Query 017521
Match_columns 370
No_of_seqs 364 out of 2528
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 15:46:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017521.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017521hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2l0b_A E3 ubiquitin-protein li 99.7 3.6E-17 1.2E-21 130.4 6.9 79 126-205 11-89 (91)
2 1x4j_A Ring finger protein 38; 99.6 2.5E-16 8.7E-21 120.6 3.7 69 136-206 5-73 (75)
3 3icu_A E3 ubiquitin-protein li 99.6 6E-16 2.1E-20 139.7 5.5 78 2-80 104-184 (194)
4 2ep4_A Ring finger protein 24; 99.5 1.1E-14 3.7E-19 111.0 6.1 53 154-207 14-66 (74)
5 2ect_A Ring finger protein 126 99.5 1.1E-14 3.6E-19 112.2 5.9 57 153-210 13-69 (78)
6 2kiz_A E3 ubiquitin-protein li 99.5 1.8E-14 6.2E-19 108.2 5.7 54 153-207 12-65 (69)
7 1iym_A EL5; ring-H2 finger, ub 99.5 1.6E-14 5.4E-19 103.6 3.7 49 155-204 5-54 (55)
8 1v87_A Deltex protein 2; ring- 99.4 1.9E-13 6.4E-18 112.7 7.9 60 155-214 25-103 (114)
9 2ecl_A Ring-box protein 2; RNF 99.4 1.2E-13 4E-18 107.7 4.3 51 155-206 15-77 (81)
10 2d8s_A Cellular modulator of i 99.4 2E-13 6.7E-18 106.4 5.1 58 153-211 13-76 (80)
11 2ecm_A Ring finger and CHY zin 99.4 2.3E-13 7.9E-18 97.4 4.8 50 154-204 4-54 (55)
12 2ea6_A Ring finger protein 4; 99.3 5E-13 1.7E-17 99.8 4.4 52 153-205 13-68 (69)
13 3ng2_A RNF4, snurf, ring finge 99.3 5.5E-13 1.9E-17 100.3 3.8 53 154-207 9-65 (71)
14 3dpl_R Ring-box protein 1; ubi 99.3 1.3E-12 4.5E-17 107.0 6.1 51 153-204 35-100 (106)
15 2xeu_A Ring finger protein 4; 99.3 7.7E-13 2.6E-17 97.3 3.6 51 155-206 3-57 (64)
16 2ecn_A Ring finger protein 141 99.3 1.2E-12 4E-17 98.5 3.4 50 154-208 14-63 (70)
17 2djb_A Polycomb group ring fin 99.3 4.9E-12 1.7E-16 95.8 6.0 53 154-209 14-66 (72)
18 2d8t_A Dactylidin, ring finger 99.3 1.2E-12 4.1E-17 99.0 1.8 50 154-207 14-63 (71)
19 2ct2_A Tripartite motif protei 99.2 5.9E-12 2E-16 98.5 5.4 53 154-206 14-69 (88)
20 1chc_A Equine herpes virus-1 r 99.2 5.2E-12 1.8E-16 94.3 4.7 49 155-206 5-53 (68)
21 2ecy_A TNF receptor-associated 99.2 6.6E-12 2.3E-16 93.4 4.0 50 154-206 14-63 (66)
22 4a0k_B E3 ubiquitin-protein li 99.2 2.5E-12 8.6E-17 107.1 1.7 52 152-204 45-111 (117)
23 2ysl_A Tripartite motif-contai 99.2 1.1E-11 3.8E-16 93.7 4.4 50 154-206 19-70 (73)
24 1g25_A CDK-activating kinase a 99.2 1.6E-11 5.5E-16 91.0 4.3 53 155-207 3-57 (65)
25 2yur_A Retinoblastoma-binding 99.2 2.6E-11 8.9E-16 92.4 5.5 49 154-205 14-64 (74)
26 2csy_A Zinc finger protein 183 99.2 1.6E-11 5.6E-16 95.0 4.2 47 154-204 14-60 (81)
27 2ct0_A Non-SMC element 1 homol 99.1 2.8E-11 9.5E-16 92.7 4.8 53 155-209 15-68 (74)
28 1t1h_A Gspef-atpub14, armadill 99.1 3.8E-11 1.3E-15 92.0 4.7 50 154-206 7-56 (78)
29 2ysj_A Tripartite motif-contai 99.1 6.2E-11 2.1E-15 87.2 4.9 43 154-199 19-63 (63)
30 2ecw_A Tripartite motif-contai 99.1 8.3E-11 2.8E-15 90.9 5.4 50 154-206 18-72 (85)
31 4ayc_A E3 ubiquitin-protein li 99.1 3.6E-11 1.2E-15 102.6 3.5 47 155-205 53-99 (138)
32 3lrq_A E3 ubiquitin-protein li 99.1 4.5E-11 1.5E-15 96.5 3.6 50 155-206 22-71 (100)
33 4ap4_A E3 ubiquitin ligase RNF 99.1 4.6E-11 1.6E-15 99.9 3.6 53 154-207 6-62 (133)
34 2ecj_A Tripartite motif-contai 99.1 6.7E-11 2.3E-15 85.2 3.4 43 154-199 14-58 (58)
35 2ecv_A Tripartite motif-contai 99.1 1E-10 3.5E-15 90.4 4.7 50 154-206 18-72 (85)
36 2egp_A Tripartite motif-contai 99.1 2.7E-11 9.4E-16 92.8 1.2 49 154-205 11-65 (79)
37 3fl2_A E3 ubiquitin-protein li 99.0 1.7E-10 5.7E-15 96.5 5.2 48 155-205 52-99 (124)
38 3ztg_A E3 ubiquitin-protein li 99.0 2.2E-10 7.4E-15 90.6 4.7 49 153-204 11-61 (92)
39 4ap4_A E3 ubiquitin ligase RNF 99.0 1.4E-10 4.9E-15 96.9 3.8 52 154-206 71-126 (133)
40 2y43_A E3 ubiquitin-protein li 99.0 2.4E-10 8.3E-15 91.7 3.7 48 155-205 22-69 (99)
41 2ckl_B Ubiquitin ligase protei 99.0 2.9E-10 1E-14 99.6 4.5 49 155-205 54-102 (165)
42 2ckl_A Polycomb group ring fin 99.0 3.3E-10 1.1E-14 92.4 3.9 49 155-206 15-63 (108)
43 1z6u_A NP95-like ring finger p 98.9 4.6E-10 1.6E-14 97.3 4.9 49 155-206 78-126 (150)
44 1e4u_A Transcriptional repress 98.9 1.1E-09 3.9E-14 84.5 5.5 53 154-207 10-64 (78)
45 1jm7_A BRCA1, breast cancer ty 98.9 5.5E-10 1.9E-14 91.2 3.8 49 155-206 21-71 (112)
46 3l11_A E3 ubiquitin-protein li 98.9 2.3E-10 7.8E-15 94.3 1.4 48 155-205 15-62 (115)
47 3hct_A TNF receptor-associated 98.9 5.1E-10 1.7E-14 92.8 3.4 50 154-206 17-66 (118)
48 1rmd_A RAG1; V(D)J recombinati 98.9 8.4E-10 2.9E-14 91.0 4.2 50 155-207 23-72 (116)
49 3knv_A TNF receptor-associated 98.8 7.4E-10 2.5E-14 95.1 1.5 49 154-205 30-78 (141)
50 1bor_A Transcription factor PM 98.8 8.6E-10 2.9E-14 79.5 1.6 46 154-206 5-50 (56)
51 2vje_A E3 ubiquitin-protein li 98.8 1.6E-09 5.6E-14 80.3 3.1 47 155-205 8-57 (64)
52 2y1n_A E3 ubiquitin-protein li 98.8 1.8E-09 6.2E-14 106.7 4.0 50 155-207 332-381 (389)
53 2vje_B MDM4 protein; proto-onc 98.7 3.3E-09 1.1E-13 78.4 2.8 49 155-205 7-56 (63)
54 2kr4_A Ubiquitin conjugation f 98.7 7.3E-09 2.5E-13 81.1 4.1 49 154-206 13-61 (85)
55 1wgm_A Ubiquitin conjugation f 98.7 7.2E-09 2.5E-13 83.5 3.7 49 154-206 21-70 (98)
56 2kre_A Ubiquitin conjugation f 98.7 6.3E-09 2.1E-13 84.1 3.1 48 154-205 28-75 (100)
57 2ek8_A Aminopeptidase; metallo 98.7 1.6E-08 5.6E-13 101.1 6.4 69 1-70 113-181 (421)
58 1jm7_B BARD1, BRCA1-associated 98.7 4.4E-09 1.5E-13 87.0 1.3 45 155-205 22-67 (117)
59 1vyx_A ORF K3, K3RING; zinc-bi 98.7 1.5E-08 5.3E-13 74.3 4.1 48 154-204 5-58 (60)
60 2c2l_A CHIP, carboxy terminus 98.6 8.7E-09 3E-13 96.5 2.6 49 154-205 207-255 (281)
61 4ic3_A E3 ubiquitin-protein li 98.6 9E-09 3.1E-13 78.4 1.9 43 155-205 24-67 (74)
62 3hcs_A TNF receptor-associated 98.6 2E-08 7E-13 88.1 3.6 50 154-206 17-66 (170)
63 3k1l_B Fancl; UBC, ring, RWD, 98.6 6.5E-09 2.2E-13 100.5 0.1 54 153-206 306-374 (381)
64 2yu4_A E3 SUMO-protein ligase 98.5 4.8E-08 1.7E-12 77.8 3.5 46 154-202 6-59 (94)
65 2ea5_A Cell growth regulator w 98.5 9.1E-08 3.1E-12 71.8 4.2 46 154-207 14-60 (68)
66 1wim_A KIAA0161 protein; ring 98.5 5.4E-08 1.8E-12 77.2 2.9 48 155-202 5-61 (94)
67 2f42_A STIP1 homology and U-bo 98.4 6.3E-08 2.2E-12 86.2 3.0 50 154-206 105-154 (179)
68 2ecg_A Baculoviral IAP repeat- 98.4 1.2E-07 4E-12 72.2 3.2 44 155-206 25-69 (75)
69 3fed_A Glutamate carboxypeptid 98.3 3.3E-07 1.1E-11 97.4 5.2 35 1-35 153-187 (707)
70 2yho_A E3 ubiquitin-protein li 98.3 1.4E-07 5E-12 72.7 1.3 45 155-207 18-63 (79)
71 3kas_A Transferrin receptor pr 98.3 4.8E-07 1.6E-11 95.2 5.5 70 1-70 130-229 (640)
72 2bay_A PRE-mRNA splicing facto 98.2 5.3E-07 1.8E-11 66.2 2.4 50 155-208 3-53 (61)
73 3htk_C E3 SUMO-protein ligase 98.1 8.5E-07 2.9E-11 83.0 3.0 49 155-205 181-232 (267)
74 3iib_A Peptidase M28; YP_92679 98.1 2.6E-06 8.7E-11 85.9 6.0 71 1-71 127-214 (444)
75 3t6p_A Baculoviral IAP repeat- 98.1 5.8E-07 2E-11 87.8 1.2 44 154-205 294-338 (345)
76 3vk6_A E3 ubiquitin-protein li 98.0 3.4E-06 1.2E-10 67.4 3.9 49 157-207 3-51 (101)
77 1y9z_A Alkaline serine proteas 97.9 1.5E-05 5.1E-10 80.1 6.8 72 1-72 272-350 (441)
78 1xf1_A C5A peptidase, SCP; hyd 97.7 2.7E-05 9.4E-10 85.2 6.5 64 1-67 279-342 (926)
79 3nw0_A Non-structural maintena 97.7 2.1E-05 7.1E-10 73.0 4.1 52 155-208 180-232 (238)
80 3i6s_A Subtilisin-like proteas 97.5 3.1E-05 1.1E-09 81.6 3.3 65 1-72 282-346 (649)
81 2lri_C Autoimmune regulator; Z 93.6 0.04 1.4E-06 40.6 2.8 45 155-202 12-59 (66)
82 2jun_A Midline-1; B-BOX, TRIM, 93.1 0.04 1.4E-06 43.4 2.2 34 155-188 3-36 (101)
83 2ko5_A Ring finger protein Z; 91.7 0.2 7E-06 39.3 4.6 49 154-208 27-76 (99)
84 2k16_A Transcription initiatio 89.7 0.1 3.5E-06 39.0 1.1 51 154-204 17-70 (75)
85 1we9_A PHD finger family prote 86.3 0.17 5.9E-06 36.5 0.5 48 154-201 5-57 (64)
86 2l5u_A Chromodomain-helicase-D 85.7 0.37 1.3E-05 34.6 2.1 46 154-202 10-58 (61)
87 1wil_A KIAA1045 protein; ring 84.3 0.52 1.8E-05 36.3 2.3 34 154-188 14-47 (89)
88 1wem_A Death associated transc 83.8 0.4 1.4E-05 35.9 1.6 47 155-202 16-70 (76)
89 3vta_A Cucumisin; subtilisin-l 83.5 0.55 1.9E-05 48.9 3.0 57 1-68 280-336 (621)
90 1mm2_A MI2-beta; PHD, zinc fin 82.7 0.24 8.2E-06 35.6 -0.1 47 153-202 7-56 (61)
91 1f62_A Transcription factor WS 82.6 0.47 1.6E-05 32.5 1.4 45 157-201 2-49 (51)
92 3u5n_A E3 ubiquitin-protein li 81.7 0.25 8.5E-06 44.2 -0.4 48 153-203 5-55 (207)
93 3lqh_A Histone-lysine N-methyl 81.5 0.35 1.2E-05 42.7 0.5 48 155-202 2-63 (183)
94 2ysm_A Myeloid/lymphoid or mix 81.0 0.39 1.3E-05 38.5 0.6 47 154-200 6-55 (111)
95 3o36_A Transcription intermedi 79.8 0.38 1.3E-05 42.1 0.2 45 155-202 4-51 (184)
96 2yql_A PHD finger protein 21A; 78.4 0.24 8.1E-06 34.9 -1.3 45 154-201 8-55 (56)
97 2lv9_A Histone-lysine N-methyl 78.1 0.47 1.6E-05 37.4 0.2 46 155-201 28-75 (98)
98 2yt5_A Metal-response element- 77.5 0.37 1.3E-05 34.9 -0.6 49 154-202 5-61 (66)
99 2lbm_A Transcriptional regulat 77.4 2 6.8E-05 36.3 3.9 47 152-201 60-116 (142)
100 3v43_A Histone acetyltransfera 76.7 1.7 5.7E-05 34.9 3.2 46 155-200 5-62 (112)
101 2puy_A PHD finger protein 21A; 76.5 0.28 9.6E-06 35.0 -1.4 48 154-204 4-54 (60)
102 1wep_A PHF8; structural genomi 75.2 1.4 4.8E-05 33.1 2.1 48 155-203 12-64 (79)
103 1xwh_A Autoimmune regulator; P 73.1 0.86 2.9E-05 33.1 0.5 46 154-202 7-55 (66)
104 1weu_A Inhibitor of growth fam 72.9 1.5 5E-05 34.3 1.8 45 154-202 35-85 (91)
105 2cs3_A Protein C14ORF4, MY039 72.1 3.9 0.00013 31.1 3.8 36 155-191 15-52 (93)
106 1fp0_A KAP-1 corepressor; PHD 72.0 1.7 5.7E-05 33.7 1.9 46 154-202 24-72 (88)
107 2xb1_A Pygopus homolog 2, B-ce 71.7 0.58 2E-05 37.4 -0.8 48 155-202 3-61 (105)
108 1wen_A Inhibitor of growth fam 71.5 1.9 6.5E-05 31.9 2.1 45 154-202 15-65 (71)
109 1wew_A DNA-binding family prot 71.0 1.4 4.7E-05 33.1 1.2 47 155-202 16-72 (78)
110 3o70_A PHD finger protein 13; 70.7 0.82 2.8E-05 33.6 -0.1 47 154-201 18-66 (68)
111 3ql9_A Transcriptional regulat 70.4 3.6 0.00012 34.1 3.7 47 152-201 54-110 (129)
112 2kgg_A Histone demethylase jar 69.4 1.4 4.9E-05 30.4 0.9 44 157-200 4-52 (52)
113 2e6r_A Jumonji/ARID domain-con 67.9 0.52 1.8E-05 36.8 -1.8 49 154-202 15-66 (92)
114 2ri7_A Nucleosome-remodeling f 67.5 1.3 4.6E-05 38.1 0.5 47 155-202 8-59 (174)
115 2ro1_A Transcription intermedi 66.7 0.99 3.4E-05 39.8 -0.5 45 155-202 2-49 (189)
116 2l43_A N-teminal domain from h 66.2 1.2 4E-05 34.5 -0.1 52 154-205 24-78 (88)
117 3shb_A E3 ubiquitin-protein li 65.3 0.85 2.9E-05 34.4 -1.0 46 157-202 28-77 (77)
118 1wev_A Riken cDNA 1110020M19; 65.3 1.6 5.5E-05 33.6 0.5 50 155-204 16-74 (88)
119 2jwa_A Receptor tyrosine-prote 65.2 5.6 0.00019 26.7 3.1 8 107-114 31-38 (44)
120 3m62_A Ubiquitin conjugation f 64.1 3.3 0.00011 45.2 2.8 49 154-206 890-939 (968)
121 2vpb_A Hpygo1, pygopus homolog 64.1 4.9 0.00017 29.1 3.0 32 155-186 8-41 (65)
122 2e6s_A E3 ubiquitin-protein li 63.8 1.4 4.7E-05 33.2 -0.1 46 156-201 27-76 (77)
123 2kwj_A Zinc finger protein DPF 63.6 2.1 7.1E-05 34.5 0.9 45 156-200 2-59 (114)
124 3v43_A Histone acetyltransfera 62.7 2 6.7E-05 34.5 0.6 46 156-201 62-111 (112)
125 1wee_A PHD finger family prote 60.3 1.3 4.5E-05 32.6 -0.8 47 155-202 16-66 (72)
126 2vnf_A ING 4, P29ING4, inhibit 59.8 1.8 6.3E-05 30.8 -0.1 43 155-201 10-58 (60)
127 1weo_A Cellulose synthase, cat 59.7 17 0.00058 28.1 5.3 58 154-211 15-76 (93)
128 3asl_A E3 ubiquitin-protein li 57.8 1.9 6.5E-05 31.7 -0.3 45 157-201 20-68 (70)
129 3c6w_A P28ING5, inhibitor of g 57.5 2.2 7.6E-05 30.3 0.0 43 155-201 9-57 (59)
130 4gne_A Histone-lysine N-methyl 56.8 6.3 0.00022 31.5 2.7 48 154-206 14-66 (107)
131 3ask_A E3 ubiquitin-protein li 56.4 2.7 9.4E-05 38.1 0.5 46 156-201 175-224 (226)
132 2rsd_A E3 SUMO-protein ligase 53.9 1.4 4.8E-05 32.2 -1.6 45 156-201 11-64 (68)
133 2d8v_A Zinc finger FYVE domain 53.3 6.9 0.00023 28.6 2.1 30 154-187 7-37 (67)
134 2ks1_B Epidermal growth factor 52.3 12 0.00041 25.0 3.0 8 107-114 31-38 (44)
135 1z60_A TFIIH basal transcripti 51.7 5 0.00017 28.7 1.1 42 156-199 16-58 (59)
136 2cu8_A Cysteine-rich protein 2 51.1 9.6 0.00033 27.6 2.7 40 155-205 9-48 (76)
137 3o7a_A PHD finger protein 13 v 51.0 2.6 8.9E-05 29.0 -0.5 42 160-201 8-51 (52)
138 2ysm_A Myeloid/lymphoid or mix 50.2 2.6 8.8E-05 33.6 -0.7 45 157-201 56-103 (111)
139 1iml_A CRIP, cysteine rich int 49.4 7.6 0.00026 28.1 1.9 41 155-200 27-68 (76)
140 2g6q_A Inhibitor of growth pro 48.8 3.7 0.00013 29.4 0.1 43 155-201 11-59 (62)
141 2l2t_A Receptor tyrosine-prote 48.5 20 0.00069 24.0 3.6 7 108-114 31-37 (44)
142 2ku3_A Bromodomain-containing 48.2 14 0.00047 27.2 3.1 48 154-201 15-65 (71)
143 2kwj_A Zinc finger protein DPF 45.9 1.9 6.5E-05 34.7 -2.1 49 156-204 59-110 (114)
144 2co8_A NEDD9 interacting prote 44.5 12 0.00042 27.6 2.4 41 154-205 14-54 (82)
145 2dj7_A Actin-binding LIM prote 44.2 14 0.00047 27.3 2.7 39 155-204 15-53 (80)
146 3i2d_A E3 SUMO-protein ligase 43.1 19 0.00064 35.0 4.0 46 156-204 250-299 (371)
147 2yw8_A RUN and FYVE domain-con 40.4 16 0.00055 27.3 2.5 35 154-188 18-53 (82)
148 1zfo_A LAsp-1; LIM domain, zin 38.8 8.7 0.0003 23.4 0.6 28 156-185 4-31 (31)
149 4fo9_A E3 SUMO-protein ligase 38.1 25 0.00084 34.0 4.0 47 156-204 216-265 (360)
150 1zbd_B Rabphilin-3A; G protein 35.8 15 0.0005 30.5 1.7 33 154-186 54-88 (134)
151 1wyh_A SLIM 2, skeletal muscle 33.8 34 0.0012 24.0 3.3 41 155-205 5-45 (72)
152 1g47_A Pinch protein; LIM doma 33.5 32 0.0011 24.6 3.1 41 155-205 11-51 (77)
153 2jmi_A Protein YNG1, ING1 homo 33.5 9 0.00031 29.6 0.0 43 155-201 26-75 (90)
154 3kv5_D JMJC domain-containing 33.5 7.9 0.00027 39.1 -0.4 46 156-202 38-88 (488)
155 1x63_A Skeletal muscle LIM-pro 32.0 36 0.0012 24.6 3.3 40 156-205 16-55 (82)
156 1x64_A Alpha-actinin-2 associa 31.9 39 0.0013 25.1 3.5 40 154-205 24-63 (89)
157 2cor_A Pinch protein; LIM doma 31.6 25 0.00085 25.7 2.3 39 155-205 15-53 (79)
158 2d8y_A Eplin protein; LIM doma 31.6 39 0.0013 25.1 3.5 40 155-205 15-54 (91)
159 1x61_A Thyroid receptor intera 31.2 46 0.0016 23.4 3.7 38 156-203 6-43 (72)
160 3kqi_A GRC5, PHD finger protei 31.1 13 0.00043 27.4 0.5 46 157-202 11-61 (75)
161 3mjh_B Early endosome antigen 30.2 5 0.00017 25.4 -1.6 15 155-169 5-19 (34)
162 3t7l_A Zinc finger FYVE domain 30.1 30 0.001 26.4 2.5 52 154-205 19-76 (90)
163 3a1b_A DNA (cytosine-5)-methyl 29.7 29 0.001 29.6 2.6 46 151-200 75-132 (159)
164 3f6q_B LIM and senescent cell 29.2 27 0.00091 24.4 2.0 42 155-206 11-52 (72)
165 1x4k_A Skeletal muscle LIM-pro 28.8 40 0.0014 23.6 2.9 40 156-205 6-45 (72)
166 1a7i_A QCRP2 (LIM1); LIM domai 28.6 21 0.00071 26.0 1.4 39 156-205 8-46 (81)
167 2d8x_A Protein pinch; LIM doma 28.4 39 0.0013 23.7 2.8 39 155-205 5-43 (70)
168 1z2q_A LM5-1; membrane protein 28.2 33 0.0011 25.7 2.5 36 153-188 19-55 (84)
169 1x4l_A Skeletal muscle LIM-pro 28.2 44 0.0015 23.5 3.1 40 155-204 5-46 (72)
170 2dar_A PDZ and LIM domain prot 27.5 57 0.0019 24.2 3.7 39 155-205 25-63 (90)
171 2pv0_B DNA (cytosine-5)-methyl 26.6 38 0.0013 33.0 3.1 47 152-201 90-147 (386)
172 1joc_A EEA1, early endosomal a 25.8 37 0.0013 27.5 2.5 34 154-187 68-102 (125)
173 1y02_A CARP2, FYVE-ring finger 25.5 9.2 0.00031 31.2 -1.2 46 155-201 19-65 (120)
174 1x68_A FHL5 protein; four-and- 24.3 55 0.0019 23.3 3.0 39 156-204 6-46 (76)
175 3gx8_A Monothiol glutaredoxin- 24.3 43 0.0015 26.6 2.6 59 2-60 15-82 (121)
176 2l4z_A DNA endonuclease RBBP8, 24.1 37 0.0013 27.2 2.2 39 155-204 61-99 (123)
177 2wul_A Glutaredoxin related pr 24.1 26 0.0009 28.2 1.3 59 2-61 19-85 (118)
178 1wd2_A Ariadne-1 protein homol 24.0 26 0.00088 24.8 1.0 24 188-211 1-24 (60)
179 1x4u_A Zinc finger, FYVE domai 23.8 44 0.0015 24.9 2.4 34 154-187 13-47 (84)
180 2zet_C Melanophilin; complex, 23.8 32 0.0011 29.1 1.8 47 154-201 67-116 (153)
181 2d8z_A Four and A half LIM dom 23.5 79 0.0027 21.9 3.7 37 156-204 6-42 (70)
182 2o35_A Hypothetical protein DU 23.2 31 0.0011 27.1 1.5 12 180-191 43-54 (105)
183 3fyb_A Protein of unknown func 23.1 32 0.0011 27.1 1.5 12 180-191 42-53 (104)
184 2l8s_A Integrin alpha-1; trans 22.7 1.2E+02 0.0041 21.1 4.2 6 87-92 9-14 (54)
185 1vfy_A Phosphatidylinositol-3- 22.5 55 0.0019 23.7 2.7 32 156-187 12-44 (73)
186 2gmg_A Hypothetical protein PF 22.2 20 0.00068 28.5 0.2 23 174-202 71-93 (105)
187 1v6g_A Actin binding LIM prote 21.9 55 0.0019 23.6 2.6 38 156-205 16-53 (81)
188 2l3k_A Rhombotin-2, linker, LI 21.5 37 0.0013 27.0 1.7 35 155-190 36-70 (123)
189 3pwf_A Rubrerythrin; non heme 21.4 44 0.0015 28.6 2.2 25 170-202 138-162 (170)
190 1x62_A C-terminal LIM domain p 21.1 51 0.0017 23.8 2.3 38 155-204 15-52 (79)
191 1wfk_A Zinc finger, FYVE domai 20.3 57 0.0019 24.7 2.4 52 155-206 9-67 (88)
192 2klu_A T-cell surface glycopro 20.2 94 0.0032 22.6 3.4 8 103-110 22-29 (70)
No 1
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=99.68 E-value=3.6e-17 Score=130.41 Aligned_cols=79 Identities=29% Similarity=0.555 Sum_probs=68.2
Q ss_pred ccccccccHHHHhccceeeeeeeeeccCCCcccccccccccCCCeeEEeCCCCcccHhHHHHHHhcCCCCCccccccccc
Q 017521 126 GREFHGMSRRLVKAMPSLIFTAVVEDNCTSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDART 205 (370)
Q Consensus 126 ~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~~~~~CP~CR~~i~~ 205 (370)
.....+++++.++.||...+........+...|+||+++|..++.++.|||+|.||..||+.|+..+. +||+||..+..
T Consensus 11 ~~~~~~~s~~~i~~lp~~~~~~~~~~~~~~~~C~IC~~~~~~~~~~~~l~C~H~Fh~~Ci~~wl~~~~-~CP~Cr~~~~~ 89 (91)
T 2l0b_A 11 MVANPPASKESIDALPEILVTEDHGAVGQEMCCPICCSEYVKGDVATELPCHHYFHKPCVSIWLQKSG-TCPVCRCMFPP 89 (91)
T ss_dssp SSCCCCCCHHHHHTSCEEECCTTCSSSSSCSEETTTTEECCTTCEEEEETTTEEEEHHHHHHHHTTTC-BCTTTCCBSSC
T ss_pred CcCCCCCCHHHHHhCCCeeecccccccCCCCCCcccChhhcCCCcEEecCCCChHHHHHHHHHHHcCC-cCcCcCccCCC
Confidence 34567889999999999988776655556789999999999999999999999999999999998754 69999998764
No 2
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.60 E-value=2.5e-16 Score=120.60 Aligned_cols=69 Identities=38% Similarity=0.859 Sum_probs=56.6
Q ss_pred HHhccceeeeeeeeeccCCCcccccccccccCCCeeEEeCCCCcccHhHHHHHHhcCCCCCcccccccccC
Q 017521 136 LVKAMPSLIFTAVVEDNCTSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTS 206 (370)
Q Consensus 136 ~~~~lp~~~~~~~~~~~~~~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~~~~~CP~CR~~i~~~ 206 (370)
.++.+|...++... ...+...|+||+++|..++.++.|||+|+||..||+.|++.+. .||+||+++...
T Consensus 5 ~i~~lp~~~~~~~~-~~~~~~~C~IC~~~~~~~~~~~~l~C~H~fh~~Ci~~w~~~~~-~CP~Cr~~~~~~ 73 (75)
T 1x4j_A 5 SSGQLPSYRFNPNN-HQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANR-TCPICRADSGPS 73 (75)
T ss_dssp CCSSCCCEEBCSSS-CSSSCCEETTTTEECCBTCEEEEETTTEEEETTHHHHHHHHCS-SCTTTCCCCCCC
T ss_pred hHhhCCcEEecCcc-ccCCCCCCeECCcccCCCCeEEEECCCCHhHHHHHHHHHHcCC-cCcCcCCcCCCC
Confidence 35677877776433 2334678999999999999999999999999999999999854 599999988764
No 3
>3icu_A E3 ubiquitin-protein ligase RNF128; E3 ligase, energy, PA domain, transmembrane,protein turnover conjugation pathway; HET: NAG; 2.10A {Homo sapiens}
Probab=99.59 E-value=6e-16 Score=139.66 Aligned_cols=78 Identities=24% Similarity=0.434 Sum_probs=63.1
Q ss_pred CceEEEEEcCC-CChHHHHHHHHHcCCcEEEEeccC-CCcceeeccCCCCCceeeEEEEecccccccccccccc-ccccc
Q 017521 2 SSAFVLTIRGG-CSFEDKVRNAQKAGFEAAIVYDNE-DDGVLVAMAGNSAGIKIHAVFVSKASGEKLKQYAGST-DMEIW 78 (370)
Q Consensus 2 ~~~ivLV~RG~-CsF~~Kv~nAq~aGA~avIVyn~~-~~~~~~~m~g~~~~i~IpvVfIs~~~Ge~L~k~l~~~-~vev~ 78 (370)
++|||||+||+ |+|.+|++|||++||+||||||++ ++.....|... ....||++||++.+|+.|++.+... .+.+.
T Consensus 104 ~gkIaLV~RG~~CsF~~Kv~nAq~aGA~avIIyNn~~~g~~~~~m~~~-~~~~IPsv~Is~~~G~~L~~~L~~G~~Vtvt 182 (194)
T 3icu_A 104 VSWLALIQRGGGCTFADKIHLAYERGASGAVIFNFPGTRNEVIPMSHP-GAVDIVAIMIGNLKGTKILQSIQRGIQVTMV 182 (194)
T ss_dssp CCEEEEEESCTTCCHHHHHHHHHHTTCSEEEEECCTTCTTCCCCCCCT-TCCSSEEEEECHHHHHHHHHHHHTTCCEEEE
T ss_pred CCeEEEEECCCCcCHHHHHHHHHHCCCcEEEEEeCCCCCCceeeecCC-CCCceeEEEECHHHHHHHHHHHHCCCeEEEE
Confidence 57999999999 999999999999999999999985 33345556543 3457999999999999999988763 44444
Q ss_pred cc
Q 017521 79 II 80 (370)
Q Consensus 79 L~ 80 (370)
+.
T Consensus 183 i~ 184 (194)
T 3icu_A 183 IE 184 (194)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 4
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.52 E-value=1.1e-14 Score=110.98 Aligned_cols=53 Identities=36% Similarity=0.891 Sum_probs=47.2
Q ss_pred CCcccccccccccCCCeeEEeCCCCcccHhHHHHHHhcCCCCCcccccccccCC
Q 017521 154 TSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTST 207 (370)
Q Consensus 154 ~~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~~~~~CP~CR~~i~~~~ 207 (370)
....|+||+++|..++.+++|+|+|.||..||..|++.+. .||+||+.+....
T Consensus 14 ~~~~C~IC~~~~~~~~~~~~~~C~H~f~~~Ci~~~~~~~~-~CP~Cr~~~~~~~ 66 (74)
T 2ep4_A 14 LHELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRK-VCPLCNMPVLQLA 66 (74)
T ss_dssp CSCBCSSSCCBCCSSSCEEEETTTEEEEHHHHHHHHHHCS-BCTTTCCBCSSCC
T ss_pred CCCCCcCCCcccCCCCcEEEcCCCCEecHHHHHHHHHcCC-cCCCcCccccccc
Confidence 4578999999999999999999999999999999999855 5999999887643
No 5
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.52 E-value=1.1e-14 Score=112.16 Aligned_cols=57 Identities=37% Similarity=0.917 Sum_probs=49.4
Q ss_pred CCCcccccccccccCCCeeEEeCCCCcccHhHHHHHHhcCCCCCcccccccccCCCCC
Q 017521 153 CTSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTSTGEP 210 (370)
Q Consensus 153 ~~~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~~~~~CP~CR~~i~~~~~~~ 210 (370)
.+...|+||++.|..++.+++|+|+|.||..||..|++.+ ..||+||..+......+
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~-~~CP~Cr~~~~~~~~~~ 69 (78)
T 2ect_A 13 GSGLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQH-DSCPVCRKSLTGQNTAT 69 (78)
T ss_dssp SSSCCCTTTTSCCCTTSCEEECTTSCEEETTTTHHHHTTT-CSCTTTCCCCCCSCSCC
T ss_pred CCCCCCeeCCccccCCCCEEEeCCCCeecHHHHHHHHHcC-CcCcCcCCccCCcccCC
Confidence 3467999999999998889999999999999999999875 45999999988765443
No 6
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=99.50 E-value=1.8e-14 Score=108.25 Aligned_cols=54 Identities=43% Similarity=0.939 Sum_probs=47.6
Q ss_pred CCCcccccccccccCCCeeEEeCCCCcccHhHHHHHHhcCCCCCcccccccccCC
Q 017521 153 CTSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTST 207 (370)
Q Consensus 153 ~~~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~~~~~CP~CR~~i~~~~ 207 (370)
.....|+||++.|..++.++.++|+|+||..||..|+..+. .||+||..+....
T Consensus 12 ~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~-~CP~Cr~~~~~~~ 65 (69)
T 2kiz_A 12 DTEEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNK-KCPICRVDIEAQL 65 (69)
T ss_dssp TCCCSBTTTTBCCCSSSCEEECTTSCEEEHHHHHHHHHHCS-BCTTTCSBSCSCC
T ss_pred CCCCCCeeCCccccCCCcEEEeCCCCHHHHHHHHHHHHcCC-CCcCcCccccCcC
Confidence 34578999999999888899999999999999999999855 5999999887654
No 7
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=99.48 E-value=1.6e-14 Score=103.61 Aligned_cols=49 Identities=47% Similarity=1.034 Sum_probs=44.2
Q ss_pred CcccccccccccCCCeeEEeC-CCCcccHhHHHHHHhcCCCCCcccccccc
Q 017521 155 SRTCAICLEDYSVGEKLRILP-CRHKFHAFCVDSWLTSWRTFCPVCKRDAR 204 (370)
Q Consensus 155 ~~~C~ICLe~~~~~~~v~~lp-C~H~FH~~Ci~~Wl~~~~~~CP~CR~~i~ 204 (370)
..+|+||+++|..++.++.++ |+|.||..||++|++.+ .+||+||+.+.
T Consensus 5 ~~~C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci~~w~~~~-~~CP~Cr~~~~ 54 (55)
T 1iym_A 5 GVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSH-STCPLCRLTVV 54 (55)
T ss_dssp SCCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTTTC-CSCSSSCCCSC
T ss_pred CCcCccCCccccCCCceEECCCCCCcccHHHHHHHHHcC-CcCcCCCCEeE
Confidence 578999999999999999998 99999999999999884 45999998764
No 8
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=99.44 E-value=1.9e-13 Score=112.67 Aligned_cols=60 Identities=30% Similarity=0.616 Sum_probs=47.4
Q ss_pred CcccccccccccCCC---------------eeEEeCCCCcccHhHHHHHHhc----CCCCCcccccccccCCCCCCCCC
Q 017521 155 SRTCAICLEDYSVGE---------------KLRILPCRHKFHAFCVDSWLTS----WRTFCPVCKRDARTSTGEPPASE 214 (370)
Q Consensus 155 ~~~C~ICLe~~~~~~---------------~v~~lpC~H~FH~~Ci~~Wl~~----~~~~CP~CR~~i~~~~~~~~~~~ 214 (370)
+..|+|||++|..++ .++.++|+|+||..||+.|+.. .+..||+||..+....+..|...
T Consensus 25 ~~~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~Fh~~Ci~~wl~~~~~~~~~~CP~CR~~~~~~~g~qp~g~ 103 (114)
T 1v87_A 25 EEDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKTIYGEKTGTQPWGK 103 (114)
T ss_dssp SCEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCCBSSSCSSSCTTSS
T ss_pred CCcCccCChhhcCcccccccccccccCcccceecCCCCCcccHHHHHHHHHcccCCCCCcCCCCCCccCCCCCCCCCCe
Confidence 468999999997643 4558899999999999999952 24569999999988766655543
No 9
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.40 E-value=1.2e-13 Score=107.68 Aligned_cols=51 Identities=29% Similarity=0.719 Sum_probs=40.2
Q ss_pred Cccccccccccc-----------CCCeeEEeC-CCCcccHhHHHHHHhcCCCCCcccccccccC
Q 017521 155 SRTCAICLEDYS-----------VGEKLRILP-CRHKFHAFCVDSWLTSWRTFCPVCKRDARTS 206 (370)
Q Consensus 155 ~~~C~ICLe~~~-----------~~~~v~~lp-C~H~FH~~Ci~~Wl~~~~~~CP~CR~~i~~~ 206 (370)
+..|+||+++|. .++.++.++ |+|.||..||++||++++ +||+||+++...
T Consensus 15 ~~~C~IC~~~~~~~C~iC~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~~-~CP~CR~~~~~~ 77 (81)
T 2ecl_A 15 CDTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQNN-RCPLCQQDWVVQ 77 (81)
T ss_dssp CSCBTTTTBCTTSCCTTHHHHTCTTTCCEEEETTSCEEEHHHHHHHTTTCC-BCTTTCCBCCEE
T ss_pred CCCCcccChhhhccCcccccccCCCceEEEeCCCCCccChHHHHHHHHhCC-CCCCcCCCcchh
Confidence 456777777774 455577776 999999999999999855 599999987643
No 10
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.40 E-value=2e-13 Score=106.41 Aligned_cols=58 Identities=28% Similarity=0.575 Sum_probs=47.1
Q ss_pred CCCcccccccccccCCCeeEEeCCC-----CcccHhHHHHHHhcCC-CCCcccccccccCCCCCC
Q 017521 153 CTSRTCAICLEDYSVGEKLRILPCR-----HKFHAFCVDSWLTSWR-TFCPVCKRDARTSTGEPP 211 (370)
Q Consensus 153 ~~~~~C~ICLe~~~~~~~v~~lpC~-----H~FH~~Ci~~Wl~~~~-~~CP~CR~~i~~~~~~~~ 211 (370)
.+...|.||+++|..++.+ ++||+ |.||..||++||..++ .+||+||..+.......|
T Consensus 13 ~~~~~C~IC~~~~~~~~~l-~~pC~C~Gs~h~fH~~Cl~~Wl~~~~~~~CplCr~~~~~~~~~~P 76 (80)
T 2d8s_A 13 SSQDICRICHCEGDDESPL-ITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKYEFIMETKLSG 76 (80)
T ss_dssp TTSCCCSSSCCCCCSSSCE-ECSSSCCSSSCCEETTHHHHHHHHHCCSBCSSSCCBCCCCCCSCC
T ss_pred CCCCCCeEcCccccCCCee-EeccccCCcCCeeCHHHHHHHHhhCCCCCCCCCCCeeecCcccCC
Confidence 3457899999999887776 69996 9999999999999743 569999999876554433
No 11
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=99.39 E-value=2.3e-13 Score=97.38 Aligned_cols=50 Identities=34% Similarity=0.721 Sum_probs=42.6
Q ss_pred CCcccccccccccCC-CeeEEeCCCCcccHhHHHHHHhcCCCCCcccccccc
Q 017521 154 TSRTCAICLEDYSVG-EKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDAR 204 (370)
Q Consensus 154 ~~~~C~ICLe~~~~~-~~v~~lpC~H~FH~~Ci~~Wl~~~~~~CP~CR~~i~ 204 (370)
+...|+||+++|..+ +.++.++|+|.||..||+.|+... ..||+||+.+.
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~-~~CP~Cr~~~~ 54 (55)
T 2ecm_A 4 GSSGCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEG-YRCPLCSGPSS 54 (55)
T ss_dssp CCCSCTTTCCCCCTTTSCEEECTTSCEEETTHHHHHHHHT-CCCTTSCCSSC
T ss_pred CCCcCcccChhhcCCCcCeEecCCCCcccHHHHHHHHHcC-CcCCCCCCcCC
Confidence 357899999999654 467889999999999999999986 45999998764
No 12
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.35 E-value=5e-13 Score=99.79 Aligned_cols=52 Identities=25% Similarity=0.618 Sum_probs=43.3
Q ss_pred CCCcccccccccccCC----CeeEEeCCCCcccHhHHHHHHhcCCCCCccccccccc
Q 017521 153 CTSRTCAICLEDYSVG----EKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDART 205 (370)
Q Consensus 153 ~~~~~C~ICLe~~~~~----~~v~~lpC~H~FH~~Ci~~Wl~~~~~~CP~CR~~i~~ 205 (370)
.+...|+||++.|... +.+..++|+|.||..||+.|+..+. .||+||..+..
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~-~CP~Cr~~~~~ 68 (69)
T 2ea6_A 13 SGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNAN-TCPTCRKKINH 68 (69)
T ss_dssp TCCCCCTTTCCCHHHHTTTTCCEEECSSSCEEEHHHHHHHHHHCS-SCTTTCCCCCC
T ss_pred CCCCCCcccCccccccccccCCeEeCCCCChhcHHHHHHHHHcCC-CCCCCCCccCc
Confidence 3457899999999753 4557889999999999999999844 59999998754
No 13
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=99.33 E-value=5.5e-13 Score=100.31 Aligned_cols=53 Identities=26% Similarity=0.675 Sum_probs=44.6
Q ss_pred CCcccccccccccC----CCeeEEeCCCCcccHhHHHHHHhcCCCCCcccccccccCC
Q 017521 154 TSRTCAICLEDYSV----GEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTST 207 (370)
Q Consensus 154 ~~~~C~ICLe~~~~----~~~v~~lpC~H~FH~~Ci~~Wl~~~~~~CP~CR~~i~~~~ 207 (370)
+...|+||++.|.. ++.+..++|||.||..||+.|++.+. .||+||..+....
T Consensus 9 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~-~CP~Cr~~~~~~~ 65 (71)
T 3ng2_A 9 GTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNAN-TCPTCRKKINHKR 65 (71)
T ss_dssp TCCBCTTTCCBHHHHHTTTCCEEECTTSCEEEHHHHHHHHHHCS-BCTTTCCBCCCCS
T ss_pred CCCCCcccChhhhccccccCCeEeCCCCChHhHHHHHHHHHcCC-CCCCCCCccChhh
Confidence 35789999999865 35668899999999999999999854 5999999887543
No 14
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=99.32 E-value=1.3e-12 Score=107.04 Aligned_cols=51 Identities=27% Similarity=0.598 Sum_probs=42.3
Q ss_pred CCCcccccccccccCC---------------CeeEEeCCCCcccHhHHHHHHhcCCCCCcccccccc
Q 017521 153 CTSRTCAICLEDYSVG---------------EKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDAR 204 (370)
Q Consensus 153 ~~~~~C~ICLe~~~~~---------------~~v~~lpC~H~FH~~Ci~~Wl~~~~~~CP~CR~~i~ 204 (370)
.++..|+||++.|... ..++.++|+|.||..||+.||..+ .+||+||++..
T Consensus 35 ~~~d~CaIC~~~~~~~c~~C~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~-~~CP~Cr~~~~ 100 (106)
T 3dpl_R 35 IVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR-QVCPLDNREWE 100 (106)
T ss_dssp SCSCCCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHHHHHTTC-SBCSSSCSBCC
T ss_pred CCCCCCccCChhHhCcCchhhccccccCCccceEeecccCcEECHHHHHHHHHcC-CcCcCCCCcce
Confidence 3567899999999754 136788999999999999999984 45999999753
No 15
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=99.31 E-value=7.7e-13 Score=97.26 Aligned_cols=51 Identities=25% Similarity=0.620 Sum_probs=43.4
Q ss_pred CcccccccccccCC----CeeEEeCCCCcccHhHHHHHHhcCCCCCcccccccccC
Q 017521 155 SRTCAICLEDYSVG----EKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTS 206 (370)
Q Consensus 155 ~~~C~ICLe~~~~~----~~v~~lpC~H~FH~~Ci~~Wl~~~~~~CP~CR~~i~~~ 206 (370)
...|+||++.|... +.+..++|||.||..||+.|+..+ ..||+||..+...
T Consensus 3 ~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~-~~CP~Cr~~~~~~ 57 (64)
T 2xeu_A 3 MVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNA-NTCPTCRKKINHK 57 (64)
T ss_dssp CCBCTTTCCBHHHHHHTTCCEEEETTSCEEEHHHHHHHHHHC-SBCTTTCCBCTTT
T ss_pred CCCCCccChhhhCccccCCCEEeCCCCCchhHHHHHHHHHcC-CCCCCCCccCCcc
Confidence 57899999999753 556888999999999999999984 4699999988754
No 16
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.28 E-value=1.2e-12 Score=98.48 Aligned_cols=50 Identities=30% Similarity=0.834 Sum_probs=42.6
Q ss_pred CCcccccccccccCCCeeEEeCCCCcccHhHHHHHHhcCCCCCcccccccccCCC
Q 017521 154 TSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTSTG 208 (370)
Q Consensus 154 ~~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~~~~~CP~CR~~i~~~~~ 208 (370)
+...|+||++.+.. ..++|+|.||..||..|+.. +..||+||..+.....
T Consensus 14 ~~~~C~IC~~~~~~----~~~~CgH~fc~~Ci~~~~~~-~~~CP~Cr~~~~~~~~ 63 (70)
T 2ecn_A 14 DEEECCICMDGRAD----LILPCAHSFCQKCIDKWSDR-HRNCPICRLQMTGANE 63 (70)
T ss_dssp CCCCCSSSCCSCCS----EEETTTEEECHHHHHHSSCC-CSSCHHHHHCTTCCCC
T ss_pred CCCCCeeCCcCccC----cccCCCCcccHHHHHHHHHC-cCcCCCcCCcccCCCc
Confidence 45789999999875 77899999999999999996 4459999998876543
No 17
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.27 E-value=4.9e-12 Score=95.84 Aligned_cols=53 Identities=21% Similarity=0.356 Sum_probs=43.1
Q ss_pred CCcccccccccccCCCeeEEeCCCCcccHhHHHHHHhcCCCCCcccccccccCCCC
Q 017521 154 TSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTSTGE 209 (370)
Q Consensus 154 ~~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~~~~~CP~CR~~i~~~~~~ 209 (370)
+...|+||++.|.+. +..++|+|.||..||..|+... ..||+||..+......
T Consensus 14 ~~~~C~IC~~~~~~p--~~~~~CgH~fC~~Ci~~~~~~~-~~CP~Cr~~~~~~~~~ 66 (72)
T 2djb_A 14 PYILCSICKGYLIDA--TTITECLHTFCKSCIVRHFYYS-NRCPKCNIVVHQTQPL 66 (72)
T ss_dssp GGGSCTTTSSCCSSC--EECSSSCCEECHHHHHHHHHHC-SSCTTTCCCCCSSCSC
T ss_pred CCCCCCCCChHHHCc--CEECCCCCHHHHHHHHHHHHcC-CcCCCcCcccCccccc
Confidence 357899999998763 4445999999999999999874 4599999998775443
No 18
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.25 E-value=1.2e-12 Score=98.97 Aligned_cols=50 Identities=30% Similarity=0.589 Sum_probs=42.2
Q ss_pred CCcccccccccccCCCeeEEeCCCCcccHhHHHHHHhcCCCCCcccccccccCC
Q 017521 154 TSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTST 207 (370)
Q Consensus 154 ~~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~~~~~CP~CR~~i~~~~ 207 (370)
+...|+||++.+.+. ..++|+|.||..||..|+... ..||+||..+....
T Consensus 14 ~~~~C~IC~~~~~~~---~~~~CgH~fC~~Ci~~~~~~~-~~CP~Cr~~~~~~~ 63 (71)
T 2d8t_A 14 TVPECAICLQTCVHP---VSLPCKHVFCYLCVKGASWLG-KRCALCRQEIPEDF 63 (71)
T ss_dssp SCCBCSSSSSBCSSE---EEETTTEEEEHHHHHHCTTCS-SBCSSSCCBCCHHH
T ss_pred CCCCCccCCcccCCC---EEccCCCHHHHHHHHHHHHCC-CcCcCcCchhCHhh
Confidence 457899999998653 678999999999999999875 45999999887643
No 19
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.24 E-value=5.9e-12 Score=98.48 Aligned_cols=53 Identities=26% Similarity=0.655 Sum_probs=44.8
Q ss_pred CCcccccccccccCCCe-eEEeCCCCcccHhHHHHHHhcC--CCCCcccccccccC
Q 017521 154 TSRTCAICLEDYSVGEK-LRILPCRHKFHAFCVDSWLTSW--RTFCPVCKRDARTS 206 (370)
Q Consensus 154 ~~~~C~ICLe~~~~~~~-v~~lpC~H~FH~~Ci~~Wl~~~--~~~CP~CR~~i~~~ 206 (370)
+...|+||++.|...+. .+.++|||.||..||..|+... ...||+||..+...
T Consensus 14 ~~~~C~IC~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~ 69 (88)
T 2ct2_A 14 EVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSINGVRCPFCSKITRIT 69 (88)
T ss_dssp SCCBCTTTCCBCCTTSSCEEECSSSCEEEHHHHHHHHHHCSSCBCCTTTCCCBCCS
T ss_pred CCCCCccCCccccccCCCeEECCCCChhhHHHHHHHHHcCCCCcCCCCCCCcccch
Confidence 45789999999987664 6788999999999999999874 35699999987654
No 20
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=99.24 E-value=5.2e-12 Score=94.27 Aligned_cols=49 Identities=37% Similarity=0.815 Sum_probs=41.7
Q ss_pred CcccccccccccCCCeeEEeCCCCcccHhHHHHHHhcCCCCCcccccccccC
Q 017521 155 SRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTS 206 (370)
Q Consensus 155 ~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~~~~~CP~CR~~i~~~ 206 (370)
...|+||++.+.. .++.++|+|.||..||..|+..+. .||+||..+...
T Consensus 5 ~~~C~IC~~~~~~--~~~~~~C~H~fc~~Ci~~~~~~~~-~CP~Cr~~~~~~ 53 (68)
T 1chc_A 5 AERCPICLEDPSN--YSMALPCLHAFCYVCITRWIRQNP-TCPLCKVPVESV 53 (68)
T ss_dssp CCCCSSCCSCCCS--CEEETTTTEEESTTHHHHHHHHSC-STTTTCCCCCCE
T ss_pred CCCCeeCCccccC--CcEecCCCCeeHHHHHHHHHhCcC-cCcCCChhhHhh
Confidence 4689999999864 357899999999999999999854 599999988643
No 21
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.21 E-value=6.6e-12 Score=93.42 Aligned_cols=50 Identities=20% Similarity=0.454 Sum_probs=41.6
Q ss_pred CCcccccccccccCCCeeEEeCCCCcccHhHHHHHHhcCCCCCcccccccccC
Q 017521 154 TSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTS 206 (370)
Q Consensus 154 ~~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~~~~~CP~CR~~i~~~ 206 (370)
+...|+||++.+.+. ..++|||.||..||..|+...+..||+||..+...
T Consensus 14 ~~~~C~IC~~~~~~p---~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~ 63 (66)
T 2ecy_A 14 DKYKCEKCHLVLCSP---KQTECGHRFCESCMAALLSSSSPKCTACQESIVKD 63 (66)
T ss_dssp CCEECTTTCCEESSC---CCCSSSCCCCHHHHHHHHTTSSCCCTTTCCCCCTT
T ss_pred cCCCCCCCChHhcCe---eECCCCCHHHHHHHHHHHHhCcCCCCCCCcCCChh
Confidence 357899999999765 34799999999999999965455699999988754
No 22
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=99.21 E-value=2.5e-12 Score=107.11 Aligned_cols=52 Identities=29% Similarity=0.659 Sum_probs=1.9
Q ss_pred cCCCcccccccccccCC-------------Ce--eEEeCCCCcccHhHHHHHHhcCCCCCcccccccc
Q 017521 152 NCTSRTCAICLEDYSVG-------------EK--LRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDAR 204 (370)
Q Consensus 152 ~~~~~~C~ICLe~~~~~-------------~~--v~~lpC~H~FH~~Ci~~Wl~~~~~~CP~CR~~i~ 204 (370)
+.+++.|+||+++|... ++ +..++|+|.||..||++||..+. +||+||++..
T Consensus 45 d~~~d~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~~CI~~Wl~~~~-~CP~Cr~~~~ 111 (117)
T 4a0k_B 45 DIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQ-VCPLDNREWE 111 (117)
T ss_dssp CCCC----------------------------------------------------------------
T ss_pred cCCCCcCeECChhhcCcChhhhcccccccccccccccCCcCceEcHHHHHHHHHcCC-cCCCCCCeee
Confidence 33567999999999752 22 33458999999999999999854 5999999754
No 23
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.19 E-value=1.1e-11 Score=93.68 Aligned_cols=50 Identities=26% Similarity=0.540 Sum_probs=41.2
Q ss_pred CCcccccccccccCCCeeEEeCCCCcccHhHHHHHHhc--CCCCCcccccccccC
Q 017521 154 TSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTS--WRTFCPVCKRDARTS 206 (370)
Q Consensus 154 ~~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~--~~~~CP~CR~~i~~~ 206 (370)
+...|+||++.|.+ ...++|+|.||..||..|++. .+..||+||..+...
T Consensus 19 ~~~~C~IC~~~~~~---~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~ 70 (73)
T 2ysl_A 19 EEVICPICLDILQK---PVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVRKN 70 (73)
T ss_dssp CCCBCTTTCSBCSS---EEECTTCCEEEHHHHHHHCSSSCSCCCCSSSCCCCCCC
T ss_pred cCCEeccCCcccCC---eEEcCCCChhhHHHHHHHHHcCCCCCCCCCCCCcCCcc
Confidence 45799999999874 356799999999999999973 345699999988654
No 24
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=99.17 E-value=1.6e-11 Score=91.01 Aligned_cols=53 Identities=26% Similarity=0.503 Sum_probs=42.8
Q ss_pred Ccccccccc-cccCCCe-eEEeCCCCcccHhHHHHHHhcCCCCCcccccccccCC
Q 017521 155 SRTCAICLE-DYSVGEK-LRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTST 207 (370)
Q Consensus 155 ~~~C~ICLe-~~~~~~~-v~~lpC~H~FH~~Ci~~Wl~~~~~~CP~CR~~i~~~~ 207 (370)
...|+||++ .|..... +..++|||.||..||+.|+.+.+..||+||..+....
T Consensus 3 ~~~C~IC~~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~ 57 (65)
T 1g25_A 3 DQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRGAGNCPECGTPLRKSN 57 (65)
T ss_dssp TTCCSTTTTHHHHCSSCCEEECTTCCCEEHHHHHHHHHTTSSSCTTTCCCCSSCC
T ss_pred CCcCCcCCCCccCCCccCeecCCCCCHhHHHHHHHHHHcCCCcCCCCCCcccccc
Confidence 468999999 7766543 3567999999999999998775667999999887543
No 25
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=99.16 E-value=2.6e-11 Score=92.41 Aligned_cols=49 Identities=20% Similarity=0.573 Sum_probs=40.5
Q ss_pred CCcccccccccccCCCeeEEeC-CCCcccHhHHHHHHhcCC-CCCccccccccc
Q 017521 154 TSRTCAICLEDYSVGEKLRILP-CRHKFHAFCVDSWLTSWR-TFCPVCKRDART 205 (370)
Q Consensus 154 ~~~~C~ICLe~~~~~~~v~~lp-C~H~FH~~Ci~~Wl~~~~-~~CP~CR~~i~~ 205 (370)
+...|+||++.|.+. ..++ |+|.||..||..|+.... ..||+||+.+..
T Consensus 14 ~~~~C~IC~~~~~~p---~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~~~~ 64 (74)
T 2yur_A 14 DELLCLICKDIMTDA---VVIPCCGNSYCDECIRTALLESDEHTCPTCHQNDVS 64 (74)
T ss_dssp GGGSCSSSCCCCTTC---EECSSSCCEECTTHHHHHHHHSSSSCCSSSCCSSCC
T ss_pred CCCCCcCCChHHhCC---eEcCCCCCHHHHHHHHHHHHhcCCCcCCCCCCcCCC
Confidence 457899999999865 5689 999999999999998742 469999996543
No 26
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.16 E-value=1.6e-11 Score=94.98 Aligned_cols=47 Identities=21% Similarity=0.506 Sum_probs=40.2
Q ss_pred CCcccccccccccCCCeeEEeCCCCcccHhHHHHHHhcCCCCCcccccccc
Q 017521 154 TSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDAR 204 (370)
Q Consensus 154 ~~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~~~~~CP~CR~~i~ 204 (370)
....|+||++.|... .+++|+|.||..||..|+... ..||+||..+.
T Consensus 14 ~~~~C~IC~~~~~~p---~~~~CgH~fC~~Ci~~~~~~~-~~CP~Cr~~~~ 60 (81)
T 2csy_A 14 IPFRCFICRQAFQNP---VVTKCRHYFCESCALEHFRAT-PRCYICDQPTG 60 (81)
T ss_dssp CCSBCSSSCSBCCSE---EECTTSCEEEHHHHHHHHHHC-SBCSSSCCBCC
T ss_pred CCCCCcCCCchhcCe---eEccCCCHhHHHHHHHHHHCC-CcCCCcCcccc
Confidence 457899999998653 468999999999999999874 45999999885
No 27
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.14 E-value=2.8e-11 Score=92.72 Aligned_cols=53 Identities=23% Similarity=0.486 Sum_probs=42.9
Q ss_pred CcccccccccccCCCeeEEeCCCCcccHhHHHHHHhcC-CCCCcccccccccCCCC
Q 017521 155 SRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSW-RTFCPVCKRDARTSTGE 209 (370)
Q Consensus 155 ~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~~-~~~CP~CR~~i~~~~~~ 209 (370)
...|+||++.+..++++. .|+|.||..||++||+.+ +.+||+||++.....++
T Consensus 15 i~~C~IC~~~i~~g~~C~--~C~h~fH~~Ci~kWl~~~~~~~CP~Cr~~w~~~~~~ 68 (74)
T 2ct0_A 15 VKICNICHSLLIQGQSCE--TCGIRMHLPCVAKYFQSNAEPRCPHCNDYWPHEIPK 68 (74)
T ss_dssp SCBCSSSCCBCSSSEECS--SSCCEECHHHHHHHSTTCSSCCCTTTCSCCCSCCCC
T ss_pred CCcCcchhhHcccCCccC--CCCchhhHHHHHHHHHhcCCCCCCCCcCcCCCCCCC
Confidence 478999999998775443 899999999999999875 25699999887655443
No 28
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=99.12 E-value=3.8e-11 Score=92.04 Aligned_cols=50 Identities=18% Similarity=0.337 Sum_probs=42.2
Q ss_pred CCcccccccccccCCCeeEEeCCCCcccHhHHHHHHhcCCCCCcccccccccC
Q 017521 154 TSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTS 206 (370)
Q Consensus 154 ~~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~~~~~CP~CR~~i~~~ 206 (370)
+...|+||++.|.+. ..++|||.||..||..|+...+..||+||..+...
T Consensus 7 ~~~~C~IC~~~~~~P---v~~~CgH~fc~~Ci~~~~~~~~~~CP~C~~~~~~~ 56 (78)
T 1t1h_A 7 EYFRCPISLELMKDP---VIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHA 56 (78)
T ss_dssp SSSSCTTTSCCCSSE---EEETTTEEEEHHHHHHHHTTTCCBCTTTCCBCSSC
T ss_pred ccCCCCCccccccCC---EEcCCCCeecHHHHHHHHHHCcCCCCCCcCCCChh
Confidence 457999999998754 56799999999999999987456699999988653
No 29
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.10 E-value=6.2e-11 Score=87.18 Aligned_cols=43 Identities=26% Similarity=0.561 Sum_probs=36.3
Q ss_pred CCcccccccccccCCCeeEEeCCCCcccHhHHHHHHhc--CCCCCccc
Q 017521 154 TSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTS--WRTFCPVC 199 (370)
Q Consensus 154 ~~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~--~~~~CP~C 199 (370)
+...|+||++.|.+. ++++|||.||..||..|++. .+..||+|
T Consensus 19 ~~~~C~IC~~~~~~p---~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~C 63 (63)
T 2ysj_A 19 EEVICPICLDILQKP---VTIDCGHNFCLKCITQIGETSCGFFKCPLC 63 (63)
T ss_dssp CCCBCTTTCSBCSSC---EECTTSSEECHHHHHHHHHHCSSCCCCSCC
T ss_pred cCCCCCcCCchhCCe---EEeCCCCcchHHHHHHHHHcCCCCCcCcCC
Confidence 457899999999864 56799999999999999984 34569998
No 30
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.09 E-value=8.3e-11 Score=90.93 Aligned_cols=50 Identities=30% Similarity=0.521 Sum_probs=42.0
Q ss_pred CCcccccccccccCCCeeEEeCCCCcccHhHHHHHHhcC-----CCCCcccccccccC
Q 017521 154 TSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSW-----RTFCPVCKRDARTS 206 (370)
Q Consensus 154 ~~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~~-----~~~CP~CR~~i~~~ 206 (370)
+...|+||++.|... ..++|+|.||..||..|+... ...||+||..+...
T Consensus 18 ~~~~C~IC~~~~~~p---~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~~ 72 (85)
T 2ecw_A 18 EEVTCPICLELLKEP---VSADCNHSFCRACITLNYESNRNTDGKGNCPVCRVPYPFG 72 (85)
T ss_dssp TTTSCTTTCSCCSSC---EECTTSCCBCHHHHHHHHHHSBCTTSCBCCTTTCCCCCTT
T ss_pred cCCCCcCCChhhCcc---eeCCCCCHHHHHHHHHHHHhccCCCCCCCCCCCCCcCCHH
Confidence 457899999998765 478999999999999999872 45699999987653
No 31
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=99.09 E-value=3.6e-11 Score=102.61 Aligned_cols=47 Identities=30% Similarity=0.890 Sum_probs=40.1
Q ss_pred CcccccccccccCCCeeEEeCCCCcccHhHHHHHHhcCCCCCccccccccc
Q 017521 155 SRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDART 205 (370)
Q Consensus 155 ~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~~~~~CP~CR~~i~~ 205 (370)
...|+||++.|... +.+||||.||..||..|+..+. .||+||.++..
T Consensus 53 ~~~C~iC~~~~~~~---~~~~CgH~fc~~Ci~~~~~~~~-~CP~Cr~~~~~ 99 (138)
T 4ayc_A 53 ELQCIICSEYFIEA---VTLNCAHSFCSYCINEWMKRKI-ECPICRKDIKS 99 (138)
T ss_dssp HSBCTTTCSBCSSE---EEETTSCEEEHHHHHHHTTTCS-BCTTTCCBCCC
T ss_pred cCCCcccCcccCCc---eECCCCCCccHHHHHHHHHcCC-cCCCCCCcCCC
Confidence 35799999998753 6789999999999999998754 59999998754
No 32
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=99.08 E-value=4.5e-11 Score=96.50 Aligned_cols=50 Identities=26% Similarity=0.542 Sum_probs=41.8
Q ss_pred CcccccccccccCCCeeEEeCCCCcccHhHHHHHHhcCCCCCcccccccccC
Q 017521 155 SRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTS 206 (370)
Q Consensus 155 ~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~~~~~CP~CR~~i~~~ 206 (370)
...|+||++.|.. .+..++|||.||..||..|+...+..||+||..+...
T Consensus 22 ~~~C~IC~~~~~~--p~~~~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~~~~~~ 71 (100)
T 3lrq_A 22 VFRCFICMEKLRD--ARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQLR 71 (100)
T ss_dssp HTBCTTTCSBCSS--EEECTTTCCEEEHHHHHHHHHHTCSBCTTTCCBCCGG
T ss_pred CCCCccCCccccC--ccccCCCCChhhHHHHHHHHHHCcCCCCCCCCcCCHH
Confidence 4689999999874 3444899999999999999998645699999988643
No 33
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=99.07 E-value=4.6e-11 Score=99.92 Aligned_cols=53 Identities=25% Similarity=0.605 Sum_probs=44.4
Q ss_pred CCcccccccccccCC----CeeEEeCCCCcccHhHHHHHHhcCCCCCcccccccccCC
Q 017521 154 TSRTCAICLEDYSVG----EKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTST 207 (370)
Q Consensus 154 ~~~~C~ICLe~~~~~----~~v~~lpC~H~FH~~Ci~~Wl~~~~~~CP~CR~~i~~~~ 207 (370)
+...|+||++.|.+. +.++.++|||.||..||+.|++.++ .||+||+.+....
T Consensus 6 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~-~CP~Cr~~~~~~~ 62 (133)
T 4ap4_A 6 GTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNAN-TCPTCRKKINHKR 62 (133)
T ss_dssp CSCBCTTTCCBHHHHHHTTCCEEEETTCCEEEHHHHHHHHTTCS-BCTTTCCBCTTTC
T ss_pred CCCCCcccChhhhCccccccCeEecCCCChhhHHHHHHHHHhCC-CCCCCCCcCcccc
Confidence 357899999999753 5668899999999999999999855 5999999886543
No 34
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.06 E-value=6.7e-11 Score=85.22 Aligned_cols=43 Identities=33% Similarity=0.842 Sum_probs=35.9
Q ss_pred CCcccccccccccCCCeeEEeCCCCcccHhHHHHHHhc--CCCCCccc
Q 017521 154 TSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTS--WRTFCPVC 199 (370)
Q Consensus 154 ~~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~--~~~~CP~C 199 (370)
+...|+||++.|.+. +.++|+|.||..||..|+.. .+..||+|
T Consensus 14 ~~~~C~IC~~~~~~p---~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~C 58 (58)
T 2ecj_A 14 VEASCSVCLEYLKEP---VIIECGHNFCKACITRWWEDLERDFPCPVC 58 (58)
T ss_dssp CCCBCSSSCCBCSSC---CCCSSCCCCCHHHHHHHTTSSCCSCCCSCC
T ss_pred cCCCCccCCcccCcc---EeCCCCCccCHHHHHHHHHhcCCCCCCCCC
Confidence 457899999999865 45899999999999999654 45569998
No 35
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.06 E-value=1e-10 Score=90.43 Aligned_cols=50 Identities=30% Similarity=0.585 Sum_probs=41.5
Q ss_pred CCcccccccccccCCCeeEEeCCCCcccHhHHHHHHhc-----CCCCCcccccccccC
Q 017521 154 TSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTS-----WRTFCPVCKRDARTS 206 (370)
Q Consensus 154 ~~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~-----~~~~CP~CR~~i~~~ 206 (370)
+...|+||++.|... ..++|+|.||..||..|+.. ....||+||..+...
T Consensus 18 ~~~~C~IC~~~~~~p---~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~~ 72 (85)
T 2ecv_A 18 EEVTCPICLELLTQP---LSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQPE 72 (85)
T ss_dssp CCCCCTTTCSCCSSC---BCCSSSCCBCTTHHHHHHHHHHHTTSCCCCTTTCCSSCSS
T ss_pred CCCCCCCCCcccCCc---eeCCCCCHHHHHHHHHHHHHhhcCCCCCcCCCCCCccCHH
Confidence 457899999998764 45799999999999999986 244699999988753
No 36
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=99.05 E-value=2.7e-11 Score=92.80 Aligned_cols=49 Identities=29% Similarity=0.511 Sum_probs=41.1
Q ss_pred CCcccccccccccCCCeeEEeCCCCcccHhHHHHHHhcC------CCCCccccccccc
Q 017521 154 TSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSW------RTFCPVCKRDART 205 (370)
Q Consensus 154 ~~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~~------~~~CP~CR~~i~~ 205 (370)
+...|+||++.|.+. +.++|||.||..||..|+... ...||+||..+..
T Consensus 11 ~~~~C~IC~~~~~~p---~~l~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~~~ 65 (79)
T 2egp_A 11 EEVTCPICLELLTEP---LSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSF 65 (79)
T ss_dssp CCCEETTTTEECSSC---CCCSSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCCCS
T ss_pred cCCCCcCCCcccCCe---eECCCCCHHHHHHHHHHHHhcccCCCCCCcCCCCCCcCCH
Confidence 457899999999764 457999999999999999862 4569999998865
No 37
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=99.03 E-value=1.7e-10 Score=96.51 Aligned_cols=48 Identities=23% Similarity=0.411 Sum_probs=41.3
Q ss_pred CcccccccccccCCCeeEEeCCCCcccHhHHHHHHhcCCCCCccccccccc
Q 017521 155 SRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDART 205 (370)
Q Consensus 155 ~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~~~~~CP~CR~~i~~ 205 (370)
...|+||++.|... ..++|||.||..||..|+......||+||..+..
T Consensus 52 ~~~C~IC~~~~~~p---~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 99 (124)
T 3fl2_A 52 TFQCICCQELVFRP---ITTVCQHNVCKDCLDRSFRAQVFSCPACRYDLGR 99 (124)
T ss_dssp HTBCTTTSSBCSSE---EECTTSCEEEHHHHHHHHHTTCCBCTTTCCBCCT
T ss_pred CCCCCcCChHHcCc---EEeeCCCcccHHHHHHHHhHCcCCCCCCCccCCC
Confidence 46899999999854 5679999999999999998655579999998865
No 38
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=99.01 E-value=2.2e-10 Score=90.58 Aligned_cols=49 Identities=20% Similarity=0.547 Sum_probs=40.8
Q ss_pred CCCcccccccccccCCCeeEEeC-CCCcccHhHHHHHHhcC-CCCCcccccccc
Q 017521 153 CTSRTCAICLEDYSVGEKLRILP-CRHKFHAFCVDSWLTSW-RTFCPVCKRDAR 204 (370)
Q Consensus 153 ~~~~~C~ICLe~~~~~~~v~~lp-C~H~FH~~Ci~~Wl~~~-~~~CP~CR~~i~ 204 (370)
.+...|+||++.|.+. ..++ |||.||..||..|+... ...||+||..+.
T Consensus 11 ~~~~~C~IC~~~~~~p---~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~~~ 61 (92)
T 3ztg_A 11 PDELLCLICKDIMTDA---VVIPCCGNSYCDECIRTALLESDEHTCPTCHQNDV 61 (92)
T ss_dssp CTTTEETTTTEECSSC---EECTTTCCEECHHHHHHHHHHCTTCCCTTTCCSSC
T ss_pred CcCCCCCCCChhhcCc---eECCCCCCHHHHHHHHHHHHhcCCCcCcCCCCcCC
Confidence 3457999999999865 6789 99999999999999763 356999998863
No 39
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=99.00 E-value=1.4e-10 Score=96.89 Aligned_cols=52 Identities=27% Similarity=0.689 Sum_probs=43.7
Q ss_pred CCcccccccccccC----CCeeEEeCCCCcccHhHHHHHHhcCCCCCcccccccccC
Q 017521 154 TSRTCAICLEDYSV----GEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTS 206 (370)
Q Consensus 154 ~~~~C~ICLe~~~~----~~~v~~lpC~H~FH~~Ci~~Wl~~~~~~CP~CR~~i~~~ 206 (370)
+...|+||++.|.. ++.+..++|||.||..||++|++..+ +||+||..+...
T Consensus 71 ~~~~C~iC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~-~CP~Cr~~~~~~ 126 (133)
T 4ap4_A 71 GTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNAN-TCPTCRKKINHK 126 (133)
T ss_dssp SSCBCTTTCCBHHHHHHTTCCEEEETTSBEEEHHHHHHHHHHCS-BCTTTCCBCCGG
T ss_pred CCCCCCCCCCccccccccCcceEeCCCCChhhHHHHHHHHHcCC-CCCCCCCcCChh
Confidence 35789999999875 34457889999999999999999855 599999988764
No 40
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=98.97 E-value=2.4e-10 Score=91.67 Aligned_cols=48 Identities=27% Similarity=0.735 Sum_probs=39.8
Q ss_pred CcccccccccccCCCeeEEeCCCCcccHhHHHHHHhcCCCCCccccccccc
Q 017521 155 SRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDART 205 (370)
Q Consensus 155 ~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~~~~~CP~CR~~i~~ 205 (370)
...|+||++.|... +..++|||.||..||..|+... ..||+||..+..
T Consensus 22 ~~~C~IC~~~~~~p--~~~~~CgH~fC~~Ci~~~~~~~-~~CP~Cr~~~~~ 69 (99)
T 2y43_A 22 LLRCGICFEYFNIA--MIIPQCSHNYCSLCIRKFLSYK-TQCPTCCVTVTE 69 (99)
T ss_dssp HTBCTTTCSBCSSE--EECTTTCCEEEHHHHHHHHTTC-CBCTTTCCBCCG
T ss_pred CCCcccCChhhCCc--CEECCCCCHhhHHHHHHHHHCC-CCCCCCCCcCCh
Confidence 36899999998753 4444899999999999999974 469999998765
No 41
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=98.97 E-value=2.9e-10 Score=99.64 Aligned_cols=49 Identities=29% Similarity=0.609 Sum_probs=41.4
Q ss_pred CcccccccccccCCCeeEEeCCCCcccHhHHHHHHhcCCCCCccccccccc
Q 017521 155 SRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDART 205 (370)
Q Consensus 155 ~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~~~~~CP~CR~~i~~ 205 (370)
...|+||++.|.. .+..++|||.||..||+.|+...+..||+||..+..
T Consensus 54 ~~~C~IC~~~~~~--p~~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 102 (165)
T 2ckl_B 54 ELMCPICLDMLKN--TMTTKECLHRFCADCIITALRSGNKECPTCRKKLVS 102 (165)
T ss_dssp HHBCTTTSSBCSS--EEEETTTCCEEEHHHHHHHHHTTCCBCTTTCCBCCS
T ss_pred CCCCcccChHhhC--cCEeCCCCChhHHHHHHHHHHhCcCCCCCCCCcCCC
Confidence 4689999999875 455559999999999999999755669999998854
No 42
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=98.95 E-value=3.3e-10 Score=92.39 Aligned_cols=49 Identities=22% Similarity=0.657 Sum_probs=40.9
Q ss_pred CcccccccccccCCCeeEEeCCCCcccHhHHHHHHhcCCCCCcccccccccC
Q 017521 155 SRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTS 206 (370)
Q Consensus 155 ~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~~~~~CP~CR~~i~~~ 206 (370)
...|+||++.|.+ .+..++|||.||..||..|+... ..||+||..+...
T Consensus 15 ~~~C~IC~~~~~~--p~~~~~CgH~fC~~Ci~~~~~~~-~~CP~Cr~~~~~~ 63 (108)
T 2ckl_A 15 HLMCVLCGGYFID--ATTIIECLHSFCKTCIVRYLETS-KYCPICDVQVHKT 63 (108)
T ss_dssp GTBCTTTSSBCSS--EEEETTTCCEEEHHHHHHHHTSC-SBCTTTCCBSCSS
T ss_pred cCCCccCChHHhC--cCEeCCCCChhhHHHHHHHHHhC-CcCcCCCcccccc
Confidence 5789999999875 45445999999999999999985 5599999987653
No 43
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=98.95 E-value=4.6e-10 Score=97.32 Aligned_cols=49 Identities=22% Similarity=0.399 Sum_probs=42.0
Q ss_pred CcccccccccccCCCeeEEeCCCCcccHhHHHHHHhcCCCCCcccccccccC
Q 017521 155 SRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTS 206 (370)
Q Consensus 155 ~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~~~~~CP~CR~~i~~~ 206 (370)
...|+||++.|... .+++|+|.||..||..|+......||+||..+...
T Consensus 78 ~~~C~IC~~~~~~p---v~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~ 126 (150)
T 1z6u_A 78 SFMCVCCQELVYQP---VTTECFHNVCKDCLQRSFKAQVFSCPACRHDLGQN 126 (150)
T ss_dssp HTBCTTTSSBCSSE---EECTTSCEEEHHHHHHHHHTTCCBCTTTCCBCCTT
T ss_pred CCEeecCChhhcCC---EEcCCCCchhHHHHHHHHHhCCCcCCCCCccCCCC
Confidence 36899999998754 55899999999999999997555699999988765
No 44
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=98.92 E-value=1.1e-09 Score=84.55 Aligned_cols=53 Identities=21% Similarity=0.621 Sum_probs=41.8
Q ss_pred CCcccccccccccCCCeeEEeC--CCCcccHhHHHHHHhcCCCCCcccccccccCC
Q 017521 154 TSRTCAICLEDYSVGEKLRILP--CRHKFHAFCVDSWLTSWRTFCPVCKRDARTST 207 (370)
Q Consensus 154 ~~~~C~ICLe~~~~~~~v~~lp--C~H~FH~~Ci~~Wl~~~~~~CP~CR~~i~~~~ 207 (370)
+...|+||++.+...+. +.+| |||.||..|+..|+......||+||+.+....
T Consensus 10 ~~~~CpICle~~~~~d~-~~~p~~CGH~fC~~Cl~~~~~~~~~~CP~CR~~~~~~~ 64 (78)
T 1e4u_A 10 DPVECPLCMEPLEIDDI-NFFPCTCGYQICRFCWHRIRTDENGLCPACRKPYPEDP 64 (78)
T ss_dssp CCCBCTTTCCBCCTTTT-TCCSSTTSCCCCHHHHHHHTTSSCSBCTTTCCBCSSCS
T ss_pred cCCcCCccCccCccccc-cccccCCCCCcCHHHHHHHHhcCCCCCCCCCCccCCCc
Confidence 45789999999865432 3444 99999999999998665567999999887654
No 45
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.91 E-value=5.5e-10 Score=91.16 Aligned_cols=49 Identities=33% Similarity=0.648 Sum_probs=40.5
Q ss_pred CcccccccccccCCCeeEEeCCCCcccHhHHHHHHhcCC--CCCcccccccccC
Q 017521 155 SRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWR--TFCPVCKRDARTS 206 (370)
Q Consensus 155 ~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~~~--~~CP~CR~~i~~~ 206 (370)
...|+||++.|... ..++|||.||..||..|+.... ..||+||..+...
T Consensus 21 ~~~C~IC~~~~~~p---~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~ 71 (112)
T 1jm7_A 21 ILECPICLELIKEP---VSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKR 71 (112)
T ss_dssp HTSCSSSCCCCSSC---CBCTTSCCCCSHHHHHHHHSSSSSCCCTTTSCCCCTT
T ss_pred CCCCcccChhhcCe---EECCCCCHHHHHHHHHHHHhCCCCCCCcCCCCcCCHh
Confidence 36899999998765 4579999999999999998643 3599999987754
No 46
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=98.91 E-value=2.3e-10 Score=94.32 Aligned_cols=48 Identities=29% Similarity=0.648 Sum_probs=41.3
Q ss_pred CcccccccccccCCCeeEEeCCCCcccHhHHHHHHhcCCCCCccccccccc
Q 017521 155 SRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDART 205 (370)
Q Consensus 155 ~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~~~~~CP~CR~~i~~ 205 (370)
...|+||++.|... +.|+|||.||..||..|+...+..||+||..+..
T Consensus 15 ~~~C~iC~~~~~~p---~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 62 (115)
T 3l11_A 15 ECQCGICMEILVEP---VTLPCNHTLCKPCFQSTVEKASLCCPFCRRRVSS 62 (115)
T ss_dssp HHBCTTTCSBCSSC---EECTTSCEECHHHHCCCCCTTTSBCTTTCCBCHH
T ss_pred CCCCccCCcccCce---eEcCCCCHHhHHHHHHHHhHCcCCCCCCCcccCc
Confidence 46899999998754 6679999999999999998756679999998764
No 47
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=98.90 E-value=5.1e-10 Score=92.84 Aligned_cols=50 Identities=24% Similarity=0.456 Sum_probs=42.0
Q ss_pred CCcccccccccccCCCeeEEeCCCCcccHhHHHHHHhcCCCCCcccccccccC
Q 017521 154 TSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTS 206 (370)
Q Consensus 154 ~~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~~~~~CP~CR~~i~~~ 206 (370)
+...|+||++.|... ..++|||.||..||..|+......||+||..+...
T Consensus 17 ~~~~C~IC~~~~~~p---~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~ 66 (118)
T 3hct_A 17 SKYECPICLMALREA---VQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLEN 66 (118)
T ss_dssp GGGBCTTTCSBCSSE---EECTTSCEEEHHHHHHHHHHHCSBCTTTCCBCCGG
T ss_pred CCCCCCcCChhhcCe---EECCcCChhhHHHHHHHHhhCCCCCCCCCCCcCHH
Confidence 347899999998754 56799999999999999988554699999987653
No 48
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=98.89 E-value=8.4e-10 Score=91.04 Aligned_cols=50 Identities=24% Similarity=0.553 Sum_probs=41.8
Q ss_pred CcccccccccccCCCeeEEeCCCCcccHhHHHHHHhcCCCCCcccccccccCC
Q 017521 155 SRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTST 207 (370)
Q Consensus 155 ~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~~~~~CP~CR~~i~~~~ 207 (370)
...|+||++.|.+. ..++|||.||..||..|+......||+||..+....
T Consensus 23 ~~~C~IC~~~~~~p---~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~ 72 (116)
T 1rmd_A 23 SISCQICEHILADP---VETSCKHLFCRICILRCLKVMGSYCPSCRYPCFPTD 72 (116)
T ss_dssp HTBCTTTCSBCSSE---EECTTSCEEEHHHHHHHHHHTCSBCTTTCCBCCGGG
T ss_pred CCCCCCCCcHhcCc---EEcCCCCcccHHHHHHHHhHCcCcCCCCCCCCCHhh
Confidence 46899999998753 458999999999999999975556999999887643
No 49
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=98.82 E-value=7.4e-10 Score=95.07 Aligned_cols=49 Identities=22% Similarity=0.489 Sum_probs=41.4
Q ss_pred CCcccccccccccCCCeeEEeCCCCcccHhHHHHHHhcCCCCCccccccccc
Q 017521 154 TSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDART 205 (370)
Q Consensus 154 ~~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~~~~~CP~CR~~i~~ 205 (370)
+...|+||++.|.+. ..++|||.||..||..|+......||+||.++..
T Consensus 30 ~~~~C~IC~~~~~~p---v~~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~~~~~ 78 (141)
T 3knv_A 30 AKYLCSACRNVLRRP---FQAQCGHRYCSFCLASILSSGPQNCAACVHEGIY 78 (141)
T ss_dssp GGGBCTTTCSBCSSE---EECTTSCEEEHHHHHHHGGGSCEECHHHHHTTCC
T ss_pred cCcCCCCCChhhcCc---EECCCCCccCHHHHHHHHhcCCCCCCCCCCcccc
Confidence 357899999998765 5589999999999999998765569999998743
No 50
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.82 E-value=8.6e-10 Score=79.53 Aligned_cols=46 Identities=22% Similarity=0.582 Sum_probs=38.2
Q ss_pred CCcccccccccccCCCeeEEeCCCCcccHhHHHHHHhcCCCCCcccccccccC
Q 017521 154 TSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTS 206 (370)
Q Consensus 154 ~~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~~~~~CP~CR~~i~~~ 206 (370)
+...|+||++.|... +.|+|+|.||..||..| ...||+||+.+...
T Consensus 5 ~~~~C~IC~~~~~~p---~~l~CgH~fC~~Ci~~~----~~~CP~Cr~~~~~~ 50 (56)
T 1bor_A 5 QFLRCQQCQAEAKCP---KLLPCLHTLCSGCLEAS----GMQCPICQAPWPLG 50 (56)
T ss_dssp CCSSCSSSCSSCBCC---SCSTTSCCSBTTTCSSS----SSSCSSCCSSSSCC
T ss_pred cCCCceEeCCccCCe---EEcCCCCcccHHHHccC----CCCCCcCCcEeecC
Confidence 457899999999865 67899999999999884 34599999987654
No 51
>2vje_A E3 ubiquitin-protein ligase MDM2; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_A* 2hdp_A
Probab=98.81 E-value=1.6e-09 Score=80.31 Aligned_cols=47 Identities=23% Similarity=0.455 Sum_probs=38.2
Q ss_pred CcccccccccccCCCeeEEe--CCCCc-ccHhHHHHHHhcCCCCCccccccccc
Q 017521 155 SRTCAICLEDYSVGEKLRIL--PCRHK-FHAFCVDSWLTSWRTFCPVCKRDART 205 (370)
Q Consensus 155 ~~~C~ICLe~~~~~~~v~~l--pC~H~-FH~~Ci~~Wl~~~~~~CP~CR~~i~~ 205 (370)
+..|.||++.+.+. ..+ ||||. |+..|+..|.+.++ .||+||+++..
T Consensus 8 ~~~C~IC~~~~~~~---~~~~~pCgH~~~C~~C~~~~~~~~~-~CPiCR~~i~~ 57 (64)
T 2vje_A 8 IEPCVICQGRPKNG---CIVHGKTGHLMACFTCAKKLKKRNK-PCPVCRQPIQM 57 (64)
T ss_dssp GSCCTTTSSSCSCE---EEEETTEEEEEECHHHHHHHHHTTC-CCTTTCCCCCE
T ss_pred cCCCCcCCCCCCCE---EEECCCCCChhhHHHHHHHHHHcCC-cCCCcCcchhc
Confidence 46899999986543 344 99999 89999999998744 59999998754
No 52
>2y1n_A E3 ubiquitin-protein ligase; ligase-transferase complex, ubiquitin ring E3 ligase; HET: PTR; 2.00A {Homo sapiens} PDB: 2y1m_A* 4a4c_A* 4a4b_A* 1fbv_A* 3vgo_A 4a49_A* 2k4d_A 2ldr_A*
Probab=98.80 E-value=1.8e-09 Score=106.72 Aligned_cols=50 Identities=30% Similarity=0.698 Sum_probs=41.9
Q ss_pred CcccccccccccCCCeeEEeCCCCcccHhHHHHHHhcCCCCCcccccccccCC
Q 017521 155 SRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTST 207 (370)
Q Consensus 155 ~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~~~~~CP~CR~~i~~~~ 207 (370)
...|+||++.+.. ...+||||.||..|+..|+...+..||+||..+....
T Consensus 332 ~~~C~ICle~~~~---pv~lpCGH~FC~~Ci~~wl~~~~~~CP~CR~~i~~~~ 381 (389)
T 2y1n_A 332 FQLCKICAENDKD---VKIEPCGHLMCTSCLTSWQESEGQGCPFCRCEIKGTE 381 (389)
T ss_dssp SSBCTTTSSSBCC---EEEETTCCEECHHHHHHHHHHTCSBCTTTCCBCCEEE
T ss_pred CCCCCccCcCCCC---eEEeCCCChhhHHHHHHHHhcCCCCCCCCCCccCCce
Confidence 4689999999854 4789999999999999999844556999999887643
No 53
>2vje_B MDM4 protein; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_B*
Probab=98.75 E-value=3.3e-09 Score=78.43 Aligned_cols=49 Identities=18% Similarity=0.418 Sum_probs=38.2
Q ss_pred CcccccccccccCCCeeEEeCCCCc-ccHhHHHHHHhcCCCCCccccccccc
Q 017521 155 SRTCAICLEDYSVGEKLRILPCRHK-FHAFCVDSWLTSWRTFCPVCKRDART 205 (370)
Q Consensus 155 ~~~C~ICLe~~~~~~~v~~lpC~H~-FH~~Ci~~Wl~~~~~~CP~CR~~i~~ 205 (370)
...|.||++.+.+. .+..+||||. |+..|+..|.+.. ..||+||+++..
T Consensus 7 ~~~C~IC~~~~~~~-~~~~~pCgH~~~C~~C~~~~~~~~-~~CPiCR~~i~~ 56 (63)
T 2vje_B 7 LKPCSLCEKRPRDG-NIIHGRTGHLVTCFHCARRLKKAG-ASCPICKKEIQL 56 (63)
T ss_dssp GSBCTTTSSSBSCE-EEEETTEEEEEECHHHHHHHHHTT-CBCTTTCCBCCE
T ss_pred CCCCcccCCcCCCe-EEEecCCCCHhHHHHHHHHHHHhC-CcCCCcCchhhc
Confidence 47899999986542 1222399998 9999999998774 459999998854
No 54
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=98.72 E-value=7.3e-09 Score=81.15 Aligned_cols=49 Identities=10% Similarity=-0.063 Sum_probs=41.8
Q ss_pred CCcccccccccccCCCeeEEeCCCCcccHhHHHHHHhcCCCCCcccccccccC
Q 017521 154 TSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTS 206 (370)
Q Consensus 154 ~~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~~~~~CP~CR~~i~~~ 206 (370)
+...|+||++-|.+. .+++|||.|+..||..|+.. +.+||+||..+...
T Consensus 13 ~~~~CpI~~~~m~dP---V~~~cGhtf~r~~I~~~l~~-~~~cP~~~~~l~~~ 61 (85)
T 2kr4_A 13 DEFRDPLMDTLMTDP---VRLPSGTVMDRSIILRHLLN-SPTDPFNRQMLTES 61 (85)
T ss_dssp TTTBCTTTCSBCSSE---EECTTSCEEEHHHHHHHHHH-CSBCTTTCCBCCGG
T ss_pred hheECcccCchhcCC---eECCCCCEECHHHHHHHHhc-CCCCCCCcCCCChH
Confidence 458999999999875 67899999999999999997 45699999887643
No 55
>1wgm_A Ubiquitin conjugation factor E4A; ubiquitinating enzyme, KIAA0126, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.2
Probab=98.70 E-value=7.2e-09 Score=83.48 Aligned_cols=49 Identities=12% Similarity=-0.000 Sum_probs=41.9
Q ss_pred CCcccccccccccCCCeeEEeCCC-CcccHhHHHHHHhcCCCCCcccccccccC
Q 017521 154 TSRTCAICLEDYSVGEKLRILPCR-HKFHAFCVDSWLTSWRTFCPVCKRDARTS 206 (370)
Q Consensus 154 ~~~~C~ICLe~~~~~~~v~~lpC~-H~FH~~Ci~~Wl~~~~~~CP~CR~~i~~~ 206 (370)
+...|+||++-|++. ++++|| |.|+..||..|+.. +.+||+||..+...
T Consensus 21 ~~~~CpI~~~~m~dP---V~~~cG~htf~r~cI~~~l~~-~~~cP~~~~~l~~~ 70 (98)
T 1wgm_A 21 DEFLDPIMSTLMCDP---VVLPSSRVTVDRSTIARHLLS-DQTDPFNRSPLTMD 70 (98)
T ss_dssp TTTBCTTTCSBCSSE---EECTTTCCEEEHHHHHHHTTT-SCBCTTTCSBCCTT
T ss_pred HhcCCcCccccccCC---eECCCCCeEECHHHHHHHHHh-CCCCCCCCCCCChh
Confidence 357999999999865 568999 99999999999987 45699999987653
No 56
>2kre_A Ubiquitin conjugation factor E4 B; U-box domain, E3 ubiquitin ligase, E4 polyubiquitin chain EL factor, phosphoprotein, UBL conjugation pathway; NMR {Homo sapiens} PDB: 3l1x_A 3l1z_B
Probab=98.69 E-value=6.3e-09 Score=84.14 Aligned_cols=48 Identities=8% Similarity=-0.062 Sum_probs=41.6
Q ss_pred CCcccccccccccCCCeeEEeCCCCcccHhHHHHHHhcCCCCCccccccccc
Q 017521 154 TSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDART 205 (370)
Q Consensus 154 ~~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~~~~~CP~CR~~i~~ 205 (370)
+...|+||++-|.+. .+++|||.|+..||..|+.. +.+||+||..+..
T Consensus 28 ~~~~CpI~~~~m~dP---V~~~cGhtf~r~~I~~~l~~-~~~cP~~~~~l~~ 75 (100)
T 2kre_A 28 DEFRDPLMDTLMTDP---VRLPSGTIMDRSIILRHLLN-SPTDPFNRQTLTE 75 (100)
T ss_dssp TTTBCTTTCSBCSSE---EEETTTEEEEHHHHHHHTTS-CSBCSSSCCBCCT
T ss_pred HhhCCcCccCcccCC---eECCCCCEEchHHHHHHHHc-CCCCCCCCCCCCh
Confidence 457999999999875 67899999999999999986 4569999998765
No 57
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=98.68 E-value=1.6e-08 Score=101.12 Aligned_cols=69 Identities=38% Similarity=0.523 Sum_probs=56.6
Q ss_pred CCceEEEEEcCCCChHHHHHHHHHcCCcEEEEeccCCCcceeeccCCCCCceeeEEEEeccccccccccc
Q 017521 1 MSSAFVLTIRGGCSFEDKVRNAQKAGFEAAIVYDNEDDGVLVAMAGNSAGIKIHAVFVSKASGEKLKQYA 70 (370)
Q Consensus 1 l~~~ivLV~RG~CsF~~Kv~nAq~aGA~avIVyn~~~~~~~~~m~g~~~~i~IpvVfIs~~~Ge~L~k~l 70 (370)
++||||||+||+|.|.+|+++|+++||+|||||++.+. ....+.+......||++.|+..+++.|.+.+
T Consensus 113 v~GkIvlv~~g~~~~~~k~~~A~~~GA~gvIi~~~~~~-~~~g~~~~~~~~~IP~~~Is~~~a~~L~~~l 181 (421)
T 2ek8_A 113 LNGKIALIQRGNISFADKVRNAAKQGAKAVIIYNNTDG-KLNGTLGGSDASFVAAVGITKQEGDALAANL 181 (421)
T ss_dssp CTTSEEEEECCSSCHHHHHHHHHHTTCSEEEEECSSSS-CCCCBCSSCCTTCCEEEEECHHHHHHHHHHH
T ss_pred cCceEEEEeCCCCCHHHHHHHHHHCCCeEEEEEeCCCc-ccccccCCCCCCCccEEEeCHHHHHHHHHHh
Confidence 58999999999999999999999999999999998643 2333333334567999999999988877665
No 58
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.66 E-value=4.4e-09 Score=87.03 Aligned_cols=45 Identities=31% Similarity=0.543 Sum_probs=38.1
Q ss_pred CcccccccccccCCCeeEEe-CCCCcccHhHHHHHHhcCCCCCccccccccc
Q 017521 155 SRTCAICLEDYSVGEKLRIL-PCRHKFHAFCVDSWLTSWRTFCPVCKRDART 205 (370)
Q Consensus 155 ~~~C~ICLe~~~~~~~v~~l-pC~H~FH~~Ci~~Wl~~~~~~CP~CR~~i~~ 205 (370)
...|+||++.|... ..+ +|||.||..||..|+. ..||+||..+..
T Consensus 22 ~~~C~IC~~~~~~p---v~~~~CgH~fC~~Ci~~~~~---~~CP~Cr~~~~~ 67 (117)
T 1jm7_B 22 LLRCSRCTNILREP---VCLGGCEHIFCSNCVSDCIG---TGCPVCYTPAWI 67 (117)
T ss_dssp TTSCSSSCSCCSSC---BCCCSSSCCBCTTTGGGGTT---TBCSSSCCBCSC
T ss_pred CCCCCCCChHhhCc---cEeCCCCCHHHHHHHHHHhc---CCCcCCCCcCcc
Confidence 47899999999764 455 8999999999999987 359999998743
No 59
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=98.66 E-value=1.5e-08 Score=74.25 Aligned_cols=48 Identities=29% Similarity=0.654 Sum_probs=37.7
Q ss_pred CCcccccccccccCCCeeEEeCCC--C---cccHhHHHHHHhc-CCCCCcccccccc
Q 017521 154 TSRTCAICLEDYSVGEKLRILPCR--H---KFHAFCVDSWLTS-WRTFCPVCKRDAR 204 (370)
Q Consensus 154 ~~~~C~ICLe~~~~~~~v~~lpC~--H---~FH~~Ci~~Wl~~-~~~~CP~CR~~i~ 204 (370)
+...|.||+++. ++.+ ++||. | .||..||++|+.. .+.+||+||..+.
T Consensus 5 ~~~~CrIC~~~~--~~~l-~~PC~C~gs~~~~H~~Cl~~W~~~~~~~~C~~C~~~~~ 58 (60)
T 1vyx_A 5 DVPVCWICNEEL--GNER-FRACGCTGELENVHRSCLSTWLTISRNTACQICGVVYN 58 (60)
T ss_dssp SCCEETTTTEEC--SCCC-CCSCCCSSGGGSCCHHHHHHHHHHHTCSBCTTTCCBCC
T ss_pred CCCEeEEeecCC--CCce-ecCcCCCCchhhhHHHHHHHHHHhCCCCccCCCCCeee
Confidence 457899999983 3444 68964 4 8999999999985 4567999998764
No 60
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.63 E-value=8.7e-09 Score=96.51 Aligned_cols=49 Identities=16% Similarity=0.135 Sum_probs=42.2
Q ss_pred CCcccccccccccCCCeeEEeCCCCcccHhHHHHHHhcCCCCCccccccccc
Q 017521 154 TSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDART 205 (370)
Q Consensus 154 ~~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~~~~~CP~CR~~i~~ 205 (370)
+...|+||++-|.+. ++++|||.|+..||..|+.....+||+||.++..
T Consensus 207 ~~~~c~i~~~~~~dP---v~~~~gh~f~~~~i~~~~~~~~~~cP~~~~~~~~ 255 (281)
T 2c2l_A 207 DYLCGKISFELMREP---CITPSGITYDRKDIEEHLQRVGHFNPVTRSPLTQ 255 (281)
T ss_dssp STTBCTTTCSBCSSE---EECSSCCEEETTHHHHHHHHTCSSCTTTCCCCCG
T ss_pred cccCCcCcCCHhcCC---eECCCCCEECHHHHHHHHHHCCCCCcCCCCCCch
Confidence 467999999999865 6789999999999999998755559999998864
No 61
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=98.62 E-value=9e-09 Score=78.39 Aligned_cols=43 Identities=23% Similarity=0.641 Sum_probs=36.4
Q ss_pred CcccccccccccCCCeeEEeCCCCc-ccHhHHHHHHhcCCCCCccccccccc
Q 017521 155 SRTCAICLEDYSVGEKLRILPCRHK-FHAFCVDSWLTSWRTFCPVCKRDART 205 (370)
Q Consensus 155 ~~~C~ICLe~~~~~~~v~~lpC~H~-FH~~Ci~~Wl~~~~~~CP~CR~~i~~ 205 (370)
...|.||++.+.+ ...+||||. |+..|+..| ..||+||..+..
T Consensus 24 ~~~C~iC~~~~~~---~~~~pCgH~~~C~~C~~~~-----~~CP~Cr~~i~~ 67 (74)
T 4ic3_A 24 EKLCKICMDRNIA---IVFVPCGHLVTCKQCAEAV-----DKCPMCYTVITF 67 (74)
T ss_dssp HTBCTTTSSSBCC---EEEETTCCBCCCHHHHTTC-----SBCTTTCCBCSE
T ss_pred CCCCCCCCCCCCC---EEEcCCCChhHHHHhhhcC-----ccCCCcCcCccC
Confidence 3689999998764 467899999 999999998 349999998764
No 62
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=98.59 E-value=2e-08 Score=88.14 Aligned_cols=50 Identities=24% Similarity=0.456 Sum_probs=41.9
Q ss_pred CCcccccccccccCCCeeEEeCCCCcccHhHHHHHHhcCCCCCcccccccccC
Q 017521 154 TSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTS 206 (370)
Q Consensus 154 ~~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~~~~~CP~CR~~i~~~ 206 (370)
+...|+||++.|.+. ..++|||.|+..||..|+......||+||..+...
T Consensus 17 ~~~~C~IC~~~~~~p---v~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~ 66 (170)
T 3hcs_A 17 SKYECPICLMALREA---VQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLEN 66 (170)
T ss_dssp GGGBCTTTCSBCSSE---EECTTSCEEEHHHHHHHHHHHCSBCTTTCCBCCGG
T ss_pred CCCCCCCCChhhcCc---EECCCCCHHHHHHHHHHHHhCCCCCCCCccCcchh
Confidence 357999999998764 55899999999999999987554699999887653
No 63
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=98.58 E-value=6.5e-09 Score=100.50 Aligned_cols=54 Identities=30% Similarity=0.632 Sum_probs=41.3
Q ss_pred CCCcccccccccccCCCee-----EEeCCCCcccHhHHHHHHhcCC----------CCCcccccccccC
Q 017521 153 CTSRTCAICLEDYSVGEKL-----RILPCRHKFHAFCVDSWLTSWR----------TFCPVCKRDARTS 206 (370)
Q Consensus 153 ~~~~~C~ICLe~~~~~~~v-----~~lpC~H~FH~~Ci~~Wl~~~~----------~~CP~CR~~i~~~ 206 (370)
.+..+|+||++.+..+.++ .-.+|+|.||..||.+||.... ..||.||++|...
T Consensus 306 e~~~ECaICys~~l~~g~lPdk~C~n~~C~h~FH~~CL~kWLrs~~~sRqSFnvi~G~CPyCr~pIs~s 374 (381)
T 3k1l_B 306 NEELRCNICFAYRLDGGEVPLVSCDNAKCVLKCHAVCLEEWFKTLMDGKTFLEVSFGQCPFCKAKLSTS 374 (381)
T ss_dssp CSCCSCSSSCCSSCTTCCCCCBCCSCTTCCCCBCSGGGHHHHHHHHSSSCTTTCCEEECTTTCCEEEGG
T ss_pred cCCccCcccceeecCCCCCccccccCCccCCccchHHHHHHHHhCCCccccccccCCCCCCCCCcCCcc
Confidence 3567999999999873333 2346999999999999998621 2499999988653
No 64
>2yu4_A E3 SUMO-protein ligase NSE2; SP-ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.51 E-value=4.8e-08 Score=77.79 Aligned_cols=46 Identities=22% Similarity=0.495 Sum_probs=37.7
Q ss_pred CCcccccccccccCCCeeEEeC-CCCcccHhHHHHHHhcC-----CCCCcc--cccc
Q 017521 154 TSRTCAICLEDYSVGEKLRILP-CRHKFHAFCVDSWLTSW-----RTFCPV--CKRD 202 (370)
Q Consensus 154 ~~~~C~ICLe~~~~~~~v~~lp-C~H~FH~~Ci~~Wl~~~-----~~~CP~--CR~~ 202 (370)
....|+||++.|.+. .+++ |||.|+..||..|+..+ ...||+ |+..
T Consensus 6 ~~~~CPI~~~~~~dP---V~~~~cGh~f~r~cI~~~l~~~~~~~~~~~CP~tgc~~~ 59 (94)
T 2yu4_A 6 SGFTCPITKEEMKKP---VKNKVCGHTYEEDAIVRMIESRQKRKKKAYCPQIGCSHT 59 (94)
T ss_dssp SCCBCTTTCSBCSSE---EEESSSCCEEEHHHHHHHHHHHHTTTCCBCCCSTTCCCC
T ss_pred cEeECcCcCchhcCC---EEcCCCCCeecHHHHHHHHHHccCcCCCCCCCcCcCccc
Confidence 357899999999864 5575 99999999999999863 246999 9865
No 65
>2ea5_A Cell growth regulator with ring finger domain protein 1; CGRRF1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.48 E-value=9.1e-08 Score=71.75 Aligned_cols=46 Identities=30% Similarity=0.697 Sum_probs=37.2
Q ss_pred CCcccccccccccCCCeeEEeCCCCc-ccHhHHHHHHhcCCCCCcccccccccCC
Q 017521 154 TSRTCAICLEDYSVGEKLRILPCRHK-FHAFCVDSWLTSWRTFCPVCKRDARTST 207 (370)
Q Consensus 154 ~~~~C~ICLe~~~~~~~v~~lpC~H~-FH~~Ci~~Wl~~~~~~CP~CR~~i~~~~ 207 (370)
+...|.||++.+.+ +..+||+|. |+..|+.. ...||+||..|....
T Consensus 14 ~~~~C~IC~~~~~~---~v~~pCgH~~~C~~C~~~-----~~~CP~CR~~i~~~~ 60 (68)
T 2ea5_A 14 NSKDCVVCQNGTVN---WVLLPCRHTCLCDGCVKY-----FQQCPMCRQFVQESF 60 (68)
T ss_dssp CSSCCSSSSSSCCC---CEETTTTBCCSCTTHHHH-----CSSCTTTCCCCCCEE
T ss_pred CCCCCCCcCcCCCC---EEEECCCChhhhHHHHhc-----CCCCCCCCcchhceE
Confidence 45789999998654 578999999 99999984 235999999887643
No 66
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4, UIP4, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.47 E-value=5.4e-08 Score=77.25 Aligned_cols=48 Identities=27% Similarity=0.713 Sum_probs=39.5
Q ss_pred CcccccccccccCCCeeEEeCCCCcccHhHHHHHHhc----C---CCCCcc--cccc
Q 017521 155 SRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTS----W---RTFCPV--CKRD 202 (370)
Q Consensus 155 ~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~----~---~~~CP~--CR~~ 202 (370)
..+|.||++++...+.+..++|+|.|+..||..++.. . ...||. ||..
T Consensus 5 ~~~C~IC~~~~~~~~~~~l~~CgH~FC~~Cl~~~~~~~i~~g~~~~i~CP~~~C~~~ 61 (94)
T 1wim_A 5 SSGCKLCLGEYPVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACPKQ 61 (94)
T ss_dssp BCCCSSSCCCCBGGGEEEETTTTEEEEHHHHHHHHHHHHHHCSCCCEECSCTTCSSC
T ss_pred CcCCcccCcccccccceEcCCCCCcccHHHHHHHHHHHhhcCCcccccCccccCCCC
Confidence 4689999999987766666689999999999999874 1 236999 9987
No 67
>2f42_A STIP1 homology and U-box containing protein 1; chaperone; 2.50A {Danio rerio} PDB: 2c2v_S 2oxq_C
Probab=98.45 E-value=6.3e-08 Score=86.20 Aligned_cols=50 Identities=16% Similarity=0.126 Sum_probs=41.9
Q ss_pred CCcccccccccccCCCeeEEeCCCCcccHhHHHHHHhcCCCCCcccccccccC
Q 017521 154 TSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTS 206 (370)
Q Consensus 154 ~~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~~~~~CP~CR~~i~~~ 206 (370)
+...|+||++-|.+. .++||||.|+..||..|+..+..+||+||.++...
T Consensus 105 ~~f~CPI~~elm~DP---V~~~~Ghtfer~~I~~~l~~~~~tcP~t~~~l~~~ 154 (179)
T 2f42_A 105 DYLCGKISFELMREP---CITPSGITYDRKDIEEHLQRVGHFDPVTRSPLTQD 154 (179)
T ss_dssp GGGBCTTTCSBCSSE---EECTTSCEEEHHHHHHHHHHTCSBCTTTCCBCCGG
T ss_pred HhhcccCccccCCCC---eECCCCCEECHHHHHHHHHhCCCCCCCCcCCCChh
Confidence 458999999999865 56799999999999999987434699999887653
No 68
>2ecg_A Baculoviral IAP repeat-containing protein 4; BIRC4, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.41 E-value=1.2e-07 Score=72.19 Aligned_cols=44 Identities=23% Similarity=0.628 Sum_probs=35.5
Q ss_pred CcccccccccccCCCeeEEeCCCCc-ccHhHHHHHHhcCCCCCcccccccccC
Q 017521 155 SRTCAICLEDYSVGEKLRILPCRHK-FHAFCVDSWLTSWRTFCPVCKRDARTS 206 (370)
Q Consensus 155 ~~~C~ICLe~~~~~~~v~~lpC~H~-FH~~Ci~~Wl~~~~~~CP~CR~~i~~~ 206 (370)
...|+||++.+.+ ...+||||. |+..|+..+ ..||+||..+...
T Consensus 25 ~~~C~IC~~~~~~---~~~~pCgH~~~C~~C~~~~-----~~CP~Cr~~i~~~ 69 (75)
T 2ecg_A 25 EKLCKICMDRNIA---IVFVPCGHLVTCKQCAEAV-----DKCPMCYTVITFK 69 (75)
T ss_dssp HHSCSSSCSSCCC---BCCSSSCCCCBCHHHHHHC-----SBCTTTCCBCCCC
T ss_pred CCCCCcCCCCCCC---EEEecCCCHHHHHHHhhCC-----CCCccCCceecCc
Confidence 3689999999764 356899999 999999652 3599999988653
No 69
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=98.32 E-value=3.3e-07 Score=97.37 Aligned_cols=35 Identities=29% Similarity=0.348 Sum_probs=33.6
Q ss_pred CCceEEEEEcCCCChHHHHHHHHHcCCcEEEEecc
Q 017521 1 MSSAFVLTIRGGCSFEDKVRNAQKAGFEAAIVYDN 35 (370)
Q Consensus 1 l~~~ivLV~RG~CsF~~Kv~nAq~aGA~avIVyn~ 35 (370)
++||||||+||+|.|.+|+++|+++||+|||||++
T Consensus 153 v~GkIvlv~~G~~~~~~Kv~~A~~~GA~gviiy~d 187 (707)
T 3fed_A 153 CTGKIVIARYGKIFRGNKVKNAMLAGAIGIILYSD 187 (707)
T ss_dssp CTTCEEEEECCSSCHHHHHHHHHHTTCSEEEEECC
T ss_pred CCCeEEEEECCCCCHhHHHHHHHHCCCEEEEEEcC
Confidence 57999999999999999999999999999999986
No 70
>2yho_A E3 ubiquitin-protein ligase mylip; ligase, E2 ligase-E3 ligase complex, ring zinc-finger, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 2yhn_A
Probab=98.29 E-value=1.4e-07 Score=72.72 Aligned_cols=45 Identities=24% Similarity=0.615 Sum_probs=37.1
Q ss_pred CcccccccccccCCCeeEEeCCCCc-ccHhHHHHHHhcCCCCCcccccccccCC
Q 017521 155 SRTCAICLEDYSVGEKLRILPCRHK-FHAFCVDSWLTSWRTFCPVCKRDARTST 207 (370)
Q Consensus 155 ~~~C~ICLe~~~~~~~v~~lpC~H~-FH~~Ci~~Wl~~~~~~CP~CR~~i~~~~ 207 (370)
...|.||++.+.. +..+||||. |+..|+..| + .||+||..+....
T Consensus 18 ~~~C~IC~~~~~~---~v~~pCgH~~~C~~C~~~~----~-~CP~Cr~~i~~~~ 63 (79)
T 2yho_A 18 AMLCMVCCEEEIN---STFCPCGHTVCCESCAAQL----Q-SCPVCRSRVEHVQ 63 (79)
T ss_dssp HTBCTTTSSSBCC---EEEETTCBCCBCHHHHTTC----S-BCTTTCCBCCEEE
T ss_pred CCEeEEeCcccCc---EEEECCCCHHHHHHHHHhc----C-cCCCCCchhhCeE
Confidence 3689999998654 578899999 999999986 2 5999999887653
No 71
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=98.29 E-value=4.8e-07 Score=95.17 Aligned_cols=70 Identities=21% Similarity=0.289 Sum_probs=53.0
Q ss_pred CCceEEEEEcCCCChHHHHHHHHHcCCcEEEEeccCCCcce-------ee----ccCCC-------------------CC
Q 017521 1 MSSAFVLTIRGGCSFEDKVRNAQKAGFEAAIVYDNEDDGVL-------VA----MAGNS-------------------AG 50 (370)
Q Consensus 1 l~~~ivLV~RG~CsF~~Kv~nAq~aGA~avIVyn~~~~~~~-------~~----m~g~~-------------------~~ 50 (370)
++||||||+||+|.|.+|+++|+++||+|||||++..+... .+ ..|++ ..
T Consensus 130 v~GkIvlv~~g~~~~~~K~~~A~~~GA~gvii~~~~~~~~~~~~~~~~~G~~~~~~Gdp~tpg~ps~~~~~~~~~~~~~~ 209 (640)
T 3kas_A 130 VNGSIVIVRAGKITFAEKVANAESLNAIGVLIYMDQTKFPIVNAELSFFGHAHLGTGDPYTPGFPSFNHTQFPPSRSSGL 209 (640)
T ss_dssp CTTSEEEEESCSSCHHHHHHHHHTTTCSEEEEECCTTTCCCSCTTCCCCEECCSSSSCSCCCSSCC---CCCCCCSSCCC
T ss_pred cCCcEEEEecCCCCHHHHHHHHHHCCCeEEEEEeccccccccccccccccccccCCCCCCCCCcccccccccccccccCC
Confidence 58999999999999999999999999999999997532111 00 00110 12
Q ss_pred ceeeEEEEeccccccccccc
Q 017521 51 IKIHAVFVSKASGEKLKQYA 70 (370)
Q Consensus 51 i~IpvVfIs~~~Ge~L~k~l 70 (370)
..||++-|+..+++.|.+.+
T Consensus 210 p~IP~~~Is~~~a~~Ll~~l 229 (640)
T 3kas_A 210 PNIPVQTISRAAAEKLFGNM 229 (640)
T ss_dssp CSSCEEECCHHHHHHHHTTE
T ss_pred CCCCEEecCHHHHHHHHHHc
Confidence 46999999999998887654
No 72
>2bay_A PRE-mRNA splicing factor PRP19; U-BOX, ubiquitin ligase, E3 ligase; 1.50A {Saccharomyces cerevisiae} SCOP: g.44.1.2 PDB: 1n87_A
Probab=98.19 E-value=5.3e-07 Score=66.16 Aligned_cols=50 Identities=12% Similarity=0.067 Sum_probs=41.1
Q ss_pred CcccccccccccCCCeeEEe-CCCCcccHhHHHHHHhcCCCCCcccccccccCCC
Q 017521 155 SRTCAICLEDYSVGEKLRIL-PCRHKFHAFCVDSWLTSWRTFCPVCKRDARTSTG 208 (370)
Q Consensus 155 ~~~C~ICLe~~~~~~~v~~l-pC~H~FH~~Ci~~Wl~~~~~~CP~CR~~i~~~~~ 208 (370)
...|+||++.|.+. .++ +|||+|.+.||++||..+. +||+++.++.....
T Consensus 3 ~~~CpIs~~~m~dP---V~~~~sG~~yer~~I~~~l~~~~-~cP~t~~~L~~~~L 53 (61)
T 2bay_A 3 HMLCAISGKVPRRP---VLSPKSRTIFEKSLLEQYVKDTG-NDPITNEPLSIEEI 53 (61)
T ss_dssp -CCCTTTCSCCSSE---EEETTTTEEEEHHHHHHHHHHHS-BCTTTCCBCCGGGC
T ss_pred eEEecCCCCCCCCC---EEeCCCCcEEcHHHHHHHHHhCC-CCcCCcCCCChhhc
Confidence 36799999999854 455 8999999999999999855 49999998876543
No 73
>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=98.13 E-value=8.5e-07 Score=83.02 Aligned_cols=49 Identities=24% Similarity=0.514 Sum_probs=40.5
Q ss_pred CcccccccccccCCCeeEEeCCCCcccHhHHHHHHhcC-CCCCcc--ccccccc
Q 017521 155 SRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSW-RTFCPV--CKRDART 205 (370)
Q Consensus 155 ~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~~-~~~CP~--CR~~i~~ 205 (370)
...|+||++.|.+ .|+.+.|||.|++.||..|+..+ ...||+ ||+.+..
T Consensus 181 el~CPIcl~~f~D--PVts~~CGHsFcR~cI~~~~~~~~~~~CPvtGCr~~l~~ 232 (267)
T 3htk_C 181 ELTCPITCKPYEA--PLISRKCNHVFDRDGIQNYLQGYTTRDCPQAACSQVVSM 232 (267)
T ss_dssp CSBCTTTSSBCSS--EEEESSSCCEEEHHHHHHHSTTCSCEECSGGGCSCEECG
T ss_pred eeECcCccCcccC--CeeeCCCCCcccHHHHHHHHHhCCCCCCCcccccCcCch
Confidence 4689999999875 46667899999999999999863 346999 9987654
No 74
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=98.10 E-value=2.6e-06 Score=85.92 Aligned_cols=71 Identities=11% Similarity=0.062 Sum_probs=52.7
Q ss_pred CCceEEEEEcCCCC---------hHHH----HHHHHHcCCcEEEEeccCCCc---ceeeccC-CCCCceeeEEEEecccc
Q 017521 1 MSSAFVLTIRGGCS---------FEDK----VRNAQKAGFEAAIVYDNEDDG---VLVAMAG-NSAGIKIHAVFVSKASG 63 (370)
Q Consensus 1 l~~~ivLV~RG~Cs---------F~~K----v~nAq~aGA~avIVyn~~~~~---~~~~m~g-~~~~i~IpvVfIs~~~G 63 (370)
++||||||.||.|. |.+| +.+|+++||+||||+|+..+. ....+.+ ......||++.|+..+|
T Consensus 127 vkGKIVlv~~~~~~~~~~~~y~~~~~kr~~~a~~A~~aGA~avIi~~~~~~~~~~~~tg~~~~~~~~~~IP~~~Is~~da 206 (444)
T 3iib_A 127 LNDKIAFIDAKTERHRDGKGYGQTASGRSRGAVAAAEKGAVGIIIRSIGTDHDRMAHTGMMRYEEGVTAIPAAAISNPDA 206 (444)
T ss_dssp TTTCEEEECCCCCCCTTCHHHHHHHHHHHHHHHHHHHTTCSEEEEECSCSCCSSCCCCCBCCCCTTSCCCCEEEECHHHH
T ss_pred cCccEEEEeCCCCCCcccccccchhhhhhhHHHHHHHCCCeEEEEEccCCcccccccCCccccCCCCCCCCeEEecHHHH
Confidence 58999999999996 6666 467999999999999875432 1112222 22346799999999999
Q ss_pred cccccccc
Q 017521 64 EKLKQYAG 71 (370)
Q Consensus 64 e~L~k~l~ 71 (370)
+.|++.+.
T Consensus 207 ~~L~~~l~ 214 (444)
T 3iib_A 207 DLINAMLK 214 (444)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 98876553
No 75
>3t6p_A Baculoviral IAP repeat-containing protein 2; ring, BIR, CARD, UBA, apoptosis, ubiquitin ligase, SMAC/ ubiquitin, caspase, IAP family, SMAC mimetic; 1.90A {Homo sapiens} PDB: 1qbh_A 2l9m_A 3eb5_A 3eb6_A 4auq_B
Probab=98.10 E-value=5.8e-07 Score=87.85 Aligned_cols=44 Identities=27% Similarity=0.727 Sum_probs=37.1
Q ss_pred CCcccccccccccCCCeeEEeCCCCc-ccHhHHHHHHhcCCCCCccccccccc
Q 017521 154 TSRTCAICLEDYSVGEKLRILPCRHK-FHAFCVDSWLTSWRTFCPVCKRDART 205 (370)
Q Consensus 154 ~~~~C~ICLe~~~~~~~v~~lpC~H~-FH~~Ci~~Wl~~~~~~CP~CR~~i~~ 205 (370)
+...|+||++.+.. ...+||||. ||..|+..| ..||+||..+..
T Consensus 294 ~~~~C~IC~~~~~~---~v~lpCgH~~fC~~C~~~~-----~~CP~CR~~i~~ 338 (345)
T 3t6p_A 294 EERTCKVCMDKEVS---VVFIPCGHLVVCQECAPSL-----RKCPICRGIIKG 338 (345)
T ss_dssp TTCBCTTTSSSBCC---EEEETTCCEEECTTTGGGC-----SBCTTTCCBCCE
T ss_pred CCCCCCccCCcCCc---eEEcCCCChhHhHHHHhcC-----CcCCCCCCCccC
Confidence 45789999999864 467899999 999999988 349999998764
No 76
>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}
Probab=98.01 E-value=3.4e-06 Score=67.37 Aligned_cols=49 Identities=22% Similarity=0.424 Sum_probs=40.1
Q ss_pred ccccccccccCCCeeEEeCCCCcccHhHHHHHHhcCCCCCcccccccccCC
Q 017521 157 TCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTST 207 (370)
Q Consensus 157 ~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~~~~~CP~CR~~i~~~~ 207 (370)
.|.+|--.+. ...|.+||+|+|+.+|+..|.++....||+|+.+|...+
T Consensus 3 fC~~C~~Pi~--iygRmIPCkHvFCydCa~~~~~~~~k~Cp~C~~~V~rVe 51 (101)
T 3vk6_A 3 FCDKCGLPIK--VYGRMIPCKHVFCYDCAILHEKKGDKMCPGCSDPVQRIE 51 (101)
T ss_dssp BCTTTCSBCS--EEEEEETTCCEEEHHHHHHHHHTTCCBCTTTCCBCSEEE
T ss_pred ecCccCCCeE--EEeeeccccccHHHHHHHHHHhccCCCCcCcCCeeeeeE
Confidence 5888866654 457999999999999999998876667999999876543
No 77
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=97.87 E-value=1.5e-05 Score=80.06 Aligned_cols=72 Identities=26% Similarity=0.327 Sum_probs=56.3
Q ss_pred CCceEEEEEcCCC-----ChHHHHHHHHHcCCcEEEEeccCCCccee--eccCCCCCceeeEEEEeccccccccccccc
Q 017521 1 MSSAFVLTIRGGC-----SFEDKVRNAQKAGFEAAIVYDNEDDGVLV--AMAGNSAGIKIHAVFVSKASGEKLKQYAGS 72 (370)
Q Consensus 1 l~~~ivLV~RG~C-----sF~~Kv~nAq~aGA~avIVyn~~~~~~~~--~m~g~~~~i~IpvVfIs~~~Ge~L~k~l~~ 72 (370)
++|||||++||+| .|.+|+.+++++||++|||||+++...+. ..........||+++|...+|+.|+.+++.
T Consensus 272 ~~gkivl~~rg~~~~~~~~~~~~~~~~~~aGa~gvii~~~~~~~g~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~ 350 (441)
T 1y9z_A 272 MANKICLVERVGNQGSSYPEINSTKACKTAGAKGIIVYSNSALPGLQNPFLVDANSDITVPSVSVDRATGLALKAKLGQ 350 (441)
T ss_dssp CTTEEEEEECCSCSSSSCTHHHHHHHHHHTTCSEEEEECCTTSCSCCCCEEECTTCCCCSCEEEECHHHHHHHHTTTTS
T ss_pred ccccEEEEeccccCcccccHHHHHHHHHhcCCeEEEEEeCCCccccccccccccccCccccEEEEeHHHHHHHHHHhcC
Confidence 5799999999987 88999999999999999999886532111 111122345799999999999999988765
No 78
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=97.74 E-value=2.7e-05 Score=85.21 Aligned_cols=64 Identities=33% Similarity=0.563 Sum_probs=52.0
Q ss_pred CCceEEEEEcCCCChHHHHHHHHHcCCcEEEEeccCCCcceeeccCCCCCceeeEEEEecccccccc
Q 017521 1 MSSAFVLTIRGGCSFEDKVRNAQKAGFEAAIVYDNEDDGVLVAMAGNSAGIKIHAVFVSKASGEKLK 67 (370)
Q Consensus 1 l~~~ivLV~RG~CsF~~Kv~nAq~aGA~avIVyn~~~~~~~~~m~g~~~~i~IpvVfIs~~~Ge~L~ 67 (370)
++|||||++||.|+|.+|+.+++++||.++|+||+........+. ....||+++|.+.+|+.|+
T Consensus 279 v~Gkivl~~rg~~~~~~k~~~~~~~Ga~gvi~~n~~~~~~~~~~~---~~~~iP~~~i~~~~g~~l~ 342 (926)
T 1xf1_A 279 VKGKIALIERGDIDFKDKIAKAKKAGAVGVLIYDNQDKGFPIELP---NVDQMPAAFISRKDGLLLK 342 (926)
T ss_dssp CTTSEEEEECCSSCHHHHHHHHHHTTCSEEEEECSSTTCCCEECC---CSTTCCEEEECHHHHHHHH
T ss_pred cCCeEEEEECCCCCHHHHHHHHHhCCCcEEEEEecCCCCcccccC---ccccccEEEEeHHHHHHHH
Confidence 579999999999999999999999999999999987654333322 2346899999988887654
No 79
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=97.70 E-value=2.1e-05 Score=73.00 Aligned_cols=52 Identities=23% Similarity=0.468 Sum_probs=41.0
Q ss_pred CcccccccccccCCCeeEEeCCCCcccHhHHHHHHhcC-CCCCcccccccccCCC
Q 017521 155 SRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSW-RTFCPVCKRDARTSTG 208 (370)
Q Consensus 155 ~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~~-~~~CP~CR~~i~~~~~ 208 (370)
...|.||.+-...+..+ -.|+|.||..|++.|++.+ +..||.|+.......+
T Consensus 180 i~~C~iC~~iv~~g~~C--~~C~~~~H~~C~~~~~~~~~~~~CP~C~~~W~~~~~ 232 (238)
T 3nw0_A 180 VKICNICHSLLIQGQSC--ETCGIRMHLPCVAKYFQSNAEPRCPHCNDYWPHEIP 232 (238)
T ss_dssp CCBCTTTCSBCSSCEEC--SSSCCEECHHHHHHHTTTCSSCBCTTTCCBCCSCCC
T ss_pred CCcCcchhhHHhCCccc--CccChHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC
Confidence 57899999998877433 3499999999999999874 3469999987655443
No 80
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A*
Probab=97.55 E-value=3.1e-05 Score=81.61 Aligned_cols=65 Identities=14% Similarity=0.116 Sum_probs=54.1
Q ss_pred CCceEEEEEcCCCChHHHHHHHHHcCCcEEEEeccCCCcceeeccCCCCCceeeEEEEeccccccccccccc
Q 017521 1 MSSAFVLTIRGGCSFEDKVRNAQKAGFEAAIVYDNEDDGVLVAMAGNSAGIKIHAVFVSKASGEKLKQYAGS 72 (370)
Q Consensus 1 l~~~ivLV~RG~CsF~~Kv~nAq~aGA~avIVyn~~~~~~~~~m~g~~~~i~IpvVfIs~~~Ge~L~k~l~~ 72 (370)
++|||||+.||.|.|.+|..+++++||.++|++|++.. + .. ....+|+++|...+|+.|+.++..
T Consensus 282 l~GkIvlc~~g~~~~~~k~~~~~~~Ga~g~i~~n~~~~--~---~~--~~~~~P~~~v~~~~g~~i~~yi~s 346 (649)
T 3i6s_A 282 PENTIVICDDNGDFSDQMRIITRARLKAAIFISEDPGV--F---RS--ATFPNPGVVVNKKEGKQVINYVKN 346 (649)
T ss_dssp GGGCEEEECCCSCHHHHHHHHHHHTCSEEEEECCCGGG--G---GC--CCCCSCEEEECHHHHHHHHHHHHT
T ss_pred cCCcEEEEeCCCccHHHHHHHHHhcCceEEEEecCccc--c---cc--ccCcCCEEEEcHHHHHHHHHHHhc
Confidence 38999999999999999999999999999999997722 1 11 234689999999999999887643
No 81
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=93.58 E-value=0.04 Score=40.59 Aligned_cols=45 Identities=29% Similarity=0.486 Sum_probs=33.3
Q ss_pred CcccccccccccCCCeeEEeCCCCcccHhHHHHHHhcC---CCCCcccccc
Q 017521 155 SRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSW---RTFCPVCKRD 202 (370)
Q Consensus 155 ~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~~---~~~CP~CR~~ 202 (370)
...|.||.+. ++.|..-.|...||..|++..|... .=.||.|+..
T Consensus 12 ~~~C~vC~~~---~~ll~Cd~C~~~~H~~Cl~P~l~~~P~g~W~C~~C~~~ 59 (66)
T 2lri_C 12 GARCGVCGDG---TDVLRCTHCAAAFHWRCHFPAGTSRPGTGLRCRSCSGD 59 (66)
T ss_dssp TCCCTTTSCC---TTCEECSSSCCEECHHHHCTTTCCCCSSSCCCTTTTTC
T ss_pred CCCcCCCCCC---CeEEECCCCCCceecccCCCccCcCCCCCEECccccCC
Confidence 4679999753 5555555589999999999888752 2359999754
No 82
>2jun_A Midline-1; B-BOX, TRIM, ring finger, alternative splicing, coiled coil, cytoplasm, cytoskeleton, disease mutation, ligase, metal-binding; NMR {Homo sapiens}
Probab=93.11 E-value=0.04 Score=43.36 Aligned_cols=34 Identities=15% Similarity=0.368 Sum_probs=27.0
Q ss_pred CcccccccccccCCCeeEEeCCCCcccHhHHHHH
Q 017521 155 SRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSW 188 (370)
Q Consensus 155 ~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~W 188 (370)
...|.||++++........+.|+|.|+..|+..|
T Consensus 3 e~~C~~C~~~~~~~av~~C~~C~~~~C~~Cl~~~ 36 (101)
T 2jun_A 3 KVLCQFCDQDPAQDAVKTCVTCEVSYCDECLKAT 36 (101)
T ss_dssp CCBCTTCCSSSCCBCCEEETTTTEEECHHHHHHH
T ss_pred CCCCcCCCCCCCCCceEECCcCChHHhHHHCHHH
Confidence 4689999987644444556899999999999983
No 83
>2ko5_A Ring finger protein Z; lassa fever virus-Z, negative regulator of EIF4E, cytoplasm, HOST-virus interaction, lipoprotein, membrane; NMR {Lassa virus josiah}
Probab=91.74 E-value=0.2 Score=39.28 Aligned_cols=49 Identities=22% Similarity=0.481 Sum_probs=37.2
Q ss_pred CCcccccccccccCCCeeEEeCC-CCcccHhHHHHHHhcCCCCCcccccccccCCC
Q 017521 154 TSRTCAICLEDYSVGEKLRILPC-RHKFHAFCVDSWLTSWRTFCPVCKRDARTSTG 208 (370)
Q Consensus 154 ~~~~C~ICLe~~~~~~~v~~lpC-~H~FH~~Ci~~Wl~~~~~~CP~CR~~i~~~~~ 208 (370)
+...|-.|+-+.+. .+.| .|.++..|+..-|.... .||+|+.+++....
T Consensus 27 G~~nCKsCWf~~k~-----LV~C~dHYLCl~CLtlmL~~Sd-rCpIC~~pLPtkl~ 76 (99)
T 2ko5_A 27 GPQFCKSCWFENKG-----LVECNNHYLCLNCLTLLLSVSN-RCPICKMPLPTKLR 76 (99)
T ss_dssp CCCCCCSSCSCCSS-----EEECSSCEEEHHHHHHTCSSSS-EETTTTEECCCCSC
T ss_pred CcccChhhccccCC-----eeeecchhhHHHHHHHHHhhcc-CCcccCCcCCccee
Confidence 45789999977542 3347 69999999999777644 59999998877543
No 84
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=89.68 E-value=0.1 Score=39.05 Aligned_cols=51 Identities=20% Similarity=0.395 Sum_probs=34.6
Q ss_pred CCcccccccccccCCCeeEEeCCCCcccHhHHHHHHhc---CCCCCcccccccc
Q 017521 154 TSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTS---WRTFCPVCKRDAR 204 (370)
Q Consensus 154 ~~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~---~~~~CP~CR~~i~ 204 (370)
+...|.||.........|..=.|.-.||..|+..-+.. ..-.||.|+..+.
T Consensus 17 ~~~~C~~C~~~~~~~~mi~CD~C~~wfH~~Cv~~~~~~~~~~~w~C~~C~~~~~ 70 (75)
T 2k16_A 17 QIWICPGCNKPDDGSPMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCANKIK 70 (75)
T ss_dssp EEECBTTTTBCCSSCCEEECSSSSSEEEHHHHTCSSCCCSSSCCCCTTTHHHHC
T ss_pred CCcCCCCCCCCCCCCCEEEcCCCCcccccccCCCCccCCCCCCEEChhccCchh
Confidence 34679999877543334444458999999999865432 2345999987654
No 85
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=86.28 E-value=0.17 Score=36.52 Aligned_cols=48 Identities=27% Similarity=0.464 Sum_probs=33.6
Q ss_pred CCcccccccccccCC-CeeEEeCCCCcccHhHHHHHHh----cCCCCCccccc
Q 017521 154 TSRTCAICLEDYSVG-EKLRILPCRHKFHAFCVDSWLT----SWRTFCPVCKR 201 (370)
Q Consensus 154 ~~~~C~ICLe~~~~~-~~v~~lpC~H~FH~~Ci~~Wl~----~~~~~CP~CR~ 201 (370)
+...|.||...+.++ ..|..-.|...||..|+..-.. ...-.||.|+.
T Consensus 5 e~~~C~~C~~~~~~~~~mI~Cd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~ 57 (64)
T 1we9_A 5 SSGQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSN 57 (64)
T ss_dssp SCCCCSSSCCCCCSSSCEEECSSSCCEEETTTTTCCTTGGGGCSSCCCHHHHT
T ss_pred CCCCCCCCCCccCCCCCEEEccCCCCCCCccccCcChhHhcCCCcEECCCCcC
Confidence 356899999988644 4455555899999999864322 13456999975
No 86
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=85.74 E-value=0.37 Score=34.64 Aligned_cols=46 Identities=24% Similarity=0.671 Sum_probs=32.4
Q ss_pred CCcccccccccccCCCeeEEeCCCCcccHhHHHHHHhc---CCCCCcccccc
Q 017521 154 TSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTS---WRTFCPVCKRD 202 (370)
Q Consensus 154 ~~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~---~~~~CP~CR~~ 202 (370)
....|.||.+. ++.+..-.|.-.||..|++.-+.. ..-.||.|+..
T Consensus 10 ~~~~C~vC~~~---g~ll~CD~C~~~fH~~Cl~p~l~~~p~g~W~C~~C~~~ 58 (61)
T 2l5u_A 10 HQDYCEVCQQG---GEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKE 58 (61)
T ss_dssp CCSSCTTTSCC---SSEEECSSSSCEEEHHHHCTTCCSCCCSSCCCTTGGGG
T ss_pred CCCCCccCCCC---CcEEECCCCChhhhhhccCCCCCCCCCCceECcccccc
Confidence 45789999873 455554458899999999975543 23359999753
No 87
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=84.28 E-value=0.52 Score=36.26 Aligned_cols=34 Identities=21% Similarity=0.548 Sum_probs=23.7
Q ss_pred CCcccccccccccCCCeeEEeCCCCcccHhHHHHH
Q 017521 154 TSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSW 188 (370)
Q Consensus 154 ~~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~W 188 (370)
.+..|.|| +.|..++....=-|+-+||..|+.+-
T Consensus 14 ~D~~C~VC-~~~t~~~l~pCRvC~RvfH~~CL~r~ 47 (89)
T 1wil_A 14 NDEMCDVC-EVWTAESLFPCRVCTRVFHDGCLRRM 47 (89)
T ss_dssp CSCCCTTT-CCCCSSCCSSCSSSSSCCCHHHHHHH
T ss_pred CCcccCcc-ccccccceeccccccccccHhhcccc
Confidence 45789999 44555543322238999999999984
No 88
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=83.84 E-value=0.4 Score=35.87 Aligned_cols=47 Identities=23% Similarity=0.356 Sum_probs=32.2
Q ss_pred CcccccccccccCCCeeEEeCCCCcccHhHHHHHH--------hcCCCCCcccccc
Q 017521 155 SRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWL--------TSWRTFCPVCKRD 202 (370)
Q Consensus 155 ~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl--------~~~~~~CP~CR~~ 202 (370)
...| ||...+..+..|..-.|...||..|+..-. ....-.||.|+..
T Consensus 16 ~~~C-~C~~~~~~~~MI~Cd~C~~WfH~~Cvgl~~~~~~~l~~~~~~~~C~~C~~~ 70 (76)
T 1wem_A 16 ALYC-ICRQPHNNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTIL 70 (76)
T ss_dssp CCCS-TTCCCCCSSCEEECSSSCCEEEHHHHSCCHHHHHHHHHHTCCCCCHHHHHH
T ss_pred CCEE-ECCCccCCCCEEEeCCCCCcEeCeEEccchhhhhhccCCCCeEECcCCcCc
Confidence 3567 898887655566655699999999985211 1134569999754
No 89
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo}
Probab=83.50 E-value=0.55 Score=48.90 Aligned_cols=57 Identities=9% Similarity=0.039 Sum_probs=42.2
Q ss_pred CCceEEEEEcCCCChHHHHHHHHHcCCcEEEEeccCCCcceeeccCCCCCceeeEEEEeccccccccc
Q 017521 1 MSSAFVLTIRGGCSFEDKVRNAQKAGFEAAIVYDNEDDGVLVAMAGNSAGIKIHAVFVSKASGEKLKQ 68 (370)
Q Consensus 1 l~~~ivLV~RG~CsF~~Kv~nAq~aGA~avIVyn~~~~~~~~~m~g~~~~i~IpvVfIs~~~Ge~L~k 68 (370)
++|||+|++|+ |..|..+++.+||.++|++++..+.. ....+|.++|...++..++.
T Consensus 280 v~gkivl~~~~---~~~~~~~~~~~Ga~gvi~~~~~~~~~--------~~~~lP~~~v~~~~g~~i~~ 336 (621)
T 3vta_A 280 LKGKIVVCEAS---FGPHEFFKSLDGAAGVLMTSNTRDYA--------DSYPLPSSVLDPNDLLATLR 336 (621)
T ss_dssp TTTSEEECSSC---CCHHHHHHHHTTCSEEEEECSCCSSC--------CCCSSSEEEECHHHHHHHHH
T ss_pred ccceEEEEecC---CChhHHhhhhcceeEEEEEecCCCcc--------cccccceEEECHHHHHHHHH
Confidence 46899998754 66899999999999999998765421 12347888888777766654
No 90
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=82.69 E-value=0.24 Score=35.64 Aligned_cols=47 Identities=26% Similarity=0.588 Sum_probs=31.8
Q ss_pred CCCcccccccccccCCCeeEEeCCCCcccHhHHHHHHhc---CCCCCcccccc
Q 017521 153 CTSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTS---WRTFCPVCKRD 202 (370)
Q Consensus 153 ~~~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~---~~~~CP~CR~~ 202 (370)
.....|.||.+. ++.+..-.|...||..|+..-|.. ..-.||.|+..
T Consensus 7 ~~~~~C~vC~~~---g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~ 56 (61)
T 1mm2_A 7 HHMEFCRVCKDG---GELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCP 56 (61)
T ss_dssp SSCSSCTTTCCC---SSCBCCSSSCCCBCSSSSSSCCSSCCSSCCCCTTTTTT
T ss_pred CCCCcCCCCCCC---CCEEEcCCCCHHHcccccCCCcCcCCCCccCChhhcCc
Confidence 346789999853 444444448899999999864443 22359999764
No 91
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=82.58 E-value=0.47 Score=32.53 Aligned_cols=45 Identities=24% Similarity=0.571 Sum_probs=30.1
Q ss_pred ccccccccccCCCeeEEeCCCCcccHhHHHHHHhc---CCCCCccccc
Q 017521 157 TCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTS---WRTFCPVCKR 201 (370)
Q Consensus 157 ~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~---~~~~CP~CR~ 201 (370)
.|.||.+.-..++.+..-.|...||..|+++=|.. ..-.||.|+.
T Consensus 2 ~C~vC~~~~~~~~ll~Cd~C~~~~H~~Cl~p~l~~~P~g~W~C~~C~~ 49 (51)
T 1f62_A 2 RCKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPACQP 49 (51)
T ss_dssp CCTTTCCSSCCSCCEECTTTCCEECHHHHCTTCCSCCSSCCSCTTTSC
T ss_pred CCCCCCCCCCCCCEEECCCCChhhCcccCCCCcCCCCCCcEECcCccc
Confidence 48899876444444554458999999999753332 1234999964
No 92
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=81.73 E-value=0.25 Score=44.21 Aligned_cols=48 Identities=27% Similarity=0.481 Sum_probs=32.6
Q ss_pred CCCcccccccccccCCCeeEEeCCCCcccHhHHHHHHhc---CCCCCccccccc
Q 017521 153 CTSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTS---WRTFCPVCKRDA 203 (370)
Q Consensus 153 ~~~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~---~~~~CP~CR~~i 203 (370)
..+..|.||.+. ++.+..=.|...||..|+++.|.. ..-.||.|+..-
T Consensus 5 ~~~~~C~~C~~~---g~ll~Cd~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~ 55 (207)
T 3u5n_A 5 PNEDWCAVCQNG---GDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDIG 55 (207)
T ss_dssp SSCSSBTTTCCC---EEEEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSS
T ss_pred CCCCCCCCCCCC---CceEEcCCCCCccCCccCCCCCCCCCCCCEEeCceeCcc
Confidence 345789999754 443333348899999999876654 223599997643
No 93
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=81.49 E-value=0.35 Score=42.73 Aligned_cols=48 Identities=19% Similarity=0.421 Sum_probs=33.7
Q ss_pred CcccccccccccCCC----eeEEeCCCCcccHhHHHHH------Hhc----CCCCCcccccc
Q 017521 155 SRTCAICLEDYSVGE----KLRILPCRHKFHAFCVDSW------LTS----WRTFCPVCKRD 202 (370)
Q Consensus 155 ~~~C~ICLe~~~~~~----~v~~lpC~H~FH~~Ci~~W------l~~----~~~~CP~CR~~ 202 (370)
+..|+||...|.+++ .|..--|...||..|+..- +.. ..-.||.|+..
T Consensus 2 G~~CpiC~k~Y~~~~~~~~MIqCd~C~~W~H~~Cvgi~~~~~e~~~~~pe~~~y~Cp~C~~~ 63 (183)
T 3lqh_A 2 GNFCPLCDKCYDDDDYESKMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTER 63 (183)
T ss_dssp CCBCTTTCCBCTTCCTTCCEEECTTTCCEEEGGGSSCCHHHHHHHHHSHHHHCCCCTTTCCS
T ss_pred cCcCCCCcCccCCcccCCCeEECCCCCcccchhccccCHHHHHHhhcCCCCCeeECcCCCCC
Confidence 356999999998876 4555559999999997421 110 13459999764
No 94
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=81.00 E-value=0.39 Score=38.54 Aligned_cols=47 Identities=26% Similarity=0.599 Sum_probs=31.8
Q ss_pred CCcccccccccccCCCeeEEeCCCCcccHhHHHHHHhc---CCCCCcccc
Q 017521 154 TSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTS---WRTFCPVCK 200 (370)
Q Consensus 154 ~~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~---~~~~CP~CR 200 (370)
++..|.||.+.-+..+.+.--.|...||..|++.++.. ..-.||.|+
T Consensus 6 ~~~~C~~C~~~g~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~W~C~~C~ 55 (111)
T 2ysm_A 6 SGANCAVCDSPGDLLDQFFCTTCGQHYHGMCLDIAVTPLKRAGWQCPECK 55 (111)
T ss_dssp CCSCBTTTCCCCCTTTSEECSSSCCEECTTTTTCCCCTTTSTTCCCTTTC
T ss_pred CCCCCcCCCCCCCCcCCeECCCCCCCcChHHhCCccccccccCccCCcCC
Confidence 35789999876433334565669999999999877642 223366654
No 95
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=79.84 E-value=0.38 Score=42.08 Aligned_cols=45 Identities=31% Similarity=0.553 Sum_probs=32.1
Q ss_pred CcccccccccccCCCeeEEeCCCCcccHhHHHHHHhc---CCCCCcccccc
Q 017521 155 SRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTS---WRTFCPVCKRD 202 (370)
Q Consensus 155 ~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~---~~~~CP~CR~~ 202 (370)
+..|.||.+. |+.+..=.|.-.||..|+++-|.. ..-.||.|+..
T Consensus 4 ~~~C~~C~~~---g~ll~Cd~C~~~~H~~C~~p~l~~~p~~~W~C~~C~~~ 51 (184)
T 3o36_A 4 EDWCAVCQNG---GELLCCEKCPKVFHLSCHVPTLTNFPSGEWICTFCRDL 51 (184)
T ss_dssp CSSCTTTCCC---SSCEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCS
T ss_pred CCccccCCCC---CeeeecCCCCcccCccccCCCCCCCCCCCEECccccCc
Confidence 4679999854 554444458899999999876654 22359999764
No 96
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=78.36 E-value=0.24 Score=34.93 Aligned_cols=45 Identities=27% Similarity=0.621 Sum_probs=31.1
Q ss_pred CCcccccccccccCCCeeEEeCCCCcccHhHHHHHHhc---CCCCCccccc
Q 017521 154 TSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTS---WRTFCPVCKR 201 (370)
Q Consensus 154 ~~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~---~~~~CP~CR~ 201 (370)
.+..|.||.+. ++.+..-.|...||..|+++-|.. ..-.||.|+.
T Consensus 8 ~~~~C~vC~~~---g~ll~Cd~C~~~~H~~Cl~ppl~~~p~g~W~C~~C~~ 55 (56)
T 2yql_A 8 HEDFCSVCRKS---GQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQD 55 (56)
T ss_dssp SCCSCSSSCCS---SCCEECSSSSCEECSSSSSSCCCSCCCSSCCCHHHHC
T ss_pred CCCCCccCCCC---CeEEEcCCCCcceECccCCCCcCCCCCCceEChhhhC
Confidence 45789999874 455554458999999999864443 2234888854
No 97
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=78.14 E-value=0.47 Score=37.43 Aligned_cols=46 Identities=20% Similarity=0.245 Sum_probs=31.9
Q ss_pred CcccccccccccCCCeeEEeCCCCcccHhHHHHHHhc--CCCCCccccc
Q 017521 155 SRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTS--WRTFCPVCKR 201 (370)
Q Consensus 155 ~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~--~~~~CP~CR~ 201 (370)
...| ||......+..|..-.|.-.||..|+..=+.. ..-.||.|+.
T Consensus 28 ~vrC-iC~~~~~~~~mi~Cd~C~~w~H~~C~~~~~~~~p~~w~C~~C~~ 75 (98)
T 2lv9_A 28 VTRC-ICGFTHDDGYMICCDKCSVWQHIDCMGIDRQHIPDTYLCERCQP 75 (98)
T ss_dssp BCCC-TTSCCSCSSCEEEBTTTCBEEETTTTTCCTTSCCSSBCCTTTSS
T ss_pred CEEe-ECCCccCCCcEEEcCCCCCcCcCcCCCCCccCCCCCEECCCCcC
Confidence 3567 89877766666665569999999998753222 1235999963
No 98
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=77.53 E-value=0.37 Score=34.91 Aligned_cols=49 Identities=27% Similarity=0.596 Sum_probs=32.9
Q ss_pred CCcccccccccccC--CCeeEEeCCCCcccHhHHHHHHh------cCCCCCcccccc
Q 017521 154 TSRTCAICLEDYSV--GEKLRILPCRHKFHAFCVDSWLT------SWRTFCPVCKRD 202 (370)
Q Consensus 154 ~~~~C~ICLe~~~~--~~~v~~lpC~H~FH~~Ci~~Wl~------~~~~~CP~CR~~ 202 (370)
+...|.||...... ++.|..-.|.-.||..|+..=+. ...-.||.|+..
T Consensus 5 ~~~~C~vC~~~~~~~~~~ll~Cd~C~~~~H~~C~~p~l~~~~~~p~~~W~C~~C~~~ 61 (66)
T 2yt5_A 5 SSGVCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCVFA 61 (66)
T ss_dssp CCCCBSSSCCCCCBTTBCEEECSSSCCEEETTTSSSCCCHHHHHSSCCCCCHHHHHT
T ss_pred CCCCCCCCCCCCCCCCCCEEECCCCChHHHhhhCCCcccccccCCCCCEECCCCcCc
Confidence 45789999987533 34444444899999999886432 123459999754
No 99
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=77.43 E-value=2 Score=36.27 Aligned_cols=47 Identities=21% Similarity=0.486 Sum_probs=32.7
Q ss_pred cCCCcccccccccccCCCeeEEeCCCCcccHhHHHHHHh----------cCCCCCccccc
Q 017521 152 NCTSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLT----------SWRTFCPVCKR 201 (370)
Q Consensus 152 ~~~~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~----------~~~~~CP~CR~ 201 (370)
+..+..|.||.+. |+.+..=.|.-.||..||++=|. ...-.||+|+.
T Consensus 60 Dg~~d~C~vC~~G---G~LlcCD~Cpr~Fh~~Cl~p~l~~~~l~~i~~p~~~W~C~~C~~ 116 (142)
T 2lbm_A 60 DGMDEQCRWCAEG---GNLICCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHP 116 (142)
T ss_dssp TSCBCSCSSSCCC---SSEEECSSSCCEEEHHHHHHHTCHHHHHHHHTSTTCCCCTTTCC
T ss_pred CCCCCeecccCCC---CcEEeCCCCCCeeeHhhcCCCCChhhhhhcccCCCCCEeecccC
Confidence 3446789999874 55444445899999999996552 12335999964
No 100
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=76.74 E-value=1.7 Score=34.92 Aligned_cols=46 Identities=24% Similarity=0.462 Sum_probs=30.1
Q ss_pred Ccccccccccc------cCCCeeEEeCCCCcccHhHHHH------HHhcCCCCCcccc
Q 017521 155 SRTCAICLEDY------SVGEKLRILPCRHKFHAFCVDS------WLTSWRTFCPVCK 200 (370)
Q Consensus 155 ~~~C~ICLe~~------~~~~~v~~lpC~H~FH~~Ci~~------Wl~~~~~~CP~CR 200 (370)
...|.+|+..= ..++.+.--.|+..||..|++. .+....-.||.|+
T Consensus 5 ~~~C~~C~~~~~~~~~g~~~~Ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 62 (112)
T 3v43_A 5 IPICSFCLGTKEQNREKKPEELISCADCGNSGHPSCLKFSPELTVRVKALRWQCIECK 62 (112)
T ss_dssp CSSBTTTCCCTTCCTTSCCCCCEECTTTCCEECHHHHTCCHHHHHHHHTSCCCCTTTC
T ss_pred CccccccCCchhhCcCCCchhceEhhhcCCCCCCchhcCCHHHHHHhhccccccccCC
Confidence 46799998762 2334555556999999999963 2333334477774
No 101
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=76.54 E-value=0.28 Score=35.03 Aligned_cols=48 Identities=25% Similarity=0.569 Sum_probs=33.1
Q ss_pred CCcccccccccccCCCeeEEeCCCCcccHhHHHHHHhc---CCCCCcccccccc
Q 017521 154 TSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTS---WRTFCPVCKRDAR 204 (370)
Q Consensus 154 ~~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~---~~~~CP~CR~~i~ 204 (370)
.+..|.||.+. ++.+..-.|.-.||..|+++=|.. ..-.||.|+....
T Consensus 4 ~~~~C~vC~~~---g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~~~ 54 (60)
T 2puy_A 4 HEDFCSVCRKS---GQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQML 54 (60)
T ss_dssp CCSSCTTTCCC---SSCEECSSSSCEECGGGSSSCCSSCCCSCCCCHHHHHHHH
T ss_pred CCCCCcCCCCC---CcEEEcCCCCcCEECCcCCCCcCCCCCCceEChhccChhh
Confidence 35689999874 555555558999999999864443 2235999976543
No 102
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=75.18 E-value=1.4 Score=33.12 Aligned_cols=48 Identities=23% Similarity=0.380 Sum_probs=31.9
Q ss_pred Cccccccccccc-CCCeeEEeCCCCcccHhHHHHHHh----cCCCCCccccccc
Q 017521 155 SRTCAICLEDYS-VGEKLRILPCRHKFHAFCVDSWLT----SWRTFCPVCKRDA 203 (370)
Q Consensus 155 ~~~C~ICLe~~~-~~~~v~~lpC~H~FH~~Ci~~Wl~----~~~~~CP~CR~~i 203 (370)
...| ||...+. .+..|..--|...||..|+..-.. ...-.||.|+..-
T Consensus 12 ~~~C-~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~~ 64 (79)
T 1wep_A 12 PVYC-LCRQPYNVNHFMIECGLCQDWFHGSCVGIEEENAVDIDIYHCPDCEAVF 64 (79)
T ss_dssp CCCS-TTSCSCCSSSCEEEBTTTCCEEEHHHHTCCHHHHTTCSBBCCTTTTTTS
T ss_pred ccEE-EcCCccCCCCceEEcCCCCCcEEeeecCcccccccCCCeEECCCccccc
Confidence 3556 9998875 344555556999999999853211 1244599997643
No 103
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=73.14 E-value=0.86 Score=33.13 Aligned_cols=46 Identities=26% Similarity=0.548 Sum_probs=31.9
Q ss_pred CCcccccccccccCCCeeEEeCCCCcccHhHHHHHHhc---CCCCCcccccc
Q 017521 154 TSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTS---WRTFCPVCKRD 202 (370)
Q Consensus 154 ~~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~---~~~~CP~CR~~ 202 (370)
.+..|.||.+. ++.|..-.|.-.||..|+.+-|.. ..-.||.|+..
T Consensus 7 ~~~~C~vC~~~---g~ll~CD~C~~~fH~~Cl~ppl~~~P~g~W~C~~C~~~ 55 (66)
T 1xwh_A 7 NEDECAVCRDG---GELICCDGCPRAFHLACLSPPLREIPSGTWRCSSCLQA 55 (66)
T ss_dssp CCCSBSSSSCC---SSCEECSSCCCEECTTTSSSCCSSCCSSCCCCHHHHHT
T ss_pred CCCCCccCCCC---CCEEEcCCCChhhcccccCCCcCcCCCCCeECccccCc
Confidence 35789999864 454554458899999999864443 22359999653
No 104
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=72.91 E-value=1.5 Score=34.27 Aligned_cols=45 Identities=33% Similarity=0.714 Sum_probs=28.8
Q ss_pred CCcccccccccccCCCeeEEeC--CC-CcccHhHHHHHHhc---CCCCCcccccc
Q 017521 154 TSRTCAICLEDYSVGEKLRILP--CR-HKFHAFCVDSWLTS---WRTFCPVCKRD 202 (370)
Q Consensus 154 ~~~~C~ICLe~~~~~~~v~~lp--C~-H~FH~~Ci~~Wl~~---~~~~CP~CR~~ 202 (370)
+...| ||..... ++.|..=. |. ..||..|+. |.. .+-.||.|+..
T Consensus 35 e~~yC-iC~~~~~-g~MI~CD~~dC~~~WfH~~CVg--l~~~p~g~W~Cp~C~~~ 85 (91)
T 1weu_A 35 EPTYC-LCHQVSY-GEMIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQE 85 (91)
T ss_dssp CCBCS-TTCCBCC-SCCCCCSCSSCSCCCCCSTTTT--CSSCCCSSCCCTTTCCC
T ss_pred CCcEE-ECCCCCC-CCEeEecCCCCCCCCEecccCC--cCcCCCCCEECcCccCc
Confidence 34567 9988653 44444334 54 689999997 333 23459999764
No 105
>2cs3_A Protein C14ORF4, MY039 protein; ZF-C3HC4 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.3
Probab=72.07 E-value=3.9 Score=31.11 Aligned_cols=36 Identities=25% Similarity=0.427 Sum_probs=28.6
Q ss_pred CcccccccccccCCCeeEEeC--CCCcccHhHHHHHHhc
Q 017521 155 SRTCAICLEDYSVGEKLRILP--CRHKFHAFCVDSWLTS 191 (370)
Q Consensus 155 ~~~C~ICLe~~~~~~~v~~lp--C~H~FH~~Ci~~Wl~~ 191 (370)
...|.+|.|.+++..-|. -| =.|.|+..|-...+++
T Consensus 15 ~l~CtlC~erLEdtHFVQ-CPsv~~HkFCFpCsr~sIk~ 52 (93)
T 2cs3_A 15 PLCCTICHERLEDTHFVQ-CPSVPSHKFCFPCSRESIKA 52 (93)
T ss_dssp SCCCSSSCSCCSSTTSEE-CSSCSSCEECHHHHHHHHHH
T ss_pred eeEeecchhhhccCceee-CCCccCCeeeccccHHHHHh
Confidence 468999999998765544 33 3799999999988876
No 106
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=72.04 E-value=1.7 Score=33.72 Aligned_cols=46 Identities=22% Similarity=0.450 Sum_probs=32.0
Q ss_pred CCcccccccccccCCCeeEEeCCCCcccHhHHHHHHhc---CCCCCcccccc
Q 017521 154 TSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTS---WRTFCPVCKRD 202 (370)
Q Consensus 154 ~~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~---~~~~CP~CR~~ 202 (370)
....|.||.+. ++.+..-.|.-.||..|+++=|.. ..-.||.|+..
T Consensus 24 n~~~C~vC~~~---g~LL~CD~C~~~fH~~Cl~PpL~~~P~g~W~C~~C~~~ 72 (88)
T 1fp0_A 24 SATICRVCQKP---GDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVL 72 (88)
T ss_dssp SSSCCSSSCSS---SCCEECTTSSCEECTTSSSTTCCCCCSSSCCCCSCCCC
T ss_pred CCCcCcCcCCC---CCEEECCCCCCceecccCCCCCCCCcCCCcCCccccCC
Confidence 45789999864 444444458889999999775543 12359999753
No 107
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=71.68 E-value=0.58 Score=37.44 Aligned_cols=48 Identities=21% Similarity=0.434 Sum_probs=32.0
Q ss_pred CcccccccccccCCCe-eEEe-CCCCcccHhHHHHH------H---hcCCCCCcccccc
Q 017521 155 SRTCAICLEDYSVGEK-LRIL-PCRHKFHAFCVDSW------L---TSWRTFCPVCKRD 202 (370)
Q Consensus 155 ~~~C~ICLe~~~~~~~-v~~l-pC~H~FH~~Ci~~W------l---~~~~~~CP~CR~~ 202 (370)
...|.||...+...+. +..= .|.-.||..|+..- + ...+-.||.|+..
T Consensus 3 ~~~C~iC~~p~~~~~~mi~Cdd~C~~WfH~~CVglt~~~~~~i~~~~~~~~~Cp~C~~~ 61 (105)
T 2xb1_A 3 VYPCGACRSEVNDDQDAILCEASCQKWFHRECTGMTESAYGLLTTEASAVWACDLCLKT 61 (105)
T ss_dssp CCBCTTTCSBCCTTSCEEECTTTTCCEEEGGGTTCCHHHHHHHHHCTTEEECCHHHHHT
T ss_pred cCCCCCCCCccCCCCCEEEecCCcccccccccCCcCHHHHHhhccCCCCCEECccccCc
Confidence 3579999999866543 3333 48889999998522 1 0023459999864
No 108
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=71.48 E-value=1.9 Score=31.88 Aligned_cols=45 Identities=33% Similarity=0.714 Sum_probs=28.6
Q ss_pred CCcccccccccccCCCeeEEeC--CC-CcccHhHHHHHHhc---CCCCCcccccc
Q 017521 154 TSRTCAICLEDYSVGEKLRILP--CR-HKFHAFCVDSWLTS---WRTFCPVCKRD 202 (370)
Q Consensus 154 ~~~~C~ICLe~~~~~~~v~~lp--C~-H~FH~~Ci~~Wl~~---~~~~CP~CR~~ 202 (370)
+...| ||..... ++.|..=. |. ..||..|+. |.. .+-.||.|+..
T Consensus 15 ~~~~C-~C~~~~~-g~MI~CD~~~C~~~wfH~~Cvg--l~~~p~g~w~Cp~C~~~ 65 (71)
T 1wen_A 15 EPTYC-LCHQVSY-GEMIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQE 65 (71)
T ss_dssp SCCCS-TTCCCSC-SSEECCSCSSCSCCCEETTTTT--CSSCCSSCCCCTTTSSC
T ss_pred CCCEE-ECCCCCC-CCEeEeeCCCCCCccEecccCC--cCcCCCCCEECCCCCcc
Confidence 34567 8987643 54443333 55 689999997 333 23459999764
No 109
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=71.05 E-value=1.4 Score=33.12 Aligned_cols=47 Identities=17% Similarity=0.352 Sum_probs=32.3
Q ss_pred CcccccccccccCCCeeEEe--CCCCcccHhHHHHHHhc--------CCCCCcccccc
Q 017521 155 SRTCAICLEDYSVGEKLRIL--PCRHKFHAFCVDSWLTS--------WRTFCPVCKRD 202 (370)
Q Consensus 155 ~~~C~ICLe~~~~~~~v~~l--pC~H~FH~~Ci~~Wl~~--------~~~~CP~CR~~ 202 (370)
...| ||......+..|..= .|...||..|+.---.. .+-.||.|+..
T Consensus 16 ~~~C-iC~~~~~~g~MI~CD~~~C~~W~H~~CVgi~~~~~~~~~~~~~~~~C~~C~~~ 72 (78)
T 1wew_A 16 KVRC-VCGNSLETDSMIQCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEICRLT 72 (78)
T ss_dssp CCCC-SSCCCCCCSCEEECSSTTTCCEEEHHHHSCCCTTTCSCSCSCSSCCCHHHHHC
T ss_pred CEEe-ECCCcCCCCCEEEECCccCCccccCEEEccccccccccccCCCCEECCCCCcc
Confidence 4667 898876666666655 69999999998632111 23459999764
No 110
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=70.73 E-value=0.82 Score=33.61 Aligned_cols=47 Identities=17% Similarity=0.417 Sum_probs=31.6
Q ss_pred CCcccccccccccCCCeeEEeCCCCcccHhHHHHHHhc--CCCCCccccc
Q 017521 154 TSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTS--WRTFCPVCKR 201 (370)
Q Consensus 154 ~~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~--~~~~CP~CR~ 201 (370)
+...| ||...+..+..|..-.|...||..|+..--.. ..-.||.|+.
T Consensus 18 ~~~~C-iC~~~~~~~~MIqCd~C~~WfH~~Cvgi~~~~~~~~~~C~~C~~ 66 (68)
T 3o70_A 18 GLVTC-FCMKPFAGRPMIECNECHTWIHLSCAKIRKSNVPEVFVCQKCRD 66 (68)
T ss_dssp TCCCS-TTCCCCTTCCEEECTTTCCEEETTTTTCCTTSCCSSCCCHHHHT
T ss_pred CceEe-ECCCcCCCCCEEECCCCCccccccccCcCcccCCCcEECCCCCC
Confidence 34678 99887664445665569999999998642211 2345999964
No 111
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=70.39 E-value=3.6 Score=34.14 Aligned_cols=47 Identities=23% Similarity=0.511 Sum_probs=30.6
Q ss_pred cCCCcccccccccccCCCeeEEeCCCCcccHhHHHHHH------h----cCCCCCccccc
Q 017521 152 NCTSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWL------T----SWRTFCPVCKR 201 (370)
Q Consensus 152 ~~~~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl------~----~~~~~CP~CR~ 201 (370)
+..+..|.||.+. ++-+-.=.|-..||..||++=+ . ...=.|++|+.
T Consensus 54 Dg~~~~C~vC~dG---G~LlcCd~Cpr~Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~~C~~ 110 (129)
T 3ql9_A 54 DGMDEQCRWCAEG---GNLICCDFCHNAFCKKCILRNLGRRELSTIMDENNQWYCYICHP 110 (129)
T ss_dssp TSCBSSCTTTCCC---SEEEECSSSSCEEEHHHHHHHTCHHHHHHHTCTTSCCCCTTTCC
T ss_pred CCCCCcCeecCCC---CeeEecCCCchhhhHHHhCCCcchhHHHHhccCCCCeEcCCcCC
Confidence 3445779999864 4333322488999999999742 1 12235999954
No 112
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=69.38 E-value=1.4 Score=30.36 Aligned_cols=44 Identities=18% Similarity=0.282 Sum_probs=28.9
Q ss_pred ccccccccccCCC-eeEEe-CCCCcccHhHHHHHH---hcCCCCCcccc
Q 017521 157 TCAICLEDYSVGE-KLRIL-PCRHKFHAFCVDSWL---TSWRTFCPVCK 200 (370)
Q Consensus 157 ~C~ICLe~~~~~~-~v~~l-pC~H~FH~~Ci~~Wl---~~~~~~CP~CR 200 (370)
.|.+|...+.+++ .|..- .|.--||..|+..-. ...+-.||.|+
T Consensus 4 ~cc~C~~p~~~~~~mI~Cd~~C~~WfH~~Cvgl~~~~~~~~~~~C~~C~ 52 (52)
T 2kgg_A 4 AAQNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINCA 52 (52)
T ss_dssp SCTTCCCCCCTTCCEEECTTTTCCEEETTTTTCCHHHHHHSCCCCSCC-
T ss_pred cCCCCcCccCCCCcEEEeCCCCCccCcccccCCCccccCCCCEECCCCC
Confidence 5788988886544 34444 588899999985321 12455699985
No 113
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=67.92 E-value=0.52 Score=36.77 Aligned_cols=49 Identities=24% Similarity=0.421 Sum_probs=32.8
Q ss_pred CCcccccccccccCCCeeEEeCCCCcccHhHHHHHHhc---CCCCCcccccc
Q 017521 154 TSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTS---WRTFCPVCKRD 202 (370)
Q Consensus 154 ~~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~---~~~~CP~CR~~ 202 (370)
+...|.||...-..++.|..=.|...||..|+.+=|.. ..=.||.|+..
T Consensus 15 ~~~~C~vC~~~~~~~~ll~CD~C~~~~H~~Cl~Ppl~~~P~g~W~C~~C~~~ 66 (92)
T 2e6r_A 15 DSYICQVCSRGDEDDKLLFCDGCDDNYHIFCLLPPLPEIPRGIWRCPKCILA 66 (92)
T ss_dssp CCCCCSSSCCSGGGGGCEECTTTCCEECSSSSSSCCSSCCSSCCCCHHHHHH
T ss_pred CCCCCccCCCcCCCCCEEEcCCCCchhccccCCCCcccCCCCCcCCccCcCc
Confidence 35689999877544444444458999999999853332 22349999764
No 114
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=67.53 E-value=1.3 Score=38.06 Aligned_cols=47 Identities=21% Similarity=0.425 Sum_probs=31.5
Q ss_pred CcccccccccccCC-CeeEEeCCCCcccHhHHHHHHh----cCCCCCcccccc
Q 017521 155 SRTCAICLEDYSVG-EKLRILPCRHKFHAFCVDSWLT----SWRTFCPVCKRD 202 (370)
Q Consensus 155 ~~~C~ICLe~~~~~-~~v~~lpC~H~FH~~Ci~~Wl~----~~~~~CP~CR~~ 202 (370)
...| ||...+..+ ..|..-.|.-.||..|+..-.. ...-.||.|+..
T Consensus 8 ~~~C-~C~~~~~~~~~mi~Cd~C~~WfH~~Cv~~~~~~~~~~~~~~C~~C~~~ 59 (174)
T 2ri7_A 8 KLYC-ICKTPEDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQST 59 (174)
T ss_dssp CEET-TTTEECCTTSCEEECTTTCCEEEHHHHTCCHHHHTTCSSCCCHHHHHH
T ss_pred CcEe-eCCCCCCCCCCEeECCCCCchhChhhcCCchhhccCccCeecCCCcch
Confidence 4678 999887533 3455555899999999953211 123459999764
No 115
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=66.65 E-value=0.99 Score=39.81 Aligned_cols=45 Identities=22% Similarity=0.448 Sum_probs=31.4
Q ss_pred CcccccccccccCCCeeEEeCCCCcccHhHHHHHHhc---CCCCCcccccc
Q 017521 155 SRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTS---WRTFCPVCKRD 202 (370)
Q Consensus 155 ~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~---~~~~CP~CR~~ 202 (370)
+..|.+|.+. ++.+..-.|.-.||..|+++=+.. ..-.||.|+..
T Consensus 2 ~~~C~~C~~~---g~ll~Cd~C~~~~H~~Cl~p~l~~~p~g~W~C~~C~~~ 49 (189)
T 2ro1_A 2 ATICRVCQKP---GDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVL 49 (189)
T ss_dssp CCCBTTTCCC---SSCCCCTTTCCBCCSTTSTTCCSSCCCTTCCTTTTSCS
T ss_pred CCcCccCCCC---CceeECCCCCchhccccCCCCcccCCCCCCCCcCccCC
Confidence 3579999854 555555558899999999764433 22359999764
No 116
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=66.18 E-value=1.2 Score=34.46 Aligned_cols=52 Identities=17% Similarity=0.326 Sum_probs=32.4
Q ss_pred CCcccccccccc--cCCCeeEEeCCCCcccHhHHHHHHh-cCCCCCccccccccc
Q 017521 154 TSRTCAICLEDY--SVGEKLRILPCRHKFHAFCVDSWLT-SWRTFCPVCKRDART 205 (370)
Q Consensus 154 ~~~~C~ICLe~~--~~~~~v~~lpC~H~FH~~Ci~~Wl~-~~~~~CP~CR~~i~~ 205 (370)
++..|.||.+.- ..++.|..-.|.-.||..|+..-+. ...-.||.|+.....
T Consensus 24 ~~~~C~vC~~~~s~~~~~ll~CD~C~~~fH~~Cl~p~~vP~g~W~C~~C~~~~~~ 78 (88)
T 2l43_A 24 EDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPYIPEGQWLCRHCLQSRAR 78 (88)
T ss_dssp CCCCCSSCCSSSSCSEEEEEECSSSCCCCCHHHHTCSSCCSSCCCCHHHHHHTTS
T ss_pred CCCcCCcCCCCCCCCCCCEEECCCCCchhhcccCCCCccCCCceECccccCccch
Confidence 357899998753 2222333334888999999975321 123359999765443
No 117
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=65.33 E-value=0.85 Score=34.44 Aligned_cols=46 Identities=30% Similarity=0.710 Sum_probs=28.1
Q ss_pred ccccccccccCCCeeEEeCCCCcccHhHHHHHHhc---CC-CCCcccccc
Q 017521 157 TCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTS---WR-TFCPVCKRD 202 (370)
Q Consensus 157 ~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~---~~-~~CP~CR~~ 202 (370)
.|.||.+.-..++.+..=.|...||..|+++-|.. .. =.||.|+.+
T Consensus 28 ~C~vC~~~~d~~~ll~CD~C~~~yH~~Cl~PpL~~~P~g~~W~C~~C~~d 77 (77)
T 3shb_A 28 ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRND 77 (77)
T ss_dssp SBTTTCCCSCGGGEEECTTTCCEEETTTSSSCCSSCCSSSCCCCTTTC--
T ss_pred cCCccCCCCCCcceeEeCCCCCccCcccCCCcccCCCCCCceECcCcccc
Confidence 57777665433333333348899999999865543 11 359999753
No 118
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=65.30 E-value=1.6 Score=33.60 Aligned_cols=50 Identities=18% Similarity=0.506 Sum_probs=33.2
Q ss_pred CcccccccccccC--CCeeEEeCCCCcccHhHHHHHHhc-------CCCCCcccccccc
Q 017521 155 SRTCAICLEDYSV--GEKLRILPCRHKFHAFCVDSWLTS-------WRTFCPVCKRDAR 204 (370)
Q Consensus 155 ~~~C~ICLe~~~~--~~~v~~lpC~H~FH~~Ci~~Wl~~-------~~~~CP~CR~~i~ 204 (370)
...|.||...-.. ++.|..=.|...||..|+++=|.. ..-.|+.|+....
T Consensus 16 ~~~C~vC~~~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~~~~~p~g~W~C~~C~~~~~ 74 (88)
T 1wev_A 16 GLACVVCRQMTVASGNQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCARCTRQMK 74 (88)
T ss_dssp CCSCSSSCCCCCCTTCCEEECSSSCCEEETTTSSSCCCHHHHHCTTCCCCCHHHHHHHC
T ss_pred CCcCCCCCCCCCCCCCceEECCCCCCeEcCccCCCcccccccCCCCCCeeCccccchhh
Confidence 4689999876432 333333348999999999875531 2335999976554
No 119
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=65.20 E-value=5.6 Score=26.71 Aligned_cols=8 Identities=13% Similarity=0.414 Sum_probs=3.2
Q ss_pred hhhhcccc
Q 017521 107 TCFFVRRH 114 (370)
Q Consensus 107 ~~~~~~r~ 114 (370)
+.+|++|+
T Consensus 31 ~~~~~RRR 38 (44)
T 2jwa_A 31 FGILIKRR 38 (44)
T ss_dssp HHHHHHHH
T ss_pred HHhheehh
Confidence 34444433
No 120
>3m62_A Ubiquitin conjugation factor E4; armadillo-like repeats, UBL conjugation pathway, DNA damage, nucleus, phosphoprotein; HET: 1PE; 2.40A {Saccharomyces cerevisiae} PDB: 3m63_A* 2qiz_A 2qj0_A
Probab=64.10 E-value=3.3 Score=45.20 Aligned_cols=49 Identities=12% Similarity=0.014 Sum_probs=40.9
Q ss_pred CCcccccccccccCCCeeEEeCCC-CcccHhHHHHHHhcCCCCCcccccccccC
Q 017521 154 TSRTCAICLEDYSVGEKLRILPCR-HKFHAFCVDSWLTSWRTFCPVCKRDARTS 206 (370)
Q Consensus 154 ~~~~C~ICLe~~~~~~~v~~lpC~-H~FH~~Ci~~Wl~~~~~~CP~CR~~i~~~ 206 (370)
+...|+|-++-|.+. .++|-| +.|-..+|..||..+. +||+=|.++...
T Consensus 890 ~~F~cPIs~~lM~DP---VilpsG~~TydR~~I~~wl~~~~-tdP~Tr~~L~~~ 939 (968)
T 3m62_A 890 DEFLDPLMYTIMKDP---VILPASKMNIDRSTIKAHLLSDS-TDPFNRMPLKLE 939 (968)
T ss_dssp GGGBCTTTCSBCSSE---EECTTTCCEEEHHHHHHHHTTCC-BCTTTCCBCCGG
T ss_pred HHhCCcchhhHHhCC---eEcCCCCEEECHHHHHHHHhcCC-CCCCCCCCCCcc
Confidence 457899999999876 678887 5899999999999844 599999888754
No 121
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=64.09 E-value=4.9 Score=29.08 Aligned_cols=32 Identities=22% Similarity=0.610 Sum_probs=24.3
Q ss_pred CcccccccccccCCCe-eEEe-CCCCcccHhHHH
Q 017521 155 SRTCAICLEDYSVGEK-LRIL-PCRHKFHAFCVD 186 (370)
Q Consensus 155 ~~~C~ICLe~~~~~~~-v~~l-pC~H~FH~~Ci~ 186 (370)
...|.+|...+..++. |..- .|.-.||..|+.
T Consensus 8 ~~~C~~C~~p~~~~~~mI~CD~~C~~WfH~~Cvg 41 (65)
T 2vpb_A 8 VYPCGICTNEVNDDQDAILCEASCQKWFHRICTG 41 (65)
T ss_dssp -CBCTTTCSBCCTTSCEEEBTTTTCCEEEHHHHT
T ss_pred cCcCccCCCccCCCCCeEecccCccccCchhccC
Confidence 4689999999876544 4444 589999999984
No 122
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=63.76 E-value=1.4 Score=33.21 Aligned_cols=46 Identities=24% Similarity=0.582 Sum_probs=30.6
Q ss_pred cccccccccccCCCeeEEeCCCCcccHhHHHHHHhc---C-CCCCccccc
Q 017521 156 RTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTS---W-RTFCPVCKR 201 (370)
Q Consensus 156 ~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~---~-~~~CP~CR~ 201 (370)
..|.||...-..++.|..=.|...||..|+++=|.. . .=.||.|+.
T Consensus 27 c~C~vC~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~ 76 (77)
T 2e6s_A 27 CSCRVCGGKHEPNMQLLCDECNVAYHIYCLNPPLDKVPEEEYWYCPSCKT 76 (77)
T ss_dssp SSCSSSCCCCCSTTEEECSSSCCEEETTSSSSCCSSCCCSSCCCCTTTCC
T ss_pred CCCcCcCCcCCCCCEEEcCCCCccccccccCCCccCCCCCCCcCCcCccC
Confidence 478999865444444444458999999999854433 1 235999865
No 123
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=63.57 E-value=2.1 Score=34.49 Aligned_cols=45 Identities=24% Similarity=0.500 Sum_probs=29.0
Q ss_pred ccccccccccc-------CCCeeEEeCCCCcccHhHHHHHH------hcCCCCCcccc
Q 017521 156 RTCAICLEDYS-------VGEKLRILPCRHKFHAFCVDSWL------TSWRTFCPVCK 200 (370)
Q Consensus 156 ~~C~ICLe~~~-------~~~~v~~lpC~H~FH~~Ci~~Wl------~~~~~~CP~CR 200 (370)
..|.||+..-. .++.+....|+..||..|++.++ ....-.||.|+
T Consensus 2 ~~C~~C~~~~~~n~k~g~~~~Li~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 59 (114)
T 2kwj_A 2 SYCDFCLGGSNMNKKSGRPEELVSCADCGRSGHPTCLQFTLNMTEAVKTYKWQCIECK 59 (114)
T ss_dssp CCCSSSCCBTTBCTTTCCCCCCEECSSSCCEECTTTTTCCHHHHHHHHHTTCCCGGGC
T ss_pred CcCccCCCCccccccCCCCCCCeEeCCCCCccchhhCCChhhhhhccCCCccCccccC
Confidence 46999987641 12445555699999999997652 22233477663
No 124
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=62.72 E-value=2 Score=34.49 Aligned_cols=46 Identities=28% Similarity=0.567 Sum_probs=30.0
Q ss_pred cccccccccc-cCCCeeEEeCCCCcccHhHHHHHHhc---CCCCCccccc
Q 017521 156 RTCAICLEDY-SVGEKLRILPCRHKFHAFCVDSWLTS---WRTFCPVCKR 201 (370)
Q Consensus 156 ~~C~ICLe~~-~~~~~v~~lpC~H~FH~~Ci~~Wl~~---~~~~CP~CR~ 201 (370)
..|.||.+.- ..++.+..-.|...||..|+++-|.. ..=.||.||.
T Consensus 62 ~~C~vC~~~~~~~~~ll~Cd~C~~~yH~~Cl~p~l~~~P~~~W~C~~C~~ 111 (112)
T 3v43_A 62 KTCSSCRDQGKNADNMLFCDSCDRGFHMECCDPPLTRMPKGMWICQICRP 111 (112)
T ss_dssp CCBTTTCCCCCTTCCCEECTTTCCEECGGGCSSCCSSCCSSCCCCTTTSC
T ss_pred CccccccCcCCCccceEEcCCCCCeeecccCCCCCCCCCCCCeECCCCCC
Confidence 4789998752 22333333348999999999865543 1235999974
No 125
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=60.28 E-value=1.3 Score=32.64 Aligned_cols=47 Identities=21% Similarity=0.297 Sum_probs=31.6
Q ss_pred CcccccccccccCCC-eeEEeCCCCcccHhHHHHHHh---cCCCCCcccccc
Q 017521 155 SRTCAICLEDYSVGE-KLRILPCRHKFHAFCVDSWLT---SWRTFCPVCKRD 202 (370)
Q Consensus 155 ~~~C~ICLe~~~~~~-~v~~lpC~H~FH~~Ci~~Wl~---~~~~~CP~CR~~ 202 (370)
...| ||......++ .|..-.|...||..|+..--. ..+-.||.|+..
T Consensus 16 ~~~C-~C~~~~~~g~~mI~Cd~C~~W~H~~Cvg~~~~~~~~~~~~C~~C~~~ 66 (72)
T 1wee_A 16 KVDC-KCGTKDDDGERMLACDGCGVWHHTRCIGINNADALPSKFLCFRCIEL 66 (72)
T ss_dssp EECC-TTCCCSCCSSCEEECSSSCEEEETTTTTCCTTSCCCSCCCCHHHHHH
T ss_pred ceEe-eCCCccCCCCcEEECCCCCCccCCeeeccCccccCCCcEECCCccCC
Confidence 4578 7988766554 555555899999999865321 123459999753
No 126
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=59.80 E-value=1.8 Score=30.81 Aligned_cols=43 Identities=35% Similarity=0.727 Sum_probs=26.6
Q ss_pred CcccccccccccCCCeeEEeC--CC-CcccHhHHHHHHhc---CCCCCccccc
Q 017521 155 SRTCAICLEDYSVGEKLRILP--CR-HKFHAFCVDSWLTS---WRTFCPVCKR 201 (370)
Q Consensus 155 ~~~C~ICLe~~~~~~~v~~lp--C~-H~FH~~Ci~~Wl~~---~~~~CP~CR~ 201 (370)
...| ||..... ++.|..=. |. ..||..|+. |.. .+-.||.|+.
T Consensus 10 ~~~C-~C~~~~~-g~mi~CD~cdC~~~wfH~~Cvg--l~~~p~g~w~C~~C~~ 58 (60)
T 2vnf_A 10 PTYC-LCHQVSY-GEMIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQ 58 (60)
T ss_dssp CEET-TTTEECC-SEEEECSCTTCSSCEEETGGGT--CSSCCSSCCCCHHHHC
T ss_pred CCEE-ECCCcCC-CCEEEeCCCCCCCceEehhcCC--CCcCCCCCEECcCccC
Confidence 4566 8987642 44333333 44 679999998 443 2345999964
No 127
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=59.74 E-value=17 Score=28.11 Aligned_cols=58 Identities=21% Similarity=0.367 Sum_probs=39.4
Q ss_pred CCcccccccccccCCC--eeE--EeCCCCcccHhHHHHHHhcCCCCCcccccccccCCCCCC
Q 017521 154 TSRTCAICLEDYSVGE--KLR--ILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTSTGEPP 211 (370)
Q Consensus 154 ~~~~C~ICLe~~~~~~--~v~--~lpC~H~FH~~Ci~~Wl~~~~~~CP~CR~~i~~~~~~~~ 211 (370)
....|.||-++..... ++. .--|+--.++.|.+-=.+..+..||.|+......+..+.
T Consensus 15 ~~qiCqiCGD~VG~~~~Ge~FVAC~eC~FPvCrpCyEYErkeG~q~CpqCktrYkr~kgsp~ 76 (93)
T 1weo_A 15 DGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERREGTQNCPQCKTRYKRLRGSPR 76 (93)
T ss_dssp SSCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHHHHHTSCSSCTTTCCCCCCCTTCCC
T ss_pred CCCccccccCccccCCCCCEEEeeeccCChhhHHHHHHHHhccCccccccCCccccccCCCC
Confidence 3478999999963321 222 223777789999987666655569999988875555544
No 128
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=57.84 E-value=1.9 Score=31.74 Aligned_cols=45 Identities=29% Similarity=0.696 Sum_probs=28.1
Q ss_pred ccccccccccCCCeeEEeCCCCcccHhHHHHHHhc---C-CCCCccccc
Q 017521 157 TCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTS---W-RTFCPVCKR 201 (370)
Q Consensus 157 ~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~---~-~~~CP~CR~ 201 (370)
.|.||...-..++.+.-=.|...||..|+++=|.. . .=.||.|+.
T Consensus 20 ~C~~C~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~ 68 (70)
T 3asl_A 20 ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 68 (70)
T ss_dssp SBTTTCCCSCGGGEEECTTTCCEEEGGGSSSCCSSCCSSSCCCCTTTSC
T ss_pred CCcCCCCcCCCCCEEEcCCCCCceecccCCCCcCCCCCCCCcCCcCccC
Confidence 56778754333333333348899999999854433 1 235999975
No 129
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=57.53 E-value=2.2 Score=30.32 Aligned_cols=43 Identities=37% Similarity=0.750 Sum_probs=27.4
Q ss_pred CcccccccccccCCCeeEEeC--CC-CcccHhHHHHHHhc---CCCCCccccc
Q 017521 155 SRTCAICLEDYSVGEKLRILP--CR-HKFHAFCVDSWLTS---WRTFCPVCKR 201 (370)
Q Consensus 155 ~~~C~ICLe~~~~~~~v~~lp--C~-H~FH~~Ci~~Wl~~---~~~~CP~CR~ 201 (370)
...| ||.+.. .++.|..=. |. ..||..|+. |.. .+-.||.|+.
T Consensus 9 ~~yC-~C~~~~-~g~mi~CD~~~C~~~wfH~~Cvg--l~~~p~~~w~Cp~C~~ 57 (59)
T 3c6w_A 9 PTYC-LCHQVS-YGEMIGCDNPDCPIEWFHFACVD--LTTKPKGKWFCPRCVQ 57 (59)
T ss_dssp CEET-TTTEEC-CSEEEECSCTTCSSCEEETGGGT--CSSCCSSCCCCHHHHC
T ss_pred CcEE-ECCCCC-CCCeeEeeCCCCCCCCEecccCC--cccCCCCCEECcCccC
Confidence 4566 998764 354444334 55 689999998 333 2335999964
No 130
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=56.84 E-value=6.3 Score=31.50 Aligned_cols=48 Identities=27% Similarity=0.493 Sum_probs=31.1
Q ss_pred CCcccccccccccCCCeeEEe--CCCCcccHhHHHHHHhc---CCCCCcccccccccC
Q 017521 154 TSRTCAICLEDYSVGEKLRIL--PCRHKFHAFCVDSWLTS---WRTFCPVCKRDARTS 206 (370)
Q Consensus 154 ~~~~C~ICLe~~~~~~~v~~l--pC~H~FH~~Ci~~Wl~~---~~~~CP~CR~~i~~~ 206 (370)
.+..|.+|.+ .++.|..= .|...||..|+. |.. ..-.||.|+-.+...
T Consensus 14 ~~~~C~~C~~---~G~ll~CD~~~Cp~~fH~~Cl~--L~~~P~g~W~Cp~c~C~~C~k 66 (107)
T 4gne_A 14 HEDYCFQCGD---GGELVMCDKKDCPKAYHLLCLN--LTQPPYGKWECPWHQCDECSS 66 (107)
T ss_dssp SCSSCTTTCC---CSEEEECCSTTCCCEECTGGGT--CSSCCSSCCCCGGGBCTTTCS
T ss_pred CCCCCCcCCC---CCcEeEECCCCCCcccccccCc--CCcCCCCCEECCCCCCCcCCC
Confidence 4578999983 34433333 377899999998 443 123499887655544
No 131
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=56.41 E-value=2.7 Score=38.15 Aligned_cols=46 Identities=28% Similarity=0.665 Sum_probs=26.9
Q ss_pred cccccccccccCCCeeEEeCCCCcccHhHHHHHHhc---C-CCCCccccc
Q 017521 156 RTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTS---W-RTFCPVCKR 201 (370)
Q Consensus 156 ~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~---~-~~~CP~CR~ 201 (370)
..|.+|...-..++.+..=.|...||..|+++=|.. . .=.||.|+.
T Consensus 175 c~C~vC~~~~~~~~lL~CD~C~~~yH~~CL~PPL~~vP~G~~W~Cp~C~~ 224 (226)
T 3ask_A 175 CACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 224 (226)
T ss_dssp TSCSSSCCCCC--CCEECSSSCCEECSCC--CCCCSCCSSSCCCCGGGC-
T ss_pred CCCcCCCCCCCCCCeEEcCCCCcceeCccCCCCcccCCCCCCCCCcCCcC
Confidence 368888765333444444458999999999954443 1 225999975
No 132
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=53.88 E-value=1.4 Score=32.18 Aligned_cols=45 Identities=22% Similarity=0.352 Sum_probs=28.0
Q ss_pred cccccccccccCCCeeEEe--CCCCcccHhHHHHHH---hc----CCCCCccccc
Q 017521 156 RTCAICLEDYSVGEKLRIL--PCRHKFHAFCVDSWL---TS----WRTFCPVCKR 201 (370)
Q Consensus 156 ~~C~ICLe~~~~~~~v~~l--pC~H~FH~~Ci~~Wl---~~----~~~~CP~CR~ 201 (370)
..| ||......+..|..= .|...||..|+.--- .. .+-.||.||.
T Consensus 11 v~C-~C~~~~~~g~mI~CD~~~C~~W~H~~Cvgi~~~~~~~~~~p~~~~C~~Cr~ 64 (68)
T 2rsd_A 11 VRC-ICSSTMVNDSMIQCEDQRCQVWQHLNCVLIPDKPGESAEVPPVFYCELCRL 64 (68)
T ss_dssp ECC-TTCCCSCCSCEEECSCTTTCEEEETTTSCCCSSTTSCCCCCSSCCCHHHHH
T ss_pred EEe-ECCCCcCCCCEEEECCCCCCCeEchhhCCCCcccccccCCCCcEECcCccC
Confidence 456 897766666555443 388889999984210 00 1345999974
No 133
>2d8v_A Zinc finger FYVE domain-containing protein 19; zfyve19, ZF- B_BOX, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.43.1.1
Probab=53.29 E-value=6.9 Score=28.57 Aligned_cols=30 Identities=33% Similarity=0.594 Sum_probs=24.5
Q ss_pred CCcccccccccccCCCeeEEeCC-CCcccHhHHHH
Q 017521 154 TSRTCAICLEDYSVGEKLRILPC-RHKFHAFCVDS 187 (370)
Q Consensus 154 ~~~~C~ICLe~~~~~~~v~~lpC-~H~FH~~Ci~~ 187 (370)
+..-|.||.++ ..+|.+.| +-+|+..|..+
T Consensus 7 e~pWC~ICneD----AtlrC~gCdgDLYC~rC~rE 37 (67)
T 2d8v_A 7 GLPWCCICNED----ATLRCAGCDGDLYCARCFRE 37 (67)
T ss_dssp CCSSCTTTCSC----CCEEETTTTSEEECSSHHHH
T ss_pred CCCeeEEeCCC----CeEEecCCCCceehHHHHHH
Confidence 35689999988 34899999 78999999766
No 134
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=52.29 E-value=12 Score=25.04 Aligned_cols=8 Identities=38% Similarity=0.750 Sum_probs=3.2
Q ss_pred hhhhcccc
Q 017521 107 TCFFVRRH 114 (370)
Q Consensus 107 ~~~~~~r~ 114 (370)
++|+++++
T Consensus 31 ~~~~~RRr 38 (44)
T 2ks1_B 31 IGLFMRRR 38 (44)
T ss_dssp HHHHHHTT
T ss_pred HHHHhhhh
Confidence 33444433
No 135
>1z60_A TFIIH basal transcription factor complex P44 subunit; basic transcription factor, zinc binding protein, ring finger; NMR {Homo sapiens} SCOP: g.49.1.2
Probab=51.72 E-value=5 Score=28.65 Aligned_cols=42 Identities=24% Similarity=0.532 Sum_probs=27.9
Q ss_pred cccccccccccCCCeeEEeCCCCcccHhHHHHHHhc-CCCCCccc
Q 017521 156 RTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTS-WRTFCPVC 199 (370)
Q Consensus 156 ~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~-~~~~CP~C 199 (370)
..|-.|+..|......+.-.|++.|+.+| |..+-. -+ +||-|
T Consensus 16 ~~C~~C~~~~~~~~~y~C~~C~~~FC~dC-D~fiHe~Lh-~CPgC 58 (59)
T 1z60_A 16 RFCYGCQGELKDQHVYVCAVCQNVFCVDC-DVFVHDSLH-SCPGC 58 (59)
T ss_dssp CEETTTTEECTTSEEECCTTTTCCBCHHH-HHTTTTTSC-SSSTT
T ss_pred CcccccCcccCCCccEECCccCcCcccch-hHHHHhhcc-CCcCC
Confidence 46999999986432233344999999999 443332 23 49988
No 136
>2cu8_A Cysteine-rich protein 2; CRP2, CRIP2, ESP1 protein, zinc-binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=51.10 E-value=9.6 Score=27.56 Aligned_cols=40 Identities=23% Similarity=0.605 Sum_probs=29.3
Q ss_pred CcccccccccccCCCeeEEeCCCCcccHhHHHHHHhcCCCCCccccccccc
Q 017521 155 SRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDART 205 (370)
Q Consensus 155 ~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~~~~~CP~CR~~i~~ 205 (370)
...|..|-+.+..++.|. .-+..||..|+ .|-.|+..|..
T Consensus 9 ~~~C~~C~~~I~~~~~v~--a~~~~~H~~CF---------~C~~C~~~L~~ 48 (76)
T 2cu8_A 9 ASKCPKCDKTVYFAEKVS--SLGKDWHKFCL---------KCERCSKTLTP 48 (76)
T ss_dssp CCBCTTTCCBCCTTTEEE--ETTEEEETTTC---------BCSSSCCBCCT
T ss_pred CCCCcCCCCEeECCeEEE--ECCeEeeCCCC---------CCCCCCCccCC
Confidence 367999999988776554 35788998882 38888777654
No 137
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=51.04 E-value=2.6 Score=28.95 Aligned_cols=42 Identities=14% Similarity=0.397 Sum_probs=27.7
Q ss_pred cccccccCCCeeEEeCCCCcccHhHHHHHHhc--CCCCCccccc
Q 017521 160 ICLEDYSVGEKLRILPCRHKFHAFCVDSWLTS--WRTFCPVCKR 201 (370)
Q Consensus 160 ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~--~~~~CP~CR~ 201 (370)
||......+..|..-.|+.-||..|+..--.. .+-.||.|+.
T Consensus 8 ~C~~~~~~~~MI~Cd~C~~W~H~~Cvgi~~~~~~~~~~C~~C~~ 51 (52)
T 3o7a_A 8 FCMKPFAGRPMIECNECHTWIHLSCAKIRKSNVPEVFVCQKCRD 51 (52)
T ss_dssp TTCCBCTTCCEEECTTTCCEEETTTTTCCGGGCCSSCCCHHHHT
T ss_pred EeCCcCCCCCEEEcCCCCccccccccCCCcccCCCcEECcCCCC
Confidence 68776554455555558999999998642221 3445999975
No 138
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=50.22 E-value=2.6 Score=33.56 Aligned_cols=45 Identities=22% Similarity=0.491 Sum_probs=29.6
Q ss_pred ccccccccccCCCeeEEeCCCCcccHhHHHHHHhc---CCCCCccccc
Q 017521 157 TCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTS---WRTFCPVCKR 201 (370)
Q Consensus 157 ~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~---~~~~CP~CR~ 201 (370)
.|.||.+.-.....+..-.|...||..|+++=|.. ..-.||.|+.
T Consensus 56 ~C~~C~~~~~~~~ll~Cd~C~~~yH~~Cl~ppl~~~P~g~W~C~~C~~ 103 (111)
T 2ysm_A 56 VCQNCKQSGEDSKMLVCDTCDKGYHTFCLQPVMKSVPTNGWKCKNCRI 103 (111)
T ss_dssp CCTTTCCCSCCTTEEECSSSCCEEEGGGSSSCCSSCCSSCCCCHHHHC
T ss_pred cccccCccCCCCCeeECCCCCcHHhHHhcCCccccCCCCCcCCcCCcC
Confidence 67888776443334444458999999999864432 2235999865
No 139
>1iml_A CRIP, cysteine rich intestinal protein; metal-binding protein, LIM domain protein; NMR {Rattus rattus} SCOP: g.39.1.3 g.39.1.3
Probab=49.39 E-value=7.6 Score=28.14 Aligned_cols=41 Identities=10% Similarity=0.083 Sum_probs=21.3
Q ss_pred CcccccccccccCCCeeEEeCCCCcccH-hHHHHHHhcCCCCCcccc
Q 017521 155 SRTCAICLEDYSVGEKLRILPCRHKFHA-FCVDSWLTSWRTFCPVCK 200 (370)
Q Consensus 155 ~~~C~ICLe~~~~~~~v~~lpC~H~FH~-~Ci~~Wl~~~~~~CP~CR 200 (370)
-..|..|...+..+.- ...=+.+|+. .|..+-+. ..|-.|.
T Consensus 27 CF~C~~C~~~L~~~~~--~~~~g~~yC~~~cy~~~f~---~~C~~C~ 68 (76)
T 1iml_A 27 CLKCEKCGKTLTSGGH--AEHEGKPYCNHPCYSAMFG---PKGFGRG 68 (76)
T ss_dssp TCBCTTTCCBCCTTTE--EEETTEEEETTTHHHHHSS---CCCSSCC
T ss_pred CCCccccCccCCCCce--ECcCCeEeeCHHHHHHHhC---ccCCCcC
Confidence 4667777766655421 1223556666 46554322 2366664
No 140
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=48.82 E-value=3.7 Score=29.43 Aligned_cols=43 Identities=33% Similarity=0.681 Sum_probs=26.9
Q ss_pred CcccccccccccCCCeeEEeC--CC-CcccHhHHHHHHhc---CCCCCccccc
Q 017521 155 SRTCAICLEDYSVGEKLRILP--CR-HKFHAFCVDSWLTS---WRTFCPVCKR 201 (370)
Q Consensus 155 ~~~C~ICLe~~~~~~~v~~lp--C~-H~FH~~Ci~~Wl~~---~~~~CP~CR~ 201 (370)
...| ||.... .++.|..=. |. ..||..|+. |.. .+-.||.|+.
T Consensus 11 ~~yC-~C~~~~-~g~MI~CD~c~C~~~WfH~~Cvg--l~~~p~~~w~Cp~C~~ 59 (62)
T 2g6q_A 11 PTYC-LCNQVS-YGEMIGCDNEQCPIEWFHFSCVS--LTYKPKGKWYCPKCRG 59 (62)
T ss_dssp CEET-TTTEEC-CSEEEECSCTTCSSCEEETGGGT--CSSCCSSCCCCHHHHT
T ss_pred CcEE-ECCCCC-CCCeeeeeCCCCCcccEecccCC--cCcCCCCCEECcCccc
Confidence 4566 998763 344443333 44 789999997 232 2345999965
No 141
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=48.51 E-value=20 Score=23.97 Aligned_cols=7 Identities=43% Similarity=0.909 Sum_probs=2.8
Q ss_pred hhhcccc
Q 017521 108 CFFVRRH 114 (370)
Q Consensus 108 ~~~~~r~ 114 (370)
++|++++
T Consensus 31 ~~~~RRR 37 (44)
T 2l2t_A 31 AVYVRRK 37 (44)
T ss_dssp HHHHHTT
T ss_pred HHHhhhh
Confidence 3444433
No 142
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=48.22 E-value=14 Score=27.18 Aligned_cols=48 Identities=19% Similarity=0.359 Sum_probs=30.9
Q ss_pred CCcccccccccc--cCCCeeEEeCCCCcccHhHHHHHHh-cCCCCCccccc
Q 017521 154 TSRTCAICLEDY--SVGEKLRILPCRHKFHAFCVDSWLT-SWRTFCPVCKR 201 (370)
Q Consensus 154 ~~~~C~ICLe~~--~~~~~v~~lpC~H~FH~~Ci~~Wl~-~~~~~CP~CR~ 201 (370)
+...|.||.+.- ..++.|..=.|.-.||..|+..-.. ...=.||.|+.
T Consensus 15 ~~~~C~vC~~~~s~~~~~ll~CD~C~~~~H~~Cl~~~~vP~g~W~C~~C~~ 65 (71)
T 2ku3_A 15 EDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPYIPEGQWLCRHCLQ 65 (71)
T ss_dssp SSCSCSSSCCCCCCSSSCEEECSSSCCEEEHHHHTCSSCCSSCCCCHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCEEECCCCCCccccccCCCCcCCCCCcCCccCcC
Confidence 457899998764 2333333334889999999975321 12335999965
No 143
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=45.94 E-value=1.9 Score=34.72 Aligned_cols=49 Identities=16% Similarity=0.426 Sum_probs=32.7
Q ss_pred cccccccccccCCCeeEEeCCCCcccHhHHHHHHhc---CCCCCcccccccc
Q 017521 156 RTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTS---WRTFCPVCKRDAR 204 (370)
Q Consensus 156 ~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~---~~~~CP~CR~~i~ 204 (370)
..|.||...-..++.+..-.|...||..|+++=|.. ..-+||.|+..+.
T Consensus 59 ~~C~~C~~~~~~~~ll~Cd~C~~~yH~~Cl~ppl~~~P~g~W~C~~C~~~~~ 110 (114)
T 2kwj_A 59 KSCILCGTSENDDQLLFCDDCDRGYHMYCLNPPVAEPPEGSWSCHLCWELLK 110 (114)
T ss_dssp CCCTTTTCCTTTTTEEECSSSCCEEETTTSSSCCSSCCSSCCCCHHHHHHHH
T ss_pred CccCcccccCCCCceEEcCCCCccccccccCCCccCCCCCCeECccccchhh
Confidence 368899876545555555558999999999853332 1234999976543
No 144
>2co8_A NEDD9 interacting protein with calponin homology and LIM domains; zinc finger protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=44.47 E-value=12 Score=27.60 Aligned_cols=41 Identities=32% Similarity=0.556 Sum_probs=29.6
Q ss_pred CCcccccccccccCCCeeEEeCCCCcccHhHHHHHHhcCCCCCccccccccc
Q 017521 154 TSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDART 205 (370)
Q Consensus 154 ~~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~~~~~CP~CR~~i~~ 205 (370)
....|..|-+.+...+.+. .-+..||..|+ .|-.|+..+..
T Consensus 14 ~~~~C~~C~~~I~~~e~v~--a~~~~wH~~CF---------~C~~C~~~L~~ 54 (82)
T 2co8_A 14 AGDLCALCGEHLYVLERLC--VNGHFFHRSCF---------RCHTCEATLWP 54 (82)
T ss_dssp SSCBCSSSCCBCCTTTBCC--BTTBCCBTTTC---------BCSSSCCBCCT
T ss_pred CCCCCcccCCCcccceEEE--ECCCeeCCCcC---------EEcCCCCCcCC
Confidence 3468999999987766654 35788999883 37777766654
No 145
>2dj7_A Actin-binding LIM protein 3; LIM domain, Zn binding protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=44.24 E-value=14 Score=27.26 Aligned_cols=39 Identities=26% Similarity=0.539 Sum_probs=29.0
Q ss_pred CcccccccccccCCCeeEEeCCCCcccHhHHHHHHhcCCCCCcccccccc
Q 017521 155 SRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDAR 204 (370)
Q Consensus 155 ~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~~~~~CP~CR~~i~ 204 (370)
...|.-|-+.+..++.+.. -+..||..|+ .|-.|+..|.
T Consensus 15 ~~~C~~C~~~I~~~~~v~a--~~~~wH~~CF---------~C~~C~~~L~ 53 (80)
T 2dj7_A 15 PSHCAGCKEEIKHGQSLLA--LDKQWHVSCF---------KCQTCSVILT 53 (80)
T ss_dssp CSCCTTTCCCCSSSCCEEE--TTEEECTTTC---------BCSSSCCBCS
T ss_pred CCCCcCcCCeeCCCeEEEE--CCcccccccC---------CcCcCCCCcC
Confidence 4689999999877766554 4678998882 3888877665
No 146
>3i2d_A E3 SUMO-protein ligase SIZ1; signal transduction, replication, ring E3, PIAS, ubiquitin, UBC9, metal-binding, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=43.06 E-value=19 Score=35.04 Aligned_cols=46 Identities=24% Similarity=0.342 Sum_probs=30.5
Q ss_pred cccccccccccCCCeeEEeCCCCcccHhHHHHHHhc----CCCCCcccccccc
Q 017521 156 RTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTS----WRTFCPVCKRDAR 204 (370)
Q Consensus 156 ~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~----~~~~CP~CR~~i~ 204 (370)
..|++=+..|.. .+|-..|.|+-|.+ ++.||.. ..-.||+|...+.
T Consensus 250 L~CPlS~~ri~~--PvRg~~C~HlQCFD-l~sfL~~~~~~~~W~CPIC~k~~~ 299 (371)
T 3i2d_A 250 LQCPISYTRMKY--PSKSINCKHLQCFD-ALWFLHSQLQIPTWQCPVCQIDIA 299 (371)
T ss_dssp SBCTTTSSBCSS--EEEETTCCSSCCEE-HHHHHHHHHHSCCCBCTTTCCBCC
T ss_pred ecCCCccccccc--cCcCCcCCCcceEC-HHHHHHHhhcCCceeCCCCCcccC
Confidence 579988887664 58888999983322 2334432 3345999988653
No 147
>2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A
Probab=40.44 E-value=16 Score=27.34 Aligned_cols=35 Identities=23% Similarity=0.536 Sum_probs=24.1
Q ss_pred CCcccccccccccCCC-eeEEeCCCCcccHhHHHHH
Q 017521 154 TSRTCAICLEDYSVGE-KLRILPCRHKFHAFCVDSW 188 (370)
Q Consensus 154 ~~~~C~ICLe~~~~~~-~v~~lpC~H~FH~~Ci~~W 188 (370)
+...|.+|...|..-. +--.-.||.+|+..|....
T Consensus 18 ~~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~Cs~~~ 53 (82)
T 2yw8_A 18 EATHCRQCEKEFSISRRKHHCRNCGHIFCNTCSSNE 53 (82)
T ss_dssp CCCBCTTTCCBCBTTBCCEECTTTCCEECSGGGCEE
T ss_pred cCCcccCcCCcccCccccccCCCCCCEEChHHhCCe
Confidence 4568999999997532 1111248999999997653
No 148
>1zfo_A LAsp-1; LIM domain, zinc-finger, metal-binding protein; NMR {Sus scrofa} SCOP: g.39.1.4
Probab=38.76 E-value=8.7 Score=23.40 Aligned_cols=28 Identities=25% Similarity=0.352 Sum_probs=20.8
Q ss_pred cccccccccccCCCeeEEeCCCCcccHhHH
Q 017521 156 RTCAICLEDYSVGEKLRILPCRHKFHAFCV 185 (370)
Q Consensus 156 ~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci 185 (370)
..|+.|-...-..|++. --+..||+.|+
T Consensus 4 ~~C~~C~k~Vy~~Ek~~--~~g~~~Hk~CF 31 (31)
T 1zfo_A 4 PNCARCGKIVYPTEKVN--CLDKFWHKACF 31 (31)
T ss_dssp CBCSSSCSBCCGGGCCC--SSSSCCCGGGC
T ss_pred CcCCccCCEEecceeEE--ECCeEecccCC
Confidence 47999988876666544 35788999884
No 149
>4fo9_A E3 SUMO-protein ligase PIAS2; E3 ligase, pinit domain, SP-ring domain, structural GE consortium, SGC; 2.39A {Homo sapiens} PDB: 2asq_B
Probab=38.13 E-value=25 Score=34.05 Aligned_cols=47 Identities=23% Similarity=0.411 Sum_probs=30.5
Q ss_pred cccccccccccCCCeeEEeCCCCc--ccHhHHHHHHhc-CCCCCcccccccc
Q 017521 156 RTCAICLEDYSVGEKLRILPCRHK--FHAFCVDSWLTS-WRTFCPVCKRDAR 204 (370)
Q Consensus 156 ~~C~ICLe~~~~~~~v~~lpC~H~--FH~~Ci~~Wl~~-~~~~CP~CR~~i~ 204 (370)
..|++=+..++. .+|-..|.|+ |-..=+-....+ ..-.||+|.+.+.
T Consensus 216 L~CPlS~~ri~~--P~Rg~~C~HlqCFDl~sfL~~~~~~~~W~CPiC~k~~~ 265 (360)
T 4fo9_A 216 LMCPLGKMRLTI--PCRAVTCTHLQCFDAALYLQMNEKKPTWICPVCDKKAA 265 (360)
T ss_dssp SBCTTTCSBCSS--EEEETTCCCCCCEEHHHHHHHHHHSCCCBCTTTCSBCC
T ss_pred eeCCCccceecc--CCcCCCCCCCccCCHHHHHHHHhhCCCeECCCCCcccC
Confidence 579988887764 5888889998 443322222222 2345999988764
No 150
>1zbd_B Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: g.50.1.1
Probab=35.75 E-value=15 Score=30.49 Aligned_cols=33 Identities=15% Similarity=0.334 Sum_probs=24.8
Q ss_pred CCccccccccccc--CCCeeEEeCCCCcccHhHHH
Q 017521 154 TSRTCAICLEDYS--VGEKLRILPCRHKFHAFCVD 186 (370)
Q Consensus 154 ~~~~C~ICLe~~~--~~~~v~~lpC~H~FH~~Ci~ 186 (370)
+...|.+|...|. .+.......|.|.+|..|-.
T Consensus 54 ~~~~C~~C~~~~g~l~~~g~~C~~C~~~VC~~C~~ 88 (134)
T 1zbd_B 54 GVNRCILCGEQLGMLGSASVVCEDCKKNVCTKCGV 88 (134)
T ss_dssp SSSBCSSSCCBCSTTSCCEEECTTTCCEEETTSEE
T ss_pred CCccccccCCCcccccCCCCCCCCCCcccccccCC
Confidence 4689999999983 23455666699999998844
No 151
>1wyh_A SLIM 2, skeletal muscle LIM-protein 2; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=33.82 E-value=34 Score=24.03 Aligned_cols=41 Identities=22% Similarity=0.539 Sum_probs=26.7
Q ss_pred CcccccccccccCCCeeEEeCCCCcccHhHHHHHHhcCCCCCccccccccc
Q 017521 155 SRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDART 205 (370)
Q Consensus 155 ~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~~~~~CP~CR~~i~~ 205 (370)
...|..|-+.+..++++ +..-+..||..|+ .|-.|+..+..
T Consensus 5 ~~~C~~C~~~I~~~~~~-~~a~~~~~H~~CF---------~C~~C~~~L~~ 45 (72)
T 1wyh_A 5 SSGCSACGETVMPGSRK-LEYGGQTWHEHCF---------LCSGCEQPLGS 45 (72)
T ss_dssp CCBCSSSCCBCCSSSCE-ECSTTCCEETTTC---------BCTTTCCBTTT
T ss_pred CCCCccCCCccccCccE-EEECccccCcccC---------eECCCCCcCCC
Confidence 35788888888764333 2235778888873 37777766643
No 152
>1g47_A Pinch protein; LIM domain, Zn finger, cell adhesion; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=33.53 E-value=32 Score=24.57 Aligned_cols=41 Identities=24% Similarity=0.532 Sum_probs=27.9
Q ss_pred CcccccccccccCCCeeEEeCCCCcccHhHHHHHHhcCCCCCccccccccc
Q 017521 155 SRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDART 205 (370)
Q Consensus 155 ~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~~~~~CP~CR~~i~~ 205 (370)
...|+-|-+.+...+.+.. .-+..||..|+ .|-.|+..+..
T Consensus 11 ~~~C~~C~~~I~~~~~~~~-a~~~~~H~~CF---------~C~~C~~~L~~ 51 (77)
T 1g47_A 11 SATCERCKGGFAPAEKIVN-SNGELYHEQCF---------VCAQCFQQFPE 51 (77)
T ss_dssp CCBCSSSCCBCCSTTTCEE-ETTEEECTTTC---------CCTTTCCCCGG
T ss_pred CCCchhcCCccCCCceEEE-eCccEeccccC---------eECCCCCCCCC
Confidence 4689999998876554422 24678898883 37777776654
No 153
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=33.50 E-value=9 Score=29.64 Aligned_cols=43 Identities=26% Similarity=0.434 Sum_probs=26.4
Q ss_pred CcccccccccccCCCeeEEeCCC---CcccHhHHHHHHhc---CCCCCcc-ccc
Q 017521 155 SRTCAICLEDYSVGEKLRILPCR---HKFHAFCVDSWLTS---WRTFCPV-CKR 201 (370)
Q Consensus 155 ~~~C~ICLe~~~~~~~v~~lpC~---H~FH~~Ci~~Wl~~---~~~~CP~-CR~ 201 (370)
...| ||..... ++.|..=.|. -.||..|+. |.. .+-.||. |+.
T Consensus 26 ~~yC-iC~~~~~-g~MI~CD~c~C~~eWfH~~CVg--l~~~p~~~W~Cp~cC~~ 75 (90)
T 2jmi_A 26 EVYC-FCRNVSY-GPMVACDNPACPFEWFHYGCVG--LKQAPKGKWYCSKDCKE 75 (90)
T ss_dssp SCCS-TTTCCCS-SSEECCCSSSCSCSCEETTTSS--CSSCTTSCCCSSHHHHH
T ss_pred CcEE-EeCCCCC-CCEEEecCCCCccccCcCccCC--CCcCCCCCccCChhhcc
Confidence 4567 9987532 4444333344 689999996 232 2345999 964
No 154
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=33.49 E-value=7.9 Score=39.08 Aligned_cols=46 Identities=24% Similarity=0.415 Sum_probs=30.3
Q ss_pred ccccccccccc-CCCeeEEeCCCCcccHhHHHHHHhc----CCCCCcccccc
Q 017521 156 RTCAICLEDYS-VGEKLRILPCRHKFHAFCVDSWLTS----WRTFCPVCKRD 202 (370)
Q Consensus 156 ~~C~ICLe~~~-~~~~v~~lpC~H~FH~~Ci~~Wl~~----~~~~CP~CR~~ 202 (370)
..| ||...+. .+..|.+--|.--||..|+.---.. ..-.||.|+..
T Consensus 38 ~yC-~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~ 88 (488)
T 3kv5_D 38 VYC-VCRQPYDVNRFMIECDICKDWFHGSCVGVEEHHAVDIDLYHCPNCAVL 88 (488)
T ss_dssp EET-TTTEECCTTSCEEEBTTTCCEEEHHHHTCCGGGGGGEEEBCCHHHHHH
T ss_pred eEE-eCCCcCCCCCCeEEccCCCCceeeeecCcCcccccCCCEEECCCCcCC
Confidence 445 9988775 3445565569999999999532111 23459999753
No 155
>1x63_A Skeletal muscle LIM-protein 1; LIM domain, four and A half LIM domains protein 1, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=31.95 E-value=36 Score=24.60 Aligned_cols=40 Identities=23% Similarity=0.422 Sum_probs=28.0
Q ss_pred cccccccccccCCCeeEEeCCCCcccHhHHHHHHhcCCCCCccccccccc
Q 017521 156 RTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDART 205 (370)
Q Consensus 156 ~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~~~~~CP~CR~~i~~ 205 (370)
..|..|-+.+..++.+. ..-+..||..|+ .|-.|+..+..
T Consensus 16 ~~C~~C~~~I~~~~~~~-~a~~~~~H~~CF---------~C~~C~~~L~~ 55 (82)
T 1x63_A 16 PKCKGCFKAIVAGDQNV-EYKGTVWHKDCF---------TCSNCKQVIGT 55 (82)
T ss_dssp CBCSSSCCBCCSSSCEE-ECSSCEEETTTC---------CCSSSCCCCTT
T ss_pred CcCccCCcccccCceEE-EECccccccccC---------chhhCCCccCC
Confidence 57999999887665532 235778998883 37778776654
No 156
>1x64_A Alpha-actinin-2 associated LIM protein; LIM domain, PDZ and LIM domain 3, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=31.95 E-value=39 Score=25.07 Aligned_cols=40 Identities=15% Similarity=0.298 Sum_probs=28.0
Q ss_pred CCcccccccccccCCCeeEEeCCCCcccHhHHHHHHhcCCCCCccccccccc
Q 017521 154 TSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDART 205 (370)
Q Consensus 154 ~~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~~~~~CP~CR~~i~~ 205 (370)
....|..|-+.+.. +.+ ..-+..||..|+ .|-.|+..|..
T Consensus 24 ~~~~C~~C~~~I~~-~~~--~a~~~~~H~~CF---------~C~~C~~~L~~ 63 (89)
T 1x64_A 24 RMPLCDKCGSGIVG-AVV--KARDKYRHPECF---------VCADCNLNLKQ 63 (89)
T ss_dssp SCCBCTTTCCBCCS-CCE--ESSSCEECTTTC---------CCSSSCCCTTT
T ss_pred cCCCcccCCCEecc-cEE--EECCceECccCC---------EecCCCCCCCC
Confidence 34689999998874 332 346788998883 37788777654
No 157
>2cor_A Pinch protein; LIM domain, particularly interesting NEW Cys- His protein, LIM and senescent cell antigen-like domains 1, structural genomics; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=31.62 E-value=25 Score=25.67 Aligned_cols=39 Identities=15% Similarity=0.346 Sum_probs=26.6
Q ss_pred CcccccccccccCCCeeEEeCCCCcccHhHHHHHHhcCCCCCccccccccc
Q 017521 155 SRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDART 205 (370)
Q Consensus 155 ~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~~~~~CP~CR~~i~~ 205 (370)
...|.-|-+.+. ++.+ ..-+..||..|+ .|-.|+..|..
T Consensus 15 ~~~C~~C~~~I~-~~~v--~a~~~~~H~~CF---------~C~~C~~~L~~ 53 (79)
T 2cor_A 15 KYICQKCHAIID-EQPL--IFKNDPYHPDHF---------NCANCGKELTA 53 (79)
T ss_dssp CCBCTTTCCBCC-SCCC--CCSSSCCCTTTS---------BCSSSCCBCCT
T ss_pred CCCCccCCCEec-ceEE--EECcceeCCCCC---------EeCCCCCccCC
Confidence 467999988877 3333 235778888873 37778776654
No 158
>2d8y_A Eplin protein; LIM domain, epithelial protein LOST in neoplasm, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=31.56 E-value=39 Score=25.15 Aligned_cols=40 Identities=28% Similarity=0.561 Sum_probs=27.4
Q ss_pred CcccccccccccCCCeeEEeCCCCcccHhHHHHHHhcCCCCCccccccccc
Q 017521 155 SRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDART 205 (370)
Q Consensus 155 ~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~~~~~CP~CR~~i~~ 205 (370)
...|.-|-+.+...+.| ..-+..||..|+ .|-.|...|..
T Consensus 15 ~~~C~~C~~~I~~~~~v--~a~~~~~H~~CF---------~C~~C~~~L~~ 54 (91)
T 2d8y_A 15 RETCVECQKTVYPMERL--LANQQVFHISCF---------RCSYCNNKLSL 54 (91)
T ss_dssp SCBCTTTCCBCCTTSEE--ECSSSEEETTTC---------BCTTTCCBCCT
T ss_pred CCcCccCCCccCCceeE--EECCCEECCCCC---------eeCCCCCCCCC
Confidence 46799998888766654 346778888883 26667666554
No 159
>1x61_A Thyroid receptor interacting protein 6; LIM domain, OPA-interacting protein 1, zyxin related protein 1 (ZRP-1), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=31.25 E-value=46 Score=23.36 Aligned_cols=38 Identities=24% Similarity=0.508 Sum_probs=20.7
Q ss_pred cccccccccccCCCeeEEeCCCCcccHhHHHHHHhcCCCCCccccccc
Q 017521 156 RTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDA 203 (370)
Q Consensus 156 ~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~~~~~CP~CR~~i 203 (370)
..|..|-+.+...+.+ +..=+..||..|+ .|-.|+..+
T Consensus 6 ~~C~~C~~~I~~~~~~-~~a~~~~~H~~CF---------~C~~C~~~L 43 (72)
T 1x61_A 6 SGCGGCGEDVVGDGAG-VVALDRVFHVGCF---------VCSTCRAQL 43 (72)
T ss_dssp CCCSSSCSCCCSSSCC-EECSSSEECTTTC---------BCSSSCCBC
T ss_pred CCCccCCCccCCCceE-EEECCCeEcccCC---------cccccCCcC
Confidence 4677777666543322 1223566776662 266666655
No 160
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=31.12 E-value=13 Score=27.42 Aligned_cols=46 Identities=24% Similarity=0.452 Sum_probs=29.7
Q ss_pred ccccccccccC-CCeeEEeCCCCcccHhHHHHHHh----cCCCCCcccccc
Q 017521 157 TCAICLEDYSV-GEKLRILPCRHKFHAFCVDSWLT----SWRTFCPVCKRD 202 (370)
Q Consensus 157 ~C~ICLe~~~~-~~~v~~lpC~H~FH~~Ci~~Wl~----~~~~~CP~CR~~ 202 (370)
.--||...+.. +..|..-.|.--||..|+..--. ...-.||.|+..
T Consensus 11 ~yCiC~~~~~~~~~MI~Cd~C~~WfH~~Cvg~~~~~~~~~~~~~C~~C~~~ 61 (75)
T 3kqi_A 11 VYCVCRLPYDVTRFMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNCEKT 61 (75)
T ss_dssp EETTTTEECCTTSCEEECTTTCCEEEHHHHTCCTTTGGGBSSCCCHHHHHH
T ss_pred eEEECCCcCCCCCCEEEcCCCCCCEecccccccccccCCCCEEECCCCccc
Confidence 34489887653 34555555899999999964221 123459999764
No 161
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=30.24 E-value=5 Score=25.44 Aligned_cols=15 Identities=13% Similarity=0.558 Sum_probs=11.2
Q ss_pred CcccccccccccCCC
Q 017521 155 SRTCAICLEDYSVGE 169 (370)
Q Consensus 155 ~~~C~ICLe~~~~~~ 169 (370)
...|+||+.++...+
T Consensus 5 GFiCP~C~~~l~s~~ 19 (34)
T 3mjh_B 5 GFICPQCMKSLGSAD 19 (34)
T ss_dssp EEECTTTCCEESSHH
T ss_pred ccCCcHHHHHcCCHH
Confidence 478999998876544
No 162
>3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens}
Probab=30.07 E-value=30 Score=26.36 Aligned_cols=52 Identities=15% Similarity=0.410 Sum_probs=32.9
Q ss_pred CCcccccccccccCCC-eeEEeCCCCcccHhHHHHHHh-----cCCCCCccccccccc
Q 017521 154 TSRTCAICLEDYSVGE-KLRILPCRHKFHAFCVDSWLT-----SWRTFCPVCKRDART 205 (370)
Q Consensus 154 ~~~~C~ICLe~~~~~~-~v~~lpC~H~FH~~Ci~~Wl~-----~~~~~CP~CR~~i~~ 205 (370)
+...|.+|...|..-. +--.-.||++|+..|...+.. .....|-.|-..+..
T Consensus 19 ~~~~C~~C~~~F~~~~RrhhCr~CG~v~C~~Cs~~~~~l~~~~~~~RVC~~C~~~l~~ 76 (90)
T 3t7l_A 19 EAPNCMNCQVKFTFTKRRHHCRACGKVFCGVCCNRKCKLQYLEKEARVCVVCYETISK 76 (90)
T ss_dssp GCCBCTTTCCBCCSSSCCEECTTTCCEECGGGSCEEEEETTTTEEEEECHHHHHHHHH
T ss_pred cCCcCcCCCCcccchhhCccccCCCCEECCcccCCeeecCCCCCCCeECHHHHHHHHH
Confidence 3468999999986532 122234999999999876532 112237777655543
No 163
>3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A*
Probab=29.68 E-value=29 Score=29.63 Aligned_cols=46 Identities=24% Similarity=0.443 Sum_probs=30.7
Q ss_pred ccCCCcccccccccccCCCeeEEe---CCCCcccHhHHHHHHhc---------CCCCCcccc
Q 017521 151 DNCTSRTCAICLEDYSVGEKLRIL---PCRHKFHAFCVDSWLTS---------WRTFCPVCK 200 (370)
Q Consensus 151 ~~~~~~~C~ICLe~~~~~~~v~~l---pC~H~FH~~Ci~~Wl~~---------~~~~CP~CR 200 (370)
++..+..|.||-+. + +|..- .|...|+..||+.++.. ..=.|=+|.
T Consensus 75 eDG~~~yC~wC~~G---g-~l~~Cdn~~C~r~FC~~CI~~nvG~~~~~~i~~~d~W~Cy~C~ 132 (159)
T 3a1b_A 75 DDGYQSYCTICCGG---R-EVLMCGNNNCCRCFCVECVDLLVGPGAAQAAIKEDPWNCYMCG 132 (159)
T ss_dssp TTSSBSSCTTTSCC---S-EEEECSSTTTCCEEEHHHHHHHTCTTHHHHHHTSSSCCCTTTC
T ss_pred CCCCcceeeEecCC---C-eEEeeCCCCCCCchhHHHHHHhcCHhHHHHHhccCCCEEEecC
Confidence 34456789999864 3 33332 38899999999988754 122388884
No 164
>3f6q_B LIM and senescent cell antigen-like-containing domain protein 1; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 2kbx_B 3ixe_B
Probab=29.22 E-value=27 Score=24.41 Aligned_cols=42 Identities=24% Similarity=0.522 Sum_probs=30.0
Q ss_pred CcccccccccccCCCeeEEeCCCCcccHhHHHHHHhcCCCCCcccccccccC
Q 017521 155 SRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTS 206 (370)
Q Consensus 155 ~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~~~~~CP~CR~~i~~~ 206 (370)
...|..|-+.+..++.+.. .=+..||..|+ .|-.|...+...
T Consensus 11 ~~~C~~C~~~i~~~e~~~~-~~~~~~H~~CF---------~C~~C~~~L~~~ 52 (72)
T 3f6q_B 11 SATCERCKGGFAPAEKIVN-SNGELYHEQCF---------VCAQCFQQFPEG 52 (72)
T ss_dssp TCBCTTTCCBCCTTCEEEE-ETTEEEETTTS---------SCTTTCCCCGGG
T ss_pred CccchhcCccccCCceEEE-eCcCeeCcCCC---------cccCCCCCCCCC
Confidence 4689999999887765432 35677998884 377887776543
No 165
>1x4k_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=28.82 E-value=40 Score=23.64 Aligned_cols=40 Identities=20% Similarity=0.439 Sum_probs=25.1
Q ss_pred cccccccccccCCCeeEEeCCCCcccHhHHHHHHhcCCCCCccccccccc
Q 017521 156 RTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDART 205 (370)
Q Consensus 156 ~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~~~~~CP~CR~~i~~ 205 (370)
..|..|-+.+...+.+.. .-+..||..|+ .|-.|+..+..
T Consensus 6 ~~C~~C~~~I~~~~~~~~-a~~~~~H~~CF---------~C~~C~~~L~~ 45 (72)
T 1x4k_A 6 SGCQECKKTIMPGTRKME-YKGSSWHETCF---------ICHRCQQPIGT 45 (72)
T ss_dssp CCBSSSCCCCCSSSCEEE-ETTEEEETTTT---------CCSSSCCCCCS
T ss_pred CCCccCCCcccCCceEEE-ECcCeecccCC---------cccccCCccCC
Confidence 568888888776543322 24667887773 37777666543
No 166
>1a7i_A QCRP2 (LIM1); LIM domain containing proteins, metal-binding protein, zinc finger; NMR {Coturnix japonica} SCOP: g.39.1.3 g.39.1.3 PDB: 2o10_A
Probab=28.58 E-value=21 Score=26.01 Aligned_cols=39 Identities=23% Similarity=0.640 Sum_probs=24.7
Q ss_pred cccccccccccCCCeeEEeCCCCcccHhHHHHHHhcCCCCCccccccccc
Q 017521 156 RTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDART 205 (370)
Q Consensus 156 ~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~~~~~CP~CR~~i~~ 205 (370)
..|..|-+.+..++.+.. -+..||..|+ .|-.|+..+..
T Consensus 8 ~~C~~C~~~I~~~~~~~a--~~~~~H~~CF---------~C~~C~~~L~~ 46 (81)
T 1a7i_A 8 NKCGACGRTVYHAEEVQC--DGRSFHRCCF---------LCMVCRKNLDS 46 (81)
T ss_dssp CBCSSSCCBCSSTTEEEE--TTEEEESSSE---------ECSSSCCEECS
T ss_pred CcCcCcCccccCceeEEe--CCcccccccC---------ccCCCCCCCCC
Confidence 568888888766664432 5677887773 26666665543
No 167
>2d8x_A Protein pinch; LIM domain, pinch protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=28.39 E-value=39 Score=23.65 Aligned_cols=39 Identities=21% Similarity=0.437 Sum_probs=24.0
Q ss_pred CcccccccccccCCCeeEEeCCCCcccHhHHHHHHhcCCCCCccccccccc
Q 017521 155 SRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDART 205 (370)
Q Consensus 155 ~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~~~~~CP~CR~~i~~ 205 (370)
...|..|-+.+.. +.+. .-+..||..|+ .|-.|+..|..
T Consensus 5 ~~~C~~C~~~I~~-~~~~--a~~~~~H~~CF---------~C~~C~~~L~~ 43 (70)
T 2d8x_A 5 SSGCHQCGEFIIG-RVIK--AMNNSWHPECF---------RCDLCQEVLAD 43 (70)
T ss_dssp SSBCSSSCCBCCS-CCEE--ETTEEECTTTS---------BCSSSCCBCSS
T ss_pred CCcCccCCCEecc-eEEE--ECcccccccCC---------EeCCCCCcCCC
Confidence 3568888877763 3332 24667887773 36777666654
No 168
>1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major}
Probab=28.22 E-value=33 Score=25.67 Aligned_cols=36 Identities=11% Similarity=0.170 Sum_probs=25.1
Q ss_pred CCCcccccccccccCCC-eeEEeCCCCcccHhHHHHH
Q 017521 153 CTSRTCAICLEDYSVGE-KLRILPCRHKFHAFCVDSW 188 (370)
Q Consensus 153 ~~~~~C~ICLe~~~~~~-~v~~lpC~H~FH~~Ci~~W 188 (370)
.+...|.+|...|..-. +--.-.||++|+..|....
T Consensus 19 ~~~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~Cs~~~ 55 (84)
T 1z2q_A 19 EDAPACNGCGCVFTTTVRRHHCRNCGYVLCGDCSRHR 55 (84)
T ss_dssp TTCCBCTTTCCBCCTTSCCEECTTTCCEECTGGGCCE
T ss_pred CCCCCCcCcCCccccchhcccccCCCcEEChHHhCCe
Confidence 34578999999997542 1112248999999997654
No 169
>1x4l_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=28.19 E-value=44 Score=23.48 Aligned_cols=40 Identities=28% Similarity=0.409 Sum_probs=27.3
Q ss_pred CcccccccccccC--CCeeEEeCCCCcccHhHHHHHHhcCCCCCcccccccc
Q 017521 155 SRTCAICLEDYSV--GEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDAR 204 (370)
Q Consensus 155 ~~~C~ICLe~~~~--~~~v~~lpC~H~FH~~Ci~~Wl~~~~~~CP~CR~~i~ 204 (370)
...|.-|-+.+.. ++++. ..-+..||..|+ .|-.|+..|.
T Consensus 5 ~~~C~~C~~~I~~~~~~~~~-~a~~~~wH~~CF---------~C~~C~~~L~ 46 (72)
T 1x4l_A 5 SSGCAGCTNPISGLGGTKYI-SFEERQWHNDCF---------NCKKCSLSLV 46 (72)
T ss_dssp SCSBTTTTBCCCCSSSCSCE-ECSSCEECTTTC---------BCSSSCCBCT
T ss_pred CCCCcCCCccccCCCCcceE-EECCcccCcccC---------EeccCCCcCC
Confidence 3579999998875 32332 236788998883 3788877765
No 170
>2dar_A PDZ and LIM domain protein 5; enigma homolog protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=27.47 E-value=57 Score=24.16 Aligned_cols=39 Identities=23% Similarity=0.369 Sum_probs=27.6
Q ss_pred CcccccccccccCCCeeEEeCCCCcccHhHHHHHHhcCCCCCccccccccc
Q 017521 155 SRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDART 205 (370)
Q Consensus 155 ~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~~~~~CP~CR~~i~~ 205 (370)
...|..|-+.+. ++.+. .-+..||..|+ .|-.|+..|..
T Consensus 25 ~~~C~~C~~~I~-~~~v~--a~~~~~H~~CF---------~C~~C~~~L~~ 63 (90)
T 2dar_A 25 TPMCAHCNQVIR-GPFLV--ALGKSWHPEEF---------NCAHCKNTMAY 63 (90)
T ss_dssp CCBBSSSCCBCC-SCEEE--ETTEEECTTTC---------BCSSSCCBCSS
T ss_pred CCCCccCCCEec-ceEEE--ECCccccccCC---------ccCCCCCCCCC
Confidence 468999999884 44333 45788998883 38888777654
No 171
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=26.59 E-value=38 Score=33.04 Aligned_cols=47 Identities=23% Similarity=0.405 Sum_probs=32.5
Q ss_pred cCCCcccccccccccCCCeeEEe--CCCCcccHhHHHHHHhc---------CCCCCccccc
Q 017521 152 NCTSRTCAICLEDYSVGEKLRIL--PCRHKFHAFCVDSWLTS---------WRTFCPVCKR 201 (370)
Q Consensus 152 ~~~~~~C~ICLe~~~~~~~v~~l--pC~H~FH~~Ci~~Wl~~---------~~~~CP~CR~ 201 (370)
+..+..|.+|-+. ++-+..= .|...||..||+.++.. ..=.|=+|.-
T Consensus 90 DG~~~yCr~C~~G---g~l~~Cdn~~C~r~FC~~Ci~~n~g~~~~~~i~~~d~W~Cf~C~p 147 (386)
T 2pv0_B 90 DGYQSYCSICCSG---ETLLICGNPDCTRCYCFECVDSLVGPGTSGKVHAMSNWVCYLCLP 147 (386)
T ss_dssp SSSBCSCTTTCCC---SSCEECCSTTCCCEECHHHHHHHTCTTHHHHHHHCSSCCCTTTSS
T ss_pred CCCcccceEcCCC---CeEEEeCCCCCCcchHHHHHHHhcChhHHHHhhccCCceEEEcCC
Confidence 3446789999864 4444444 58899999999998832 2234888854
No 172
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=25.83 E-value=37 Score=27.51 Aligned_cols=34 Identities=24% Similarity=0.481 Sum_probs=23.4
Q ss_pred CCcccccccccccCCC-eeEEeCCCCcccHhHHHH
Q 017521 154 TSRTCAICLEDYSVGE-KLRILPCRHKFHAFCVDS 187 (370)
Q Consensus 154 ~~~~C~ICLe~~~~~~-~v~~lpC~H~FH~~Ci~~ 187 (370)
+...|.+|...|..-. +--.=.||++|+..|...
T Consensus 68 ~~~~C~~C~~~Fs~~~RrHHCR~CG~vfC~~Cs~~ 102 (125)
T 1joc_A 68 EVQNCMACGKGFSVTVRRHHCRQCGNIFCAECSAK 102 (125)
T ss_dssp GCCBCTTTCCBCCSSSCCEECTTTCCEECGGGSCE
T ss_pred CCCCCcCcCCccccccccccCCCCCeEEChHHhCC
Confidence 3568999999987532 111224999999999654
No 173
>1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1
Probab=25.50 E-value=9.2 Score=31.20 Aligned_cols=46 Identities=24% Similarity=0.566 Sum_probs=28.5
Q ss_pred CcccccccccccCCC-eeEEeCCCCcccHhHHHHHHhcCCCCCccccc
Q 017521 155 SRTCAICLEDYSVGE-KLRILPCRHKFHAFCVDSWLTSWRTFCPVCKR 201 (370)
Q Consensus 155 ~~~C~ICLe~~~~~~-~v~~lpC~H~FH~~Ci~~Wl~~~~~~CP~CR~ 201 (370)
...|..|-..|..-. +--.-.||.+|+..|........+ .|-.|-.
T Consensus 19 ~~~C~~C~~~Fs~~~RkHHCR~CG~ifC~~Cs~~~~~~vR-VC~~C~~ 65 (120)
T 1y02_A 19 EPSCKSCGAHFANTARKQTCLDCKKNFCMTCSSQVGNGPR-LCLLCQR 65 (120)
T ss_dssp -CCCTTTCCCCSSGGGCEECTTTCCEECGGGEEC----CC-EEHHHHH
T ss_pred cCcccCcCCccccccccccCCCCCCeeCHHHhCCCCCCce-ECHHHHH
Confidence 468999999986421 112224999999999776544323 4888854
No 174
>1x68_A FHL5 protein; four-and-A-half LIM protein 5, zinc finger domain, AN actin- interacting protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=24.30 E-value=55 Score=23.31 Aligned_cols=39 Identities=26% Similarity=0.489 Sum_probs=26.1
Q ss_pred cccccccccccC--CCeeEEeCCCCcccHhHHHHHHhcCCCCCcccccccc
Q 017521 156 RTCAICLEDYSV--GEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDAR 204 (370)
Q Consensus 156 ~~C~ICLe~~~~--~~~v~~lpC~H~FH~~Ci~~Wl~~~~~~CP~CR~~i~ 204 (370)
..|+.|-+.+.. .+++ +..-+..||..|+ .|-.|+..+.
T Consensus 6 ~~C~~C~~~I~~~g~~~~-~~a~~~~wH~~CF---------~C~~C~~~L~ 46 (76)
T 1x68_A 6 SGCVACSKPISGLTGAKF-ICFQDSQWHSECF---------NCGKCSVSLV 46 (76)
T ss_dssp CCCTTTCCCCCTTTTCCE-EEETTEEEEGGGC---------BCTTTCCBCS
T ss_pred CCCccCCCcccCCCCcee-EEECCcccCcccC---------ChhhCCCcCC
Confidence 579999998874 2222 2335778999883 3777776664
No 175
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=24.30 E-value=43 Score=26.59 Aligned_cols=59 Identities=24% Similarity=0.347 Sum_probs=33.9
Q ss_pred CceEEEEEcC-----CCChHHHHHHHHH-cCCcE--EEEeccCCCcce-eeccCCCCCceeeEEEEec
Q 017521 2 SSAFVLTIRG-----GCSFEDKVRNAQK-AGFEA--AIVYDNEDDGVL-VAMAGNSAGIKIHAVFVSK 60 (370)
Q Consensus 2 ~~~ivLV~RG-----~CsF~~Kv~nAq~-aGA~a--vIVyn~~~~~~~-~~m~g~~~~i~IpvVfIs~ 60 (370)
.++|+|..++ .|.|-.|++...+ .|... ...+|-..+... ..+.......++|.+||..
T Consensus 15 ~~~Vvvfsk~t~~~p~Cp~C~~ak~lL~~~gv~~~~~~~~dv~~~~~~~~~l~~~sg~~tvP~vfI~g 82 (121)
T 3gx8_A 15 SAPVVLFMKGTPEFPKCGFSRATIGLLGNQGVDPAKFAAYNVLEDPELREGIKEFSEWPTIPQLYVNK 82 (121)
T ss_dssp SCSEEEEESBCSSSBCTTHHHHHHHHHHHHTBCGGGEEEEECTTCHHHHHHHHHHHTCCSSCEEEETT
T ss_pred cCCEEEEEeccCCCCCCccHHHHHHHHHHcCCCcceEEEEEecCCHHHHHHHHHHhCCCCCCeEEECC
Confidence 3679999998 8999999987665 56551 333332222111 1111001124689999964
No 176
>2l4z_A DNA endonuclease RBBP8, LIM domain transcription LMO4; protein-protein interaction, LIM-interaction DOM LMO4, RBBP8/CTIP, LIM-only protein; HET: DNA; NMR {Homo sapiens}
Probab=24.14 E-value=37 Score=27.20 Aligned_cols=39 Identities=21% Similarity=0.381 Sum_probs=28.8
Q ss_pred CcccccccccccCCCeeEEeCCCCcccHhHHHHHHhcCCCCCcccccccc
Q 017521 155 SRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDAR 204 (370)
Q Consensus 155 ~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~~~~~CP~CR~~i~ 204 (370)
...|+-|-+.+.....+. .-+..||..|+ .|-.|+..+.
T Consensus 61 ~~~C~~C~~~I~~~~~v~--a~~~~wH~~CF---------~C~~C~~~L~ 99 (123)
T 2l4z_A 61 WKRCAGCGGKIADRFLLY--AMDSYWHSRCL---------KCSSCQAQLG 99 (123)
T ss_dssp CSBBSSSSSBCCSSSEEE--ETTEEEETTTS---------BCTTTCCBGG
T ss_pred CCcCcCCCCCcCCcEEEE--eCCcEEccccc---------CcCcCCCccc
Confidence 358999999887554343 35788999882 4888988775
No 177
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=24.12 E-value=26 Score=28.20 Aligned_cols=59 Identities=24% Similarity=0.375 Sum_probs=33.8
Q ss_pred CceEEEEEcCC-----CChHHHHHHHHH-cCCc-EEEEeccCCCcce-eeccCCCCCceeeEEEEecc
Q 017521 2 SSAFVLTIRGG-----CSFEDKVRNAQK-AGFE-AAIVYDNEDDGVL-VAMAGNSAGIKIHAVFVSKA 61 (370)
Q Consensus 2 ~~~ivLV~RG~-----CsF~~Kv~nAq~-aGA~-avIVyn~~~~~~~-~~m~g~~~~i~IpvVfIs~~ 61 (370)
+++|||...|. |.|-.|++.+-+ .|.. ... +|-.++... ..|..-...-++|-|||...
T Consensus 19 ~~~VvvF~Kgt~~~P~C~fc~~ak~lL~~~gv~~~~~-~~v~~~~~~r~~l~~~sg~~TvPqIFI~g~ 85 (118)
T 2wul_A 19 KDKVVVFLKGTPEQPQCGFSNAVVQILRLHGVRDYAA-YNVLDDPELRQGIKDYSNWPTIPQVYLNGE 85 (118)
T ss_dssp HSSEEEEESBCSSSBSSHHHHHHHHHHHHTTCCSCEE-EETTSCHHHHHHHHHHHTCCSSCEEEETTE
T ss_pred cCCEEEEEcCCCCCCCCHHHHHHHHHHHHhCCcCeEe-ecccCCHHHHHHHHHhccCCCCCeEeECCE
Confidence 36899999885 999999987664 6764 232 232222111 11111111236899998654
No 178
>1wd2_A Ariadne-1 protein homolog; ring, IBR, triad, zinc finger, ligase; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=23.97 E-value=26 Score=24.78 Aligned_cols=24 Identities=21% Similarity=0.547 Sum_probs=15.6
Q ss_pred HHhcCCCCCcccccccccCCCCCC
Q 017521 188 WLTSWRTFCPVCKRDARTSTGEPP 211 (370)
Q Consensus 188 Wl~~~~~~CP~CR~~i~~~~~~~~ 211 (370)
|+..+-..||.|+..|....+..-
T Consensus 1 wi~~~~k~CP~C~~~Iek~~GCnh 24 (60)
T 1wd2_A 1 WIAANTKECPKCHVTIEKDGGCNH 24 (60)
T ss_dssp CCCCCCCCCTTTCCCCSSCCSCCS
T ss_pred CccccceECcCCCCeeEeCCCCCc
Confidence 555444459999888877665543
No 179
>1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.83 E-value=44 Score=24.94 Aligned_cols=34 Identities=21% Similarity=0.418 Sum_probs=22.9
Q ss_pred CCcccccccccccCCC-eeEEeCCCCcccHhHHHH
Q 017521 154 TSRTCAICLEDYSVGE-KLRILPCRHKFHAFCVDS 187 (370)
Q Consensus 154 ~~~~C~ICLe~~~~~~-~v~~lpC~H~FH~~Ci~~ 187 (370)
+...|.+|...|..-. +--.-.||.+|+..|...
T Consensus 13 ~~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~Cs~~ 47 (84)
T 1x4u_A 13 NFGNCTGCSATFSVLKKRRSCSNCGNSFCSRCCSF 47 (84)
T ss_dssp CCSSCSSSCCCCCSSSCCEECSSSCCEECTTTSCE
T ss_pred CCCcCcCcCCccccchhhhhhcCCCcEEChhhcCC
Confidence 4568999999986431 111124899999999543
No 180
>2zet_C Melanophilin; complex, GTP-binding protein, GTPase, G-protein, RAB, RAB27B, effector, SLP homology domain, acetylation, lipoprotein, membrane; HET: GTP; 3.00A {Mus musculus}
Probab=23.75 E-value=32 Score=29.07 Aligned_cols=47 Identities=21% Similarity=0.437 Sum_probs=30.6
Q ss_pred CCccccccccccc--CCCeeEEeCCCCcccHhHHHHHHhcC-CCCCccccc
Q 017521 154 TSRTCAICLEDYS--VGEKLRILPCRHKFHAFCVDSWLTSW-RTFCPVCKR 201 (370)
Q Consensus 154 ~~~~C~ICLe~~~--~~~~v~~lpC~H~FH~~Ci~~Wl~~~-~~~CP~CR~ 201 (370)
+...|.+|...|. .+.......|+|.+|..|= .|+... .-.|-+|+.
T Consensus 67 ~~~~C~~C~~~fg~l~~~g~~C~~C~~~VC~~C~-~~~~~~~~W~C~vC~k 116 (153)
T 2zet_C 67 NETHCARCLQPYRLLLNSRRQCLECSLFVCKSCS-HAHPEEQGWLCDPCHL 116 (153)
T ss_dssp GGTBCTTTCCBGGGCSSCCEECTTTCCEECGGGE-ECCSSSSSCEEHHHHH
T ss_pred CCccchhhcCccccccCCCCcCCCCCchhhcccc-cccCCCCcEeeHHHHH
Confidence 3589999999864 3445666679999999996 233221 112666643
No 181
>2d8z_A Four and A half LIM domains 2; skeletal muscle LIM-protein 3, LIM-domain protein DRAL, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=23.47 E-value=79 Score=21.90 Aligned_cols=37 Identities=16% Similarity=0.539 Sum_probs=24.5
Q ss_pred cccccccccccCCCeeEEeCCCCcccHhHHHHHHhcCCCCCcccccccc
Q 017521 156 RTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDAR 204 (370)
Q Consensus 156 ~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~~~~~CP~CR~~i~ 204 (370)
..|..|-+.+.. +. +..-+..||..|+ .|-.|+..|.
T Consensus 6 ~~C~~C~~~I~~-~~--~~a~~~~~H~~CF---------~C~~C~~~L~ 42 (70)
T 2d8z_A 6 SGCVQCKKPITT-GG--VTYREQPWHKECF---------VCTACRKQLS 42 (70)
T ss_dssp CBCSSSCCBCCS-SE--EESSSSEEETTTS---------BCSSSCCBCT
T ss_pred CCCcccCCeecc-ce--EEECccccCCCCC---------ccCCCCCcCC
Confidence 568888888763 33 3345778888772 3777777664
No 182
>2o35_A Hypothetical protein DUF1244; helix bundle, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.12A {Sinorhizobium meliloti} SCOP: a.293.1.1
Probab=23.24 E-value=31 Score=27.13 Aligned_cols=12 Identities=25% Similarity=0.858 Sum_probs=10.8
Q ss_pred ccHhHHHHHHhc
Q 017521 180 FHAFCVDSWLTS 191 (370)
Q Consensus 180 FH~~Ci~~Wl~~ 191 (370)
||..|+..|+..
T Consensus 43 FCRNCLskWy~~ 54 (105)
T 2o35_A 43 FCRNCLSNWYRE 54 (105)
T ss_dssp CCHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 899999999865
No 183
>3fyb_A Protein of unknown function (DUF1244); hydrocar degrading, structural genomics, PSI-2; HET: PEG; 1.80A {Alcanivorax borkumensis SK2}
Probab=23.10 E-value=32 Score=27.06 Aligned_cols=12 Identities=33% Similarity=0.913 Sum_probs=10.7
Q ss_pred ccHhHHHHHHhc
Q 017521 180 FHAFCVDSWLTS 191 (370)
Q Consensus 180 FH~~Ci~~Wl~~ 191 (370)
||..|+..|+..
T Consensus 42 FCRNCLskWy~~ 53 (104)
T 3fyb_A 42 FCRNCLAKWLME 53 (104)
T ss_dssp CCHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 899999999874
No 184
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=22.65 E-value=1.2e+02 Score=21.09 Aligned_cols=6 Identities=33% Similarity=0.977 Sum_probs=2.4
Q ss_pred chhHHH
Q 017521 87 AWSIMA 92 (370)
Q Consensus 87 ~~sIm~ 92 (370)
.|.+++
T Consensus 9 ~WiIi~ 14 (54)
T 2l8s_A 9 LWVILL 14 (54)
T ss_dssp THHHHH
T ss_pred hHHHHH
Confidence 344433
No 185
>1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1
Probab=22.45 E-value=55 Score=23.73 Aligned_cols=32 Identities=22% Similarity=0.406 Sum_probs=22.1
Q ss_pred cccccccccccCCC-eeEEeCCCCcccHhHHHH
Q 017521 156 RTCAICLEDYSVGE-KLRILPCRHKFHAFCVDS 187 (370)
Q Consensus 156 ~~C~ICLe~~~~~~-~v~~lpC~H~FH~~Ci~~ 187 (370)
..|.+|...|..-. +--.-.||.+|+..|...
T Consensus 12 ~~C~~C~~~F~~~~RrHHCR~CG~v~C~~Cs~~ 44 (73)
T 1vfy_A 12 DACMICSKKFSLLNRKHHCRSCGGVFCQEHSSN 44 (73)
T ss_dssp SBCTTTCCBCBTTBCCEECTTTCCEECGGGSCE
T ss_pred CcccCCCCccCCccccccCCCCCEEEcccccCC
Confidence 57999999987531 111123899999999653
No 186
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=22.21 E-value=20 Score=28.52 Aligned_cols=23 Identities=26% Similarity=0.680 Sum_probs=13.9
Q ss_pred eCCCCcccHhHHHHHHhcCCCCCcccccc
Q 017521 174 LPCRHKFHAFCVDSWLTSWRTFCPVCKRD 202 (370)
Q Consensus 174 lpC~H~FH~~Ci~~Wl~~~~~~CP~CR~~ 202 (370)
..||+.|. +. +. ....||.|+..
T Consensus 71 ~~CG~~F~----~~-~~-kPsrCP~CkSe 93 (105)
T 2gmg_A 71 RKCGFVFK----AE-IN-IPSRCPKCKSE 93 (105)
T ss_dssp TTTCCBCC----CC-SS-CCSSCSSSCCC
T ss_pred hhCcCeec----cc-CC-CCCCCcCCCCC
Confidence 34889881 11 12 23569999874
No 187
>1v6g_A Actin binding LIM protein 2; LIM domain, zinc binding domain, ablim2, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=21.91 E-value=55 Score=23.61 Aligned_cols=38 Identities=24% Similarity=0.543 Sum_probs=25.2
Q ss_pred cccccccccccCCCeeEEeCCCCcccHhHHHHHHhcCCCCCccccccccc
Q 017521 156 RTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDART 205 (370)
Q Consensus 156 ~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~~~~~CP~CR~~i~~ 205 (370)
..|+.|-+.+. ++.+. .-+..||..|+ .|-.|+..+..
T Consensus 16 ~~C~~C~~~I~-~~~v~--a~~~~wH~~CF---------~C~~C~~~L~~ 53 (81)
T 1v6g_A 16 TRCFSCDQFIE-GEVVS--ALGKTYHPDCF---------VCAVCRLPFPP 53 (81)
T ss_dssp CBCTTTCCBCC-SCCEE--ETTEEECTTTS---------SCSSSCCCCCS
T ss_pred CcCccccCEec-cceEE--ECCceeCccCC---------ccccCCCCCCC
Confidence 47999988877 33333 35778998883 36677666543
No 188
>2l3k_A Rhombotin-2, linker, LIM domain-binding protein 1; LMO2(LIM2)-LDB1(LID), chimera, fusion protein, oncoprotein; NMR {Mus musculus} PDB: 2l6y_B 2l6z_C
Probab=21.52 E-value=37 Score=26.96 Aligned_cols=35 Identities=20% Similarity=0.431 Sum_probs=17.9
Q ss_pred CcccccccccccCCCeeEEeCCCCcccHhHHHHHHh
Q 017521 155 SRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLT 190 (370)
Q Consensus 155 ~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~ 190 (370)
...|..|-..+..++.... .=+.+||..|....+.
T Consensus 36 CF~C~~C~~~L~~g~~f~~-~~g~~yC~~cy~~~~~ 70 (123)
T 2l3k_A 36 CFKCAACQKHFSVGDRYLL-INSDIVCEQDIYEWTK 70 (123)
T ss_dssp TCBCTTTCCBCCTTCEEEE-CSSSEEEGGGHHHHHH
T ss_pred cCccccCCCCCCCCCcEEe-eCCEEEcHHHhHHHhc
Confidence 3556666666544433322 2355566666655544
No 189
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A
Probab=21.41 E-value=44 Score=28.61 Aligned_cols=25 Identities=20% Similarity=0.348 Sum_probs=14.6
Q ss_pred eeEEeCCCCcccHhHHHHHHhcCCCCCcccccc
Q 017521 170 KLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRD 202 (370)
Q Consensus 170 ~v~~lpC~H~FH~~Ci~~Wl~~~~~~CP~CR~~ 202 (370)
..++..|||++-. .-...||+|..+
T Consensus 138 ~~~C~~CG~i~~~--------~~p~~CP~Cg~~ 162 (170)
T 3pwf_A 138 VYICPICGYTAVD--------EAPEYCPVCGAP 162 (170)
T ss_dssp EEECTTTCCEEES--------CCCSBCTTTCCB
T ss_pred eeEeCCCCCeeCC--------CCCCCCCCCCCC
Confidence 3445558887651 112359999653
No 190
>1x62_A C-terminal LIM domain protein 1; PDZ and LIM domain protein 1, LIM domain protein CLP-36, contractIle protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=21.11 E-value=51 Score=23.76 Aligned_cols=38 Identities=16% Similarity=0.283 Sum_probs=26.3
Q ss_pred CcccccccccccCCCeeEEeCCCCcccHhHHHHHHhcCCCCCcccccccc
Q 017521 155 SRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDAR 204 (370)
Q Consensus 155 ~~~C~ICLe~~~~~~~v~~lpC~H~FH~~Ci~~Wl~~~~~~CP~CR~~i~ 204 (370)
...|..|-+.+.. +. +..-+..||..|+ .|-.|+..|.
T Consensus 15 ~~~C~~C~~~I~~-~~--~~a~~~~~H~~CF---------~C~~C~~~L~ 52 (79)
T 1x62_A 15 LPMCDKCGTGIVG-VF--VKLRDRHRHPECY---------VCTDCGTNLK 52 (79)
T ss_dssp CCCCSSSCCCCCS-SC--EECSSCEECTTTT---------SCSSSCCCHH
T ss_pred CCccccCCCCccC-cE--EEECcceeCcCcC---------eeCCCCCCCC
Confidence 4689999988774 33 3345788998884 3777766654
No 191
>1wfk_A Zinc finger, FYVE domain containing 19; riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Mus musculus} SCOP: g.50.1.1
Probab=20.34 E-value=57 Score=24.73 Aligned_cols=52 Identities=13% Similarity=0.302 Sum_probs=32.7
Q ss_pred CcccccccccccCCC-eeEEeCCCCcccHhHHHHHHh------cCCCCCcccccccccC
Q 017521 155 SRTCAICLEDYSVGE-KLRILPCRHKFHAFCVDSWLT------SWRTFCPVCKRDARTS 206 (370)
Q Consensus 155 ~~~C~ICLe~~~~~~-~v~~lpC~H~FH~~Ci~~Wl~------~~~~~CP~CR~~i~~~ 206 (370)
...|.+|...|..-. +--.-.||.+|+..|....+. .....|-.|-..+...
T Consensus 9 ~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~Cs~~~~~lp~~g~~~~RVC~~C~~~l~~~ 67 (88)
T 1wfk_A 9 ESRCYGCAVKFTLFKKEYGCKNCGRAFCNGCLSFSALVPRAGNTQQKVCKQCHTILTRG 67 (88)
T ss_dssp CSBCTTTCCBCCSSSCEEECSSSCCEEETTTSCEEEEETTTTSEEEEECHHHHHHHHHC
T ss_pred CCCCcCcCCcccCccccccCCCCCCEEChhHcCCceeccccCCCcCEECHHHHHHHHhc
Confidence 468999999987542 111224899999999765321 1112388886665543
No 192
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=20.24 E-value=94 Score=22.57 Aligned_cols=8 Identities=13% Similarity=0.289 Sum_probs=3.0
Q ss_pred HHHhhhhh
Q 017521 103 AVLATCFF 110 (370)
Q Consensus 103 ~vL~~~~~ 110 (370)
++..+|+|
T Consensus 22 l~~glcI~ 29 (70)
T 2klu_A 22 LFIGLGIF 29 (70)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 33333333
Done!