15% Similarity=0.167 Sum_probs=74.2
Q ss_pred CCcEEEEe------cCCeEEEEe--CCeEEEEEecC-CC-ceeceEEcCCCcEEEEeCC------CceEEEc-CCC-eEE
Q 017520 89 NGVIYTAT------RDGWIKRLQ--DGTWVNWKFID-SQ-TLVGLTSTKEGHLIICDNA------NGLHKVS-EDG-VEN 150 (370)
Q Consensus 89 ~G~l~v~~------~~g~I~~~~--~g~~~~~~~~~-~~-p~~gl~~d~~G~L~v~~~~------~gi~~~~-~~g-~~~ 150 (370)
++.||+-. ....++++| +++++...... .+ -+ +++. -++.||+.... ..+.+++ .+. ++.
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~ 138 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTL-GAAV-LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFH 138 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSC-EEEE-ETTEEEEEEEECSSCEEEEEEEEETTTTEEEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccce-EEEE-ECCEEEEEcCCCCCccCceEEEEeCCCCeEee
Confidence 67888753 123588888 66777654322 11 12 3333 26789886432 1366777 455 555
Q ss_pred EEeecCCcccccccceEEcCCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecCCCCc---cceEEc
Q 017520 151 FLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFA---NGVALS 227 (370)
Q Consensus 151 ~~~~~~g~~~~~~~~l~~d~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~p---~gi~~~ 227 (370)
+... +... .-..+++ -+++||+.-..... .......+++||+.+++++.+.. ...+ ..++.
T Consensus 139 ~~~~-p~~r--~~~~~~~-~~~~iyv~GG~~~~----------~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~- 202 (302)
T 2xn4_A 139 VAPM-NTRR--SSVGVGV-VGGLLYAVGGYDVA----------SRQCLSTVECYNATTNEWTYIAE-MSTRRSGAGVGV- 202 (302)
T ss_dssp ECCC-SSCC--BSCEEEE-ETTEEEEECCEETT----------TTEECCCEEEEETTTTEEEEECC-CSSCCBSCEEEE-
T ss_pred cCCC-CCcc--cCceEEE-ECCEEEEEeCCCCC----------CCccccEEEEEeCCCCcEEECCC-CccccccccEEE-
Confidence 5322 1111 1122332 36789987431000 00113569999999888877642 2222 12222
Q ss_pred cCCCEEEEEeC------Cc-EEEEEeCCC
Q 017520 228 RDEDYVVVCES------WK-CRKYWLKGE 249 (370)
Q Consensus 228 ~dg~~l~v~~~------~~-l~~~~~~~~ 249 (370)
-+++ +|+..- .. +++||++..
T Consensus 203 ~~~~-iyv~GG~~~~~~~~~~~~yd~~~~ 230 (302)
T 2xn4_A 203 LNNL-LYAVGGHDGPLVRKSVEVYDPTTN 230 (302)
T ss_dssp ETTE-EEEECCBSSSSBCCCEEEEETTTT
T ss_pred ECCE-EEEECCCCCCcccceEEEEeCCCC
Confidence 2444 666642 12 899997653
No 353
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=49.56 E-value=1.2e+02 Score=25.88 Aligned_cols=47 Identities=11% Similarity=-0.067 Sum_probs=27.4
Q ss_pred eEEEEeCCCCeEEEEecCCCCc---cceEEccCCCEEEEEeC------C---c-EEEEEeCCC
Q 017520 200 QLLKYDPSSNITTLVADGFYFA---NGVALSRDEDYVVVCES------W---K-CRKYWLKGE 249 (370)
Q Consensus 200 ~l~~~d~~t~~~~~~~~~~~~p---~gi~~~~dg~~l~v~~~------~---~-l~~~~~~~~ 249 (370)
.+++||+.+++++.+.. +..+ .+++.. ++ .+|+..- . . +++||+...
T Consensus 68 ~~~~~d~~~~~W~~~~~-~p~~r~~~~~~~~-~~-~lyv~GG~~~~~~~~~~~~~~~~d~~~~ 127 (315)
T 4asc_A 68 YFLQFDHLDSEWLGMPP-LPSPRCLFGLGEA-LN-SIYVVGGREIKDGERCLDSVMCYDRLSF 127 (315)
T ss_dssp EEEEEETTTTEEEECCC-BSSCEESCEEEEE-TT-EEEEECCEESSTTCCBCCCEEEEETTTT
T ss_pred ceEEecCCCCeEEECCC-CCcchhceeEEEE-CC-EEEEEeCCcCCCCCcccceEEEECCCCC
Confidence 48999999888876532 2222 122222 44 4666532 1 1 899997653
No 354
>2xk0_A Polycomb protein PCL; transcription, aromatic CAGE; NMR {Drosophila melanogaster}
Probab=47.04 E-value=22 Score=23.45 Aligned_cols=41 Identities=17% Similarity=0.152 Sum_probs=29.8
Q ss_pred CCceeECCCCCEEEEEecCchhHHHhhhcchhHHHHHHhCCccccccccCCCceEEEEECCCCcEEEEEeC
Q 017520 265 PDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVD 335 (370)
Q Consensus 265 p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~g~~~~~~~~ 335 (370)
-|-++.-+||.+|.|+.-. .....++++|+.+.+....+.+
T Consensus 20 eDVL~rw~DG~fYLGtIVd------------------------------~~~~~ClV~FeD~S~~Wv~~kd 60 (69)
T 2xk0_A 20 EDVFIKCNDGRFYLGTIID------------------------------QTSDQYLIRFDDQSEQWCEPDK 60 (69)
T ss_dssp CEEEEECTTSCEEEEEEEE------------------------------ECSSCEEEEETTCCEEEECTTT
T ss_pred CeEEEEecCCCEEEEEEEe------------------------------cCCceEEEEecCCcceeeeHHH
Confidence 3557788999999998632 4456788999888777665533
No 355
>3f6k_A Sortilin; protein sorting receptor, 10-bladed beta-propeller, Cys-rich ssortilin, sortilin VPS10P-D, protein-peptide complex, DEVE protein; HET: NAG BMA PGE; 2.00A {Homo sapiens}
Probab=42.09 E-value=2.7e+02 Score=27.56 Aligned_cols=82 Identities=9% Similarity=0.097 Sum_probs=42.7
Q ss_pred CcEEEEecCCeEEEEe-CC-eEEEEEecCCC-----ceeceEEcCC--CcEEEEeC------CCceEEEcCCC--eEEEE
Q 017520 90 GVIYTATRDGWIKRLQ-DG-TWVNWKFIDSQ-----TLVGLTSTKE--GHLIICDN------ANGLHKVSEDG--VENFL 152 (370)
Q Consensus 90 G~l~v~~~~g~I~~~~-~g-~~~~~~~~~~~-----p~~gl~~d~~--G~L~v~~~------~~gi~~~~~~g--~~~~~ 152 (370)
..+|.++..|+|+|-+ .| .++.+...... .. +|+++|. +++|++.. ..+|++-...| ++.+.
T Consensus 56 ~~~~~~t~~ggvyrS~DgG~TW~~v~~~~~~~~~~~~~-~IavdP~dp~~vyvag~~~~~~~~g~v~rS~DgG~TW~~~~ 134 (685)
T 3f6k_A 56 PLVIMTFGQSKLYRSEDYGKNFKDITDLINNTFIRTEF-GMAIGPENSGKVVLTAEVSGGSRGGRIFRSSDFAKNFVQTD 134 (685)
T ss_dssp CC-----CEEEEEEESSTTSSCEECGGGGTTCCBCGGG-CEEECSTTCCCEEEEECCCTTCSSCEEEEESSTTSSCEEEE
T ss_pred CceEEeecCCeEEEEeCCCCCceECcCCCCCCccccee-EEEECCCCCCEEEEEEeccCCCCCceEEEECCCCceeEecc
Confidence 3444444456788888 34 46665432221 24 6899873 36888764 35677766556 65543
Q ss_pred eecCCcccccccceEEcCC--CcEEEE
Q 017520 153 SYVNGSKLRFANDVVEASD--GSLYFT 177 (370)
Q Consensus 153 ~~~~g~~~~~~~~l~~d~~--G~l~v~ 177 (370)
... .....|+++|. +.+|..
T Consensus 135 ~p~-----~~~~~l~~~P~~~~~l~a~ 156 (685)
T 3f6k_A 135 LPF-----HPLTQMMYSPQNSDYLLAL 156 (685)
T ss_dssp CSS-----CBSSCCEEETTEEEEEEEE
T ss_pred CCC-----CCceEEEEecCCCCEEEEE
Confidence 211 11125777764 345555
No 356
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=40.24 E-value=2.1e+02 Score=25.75 Aligned_cols=75 Identities=16% Similarity=0.243 Sum_probs=52.5
Q ss_pred CCCccceEEccCCCEEEEEeCCc-EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCCEEEEEecCchhHHHhhhcchh
Q 017520 218 FYFANGVALSRDEDYVVVCESWK-CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKL 296 (370)
Q Consensus 218 ~~~p~gi~~~~dg~~l~v~~~~~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~ 296 (370)
..+|-.+.++..-..+|+-...+ |+.||+.+. ...|.. .+ ++..+++++...
T Consensus 259 ~DFPVamqvs~kygviyviTK~G~ihlyDleTg----t~i~~n---------rI-S~d~iF~ta~~~------------- 311 (365)
T 2xzh_A 259 NDFPVAMQISEKHDVVFLITKYGYIHLYDLETG----TCIYMN---------RI-SGETIFVTAPHE------------- 311 (365)
T ss_dssp TCCEEEEEEETTTTEEEEEETTSEEEEEETTTC----CEEEEE---------EC-CSSCEEEEEEEG-------------
T ss_pred CCceEEEEecccCCEEEEEeCCcEEEEEEcccC----cEEEEe---------cc-CCCceEEecccC-------------
Confidence 45788899999888899999988 999997653 222221 11 234688887542
Q ss_pred HHHHHHhCCccccccccCCCceEEEEECCCCcEEEEEeCCCC
Q 017520 297 IKHVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTG 338 (370)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~g~~~~~~~~~~g 338 (370)
..++++.++.+|+++..--+.+.
T Consensus 312 -------------------~~~Gi~~Vnr~GqVl~v~v~~~~ 334 (365)
T 2xzh_A 312 -------------------ATAGIIGVNRKGQVLSVCVEEEN 334 (365)
T ss_dssp -------------------GGTEEEEEETTCEEEEEEECTTT
T ss_pred -------------------CCCcEEEEcCCCEEEEEEECccc
Confidence 23579999999999887655443
No 357
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=33.57 E-value=3.1e+02 Score=25.77 Aligned_cols=74 Identities=16% Similarity=0.244 Sum_probs=52.1
Q ss_pred CCCccceEEccCCCEEEEEeCCc-EEEEEeCCCCCCceeeeccCCCCCCCceeECCCCCEEEEEecCchhHHHhhhcchh
Q 017520 218 FYFANGVALSRDEDYVVVCESWK-CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKL 296 (370)
Q Consensus 218 ~~~p~gi~~~~dg~~l~v~~~~~-l~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~ 296 (370)
..+|..+.+++.-..+|+-...+ |+.||+.+. ...|... + ++..+++++...
T Consensus 258 ~DFPvamqvs~kygviyviTK~G~i~lyDleTg----t~i~~nr---------I-s~~~iF~t~~~~------------- 310 (494)
T 1bpo_A 258 NDFPVAMQISEKHDVVFLITKYGYIHLYDLETG----TCIYMNR---------I-SGETIFVTAPHE------------- 310 (494)
T ss_dssp TCCEEEEEEETTTTEEEEEETTSEEEEEETTTC----CEEEEEE---------C-CSSCEEEEEEET-------------
T ss_pred cCceeEEEecccCCEEEEEecCceEEEEecccc----eeeeeec---------c-cCCceEEecccC-------------
Confidence 34788899999988899999888 999997653 2233211 1 234688887543
Q ss_pred HHHHHHhCCccccccccCCCceEEEEECCCCcEEEEEeCCC
Q 017520 297 IKHVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPT 337 (370)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~g~~~~~~~~~~ 337 (370)
..++++.+|.+|+++..--+.+
T Consensus 311 -------------------~~~Gi~~Vnr~GqVl~v~v~e~ 332 (494)
T 1bpo_A 311 -------------------ATAGIIGVNRKGQVLSVCVEEE 332 (494)
T ss_dssp -------------------TTTEEEEEETTCEEEEEEECTT
T ss_pred -------------------CCCcEEEEccCceEEEEEEccc
Confidence 2357899999999988765544
No 358
>3hx6_A Type 4 fimbrial biogenesis protein PILY1; beta propeller, pilus protein, cell adhesion; 2.10A {Pseudomonas aeruginosa}
Probab=28.18 E-value=78 Score=30.53 Aligned_cols=53 Identities=17% Similarity=0.142 Sum_probs=35.5
Q ss_pred CCceEEEEeCCCCeEEEEec---CCCCccce----EEccCC----CEEEEEeCCc-EEEEEeCCC
Q 017520 197 PHGQLLKYDPSSNITTLVAD---GFYFANGV----ALSRDE----DYVVVCESWK-CRKYWLKGE 249 (370)
Q Consensus 197 ~~g~l~~~d~~t~~~~~~~~---~~~~p~gi----~~~~dg----~~l~v~~~~~-l~~~~~~~~ 249 (370)
....||.+|.+++....... ....++|+ .+|.|+ +.+|+.+..+ |||||+.+.
T Consensus 221 ~~~~Lyv~d~~tG~li~~i~~~~~~~~~~Gls~~~~~D~d~Dg~~D~~YaGDl~GnlWRfDl~~~ 285 (570)
T 3hx6_A 221 DKAALLIIDMETGAITRKLEVTGRTGVPNGLSSPRLADNNSDGVADYAYAGDLQGNLWRFDLIAG 285 (570)
T ss_dssp CCEEEEEEETTTCCEEEEEEECCSTTSCCCEEEEEEECTTSSSBCCEEEEEETTSEEEEEECSCS
T ss_pred CccEEEEEECCCCceEEEEecCCCCccCCccccceEEecCCCCceeEEEEEeCCCcEEEEEcCCC
Confidence 34689999998887543221 11234554 355443 4799999988 999999764
No 359
>2e5q_A PHD finger protein 19; tudor domain, isoform B, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.34 E-value=1.3e+02 Score=19.40 Aligned_cols=43 Identities=14% Similarity=0.135 Sum_probs=30.6
Q ss_pred CCceeECCCCCEEEEEecCchhHHHhhhcchhHHHHHHhCCccccccccCCCceEEEEECCCCcEEEEEeC
Q 017520 265 PDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVD 335 (370)
Q Consensus 265 p~~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~g~~~~~~~~ 335 (370)
-+-++..+||.+|.++...- ......+++.|..+.+....|.|
T Consensus 12 qdVLarWsDGlfYlgtV~kV----------------------------~~~~~~ClV~FeD~s~~wv~~kd 54 (63)
T 2e5q_A 12 QYVLCRWTDGLYYLGKIKRV----------------------------SSSKQSCLVTFEDNSKYWVLWKD 54 (63)
T ss_dssp CEEEEECTTSCEEEEEECCC----------------------------CSTTSEEEEEETTSCEEEEEGGG
T ss_pred CEEEEEecCCCEEEEEEEEE----------------------------ecCCCEEEEEEccCceeEEEeec
Confidence 45688999999999997641 12345688888877777666644
No 360
>3s9j_A Member of DUF4221 family; 6-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.75A {Bacteroides vulgatus}
Probab=26.70 E-value=3.5e+02 Score=24.29 Aligned_cols=95 Identities=14% Similarity=0.122 Sum_probs=52.4
Q ss_pred CEEEEEeC--C--cEEEEEeCCCCCCceeeeccCCC---CCCC-ceeECCCCCEEEEEecCchhHHHhhhcchhHHHHHH
Q 017520 231 DYVVVCES--W--KCRKYWLKGERKGKLETFAENLP---GAPD-NINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLA 302 (370)
Q Consensus 231 ~~l~v~~~--~--~l~~~~~~~~~~~~~~~~~~~~~---g~p~-~i~~d~~G~lwv~~~~~~~~~~~~~~~~~~~~~~~~ 302 (370)
..|+.-+. . .|..||++..+....-.+-...| +.+. ++.+-.++.+|+.....
T Consensus 40 ~yL~~~N~~~~~~~i~~iDL~~~kl~k~i~~ekEGPNgi~~~~~~~~i~~~DsI~i~~~~~------------------- 100 (369)
T 3s9j_A 40 EYLHFENTQKSLYDIVIFDIENQQIAKRIPLHKTGPNGLPAVFGSRPSPDSQYILVAQNNI------------------- 100 (369)
T ss_dssp EEEEEEECSTTCCEEEEEETTTTEEEEEEECBSSSTTBCTTCCCEEESSSTTSEEEEEGGG-------------------
T ss_pred EEEEEeCCCCCcCcEEEEECCCCceeeeeccccCCCCCcccceeeEEecCCCEEEEEeCCc-------------------
Confidence 34555552 2 37778876654322222211111 1232 24455777899998663
Q ss_pred hCCccccccccCCCceEEEEECCCCcEEEEEeCCCCC-cccc-------ceeEEEECCEEEEEeC
Q 017520 303 AYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQ-LMSF-------VTSGLQVDNHLYVISL 359 (370)
Q Consensus 303 ~~~~~~~~~~~~~~~g~v~~~~~~g~~~~~~~~~~g~-~~~~-------~t~~~~~~g~L~~gs~ 359 (370)
..|+.+|.+|+++..+.-.... .... -..+...++.|+++..
T Consensus 101 ---------------~~i~l~n~~G~~~~k~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~ 150 (369)
T 3s9j_A 101 ---------------SRLSSINSQGEIIRNYNFQTPEGRFTPLSFGSYYNAPAFIKDSCIFLRQE 150 (369)
T ss_dssp ---------------TEEEEECTTCCEEEEEECCCTTSCCCCCCCBTTTTBCCEEETTEEEEECC
T ss_pred ---------------ceEEEECCCceEEEEEecCCCccccccccccccccCcceecCceEEEecc
Confidence 3589999999999987443221 1111 1344556677887643
No 361
>2m0o_A PHD finger protein 1; tudor domain, H3K36ME3 binding, peptide binding protein; HET: M3L; NMR {Homo sapiens}
Probab=22.32 E-value=68 Score=21.62 Aligned_cols=18 Identities=28% Similarity=0.466 Sum_probs=14.3
Q ss_pred CCceeECCCCCEEEEEec
Q 017520 265 PDNINLAPDGTFWIAIIK 282 (370)
Q Consensus 265 p~~i~~d~~G~lwv~~~~ 282 (370)
-|-++.-+||.+|.|+..
T Consensus 31 eDVLarwsDGlfYLGTI~ 48 (79)
T 2m0o_A 31 QDVLARWTDGLLYLGTIK 48 (79)
T ss_dssp CEEEBCCTTSCCCEEEEE
T ss_pred CEEEEEecCCCEEeEEEE
Confidence 345777899999999865
No 362
>3elq_A Arylsulfate sulfotransferase; beta propeller, protein-substrate complex, periplasm, transesterification, phenol, bacteria; 2.00A {Escherichia coli} PDB: 3ett_A* 3ets_A*
Probab=21.64 E-value=3.4e+02 Score=26.11 Aligned_cols=19 Identities=16% Similarity=0.270 Sum_probs=16.2
Q ss_pred EEEECCCCcEEEEEeCCCC
Q 017520 320 LIHVAEDGTIIRNLVDPTG 338 (370)
Q Consensus 320 v~~~~~~g~~~~~~~~~~g 338 (370)
++++|..|++++.+..+.+
T Consensus 228 i~elD~~Gkvv~~~~lp~g 246 (571)
T 3elq_A 228 WYEFDMMGQVLEDHKLPRG 246 (571)
T ss_dssp EEEECTTCCEEEEEECCTT
T ss_pred EEEECCCCcEEEEEECCCC
Confidence 7899999999998887765
No 363
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=21.10 E-value=7.5e+02 Score=26.09 Aligned_cols=124 Identities=14% Similarity=0.065 Sum_probs=69.0
Q ss_pred CCeEEEEe--CCeEEEEE--ecCCCceeceEEcCCCcEEEEeCCCceEEEc--CCC-eEEEEeecCCcccccccceEEc-
Q 017520 98 DGWIKRLQ--DGTWVNWK--FIDSQTLVGLTSTKEGHLIICDNANGLHKVS--EDG-VENFLSYVNGSKLRFANDVVEA- 169 (370)
Q Consensus 98 ~g~I~~~~--~g~~~~~~--~~~~~p~~gl~~d~~G~L~v~~~~~gi~~~~--~~g-~~~~~~~~~g~~~~~~~~l~~d- 169 (370)
.|+|+.++ +++++.+. ...+.+. +++.- +|.|.++- ++.++.++ ++. ++.-... +..+..+.+.
T Consensus 863 ~Gri~vf~v~~~kL~lv~~~~v~g~v~-al~~~-~g~Lla~i-g~~l~vy~l~~~~~L~~~~~~-----~~~i~~~~l~~ 934 (1158)
T 3ei3_A 863 QGRIVVFQYSDGKLQTVAEKEVKGAVY-SMVEF-NGKLLASI-NSTVRLYEWTTEKELRTECNH-----YNNIMALYLKT 934 (1158)
T ss_dssp CEEEEEEEEETTEEEEEEEEEESSCEE-EEEEE-TTEEEEEE-TTEEEEEEECTTSCEEEEEEE-----CCCSCEEEEEE
T ss_pred ceEEEEEEEECCEEEEEEEEEcCCcCE-EEeee-CCEEEEEc-CCEEEEEECCCCceEEEEeec-----cccEEEEEEec
Confidence 57888888 66666553 3456677 77654 57877775 45566665 344 4411111 1112122222
Q ss_pred CCCcEEEEeCCCCCCCccceecccccCCCceEEEEeCCCCeEEEEecCCCC--ccceEEccCCCEEEEEeCCc-E--EEE
Q 017520 170 SDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYF--ANGVALSRDEDYVVVCESWK-C--RKY 244 (370)
Q Consensus 170 ~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~--p~gi~~~~dg~~l~v~~~~~-l--~~~ 244 (370)
..+.++++|.. ..=.+++|+.+.++...++.+... ...+++=.+ +.+.+++..+ | .++
T Consensus 935 ~~~~I~vgD~~----------------~Sv~~~~y~~~~~~L~~~a~D~~~~~vta~~~ld~-~t~l~aD~~gNl~vl~~ 997 (1158)
T 3ei3_A 935 KGDFILVGDLM----------------RSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDD-DNFLGAENAFNLFVCQK 997 (1158)
T ss_dssp ETTEEEEEESS----------------BCEEEEEEETTTTEEEEEEECCSCBCEEEEEEEET-TEEEEEETTSEEEEEEE
T ss_pred cCCEEEEEEhh----------------heEEEEEEEcCCCeEEEEEeecccccEEEEEEEcc-CcEEEEcCCCcEEEEec
Confidence 24578899863 223577888888888887765432 222222223 4577788877 4 455
Q ss_pred Ee
Q 017520 245 WL 246 (370)
Q Consensus 245 ~~ 246 (370)
+.
T Consensus 998 ~~ 999 (1158)
T 3ei3_A 998 DS 999 (1158)
T ss_dssp CT
T ss_pred CC
Confidence 44
No 364
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=20.57 E-value=6e+02 Score=24.80 Aligned_cols=115 Identities=10% Similarity=0.087 Sum_probs=61.3
Q ss_pred ceEEcCCCcEEEEeCC-----CceEEEc-CCC-eEEEE-eec-CCcc-cccccceEEcC-CCcEEEEeCCCCCCCcccee
Q 017520 122 GLTSTKEGHLIICDNA-----NGLHKVS-EDG-VENFL-SYV-NGSK-LRFANDVVEAS-DGSLYFTVSSSKYLPHEYCL 190 (370)
Q Consensus 122 gl~~d~~G~L~v~~~~-----~gi~~~~-~~g-~~~~~-~~~-~g~~-~~~~~~l~~d~-~G~l~v~d~~~~~~~~~~~~ 190 (370)
+.+..-++.|||.... ..+++++ .++ ++.+. ... ...+ -..-+.+++-. +|.||+.-.....
T Consensus 391 g~~~~~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~------- 463 (695)
T 2zwa_A 391 GDVDVAGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAP------- 463 (695)
T ss_dssp CEEEECSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSST-------
T ss_pred eEEEEECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCC-------
Confidence 4333346789986532 2478888 555 66554 210 0011 11223444444 7889987442100
Q ss_pred cccccCCCceEEEEeCCCCeEEEEecCCCCc---cceEEccCCCEEEEEeC-C---cEEEEEeCCC
Q 017520 191 DILEGKPHGQLLKYDPSSNITTLVADGFYFA---NGVALSRDEDYVVVCES-W---KCRKYWLKGE 249 (370)
Q Consensus 191 ~~~~~~~~g~l~~~d~~t~~~~~~~~~~~~p---~gi~~~~dg~~l~v~~~-~---~l~~~~~~~~ 249 (370)
......+++||+.+++++.+.. ...| ...+.-.+++ +|+..- . .+++||+...
T Consensus 464 ----~~~~~dv~~yd~~t~~W~~~~~-~p~~R~~h~~~~~~~~~-iyv~GG~~~~~~v~~yd~~t~ 523 (695)
T 2zwa_A 464 ----HQGLSDNWIFDMKTREWSMIKS-LSHTRFRHSACSLPDGN-VLILGGVTEGPAMLLYNVTEE 523 (695)
T ss_dssp ----TCBCCCCEEEETTTTEEEECCC-CSBCCBSCEEEECTTSC-EEEECCBCSSCSEEEEETTTT
T ss_pred ----CCccccEEEEeCCCCcEEECCC-CCCCcccceEEEEcCCE-EEEECCCCCCCCEEEEECCCC
Confidence 0123469999999888876632 2222 2333323666 666542 2 2899997653
Done!