Query 017527
Match_columns 370
No_of_seqs 173 out of 1242
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 15:52:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017527.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017527hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1zc6_A Probable N-acetylglucos 100.0 7.6E-42 2.6E-46 328.2 31.4 261 22-311 11-274 (305)
2 2ch5_A NAGK protein; transfera 100.0 3.1E-41 1.1E-45 328.6 32.6 304 20-350 4-323 (347)
3 1zbs_A Hypothetical protein PG 100.0 9E-41 3.1E-45 318.9 24.7 276 23-349 1-278 (291)
4 2e2o_A Hexokinase; acetate and 100.0 9E-40 3.1E-44 312.4 30.7 284 23-352 3-288 (299)
5 1zxo_A Conserved hypothetical 100.0 1.5E-41 5.1E-46 324.4 10.6 274 23-349 1-276 (291)
6 2qm1_A Glucokinase; alpha-beta 100.0 1.2E-38 4E-43 307.6 16.0 292 19-349 3-319 (326)
7 3vgl_A Glucokinase; ROK family 100.0 8.8E-38 3E-42 302.2 13.9 289 22-355 2-316 (321)
8 3r8e_A Hypothetical sugar kina 100.0 1.1E-36 3.7E-41 294.6 13.4 275 21-349 18-317 (321)
9 4db3_A Glcnac kinase, N-acetyl 100.0 4.4E-36 1.5E-40 291.1 16.7 278 23-350 25-325 (327)
10 2hoe_A N-acetylglucosamine kin 100.0 7E-36 2.4E-40 295.3 13.8 265 21-351 86-371 (380)
11 4htl_A Beta-glucoside kinase; 100.0 1.9E-35 6.4E-40 283.0 16.1 261 23-351 5-291 (297)
12 2yhw_A Bifunctional UDP-N-acet 100.0 7.4E-36 2.5E-40 290.9 11.9 284 21-350 29-337 (343)
13 3vov_A Glucokinase, hexokinase 100.0 3.1E-35 1.1E-39 282.2 15.6 270 23-353 2-297 (302)
14 1z05_A Transcriptional regulat 100.0 1.3E-34 4.4E-39 290.7 19.3 286 21-351 107-415 (429)
15 2aa4_A Mannac kinase, putative 100.0 3.7E-35 1.3E-39 278.9 13.1 261 23-349 2-286 (289)
16 3htv_A D-allose kinase, alloki 100.0 3.1E-34 1.1E-38 276.4 17.5 272 21-355 6-303 (310)
17 1z6r_A MLC protein; transcript 100.0 8.6E-35 3E-39 289.6 13.8 281 21-347 84-389 (406)
18 2ap1_A Putative regulator prot 100.0 2.1E-34 7.1E-39 278.7 15.5 278 22-349 24-324 (327)
19 2gup_A ROK family protein; sug 100.0 4.4E-34 1.5E-38 272.0 15.3 261 23-351 5-287 (292)
20 3epq_A Putative fructokinase; 100.0 1.2E-32 4.1E-37 264.5 12.6 260 22-353 3-291 (302)
21 3mcp_A Glucokinase; structural 100.0 8.6E-32 2.9E-36 264.8 16.3 236 21-318 8-288 (366)
22 2q2r_A Glucokinase 1, putative 100.0 4.5E-32 1.5E-36 267.3 10.3 286 21-349 28-369 (373)
23 1sz2_A Glucokinase, glucose ki 100.0 7E-31 2.4E-35 254.9 18.5 279 21-350 13-325 (332)
24 1saz_A Probable butyrate kinas 100.0 2.4E-29 8.3E-34 248.8 13.9 270 22-349 2-346 (381)
25 1woq_A Inorganic polyphosphate 99.9 1.8E-28 6.3E-33 230.8 9.6 228 22-350 12-260 (267)
26 3lm2_A Putative kinase; struct 99.9 7.9E-27 2.7E-31 214.9 10.3 195 18-315 2-209 (226)
27 2yhx_A Hexokinase B; transfera 99.9 2.8E-23 9.6E-28 209.2 20.3 293 21-349 60-440 (457)
28 1bdg_A Hexokinase; phosphotran 99.9 4.1E-23 1.4E-27 208.0 19.5 289 21-349 67-444 (451)
29 1cza_N Hexokinase type I; stru 99.9 3.2E-23 1.1E-27 225.0 19.2 291 21-349 77-457 (917)
30 1cza_N Hexokinase type I; stru 99.8 1.3E-20 4.3E-25 204.7 16.0 300 21-349 525-905 (917)
31 3o8m_A Hexokinase; rnaseh-like 99.7 7.3E-16 2.5E-20 155.7 19.7 292 21-349 79-467 (485)
32 3hm8_A Hexokinase-3; glucose, 99.4 3.9E-11 1.3E-15 119.6 22.4 295 21-349 58-434 (445)
33 3f9m_A Glucokinase; hexokinase 99.3 6.2E-11 2.1E-15 119.1 21.1 295 21-349 76-458 (470)
34 1hux_A Activator of (R)-2-hydr 98.8 1.3E-06 4.5E-11 81.7 22.1 225 22-314 3-233 (270)
35 4ehu_A Activator of 2-hydroxyi 98.6 1.1E-05 3.7E-10 75.2 22.8 113 23-168 2-116 (276)
36 4ijn_A Acetate kinase, acetoki 98.4 4.6E-05 1.6E-09 74.5 23.3 249 22-313 23-348 (398)
37 3ifr_A Carbohydrate kinase, FG 98.4 6.8E-07 2.3E-11 91.1 9.3 78 18-104 3-86 (508)
38 3g25_A Glycerol kinase; IDP007 98.4 1.1E-06 3.9E-11 89.2 10.8 78 18-104 2-85 (501)
39 4e1j_A Glycerol kinase; struct 98.3 2E-06 6.8E-11 87.9 10.7 76 20-104 24-105 (520)
40 3djc_A Type III pantothenate k 98.3 2.2E-05 7.4E-10 73.4 16.4 127 23-170 3-149 (266)
41 3bex_A Type III pantothenate k 98.3 9.5E-06 3.3E-10 75.1 13.9 126 21-170 2-145 (249)
42 2zf5_O Glycerol kinase; hypert 98.3 2.6E-06 8.8E-11 86.4 10.6 76 20-104 1-82 (497)
43 3h3n_X Glycerol kinase; ATP-bi 98.3 3.3E-06 1.1E-10 85.9 11.0 75 21-104 4-84 (506)
44 2w40_A Glycerol kinase, putati 98.3 2.4E-06 8.2E-11 86.8 9.6 75 21-104 3-85 (503)
45 2p3r_A Glycerol kinase; glycer 98.2 4E-06 1.4E-10 85.4 10.8 74 22-104 3-82 (510)
46 2dpn_A Glycerol kinase; thermu 98.2 3.7E-06 1.3E-10 85.3 9.7 74 22-104 2-81 (495)
47 3h1q_A Ethanolamine utilizatio 98.2 0.00055 1.9E-08 63.1 23.4 134 21-170 27-163 (272)
48 2d4w_A Glycerol kinase; alpha 98.2 6.3E-06 2.2E-10 83.7 10.7 74 22-104 2-81 (504)
49 3hz6_A Xylulokinase; xylulose, 98.1 7.5E-06 2.6E-10 83.4 10.6 76 20-105 3-84 (511)
50 3l0q_A Xylulose kinase; xlylul 98.1 1.1E-05 3.7E-10 83.0 10.0 73 21-102 4-82 (554)
51 3ezw_A Glycerol kinase; glycer 98.0 2.5E-05 8.5E-10 79.8 10.5 75 21-104 3-83 (526)
52 3r9p_A ACKA; ssgcid, seattle s 97.9 0.0038 1.3E-07 60.8 24.7 247 23-312 13-338 (391)
53 2itm_A Xylulose kinase, xylulo 97.9 2.2E-05 7.4E-10 79.3 9.3 71 23-104 1-77 (484)
54 3jvp_A Ribulokinase; PSI-II, N 97.8 4.4E-05 1.5E-09 78.8 9.2 76 21-104 4-96 (572)
55 3ll3_A Gluconate kinase; xylul 97.8 6.4E-05 2.2E-09 76.4 10.2 72 22-105 4-81 (504)
56 3h6e_A Carbohydrate kinase, FG 97.7 5.6E-05 1.9E-09 76.4 8.0 71 19-104 3-78 (482)
57 2h3g_X Biosynthetic protein; p 97.7 0.0012 4.2E-08 61.5 16.2 127 23-170 1-147 (268)
58 3i8b_A Xylulose kinase; strain 97.7 0.00012 4E-09 74.7 10.0 71 20-104 3-74 (515)
59 2ivn_A O-sialoglycoprotein end 97.6 0.043 1.5E-06 52.3 26.3 120 23-154 2-130 (330)
60 2uyt_A Rhamnulokinase; rhamnos 97.5 0.00012 4.3E-09 73.7 6.7 73 22-107 4-90 (489)
61 2e1z_A Propionate kinase; TDCD 97.2 0.1 3.6E-06 51.2 23.0 65 240-313 291-355 (415)
62 4bc3_A Xylulose kinase; transf 97.1 0.00072 2.5E-08 69.1 7.3 73 21-103 9-99 (538)
63 4a2a_A Cell division protein F 96.9 0.15 5.1E-06 50.3 22.1 76 21-105 7-86 (419)
64 3eno_A Putative O-sialoglycopr 96.7 0.49 1.7E-05 45.1 24.7 135 23-170 7-151 (334)
65 2ews_A Pantothenate kinase; PA 96.7 0.072 2.5E-06 49.9 16.5 106 22-170 20-133 (287)
66 3en9_A Glycoprotease, O-sialog 96.5 0.89 3E-05 46.0 28.4 102 22-136 6-114 (540)
67 3i33_A Heat shock-related 70 k 96.4 0.71 2.4E-05 44.5 26.3 90 69-163 134-231 (404)
68 2ych_A Competence protein PILM 96.2 0.39 1.3E-05 45.9 19.5 130 22-170 13-215 (377)
69 3qfu_A 78 kDa glucose-regulate 96.0 1.2 4E-05 42.6 27.6 90 69-163 129-223 (394)
70 4gni_A Putative heat shock pro 95.8 1.5 5E-05 42.4 27.8 67 94-162 149-221 (409)
71 2iir_A Acetate kinase; transfe 95.8 0.042 1.4E-06 53.8 10.1 65 240-313 283-347 (403)
72 1g99_A Acetate kinase; alpha/b 95.6 0.035 1.2E-06 54.5 8.7 138 146-313 202-347 (408)
73 3khy_A Propionate kinase; csgi 95.4 0.098 3.4E-06 50.8 11.2 65 240-313 274-338 (384)
74 1nu0_A Hypothetical protein YQ 95.4 0.037 1.3E-06 46.2 7.2 89 20-133 1-96 (138)
75 2f9w_A Pantothenate kinase; CO 95.3 0.46 1.6E-05 44.0 14.9 121 20-170 21-162 (271)
76 4h0o_A Acetate kinase; askha ( 95.2 0.11 3.8E-06 50.7 10.8 65 240-313 284-351 (404)
77 1vhx_A Putative holliday junct 94.8 0.076 2.6E-06 44.9 7.3 93 23-138 4-103 (150)
78 1jce_A ROD shape-determining p 94.6 3 0.0001 39.0 25.0 72 96-169 96-170 (344)
79 2fxu_A Alpha-actin-1, actin, a 94.4 0.52 1.8E-05 45.3 13.3 92 75-170 80-172 (375)
80 1k8k_A ARP3, actin-like protei 94.1 0.6 2E-05 45.4 13.1 91 76-169 88-186 (418)
81 3cet_A Conserved archaeal prot 93.8 0.13 4.3E-06 49.2 7.4 81 23-128 1-87 (334)
82 1iv0_A Hypothetical protein; r 93.7 0.24 8E-06 38.8 7.6 83 24-132 3-92 (98)
83 1yuw_A Heat shock cognate 71 k 93.0 8.5 0.00029 38.9 26.8 95 69-168 115-217 (554)
84 3r6m_A YEAZ, resuscitation pro 92.9 2.8 9.7E-05 37.2 14.4 96 23-139 3-101 (213)
85 1t6c_A Exopolyphosphatase; alp 92.7 0.81 2.8E-05 43.2 11.2 131 23-168 13-160 (315)
86 2a6a_A Hypothetical protein TM 92.3 1.6 5.6E-05 38.9 12.0 97 22-139 12-111 (218)
87 4b9q_A Chaperone protein DNAK; 91.8 13 0.00043 38.1 26.0 90 69-163 111-205 (605)
88 3bzc_A TEX; helix-turn-helix, 91.3 2.2 7.5E-05 45.3 13.5 98 21-139 328-427 (785)
89 2gel_A Putative GRAM negative 91.2 5.2 0.00018 35.8 14.2 96 23-139 2-100 (231)
90 3zyy_X Iron-sulfur cluster bin 91.2 0.57 1.9E-05 48.5 8.7 71 21-101 205-296 (631)
91 1dkg_D Molecular chaperone DNA 91.1 10 0.00036 35.8 22.9 91 69-164 111-206 (383)
92 3mdq_A Exopolyphosphatase; str 91.0 2 6.7E-05 40.5 11.7 137 20-169 2-154 (315)
93 3sk3_A Acetate kinase, acetoki 90.4 0.18 6.1E-06 49.6 3.8 138 146-313 219-364 (415)
94 2v7y_A Chaperone protein DNAK; 87.7 7.7 0.00026 38.7 13.9 90 69-163 85-178 (509)
95 3psf_A Transcription elongatio 86.6 2.7 9.2E-05 45.9 10.2 101 22-140 519-629 (1030)
96 3d2f_A Heat shock protein homo 86.2 34 0.0012 35.4 24.9 95 69-168 114-221 (675)
97 3hi0_A Putative exopolyphospha 85.5 8.4 0.00029 38.6 12.7 135 21-168 14-162 (508)
98 3psi_A Transcription elongatio 85.5 3.2 0.00011 46.1 10.3 101 22-140 516-626 (1219)
99 2kho_A Heat shock protein 70; 85.0 5.8 0.0002 40.7 11.5 90 69-163 111-205 (605)
100 3t69_A Putative 2-dehydro-3-de 84.0 1.4 4.6E-05 42.0 5.7 34 19-61 4-37 (330)
101 1nbw_A Glycerol dehydratase re 83.9 2 6.9E-05 43.7 7.2 62 22-91 2-63 (607)
102 1u6z_A Exopolyphosphatase; alp 82.8 14 0.00047 37.1 13.0 136 22-168 11-159 (513)
103 3cer_A Possible exopolyphospha 82.2 13 0.00044 35.3 11.9 134 22-165 16-165 (343)
104 2d0o_A DIOL dehydratase-reacti 78.7 4.9 0.00017 40.9 7.8 68 22-96 2-69 (610)
105 4h0p_A Acetate kinase; askha ( 76.7 1.8 6.3E-05 42.5 4.0 70 240-313 301-377 (438)
106 4fo0_A Actin-related protein 8 76.4 22 0.00075 35.8 12.2 96 70-169 170-269 (593)
107 1k8k_B ARP2, actin-like protei 74.3 1.1 3.9E-05 43.3 1.8 69 98-170 107-176 (394)
108 4ep4_A Crossover junction endo 73.0 18 0.00062 30.7 8.9 57 23-90 2-64 (166)
109 3nuw_A 2-OXO-3-deoxygalactonat 71.6 4.1 0.00014 38.0 4.9 33 19-61 3-35 (295)
110 3qb0_A Actin-related protein 4 69.4 39 0.0013 33.8 11.8 93 74-169 92-185 (498)
111 1hjr_A Holliday junction resol 69.4 9.5 0.00032 32.1 6.3 56 23-90 2-60 (158)
112 4am6_A Actin-like protein ARP8 69.2 34 0.0012 35.4 11.4 98 69-169 191-293 (655)
113 3dwl_A Actin-related protein 3 69.0 35 0.0012 33.2 11.2 92 75-169 103-202 (427)
114 3aap_A Ectonucleoside triphosp 50.9 1.5E+02 0.0051 27.9 11.8 126 22-162 3-156 (353)
115 2i7n_A Pantothenate kinase 1; 49.8 1.7E+02 0.0057 27.9 11.8 52 253-314 280-331 (360)
116 1xho_A Chorismate mutase; sout 41.3 64 0.0022 26.7 6.4 35 69-103 45-79 (148)
117 2ych_A Competence protein PILM 39.0 1E+02 0.0035 28.6 8.6 20 22-41 191-210 (377)
118 1dbf_A Protein (chorismate mut 38.9 81 0.0028 25.5 6.5 35 69-103 16-50 (127)
119 1ufy_A Chorismate mutase; shik 35.0 1E+02 0.0034 24.7 6.4 35 69-103 15-50 (122)
120 3vth_A Hydrogenase maturation 28.7 1.2E+02 0.0041 31.9 7.6 51 254-315 669-719 (761)
121 2zgy_A Plasmid segregation pro 22.3 63 0.0022 29.6 3.7 84 84-168 85-186 (320)
No 1
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=100.00 E-value=7.6e-42 Score=328.18 Aligned_cols=261 Identities=25% Similarity=0.345 Sum_probs=220.2
Q ss_pred cEEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEEEEecCCCccccCHHHHHHHHHHHHHHHHHHcCCCccCc--ceEE
Q 017527 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAV--RAVC 99 (370)
Q Consensus 22 ~~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~~~~~~~n~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~v--~~Ig 99 (370)
.|+||||+|||+++++++|. +|+++.+.+.++.+.. .+++++++.+.+++++++++.+.+++++ .+||
T Consensus 11 ~~~lGiDiGgT~i~~~l~d~---------~G~il~~~~~~~~~~~-~~~~~~~~~l~~~i~~~l~~~~~~~~~i~~~~ig 80 (305)
T 1zc6_A 11 RYLIGVDGGGTGTRIRLHAS---------DGTPLAMAEGGASALS-QGIAKSWQAVLSTLEAAFQQAGLPAAPASACAIG 80 (305)
T ss_dssp CEEEEEEECSSCEEEEEEET---------TCCEEEEEEESCCCGG-GCHHHHHHHHHHHHHHHHHHTTCCCCCGGGEEEE
T ss_pred CEEEEEEcCccceEEEEEcC---------CCCEEEEEeCCCCCcc-cCHHHHHHHHHHHHHHHHHhcCCChhhhccceEE
Confidence 49999999999999999998 7999998876554443 4789999999999999999888777776 7999
Q ss_pred EeecCCCChhhHHHHHHHHHhhCC-CCceEEEeChHHHHHHhhcCCCCCeEEEEEcccceeeeeccCCceEeeCCCCCCc
Q 017527 100 LAVSGVNHPTDQQRILNWLRDIFP-GNVRLYVHNDALAALASGTMGKLHGCVLIAGTGTIAYGFTEDGRDARAAGAGPIL 178 (370)
Q Consensus 100 IgvpG~~~~~~~~~l~~~L~~~f~-~~~pV~V~NDa~aa~~g~~~g~~~~v~l~~GTGi~g~gii~dG~l~~aGg~G~ll 178 (370)
||+||++++..+.. |++.|+ . .||+|+||+|+|++++. +..+++++++|||++|++++.||++.++|||||++
T Consensus 81 ig~pG~v~~~~~~~----l~~~~~~~-~pv~v~NDa~aaa~ge~-~~~~~v~v~~GTGigg~~i~~~G~~~~aGe~Gh~~ 154 (305)
T 1zc6_A 81 LGLSGVHNRQWAGE----FESQAPGF-ARLSLATDGYTTLLGAH-GGQPGIIVALGTGSIGEALYPDGSHREAGGWGYPS 154 (305)
T ss_dssp EEESCCCTTSHHHH----HHHTCCCC-SEEEEECHHHHHHHHHT-TTSSEEEEEESSSEEEEEECTTSCEEEESCCCTTT
T ss_pred EEecCCCchHHHHH----HHHhCCCC-ceEEEECCHHHHHHhhc-CCCCeEEEEecCCeEEEEEeCCCcEEEecCccccc
Confidence 99999988766543 666773 2 89999999999999874 45799999999999777776699999999999999
Q ss_pred CCCCchHHHHHHHHHHHHHHHcCCCCCchhHHHHHHHcCCCChhhHHHHhccCCChHHHhhhHHHHHHHHhcCCHHHHHH
Q 017527 179 GDWGSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDPSWARIAALVPVVVSCAEAGDEVANKI 258 (370)
Q Consensus 179 gd~Gs~~~iG~~~~~~~~~~~dg~~~~~~l~~~~~~~~~~~s~~~l~~~~~~~~~~~~~a~~~~~v~~~A~~GD~~A~~i 258 (370)
+|+|+++||||++|.+.+++.||+.+.|++.++++++++ .+.+.++.+.+.. ...+++.+++.|+++| +||+.|+++
T Consensus 155 ~d~g~~~~iG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~-~~~~~~~~~~~v~~~a-~GD~~A~~i 231 (305)
T 1zc6_A 155 GDEASGAWLGQRAAQLTQMALDGRHSHSPLTRAVLDFVG-GDWQAMMAWNGRA-TPAQFARLAPLVLSAA-RVDPEADAL 231 (305)
T ss_dssp SCTTSHHHHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHT-SSHHHHHHHHHTC-CHHHHHTTHHHHHHHT-TTCHHHHHH
T ss_pred CCCchHHHHHHHHHHHHHHHHhCCCCCChHHHHHHHHHC-cCHHHHHHHHhcc-CHHHHHHHHHHHHHHc-CCCHHHHHH
Confidence 999999999999999998889999989999999888886 4667777765532 2234445678999999 999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHH
Q 017527 259 LQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVK 311 (370)
Q Consensus 259 l~~a~~~Lg~~l~~vv~~l~~~~~~~~~P~~VVlgGgv~~~~~~~~l~~~v~~ 311 (370)
+++++++|+.+++++++. | |+.||||||++.....+ |.+.+++
T Consensus 232 ~~~~~~~L~~~l~~l~~~-~--------p~~VvlgGgv~~~~~~~-l~~~l~~ 274 (305)
T 1zc6_A 232 LRQAGEDAWAIARALDPQ-D--------ELPVALCGGLGQALRDW-LPPGFRQ 274 (305)
T ss_dssp HHHHHHHHHHHHHHHCTT-C--------CSCEEEESHHHHHTGGG-SCHHHHH
T ss_pred HHHHHHHHHHHHHHHhcC-C--------CCeEEEECCchHhHHHH-HHHHHHh
Confidence 999999999999999987 8 79999999998754333 3666655
No 2
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=100.00 E-value=3.1e-41 Score=328.55 Aligned_cols=304 Identities=23% Similarity=0.311 Sum_probs=250.9
Q ss_pred CCcEEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEEEEecCCCccccCHHHHHHHHHHHHHHHHHHcCCCcc-CcceE
Q 017527 20 GREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRS-AVRAV 98 (370)
Q Consensus 20 ~~~~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~~~~~~~n~~~~~~~~~~~~l~~~i~~~l~~~~~~~~-~v~~I 98 (370)
|..|+||||+|||+++++++|. +|+++.+.+.++.+....+++++++.|.+++++++++.+.++. ++.+|
T Consensus 4 M~~~~lgiDiGgt~~~~~l~d~---------~g~i~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~i~gi 74 (347)
T 2ch5_A 4 MAAIYGGVEGGGTRSEVLLVSE---------DGKILAEADGLSTNHWLIGTDKCVERINEMVNRAKRKAGVDPLVPLRSL 74 (347)
T ss_dssp SSCEEEEEEECTTCEEEEEEET---------TSCEEEEEEECCCCHHHHCHHHHHHHHHHHHHHHHHHHTCCTTCCBSEE
T ss_pred cceEEEEEEcCccceEEEEEeC---------CCCEEEEEeCCCCCcccCCHHHHHHHHHHHHHHHHHhcCCCcccceeEE
Confidence 4459999999999999999999 8999998887554432136899999999999999998877666 79999
Q ss_pred EEeecCCCChhhHHHHHHHHHhhCCC-CceEEEeChHHHHHHhhcCCCCCeEEEEEcccceeeeeccCCceEeeCCCCCC
Q 017527 99 CLAVSGVNHPTDQQRILNWLRDIFPG-NVRLYVHNDALAALASGTMGKLHGCVLIAGTGTIAYGFTEDGRDARAAGAGPI 177 (370)
Q Consensus 99 gIgvpG~~~~~~~~~l~~~L~~~f~~-~~pV~V~NDa~aa~~g~~~g~~~~v~l~~GTGi~g~gii~dG~l~~aGg~G~l 177 (370)
|||+||++++..+.+|++.|++.|+. ..||+|+||+++++++. ++ .+++++++|||++++.+..+|+.+++|+|||+
T Consensus 75 gi~~pG~vd~~~~~~l~~~l~~~~~~~~~pv~v~NDa~aaa~a~-~~-~~~v~v~~GTGig~~~v~~~G~~c~cG~~G~l 152 (347)
T 2ch5_A 75 GLSLSGGDQEDAGRILIEELRDRFPYLSESYLITTDAAGSIATA-TP-DGGVVLISGTGSNCRLINPDGSESGCGGWGHM 152 (347)
T ss_dssp EEEETTTTCHHHHHHHHHHHHHHCTTSBSCEEEEEHHHHHHHHH-CS-SCEEEEEESSSEEEEEECTTSCEEEEECCCTT
T ss_pred EEeccCCCchHHHHHHHHHHHHhcCCCCceEEEECcHHHHHHhh-CC-CCcEEEEEcCCceeEEEcCCCCEEecCCcCcc
Confidence 99999999988788999999999951 17999999999999884 54 68999999999977656569999999999999
Q ss_pred cCCCCchHHHHHHHHHHHHHHHcCCCCC----chhHHHHHHHcCCCChhhHHHHhccCCChHHHhhhHHHHHHHHhcCCH
Q 017527 178 LGDWGSGYGIAAQALTAVIRAYDGRGPD----TMLTSNILSTLELSSPDELIGWTYVDPSWARIAALVPVVVSCAEAGDE 253 (370)
Q Consensus 178 lgd~Gs~~~iG~~~~~~~~~~~dg~~~~----~~l~~~~~~~~~~~s~~~l~~~~~~~~~~~~~a~~~~~v~~~A~~GD~ 253 (370)
.+|++|+++++++++....+..|++.+. +++.+.+.+.+++.+..+++.+.|......+++.+++.|+++|++||+
T Consensus 153 ~~de~s~~~i~~~~~~~~~~~~dg~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~gD~ 232 (347)
T 2ch5_A 153 MGDEGSAYWIAHQAVKIVFDSIDNLEAAPHDIGYVKQAMFHYFQVPDRLGILTHLYRDFDKCRFAGFCRKIAEGAQQGDP 232 (347)
T ss_dssp TCCTTSHHHHHHHHHHHHHHHHHTSSCCSSCCHHHHHHHHHHHTCSSHHHHHTTTTTTCCHHHHHTTHHHHHHHHHTTCH
T ss_pred cCCCccHHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHhCCCCHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCCH
Confidence 9999999999999998888888887753 467777777777666666666655332233444457899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCc--------cEEEEcCcccCcccccchHHHHHHHHhhC--CCceee
Q 017527 254 VANKILQDSVEELALSVKAVVQRLSLSGEDGKHSF--------PLVMVGGVLEANRRWDIGREVVKCILRDY--PGAVPI 323 (370)
Q Consensus 254 ~A~~il~~a~~~Lg~~l~~vv~~l~~~~~~~~~P~--------~VVlgGgv~~~~~~~~l~~~v~~~l~~~~--p~~~~~ 323 (370)
.|++++++++++|+.++.++++.+| |+ .||||||++...+.| .+.+++.++++. |...
T Consensus 233 ~a~~il~~~~~~La~~i~~l~~~~~--------p~~~~~~~~~~IvlgGgv~~~~~~~--~~~~~~~l~~~~~~~~~~-- 300 (347)
T 2ch5_A 233 LSRYIFRKAGEMLGRHIVAVLPEID--------PVLFQGKIGLPILCVGSVWKSWELL--KEGFLLALTQGREIQAQN-- 300 (347)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGSC--------GGGGCSTTCEEEEEESGGGGGHHHH--HHHHHHHHHHHC---CCC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc--------ccccccCCCceEEEECCcccCcHHH--HHHHHHHHHhhccccccc--
Confidence 9999999999999999999999999 67 999999999887665 899999999875 3221
Q ss_pred CCCCCcccccccccccccccccceeEe
Q 017527 324 RPKVCIWPHWHSCDQASANCCGAALCR 350 (370)
Q Consensus 324 ~p~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (370)
....+..+..++++++|||.++.
T Consensus 301 ----~~~~i~~~~~~~a~~~GAa~la~ 323 (347)
T 2ch5_A 301 ----FFSSFTLMKLRHSSALGGASLGA 323 (347)
T ss_dssp ----SCSEEEEEEESSCTHHHHHHHHH
T ss_pred ----cCCceEEEecCCChHHHHHHHHH
Confidence 12345666666678899999874
No 3
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=100.00 E-value=9e-41 Score=318.92 Aligned_cols=276 Identities=21% Similarity=0.221 Sum_probs=221.7
Q ss_pred EEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEEEEecCCCccccCHHHHHHHHHHHHHHHHHHcCCCccCcceEEEee
Q 017527 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAV 102 (370)
Q Consensus 23 ~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~~~~~~~n~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~v~~IgIgv 102 (370)
++||||+|||||+++++|. |+++.+.+.+++|+...++++++++|.+++++++ +.+..++.+||||+
T Consensus 1 ~~lgiDiGGT~~~~~l~d~----------g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~---~~~~~~i~~igig~ 67 (291)
T 1zbs_A 1 MILIGDSGSTKTDWCIAKE----------GKSLGRFQTSGINPFQQDRNEIDTALRSEVLPAI---GQKASSIRAVYFYG 67 (291)
T ss_dssp CEEEEEECSSEEEEEEEET----------TEEEEEEEEECCCTTTSCHHHHHHHHTTTTHHHH---TTSTTTCCEEEEEE
T ss_pred CEEEEEeCccceEEEEEeC----------CeEEEEEECCCCCcccCCHHHHHHHHHHHHHHHh---CCCcccccEEEEEC
Confidence 4799999999999999984 8999988776655532478999999999888764 22345689999999
Q ss_pred cCCCChhhHHHHHHHHHhhCCCCceEEEeChHHHHHHhhcCCCCCeEEEEEcccceeeeeccCCceEeeCCCCCCcCCCC
Q 017527 103 SGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGTMGKLHGCVLIAGTGTIAYGFTEDGRDARAAGAGPILGDWG 182 (370)
Q Consensus 103 pG~~~~~~~~~l~~~L~~~f~~~~pV~V~NDa~aa~~g~~~g~~~~v~l~~GTGi~g~gii~dG~l~~aGg~G~llgd~G 182 (370)
||++ +....++++.|+++|+...||+|+||+|+|++++. +.++++++++|||++|++++.||++.++|||||+++|+|
T Consensus 68 pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aa~ge~-g~~~~v~v~~GTGigg~~i~~~G~~~~aGe~G~~~~d~g 145 (291)
T 1zbs_A 68 AGCT-PAKAPMLNEALDSMLPHCDRIEVAGDMLGAARALC-GDSEGIACILGTGSNSCLFDGREIKANVSPLGYILGDEG 145 (291)
T ss_dssp TTCC-TTTHHHHHHHHHHHSTTCSEEEEECHHHHHHHHHT-TTSCEEEEEESSSEEEEEECSSSEEEECCCCHHHHCCTT
T ss_pred CCCC-hHHHHHHHHHHHHhcCCCCcEEEeCcHHHHHHhhc-CCCCcEEEEecCChheEEECCCCcEEEeCCCccccCCCc
Confidence 9998 66667999999999971139999999999999874 678999999999997778888999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHcCCCCCchhHHHHHHHcCCCChhhHHHHhccCCC-hHHHhhhHHHHHHHHhcCCHHHHHHHHH
Q 017527 183 SGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDPS-WARIAALVPVVVSCAEAGDEVANKILQD 261 (370)
Q Consensus 183 s~~~iG~~~~~~~~~~~dg~~~~~~l~~~~~~~~~~~s~~~l~~~~~~~~~-~~~~a~~~~~v~~~A~~GD~~A~~il~~ 261 (370)
+++|||++++...+.+ +. .+++.+.+.+.++.. .++++.+.|.... +.+++.+++.|++ ++||+.|++++++
T Consensus 146 ~~~~~G~~~~~~~~~~---~~-~~~l~~~~~~~~~~~-~~~l~~~~~~~~~~~~~ia~~a~~v~~--~~GD~~A~~i~~~ 218 (291)
T 1zbs_A 146 SGAVLGRLFIGSLLKG---QM-PEGLCEAFLQEYGLT-SADIIESVYRKPFPNRFLAGFSPFIAQ--HLDIPAVYSLVQN 218 (291)
T ss_dssp SHHHHHHHHHHHHHTT---CS-CTTHHHHHHHHTTCC-HHHHHHHHHHSSCHHHHHHTTHHHHHT--TTTSHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHc---cC-CChHHHHHHHHhCcC-HHHHHHHHHcCCCCHHHHHHhhHHHHH--hCCCHHHHHHHHH
Confidence 9999999998765543 23 678888888888743 5566666553322 2455667788888 8999999999999
Q ss_pred HHHHHHHHHHHHHHHh-ccCCCCCCCCccEEEEcCcccCcccccchHHHHHHHHhhCCCceeeCCCCCcccccccccccc
Q 017527 262 SVEELALSVKAVVQRL-SLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIRPKVCIWPHWHSCDQAS 340 (370)
Q Consensus 262 a~~~Lg~~l~~vv~~l-~~~~~~~~~P~~VVlgGgv~~~~~~~~l~~~v~~~l~~~~p~~~~~~p~~~~~~~~~~~~~~~ 340 (370)
++++|+..+ .++.+ | |+.||+|||++.+ | .+.+++.++++.+... . ..++
T Consensus 219 ~~~~La~~i--~~~~~~~--------p~~vvlgGGv~~~---~--~~~l~~~l~~~~~~i~--~------------~~~a 269 (291)
T 1zbs_A 219 SFDDFLVRN--VLRYNRP--------DLPLHFIGSVAFH---Y--REVLSSVIKKRGLTLG--S------------VLQS 269 (291)
T ss_dssp HHHHHHHHH--TGGGCCT--------TSCEEEESHHHHH---T--HHHHHHHHHHTTCCEE--E------------EESC
T ss_pred HHHHHHHHH--hcccCCC--------CceEEEECchHHh---h--HHHHHHHHHHcCCeec--c------------cCcC
Confidence 999999999 45555 6 8999999999875 4 7888899988654322 1 1145
Q ss_pred cccccceeE
Q 017527 341 ANCCGAALC 349 (370)
Q Consensus 341 ~~~~~~~~~ 349 (370)
++.||+.|+
T Consensus 270 ~~~GA~~la 278 (291)
T 1zbs_A 270 PMEGLIQYH 278 (291)
T ss_dssp SHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 688888877
No 4
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=100.00 E-value=9e-40 Score=312.38 Aligned_cols=284 Identities=24% Similarity=0.365 Sum_probs=236.9
Q ss_pred EEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEEEEecCCCccccCHHHHHHHHHHHHHHHHHHcCCCccCcceEEEee
Q 017527 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAV 102 (370)
Q Consensus 23 ~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~~~~~~~n~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~v~~IgIgv 102 (370)
|+||||+|+|+++++++|. +|+++.+.+.++++....+++++++.+.+.+++++++. +.+||||+
T Consensus 3 ~~lgiDiGgt~~~~~l~d~---------~g~i~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~------~~~igi~~ 67 (299)
T 2e2o_A 3 IIVGVDAGGTKTKAVAYDC---------EGNFIGEGSSGPGNYHNVGLTRAIENIKEAVKIAAKGE------ADVVGMGV 67 (299)
T ss_dssp CEEEEEECSSCEEEEEECT---------TSCEEEEEEESCCCHHHHCHHHHHHHHHHHHHHHHTSC------CSEEEEEE
T ss_pred EEEEEEeCCCcEEEEEEcC---------CCCEEEEEeCCCCCcccCCHHHHHHHHHHHHHHHHhcC------CCEEEEEc
Confidence 8999999999999999999 89999998887765312368999999999999987532 67999999
Q ss_pred cCCCChh-hHHHHHHHHHhhCCCCceEEEeChHHHHHHhhcCCCCCeEEEEEcccceeeeeccCCceEeeCCCCCCcCCC
Q 017527 103 SGVNHPT-DQQRILNWLRDIFPGNVRLYVHNDALAALASGTMGKLHGCVLIAGTGTIAYGFTEDGRDARAAGAGPILGDW 181 (370)
Q Consensus 103 pG~~~~~-~~~~l~~~L~~~f~~~~pV~V~NDa~aa~~g~~~g~~~~v~l~~GTGi~g~gii~dG~l~~aGg~G~llgd~ 181 (370)
||+ ++. ...+|.+.|++ |+ .||+++||++++++++.. .++++++++|||++..|. ..|...++|||||+++|+
T Consensus 68 ~G~-~~~~~~~~l~~~l~~-~~--~pv~v~ND~~aaa~~e~~-~~~~v~l~~GTG~i~~g~-~~G~~~~aGE~Gh~~~~~ 141 (299)
T 2e2o_A 68 AGL-DSKFDWENFTPLASL-IA--PKVIIQHDGVIALFAETL-GEPGVVVIAGTGSVVEGY-NGKEFLRVGGRGWLLSDD 141 (299)
T ss_dssp TTC-CSHHHHHHHHHHHTT-SS--SEEEEEEHHHHHHHHHHT-TSCEEEEEESSSEEEEEE-CSSCEEEEECSCTTTCCT
T ss_pred CCC-CchhHHHHHHHHHHh-CC--CCEEEeCcHHHHHhhccC-CCCeEEEEecCCEEEEEE-cCCeEEecCCcCCCcCCC
Confidence 999 543 34689999999 98 899999999999998865 478999999999767776 588889999999999999
Q ss_pred CchHHHHHHHHHHHHHHHcCCCCCchhHHHHHHHcCCCChhhHHHHhccC-CChHHHhhhHHHHHHHHhcCCHHHHHHHH
Q 017527 182 GSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVD-PSWARIAALVPVVVSCAEAGDEVANKILQ 260 (370)
Q Consensus 182 Gs~~~iG~~~~~~~~~~~dg~~~~~~l~~~~~~~~~~~s~~~l~~~~~~~-~~~~~~a~~~~~v~~~A~~GD~~A~~il~ 260 (370)
|++|+||+++++...++.|++.+.+.+.+.+.+.++..+...++.+.+.. ....+++.+++.|+++|++||+.|+++++
T Consensus 142 g~~c~cG~~gl~~~~~~le~~~s~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~~a~~gd~~a~~il~ 221 (299)
T 2e2o_A 142 GSAYWVGRKALRKVLKMMDGLENKTILYNKVLKTINVKDLDELVMWSYTSSCQIDLVASIAKAVDEAANEGDTVAMDILK 221 (299)
T ss_dssp TSHHHHHHHHHHHHHHHHTTSSCCCHHHHHHHHHTTCCSHHHHHHHHHHHTTCHHHHHTTHHHHHHHHHTTCHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHhCCCCHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhcCCHHHHHHHH
Confidence 99999999999988889999999999998888888765666666665421 11233345678999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHHHHHhhCCCceeeCCCCCcccccccccccc
Q 017527 261 DSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIRPKVCIWPHWHSCDQAS 340 (370)
Q Consensus 261 ~a~~~Lg~~l~~vv~~l~~~~~~~~~P~~VVlgGgv~~~~~~~~l~~~v~~~l~~~~p~~~~~~p~~~~~~~~~~~~~~~ 340 (370)
+++++|+..+.++++.+| |+.||||||++.. +.| ++.+++.++++ .+..+...++
T Consensus 222 ~~~~~La~~i~~l~~~l~--------p~~IvlgGgv~~~-~~~--~~~l~~~~~~~--------------~i~~~~~~~~ 276 (299)
T 2e2o_A 222 QGAELLASQAVYLARKIG--------TNKVYLKGGMFRS-NIY--HKFFTLYLEKE--------------GIISDLGKRS 276 (299)
T ss_dssp HHHHHHHHHHHHHHHHHT--------CSEEEEESGGGGS-HHH--HHHHHHHHHHT--------------TCEEECCSCC
T ss_pred HHHHHHHHHHHHHHHhcC--------CCEEEEECCccCc-HHH--HHHHHHHCCCC--------------eEeccCCCCC
Confidence 999999999999999999 7999999999988 665 89999998874 2333442236
Q ss_pred cccccceeEeee
Q 017527 341 ANCCGAALCRIQ 352 (370)
Q Consensus 341 ~~~~~~~~~~~~ 352 (370)
+++|||.+++.+
T Consensus 277 ~~~GAa~la~~~ 288 (299)
T 2e2o_A 277 PEIGAVILAYKE 288 (299)
T ss_dssp HHHHHHHHHHHH
T ss_pred hHHHHHHHHHHh
Confidence 689999988544
No 5
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=100.00 E-value=1.5e-41 Score=324.36 Aligned_cols=274 Identities=19% Similarity=0.221 Sum_probs=206.6
Q ss_pred EEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEEEEecCCCccccCHHHHHHHHHHHHHHHHHHcCCCccCcceEEEee
Q 017527 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAV 102 (370)
Q Consensus 23 ~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~~~~~~~n~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~v~~IgIgv 102 (370)
|+||||+||||++++++|. |+++.+.+.++.|+...++++++++|.+++++++. ..++.+||||+
T Consensus 1 ~~lgiDiGGT~i~~~l~d~----------g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~-----~~~i~~igig~ 65 (291)
T 1zxo_A 1 MILIADSGSTKTDWCVVLN----------GAVIKRLGTKGINPFFQSEEEIQQKLTASLLPQLP-----EGKFNAVYFYG 65 (291)
T ss_dssp ---CEECCTTCEEEEEECS----------SSEEEEEEECCCCTTTSCSTTTTTTTTC------------------CEEEC
T ss_pred CEEEEEeccccEEEEEEcC----------CeEEEEEECCCCCcccCCHHHHHHHHHHHHHHhcC-----cccccEEEEEc
Confidence 4799999999999999984 89999888777655333677888888888887653 24688999999
Q ss_pred cCCCChhhHHHHHHHHHhhCCCCceEEEeChHHHHHHhhcCCCCCeEEEEEcccceeeeeccCCceEeeCCCCCCcCCCC
Q 017527 103 SGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGTMGKLHGCVLIAGTGTIAYGFTEDGRDARAAGAGPILGDWG 182 (370)
Q Consensus 103 pG~~~~~~~~~l~~~L~~~f~~~~pV~V~NDa~aa~~g~~~g~~~~v~l~~GTGi~g~gii~dG~l~~aGg~G~llgd~G 182 (370)
||++ +....++++.|++.|+...||+|+||+|+|++++. +.++++++++|||++|+|++.||++.++|||||+++|+|
T Consensus 66 pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aalge~-g~~~~v~v~~GTGi~g~gi~~~G~~~~aGe~Gh~~~d~g 143 (291)
T 1zxo_A 66 AGCT-PEKAPVLRRAIADSLPVIGNIKANSDMLAAAHGLC-GQKAGIACILGTGSNSCFYNGKEIVSNISPLGFILGDEG 143 (291)
T ss_dssp TTCC-TTTTHHHHHHHHHHSCCCSCCEEECSHHHHHHHTT-TTSCBEEEEESSSEEEEEECSSSEEEECCCCCTTTSCCS
T ss_pred CCCC-HHHHHHHHHHHHHhcCCCceEEEECcHHHHHHhhc-CCCCcEEEEeCCChheEEECCCCcEEEeCCCccccCCCc
Confidence 9998 66567999999999971039999999999999885 678999999999997788999999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHcCCCCCchhHHHHHHHcCCCChhhHHHHhccCC-ChHHHhhhHHHHHHHHhcCCHHHHHHHHH
Q 017527 183 SGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDP-SWARIAALVPVVVSCAEAGDEVANKILQD 261 (370)
Q Consensus 183 s~~~iG~~~~~~~~~~~dg~~~~~~l~~~~~~~~~~~s~~~l~~~~~~~~-~~~~~a~~~~~v~~~A~~GD~~A~~il~~ 261 (370)
++||||++++...+.. +. .+++.+.+.+.++. +.++++.+.|... .+.+++.+++.|++ ++||+.|++++++
T Consensus 144 ~~~~~G~~~~~~~~~~---~~-~~~l~~~~~~~~~~-~~~~l~~~~~~~~~~~~~ia~~a~~v~~--~~GD~~A~~i~~~ 216 (291)
T 1zxo_A 144 SGAVLGKLLVGDILKN---QL-PATLKEEFLKQFDL-TPPEIIDRVYRQPFPNRFLASLSPFIAQ--HLEEPAIRQLVMN 216 (291)
T ss_dssp SHHHHHHHHHHHGGGT---CS-CSHHHHHHHHHHTC-CHHHHGGGTTTSSCSTTTSSTTTHHHHT--TTTSTTTTHHHHH
T ss_pred hHHHHHHHHHHHHHHc---cC-CChHHHHHHHHhCC-CHHHHHHHHhcCCCCHHHHHHhhHHHHH--hCCCHHHHHHHHH
Confidence 9999999998765433 33 67888888888874 3556666554321 12344556788888 8899999999999
Q ss_pred HHHHHHHHHHHHHHHh-ccCCCCCCCCccEEEEcCcccCcccccchHHHHHHHHhhCCCceeeCCCCCcccccccccccc
Q 017527 262 SVEELALSVKAVVQRL-SLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIRPKVCIWPHWHSCDQAS 340 (370)
Q Consensus 262 a~~~Lg~~l~~vv~~l-~~~~~~~~~P~~VVlgGgv~~~~~~~~l~~~v~~~l~~~~p~~~~~~p~~~~~~~~~~~~~~~ 340 (370)
++++|+..+ .++.+ | |+.||||||++.+ | ++.+++.+++ |..+ +.. .+++
T Consensus 217 ~~~~La~~i--~~~~~~~--------p~~vvlgGGv~~~---l--~~~l~~~l~~--~~~~----------i~~--~~~a 267 (291)
T 1zxo_A 217 SFIAFFRRN--VMQYDYK--------QYPVHFIGSIAYC---Y--KEILQDAARQ--TGIQ----------IGK--ILQS 267 (291)
T ss_dssp HHHHHHTTT--GGGSCTT--------TSCEEECSHHHHH---T--HHHHHHHTTT--TTCC----------EEE--ECSC
T ss_pred HHHHHHHHH--hcccCCC--------CceEEEECcHHHH---H--HHHHHHHHhc--CCcE----------Eee--cCCC
Confidence 999999999 34555 6 8999999999876 5 7888888876 3222 222 2356
Q ss_pred cccccceeE
Q 017527 341 ANCCGAALC 349 (370)
Q Consensus 341 ~~~~~~~~~ 349 (370)
+++||+.|+
T Consensus 268 ~~~GAa~la 276 (291)
T 1zxo_A 268 PMEGLIQYH 276 (291)
T ss_dssp THHHHHTTS
T ss_pred HHHHHHHHH
Confidence 689999887
No 6
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=100.00 E-value=1.2e-38 Score=307.58 Aligned_cols=292 Identities=15% Similarity=0.054 Sum_probs=225.1
Q ss_pred CCCcEEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEEEEecCCCccccCHHHHHHHHHHHHHHHHHHcCCCccCcceE
Q 017527 19 GGREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAV 98 (370)
Q Consensus 19 ~~~~~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~~~~~~~n~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~v~~I 98 (370)
+|+.|+||||+|+|+++++++|. +|+++.+.+.++++. .+++++++.+.+++++++++.+.++.++.+|
T Consensus 3 ~m~~~~lgiDiggt~~~~~l~d~---------~g~il~~~~~~~~~~--~~~~~~~~~l~~~i~~~~~~~~~~~~~i~~i 71 (326)
T 2qm1_A 3 AMDKKIIGIDLGGTTIKFAILTT---------DGVVQQKWSIETNIL--EDGKHIVPSIIESIRHRIDLYNMKKEDFVGI 71 (326)
T ss_dssp GGGCEEEEEEECSSEEEEEEEET---------TCCEEEEEEEECCCT--TTTTTHHHHHHHHHHHHHHHTTCCGGGEEEE
T ss_pred CcccEEEEEEECCCEEEEEEECC---------CCCEEEEEEEcCCCC--CCHHHHHHHHHHHHHHHHHHcCCCccceeEE
Confidence 45579999999999999999999 899999888776543 3678899999999999999888777789999
Q ss_pred EEeecCCCChhh------------HH-HHHHHHHhhCCCCceEEEeChHHHHHHhhc-C----CCCCeEEEEEcccceee
Q 017527 99 CLAVSGVNHPTD------------QQ-RILNWLRDIFPGNVRLYVHNDALAALASGT-M----GKLHGCVLIAGTGTIAY 160 (370)
Q Consensus 99 gIgvpG~~~~~~------------~~-~l~~~L~~~f~~~~pV~V~NDa~aa~~g~~-~----g~~~~v~l~~GTGi~g~ 160 (370)
|||+||++++.. .. +|++.|++.|+ .||+|+||++++++++. + +.++++++++|||+ |+
T Consensus 72 gi~~pG~vd~~~g~v~~~~~l~w~~~~~l~~~l~~~~~--~pv~v~ND~~aaa~~e~~~g~~~~~~~~~~l~~GtGi-G~ 148 (326)
T 2qm1_A 72 GMGTPGSVDIEKGTVVGAYNLNWTTVQPVKEQIESALG--IPFALDNDANVAALGERWKGAGENNPDVIFITLGTGV-GG 148 (326)
T ss_dssp EEEESSEEETTTTEEECBGGGTBCSCBCHHHHHHHHHC--SCEEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSSE-EE
T ss_pred EEecccceeCCCCEEEecCCCCccCCchHHHHHHHHhC--CCEEEecHHHHHHHHHHHhCCCCCCCcEEEEEECCce-EE
Confidence 999999864321 14 88999999998 89999999999999874 2 45789999999997 67
Q ss_pred eeccCCceEe-----eCCCCCCcCCCC-chHHHHHHHHHHHHHHHcCCCCCchhHHHHHHHcCCCChhhHHHHhccCCCh
Q 017527 161 GFTEDGRDAR-----AAGAGPILGDWG-SGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDPSW 234 (370)
Q Consensus 161 gii~dG~l~~-----aGg~G~llgd~G-s~~~iG~~~~~~~~~~~dg~~~~~~l~~~~~~~~~~~s~~~l~~~~~~~~~~ 234 (370)
|++.||++++ +|||||+..+.+ ..|+||..+|.+.+. +.+++.+.+.+.+.......++.+.+.+..
T Consensus 149 giv~~G~l~~G~~g~aGE~Gh~~~~~~g~~c~cG~~gcle~~~------s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~- 221 (326)
T 2qm1_A 149 GIVAAGKLLHGVAGCAGEVGHVTVDPNGFDCTCGKRGCLETVS------SATGVVRVARHLSEEFAGDSELKQAIDDGQ- 221 (326)
T ss_dssp EEEETTEECCCSSSCTTCGGGSBSCTTSCBCTTSSBCBTHHHH------SHHHHHHHHHHHTTTCCSCCHHHHHHHHTC-
T ss_pred EEEECCEEeecCCCcccccCcEEECCCCCcCCCCCccchHhhh------CHHHHHHHHHHHhhcccccchhhhcccccc-
Confidence 8999999987 999999988764 456777655543321 223455555544432222233333321110
Q ss_pred HHHhhhHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHHHHH
Q 017527 235 ARIAALVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCIL 314 (370)
Q Consensus 235 ~~~a~~~~~v~~~A~~GD~~A~~il~~a~~~Lg~~l~~vv~~l~~~~~~~~~P~~VVlgGgv~~~~~~~~l~~~v~~~l~ 314 (370)
...+++|+++|++||+.|.+++++++++|+..+.++++.+| |+.|||||+++...+.| .+.+++.++
T Consensus 222 ---~~~~~~v~~~a~~gd~~a~~i~~~~~~~L~~~i~~l~~~l~--------p~~IvlgGg~~~~~~~~--~~~l~~~l~ 288 (326)
T 2qm1_A 222 ---DVSSKDVFEFAEKGDHFALMVVDRVCFYLGLATGNLGNTLN--------PDSVVIGGGVSAAGEFL--RSRVEKYFQ 288 (326)
T ss_dssp ---CCCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHC--------CSEEEEEESGGGGTHHH--HHHHHHHHH
T ss_pred ---CCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHhcC--------CCEEEEcChhhhchHHH--HHHHHHHHH
Confidence 12467899999999999999999999999999999999999 79999999999887776 899999998
Q ss_pred hhCCCceeeCCCCCccccccccccc-ccccccceeE
Q 017527 315 RDYPGAVPIRPKVCIWPHWHSCDQA-SANCCGAALC 349 (370)
Q Consensus 315 ~~~p~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~ 349 (370)
++.+... .....+..+..++ ++++|||.++
T Consensus 289 ~~~~~~~-----~~~~~i~~~~~~~~a~~~GAa~l~ 319 (326)
T 2qm1_A 289 EFTFPQV-----RNSTKIKLAELGNEAGVIGAASLA 319 (326)
T ss_dssp HTSCHHH-----HTTSEEEECSSGGGHHHHHHHHHG
T ss_pred Hhhhhcc-----CCCcEEEEcCcCchHHHHHHHHHH
Confidence 8643211 1233455555444 6789999887
No 7
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=100.00 E-value=8.8e-38 Score=302.20 Aligned_cols=289 Identities=17% Similarity=0.088 Sum_probs=213.7
Q ss_pred cEEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEEEEecCCCccccCHHHHHHHHHHHHHHHHHHcCCCccCcceEEEe
Q 017527 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLA 101 (370)
Q Consensus 22 ~~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~~~~~~~n~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~v~~IgIg 101 (370)
+|+||||+|+|+++++++|. +|+++.+.+.+++ .+++++++.|.+.+++++++ .++.+||||
T Consensus 2 ~~~lgiDiGgt~i~~~l~d~---------~G~i~~~~~~~~~----~~~~~~~~~i~~~i~~~~~~-----~~i~gigi~ 63 (321)
T 3vgl_A 2 GLTIGVDIGGTKIAAGVVDE---------EGRILSTFKVATP----PTAEGIVDAICAAVAGASEG-----HDVEAVGIG 63 (321)
T ss_dssp CEEEEEEECSSEEEEEEECT---------TCCBCCCEEEECC----SSHHHHHHHHHHHHHHHHTT-----CCEEEEEEE
T ss_pred cEEEEEEECCCEEEEEEECC---------CCCEEEEEEeeCC----CCHHHHHHHHHHHHHHHHhh-----cCceEEEEe
Confidence 48999999999999999999 8999988877662 36899999999999998753 368999999
Q ss_pred ecCCCChhh------------HHHHHHHHHhhCCCCceEEEeChHHHHHHhhc-----CCCCCeEEEEEcccceeeeecc
Q 017527 102 VSGVNHPTD------------QQRILNWLRDIFPGNVRLYVHNDALAALASGT-----MGKLHGCVLIAGTGTIAYGFTE 164 (370)
Q Consensus 102 vpG~~~~~~------------~~~l~~~L~~~f~~~~pV~V~NDa~aa~~g~~-----~g~~~~v~l~~GTGi~g~gii~ 164 (370)
+||++++.. ..+|++.|+++|+ +||+|+||+|++++++. .+.++++++++|||+ |+|++.
T Consensus 64 ~pG~vd~~~g~v~~~~~l~w~~~~l~~~l~~~~~--~pv~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtGi-G~gii~ 140 (321)
T 3vgl_A 64 AAGYVDDKRATVLFAPNIDWRHEPLKDKVEQRVG--LPVVVENDANAAAWGEYRFGAGQGHDDVICITLGTGL-GGGIII 140 (321)
T ss_dssp ESSEECTTSSCEEECSSSCCEEECHHHHHHHHHC--SCEEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSSE-EEEEEE
T ss_pred ccccEeCCCCEEEeCCCCCCcCCCHHHHHhhhhC--CCEEEEehhhhHHHHHHHhCCCCCCCCEEEEEeCcce-EEEEEE
Confidence 999976532 2479999999998 89999999999999874 245799999999997 678999
Q ss_pred CCceEe-----eCCCCCCcCCC-CchHHHHHHHHHHHHHHHcCCCCCchhHHHHHHHcCCCChh--hHHHHhccCCChHH
Q 017527 165 DGRDAR-----AAGAGPILGDW-GSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPD--ELIGWTYVDPSWAR 236 (370)
Q Consensus 165 dG~l~~-----aGg~G~llgd~-Gs~~~iG~~~~~~~~~~~dg~~~~~~l~~~~~~~~~~~s~~--~l~~~~~~~~~~~~ 236 (370)
||++++ +||+||+..+. |..|.||..+|. +...+...+.+.+.+........ .++....... .
T Consensus 141 ~G~l~~G~~g~aGEiGh~~v~~~g~~c~cG~~gcl------E~~~S~~al~~~~~~~~~~~~~~~~~~~~~~~~~~--~- 211 (321)
T 3vgl_A 141 GNKLRRGRFGVAAEFGHIRVVPDGLLCGCGSQGCW------EQYASGRALVRYAKQRANATPENAAVLLGLGDGSV--D- 211 (321)
T ss_dssp TTEECCCTTSCCCCGGGSBSSTTCSBCTTSCBSBG------GGTSSHHHHHHHHHHHHHHCGGGCHHHHHTTTSSS--T-
T ss_pred CCEEecCCCCCCccccceEecCCCCCCCCCCcCcH------HHhcCHHHHHHHHHHHhhcCCcchhhhhhcccCcc--c-
Confidence 999875 89999987754 334555544331 22222223333222211100000 0000000000 0
Q ss_pred HhhhHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHHHHHhh
Q 017527 237 IAALVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRD 316 (370)
Q Consensus 237 ~a~~~~~v~~~A~~GD~~A~~il~~a~~~Lg~~l~~vv~~l~~~~~~~~~P~~VVlgGgv~~~~~~~~l~~~v~~~l~~~ 316 (370)
....++|+++|++||+.|++++++++++||..++++++.|| |+.|||||+++...+.| ++.+++.++++
T Consensus 212 -~~~~~~i~~~a~~gD~~a~~~~~~~~~~La~~i~~l~~~l~--------p~~IvlgGgi~~~~~~l--~~~l~~~l~~~ 280 (321)
T 3vgl_A 212 -GIEGKHISEAARQGDPVAVDSFRELARWAGAGLADLASLFD--------PSAFIVGGGVSDEGELV--LDPIRKSFRRW 280 (321)
T ss_dssp -TCCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHC--------CSEEEEESGGGGGTHHH--HHHHHHHHHHH
T ss_pred -cCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhC--------CCEEEEeChhhcchHHH--HHHHHHHHHHh
Confidence 12457899999999999999999999999999999999999 79999999999988776 89999999987
Q ss_pred CCCceeeCCCCCccccccccccc-ccccccceeEeeeccc
Q 017527 317 YPGAVPIRPKVCIWPHWHSCDQA-SANCCGAALCRIQLYP 355 (370)
Q Consensus 317 ~p~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 355 (370)
.+... .....+|..+..++ ++++|||+++..|+.+
T Consensus 281 ~~~~~----~~~~~~i~~s~l~~~a~l~GAa~l~~~~~~~ 316 (321)
T 3vgl_A 281 LIGGE----WRPHAQVLAAQLGGKAGLVGAADLARQGLEH 316 (321)
T ss_dssp CTTGG----GSCCCEEEECTTGGGHHHHHHHHHHHTC---
T ss_pred ccccc----ccCCCEEEECCCCCcHHHHHHHHHHHhhhhh
Confidence 75322 22345666777655 7889999998766644
No 8
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=100.00 E-value=1.1e-36 Score=294.57 Aligned_cols=275 Identities=17% Similarity=0.119 Sum_probs=205.8
Q ss_pred CcEEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEEEEecCCCccccCHHHHHHHHHHHHHHHHHHcCCCccCcceEEE
Q 017527 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCL 100 (370)
Q Consensus 21 ~~~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~~~~~~~n~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~v~~IgI 100 (370)
..|+||||+|+|+++++++|. +|+++.+.+.+++.. .+++++++.+.+.++++++ ...++.+|||
T Consensus 18 ~~~~lgidiggt~i~~~l~d~---------~g~il~~~~~~~~~~--~~~~~~~~~i~~~i~~~~~----~~~~i~gigi 82 (321)
T 3r8e_A 18 QGMILGIDVGGTSVKFGLVTP---------EGEIQNATRFMTADW--VNGIGFVESMKLEIGNFLK----QYPIVKGVGI 82 (321)
T ss_dssp -CCEEEEECCSSEEEEEEECT---------TCCEEEEEEEEHHHH--HTTTCHHHHHHHHHHHHHH----HCTTCCEEEE
T ss_pred CcEEEEEEECCCEEEEEEEcC---------CCcEEEEEEEeCCCC--CCHHHHHHHHHHHHHHHHh----ccCCeeEEEE
Confidence 459999999999999999999 899999887765422 3577889999999999886 2357999999
Q ss_pred eecCCCChh------------h-HHHHHHHHHhhC-CCCceEEEeChHHHHHHhhc-C----CCCCeEEEEEcccceeee
Q 017527 101 AVSGVNHPT------------D-QQRILNWLRDIF-PGNVRLYVHNDALAALASGT-M----GKLHGCVLIAGTGTIAYG 161 (370)
Q Consensus 101 gvpG~~~~~------------~-~~~l~~~L~~~f-~~~~pV~V~NDa~aa~~g~~-~----g~~~~v~l~~GTGi~g~g 161 (370)
|+||+++++ | ..+|++.|+++| + +||+|+||+||+++++. + +.++++++++|||+ |+|
T Consensus 83 ~~pG~vd~~~g~v~~~~~l~~w~~~~l~~~l~~~~~~--~pV~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtGi-G~g 159 (321)
T 3r8e_A 83 GWPGLVSLDRTKVILLPNIPSVVNVPIVEILRSEFPH--IHFKIENDAKCAALGEYYFGENKRMQTFILLALGTGV-GSG 159 (321)
T ss_dssp EESSEECTTSCCEEEBTTBCCCCSCCHHHHHHHHCTT--SEEEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSSE-EEE
T ss_pred EecccEECCCCEEEeCCCCccccCCCHHHHHHHHcCC--CCEEEEchHHHHHHHHHHhCCCCCCCcEEEEEECCce-EEE
Confidence 999997632 2 258999999999 7 89999999999999874 2 45899999999997 678
Q ss_pred eccCCceEe-----eCCCCCCcCCCCchHHHHHHHHHHHHHHHcCCCCCchhHHHHHHHcCCCChhhHHHHhccCCChHH
Q 017527 162 FTEDGRDAR-----AAGAGPILGDWGSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDPSWAR 236 (370)
Q Consensus 162 ii~dG~l~~-----aGg~G~llgd~Gs~~~iG~~~~~~~~~~~dg~~~~~~l~~~~~~~~~~~s~~~l~~~~~~~~~~~~ 236 (370)
++.||++++ +|||||+. +.+.+|+ +.+ .+...+.+.+.+.+.......+ .+. ..
T Consensus 160 ii~~G~l~~G~~g~aGEiGh~~-~~~~gcl-------E~~------~S~~al~~~~~~~~~~~~~~~~---~~~----~~ 218 (321)
T 3r8e_A 160 VMMNGKLFIGGRGNGTEVGHML-TTRGKSL-------ENQ------VGINHLIAYTHEQLALDVAKKS---SLH----TI 218 (321)
T ss_dssp EEETTEECCCTTSCCCCGGGCB-CTTSSBS-------HHH------HSHHHHHHHHHHHHHHCTTCCC---SGG----GC
T ss_pred EEECCEEecCCCCCCccccccc-CCCCCcH-------HHh------cCHHHHHHHHHHHhhccCcccc---ccc----cc
Confidence 999999976 99999998 7652211 000 0111222222211100000000 000 00
Q ss_pred HhhhHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHHHHHhh
Q 017527 237 IAALVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRD 316 (370)
Q Consensus 237 ~a~~~~~v~~~A~~GD~~A~~il~~a~~~Lg~~l~~vv~~l~~~~~~~~~P~~VVlgGgv~~~~~~~~l~~~v~~~l~~~ 316 (370)
-....++|+++|++||+.|++++++++++||..+++++++|| |+.|||||+++...+.| ++.+++.++++
T Consensus 219 ~~~~~~~i~~~a~~gD~~a~~~~~~~~~~La~~i~~l~~~ld--------P~~IvlgG~i~~~~~~l--~~~l~~~l~~~ 288 (321)
T 3r8e_A 219 AELSPKVIADHAAQGDALALAVWADIGTIIGESLVNIVRVMD--------LNNILLGGGISGAFDYF--VPNLKKAMLEH 288 (321)
T ss_dssp SSCCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHC--------CCEEEEESGGGGGHHHH--HHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHC--------CCEEEEeChhcccchHH--HHHHHHHHHHh
Confidence 012457899999999999999999999999999999999999 79999999999887776 99999999987
Q ss_pred CCCceeeCCCCCccccccccccc-ccccccceeE
Q 017527 317 YPGAVPIRPKVCIWPHWHSCDQA-SANCCGAALC 349 (370)
Q Consensus 317 ~p~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~ 349 (370)
.+... ....+|..++.++ ++++|||+++
T Consensus 289 ~~~~~-----~~~~~i~~s~l~~~a~~~GAa~l~ 317 (321)
T 3r8e_A 289 LPTYY-----TDDMYIGKATLENDAGLLGAAGLI 317 (321)
T ss_dssp SCHHH-----HTTCEEEECSSGGGHHHHHHHHHH
T ss_pred ccccc-----CCCCEEEEcCCCCcHHHHHHHHHH
Confidence 64321 2234666777665 7789999887
No 9
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=100.00 E-value=4.4e-36 Score=291.15 Aligned_cols=278 Identities=15% Similarity=0.041 Sum_probs=206.4
Q ss_pred EEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEEEEecCCCccccCHHHHHHHHHHHHHHHHHHcCCCccCcceEEEee
Q 017527 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAV 102 (370)
Q Consensus 23 ~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~~~~~~~n~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~v~~IgIgv 102 (370)
|+||||+|+|+++++++|. +|+++.+.+.++++. +++++++.|.+.++++..+.+ .+.+|||++
T Consensus 25 ~~lgiDiGgt~i~~~l~d~---------~G~il~~~~~~~~~~---~~~~~~~~i~~~i~~~~~~~~----~~~gigi~~ 88 (327)
T 4db3_A 25 MYYGFDVGGTKIEFGAFNE---------KLERVATERVPTPTD---DYPLLLETIAGLVAKYDQEFA----CEGKIGLGL 88 (327)
T ss_dssp CEEEEEECSSEEEEEEECT---------TCCEEEEEEEECCTT---CHHHHHHHHHHHHHHHHHHHT----SCCEEEEEE
T ss_pred EEEEEEECCCEEEEEEEeC---------CCcEEEEEEecCCCC---CHHHHHHHHHHHHHHHHHhcC----CccEEEEEe
Confidence 7999999999999999999 899999988776542 689999999999999887653 378999999
Q ss_pred cCCCChh----------h--HHHHHHHHHhhCCCCceEEEeChHHHHHHhhc-C----CCCCeEEEEEcccceeeeeccC
Q 017527 103 SGVNHPT----------D--QQRILNWLRDIFPGNVRLYVHNDALAALASGT-M----GKLHGCVLIAGTGTIAYGFTED 165 (370)
Q Consensus 103 pG~~~~~----------~--~~~l~~~L~~~f~~~~pV~V~NDa~aa~~g~~-~----g~~~~v~l~~GTGi~g~gii~d 165 (370)
||+++++ | ..+|++.|+++|+ +||+|+||+||+++++. + +.++++++++|||+ |+|++.|
T Consensus 89 pG~vd~~~g~v~~~~~~~~~~~~l~~~l~~~~~--~pV~v~NDa~aaalgE~~~g~~~~~~~~~~l~~GtGi-G~gii~~ 165 (327)
T 4db3_A 89 PGMEDADDATVLTVNVPAAKGKPLRADLEAKIG--RSVKIENDANCFALSEAWDEELQDAPSVMGLILGTGF-GGGLIYE 165 (327)
T ss_dssp SEEECTTTCCEEESSSGGGTTSCHHHHHHHHHS--SCCEEEEHHHHHHHHHHTSTTTTTCSEEEEEEESSSE-EEEEEET
T ss_pred eccEeCCCCEEEcCCCccccCCCHHHHHHHHHC--CCEEEecchhHHHHHHHHhCCCCCCCcEEEEEeCccc-eEEEEEC
Confidence 9997643 2 2488999999998 89999999999999884 3 34789999999998 6689999
Q ss_pred CceEe-----eCCCCCCcCCCCchHHHHHHHHHHHHHHHcCCCCCchhHHHHHHHcCCCChhhHHHHhccCCChHHHhhh
Q 017527 166 GRDAR-----AAGAGPILGDWGSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDPSWARIAAL 240 (370)
Q Consensus 166 G~l~~-----aGg~G~llgd~Gs~~~iG~~~~~~~~~~~dg~~~~~~l~~~~~~~~~~~s~~~l~~~~~~~~~~~~~a~~ 240 (370)
|++++ +||+||+..+.....+++. ..+|+.|.|.-. .++|.+. |...+.+++... ......
T Consensus 166 G~l~~G~~g~aGEiGh~~v~~~~~~~~~~--------~~~g~~C~cG~~-gclE~~~--S~~al~~~~~~~---~~~~~~ 231 (327)
T 4db3_A 166 GKVFSGRNNVAGELGHMRLPLDAWFHLGD--------NAPLLGCGCGKK-GCLDSYL--SGRGFELLYAHY---YGEEKK 231 (327)
T ss_dssp TEECCCTTSCTTCGGGSBCCHHHHHHTCT--------TCCCCBCTTSCB-SBGGGTS--SHHHHHHHHHHH---HSCCCC
T ss_pred CEEeecCCCcCcccccEEecccccccccc--------ccCCCcCCCCCc-chhHhhh--CHHHHHHHHHHh---cCCCCC
Confidence 99865 7888887665311100000 002222222211 1233332 333443332100 000124
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHHHHHhhCCCc
Q 017527 241 VPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGA 320 (370)
Q Consensus 241 ~~~v~~~A~~GD~~A~~il~~a~~~Lg~~l~~vv~~l~~~~~~~~~P~~VVlgGgv~~~~~~~~l~~~v~~~l~~~~p~~ 320 (370)
.++|+++|++||+.|++++++++++|+..+.++++.|| |+.|||||+++.. +.| ++.+++.++++.+..
T Consensus 232 ~~~i~~~a~~gD~~a~~~~~~~~~~La~~i~~l~~~l~--------p~~IvlgGgi~~~-~~l--~~~l~~~l~~~~~~~ 300 (327)
T 4db3_A 232 AIDIIKANAAGDEKAAEHVERFMELLAICFGNIFTAND--------PHVVALGGGLSNF-ELI--YEEMPKRVPKYLLSV 300 (327)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHC--------CSEEEEESGGGGC-THH--HHHHHHHGGGGSCTT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhC--------CCEEEEeCcccch-HHH--HHHHHHHHHHHhccc
Confidence 57899999999999999999999999999999999999 7999999999986 454 889999998875422
Q ss_pred eeeCCCCCccccccccccc-ccccccceeEe
Q 017527 321 VPIRPKVCIWPHWHSCDQA-SANCCGAALCR 350 (370)
Q Consensus 321 ~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~ 350 (370)
....+|..+..++ ++++|||++++
T Consensus 301 ------~~~~~i~~s~lg~~a~~~GAa~l~l 325 (327)
T 4db3_A 301 ------AKCPKIIKAKHGDSGGVRGAAFLNI 325 (327)
T ss_dssp ------CCCCEEEECSCGGGHHHHHHHHTTC
T ss_pred ------cCCCEEEECCCCCcHHHHHHHHHHh
Confidence 1245677777665 77899998873
No 10
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=100.00 E-value=7e-36 Score=295.33 Aligned_cols=265 Identities=14% Similarity=0.111 Sum_probs=209.1
Q ss_pred CcEEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEEEEecCCCccccCHHHHHHHHHHHHHHHHHHcCCCccCcceEEE
Q 017527 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCL 100 (370)
Q Consensus 21 ~~~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~~~~~~~n~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~v~~IgI 100 (370)
..|+||||+|+|+++++++|. +|+++.+.+.+++.. .+++++++.+.+.+++++++.+.++.++.+|||
T Consensus 86 ~~~~lGIDiGgt~i~~~l~d~---------~G~vl~~~~~~~~~~--~~~~~~~~~l~~~i~~~~~~~~~~~~~i~gigi 154 (380)
T 2hoe_A 86 CAYVLGIEVTRDEIAACLIDA---------SMNILAHEAHPLPSQ--SDREETLNVMYRIIDRAKDMMEKLGSKLSALTV 154 (380)
T ss_dssp GCEEEEEEECSSEEEEEEEET---------TCCEEEEEEEECCSS--CCHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEE
T ss_pred CCeEEEEEECCCEEEEEEECC---------CCCEEEEEEEccCCC--CCHHHHHHHHHHHHHHHHHhcCCCcCcEEEEEE
Confidence 358999999999999999999 899999888776543 368999999999999999887666678999999
Q ss_pred eecCCCChhh------------HHHHHHHHHhhCCCCceEEEeChHHHHHHhhc-CCC--CCeEEEEEcccceeeeeccC
Q 017527 101 AVSGVNHPTD------------QQRILNWLRDIFPGNVRLYVHNDALAALASGT-MGK--LHGCVLIAGTGTIAYGFTED 165 (370)
Q Consensus 101 gvpG~~~~~~------------~~~l~~~L~~~f~~~~pV~V~NDa~aa~~g~~-~g~--~~~v~l~~GTGi~g~gii~d 165 (370)
|+||++++.. ..++++.|++.|+ +||+|+||+|++++++. +|. ++++++++|||+ |+|++.|
T Consensus 155 ~~pG~vd~~~g~v~~~~~l~w~~~~l~~~l~~~~~--~pV~v~NDanaaalaE~~~g~~~~~~v~l~~GtGi-G~giv~~ 231 (380)
T 2hoe_A 155 AAPGPIDTERGIIIDPRNFPLSQIPLANLLKEKYG--IEVWVENDADMGAVGEKWYTKRDDSFAWILTGKGI-GAGIIID 231 (380)
T ss_dssp EESSCEETTTTEECCCSSCTTBTSCHHHHHHHHHC--SEEEEEEHHHHHHHHHHHHTTCCSCEEEEEESSSC-EEEEEET
T ss_pred EeeccEECCCCEEeccCCCCCcCCChHHHHHHHhC--CCEEEechHHHHHHHHHHhCCCCCcEEEEEeCCce-EEEEEEC
Confidence 9999976421 2478999999998 89999999999999884 454 799999999998 6789999
Q ss_pred CceEe-----eCCCCCCcCCCCchHHHHHHHHHHHHHHHcCCCCCchhHHHHHHHcCCCChhhHHHHhccCCChHHHhhh
Q 017527 166 GRDAR-----AAGAGPILGDWGSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDPSWARIAAL 240 (370)
Q Consensus 166 G~l~~-----aGg~G~llgd~Gs~~~iG~~~~~~~~~~~dg~~~~~~l~~~~~~~~~~~s~~~l~~~~~~~~~~~~~a~~ 240 (370)
|++++ +|||||+..+.+..|.||..+| ++.|. +...+.. .
T Consensus 232 G~l~~G~~g~aGEiGh~~v~~~~~c~cG~~gc--------------------lE~~~--s~~~l~~-------------~ 276 (380)
T 2hoe_A 232 GELYRGENGYAGEIGYTRVFNGNEYVFLEDVC--------------------NENVV--LKHVLSM-------------G 276 (380)
T ss_dssp TEECCCSSSCCCCGGGCEEECSSSEEEHHHHH--------------------CHHHH--HHHHHHH-------------C
T ss_pred CEEeccCCCccccccceEecCCCCCCCCCccH--------------------HHHHc--CHHHHHH-------------H
Confidence 99864 8889998765543344444433 22221 2222221 2
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHHHHHhhCCCc
Q 017527 241 VPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGA 320 (370)
Q Consensus 241 ~~~v~~~A~~GD~~A~~il~~a~~~Lg~~l~~vv~~l~~~~~~~~~P~~VVlgGgv~~~~~~~~l~~~v~~~l~~~~p~~ 320 (370)
.++++++|++||+.|.+++++++++|+..++++++.|| |+.|||||+++...+.| .+.+++.++++.+..
T Consensus 277 ~~~v~~~a~~gD~~a~~~l~~~~~~La~~i~~l~~~ld--------P~~IvlgG~~~~~~~~l--~~~l~~~l~~~~~~~ 346 (380)
T 2hoe_A 277 FSSLAEARDSGDVRVKEYFDDIARYFSIGLLNLIHLFG--------ISKIVIGGFFKELGENF--LKKIKIEVETHLLYK 346 (380)
T ss_dssp CC-TTHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHC--------CCEEEEEEGGGGGHHHH--HHHHHHHHHHHCSSS
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHhC--------CCEEEEcCchhhhhHHH--HHHHHHHHHHhcCCC
Confidence 34678889999999999999999999999999999999 79999999998877666 899999999876432
Q ss_pred eeeCCCCCccccccccccc-ccccccceeEee
Q 017527 321 VPIRPKVCIWPHWHSCDQA-SANCCGAALCRI 351 (370)
Q Consensus 321 ~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~ 351 (370)
....+..+..++ ++++|||++++.
T Consensus 347 -------~~~~i~~s~~~~~a~~~GAa~l~~~ 371 (380)
T 2hoe_A 347 -------HSVDMSFSKVQEPVIAFGAAVHALE 371 (380)
T ss_dssp -------CCCEEEECCCCSCHHHHHHHHHHHH
T ss_pred -------CCcEEEEcCCCCcHHHHHHHHHHHH
Confidence 234455555554 678999988743
No 11
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=100.00 E-value=1.9e-35 Score=282.98 Aligned_cols=261 Identities=13% Similarity=0.086 Sum_probs=194.1
Q ss_pred EEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEEEEecCCCccccCHHHHHHHHHHHHHHHHHHcCCCccCcceEEEee
Q 017527 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAV 102 (370)
Q Consensus 23 ~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~~~~~~~n~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~v~~IgIgv 102 (370)
|+||||+|+|+++++++|. +|+++.+.+.++++. +++++++.+.+.+ ++ ..++.+|||++
T Consensus 5 ~~lgiDiGgt~i~~~l~d~---------~G~il~~~~~~~~~~---~~~~~~~~i~~~~----~~----~~~i~gigi~~ 64 (297)
T 4htl_A 5 KIAAFDIGGTALKMGVVLP---------HGEIILTKSAEISGS---DGDQILAEMKVFL----AE----NTDVTGIAVSA 64 (297)
T ss_dssp CEEEEEECSSEEEEEEECT---------TSCEEEEEEEECSTT---CHHHHHHHHHHHH----HT----CTTCCEEEEEE
T ss_pred EEEEEEeCCCeEEEEEECC---------CCCEEEEEEecCCCC---CHHHHHHHHHHHH----hh----cCCeeEEEEec
Confidence 7999999999999999999 899999888776533 4566666655543 32 24699999999
Q ss_pred cCCCChh------------h-HHHHHHHHHhhCCCCceEEEeChHHHHHHhhc-C----CCCCeEEEEEcccceeeeecc
Q 017527 103 SGVNHPT------------D-QQRILNWLRDIFPGNVRLYVHNDALAALASGT-M----GKLHGCVLIAGTGTIAYGFTE 164 (370)
Q Consensus 103 pG~~~~~------------~-~~~l~~~L~~~f~~~~pV~V~NDa~aa~~g~~-~----g~~~~v~l~~GTGi~g~gii~ 164 (370)
||++++. | ..+|+++|+++|+ +||+|+||+||+++++. + +.++++++++|||+ |+|++.
T Consensus 65 pG~vd~~~g~v~~~~~l~~w~~~~l~~~l~~~~~--~pV~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtGi-G~giv~ 141 (297)
T 4htl_A 65 PGYVNPKTGLITMGGAIRRFDNFNLKEWLEAETG--LPVAIENDANCALLAEKWLGKGQDLDDFLCLTIGTGI-GGGIFS 141 (297)
T ss_dssp SSEECTTTCEEEECTTCGGGTTEEHHHHHHHHHC--SCEEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSSE-EEEEEE
T ss_pred CcceeCCCCEEEeCCCCCCccCCCHHHHHHHHHC--cCEEEecHHHHHHHHHHHhCCCCCCCcEEEEEECcce-EEEEEE
Confidence 9986632 2 1478999999998 89999999999999874 2 45799999999998 668999
Q ss_pred CCceEe-----eCCCCCCcCCCCchHHHHHHHHHHHHHHHcCCCCCchhHHHHHHHcCCCChhhHHHHhcc--CCChHHH
Q 017527 165 DGRDAR-----AAGAGPILGDWGSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYV--DPSWARI 237 (370)
Q Consensus 165 dG~l~~-----aGg~G~llgd~Gs~~~iG~~~~~~~~~~~dg~~~~~~l~~~~~~~~~~~s~~~l~~~~~~--~~~~~~~ 237 (370)
||++++ +||+||+..+..+...+++. +++.+. +...+.+++.. .....
T Consensus 142 ~G~l~~G~~g~aGEiGh~~~~~~~~~~~~~~---------------------~le~~~--s~~~l~~~~~~~~~~~~~-- 196 (297)
T 4htl_A 142 NGELVRGGRFRAGEFGYMFSERPGAFRPGKY---------------------TLNETT--TMLVLRRQYAELTGRPLE-- 196 (297)
T ss_dssp TTEECCCTTSCCCCGGGSBSSCCCSSCGGGG---------------------BHHHHS--SHHHHHHHHHHHHCCCGG--
T ss_pred CCEEEecCCCCcccccceEecCCCCcCcccC---------------------cHHHhc--cHHHHHHHHHHHhcCCcc--
Confidence 999975 89999997764322111110 112222 22233322110 00000
Q ss_pred hhhHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHHHHHhhC
Q 017527 238 AALVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDY 317 (370)
Q Consensus 238 a~~~~~v~~~A~~GD~~A~~il~~a~~~Lg~~l~~vv~~l~~~~~~~~~P~~VVlgGgv~~~~~~~~l~~~v~~~l~~~~ 317 (370)
....++|+++|++||+.|++++++++++||..+.++++.+| |+.|||||+++.. +.| ++.+++.++++.
T Consensus 197 ~~~~~~i~~~a~~gd~~a~~~~~~~~~~La~~i~~l~~~~~--------p~~IvlgGgi~~~-~~~--~~~l~~~l~~~~ 265 (297)
T 4htl_A 197 EITGEEIFANYDAHDAVSERLITEFYTGICTGLYNLIYLFD--------PTHIFIGGGITSR-PTF--IAELKHHMESFG 265 (297)
T ss_dssp GCCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHC--------CSEEEEESGGGGS-TTH--HHHHHHHHTTTC
T ss_pred CCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhC--------CCEEEEeCccccc-HHH--HHHHHHHHHHhc
Confidence 12357899999999999999999999999999999999999 7999999999985 555 899999997643
Q ss_pred CCceeeCCCCCccccccccccc-ccccccceeEee
Q 017527 318 PGAVPIRPKVCIWPHWHSCDQA-SANCCGAALCRI 351 (370)
Q Consensus 318 p~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~ 351 (370)
+ ....|..+..++ ++++|||.+++.
T Consensus 266 ~---------~~~~i~~s~lg~~a~~~GAa~l~~~ 291 (297)
T 4htl_A 266 L---------RDTIIETATHKNQAGLLGAVYHFLQ 291 (297)
T ss_dssp C---------TTCEEEECSCTTTHHHHHHHHHHHH
T ss_pred c---------CCCeEEECCcCChHHHHhHHHHHHH
Confidence 2 234566666665 778999998843
No 12
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=100.00 E-value=7.4e-36 Score=290.85 Aligned_cols=284 Identities=15% Similarity=0.086 Sum_probs=211.3
Q ss_pred CcEEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEEEEecCCCccccCHHHHHHHHHHHHHHHHHHcCCCccCcceEEE
Q 017527 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCL 100 (370)
Q Consensus 21 ~~~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~~~~~~~n~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~v~~IgI 100 (370)
..|+||||+|+|+++++++|. +|+++.+.+.+++ .+++++++.+.+.+++++++.+....++.+|||
T Consensus 29 ~~~~lgiDiGgt~i~~~l~d~---------~G~il~~~~~~~~----~~~~~~~~~i~~~i~~~~~~~~~~~~~i~gigi 95 (343)
T 2yhw_A 29 TLSALAVDLGGTNLRVAIVSM---------KGEIVKKYTQFNP----KTYEERINLILQMCVEAAAEAVKLNCRILGVGI 95 (343)
T ss_dssp EEEEEEEEECSSEEEEEEEET---------TSCEEEEEEEECC----SSHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEE
T ss_pred CcEEEEEEECCCEEEEEEECC---------CCcEEEEEEEcCC----CCHHHHHHHHHHHHHHHHHhcccccCceEEEEE
Confidence 359999999999999999999 8999998876653 257888999999999998776544567999999
Q ss_pred eecCCCChh-------------hH-HHHHHHHHhhCCCCceEEEeChHHHHHHhhc-C----CCCCeEEEEEcccceeee
Q 017527 101 AVSGVNHPT-------------DQ-QRILNWLRDIFPGNVRLYVHNDALAALASGT-M----GKLHGCVLIAGTGTIAYG 161 (370)
Q Consensus 101 gvpG~~~~~-------------~~-~~l~~~L~~~f~~~~pV~V~NDa~aa~~g~~-~----g~~~~v~l~~GTGi~g~g 161 (370)
|+||+++++ |. .+|++.|+++|+ .||+|+||+|++++++. + +.++++++++|||+ |+|
T Consensus 96 ~~pG~vd~~~g~v~~~~~~~~~w~~~~l~~~l~~~~~--~pv~v~NDa~aaal~E~~~g~~~~~~~~v~i~~GtGi-G~g 172 (343)
T 2yhw_A 96 STGGRVNPREGIVLHSTKLIQEWNSVDLRTPLSDTLH--LPVWVDNDGNCAALAERKFGQGKGLENFVTLITGTGI-GGG 172 (343)
T ss_dssp EESSEEETTTTEEEECCTTSSSCSSEECHHHHHHHHC--SCEEEEEHHHHHHHHHHHTSTTTTCSCEEEEEESSSE-EEE
T ss_pred ecccCEeCCCCEEEeCCcCCCCCcCCCHHHHHHHHHC--CCEEEechhHHHHHHHHHhCCCCCCCcEEEEEECCCE-EEE
Confidence 999985532 11 368899999998 89999999999999874 3 34789999999997 678
Q ss_pred eccCCceEe-----eCCCCCCcCCC-CchHHHHHHHHHHHHHHHcCCCCCchhHHHHHHHcCCCChhhHHHHhccCCChH
Q 017527 162 FTEDGRDAR-----AAGAGPILGDW-GSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDPSWA 235 (370)
Q Consensus 162 ii~dG~l~~-----aGg~G~llgd~-Gs~~~iG~~~~~~~~~~~dg~~~~~~l~~~~~~~~~~~s~~~l~~~~~~~~~~~ 235 (370)
++.||++++ +|||||+..++ |..|+||..+|.+.+. +.+++.+.+.+.+.. +...+ +......
T Consensus 173 ii~~G~l~~G~~g~aGEiGh~~~~~~g~~c~cG~~gclE~~~------s~~al~~~~~~~~~~-~~~~~----~~~~~~~ 241 (343)
T 2yhw_A 173 IIHQHELIHGSSFCAAELGHLVVSLXGPDCSCGSHGCIEAYA------SGMALQREAKKLHDE-DLLLV----EGMSVPK 241 (343)
T ss_dssp EEETTEECCCTTSCTTCGGGCBCCC--CBCTTSCBSBHHHHH------SHHHHHHHHHHHHHT-TCSCC----TTCCC--
T ss_pred EEECCEEecCCCCcccccCCEEEccCCCcCCCCCCCcHHHhc------CHHHHHHHHHHhhcc-ccccc----ccccccc
Confidence 999999865 89999998876 5678887765543321 122343333332210 00000 0000000
Q ss_pred HHhhhHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHHHHHh
Q 017527 236 RIAALVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILR 315 (370)
Q Consensus 236 ~~a~~~~~v~~~A~~GD~~A~~il~~a~~~Lg~~l~~vv~~l~~~~~~~~~P~~VVlgGgv~~~~~~~~l~~~v~~~l~~ 315 (370)
.-...+++|+++|++||+.|++++++++++|+..+.+++++|| |+.|||||++. +.| .+.+++.+++
T Consensus 242 ~~~~~~~~v~~~a~~gd~~a~~il~~~~~~La~~i~~l~~~l~--------P~~IvlgG~i~---~~~--~~~l~~~l~~ 308 (343)
T 2yhw_A 242 DEAVGALHLIQAAKLGNAKAQSILRTAGTALGLGVVNILHTMN--------PSLVILSGVLA---SHY--IHIVKDVIRQ 308 (343)
T ss_dssp --CCCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHTC--------CSEEEEESTTH---HHH--HHHHHHHHHH
T ss_pred cccCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhC--------CCEEEEeCCcH---HHH--HHHHHHHHHH
Confidence 0012468899999999999999999999999999999999999 79999999996 344 8899999988
Q ss_pred hCCCceeeCCCCCcccccccccccccccccceeEe
Q 017527 316 DYPGAVPIRPKVCIWPHWHSCDQASANCCGAALCR 350 (370)
Q Consensus 316 ~~p~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (370)
+.+.. ....++..+..++.+++|||++++
T Consensus 309 ~~~~~------~~~~~i~~s~~~~~~~~GAa~l~~ 337 (343)
T 2yhw_A 309 QALSS------VQDVDVVVSDLVDPALLGAASMVL 337 (343)
T ss_dssp HSCGG------GTTCEEEECCCSCHHHHHHHHHHH
T ss_pred hcccc------cCCcEEEEccCCCchHHHHHHHHH
Confidence 65421 223455555555667899998873
No 13
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=100.00 E-value=3.1e-35 Score=282.18 Aligned_cols=270 Identities=18% Similarity=0.170 Sum_probs=203.0
Q ss_pred EEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEEEEecCCCccccCHHHHHHHHHHHHHHHHHHcCCCccCcceEEEee
Q 017527 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAV 102 (370)
Q Consensus 23 ~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~~~~~~~n~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~v~~IgIgv 102 (370)
|+||||+|+|+++++++|. + .++.+.+.+++.. ..+++++.|.+.+++++++. ..++.+||||+
T Consensus 2 ~~lgiDiGgt~i~~~l~d~---------~-~~l~~~~~~~~~~---~~~~~~~~i~~~i~~~~~~~---~~~i~gigi~~ 65 (302)
T 3vov_A 2 KVVGLDLGGTKIAAGVFDG---------K-RLLSKVVVPTPKE---GGERVAEALAEAAERAEREA---GVRGEAIGLGT 65 (302)
T ss_dssp CEEEEEECSSEEEEEEECS---------S-SBSCCEEEECCSS---CHHHHHHHHHHHHHHHHHHH---TCCCSSEEEEE
T ss_pred EEEEEEEcCCEEEEEEEeC---------C-CcEEEEEEcCCCC---ChHHHHHHHHHHHHHHHhhc---cCCceEEEEEe
Confidence 7999999999999999998 6 4556666665443 34889999999999998765 35799999999
Q ss_pred cCCCChh------------h-HHHHHHHHHhhCCCCceEEEeChHHHHHHhhc-C----CCCCeEEEEEcccceeeeecc
Q 017527 103 SGVNHPT------------D-QQRILNWLRDIFPGNVRLYVHNDALAALASGT-M----GKLHGCVLIAGTGTIAYGFTE 164 (370)
Q Consensus 103 pG~~~~~------------~-~~~l~~~L~~~f~~~~pV~V~NDa~aa~~g~~-~----g~~~~v~l~~GTGi~g~gii~ 164 (370)
||++++. | ..++++.|+++|+ +||+|+||+|++++++. + +.++++++++|||+ |+|++.
T Consensus 66 pG~vd~~~g~v~~~~~~~~w~~~~l~~~l~~~~~--~pv~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtGi-G~gii~ 142 (302)
T 3vov_A 66 PGPLDFRRGVIRFAPNIPGVQDFPIRRILEEATG--RPVFLENDANAAALAEHHLGAAQGEESSLYLTVSTGI-GGGVVL 142 (302)
T ss_dssp SSCEETTTTEEC---CCTTCTTCCHHHHHHHHHS--SCEEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSSE-EEEEEE
T ss_pred cccEeCCCCEEEcCCCCCCcCCCChHHHHHHhhC--CCEEEEechHHHHHHHHHhCCCCCCCCEEEEEECCce-eEEEEE
Confidence 9996542 2 2478999999998 89999999999999874 2 45799999999998 668999
Q ss_pred CCceEe-----eCCCCCCcCCC-CchHHHHHHHHHHHHHHHcCCCCCchhHHHHHHHcCCCChhhHHHHhccCCChHHHh
Q 017527 165 DGRDAR-----AAGAGPILGDW-GSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDPSWARIA 238 (370)
Q Consensus 165 dG~l~~-----aGg~G~llgd~-Gs~~~iG~~~~~~~~~~~dg~~~~~~l~~~~~~~~~~~s~~~l~~~~~~~~~~~~~a 238 (370)
||++++ +||+||+..+. |..|.||+.+| +|.+. |...+.++.... ....
T Consensus 143 ~g~l~~G~~g~aGEiGh~~v~~~g~~c~cg~~gc--------------------lE~~~--s~~~l~~~~~~~---~~~~ 197 (302)
T 3vov_A 143 GGRVLRGERGQGGELGHLTLLPGGPACGCGLEGC--------------------LEALA--AGRALERDATYA---FQRP 197 (302)
T ss_dssp TTEECCCTTSCTTCGGGSBSSTTCCBCTTSCBSB--------------------HHHHH--SHHHHHHHHHHH---HTSC
T ss_pred CCEEeeCCCCCCccccceEecCCCCCCCCCCcch--------------------HHHHh--CHHHHHHHHHHh---hCCC
Confidence 999864 78888886543 33333333222 22221 223333321100 0001
Q ss_pred hhHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcc-cCcccccchHHHHHHHHhhC
Q 017527 239 ALVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVL-EANRRWDIGREVVKCILRDY 317 (370)
Q Consensus 239 ~~~~~v~~~A~~GD~~A~~il~~a~~~Lg~~l~~vv~~l~~~~~~~~~P~~VVlgGgv~-~~~~~~~l~~~v~~~l~~~~ 317 (370)
...++|++++++||+.|++++++++++|+..+.++++.|| |+.|||||+++ ...+.| ++.+++.++++.
T Consensus 198 ~~~~~i~~~a~~gd~~a~~~~~~~~~~l~~~i~~l~~~~~--------p~~ivlgG~i~~~~~~~l--~~~l~~~l~~~~ 267 (302)
T 3vov_A 198 VDTRELFRLFQAGDPKAERLVLQAARYVGIGLASLVKAFD--------PGVVVLGGGVALNAPEGY--WEALLEAYRRYL 267 (302)
T ss_dssp CCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHC--------CSEEEEESHHHHTSCHHH--HHHHHHHHHHTT
T ss_pred CCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHC--------CCEEEEeChhHhhhhHHH--HHHHHHHHHHhc
Confidence 2457899999999999999999999999999999999999 79999999999 877766 999999999876
Q ss_pred CCceeeCCCCCccccccccccc-ccccccceeEeeec
Q 017527 318 PGAVPIRPKVCIWPHWHSCDQA-SANCCGAALCRIQL 353 (370)
Q Consensus 318 p~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 353 (370)
+... .|. |..+..++ ++++|||++++.++
T Consensus 268 ~~~~--~~~-----i~~s~lg~~a~~~GAa~l~~~~~ 297 (302)
T 3vov_A 268 QGWE--APP-----LRRARLGAEAGLLGAALTAYLEV 297 (302)
T ss_dssp TTSC--CCC-----EEECSSGGGHHHHHHHHHHHHHH
T ss_pred chhc--CCc-----EEEcCCCCcHHHHHHHHHHHHHh
Confidence 4321 121 55666655 77899999885444
No 14
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=100.00 E-value=1.3e-34 Score=290.65 Aligned_cols=286 Identities=14% Similarity=0.112 Sum_probs=213.0
Q ss_pred CcEEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEEEEecCCCccccCHHHHHHHHHHHHHHHHHHcCCCccCcceEEE
Q 017527 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCL 100 (370)
Q Consensus 21 ~~~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~~~~~~~n~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~v~~IgI 100 (370)
..|+||||+|+|+++++++|. +|+++.+.+.+++. .+++++++.+.+.+++++++.+.++.++.+|||
T Consensus 107 ~~~~lGIDiGgt~i~~~l~d~---------~G~il~~~~~~~~~---~~~~~~~~~l~~~i~~~~~~~~~~~~~i~gigi 174 (429)
T 1z05_A 107 GWQFLSMRLGRGYLTIALHEL---------GGEVLIDTKIDIHE---IDQDDVLARLLFEIEEFFQTYAAQLDRVTSIAI 174 (429)
T ss_dssp TEEEEEEEEETTEEEEEEEET---------TSCEEEEEEEECCC---CBHHHHHHHHHHHHHHHHHHTTTTCCEEEEEEE
T ss_pred CCEEEEEEECCCEEEEEEECC---------CCCEEEEEEEcCCC---CCHHHHHHHHHHHHHHHHHhcCCCcCceEEEEE
Confidence 468999999999999999999 89999988776643 258999999999999999988877778999999
Q ss_pred eecCCCChh-----------h-HHHHHHHHHhhCCCCceEEEeChHHHHHHhhc-C----CCCCeEEEEEcccceeeeec
Q 017527 101 AVSGVNHPT-----------D-QQRILNWLRDIFPGNVRLYVHNDALAALASGT-M----GKLHGCVLIAGTGTIAYGFT 163 (370)
Q Consensus 101 gvpG~~~~~-----------~-~~~l~~~L~~~f~~~~pV~V~NDa~aa~~g~~-~----g~~~~v~l~~GTGi~g~gii 163 (370)
|+||++++. | ..+|++.|+++|+ +||+|+||+|++++++. + +.++++++++|||+ |+|++
T Consensus 175 ~~pG~vd~~~g~v~~~~~l~w~~~~l~~~L~~~~~--~pV~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtGi-G~giv 251 (429)
T 1z05_A 175 TLPGLVNSEQGIVLQMPHYNVKNLALGPEIYKATG--LPVFVANDTRAWALAEKLFGHSQDVDNSVLISIHHGL-GAGIV 251 (429)
T ss_dssp EESSEEETTTTEEEECSSSBCSSBCHHHHHHHHHC--SCEEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSSE-EEEEE
T ss_pred eccCcEeCCCCeEeecCCCCCCCCCHHHHHHHHhC--CCEEEechhHHHHHHHHHhCCCCCCCcEEEEEECCcE-EEEEE
Confidence 999996543 1 2489999999998 89999999999999874 3 45799999999998 67899
Q ss_pred cCCceEe-----eCCCCCCcCCC-CchHHHHHHHHHHHHHHHcCCCCCchhHHHHHHHcCCCChhhHHHHhccCCChHHH
Q 017527 164 EDGRDAR-----AAGAGPILGDW-GSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDPSWARI 237 (370)
Q Consensus 164 ~dG~l~~-----aGg~G~llgd~-Gs~~~iG~~~~~~~~~~~dg~~~~~~l~~~~~~~~~~~s~~~l~~~~~~~~~~~~~ 237 (370)
.||++++ +|||||+..++ |..|.||+.+|.+.+. +...+.+.+.+.+.......+ + .. .
T Consensus 252 ~~G~l~~G~~g~AGEiGH~~v~~~g~~c~cG~~gclE~~~------S~~al~~~~~~~~~~~~~~~l----~-~~---~- 316 (429)
T 1z05_A 252 LDGRVLQGRHGNIGELGHIQIDPQGKRCHCGNYGCLETVA------SSQAIRDQVTARIQAGEPSCL----A-TV---E- 316 (429)
T ss_dssp ETTEECCTTTTCTTBCTTSBCCTTCCBCTTSCBSBTHHHH------SHHHHHHHHHHHHHTTCCCTT----T-TC---S-
T ss_pred ECCEEeeCCCCcccccCceEEcCCCCCCCCCCCcchHHHh------CHHHHHHHHHHHhhccccccc----c-cc---c-
Confidence 9999865 89999998865 4456666544332211 111222222111100000000 0 00 0
Q ss_pred hhhHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHHHHHhhC
Q 017527 238 AALVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDY 317 (370)
Q Consensus 238 a~~~~~v~~~A~~GD~~A~~il~~a~~~Lg~~l~~vv~~l~~~~~~~~~P~~VVlgGgv~~~~~~~~l~~~v~~~l~~~~ 317 (370)
....++|+++|++||+.|++++++++++||.++++++++|| |+.|||||+++...+.| ++.+++.++++.
T Consensus 317 ~~~~~~i~~~a~~gD~~a~~il~~~~~~L~~~i~~l~~~ld--------P~~IvlgG~i~~~~~~l--~~~l~~~l~~~~ 386 (429)
T 1z05_A 317 EISIEDICAAAADGDPLAVDVIQQLGRYLGAAIAIVINLFN--------PEKILIGGVINQAKSIL--YPSIEQCIREQS 386 (429)
T ss_dssp SCCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHC--------CSEEEEESGGGGGHHHH--HHHHHHHHHHHS
T ss_pred CCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHhcC--------CCEEEEeCccccchHHH--HHHHHHHHHHhc
Confidence 12457899999999999999999999999999999999999 79999999999877776 899999998863
Q ss_pred CCceeeCCCCCcccccccccccccccccceeEee
Q 017527 318 PGAVPIRPKVCIWPHWHSCDQASANCCGAALCRI 351 (370)
Q Consensus 318 p~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (370)
.... .....|..+..++.+++|||++++.
T Consensus 387 ~~~~-----~~~~~I~~s~l~~~~~~GAa~l~~~ 415 (429)
T 1z05_A 387 LPVY-----HQDLKLVESRFYKQATMPGAALIKQ 415 (429)
T ss_dssp CHHH-----HTTCEEEECSCSSCTTHHHHHHHHH
T ss_pred cccc-----CCCcEEEEecCCCccHHHHHHHHHH
Confidence 2111 1123344444332258999988743
No 15
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=100.00 E-value=3.7e-35 Score=278.91 Aligned_cols=261 Identities=16% Similarity=0.090 Sum_probs=198.5
Q ss_pred EEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEEEEecCCCccccCHHHHHHHHHHHHHHHHHHcCCCccCcceEEEee
Q 017527 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAV 102 (370)
Q Consensus 23 ~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~~~~~~~n~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~v~~IgIgv 102 (370)
++||||+|+|+++++++|. +|+++.+.+.++++. .+++++++.|.+.+++++. ++.+||||+
T Consensus 2 ~~lgidiggt~~~~~l~d~---------~g~il~~~~~~~~~~--~~~~~~~~~i~~~i~~~~~-------~~~~igi~~ 63 (289)
T 2aa4_A 2 TTLAIDIGGTKLAAALIGA---------DGQIRDRRELPTPAS--QTPEALRDALSALVSPLQA-------HAQRVAIAS 63 (289)
T ss_dssp CEEEEEECSSEEEEEEECT---------TCCEEEEEEEECCSS--CCHHHHHHHHHHHHTTTGG-------GCSEEEEEE
T ss_pred eEEEEEeCCCEEEEEEECC---------CCCEEEEEEecCCCC--CCHHHHHHHHHHHHHHHHh-------hCCEEEEEe
Confidence 6899999999999999998 899999988777543 2688899998888887654 245899999
Q ss_pred cCCCChh------------hH-HHHHHHHHhhCCCCceEEEeChHHHHHHhhc-CCCC---CeEEEEEcccceeeeeccC
Q 017527 103 SGVNHPT------------DQ-QRILNWLRDIFPGNVRLYVHNDALAALASGT-MGKL---HGCVLIAGTGTIAYGFTED 165 (370)
Q Consensus 103 pG~~~~~------------~~-~~l~~~L~~~f~~~~pV~V~NDa~aa~~g~~-~g~~---~~v~l~~GTGi~g~gii~d 165 (370)
||++++. |. .+|++.|+++|+ .||+|+||+|++++++. +|.. +++++++|||+ |+|++.|
T Consensus 64 pG~vd~~~g~v~~~~~~~~w~~~~l~~~l~~~~~--~pv~v~NDa~aaa~~e~~~g~~~~~~~v~l~~GtGi-G~gii~~ 140 (289)
T 2aa4_A 64 TGIIRDGSLLALNPHNLGGLLHFPLVKTLEQLTN--LPTIAINDAQAAAWAEFQALDGDITDMVFITVSTGV-GGGVVSG 140 (289)
T ss_dssp SSEEETTEEECSSGGGGGGGTTCCHHHHHHHHHC--SCEEEEEHHHHHHHHHHHTSCTTCCCEEEEEESSSE-EEEEEET
T ss_pred ccceeCCCCEEEeCCCCCcccCCChHHHHHHHHC--CCEEEechHHHHHHHHHHhCCCCCceEEEEEeCccE-EEEEEEC
Confidence 9986532 21 478999999998 89999999999999874 4321 89999999997 7789999
Q ss_pred CceEe-----eCCCCCCcCCCCc-hHHHHHHHHHHHHHHHcCCCCCchhHHHHHHHcCCCChhhHHHHhccCCChHHHhh
Q 017527 166 GRDAR-----AAGAGPILGDWGS-GYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDPSWARIAA 239 (370)
Q Consensus 166 G~l~~-----aGg~G~llgd~Gs-~~~iG~~~~~~~~~~~dg~~~~~~l~~~~~~~~~~~s~~~l~~~~~~~~~~~~~a~ 239 (370)
|++++ +|||||+..|+++ .|+||+.+|. +.+. |...+.++... . . ...
T Consensus 141 G~l~~G~~g~aGE~Gh~~~~~~g~~c~cG~~gcl--------------------e~~~--s~~~l~~~~~~-~--~-~~~ 194 (289)
T 2aa4_A 141 CKLLTGPGGLAGHIGHTLADPHGPVCGCGRTGCV--------------------EAIA--SGRGIAAAAQG-E--L-AGA 194 (289)
T ss_dssp TEEECCTTSCCCCGGGSBSCTTSCBCTTSCBSBH--------------------HHHH--SHHHHHHTCCG-G--G-TTC
T ss_pred CEEeeCCCCCCccCCcEEECCCCCcCCCCCchhH--------------------HHHh--CHHHHHHHHHH-h--c-cCC
Confidence 99975 9999999987654 3455543322 1121 22233322110 0 0 013
Q ss_pred hHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHHHHHhhCCC
Q 017527 240 LVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPG 319 (370)
Q Consensus 240 ~~~~v~~~A~~GD~~A~~il~~a~~~Lg~~l~~vv~~l~~~~~~~~~P~~VVlgGgv~~~~~~~~l~~~v~~~l~~~~p~ 319 (370)
..+++++++++||+.|++++++++++|+..+.+++++|| |+.|||||+++ ..+.| ++.+++.++++.+
T Consensus 195 ~~~~v~~~a~~gd~~a~~i~~~~~~~L~~~i~~l~~~l~--------p~~ivlgG~~~-~~~~~--~~~l~~~l~~~~~- 262 (289)
T 2aa4_A 195 DAKTIFTRAGQGDEQAQQLIHRSARTLARLIADIKATTD--------CQCVVVGGSVG-LAEGY--LALVETYLAQEPA- 262 (289)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHC--------CSEEEEEHHHH-TSTTH--HHHHHHHHTTSCG-
T ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHhcC--------CCEEEEeCccc-ccHHH--HHHHHHHHHHhcC-
Confidence 467899999999999999999999999999999999999 79999999999 55565 8999999987421
Q ss_pred ceeeCCCCCccccccccccc-ccccccceeE
Q 017527 320 AVPIRPKVCIWPHWHSCDQA-SANCCGAALC 349 (370)
Q Consensus 320 ~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~ 349 (370)
. ....+..+..++ ++++|||+++
T Consensus 263 ~-------~~~~i~~~~~~~~a~~~GAa~l~ 286 (289)
T 2aa4_A 263 A-------FHVDLLAAHYRHDAGLLGAALLA 286 (289)
T ss_dssp G-------GCCEEEECSCSSCHHHHHHHHHH
T ss_pred c-------cCCEEEECCCCCchHHHHHHHHH
Confidence 1 123444555544 6789998875
No 16
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=100.00 E-value=3.1e-34 Score=276.36 Aligned_cols=272 Identities=13% Similarity=0.101 Sum_probs=187.8
Q ss_pred CcEEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEEEEecCCCccccCHHHHHHHHHHHHHHHHHHcCCCccCcceEEE
Q 017527 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCL 100 (370)
Q Consensus 21 ~~~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~~~~~~~n~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~v~~IgI 100 (370)
..|+||||+|+|+++++++|. +|+++.+.+.++++. .++.+++.+.+.+++++++.+ .++.+|||
T Consensus 6 ~~~~lgiDiGgt~i~~~l~d~---------~G~il~~~~~~~~~~---~~~~~~~~i~~~i~~~~~~~~---~~i~gigi 70 (310)
T 3htv_A 6 HNVVAGVDMGATHIRFCLRTA---------EGETLHCEKKRTAEV---IAPGLVSGIGEMIDEQLRRFN---ARCHGLVM 70 (310)
T ss_dssp EEEEEEEEECSSEEEEEEEET---------TSCEEEEEEEEHHHH---HTTCHHHHHHHHHHHHHHHHT---EEEEEEEE
T ss_pred CCEEEEEEeCCCEEEEEEECC---------CCCEEEEEEecCccc---cHHHHHHHHHHHHHHHHHhcC---CCeeEEEE
Confidence 359999999999999999999 899998877654321 245678888888888876654 25899999
Q ss_pred eecCCCChh-----------h-H---HHHHHHHHhhCCCCceEEEeChHHHHHHhhc----CCCCCeEEEEEcccceeee
Q 017527 101 AVSGVNHPT-----------D-Q---QRILNWLRDIFPGNVRLYVHNDALAALASGT----MGKLHGCVLIAGTGTIAYG 161 (370)
Q Consensus 101 gvpG~~~~~-----------~-~---~~l~~~L~~~f~~~~pV~V~NDa~aa~~g~~----~g~~~~v~l~~GTGi~g~g 161 (370)
|+||+++++ | . .+|++.|+++|+ +||+|+||+|++++++. .+..+++++++|||+ |+|
T Consensus 71 ~~pG~vd~~~g~v~~~~~l~~~~~~~~~l~~~l~~~~~--~pv~v~NDanaaa~~e~~~~~~~~~~~~~v~~GtGi-G~g 147 (310)
T 3htv_A 71 GFPALVSKDKRTIISTPNLPLTAADLYDLADKLENTLN--CPVEFSRDVNLQLSWDVVENRLTQQLVLAAYLGTGM-GFA 147 (310)
T ss_dssp EESSCBCTTSSCBCSCCSSSCCHHHHTTHHHHHHHHHT--SCEEEEEHHHHHHHHHHHHTTCTTSCEEEEEESSSE-EEE
T ss_pred eccccEeCCCCEEEeCCCCCCccccCccHHHHHHHHhC--CCEEEeeHHHHHHHHHHhhcccCCceEEEEEeceeE-EEE
Confidence 999997642 1 1 478999999998 89999999999887652 345789999999998 668
Q ss_pred eccCCceEe-----eCCCCCCcCCC-CchHHHHHHHHHHHHHHHcCCCCCchhHHHHHHHcCCCChhhHHHHhccCCChH
Q 017527 162 FTEDGRDAR-----AAGAGPILGDW-GSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDPSWA 235 (370)
Q Consensus 162 ii~dG~l~~-----aGg~G~llgd~-Gs~~~iG~~~~~~~~~~~dg~~~~~~l~~~~~~~~~~~s~~~l~~~~~~~~~~~ 235 (370)
++.||++++ +||+||+..+. |..|.||+.+| +|.|. |...+.++......
T Consensus 148 ii~~G~l~~G~~g~aGEiGh~~v~~~g~~C~cG~~Gc--------------------lE~~~--S~~al~~~~~~~~~-- 203 (310)
T 3htv_A 148 VWMNGAPWTGAHGVAGELGHIPLGDMTQHCACGNPGC--------------------LETNC--SGMALRRWYEQQPR-- 203 (310)
T ss_dssp EEETTEEECCSSSCCCC-----------------------------------------CCSS--SHHHHHHHHTTSCC--
T ss_pred EEECCEEeecCCCCceeCcceEeCCCCCcCCCCCCce--------------------ehhhh--CHHHHHHHHHhccC--
Confidence 999999975 78888876543 34555665544 22222 33333332211000
Q ss_pred HHhhhHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHHHHHh
Q 017527 236 RIAALVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILR 315 (370)
Q Consensus 236 ~~a~~~~~v~~~A~~GD~~A~~il~~a~~~Lg~~l~~vv~~l~~~~~~~~~P~~VVlgGgv~~~~~~~~l~~~v~~~l~~ 315 (370)
....+++++++ +||+.+.++++++ +..+++++++|| |+.|||||+++...+.+ .+.+++.+++
T Consensus 204 --~~~~~~~~~~~-~~d~~~~~~~~~~----a~~la~l~~~~d--------P~~IvlgG~v~~~~~~~--~~~l~~~l~~ 266 (310)
T 3htv_A 204 --NYPLRDLFVHA-ENAPFVQSLLENA----ARAIATSINLFD--------PDAVILGGGVMDMPAFP--RETLVAMTQK 266 (310)
T ss_dssp --SSCGGGHHHHH-TTCHHHHHHHHHH----HHHHHHHHHHHC--------CSEEEEECTTTTSTTCC--HHHHHHHHHH
T ss_pred --CCCHHHHHHHH-cCChHHHHHHHHH----HHHHHHHHHhhC--------CCEEEEeCchhccchhH--HHHHHHHHHH
Confidence 01234567766 5899988888765 556788899999 79999999999988776 8999999998
Q ss_pred hCCCceeeCCCCCccccccccccc-ccccccceeEeeeccc
Q 017527 316 DYPGAVPIRPKVCIWPHWHSCDQA-SANCCGAALCRIQLYP 355 (370)
Q Consensus 316 ~~p~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 355 (370)
+...+. .....+|..+.+++ ++++|||+|++.++..
T Consensus 267 ~~~~~~----~~~~~~i~~s~lg~~ag~~GAa~la~~~~~~ 303 (310)
T 3htv_A 267 YLRRPL----PHQVVRFIAASSSDFNGAQGAAILAHQRFLP 303 (310)
T ss_dssp TSCTTT----TTTTCEEEECCCCTTHHHHHHHHHHHHHHCC
T ss_pred Hhhccc----ccCCcEEEEcCCCCcHHHHHHHHHHHHHhhc
Confidence 763221 23456777777766 7889999998655443
No 17
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=100.00 E-value=8.6e-35 Score=289.61 Aligned_cols=281 Identities=11% Similarity=0.035 Sum_probs=209.9
Q ss_pred CcEEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEEEEecCCCccccCHHHHHHHHHHHHHHHHHHcCCCccCcceEEE
Q 017527 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCL 100 (370)
Q Consensus 21 ~~~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~~~~~~~n~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~v~~IgI 100 (370)
..|+||||+|+|+++++++|. +|+++.+.+.+++. .+++++++.+.+++++++++.+.++.++.+|||
T Consensus 84 ~~~~lgiDiG~t~i~~~l~d~---------~G~il~~~~~~~~~---~~~~~~~~~l~~~i~~~~~~~~~~~~~i~gigi 151 (406)
T 1z6r_A 84 AWHYLSLRISRGEIFLALRDL---------SSKLVVEESQELAL---KDDLPLLDRIISHIDQFFIRHQKKLERLTSIAI 151 (406)
T ss_dssp TCEEEEEEEETTEEEEEEEET---------TCCEEEEEEEECCS---SCSSCHHHHHHHHHHHHHHHTGGGCCCEEEEEE
T ss_pred ccEEEEEEEcCCEEEEEEEcC---------CCCEEEEEEecCCC---CCHHHHHHHHHHHHHHHHHhcCCCcCceeEEEE
Confidence 468999999999999999999 89999988776632 357888999999999999887766678999999
Q ss_pred eecCCCChh------------hH-HHHHHHHHhhCCCCceEEEeChHHHHHHhhc-C----CCCCeEEEEEcccceeeee
Q 017527 101 AVSGVNHPT------------DQ-QRILNWLRDIFPGNVRLYVHNDALAALASGT-M----GKLHGCVLIAGTGTIAYGF 162 (370)
Q Consensus 101 gvpG~~~~~------------~~-~~l~~~L~~~f~~~~pV~V~NDa~aa~~g~~-~----g~~~~v~l~~GTGi~g~gi 162 (370)
++||++++. |. .+|++.|++.|+ +||+|+||+|++++++. + +.++++++++|||+ |+|+
T Consensus 152 ~~pG~vd~~~g~v~~~~~l~~w~~~~l~~~l~~~~~--~pv~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtGi-G~gi 228 (406)
T 1z6r_A 152 TLPGIIDTENGIVHRMPFYEDVKEMPLGEALEQHTG--VPVYIQHDISAWTMAEALFGASRGARDVIQVVIDHNV-GAGV 228 (406)
T ss_dssp EESSEEETTTTEEEECTTCTTCSSBCHHHHHHHHHS--SCEEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSSE-EEEE
T ss_pred EeecCEeCCCCEEecCCCCCCccCCCHHHHHHHHHC--CCEEEechhHHHHHHHHHhcCCCCCCcEEEEEECCcE-EEEE
Confidence 999986532 22 479999999998 89999999999999874 3 45789999999998 6789
Q ss_pred ccCCceEe-----eCCCCCCcCCC-CchHHHHHHHHHHHHHHHcCCCCCchhHHHHHHHcCCCChhhHHHHhccCCChHH
Q 017527 163 TEDGRDAR-----AAGAGPILGDW-GSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDPSWAR 236 (370)
Q Consensus 163 i~dG~l~~-----aGg~G~llgd~-Gs~~~iG~~~~~~~~~~~dg~~~~~~l~~~~~~~~~~~s~~~l~~~~~~~~~~~~ 236 (370)
+.||++++ +|||||+..+. |..|+||..+|.+.+. +...+.+.+.+... ...... +.. .
T Consensus 229 v~~G~l~~G~~g~AGEiGh~~v~~~g~~c~cG~~gclE~~~------S~~al~~~~~~~~~-~~~~~~----~~~----~ 293 (406)
T 1z6r_A 229 ITDGHLLHAGSSSLVEIGHTQVDPYGKRCYCGNHGCLETIA------SVDSILELAQLRLN-QSMSSM----LHG----Q 293 (406)
T ss_dssp EETTEETTTTSSCCBCGGGSBSCTTSCBCTTSCBSBTHHHH------SHHHHHHHHHHHHT-TCTTCG----GGS----S
T ss_pred EECCEEeecCCCcCccCCceEecCCCCCCCCCCccchHHHc------CHHHHHHHHHHhhh-cccccc----cCc----c
Confidence 99999864 89999998865 4556666544432211 11122222211100 000000 000 0
Q ss_pred HhhhHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHHHHHhh
Q 017527 237 IAALVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRD 316 (370)
Q Consensus 237 ~a~~~~~v~~~A~~GD~~A~~il~~a~~~Lg~~l~~vv~~l~~~~~~~~~P~~VVlgGgv~~~~~~~~l~~~v~~~l~~~ 316 (370)
....++|+++|++||+.|.+++++++++|+..+++++++|| |+.|||||+++...+.| ++.+++.++++
T Consensus 294 -~~~~~~v~~~a~~gD~~a~~~l~~~~~~L~~~i~~l~~~ld--------P~~IvlgG~i~~~~~~l--~~~i~~~l~~~ 362 (406)
T 1z6r_A 294 -PLTVDSLCQAALRGDLLAKDIITGVGAHVGRILAIMVNLFN--------PQKILIGSPLSKAADIL--FPVISDSIRQQ 362 (406)
T ss_dssp -CCCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHC--------CSEEEEESGGGGGHHHH--HHHHHHHHHHH
T ss_pred -cCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHhcC--------CCEEEEeCccchhhHHH--HHHHHHHHHHh
Confidence 12457899999999999999999999999999999999999 79999999999887666 89999999886
Q ss_pred CCCceeeCCCCCccccccccccc-ccccccce
Q 017527 317 YPGAVPIRPKVCIWPHWHSCDQA-SANCCGAA 347 (370)
Q Consensus 317 ~p~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~ 347 (370)
.... ......+..+..++ ++++|||.
T Consensus 363 ~~~~-----~~~~~~i~~s~l~~~a~~~GAa~ 389 (406)
T 1z6r_A 363 ALPA-----YSQHISVESTQFSNQGTMAGAAL 389 (406)
T ss_dssp SCHH-----HHTTCEEEECSCCCCTTTTHHHH
T ss_pred cccc-----cCCCcEEEEeCCCChHHHHHHHH
Confidence 4211 11234555555544 67899953
No 18
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=100.00 E-value=2.1e-34 Score=278.67 Aligned_cols=278 Identities=14% Similarity=0.069 Sum_probs=204.6
Q ss_pred cEEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEEEEecCCCccccCHHHHHHHHHHHHHHHHHHcCCCccCcceEEEe
Q 017527 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLA 101 (370)
Q Consensus 22 ~~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~~~~~~~n~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~v~~IgIg 101 (370)
.++||||+|+|+++++++|. +|+++.+.+.++++. +.+++++.|.+.++++..+.+ .+.+||||
T Consensus 24 ~~~lgiDiGgt~i~~~l~d~---------~g~il~~~~~~~~~~---~~~~~~~~i~~~i~~~~~~~~----~i~~igi~ 87 (327)
T 2ap1_A 24 AMYYGFDIGGTKIALGVFDS---------TRRLQWEKRVPTPHT---SYSAFLDAVCELVEEADQRFG----VKGSVGIG 87 (327)
T ss_dssp CEEEEEEECSSEEEEEEEET---------TCCEEEEEEEECCCS---CHHHHHHHHHHHHHHHHHHHT----SCCEEEEE
T ss_pred ceEEEEEECCCEEEEEEEeC---------CCCEEEEEEecCCCC---CHHHHHHHHHHHHHHHHHhcC----CccEEEEE
Confidence 48999999999999999999 899999888776542 578899999999998876543 47899999
Q ss_pred ecCCCChhh------------HHHHHHHHHhhCCCCceEEEeChHHHHHHhhc-CC----CCCeEEEEEcccceeeeecc
Q 017527 102 VSGVNHPTD------------QQRILNWLRDIFPGNVRLYVHNDALAALASGT-MG----KLHGCVLIAGTGTIAYGFTE 164 (370)
Q Consensus 102 vpG~~~~~~------------~~~l~~~L~~~f~~~~pV~V~NDa~aa~~g~~-~g----~~~~v~l~~GTGi~g~gii~ 164 (370)
+||++++.. ..+|++.|++.|+ +||+|+||+|++++++. +| .++++++++|||+ |+|++.
T Consensus 88 ~pG~vd~~~g~v~~~~~~~~~~~~l~~~l~~~~~--~pv~v~NDa~aaalgE~~~g~~~~~~~~v~l~~GtGi-G~giv~ 164 (327)
T 2ap1_A 88 IPGMPETEDGTLYAANVPAASGKPLRADLSARLD--RDVRLDNDANCFALSEAWDDEFTQYPLVMGLILGTGV-GGGLVL 164 (327)
T ss_dssp ESSBSCCTTSCCBCTTCTTTTTSCHHHHHHHHHT--SCEEEEEHHHHHHHHHHTSTTGGGCSEEEEEEESSSE-EEEEEE
T ss_pred eeeeEECCCCEEEccCCCccCCCChHHHHHHHHC--CCEEEecHHHHHHHHHHHhCcCCCCCcEEEEEECCcE-EEEEEE
Confidence 999976421 2478999999998 89999999999999874 43 4789999999998 678999
Q ss_pred CCceEe-----eCCCCCCcCCCCchHHHHHHHHHHHHHHHcCCCCCchhHHHHHHHcCCCChhhHHHHhccCCChHHHhh
Q 017527 165 DGRDAR-----AAGAGPILGDWGSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDPSWARIAA 239 (370)
Q Consensus 165 dG~l~~-----aGg~G~llgd~Gs~~~iG~~~~~~~~~~~dg~~~~~~l~~~~~~~~~~~s~~~l~~~~~~~~~~~~~a~ 239 (370)
||++++ +|||||+..+.++.++.+.. ..+..|.|.-.. +++.+. |...+.++...... . ..
T Consensus 165 ~G~l~~G~~g~aGE~Gh~~~~~~~~~~~~~~--------~~g~~c~cG~~g-cle~~~--s~~~l~~~~~~~~~--~-~~ 230 (327)
T 2ap1_A 165 NGKPITGQSYITGEFGHMRLPVDALTLMGFD--------FPLRRCGCGQMG-CIENYL--SGRGFAWLYQHYYD--Q-SL 230 (327)
T ss_dssp TTEEECCTTSCTTCGGGSBCCHHHHHHHCTT--------SCCCBCTTSCBS-BTHHHH--SHHHHHHHHHHHHC--C-CC
T ss_pred CCEEeecCCCcccccccEEEecCcccccccc--------cCCCcCCCCchh-hHHHHh--CHHHHHHHHHHhcC--C-CC
Confidence 999875 89999988776543321110 012222222111 122222 33344433210000 0 12
Q ss_pred hHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHHHHHhhCCC
Q 017527 240 LVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPG 319 (370)
Q Consensus 240 ~~~~v~~~A~~GD~~A~~il~~a~~~Lg~~l~~vv~~l~~~~~~~~~P~~VVlgGgv~~~~~~~~l~~~v~~~l~~~~p~ 319 (370)
.+++|+++|++||+.|++++++++++|+..+.+++++|| |+.|||||+++...+ + +.++++.++++.+.
T Consensus 231 ~~~~i~~~a~~gd~~a~~il~~~~~~La~~i~~l~~~l~--------p~~IvlgG~i~~~~~-~--~~~l~~~l~~~~~~ 299 (327)
T 2ap1_A 231 QAPEIIALWEQGDEQAHAHVERYLDLLAVCLGNILTIVD--------PDLLVIGGGLSNFTA-I--TTQLAERLPRHLLP 299 (327)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHC--------CSEEEEESGGGGSTH-H--HHSSGGGSGGGSCT
T ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhC--------CCEEEEeChhhcchh-H--HHHHHHHHHHhhcc
Confidence 468899999999999999999999999999999999999 799999999998753 3 44588877765431
Q ss_pred ceeeCCCCCccccccccccc-ccccccceeE
Q 017527 320 AVPIRPKVCIWPHWHSCDQA-SANCCGAALC 349 (370)
Q Consensus 320 ~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~ 349 (370)
......+..+..++ ++++|||.++
T Consensus 300 ------~~~~~~i~~s~~~~~a~~~GAa~la 324 (327)
T 2ap1_A 300 ------VARAPRIERARHGDAGGMRGAAFLH 324 (327)
T ss_dssp ------TCCCCEEEECSCTTTHHHHHHHHTT
T ss_pred ------ccCCCEEEEcCCCCcHHHHHHHHHH
Confidence 12345566666554 6789999876
No 19
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=100.00 E-value=4.4e-34 Score=272.00 Aligned_cols=261 Identities=12% Similarity=0.057 Sum_probs=192.2
Q ss_pred EEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEEEEecCCCccccCHHHHHHHHHHHHHHHHHHcCCCccCcceEEEee
Q 017527 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAV 102 (370)
Q Consensus 23 ~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~~~~~~~n~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~v~~IgIgv 102 (370)
++||||+|+|+++++++|. +|+++.+.+.+++ . +++++++.|.+.+++ .++.+||||+
T Consensus 5 ~~lgidiggt~i~~~l~d~---------~g~il~~~~~~~~--~--~~~~~~~~i~~~i~~---------~~i~gigi~~ 62 (292)
T 2gup_A 5 TIATIDIGGTGIKFASLTP---------DGKILDKTSISTP--E--NLEDLLAWLDQRLSE---------QDYSGIAMSV 62 (292)
T ss_dssp CEEEEEEETTEEEEEEECT---------TCCEEEEEEECCC--S--SHHHHHHHHHHHHTT---------SCCSEEEEEE
T ss_pred EEEEEEECCCEEEEEEECC---------CCCEEEEEEEeCC--C--CHHHHHHHHHHHHHh---------CCCcEEEEEe
Confidence 5899999999999999999 8999998887664 2 577777777666654 3688999999
Q ss_pred cCCCChh------------h-HHHHHHHHHhhCCCCceEEEeChHHHHHHhhc---CCCCCeEEEEEcccceeeeeccCC
Q 017527 103 SGVNHPT------------D-QQRILNWLRDIFPGNVRLYVHNDALAALASGT---MGKLHGCVLIAGTGTIAYGFTEDG 166 (370)
Q Consensus 103 pG~~~~~------------~-~~~l~~~L~~~f~~~~pV~V~NDa~aa~~g~~---~g~~~~v~l~~GTGi~g~gii~dG 166 (370)
||++++. | ..+|++.| ++|+ +||+|+||+|++++++. .+.++++++++|||+ |+|++.||
T Consensus 63 pG~vd~~~g~v~~~~~~~~~~~~~l~~~l-~~~~--~pv~v~NDa~aaa~~e~~~~~~~~~~v~l~~GtGi-G~giv~~G 138 (292)
T 2gup_A 63 PGAVNQETGVIDGFSAVPYIHGFSWYEAL-SSYQ--LPVHLENDANCVGLSELLAHPELENAACVVIGTGI-GGAMIING 138 (292)
T ss_dssp SSEECTTTCBEESCCSSGGGSSSBHHHHT-GGGC--CCEEEEEHHHHHHHHHHHHCTTCSSEEEEEESSSE-EEEEEETT
T ss_pred cCcccCCCCEEEecCCCCcccCCCHHHHH-HHcC--CCEEEechHHHHHHHHHHhcCCCCeEEEEEECCce-EEEEEECC
Confidence 9986532 1 24799999 9998 89999999999999875 366899999999998 67899999
Q ss_pred ceEe-----eCCCCCCcCCCCchHHHHHHHHHHHHHHHcCCCCCchhHHHHHHHcCCCChhhHHHHhccCCChHHHhhhH
Q 017527 167 RDAR-----AAGAGPILGDWGSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDPSWARIAALV 241 (370)
Q Consensus 167 ~l~~-----aGg~G~llgd~Gs~~~iG~~~~~~~~~~~dg~~~~~~l~~~~~~~~~~~s~~~l~~~~~~~~~~~~~a~~~ 241 (370)
++++ +|||||+..+.++ + ++ .+ ++.+. |...+.++........ ....
T Consensus 139 ~l~~G~~g~aGEiGh~~~~~~~-~---------------~~---gc-----le~~~--s~~~l~~~~~~~~~~~--~~~~ 190 (292)
T 2gup_A 139 RLHRGRHGLGGEFGYMTTLAPA-E---------------KL---NN-----WSQLA--STGNMVRYVIEKSGHT--DWDG 190 (292)
T ss_dssp EEECCTTSCTTCGGGCBSSCCS-S---------------SC---CB-----HHHHH--SHHHHHHHHHHHHSSC--CCCH
T ss_pred EEEecCCCCCccceeEEeccCC-C---------------CC---Cc-----HHHhc--CHHHHHHHHHHhhCCC--CCCH
Confidence 9975 7889998876532 0 00 01 11221 2233333221000000 1145
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHHHHHhhCCCce
Q 017527 242 PVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAV 321 (370)
Q Consensus 242 ~~v~~~A~~GD~~A~~il~~a~~~Lg~~l~~vv~~l~~~~~~~~~P~~VVlgGgv~~~~~~~~l~~~v~~~l~~~~p~~~ 321 (370)
++++++|++||+.|++++++++++|+..+.++++.|| |+.|||||++.. .+.| ++.+++.++++.+...
T Consensus 191 ~~v~~~a~~gd~~a~~i~~~~~~~L~~~i~~l~~~l~--------p~~IvlgG~i~~-~~~~--~~~l~~~l~~~~~~~~ 259 (292)
T 2gup_A 191 RKIYQEAAAGNILCQEAIERMNRNLAQGLLNIQYLID--------PGVISLGGSISQ-NPDF--IQGVKKAVEDFVDAYE 259 (292)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHC--------CSEEEEESGGGG-CHHH--HHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhC--------CCEEEEeCcccc-chHH--HHHHHHHHHHhhcccc
Confidence 7899999999999999999999999999999999999 799999999974 5555 8999999988643211
Q ss_pred eeCCCCCccccccccccc-ccccccceeEee
Q 017527 322 PIRPKVCIWPHWHSCDQA-SANCCGAALCRI 351 (370)
Q Consensus 322 ~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~ 351 (370)
. .....++..+..++ ++++|||++++.
T Consensus 260 ~---~~~~~~i~~~~~~~~a~~~GAa~~~~~ 287 (292)
T 2gup_A 260 E---YTVAPVIQACTYHADANLYGALVNWLQ 287 (292)
T ss_dssp T---CCSCCCEEECSCSTTHHHHHHHHHHHH
T ss_pred c---ccCCCeEEEcccCChhhHHHHHHHHHH
Confidence 0 00223455555544 678999988743
No 20
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=99.98 E-value=1.2e-32 Score=264.45 Aligned_cols=260 Identities=13% Similarity=0.058 Sum_probs=186.0
Q ss_pred cEEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEEEEecCCCccccCHHHHHHHHHHHHHHHHHHcCCCccCcceEEEe
Q 017527 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLA 101 (370)
Q Consensus 22 ~~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~~~~~~~n~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~v~~IgIg 101 (370)
.|++|||+|||+++++++|. +|+++.+.+.++. +++++++.+.+.+++ .++.+|||+
T Consensus 3 ~~~lgiDiGgt~i~~~l~d~---------~G~il~~~~~~t~-----~~~~~l~~i~~~~~~---------~~i~gigi~ 59 (302)
T 3epq_A 3 AMLGGIEAGGTXFVCAVGRE---------DGTIIDRIEFPTX-----MPDETIEXVIQYFSQ---------FSLQAIGIG 59 (302)
T ss_dssp CCEEEEEECSSEEEEEEECT---------TSCEEEEEEEECC-----CHHHHHHHHHHHHTT---------SCCSEEEEE
T ss_pred cEEEEEEECcceeEEEEEEC---------CCcEEEEEEecCC-----ChHHHHHHHHHHhcc---------CCceEEEEE
Confidence 47999999999999999999 8999998887653 366777766655431 368999999
Q ss_pred ecCCCChh----------------h-HHHHHHHHHhhCCCCceEEEeChHHHHHHhhc-C----CCCCeEEEEEccccee
Q 017527 102 VSGVNHPT----------------D-QQRILNWLRDIFPGNVRLYVHNDALAALASGT-M----GKLHGCVLIAGTGTIA 159 (370)
Q Consensus 102 vpG~~~~~----------------~-~~~l~~~L~~~f~~~~pV~V~NDa~aa~~g~~-~----g~~~~v~l~~GTGi~g 159 (370)
+||+++++ | ..+|++.|+++|+ +||+++||+||++++|. + +.++++++++|||+ |
T Consensus 60 ~pG~vd~~~~~~~~G~i~~~~~~~w~~~~l~~~l~~~~~--~pV~v~NDanaaalaE~~~G~~~~~~~~~~l~~GtGi-G 136 (302)
T 3epq_A 60 SFGPVDNDXTSQTYGTITATPXAGWRHYPFLQTVXNEMX--IPVGFSTDVNAAALGEFLFGEAXGLDSCLYITIGTGI-G 136 (302)
T ss_dssp ECSSEECCTTSTTTTEECCCSSTTTBTCCHHHHHHHHHC--SCEEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSSE-E
T ss_pred eceeeccccccccccEEecCCCCCccCCChHHHHHHHhC--CCEEEechhHHHHHHHHHhCCCCCCCcEEEEEECCce-E
Confidence 99996532 1 2489999999998 89999999999999874 3 45799999999998 6
Q ss_pred eeeccCCceEe---eCCCCCCcCCCCchHHHHHHHHHHHHHHHcCCCCCchhHHHHHHHcCCCChhhHHHHhccCCChHH
Q 017527 160 YGFTEDGRDAR---AAGAGPILGDWGSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDPSWAR 236 (370)
Q Consensus 160 ~gii~dG~l~~---aGg~G~llgd~Gs~~~iG~~~~~~~~~~~dg~~~~~~l~~~~~~~~~~~s~~~l~~~~~~~~~~~~ 236 (370)
+|+++||++++ +||+||+..+.... ++..+.|++.+.++|.|. |...+.++...
T Consensus 137 ~gii~~G~l~~G~~agEiGh~~v~~~~~---------------~~~~~~C~~~~gclE~~~--S~~al~~~~~~------ 193 (302)
T 3epq_A 137 AGAIVEGRLLQGLSHPEMGHIYIRRHPD---------------DVYQGXCPYHGDCFEGLA--SGPAIEARWGX------ 193 (302)
T ss_dssp EEEEETTEECCSSSCCCGGGCCCCCCTT---------------CCCCCSBTTTBSSHHHHH--SHHHHHHHHSS------
T ss_pred EEEEECCEEcccCCCCccceEEEecCCC---------------CCcCcccCCCCcchhhhC--CHHHHHHHhhc------
Confidence 68999999976 78999987653210 111222222212334443 44444443211
Q ss_pred HhhhHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHHHHHhh
Q 017527 237 IAALVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRD 316 (370)
Q Consensus 237 ~a~~~~~v~~~A~~GD~~A~~il~~a~~~Lg~~l~~vv~~l~~~~~~~~~P~~VVlgGgv~~~~~~~~l~~~v~~~l~~~ 316 (370)
...++ +.+.++|++++++||.++++++++|| |+.|||||+++...+ | ++.+++.++++
T Consensus 194 ---~~~~~--------~~~~~~~~~~~~~La~~i~nl~~~ld--------Pe~IviGGgi~~~~~-l--~~~i~~~l~~~ 251 (302)
T 3epq_A 194 ---KAADL--------SDIAQVWELEGYYIAQALAQYILILA--------PXXIILGGGVMQQXQ-V--FSYIYQYVPKI 251 (302)
T ss_dssp ---CGGGG--------TTCHHHHHHHHHHHHHHHHHHHHHTC--------CSCEEEESSGGGCTH-H--HHHHHHHHHHH
T ss_pred ---ccccc--------cchHHHHHHHHHHHHHHHHHHHHHHC--------chhhhcCchhhhhHH-H--HHHHHHHHHHH
Confidence 00111 12467899999999999999999999 799999999998753 5 89999999887
Q ss_pred CCCceeeCCCC-C--ccccccccccc-ccccccceeEeeec
Q 017527 317 YPGAVPIRPKV-C--IWPHWHSCDQA-SANCCGAALCRIQL 353 (370)
Q Consensus 317 ~p~~~~~~p~~-~--~~~~~~~~~~~-~~~~~~~~~~~~~~ 353 (370)
.+... ..|.. + ...|..+..++ ++++|||++++-++
T Consensus 252 ~~~~~-~~~~~~~~~~~~I~~s~lg~~a~l~GAa~l~~~~~ 291 (302)
T 3epq_A 252 MNSYL-DFSELSDDISDYIVPPRLGSNAGIIGTLVLAHQAL 291 (302)
T ss_dssp HTTCS-CCGGGTTTGGGTEECCTTGGGHHHHHHHHHHHHHH
T ss_pred Hhhhc-cCcccccccCceEEECCcCChHHHHHHHHHHHHHH
Confidence 53221 11111 1 23466666665 77899999985444
No 21
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=99.97 E-value=8.6e-32 Score=264.78 Aligned_cols=236 Identities=17% Similarity=0.140 Sum_probs=180.9
Q ss_pred CcEEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEEE-EecCCCccccCHHHHHHHHHH---HHHHHHHHcCCCccCcc
Q 017527 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARA-AAGCSNHNSVGEDAARETIEK---VMADALLKSGSNRSAVR 96 (370)
Q Consensus 21 ~~~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~~-~~~~~n~~~~~~~~~~~~l~~---~i~~~l~~~~~~~~~v~ 96 (370)
..++||||+|+|+++++++|. |+++.+. +.++... +++++++.|.+ .+++++. .++.
T Consensus 8 ~~~~lgiDIGgt~i~~~l~d~----------G~il~~~~~~~~~~~---~~~~~l~~i~~~~~~i~~~~~------~~i~ 68 (366)
T 3mcp_A 8 NRIVMTLDAGGTNFVFSAIQG----------GKEIADPVVLPACAD---CLDKCLGNLVEGFKAIQAGLP------EAPV 68 (366)
T ss_dssp CCEEEEEECSSSEEEEEEEET----------TEECSCCEEEECCTT---CHHHHHHHHHHHHHHHHTTCS------SCCC
T ss_pred CCEEEEEEECcceEEEEEEEC----------CEEEEEEEEEECCCC---CHHHHHHHHHHHHHHHHHHhh------cCCe
Confidence 469999999999999999994 8888776 6665432 68889998888 5555432 5799
Q ss_pred eEEEeecCCCCh------------hhH--HHHHHHHHhhCCCCceEEEeChHHHHHHhhc-CC-----------------
Q 017527 97 AVCLAVSGVNHP------------TDQ--QRILNWLRDIFPGNVRLYVHNDALAALASGT-MG----------------- 144 (370)
Q Consensus 97 ~IgIgvpG~~~~------------~~~--~~l~~~L~~~f~~~~pV~V~NDa~aa~~g~~-~g----------------- 144 (370)
+|||++||++++ .|. .+|++.|+++|+ +||+|+||+||++++|. +|
T Consensus 69 gIGIavPG~Vd~~~G~i~~~~nlp~w~~~~~l~~~L~~~~g--~PV~veNDanaaAlgE~~~G~~p~~~~~l~~~g~~~~ 146 (366)
T 3mcp_A 69 AISFAFPGPADYQAGIIGDLPNFPSFRGGVALGPFLEDIFG--IPVFINNDGSLFAYGEALTGVLPEINRRLREAGSTKR 146 (366)
T ss_dssp EEEEECCSSEETTTTEECCCTTCGGGTTCBCHHHHHHHHHC--SCEEEECHHHHHHHHHHHTSHHHHHHHHHHHTTCCCC
T ss_pred EEEEEecceEeCCCCEEEeCCCcccccCCCCHHHHHHHHHC--CCEEEechhhHHHHHHHHhCCCcccccccccccccCC
Confidence 999999999653 233 478999999998 89999999999999874 45
Q ss_pred CCCeEEEEEcccceeeeeccCCceEe-----eCCCCCCcCCCCchHHHHHHHHHHHHHHHcCCCCCchhHHHHHHHcCCC
Q 017527 145 KLHGCVLIAGTGTIAYGFTEDGRDAR-----AAGAGPILGDWGSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELS 219 (370)
Q Consensus 145 ~~~~v~l~~GTGi~g~gii~dG~l~~-----aGg~G~llgd~Gs~~~iG~~~~~~~~~~~dg~~~~~~l~~~~~~~~~~~ 219 (370)
.++++++++|||+ |+|++.||++++ +||+||+. | .||+.+| +|.+.
T Consensus 147 ~~~~v~l~lGtGI-G~givi~G~l~~G~~g~AGEiGH~~-~-----~CG~~Gc--------------------lE~~~-- 197 (366)
T 3mcp_A 147 YKNLLGVTLGTGF-GAGVVIDGELLRGDNAAGGYVWCLR-N-----KKYPEYI--------------------VEESV-- 197 (366)
T ss_dssp CCEEEEEEESSSE-EEEEEETTEECCCTTSCTTCCTTSB-C-----SSCTTSB--------------------GGGTS--
T ss_pred CCcEEEEEECCcc-eEEEEECCEEecCCCCCCceeeccc-C-----CCCCCcc--------------------eeeee--
Confidence 4789999999998 668999999965 88999987 3 2222221 12221
Q ss_pred ChhhHHHHhccCCChHHHhhhHHHHHHHHh---cCC-HHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcC
Q 017527 220 SPDELIGWTYVDPSWARIAALVPVVVSCAE---AGD-EVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGG 295 (370)
Q Consensus 220 s~~~l~~~~~~~~~~~~~a~~~~~v~~~A~---~GD-~~A~~il~~a~~~Lg~~l~~vv~~l~~~~~~~~~P~~VVlgGg 295 (370)
|...+.+.........+ ....++|+++|+ +|| +.|++++++++++||..++++++++| | .|||||+
T Consensus 198 S~~al~~~~~~~~~~~~-~~~~~~i~~~a~~~~~gD~~~a~~~l~~~~~~Lg~~i~nl~~~ld--------P-~IviGGg 267 (366)
T 3mcp_A 198 SIRAVMRVYAERSGDAG-ARTPKEIFEIAEGIRPGNREAAIAAFEELGEMAGDALASAITLID--------G-LIVIGGG 267 (366)
T ss_dssp SHHHHHHHHHHHSSCCS-CCCHHHHHHHHHTSSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHC--------S-EEEEESG
T ss_pred cHHHHHHHHHHhhCCCC-CCCHHHHHHHHhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHC--------C-EEEEECh
Confidence 22233222110000000 123578899999 999 99999999999999999999999999 9 9999999
Q ss_pred cccCcccccchHHHHHHHHhhCC
Q 017527 296 VLEANRRWDIGREVVKCILRDYP 318 (370)
Q Consensus 296 v~~~~~~~~l~~~v~~~l~~~~p 318 (370)
++...+.| ++.+++.++++..
T Consensus 268 i~~~~~~~--~~~l~~~l~~~~~ 288 (366)
T 3mcp_A 268 LSGASKYI--LPVLLKEMNAQTG 288 (366)
T ss_dssp GGGGHHHH--HHHHHHHHHHHTT
T ss_pred hhhchHHH--HHHHHHHHHHhcc
Confidence 99988776 9999999998763
No 22
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=99.97 E-value=4.5e-32 Score=267.32 Aligned_cols=286 Identities=13% Similarity=-0.015 Sum_probs=200.9
Q ss_pred CcEEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEEEEecCCCccccCHHHHHHHHHHHHHHHHHHcCCCccCcceEEE
Q 017527 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCL 100 (370)
Q Consensus 21 ~~~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~~~~~~~n~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~v~~IgI 100 (370)
+.|+||||+|||+++++++|.. .+++|+++.+.+..++ .+++.+++.|.+.++++.... +.++.+|||
T Consensus 28 ~~~~lgiDiGgt~i~~~l~d~~-----~~~~g~il~~~~~~~~----~~~~~~~~~i~~~i~~~~~~~---~~~i~gigi 95 (373)
T 2q2r_A 28 APLTFVGDVGGTSARMGFVREG-----KNDSVHACVTRYSMKR----KDITEIIEFFNEIIELMPASV---MKRVKAGVI 95 (373)
T ss_dssp SCEEEEEEECSSEEEEEEEEEC-----GGGCEEEEEEEEECTT----CBGGGHHHHHHHHHHHSCHHH---HTTEEEEEE
T ss_pred CCeEEEEEEccccEEEEEEecc-----cCCCccEEEEeeecCC----CCHHHHHHHHHHHHHHHhhcc---cccccEEEE
Confidence 3589999999999999999850 0002888887762222 146778888888887765432 246889999
Q ss_pred eecCCCCh--------hh-H-HHHHHHHHhhCCCCc-eEEEeChHHHHHHh---------------hc-C----------
Q 017527 101 AVSGVNHP--------TD-Q-QRILNWLRDIFPGNV-RLYVHNDALAALAS---------------GT-M---------- 143 (370)
Q Consensus 101 gvpG~~~~--------~~-~-~~l~~~L~~~f~~~~-pV~V~NDa~aa~~g---------------~~-~---------- 143 (370)
|+||++++ .| + .++++.+++.|+ . ||+|+||++|++++ +. +
T Consensus 96 ~~pG~vd~g~v~~~~~~~~~~~~l~~~l~~~~~--~~pv~v~NDa~aaalge~~l~~~~~~~~~~~E~~~~~~~~~~~~~ 173 (373)
T 2q2r_A 96 NVPGPVTGGAVGGPFNNLKGIARLSDYPKALFP--PGHSAILNDLEAGGFGVLAVSDAHVFSEYFGVMWEGTQWRTCEQE 173 (373)
T ss_dssp EESSCEETTTEECCCSSSBSCEEGGGSCTTTSC--TTSEEEEEHHHHHHHHHHHHHHTTCHHHHEEEEECCTTTTTTCSS
T ss_pred EeeccccCCEEeccCCCCCCcCCHHHHHHHhcC--CCCEEEEccHhHHhccccccChhhhccccchhhcccccccccccC
Confidence 99999653 12 2 377888888888 7 99999999999998 44 3
Q ss_pred --C----CCCeEEEEEcccceeeeeccCCceE-----eeCCCCCCcCCCCchHHHHHHHHHHHHHHHcCCCCCchhHHHH
Q 017527 144 --G----KLHGCVLIAGTGTIAYGFTEDGRDA-----RAAGAGPILGDWGSGYGIAAQALTAVIRAYDGRGPDTMLTSNI 212 (370)
Q Consensus 144 --g----~~~~v~l~~GTGi~g~gii~dG~l~-----~aGg~G~llgd~Gs~~~iG~~~~~~~~~~~dg~~~~~~l~~~~ 212 (370)
| .++++++++|||+ |+|++.||+++ .+||+||+..+.++.|+||+..+... ..+ . +
T Consensus 174 ~~g~~~~~~~~~~v~~GTGi-G~gii~~g~l~~G~~~~aGE~Gh~~~~~~~~c~cg~~l~~~~----~~~----g----~ 240 (373)
T 2q2r_A 174 PAGSVIGRGRCLVLAPGTGL-GSSLIYYNPPMNQHIVVPLELGSQTLPMRKDIDYIQTLHAEL----KLF----P----N 240 (373)
T ss_dssp CTTSSCCSSCEEEEEESSSE-EEEEEEECC---CEEEEEECGGGSBCCCSSCHHHHHHHHHHH----TSC----C----B
T ss_pred CCcCcCCCCCEEEEEeCCce-eEEEEecCcccCCCcccccccceeecCCCCCcchhHHHHHHh----hcc----c----c
Confidence 4 3689999999998 66899999874 49999999887765599998654321 111 1 1
Q ss_pred HHHcCCCChhhHHHHhc---cCCChHHHhhhHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCcc
Q 017527 213 LSTLELSSPDELIGWTY---VDPSWARIAALVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFP 289 (370)
Q Consensus 213 ~~~~~~~s~~~l~~~~~---~~~~~~~~a~~~~~v~~~A~~GD~~A~~il~~a~~~Lg~~l~~vv~~l~~~~~~~~~P~~ 289 (370)
+|.+. |...+...+. .... . ...+++|+++|.+||+.|++++++++++|+..+.++++++| |+.
T Consensus 241 lE~~~--S~~~l~~~~~~~~~~~~-~--~~~~~~i~~~a~~gD~~a~~~l~~~~~~L~~~i~~l~~~l~--------p~~ 307 (373)
T 2q2r_A 241 YENMV--SGAGLEFHYRQVVRGSR-P--PCSAGEIAKLASEGDANACKAMKKYHEYLMRVGSEASMALL--------PLT 307 (373)
T ss_dssp HHHHS--SHHHHHHHHHHHHTTSS-C--CCCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHC--------CSE
T ss_pred HhHhc--CHHHHHHHHHHHhcCCC-C--CCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHC--------CCE
Confidence 23332 3333332211 0000 0 12467899999999999999999999999999999999999 799
Q ss_pred EEEEcC-cccCcccccchH--HHHHHHHhhCCCce-eeCCCCCcccccccccc-cccccccceeE
Q 017527 290 LVMVGG-VLEANRRWDIGR--EVVKCILRDYPGAV-PIRPKVCIWPHWHSCDQ-ASANCCGAALC 349 (370)
Q Consensus 290 VVlgGg-v~~~~~~~~l~~--~v~~~l~~~~p~~~-~~~p~~~~~~~~~~~~~-~~~~~~~~~~~ 349 (370)
|||+|| +... +.| ++ .+++.+++++.... ...+..+...+..+..+ +++++|||+++
T Consensus 308 IvlgGG~~~~~-~~~--~~~~~i~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~a~l~GAa~l~ 369 (373)
T 2q2r_A 308 IVLVGDNIVNN-AFF--YRNPQNLKEMHHEALNHEMERFGFQSRVSYLRQKKLLNLNLMGCYRCG 369 (373)
T ss_dssp EEECSHHHHHT-HHH--HHSHHHHHHHHHHHTCSGGGGGTSGGGCEEEEECSCCCHHHHHHHHHH
T ss_pred EEEeCChHhCc-hhh--hcchhHHHHHHHHHhhcccchhhhhcCCcEEEEecCCchhHHHHHHHH
Confidence 999888 6555 665 78 88888887653221 01222345566666544 47899999876
No 23
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=99.97 E-value=7e-31 Score=254.92 Aligned_cols=279 Identities=14% Similarity=0.010 Sum_probs=183.8
Q ss_pred CcEEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEEEEecCCCccccCHHHHHHHHHHHHHHHHHHcCCCccCcceEEE
Q 017527 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCL 100 (370)
Q Consensus 21 ~~~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~~~~~~~n~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~v~~IgI 100 (370)
+.|+||||+|||+++++++|.. +|+++.+.+.++... +.+.+.+++++++.+ .++.+|||
T Consensus 13 ~~~~lgiDiGGT~i~~~l~dl~--------~g~i~~~~~~~~~~~---------~~~~~~i~~~~~~~~---~~i~gigi 72 (332)
T 1sz2_A 13 TKYALVGDVGGTNARLALCDIA--------SGEISQAKTYSGLDY---------PSLEAVIRVYLEEHK---VEVKDGCI 72 (332)
T ss_dssp -CEEEEEEEETTEEEEEEEETT--------TCCEEEEEEEEGGGC---------SCHHHHHHHHHHHSC---CCCCEEEE
T ss_pred CCEEEEEEechhheEEEEEECC--------CCcEEEEEEecCCCc---------CCHHHHHHHHHHhcC---CCccEEEE
Confidence 4599999999999999999941 588887766655322 123344555555543 36889999
Q ss_pred eecCCCChh--------hHHHHHHHHHhhCCCCce-EEEeChHHHHHHhhc-C--------------CCCCeEEEEEccc
Q 017527 101 AVSGVNHPT--------DQQRILNWLRDIFPGNVR-LYVHNDALAALASGT-M--------------GKLHGCVLIAGTG 156 (370)
Q Consensus 101 gvpG~~~~~--------~~~~l~~~L~~~f~~~~p-V~V~NDa~aa~~g~~-~--------------g~~~~v~l~~GTG 156 (370)
|+||++++. |..+ .+.|+++|+ +| |+|+||+||+++++. + +.+++++|++|||
T Consensus 73 ~~pG~vd~~~~~~~nl~w~~~-~~~l~~~~~--~p~V~v~NDanaaalgE~~~~~~~~~~~g~g~~~~~~~~~~v~~GTG 149 (332)
T 1sz2_A 73 AIACPITGDWVAMTNHTWAFS-IAEMKKNLG--FSHLEIINDFTAVSMAIPMLKKEHLIQFGGAEPVEGKPIAVYGAGTG 149 (332)
T ss_dssp EESSCCCSSEECCSSSCCCEE-HHHHHHHHT--CSEEEEEEHHHHHHHHGGGCCGGGEEECSSCCCCTTCCEEEEEESSS
T ss_pred EEeCceeCCEEeeeCCCCcCC-HHHHHHHhC--CCcEEEEeCHhHHhccccccChhhheecCCCCCCCCCcEEEEEcCcc
Confidence 999997642 2235 578999998 87 999999999999884 2 3378999999999
Q ss_pred ceeeeeccCCce---EeeCCCCCCcCCCCchHHHHHHHHHHHHHHHcCCCCCchhHHHHHHHcCCCChhhHHHHhc---c
Q 017527 157 TIAYGFTEDGRD---ARAAGAGPILGDWGSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTY---V 230 (370)
Q Consensus 157 i~g~gii~dG~l---~~aGg~G~llgd~Gs~~~iG~~~~~~~~~~~dg~~~~~~l~~~~~~~~~~~s~~~l~~~~~---~ 230 (370)
+ |+|+++||+. ..+||+||+..+..+..++.. |. ......|+. ++|.|. |...+...+. .
T Consensus 150 i-G~giv~~g~~G~~g~agE~GH~~v~~~~~~~~~l--~~-~~c~~~g~g--------clE~~~--S~~~l~~~~~~~~~ 215 (332)
T 1sz2_A 150 L-GVAHLVHVDKRWVSLPGEGGHVDFAPNSEEEAII--LE-ILRAEIGHV--------SAERVL--SGPGLVNLYRAIVK 215 (332)
T ss_dssp E-EEEEEEEETTEEEEEECCGGGSBCCCCSHHHHHH--HH-HHHHHSSSC--------BGGGTS--SHHHHHHHHHHHHH
T ss_pred c-eEEEEecCCCCeeeCCCCccccCcCCCChHHHHH--HH-HHHhccCCc--------chhhhc--cHHHHHHHHHHHhh
Confidence 8 6678888762 349999998776544321110 00 000011211 122332 3333322211 0
Q ss_pred -CCChHHHhhhHHHHHHHHhcC-CHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCcc-EEEEcCcccCcccccch-
Q 017527 231 -DPSWARIAALVPVVVSCAEAG-DEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFP-LVMVGGVLEANRRWDIG- 306 (370)
Q Consensus 231 -~~~~~~~a~~~~~v~~~A~~G-D~~A~~il~~a~~~Lg~~l~~vv~~l~~~~~~~~~P~~-VVlgGgv~~~~~~~~l~- 306 (370)
.... .....+++|+++|++| |+.|++++++++++||..+++++++|| |+. ||||||++.....+ +.
T Consensus 216 ~~~~~-~~~~~~~~i~~~a~~G~D~~A~~~~~~~~~~Lg~~i~~l~~~l~--------P~~gvvigGGi~~~~~~~-l~~ 285 (332)
T 1sz2_A 216 ADNRL-PENLKPKDITERALADSCTDCRRALSLFCVIMGRFGGNLALNLG--------TFGGVFIAGGIVPRFLEF-FKA 285 (332)
T ss_dssp HTTCC-CCCCCHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHHT--------CTTEEEEECSSSGGGHHH-HHH
T ss_pred ccCCC-ccCCCHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHC--------CCeEEEEEChhhhhHHHH-hcc
Confidence 0000 0012467899999999 999999999999999999999999999 798 99999999764444 24
Q ss_pred HHHHHHHHhhCCCceeeCCCCCcccccccccccccccccceeEe
Q 017527 307 REVVKCILRDYPGAVPIRPKVCIWPHWHSCDQASANCCGAALCR 350 (370)
Q Consensus 307 ~~v~~~l~~~~p~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (370)
+.+++.+++...... ..+...+..+..++++++|||++++
T Consensus 286 ~~~~~~~~~~~~~~~----~~~~~~i~~~~~~~a~l~GAa~l~~ 325 (332)
T 1sz2_A 286 SGFRAAFEDKGRFKE----YVHDIPVYLIVHDNPGLLGSGAHLR 325 (332)
T ss_dssp SSHHHHHHCCGGGHH----HHTTCCEEEECCSCHHHHHHHHHHH
T ss_pred HHHHHHHHhcCchhh----HHhCceEEEEECCchhHHHHHHHHH
Confidence 358888865211111 0112223333344577999998863
No 24
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=99.96 E-value=2.4e-29 Score=248.83 Aligned_cols=270 Identities=15% Similarity=0.104 Sum_probs=195.5
Q ss_pred cEEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEEEEecCCCccccCHHHHHHHH---HHHHHHHHHHcCCCccCcceE
Q 017527 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETI---EKVMADALLKSGSNRSAVRAV 98 (370)
Q Consensus 22 ~~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~~~~~~~n~~~~~~~~~~~~l---~~~i~~~l~~~~~~~~~v~~I 98 (370)
.++||||+|+|+++++++|. + +++.+.+.+++.....+++.+++++ .+.+.+++++.+.+..++.+|
T Consensus 2 ~~vlgidiGgt~ik~al~d~---------~-~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~i~gI 71 (381)
T 1saz_A 2 FRILTINPGSTSTKLSIFED---------E-RMVKMQNFSHSPDELGRFQKILDQLEFREKIARQFVEETGYSLSSFSAF 71 (381)
T ss_dssp CEEEEEEECSSEEEEEEEET---------T-EEEEEEEEECCHHHHHTCSSGGGGHHHHHHHHHHHHHTTTCCGGGCSEE
T ss_pred CeEEEEECCccceeEEEEec---------c-hheeeeecccCcccccchhhHHHHHHHHHHHHHHHHHHcCCCccCceEE
Confidence 37999999999999999998 5 8888877665321000123345555 778888888777666789999
Q ss_pred EEeecCCCChhh--------------------------HHHHHHHHHhhCCCCceEEEeChHH---------HHHH----
Q 017527 99 CLAVSGVNHPTD--------------------------QQRILNWLRDIFPGNVRLYVHNDAL---------AALA---- 139 (370)
Q Consensus 99 gIgvpG~~~~~~--------------------------~~~l~~~L~~~f~~~~pV~V~NDa~---------aa~~---- 139 (370)
|++||++++.. ..++++.|++.|+ +||+|+||+| ++++
T Consensus 72 -i~~pG~vd~~~G~~~~i~~~~~~~l~~~~~~~~~~nl~~~l~~~l~~~~~--~Pv~v~NDan~~~~~~~a~aaalp~~~ 148 (381)
T 1saz_A 72 -VSRGGLLDPIPGGVYLVDGLMIKTLKSGKNGEHASNLGAIIAHRFSSETG--VPAYVVDPVVVDEMEDVARVSGHPNYQ 148 (381)
T ss_dssp -EEECCSCSCBCSSEEECCHHHHHHHHHTTTCCCTTHHHHHHHHHHHHHHC--CCEEEESCTTBCCCCGGGTBCSSTTCB
T ss_pred -EecCCCCCCCCCceEecCHHHHHHHHhcccccChhhhhHHHHHHHHHhcC--CCEEEeCCCccccCcHHHHHcCCcchh
Confidence 99999865321 3578889999998 8999999999 8877
Q ss_pred -------------hh-c-C----CCC--CeEEEEEcccceeeeeccCCceEe-----eCCCCCCcCCCCchHHHHH--HH
Q 017527 140 -------------SG-T-M----GKL--HGCVLIAGTGTIAYGFTEDGRDAR-----AAGAGPILGDWGSGYGIAA--QA 191 (370)
Q Consensus 140 -------------g~-~-~----g~~--~~v~l~~GTGi~g~gii~dG~l~~-----aGg~G~llgd~Gs~~~iG~--~~ 191 (370)
++ . + +.+ +++++++|||+ |+|++.||++++ +|| ||+..+..+.|.||. ..
T Consensus 149 r~~gfhgls~~~~aE~~~~g~~~~~~~~~~v~~~lGtGi-G~g~i~~G~~~~G~~g~agE-Gh~~~~~~g~c~cg~l~~g 226 (381)
T 1saz_A 149 RKSIFHALNQKTVAKEVARMMNKRYEEMNLVVAHMGGGI-SIAAHRKGRVIDVNNALDGD-GPFTPERSGTLPLTQLVDL 226 (381)
T ss_dssp CCCCSCHHHHHHHHHHHHHHTTCCGGGCEEEEEEESSSE-EEEEEETTEEEEECCGGGTC-SSCCSSCCCSCCHHHHHHH
T ss_pred hhcccccccHHHHHHHHHHhcCCCCccCCEEEEEeCCCc-EEEEEECCEEEEecCCCCCC-cceeeccCCCCCCcHHHHH
Confidence 66 3 2 334 89999999998 667889999865 678 999876533366665 33
Q ss_pred HHHHHHHHcCCCCCchhHHHHHHHcCCCChhhHHHHhccCCChHH--HhhhHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Q 017527 192 LTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDPSWAR--IAALVPVVVSCAEAGDEVANKILQDSVEELALS 269 (370)
Q Consensus 192 ~~~~~~~~dg~~~~~~l~~~~~~~~~~~s~~~l~~~~~~~~~~~~--~a~~~~~v~~~A~~GD~~A~~il~~a~~~Lg~~ 269 (370)
|. +... |...+..+......... -....++|+++|++||+.|++++++++++|+..
T Consensus 227 c~------e~~~----------------S~~~l~~~~~~~~g~~~~~~~~~~~~i~~~a~~gd~~a~~~l~~~~~~la~~ 284 (381)
T 1saz_A 227 CF------SGKF----------------TYEEMKKRIVGNGGLVAYLGTSDAREVVRRIKQGDEWAKRVYRAMAYQIAKW 284 (381)
T ss_dssp HT------SSCC----------------CTTGGGSTTTTSCTHHHHHSCCCHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HH------HhCC----------------CHHHHHHHHHhccCccccccCCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 31 2111 22222221111000000 012467899999999999999999999999999
Q ss_pred HHHHHHHh--ccCCCCCCCCccEEEEcCcccCcccccchHHHHHHHHhhCCCceeeCCCCCccccccccccc-ccccccc
Q 017527 270 VKAVVQRL--SLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIRPKVCIWPHWHSCDQA-SANCCGA 346 (370)
Q Consensus 270 l~~vv~~l--~~~~~~~~~P~~VVlgGgv~~~~~~~~l~~~v~~~l~~~~p~~~~~~p~~~~~~~~~~~~~~-~~~~~~~ 346 (370)
+.++++.| | |+.||||||++...+.+ .+.+++.+++..| ..+..++.++ ++++|||
T Consensus 285 i~~l~~~l~~~--------p~~IvlgGgi~~~~~~l--~~~i~~~l~~~~~-----------~~i~~~~~~~~a~~~GAa 343 (381)
T 1saz_A 285 IGKMAAVLKGE--------VDFIVLTGGLAHEKEFL--VPWITKRVSFIAP-----------VLVFPGSNEEKALALSAL 343 (381)
T ss_dssp HHHHHHHTTTC--------CSEEEEEEGGGGCTTTH--HHHHHHHHTTTSC-----------EEEEEBCCHHHHHHHHHH
T ss_pred HHHHHHHhcCC--------CCEEEEeCcCccChHHH--HHHHHHHHHhhcC-----------eEEEecCcchhHHHHHHH
Confidence 99999999 8 79999999999886555 8999999977431 2344455554 6789999
Q ss_pred eeE
Q 017527 347 ALC 349 (370)
Q Consensus 347 ~~~ 349 (370)
+++
T Consensus 344 ~l~ 346 (381)
T 1saz_A 344 RVL 346 (381)
T ss_dssp HHH
T ss_pred HHH
Confidence 886
No 25
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=99.95 E-value=1.8e-28 Score=230.78 Aligned_cols=228 Identities=17% Similarity=0.075 Sum_probs=167.3
Q ss_pred cEEEEEEcCccceEEEEEeCCCCCCCCCCC-CCeEEE-EEecCCCccccCHHHHHHHHHHHHHHHHHHcCCCccCcceEE
Q 017527 22 EVILGLDGGTTSTVCICMPVISMSDSLPDP-LPVLAR-AAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVC 99 (370)
Q Consensus 22 ~~vlGVDiGgT~i~~~l~d~~~~~~~~~~~-g~il~~-~~~~~~n~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~v~~Ig 99 (370)
.|+||||+|+|+++++++|. + |+++.+ .+.+++.. .+++++++.+.+.+++++++... ...+.+||
T Consensus 12 ~~~lgidiggt~i~~~l~dl---------~~g~i~~~~~~~~~~~~--~~~~~~~~~i~~~i~~~~~~~~~-~~~~~~ig 79 (267)
T 1woq_A 12 APLIGIDIGGTGIKGGIVDL---------KKGKLLGERFRVPTPQP--ATPESVAEAVALVVAELSARPEA-PAAGSPVG 79 (267)
T ss_dssp CCEEEEEECSSEEEEEEEET---------TTTEEEEEEEEEECCSS--CCHHHHHHHHHHHHHHHHTSTTC-CCTTCCEE
T ss_pred CEEEEEEECCCEEEEEEEEC---------CCCeEEEEEEecCCCcc--CCHHHHHHHHHHHHHHHHHhccc-cCccceEE
Confidence 37999999999999999998 5 677743 34444322 36889999999999998764431 13456899
Q ss_pred EeecCCCC-------h----hh-HHHHHHHHHhhCCCCceEEEeChHHHHHHhhc-CC----CC-CeEEEEEcccceeee
Q 017527 100 LAVSGVNH-------P----TD-QQRILNWLRDIFPGNVRLYVHNDALAALASGT-MG----KL-HGCVLIAGTGTIAYG 161 (370)
Q Consensus 100 IgvpG~~~-------~----~~-~~~l~~~L~~~f~~~~pV~V~NDa~aa~~g~~-~g----~~-~~v~l~~GTGi~g~g 161 (370)
||+||+++ | .| ..+|++.|+++|+ +||+++||+||++++|. +| .+ +++++++|||+ |+|
T Consensus 80 i~~pG~v~~g~v~~~~~l~~~w~~~~l~~~l~~~~~--~pV~v~NDanaaalaE~~~g~~~~~~~~~~~l~~GtGI-G~g 156 (267)
T 1woq_A 80 VTFPGIIQHGVVHSAANVDKSWLNTDIDALLTARLG--RPVEVINDADAAGLAEARYGAGAGVKGTVLVITLGTGI-GSA 156 (267)
T ss_dssp EEESSCEETTEECCCTTSCGGGTTCBHHHHHHHHHT--SCEEEEEHHHHHHHHHHHHSTTTTCCSEEEEEEESSSE-EEE
T ss_pred EEccceEcCCEEEeCCCCCCCCCCCCHHHHHHHHHC--CCEEEeehhHHHHHHHHHhCCCCCCCCcEEEEEECcce-EEE
Confidence 99999853 1 23 2589999999998 89999999999999874 33 34 47899999997 778
Q ss_pred eccCCceEeeCCCCCCcCCCCchHHHHHHHHHHHHHHHcCCCCCchhHHHHHHHcCCCChhhHHHHhccCCChHHHhhhH
Q 017527 162 FTEDGRDARAAGAGPILGDWGSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDPSWARIAALV 241 (370)
Q Consensus 162 ii~dG~l~~aGg~G~llgd~Gs~~~iG~~~~~~~~~~~dg~~~~~~l~~~~~~~~~~~s~~~l~~~~~~~~~~~~~a~~~ 241 (370)
++.||++++.||+||+..+.. . +|.|. |...+.
T Consensus 157 iv~~G~l~~GgEiGh~~v~~~------------------------~-----lE~~~--S~~~l~---------------- 189 (267)
T 1woq_A 157 FIFDGKLVPNAELGHLEIDGH------------------------D-----AETKA--SAVARE---------------- 189 (267)
T ss_dssp EEETTEEETTCCGGGCEETTE------------------------E-----HHHHH--SHHHHH----------------
T ss_pred EEECCEEccCceeeeEEecCc------------------------c-----HHHHh--CHHHHh----------------
Confidence 999999999999999865421 0 12221 111110
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHHHHHhhCCCce
Q 017527 242 PVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAV 321 (370)
Q Consensus 242 ~~v~~~A~~GD~~A~~il~~a~~~Lg~~l~~vv~~l~~~~~~~~~P~~VVlgGgv~~~~~~~~l~~~v~~~l~~~~p~~~ 321 (370)
+ . ...+++++++|+..+++++++|| |+.|||||+++...+.| ++.++
T Consensus 190 ----~---~-----~~~~~~~~~~l~~~l~~l~~~ld--------P~~IvlgG~i~~~~~~~--~~~~~----------- 236 (267)
T 1woq_A 190 ----R---D-----GLSWDEYSVLLQRYFSHVEFLFS--------PELFIVGGGISKRADEY--LPNLR----------- 236 (267)
T ss_dssp ----H---T-----TCCHHHHHHHHHHHHHHHHHHHC--------CSEEEEESGGGGGGGGT--GGGCC-----------
T ss_pred ----h---c-----chhHHHHHHHHHHHHHHHHHHcC--------CCEEEEeChhhcccHHH--HHhhc-----------
Confidence 0 0 12378899999999999999999 79999999999887665 55443
Q ss_pred eeCCCCCccccccccccc-ccccccceeEe
Q 017527 322 PIRPKVCIWPHWHSCDQA-SANCCGAALCR 350 (370)
Q Consensus 322 ~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~ 350 (370)
....+..+..++ ++++|||+++.
T Consensus 237 ------~~~~i~~s~l~~~a~~~GAa~l~~ 260 (267)
T 1woq_A 237 ------LRTPIVPAVLRNEAGIVGAAIEIA 260 (267)
T ss_dssp ------CSSCEEECSCSTTHHHHHHHHHHH
T ss_pred ------cCceEEECCcCCcHHHHHHHHHHH
Confidence 123455555544 67899998873
No 26
>3lm2_A Putative kinase; structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2, transf; HET: MSE; 1.70A {Agrobacterium tumefaciens}
Probab=99.94 E-value=7.9e-27 Score=214.88 Aligned_cols=195 Identities=12% Similarity=0.017 Sum_probs=142.1
Q ss_pred cCCCcEEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEEEEecCCCccccCHHHHHHHHHHHHHHHHHHcCCCccCcce
Q 017527 18 SGGREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRA 97 (370)
Q Consensus 18 ~~~~~~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~~~~~~~n~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~v~~ 97 (370)
|.++++++|||+|||+++ ++|. +|++. .+.+++.. .+++++++.+.+.+++ . ++.+
T Consensus 2 m~~~~~~lgiDIGGT~i~--~~d~---------~g~~~--~~~~t~~~--~~~~~~~~~i~~~i~~----~-----~i~g 57 (226)
T 3lm2_A 2 MAEDQTVLAIDIGGSHVK--IGLS---------TDGEE--RKVESGKT--MTGPEMVAAVTAMAKD----M-----TYDV 57 (226)
T ss_dssp CGGGCCEEEEEECSSEEE--EEET---------TTCCE--EEEECCTT--CCHHHHHHHHHHHTTT----C-----CCSE
T ss_pred CCcCCEEEEEEECCCEEE--EEEC---------CCCEE--EEEECCCC--CCHHHHHHHHHHHHHh----C-----CCCE
Confidence 445669999999999999 4677 67773 33344322 3677777777665543 1 5889
Q ss_pred EEEeecCCCChh------------h-HHHHHHHHHhhCCCCceEEEeChHHHHHHhhcCCCCCeEEEEEcccceeeeecc
Q 017527 98 VCLAVSGVNHPT------------D-QQRILNWLRDIFPGNVRLYVHNDALAALASGTMGKLHGCVLIAGTGTIAYGFTE 164 (370)
Q Consensus 98 IgIgvpG~~~~~------------~-~~~l~~~L~~~f~~~~pV~V~NDa~aa~~g~~~g~~~~v~l~~GTGi~g~gii~ 164 (370)
||||+||++++. | ..+| +++|+ .||+|+||+||+++++.+. .+++++++|||+ |+|++.
T Consensus 58 igi~~pG~Vd~~~~~~~~~nl~~~w~~~~l----~~~~~--~pv~v~NDanaaalge~~~-~~~~~l~~GtGi-G~gii~ 129 (226)
T 3lm2_A 58 IAMGYPGPVVHNKPLREPVNLGEGWVGYDY----EGAFG--RPVRIVNDALMQAIGSYNG-GRMLFLGLGTGL-GAAMIV 129 (226)
T ss_dssp EEEEESSCEETTEECSCCTTSCSCCTTCCH----HHHHT--SCEEEEEHHHHHHHHHCCS-SEEEEEEESSSE-EEEEEE
T ss_pred EEEEEEeEEECCeEEEECCcCCccccCCch----HHhcC--CeEEEEEHHHHHHHHHhhc-CcEEEEEeCCce-EEEEEE
Confidence 999999996532 1 1234 46777 8999999999999998654 589999999998 668999
Q ss_pred CCceEeeCCCCCCcCCCCchHHHHHHHHHHHHHHHcCCCCCchhHHHHHHHcCCCChhhHHHHhccCCChHHHhhhHHHH
Q 017527 165 DGRDARAAGAGPILGDWGSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDPSWARIAALVPVV 244 (370)
Q Consensus 165 dG~l~~aGg~G~llgd~Gs~~~iG~~~~~~~~~~~dg~~~~~~l~~~~~~~~~~~s~~~l~~~~~~~~~~~~~a~~~~~v 244 (370)
||++++ ||+||+..+.+ .++|.|. |...+.+
T Consensus 130 ~G~l~~-GEiGH~~v~~~----------------------------gclE~~~--s~~al~~------------------ 160 (226)
T 3lm2_A 130 ENVAQP-MEIAHLPYRKG----------------------------KTYEHYV--SEAYREK------------------ 160 (226)
T ss_dssp TTEEEE-ECCTTSEEETT----------------------------EEHHHHT--CHHHHHH------------------
T ss_pred CCEEee-eeeeeEEecCC----------------------------CcHHHHh--CHHHHHH------------------
Confidence 999998 99999865432 0133343 3222211
Q ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHHHHHh
Q 017527 245 VSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILR 315 (370)
Q Consensus 245 ~~~A~~GD~~A~~il~~a~~~Lg~~l~~vv~~l~~~~~~~~~P~~VVlgGgv~~~~~~~~l~~~v~~~l~~ 315 (370)
.+ + ++++++|+.++++++++|| |+.|||||+++...+.| .+.+++.+++
T Consensus 161 --~~---~-------~~~~~~L~~~la~l~~~~d--------P~~IVlGG~~~~~~~~~--~~~i~~~~~~ 209 (226)
T 3lm2_A 161 --KG---N-------AKWQKRVQDVVERLSAALE--------PDEVVIGGGNVERLENL--PPKCRRGDNA 209 (226)
T ss_dssp --HC---H-------HHHHHHHHHHHHHHHHHHC--------CSEEEEESGGGGGCCCC--CTTEEECCTT
T ss_pred --HH---H-------HHHHHHHHHHHHHHHHHHC--------CCEEEEeChhhhhhhHH--HHHHHHHHHH
Confidence 11 1 4677899999999999999 79999999999998876 6666655544
No 27
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=99.91 E-value=2.8e-23 Score=209.24 Aligned_cols=293 Identities=8% Similarity=-0.022 Sum_probs=186.5
Q ss_pred CcEEEEEEcCccceEEEEEeCCCCCCCCCCCCCe---EEEEEecCCCc-cccCHHHHHHHHHHHHHHHHHHcCCCccCcc
Q 017527 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPLPV---LARAAAGCSNH-NSVGEDAARETIEKVMADALLKSGSNRSAVR 96 (370)
Q Consensus 21 ~~~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~i---l~~~~~~~~n~-~~~~~~~~~~~l~~~i~~~l~~~~~~~~~v~ 96 (370)
.+.+||||+|||++|+++++. +|++ +.+.+.+.+.. ...+.+++++.|.++|++++++.+....+..
T Consensus 60 ~G~~laiDlGGTnirv~lV~~---------~G~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~ 130 (457)
T 2yhx_A 60 AGSFLAIVMGGGDLEVILISL---------AGRQESSIXASRSLAAAMSTTAIPSDLWGNXAXSNAAFSSXEFSSXAGSV 130 (457)
T ss_dssp CEEEEEEEECSSEEEEEEEEE---------ETTEEEEEEEEEECCTTTTSCSCTHHHHHHHHHHHHHHHHHHTSSCSSCE
T ss_pred cceEEEEEeCCCeEEEEEEEe---------CCCeeEEEeeEEEEcCCccCCCCHHHHHHHHHHHHHHHHhhccccccccc
Confidence 568899999999999999998 7888 44444444322 2236789999999999999987653323333
Q ss_pred eEEEeecCCCC---h------hh--HH------HHHHHHHhhC---CCCce---EEEeChHHHHHHhhc-CCCCCeEEEE
Q 017527 97 AVCLAVSGVNH---P------TD--QQ------RILNWLRDIF---PGNVR---LYVHNDALAALASGT-MGKLHGCVLI 152 (370)
Q Consensus 97 ~IgIgvpG~~~---~------~~--~~------~l~~~L~~~f---~~~~p---V~V~NDa~aa~~g~~-~g~~~~v~l~ 152 (370)
.+||++|++.+ . .| .+ ++.++|++.+ + .| |.|.||+|++++++. .+.++.+++|
T Consensus 131 ~lGi~fs~P~~q~~~~~g~l~~wtKgf~i~~~~~v~~~L~~~l~r~g--lpv~vval~NDa~~tll~e~~~~~~~~igli 208 (457)
T 2yhx_A 131 PLGFTFXEAGAKEXVIKGQITXQAXAFSLAXLXKLISAMXNAXFPAG--DXXXSVADIXDSHGILXXVNYTDAXIKMGII 208 (457)
T ss_dssp EEEEECCSCCCCSBTTCCBCSSCCTTCCCSSCSSBHHHHHHHHHHHH--CCEEEEEEECHHHHHHHHHHHHCTTEEEEEE
T ss_pred ceeeEEEEEEEEeecCceEEEeeccCCCcchhHHHHHHHHHhHhhcC--CcceeEEEEecchhhccchhhcCCccEEEEE
Confidence 44555555432 1 13 22 7888888887 6 67 999999999999985 5678899999
Q ss_pred EcccceeeeeccCC----ce------------EeeCCCCCCcCCCCchHHHHHHHHHHHHHHHcCCCCCch---------
Q 017527 153 AGTGTIAYGFTEDG----RD------------ARAAGAGPILGDWGSGYGIAAQALTAVIRAYDGRGPDTM--------- 207 (370)
Q Consensus 153 ~GTGi~g~gii~dG----~l------------~~aGg~G~llgd~Gs~~~iG~~~~~~~~~~~dg~~~~~~--------- 207 (370)
+|||++| +++.++ ++ .-++||||+ ++.+.-.- ++..-...|+..+.+.
T Consensus 209 lGTGvgg-~~i~~~~~i~kl~~~~~~~~~g~~~in~EwG~f-~~~~~~lp-----~t~~D~~lD~~s~~pGq~fEkm~SG 281 (457)
T 2yhx_A 209 FGSGVNA-AYWCDSTXIGDAADGGXXGGAGXMXICCDQSSF-RKAFPSLP-----QIXYLXTLNXXSPXAXKTFXKNSXA 281 (457)
T ss_dssp ESSSEEE-EEEECGGGSSCTTSCSSSCSSCCEEEECCCTTT-TTTCSSSC-----CCHHHHHHHHHSSCSCCHHHHHHCG
T ss_pred ECcEEEE-EEEECCCcccccccccccccCCceEEEEEcccC-CCCCCcCC-----ccccccccccccCchHHHHHHHhhh
Confidence 9999955 687877 32 348999998 43221100 0000011111111111
Q ss_pred --h---HHHHHHH-cC-----------------CCChhhHHHHhccCCChHHHhhhHHHHH-HHHh----cCC-----HH
Q 017527 208 --L---TSNILST-LE-----------------LSSPDELIGWTYVDPSWARIAALVPVVV-SCAE----AGD-----EV 254 (370)
Q Consensus 208 --l---~~~~~~~-~~-----------------~~s~~~l~~~~~~~~~~~~~a~~~~~v~-~~A~----~GD-----~~ 254 (370)
| .+.++.. +. +.+ .++.....+.. ..+ ..++.++ +.+. .+| +.
T Consensus 282 ~yLGel~R~il~~~~~~~~lf~~~~~~l~~~~~~~t--~~ls~i~~d~~-~~l-~~~~~il~~~~~~~~t~~D~~~v~~i 357 (457)
T 2yhx_A 282 KNXGQSLRDVLMXFKXXGQXHXXXAXSFXAANVENT--SYPAKIQKLPH-FDL-RXXXDLFXGDQGIAXKTXMKXVVRRX 357 (457)
T ss_dssp GGHHHHHHHHHHHHHHTTSSSSSCCCSCCSTTCSCT--HHHHHHHHCCS-SSC-HHHHHHHHHHHTCCCCHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHHhcccccccccchhcccccCcCh--HHHHHHhcCCc-hhh-hHHHHHHHHHhCCCccchhhHHHHHH
Confidence 1 1111111 00 000 00111110100 000 1145666 6666 778 89
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHHHHHhhCCCceeeCCC--CCcccc
Q 017527 255 ANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIRPK--VCIWPH 332 (370)
Q Consensus 255 A~~il~~a~~~Lg~~l~~vv~~l~~~~~~~~~P~~VVlgGgv~~~~~~~~l~~~v~~~l~~~~p~~~~~~p~--~~~~~~ 332 (370)
|..+.+|+++.+|.+|+++++.+++ ++..|+++||+ +.++.| .+.+++.+++.++... |. -..+.+
T Consensus 358 a~~V~~RaA~l~A~~iaai~~~~~~------~~~~V~vdGsv-~~~p~f--~~~l~~~l~~l~~~~~---~~~~~~~v~~ 425 (457)
T 2yhx_A 358 LFLIAAYAFRLVVCXIXAICQKKGY------SSGHIAAXGSX-RSYSGF--SXNSATXNXNIYGWPQ---SAXXSKPIXI 425 (457)
T ss_dssp HHHHHHHHHHHHTHHHHHHHHHHTC------SSEEEEEESTT-TTSTTH--HHHHHHHHHHHHCCCC---SSGGGSSEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCC------CcEEEEEECCc-ccCchH--HHHHHHHHHHhhCccc---ccccCcceEE
Confidence 9999999999999999999999992 23899999999 999887 9999999998653221 11 124555
Q ss_pred cccccccccccccceeE
Q 017527 333 WHSCDQASANCCGAALC 349 (370)
Q Consensus 333 ~~~~~~~~~~~~~~~~~ 349 (370)
..++++. ..|||-++
T Consensus 426 ~~~~dgs--g~GAAl~a 440 (457)
T 2yhx_A 426 TPAIDGX--GAASXVIX 440 (457)
T ss_dssp EECCCTT--THHHHHHH
T ss_pred EECCCch--hhhHHHHH
Confidence 5555555 78886655
No 28
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=99.90 E-value=4.1e-23 Score=208.02 Aligned_cols=289 Identities=15% Similarity=0.122 Sum_probs=183.1
Q ss_pred CcEEEEEEcCccceEEEEEeCCCCCCCCCCCC-C----e-EEEEEecCCCccccCHHHHHHHHHHHHHHHHHHcCCCccC
Q 017527 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPL-P----V-LARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSA 94 (370)
Q Consensus 21 ~~~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g-~----i-l~~~~~~~~n~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~ 94 (370)
.+++|+||+|||++|++++++ +| + + ..+...|+ +....+.+++++.|.++|++++++.+... +
T Consensus 67 ~G~~lalDlGGTn~Rv~~V~l---------~G~~~~~~i~~~~~~ip~-~~~~~~~~~lfd~Ia~~i~~~l~~~~~~~-~ 135 (451)
T 1bdg_A 67 TGNFLALDLGGTNYRVLSVTL---------EGKGKSPRIQERTYCIPA-EKMSGSGTELFKYIAETLADFLENNGMKD-K 135 (451)
T ss_dssp CEEEEEEEESSSSEEEEEEEE---------CC-CCCCEEEEEEECCCT-TTTTSBHHHHHHHHHHHHHHHHHHTTCCS-S
T ss_pred cceEEEEEeCCCeEEEEEEec---------CCCCcceEEEEEEEecCC-cccCCCHHHHHHHHHHHHHHHHHhcCCCc-c
Confidence 468999999999999999998 67 5 4 33444443 22234679999999999999999877543 3
Q ss_pred cceEEEeecCCCCh---h------h----------HHHHHHHHHhhC---CCCceE---EEeChHHHHHHhhc-CCCCCe
Q 017527 95 VRAVCLAVSGVNHP---T------D----------QQRILNWLRDIF---PGNVRL---YVHNDALAALASGT-MGKLHG 148 (370)
Q Consensus 95 v~~IgIgvpG~~~~---~------~----------~~~l~~~L~~~f---~~~~pV---~V~NDa~aa~~g~~-~g~~~~ 148 (370)
...+|++.|++.+. . | +.++.+.|++.+ + .|| .|.||++++++++. .+.++.
T Consensus 136 ~~~lG~tfsfPv~q~~~~~G~l~~wtKgf~~~~~~g~dv~~~L~~al~r~~--l~v~v~al~NDtv~tlla~~y~~~~~~ 213 (451)
T 1bdg_A 136 KFDLGFTFSFPCVQKGLTHATLVRWTKGFSADGVEGHNVAELLQTELDKRE--LNVKCVAVVNDTVGTLASCALEDPKCA 213 (451)
T ss_dssp CEEEEEEECSCEEEETTTEEEECCCCTTCCCBTCTTSBHHHHHHHHHHTTT--CCEEEEEEECHHHHHHHHHHTTCTTEE
T ss_pred ccceEEEEeeEeccccCCCeEEeccccccCCCCCCCCcHHHHHHHHHHHcC--CCcceEEEEEchHHHHHHhcccCCCcE
Confidence 47899999999653 1 2 236777777777 5 677 99999999999875 566788
Q ss_pred EEEEEcccceeeeeccCCce------------EeeCCCCCCcCCCCchHHHHHHHHHHHHHHHcC---CC------CCch
Q 017527 149 CVLIAGTGTIAYGFTEDGRD------------ARAAGAGPILGDWGSGYGIAAQALTAVIRAYDG---RG------PDTM 207 (370)
Q Consensus 149 v~l~~GTGi~g~gii~dG~l------------~~aGg~G~llgd~Gs~~~iG~~~~~~~~~~~dg---~~------~~~~ 207 (370)
+++|+|||+++ +++.+++. .-..|||++ ++.+.- ..-+......+.+..+ .. +...
T Consensus 214 iglIlGTG~na-~yve~~~~i~~~~g~~~g~m~In~EwG~f-~~~~~~-~~p~t~~D~~lD~~s~~pg~q~~Ek~~SG~y 290 (451)
T 1bdg_A 214 VGLIVGTGTNV-AYIEDSSKVELMDGVKEPEVVINTEWGAF-GEKGEL-DCWRTQFDKSMDIDSLHPGKQLYEKMVSGMY 290 (451)
T ss_dssp EEEEESSSEEE-EEEEETTTCGGGCSCSSSEEEEECCGGGT-TTTSTT-TTTCCHHHHHHHHTSSSTTSCTTHHHHSHHH
T ss_pred EEEEEeCCcce-EEEEcCccccCcCCCccCcEEEecCcccC-CCcccc-cCCCCcchhhhhhcCCCCCcccchhhhhhhH
Confidence 99999999955 67788764 224556654 211100 0000000000000000 00 0001
Q ss_pred ---hHHHHHHHc-------------------CCCChhhHHHHhccCCChHHHhhhHHHHHHH-Hh-----cCC-----HH
Q 017527 208 ---LTSNILSTL-------------------ELSSPDELIGWTYVDPSWARIAALVPVVVSC-AE-----AGD-----EV 254 (370)
Q Consensus 208 ---l~~~~~~~~-------------------~~~s~~~l~~~~~~~~~~~~~a~~~~~v~~~-A~-----~GD-----~~ 254 (370)
+.+.++..+ .+++ ..+.....+.. ..+ ..++.+++. +. .+| +.
T Consensus 291 Lgel~R~~l~~~~~~~~lf~~~~~~~l~~~~~l~t--~~ls~i~~d~~-~~~-~~~~~i~~~~~~~~~~~~~d~~~~~~v 366 (451)
T 1bdg_A 291 LGELVRHIIVYLVEQKILFRGDLPERLKVRNSLLT--RYLTDVERDPA-HLL-YNTHYMLTDDLHVPVVEPIDNRIVRYA 366 (451)
T ss_dssp HHHHHHHHHHHHHHTTSSGGGCCCSGGGSTTCSCT--THHHHHTTCCT-TCC-HHHHHHHHHTSCCSSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcccccccccchHhhcCCCccch--HHHhhhhccCc-cch-HHHHHHHHHHhCCCCCCHHHHHHHHHH
Confidence 111111111 1101 11111111110 000 123667766 54 678 99
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCc--cEEEEcCcccCcccccchHHHHHHHHhhC-CCceeeCCCCCccc
Q 017527 255 ANKILQDSVEELALSVKAVVQRLSLSGEDGKHSF--PLVMVGGVLEANRRWDIGREVVKCILRDY-PGAVPIRPKVCIWP 331 (370)
Q Consensus 255 A~~il~~a~~~Lg~~l~~vv~~l~~~~~~~~~P~--~VVlgGgv~~~~~~~~l~~~v~~~l~~~~-p~~~~~~p~~~~~~ 331 (370)
|..+++++++++|.+++++++.++ |+ .|+++||+++.++.| .+.+++.+++.. |.+ +
T Consensus 367 a~~V~~RaA~lla~~ia~i~~~~~--------~~~~~V~i~Ggv~~~~~~~--~~~l~~~l~~~~~~~~----------~ 426 (451)
T 1bdg_A 367 CEMVVKRAAYLAGAGIACILRRIN--------RSEVTVGVDGSLYKFHPKF--CERMTDMVDKLKPKNT----------R 426 (451)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHC--------CSEEEEEEESHHHHHCTTH--HHHHHHHHHHHSCTTC----------E
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhC--------CCceEEEEeCchhcCchhH--HHHHHHHHHHHhCCCC----------c
Confidence 999999999999999999999999 57 888999999999887 999999999874 311 2
Q ss_pred ccccccccccccccceeE
Q 017527 332 HWHSCDQASANCCGAALC 349 (370)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~ 349 (370)
|.....++.+.+|||.++
T Consensus 427 i~~~l~~dgs~iGAAllA 444 (451)
T 1bdg_A 427 FCLRLSEDGSGKGAAAIA 444 (451)
T ss_dssp EEEEECTTHHHHHHHHHH
T ss_pred EEEEECCCccHHHHHHHH
Confidence 222222334488888766
No 29
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=99.90 E-value=3.2e-23 Score=225.00 Aligned_cols=291 Identities=16% Similarity=0.129 Sum_probs=185.3
Q ss_pred CcEEEEEEcCccceEEEEEeCCCCCCCCCCCCC----e-EEEEEecCCCc-cccCHHHHHHHHHHHHHHHHHHcCCCccC
Q 017527 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPLP----V-LARAAAGCSNH-NSVGEDAARETIEKVMADALLKSGSNRSA 94 (370)
Q Consensus 21 ~~~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~----i-l~~~~~~~~n~-~~~~~~~~~~~l~~~i~~~l~~~~~~~~~ 94 (370)
.+.+||||+|||++|+++++. +|+ + +.+.+.+++.. ...+.+++++.|.++|++++++.+....
T Consensus 77 ~G~~laiDlGGTnirv~lv~~---------~G~~~~~i~~~~~~~~ip~~~~~~~~~~lf~~Ia~~i~~~l~~~~~~~~- 146 (917)
T 1cza_N 77 KGDFIALDLGGSSFRILRVQV---------NHEKNQNVHMESEVYDTPENIVHGSGSQLFDHVAECLGDFMEKRKIKDK- 146 (917)
T ss_dssp CEEEEEEEESSSSEEEEEEEE---------EEETTEEEEEEEEEECCCHHHHSSBHHHHHHHHHHHHHHHHHHHTCTTS-
T ss_pred cceEEEEEeCCCeEEEEEEEe---------cCCCcceEEEEEEEEECCcccccCCHHHHHHHHHHHHHHHHHhcCCCCC-
Confidence 468999999999999999998 665 5 55555555421 1136789999999999999987765432
Q ss_pred cceEEEeecCCCCh---h------h----------HHHHHHHHHhhCC----C-CceEEEeChHHHHHHhhc-CCCCCeE
Q 017527 95 VRAVCLAVSGVNHP---T------D----------QQRILNWLRDIFP----G-NVRLYVHNDALAALASGT-MGKLHGC 149 (370)
Q Consensus 95 v~~IgIgvpG~~~~---~------~----------~~~l~~~L~~~f~----~-~~pV~V~NDa~aa~~g~~-~g~~~~v 149 (370)
...+||++|++.+. . | +.++.+.|++.+. . ..||.|.||++|++++++ .+.++.+
T Consensus 147 ~~~lGi~fs~P~~q~~~~~G~l~~wtkgfni~~~~g~~v~~~L~~~l~r~g~~pv~~val~NDa~~tll~e~~~~~~~~i 226 (917)
T 1cza_N 147 KLPVGFTFSFPCQQSKIDEAILITWTKRFKASGVEGADVVKLLNKAIKKRGDYDANIVAVVNDTVGTMMTCGYDDQHCEV 226 (917)
T ss_dssp CCCEEEEECSCEECSSTTCCEECCCCTTCCCBTCTTSBHHHHHHHHHHHHCSCCCCEEEEECHHHHHHHHHHHHCTTEEE
T ss_pred cccEEEEEccccccCcCCceEEEecccCCCCCcccCCchHHHHHHHHhhcCCCCceEEEEEEhhHHHHHHhhccCCCcEE
Confidence 23677777777431 1 1 2367777777663 1 137999999999999885 6778999
Q ss_pred EEEEcccceeeeeccCCc-----------eEeeCCCCCCcCCCCc------hHHHHHHHHHHHHHHHcCCC---------
Q 017527 150 VLIAGTGTIAYGFTEDGR-----------DARAAGAGPILGDWGS------GYGIAAQALTAVIRAYDGRG--------- 203 (370)
Q Consensus 150 ~l~~GTGi~g~gii~dG~-----------l~~aGg~G~llgd~Gs------~~~iG~~~~~~~~~~~dg~~--------- 203 (370)
++|+|||++| +++.+|+ ...++||||+- +.+. .+.. .+.+..+..
T Consensus 227 glilGTGvng-g~i~~g~~i~~~~G~~g~~~in~E~G~f~-~~~~l~~~~t~~D~-------~~dc~~g~pg~g~~Ek~~ 297 (917)
T 1cza_N 227 GLIIGTGTNA-CYMEELRHIDLVEGDEGRMCINTEWGAFG-DDGSLEDIRTEFDR-------AIDAYSLNPGKQLFEKMV 297 (917)
T ss_dssp EEEESSSEEE-EEEEEGGGCTTSSCCSSEEEEECCGGGTT-TTTTTTTTCCHHHH-------HHHHTSSSTTSSTTHHHH
T ss_pred EEEEECCcce-EEEecCcccccccCCCCceEEeccccccC-CccccccCCCcccc-------ccccCCcCCCccHhHHHh
Confidence 9999999955 6888887 34578888862 1110 0000 000111110
Q ss_pred CCchhHH---HHHHHc-------------------CCCChhhHHHHhccCCChHHHhhhHHHHHHHH----hcCC-----
Q 017527 204 PDTMLTS---NILSTL-------------------ELSSPDELIGWTYVDPSWARIAALVPVVVSCA----EAGD----- 252 (370)
Q Consensus 204 ~~~~l~~---~~~~~~-------------------~~~s~~~l~~~~~~~~~~~~~a~~~~~v~~~A----~~GD----- 252 (370)
+...+.+ .++..+ .+ +...+ .... +. ...+ ..+..|++.+ ..||
T Consensus 298 SG~yLgel~r~~l~~~~~~~~~~~~~~~~~l~~~~~l-~t~~v-s~~~-~~-~~~~-~~~~~i~~~~~~~~~~~D~~~~~ 372 (917)
T 1cza_N 298 SGMYLGELVRLILVKMAKEGLLFEGRITPELLTRGKF-NTSDV-SAIE-KN-KEGL-HNAKEILTRLGVEPSDDDCVSVQ 372 (917)
T ss_dssp SHHHHHHHHHHHHHHHHHTTSSGGGCCCTTTTSTTSS-CHHHH-HHHT-CT-TTHH-HHHHHHHHHTTCCCCHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHhhccccccccccchhhcccccc-ChHHH-HHHh-cc-cccH-HHHHHHHHHhCCCCCHHHHHHHH
Confidence 0011111 111000 00 00011 0011 00 0011 1234567666 4556
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh--ccCCCCCCCCccEEEEcCcccCcccccchHHHHHHHHhhCCCceeeCCCCCcc
Q 017527 253 EVANKILQDSVEELALSVKAVVQRL--SLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIRPKVCIW 330 (370)
Q Consensus 253 ~~A~~il~~a~~~Lg~~l~~vv~~l--~~~~~~~~~P~~VVlgGgv~~~~~~~~l~~~v~~~l~~~~p~~~~~~p~~~~~ 330 (370)
+.|..+++++++++|.+|+++++.+ ||.. ...++.|++||||++.++.| .+.+++.+++..|. ...
T Consensus 373 ~~a~~v~~raa~llA~gia~ii~~l~~dp~~--~~~~~~IvigGgV~~~~~~~--~~~l~~~l~~~~~~--------~~~ 440 (917)
T 1cza_N 373 HVCTIVSFRSANLVAATLGAILNRLRDNKGT--PRLRTTVGVDGSLYKTHPQY--SRRFHKTLRRLVPD--------SDV 440 (917)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC--SSEEEEEEEECHHHHHCSSH--HHHHHHHHHHHCTT--------EEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCcc--cCcceEEEECCchhhccHHH--HHHHHHHHHHhcCC--------Cce
Confidence 9999999999999999999999999 7200 00118999999999999887 99999999997643 234
Q ss_pred cccccccccccccccceeE
Q 017527 331 PHWHSCDQASANCCGAALC 349 (370)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~ 349 (370)
.+..++++ +..|||.++
T Consensus 441 ~i~~a~dg--s~~GAA~la 457 (917)
T 1cza_N 441 RFLLSESG--SGKGAAMVT 457 (917)
T ss_dssp EEEECTTC--HHHHHHHHH
T ss_pred EEEEeccc--hHHHHHHHH
Confidence 55555444 488988766
No 30
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=99.84 E-value=1.3e-20 Score=204.65 Aligned_cols=300 Identities=15% Similarity=0.122 Sum_probs=185.1
Q ss_pred CcEEEEEEcCccceEEEEEeCCCCCCCCCCC-CC--eE----EEEEecCCCccccCHHHHHHHHHHHHHHHHHHcCCCcc
Q 017527 21 REVILGLDGGTTSTVCICMPVISMSDSLPDP-LP--VL----ARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRS 93 (370)
Q Consensus 21 ~~~vlGVDiGgT~i~~~l~d~~~~~~~~~~~-g~--il----~~~~~~~~n~~~~~~~~~~~~l~~~i~~~l~~~~~~~~ 93 (370)
.+.+|+||+|||++|++++++ + |+ ++ .+...|. +....+.+++++.|.++|.+++++.+....
T Consensus 525 ~G~~lalDlGGTn~Rv~~V~l---------~~g~~~~~~~~~~~~~ip~-~~~~~~~~~lfd~Ia~~i~~~l~~~~~~~~ 594 (917)
T 1cza_N 525 NGDFLALDLGGTNFRVLLVKI---------RSGKKRTVEMHNKIYAIPI-EIMQGTGEELFDHIVSCISDFLDYMGIKGP 594 (917)
T ss_dssp CEEEEEEEESSSSEEEEEEEE---------ECSTTCEEEEEEEEECCCH-HHHTSBHHHHHHHHHHHHHHHHHHHTCCSS
T ss_pred ceEEEEEEECCCcEEEEEEEe---------CCCcceeEEeeeeEEecCc-ccccCCHHHHHHHHHHHHHHHHHHcCCCcc
Confidence 568999999999999999998 3 43 54 3333332 212235789999999999999998776544
Q ss_pred CcceEEEeecCCCCh---------hh----------HHHHHHHHHhhC----CC-CceEEEeChHHHHHHhhc-CCCCCe
Q 017527 94 AVRAVCLAVSGVNHP---------TD----------QQRILNWLRDIF----PG-NVRLYVHNDALAALASGT-MGKLHG 148 (370)
Q Consensus 94 ~v~~IgIgvpG~~~~---------~~----------~~~l~~~L~~~f----~~-~~pV~V~NDa~aa~~g~~-~g~~~~ 148 (370)
.+ .+|++.|++.+. .| +.++.+.|++.+ +. ..||.|.||+++.++++. .+.++.
T Consensus 595 ~l-~lG~tfsfPv~q~~i~~~~L~~WtKgf~~~~~~g~dv~~~L~~al~r~~~~~v~~val~NDtv~tlla~~y~~~~~~ 673 (917)
T 1cza_N 595 RM-PLGFTFSFPCQQTSLDAGILITWTKGFKATDCVGHDVVTLLRDAIKRREEFDLDVVAVVNDTVGTMMTCAYEEPTCE 673 (917)
T ss_dssp CC-EEEEEECSCEEEEETTEEEECCCCTTCCCBSCTTSBHHHHHHHHHHHHTSCCCEEEEEECHHHHHHHHHHTTCTTEE
T ss_pred ce-eEEEEeeccccccccCccEECceecccccCCcCCCcHHHHHHHHHHhcCCCCceEEEEEEccHHHHHHhccCCCCcE
Confidence 44 899999999652 23 235666666655 31 128999999999999874 667788
Q ss_pred EEEEEcccceeeeeccCCceEe--eCCCCCCcCCCC-chHHHHHHHH-----HHHHHH------------HcCCCCCchh
Q 017527 149 CVLIAGTGTIAYGFTEDGRDAR--AAGAGPILGDWG-SGYGIAAQAL-----TAVIRA------------YDGRGPDTML 208 (370)
Q Consensus 149 v~l~~GTGi~g~gii~dG~l~~--aGg~G~llgd~G-s~~~iG~~~~-----~~~~~~------------~dg~~~~~~l 208 (370)
+.+|+|||+++ +++.+++... .|++||+..+.. ++ +|...+ +..-.. ++...+...|
T Consensus 674 iglIlGTG~na-~y~e~~~~i~~~~g~~g~m~In~EwG~--fg~~~~l~~~~T~~D~~~d~~s~~pG~q~~Ek~~SG~yL 750 (917)
T 1cza_N 674 VGLIVGTGSNA-CYMEEMKNVEMVEGDQGQMCINMEWGA--FGDNGCLDDIRTHYDRLVDEYSLNAGKQRYEKMISGMYL 750 (917)
T ss_dssp EEEEESSSEEE-EEEEETTTCTTSSCCSSEEEEECCGGG--TTTTSTTTTTCCHHHHHHHHTSTTTTSCTTGGGTSTTTH
T ss_pred EEEEEeCCeeE-EEEEcCccccCcCCCcCcEEEeccccc--CCCcccccCCCCchhhhhhhcCCCCCCCchHHhhhHhHH
Confidence 99999999965 6778876421 245555433211 11 111000 000000 1111111222
Q ss_pred HH---HHHHHcCCCC-------hh----------hHHHHhccCCChHHHhhhHHHHHHHHh----cCC-----HHHHHHH
Q 017527 209 TS---NILSTLELSS-------PD----------ELIGWTYVDPSWARIAALVPVVVSCAE----AGD-----EVANKIL 259 (370)
Q Consensus 209 ~~---~~~~~~~~~s-------~~----------~l~~~~~~~~~~~~~a~~~~~v~~~A~----~GD-----~~A~~il 259 (370)
.+ .++..+.... ++ ..+.....+.. .. .....+++.+. .+| +.|..+.
T Consensus 751 gel~R~il~~~~~~~~lf~~~~~~~l~~~~~~~t~~ls~ie~d~~--~~-~~~~~i~~~~~~~~~~~D~~~~~~ia~~v~ 827 (917)
T 1cza_N 751 GEIVRNILIDFTKKGFLFRGQISETLKTRGIFETKFLSQIESDRL--AL-LQVRAILQQLGLNSTCDDSILVKTVCGVVS 827 (917)
T ss_dssp HHHHHHHHHHHHHTTSSGGGCCCTTTTSTTCSCHHHHHHHTCSSC--CH-HHHHHHHHHHTCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccccccccccchhhccCCccchHHhhhhhcCcc--hh-hHHHHHHHHhCCCCChHHHHHHHHHHHHHH
Confidence 11 1111110000 00 01111111110 00 01234777665 678 8999999
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHHHHHhhCCCceeeCCCCCccccccccccc
Q 017527 260 QDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIRPKVCIWPHWHSCDQA 339 (370)
Q Consensus 260 ~~a~~~Lg~~l~~vv~~l~~~~~~~~~P~~VVlgGgv~~~~~~~~l~~~v~~~l~~~~p~~~~~~p~~~~~~~~~~~~~~ 339 (370)
+|+++++|.+|+++++.+++....+..+..|+++||+++.++.| .+.+++.+++..|..+ +.+..++++.
T Consensus 828 ~RaA~l~a~~iaai~~~~~~~~~~~~~~~~V~vdGsv~~~~p~f--~~~~~~~l~~l~~~~~--------v~~~~~~dgs 897 (917)
T 1cza_N 828 RRAAQLCGAGMAAVVDKIRENRGLDRLNVTVGVDGTLYKLHPHF--SRIMHQTVKELSPKCN--------VSFLLSEDGS 897 (917)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCSSEEEEEEEECHHHHHCTTH--HHHHHHHHHHHSTTEE--------EEEEECSSCS
T ss_pred HHHHHHHHHHHHHHHHHhCcccccCccceEEEECCHHHHcCcHH--HHHHHHHHHHhCCCCc--------eEEEEecCCh
Confidence 99999999999999999984111111126899999999999988 9999999999765432 3455555555
Q ss_pred ccccccceeE
Q 017527 340 SANCCGAALC 349 (370)
Q Consensus 340 ~~~~~~~~~~ 349 (370)
..|||-++
T Consensus 898 --g~GAAl~a 905 (917)
T 1cza_N 898 --GKGAALIT 905 (917)
T ss_dssp --HHHHHHHH
T ss_pred --HHHHHHHH
Confidence 78887665
No 31
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=99.69 E-value=7.3e-16 Score=155.67 Aligned_cols=292 Identities=11% Similarity=0.051 Sum_probs=173.0
Q ss_pred CcEEEEEEcCccceEEEEEeCCCCCCCCCCCCC-----eEEEEEecCCCccccCHHHHHHHHHHHHHHHHHHcCCCc-cC
Q 017527 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPLP-----VLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNR-SA 94 (370)
Q Consensus 21 ~~~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~-----il~~~~~~~~n~~~~~~~~~~~~l~~~i~~~l~~~~~~~-~~ 94 (370)
.+.+|++|+|||++|++++++ +|+ +..+...|. +....+.+++++.|.+.|.+++++..... .+
T Consensus 79 ~G~~LalDlGGTn~Rv~~V~l---------~g~~~~~~~~~~~~Ip~-~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~ 148 (485)
T 3o8m_A 79 TGDFLALDLGGTNLRVVLVKL---------GGNHDFDTTQNKYRLPD-HLRTGTSEQLWSFIAKCLKEFVDEWYPDGVSE 148 (485)
T ss_dssp EEEEEEEEESSSEEEEEEEEE---------ESSSCEEEEEEEEECCT-TGGGSBHHHHHHHHHHHHHHHHHHHCTTCCSS
T ss_pred ceEEEEEEecCCeEEEEEEEE---------CCCCceEEEEEEEecCc-hhccCCHHHHHHHHHHHHHHHHHHhccccccc
Confidence 468999999999999999998 565 433444433 23222478999999999999999876432 45
Q ss_pred cceEEEeecCCCChh---------h----------HHHHHHHHHhhC---CCCce---EEEeChHHHHHHhhc-CCCCCe
Q 017527 95 VRAVCLAVSGVNHPT---------D----------QQRILNWLRDIF---PGNVR---LYVHNDALAALASGT-MGKLHG 148 (370)
Q Consensus 95 v~~IgIgvpG~~~~~---------~----------~~~l~~~L~~~f---~~~~p---V~V~NDa~aa~~g~~-~g~~~~ 148 (370)
...+|++.|++.+.. | +.++.+.|++.+ + .| +.|.||++++++++. .+.++.
T Consensus 149 ~l~lGftfSfP~~q~~i~~g~li~wtKGF~i~~~~G~dv~~~L~~al~r~g--l~v~v~aivNDtv~tll~~~y~~~~~~ 226 (485)
T 3o8m_A 149 PLPLGFTFSYPASQKKINSGVLQRWTKGFDIEGVEGHDVVPMLQEQIEKLN--IPINVVALINDTTGTLVASLYTDPQTK 226 (485)
T ss_dssp CEEEEEEECSCEECSBTTCCEECCCCTTCCCBTCTTSBHHHHHHHHHHHTT--CCEEEEEEECHHHHHHHHHHHHCTTEE
T ss_pred ccceEEEEeeeEEEcccCCEEEeeccccccCCCcCCccHHHHHHHHHHhcC--CCceEEEEEEcHHHHHHHHhhCCCCcE
Confidence 678999999984311 2 235666666665 5 45 679999999999874 566778
Q ss_pred EEEEEcccceeeeeccC------------------CceEeeCCCCCCcCCCC-----chHHHHHHHHHHHHHHHcCCCC-
Q 017527 149 CVLIAGTGTIAYGFTED------------------GRDARAAGAGPILGDWG-----SGYGIAAQALTAVIRAYDGRGP- 204 (370)
Q Consensus 149 v~l~~GTGi~g~gii~d------------------G~l~~aGg~G~llgd~G-----s~~~iG~~~~~~~~~~~dg~~~- 204 (370)
+.+|+|||++++ ++.+ ++..-.=|||.+ ++.. .-|..- +.. ....++.
T Consensus 227 iglIlGTG~N~~-y~e~~~~i~k~~~~~~~~~~~~~~miINtEwG~F-~~~~~~lp~T~~D~~---lD~---~S~nPG~Q 298 (485)
T 3o8m_A 227 MGIIIGTGVNGA-YYDVVSGIEKLEGLLPEDIGPDSPMAINCEYGSF-DNEHLVLPRTKYDVI---IDE---ESPRPGQQ 298 (485)
T ss_dssp EEEEESSSEEEE-EEEEGGGCGGGTTTCCTTSCTTCEEEEECCGGGT-TTTCSSSCCCHHHHH---HHH---HSSSTTSC
T ss_pred EEEEEecCcceE-EEeeccccccccccccccCCCCCcEEEEcccccC-CCCcccCCCCchhhH---Hhh---cCCCCCce
Confidence 899999999775 5432 123334677765 3210 111110 000 0000000
Q ss_pred -------C---chhHHHHHHH-------------------cCCCChhhHHHHhccCCChHHHhhhHHHHHHH--------
Q 017527 205 -------D---TMLTSNILST-------------------LELSSPDELIGWTYVDPSWARIAALVPVVVSC-------- 247 (370)
Q Consensus 205 -------~---~~l~~~~~~~-------------------~~~~s~~~l~~~~~~~~~~~~~a~~~~~v~~~-------- 247 (370)
. ..+.+.++-. |.+.+ .++.....++.. .+. .+..+++.
T Consensus 299 ~fEKmiSG~YLGEivRlil~~l~~~~~lF~~~~~~~L~~~~~l~T--~~ls~i~~d~~~-~l~-~~~~~l~~~l~~~~t~ 374 (485)
T 3o8m_A 299 AFEKMTSGYYLGEIMRLVLLDLYDSGFIFKDQDISKLKEAYVMDT--SYPSKIEDDPFE-NLE-DTDDLFKTNLNIETTV 374 (485)
T ss_dssp HHHHHHSTTTHHHHHHHHHHHHHHTTSSSTTSCCGGGGSTTCSCT--HHHHHHHHCCCT-TCH-HHHHHHHHHHCCCCCH
T ss_pred eeccccccchHHHHHHHHHHHHHHcCcccCCCCcHHhcCCCCcCc--HHHHHHHcCCcc-hHH-HHHHHHHHHhCCCCCH
Confidence 0 0111211111 11111 111111111100 000 01111111
Q ss_pred --HhcCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEE--EcCcccCcccccchHHHHHHHHhhCCCceee
Q 017527 248 --AEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVM--VGGVLEANRRWDIGREVVKCILRDYPGAVPI 323 (370)
Q Consensus 248 --A~~GD~~A~~il~~a~~~Lg~~l~~vv~~l~~~~~~~~~P~~VVl--gGgv~~~~~~~~l~~~v~~~l~~~~p~~~~~ 323 (370)
+..=-..|..+.+|+++.+|.+++++++..+ |+.+++ .||+.+.++.| .+.+++.+++..+....
T Consensus 375 ~d~~~vr~i~~~V~~RAA~L~Aa~iaail~~~~--------~~~~~VgvdGSv~~~~P~f--~~~~~~~l~~ll~~~~~- 443 (485)
T 3o8m_A 375 VERKLIRKLAELVGTRAARLTVCGVSAICDKRG--------YKTAHIAADGSVFNRYPGY--KEKAAQALKDIYNWDVE- 443 (485)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT--------CSSEEEEEESHHHHHSTTH--HHHHHHHHHHHHTCCCC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--------CCceEEEEecChhccCccH--HHHHHHHHHHHhccccc-
Confidence 0000145778899999999999999999999 466555 69999999998 99999999997653210
Q ss_pred CCCCCcccccccccccccccccceeE
Q 017527 324 RPKVCIWPHWHSCDQASANCCGAALC 349 (370)
Q Consensus 324 ~p~~~~~~~~~~~~~~~~~~~~~~~~ 349 (370)
.|.-..+.+..++++. ..|||-++
T Consensus 444 ~~~~~~v~l~~a~DGS--g~GAAliA 467 (485)
T 3o8m_A 444 KMEDHPIQLVAAEDGS--GVGAAIIA 467 (485)
T ss_dssp SGGGCSEEEEECCCTT--THHHHHHH
T ss_pred cCCCceEEEEEcCCCh--HHHHHHHH
Confidence 0112345555666666 88887554
No 32
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=99.39 E-value=3.9e-11 Score=119.64 Aligned_cols=295 Identities=17% Similarity=0.115 Sum_probs=164.7
Q ss_pred CcEEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEE-EEecCC-CccccCHHHHHHHHHHHHHHHHHHcCCCccCcceE
Q 017527 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLAR-AAAGCS-NHNSVGEDAARETIEKVMADALLKSGSNRSAVRAV 98 (370)
Q Consensus 21 ~~~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~-~~~~~~-n~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~v~~I 98 (370)
.+.+|++|+|||++|+.++++ .|.+... .....+ .....+.+++++.|.+.|.+++++.+... +..-+
T Consensus 58 ~G~~LAlDlGGTn~RV~~V~l---------~g~~~~~~~~~~ip~~~~~g~~~~LFd~Ia~~i~~fl~~~~~~~-~~lpl 127 (445)
T 3hm8_A 58 RGDFLALDLGGTNFRVLLVRV---------TTGVQITSEIYSIPETVAQGSGQQLFDHIVDCIVDFQQKQGLSG-QSLPL 127 (445)
T ss_dssp CEEEEEEEESSSSEEEEEEEE---------SSSEEEEEEEECCCHHHHTSBHHHHHHHHHHHHHHHHHHHTCTT-CCCCE
T ss_pred eeEEEEEEecCCeEEEEEEEE---------CCceEEEEEEeccCccccCCCHHHHHHHHHHHHHHHHHHhCccc-ccCcc
Confidence 468999999999999999998 5553321 122222 12222468899999999999998876542 33345
Q ss_pred EEeecCCCCh---------hh----------H----HHHHHHHHhhCCC-CceEEEeChHHHHHHhhc-CCCCCeEEEEE
Q 017527 99 CLAVSGVNHP---------TD----------Q----QRILNWLRDIFPG-NVRLYVHNDALAALASGT-MGKLHGCVLIA 153 (370)
Q Consensus 99 gIgvpG~~~~---------~~----------~----~~l~~~L~~~f~~-~~pV~V~NDa~aa~~g~~-~g~~~~v~l~~ 153 (370)
|+..+-|... .| + ..|++.++++-.. ...+.|.||+++.++++. .+.+..+.+|+
T Consensus 128 GftFSFP~~Q~sl~~g~Li~wtKGF~~~~~~G~dv~~lL~~al~r~~~~~v~vvAivNDTvgTLla~~y~~~~~~iglIl 207 (445)
T 3hm8_A 128 GFTFSFPCRQLGLDQGILLNWTKGFKASDCEGQDVVSLLREAITRRQAVELNVVAIVNDTVGTMMSCGYEDPRCEIGLIV 207 (445)
T ss_dssp EEEECSCEECSSTTCCEECCCCTTCCCBTCTTSBHHHHHHHHHHHTTCSCCCSEEEECHHHHHHHHHHTTCTTEEEEEEE
T ss_pred eEEEeeeeEeccCCceEEEEeeccccCCCCCCCcHHHHHHHHHHhcCCCCcceEEEecCcHHHHHhhccCCCCceEEEEE
Confidence 5555554211 01 1 2355555544221 124889999999998864 45567789999
Q ss_pred cccceeeeecc-----------CCceEeeCCCCCCcCCCC-----------------------------chHHHH---HH
Q 017527 154 GTGTIAYGFTE-----------DGRDARAAGAGPILGDWG-----------------------------SGYGIA---AQ 190 (370)
Q Consensus 154 GTGi~g~gii~-----------dG~l~~aGg~G~llgd~G-----------------------------s~~~iG---~~ 190 (370)
|||++++ ++. .++..-.=|||.+ ++.+ ||.++| +.
T Consensus 208 GTGtNa~-y~e~~~~i~k~~~~~~~miINtEwG~F-g~~~~l~~~~T~~D~~lD~~S~~PG~q~fEKmiSG~YLGEivRl 285 (445)
T 3hm8_A 208 GTGTNAC-YMEELRNVAGVPGDSGRMCINMEWGAF-GDDGSLAMLSTRFDASVDQASINPGKQRFEKMISGMYLGEIVRH 285 (445)
T ss_dssp SSSEEEE-EEEEGGGCTTSCCCSSEEEEECCGGGT-TTTTTTTTTCCHHHHHHHHTSSSTTSSTTGGGTSHHHHHHHHHH
T ss_pred eCCceEE-EEEecccccccCCCCCcEEEEcchhhc-CCCCCCcCCCCccchHHhcCCCCCCceEeeeecchhhHHHHHHH
Confidence 9999876 442 1334444677754 3322 222222 22
Q ss_pred HHHHHHHH---HcCCCCCchhHHHHHHHcCCCChhhHHHHhccCCChHHHhhhHHHHHHHHh---------cCCHHHHHH
Q 017527 191 ALTAVIRA---YDGRGPDTMLTSNILSTLELSSPDELIGWTYVDPSWARIAALVPVVVSCAE---------AGDEVANKI 258 (370)
Q Consensus 191 ~~~~~~~~---~dg~~~~~~l~~~~~~~~~~~s~~~l~~~~~~~~~~~~~a~~~~~v~~~A~---------~GD~~A~~i 258 (370)
.+...... ..+..+. . +.+.+.+.+ .++.....+... .. .+..+++... .=-..|..+
T Consensus 286 iL~~l~~~~~lf~~~~~~-~----L~~~~~l~T--~~ls~ie~D~~~--~~-~~~~~l~~l~~~~t~~d~~~vr~i~~~V 355 (445)
T 3hm8_A 286 ILLHLTSLGVLFRGQQIQ-R----LQTRDIFKT--KFLSEIESDSLA--LR-QVRAILEDLGLPLTSDDALMVLEVCQAV 355 (445)
T ss_dssp HHHHHHHHTSSGGGCCCG-G----GGSTTCSCH--HHHHHHTCTTCC--HH-HHHHHHHTTTCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCCCCcH-H----HcCCCCCCc--HHHHHHhcCCch--HH-HHHHHHHHhCCCCCHHHHHHHHHHHHHH
Confidence 22111110 0000000 0 000010000 111111111100 00 0111211100 001456678
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHHHHHhhCCCceeeCCCCCcccccccccc
Q 017527 259 LQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIRPKVCIWPHWHSCDQ 338 (370)
Q Consensus 259 l~~a~~~Lg~~l~~vv~~l~~~~~~~~~P~~VVlgGgv~~~~~~~~l~~~v~~~l~~~~p~~~~~~p~~~~~~~~~~~~~ 338 (370)
.+|+++..|-+|+++++..+.....+..+-.|-+-|++.+.++.| .+.+++.+.+..|.. .+.+..++++
T Consensus 356 ~~RaA~L~Aa~iaai~~k~~~~~~~~~~~~~VgvDGsvy~~~P~f--~~~l~~~l~~l~~~~--------~v~~~~s~DG 425 (445)
T 3hm8_A 356 SQRAAQLCGAGVAAVVEKIRENRGLEELAVSVGVDGTLYKLHPRF--SSLVAATVRELAPRC--------VVTFLQSEDG 425 (445)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCSSEEEEEEEECHHHHHCTTH--HHHHHHHHHHHCTTE--------EEEEEECSSC
T ss_pred HHHHHHHHHHHHHHHHHHhcccccccccCcEEEEeceehccChhH--HHHHHHHHHHhCCCC--------cEEEEECCCC
Confidence 999999999999999998852111111245888999999999998 999999999987753 3666666666
Q ss_pred cccccccceeE
Q 017527 339 ASANCCGAALC 349 (370)
Q Consensus 339 ~~~~~~~~~~~ 349 (370)
- -.|||-++
T Consensus 426 S--g~GAAl~A 434 (445)
T 3hm8_A 426 S--GKGAALVT 434 (445)
T ss_dssp H--HHHHHHHH
T ss_pred c--hHHHHHHH
Confidence 5 56665443
No 33
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=99.35 E-value=6.2e-11 Score=119.05 Aligned_cols=295 Identities=14% Similarity=0.120 Sum_probs=168.0
Q ss_pred CcEEEEEEcCccceEEEEEeCCCCCCCCCCCCC-----eEE--EEEec-CCCccccCHHHHHHHHHHHHHHHHHHcCCCc
Q 017527 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPLP-----VLA--RAAAG-CSNHNSVGEDAARETIEKVMADALLKSGSNR 92 (370)
Q Consensus 21 ~~~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~-----il~--~~~~~-~~n~~~~~~~~~~~~l~~~i~~~l~~~~~~~ 92 (370)
.+.+|++|+|||+.|+.++.+ .|+ ... +...+ +......+.+++++-|.+.|.+++++.+..
T Consensus 76 ~G~fLAlDlGGTNfRV~~V~L---------~g~~~~~~~~~~~~~~~~Ip~~l~~gt~~eLFd~IA~~i~~fl~~~~~~- 145 (470)
T 3f9m_A 76 VGDFLSLDLGGTNFRVMLVKV---------GEGEEGQWSVKTKHQMYSIPEDAMTGTAEMLFDYISECISDFLDKHQMK- 145 (470)
T ss_dssp CEEEEEEEESSSEEEEEEEEE---------EC----CEEEEEEEEEEECCHHHHSSBHHHHHHHHHHHHHHHHHHTTCS-
T ss_pred ceEEEEEEecCceEEEEEEEE---------CCCCCCcceEEEEEEeecCChHhccCCHHHHHHHHHHHHHHHHhhcccc-
Confidence 458999999999999999988 332 111 11222 221122357899999999999999987654
Q ss_pred cCcceEEEeecCCCChh---------h--------------HHHHHHHHHhh--CCCCceEEEeChHHHHHHhhcC-CCC
Q 017527 93 SAVRAVCLAVSGVNHPT---------D--------------QQRILNWLRDI--FPGNVRLYVHNDALAALASGTM-GKL 146 (370)
Q Consensus 93 ~~v~~IgIgvpG~~~~~---------~--------------~~~l~~~L~~~--f~~~~pV~V~NDa~aa~~g~~~-g~~ 146 (370)
.+..-+|+..+=|.... | ...|++.|+++ ++ -..+.|.||+.+.++++.+ ..+
T Consensus 146 ~~~lpLGfTFSFP~~Q~sl~~g~Li~WTKGF~~~~v~G~DVv~lL~~al~r~g~~~-v~v~AlvNDTVgTL~s~aY~~~~ 224 (470)
T 3f9m_A 146 HKKLPLGFTFSFPVRHEDIDKGILLNWTKGFKASGAEGNNVVGLLRDAIKRRGDFE-MDVVAMVNDTVATMISCYYEDHQ 224 (470)
T ss_dssp SSCCEEEEEECSCEEEEETTEEEECCCCTTCCCBTCBTSBHHHHHHHHHHHHCSCC-CEEEEEECHHHHHHHHHHTTCTT
T ss_pred ccccceEEEEeccccccCCCceEEEeccccccCCCcCCccHHHHHHHHHHhcCCCC-CcEEEEEEcCHHHHHhcccCCCC
Confidence 34455777777664310 1 23566777766 33 1357799999999888754 445
Q ss_pred CeEEEEEcccceeeeecc----------CCceEeeCCCCCCcCCCC-----------------------------chHHH
Q 017527 147 HGCVLIAGTGTIAYGFTE----------DGRDARAAGAGPILGDWG-----------------------------SGYGI 187 (370)
Q Consensus 147 ~~v~l~~GTGi~g~gii~----------dG~l~~aGg~G~llgd~G-----------------------------s~~~i 187 (370)
.-+.+|+|||++++-+-. .++.+-.=|||.+ ++.+ ||.++
T Consensus 225 ~~iGlI~GTGtNa~Y~E~~~~I~k~~~~~~~miINtEwG~F-g~~~~l~~~~T~~D~~lD~~S~nPG~Q~fEKmiSG~YL 303 (470)
T 3f9m_A 225 CEVGMIVGTGCNACYMEEMQNVELVEGDEGRMCVNTEWGAF-GDSGELDEFLLEYDRLVDESSANPGQQLYEKLIGGKYM 303 (470)
T ss_dssp EEEEEEESSSEEEEEEEEGGGCTTSSCCSSEEEEECCGGGT-TTTSTTGGGCCHHHHHHHHHSSSTTSCHHHHTTCHHHH
T ss_pred ceEEEEEecCCceEEeeeccccccccCCCCcEEEeechhhc-CCCcccCCCCCcccHHHhhcCCCCCceeeccccchhhH
Confidence 667899999999874431 2334445677764 4332 12221
Q ss_pred H---HHHHHHHHHH---HcCCCCCchhHHHHHHHcCCCChhhHHHHhccCCChHHHhhhHHHHHHHH---------hcCC
Q 017527 188 A---AQALTAVIRA---YDGRGPDTMLTSNILSTLELSSPDELIGWTYVDPSWARIAALVPVVVSCA---------EAGD 252 (370)
Q Consensus 188 G---~~~~~~~~~~---~dg~~~~~~l~~~~~~~~~~~s~~~l~~~~~~~~~~~~~a~~~~~v~~~A---------~~GD 252 (370)
| +..+...... ..+..+. . +.+.+.+.+ .++.....+.... ..+..+++.. ..=-
T Consensus 304 GEivRliL~~l~~~~~lf~~~~~~-~----L~~~~~l~T--~~ls~ie~d~~~~---~~~~~il~~l~~~~~~~d~~~vr 373 (470)
T 3f9m_A 304 GELVRLVLLRLVDENLLFHGEASE-Q----LRTRGAFET--RFVSQVESDTGDR---KQIYNILSTLGLRPSTTDCDIVR 373 (470)
T ss_dssp HHHHHHHHHHHHHTTCSGGGCCCT-T----TTSTTCSCH--HHHHHHHTCCSSC---HHHHHHHHHTTCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcCcCCCCcH-H----hcCCCCcCc--hHHhhhccCCCch---HHHHHHHHhcCCCCCHHHHHHHH
Confidence 1 2221111100 0000000 0 000011100 1111111111000 0111222110 0001
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHHHHHhhCCCceeeCCCCCcccc
Q 017527 253 EVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILRDYPGAVPIRPKVCIWPH 332 (370)
Q Consensus 253 ~~A~~il~~a~~~Lg~~l~~vv~~l~~~~~~~~~P~~VVlgGgv~~~~~~~~l~~~v~~~l~~~~p~~~~~~p~~~~~~~ 332 (370)
..|..+.+|+++..|-+|+++++..+-....+..+-.|-+-|++.+.++.| .+.+++.+++..|..+ +.+
T Consensus 374 ~i~~~V~~RaA~L~Aa~iaail~k~~~~~~~~~~~~~VgvDGsv~~~yp~f--~~~~~~~l~~l~~~~~--------v~l 443 (470)
T 3f9m_A 374 RACESVSTRAAHMCSAGLAGVINRMRESRSEDVMRITVGVDGSVYKLHPSF--KERFHASVRRLTPSCE--------ITF 443 (470)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSEEEEEEEECHHHHHCTTH--HHHHHHHHHHHCTTEE--------EEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccccccceEEEEeccHHHhCchH--HHHHHHHHHHHcCCCe--------EEE
Confidence 456778999999999999999998863111112235788999999999998 9999999999775433 555
Q ss_pred cccccccccccccceeE
Q 017527 333 WHSCDQASANCCGAALC 349 (370)
Q Consensus 333 ~~~~~~~~~~~~~~~~~ 349 (370)
..++++. ..|||-++
T Consensus 444 ~~a~DGS--g~GAAliA 458 (470)
T 3f9m_A 444 IESEEGS--GRGAALVS 458 (470)
T ss_dssp EECSSHH--HHHHHHHH
T ss_pred EEcCCCc--HHHHHHHH
Confidence 5555555 67776544
No 34
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=98.77 E-value=1.3e-06 Score=81.75 Aligned_cols=225 Identities=14% Similarity=0.140 Sum_probs=118.7
Q ss_pred cEEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEEEEecCCCccccCHHHHHHHHHHHHHHHHHHcCCCccCcceEEEe
Q 017527 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLA 101 (370)
Q Consensus 22 ~~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~~~~~~~n~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~v~~IgIg 101 (370)
.++||||+|+|+++++++|. +|+++.+...++... .. +.+.++++++.+ .+.+..++.++ +
T Consensus 3 ~~~lGiD~Gst~~k~~l~d~---------~g~i~~~~~~~~~~~---~~----~~~~~~l~~l~~-~~~~~~~i~~i--~ 63 (270)
T 1hux_A 3 IYTLGIDVGSTASKCIILKD---------GKEIVAKSLVAVGTG---TS----GPARSISEVLEN-AHMKKEDMAFT--L 63 (270)
T ss_dssp CEEEEEEECSSEEEEEEEET---------TTEEEEEEEEECCSS---CC----HHHHHHHHHHHH-HTCCGGGCSEE--E
T ss_pred cEEEEEEeccceEEEEEEeC---------CCCEEEEEEecCCCC---HH----HHHHHHHHHHHH-cCCChhHEEEE--E
Confidence 38999999999999999998 799999876655321 12 233344555543 34444566654 4
Q ss_pred ecCCCChhhHHHHHHHHHhhCCCCceEEEeChHHHHHHhh-cCCCCCeEEEEEcccceeeeeccCCceEeeCCCCCCcCC
Q 017527 102 VSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASG-TMGKLHGCVLIAGTGTIAYGFTEDGRDARAAGAGPILGD 180 (370)
Q Consensus 102 vpG~~~~~~~~~l~~~L~~~f~~~~pV~V~NDa~aa~~g~-~~g~~~~v~l~~GTGi~g~gii~dG~l~~aGg~G~llgd 180 (370)
++|.... .+.. +. .|+ .|+..|.+.+. +...+..+++-+|.+-.-.-.+.+|++... ...|
T Consensus 64 ~TG~g~~--------~~~~-~~--~~~--v~Ei~ah~~ga~~~~~~~~~vidiGGqd~k~i~~~~g~v~~~-----~mn~ 125 (270)
T 1hux_A 64 ATGYGRN--------SLEG-IA--DKQ--MSELSCHAMGASFIWPNVHTVIDIGGQDVKVIHVENGTMTNF-----QMND 125 (270)
T ss_dssp EESTTTT--------TTTT-TC--SEE--ECHHHHHHHHHHHHCTTCCEEEEEETTEEEEEEEETTEEEEE-----EEES
T ss_pred EeCcccc--------chhh-cC--CCC--cccHHHHHHHHHHhCCCCCEEEEECCCceEEEEEeCCceeee-----cccc
Confidence 5666321 1122 44 455 78888776554 222233356777766534444467765310 0122
Q ss_pred CCchHHHHHHHHHHHHHHHcCCCCCchhHHHHHHHcCCCChhhHHHHhcc--CC--ChHHHhhhH-HHHHHHHhcCCHHH
Q 017527 181 WGSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYV--DP--SWARIAALV-PVVVSCAEAGDEVA 255 (370)
Q Consensus 181 ~Gs~~~iG~~~~~~~~~~~dg~~~~~~l~~~~~~~~~~~s~~~l~~~~~~--~~--~~~~~a~~~-~~v~~~A~~GD~~A 255 (370)
..++ ..|. +.+.+...+++ +.+++-+.... .+ ...+-..++ .+++....+|.+.
T Consensus 126 ~ca~-GtG~------------------~le~~a~~lg~-~~~el~~la~~~~~p~~~~~~c~vfa~s~v~~l~~~g~~~- 184 (270)
T 1hux_A 126 KCAA-GTGR------------------FLDVMANILEV-KVSDLAELGAKSTKRVAISSTCTVFAESEVISQLSKGTDK- 184 (270)
T ss_dssp SCCT-TSHH------------------HHHHHHHHHTC-CTTTHHHHHTTCCSCCCCCCCSHHHHHHHHHHHHHTTCCH-
T ss_pred ccch-hhHH------------------HHHHHHHHhCC-CHHHHHHHHhhCCCCCCcccccchhHhHHHHHHhhCCCCH-
Confidence 2111 0011 11111222221 11222111110 00 000000112 3456666677766
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHHHHH
Q 017527 256 NKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCIL 314 (370)
Q Consensus 256 ~~il~~a~~~Lg~~l~~vv~~l~~~~~~~~~P~~VVlgGgv~~~~~~~~l~~~v~~~l~ 314 (370)
..|+....+.++..+..++...++ ++.|++.||++. ++.| .+.+.+.+.
T Consensus 185 ~di~~av~e~Va~~i~~~~~~~~~-------~~~i~~~GG~a~-n~~~--~~~~~~~lg 233 (270)
T 1hux_A 185 IDIIAGIHRSVASRVIGLANRVGI-------VKDVVMTGGVAQ-NYGV--RGALEEGLG 233 (270)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCC-------CSSEEEESGGGG-CHHH--HHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCC-------CCeEEEeCcccc-CHHH--HHHHHHHHC
Confidence 577777777888877777766653 578999999875 4555 566655553
No 35
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=98.60 E-value=1.1e-05 Score=75.17 Aligned_cols=113 Identities=15% Similarity=0.212 Sum_probs=70.5
Q ss_pred EEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEEEEecCCCccccCHHHHHHHHHHHHHHHHHHcCCCccCcceEEEee
Q 017527 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAV 102 (370)
Q Consensus 23 ~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~~~~~~~n~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~v~~IgIgv 102 (370)
|+||||+|+|+++++++|. +++++........ ..++.+ .+++++++++++.....+..++.
T Consensus 2 ~~lGID~GsT~tk~av~d~---------~~~il~~~~~~~g----~~~e~a----~~vl~~~~~~a~~~~~~~~~~a~-- 62 (276)
T 4ehu_A 2 YTMGLDIGSTASKGVILKN---------GEDIVASETISSG----TGTTGP----SRVLEKLYGKTGLAREDIKKVVV-- 62 (276)
T ss_dssp EEEEEEECSSCEEEEEEET---------TTEEEEEEEESCC----TTSSHH----HHHHHHHHHHHCCCGGGEEEEEE--
T ss_pred eEEEEEcCccEEEEEEEEC---------CCeEEEEEEecCC----CCHHHH----HHHHHHHHHHCCCcchhcccccc--
Confidence 8999999999999999998 7888887765432 123332 33567777788877666665543
Q ss_pred cCCCChhhHHHHHHHHHhhCCCCceEEEeChHHHHHHhhc--CCCCCeEEEEEcccceeeeeccCCce
Q 017527 103 SGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGT--MGKLHGCVLIAGTGTIAYGFTEDGRD 168 (370)
Q Consensus 103 pG~~~~~~~~~l~~~L~~~f~~~~pV~V~NDa~aa~~g~~--~g~~~~v~l~~GTGi~g~gii~dG~l 168 (370)
.|... ..+. .|....|...|.+++.. ....+.++...|.|.-..-+..+|..
T Consensus 63 t~~~~------------~a~~--~~~~~Vne~~aha~a~~~~~~~~~~vl~lgG~~~~~~~~~~~g~~ 116 (276)
T 4ehu_A 63 TGYGR------------MNYS--DADKQISELSCHARGVNFIIPETRTIIDIGGQDAKVLKLDNNGRL 116 (276)
T ss_dssp ESTTG------------GGCC--SCSEECCHHHHHHHHHHHHSTTCCEEEEECSSCEEEEEECTTSCE
T ss_pred CchHH------------HHhh--CCCcccchHHHHHHHHHHhCCCCCeEEEEcCCCceEEEEEecCce
Confidence 33221 1233 57788899998777643 33345555554444323323356654
No 36
>4ijn_A Acetate kinase, acetokinase; proprionate kinase, ATP-dependent, metabolic intermediate biosynthesis, acetyl-COA biosynthesis, hydrolysis; HET: AMP; 1.70A {Mycobacterium smegmatis}
Probab=98.44 E-value=4.6e-05 Score=74.51 Aligned_cols=249 Identities=18% Similarity=0.157 Sum_probs=137.8
Q ss_pred cEEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEEEEecCCC-ccccCHHHHHHHHHHHHHHHHHHcCCCc--cCcceE
Q 017527 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSN-HNSVGEDAARETIEKVMADALLKSGSNR--SAVRAV 98 (370)
Q Consensus 22 ~~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~~~~~~~n-~~~~~~~~~~~~l~~~i~~~l~~~~~~~--~~v~~I 98 (370)
..+|.|.-|.|++|+.+++.. +.+++.+.....-. ....+-.+.++.|.+. +.+.+... +++.+|
T Consensus 23 ~~ILviN~GSSS~K~~l~~~~--------~~~~l~~g~~e~ig~~~~~dh~~a~~~il~~----L~~~~~~~~~~~i~aV 90 (398)
T 4ijn_A 23 VTVLVVNSGSSSLKYAVVRPA--------SGEFLADGIIEEIGSGAVPDHDAALRAAFDE----LAAAGLHLEDLDLKAV 90 (398)
T ss_dssp CEEEEEEECSSCEEEEEECTT--------TCCEEEEEEECSTTBTTBCSHHHHHHHHHHH----HHHTTCCGGGSCEEEE
T ss_pred ccEEEEeCCchhheEEEEECC--------CCceeeeeeeeecCCCCccCHHHHHHHHHHH----HHHcCCCccccceeEE
Confidence 469999999999999999872 34466665433210 0011334455544443 33455433 578888
Q ss_pred EE-eecCC--------CChhhH---------------HHH--HHHHHhhCCCCce-EEEeChHH-------HHHHh----
Q 017527 99 CL-AVSGV--------NHPTDQ---------------QRI--LNWLRDIFPGNVR-LYVHNDAL-------AALAS---- 140 (370)
Q Consensus 99 gI-gvpG~--------~~~~~~---------------~~l--~~~L~~~f~~~~p-V~V~NDa~-------aa~~g---- 140 (370)
|. =|+|= +++.-- .+| ....++.||+ +| |.|-.-+. +...+
T Consensus 91 GhRvVhGG~~f~~~~~I~~~vl~~l~~~~~lAPLHnp~nL~gI~a~~~~~P~-~p~vavfDTafh~tmp~~A~~y~lP~~ 169 (398)
T 4ijn_A 91 GHRMVHGGKTFYKPSVVDDELIAKARELSPLAPLHNPPAIKGIEVARKLLPD-LPHIAVFDTAFFHDLPAPASTYAIDRE 169 (398)
T ss_dssp EEEESCCTTTCCSCEECCHHHHHHHHHTGGGSTTTHHHHHHHHHHHHHHCTT-SCEEEEETTGGGTTCCHHHHCCSSCHH
T ss_pred ecCCCCCCcCCCCCeEeCHHHHHHHHhcCcCCcccCHHHHHHHHHHHHHCCC-CCeEEecCChhhccCcHHHHHcCCCHH
Confidence 75 23442 122110 011 3444566874 77 54433221 11000
Q ss_pred -------------------------hcCCC----CCeEEEEEcccceeeeeccCCceEe-----eCCCCCCcCCCCchHH
Q 017527 141 -------------------------GTMGK----LHGCVLIAGTGTIAYGFTEDGRDAR-----AAGAGPILGDWGSGYG 186 (370)
Q Consensus 141 -------------------------~~~g~----~~~v~l~~GTGi~g~gii~dG~l~~-----aGg~G~llgd~Gs~~~ 186 (370)
+..|. .+.|++.+|+|+.. ..+.+|+... .+--|.+.+...+...
T Consensus 170 ~~~~~giRryGFHGlS~~yva~r~a~~lgk~~~~~~lIv~HLGnGaSv-~Ai~~GksvDtsmG~tpleGl~mgtRsG~iD 248 (398)
T 4ijn_A 170 LAETWHIKRYGFHGTSHEYVSQQAAIFLDRPLESLNQIVLHLGNGASA-SAVAGGKAVDTSMGLTPMEGLVMGTRSGDID 248 (398)
T ss_dssp HHHHTTCCCCCSCHHHHHHHHHHHHHHTTSCGGGCEEEEEEESSSEEE-EEEETTEEEEESCCSSTTSSSCCSSCCCSCC
T ss_pred HHHhcCceEeCccHHhHHHHHHHHHHHhCCChHHccEEEEEECCCcEE-EEEECCEEEEeCCCCCcccCCCCCCCCCCCC
Confidence 11132 37899999999854 5668999864 1212444332211111
Q ss_pred HHHHHHHHHHHHHcCCCCCchhHHHHHHHcCCCChhhHHHHhccCCChHHH--hhhHHHHHHHHhcCCHHHHHHHHHHHH
Q 017527 187 IAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDPSWARI--AALVPVVVSCAEAGDEVANKILQDSVE 264 (370)
Q Consensus 187 iG~~~~~~~~~~~dg~~~~~~l~~~~~~~~~~~s~~~l~~~~~~~~~~~~~--a~~~~~v~~~A~~GD~~A~~il~~a~~ 264 (370)
.+ ..-.+.+..+ -+.+++...++++.....+ ....++|++++++||+.|+.+++.++.
T Consensus 249 p~-------------------~l~~l~~~~~-~s~~e~~~~Lnk~sGLlg~sG~~D~R~i~~~a~~Gd~~A~la~d~f~y 308 (398)
T 4ijn_A 249 PG-------------------VIMYLWRTAG-MSVDDIESMLNRRSGVLGLGGASDFRKLRELIESGDEHAKLAYDVYIH 308 (398)
T ss_dssp HH-------------------HHHHHHHTSC-CCHHHHHHHHHHSCHHHHHHCCSSHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hH-------------------HHHHHHHhcC-CCHHHHHHHHHhccCcceecCCCCHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 11 0111111111 1333333333221100000 024588999999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHHHH
Q 017527 265 ELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCI 313 (370)
Q Consensus 265 ~Lg~~l~~vv~~l~~~~~~~~~P~~VVlgGgv~~~~~~~~l~~~v~~~l 313 (370)
.+++.|.++...|. +|+.||++||+.+..+.+ .+.+.+.+
T Consensus 309 riak~Iga~aa~LG-------~vDaIVfTGGIgEns~~v--r~~I~~~l 348 (398)
T 4ijn_A 309 RLRKYIGAYMAVLG-------RTDVISFTAGVGENVPPV--RRDALAGL 348 (398)
T ss_dssp HHHHHHHHHHHHHS-------SCCEEEEEHHHHHHCHHH--HHHHHTTC
T ss_pred HHHHHHHHHHHHhC-------CCcEEEECCccccccHHH--HHHHHHHH
Confidence 99999999999994 289999999999754433 44444443
No 37
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=98.39 E-value=6.8e-07 Score=91.07 Aligned_cols=78 Identities=22% Similarity=0.241 Sum_probs=64.7
Q ss_pred cCCCcEEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEEEEecCCC------ccccCHHHHHHHHHHHHHHHHHHcCCC
Q 017527 18 SGGREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSN------HNSVGEDAARETIEKVMADALLKSGSN 91 (370)
Q Consensus 18 ~~~~~~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~~~~~~~n------~~~~~~~~~~~~l~~~i~~~l~~~~~~ 91 (370)
++.+.|+||||+|+|++|++++|. +|+++.+.+.+... ....+++++++.+.+++++++++.+.+
T Consensus 3 ~~~~~~~lgIDiGtts~k~~l~d~---------~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~i~~~i~~~~~~~~~~ 73 (508)
T 3ifr_A 3 LAQGRQVIGLDIGTTSTIAILVRL---------PDTVVAVASRPTTLSSPHPGWAEEDPAQWWDNARAVLAELKTTAGES 73 (508)
T ss_dssp ----CEEEEEEECSSEEEEEEEET---------TTEEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHHCGG
T ss_pred cccCCEEEEEEecCcceEEEEECC---------CCCEEEEEEEecceecCCCCceEECHHHHHHHHHHHHHHHHHhcCCC
Confidence 344569999999999999999998 89999987766532 123579999999999999999888877
Q ss_pred ccCcceEEEeecC
Q 017527 92 RSAVRAVCLAVSG 104 (370)
Q Consensus 92 ~~~v~~IgIgvpG 104 (370)
+.+|.+|||+.+|
T Consensus 74 ~~~I~~Igis~~~ 86 (508)
T 3ifr_A 74 DWRPGGICVTGML 86 (508)
T ss_dssp GCCEEEEEEEECS
T ss_pred hhheEEEEEECCC
Confidence 7899999999999
No 38
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=98.38 E-value=1.1e-06 Score=89.21 Aligned_cols=78 Identities=14% Similarity=0.162 Sum_probs=65.7
Q ss_pred cCCCcEEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEEEEecCCC------ccccCHHHHHHHHHHHHHHHHHHcCCC
Q 017527 18 SGGREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSN------HNSVGEDAARETIEKVMADALLKSGSN 91 (370)
Q Consensus 18 ~~~~~~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~~~~~~~n------~~~~~~~~~~~~l~~~i~~~l~~~~~~ 91 (370)
.+|+.|+||||+|+|++|++++|. +|+++.+.+.+... ....+++++++.+.+++++++++.+.+
T Consensus 2 ~aM~~~~lgIDiGtts~k~~l~d~---------~G~il~~~~~~~~~~~p~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~ 72 (501)
T 3g25_A 2 NAMEKYILSIDQGTTSSRAILFNQ---------KGEIAGVAQREFKQYFPQSGWVEHDANEIWTSVLAVMTEVINENDVR 72 (501)
T ss_dssp -CCCCEEEEEEECSSEEEEEEECT---------TSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHTTTCC
T ss_pred cccccEEEEEEeCccceEEEEEcC---------CCCEEEEEEeecccccCCCCcEEECHHHHHHHHHHHHHHHHHhcCCC
Confidence 457779999999999999999999 89999887765431 123579999999999999999988888
Q ss_pred ccCcceEEEeecC
Q 017527 92 RSAVRAVCLAVSG 104 (370)
Q Consensus 92 ~~~v~~IgIgvpG 104 (370)
+.+|.+|||+.++
T Consensus 73 ~~~I~~Igis~~~ 85 (501)
T 3g25_A 73 ADQIAGIGITNQR 85 (501)
T ss_dssp GGGEEEEEEEECS
T ss_pred cccEEEEEEECCc
Confidence 8899999999874
No 39
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=98.31 E-value=2e-06 Score=87.90 Aligned_cols=76 Identities=20% Similarity=0.201 Sum_probs=65.3
Q ss_pred CCcEEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEEEEecCCC------ccccCHHHHHHHHHHHHHHHHHHcCCCcc
Q 017527 20 GREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSN------HNSVGEDAARETIEKVMADALLKSGSNRS 93 (370)
Q Consensus 20 ~~~~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~~~~~~~n------~~~~~~~~~~~~l~~~i~~~l~~~~~~~~ 93 (370)
|+.|+||||+|+|++|++++|. +|+++.+.+.+... ....+++++++.+.+++++++++.+.++.
T Consensus 24 M~~~~lgIDiGtts~k~~l~d~---------~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~i~~~i~~~~~~~~~~~~ 94 (520)
T 4e1j_A 24 MGGYILAIDQGTTSTRAIVFDG---------NQKIAGVGQKEFKQHFPKSGWVEHDPEEIWQTVVSTVKEAIEKSGITAN 94 (520)
T ss_dssp CSCEEEEEEECSSEEEEEEECT---------TSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHTTTCCGG
T ss_pred hhCeEEEEEeCCcceEEEEECC---------CCCEEEEEEEecccccCCCCcEEECHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 4569999999999999999999 89999987665431 12357999999999999999998888888
Q ss_pred CcceEEEeecC
Q 017527 94 AVRAVCLAVSG 104 (370)
Q Consensus 94 ~v~~IgIgvpG 104 (370)
+|.+|||+.+|
T Consensus 95 ~I~~Igis~~g 105 (520)
T 4e1j_A 95 DIAAIGITNQR 105 (520)
T ss_dssp GEEEEEEEECS
T ss_pred cEEEEEEeCCc
Confidence 99999999998
No 40
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=98.29 E-value=2.2e-05 Score=73.39 Aligned_cols=127 Identities=13% Similarity=0.072 Sum_probs=86.0
Q ss_pred EEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEEEEecCCCccccCHHHHHHHHHHHHHHHHHHcCCCccCcceEEEee
Q 017527 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAV 102 (370)
Q Consensus 23 ~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~~~~~~~n~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~v~~IgIgv 102 (370)
++|+||+|+|++++++++. ++++.+.+.++. . .+.++.. ..+.++++..+.++++|.+|+|+.
T Consensus 3 MlL~IDIGNT~iK~gl~d~----------~~l~~~~r~~T~-~--~t~de~~----~~l~~ll~~~~~~~~~I~~iiISS 65 (266)
T 3djc_A 3 LILCIDVGNSHIYGGVFDG----------DEIKLRFRHTSK-V--STSDELG----IFLKSVLRENNCSPETIRKIAICS 65 (266)
T ss_dssp CEEEEEECSSEEEEEEEET----------TEEEEEEEEECS-C--CCHHHHH----HHHHHHHHTTTCCGGGCCEEEEEE
T ss_pred eEEEEEECCCeEEEEEEEC----------CEEEEEEEecCC-C--CCHHHHH----HHHHHHHHHcCCChhhceEEEEec
Confidence 6899999999999999997 688888877765 3 3566644 445556667777777899998888
Q ss_pred cCCCChhhHHHHHHHHHhhCCCCceEEE------------eC------hHHHHHHhhc--CCCCCeEEEEEcccceeeee
Q 017527 103 SGVNHPTDQQRILNWLRDIFPGNVRLYV------------HN------DALAALASGT--MGKLHGCVLIAGTGTIAYGF 162 (370)
Q Consensus 103 pG~~~~~~~~~l~~~L~~~f~~~~pV~V------------~N------Da~aa~~g~~--~g~~~~v~l~~GTGi~g~gi 162 (370)
+++ .-...+++.+++.|+. .|++| +| |-.+++++++ ++..+.+++-+||=+---.+
T Consensus 66 Vvp---~~~~~l~~~~~~~~~~-~~~~v~~~~~~g~~~~y~~P~~lG~DR~~~~vaA~~~~~~~~~iVVD~GTA~T~d~v 141 (266)
T 3djc_A 66 VVP---QVDYSLRSACVKYFSI-DPFLLQAGVKTGLNIKYRNPVEVGADRIANAIAATHSFPNQNIIVIDFGTATTFCAI 141 (266)
T ss_dssp SCH---HHHHHHHHHHHHHTCC-CCEECCSSSCCCCEECCSSGGGSCHHHHHHHHHHHHHSTTSEEEEEEESSEEEEEEE
T ss_pred chH---hHHHHHHHHHHHHcCC-CeEEEcCCCCCCcccCCCChhhhHHHHHHHHHHHHHhcCCCCEEEEECCCeeEEEEE
Confidence 764 3455677777777752 23333 23 4444554432 44357899999998743334
Q ss_pred ccCCceEe
Q 017527 163 TEDGRDAR 170 (370)
Q Consensus 163 i~dG~l~~ 170 (370)
..+|+...
T Consensus 142 ~~~g~~lG 149 (266)
T 3djc_A 142 SHKKAYLG 149 (266)
T ss_dssp CTTSEEEE
T ss_pred cCCCcEEE
Confidence 45566543
No 41
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=98.29 E-value=9.5e-06 Score=75.11 Aligned_cols=126 Identities=20% Similarity=0.216 Sum_probs=84.1
Q ss_pred CcEEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEEEEecCCCccccCHHHHHHHHHHHHHHHHHHcCCCccCcceEEE
Q 017527 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCL 100 (370)
Q Consensus 21 ~~~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~~~~~~~n~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~v~~IgI 100 (370)
..+.|.||+|+|++++++++. ++++.+.+.++... .+.++....+.++++. ...++.+|.|
T Consensus 2 ~~M~L~IDIGNT~ik~gl~~~----------~~l~~~~r~~T~~~--~t~de~~~~l~~l~~~-------~~~~i~~i~I 62 (249)
T 3bex_A 2 DPMYLLVDVGNTHSVFSITED----------GKTFRRWRLSTGVF--QTEDELFSHLHPLLGD-------AMREIKGIGV 62 (249)
T ss_dssp CCEEEEEEECSSEEEEEEESS----------SSSCEEEEEECCTT--CCHHHHHHHHHHHHGG-------GGGGEEEEEE
T ss_pred CceEEEEEECCCeEEEEEEEC----------CEEEEEEEecCCCC--CCHHHHHHHHHHHHhh-------ccccCCEEEE
Confidence 347899999999999999986 67887777665432 3567766666555543 2246777777
Q ss_pred eecCCCChhhHHHHHHHHHhhCCC----------CceEEEeC------hHHHHHHhhc--CCCCCeEEEEEcccceeeee
Q 017527 101 AVSGVNHPTDQQRILNWLRDIFPG----------NVRLYVHN------DALAALASGT--MGKLHGCVLIAGTGTIAYGF 162 (370)
Q Consensus 101 gvpG~~~~~~~~~l~~~L~~~f~~----------~~pV~V~N------Da~aa~~g~~--~g~~~~v~l~~GTGi~g~gi 162 (370)
+.++ |.....+.+.+++.|+. .+++..+| |-.+++++++ ++ .+.+++-+||.+-. -+
T Consensus 63 sSVv---p~~~~~~~~~~~~~~~~~p~~v~~~~~gl~~~y~~P~~lG~DR~~~~~aa~~~~~-~~~iVvD~GTA~T~-d~ 137 (249)
T 3bex_A 63 ASVV---PTQNTVIERFSQKYFHISPIWVKAKNGCVKWNVKNPSEVGADRVANVVAFVKEYG-KNGIIIDMGTATTV-DL 137 (249)
T ss_dssp EESC---HHHHHHHHHHHHHHHSCCCEECCCCSSSSEECSSCGGGSCHHHHHHHHHHHHHTC-SCEEEEEESSEEEE-EE
T ss_pred EcCc---HHHHHHHHHHHHHhcCCCeEEEEccCCCceeccCChhhcCHHHHHHHHHHHHHcC-CCEEEEEcCCceEE-EE
Confidence 7664 44445566666665531 13444566 6666666653 44 58999999999844 45
Q ss_pred ccCCceEe
Q 017527 163 TEDGRDAR 170 (370)
Q Consensus 163 i~dG~l~~ 170 (370)
+.+|+...
T Consensus 138 v~~g~~lG 145 (249)
T 3bex_A 138 VVNGSYEG 145 (249)
T ss_dssp EETTEEEE
T ss_pred EeCCeEee
Confidence 47887654
No 42
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=98.28 E-value=2.6e-06 Score=86.45 Aligned_cols=76 Identities=16% Similarity=0.178 Sum_probs=65.0
Q ss_pred CCcEEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEEEEecCCCc------cccCHHHHHHHHHHHHHHHHHHcCCCcc
Q 017527 20 GREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNH------NSVGEDAARETIEKVMADALLKSGSNRS 93 (370)
Q Consensus 20 ~~~~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~~~~~~~n~------~~~~~~~~~~~l~~~i~~~l~~~~~~~~ 93 (370)
|+.|+||||+|+|++|++++|. +|+++.+.+.+.+.. ...+++++++.+.+++++++++.+.++.
T Consensus 1 M~~~~lgiDiGtt~~k~~l~d~---------~g~~~~~~~~~~~~~~p~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~ 71 (497)
T 2zf5_O 1 MEKFVLSLDEGTTSARAIIFDR---------ESNIHGIGQYEFPQHYPRPGWVEHNPEEIWDAQLRAIKDAIQSARIEPN 71 (497)
T ss_dssp CCCEEEEEEECSSEEEEEEECT---------TCCEEEEEEEECCCBCCSTTCCEECHHHHHHHHHHHHHHHHHHHTCCGG
T ss_pred CCcEEEEEecCCchhEEEEECC---------CCCEEEEEEeccceecCCCCcEEECHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 3468999999999999999998 899998887765421 1247899999999999999998887778
Q ss_pred CcceEEEeecC
Q 017527 94 AVRAVCLAVSG 104 (370)
Q Consensus 94 ~v~~IgIgvpG 104 (370)
+|.+|||+.+|
T Consensus 72 ~i~~Igis~~~ 82 (497)
T 2zf5_O 72 QIAAIGVTNQR 82 (497)
T ss_dssp GEEEEEEEECS
T ss_pred cEEEEEEecCC
Confidence 89999999998
No 43
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=98.27 E-value=3.3e-06 Score=85.94 Aligned_cols=75 Identities=16% Similarity=0.266 Sum_probs=64.1
Q ss_pred CcEEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEEEEecCCC------ccccCHHHHHHHHHHHHHHHHHHcCCCccC
Q 017527 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSN------HNSVGEDAARETIEKVMADALLKSGSNRSA 94 (370)
Q Consensus 21 ~~~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~~~~~~~n------~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~ 94 (370)
+.|+||||+|+|++|++++|. +|+++.+.+.+... ....+++++++.+.+++++++++.+.++.+
T Consensus 4 ~~~~lgIDiGtts~k~~l~d~---------~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~~~~~~~~ 74 (506)
T 3h3n_X 4 KNYVMAIDQGTTSSRAIIFDR---------NGKKIGSSQKEFPQYFPKSGWVEHNANEIWNSVQSVIAGAFIESGIRPEA 74 (506)
T ss_dssp CCEEEEEEECSSEEEEEEEET---------TSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHHTCCGGG
T ss_pred CCEEEEEEcCCCceEEEEECC---------CCCEEEEEEEecCccCCCCCcEEECHHHHHHHHHHHHHHHHHHcCCChhh
Confidence 469999999999999999999 89999887665431 123579999999999999999988888889
Q ss_pred cceEEEeecC
Q 017527 95 VRAVCLAVSG 104 (370)
Q Consensus 95 v~~IgIgvpG 104 (370)
|.+|||+.++
T Consensus 75 I~~Igis~~~ 84 (506)
T 3h3n_X 75 IAGIGITNQR 84 (506)
T ss_dssp EEEEEEEECS
T ss_pred eEEEEeeCCc
Confidence 9999999875
No 44
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=98.25 E-value=2.4e-06 Score=86.84 Aligned_cols=75 Identities=12% Similarity=0.121 Sum_probs=62.9
Q ss_pred CcEEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEEEEecCCCc------cccCHHHHHHHHHHHHHHHHHHc--CCCc
Q 017527 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNH------NSVGEDAARETIEKVMADALLKS--GSNR 92 (370)
Q Consensus 21 ~~~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~~~~~~~n~------~~~~~~~~~~~l~~~i~~~l~~~--~~~~ 92 (370)
+.++||||+|+|++|++++|. +|+++.+.+.+.+.. ...+++++++.+.+++++++++. +.++
T Consensus 3 m~~~lgIDiGtT~~k~~l~d~---------~g~i~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~~~ 73 (503)
T 2w40_A 3 MNVILSIDQSTQSTKVFFYDE---------ELNIVHSNNLNHEQKCLKPGWYEHDPIEIMTNLYNLMNEGIKVLKDKYTS 73 (503)
T ss_dssp CEEEEEEEECSSEEEEEEEET---------TCCEEEEEEEECCCBCCSTTCCEECHHHHHHHHHHHHHHHHHHHHHHSSS
T ss_pred ccEEEEEEeCCcceEEEEECC---------CCCEEEEEEEeeeeecCCCCcEEECHHHHHHHHHHHHHHHHHHhhcCCCc
Confidence 468999999999999999998 899999887765421 12479999999999999998876 5656
Q ss_pred cCcceEEEeecC
Q 017527 93 SAVRAVCLAVSG 104 (370)
Q Consensus 93 ~~v~~IgIgvpG 104 (370)
.+|.+|||+.+|
T Consensus 74 ~~i~~Igis~~~ 85 (503)
T 2w40_A 74 VIIKCIGITNQR 85 (503)
T ss_dssp CEEEEEEEEECS
T ss_pred cceEEEEEcCCc
Confidence 789999999996
No 45
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=98.23 E-value=4e-06 Score=85.43 Aligned_cols=74 Identities=16% Similarity=0.197 Sum_probs=64.2
Q ss_pred cEEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEEEEecCCC------ccccCHHHHHHHHHHHHHHHHHHcCCCccCc
Q 017527 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSN------HNSVGEDAARETIEKVMADALLKSGSNRSAV 95 (370)
Q Consensus 22 ~~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~~~~~~~n------~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~v 95 (370)
.|+||||+|+|++|++++|. +|+++.+.+.+... ....+++++++.+.+++++++++.+.++.+|
T Consensus 3 ~~~lgIDiGtts~k~~l~d~---------~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~~~~~~~~I 73 (510)
T 2p3r_A 3 KYIVALDQGTTSSRAVVMDH---------DANIISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLVEVLAKADISSDQI 73 (510)
T ss_dssp CEEEEEEECSSEEEEEEECT---------TCCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHTTCCGGGE
T ss_pred cEEEEEEcCCcceEEEEECC---------CCCEEEEEEEecccccCCCCcEEECHHHHHHHHHHHHHHHHHHcCCChhhe
Confidence 48999999999999999999 89999887765431 1235799999999999999999988888899
Q ss_pred ceEEEeecC
Q 017527 96 RAVCLAVSG 104 (370)
Q Consensus 96 ~~IgIgvpG 104 (370)
.+|||+.++
T Consensus 74 ~~Igis~~~ 82 (510)
T 2p3r_A 74 AAIGITNQR 82 (510)
T ss_dssp EEEEEEECS
T ss_pred EEEEEeCCc
Confidence 999999987
No 46
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=98.20 E-value=3.7e-06 Score=85.26 Aligned_cols=74 Identities=22% Similarity=0.168 Sum_probs=63.0
Q ss_pred cEEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEEEEecCCC------ccccCHHHHHHHHHHHHHHHHHHcCCCccCc
Q 017527 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSN------HNSVGEDAARETIEKVMADALLKSGSNRSAV 95 (370)
Q Consensus 22 ~~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~~~~~~~n------~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~v 95 (370)
.|+||||+|+|++|++++|. +|+++.+.+.+.+. ....+++++++.+.+++++++++.+.++.+|
T Consensus 2 ~~~lgiDiGtT~~k~~l~d~---------~g~i~~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~~~i 72 (495)
T 2dpn_A 2 AFLLALDQGTTSSRAILFTL---------EGRPVAVAKREFRQLYPKPGWVEHDPLEIWETTLWAAREVLRRAGAEAGEV 72 (495)
T ss_dssp -CEEEEEECSSEEEEEEECT---------TSCEEEEEEEECCEECSSTTCCEECHHHHHHHHHHHHHHHHHHTTCCGGGC
T ss_pred cEEEEEeeCCcceEEEEECC---------CCCEEEEEEEeeceecCCCCcEeeCHHHHHHHHHHHHHHHHHhcCCCcccE
Confidence 48999999999999999998 89999887766532 1124799999999999999999888777889
Q ss_pred ceEEEeecC
Q 017527 96 RAVCLAVSG 104 (370)
Q Consensus 96 ~~IgIgvpG 104 (370)
.+|||+.+|
T Consensus 73 ~~Igis~~~ 81 (495)
T 2dpn_A 73 LALGITNQR 81 (495)
T ss_dssp CEEEEEECS
T ss_pred EEEEEeCCC
Confidence 999999996
No 47
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=98.18 E-value=0.00055 Score=63.07 Aligned_cols=134 Identities=18% Similarity=0.062 Sum_probs=86.8
Q ss_pred CcEEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEEEEecCCCc---cccCHHHHHHHHHHHHHHHHHHcCCCccCcce
Q 017527 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNH---NSVGEDAARETIEKVMADALLKSGSNRSAVRA 97 (370)
Q Consensus 21 ~~~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~~~~~~~n~---~~~~~~~~~~~l~~~i~~~l~~~~~~~~~v~~ 97 (370)
..+++|||+|++++|+++++. +++++.....++... .-.+.+.+.+.+..+++.+....+. .+..
T Consensus 27 ~~~~~gIDiGS~s~k~vi~~~---------~~~~l~~~~~~~~~l~~g~i~d~~~~~~~l~~~~~~~~~~~~~---~~~~ 94 (272)
T 3h1q_A 27 PPYKVGVDLGTADIVLVVTDQ---------EGIPVAGALKWASVVKDGLVVDYIGAIQIVRELKAKVERLLGS---ELFQ 94 (272)
T ss_dssp SCCEEEEECCSSEEEEEEECT---------TCCEEEEEEEECCCCBTTBCTTHHHHHHHHHHHHHHHHHHSSS---CCCE
T ss_pred CCEEEEEEcccceEEEEEECC---------CCcEEEEEeecccccCCCEEEcHHHHHHHHHHHHHHHHHhcCC---ccCe
Confidence 358999999999999999887 678887765443211 1122466667677777666655443 2345
Q ss_pred EEEeecCCCChhhHHHHHHHHHhhCCCCceEEEeChHHHHHHhhcCCCCCeEEEEEcccceeeeeccCCceEe
Q 017527 98 VCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGTMGKLHGCVLIAGTGTIAYGFTEDGRDAR 170 (370)
Q Consensus 98 IgIgvpG~~~~~~~~~l~~~L~~~f~~~~pV~V~NDa~aa~~g~~~g~~~~v~l~~GTGi~g~gii~dG~l~~ 170 (370)
+.+++|..........+.. ..+.++. ....+.++..|++.+. +..+.+++=+|.|+--..++.+|++..
T Consensus 95 ~v~tvp~~~~~~~~~~~~~-~~~~~g~-~~~~i~~e~~A~a~~~--~~~~~~viDiGggst~~~~~~~g~~~~ 163 (272)
T 3h1q_A 95 AATAIPPGTVGRNAEACGH-VVAGAGL-ELVTLVDEPVAAARAL--GINDGIVVDIGGGTTGIAVIEKGKITA 163 (272)
T ss_dssp EEEECCSCC---CTTHHHH-HHHHTTC-EEEEEECHHHHHHHHH--TCSSEEEEEECSSCEEEEEEETTEEEE
T ss_pred EEEEcCCCCCHHHHHHHHH-HHHHcCC-eeeecccHHHHHHHHH--cCCCEEEEEECCCcEEEEEEECCEEEE
Confidence 5677877543333333444 4455662 3477899999887643 445678888999986666667787653
No 48
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=98.17 E-value=6.3e-06 Score=83.74 Aligned_cols=74 Identities=16% Similarity=0.208 Sum_probs=63.9
Q ss_pred cEEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEEEEecCCCc------cccCHHHHHHHHHHHHHHHHHHcCCCccCc
Q 017527 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNH------NSVGEDAARETIEKVMADALLKSGSNRSAV 95 (370)
Q Consensus 22 ~~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~~~~~~~n~------~~~~~~~~~~~l~~~i~~~l~~~~~~~~~v 95 (370)
.|+||||+|+|++|++++|. +|+++.+.+.+.+.. ...+++++++.+.+++++++++.+.++.+|
T Consensus 2 ~~~lgiDiGtts~k~~l~d~---------~G~i~~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~~~i 72 (504)
T 2d4w_A 2 DYVLAIDQGTTSSRAIVFDH---------SGEIYSTGQLEHDQIFPRAGWVEHNPEQIWNNVREVVGLALTRGNLTHEDI 72 (504)
T ss_dssp CEEEEEEECSSEEEEEEECT---------TSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHTTCCGGGE
T ss_pred CEEEEEecCCcceEEEEECC---------CCCEEEEEEEecceecCCCCceeECHHHHHHHHHHHHHHHHHHcCCCcccE
Confidence 48999999999999999998 899998887665431 124799999999999999999888777889
Q ss_pred ceEEEeecC
Q 017527 96 RAVCLAVSG 104 (370)
Q Consensus 96 ~~IgIgvpG 104 (370)
.+|||+.+|
T Consensus 73 ~~Igis~~g 81 (504)
T 2d4w_A 73 AAVGITNQR 81 (504)
T ss_dssp EEEEEEECS
T ss_pred EEEEEeCCC
Confidence 999999998
No 49
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=98.14 E-value=7.5e-06 Score=83.39 Aligned_cols=76 Identities=13% Similarity=0.032 Sum_probs=63.3
Q ss_pred CCcEEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEEEEecCCC------ccccCHHHHHHHHHHHHHHHHHHcCCCcc
Q 017527 20 GREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSN------HNSVGEDAARETIEKVMADALLKSGSNRS 93 (370)
Q Consensus 20 ~~~~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~~~~~~~n------~~~~~~~~~~~~l~~~i~~~l~~~~~~~~ 93 (370)
|+.|+||||+|+|++|++++|. +|+++.+.+.+... ....+++++++.+.+++++++ +.+.++.
T Consensus 3 mm~~~lgIDiGtts~k~~l~d~---------~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~-~~~~~~~ 72 (511)
T 3hz6_A 3 LAFYIATFDIGTTEVKAALADR---------DGGLHFQRSIALETYGDGNGPVEQDAGDWYDAVQRIASSWW-QSGVDAR 72 (511)
T ss_dssp CCCEEEEEEECSSEEEEEEECT---------TSCEEEEEEEECCCBSTTSSCCEECHHHHHHHHHHHHHHHH-TTTCCGG
T ss_pred cccEEEEEEeCCCceEEEEECC---------CCCEEEEEEeecceecCCCCCEEECHHHHHHHHHHHHHHHH-hcCCChh
Confidence 4569999999999999999999 89999887665431 123579999999999999999 7777778
Q ss_pred CcceEEEeecCC
Q 017527 94 AVRAVCLAVSGV 105 (370)
Q Consensus 94 ~v~~IgIgvpG~ 105 (370)
+|.+|||+..+.
T Consensus 73 ~I~~Igis~q~~ 84 (511)
T 3hz6_A 73 RVSAIVLSGQMQ 84 (511)
T ss_dssp GEEEEEEEECCS
T ss_pred HeEEEEEecccc
Confidence 899999997663
No 50
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=98.07 E-value=1.1e-05 Score=83.02 Aligned_cols=73 Identities=14% Similarity=0.191 Sum_probs=61.6
Q ss_pred CcEEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEEEEecCC------CccccCHHHHHHHHHHHHHHHHHHcCCCccC
Q 017527 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCS------NHNSVGEDAARETIEKVMADALLKSGSNRSA 94 (370)
Q Consensus 21 ~~~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~~~~~~~------n~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~ 94 (370)
+.|+||||+|+|++|++++|. +|+++.+.+.+.. .....+++++++.+.+++++++++.+.++.+
T Consensus 4 ~~~~lgIDiGtts~ka~l~d~---------~G~il~~~~~~~~~~~p~~g~~eqdp~~~~~~~~~~i~~~~~~~~~~~~~ 74 (554)
T 3l0q_A 4 ASYFIGVDVGTGSARAGVFDL---------QGRMVGQASREITMFKPKADFVEQSSENIWQAVCNAVRDAVNQADINPIQ 74 (554)
T ss_dssp CCEEEEEEECSSEEEEEEEET---------TSCEEEEEEEECCCEEEETTEEEECHHHHHHHHHHHHHHHHHHHTCCGGG
T ss_pred CcEEEEEEECcccEEEEEECC---------CCCEEEEEEEecccccCCCCccccCHHHHHHHHHHHHHHHHHHcCCCHhH
Confidence 459999999999999999998 8999988766532 1123579999999999999999988888888
Q ss_pred cceEEEee
Q 017527 95 VRAVCLAV 102 (370)
Q Consensus 95 v~~IgIgv 102 (370)
|.+|||+-
T Consensus 75 I~~Igis~ 82 (554)
T 3l0q_A 75 VKGLGFDA 82 (554)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEcC
Confidence 99999853
No 51
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=97.97 E-value=2.5e-05 Score=79.81 Aligned_cols=75 Identities=16% Similarity=0.205 Sum_probs=62.8
Q ss_pred CcEEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEEEEecCC------CccccCHHHHHHHHHHHHHHHHHHcCCCccC
Q 017527 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCS------NHNSVGEDAARETIEKVMADALLKSGSNRSA 94 (370)
Q Consensus 21 ~~~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~~~~~~~------n~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~ 94 (370)
.+|+||||+|+|++|++++|. +|+++...+.+.. ....++++++.+.+.+++++++++++.++.+
T Consensus 3 kkYvlgID~GTss~Ka~l~d~---------~G~~va~~~~~~~~~~p~~G~~Eqdp~~~w~~~~~~i~~~l~~~~~~~~~ 73 (526)
T 3ezw_A 3 KKYIVALDQGTTSSRAVVMDH---------DANIISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLVEVLAKADISSDQ 73 (526)
T ss_dssp CCEEEEEEECSSEEEEEEECT---------TCCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHHTCCGGG
T ss_pred ceEEEEEEccccceeeeEEcC---------CCCEEEEEEEecCcccCCCCcEEECHHHHHHHHHHHHHHHHHHcCCChhh
Confidence 469999999999999999998 8999987655422 1122479999999999999999999999999
Q ss_pred cceEEEeecC
Q 017527 95 VRAVCLAVSG 104 (370)
Q Consensus 95 v~~IgIgvpG 104 (370)
|.+|||+--+
T Consensus 74 I~aIgis~q~ 83 (526)
T 3ezw_A 74 IAAIGITNQR 83 (526)
T ss_dssp EEEEEEEECS
T ss_pred EEEEEEeCCC
Confidence 9999987544
No 52
>3r9p_A ACKA; ssgcid, seattle structural genomics center for infectious DI acetate kinase, transferase; HET: PGE; 1.90A {Mycobacterium avium subsp} PDB: 3p4i_A 4dq8_A
Probab=97.94 E-value=0.0038 Score=60.84 Aligned_cols=247 Identities=17% Similarity=0.149 Sum_probs=139.0
Q ss_pred EEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEEEEecCC---CccccCHHHHHHHHHHHHHHHHHHcCCC--ccCcce
Q 017527 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCS---NHNSVGEDAARETIEKVMADALLKSGSN--RSAVRA 97 (370)
Q Consensus 23 ~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~~~~~~~---n~~~~~~~~~~~~l~~~i~~~l~~~~~~--~~~v~~ 97 (370)
-+|.+..|.+++|+.+++.. +.+++.+.....- .....+-+++++.|.+.+. +.+.. .+++.+
T Consensus 13 ~iLviN~GSSSlK~~l~~~~--------~~~~l~~G~~e~ig~~~~~~~~h~~a~~~il~~L~----~~~~~~~~~~i~a 80 (391)
T 3r9p_A 13 RVLVINSGSSSLKFQLVDPE--------FGVAASTGIVERIGEESSPVPDHDAALRRAFDMLA----GDGVDLNTAGLVA 80 (391)
T ss_dssp EEEEEEECSSCEEEEEEETT--------TTEEEEEEEECCTTCTTCSCCSHHHHHHHHHHHHH----HTTCCTTTTTEEE
T ss_pred eEEEEecCchhheeEEEecC--------CCceEEEEEEeecCCCccCccCHHHHHHHHHHHHH----hcCCCCcccceeE
Confidence 48999999999999999862 3566666544321 1111234555665555443 44433 357888
Q ss_pred EEEe-ecCC--------CChhhH---------------HHH--HHHHHhhCCCCce-EEEeChHH-------HHHHh---
Q 017527 98 VCLA-VSGV--------NHPTDQ---------------QRI--LNWLRDIFPGNVR-LYVHNDAL-------AALAS--- 140 (370)
Q Consensus 98 IgIg-vpG~--------~~~~~~---------------~~l--~~~L~~~f~~~~p-V~V~NDa~-------aa~~g--- 140 (370)
||.= |.|= +++.-- .+| ....++.||+ +| |+|-.-+. +...+
T Consensus 81 VGhRvVhGG~~f~~~~~I~~~vl~~l~~~~~lAPLHnp~nL~gI~a~~~~~P~-~p~VavFDTaFh~tmp~~A~~y~lP~ 159 (391)
T 3r9p_A 81 VGHRVVHGGNTFYRPTVLDDAVIARLHELSELAPLHNPPALQGIEVARRLLPD-IAHVAVFDTGFFHDLPPAAATYAIDR 159 (391)
T ss_dssp EEEEESCCTTTCCSCEECCHHHHHHHHTTGGGSTTTHHHHHHHHHHHHHHCTT-SEEEEEETTGGGTTCCHHHHCCSSCH
T ss_pred EecCCCCCCCCCCCCEECcHHHHHHHHhcCcCCcccCHHHHHHHHHHHHHCCC-CCEEEEECChhhccccHHHHHcCCCH
Confidence 8752 3442 121110 011 2335677875 78 56554331 11000
Q ss_pred --------------------------hcCCC----CCeEEEEEcccceeeeeccCCceEe-----eCCCCCCcCCCCchH
Q 017527 141 --------------------------GTMGK----LHGCVLIAGTGTIAYGFTEDGRDAR-----AAGAGPILGDWGSGY 185 (370)
Q Consensus 141 --------------------------~~~g~----~~~v~l~~GTGi~g~gii~dG~l~~-----aGg~G~llgd~Gs~~ 185 (370)
+..|. .+.|++.+|.|+.. .-+.+|+... ...-|.+.+...+
T Consensus 160 e~~~~~giRryGFHGlS~~yva~r~a~~lgk~~~~~~lIv~HLGnGaSv-~Ai~~GksvDtsmG~tpleGl~mgtRsG-- 236 (391)
T 3r9p_A 160 ELADRWQIRRYGFHGTSHRYVSEQAAAFLDRPLRGLKQIVLHLGNGCSA-SAIAGTRPLDTSMGLTPLEGLVMGTRSG-- 236 (391)
T ss_dssp HHHHHTTCSCCCSCHHHHHHHHHHHHHHTTSCGGGCEEEEEEESSSEEE-EEEETTEEEEESCCSSTTSSSCCSSCCC--
T ss_pred HHHHhcCceEeceeHHhHHHHHHHHHHHhCCChHHcCEEEEEeCCCcEe-EEEECCEEEeeCCCCCcccCCCCCCCCC--
Confidence 11232 37899999999844 5568999863 1133444332211
Q ss_pred HHHHHHHHHHHHHHcCCCCCchhHHHHHHHcCCCChhhHHHHhccCCChHHH--hhhHHHHHHHHhcCCHHHHHHHHHHH
Q 017527 186 GIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDPSWARI--AALVPVVVSCAEAGDEVANKILQDSV 263 (370)
Q Consensus 186 ~iG~~~~~~~~~~~dg~~~~~~l~~~~~~~~~~~s~~~l~~~~~~~~~~~~~--a~~~~~v~~~A~~GD~~A~~il~~a~ 263 (370)
..++..+ -.+.+..+. +.+++...++++.....+ ....++|.+++++||+.|+.+++-++
T Consensus 237 ----------------diDp~~l-~~l~~~~g~-s~~ei~~~Lnk~SGLlglsG~~D~R~v~~~~~~gd~~A~lA~d~f~ 298 (391)
T 3r9p_A 237 ----------------DIDPSIV-SYLCHTAGM-GVDDVESMLNHRSGVVGLSGVRDFRRLRELIESGDGAAQLAYSVFT 298 (391)
T ss_dssp ----------------SCCTHHH-HHHHHHSCC-CHHHHHHHHHHSCHHHHHHSCSCSHHHHHHHHTTCHHHHHHHHHHH
T ss_pred ----------------CCChHHH-HHHHHhcCC-CHHHHHHHHHhccCceeecCCCCHHHHHHHHHCCCHHHHHHHHHHH
Confidence 0111111 112222221 334444333321100000 02457899999999999999999999
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHHH
Q 017527 264 EELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKC 312 (370)
Q Consensus 264 ~~Lg~~l~~vv~~l~~~~~~~~~P~~VVlgGgv~~~~~~~~l~~~v~~~ 312 (370)
..+++.|.++...|+ .++.||+.||+.+..+.+ .+.+.+.
T Consensus 299 yri~k~Iga~aa~Lg-------~vDaIVfTGGIgens~~v--R~~i~~~ 338 (391)
T 3r9p_A 299 HRLRKYIGAYLAVLG-------HTDVISFTAGIGENDAAV--RRDAVSG 338 (391)
T ss_dssp HHHHHHHHHHHHHHS-------SCCEEEEEHHHHHHCHHH--HHHHHTT
T ss_pred HHHHHHHHHHHHHhC-------CCCEEEECcccccCCHHH--HHHHHHH
Confidence 999999999999995 279999999999854333 4444433
No 53
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=97.94 E-value=2.2e-05 Score=79.34 Aligned_cols=71 Identities=15% Similarity=0.131 Sum_probs=58.8
Q ss_pred EEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEEEEecCCC------ccccCHHHHHHHHHHHHHHHHHHcCCCccCcc
Q 017527 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSN------HNSVGEDAARETIEKVMADALLKSGSNRSAVR 96 (370)
Q Consensus 23 ~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~~~~~~~n------~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~v~ 96 (370)
++||||+|+|++|++++|. +|+++.+.+.+.+. ....+++++++.+.+++++++++.. +.+|.
T Consensus 1 ~~lgiDiGtt~~k~~l~d~---------~g~~l~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~~~--~~~i~ 69 (484)
T 2itm_A 1 MYIGIDLGTSGVKVILLNE---------QGEVVAAQTEKLTVSRPHPLWSEQDPEQWWQATDRAMKALGDQHS--LQDVK 69 (484)
T ss_dssp CEEEEEECSSEEEEEEECT---------TSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHSC--CTTCC
T ss_pred CEEEEEecCcccEEEEECC---------CCCEEEEEEeccccccCCCCCEeECHHHHHHHHHHHHHHHHHhCC--ccceE
Confidence 4799999999999999998 89999988665431 1124789999999999999987753 45799
Q ss_pred eEEEeecC
Q 017527 97 AVCLAVSG 104 (370)
Q Consensus 97 ~IgIgvpG 104 (370)
+|||+.+|
T Consensus 70 ~Igis~~~ 77 (484)
T 2itm_A 70 ALGIAGQM 77 (484)
T ss_dssp EEEEEECS
T ss_pred EEEEcCCc
Confidence 99999999
No 54
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=97.82 E-value=4.4e-05 Score=78.78 Aligned_cols=76 Identities=14% Similarity=0.135 Sum_probs=59.7
Q ss_pred CcEEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEEEEecCCC-----------------ccccCHHHHHHHHHHHHHH
Q 017527 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSN-----------------HNSVGEDAARETIEKVMAD 83 (370)
Q Consensus 21 ~~~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~~~~~~~n-----------------~~~~~~~~~~~~l~~~i~~ 83 (370)
+.|+||||+|+|++|++++|.. +|+++.+...+.++ ....+++++++.+.+++++
T Consensus 4 ~~~~lgIDiGTts~Ka~l~d~~--------~G~i~~~~~~~~~~~~~~~~~p~~~~~~~~g~~eqdp~~~~~~~~~~i~~ 75 (572)
T 3jvp_A 4 TKYTIGVDYGTESGRAVLIDLS--------NGQELADHVTPYRHGVIDQYLPNTNIKLGHEWALQHPLDYVEVLTTSVPA 75 (572)
T ss_dssp -CEEEEEEECSSEEEEEEEETT--------TCCEEEEEEEECTTCCBSSBSTTSCCBCCTTCCEECHHHHHHHHTTHHHH
T ss_pred CCEEEEEecCCcceEEEEEECC--------CCeEEEEEEeccCCccccccCCccccCCCCCcEEECHHHHHHHHHHHHHH
Confidence 4599999999999999999951 59999887765431 1235788999999999999
Q ss_pred HHHHcCCCccCcceEEEeecC
Q 017527 84 ALLKSGSNRSAVRAVCLAVSG 104 (370)
Q Consensus 84 ~l~~~~~~~~~v~~IgIgvpG 104 (370)
++++++..+.+|.+|||+.-+
T Consensus 76 ~l~~~~~~~~~I~~Igis~q~ 96 (572)
T 3jvp_A 76 VMKESGVDADDVIGIGVDFTA 96 (572)
T ss_dssp HHHC---CCSCEEEEEEEECS
T ss_pred HHHHcCCChhHEEEEEEecCC
Confidence 999888777899999998854
No 55
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=97.81 E-value=6.4e-05 Score=76.37 Aligned_cols=72 Identities=17% Similarity=0.217 Sum_probs=59.6
Q ss_pred cEEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEEEEecCCC------ccccCHHHHHHHHHHHHHHHHHHcCCCccCc
Q 017527 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSN------HNSVGEDAARETIEKVMADALLKSGSNRSAV 95 (370)
Q Consensus 22 ~~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~~~~~~~n------~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~v 95 (370)
.|+||||+|+|++|++++|. +|+++.+.+.+.+. ....+++++.+.+.+++++++++.+ .+|
T Consensus 4 ~~~lgIDiGtts~K~~l~d~---------~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~~~---~~I 71 (504)
T 3ll3_A 4 KYIIGMDVGTTATKGVLYDI---------NGKAVASVSKGYPLIQTKVGQAEEDPKLIFDAVQEIIFDLTQKID---GKI 71 (504)
T ss_dssp EEEEEEEECSSEEEEEEEET---------TSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHTCS---SEE
T ss_pred CEEEEEEecCCceEEEEEcC---------CCCEEEEEEeecceecCCCCcEEECHHHHHHHHHHHHHHHHHhCC---CCe
Confidence 59999999999999999999 89999988765431 1235799999999999999988765 579
Q ss_pred ceEEEeecCC
Q 017527 96 RAVCLAVSGV 105 (370)
Q Consensus 96 ~~IgIgvpG~ 105 (370)
.+|||+.-+.
T Consensus 72 ~~Igis~q~~ 81 (504)
T 3ll3_A 72 AAISWSSQMH 81 (504)
T ss_dssp EEEEEEECSS
T ss_pred EEEEEECCCC
Confidence 9999988654
No 56
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=97.72 E-value=5.6e-05 Score=76.44 Aligned_cols=71 Identities=11% Similarity=0.039 Sum_probs=54.3
Q ss_pred CCCcEEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEEEEecCCC-----ccccCHHHHHHHHHHHHHHHHHHcCCCcc
Q 017527 19 GGREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSN-----HNSVGEDAARETIEKVMADALLKSGSNRS 93 (370)
Q Consensus 19 ~~~~~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~~~~~~~n-----~~~~~~~~~~~~l~~~i~~~l~~~~~~~~ 93 (370)
+|+.|+||||+|+|++|++++|. +|+++.+.+.+... ....+++++.+.+.+++++++ + .
T Consensus 3 ~mm~~~lgIDiGTts~Ka~l~d~---------~G~i~~~~~~~~~~~~~~g~~eqdp~~~~~~~~~~i~~~~-~-----~ 67 (482)
T 3h6e_A 3 LSTGATIVIDLGKTLSKVSLWDL---------DGRMLDRQVRPSIPLEIDGIRRLDAPDTGRWLLDVLSRYA-D-----H 67 (482)
T ss_dssp -----CEEEEECSSEEEEEEECT---------TSCEEEEEEEECCCEESSSCEECCHHHHHHHHHHHHHHTT-T-----S
T ss_pred hhhceEEEEEcCCCCeEEEEEEC---------CCcEEEEEEecCCcccCCCceeECHHHHHHHHHHHHHHHH-h-----c
Confidence 35679999999999999999998 89999887766531 112478999999999988876 2 5
Q ss_pred CcceEEEeecC
Q 017527 94 AVRAVCLAVSG 104 (370)
Q Consensus 94 ~v~~IgIgvpG 104 (370)
+|.+|||+..+
T Consensus 68 ~I~aIgis~~~ 78 (482)
T 3h6e_A 68 PVTTIVPVGHG 78 (482)
T ss_dssp CCCEEEEEECS
T ss_pred CCCEEEEecCc
Confidence 79999999876
No 57
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=97.70 E-value=0.0012 Score=61.48 Aligned_cols=127 Identities=19% Similarity=0.123 Sum_probs=84.1
Q ss_pred EEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEEEEecCCCccccCHHHHHHHHHHHHHHHHHHcCCCccCcceEEEee
Q 017527 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAV 102 (370)
Q Consensus 23 ~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~~~~~~~n~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~v~~IgIgv 102 (370)
++|.||+|.|++++++++. ++++...+..+... .+.++.... +.++++..+.++.++.++.|+.
T Consensus 1 MlL~IDIGNT~ik~gl~~~----------~~l~~~~r~~T~~~--~t~de~~~~----l~~ll~~~~~~~~~i~~iiISS 64 (268)
T 2h3g_X 1 MIFVLDVGNTNAVLGVFEE----------GELRQHWRMETDRH--KTEDEYGML----VKQLLEHEGLSFEDVKGIIVSS 64 (268)
T ss_dssp CEEEEEECSSEEEEEEEET----------TEEEEEEEEECCTT--CCHHHHHHH----HHHHHHHTTCCGGGCCEEEEEE
T ss_pred CEEEEEECcCcEEEEEEEC----------CEEEEEEEecCCCc--CCHHHHHHH----HHHHHHHcCCCcccCcEEEEEc
Confidence 3689999999999999997 67887777665433 245655444 4556666677667788877765
Q ss_pred cCCCChhhHHHHHHHHHhhCCCCceEEEe------------C------hHHHHHHhh--cCCCCCeEEEEEcccceeeee
Q 017527 103 SGVNHPTDQQRILNWLRDIFPGNVRLYVH------------N------DALAALASG--TMGKLHGCVLIAGTGTIAYGF 162 (370)
Q Consensus 103 pG~~~~~~~~~l~~~L~~~f~~~~pV~V~------------N------Da~aa~~g~--~~g~~~~v~l~~GTGi~g~gi 162 (370)
+ + |.-...+.+.+++.|+. .|++|. | |-.++++++ .++ .+.++|-+||=+---.+
T Consensus 65 V--v-p~~~~~l~~~~~~~~~~-~~~~v~~~~~~gl~~~y~~P~~lG~DR~~~~vaA~~~~~-~~~iVVD~GTAtT~d~v 139 (268)
T 2h3g_X 65 V--V-PPIMFALERMCEKYFKI-KPLVVGPGIKTGLNIKYENPREVGADRIVNAVAGIHLYG-SPLIIVDFGTATTYCYI 139 (268)
T ss_dssp S--C-HHHHHHHHHHHHHHTCC-CCEECSTTCCCCCEECSSCGGGSCHHHHHHHHHHHHHHC-SSEEEEEESSEEEEEEE
T ss_pred c--C-hhHHHHHHHHHHHHhCC-CeEEEcCCCCCCccccCCChhhcCHHHHHHHHHHHHhcC-CCEEEEECCCceEEEEE
Confidence 4 4 65667788888888862 344431 1 223344443 245 58999999999854434
Q ss_pred ccCCceEe
Q 017527 163 TEDGRDAR 170 (370)
Q Consensus 163 i~dG~l~~ 170 (370)
..+|+...
T Consensus 140 ~~~g~~lG 147 (268)
T 2h3g_X 140 NEEKHYMG 147 (268)
T ss_dssp CTTSEEEE
T ss_pred CCCCcEEE
Confidence 45676543
No 58
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=97.69 E-value=0.00012 Score=74.66 Aligned_cols=71 Identities=17% Similarity=0.130 Sum_probs=56.4
Q ss_pred CCcEEEEEEcCccceEEEEEe-CCCCCCCCCCCCCeEEEEEecCCCccccCHHHHHHHHHHHHHHHHHHcCCCccCcceE
Q 017527 20 GREVILGLDGGTTSTVCICMP-VISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAV 98 (370)
Q Consensus 20 ~~~~vlGVDiGgT~i~~~l~d-~~~~~~~~~~~g~il~~~~~~~~n~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~v~~I 98 (370)
.+.|+||||+|+|++|++++| . +|+++.+.+.+.+.....+++++.+.+.+++++ .+. ..+|.+|
T Consensus 3 ~~~~~lgIDiGtts~ka~l~d~~---------~G~i~~~~~~~~~g~~e~d~~~~~~~i~~~l~~----~~~-~~~I~~I 68 (515)
T 3i8b_A 3 LRTLVAGVDTSTQSCKVRVTDAE---------TGELVRFGQAKHPNGTSVDPSYWWSAFQEAAEQ----AGG-LDDVSAL 68 (515)
T ss_dssp CSCEEEEEEECSSEEEEEEEETT---------TCCEEEEEEEECCSSSEECTHHHHHHHHHHHHH----TTC-STTEEEE
T ss_pred CCcEEEEEEeccccEEEEEEECC---------CCeEEEEEEEeCCCCceECHHHHHHHHHHHHHh----cCC-ccCceEE
Confidence 356999999999999999999 7 799999887776543345788888887776654 343 4689999
Q ss_pred EEeecC
Q 017527 99 CLAVSG 104 (370)
Q Consensus 99 gIgvpG 104 (370)
||+..+
T Consensus 69 gis~q~ 74 (515)
T 3i8b_A 69 AVGGQQ 74 (515)
T ss_dssp EEEECS
T ss_pred EEeCCc
Confidence 999887
No 59
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=97.62 E-value=0.043 Score=52.34 Aligned_cols=120 Identities=13% Similarity=0.159 Sum_probs=76.6
Q ss_pred EEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEEEEecCCCcc-ccCHH----HHHHHHHHHHHHHHHHcCCCccCcce
Q 017527 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHN-SVGED----AARETIEKVMADALLKSGSNRSAVRA 97 (370)
Q Consensus 23 ~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~~~~~~~n~~-~~~~~----~~~~~l~~~i~~~l~~~~~~~~~v~~ 97 (370)
++||||.+.+.+.+++++. ++++........... ...|+ .-.+.+..+|++++++++++.+++.+
T Consensus 2 ~iLgIdts~~~~~val~~~----------g~i~~~~~~~~~~~~gg~~p~~~~~~h~~~l~~~i~~~L~~agi~~~did~ 71 (330)
T 2ivn_A 2 LALGIEGTAHTLGIGIVSE----------DKVLANVFDTLTTEKGGIHPKEAAEHHARLMKPLLRKALSEAGVSLDDIDV 71 (330)
T ss_dssp CEEEEECSSSEEEEEEECS----------SCEEEEEEEECCCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHTCCTTTCCE
T ss_pred EEEEEEccCCCeEEEEEEC----------CEEEEEEEEEeecccCCcCchhhHHHHHHHHHHHHHHHHHHcCCCHHHCcE
Confidence 5899999999999999986 688866543211110 11233 34566778999999999999999999
Q ss_pred EEEee-cCCCCh-hhHHHHHHHHHhhCCCCceEEEeChHHHHHHhhcC-CC-CCeEEEEEc
Q 017527 98 VCLAV-SGVNHP-TDQQRILNWLRDIFPGNVRLYVHNDALAALASGTM-GK-LHGCVLIAG 154 (370)
Q Consensus 98 IgIgv-pG~~~~-~~~~~l~~~L~~~f~~~~pV~V~NDa~aa~~g~~~-g~-~~~v~l~~G 154 (370)
|+++. ||.... .-...+.+.|...++ .|++-.|--.|-+++..+ +. ...+++..|
T Consensus 72 Ia~~~GPG~~~~lrvg~~~ak~la~~~~--~pl~~v~h~~aHa~~a~~~~~~~~~~l~v~G 130 (330)
T 2ivn_A 72 IAFSQGPGLGPALRVVATAARALAVKYR--KPIVGVNHCIAHVEITKMFGVKDPVGLYVSG 130 (330)
T ss_dssp EEEEEESSCHHHHHHHHHHHHHHHHHTT--CCEEEEEHHHHHHHGGGGGTCCSCEEEEECS
T ss_pred EEEECCCCchHHHHHHHHHHHHHHHHcC--CCEEeeCcHHHHHHHHhhcCCCCCeEEEEcC
Confidence 98752 543210 112345566666776 898877776665554433 21 234445555
No 60
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=97.48 E-value=0.00012 Score=73.74 Aligned_cols=73 Identities=8% Similarity=-0.011 Sum_probs=53.5
Q ss_pred cEEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEEEEecC----------CCccccCHHHHHHHHHHHHHHHHHHcCCC
Q 017527 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGC----------SNHNSVGEDAARETIEKVMADALLKSGSN 91 (370)
Q Consensus 22 ~~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~~~~~~----------~n~~~~~~~~~~~~l~~~i~~~l~~~~~~ 91 (370)
.++||||+|+|++|++++|. +|+++.....+. ......+++++++.+.++++++...
T Consensus 4 ~~~lgiDiGtts~k~~l~d~---------~g~~~~~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~~~~~~~~---- 70 (489)
T 2uyt_A 4 RNCVAVDLGASSGRVMLARY---------ERECRSLTLREIHRFNNGLHSQNGYVTWDVDSLESAIRLGLNKVCAA---- 70 (489)
T ss_dssp EEEEEEEECSSEEEEEEEEE---------EGGGTEEEEEEEEEEECCCEEETTEEECCHHHHHHHHHHHHHHHHHT----
T ss_pred ceEEEEEecCCCceEEEEEe---------cCccceEEEEEEeecCCCccccCCeEEECHHHHHHHHHHHHHHHHhC----
Confidence 47999999999999999998 688776543221 1111236889999999999887652
Q ss_pred ccCcceEEEee----cCCCC
Q 017527 92 RSAVRAVCLAV----SGVNH 107 (370)
Q Consensus 92 ~~~v~~IgIgv----pG~~~ 107 (370)
..+|.+|||+. +++.|
T Consensus 71 ~~~i~~Igis~q~~~~v~~D 90 (489)
T 2uyt_A 71 GIAIDSIGIDTWGVDFVLLD 90 (489)
T ss_dssp TCCCCEEEEEECSSCEEEEC
T ss_pred CCCceEEEEecCcccEEEEC
Confidence 24799999998 66544
No 61
>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A*
Probab=97.17 E-value=0.1 Score=51.17 Aligned_cols=65 Identities=17% Similarity=0.173 Sum_probs=54.0
Q ss_pred hHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHHHH
Q 017527 240 LVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCI 313 (370)
Q Consensus 240 ~~~~v~~~A~~GD~~A~~il~~a~~~Lg~~l~~vv~~l~~~~~~~~~P~~VVlgGgv~~~~~~~~l~~~v~~~l 313 (370)
..++|.+++.+||+.|+.+++-++..+.+.|.++...++- .+.||+.||+.+..+.+ .+.+.+.+
T Consensus 291 D~R~l~~~~~~Gd~~A~lA~d~f~yri~k~IGa~aa~Lgg-------vDaIVFTgGIGEns~~v--R~~i~~~l 355 (415)
T 2e1z_A 291 DLRVLEKAWHEGHERARLAIKTFVHRIARHIAGHAASLHR-------LDGIIFTGGIGENSVLI--RQLVIEHL 355 (415)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTTCSS-------CCEEEEEHHHHHHCHHH--HHHHHHTT
T ss_pred CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHhCC-------CCEEEECccccccCHHH--HHHHHhhH
Confidence 4588888889999999999999999999999999998862 68999999999765443 55555544
No 62
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=97.09 E-value=0.00072 Score=69.11 Aligned_cols=73 Identities=18% Similarity=0.169 Sum_probs=51.4
Q ss_pred CcEEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEEEEecCC----C------cc-------ccCHH-HHHHHHHHHHH
Q 017527 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCS----N------HN-------SVGED-AARETIEKVMA 82 (370)
Q Consensus 21 ~~~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~~~~~~~----n------~~-------~~~~~-~~~~~l~~~i~ 82 (370)
+.|+||||+|+|++|++++|. +|+++.+...+.. . .. .++++ ...+.+..+.
T Consensus 9 ~~~~lgID~GTts~Ka~l~d~---------~G~vv~~~~~~~~~~~p~~~~~~g~~e~~~g~~eqdp~~~w~~~~~~~~- 78 (538)
T 4bc3_A 9 RRCCLGWDFSTQQVKVVAVDA---------ELNVFYEESVHFDRDLPEFGTQGGVHVHKDGLTVTSPVLMWVQALDIIL- 78 (538)
T ss_dssp CCEEEEEEECSSEEEEEEEET---------TCCEEEEEEEEHHHHSGGGCCBTTBEECTTSSCEEEEHHHHHHHHHHHH-
T ss_pred CCEEEEEEEcCcCEEEEEECC---------CCCEEEEEEEecCCcCCcccCCCCeeecCCCccccCcHHHHHHHHHHHH-
Confidence 359999999999999999998 8999998765431 0 00 01344 3445554444
Q ss_pred HHHHHcCCCccCcceEEEeec
Q 017527 83 DALLKSGSNRSAVRAVCLAVS 103 (370)
Q Consensus 83 ~~l~~~~~~~~~v~~IgIgvp 103 (370)
+.+.+.+.++.+|.+|||+--
T Consensus 79 ~~l~~~~~~~~~I~aIgis~q 99 (538)
T 4bc3_A 79 EKMKASGFDFSQVLALSGAGQ 99 (538)
T ss_dssp HHHHHTTCCGGGEEEEEEEEC
T ss_pred HHHHHcCCChHHeEEEEeccc
Confidence 455667777889999988754
No 63
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=96.93 E-value=0.15 Score=50.26 Aligned_cols=76 Identities=12% Similarity=0.114 Sum_probs=54.3
Q ss_pred CcEEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEEEEecCCCc---cccCHHHHHHHHHHHHHHHHHHcCCCccCcce
Q 017527 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNH---NSVGEDAARETIEKVMADALLKSGSNRSAVRA 97 (370)
Q Consensus 21 ~~~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~~~~~~~n~---~~~~~~~~~~~l~~~i~~~l~~~~~~~~~v~~ 97 (370)
..+++|+|||.|++++++.... ++..+++.....++.-. .-.+.+.+.+.|.++++++-..++. ++..
T Consensus 7 ~~~ivglDIGts~I~~vv~~~~------~~~~~i~g~~~~~s~gv~~G~I~di~~~~~~I~~av~~ae~~~g~---~i~~ 77 (419)
T 4a2a_A 7 TVFYTSIDIGSRYIKGLVLGKR------DQEWEALAFSSVKSRGLDEGEIKDAIAFKESVNTLLKELEEQLQK---SLRS 77 (419)
T ss_dssp CCEEEEEEECSSEEEEEEEEC----------CEEEEEEEEECCSEETTEESBHHHHHHHHHHHHHHHHHHHTS---CCCS
T ss_pred CCEEEEEEccCCEEEEEEEEEc------CCCCEEEEEEEeccCCeeCCEEEcHHHHHHHHHHHHHHHHHHcCC---CcCc
Confidence 5689999999999999999751 10127777766553211 1135788888888888888776764 5777
Q ss_pred -EEEeecCC
Q 017527 98 -VCLAVSGV 105 (370)
Q Consensus 98 -IgIgvpG~ 105 (370)
+.+++||-
T Consensus 78 ~v~v~i~g~ 86 (419)
T 4a2a_A 78 DFVISFSSV 86 (419)
T ss_dssp EEEEEECCT
T ss_pred eEEEEEcCC
Confidence 88888887
No 64
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=96.65 E-value=0.49 Score=45.12 Aligned_cols=135 Identities=16% Similarity=0.200 Sum_probs=80.2
Q ss_pred EEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEEEEecCC-CccccCHH----HHHHHHHHHHHHHHHHcCCCccCcce
Q 017527 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCS-NHNSVGED----AARETIEKVMADALLKSGSNRSAVRA 97 (370)
Q Consensus 23 ~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~~~~~~~-n~~~~~~~----~~~~~l~~~i~~~l~~~~~~~~~v~~ 97 (370)
++||||--...+.+++++. ++++........ .....-|+ .-.+.+..+|++++++++++.++|.+
T Consensus 7 ~iLgIdts~~~~svAl~~~----------~~i~~~~~~~~~~~~gGv~p~~a~~~H~~~l~~~i~~~L~~ag~~~~did~ 76 (334)
T 3eno_A 7 IVLGLEGTAHTISCGIIDE----------SRILAMESSMYRPKTGGIRPLDAAVHHSEVIDTVISRALEKAKISIHDIDL 76 (334)
T ss_dssp EEEEEECSSSEEEEEEEES----------SCCCEEEEEECCCSSCSCCHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCCE
T ss_pred eEEEEECCCcCeEEEEEEC----------CEEEEEEEEeeccccCCcCcchHHHHHHHHHHHHHHHHHHHcCCCHHHCCE
Confidence 7999999988899999986 677775433211 11111233 23467888999999999999999999
Q ss_pred EEEee-cCCCCh-hhHHHHHHHHHhhCCCCceEEEeChHHHHHHhhc--CC-CCCeEEEEEcccceeeeeccCCceEe
Q 017527 98 VCLAV-SGVNHP-TDQQRILNWLRDIFPGNVRLYVHNDALAALASGT--MG-KLHGCVLIAGTGTIAYGFTEDGRDAR 170 (370)
Q Consensus 98 IgIgv-pG~~~~-~~~~~l~~~L~~~f~~~~pV~V~NDa~aa~~g~~--~g-~~~~v~l~~GTGi~g~gii~dG~l~~ 170 (370)
|+++. ||.... .-.....+.|...++ .|++-.|--.+-+++.. .+ ....++++.|.++--+ ...+|+...
T Consensus 77 Iav~~gPG~~t~lrvg~~~ak~La~~~~--~Pl~~v~hl~aHa~sa~~~s~~~~pl~L~vsGg~t~l~-~~~~~~~~~ 151 (334)
T 3eno_A 77 IGFSMGPGLAPSLRVTATAARTISVLTG--KPIIGVNHPLGHIEIGRRVTGAIDPVMLYVSGGNTQVI-AHVNGRYRV 151 (334)
T ss_dssp EEEECSSSCHHHHHHHHHHHHHHHHHHT--CCCEEECHHHHHHHHHHHHHTCSSCEEEEESSSCEEEE-EECSSBEEE
T ss_pred EEEEcCCCCcchHHHHHHHHHHHhhccC--CCeEEeccHHHHHHHHHhcCCCCCCEEEEEECCCcEEE-EEeCCEEEE
Confidence 99986 443210 012344556666666 78776664443222221 12 1335555566664222 234455433
No 65
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=96.65 E-value=0.072 Score=49.94 Aligned_cols=106 Identities=17% Similarity=0.137 Sum_probs=60.6
Q ss_pred cEEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEEEEecCCCccccCHHHHHHHHHHHHHHHHHHcCCCccCcceEEEe
Q 017527 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLA 101 (370)
Q Consensus 22 ~~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~~~~~~~n~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~v~~IgIg 101 (370)
.+.+|||+|+|.+++++++. ++++... .+.. ..+++++.+ + ..++..|.+
T Consensus 20 ~~~iGIDiGsTt~K~V~~~~----------~~i~~~~-~~~~-----~~~~~l~~l--------~-----~~~~~~i~~- 69 (287)
T 2ews_A 20 HMKVGIDAGGTLIKIVQEQD----------NQRTFKT-ELTK-----NIDQVVEWL--------N-----QQQIEKLCL- 69 (287)
T ss_dssp -CEEEEEECSSEEEEEEECS----------SCEEEEE-EEGG-----GHHHHHHHH--------H-----TSCCSEEEE-
T ss_pred CeEEEEEEChhhEEEEEEcC----------CEEEEEE-echH-----HHHHHHHHh--------c-----ccCceEEEE-
Confidence 48999999999999999964 7887663 2221 122322221 1 123444443
Q ss_pred ecCCCChhhHHHHHHHHHhhCCCCceEEEeChHHHHHHhhc--CCC-----CCeEEEEEcccceeeeeccC-CceEe
Q 017527 102 VSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGT--MGK-----LHGCVLIAGTGTIAYGFTED-GRDAR 170 (370)
Q Consensus 102 vpG~~~~~~~~~l~~~L~~~f~~~~pV~V~NDa~aa~~g~~--~g~-----~~~v~l~~GTGi~g~gii~d-G~l~~ 170 (370)
.|.-. ..+.+.++ .|....+...|-..|.. ... .+.+++-+|+|. .. +..+ +...|
T Consensus 70 -TG~G~--------~~~~~~l~--~~~~~v~Ei~~~~~Ga~~l~~~~~~~~~~~~vIdIGg~d-si-i~v~~~~f~r 133 (287)
T 2ews_A 70 -TGGNA--------GVIAENIN--IPAQIFVEFDAASQGLGILLKEQGHDLADYIFANVGTGT-SL-HYFDGQSQRR 133 (287)
T ss_dssp -ESTTH--------HHHHTTSS--SCCEECCHHHHHHHHHHHHHHHTTCCCSCEEEEEESSSE-EE-EEECSSCEEE
T ss_pred -EChhH--------HhHhHhhC--CCcceeehhHHHHHHHHHhcccCCCCcCCeEEEEeCCCe-EE-EEEcCCceEE
Confidence 44431 12233555 67777788877655432 121 357899999997 43 3344 44444
No 66
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=96.47 E-value=0.89 Score=46.01 Aligned_cols=102 Identities=16% Similarity=0.162 Sum_probs=67.4
Q ss_pred cEEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEEEEecCCCcc-----ccCHHHHHHHHHHHHHHHHHHcCCCccCcc
Q 017527 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHN-----SVGEDAARETIEKVMADALLKSGSNRSAVR 96 (370)
Q Consensus 22 ~~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~~~~~~~n~~-----~~~~~~~~~~l~~~i~~~l~~~~~~~~~v~ 96 (370)
.++||||.....+.+++++. ++++++.......... ..-...-.+.+..++++++++ ++++++.
T Consensus 6 m~iL~i~ts~~~~~~al~~~---------~~~~~~~~~~~~~~~~gg~~p~~a~~~h~~~l~~~i~~~l~~--~~~~~id 74 (540)
T 3en9_A 6 MICLGLEGTAEKTGVGIVTS---------DGEVLFNKTIMYKPPKQGINPREAADHHAETFPKLIKEAFEV--VDKNEID 74 (540)
T ss_dssp CEEEEEECSSSEEEEEEEET---------TSCEEEEEEEECCCCCSSSSCCCHHHHHHHHHHHHHHHHHHH--SCGGGCC
T ss_pred ceEEEEEcCccceEEEEEEC---------CCeEEEEEEEeecCCCCCCChHHHHHHHHHHHHHHHHHHHHh--CCHhHCc
Confidence 38999999999999999987 5588877654322100 001134466788888999987 7778899
Q ss_pred eEEEee-cCCCCh-hhHHHHHHHHHhhCCCCceEEEeChHHH
Q 017527 97 AVCLAV-SGVNHP-TDQQRILNWLRDIFPGNVRLYVHNDALA 136 (370)
Q Consensus 97 ~IgIgv-pG~~~~-~~~~~l~~~L~~~f~~~~pV~V~NDa~a 136 (370)
+|+++. ||.... .-.....+-|...++ +|++-.|--.+
T Consensus 75 ~ia~~~gPG~~~~l~vg~~~ak~la~~~~--~p~~~v~h~~a 114 (540)
T 3en9_A 75 LIAFSQGPGLGPSLRVTATVARTLSLTLK--KPIIGVNHCIA 114 (540)
T ss_dssp EEEEEEESSCHHHHHHHHHHHHHHHHHHT--CCEEEEEHHHH
T ss_pred EEEEecCCCchhhHHHHHHHHHHHHHHhC--CCeeEeccHHH
Confidence 998876 664221 112345566766676 78886665443
No 67
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=96.44 E-value=0.71 Score=44.48 Aligned_cols=90 Identities=14% Similarity=0.073 Sum_probs=55.9
Q ss_pred CHHHHHHHHHHHHHHHHHHc-CCCccCcceEEEeecCCCChhhHHHHHHHHHhhCCCCceEEEeChHHHHHHhhcC----
Q 017527 69 GEDAARETIEKVMADALLKS-GSNRSAVRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGTM---- 143 (370)
Q Consensus 69 ~~~~~~~~l~~~i~~~l~~~-~~~~~~v~~IgIgvpG~~~~~~~~~l~~~L~~~f~~~~pV~V~NDa~aa~~g~~~---- 143 (370)
.++++...+...+.+..+.. + ..+..+.|++|-.-++.....+++..+.. +. ..+.+.|+..||+++...
T Consensus 134 ~~~ei~a~~L~~l~~~a~~~~~---~~~~~~vitvPa~~~~~~r~~~~~a~~~A-Gl-~~~~li~Ep~AAa~~~~~~~~~ 208 (404)
T 3i33_A 134 FPEEISSMVLTKMKEIAEAYLG---GKVHSAVITVPAYFNDSQRQATKDAGTIT-GL-NVLRIINEPTAAAIAYGLDKKG 208 (404)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHS---SCCCEEEEEECTTCCHHHHHHHHHHHHHH-TC-EEEEEEEHHHHHHHHTTTTSSC
T ss_pred cHHHHHHHHHHHHHHHHHHHhc---cCCCcEEEEECCCCCHHHHHHHHHHHHHc-CC-CeEEEeccHHHHHHHHHhhccc
Confidence 45555555544444443322 2 34677899999887666666777776654 32 468899999998875321
Q ss_pred ---CCCCeEEEEEcccceeeeec
Q 017527 144 ---GKLHGCVLIAGTGTIAYGFT 163 (370)
Q Consensus 144 ---g~~~~v~l~~GTGi~g~gii 163 (370)
.....+++=+|.|+.-..++
T Consensus 209 ~~~~~~~vlV~D~GgGT~dvsv~ 231 (404)
T 3i33_A 209 CAGGEKNVLIFDLGGGTFDVSIL 231 (404)
T ss_dssp SSSSCCEEEEEEECSSCEEEEEE
T ss_pred ccCCCceEEEEECCCCcEEEEEE
Confidence 12344667788887554444
No 68
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=96.24 E-value=0.39 Score=45.85 Aligned_cols=130 Identities=17% Similarity=0.106 Sum_probs=76.0
Q ss_pred cEEEEEEcCccceEEEEEeCCCCCCCCCCCCC--eEEEEEecCCCc-----cccCHHHHHHHHHHHHHHHHHHcCCCccC
Q 017527 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLP--VLARAAAGCSNH-----NSVGEDAARETIEKVMADALLKSGSNRSA 94 (370)
Q Consensus 22 ~~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~--il~~~~~~~~n~-----~~~~~~~~~~~l~~~i~~~l~~~~~~~~~ 94 (370)
..++|||+|.|+++++++.. ++ +......+.+.. .-.+++.+.+.|.+++.+ .+. +
T Consensus 13 ~~~vgiDiGt~~i~~~~~~~----------~~~~i~~~g~~~~ps~~~~~g~i~d~~~~~~~ik~~~~~----~~~---~ 75 (377)
T 2ych_A 13 VEALGLEIGASALKLVEVSG----------NPPALKALASRPTPPGLLMEGMVAEPAALAQEIKELLLE----ART---R 75 (377)
T ss_dssp CCCEEEEECSSEEEEEEEET----------TTTEEEEEEEEECCTTSEETTEESCHHHHHHHHHHHHHH----HTC---C
T ss_pred CceEEEEeCCCeEEEEEEeC----------CceEEEEEEeEECCCCcccCCCcCCHHHHHHHHHHHHHH----cCC---C
Confidence 46899999999999998864 33 433333332211 112466666666665554 443 4
Q ss_pred cceEEEeecCC-----------CChhhH--------------------------------------------------HH
Q 017527 95 VRAVCLAVSGV-----------NHPTDQ--------------------------------------------------QR 113 (370)
Q Consensus 95 v~~IgIgvpG~-----------~~~~~~--------------------------------------------------~~ 113 (370)
+..+.+++||- .++.+- ..
T Consensus 76 ~~~v~~~i~~~~~~~~~~~~~~v~~~el~~~i~~ea~~~~~~~~~~~vid~~~~~~~~~~~~~~~~~v~~va~~~~~v~~ 155 (377)
T 2ych_A 76 KRYVVTALSNLAVILRPIQVPKMPLKEMEEAVRWEAERYIPFPIDEVVLDFAPLTPLSEVQEGEQVQVMVAAARQEAVAG 155 (377)
T ss_dssp CCEEEEEECGGGCEEEEEEEECCCHHHHHHHHHHHHGGGCSSCC-CEEEEEEESSCGGGSCTTSEEEEEEEEEEHHHHHH
T ss_pred cceEEEEecCCcEEEEEEECCCCCHHHHHHHHHHHHhhcCCCChhHceEEEEEeCCCCCCCCcceeEEEEEEecHHHHHH
Confidence 55677888882 111110 22
Q ss_pred HHHHHHhhCCCCceEEEeChHHHHHHhh--c--CCCCC-eEEEEEcccceeeeeccCCceEe
Q 017527 114 ILNWLRDIFPGNVRLYVHNDALAALASG--T--MGKLH-GCVLIAGTGTIAYGFTEDGRDAR 170 (370)
Q Consensus 114 l~~~L~~~f~~~~pV~V~NDa~aa~~g~--~--~g~~~-~v~l~~GTGi~g~gii~dG~l~~ 170 (370)
+.+.++. .+. .++.+.++..|++.+. . ..... .+++-+|.|+.-..++.+|++..
T Consensus 156 ~~~~~~~-aGl-~~~~i~~ep~Aaa~~~~~~~~~~~~~~~~vvDiGggttdi~i~~~g~~~~ 215 (377)
T 2ych_A 156 VLEALRG-AGL-VPVVLDVKPFAGLYPLEARLAEEPDRVFLVLDIGAESTSLVLLRGDKPLA 215 (377)
T ss_dssp HHHHHHH-TTC-EEEEEEEHHHHTTGGGHHHHHTSTTCEEEEEEECSSCEEEEEEETTEEEE
T ss_pred HHHHHHH-CCC-ceEEEecchHHHHHHHHhhcccccCCeEEEEEECCCcEEEEEEECCEEEE
Confidence 3444433 342 4677888888776542 1 11223 46788998887777778888754
No 69
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=95.99 E-value=1.2 Score=42.62 Aligned_cols=90 Identities=16% Similarity=0.018 Sum_probs=54.7
Q ss_pred CHHHHHHHHHHHHHHHHHHc-CCCccCcceEEEeecCCCChhhHHHHHHHHHhhCCCCceEEEeChHHHHHHhhc--CC-
Q 017527 69 GEDAARETIEKVMADALLKS-GSNRSAVRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGT--MG- 144 (370)
Q Consensus 69 ~~~~~~~~l~~~i~~~l~~~-~~~~~~v~~IgIgvpG~~~~~~~~~l~~~L~~~f~~~~pV~V~NDa~aa~~g~~--~g- 144 (370)
.++++...+...+.+..++. + ..+..+.|++|-.-+......+++..+. .+. ..+.+.|+..||+++.. ..
T Consensus 129 ~~~ei~a~~l~~l~~~a~~~~~---~~~~~~vitvP~~~~~~~r~~~~~a~~~-aGl-~~~~li~Ep~Aaa~~~~~~~~~ 203 (394)
T 3qfu_A 129 TPEEISGMILGKMKQIAEDYLG---TKVTHAVVTVPAYFNDAQRQATKDAGTI-AGL-NVLRIVNEPTAAAIAYGLDKSD 203 (394)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHT---SCCCEEEEEECTTCCHHHHHHHHHHHHH-TTC-EEEEEEEHHHHHHHHTTTTSCS
T ss_pred cHHHHHHHHHHHHHHHHHHhcC---CCcceEEEEECCCCCHHHHHHHHHHHHH-cCC-ceEEEecCHHHHHHHHhhccCC
Confidence 45555555444444433322 2 3567788999998776666677777644 452 36789999999887532 11
Q ss_pred -CCCeEEEEEcccceeeeec
Q 017527 145 -KLHGCVLIAGTGTIAYGFT 163 (370)
Q Consensus 145 -~~~~v~l~~GTGi~g~gii 163 (370)
....+++=+|.|+.-..++
T Consensus 204 ~~~~vlV~D~Gggt~dvsv~ 223 (394)
T 3qfu_A 204 KEHQIIVYDLGGGTFDVSLL 223 (394)
T ss_dssp SCEEEEEEEECSSCEEEEEE
T ss_pred CCceEEEEEcCCCceeEEEE
Confidence 1234566788887544443
No 70
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=95.82 E-value=1.5 Score=42.41 Aligned_cols=67 Identities=9% Similarity=-0.061 Sum_probs=45.0
Q ss_pred CcceEEEeecCCCChhhHHHHHHHHHhhCCCCceEEEeChHHHHHHhhcC-----CC-CCeEEEEEcccceeeee
Q 017527 94 AVRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGTM-----GK-LHGCVLIAGTGTIAYGF 162 (370)
Q Consensus 94 ~v~~IgIgvpG~~~~~~~~~l~~~L~~~f~~~~pV~V~NDa~aa~~g~~~-----g~-~~~v~l~~GTGi~g~gi 162 (370)
.+..+.|++|-.-+......+++..+.. +. ..+.+.|+..||+++... .. ...+++=+|.|+.-..+
T Consensus 149 ~~~~~vitvPa~~~~~~r~~~~~a~~~A-Gl-~~~~li~Ep~AAa~~~~~~~~~~~~~~~vlv~D~GgGT~dvsv 221 (409)
T 4gni_A 149 KVTSAVITIPTNFTEKQKAALIAAAAAA-DL-EVLQLISEPAAAVLAYDARPEATISDKIIVVADLGGSRSDVTV 221 (409)
T ss_dssp CCCEEEEEECTTCCHHHHHHHHHHHHHT-TC-EEEEEEEHHHHHHHHTTC------CCEEEEEEEECSSCEEEEE
T ss_pred CCCeEEEEECCCCCHHHHHHHHHHHHHc-CC-CeEEEEcCHHHHHHHHhcccccCCCCCEEEEEECCCCceEEEE
Confidence 5677889999986665666777777665 32 467899999998875321 11 23556668888754444
No 71
>2iir_A Acetate kinase; transferase; 3.30A {Thermotoga maritima}
Probab=95.78 E-value=0.042 Score=53.81 Aligned_cols=65 Identities=18% Similarity=0.112 Sum_probs=53.8
Q ss_pred hHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHHHH
Q 017527 240 LVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCI 313 (370)
Q Consensus 240 ~~~~v~~~A~~GD~~A~~il~~a~~~Lg~~l~~vv~~l~~~~~~~~~P~~VVlgGgv~~~~~~~~l~~~v~~~l 313 (370)
..++|.+++.+||+.|+.+++-++..+.+.|.++...++- .+.||+.||+.+..+.+ .+.+.+.+
T Consensus 283 D~R~l~~~~~~Gd~~A~lA~d~f~yri~k~IGa~~a~Lgg-------vDaIVFTgGIGEns~~v--R~~i~~~l 347 (403)
T 2iir_A 283 DMRDIEEAALKGDEWCKLVLEIYDYRIAKYIGAYAAAMNG-------VDAIVFTAGVGENSPIT--REDVCSYL 347 (403)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHTC-------CSEEEEEHHHHTTCHHH--HHHHHHTT
T ss_pred CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHhCC-------CCEEEECcccccCCHHH--HHHHHhhh
Confidence 4588888889999999999999999999999999999872 68999999999765443 55555444
No 72
>1g99_A Acetate kinase; alpha/beta, askha (acetate and sugar kinases, HSC70, actin) superfamily, conserved epsilon conformation; HET: ADP; 2.50A {Methanosarcina thermophila} SCOP: c.55.1.2 c.55.1.2 PDB: 1tuu_A* 1tuy_A*
Probab=95.58 E-value=0.035 Score=54.46 Aligned_cols=138 Identities=12% Similarity=0.108 Sum_probs=83.6
Q ss_pred CCeEEEEEcccceeeeeccCCceEe-eCCC----CCCcCCCCchHHHHHHHHHHHHHHHcCCCCCchhHHHHHHHcCCCC
Q 017527 146 LHGCVLIAGTGTIAYGFTEDGRDAR-AAGA----GPILGDWGSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSS 220 (370)
Q Consensus 146 ~~~v~l~~GTGi~g~gii~dG~l~~-aGg~----G~llgd~Gs~~~iG~~~~~~~~~~~dg~~~~~~l~~~~~~~~~~~s 220 (370)
.+.|++.+|.|+ ...-+.+|+..- .-|+ |.+.|... |..++..+ -.+.+..+ -+
T Consensus 202 ~~lIv~HLGnGa-Si~Ai~~GksVDTsMG~TpleGl~MgTRs------------------GdiDp~~l-~~l~~~~~-~s 260 (408)
T 1g99_A 202 TKIITCHLGNGS-SITAVEGGKSVETSMGFTPLEGLAMGTRC------------------GSIDPAIV-PFLMEKEG-LT 260 (408)
T ss_dssp CEEEEEEESSSE-EEEEEETTEEEEESCCSSTTSSSCCSSCC------------------CSCCTTHH-HHHHHHHT-CC
T ss_pred CCEEEEEeCCcc-chhheECCEEEEeCCCCCCCCCCCCCCCC------------------CCCCHHHH-HHHHHhcC-CC
Confidence 478899999998 444558999753 1221 22222211 11111111 22222222 24
Q ss_pred hhhHHHHhccCCChH---HHhhhHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcc
Q 017527 221 PDELIGWTYVDPSWA---RIAALVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVL 297 (370)
Q Consensus 221 ~~~l~~~~~~~~~~~---~~a~~~~~v~~~A~~GD~~A~~il~~a~~~Lg~~l~~vv~~l~~~~~~~~~P~~VVlgGgv~ 297 (370)
.+++...++++.... .+....++|.+++.+||+.|+.+++-++..+.+.|.++...++- .+.||+.||+.
T Consensus 261 ~~ei~~~Lnk~SGLlglsG~s~D~R~l~~~~~~Gd~~A~lA~d~f~yri~k~IGa~~a~Lgg-------vDaiVFTgGIG 333 (408)
T 1g99_A 261 TREIDTLMNKKSGVLGVSGLSNDFRDLDEAASKGNRKAELALEIFAYKVKKFIGEYSAVLNG-------ADAVVFTAGIG 333 (408)
T ss_dssp HHHHHHHHHHSCHHHHHHSSCSCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHTTS-------CSEEEEEHHHH
T ss_pred HHHHHHHHhhcCCceEecCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHhhCC-------CCEEEECcccc
Confidence 444444443222100 11234588888889999999999999999999999999999972 68999999999
Q ss_pred cCcccccchHHHHHHH
Q 017527 298 EANRRWDIGREVVKCI 313 (370)
Q Consensus 298 ~~~~~~~l~~~v~~~l 313 (370)
+..+.+ .+.+.+.+
T Consensus 334 Ens~~v--R~~i~~~l 347 (408)
T 1g99_A 334 ENSASI--RKRILTGL 347 (408)
T ss_dssp HHCHHH--HHHHHTTC
T ss_pred ccCHHH--HHHHHhhh
Confidence 755443 44444333
No 73
>3khy_A Propionate kinase; csgid, IDP01739, ATP-binding, nucleotide-binding, transferase, structural genomics; 1.98A {Francisella tularensis subsp}
Probab=95.44 E-value=0.098 Score=50.75 Aligned_cols=65 Identities=18% Similarity=0.193 Sum_probs=53.7
Q ss_pred hHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHHHH
Q 017527 240 LVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCI 313 (370)
Q Consensus 240 ~~~~v~~~A~~GD~~A~~il~~a~~~Lg~~l~~vv~~l~~~~~~~~~P~~VVlgGgv~~~~~~~~l~~~v~~~l 313 (370)
..++|.+++++||+.|+.+++-++..+.+.|.++...++ ..+.||+.||+.+..+.+ .+.+.+.+
T Consensus 274 D~R~l~~~~~~gd~~A~lA~d~f~yri~k~IGa~aa~L~-------gvDaIVFTgGIgEns~~i--R~~i~~~l 338 (384)
T 3khy_A 274 DMREVSQLAAKGDSLAKLAIEIFSHRVAKFVASYMIYFN-------KLDALVFTGGIGENAANI--RKNIISKL 338 (384)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHGGGCS-------SCCEEEEEHHHHHHCHHH--HHHHHHHT
T ss_pred cHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHhC-------CCCEEEECCccccCcHHH--HHHHHhhc
Confidence 457888899999999999999999999999999988886 279999999999765443 55555544
No 74
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=95.43 E-value=0.037 Score=46.24 Aligned_cols=89 Identities=15% Similarity=0.216 Sum_probs=56.1
Q ss_pred CCcEEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEEE-EecCCCccccCHHHHHHHHHHHHHHHHHHcCCCccCcceE
Q 017527 20 GREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARA-AAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAV 98 (370)
Q Consensus 20 ~~~~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~~-~~~~~n~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~v~~I 98 (370)
|++.+||+|.|..+|=+++.|. .+.+..-. +....+. +..++.|.+++++ .++..|
T Consensus 1 ~~~~iLglD~G~kriGvAvsd~---------~~~~A~pl~ti~~~~~-----~~~~~~l~~li~e---------~~v~~i 57 (138)
T 1nu0_A 1 MSGTLMAFDFGTKSIGVAVGQR---------ITGTARPLPAIKAQDG-----TPDWNIIERLLKE---------WQPDEI 57 (138)
T ss_dssp CCCEEEEEECCSSEEEEEEEET---------TTTEEEEEEEEEEETT-----EECHHHHHHHHHH---------HCCSEE
T ss_pred CCCeEEEEEeCCCEEEEEEEcC---------CCCEEeeEEEEEcCCc-----chHHHHHHHHHHH---------cCCCEE
Confidence 4567999999999999999998 44432211 2111111 1124445444443 357889
Q ss_pred EEeec----CCCChhhH--HHHHHHHHhhCCCCceEEEeCh
Q 017527 99 CLAVS----GVNHPTDQ--QRILNWLRDIFPGNVRLYVHND 133 (370)
Q Consensus 99 gIgvp----G~~~~~~~--~~l~~~L~~~f~~~~pV~V~ND 133 (370)
-||+| |-..+... ..+.+.|+++|+ +||...+.
T Consensus 58 VvGlP~~mdGt~~~~~~~~~~f~~~L~~~~~--lpV~~~DE 96 (138)
T 1nu0_A 58 IVGLPLNMDGTEQPLTARARKFANRIHGRFG--VEVKLHDE 96 (138)
T ss_dssp EEEEEECTTSCBCHHHHHHHHHHHHHHHHHC--CCEEEEEE
T ss_pred EEecccCCCcCcCHHHHHHHHHHHHHHHHhC--CCEEEEcC
Confidence 99998 44443332 478888888887 89877654
No 75
>2f9w_A Pantothenate kinase; COAA, transferase; HET: PAU; 1.90A {Pseudomonas aeruginosa} SCOP: c.55.1.13 c.55.1.13 PDB: 2f9t_A*
Probab=95.28 E-value=0.46 Score=44.03 Aligned_cols=121 Identities=23% Similarity=0.242 Sum_probs=73.3
Q ss_pred CCcEEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEEEEecCCCccccCHHHHHHHHHHHHHHHHHHcCCCccCcceEE
Q 017527 20 GREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVC 99 (370)
Q Consensus 20 ~~~~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~~~~~~~n~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~v~~Ig 99 (370)
|..+.|.||+|-|++++++++. +++++...+..+ .++....+ . +.+..++..+.
T Consensus 21 ~~~M~L~IDiGNT~ik~g~~~~---------~~~~~~~~r~~t-------~de~~~~l----~------~~~~~~i~~vi 74 (271)
T 2f9w_A 21 MASMILELDCGNSLIKWRVIEG---------AARSVAGGLAES-------DDALVEQL----T------SQQALPVRACR 74 (271)
T ss_dssp --CEEEEEEECSSCEEEEEEET---------TTEEEEEEEESS-------HHHHHHHH----H------HTTTSCEEEEE
T ss_pred ccCcEEEEEeCCCeeEEEEEeC---------CCEEEEEEEecC-------HHHHHHHH----h------cCcccCCCEEE
Confidence 5568999999999999999993 267777766543 12222222 1 12334677665
Q ss_pred EeecCCCChhhHHHHHHHHHhhCCCCceEEE---------eC----------hHHHHHHhhc--CCCCCeEEEEEcccce
Q 017527 100 LAVSGVNHPTDQQRILNWLRDIFPGNVRLYV---------HN----------DALAALASGT--MGKLHGCVLIAGTGTI 158 (370)
Q Consensus 100 IgvpG~~~~~~~~~l~~~L~~~f~~~~pV~V---------~N----------Da~aa~~g~~--~g~~~~v~l~~GTGi~ 158 (370)
++ .+..|.-...|++.+++.|+. .|.+| .| |=.+++++++ ++ .+.+++-+||=+-
T Consensus 75 is--SV~vp~~~~~l~~~~~~~~~~-~p~~v~~~~~~~gl~~~Y~~P~~lGaDR~~~avaA~~~y~-~~~iVVD~GTAtT 150 (271)
T 2f9w_A 75 LV--SVRSEQETSQLVARLEQLFPV-SALVASSGKQLAGVRNGYLDYQRLGLDRWLALVAAHHLAK-KACLVIDLGTAVT 150 (271)
T ss_dssp EE--ECSCHHHHHHHHHHHHHHSSC-CCEECCCCSEETTEECCSSSGGGSCHHHHHHHHHHHHHHS-SCEEEEEESSEEE
T ss_pred EE--ECCchHHHHHHHHHHHHHcCC-CeEEEeCCCccCCceecCCChhhccHHHHHHHHHHHHhcC-CCEEEEEcCCceE
Confidence 54 453566667888889888862 34444 12 2233344432 44 5899999999984
Q ss_pred eeeeccCCceEe
Q 017527 159 AYGFTEDGRDAR 170 (370)
Q Consensus 159 g~gii~dG~l~~ 170 (370)
--.+..+|+...
T Consensus 151 ~D~V~~~G~~lG 162 (271)
T 2f9w_A 151 SDLVAADGVHLG 162 (271)
T ss_dssp EEEECTTSBEEE
T ss_pred EEEECCCCeEEE
Confidence 443434676643
No 76
>4h0o_A Acetate kinase; askha (acetate and S kinase, HSC70, actin) superfamily, ribonuclease H-like fold transferase; 2.40A {Entamoeba histolytica}
Probab=95.23 E-value=0.11 Score=50.67 Aligned_cols=65 Identities=8% Similarity=0.027 Sum_probs=53.2
Q ss_pred hHHHHHHHHhcCC---HHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHHHH
Q 017527 240 LVPVVVSCAEAGD---EVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCI 313 (370)
Q Consensus 240 ~~~~v~~~A~~GD---~~A~~il~~a~~~Lg~~l~~vv~~l~~~~~~~~~P~~VVlgGgv~~~~~~~~l~~~v~~~l 313 (370)
..++|.+++++|| +.|+.+++-++..+.+.|.++...|+= .+.||+.||+.+..+.+ .+.+.+.+
T Consensus 284 D~R~i~~~~~~gd~~~~~A~lA~d~f~yri~k~IGa~aa~L~G-------vDaIVFTgGIGEns~~v--R~~i~~~l 351 (404)
T 4h0o_A 284 DMRDILHEIETRGPKAKTCQLAFDVYIKQLAKTIGGLMVEIGG-------LDLLVFTDQMGLEVWQV--RKAICDKM 351 (404)
T ss_dssp CHHHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHTC-------CSEEEEEHHHHHHCHHH--HHHHHHHT
T ss_pred CHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhcC-------CCEEEECCccccCcHHH--HHHHHhhh
Confidence 4578888899999 999999999999999999999988872 68999999998754443 55555544
No 77
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=94.78 E-value=0.076 Score=44.92 Aligned_cols=93 Identities=15% Similarity=0.153 Sum_probs=57.8
Q ss_pred EEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEE-EEEecCCCccccCHHHHHHHHHHHHHHHHHHcCCCccCcceEEEe
Q 017527 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLA-RAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLA 101 (370)
Q Consensus 23 ~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~-~~~~~~~n~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~v~~IgIg 101 (370)
.+||||.|-.++-+++.|. .|.+.. ..+..+.+. ..+...+.| .+++++ .++..|.||
T Consensus 4 riLGiDpG~~riGvAv~d~---------~g~~a~p~~~I~~~~~---r~~~~~~~l----~~li~~-----~~~~~ivVG 62 (150)
T 1vhx_A 4 RILGLDLGTKTLGVALSDE---------MGWTAQGIETIKINEA---EGDYGLSRL----SELIKD-----YTIDKIVLG 62 (150)
T ss_dssp EEEEEEECSSEEEEEEECT---------TSSSEEEEEEEECBGG---GTBCCHHHH----HHHHTT-----SEEEEEEEE
T ss_pred EEEEEEccCCEEEEEEEEC---------CCCEEeeEEEEEcCCc---chHHHHHHH----HHHHHH-----cCCCEEEEe
Confidence 5999999999999999998 676654 233332210 012223334 344443 468889999
Q ss_pred ecCC----CChhhH--HHHHHHHHhhCCCCceEEEeChHHHHH
Q 017527 102 VSGV----NHPTDQ--QRILNWLRDIFPGNVRLYVHNDALAAL 138 (370)
Q Consensus 102 vpG~----~~~~~~--~~l~~~L~~~f~~~~pV~V~NDa~aa~ 138 (370)
.|=- ..+... ..+...|.+.++ +||+..+......
T Consensus 63 lP~~~nGt~~~~~~~ar~f~~~L~~~~~--lpV~~vDEr~Ts~ 103 (150)
T 1vhx_A 63 FPKNMNGTVGPRGEASQTFAKVLETTYN--VPVVLWDERLTTM 103 (150)
T ss_dssp CCCCBTTBCCHHHHHHHHHHHHHHHHHC--SCEEEECCSSCHH
T ss_pred eeecCCcchhHHHHHHHHHHHHHHHhhC--CCEEEecCCCCHH
Confidence 9822 112221 356777777787 8999877765443
No 78
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=94.57 E-value=3 Score=39.02 Aligned_cols=72 Identities=15% Similarity=0.144 Sum_probs=51.3
Q ss_pred ceEEEeecCCCChhhHHHHHHHHHhhCCCCceEEEeChHHHHHHhhcC---CCCCeEEEEEcccceeeeeccCCceE
Q 017527 96 RAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGTM---GKLHGCVLIAGTGTIAYGFTEDGRDA 169 (370)
Q Consensus 96 ~~IgIgvpG~~~~~~~~~l~~~L~~~f~~~~pV~V~NDa~aa~~g~~~---g~~~~v~l~~GTGi~g~gii~dG~l~ 169 (370)
..+.|++|-.-+...+..+++.++. ++. ..+.+.|+..||+++... .....+++=+|.|+--..++..|.+.
T Consensus 96 ~~~vitvP~~~~~~~r~~~~~a~~~-aG~-~~~~li~ep~Aaa~~~~~~~~~~~~~lVvDiGggttdvsv~~~~~~~ 170 (344)
T 1jce_A 96 PRVVIGVPIGITDVERRAILDAGLE-AGA-SKVFLIEEPMAAAIGSNLNVEEPSGNMVVDIGGGTTEVAVISLGSIV 170 (344)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHHH-TTC-SEEEEEEHHHHHHHHTTCCTTSSSCEEEEEECSSCEEEEEEETTEEE
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHH-cCC-CeEeccCCHHHHHHhcCCCCCCCceEEEEEeCCCeEEEEEEEcCCEE
Confidence 6688999987666666677777654 453 468899999998875322 12467788899888666676777664
No 79
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=94.41 E-value=0.52 Score=45.30 Aligned_cols=92 Identities=17% Similarity=0.250 Sum_probs=65.5
Q ss_pred HHHHHHHHHHHH-HcCCCccCcceEEEeecCCCChhhHHHHHHHHHhhCCCCceEEEeChHHHHHHhhcCCCCCeEEEEE
Q 017527 75 ETIEKVMADALL-KSGSNRSAVRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGTMGKLHGCVLIA 153 (370)
Q Consensus 75 ~~l~~~i~~~l~-~~~~~~~~v~~IgIgvpG~~~~~~~~~l~~~L~~~f~~~~pV~V~NDa~aa~~g~~~g~~~~v~l~~ 153 (370)
+.++.+++.++. ..+.++. -..+-|.+|-......+..+.+.+-+.|+. --+++.|++.+|+++. |...+++|-+
T Consensus 80 d~~e~i~~~~~~~~L~~~~~-~~~vvit~p~~~~~~~r~~~~e~~fe~~g~-~~~~~~~e~~aaa~a~--g~~~~lVvDi 155 (375)
T 2fxu_A 80 DDMEKIWHHTFYNELRVAPE-EHPTLLTEAPLNPKANREKMTQIMFETFNV-PAMYVAIQAVLSLYAS--GRTTGIVLDS 155 (375)
T ss_dssp HHHHHHHHHHHHTTSCCCGG-GSCEEEEECTTCCHHHHHHHHHHHHHTTCC-SEEEEEEHHHHHHHHT--TCSSEEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCCc-CCcEEEEeCCCCcHHHHHHHHHHHHHhcCc-ceEEEccchheeeeec--CCCeEEEEEc
Confidence 445666666663 3444443 245788899887776777788888788872 2488999999998853 5568899999
Q ss_pred cccceeeeeccCCceEe
Q 017527 154 GTGTIAYGFTEDGRDAR 170 (370)
Q Consensus 154 GTGi~g~gii~dG~l~~ 170 (370)
|.|.--...+.+|....
T Consensus 156 G~gtt~v~~v~~G~~~~ 172 (375)
T 2fxu_A 156 GDGVTHNVPIYEGYALP 172 (375)
T ss_dssp CSSCEEEEEEETTEECG
T ss_pred CCCceEEeEeECCEEec
Confidence 99986655677886543
No 80
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=94.05 E-value=0.6 Score=45.42 Aligned_cols=91 Identities=19% Similarity=0.210 Sum_probs=63.8
Q ss_pred HHHHHHHHHHH-HcCCCccCcceEEEeecCCCChhhHHHHHHHHHhhCCCCceEEEeChHHHHHHhhc-------CCCCC
Q 017527 76 TIEKVMADALL-KSGSNRSAVRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGT-------MGKLH 147 (370)
Q Consensus 76 ~l~~~i~~~l~-~~~~~~~~v~~IgIgvpG~~~~~~~~~l~~~L~~~f~~~~pV~V~NDa~aa~~g~~-------~g~~~ 147 (370)
.++.+++.++. ..+.+++ ...+-|++|-...+..+..+.+.+-+.|+. -.+++.|++.+|+++.+ .+. .
T Consensus 88 ~~e~i~~~~~~~~L~~~~~-~~~vvit~p~~~~~~~r~~~~e~~fe~~g~-~~~~l~~ep~aa~~a~~~~~~~~~~~~-~ 164 (418)
T 1k8k_A 88 LMERFMEQVIFKYLRAEPE-DHYFLLTEPPLNTPENREYTAEIMFESFNV-PGLYIAVQAVLALAASWTSRQVGERTL-T 164 (418)
T ss_dssp HHHHHHHHHHHTTTCCCGG-GCCEEEEECTTCCHHHHHHHHHHHHHTSCC-SEEEEEEHHHHHHHHGGGSTTCCSCCC-C
T ss_pred HHHHHHHHHHHhccCCCCC-CCcEEEEeCCCCCHHHHHHHHHHHHHhcCC-CEEEEechHHHHhhhhhcccccCCCCC-e
Confidence 34455555553 2444433 456889999888777777888888777772 34889999999987632 344 7
Q ss_pred eEEEEEcccceeeeeccCCceE
Q 017527 148 GCVLIAGTGTIAYGFTEDGRDA 169 (370)
Q Consensus 148 ~v~l~~GTGi~g~gii~dG~l~ 169 (370)
++++-+|.|.--..++.+|...
T Consensus 165 glVvDiG~gtt~v~~v~~G~~~ 186 (418)
T 1k8k_A 165 GTVIDSGDGVTHVIPVAEGYVI 186 (418)
T ss_dssp EEEEEESSSCEEEEEEETTEEC
T ss_pred EEEEEcCCCceEEEEeECCEEc
Confidence 8999999998666667788754
No 81
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=93.84 E-value=0.13 Score=49.20 Aligned_cols=81 Identities=19% Similarity=0.157 Sum_probs=41.9
Q ss_pred EEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEEEEecCCCccccCHHHHHHHHHHHHHHHHHHcCCCccCcceEEEee
Q 017527 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAV 102 (370)
Q Consensus 23 ~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~~~~~~~n~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~v~~IgIgv 102 (370)
++||+||||-|+|+++.+. +|.+ .....+++-.. +.+. |.++++++.++ +...+|.+
T Consensus 1 ~iiG~DIGGAn~K~a~~~~---------~g~~-~~~~~~~PlW~--~~~~----L~~~l~~~~~~-------~~~~avtM 57 (334)
T 3cet_A 1 MILGIDIGGANTKITELHE---------NGEF-KVHHLYFPMWK--NNDK----LAEVLKTYSND-------VSHVALVT 57 (334)
T ss_dssp CEEEEEEC--CEEEEEECS---------TTCC-EEEEC----------------------------------CCEEEEEE
T ss_pred CeeEEEecccceeeeeecC---------CCce-EEEEEecCCcC--CchH----HHHHHHHHHhh-------hccEEEEe
Confidence 4899999999999999887 6887 55555555332 4333 44444444432 34566888
Q ss_pred cCC-C----ChhhHH-HHHHHHHhhCCCCceE
Q 017527 103 SGV-N----HPTDQQ-RILNWLRDIFPGNVRL 128 (370)
Q Consensus 103 pG~-~----~~~~~~-~l~~~L~~~f~~~~pV 128 (370)
.|= . +..+++ .+.+.+++.|+ .||
T Consensus 58 TgELaD~f~~k~eGV~~I~~~v~~~~~--~~v 87 (334)
T 3cet_A 58 TAELADSYETKKEGVDNILNAAESAFG--SNI 87 (334)
T ss_dssp CCC------CTTHHHHHHHHHHHHHHT--TCE
T ss_pred chhhhhhhcCHHHHHHHHHHHHHHhcC--Cce
Confidence 884 2 233443 67888888897 676
No 82
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=93.70 E-value=0.24 Score=38.76 Aligned_cols=83 Identities=11% Similarity=0.085 Sum_probs=52.9
Q ss_pred EEEEEcCccceEEEEEeCCCCCCCCCCCCCeEE-EEEecCCCccccCHHHHHHHHHHHHHHHHHHcCCCccCcceEEEee
Q 017527 24 ILGLDGGTTSTVCICMPVISMSDSLPDPLPVLA-RAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAV 102 (370)
Q Consensus 24 vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~-~~~~~~~n~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~v~~IgIgv 102 (370)
+||+|.|..+|=+++.|. .+.+-. ..+.. .. ..+..++.|.+.+++ .++..|-||+
T Consensus 3 iLglD~G~kriGvAvsd~---------~~~~A~pl~ti~--~~---~~~~~~~~l~~li~e---------~~v~~iVvGl 59 (98)
T 1iv0_A 3 VGALDVGEARIGLAVGEE---------GVPLASGRGYLV--RK---TLEEDVEALLDFVRR---------EGLGKLVVGL 59 (98)
T ss_dssp EEEEEESSSEEEEEEECS---------CCSSCCCEEEEE--CC---CHHHHHHHHHHHHHH---------HTCCEEEEEC
T ss_pred EEEEEeCCCEEEEEEEeC---------CCCeeeeeEEEE--cc---CcHHHHHHHHHHHHH---------cCCCEEEEee
Confidence 899999999999999997 443311 11111 11 244555666555554 3578899999
Q ss_pred c----CCCChhh--HHHHHHHHHhhCCCCceEEEeC
Q 017527 103 S----GVNHPTD--QQRILNWLRDIFPGNVRLYVHN 132 (370)
Q Consensus 103 p----G~~~~~~--~~~l~~~L~~~f~~~~pV~V~N 132 (370)
| |-..+.. -..+.+.|+++ + +||...+
T Consensus 60 P~~mdGt~~~~~~~~~~f~~~L~~~-~--lpV~~~D 92 (98)
T 1iv0_A 60 PLRTDLKESAQAGKVLPLVEALRAR-G--VEVELWD 92 (98)
T ss_dssp CCCCCSSSCCCSSTTHHHHHHHHHT-T--CEEEEEC
T ss_pred ccCCCCCcCHHHHHHHHHHHHHhcC-C--CCEEEEC
Confidence 8 3333332 24788888887 6 8987654
No 83
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=93.01 E-value=8.5 Score=38.90 Aligned_cols=95 Identities=14% Similarity=0.041 Sum_probs=57.8
Q ss_pred CHHHHHHHHHHHHHHHHHH-cCCCccCcceEEEeecCCCChhhHHHHHHHHHhhCCCCceEEEeChHHHHHHhhcCC---
Q 017527 69 GEDAARETIEKVMADALLK-SGSNRSAVRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGTMG--- 144 (370)
Q Consensus 69 ~~~~~~~~l~~~i~~~l~~-~~~~~~~v~~IgIgvpG~~~~~~~~~l~~~L~~~f~~~~pV~V~NDa~aa~~g~~~g--- 144 (370)
+++++...+..-+.+..+. .+ ..+..+.|++|-.-+......+++..+.. +. ..+.+.|+..||+++-...
T Consensus 115 sp~ei~a~~L~~lk~~ae~~lg---~~v~~~VitVPa~f~~~qr~a~~~A~~~A-Gl-~~~~li~EP~AAAlay~~~~~~ 189 (554)
T 1yuw_A 115 YPEEVSSMVLTKMKEIAEAYLG---KTVTNAVVTVPAYFNDSQRQATKDAGTIA-GL-NVLRIINEPTAAAIAYGLDKKV 189 (554)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHS---SCCCEEEEEECTTCCHHHHHHHHHHHHTT-TC-EEEEEEEHHHHHHHHTTCSTTC
T ss_pred cHHHHHHHHHHHHHHHHHHHhC---CCCCeEEEEECCCCCHHHHHHHHHHHHHc-CC-CeEEEeCcHHHHHHHHHhhccC
Confidence 3566555554444433222 22 35778899999886665566677766544 42 4688999999988753211
Q ss_pred --CCCeEEEEEcccceeeeecc--CCce
Q 017527 145 --KLHGCVLIAGTGTIAYGFTE--DGRD 168 (370)
Q Consensus 145 --~~~~v~l~~GTGi~g~gii~--dG~l 168 (370)
....+++=+|.|+--..++. +|.+
T Consensus 190 ~~~~~vlV~D~GgGT~Dvsv~~~~~g~~ 217 (554)
T 1yuw_A 190 GAERNVLIFDLGGGTFDVSILTIAAGIF 217 (554)
T ss_dssp SSCEEEEEEEECSSCEEEEEEEEETTEE
T ss_pred CCCcEEEEEEcCCCeEEEEEEEEcCCcE
Confidence 13456677888875444444 5654
No 84
>3r6m_A YEAZ, resuscitation promoting factor; actin/HSP70 nucleotide-binding fold, bacterial resuscitation BUT non-culturable state, Y YJEE; 3.10A {Vibrio parahaemolyticus}
Probab=92.89 E-value=2.8 Score=37.21 Aligned_cols=96 Identities=16% Similarity=0.120 Sum_probs=69.0
Q ss_pred EEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEEEEecCCCccccCHHHHHHHHHHHHHHHHHHcCCCccCcceEEEee
Q 017527 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAV 102 (370)
Q Consensus 23 ~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~~~~~~~n~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~v~~IgIgv 102 (370)
.+|+||.-...+.+++++. ++++.+......++ .+.|..+|++++++++++..++.+|+++.
T Consensus 3 ~iLaIdTS~~~~svAl~~~----------~~~~~~~~~~~~~H--------s~~L~p~i~~~L~~a~~~~~dld~Iav~~ 64 (213)
T 3r6m_A 3 KILAIDTATENCSVALLVN----------DQVISRSEVAPRDH--------TKKVLPMVDEVLKEAGLTLQDLDALAFGR 64 (213)
T ss_dssp CEEEEECSSSEEEEEEESS----------SCEEEEEEECCSCC--------HHHHHHHHHHHHHTTTCCTTTCSEEEEEE
T ss_pred EEEEEEccCcceEEEEEEC----------CEEEEEEEechHHH--------HHHHHHHHHHHHHHcCCCHHHccEEEEec
Confidence 5899999999999999976 78887764322222 35567788999999999999999999886
Q ss_pred cCCCChhh---HHHHHHHHHhhCCCCceEEEeChHHHHHH
Q 017527 103 SGVNHPTD---QQRILNWLRDIFPGNVRLYVHNDALAALA 139 (370)
Q Consensus 103 pG~~~~~~---~~~l~~~L~~~f~~~~pV~V~NDa~aa~~ 139 (370)
||.+-.. ..-..+-|...++ +|++=.|--.+.+.
T Consensus 65 -GPGsfTglRig~~~AkgLa~~~~--iPl~gVstL~a~a~ 101 (213)
T 3r6m_A 65 -GPGSFTGVRIGIGIAQGLAFGAE--LPMIGVSTLAAMAQ 101 (213)
T ss_dssp -ESSCHHHHHHHHHHHHHHHHHTT--CCEEEEEHHHHHHH
T ss_pred -CCCchhhHHHHHHHHHHHHHHhC--CCEEEEcCHHHHHH
Confidence 5543322 2345667777776 89887776554433
No 85
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=92.73 E-value=0.81 Score=43.22 Aligned_cols=131 Identities=12% Similarity=0.104 Sum_probs=82.7
Q ss_pred EEEEEEcCccceEEEEEeCCCCCCCCCCCC--CeEEEEEecCCCcc------ccCHHHHHHHHHHHHHHHH---HHcCCC
Q 017527 23 VILGLDGGTTSTVCICMPVISMSDSLPDPL--PVLARAAAGCSNHN------SVGEDAARETIEKVMADAL---LKSGSN 91 (370)
Q Consensus 23 ~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g--~il~~~~~~~~n~~------~~~~~~~~~~l~~~i~~~l---~~~~~~ 91 (370)
.+.+||+|.+++|+.+++.. ++ +++.+.+.+..--. ..+ ++.++...++++++. +..++
T Consensus 13 ~~a~IDiGSns~rl~I~~~~--------~~~~~~i~~~k~~vrLg~g~~~~g~ls-~eai~r~~~~L~~f~~~~~~~~v- 82 (315)
T 1t6c_A 13 RVASIDIGSYSVRLTIAQIK--------DGKLSIILERGRITSLGTKVKETGRLQ-EDRIEETIQVLKEYKKLIDEFKV- 82 (315)
T ss_dssp EEEEEEECSSEEEEEEEEEE--------TTEEEEEEEEEEECCTTTTHHHHSSCC-HHHHHHHHHHHHHHHHHHHHTTC-
T ss_pred EEEEEEECcCcEEEEEEEEc--------CCcEEEEeeeeEEeecCCCccccCCcC-HHHHHHHHHHHHHHHHHHHHCCC-
Confidence 67889999999999999871 23 33444433321000 011 344555556655554 33333
Q ss_pred ccCcceEEEeecCCCChhhHHHHHHHHHhhCCCCceEEEeChHHHHHH---hh--cCC-CCCeEEEEEcccceeeeeccC
Q 017527 92 RSAVRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALA---SG--TMG-KLHGCVLIAGTGTIAYGFTED 165 (370)
Q Consensus 92 ~~~v~~IgIgvpG~~~~~~~~~l~~~L~~~f~~~~pV~V~NDa~aa~~---g~--~~g-~~~~v~l~~GTGi~g~gii~d 165 (370)
+++ .+++.+.+=+..+...+.+.+++.++ .++.|.+...=|.+ |. ..+ ..+++++=+|.|+--..+..+
T Consensus 83 -~~i--~~vATsA~R~A~N~~~fl~~v~~~~G--~~i~vIsg~eEA~l~~~gv~~~l~~~~~~lvvDIGGGStEl~~~~~ 157 (315)
T 1t6c_A 83 -ERV--KAVATEAIRRAKNAEEFLERVKREVG--LVVEVITPEQEGRYAYLAVAYSLKPEGEVCVVDQGGGSTEYVFGKG 157 (315)
T ss_dssp -SEE--EEEECHHHHTSTTHHHHHHHHHHHTC--CCEEECCHHHHHHHHHHHHHHHTCCCSEEEEEEEETTEEEEEEEET
T ss_pred -CeE--EEEEcHHHHcCcCHHHHHHHHHHHHC--CCEEEcCHHHHHHHHHHHHHhhcccCCCEEEEEeCCCcEEEEEEeC
Confidence 223 35677777555677889999999998 78888888764432 22 233 456888999999877666566
Q ss_pred Cce
Q 017527 166 GRD 168 (370)
Q Consensus 166 G~l 168 (370)
+++
T Consensus 158 ~~~ 160 (315)
T 1t6c_A 158 YKV 160 (315)
T ss_dssp TEE
T ss_pred Cce
Confidence 765
No 86
>2a6a_A Hypothetical protein TM0874; glycoprotein endopeptidase, structural genomics, JOI for structural genomics, JCSG; 2.50A {Thermotoga maritima} SCOP: c.55.1.9 c.55.1.9
Probab=92.25 E-value=1.6 Score=38.92 Aligned_cols=97 Identities=8% Similarity=-0.061 Sum_probs=70.3
Q ss_pred cEEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEEEEecCCCccccCHHHHHHHHHHHHHHHHHHcCCCccCcceEEEe
Q 017527 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLA 101 (370)
Q Consensus 22 ~~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~~~~~~~n~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~v~~IgIg 101 (370)
.++|+||--...+.+++++. ++++ .......... .+.|..+|+++++++++...++.+|+++
T Consensus 12 ~~iLaidTS~~~~sval~~~----------~~~l-~~~~~~~r~H-------se~L~p~i~~~L~~a~~~~~dld~Iav~ 73 (218)
T 2a6a_A 12 HMNVLALDTSQRIRIGLRKG----------EDLF-EISYTGEKKH-------AEILPVVVKKLLDELDLKVKDLDVVGVG 73 (218)
T ss_dssp -CEEEEEECSSSEEEEEEET----------TEEE-EEEEESCGGG-------GGHHHHHHHHHHHHHTCCGGGCSEEEEE
T ss_pred ceEEEEEcCCcCeEEEEEEC----------CEEE-EEEecchHHH-------HHHHHHHHHHHHHHcCCCHHHCCEEEEE
Confidence 57999999999999999986 6777 4433322221 4667788889999999999999999998
Q ss_pred ecCCCChhh---HHHHHHHHHhhCCCCceEEEeChHHHHHH
Q 017527 102 VSGVNHPTD---QQRILNWLRDIFPGNVRLYVHNDALAALA 139 (370)
Q Consensus 102 vpG~~~~~~---~~~l~~~L~~~f~~~~pV~V~NDa~aa~~ 139 (370)
. ||.+-.. ..-..+-|...++ +|++=.|--.+.+.
T Consensus 74 ~-GPGsfTGlRiG~~~Ak~La~~~~--iPl~gVs~l~a~a~ 111 (218)
T 2a6a_A 74 I-GPGGLTGLRVGIATVVGLVSPYD--IPVAPLNSFEMTAK 111 (218)
T ss_dssp C-CSSCHHHHHHHHHHHHHHHGGGT--CCEEEECHHHHHHH
T ss_pred c-CCCchHhHHHHHHHHHHHHHHcC--CCEEEeCcHHHHHh
Confidence 5 5544322 2345677777777 89998887665544
No 87
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=91.80 E-value=13 Score=38.08 Aligned_cols=90 Identities=14% Similarity=0.042 Sum_probs=55.0
Q ss_pred CHHHHHHHHHHHHHHHHHHc-CCCccCcceEEEeecCCCChhhHHHHHHHHHhhCCCCceEEEeChHHHHHHhhcCC---
Q 017527 69 GEDAARETIEKVMADALLKS-GSNRSAVRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGTMG--- 144 (370)
Q Consensus 69 ~~~~~~~~l~~~i~~~l~~~-~~~~~~v~~IgIgvpG~~~~~~~~~l~~~L~~~f~~~~pV~V~NDa~aa~~g~~~g--- 144 (370)
+++++...+...+.+..+.. + ..+..+.|++|-.-+......+++..+.. +. ..+.+.|+..||+++-...
T Consensus 111 ~p~ei~a~iL~~lk~~ae~~lg---~~v~~~VITVPa~f~~~qr~a~~~Aa~~A-Gl-~v~~li~EP~AAAlaygl~~~~ 185 (605)
T 4b9q_A 111 APPQISAEVLKKMKKTAEDYLG---EPVTEAVITVPAYFNDAQRQATKDAGRIA-GL-EVKRIINEPTAAALAYGLDKGT 185 (605)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHT---SCCCEEEEEECTTCCHHHHHHHHHHHHHT-TC-EEEEEEEHHHHHHHHHHTTSCC
T ss_pred CHHHHHHHHHHHHHHHHHHHhC---CCCCeEEEEECCCCCHHHHHHHHHHHHHc-CC-ceEEEeCcHHHHHHHhhhhccC
Confidence 45565555444444433322 3 35778899999886655556677766654 32 3678999999988753211
Q ss_pred -CCCeEEEEEcccceeeeec
Q 017527 145 -KLHGCVLIAGTGTIAYGFT 163 (370)
Q Consensus 145 -~~~~v~l~~GTGi~g~gii 163 (370)
....+++=+|.|+.=..++
T Consensus 186 ~~~~vlV~DlGGGT~Dvsi~ 205 (605)
T 4b9q_A 186 GNRTIAVYDLGGGAFDISII 205 (605)
T ss_dssp SSEEEEEEEECSSCEEEEEE
T ss_pred CCCEEEEEECCCCeEEEEEE
Confidence 1345567788886544443
No 88
>3bzc_A TEX; helix-turn-helix, helix-hairpin-helix, S1 domain, YQGF domain, transcription, RNA binding protein; 2.27A {Pseudomonas aeruginosa} SCOP: a.60.2.6 a.60.2.6 a.294.1.1 b.40.4.5 c.55.3.13 PDB: 3bzk_A 2oce_A
Probab=91.35 E-value=2.2 Score=45.29 Aligned_cols=98 Identities=15% Similarity=0.162 Sum_probs=61.3
Q ss_pred CcEEEEEEcC-ccceEEEEEeCCCCCCCCCCCCCeEEEEEecCCCccccCHHHHHHHHHHHHHHHHHHcCCCccCcceEE
Q 017527 21 REVILGLDGG-TTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVC 99 (370)
Q Consensus 21 ~~~vlGVDiG-gT~i~~~l~d~~~~~~~~~~~g~il~~~~~~~~n~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~v~~Ig 99 (370)
...+||+|-| .|.++++++|. +|+++...+.-+..+. ...+...+.|.+++ .++ ++..|+
T Consensus 328 ~~~vlg~dpg~r~g~k~a~vd~---------~G~~l~~~~iy~~~~~-~~~~~~~~~l~~li----~~~-----~~~~Ia 388 (785)
T 3bzc_A 328 PRATLGLDPGLRTGVKVAVVDA---------TGKLLDTATVYPHAPK-NQWDQTLAVLAALC----AKH-----QVELIA 388 (785)
T ss_dssp SCCEEEEECCSSSCEEEEEECT---------TSCEEEEEEECCSGGG-CCHHHHHHHHHHHH----HHH-----TCCEEE
T ss_pred CCeEEEECCCCcCceEEEEECC---------CCCEEEEEEEecCCch-hHHHHHHHHHHHHH----HHc-----CCCEEE
Confidence 4589999999 69999999999 8999988776443332 22344555555544 443 345566
Q ss_pred EeecCCCChhhHHHHHHHHHhhCC-CCceEEEeChHHHHHH
Q 017527 100 LAVSGVNHPTDQQRILNWLRDIFP-GNVRLYVHNDALAALA 139 (370)
Q Consensus 100 IgvpG~~~~~~~~~l~~~L~~~f~-~~~pV~V~NDa~aa~~ 139 (370)
||- |-.+.+...-+.+.+++ ++ ..+|+.+.|++.+-+.
T Consensus 389 IGn-gtasret~~~v~~l~~~-~~~~~i~~v~v~e~gArvy 427 (785)
T 3bzc_A 389 IGN-GTASRETDKLAGELIKK-YPGMKLTKIMVSEAGASVY 427 (785)
T ss_dssp EES-STTHHHHHHHHHHHHHH-CGGGCCEEEEECCHHHHHH
T ss_pred ECC-CccCHHHHHHHHHHHHh-cccCCCCEEEEcCCcCCHH
Confidence 654 43333333334444443 32 1279999999887544
No 89
>2gel_A Putative GRAM negative resuscitation promoting FA; YEAZ, RPF, actin-like-fold, glycoprotease, chaperone; 2.05A {Salmonella typhimurium} PDB: 2gem_A 1okj_A
Probab=91.20 E-value=5.2 Score=35.79 Aligned_cols=96 Identities=16% Similarity=0.066 Sum_probs=66.8
Q ss_pred EEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEEEEecCCCccccCHHHHHHHHHHHHHHHHHHcCCCccCcceEEEee
Q 017527 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAV 102 (370)
Q Consensus 23 ~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~~~~~~~n~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~v~~IgIgv 102 (370)
.+|+||.-...+.+++++. ++++.+.......+ .+.|..+|++++++++++..++.+|+++.
T Consensus 2 ~iL~idTs~~~~sval~~~----------~~~~~~~~~~~~~h--------~~~l~~~i~~~L~~a~~~~~did~Iav~~ 63 (231)
T 2gel_A 2 RILAIDTATEACSVALWNN----------GTINAHFELCPREH--------TQRILPMVQEILAASGASLNEIDALAFGR 63 (231)
T ss_dssp EEEEEECSSSEEEEEEEET----------TEEEEEEEECCSCC--------HHHHHHHHHHHHHHTTCCGGGCSEEEEEC
T ss_pred eEEEEECCCcCeEEEEEEC----------CEEEEEEhhhhHHH--------HHHHHHHHHHHHHHcCCCHHHCCEEEEEc
Confidence 6899999988899999986 67776443322222 24577888999999999999999999975
Q ss_pred cCCCChhh---HHHHHHHHHhhCCCCceEEEeChHHHHHH
Q 017527 103 SGVNHPTD---QQRILNWLRDIFPGNVRLYVHNDALAALA 139 (370)
Q Consensus 103 pG~~~~~~---~~~l~~~L~~~f~~~~pV~V~NDa~aa~~ 139 (370)
|+..-.. .....+-|...++ +|++-.|--.+-+.
T Consensus 64 -GPGsftglRig~~~ak~la~~~~--~Pl~~V~~l~a~a~ 100 (231)
T 2gel_A 64 -GPGSFTGVRIGIGIAQGLALGAN--LPMIGVSTLATMAQ 100 (231)
T ss_dssp -CSSCHHHHHHHHHHHHHHHHTTT--CCEEEECHHHHHHH
T ss_pred -CCChhHhHHHHHHHHHHHHHHcC--CCEEEeccHHHHHH
Confidence 5543222 2244566666666 89887776555433
No 90
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=91.19 E-value=0.57 Score=48.50 Aligned_cols=71 Identities=24% Similarity=0.292 Sum_probs=51.6
Q ss_pred CcEEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEEEEecCCCcc-c----------------cCHH----HHHHHHHH
Q 017527 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHN-S----------------VGED----AARETIEK 79 (370)
Q Consensus 21 ~~~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~~~~~~~n~~-~----------------~~~~----~~~~~l~~ 79 (370)
..|=|+||||.|.+.+.++|+. +|+++...... |++ . .+.+ .+++.|.+
T Consensus 205 ~~~GlAvDiGTTtv~~~LvdL~--------tG~~l~~~~~~--NpQ~~~G~DVisRI~~a~~~~~g~~~L~~~v~~~in~ 274 (631)
T 3zyy_X 205 RVFGLAIDIGTTTVVVQLVDLV--------SGKVLGTKGNY--NKQAAFGDDVISRIIYVDENPDGAEKLRKAVLSTINE 274 (631)
T ss_dssp CCEEEEEEECSSEEEEEEEETT--------TCCEEEEEEEE--CGGGGTCSSHHHHHHHHHHCTTHHHHHHHHHHHHHHH
T ss_pred CceEEEEEecccceeEEEEECC--------CCCEEEeeccc--CCCCCcchHHHHHHHHHhcCcccHHHHHHHHHHHHHH
Confidence 4588999999999999999983 79999876543 222 0 1111 24556667
Q ss_pred HHHHHHHHcCCCccCcceEEEe
Q 017527 80 VMADALLKSGSNRSAVRAVCLA 101 (370)
Q Consensus 80 ~i~~~l~~~~~~~~~v~~IgIg 101 (370)
++.++++++++++++|..+.|.
T Consensus 275 li~~l~~~~~i~~~~I~~~~v~ 296 (631)
T 3zyy_X 275 LIFQLCKEHGVEKKEIMAAVVA 296 (631)
T ss_dssp HHHHHHHHHTCCGGGEEEEEEE
T ss_pred HHHHHHHHcCCCHHHeeEEEEE
Confidence 7777778889999988877664
No 91
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=91.09 E-value=10 Score=35.78 Aligned_cols=91 Identities=16% Similarity=0.046 Sum_probs=53.6
Q ss_pred CHHHHHHHHHHHHHHHHH-HcCCCccCcceEEEeecCCCChhhHHHHHHHHHhhCCCCceEEEeChHHHHHHhhcCC---
Q 017527 69 GEDAARETIEKVMADALL-KSGSNRSAVRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGTMG--- 144 (370)
Q Consensus 69 ~~~~~~~~l~~~i~~~l~-~~~~~~~~v~~IgIgvpG~~~~~~~~~l~~~L~~~f~~~~pV~V~NDa~aa~~g~~~g--- 144 (370)
+++++...+...+.+..+ ..+ ..+..+.|++|-.-+......+++.++. .+. ..+.+.|+..||+++-...
T Consensus 111 ~~~~i~~~~L~~l~~~a~~~~~---~~~~~~vitvP~~~~~~~r~~~~~a~~~-aGl-~~~~li~Ep~Aaa~~~~~~~~~ 185 (383)
T 1dkg_D 111 APPQISAEVLKKMKKTAEDYLG---EPVTEAVITVPAYFNDAQRQATKDAGRI-AGL-EVKRIINEPTAAALAYGLDKGT 185 (383)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHS---SCCCEEEECBCTTCCHHHHHHHHHHHHH-TTC-EESCCCBHHHHHHHHHTCCC-C
T ss_pred cHHHHHHHHHHHHHHHHHHHhC---CCCCeEEEEECCCCCHHHHHHHHHHHHH-cCC-ceEEEeccHHHHHHHHHhccCC
Confidence 455555444433333222 222 2456788999997665556677776654 442 3567899999988753221
Q ss_pred -CCCeEEEEEcccceeeeecc
Q 017527 145 -KLHGCVLIAGTGTIAYGFTE 164 (370)
Q Consensus 145 -~~~~v~l~~GTGi~g~gii~ 164 (370)
....+++=+|.|+-=..++.
T Consensus 186 ~~~~~lVvD~Gggttdvsv~~ 206 (383)
T 1dkg_D 186 GNRTIAVYDLGGGTFDISIIE 206 (383)
T ss_dssp CEEEEEEEEECSSCEEEEEEE
T ss_pred CCcEEEEEEcCCCeEEEEEEE
Confidence 12456777888875444444
No 92
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=91.01 E-value=2 Score=40.46 Aligned_cols=137 Identities=12% Similarity=0.115 Sum_probs=83.0
Q ss_pred CCcEEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEEEEecCC------CccccCHHHHHHHHHHHHHHHH---HHcCC
Q 017527 20 GREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCS------NHNSVGEDAARETIEKVMADAL---LKSGS 90 (370)
Q Consensus 20 ~~~~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~~~~~~~------n~~~~~~~~~~~~l~~~i~~~l---~~~~~ 90 (370)
|+..+..||+|..++|+.+.+.. +..-+++.+.+.+.. ..... .++.++...++++++. +..++
T Consensus 2 m~~~~A~IDiGSNsirL~I~~~~------~~~~~~i~~~k~~vrLg~g~~~~g~l-s~eai~r~~~~L~~f~~~~~~~~v 74 (315)
T 3mdq_A 2 MSQRIGVIDMGTNTFHLLITDIV------NDRPHTLVNEKSAVGLGKGGITKGFI-TEEAMDRALDTLKKFRVILDEHAV 74 (315)
T ss_dssp --CEEEEEEECSSEEEEEEEEEE------TTEEEEEEEEEEECCSSTTTGGGTCC-CHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCceEEEEEecCCcEEEEEEEEc------CCceEEeeeceeeeeccccccccCCc-CHHHHHHHHHHHHHHHHHHHHcCC
Confidence 55678999999999999999861 111234444433321 00012 2344566666665554 44444
Q ss_pred CccCcceEEEeecCCCChhhHHHHHHHHHhhCCCCceEEEeChHHHH---HHhh--cCC--CCCeEEEEEcccceeeeec
Q 017527 91 NRSAVRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAA---LASG--TMG--KLHGCVLIAGTGTIAYGFT 163 (370)
Q Consensus 91 ~~~~v~~IgIgvpG~~~~~~~~~l~~~L~~~f~~~~pV~V~NDa~aa---~~g~--~~g--~~~~v~l~~GTGi~g~gii 163 (370)
+++. +++.+.+=+..+...+.+.+++.++ .++.|.+...=| .+|. ... ..+.+++=+|.|+--..+.
T Consensus 75 --~~v~--~vATsA~R~A~N~~~fl~~i~~~tG--~~i~vIsG~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~ 148 (315)
T 3mdq_A 75 --VHVI--ATGTSAVRSGSNKQVLIDRIKKEVN--IDVEVIDGAREAELIFRGVQQAVPMEDHISLAMDIGGGSVEFIIG 148 (315)
T ss_dssp --CEEE--EEECHHHHHCTTHHHHHHHHHHHHC--CCEEECCHHHHHHHHHHHHHHHSCCTTCCEEEEEECSSCEEEEEE
T ss_pred --CEEE--EEeeHHHHcCcCHHHHHHHHHHHHC--CCeEEeCHHHHHHHHHHHHHhcCCCCCCCEEEEEeCCCceEEEEE
Confidence 2333 5666666444566789999999998 788887776533 2222 122 2568899999999776666
Q ss_pred cCCceE
Q 017527 164 EDGRDA 169 (370)
Q Consensus 164 ~dG~l~ 169 (370)
.++++.
T Consensus 149 ~~~~~~ 154 (315)
T 3mdq_A 149 NKNEIL 154 (315)
T ss_dssp CSSCEE
T ss_pred ECCeEe
Confidence 666653
No 93
>3sk3_A Acetate kinase, acetokinase; actin-like ATPase domain, askha superfamily of phosphotransf acetokinase, ATP binding, phosphotransferase; HET: CIT; 1.90A {Salmonella enterica subsp} PDB: 3slc_A
Probab=90.39 E-value=0.18 Score=49.61 Aligned_cols=138 Identities=17% Similarity=0.167 Sum_probs=77.0
Q ss_pred CCeEEEEEcccceeeeeccCCceEee-CCC----CCCcCCCCchHHHHHHHHHHHHHHHcCCCCCchhHHHHHHHcCCCC
Q 017527 146 LHGCVLIAGTGTIAYGFTEDGRDARA-AGA----GPILGDWGSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSS 220 (370)
Q Consensus 146 ~~~v~l~~GTGi~g~gii~dG~l~~a-Gg~----G~llgd~Gs~~~iG~~~~~~~~~~~dg~~~~~~l~~~~~~~~~~~s 220 (370)
.+.|++.+|.|+-- .-+.+|+..-. =++ |.+.+.. .|..++. +.-.+.+..+. +
T Consensus 219 ~~lIv~HLGnGaSi-~Ai~~GksvDTsMG~TpleGl~mgtR------------------sGdiDp~-~l~~l~~~~g~-s 277 (415)
T 3sk3_A 219 LNIITCHLGNGGSV-SAIRNGKCVDTSMGLTPLEGLVMGTR------------------SGDIDPA-IIFHLHDTLGM-S 277 (415)
T ss_dssp CCEEEEECSSSCEE-EEEETTEEEEECCCCCCSCC-------------------------CCCCHH-HHHHHHHHHTC-C
T ss_pred CcEEEEEeCCCceE-EEEECCEEEEeCCCcCCCCCccCCCC------------------CCCCChH-HHHHHHHhcCC-C
Confidence 37899999999844 45589998541 111 2221111 1111111 12222333332 4
Q ss_pred hhhHHHHhccCCC---hHHHhhhHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcc
Q 017527 221 PDELIGWTYVDPS---WARIAALVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVL 297 (370)
Q Consensus 221 ~~~l~~~~~~~~~---~~~~a~~~~~v~~~A~~GD~~A~~il~~a~~~Lg~~l~~vv~~l~~~~~~~~~P~~VVlgGgv~ 297 (370)
.+++...++++.. -..+....++|. .+.+||+.|+.+++-++..+.+.|.++...++ | .-+.||+.||+.
T Consensus 278 ~~ei~~~Lnk~SGLlglsG~S~D~R~le-~~~~gd~~A~lA~d~f~yri~k~IGa~aa~L~--G----~vDaIVFTgGIG 350 (415)
T 3sk3_A 278 VDQINKMLTKESGLLGLTEVTSDCRYVE-DNYATKEDAKRAMDVYCHRLAKYIGSYTALMD--G----RLDAVVFTGGIG 350 (415)
T ss_dssp HHHHHHHC------CCSTTTTCGGGCSS-CCCCCHHHHHHHHHHHHHHHHHHHHHGGGGST--T----CCCEEEEEHHHH
T ss_pred HHHHHHHHhcCcCcccccCCcchHHHHH-HHHcCCHhHHHHHHHHHHHHHHHHHHHHHHhC--C----CCCEEEECCccc
Confidence 4555544442210 001111234443 34479999999999999999999999999985 0 138999999999
Q ss_pred cCcccccchHHHHHHH
Q 017527 298 EANRRWDIGREVVKCI 313 (370)
Q Consensus 298 ~~~~~~~l~~~v~~~l 313 (370)
+..+.+ ++.+.+.+
T Consensus 351 Ens~~v--R~~v~~~l 364 (415)
T 3sk3_A 351 ENAAMV--RELSLGKL 364 (415)
T ss_dssp TTCHHH--HHHHHHTC
T ss_pred cCCHHH--HHHHHhhc
Confidence 875443 44444444
No 94
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=87.74 E-value=7.7 Score=38.71 Aligned_cols=90 Identities=14% Similarity=0.006 Sum_probs=54.6
Q ss_pred CHHHHHHHHHHHHHHHHHH-cCCCccCcceEEEeecCCCChhhHHHHHHHHHhhCCCCceEEEeChHHHHHHhhcC---C
Q 017527 69 GEDAARETIEKVMADALLK-SGSNRSAVRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGTM---G 144 (370)
Q Consensus 69 ~~~~~~~~l~~~i~~~l~~-~~~~~~~v~~IgIgvpG~~~~~~~~~l~~~L~~~f~~~~pV~V~NDa~aa~~g~~~---g 144 (370)
+++++...+...+.+..++ .+ ..+..+.|++|-.-+......+++..+. .+. ..+.+.|+..||+++-.. .
T Consensus 85 ~~~ei~a~~L~~l~~~ae~~l~---~~~~~~VitvPa~~~~~qr~a~~~a~~~-AGl-~~~~li~Ep~AAAlay~~~~~~ 159 (509)
T 2v7y_A 85 TPQEISAIILQYLKSYAEDYLG---EPVTRAVITVPAYFNDAQRQATKDAGRI-AGL-EVERIINEPTAAALAYGLDKEE 159 (509)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHT---SCCCEEEEEECTTCCHHHHHHHHHHHHH-TTC-EEEEEEEHHHHHHHHTTGGGSC
T ss_pred cHHHHHHHHHHHHHHHHHHHhC---CCCCeEEEEECCCCCHHHHHHHHHHHHH-cCC-CeEEEecCHHHHHHHHhhccCC
Confidence 4666655554444333222 22 3467788999998665556667776644 452 357899999998875321 1
Q ss_pred CCCeEEEEEcccceeeeec
Q 017527 145 KLHGCVLIAGTGTIAYGFT 163 (370)
Q Consensus 145 ~~~~v~l~~GTGi~g~gii 163 (370)
....+++=+|.|+-=..++
T Consensus 160 ~~~vlV~D~GgGT~Dvsv~ 178 (509)
T 2v7y_A 160 DQTILVYDLGGGTFDVSIL 178 (509)
T ss_dssp SEEEEEEEECSSCEEEEEE
T ss_pred CCEEEEEECCCCeEEEEEE
Confidence 2345677788887544443
No 95
>3psf_A Transcription elongation factor SPT6; nucleus; 2.59A {Saccharomyces cerevisiae}
Probab=86.55 E-value=2.7 Score=45.94 Aligned_cols=101 Identities=10% Similarity=0.091 Sum_probs=58.4
Q ss_pred cEEEEEEcCc-c----ceEEEEEeCCCCCCCCCCCCCeEEEEEecCCCccccCHHHHHHHHHHHHHHHHHHcCCCccCcc
Q 017527 22 EVILGLDGGT-T----STVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVR 96 (370)
Q Consensus 22 ~~vlGVDiGg-T----~i~~~l~d~~~~~~~~~~~g~il~~~~~~~~n~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~v~ 96 (370)
..++|+|-|- | .++++++|. +|+++...+..+..+.....+...+.| .+++.++ ++.
T Consensus 519 ~~VlaldpG~~~~~~~g~k~a~vd~---------~G~~l~~~~i~~~~~~~~~~~~~~~~l----~~li~~~-----~~~ 580 (1030)
T 3psf_A 519 PKILSLTCGQGRFGADAIIAVYVNR---------KGDFIRDYKIVDNPFDKTNPEKFEDTL----DNIIQSC-----QPN 580 (1030)
T ss_dssp CCEEEEECTTCCTTTSCEEEEEECT---------TSCEEEEEEECSCTTCSSCCHHHHHHH----HHHHHHH-----CCS
T ss_pred CeEEEecCCCCCCCCCCeEEEEECC---------CCCEEEEEEEcCCCCChhhHHHHHHHH----HHHHHHc-----CCc
Confidence 4799999983 2 799999999 899999887632111111233334444 4445444 355
Q ss_pred eEEEeecCCCChhhHHHHHHHHHhh-C----CCCceEEEeChHHHHHHh
Q 017527 97 AVCLAVSGVNHPTDQQRILNWLRDI-F----PGNVRLYVHNDALAALAS 140 (370)
Q Consensus 97 ~IgIgvpG~~~~~~~~~l~~~L~~~-f----~~~~pV~V~NDa~aa~~g 140 (370)
.|+||-.......-...+.+.+.+. + ...++|.+.|++-|.+.+
T Consensus 581 ~IaIGn~s~et~~l~~~l~~~i~~~~~~~~~~~~i~~~iV~e~gAsvYs 629 (1030)
T 3psf_A 581 AIGINGPNPKTQKFYKRLQEVLHKKQIVDSRGHTIPIIYVEDEVAIRYQ 629 (1030)
T ss_dssp EEEECCSSTHHHHHHHHHHHHHHHTTCBCTTSCBCCEEECCCTTHHHHH
T ss_pred EEEECCCCHHHHHHHHHHHHHHHhhccccccCCCccEEEecchHHHHHH
Confidence 6677642221111112455555542 1 113789999999886653
No 96
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=86.17 E-value=34 Score=35.44 Aligned_cols=95 Identities=15% Similarity=0.082 Sum_probs=58.0
Q ss_pred CHHHHHHHHHHHHHHHHHH-cCCCccCcceEEEeecCCCChhhHHHHHHHHHhhCCCCceEEEeChHHHHHHhh-c-C--
Q 017527 69 GEDAARETIEKVMADALLK-SGSNRSAVRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASG-T-M-- 143 (370)
Q Consensus 69 ~~~~~~~~l~~~i~~~l~~-~~~~~~~v~~IgIgvpG~~~~~~~~~l~~~L~~~f~~~~pV~V~NDa~aa~~g~-~-~-- 143 (370)
+++++...+..-+.+.... .+ ..+..+.|++|..-+......+++..+.. +. ..+.+.|+..||+++- . .
T Consensus 114 speei~a~~L~~lk~~ae~~lg---~~v~~~VITVPa~f~~~qR~a~~~Aa~~A-Gl-~~~~li~EP~AAAlaygl~~~~ 188 (675)
T 3d2f_A 114 SATQLAAMFIDKVKDTVKQDTK---ANITDVCIAVPPWYTEEQRYNIADAARIA-GL-NPVRIVNDVTAAGVSYGIFKTD 188 (675)
T ss_dssp EHHHHHHHHHHHHHHHHHHHHC---SCCCEEEEEECTTCCHHHHHHHHHHHHHT-TC-EEEEEEEHHHHHHHHHHHHCSC
T ss_pred cHHHHHHHHHHHHHHHHHHHhC---CCcceEEEEECCCCCHHHHHHHHHHHHHc-CC-ceEEEEcchHHHHHHHhhhccc
Confidence 4666655555444443322 23 35678899999886665556677766554 42 4688999999987753 1 1
Q ss_pred -----C-CCCeEEEEEcccceeeeecc--CCce
Q 017527 144 -----G-KLHGCVLIAGTGTIAYGFTE--DGRD 168 (370)
Q Consensus 144 -----g-~~~~v~l~~GTGi~g~gii~--dG~l 168 (370)
. ....+++=+|.|+--..++. +|.+
T Consensus 189 ~~~~~~~~~~vlV~DlGGGT~Dvsv~~~~~g~~ 221 (675)
T 3d2f_A 189 LPEGEEKPRIVAFVDIGHSSYTCSIMAFKKGQL 221 (675)
T ss_dssp CCCSSSCCEEEEEEEECSSCEEEEEEEEETTEE
T ss_pred cccccCCCcEEEEEEcCCCcEEEEEEEecCCeE
Confidence 1 12456677888875544443 5654
No 97
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=85.48 E-value=8.4 Score=38.63 Aligned_cols=135 Identities=11% Similarity=0.058 Sum_probs=83.8
Q ss_pred CcEEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEEEEecCC--Cc----cccCHHHHHHHHHHHHHHH---HHHcCCC
Q 017527 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCS--NH----NSVGEDAARETIEKVMADA---LLKSGSN 91 (370)
Q Consensus 21 ~~~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~~~~~~~--n~----~~~~~~~~~~~l~~~i~~~---l~~~~~~ 91 (370)
...+-.||+|..++++.+++.. ++...++.+.+.... .. ... .++.++...++++++ ++..++
T Consensus 14 ~~~~AaIDiGSNS~rL~I~~~~------~~~~~~~~~~k~~vrLg~gl~~~g~L-s~eai~r~~~~L~~F~~~~~~~~v- 85 (508)
T 3hi0_A 14 LAPVSVIDIGSNSVRLVVYEGL------SRAPAVLFNEKVLCGLGKGLALTGRM-HEEGVTRALMALRRFHVLSEQAQA- 85 (508)
T ss_dssp CCCEEEEEECSSEEEEEEESCS------SSSCCEEEEEEEECCTTTTHHHHSSC-CHHHHHHHHHHHHHHHHHHHHTTC-
T ss_pred CCeEEEEEECCccEEEEEEEEc------CCCceEEEEEeEEeecccCccccCCc-CHHHHHHHHHHHHHHHHHHHhCCC-
Confidence 3578999999999999999871 112345555433221 00 001 234566666666665 444444
Q ss_pred ccCcceEEEeecCCCChhhHHHHHHHHHhhCCCCceEEEeChHHHH---HHhhc--CCCCCeEEEEEcccceeeeeccCC
Q 017527 92 RSAVRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAA---LASGT--MGKLHGCVLIAGTGTIAYGFTEDG 166 (370)
Q Consensus 92 ~~~v~~IgIgvpG~~~~~~~~~l~~~L~~~f~~~~pV~V~NDa~aa---~~g~~--~g~~~~v~l~~GTGi~g~gii~dG 166 (370)
+++. .++.+.+=+..+...+.+.+++.++ .||.|.+--.=| .+|.. ....+++++=+|.|+--..+..++
T Consensus 86 -~~v~--~vATsA~R~A~N~~~fl~~i~~~tG--~~ievIsG~EEA~l~~~gv~~~~~~~~~lvvDIGGGStEl~~~~~~ 160 (508)
T 3hi0_A 86 -QKLY--VLATAAAREAENGPDFIREAEAILG--CEIEVLSGEKEALYSAYGVISGFYQPDGIAGDLGGGSLELIDIKDK 160 (508)
T ss_dssp -SEEE--EEECTHHHHSTTHHHHHHHHHHHHT--SCEEECCHHHHHHHHHHHHHHHSSSCEEEEEEECSSCEEEEEEETT
T ss_pred -CeEE--EEeeHHHHcCcCHHHHHHHHHHHHC--CCeEEecHHHHHHHHHHHHHhcCCCCCeEEEEeCCCceEEEEeeCC
Confidence 2343 5666666444566789999999998 788887766533 22322 333567888899998766555566
Q ss_pred ce
Q 017527 167 RD 168 (370)
Q Consensus 167 ~l 168 (370)
++
T Consensus 161 ~~ 162 (508)
T 3hi0_A 161 SC 162 (508)
T ss_dssp EE
T ss_pred ee
Confidence 54
No 98
>3psi_A Transcription elongation factor SPT6; nucleus; 3.30A {Saccharomyces cerevisiae}
Probab=85.47 E-value=3.2 Score=46.11 Aligned_cols=101 Identities=10% Similarity=0.101 Sum_probs=58.4
Q ss_pred cEEEEEEcCc-----cceEEEEEeCCCCCCCCCCCCCeEEEEEecCCCccccCHHHHHHHHHHHHHHHHHHcCCCccCcc
Q 017527 22 EVILGLDGGT-----TSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVR 96 (370)
Q Consensus 22 ~~vlGVDiGg-----T~i~~~l~d~~~~~~~~~~~g~il~~~~~~~~n~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~v~ 96 (370)
..++|+|-|- |.++++++|. +|+++...+..+..+.....+...+.|. +++.++ ++.
T Consensus 516 ~~VlaldpG~r~~g~~g~k~a~vD~---------~G~vl~~~~i~~~~~~~~~~~~a~~~l~----~li~~~-----~~~ 577 (1219)
T 3psi_A 516 PKILSLTCGQGRFGADAIIAVYVNR---------KGDFIRDYKIVDNPFDKTNPEKFEDTLD----NIIQSC-----QPN 577 (1219)
T ss_dssp CCEEEEECTTCCTTTTCEEEEEECT---------TSCEEEEEEECSCTTCSSCSHHHHHHHH----HHHHHH-----CCS
T ss_pred CeEEEecCCCCCCCCCceEEEEECC---------CCCEEEEEEEcCCCCChhhHHHHHHHHH----HHHHHc-----CCc
Confidence 4799999983 2799999999 8999998877321101112333344444 445443 355
Q ss_pred eEEEeecCCCChhhHHHHHHHHHhh-C----CCCceEEEeChHHHHHHh
Q 017527 97 AVCLAVSGVNHPTDQQRILNWLRDI-F----PGNVRLYVHNDALAALAS 140 (370)
Q Consensus 97 ~IgIgvpG~~~~~~~~~l~~~L~~~-f----~~~~pV~V~NDa~aa~~g 140 (370)
.|+||-.......-...+.+.+++. + ...++|.+.||+-|.+.+
T Consensus 578 vIaIGn~sret~~l~~~l~~~i~~~~~~~~~~~~i~vviV~e~gAsvYs 626 (1219)
T 3psi_A 578 AIGINGPNPKTQKFYKRLQEVLHKKQIVDSRGHTIPIIYVEDEVAIRYQ 626 (1219)
T ss_dssp EEEECCSSTHHHHHHHHHHHHHHHTTCBCSSSCBCCEEECCCTTHHHHH
T ss_pred EEEECCCCHHHHHHHHHHHHHHHhhccccccCCCccEEEECchHHHHHh
Confidence 6677642211111112455555542 1 113789999999887653
No 99
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=84.98 E-value=5.8 Score=40.66 Aligned_cols=90 Identities=16% Similarity=0.048 Sum_probs=54.4
Q ss_pred CHHHHHHHHHHHHHHHHHH-cCCCccCcceEEEeecCCCChhhHHHHHHHHHhhCCCCceEEEeChHHHHHHhhcCC---
Q 017527 69 GEDAARETIEKVMADALLK-SGSNRSAVRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGTMG--- 144 (370)
Q Consensus 69 ~~~~~~~~l~~~i~~~l~~-~~~~~~~v~~IgIgvpG~~~~~~~~~l~~~L~~~f~~~~pV~V~NDa~aa~~g~~~g--- 144 (370)
+++++...+...+.+..+. .+ ..+..+.|++|-.-+......+++..+.. +. ..+.+.|+..||+++-...
T Consensus 111 ~~~ei~a~~L~~l~~~ae~~l~---~~v~~~VitVPa~f~d~qr~a~~~A~~~A-Gl-~v~~li~EP~AAAlay~l~~~~ 185 (605)
T 2kho_A 111 APPQISAEVLKKMKKTAEDYLG---EPVTEAVITVPAYFNDAQRQATKDAGRIA-GL-EVKRIINEPTAAALAYGLDKGT 185 (605)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHC---SCCCEEEEEECTTCCHHHHHHHHHHHHTT-TC-EEEEEEEHHHHHHHHTTTTSSS
T ss_pred cHHHHHHHHHHHHHHHHHHHhC---CCCcEEEEEECCCCCHHHHHHHHHHHHHc-CC-ceEEEecCHHHHHHHhhhcccC
Confidence 4666555544444333322 22 34677889999976655556677766544 42 4688999999998853221
Q ss_pred -CCCeEEEEEcccceeeeec
Q 017527 145 -KLHGCVLIAGTGTIAYGFT 163 (370)
Q Consensus 145 -~~~~v~l~~GTGi~g~gii 163 (370)
....+++=+|.|+-=..++
T Consensus 186 ~~~~vlV~DlGGGT~Dvsi~ 205 (605)
T 2kho_A 186 GNRTIAVYDLGGGTFDISII 205 (605)
T ss_dssp SEEEEEEEEECSSCEEEEEE
T ss_pred CCCEEEEEECCCCeEEEEEE
Confidence 1235667788887544444
No 100
>3t69_A Putative 2-dehydro-3-deoxygalactonokinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.55A {Sinorhizobium meliloti}
Probab=84.04 E-value=1.4 Score=42.02 Aligned_cols=34 Identities=21% Similarity=0.055 Sum_probs=27.0
Q ss_pred CCCcEEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEEEEec
Q 017527 19 GGREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAG 61 (370)
Q Consensus 19 ~~~~~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~~~~~ 61 (370)
.|..+.|+||-|.|++|+-+++. +|+++.+.+.+
T Consensus 4 ~~~~~~IavDWGTSnlRa~l~~~---------~g~vl~~~~~~ 37 (330)
T 3t69_A 4 TTAGYYAAVDWGTSSFRLWIIGE---------DGAVLAERRSA 37 (330)
T ss_dssp ----CEEEEEECSSCEEEEEECT---------TSCEEEEEEES
T ss_pred CCCCCEEEEEecchheehheecC---------CCCchhhhcCC
Confidence 44568999999999999999998 79999987654
No 101
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=83.92 E-value=2 Score=43.70 Aligned_cols=62 Identities=18% Similarity=0.207 Sum_probs=41.7
Q ss_pred cEEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEEEEecCCCccccCHHHHHHHHHHHHHHHHHHcCCC
Q 017527 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSN 91 (370)
Q Consensus 22 ~~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~~~~~~~n~~~~~~~~~~~~l~~~i~~~l~~~~~~ 91 (370)
.++.|+|||.|+|.+++.+. .+++-+++.....++.-.. +.-.=+..+.+.+++++++++..
T Consensus 2 ~~i~GiDIGnsttev~l~~~------~~g~i~~l~~g~~~ttGiK--Gt~~Ni~g~~~si~~a~~~a~~~ 63 (607)
T 1nbw_A 2 PLIAGIDIGNATTEVALASD------YPQARAFVASGIVATTGMK--GTRDNIAGTLAALEQALAKTPWS 63 (607)
T ss_dssp CEEEEEEECSSEEEEEEEEC------BTTBCCCCEEEEEECCSST--TSGGGHHHHHHHHHHHHTTSSCC
T ss_pred cEEEEEEecCceEEEEEEEE------cCCeEEEEEeecccCCccc--eeeeCHHHHHHHHHHHHHHhCCc
Confidence 58999999999999998876 1123477888877765442 32223445556667777666655
No 102
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=82.76 E-value=14 Score=37.08 Aligned_cols=136 Identities=13% Similarity=0.118 Sum_probs=85.1
Q ss_pred cEEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEEEEecCC------CccccCHHHHHHHHHHHHHHHHHHcC-CCccC
Q 017527 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCS------NHNSVGEDAARETIEKVMADALLKSG-SNRSA 94 (370)
Q Consensus 22 ~~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~~~~~~~------n~~~~~~~~~~~~l~~~i~~~l~~~~-~~~~~ 94 (370)
..+..||+|..++|+.+++.. ++.-+++.+.+.+.. ..... .++.++...++++++.+... ...++
T Consensus 11 ~~~AaIDiGSNSirL~I~~~~------~~~~~~l~~~k~~vrLg~g~~~~g~L-s~eai~r~~~~L~~f~~~~~~~~v~~ 83 (513)
T 1u6z_A 11 QEFAAVDLGSNSFHMVIARVV------DGAMQIIGRLKQRVHLADGLGPDNML-SEEAMTRGLNCLSLFAERLQGFSPAS 83 (513)
T ss_dssp -CEEEEEECSSCEEEEEEEEE------TTEEEEEEEEEECCCTGGGBCTTCCB-CHHHHHHHHHHHHHHHHHTTTCCGGG
T ss_pred CeEEEEEeccccEEEEEEEEc------CCeeEEEEeeEEEEeccCcccccCCc-CHHHHHHHHHHHHHHHHHHHhCCCCE
Confidence 368999999999999999861 001234444444321 00112 24667778888888876653 22233
Q ss_pred cceEEEeecCCCChhhHHHHHHHHHhhCCCCceEEEeChHHHH---HHhh--cCC-CCCeEEEEEcccceeeeeccCCce
Q 017527 95 VRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAA---LASG--TMG-KLHGCVLIAGTGTIAYGFTEDGRD 168 (370)
Q Consensus 95 v~~IgIgvpG~~~~~~~~~l~~~L~~~f~~~~pV~V~NDa~aa---~~g~--~~g-~~~~v~l~~GTGi~g~gii~dG~l 168 (370)
+ ..++.+.+=+..+...+.+.+++.++ .+|.|.+-..=| .+|. ... ..+++++=+|.|+--..+..++++
T Consensus 84 v--~~vATsA~R~A~N~~~fl~~i~~~tG--~~i~vIsG~eEA~l~~~gv~~~~~~~~~~lviDIGGGStEl~~~~~~~~ 159 (513)
T 1u6z_A 84 V--CIVGTHTLRQALNATDFLKRAEKVIP--YPIEIISGNEEARLIFMGVEHTQPEKGRKLVIDIGGGSTELVIGENFEP 159 (513)
T ss_dssp E--EEEECHHHHHCTTHHHHHHHHTTTCS--SCEEECCHHHHHHHHHHHHHHHSCCCSCEEEEEECSSCEEEEEEETTEE
T ss_pred E--EEEecHHHHcCcCHHHHHHHHHHHHC--CCEEEeCHHHHHHHHHHHHHhhccCCCCEEEEEECCCcEEEEEEeCCee
Confidence 3 35666666444566789999999998 888888776533 2232 122 236889999999866655455654
No 103
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=82.17 E-value=13 Score=35.27 Aligned_cols=134 Identities=16% Similarity=0.082 Sum_probs=79.5
Q ss_pred cEEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEEEEecCCCcc------ccCHHHHHHHHHHHHHHHHHHcCCCccCc
Q 017527 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHN------SVGEDAARETIEKVMADALLKSGSNRSAV 95 (370)
Q Consensus 22 ~~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~~~~~~~n~~------~~~~~~~~~~l~~~i~~~l~~~~~~~~~v 95 (370)
..+..||+|..++|+.+.+..+ ++.-+++.+.+.+..--. .. .++.++...++++++.+.... ..+
T Consensus 16 ~~~A~IDiGSNsiRL~I~~~~~-----~~~~~~i~~~k~~vrLg~g~~~~g~l-s~eai~r~~~aL~~f~~~~~~--~~v 87 (343)
T 3cer_A 16 VTVAGIDCGTNSIRLKIARVDA-----DGMHEVVPRILRVIRLGQDVDKTHRF-ADEALERAYVAAREFAGVIAE--HPI 87 (343)
T ss_dssp EEEEEEEECSSCEEEEEEEEET-----TEEEEEEEEEEECCCTTTTHHHHSSC-CHHHHHHHHHHHHHHHHHHTT--SCC
T ss_pred CeEEEEEcccceeEeEEEEEcC-----CCCEEEEEEEEEEeeCCCCccccCCc-CHHHHHHHHHHHHHHHHHHHH--CCC
Confidence 3688999999999999998610 001123444433321000 01 235677777777777655432 112
Q ss_pred c-eEEEeecCCCChhhHHHHHHHHHhhCCCCceEEEeChHHHH---HHhh--cCC----CCCeEEEEEcccceeeeeccC
Q 017527 96 R-AVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAA---LASG--TMG----KLHGCVLIAGTGTIAYGFTED 165 (370)
Q Consensus 96 ~-~IgIgvpG~~~~~~~~~l~~~L~~~f~~~~pV~V~NDa~aa---~~g~--~~g----~~~~v~l~~GTGi~g~gii~d 165 (370)
. -..++.+.+=+..+...+.+.+++.++ .++.|.+-..=| .+|. ..+ ..+.+++=+|.|+--..+..+
T Consensus 88 ~~v~~vATsA~R~A~N~~~fl~~v~~~tG--i~ieVIsG~eEA~l~~~gv~~~~~~~~~~~~~lviDIGGGStel~~~~~ 165 (343)
T 3cer_A 88 DGLRFVATSATRDAENREEFEDEIERILG--VRPEVIPGTEEADLSFLGATSVVNRDDLPAPYLVVDLGGGSTELVIGGD 165 (343)
T ss_dssp SEEEEEECHHHHHCTTHHHHHHHHHHHHS--SCCEECCHHHHHHHHHHHHHSSCCTTTCCSSEEEEEECSSCEEEEECCC
T ss_pred CeEEEEecHHHHcCcCHHHHHHHHHHHHC--CCEEEeCHHHHHHHHHHHHHhhCccccccCCEEEEEeCCCceEEEEeec
Confidence 2 345667666444566789999999998 777777665433 3332 222 246888999999866544433
No 104
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=78.72 E-value=4.9 Score=40.87 Aligned_cols=68 Identities=21% Similarity=0.152 Sum_probs=44.1
Q ss_pred cEEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEEEEecCCCccccCHHHHHHHHHHHHHHHHHHcCCCccCcc
Q 017527 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVR 96 (370)
Q Consensus 22 ~~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~~~~~~~n~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~v~ 96 (370)
.++.|||||-+.|.+++.+.. .+++-+++.....+++-.. +-.+=+.-+...+++++++.+.+.+++.
T Consensus 2 ~~i~gvdign~tte~~la~~~-----~~~~~~f~~s~~~~ttg~k--gt~~n~~g~~~~l~~~~~~~~~~~~~~~ 69 (610)
T 2d0o_A 2 RYIAGIDIGNSSTEVALATLD-----EAGALTITHSALAETTGIK--GTLRNVFGIQEALALVARGAGIAVSDIS 69 (610)
T ss_dssp EEEEEEEECSSEEEEEEEEEC-----TTCCEEEEEEEEEECCSST--TSTTHHHHHHHHHHHHHHHHTCCGGGEE
T ss_pred cEEEEEecCCcchheeeeeec-----CCCceEEeeccccccCCcc--CcHHHHHHHHHHHHHHHHHcCCChhhce
Confidence 589999999999988887651 0012267777777766443 3333355566677778877777655443
No 105
>4h0p_A Acetate kinase; askha (acetate and sugar kinas actin) superfamily, ribonuclease H-like fold, transferase; 1.89A {Cryptococcus neoformans}
Probab=76.73 E-value=1.8 Score=42.54 Aligned_cols=70 Identities=20% Similarity=0.139 Sum_probs=51.0
Q ss_pred hHHHHHHHHhcC------CHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCC-CCccEEEEcCcccCcccccchHHHHHH
Q 017527 240 LVPVVVSCAEAG------DEVANKILQDSVEELALSVKAVVQRLSLSGEDGK-HSFPLVMVGGVLEANRRWDIGREVVKC 312 (370)
Q Consensus 240 ~~~~v~~~A~~G------D~~A~~il~~a~~~Lg~~l~~vv~~l~~~~~~~~-~P~~VVlgGgv~~~~~~~~l~~~v~~~ 312 (370)
..++|.+.+.+| |+.|+.+++-++..+.+.|.++...++- +..+ ..+.||+.||+.+..+.+ .+.+.+.
T Consensus 301 D~R~i~~~~~~g~~~~~gd~~A~lA~d~f~yri~k~IGa~aa~L~~--~~~~G~vDaIVFTGGIGEns~~i--R~~i~~~ 376 (438)
T 4h0p_A 301 NFGHIIQNLDPSKCSEEDHEKAKLTYAVFLDRLLNFVAQYLFKLLS--EVPIESIDGLVFSGGIGEKGAEL--RRDVLKK 376 (438)
T ss_dssp CHHHHHHTTSTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT--TSCGGGSCEEEEEHHHHHHCHHH--HHHHHHH
T ss_pred CHHHHHHhhhccCCCcCCCHHHHHHHHHHHHHHHHHHHHHHHHhCc--cccCCCCCEEEECCccccCcHHH--HHHHHHh
Confidence 347777777775 9999999999999999999999988840 0000 158999999998655443 5555554
Q ss_pred H
Q 017527 313 I 313 (370)
Q Consensus 313 l 313 (370)
+
T Consensus 377 l 377 (438)
T 4h0p_A 377 L 377 (438)
T ss_dssp T
T ss_pred H
Confidence 4
No 106
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=76.38 E-value=22 Score=35.81 Aligned_cols=96 Identities=16% Similarity=0.201 Sum_probs=75.0
Q ss_pred HHHHHHHHHHHHHHHHH-HcCCCccCc--ceEEEeecCCCChhhHHHHHHHHHhhCCCCce-EEEeChHHHHHHhhcCCC
Q 017527 70 EDAARETIEKVMADALL-KSGSNRSAV--RAVCLAVSGVNHPTDQQRILNWLRDIFPGNVR-LYVHNDALAALASGTMGK 145 (370)
Q Consensus 70 ~~~~~~~l~~~i~~~l~-~~~~~~~~v--~~IgIgvpG~~~~~~~~~l~~~L~~~f~~~~p-V~V~NDa~aa~~g~~~g~ 145 (370)
..+.++.++.+++.++. +.++++++. ..|-+..|-..+....+.+.+.|=+.|+ +| +++.+++.+++.+. |.
T Consensus 170 ~~~~wdd~e~iw~~~~~~~L~i~~~d~~~~pvlltep~~~~~~~re~~~eilFE~f~--~pa~~~~~~~vla~ya~--G~ 245 (593)
T 4fo0_A 170 LTAVLADIEVIWSHAIQKYLEIPLKDLKYYRCILLIPDIYNKQHVKELVNMILMKMG--FSGIVVHQESVCATYGS--GL 245 (593)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCCCGGGGGGCEEEEEECSSCCHHHHHHHHHHHHHTTC--CSEEEEEEHHHHHHHHH--TC
T ss_pred hhcCHHHHHHHHHHHHHHhcCCCchhccCCcEEEEeCCCCCHHHHHHHHHHHHHhcC--CCeEEeechHHHHHHHC--CC
Confidence 56677888888888885 467766553 3577888988888888889999999998 55 89999999998864 55
Q ss_pred CCeEEEEEcccceeeeeccCCceE
Q 017527 146 LHGCVLIAGTGTIAYGFTEDGRDA 169 (370)
Q Consensus 146 ~~~v~l~~GTGi~g~gii~dG~l~ 169 (370)
..++||=+|.+.--.--|.||...
T Consensus 246 ~tglVVDiG~~~T~v~PV~dG~~l 269 (593)
T 4fo0_A 246 SSTCIVDVGDQKTSVCCVEDGVSH 269 (593)
T ss_dssp SEEEEEEECSSCEEEEEEESSCBC
T ss_pred CceEEEEeCCCceeeeeeECCEEe
Confidence 789999999987555556788763
No 107
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=74.25 E-value=1.1 Score=43.28 Aligned_cols=69 Identities=20% Similarity=0.323 Sum_probs=17.2
Q ss_pred EEEeecCCCChhhHHHHHHHHHhhCCCCce-EEEeChHHHHHHhhcCCCCCeEEEEEcccceeeeeccCCceEe
Q 017527 98 VCLAVSGVNHPTDQQRILNWLRDIFPGNVR-LYVHNDALAALASGTMGKLHGCVLIAGTGTIAYGFTEDGRDAR 170 (370)
Q Consensus 98 IgIgvpG~~~~~~~~~l~~~L~~~f~~~~p-V~V~NDa~aa~~g~~~g~~~~v~l~~GTGi~g~gii~dG~l~~ 170 (370)
+-+..|-...+.....+.+.+-+.|+ +| +++.+++.+++++. |...+++|-+|.|.--...+.+|....
T Consensus 107 vllt~p~~~~~~~r~~~~e~~fe~~~--~~~~~~~~~~~~a~~a~--g~~~~lVVDiG~g~T~v~pv~~G~~~~ 176 (394)
T 1k8k_B 107 ILLTEPPMNPTKNREKIVEVMFETYQ--FSGVYVAIQAVLTLYAQ--GLLTGVVVDSGDGVTHICPVYEGFSLP 176 (394)
T ss_dssp ---------------------------------------------------CCEEEECSSCEEEECEETTEECS
T ss_pred EEEEECCCCCHHHHHHHHHHhhhccC--CCeEEEEhhHHHHHHhC--CCceEEEEEcCCCceEeeeeECCEEcc
Confidence 55666666655555667777767776 55 88999999888753 446788999999976555667887643
No 108
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=73.03 E-value=18 Score=30.67 Aligned_cols=57 Identities=18% Similarity=0.121 Sum_probs=41.0
Q ss_pred EEEEEEcCccceEEEEEeCCCCCCCCCCCCC------eEEEEEecCCCccccCHHHHHHHHHHHHHHHHHHcCC
Q 017527 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLP------VLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGS 90 (370)
Q Consensus 23 ~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~------il~~~~~~~~n~~~~~~~~~~~~l~~~i~~~l~~~~~ 90 (370)
.+||||-|-+++=+++++. +|+ .+......++.. .+..+-+..|.+-+.++++++..
T Consensus 2 rILGIDPGl~~tG~gvi~~---------~g~~~~~~~~v~~G~I~t~~~--~~~~~RL~~I~~~l~~~i~~~~P 64 (166)
T 4ep4_A 2 VVAGIDPGITHLGLGVVAV---------EGKGALKARLLHGEVVKTSPQ--EPAKERVGRIHARVLEVLHRFRP 64 (166)
T ss_dssp EEEEEECCSSEEEEEEEEE---------CSSSSSCEEEEEEEEEECCTT--SCHHHHHHHHHHHHHHHHHHHCC
T ss_pred EEEEEccccCceEEEEEEe---------cCCccceEEEEEeCeEECCCC--CCHHHHHHHHHHHHHHHHHHhCC
Confidence 5899999999999999997 454 344444444332 25666778888888888887653
No 109
>3nuw_A 2-OXO-3-deoxygalactonate kinase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.09A {Klebsiella pneumoniae} PDB: 3r1x_A*
Probab=71.60 E-value=4.1 Score=38.05 Aligned_cols=33 Identities=12% Similarity=0.029 Sum_probs=28.2
Q ss_pred CCCcEEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEEEEec
Q 017527 19 GGREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAG 61 (370)
Q Consensus 19 ~~~~~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~~~~~ 61 (370)
.|..+.|+||-|.|++|+-+++. |+++.+.+.+
T Consensus 3 ~m~~~~IavDWGTs~lRa~l~~~----------g~vl~~~~~~ 35 (295)
T 3nuw_A 3 AMTARYIAIDWGSTNLRAWLYQG----------EECLESRQSE 35 (295)
T ss_dssp GGGCEEEEEEECSSCEEEEEEET----------TEEEEEEEES
T ss_pred CCCccEEEEEecchheeeeeecC----------CceehhhcCC
Confidence 45668999999999999999985 8999887654
No 110
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=69.45 E-value=39 Score=33.75 Aligned_cols=93 Identities=16% Similarity=0.062 Sum_probs=64.1
Q ss_pred HHHHHHHHHHHHHH-cCCCccCcceEEEeecCCCChhhHHHHHHHHHhhCCCCceEEEeChHHHHHHhhcCCCCCeEEEE
Q 017527 74 RETIEKVMADALLK-SGSNRSAVRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGTMGKLHGCVLI 152 (370)
Q Consensus 74 ~~~l~~~i~~~l~~-~~~~~~~v~~IgIgvpG~~~~~~~~~l~~~L~~~f~~~~pV~V~NDa~aa~~g~~~g~~~~v~l~ 152 (370)
.+.++.+++.++.+ .++.+.+-..|-+..|-...+..++.+.+.+-+.|+. -.+++.+++.+++.+. |...++||-
T Consensus 92 wd~~E~iw~~~f~~~L~v~p~~~~pvlltep~~n~~~~Re~~~eilFE~f~v-pav~l~~~~vlalya~--G~~tglVVD 168 (498)
T 3qb0_A 92 WDTAQEQWQWALQNELYLNSNSGIPALLTEPVWNSTENRKKSLEVLLEGMQF-EACYLAPTSTCVSFAA--GRPNCLVVD 168 (498)
T ss_dssp HHHHHHHHHHHHHHTSCCSCCTTCCEEEEECTTCCHHHHHHHHHHHHTTSCC-SEEEEEEHHHHHHHHH--TCSSEEEEE
T ss_pred HHHHHHHHHHHHHhhhCCCcccCCceEEEeCCCCcHHHHHHHHHHHHhhcCC-CeEeecchHHHHHHHc--CCCeEEEEE
Confidence 34455556566543 4554433214677778777776778888988788882 3499999999988864 446789999
Q ss_pred EcccceeeeeccCCceE
Q 017527 153 AGTGTIAYGFTEDGRDA 169 (370)
Q Consensus 153 ~GTGi~g~gii~dG~l~ 169 (370)
+|.|.--...+.+|...
T Consensus 169 iG~g~T~vvPI~~G~~l 185 (498)
T 3qb0_A 169 IGHDTCSVSPIVDGMTL 185 (498)
T ss_dssp ECSSCEEEEEEETTEEC
T ss_pred cCCCcEEEEEEeCCEEc
Confidence 99997555566788654
No 111
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=69.35 E-value=9.5 Score=32.13 Aligned_cols=56 Identities=14% Similarity=0.067 Sum_probs=39.8
Q ss_pred EEEEEEcCccceEEEEEeCCCCCCCCCCCCC---eEEEEEecCCCccccCHHHHHHHHHHHHHHHHHHcCC
Q 017527 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLP---VLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGS 90 (370)
Q Consensus 23 ~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~---il~~~~~~~~n~~~~~~~~~~~~l~~~i~~~l~~~~~ 90 (370)
.+||||-|-+++=+++++. +|+ ++......++ . .+...-+..|.+-+.++++++..
T Consensus 2 ~ILGIDPGl~~tG~gvi~~---------~g~~~~~v~~G~i~t~-~--~~~~~Rl~~i~~~l~~~i~~~~P 60 (158)
T 1hjr_A 2 IILGIDPGSRVTGYGVIRQ---------VGRQLSYLGSGCIRTK-V--DDLPSRLKLIYAGVTEIITQFQP 60 (158)
T ss_dssp EEEEEECCSSEEEEEEEEE---------ETTEEEEEEEEEEECC-C--SCHHHHHHHHHHHHHHHHHHHCC
T ss_pred EEEEEccCCCCeeEEEEEe---------cCCeEEEEEeeEEECC-C--CCHHHHHHHHHHHHHHHHHHcCC
Confidence 4899999999999999986 455 3333444443 2 24555677788888888887764
No 112
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=69.22 E-value=34 Score=35.41 Aligned_cols=98 Identities=13% Similarity=0.175 Sum_probs=72.8
Q ss_pred CHHHHHHHHHHHHHHHHH--HcCCCccC--cceEEEeecCCCChhhHHHHHHHHHhhCCCCceEEEeChHHHHHHhhcCC
Q 017527 69 GEDAARETIEKVMADALL--KSGSNRSA--VRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGTMG 144 (370)
Q Consensus 69 ~~~~~~~~l~~~i~~~l~--~~~~~~~~--v~~IgIgvpG~~~~~~~~~l~~~L~~~f~~~~pV~V~NDa~aa~~g~~~g 144 (370)
+.++..+.++.+++.++. +.++.+.. =..|-+..|-...+...+.+.+.+-+.|+. -.+++.+++.+++.+. |
T Consensus 191 s~q~~WD~mE~Iw~y~f~~~~L~V~p~~~~e~pVLLTEPplnp~~~REkm~EIlFE~fgv-pavyl~~qavlAlyas--G 267 (655)
T 4am6_A 191 SLAELISDVTKLLEHALNSETLNVKPTKFNQYKVVLVIPDIFKKSHVETFIRVLLTELQF-QAVAIIQESLATCYGA--G 267 (655)
T ss_dssp SHHHHHHHHHHHHHHHHBSSSCBCCGGGGGGCEEEEEECTTCCHHHHHHHHHHHHHTSCC-SEEEEEEHHHHHHHHS--C
T ss_pred cccccHHHHHHHHHHHhccccccccccccCCCcEEEEeCCCCCHHHHHHHHHHHHhhcCC-CeeeeccHHHHHHHhC--C
Confidence 356778888888888885 45665542 245778888888777788899999888983 3589999999988754 4
Q ss_pred -CCCeEEEEEcccceeeeeccCCceE
Q 017527 145 -KLHGCVLIAGTGTIAYGFTEDGRDA 169 (370)
Q Consensus 145 -~~~~v~l~~GTGi~g~gii~dG~l~ 169 (370)
...++||-+|.|.--...+.+|...
T Consensus 268 l~ttGLVVDiG~g~T~VvPV~eG~vl 293 (655)
T 4am6_A 268 ISTSTCVVNIGAAETRIACVDEGTVL 293 (655)
T ss_dssp CSSCEEEEEECSSCEEEEEEETTEEC
T ss_pred CCCceEEEcCCCceEEEEEEeCCEEE
Confidence 3578999999997555556788653
No 113
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=68.99 E-value=35 Score=33.25 Aligned_cols=92 Identities=20% Similarity=0.264 Sum_probs=64.9
Q ss_pred HHHHHHHHHHHH-HcCCCccCcceEEEeecCCCChhhHHHHHHHHHhhCCCCce-EEEeChHHHHHHhhcC------CCC
Q 017527 75 ETIEKVMADALL-KSGSNRSAVRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVR-LYVHNDALAALASGTM------GKL 146 (370)
Q Consensus 75 ~~l~~~i~~~l~-~~~~~~~~v~~IgIgvpG~~~~~~~~~l~~~L~~~f~~~~p-V~V~NDa~aa~~g~~~------g~~ 146 (370)
+.++.+++.++. ..+..+.+ ..|-+..|-...+..++.+.+.+=+.|+ .| +++.+++.+++.+... +..
T Consensus 103 d~~e~iw~~~~~~~L~v~~~~-~pvlltep~~~~~~~re~~~ei~FE~~~--~p~v~l~~~~vla~~a~G~~~~~~~~~~ 179 (427)
T 3dwl_A 103 DHMERFWQQSLFKYLRCEPED-HYFLLTEPPLNPPENRENTAEIMFESFN--CAGLYIAVQAVLALAASWTSSKVTDRSL 179 (427)
T ss_dssp HHHHHHHHHHHHTTSCCCGGG-CEEEEEECTTCCHHHHHHHHHHHTTTTC--CSEEEEEEHHHHHHHGGGGSTTTCSCCC
T ss_pred HHHHHHHHHHHhHhhCCCCcC-CcEEEEcCCCCCHHHHHHHHHHHHHhcc--CceeeecchHHHHHHhcCCcccccCCCc
Confidence 445555555553 34444433 3677888887877777888888878888 55 9999999999886432 146
Q ss_pred CeEEEEEcccceeeeeccCCceE
Q 017527 147 HGCVLIAGTGTIAYGFTEDGRDA 169 (370)
Q Consensus 147 ~~v~l~~GTGi~g~gii~dG~l~ 169 (370)
.+++|-+|.|.--...+.+|...
T Consensus 180 tglVVDiG~g~T~v~PV~~G~~l 202 (427)
T 3dwl_A 180 TGTVVDSGDGVTHIIPVAEGYVI 202 (427)
T ss_dssp CEEEEEESSSCEEEEEEETTEEC
T ss_pred eEEEEECCCCceEEEEEECCEEe
Confidence 78999999997655566788764
No 114
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=50.88 E-value=1.5e+02 Score=27.92 Aligned_cols=126 Identities=13% Similarity=0.033 Sum_probs=67.2
Q ss_pred cEEEEEEcCccceEEEEEeCCCCCCCCCCCCCeEEE-----EEecC--CCccccCHHHHHHHHHHHHHHHHHHcCCCccC
Q 017527 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLAR-----AAAGC--SNHNSVGEDAARETIEKVMADALLKSGSNRSA 94 (370)
Q Consensus 22 ~~vlGVDiGgT~i~~~l~d~~~~~~~~~~~g~il~~-----~~~~~--~n~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~ 94 (370)
.+++.||+|.+.+|+.+.+... +....++.+ .+..+ .... ..++.+-+.|. ++.+ . ....
T Consensus 3 ~~~avID~GSns~Rl~I~~~~~-----~~~~~~i~~~~~~~~k~~~gLs~~~-~~~~~~~~~l~----~f~~-~--~~~~ 69 (353)
T 3aap_A 3 SCIAVIDAGSTGSRLHIYSYDT-----DDTNTPIHIEEIWNKKIKPGFASIQ-PNSVTIDAYLT----MLLA-D--APIH 69 (353)
T ss_dssp EEEEEEEECSSCEEEEEEEEEE-----CTTSCEEEEEEEEEEEESSCGGGSC-CSHHHHHHHHH----HHHT-T--CSCC
T ss_pred CEEEEEEcCCCCeEEEEEEEcC-----CCCCceeEeeeeeeeccCCChhhcC-CCHHHHHHHHH----HHHH-H--HhcC
Confidence 4789999999999999997621 001233333 22221 1111 23444433333 3433 1 1122
Q ss_pred cc-eEEEeecCCCChhh--HHHHHHHHHhhC-------CCCceEEEeChHHHHHH---hh--cCC----C--CCeEEEEE
Q 017527 95 VR-AVCLAVSGVNHPTD--QQRILNWLRDIF-------PGNVRLYVHNDALAALA---SG--TMG----K--LHGCVLIA 153 (370)
Q Consensus 95 v~-~IgIgvpG~~~~~~--~~~l~~~L~~~f-------~~~~pV~V~NDa~aa~~---g~--~~g----~--~~~v~l~~ 153 (370)
+. -..++.+|+=...+ ...+.+.+++.+ + .+|.|..-..=|.+ +. ..+ . +...++=+
T Consensus 70 ~~~v~~~ATaa~R~a~n~~~~~~l~~v~~~~~~~~~~~g--~~v~VIsG~eEa~~~~~gv~~~l~~~~~~~~~t~~v~Di 147 (353)
T 3aap_A 70 NIPVYFYATAGMRLLPQSQQKKYYDELEYWFRQQSQWQL--VEAKTITGNDEALFDWLAVNYKLDTLKSVQNKSVGVMDM 147 (353)
T ss_dssp SEEEEEEECHHHHTSCHHHHHHHHHHHHHHHHTCSSEEE--EEEEECCHHHHHHHHHHHHHHHTTCSSSCCSSCEEEEEE
T ss_pred CCcEEEEecHHHhcCcHHHHHHHHHHHHHHHhhCCCCCC--CeEEECChHHHHHHHHHHHHHHhhhccccccccEEEEEe
Confidence 22 34567788732223 566777777776 5 67887776653322 21 122 2 24788889
Q ss_pred cccceeeee
Q 017527 154 GTGTIAYGF 162 (370)
Q Consensus 154 GTGi~g~gi 162 (370)
|.|+-=..+
T Consensus 148 GGGStei~~ 156 (353)
T 3aap_A 148 GGASVQIVF 156 (353)
T ss_dssp CSSEEEEEE
T ss_pred CCCceEEEE
Confidence 988754433
No 115
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=49.77 E-value=1.7e+02 Score=27.87 Aligned_cols=52 Identities=13% Similarity=0.114 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHHHHH
Q 017527 253 EVANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCIL 314 (370)
Q Consensus 253 ~~A~~il~~a~~~Lg~~l~~vv~~l~~~~~~~~~P~~VVlgGgv~~~~~~~~l~~~v~~~l~ 314 (370)
..|..++.-.++.++........+.+. ..||++||....++.+ .+.+.+.+.
T Consensus 280 DIa~gll~sVa~~I~~lA~l~A~~~~i--------~~IvftGgfla~n~~~--~~~L~~~l~ 331 (360)
T 2i7n_A 280 DLARATLVTITNNIGSIARMCALNENI--------DRVVFVGNFLRINMVS--MKLLAYAMD 331 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTC--------CCEEEESGGGCSSSHH--HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCC--------CeEEEeCcccccCHHH--HHHHHHHHh
Confidence 346677777777766666556677774 5899999955556554 777777764
No 116
>1xho_A Chorismate mutase; southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI, structural genomics; 2.20A {Clostridium thermocellum} SCOP: d.79.1.2
Probab=41.28 E-value=64 Score=26.67 Aligned_cols=35 Identities=14% Similarity=0.274 Sum_probs=32.5
Q ss_pred CHHHHHHHHHHHHHHHHHHcCCCccCcceEEEeec
Q 017527 69 GEDAARETIEKVMADALLKSGSNRSAVRAVCLAVS 103 (370)
Q Consensus 69 ~~~~~~~~l~~~i~~~l~~~~~~~~~v~~IgIgvp 103 (370)
+++++.+...+++++++++.++.+++|.+|-+++.
T Consensus 45 t~e~I~~At~ELl~eii~~N~l~~eDIvSv~FTvT 79 (148)
T 1xho_A 45 TADEIVAETQKLLKEMAEKNGLEEDDIISIIFTVT 79 (148)
T ss_dssp SHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEEC
T ss_pred CHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEEEeC
Confidence 68999999999999999999999999999999864
No 117
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=38.96 E-value=1e+02 Score=28.57 Aligned_cols=20 Identities=35% Similarity=0.321 Sum_probs=17.7
Q ss_pred cEEEEEEcCccceEEEEEeC
Q 017527 22 EVILGLDGGTTSTVCICMPV 41 (370)
Q Consensus 22 ~~vlGVDiGgT~i~~~l~d~ 41 (370)
..++-+|+||..+.+.++..
T Consensus 191 ~~~~vvDiGggttdi~i~~~ 210 (377)
T 2ych_A 191 RVFLVLDIGAESTSLVLLRG 210 (377)
T ss_dssp CEEEEEEECSSCEEEEEEET
T ss_pred CeEEEEEECCCcEEEEEEEC
Confidence 45889999999999999976
No 118
>1dbf_A Protein (chorismate mutase); shikimate pathway, isomerase; 1.30A {Bacillus subtilis} SCOP: d.79.1.2 PDB: 1com_A 2chs_A 2cht_A* 1fnj_A 1fnk_A
Probab=38.90 E-value=81 Score=25.45 Aligned_cols=35 Identities=9% Similarity=0.196 Sum_probs=32.5
Q ss_pred CHHHHHHHHHHHHHHHHHHcCCCccCcceEEEeec
Q 017527 69 GEDAARETIEKVMADALLKSGSNRSAVRAVCLAVS 103 (370)
Q Consensus 69 ~~~~~~~~l~~~i~~~l~~~~~~~~~v~~IgIgvp 103 (370)
+++++.+...+++++++++.++.+++|.+|-+++.
T Consensus 16 t~e~I~~at~eLl~~i~~~N~l~~~dIvSv~FT~T 50 (127)
T 1dbf_A 16 TEEEILQKTKQLLEKIIEENHTKPEDVVQMLLSAT 50 (127)
T ss_dssp CHHHHHHHHHHHHHHHHHHHCCCGGGEEEEEEEEC
T ss_pred CHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEEEeC
Confidence 68999999999999999999999999999999864
No 119
>1ufy_A Chorismate mutase; shikimate pathway, mutant, riken structur genomics/proteomics initiative, RSGI, structural genomics,; HET: MES; 0.96A {Thermus thermophilus} SCOP: d.79.1.2 PDB: 1ode_A* 1ui9_A*
Probab=35.00 E-value=1e+02 Score=24.72 Aligned_cols=35 Identities=17% Similarity=0.291 Sum_probs=32.3
Q ss_pred CHHHHHHHHHHHHHHHHHHcCCCc-cCcceEEEeec
Q 017527 69 GEDAARETIEKVMADALLKSGSNR-SAVRAVCLAVS 103 (370)
Q Consensus 69 ~~~~~~~~l~~~i~~~l~~~~~~~-~~v~~IgIgvp 103 (370)
+++++.+...+++++++++.++.+ ++|.+|-+++.
T Consensus 15 ~~e~I~~at~eLl~~i~~~N~l~~~~divSv~FT~T 50 (122)
T 1ufy_A 15 TPEAIHQATRELLLKMLEANGIQSYEELAAVIFTVT 50 (122)
T ss_dssp SHHHHHHHHHHHHHHHHHHHTCCCGGGEEEEEEEEC
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCChHhEEEEEEEeC
Confidence 689999999999999999999999 99999999864
No 120
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=28.69 E-value=1.2e+02 Score=31.93 Aligned_cols=51 Identities=14% Similarity=0.158 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCccEEEEcCcccCcccccchHHHHHHHHh
Q 017527 254 VANKILQDSVEELALSVKAVVQRLSLSGEDGKHSFPLVMVGGVLEANRRWDIGREVVKCILR 315 (370)
Q Consensus 254 ~A~~il~~a~~~Lg~~l~~vv~~l~~~~~~~~~P~~VVlgGgv~~~~~~~~l~~~v~~~l~~ 315 (370)
.|...-+-.++.|...+..+....+ ...|+|+|||+.. .. |.+.+.+.+++
T Consensus 669 IAasFq~ala~~L~~~~~~a~~~~g--------~~~VvLsGGVa~N-~~--Lr~~L~~~l~~ 719 (761)
T 3vth_A 669 ISAKFHNTVVNFTYDLANLIRKETG--------INKVVLSGGSFQN-RY--LLRRLIEKLSL 719 (761)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHC--------CCEEEEESGGGGS-HH--HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC--------CCEEEEECcHHHH-HH--HHHHHHHHHHh
Confidence 4555555566666666666666666 4789999999964 34 37888888876
No 121
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=22.27 E-value=63 Score=29.57 Aligned_cols=84 Identities=14% Similarity=0.008 Sum_probs=45.1
Q ss_pred HHHHcCCCccCcceEEEeecC--CCCh---hhHHHHHHHHHhhCCC----------CceEEEeChHHHHHHhhc--C-CC
Q 017527 84 ALLKSGSNRSAVRAVCLAVSG--VNHP---TDQQRILNWLRDIFPG----------NVRLYVHNDALAALASGT--M-GK 145 (370)
Q Consensus 84 ~l~~~~~~~~~v~~IgIgvpG--~~~~---~~~~~l~~~L~~~f~~----------~~pV~V~NDa~aa~~g~~--~-g~ 145 (370)
.+.+.+..+.++ .+.+|+|= +.+. .+...+++.++..+.. -..|.+.+...+|+++.. . ..
T Consensus 85 aL~~~~~~~~~~-~lv~glP~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~e~~aa~~~~~~~~~~~ 163 (320)
T 2zgy_A 85 ALLTSGLPVSEV-DIVCTLPLTEYYDRNNQPNTENIERKKANFRKKITLNGGDTFTIKDVKVMPESIPAGYEVLQELDEL 163 (320)
T ss_dssp HHHHHSCCSCEE-EEEEEECHHHHBCTTSSBCHHHHHHHHHHTTSCEEETTBCCCEEEEEEEEESSHHHHHHHHHHSCTT
T ss_pred HHHHcCCCCceE-EEEEcCCHHHHccCCCcccHHHHHHHHHhhcCcEecCCCcEEEEEEEEEecCcHHHHHhhhccccCC
Confidence 444455443344 48889984 3221 1223454444322210 025677777787766432 1 12
Q ss_pred CCeEEEEEcccceeeeeccCCce
Q 017527 146 LHGCVLIAGTGTIAYGFTEDGRD 168 (370)
Q Consensus 146 ~~~v~l~~GTGi~g~gii~dG~l 168 (370)
...+++=+|.|+.-..++.+|.+
T Consensus 164 ~~~~vvDiGggttd~~v~~~g~~ 186 (320)
T 2zgy_A 164 DSLLIIDLGGTTLDISQVMGKLS 186 (320)
T ss_dssp CEEEEEEECSSCEEEEEEEGGGC
T ss_pred CCEEEEEcCCCeEEEEEEeCCee
Confidence 34566778988877777777654
Done!