BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017521
(370 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q90972|RNF13_CHICK E3 ubiquitin-protein ligase RNF13 OS=Gallus gallus GN=RNF13 PE=1
SV=1
Length = 381
Score = 116 bits (290), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/235 (33%), Positives = 118/235 (50%), Gaps = 29/235 (12%)
Query: 2 SSAFVLTIRG-GCSFEDKVRNAQKAGFEAAIVYDNEDDGVLVAMAGNS----AGIKIHAV 56
S+AF++ IR C+F+ KV NAQ+AG++AAIV+ N D L++M N I I +V
Sbjct: 90 STAFIVLIRRLECNFDIKVLNAQRAGYKAAIVH-NVDSDDLISMGSNDIEILKKIDIPSV 148
Query: 57 FVSKASGEKLKQ-YAGSTDMEIWIIPSFENSAWSIMAISFISLLAMSAVLATCFFVRRHR 115
F+ +AS LK+ + + +IP F + I F+ ++ + +L F + +
Sbjct: 149 FIGEASANSLKEEFTYEKGGHVVLIPEF-SLPLEYYLIPFLIIVGICLILIVIFMITKFV 207
Query: 116 IRREAPRASRGREFHGMSRRLVKAMPSLIFTAVVEDNCTSRTCAICLEDYSVGEKLRILP 175
+ + + + +K +P F E + CAICL++Y G+KLRILP
Sbjct: 208 ------QDRHRARRNRLRKDQLKKLPVHKFKKGDEYD----VCAICLDEYEDGDKLRILP 257
Query: 176 CRHKFHAFCVDSWLTSWRTFCPVCKRDARTSTG-----------EPPASESTPLL 219
C H +H CVD WLT + CPVCK+ S G E SE+TPLL
Sbjct: 258 CSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSDSETDSSQEENEVSENTPLL 312
>sp|Q9H6Y7|RN167_HUMAN E3 ubiquitin-protein ligase RNF167 OS=Homo sapiens GN=RNF167 PE=1
SV=1
Length = 350
Score = 115 bits (288), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 87/261 (33%), Positives = 121/261 (46%), Gaps = 46/261 (17%)
Query: 2 SSAFV-LTIRGGCSFEDKVRNAQKAGFEAAIVYDNEDDGVLVAMAGNSAGIK----IHAV 56
S F+ L R C+F+ KV NAQKAG+ AA+V+ N + L+ M NS I+ I +V
Sbjct: 80 GSVFIALLRRFDCNFDLKVLNAQKAGYGAAVVH-NVNSNELLNMVWNSEEIQQQIWIPSV 138
Query: 57 FVSKASGEKLKQ-YAGSTDMEIWIIP--SFENSAWSIMAISFISLL--AMSAVLATCFFV 111
F+ + S E L+ + + ++P +F + I + LL AM AV+
Sbjct: 139 FIGERSSEYLRALFVYEKGARVLLVPDNTFPLGYYLIPFTGIVGLLVLAMGAVMIARCIQ 198
Query: 112 RRHRIRREAPRASRGREFHGMSRRLVKAMPSLIFTAVVEDNCTSRTCAICLEDYSVGEKL 171
R R++R RL K I T + CAICL++Y G+KL
Sbjct: 199 HRKRLQRN---------------RLTKEQLKQIPTHDYQKGDQYDVCAICLDEYEDGDKL 243
Query: 172 RILPCRHKFHAFCVDSWLTSWRTFCPVCKRDAR-----------------TSTGEP---P 211
R+LPC H +H+ CVD WLT R CP+CK+ GEP P
Sbjct: 244 RVLPCAHAYHSRCVDPWLTQTRKTCPICKQPVHRGPGDEDQEEETQGQEEGDEGEPRDHP 303
Query: 212 ASESTPLLSSSPASSSILSSI 232
ASE TPLL SSP + S+
Sbjct: 304 ASERTPLLGSSPTLPTSFGSL 324
>sp|Q0VD51|RNF13_BOVIN E3 ubiquitin-protein ligase RNF13 OS=Bos taurus GN=RNF13 PE=2 SV=1
Length = 380
Score = 115 bits (288), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 83/254 (32%), Positives = 123/254 (48%), Gaps = 33/254 (12%)
Query: 2 SSAFVLTIRG-GCSFEDKVRNAQKAGFEAAIVYDNEDDGVLVAMAGNS----AGIKIHAV 56
S F++ IR C+F++KV NAQ+AG++AAIV+ N D L++M N I I +V
Sbjct: 90 SGTFIVLIRRLDCNFDEKVLNAQRAGYKAAIVH-NVDSDDLISMGSNDIEVLKKIDIPSV 148
Query: 57 FVSKASGEKLK-QYAGSTDMEIWIIPSFENSAWSIMAISFISLLAMSAVLATCFFVRRHR 115
F+ ++S LK ++ I ++P F + I F+ ++ + +L F + +
Sbjct: 149 FIGESSANSLKDEFTYEKGGHIILVPEF-SLPLEYYLIPFLIIVGICLILIVIFMITKFV 207
Query: 116 IRREAPRASRGREFHGMSRRLVKAMPSLIFTAVVEDNCTSRTCAICLEDYSVGEKLRILP 175
+ + + + +K +P F E CAICL++Y G+KLRILP
Sbjct: 208 ------QDRHRARRNRLRKDQLKKLPVHKFKKGDE----YDVCAICLDEYEDGDKLRILP 257
Query: 176 CRHKFHAFCVDSWLTSWRTFCPVCKRDARTSTG-----------EPPASESTPLL----S 220
C H +H CVD WLT + CPVCK+ S G E SE TPLL S
Sbjct: 258 CSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSDSDTDSSQEENEVSEHTPLLRPLAS 317
Query: 221 SSPASSSILSSIRS 234
+S S LS RS
Sbjct: 318 ASTQSFGALSESRS 331
>sp|Q66HG0|RNF13_RAT E3 ubiquitin-protein ligase RNF13 OS=Rattus norvegicus GN=Rnf13
PE=2 SV=1
Length = 380
Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 126/263 (47%), Gaps = 32/263 (12%)
Query: 2 SSAFVLTIRG-GCSFEDKVRNAQKAGFEAAIVYDNEDDGVLVAMAGNSAGI----KIHAV 56
S F++ IR C+F+ KV NAQ+AG++AAIV+ N D L++M N I I +V
Sbjct: 90 SGTFIVLIRRLDCNFDIKVLNAQRAGYKAAIVH-NVDSDDLISMGSNDIDILKKIDIPSV 148
Query: 57 FVSKASGEKLK-QYAGSTDMEIWIIPSFENSAWSIMAISFISLLAMSAVLATCFFVRRHR 115
F+ ++S LK ++ + ++P + I F+ ++ + +L F + +
Sbjct: 149 FIGESSANSLKDEFTYEKGGHVILVPEL-SLPLEYYLIPFLIIVGICLILIVIFMITKFV 207
Query: 116 IRREAPRASRGREFHGMSRRLVKAMPSLIFTAVVEDNCTSRTCAICLEDYSVGEKLRILP 175
+ + + + +K +P F E CAICLE+Y G+KLRILP
Sbjct: 208 ------QDRHRNRRNRLRKDQLKKLPVHKFKKGDE----YDVCAICLEEYEDGDKLRILP 257
Query: 176 CRHKFHAFCVDSWLTSWRTFCPVCKRDARTSTG-----------EPPASESTPLLSSSPA 224
C H +H CVD WLT + CPVCK+ S G E SE TPLL P
Sbjct: 258 CSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSDSDTDSSQEENQVSEHTPLL---PP 314
Query: 225 SSSILSSIRSSLASSSALHIPPS 247
S+S + SL+ S + H+ S
Sbjct: 315 SASARTQSFGSLSESHSHHMTES 337
>sp|O54965|RNF13_MOUSE E3 ubiquitin-protein ligase RNF13 OS=Mus musculus GN=Rnf13 PE=1
SV=2
Length = 381
Score = 113 bits (282), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 124/259 (47%), Gaps = 32/259 (12%)
Query: 2 SSAFVLTIRG-GCSFEDKVRNAQKAGFEAAIVYDNEDDGVLVAMAGNSAG----IKIHAV 56
S F++ IR C+F+ KV NAQ+AG++AAIV+ N D L++M N I I +V
Sbjct: 90 SGTFIVLIRRLDCNFDIKVLNAQRAGYKAAIVH-NVDSDDLISMGSNDIDTLKKIDIPSV 148
Query: 57 FVSKASGEKLK-QYAGSTDMEIWIIPSFENSAWSIMAISFISLLAMSAVLATCFFVRRHR 115
F+ ++S LK ++ I ++P + I F+ ++ + +L F + +
Sbjct: 149 FIGESSANSLKDEFTYEKGGHIILVPEL-SLPLEYYLIPFLIIVGICLILIVIFMITKFV 207
Query: 116 IRREAPRASRGREFHGMSRRLVKAMPSLIFTAVVEDNCTSRTCAICLEDYSVGEKLRILP 175
+ + + + +K +P F E CAICLE+Y G+KLRILP
Sbjct: 208 ------QDRHRNRRNRLRKDQLKKLPVHKFKKGDE----YDVCAICLEEYEDGDKLRILP 257
Query: 176 CRHKFHAFCVDSWLTSWRTFCPVCKRDARTSTG-----------EPPASESTPLLSSSPA 224
C H +H CVD WLT + CPVCK+ S G E SE TPLL P
Sbjct: 258 CSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSDSDTDSSQEENQVSEHTPLL---PP 314
Query: 225 SSSILSSIRSSLASSSALH 243
S+S + SL+ S + H
Sbjct: 315 SASARTQSFGSLSESHSHH 333
>sp|Q91XF4|RN167_MOUSE E3 ubiquitin-protein ligase RNF167 OS=Mus musculus GN=Rnf167 PE=2
SV=1
Length = 347
Score = 112 bits (279), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 127/261 (48%), Gaps = 46/261 (17%)
Query: 2 SSAFV-LTIRGGCSFEDKVRNAQKAGFEAAIVYDNEDDGVLVAMAGNSAGIK----IHAV 56
S F+ L R C+F+ KV NAQKAG+ AA+V+ N + L+ M NS I+ I +V
Sbjct: 80 GSVFIALLRRFDCNFDLKVLNAQKAGYGAAVVH-NVNSNELLNMVWNSEEIQQQIWIPSV 138
Query: 57 FVSKASGEKLKQ-YAGSTDMEIWIIP--SFENSAWSIMAISFISLLAMSAVLATCFFVR- 112
F+ + S E L+ + + ++P SF + I + LL ++ + T VR
Sbjct: 139 FIGERSAEYLRALFVYEKGARVLLVPDNSFPLGYYLIPFTGIVGLLVLA--MGTVLIVRC 196
Query: 113 -RHRIRREAPRASRGREFHGMSRRLVKAMPSLIFTAVVEDNCTSRTCAICLEDYSVGEKL 171
+HR R + R +++ +K +P+ + E + CAICL++Y G+KL
Sbjct: 197 IQHRKRLQRNR---------LTKEQLKQIPTHDYQKGDEYD----VCAICLDEYEDGDKL 243
Query: 172 RILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTSTG--------------------EPP 211
R+LPC H +H+ CVD WLT R CP+CK+ G + P
Sbjct: 244 RVLPCAHAYHSRCVDPWLTQTRKTCPICKQPVHRGPGDEEQEEETQEQEEGDEGEPRDQP 303
Query: 212 ASESTPLLSSSPASSSILSSI 232
ASE TPLL SSP + S+
Sbjct: 304 ASEWTPLLGSSPTLPTSFGSL 324
>sp|Q5XIL0|RN167_RAT E3 ubiquitin-protein ligase RNF167 OS=Rattus norvegicus GN=Rnf167
PE=2 SV=1
Length = 349
Score = 112 bits (279), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 127/262 (48%), Gaps = 47/262 (17%)
Query: 2 SSAFV-LTIRGGCSFEDKVRNAQKAGFEAAIVYDNEDDGVLVAMAGNSAGIK----IHAV 56
S F+ L R C+F+ KV NAQKAG+ AA+V+ N + L+ M NS I+ I +V
Sbjct: 80 GSVFIALLRRFDCNFDLKVLNAQKAGYGAAVVH-NVNSNELLNMVWNSEEIQQQIWIPSV 138
Query: 57 FVSKASGEKLKQ-YAGSTDMEIWIIP--SFENSAWSIMAISFISLLAMSAVLATCFFVR- 112
F+ + S E L+ + + ++P SF + I + LL ++ + T VR
Sbjct: 139 FIGERSAEYLRALFVYEKGARVLLVPDNSFPLGYYLIPFTGIVGLLVLA--MGTVLIVRC 196
Query: 113 -RHRIRREAPRASRGREFHGMSRRLVKAMPSLIFTAVVEDNCTSRTCAICLEDYSVGEKL 171
+HR R + R +++ +K +P+ + E + CAICL++Y G+KL
Sbjct: 197 IQHRKRLQRNR---------LTKEQLKQIPTHDYQKGDEYD----VCAICLDEYEDGDKL 243
Query: 172 RILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTSTG---------------------EP 210
RILPC H +H+ CVD WLT R CP+CK+ G +
Sbjct: 244 RILPCAHAYHSRCVDPWLTQTRKTCPICKQPVHRGPGDEEQEEETQGQEEEGDEGEPRDQ 303
Query: 211 PASESTPLLSSSPASSSILSSI 232
PASE TPLL SSP + S+
Sbjct: 304 PASEWTPLLGSSPTLPTSFGSL 325
>sp|Q5RCV8|RNF13_PONAB E3 ubiquitin-protein ligase RNF13 OS=Pongo abelii GN=RNF13 PE=2
SV=1
Length = 381
Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 114/235 (48%), Gaps = 29/235 (12%)
Query: 2 SSAFVLTIRG-GCSFEDKVRNAQKAGFEAAIVYDNEDDGVLVAMAGNS----AGIKIHAV 56
S F++ IR C+F+ KV NAQ+AG++AAIV+ N D L++M N I I +V
Sbjct: 90 SGTFIVLIRRLDCNFDIKVLNAQRAGYKAAIVH-NVDSDDLISMGSNDIEVLKKIDIPSV 148
Query: 57 FVSKASGEKLK-QYAGSTDMEIWIIPSFENSAWSIMAISFISLLAMSAVLATCFFVRRHR 115
F+ ++S LK ++ + ++P F + I F+ ++ + +L F + +
Sbjct: 149 FIGESSANSLKDEFTYEKGGHLILVPEF-SLPLEYYLIPFLIIVGICLILIVIFMITKFV 207
Query: 116 IRREAPRASRGREFHGMSRRLVKAMPSLIFTAVVEDNCTSRTCAICLEDYSVGEKLRILP 175
+ + + + +K +P F E CAICL++Y G+KLRILP
Sbjct: 208 ------QDRHRARRNRLRKDQLKKLPVHKFKKGDE----YDVCAICLDEYEDGDKLRILP 257
Query: 176 CRHKFHAFCVDSWLTSWRTFCPVCKRDARTSTG-----------EPPASESTPLL 219
C H +H CVD WLT + CPVCK+ S G E +E TPLL
Sbjct: 258 CSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSDSDTDSSQEENEVTEHTPLL 312
>sp|O43567|RNF13_HUMAN E3 ubiquitin-protein ligase RNF13 OS=Homo sapiens GN=RNF13 PE=1
SV=1
Length = 381
Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 114/235 (48%), Gaps = 29/235 (12%)
Query: 2 SSAFVLTIRG-GCSFEDKVRNAQKAGFEAAIVYDNEDDGVLVAMAGNS----AGIKIHAV 56
S F++ IR C+F+ KV NAQ+AG++AAIV+ N D L++M N I I +V
Sbjct: 90 SGTFIVLIRRLDCNFDIKVLNAQRAGYKAAIVH-NVDSDDLISMGSNDIEVLKKIDIPSV 148
Query: 57 FVSKASGEKLK-QYAGSTDMEIWIIPSFENSAWSIMAISFISLLAMSAVLATCFFVRRHR 115
F+ ++S LK ++ + ++P F + I F+ ++ + +L F + +
Sbjct: 149 FIGESSANSLKDEFTYEKGGHLILVPEF-SLPLEYYLIPFLIIVGICLILIVIFMITKFV 207
Query: 116 IRREAPRASRGREFHGMSRRLVKAMPSLIFTAVVEDNCTSRTCAICLEDYSVGEKLRILP 175
+ + + + +K +P F E CAICL++Y G+KLRILP
Sbjct: 208 ------QDRHRARRNRLRKDQLKKLPVHKFKKGDE----YDVCAICLDEYEDGDKLRILP 257
Query: 176 CRHKFHAFCVDSWLTSWRTFCPVCKRDARTSTG-----------EPPASESTPLL 219
C H +H CVD WLT + CPVCK+ S G E +E TPLL
Sbjct: 258 CSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSDSDTDSSQEENEVTEHTPLL 312
>sp|Q06003|GOLI_DROME Protein goliath OS=Drosophila melanogaster GN=gol PE=2 SV=3
Length = 461
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 105/227 (46%), Gaps = 13/227 (5%)
Query: 7 LTIRGGCSFEDKVRNAQKAGFEAAIVYDNEDDGVLVAMAGNSAGIKIHAVFVSKASGEKL 66
L RG C+FE+KV++ + I+Y+++ L M I AV + G+ L
Sbjct: 144 LVRRGRCTFEEKVKHVYQQNAAGVIIYNDKQVMQLEKMQIKGKTRNIAAVITYQNIGQDL 203
Query: 67 -----KQYAGSTDM-----EIWIIPSFENSAWSIMAISFISLLAMSAVLATCFFVRRHRI 116
K Y + + + I S ++ ++ISFI L+ +S V ++++R R
Sbjct: 204 SLTLDKGYNVTISIIEGRRGVRTISSLNRTSVLFVSISFIVLMIISLVWLIFYYIQRFRY 263
Query: 117 RREAPRASRGREFHGMSRRLVKAMPSLIFTAVVEDNCTSRTCAICLEDYSVGEKLRILPC 176
+ + SR ++++ + +P+ E + S CAIC+E Y + +RILPC
Sbjct: 264 MQAKDQQSRN--LCSVTKKAIMKIPTKTGKFSDEKDLDSDCCAICIEAYKPTDTIRILPC 321
Query: 177 RHKFHAFCVDSWLTSWRTFCPVCKRDARTSTGEPPASESTPLLSSSP 223
+H+FH C+D WL RT CP+CK D G +L P
Sbjct: 322 KHEFHKNCIDPWLIEHRT-CPMCKLDVLKFYGYVFLGSEESILEYQP 367
>sp|Q4R6Y5|ZNRF4_MACFA Zinc/RING finger protein 4 OS=Macaca fascicularis GN=ZNRF4 PE=2
SV=1
Length = 429
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 107/211 (50%), Gaps = 25/211 (11%)
Query: 3 SAFVLTIRGGCSFEDKVRNAQKAGFEAAIVYDNEDDGVLVAMAGNSAGIK----IHAVFV 58
A L R C+F+ KV NAQ+AGFEAAIV++ D LV+M S ++ I +VFV
Sbjct: 156 GAIALIRRYDCTFDLKVLNAQRAGFEAAIVHNVHSDD-LVSMTHVSEDLRGQIAIPSVFV 214
Query: 59 SKASGEKLKQYAG-STDMEIWIIPS----FENSAWSIMAISFISLLAMSAVLATCFFVRR 113
+A+ + L+ G + ++P + ++ +S+ ++ V++T F + R
Sbjct: 215 GEAASQDLRVILGCDKSAHVLLLPDDPPCRDLDCHPVLTVSWALGRTLALVVSTLFVLNR 274
Query: 114 HRIRREAPRASRGREFHGMSRRLVKAMPSLIFTAVVEDNCTSRT--CAICLEDYSVGEKL 171
+ +A RRLVK S A V T R CAICL++Y G++L
Sbjct: 275 LWLWAQA---------CCSHRRLVKT--STCQKAQVR-TFTRRNDLCAICLDEYEEGDQL 322
Query: 172 RILPCRHKFHAFCVDSWLTSW-RTFCPVCKR 201
+ILPC H +H C+D W + R CPVCK+
Sbjct: 323 KILPCSHTYHCKCIDPWFSQAPRRSCPVCKQ 353
>sp|Q3U2C5|RN149_MOUSE E3 ubiquitin-protein ligase RNF149 OS=Mus musculus GN=Rnf149 PE=2
SV=3
Length = 394
Score = 92.8 bits (229), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 112/244 (45%), Gaps = 36/244 (14%)
Query: 7 LTIRGGCSFEDKVRNAQKAGFEAAIVYDNEDDG-------------VLVAMAGNSAGIKI 53
L RGGC+F+DKV A + A +VY+ E +G ++V M G +I
Sbjct: 108 LVARGGCTFKDKVLAAARRNASAVVVYNLESNGNATEPMSHAGTGNIVVIMISYPKGREI 167
Query: 54 HAVFVSKASGEKLKQYAGSTDMEIWIIPSFENSAWSIMAISFISLLAMSAVLATCFFVRR 113
V K K++ G+ M+ +I + +AI+FI+++ +S ++++R
Sbjct: 168 FD-LVQKGIPVKMRIEIGTRHMQEFI----SGQSVVFVAIAFITMMIISLAWLIFYYIQR 222
Query: 114 HRIRREAPRASRGREFHGMSRR--LVKAMPSLIFTAVVED----NCTSRTCAICLEDYSV 167
G +F + R K + L V + + CA+C+E++ V
Sbjct: 223 F--------LYTGSQFGSQNHRKETKKVIGQLPLHTVKHGEKGIDVDAENCAVCIENFKV 274
Query: 168 GEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRD---ARTSTGEPPASESTPLLSSSPA 224
+ +RILPC+H FH C+D WL RT CP+CK D A G+P ++ P ++P
Sbjct: 275 KDVIRILPCKHIFHRICIDPWLLDHRT-CPMCKLDVIKALGYWGDPEDTQELPTPEAAPG 333
Query: 225 SSSI 228
S+
Sbjct: 334 RVSV 337
>sp|Q8WWF5|ZNRF4_HUMAN Zinc/RING finger protein 4 OS=Homo sapiens GN=ZNRF4 PE=2 SV=3
Length = 429
Score = 92.0 bits (227), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 103/210 (49%), Gaps = 23/210 (10%)
Query: 3 SAFVLTIRGGCSFEDKVRNAQKAGFEAAIVYDNEDDGVLVAMA----GNSAGIKIHAVFV 58
A VL R C+F+ KV NAQ+AGFEAAIV++ D LV+M I I +VFV
Sbjct: 156 GAIVLIRRYDCTFDLKVLNAQRAGFEAAIVHNVHSDD-LVSMTHVYEDLRGQIAIPSVFV 214
Query: 59 SKASGEKLKQYAGSTDMEIWII-----PSFENSAWSIMAISFISLLAMSAVLATCFFVRR 113
S+A+ + L+ G ++ P + ++ +S++ L A++ + FFV
Sbjct: 215 SEAASQDLRVILGCNKSAHALLLPDDPPCHDLGCHPVLTVSWV-LGCTLALVVSAFFVLN 273
Query: 114 HRIRREAPRASRGREFHGMSRRLVKAMPSLIFTAVVED-NCTSRTCAICLEDYSVGEKLR 172
H S RR VK S A V + CAICL++Y G++L+
Sbjct: 274 HLWLWAQACCSH--------RRPVKT--STCQKAQVRTFTWHNDLCAICLDEYEEGDQLK 323
Query: 173 ILPCRHKFHAFCVDSWLTSW-RTFCPVCKR 201
ILPC H +H C+D W + R CPVCK+
Sbjct: 324 ILPCSHTYHCKCIDPWFSQAPRRSCPVCKQ 353
>sp|Q9ULK6|RN150_HUMAN RING finger protein 150 OS=Homo sapiens GN=RNF150 PE=2 SV=2
Length = 438
Score = 89.7 bits (221), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 126/278 (45%), Gaps = 27/278 (9%)
Query: 10 RGGCSFEDKVRNAQKAGFEAAIVYD---NEDDGVLVAMAGNSAGIKIHAVFVSKASGEKL 66
+G C++ DK+RNA A ++++ N ++ + + AG I A+ + + G+++
Sbjct: 123 KGNCTYRDKIRNAFLQNASAVVIFNVGSNTNETITMPHAGVE---DIVAIMIPEPKGKEI 179
Query: 67 KQYAG-STDMEIWIIPSFEN-------SAWSIMAISFISLLAMSAVLATCFFVRRHRIRR 118
+ + ++I N ++ ++ISFI L+ +S ++++R R
Sbjct: 180 VSLLERNITVTMYITIGTRNLQKYVSRTSVVFVSISFIVLMIISLAWLVFYYIQRFRYAN 239
Query: 119 EAPRASRGREFHGMSRRLVKAMPSLIFTAVVEDNCTSRTCAICLEDYSVGEKLRILPCRH 178
R R R + + K I E CA+C+E Y + +RILPCRH
Sbjct: 240 ARDRNQR-RLGDAAKKAISKLQIRTIKKGDKETESDFDNCAVCIEGYKPNDVVRILPCRH 298
Query: 179 KFHAFCVDSWLTSWRTFCPVCKRDARTSTGEPPASESTPLLSSS-------PASSSILSS 231
FH CVD WL RT CP+CK + + G PP ++ L + P ++ I +
Sbjct: 299 LFHKSCVDPWLLDHRT-CPMCKMNILKALGIPPNADCMDDLPTDFEGSLGGPPTNQITGA 357
Query: 232 IRSSLASSSALHIPPSMSHSPSVSHIHSVASTPYIPQS 269
+++ SS + + P++ +V + V T IPQ
Sbjct: 358 SDTTVNESS-VTLDPAVR---TVGALQVVQDTDPIPQE 391
>sp|Q5DTZ6|RN150_MOUSE RING finger protein 150 OS=Mus musculus GN=Rnf150 PE=2 SV=2
Length = 437
Score = 88.6 bits (218), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 101/216 (46%), Gaps = 16/216 (7%)
Query: 10 RGGCSFEDKVRNAQKAGFEAAIVYD---NEDDGVLVAMAGNSAGIKIHAVFVSKASGEKL 66
+G C++ DK+RNA A ++++ N ++ + + AG I A+ + + G+++
Sbjct: 122 KGNCTYRDKIRNAFLQNASAVVIFNVGSNTNETITMPHAGVE---DIVAIMIPEPKGKEI 178
Query: 67 KQYAG-STDMEIWIIPSFEN-------SAWSIMAISFISLLAMSAVLATCFFVRRHRIRR 118
+ + ++I N ++ ++ISFI L+ +S ++++R R
Sbjct: 179 VSLLERNITVTMYITIGTRNLQKYVSRTSVVFVSISFIVLMIISLAWLVFYYIQRFRYAN 238
Query: 119 EAPRASRGREFHGMSRRLVKAMPSLIFTAVVEDNCTSRTCAICLEDYSVGEKLRILPCRH 178
R R R + + K I E CA+C+E Y + +RILPCRH
Sbjct: 239 ARDRNQR-RLGDAAKKAISKLQVRTIRKGDKETESDFDNCAVCIEGYKPNDVVRILPCRH 297
Query: 179 KFHAFCVDSWLTSWRTFCPVCKRDARTSTGEPPASE 214
FH CVD WL RT CP+CK + + G PP ++
Sbjct: 298 LFHKSCVDPWLLDHRT-CPMCKMNILKALGIPPNAD 332
>sp|Q8NC42|RN149_HUMAN E3 ubiquitin-protein ligase RNF149 OS=Homo sapiens GN=RNF149 PE=2
SV=2
Length = 400
Score = 88.2 bits (217), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 106/233 (45%), Gaps = 22/233 (9%)
Query: 7 LTIRGGCSFEDKVRNAQKAGFEAAIVYDNEDDGVLVAMAGNSAGIKIHAVFVSKASGEK- 65
L RGGC+F+DKV A + A ++Y+ E G + ++ I + +S G +
Sbjct: 112 LVARGGCTFKDKVLVAARRNASAVVLYNEERYGNITLPMSHAGTGNIVVIMISYPKGREI 171
Query: 66 --LKQYAGSTDMEIWI----IPSF-ENSAWSIMAISFISLLAMSAVLATCFFVRRHRIRR 118
L Q M I + + F + +AI+FI+++ +S ++++R
Sbjct: 172 LELVQKGIPVTMTIGVGTRHVQEFISGQSVVFVAIAFITMMIISLAWLIFYYIQRFLYTG 231
Query: 119 EAPRASRGREFHGMSRRLVKAMPSLIFTAVVED----NCTSRTCAICLEDYSVGEKLRIL 174
+ G + H + K + L+ V + + CA+C+E++ V + +RIL
Sbjct: 232 ----SQIGSQSH--RKETKKVIGQLLLHTVKHGEKGIDVDAENCAVCIENFKVKDIIRIL 285
Query: 175 PCRHKFHAFCVDSWLTSWRTFCPVCKRD---ARTSTGEPPASESTPLLSSSPA 224
PC+H FH C+D WL RT CP+CK D A GEP + P S P
Sbjct: 286 PCKHIFHRICIDPWLLDHRT-CPMCKLDVIKALGYWGEPGDVQEMPAPESPPG 337
>sp|Q6NRX0|RN149_XENLA E3 ubiquitin-protein ligase RNF149 OS=Xenopus laevis GN=rnf149 PE=2
SV=1
Length = 397
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 102/225 (45%), Gaps = 41/225 (18%)
Query: 7 LTIRGGCSFEDKVRNAQKAGFEAAIVYDNEDDG-VLVAMAGNSAGIKIHAVFVSKASGEK 65
L RGGC+F++KV NA G A ++Y+ G V+M+ G + + VS G +
Sbjct: 107 LVARGGCTFKEKVFNAANRGASAVVIYNEAKSGNATVSMSHLGTGNTV-VIMVSYPKGME 165
Query: 66 LKQ------------YAGSTDMEIWIIPSFENSAWSIMAISFISLLAMSAVLATCFFVRR 113
+ + G+ ++ +I + +AI+FI+++ +S ++++R
Sbjct: 166 IMEPLRRDIPVKMVITVGTRHVQEFI----SGQSVVFVAIAFITMMIISLAWLIFYYIQR 221
Query: 114 ----------HRIRREAPRASRGREFHGMSRRLVKAMPSLIFTAVVEDNCTSRTCAICLE 163
R+E +A + H R+ K + A CA+C+E
Sbjct: 222 FLYTGAQCGNQSNRKETKKAISQLQLH----RVKKGEKGIDIDA--------ENCAVCIE 269
Query: 164 DYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTSTG 208
+Y + +RILPC+H FH C+D WL RT CP+CK D + G
Sbjct: 270 NYKTKDLVRILPCKHIFHRLCIDPWLIEHRT-CPMCKLDVIKALG 313
>sp|Q86XS8|GOLI_HUMAN E3 ubiquitin-protein ligase RNF130 OS=Homo sapiens GN=RNF130 PE=1
SV=1
Length = 419
Score = 85.1 bits (209), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 100/213 (46%), Gaps = 11/213 (5%)
Query: 7 LTIRGGCSFEDKVRNAQKAGFEAAIVYDNEDDGVLVAMAGNSAGIKIHAVFVSKASGEKL 66
L RG C+F++K+ A A ++Y+N+ V M G I AV +++ G+ +
Sbjct: 107 LLQRGNCTFKEKISRAAFHNAVAVVIYNNKSKEEPVTMTHPGTG-DIIAVMITELRGKDI 165
Query: 67 KQYAG---STDMEIWI---IP--SFENSAWSIMAISFISLLAMSAVLATCFFVRRHRIRR 118
Y S M I + +P +F + ++ISFI L+ +S+ +F+++ R
Sbjct: 166 LSYLEKNISVQMTIAVGTRMPPKNFSRGSLVFVSISFIVLMIISSAWLIFYFIQKIRYTN 225
Query: 119 EAPRASRGREFHGMSRRLVKAMPSLIFTAVVEDNCTSRTCAICLEDYSVGEKLRILPCRH 178
R R R + + K + E + CA+C+E Y + +RILPC+H
Sbjct: 226 ARDRNQR-RLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILPCKH 284
Query: 179 KFHAFCVDSWLTSWRTFCPVCKRDARTSTGEPP 211
FH CVD WL+ T CP+CK + + G P
Sbjct: 285 VFHKSCVDPWLSEHCT-CPMCKLNILKALGIVP 316
>sp|Q6Y290|GOLI_RAT E3 ubiquitin-protein ligase RNF130 OS=Rattus norvegicus GN=Rnf130
PE=1 SV=1
Length = 419
Score = 84.7 bits (208), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 100/213 (46%), Gaps = 11/213 (5%)
Query: 7 LTIRGGCSFEDKVRNAQKAGFEAAIVYDNEDDGVLVAMAGNSAGIKIHAVFVSKASGEKL 66
L RG C+F++K+ A A ++Y+N+ V M G I AV +++ G+ +
Sbjct: 107 LLQRGNCTFKEKISRAAFHNAVAVVIYNNKSKEEPVTMTHPGTG-DIIAVMITELRGKDI 165
Query: 67 KQYAG---STDMEIWI---IP--SFENSAWSIMAISFISLLAMSAVLATCFFVRRHRIRR 118
Y S M I + +P +F + ++ISFI L+ +S+ +F+++ R
Sbjct: 166 LSYLEKNISVQMTIAVGTRMPPKNFSRGSLVFVSISFIVLMIISSAWLIFYFIQKIRYTN 225
Query: 119 EAPRASRGREFHGMSRRLVKAMPSLIFTAVVEDNCTSRTCAICLEDYSVGEKLRILPCRH 178
R R R + + K + E + CA+C+E Y + +R+LPC+H
Sbjct: 226 ARDRNQR-RLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRVLPCKH 284
Query: 179 KFHAFCVDSWLTSWRTFCPVCKRDARTSTGEPP 211
FH CVD WL+ T CP+CK + + G P
Sbjct: 285 VFHKSCVDPWLSEHCT-CPMCKLNILKALGIVP 316
>sp|Q8VEM1|GOLI_MOUSE E3 ubiquitin-protein ligase RNF130 OS=Mus musculus GN=Rnf130 PE=2
SV=1
Length = 419
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 100/213 (46%), Gaps = 11/213 (5%)
Query: 7 LTIRGGCSFEDKVRNAQKAGFEAAIVYDNEDDGVLVAMAGNSAGIKIHAVFVSKASGEKL 66
L RG C+F++K+ A A ++Y+N+ V M G I AV +++ G+ +
Sbjct: 107 LLQRGNCTFKEKISRAAFHNAVAVVIYNNKSKEEPVTMTHPGTG-DIIAVMITELRGKDI 165
Query: 67 KQYAG---STDMEIWI---IP--SFENSAWSIMAISFISLLAMSAVLATCFFVRRHRIRR 118
Y S M I + +P +F + ++ISFI L+ +S+ +F+++ R
Sbjct: 166 LSYLEKNISVQMTIAVGTRMPPKNFSRGSLVFVSISFIVLMIISSAWLIFYFIQKIRYTN 225
Query: 119 EAPRASRGREFHGMSRRLVKAMPSLIFTAVVEDNCTSRTCAICLEDYSVGEKLRILPCRH 178
R R R + + K + E + CA+C+E Y + +R+LPC+H
Sbjct: 226 ARDRNQR-RLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRVLPCKH 284
Query: 179 KFHAFCVDSWLTSWRTFCPVCKRDARTSTGEPP 211
FH CVD WL+ T CP+CK + + G P
Sbjct: 285 VFHKSCVDPWLSEHCT-CPMCKLNILKALGIVP 316
>sp|Q14B02|RN133_MOUSE E3 ubiquitin-protein ligase RNF133 OS=Mus musculus GN=Rnf133 PE=1
SV=1
Length = 382
Score = 82.0 bits (201), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 117/274 (42%), Gaps = 44/274 (16%)
Query: 7 LTIRGGCSFEDKVRNAQKAGFEAAIVYDNEDDG-------------VLVAMAGNSAGIKI 53
L RGGC+F K++ A + G I+Y+ G ++V M GN G++I
Sbjct: 104 LIERGGCAFTQKIKVASEHGARGVIIYNFPGTGNQVFPMSHQAFEDIVVVMIGNIKGMEI 163
Query: 54 HAVFVSKASGEKLKQYAGSTDMEIWIIPSFENSAWSIMAISFISLLAMSAVLATCFFVRR 113
+ + K + G + IW+ F +SF+ + + T + +RR
Sbjct: 164 LHL-IRKGVHVTVMVEVGRKHV-IWLNHYF---------VSFMIVTTATLAYFTFYHIRR 212
Query: 114 HRIRREAPRASRGREFHGMSRRLVKAMPSLIFTAVVED----NCTSRTCAICLEDYSVGE 169
+ R R + ++R L KA L + E N + +C IC E Y E
Sbjct: 213 LWVAR-----IENRRWKRLTRELKKAFGQLQVRVLKEGDEEVNPNADSCVICFEAYKPNE 267
Query: 170 KLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTSTG----EPPASESTPLLSSSPAS 225
+RIL C+H FH C+D W+ + T CP+CK D + G ++S +L S+
Sbjct: 268 IVRILTCKHFFHKNCIDPWILAHGT-CPMCKCDILKALGIQMDIEDGTDSLQVLMSNELP 326
Query: 226 SSILSSIRSSLASSSALHIPPSMSHSPSVSHIHS 259
++ S + + +PP+ + S V+H+
Sbjct: 327 GTL-----SPVEEETNYELPPART-SSKVTHVQE 354
>sp|Q566M8|RN150_DANRE RING finger protein 150 OS=Danio rerio GN=rnf150 PE=2 SV=1
Length = 419
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 102/224 (45%), Gaps = 25/224 (11%)
Query: 7 LTIRGGCSFEDKVRNAQKAGFEAAIVYD----NEDDGVLVAMAGNSAGIKIHAVFVSKAS 62
L RG C+++DK+R+A A ++++ N ++ + + G S + A+ + +
Sbjct: 108 LISRGNCTYKDKIRHAVGHNASAVVIFNVGSSNPNETITMPHQGIS---DVVAIMIPEPK 164
Query: 63 GEKLKQYA------------GSTDMEIWIIPSFENSAWSIMAISFISLLAMSAVLATCFF 110
G +L G+ +++ ++ ++ ++ISFI L+ +S ++
Sbjct: 165 GRELVLLMERNITVHMHITIGTRNLQKYV----SRTSVVFVSISFIILMIISLAWLVFYY 220
Query: 111 VRRHRIRREAPRASRGREFHGMSRRLVKAMPSLIFTAVVEDNCTSRTCAICLEDYSVGEK 170
++R R R R R + + + I E CA+C+E Y +
Sbjct: 221 IQRFRYANARDRNQR-RLGDAAKKAISQLQVRTIRKGDQETESDFDNCAVCIEGYKPNDV 279
Query: 171 LRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTSTGEPPASE 214
+RILPCRH FH CVD WL RT CP+CK + + G ++E
Sbjct: 280 VRILPCRHLFHKCCVDPWLVDHRT-CPMCKMNILKALGLTSSAE 322
>sp|Q6AY01|RN133_RAT E3 ubiquitin-protein ligase RNF133 OS=Rattus norvegicus GN=Rnf133
PE=2 SV=1
Length = 381
Score = 79.0 bits (193), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 118/274 (43%), Gaps = 44/274 (16%)
Query: 7 LTIRGGCSFEDKVRNAQKAGFEAAIVYDNEDDG-------------VLVAMAGNSAGIKI 53
L RGGC+F K++ A + G I+Y+ G ++V M GN G++I
Sbjct: 104 LIERGGCAFTQKIKVASENGARGVIIYNFPGTGNQVFPMSHQAFEDIVVVMIGNVKGMEI 163
Query: 54 HAVFVSKASGEKLKQYAGSTDMEIWIIPSFENSAWSIMAISFISLLAMSAVLATCFFVRR 113
+ + K + G + IW+ F +SF+ + + T + +RR
Sbjct: 164 LHL-IRKGVHVTVMVEVGRKHV-IWLNHYF---------VSFMIVTTATLAYFTFYHIRR 212
Query: 114 HRIRREAPRASRGREFHGMSRRLVKAMPSLIFTAVVEDNC----TSRTCAICLEDYSVGE 169
+ R R + ++R L KA L + E + + +C IC E Y E
Sbjct: 213 LWVAR-----IEDRRWKRLTRELKKAFGQLQVRILKEGDEEVSPNADSCVICFEAYKPNE 267
Query: 170 KLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTSTG----EPPASESTPLLSSSPAS 225
+RIL C+H FH C+D W+ + T CP+CK D + G S+S +L S+
Sbjct: 268 IVRILTCKHFFHKNCIDPWILAHGT-CPMCKCDILKALGIQMDIEDGSDSLQVLMSNELP 326
Query: 226 SSILSSIRSSLASSSALHIPPSMSHSPSVSHIHS 259
+ S++ L + +PP+ + S V+H+
Sbjct: 327 GT-FSAMEEELNNE----LPPART-SSKVTHVQE 354
>sp|Q8AWW4|RN128_XENLA E3 ubiquitin-protein ligase RNF128 OS=Xenopus laevis GN=rnf128 PE=2
SV=2
Length = 404
Score = 78.2 bits (191), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 106/253 (41%), Gaps = 21/253 (8%)
Query: 11 GGCSFEDKVRNAQKAGFEAAIVYDNEDDGVLVAMAGNSAGIKIHAVFVSKASGEKLKQYA 70
GGC+F +K+ A + G A +VY+N D + M+ + + + E +
Sbjct: 108 GGCTFTEKINRAAERGARAVVVYNNGIDNEVFEMSHPGTKDTVAIMIGNLKGNEIVDLIK 167
Query: 71 GSTDMEIWIIPSFENSAW----SIMAISFISLLAMSAVLATCFFVRRHRIRREAPRASRG 126
G + + I ++ +W SI +S + +A + F R R + +
Sbjct: 168 GGMQVTMVIEVGRKHGSWINHYSIFFVSVSFFIVTAATVGYFIFYSARRWRLTRAQNKKQ 227
Query: 127 REFHGMSRRLVKAMPSLIFTAVVEDNCT----SRTCAICLEDYSVGEKLRILPCRHKFHA 182
+ ++ KA+ L + + + +CA+C+E Y + +RIL C H FH
Sbjct: 228 KRLKAEAK---KAIGKLQLRTIKQGDKVLGPDGDSCAVCIEPYKPSDVVRILTCNHFFHK 284
Query: 183 FCVDSWLTSWRTFCPVCKRDARTSTGEPPASESTPLLSSSPASSSILSSIRSSLASSSAL 242
C+D WL RT CP+CK D S G E +S + S+ S L S+ +
Sbjct: 285 NCIDPWLLEHRT-CPMCKCDILKSLGIAEDEEE--------GTSVAIPSVSSELQRST-V 334
Query: 243 HIPPSMSHSPSVS 255
I +HS + S
Sbjct: 335 QITEEENHSETAS 347
>sp|Q8TEB7|RN128_HUMAN E3 ubiquitin-protein ligase RNF128 OS=Homo sapiens GN=RNF128 PE=1
SV=1
Length = 428
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 97/227 (42%), Gaps = 7/227 (3%)
Query: 11 GGCSFEDKVRNAQKAGFEAAIVYDNEDDGVLVAMAGNSAGIKIHAVFVSKASGEKLKQ-Y 69
GGC+F DK+ A + G A++++ V + + I A+ + G K+ Q
Sbjct: 124 GGCTFADKIHLAYERGASGAVIFNFPGTRNEVIPMSHPGAVDIVAIMIGNLKGTKILQSI 183
Query: 70 AGSTDMEIWIIPSFENSAW----SIMAISFISLLAMSAVLATCFFVRRHRIRREAPRASR 125
+ + I ++ W SI +S + +A + F R+R ++ +
Sbjct: 184 QRGIQVTMVIEVGKKHGPWVNHYSIFFVSVSFFIITAATVGYFIFYSARRLRNARAQSRK 243
Query: 126 GREFHGMSRRLVKAMP-SLIFTAVVEDNCTSRTCAICLEDYSVGEKLRILPCRHKFHAFC 184
R+ +++ + + + E +CA+C+E Y + +RIL C H FH C
Sbjct: 244 QRQLKADAKKAIGRLQLRTLKQGDKEIGPDGDSCAVCIELYKPNDLVRILTCNHIFHKTC 303
Query: 185 VDSWLTSWRTFCPVCKRDARTSTGEPPASESTPLLSSSPASSSILSS 231
VD WL RT CP+CK D + G E + P S+ I +S
Sbjct: 304 VDPWLLEHRT-CPMCKCDILKALGIEVDVEDGSVSLQVPVSNEISNS 349
>sp|Q9D304|RN128_MOUSE E3 ubiquitin-protein ligase RNF128 OS=Mus musculus GN=Rnf128 PE=1
SV=1
Length = 428
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 17/209 (8%)
Query: 11 GGCSFEDKVRNAQKAGFEAAIVYD-----NEDDGVLVAMAGNSAGIKIHAVFVSKASGEK 65
GGC+F DK+ A + G A++++ NE ++ M+ AG I A+ + G K
Sbjct: 124 GGCTFADKIHLASERGASGAVIFNFPGTRNE----VIPMSHPGAG-DIVAIMIGNLKGTK 178
Query: 66 LKQ-YAGSTDMEIWIIPSFENSAW----SIMAISFISLLAMSAVLATCFFVRRHRIRREA 120
+ Q + + I ++ W SI +S + +A + F R+R
Sbjct: 179 ILQSIQRGIQVTMVIEVGKKHGPWVNHYSIFFVSVSFFIITAATVGYFIFYSARRLRNAR 238
Query: 121 PRASRGREFHGMSRRLV-KAMPSLIFTAVVEDNCTSRTCAICLEDYSVGEKLRILPCRHK 179
++ + R+ +++ + K + E +CA+C+E Y + +RIL C H
Sbjct: 239 AQSRKQRQLKADAKKAIGKLQLRTLKQGDKEIGPDGDSCAVCIELYKPNDLVRILTCNHI 298
Query: 180 FHAFCVDSWLTSWRTFCPVCKRDARTSTG 208
FH CVD WL RT CP+CK D + G
Sbjct: 299 FHKTCVDPWLLEHRT-CPMCKCDILKALG 326
>sp|Q5RF74|RN128_PONAB E3 ubiquitin-protein ligase RNF128 OS=Pongo abelii GN=RNF128 PE=2
SV=1
Length = 428
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 102/232 (43%), Gaps = 17/232 (7%)
Query: 11 GGCSFEDKVRNAQKAGFEAAIVYD-----NEDDGVLVAMAGNSAGIKIHAVFVSKASGEK 65
GGC+F DK+ A + G A++++ NE ++ M+ AG I A+ + G K
Sbjct: 124 GGCTFADKIHLAYERGASGAVIFNFPGTRNE----VIPMSHPGAG-DIVAIMIGNLKGTK 178
Query: 66 LKQ-YAGSTDMEIWIIPSFENSAW----SIMAISFISLLAMSAVLATCFFVRRHRIRREA 120
+ Q + + I ++ W SI +S + +A + F R+R
Sbjct: 179 ILQSIQRGIQVTMVIEVGKKHGPWVNHYSIFFVSVSFFIITAATVGYFIFYSARRLRNAR 238
Query: 121 PRASRGREFHGMSRRLVKAMP-SLIFTAVVEDNCTSRTCAICLEDYSVGEKLRILPCRHK 179
++ + R+ +++ + + + E +CA+C+E Y + +RIL C H
Sbjct: 239 AQSRKQRQLKADAKKAIGRLQLRTLKQGDREIGPDGDSCAVCIELYKPNDLVRILTCNHI 298
Query: 180 FHAFCVDSWLTSWRTFCPVCKRDARTSTGEPPASESTPLLSSSPASSSILSS 231
FH CVD WL RT CP+CK D + G E + P S+ I +S
Sbjct: 299 FHKTCVDPWLLEHRT-CPMCKCDILKALGIEVDVEDGSVSLQVPVSNEISNS 349
>sp|Q95K04|RN133_MACFA E3 ubiquitin-protein ligase RNF133 OS=Macaca fascicularis GN=RNF133
PE=2 SV=1
Length = 376
Score = 75.5 bits (184), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 113/284 (39%), Gaps = 45/284 (15%)
Query: 7 LTIRGGCSFEDKVRNAQKAGFEAAIVYDNEDDG-------------VLVAMAGNSAGIKI 53
L RGGC+F K++ A + G I+Y+ G V+V M GN G +I
Sbjct: 104 LIERGGCTFTQKIKVAAEKGASGVIIYNFPGTGNQVFPMFHQAFEDVVVVMIGNLKGTEI 163
Query: 54 HAVFVSKASGEKLKQYAGSTDMEIWIIPSFENSAWSIMAISFISLLAMSAVLATCFFVRR 113
+ + K G + IW+ + +SF+ + +A LA F
Sbjct: 164 FHL-IKKGVLITAMVEVGRKHI-IWM---------NHYLVSFV--IVTTATLAYFIFYHI 210
Query: 114 HRIRREAPRASRGREFHGMSRRLVKAMPSLIFTAVVED----NCTSRTCAICLEDYSVGE 169
HR+ + R + ++ L A L V E N +C IC E Y +
Sbjct: 211 HRL---CLARIQNRRWQRLTTDLQNAFGQLQLRVVKEGDEEINPNGDSCVICFEHYKPND 267
Query: 170 KLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTSTGEPPASESTP-----LLSS--- 221
+RIL C+H FH C+D W+ S T CP+CK D G E+ L+SS
Sbjct: 268 IVRILTCKHFFHKNCIDPWILSHGT-CPICKCDILKVLGIQVDVENGTEPLQVLMSSELC 326
Query: 222 ---SPASSSILSSIRSSLASSSALHIPPSMSHSPSVSHIHSVAS 262
SP+ + + + S +H+ + + + S HSV
Sbjct: 327 ETLSPSEEETNNEVSPAGTSDKVIHVEENPTSQNNDSQPHSVVE 370
>sp|P87139|YDM9_SCHPO Uncharacterized RING finger protein C57A7.09 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC57A7.09 PE=1 SV=1
Length = 372
Score = 75.5 bits (184), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 102/225 (45%), Gaps = 28/225 (12%)
Query: 5 FVLTIRGGCSFEDKVRNAQKAGFEAAIVYDNEDDG------VLVAMAGNSAGIKIHAVFV 58
F+L RG C++ DK AQ+ GF+ IV DN ++ + + + I ++FV
Sbjct: 144 FLLVQRGKCTYFDKALEAQRLGFKGVIVGDNRSPSSFRLHYMVAPDKVDESKVHIPSLFV 203
Query: 59 SKAS------------GEKLKQYAGSTDMEIWIIPSFENSAWSIMAISFISLLAMSAVLA 106
S +S + LK YA ++ P + SI+ + + LA+ +
Sbjct: 204 STSSYNLLWSDLLHSYRQPLKLYAKPEELGDMFWPFLLCFSPSIIMLITVQALAIRKFIR 263
Query: 107 TCFFVRRHRIRR---EAPRASRGRE-FHGMSRRLVKAMPSLIFTAVVEDNCTSRT----C 158
T + + + RR + P + RE F+ + + + +++++ T C
Sbjct: 264 T--YRTKSKTRRFIEDLPSRTISREGFYSEEEEIENSTQNGELVPLMDESTRRATFGVEC 321
Query: 159 AICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDA 203
ICLE ++ G+K+ LPC+H+FH C+ W+ +R CP C +
Sbjct: 322 VICLESFTKGDKVVALPCKHEFHRPCIAKWIVDYRHACPTCNTEV 366
>sp|Q8N7C7|RN148_HUMAN RING finger protein 148 OS=Homo sapiens GN=RNF148 PE=2 SV=2
Length = 305
Score = 75.1 bits (183), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 87/207 (42%), Gaps = 10/207 (4%)
Query: 2 SSAFVLTIRGGCSFEDKVRNAQKAGFEAAIVYDNEDDGVLVAMAGNSAGIKIHAVFVSKA 61
S L RGGC+F K+ A + G I+Y+ + G V + I AV +S
Sbjct: 99 DSWLALIERGGCTFTHKINVAAEKGANGVIIYNYQGTGSKVFPMSHQGTENIVAVMISNL 158
Query: 62 SGEKLKQYAGSTDMEIWIIPSFENSAWSIMAISFISLLAMSAVLATCFFVRRHRIRREAP 121
G ++ S +++ E + +S + + + AT + + R P
Sbjct: 159 KGMEILH---SIQKGVYVTVIIEVGRMHMQWVSHYIMYLFTFLAATIAYFYLDCVWRLTP 215
Query: 122 RA--SRGREFHGMSRRLVKAMPSLIFTAVVEDN----CTSRTCAICLEDYSVGEKLRILP 175
R S R + + KA+ L + E + C +C + Y + +RIL
Sbjct: 216 RVPNSFTRRRSQIKTDVKKAIDQLQLRVLKEGDEELDLNEDNCVVCFDTYKPQDVVRILT 275
Query: 176 CRHKFHAFCVDSWLTSWRTFCPVCKRD 202
C+H FH C+D WL + RT CP+CK D
Sbjct: 276 CKHFFHKACIDPWLLAHRT-CPMCKCD 301
>sp|Q29RU0|RN128_BOVIN E3 ubiquitin-protein ligase RNF128 OS=Bos taurus GN=RNF128 PE=2
SV=1
Length = 431
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 17/209 (8%)
Query: 11 GGCSFEDKVRNAQKAGFEAAIVYD-----NEDDGVLVAMAGNSAGIKIHAVFVSKASGEK 65
GGC+F DK+ A + G A++++ NE ++ M+ AG I A+ + G K
Sbjct: 127 GGCTFADKIHLAYERGASGAVIFNFPGTRNE----VIPMSHPGAG-DIVAIMIGNLKGTK 181
Query: 66 LKQ-YAGSTDMEIWIIPSFENSAW----SIMAISFISLLAMSAVLATCFFVRRHRIRREA 120
+ Q + + I ++ W SI +S + +A + F R+R
Sbjct: 182 ILQSIQRGIQVTMVIEVGKKHGPWVNHYSIFFVSVSFFIITAATVGYFIFYSARRLRNAR 241
Query: 121 PRASRGREFHGMSRRLVKAMP-SLIFTAVVEDNCTSRTCAICLEDYSVGEKLRILPCRHK 179
++ + R+ +++ + + E +CA+C+E Y + +RIL C H
Sbjct: 242 AQSRKQRQLKADAKKAIGRLQLRTQKQGDKEIGPDGDSCAVCIELYKPNDLVRILTCNHV 301
Query: 180 FHAFCVDSWLTSWRTFCPVCKRDARTSTG 208
FH CVD WL RT CP+CK D + G
Sbjct: 302 FHKTCVDPWLLEHRT-CPMCKCDILKALG 329
>sp|Q8WVZ7|RN133_HUMAN E3 ubiquitin-protein ligase RNF133 OS=Homo sapiens GN=RNF133 PE=2
SV=1
Length = 376
Score = 72.4 bits (176), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 89/223 (39%), Gaps = 42/223 (18%)
Query: 7 LTIRGGCSFEDKVRNAQKAGFEAAIVYDNEDDG-------------VLVAMAGNSAGIKI 53
L RGGC+F K++ A + G I+Y+ G V+V M GN G +I
Sbjct: 104 LIERGGCTFTQKIKVATEKGASGVIIYNVPGTGNQVFPMFHQAFEDVVVVMIGNLKGTEI 163
Query: 54 HAVFVSKASGEKLKQYAGSTDMEIWIIPSFENSAWSIMAISFISLLAMSAVLATCFFVRR 113
+ K G + IW+ + +SF+ + +A LA F
Sbjct: 164 FH-LIKKGVLITAVVEVGRKHI-IWM---------NHYLVSFV--IVTTATLAYFIFYHI 210
Query: 114 HRI---RREAPRASR-----GREFHGMSRRLVKAMPSLIFTAVVEDNCTSRTCAICLEDY 165
HR+ R + R R F + R+VK E N +C IC E Y
Sbjct: 211 HRLCLARIQNRRWQRLTTDLQNTFGQLQLRVVKEGDE-------EINPNGDSCVICFERY 263
Query: 166 SVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTSTG 208
+ +RIL C+H FH C+D W+ T CP+CK D G
Sbjct: 264 KPNDIVRILTCKHFFHKNCIDPWILPHGT-CPICKCDILKVLG 305
>sp|Q9M0R5|ATL36_ARATH Putative RING-H2 finger protein ATL36 OS=Arabidopsis thaliana
GN=ATL36 PE=3 SV=1
Length = 345
Score = 72.4 bits (176), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 68/131 (51%), Gaps = 10/131 (7%)
Query: 86 SAWSIMAIS----FISLLAMSAVLATCFFVRRHRIRREAPRASRGREFHGMSRRLVKAMP 141
SA SI+AI FISL +S L F+ R I R G+ + ++++ P
Sbjct: 47 SADSIIAIVVLAIFISLGMVSCCLHCIFY--REEIGAAGQDVLHSRARRGLEKEVIESFP 104
Query: 142 SLIFTAV--VEDNCTSRTCAICLEDYSVGEKLRILP-CRHKFHAFCVDSWLTSWRTFCPV 198
+ +++ V ++ CAICL ++ E LR +P C H FHA C+D WL+SW T CPV
Sbjct: 105 TFLYSEVKGLKIGKGGVECAICLSEFEDQETLRWMPPCSHTFHANCIDVWLSSWST-CPV 163
Query: 199 CKRDARTSTGE 209
C+ + GE
Sbjct: 164 CRANLSLKPGE 174
>sp|G3X9R7|RN148_MOUSE RING finger protein 148 OS=Mus musculus GN=Rnf148 PE=2 SV=1
Length = 316
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 85/204 (41%), Gaps = 6/204 (2%)
Query: 2 SSAFVLTIRGGCSFEDKVRNAQKAGFEAAIVYDNEDDGVLVAMAGNSAGIKIHAVFVSKA 61
+ L RGGC+F K+ A + G I+Y+ G V + I AV +
Sbjct: 112 DTWLALIERGGCTFTHKINLAAEKGANGVIIYNYPGTGNKVFPMSHQGTENIVAVMIGNL 171
Query: 62 SG-EKLKQYAGSTDMEIWIIPSFENSAW-SIMAISFISLLAMSAVLATCFFVRRHRIRRE 119
G E L + I I + W S +S + LA + + R R+
Sbjct: 172 KGMELLHLIQQGVYVTIIIEVGRMHMPWLSHYVMSLFTFLAATVTYLFLYCAWRPRVSNS 231
Query: 120 APRASRGREFHGMSRRLVKAMPSLIFT-AVVEDNCTSRTCAICLEDYSVGEKLRILPCRH 178
+ R R R+ ++ + + + E + +C +C + Y + +RIL C+H
Sbjct: 232 STR--RQRQLKADVKKAIGQLQLRVLQDGDKELDPNEDSCVVCFDMYKAQDVIRILTCKH 289
Query: 179 KFHAFCVDSWLTSWRTFCPVCKRD 202
FH C+D WL + RT CP+CK D
Sbjct: 290 FFHKTCIDPWLLAHRT-CPMCKCD 312
>sp|Q9LT17|BBR_ARATH E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis thaliana
GN=BBR PE=2 SV=1
Length = 340
Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 57/125 (45%), Gaps = 24/125 (19%)
Query: 86 SAWSIM---AISFISLLAMSAVLATCFFVRRHRIRREAPRASRGREFHGMSRRLVKAMPS 142
AW M +S+ LLA+ ++ T E G+S + ++PS
Sbjct: 233 DAWDEMDPDELSYEELLALGDIVGT--------------------ESRGLSADTIASLPS 272
Query: 143 LIFTAVVEDNCTSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRD 202
+ N T+ +C IC DY E L +LPC+H +H+ C+++WL CPVC +
Sbjct: 273 KRYKEGDNQNGTNESCVICRLDYEDDEDLILLPCKHSYHSECINNWL-KINKVCPVCSAE 331
Query: 203 ARTST 207
TST
Sbjct: 332 VSTST 336
>sp|Q08CG8|RNF44_DANRE RING finger protein 44 OS=Danio rerio GN=rnf44 PE=2 SV=1
Length = 448
Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 49/74 (66%), Gaps = 4/74 (5%)
Query: 131 GMSRRLVKAMPSLIFTAVVEDNCTSRT-CAICLEDYSVGEKLRILPCRHKFHAFCVDSWL 189
G+++ ++ +PS F +E++ + +T C +C D+ + LR+LPC H+FHA CVD WL
Sbjct: 370 GLTKADIEQLPSYRFN--LENHQSEQTLCVVCFSDFESRQLLRVLPCNHEFHAKCVDKWL 427
Query: 190 TSWRTFCPVCKRDA 203
+ RT CP+C+ DA
Sbjct: 428 KTNRT-CPICRADA 440
>sp|Q68DV7|RNF43_HUMAN E3 ubiquitin-protein ligase RNF43 OS=Homo sapiens GN=RNF43 PE=1
SV=1
Length = 783
Score = 68.9 bits (167), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 82/197 (41%), Gaps = 16/197 (8%)
Query: 14 SFEDKVRNAQKAGFEAAIVYDNEDDGVLVAMAGNSAGIKIHAVFVSKASGEKLKQYAGST 73
S K R A + G +A+++D +D G+ V + EKL ++
Sbjct: 121 SLASKARMAGERG-ASAVLFDITEDRAAAEQLQQPLGLTWPVVLIWGNDAEKLMEFVYKN 179
Query: 74 DMEIWIIPSFENSAWSIMAISFISLLAMSAVLATCFFVRRHRIRREAPRASRGREFHGMS 133
I E AW + + + + + V R R R PR SR +
Sbjct: 180 QKAHVRIELKEPPAWPDYDVWILMTVVGTIFVIILASVLRIRCR---PRHSRPDPLQQRT 236
Query: 134 RRLVKAMPSLIFTAVVED----------NCTSR-TCAICLEDYSVGEKLRILPCRHKFHA 182
+ + + + A +C+S CAICLE++S G++LR++ C H+FH
Sbjct: 237 AWAISQLATRRYQASCRQARGEWPDSGSSCSSAPVCAICLEEFSEGQELRVISCLHEFHR 296
Query: 183 FCVDSWLTSWRTFCPVC 199
CVD WL RT CP+C
Sbjct: 297 NCVDPWLHQHRT-CPLC 312
>sp|O22755|ATL44_ARATH RING-H2 finger protein ATL44 OS=Arabidopsis thaliana GN=ATL44 PE=2
SV=1
Length = 185
Score = 68.9 bits (167), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 67/120 (55%), Gaps = 14/120 (11%)
Query: 89 SIMAISFISLLAMSAVLATCFFVRRHRIRREAPRASRGREFHGMSRRLVKAMPSLIFTAV 148
S + + I + ++AV+ C ++RR ++P ++G + ++ ++++P FTA
Sbjct: 33 SALLCALICVAGLAAVV-RCAWLRRFTAGGDSPSPNKG-----LKKKALQSLPRSTFTAA 86
Query: 149 ------VEDNCTSRTCAICLEDYSVGEKLRILP-CRHKFHAFCVDSWLTSWRTFCPVCKR 201
+ S CAICL D++ GE++R+LP C H FH C+D WL S R+ CP C+R
Sbjct: 87 ESTSGAAAEEGDSTECAICLTDFADGEEIRVLPLCGHSFHVECIDKWLVS-RSSCPSCRR 145
>sp|Q07G42|RNF12_XENTR E3 ubiquitin-protein ligase RNF12 OS=Xenopus tropicalis GN=rnf12
PE=2 SV=1
Length = 639
Score = 68.6 bits (166), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 134 RRLVKAMPSLIFTAVVEDNCTSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWR 193
R L K + T +N +TC++C+ +Y+ G KLR LPC H++H C+D WL S
Sbjct: 561 RGLTKEQIDNLSTRNFGENDALKTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWL-SEN 619
Query: 194 TFCPVCKR 201
+ CP+C+R
Sbjct: 620 STCPICRR 627
>sp|Q4V7B8|RNF44_RAT RING finger protein 44 OS=Rattus norvegicus GN=Rnf44 PE=2 SV=1
Length = 350
Score = 68.6 bits (166), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 48/74 (64%), Gaps = 4/74 (5%)
Query: 131 GMSRRLVKAMPSLIFTAVVEDNCTSRT-CAICLEDYSVGEKLRILPCRHKFHAFCVDSWL 189
G+++ ++ +PS F + + + +T C +C D+ V + LR+LPC H+FHA CVD WL
Sbjct: 272 GLTKADIEQLPSYRFNP--DSHQSEQTLCVVCFSDFEVRQLLRVLPCNHEFHAKCVDKWL 329
Query: 190 TSWRTFCPVCKRDA 203
+ RT CP+C+ DA
Sbjct: 330 KANRT-CPICRADA 342
>sp|Q3UHJ8|RNF44_MOUSE RING finger protein 44 OS=Mus musculus GN=Rnf44 PE=2 SV=1
Length = 407
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 48/74 (64%), Gaps = 4/74 (5%)
Query: 131 GMSRRLVKAMPSLIFTAVVEDNCTSRT-CAICLEDYSVGEKLRILPCRHKFHAFCVDSWL 189
G+++ ++ +PS F + + + +T C +C D+ V + LR+LPC H+FHA CVD WL
Sbjct: 329 GLTKADIEQLPSYRFNP--DSHQSEQTLCVVCFSDFEVRQLLRVLPCNHEFHAKCVDKWL 386
Query: 190 TSWRTFCPVCKRDA 203
+ RT CP+C+ DA
Sbjct: 387 KANRT-CPICRADA 399
>sp|Q641J8|RF12A_XENLA E3 ubiquitin-protein ligase RNF12-A OS=Xenopus laevis GN=rnf12-a
PE=1 SV=1
Length = 622
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 134 RRLVKAMPSLIFTAVVEDNCTSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWR 193
R L K + T +N +TC++C+ +Y+ G KLR LPC H++H C+D WL S
Sbjct: 544 RGLTKEQIDNLSTRNFGENDALKTCSVCITEYTEGNKLRKLPCSHEYHIHCIDRWL-SEN 602
Query: 194 TFCPVCKR 201
+ CP+C+R
Sbjct: 603 STCPICRR 610
>sp|Q5SSZ7|ZNRF3_MOUSE E3 ubiquitin-protein ligase ZNRF3 OS=Mus musculus GN=Znrf3 PE=2
SV=1
Length = 913
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 91/215 (42%), Gaps = 30/215 (13%)
Query: 18 KVRNAQKAGFEAAIVYDNEDDGVLVAM-AGNSAGIKIHAVFVSKASGEKLKQYAGSTDM- 75
K + A + G A I +E+ + + G+ +K V+V A KL +
Sbjct: 139 KAKRAVQRGATAVIFDVSENPEAIDQLNQGSEDPLKRPVVYVKGADAIKLMNIVNKQKVA 198
Query: 76 --EIWIIPSFENSAWSIMAISFISLLAMSAVLATCFFVRRHRIRREAPRASRGREFHGMS 133
I +P + + + M I F++ + +++ V+ +R R + M+
Sbjct: 199 RARIQHLPPRQPTEYFDMGI-FLAFFVVVSLVCLILLVKIKLKQR--------RSQNSMN 249
Query: 134 RRLVKAMPSLIF-------TAVVEDNC---------TSRTCAICLEDYSVGEKLRILPCR 177
R V+A+ + E +C ++ CAICLE Y GE+LR++PC
Sbjct: 250 RLAVQALEKMETRKFNSKSKGRREGSCGALDTLSSGSTSDCAICLEKYIDGEELRVIPCT 309
Query: 178 HKFHAFCVDSWLTSWRTFCPVCKRDARTSTGEPPA 212
H+FH CVD WL T CP C+ + G P A
Sbjct: 310 HRFHRKCVDPWLLQHHT-CPHCRHNIIEQKGNPGA 343
>sp|Q7T037|RF12B_XENLA E3 ubiquitin-protein ligase RNF12-B OS=Xenopus laevis GN=rnf12-b
PE=2 SV=1
Length = 757
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 134 RRLVKAMPSLIFTAVVEDNCTSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWR 193
R L K + T +N +TC++C+ +Y+ G KLR LPC H++H C+D WL S
Sbjct: 679 RGLTKEQIDNLSTRNYGENDALKTCSVCITEYTEGNKLRKLPCSHEYHIHCIDRWL-SEN 737
Query: 194 TFCPVCKR 201
+ CP+C+R
Sbjct: 738 STCPICRR 745
>sp|Q9H0F5|RNF38_HUMAN RING finger protein 38 OS=Homo sapiens GN=RNF38 PE=1 SV=4
Length = 515
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 48/74 (64%), Gaps = 4/74 (5%)
Query: 131 GMSRRLVKAMPSLIFTAVVEDNCTSRT-CAICLEDYSVGEKLRILPCRHKFHAFCVDSWL 189
G+++ ++ +PS F ++ + +T C +C+ D+ + LR+LPC H+FHA CVD WL
Sbjct: 437 GLTKADIEQLPSYRFNP--NNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWL 494
Query: 190 TSWRTFCPVCKRDA 203
+ RT CP+C+ DA
Sbjct: 495 KANRT-CPICRADA 507
>sp|Q9DBU5|RNF6_MOUSE E3 ubiquitin-protein ligase RNF6 OS=Mus musculus GN=Rnf6 PE=1 SV=1
Length = 667
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 129 FHGMSRRLVKAMPSLIFTAVVEDNCTSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSW 188
G+++ + + + + D+ + C++C+ DY G KLR LPC H+FH C+D W
Sbjct: 585 IRGLTKEQIDNLSTRSYEQDGVDSELGKVCSVCISDYVAGNKLRQLPCLHEFHIHCIDRW 644
Query: 189 LTSWRTFCPVCKR 201
L S CPVC+R
Sbjct: 645 L-SENCTCPVCRR 656
>sp|Q2TA44|RN148_BOVIN RING finger protein 148 OS=Bos taurus GN=RNF148 PE=2 SV=1
Length = 303
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 85/202 (42%), Gaps = 12/202 (5%)
Query: 7 LTIRGGCSFEDKVRNAQKAGFEAAIVYDNEDDGVLVAMAGNSAGIKIHAVFVSKASG-EK 65
L RGGC+F K+ A + G I+Y+ G V + I AV + G E
Sbjct: 104 LIERGGCTFTRKINVAAEKGANGVIIYNYPGTGNKVFPMSHQGTENIVAVMIGNLKGMEL 163
Query: 66 LKQYAGSTDMEIWIIPSFENSAWSIMAISFISLLA-MSAVLATCFFVRRHRIRREAPRAS 124
L ++I I + W ++ +SL ++A +A F R R
Sbjct: 164 LHLIQKGVYVKIIIEVGRMHMPW--LSHYIMSLFTFLTATVAYLFLYCAWRPRGPNFSTR 221
Query: 125 RGREFHGMSRRLVKAMPSLIFTAVVEDNC----TSRTCAICLEDYSVGEKLRILPCRHKF 180
R R+ R KA+ L + E + C +C + Y + +RIL C+H F
Sbjct: 222 RQRQLKADVR---KAIGKLQLRVLQEGDKELEPDEDNCVVCFDIYKPQDVVRILTCKHIF 278
Query: 181 HAFCVDSWLTSWRTFCPVCKRD 202
H C+D WL + RT CP+CK D
Sbjct: 279 HKACIDPWLLAHRT-CPMCKCD 299
>sp|Q8BI21|RNF38_MOUSE RING finger protein 38 OS=Mus musculus GN=Rnf38 PE=2 SV=1
Length = 518
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 47/74 (63%), Gaps = 4/74 (5%)
Query: 131 GMSRRLVKAMPSLIFTAVVEDNCTSRT-CAICLEDYSVGEKLRILPCRHKFHAFCVDSWL 189
G+++ ++ +PS F ++ + +T C +C+ D+ + LR+LPC H+FHA CVD WL
Sbjct: 440 GLTKADIEQLPSYRFNP--SNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWL 497
Query: 190 TSWRTFCPVCKRDA 203
RT CP+C+ DA
Sbjct: 498 KGNRT-CPICRADA 510
>sp|Q9WTV7|RNF12_MOUSE E3 ubiquitin-protein ligase RLIM OS=Mus musculus GN=Rlim PE=1 SV=2
Length = 600
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 151 DNCTSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKR 201
+N +TC++C+ +Y+ G KLR LPC H++H C+D WL+ T CP+C+R
Sbjct: 539 ENDALKTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENST-CPICRR 588
>sp|Q9NVW2|RNF12_HUMAN E3 ubiquitin-protein ligase RLIM OS=Homo sapiens GN=RLIM PE=1 SV=3
Length = 624
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 134 RRLVKAMPSLIFTAVVEDNCTSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWR 193
R L K + +N +TC++C+ +Y+ G KLR LPC H++H C+D WL+
Sbjct: 546 RGLTKEQIDNLAMRSFGENDALKTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENS 605
Query: 194 TFCPVCKR 201
T CP+C+R
Sbjct: 606 T-CPICRR 612
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.127 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 127,950,180
Number of Sequences: 539616
Number of extensions: 4931416
Number of successful extensions: 24833
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 227
Number of HSP's successfully gapped in prelim test: 639
Number of HSP's that attempted gapping in prelim test: 21110
Number of HSP's gapped (non-prelim): 2747
length of query: 370
length of database: 191,569,459
effective HSP length: 119
effective length of query: 251
effective length of database: 127,355,155
effective search space: 31966143905
effective search space used: 31966143905
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)