Query 017528
Match_columns 370
No_of_seqs 198 out of 1997
Neff 9.4
Searched_HMMs 46136
Date Fri Mar 29 09:23:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017528.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017528hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00411 nodulin MtN21 family 100.0 1.5E-37 3.3E-42 289.9 33.5 325 8-336 10-336 (358)
2 PRK11453 O-acetylserine/cystei 100.0 7.3E-32 1.6E-36 248.5 30.0 280 12-331 5-290 (299)
3 PRK11272 putative DMT superfam 100.0 6.4E-32 1.4E-36 248.0 29.5 278 13-331 10-288 (292)
4 PRK11689 aromatic amino acid e 100.0 2.7E-31 5.8E-36 244.2 27.0 285 9-331 2-290 (295)
5 PRK15430 putative chlorampheni 100.0 4E-31 8.6E-36 243.1 27.2 281 4-329 1-286 (296)
6 PRK10532 threonine and homoser 100.0 2.1E-30 4.5E-35 238.0 29.2 278 7-332 8-285 (293)
7 TIGR00950 2A78 Carboxylate/Ami 100.0 1.3E-30 2.8E-35 235.8 26.4 258 23-323 1-259 (260)
8 TIGR00817 tpt Tpt phosphate/ph 100.0 8.2E-29 1.8E-33 228.7 27.3 278 17-330 8-295 (302)
9 TIGR03340 phn_DUF6 phosphonate 100.0 2.1E-27 4.6E-32 216.9 28.0 274 12-325 2-280 (281)
10 PF06027 DUF914: Eukaryotic pr 100.0 2.4E-26 5.2E-31 210.3 29.3 295 11-333 13-310 (334)
11 PTZ00343 triose or hexose phos 100.0 3.9E-26 8.4E-31 214.1 28.3 282 11-329 49-349 (350)
12 TIGR00688 rarD rarD protein. T 99.9 1.7E-25 3.6E-30 201.8 25.1 248 11-303 2-255 (256)
13 COG0697 RhaT Permeases of the 99.9 5E-23 1.1E-27 188.8 29.6 283 8-329 4-288 (292)
14 COG2962 RarD Predicted permeas 99.9 1.3E-22 2.8E-27 176.9 24.5 282 8-333 4-288 (293)
15 COG5006 rhtA Threonine/homoser 99.9 1.9E-22 4.1E-27 171.1 23.9 274 12-332 13-286 (292)
16 TIGR00776 RhaT RhaT L-rhamnose 99.9 2E-21 4.2E-26 177.8 24.7 274 12-328 2-288 (290)
17 KOG4510 Permease of the drug/m 99.9 1.9E-23 4.2E-28 178.2 4.8 288 10-328 37-325 (346)
18 PF08449 UAA: UAA transporter 99.8 2.5E-18 5.4E-23 158.7 26.9 278 28-333 17-302 (303)
19 KOG2765 Predicted membrane pro 99.8 1.4E-18 3E-23 155.7 16.6 296 9-330 12-392 (416)
20 KOG1441 Glucose-6-phosphate/ph 99.8 2.8E-18 6.2E-23 155.2 11.5 273 26-334 32-313 (316)
21 COG2510 Predicted membrane pro 99.7 7.1E-17 1.5E-21 123.0 11.7 135 11-153 3-138 (140)
22 KOG2234 Predicted UDP-galactos 99.7 6.2E-14 1.3E-18 126.2 29.1 297 11-331 15-325 (345)
23 KOG1580 UDP-galactose transpor 99.7 1.2E-14 2.5E-19 122.5 19.3 257 40-327 53-312 (337)
24 KOG2766 Predicted membrane pro 99.7 6.7E-17 1.5E-21 137.5 5.6 266 25-328 32-299 (336)
25 PF04142 Nuc_sug_transp: Nucle 99.6 6.5E-14 1.4E-18 124.2 19.3 230 71-319 13-244 (244)
26 KOG1444 Nucleotide-sugar trans 99.6 1.7E-12 3.6E-17 115.4 25.1 286 11-334 12-306 (314)
27 KOG1443 Predicted integral mem 99.6 2.3E-12 5E-17 113.0 22.6 269 23-326 29-313 (349)
28 COG2510 Predicted membrane pro 99.5 2.1E-13 4.6E-18 104.2 13.9 135 190-327 4-138 (140)
29 PF00892 EamA: EamA-like trans 99.5 2.8E-14 6.1E-19 113.8 9.4 125 21-153 1-125 (126)
30 KOG1581 UDP-galactose transpor 99.4 1.2E-11 2.7E-16 108.6 17.4 264 39-332 50-317 (327)
31 PF00892 EamA: EamA-like trans 99.4 6.8E-13 1.5E-17 105.7 8.5 125 199-327 1-125 (126)
32 KOG3912 Predicted integral mem 99.4 8.7E-12 1.9E-16 108.0 14.3 274 24-327 16-333 (372)
33 KOG1442 GDP-fucose transporter 99.4 1.5E-12 3.2E-17 112.3 8.9 268 40-339 61-338 (347)
34 PF06800 Sugar_transport: Suga 99.3 9.4E-10 2E-14 97.4 23.1 252 38-325 10-268 (269)
35 TIGR00950 2A78 Carboxylate/Ami 99.3 6.5E-11 1.4E-15 106.9 15.4 133 9-150 126-260 (260)
36 PRK13499 rhamnose-proton sympo 99.3 4.9E-09 1.1E-13 96.6 26.8 302 9-330 5-343 (345)
37 COG5070 VRG4 Nucleotide-sugar 99.3 7.7E-11 1.7E-15 98.9 12.2 276 27-334 22-302 (309)
38 PF13536 EmrE: Multidrug resis 99.2 3.4E-11 7.4E-16 94.3 8.5 104 45-155 2-107 (113)
39 KOG1583 UDP-N-acetylglucosamin 99.2 2.2E-10 4.8E-15 99.2 13.8 264 41-328 34-314 (330)
40 KOG4314 Predicted carbohydrate 99.2 2E-10 4.3E-15 94.6 11.3 209 87-328 64-276 (290)
41 PF05653 Mg_trans_NIPA: Magnes 99.2 2.7E-09 5.8E-14 97.6 19.0 273 8-328 4-292 (300)
42 PF03151 TPT: Triose-phosphate 99.2 4E-10 8.8E-15 93.2 12.1 138 190-328 1-153 (153)
43 PRK10532 threonine and homoser 99.2 1.9E-09 4.1E-14 99.1 16.9 136 10-155 147-282 (293)
44 PRK11272 putative DMT superfam 99.1 2.2E-09 4.8E-14 98.6 15.3 137 10-154 149-285 (292)
45 PLN00411 nodulin MtN21 family 99.1 3.4E-09 7.3E-14 99.5 16.2 137 11-156 189-330 (358)
46 PRK15430 putative chlorampheni 99.1 1.8E-09 3.9E-14 99.4 13.5 138 186-327 5-144 (296)
47 PRK11689 aromatic amino acid e 99.0 7.1E-09 1.5E-13 95.4 14.8 133 10-154 155-287 (295)
48 TIGR03340 phn_DUF6 phosphonate 99.0 8.4E-09 1.8E-13 94.3 15.1 133 191-328 3-135 (281)
49 TIGR00688 rarD rarD protein. T 99.0 4.3E-09 9.4E-14 94.8 12.5 136 189-327 2-141 (256)
50 KOG1582 UDP-galactose transpor 99.0 2.4E-08 5.2E-13 86.5 14.5 276 23-332 55-336 (367)
51 PRK11453 O-acetylserine/cystei 98.9 3.8E-08 8.2E-13 90.8 16.1 139 10-154 142-287 (299)
52 PRK02971 4-amino-4-deoxy-L-ara 98.8 5.7E-08 1.2E-12 77.2 11.5 120 189-329 2-123 (129)
53 TIGR00803 nst UDP-galactose tr 98.8 4.2E-08 9.1E-13 86.5 11.3 210 104-326 6-222 (222)
54 TIGR00817 tpt Tpt phosphate/ph 98.8 3.4E-08 7.5E-13 91.2 10.6 140 9-154 143-293 (302)
55 COG4975 GlcU Putative glucose 98.8 1.7E-09 3.7E-14 92.3 1.1 279 11-328 2-285 (288)
56 PF13536 EmrE: Multidrug resis 98.8 3.5E-08 7.7E-13 77.1 8.3 106 224-330 3-108 (113)
57 PF03151 TPT: Triose-phosphate 98.7 6.2E-07 1.3E-11 74.0 14.1 133 12-151 1-150 (153)
58 KOG2922 Uncharacterized conser 98.7 1.1E-07 2.4E-12 84.8 9.4 272 8-327 18-305 (335)
59 PRK15051 4-amino-4-deoxy-L-ara 98.7 4.9E-07 1.1E-11 70.1 12.0 69 79-153 40-108 (111)
60 COG0697 RhaT Permeases of the 98.6 1.9E-06 4.2E-11 78.7 15.7 134 10-154 153-287 (292)
61 TIGR00776 RhaT RhaT L-rhamnose 98.6 8E-07 1.7E-11 81.5 12.6 129 10-154 151-288 (290)
62 PTZ00343 triose or hexose phos 98.6 1.8E-06 3.9E-11 81.3 15.2 138 10-153 193-347 (350)
63 COG2962 RarD Predicted permeas 98.5 9.1E-07 2E-11 78.2 11.2 140 188-330 6-146 (293)
64 PRK02971 4-amino-4-deoxy-L-ara 98.5 4.2E-06 9.1E-11 66.6 12.3 119 11-154 2-122 (129)
65 PRK15051 4-amino-4-deoxy-L-ara 98.4 1.1E-06 2.3E-11 68.2 8.2 67 261-327 42-108 (111)
66 COG5006 rhtA Threonine/homoser 98.4 4.7E-06 1E-10 71.9 11.9 137 9-154 146-282 (292)
67 PF06027 DUF914: Eukaryotic pr 98.3 1.5E-05 3.3E-10 73.7 14.2 140 8-155 165-306 (334)
68 PF06379 RhaT: L-rhamnose-prot 98.1 0.0017 3.7E-08 59.3 21.2 300 9-329 5-341 (344)
69 KOG4510 Permease of the drug/m 98.0 3.9E-06 8.4E-11 73.0 2.1 135 186-328 35-169 (346)
70 PF06800 Sugar_transport: Suga 97.9 0.00015 3.1E-09 64.7 11.9 116 8-131 135-250 (269)
71 PF04657 DUF606: Protein of un 97.9 0.00017 3.7E-09 58.2 10.7 132 190-325 2-138 (138)
72 PRK10452 multidrug efflux syst 97.8 5.3E-05 1.2E-09 59.2 6.7 67 263-329 37-104 (120)
73 PF08449 UAA: UAA transporter 97.7 0.00056 1.2E-08 63.2 13.1 137 12-155 155-298 (303)
74 PF04657 DUF606: Protein of un 97.7 0.00072 1.6E-08 54.6 11.5 130 13-151 3-138 (138)
75 PF05653 Mg_trans_NIPA: Magnes 97.7 9.9E-05 2.1E-09 67.7 6.6 118 186-328 4-122 (300)
76 PRK09541 emrE multidrug efflux 97.6 0.0002 4.4E-09 55.2 6.9 67 263-329 37-104 (110)
77 PRK10452 multidrug efflux syst 97.6 0.00024 5.3E-09 55.5 7.2 68 81-154 35-103 (120)
78 COG2076 EmrE Membrane transpor 97.6 0.00028 6.1E-09 53.3 6.7 67 82-154 36-103 (106)
79 PRK09541 emrE multidrug efflux 97.6 0.00034 7.5E-09 53.9 7.3 67 82-154 36-103 (110)
80 COG3238 Uncharacterized protei 97.6 0.0011 2.3E-08 53.6 10.4 137 188-327 4-145 (150)
81 PRK10650 multidrug efflux syst 97.5 0.0018 3.8E-08 49.8 10.5 64 83-152 42-106 (109)
82 PF10639 UPF0546: Uncharacteri 97.5 0.0004 8.7E-09 53.4 6.5 110 17-152 2-112 (113)
83 PRK11431 multidrug efflux syst 97.5 0.00063 1.4E-08 51.9 7.5 66 83-154 36-102 (105)
84 KOG2765 Predicted membrane pro 97.3 0.0031 6.8E-08 57.9 10.8 142 8-155 244-391 (416)
85 PRK11431 multidrug efflux syst 97.2 0.00096 2.1E-08 50.9 6.2 65 263-327 36-101 (105)
86 COG2076 EmrE Membrane transpor 97.1 0.0014 3E-08 49.6 6.1 65 265-329 39-104 (106)
87 PRK10650 multidrug efflux syst 97.1 0.0019 4E-08 49.6 6.5 64 264-327 43-107 (109)
88 KOG1441 Glucose-6-phosphate/ph 97.1 0.002 4.3E-08 59.1 7.6 137 9-153 161-306 (316)
89 PRK13499 rhamnose-proton sympo 97.0 0.035 7.7E-07 51.7 14.9 145 8-154 171-341 (345)
90 PF00893 Multi_Drug_Res: Small 96.9 0.0024 5.3E-08 47.7 5.9 57 83-145 36-93 (93)
91 PF04142 Nuc_sug_transp: Nucle 96.9 0.0017 3.7E-08 57.8 5.9 76 255-331 17-92 (244)
92 PF07857 DUF1632: CEO family ( 96.9 0.0011 2.3E-08 58.9 4.3 132 190-333 1-139 (254)
93 KOG1581 UDP-galactose transpor 96.8 0.013 2.9E-07 52.5 10.4 139 8-154 169-313 (327)
94 PF00893 Multi_Drug_Res: Small 96.8 0.0021 4.5E-08 48.1 4.5 56 264-319 37-93 (93)
95 COG3238 Uncharacterized protei 96.8 0.021 4.5E-07 46.3 10.4 141 9-152 3-144 (150)
96 PF07857 DUF1632: CEO family ( 96.7 0.017 3.7E-07 51.3 10.4 193 12-215 1-209 (254)
97 PF10639 UPF0546: Uncharacteri 96.7 0.015 3.3E-07 44.7 8.4 109 196-326 3-112 (113)
98 TIGR00803 nst UDP-galactose tr 96.2 0.027 5.9E-07 49.4 8.5 59 87-151 163-221 (222)
99 COG4975 GlcU Putative glucose 96.1 0.0029 6.2E-08 54.9 1.7 132 190-331 3-139 (288)
100 KOG2234 Predicted UDP-galactos 96.0 0.34 7.3E-06 44.7 14.6 138 191-329 17-165 (345)
101 KOG1580 UDP-galactose transpor 95.8 0.087 1.9E-06 45.6 9.2 137 10-154 171-313 (337)
102 KOG1444 Nucleotide-sugar trans 95.6 0.13 2.8E-06 46.7 10.3 139 9-154 155-300 (314)
103 COG5070 VRG4 Nucleotide-sugar 95.3 0.074 1.6E-06 45.6 7.1 137 11-154 155-296 (309)
104 KOG2922 Uncharacterized conser 95.2 0.0046 9.9E-08 55.8 -0.3 126 184-333 16-141 (335)
105 KOG4314 Predicted carbohydrate 91.6 0.086 1.9E-06 44.3 1.2 61 269-329 66-126 (290)
106 KOG1443 Predicted integral mem 91.5 1.7 3.7E-05 39.4 9.2 122 208-330 35-158 (349)
107 PF06379 RhaT: L-rhamnose-prot 91.2 1.6 3.4E-05 40.4 9.0 140 186-329 4-154 (344)
108 KOG1582 UDP-galactose transpor 91.2 2 4.3E-05 38.3 9.2 140 10-156 189-334 (367)
109 KOG3912 Predicted integral mem 90.4 4.6 9.9E-05 36.3 10.7 138 9-152 174-332 (372)
110 KOG4831 Unnamed protein [Funct 88.0 0.93 2E-05 34.0 4.1 111 15-153 7-124 (125)
111 PF07168 Ureide_permease: Urei 87.6 0.75 1.6E-05 41.6 4.1 111 16-129 1-125 (336)
112 KOG1442 GDP-fucose transporter 85.5 0.86 1.9E-05 40.6 3.3 139 9-154 183-327 (347)
113 PRK02237 hypothetical protein; 83.3 2.1 4.6E-05 32.4 4.0 41 290-330 67-107 (109)
114 PRK02237 hypothetical protein; 82.6 16 0.00034 27.8 8.4 49 100-154 56-105 (109)
115 PF02694 UPF0060: Uncharacteri 81.9 2.1 4.5E-05 32.3 3.6 40 291-330 66-105 (107)
116 PF02694 UPF0060: Uncharacteri 77.1 6.3 0.00014 29.8 4.8 54 95-154 49-103 (107)
117 PF07168 Ureide_permease: Urei 77.0 3 6.4E-05 37.9 3.6 130 195-327 2-145 (336)
118 PRK06638 NADH:ubiquinone oxido 76.7 48 0.001 28.5 12.7 31 297-327 133-165 (198)
119 PF06570 DUF1129: Protein of u 76.6 49 0.0011 28.5 12.2 47 73-123 144-190 (206)
120 KOG2766 Predicted membrane pro 74.5 4.9 0.00011 35.6 4.2 136 8-153 163-298 (336)
121 KOG4831 Unnamed protein [Funct 73.9 8.2 0.00018 29.1 4.7 55 272-326 68-123 (125)
122 PF04342 DUF486: Protein of un 71.3 38 0.00082 25.7 7.6 48 99-152 58-106 (108)
123 PF05297 Herpes_LMP1: Herpesvi 70.4 1.4 3E-05 39.3 0.0 14 138-151 81-94 (381)
124 COG4657 RnfA Predicted NADH:ub 66.1 43 0.00094 27.5 7.5 54 183-236 126-184 (193)
125 PF04342 DUF486: Protein of un 65.8 7 0.00015 29.5 2.8 31 296-326 76-106 (108)
126 PF00909 Ammonium_transp: Ammo 63.4 1.2E+02 0.0025 29.2 11.6 212 115-360 162-398 (399)
127 KOG1583 UDP-N-acetylglucosamin 61.0 68 0.0015 29.0 8.5 134 10-154 163-314 (330)
128 COG3169 Uncharacterized protei 60.8 25 0.00054 26.2 4.9 33 295-327 82-114 (116)
129 PF01102 Glycophorin_A: Glycop 58.2 12 0.00025 29.4 3.1 11 314-324 75-85 (122)
130 COG1742 Uncharacterized conser 55.8 22 0.00049 26.7 4.0 44 287-330 63-106 (109)
131 TIGR00836 amt ammonium transpo 54.3 2.1E+02 0.0046 27.6 18.3 65 257-321 281-363 (403)
132 COG1742 Uncharacterized conser 54.2 45 0.00097 25.2 5.3 48 102-155 57-105 (109)
133 PRK13108 prolipoprotein diacyl 51.7 2.5E+02 0.0054 27.7 21.6 23 308-330 254-276 (460)
134 PF08507 COPI_assoc: COPI asso 51.5 31 0.00067 27.5 4.7 16 312-327 89-104 (136)
135 PF15099 PIRT: Phosphoinositid 50.7 8.6 0.00019 30.0 1.2 16 257-272 58-73 (129)
136 COG0004 AmtB Ammonia permease 49.7 1.8E+02 0.0039 28.0 10.0 243 10-286 133-384 (409)
137 PF15345 TMEM51: Transmembrane 46.5 22 0.00048 31.0 3.2 22 314-335 67-88 (233)
138 COG3086 RseC Positive regulato 43.4 14 0.00031 29.6 1.4 18 286-303 78-95 (150)
139 PF15102 TMEM154: TMEM154 prot 40.8 24 0.00051 28.5 2.3 17 316-332 69-85 (146)
140 COG2814 AraJ Arabinose efflux 40.4 3.4E+02 0.0075 26.1 12.0 29 304-332 360-388 (394)
141 TIGR03644 marine_trans_1 proba 37.9 3.8E+02 0.0083 25.9 20.2 66 259-324 297-364 (404)
142 PF03547 Mem_trans: Membrane t 37.8 3.5E+02 0.0076 25.4 12.6 10 262-271 69-78 (385)
143 COG4858 Uncharacterized membra 37.0 2.6E+02 0.0057 23.7 9.5 105 12-124 101-206 (226)
144 TIGR01647 ATPase-IIIA_H plasma 32.9 6.1E+02 0.013 26.8 12.5 113 38-151 625-751 (755)
145 PF13038 DUF3899: Domain of un 32.5 32 0.00069 25.3 1.8 20 309-328 3-22 (92)
146 PF09656 PGPGW: Putative trans 30.5 1.6E+02 0.0035 19.3 4.7 45 138-214 5-49 (53)
147 PRK12585 putative monovalent c 29.9 3E+02 0.0066 23.4 7.2 18 186-203 43-60 (197)
148 PF07444 Ycf66_N: Ycf66 protei 29.9 46 0.00099 24.2 2.1 23 307-329 4-26 (84)
149 COG5336 Uncharacterized protei 29.7 1.6E+02 0.0035 22.5 5.1 9 294-302 57-65 (116)
150 PF08693 SKG6: Transmembrane a 28.5 43 0.00094 20.5 1.5 18 314-331 21-38 (40)
151 PF11044 TMEMspv1-c74-12: Plec 28.3 29 0.00064 21.5 0.8 18 308-325 2-19 (49)
152 PRK06638 NADH:ubiquinone oxido 27.7 3.9E+02 0.0084 22.8 11.0 26 38-63 54-79 (198)
153 KOG1479 Nucleoside transporter 27.5 5.7E+02 0.012 24.7 13.0 19 310-328 184-202 (406)
154 PF10754 DUF2569: Protein of u 27.0 2.6E+02 0.0057 22.5 6.5 31 184-214 116-146 (149)
155 PF15471 TMEM171: Transmembran 26.1 68 0.0015 28.7 2.9 20 310-329 161-180 (319)
156 PF11381 DUF3185: Protein of u 25.8 53 0.0011 22.1 1.7 18 138-155 1-18 (59)
157 PF12868 DUF3824: Domain of un 24.6 94 0.002 24.9 3.3 11 313-323 9-19 (137)
158 PRK10666 ammonium transporter; 24.5 6.6E+02 0.014 24.5 18.9 52 188-240 304-355 (428)
159 TIGR00892 2A0113 monocarboxyla 24.2 6.5E+02 0.014 24.3 13.7 8 141-148 279-286 (455)
160 TIGR01167 LPXTG_anchor LPXTG-m 24.2 1.1E+02 0.0024 17.4 2.8 13 309-321 11-23 (34)
161 PF13994 PgaD: PgaD-like prote 24.1 2E+02 0.0043 23.0 5.2 23 310-332 63-85 (138)
162 PF04550 Phage_holin_2: Phage 24.1 2.9E+02 0.0064 20.2 5.9 34 122-155 24-57 (89)
163 PF04246 RseC_MucC: Positive r 24.1 44 0.00094 26.6 1.3 15 288-302 73-87 (135)
164 KOG3817 Uncharacterized conser 22.3 5.3E+02 0.012 24.4 7.9 82 23-109 201-284 (452)
165 TIGR00893 2A0114 d-galactonate 22.3 5.9E+02 0.013 23.1 12.2 15 201-215 42-56 (399)
166 COG1007 NuoN NADH:ubiquinone o 22.1 7.8E+02 0.017 24.4 15.5 25 254-278 398-422 (475)
167 PF05545 FixQ: Cbb3-type cytoc 22.1 95 0.0021 19.7 2.4 17 316-332 18-34 (49)
168 PF15108 TMEM37: Voltage-depen 21.5 3.7E+02 0.0081 22.1 6.0 51 183-233 116-168 (184)
169 PLN00028 nitrate transmembrane 21.1 7.7E+02 0.017 24.0 11.5 14 313-326 417-430 (476)
170 KOG1623 Multitransmembrane pro 21.0 5.6E+02 0.012 22.8 7.6 29 186-214 125-153 (243)
171 PF11139 DUF2910: Protein of u 20.9 5.4E+02 0.012 22.1 11.0 44 110-153 160-210 (214)
172 PF06570 DUF1129: Protein of u 20.9 5.3E+02 0.012 22.0 11.6 13 139-151 89-101 (206)
No 1
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=100.00 E-value=1.5e-37 Score=289.93 Aligned_cols=325 Identities=27% Similarity=0.536 Sum_probs=252.6
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhhc-ccCCCCCHHHHHHHHHHHHHHH
Q 017528 8 DKQRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEW-KKAPPLSFLTFCKIFFLSLIGI 86 (370)
Q Consensus 8 ~~~~~~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~ 86 (370)
++.+.++.+++..+.++...++.|...+.|++|..+.++|+.++.++++++.+.+++ +.+++.+++++....+.|+++
T Consensus 10 ~~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g- 88 (358)
T PLN00411 10 REAVFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLG- 88 (358)
T ss_pred hccchHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHH-
Confidence 456789999999999999999999999999999999999999999999998876544 233444678889999999998
Q ss_pred HHHHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhccCCcccccccc
Q 017528 87 TFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHH 166 (370)
Q Consensus 87 ~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~~~~~~ 166 (370)
...+.+++.+++|+++++++++.++.|+++.+++++++.|+++.++|+++.+++|++++++|+.++..++++.....+++
T Consensus 89 ~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~ 168 (358)
T PLN00411 89 SMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSP 168 (358)
T ss_pred HHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCccccccccc
Confidence 77888999999999999999999999999999999996555555555555599999999999999886444321100000
Q ss_pred ccccCCCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhcCC-Cc
Q 017528 167 HIFGHHNSQQIHGHVSSGKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERD-PH 245 (370)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~ 245 (370)
......++..+..+ ...+...|+++++.++++||+|++.+|+..++++++...+++++..+.+...+..+..+.+ ..
T Consensus 169 ~~~~~~~~~~~~~~--~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~ 246 (358)
T PLN00411 169 PYLNFRQLSPPLSS--SNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPS 246 (358)
T ss_pred ccccccccccccCC--CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcc
Confidence 00000000000000 2234467999999999999999999999988887656777788877777766666555432 22
Q ss_pred ccccccchhhHHHHHHHHHHHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHH
Q 017528 246 EWVLGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYA 325 (370)
Q Consensus 246 ~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l 325 (370)
.|.......+..+++.+++ +.++|.+|++++++.+|++++...+++|+++++++++++||++++.+++|+++|+.|+++
T Consensus 247 ~~~~~~~~~~~~i~y~~i~-t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l 325 (358)
T PLN00411 247 VWIIHFDITLITIVTMAII-TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYA 325 (358)
T ss_pred cceeccchHHHHHHHHHHH-HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHH
Confidence 2322222234457777765 678999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCcchhhhh
Q 017528 326 VLWGKSKEQKM 336 (370)
Q Consensus 326 ~~~~~~~~~~~ 336 (370)
..+.++||.++
T Consensus 326 ~~~~~~~~~~~ 336 (358)
T PLN00411 326 VMWGKANEEKD 336 (358)
T ss_pred HHhhhhhhhhh
Confidence 98866655333
No 2
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=100.00 E-value=7.3e-32 Score=248.48 Aligned_cols=280 Identities=17% Similarity=0.182 Sum_probs=217.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 017528 12 PYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGITFSLD 91 (370)
Q Consensus 12 ~~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 91 (370)
..++.++++++||.++++.|...++ ++|..+.++|+.++.+.++++.. ++ +.++ ......|++.....+.
T Consensus 5 ~~l~~l~~~~~Wg~~~~~~k~~~~~-~~p~~~~~~R~~~a~~~l~~~~~---~~---~~~~---~~~~~~g~~~~~~~~~ 74 (299)
T PRK11453 5 DGVLALLVVVVWGLNFVVIKVGLHN-MPPLMLAGLRFMLVAFPAIFFVA---RP---KVPL---NLLLGYGLTISFGQFA 74 (299)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHhc-CCHHHHHHHHHHHHHHHHHHHhc---CC---CCch---HHHHHHHHHHHHHHHH
Confidence 4567889999999999999999986 99999999999998776655432 11 1122 2344456555455666
Q ss_pred HHHHHHhh-cChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhccCCcccccccccccc
Q 017528 92 LYGIALIY-TSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHIFG 170 (370)
Q Consensus 92 ~~~~al~~-~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~~~~~~~~~~ 170 (370)
+++.+++| .+++.++++.++.|+++.+++++++|||++.+ ++++++++++|+.++...+.+
T Consensus 75 ~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~------~~~~~~l~~~Gv~ll~~~~~~------------ 136 (299)
T PRK11453 75 FLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGK------QLAGIALAIFGVLVLIEDSLN------------ 136 (299)
T ss_pred HHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHH------HHHHHHHHHHhHHHhccccCC------------
Confidence 77889998 58899999999999999999999999999999 999999999999988742110
Q ss_pred CCCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc--hhHHHHHHHHHHHHHHHHHHHhcCCC---c
Q 017528 171 HHNSQQIHGHVSSGKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSK--LLFTTLQCFLSSIQSFAIAIALERDP---H 245 (370)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~---~ 245 (370)
.......|+++++.++++|++|.+.+|+..++.+++ .....+....+.+.........+.+. .
T Consensus 137 ------------~~~~~~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (299)
T PRK11453 137 ------------GQHVAMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIH 204 (299)
T ss_pred ------------CcchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhh
Confidence 112234799999999999999999999987654432 23334444444443333333333321 1
Q ss_pred ccccccchhhHHHHHHHHHHHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHH
Q 017528 246 EWVLGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYA 325 (370)
Q Consensus 246 ~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l 325 (370)
.+...+...|..++++|+++++++|.+|++++++.++.+++.+.+++|+++.+++++++||++++.+++|++++++|+++
T Consensus 205 ~~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l 284 (299)
T PRK11453 205 SLVTIDMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYI 284 (299)
T ss_pred hhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHH
Confidence 11122345688999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HhcCcc
Q 017528 326 VLWGKS 331 (370)
Q Consensus 326 ~~~~~~ 331 (370)
..+.++
T Consensus 285 ~~~~~~ 290 (299)
T PRK11453 285 NVFGLR 290 (299)
T ss_pred Hhcchh
Confidence 877554
No 3
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=100.00 E-value=6.4e-32 Score=248.04 Aligned_cols=278 Identities=12% Similarity=0.112 Sum_probs=231.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017528 13 YLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGITFSLDL 92 (370)
Q Consensus 13 ~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 92 (370)
.+..+...++||.++++.|...++ ++|..++++|+.++.++++++...++ ++ ..+++++......|.++...++.+
T Consensus 10 ~~~~~~~~~iWg~~~~~~K~~~~~-~~p~~~~~~R~~~a~l~ll~~~~~~~-~~--~~~~~~~~~~~~~g~~~~~~~~~~ 85 (292)
T PRK11272 10 FGALFALYIIWGSTYLVIRIGVES-WPPLMMAGVRFLIAGILLLAFLLLRG-HP--LPTLRQWLNAALIGLLLLAVGNGM 85 (292)
T ss_pred HHHHHHHHHHHhhHHHHHHHHhcc-CCHHHHHHHHHHHHHHHHHHHHHHhC-CC--CCcHHHHHHHHHHHHHHHHHHHHH
Confidence 456678889999999999998885 99999999999999999888765422 22 224677888888998876778889
Q ss_pred HHHHH-hhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhccCCccccccccccccC
Q 017528 93 YGIAL-IYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHIFGH 171 (370)
Q Consensus 93 ~~~al-~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~~~~~~~~~~~ 171 (370)
++++. ++++++.++++.++.|+++.+++++ +|||++++ +++|+.++++|+.++...+ .
T Consensus 86 ~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~------~~~~~~la~~Gv~ll~~~~-~------------- 144 (292)
T PRK11272 86 VTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKL------EWLGIAIGLAGIVLLNSGG-N------------- 144 (292)
T ss_pred HHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchh------HHHHHHHHHHhHHHHhcCc-c-------------
Confidence 99999 9999999999999999999999986 69999999 9999999999999876421 1
Q ss_pred CCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhcCCCccccccc
Q 017528 172 HNSQQIHGHVSSGKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDPHEWVLGW 251 (370)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 251 (370)
. .....|++++++++++||.+.+..||..++ ++...+.+++..+.+...+.....+.+.. ...+
T Consensus 145 -----------~-~~~~~G~l~~l~a~~~~a~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 208 (292)
T PRK11272 145 -----------L-SGNPWGAILILIASASWAFGSVWSSRLPLP--VGMMAGAAEMLAAGVVLLIASLLSGERLT--ALPT 208 (292)
T ss_pred -----------c-ccchHHHHHHHHHHHHHHHHHHHHHhcCCC--cchHHHHHHHHHHHHHHHHHHHHcCCccc--ccCC
Confidence 1 122469999999999999999999997543 33566778888888877776654433211 1123
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHhcCcc
Q 017528 252 NVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVLWGKS 331 (370)
Q Consensus 252 ~~~~~~l~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~~ 331 (370)
...|..+++.+++++++++.+|++++++.++++++.+.+++|+++.+++++++||++++.+++|+++++.|+++..+.++
T Consensus 209 ~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~~ 288 (292)
T PRK11272 209 LSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKY 288 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 45688899999999999999999999999999999999999999999999999999999999999999999999876433
No 4
>PRK11689 aromatic amino acid exporter; Provisional
Probab=100.00 E-value=2.7e-31 Score=244.17 Aligned_cols=285 Identities=10% Similarity=0.055 Sum_probs=215.3
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHH
Q 017528 9 KQRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGITF 88 (370)
Q Consensus 9 ~~~~~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 88 (370)
+.++++++++++++||.+++..|...++ ++|..+.++|+.++.+++.++.. +++.++ + ++.....+.++...
T Consensus 2 ~~~~~l~~l~a~~~Wg~~~~~~k~~~~~-~~P~~~~~~R~~~a~l~l~~~~~---~~~~~~---~-~~~~~~~~~l~~~~ 73 (295)
T PRK11689 2 SQKATLIGLIAILLWSTMVGLIRGVSES-LGPVGGAAMIYSVSGLLLLLTVG---FPRLRQ---F-PKRYLLAGGLLFVS 73 (295)
T ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHcc-CChHHHHHHHHHHHHHHHHHHcc---cccccc---c-cHHHHHHHhHHHHH
Confidence 4577889999999999999999999997 99999999999999988887531 111111 1 22233445555577
Q ss_pred HHHHHHHHHhh----cChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhccCCcccccc
Q 017528 89 SLDLYGIALIY----TSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLC 164 (370)
Q Consensus 89 ~~~~~~~al~~----~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~~~~ 164 (370)
++.+++.+++| .++..++++.++.|+++.+++++++|||++++ +++|++++++|++++..++. ..+..+
T Consensus 74 ~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~------~~~g~~l~~~Gv~li~~~~~-~~~~~~ 146 (295)
T PRK11689 74 YEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWL------LIPGLLLALAGVAWVLGGDN-GLSLAE 146 (295)
T ss_pred HHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHH------HHHHHHHHHHhHhheecCCc-cchhhh
Confidence 78888888865 57788899999999999999999999999999 99999999999999875321 000000
Q ss_pred ccccccCCCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhcCCC
Q 017528 165 HHHIFGHHNSQQIHGHVSSGKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDP 244 (370)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 244 (370)
.+ + +..+...|++++++++++||+|+++.||..++. ++..... ..+.+...+.....+...
T Consensus 147 --~~----------~---~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~~-~~~~~~~---~~~~~~l~~~~~~~~~~~ 207 (295)
T PRK11689 147 --LI----------N---NIASNPLSYGLAFIGAFIWAAYCNVTRKYARGK-NGITLFF---ILTALALWIKYFLSPQPA 207 (295)
T ss_pred --hh----------h---ccccChHHHHHHHHHHHHHHHHHHHHhhccCCC-CchhHHH---HHHHHHHHHHHHHhcCcc
Confidence 00 0 111234699999999999999999999987665 4454322 223333333333322111
Q ss_pred cccccccchhhHHHHHHHHHHHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHH
Q 017528 245 HEWVLGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLY 324 (370)
Q Consensus 245 ~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~ 324 (370)
.. .+...|..+++.+ +.++++|.+|++++++.++++++.+.+++|+++.+++++++||++++.+++|+++|+.|++
T Consensus 208 ~~---~~~~~~~~l~~~~-~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~ 283 (295)
T PRK11689 208 MV---FSLPAIIKLLLAA-AAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSL 283 (295)
T ss_pred cc---CCHHHHHHHHHHH-HHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHH
Confidence 11 2335577777777 4789999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCcc
Q 017528 325 AVLWGKS 331 (370)
Q Consensus 325 l~~~~~~ 331 (370)
+..+.++
T Consensus 284 ~~~~~~~ 290 (295)
T PRK11689 284 LCWLATR 290 (295)
T ss_pred HHhhhHh
Confidence 8865443
No 5
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=100.00 E-value=4e-31 Score=243.13 Aligned_cols=281 Identities=12% Similarity=0.031 Sum_probs=211.3
Q ss_pred cCccccchhHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhhcccC--C-CCCHHHHHHHHH
Q 017528 4 LPLMDKQRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKKA--P-PLSFLTFCKIFF 80 (370)
Q Consensus 4 ~~~~~~~~~~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~--~-~~~~~~~~~~~~ 80 (370)
|||+++.+|++++++++++||..+++.|.. .+ ++|.++.++|+.++.++++++...++++.. + ..+++.+.. ..
T Consensus 1 ~~~~~~~~g~~~~l~a~~~wg~~~~~~k~~-~~-~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 77 (296)
T PRK15430 1 MDAKQTRQGVLLALAAYFIWGIAPAYFKLI-YY-VPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFM-LA 77 (296)
T ss_pred CCchhhhhHHHHHHHHHHHHHHHHHHHHHh-cC-CCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHH-HH
Confidence 455677899999999999999999999975 54 999999999999999888777654322111 0 012333333 34
Q ss_pred HHHHHHHHHHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhccCCcc
Q 017528 81 LSLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQL 160 (370)
Q Consensus 81 ~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~ 160 (370)
.+.++.+.++.++++|++++++++++++.++.|+++.+++++++|||++++ ++.+++++++|+.++..++
T Consensus 78 ~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~------~~~g~~l~~~Gv~li~~~~---- 147 (296)
T PRK15430 78 VSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRM------QWLAVILAICGVLVQLWTF---- 147 (296)
T ss_pred HHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHH------HHHHHHHHHHHHHHHHHHc----
Confidence 666666889999999999999999999999999999999999999999999 9999999999999987431
Q ss_pred ccccccccccCCCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-CchhHHHHHHHHHHHHHHHHHHH
Q 017528 161 RLLCHHHIFGHHNSQQIHGHVSSGKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYP-SKLLFTTLQCFLSSIQSFAIAIA 239 (370)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~ 239 (370)
++. ..+.++++++||.|.+..|+..++.. +....+.+....+.+...+.
T Consensus 148 ----------------------~~~-----~~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 197 (296)
T PRK15430 148 ----------------------GSL-----PIIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAI--- 197 (296)
T ss_pred ----------------------CCc-----cHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHH---
Confidence 111 14678899999999999988654321 11222333443433332211
Q ss_pred hcCCCcccccccchh-hHHHHHHHHHHHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHH
Q 017528 240 LERDPHEWVLGWNVR-LLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLL 318 (370)
Q Consensus 240 ~~~~~~~~~~~~~~~-~~~l~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~l 318 (370)
.+.....+. ..+.. +..+...|+ .+.+++.+|++++++.++++++.+.+++|+++.+++++++||++++.+++|+++
T Consensus 198 ~~~~~~~~~-~~~~~~~~~~~~~g~-~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~l 275 (296)
T PRK15430 198 ADSSTSHMG-QNPMSLNLLLIAAGI-VTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAF 275 (296)
T ss_pred ccCCccccc-CCcHHHHHHHHHHHH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHH
Confidence 111111111 11222 233344454 688999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcC
Q 017528 319 LIGGLYAVLWG 329 (370)
Q Consensus 319 i~~g~~l~~~~ 329 (370)
++.|+.+....
T Consensus 276 I~~~~~v~~~~ 286 (296)
T PRK15430 276 IWVALAIFVMD 286 (296)
T ss_pred HHHHHHHHHHH
Confidence 99888877643
No 6
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=100.00 E-value=2.1e-30 Score=238.02 Aligned_cols=278 Identities=13% Similarity=0.087 Sum_probs=222.3
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHH
Q 017528 7 MDKQRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGI 86 (370)
Q Consensus 7 ~~~~~~~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 86 (370)
.++.+++.+++++++.|+..+.+.|...++ ++|..+.++|++++.++++++... ++ ++.+++++...+..|.+.
T Consensus 8 ~~~~~~~~~~~la~~~~~~~~~~~K~~~~~-~~~~~~~~~R~~~a~l~l~~~~~~--~~--~~~~~~~~~~~~~~g~~~- 81 (293)
T PRK10532 8 LPVWLPILLLLIAMASIQSGASLAKSLFPL-VGAPGVTALRLALGTLILIAIFKP--WR--LRFAKEQRLPLLFYGVSL- 81 (293)
T ss_pred cccchHHHHHHHHHHHHHhhHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHHHhH--Hh--ccCCHHHHHHHHHHHHHH-
Confidence 456889999999999999999999999997 999999999999999888876432 11 123567787888888876
Q ss_pred HHHHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhccCCcccccccc
Q 017528 87 TFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHH 166 (370)
Q Consensus 87 ~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~~~~~~ 166 (370)
...+.++++++++++++.++++..+.|+++.+++. ||. . +..++.++++|+.++...+.+
T Consensus 82 ~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~--~------~~~~~~i~~~Gv~li~~~~~~-------- 141 (293)
T PRK10532 82 GGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFSS----RRP--V------DFVWVVLAVLGLWFLLPLGQD-------- 141 (293)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhc----CCh--H------HHHHHHHHHHHHheeeecCCC--------
Confidence 77788999999999999999999999999998862 332 2 445677889999887632111
Q ss_pred ccccCCCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcc
Q 017528 167 HIFGHHNSQQIHGHVSSGKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDPHE 246 (370)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 246 (370)
.......|++++++++++||.|.+..|+..++.+ +... .+....+.+...+.....+.. ..
T Consensus 142 ----------------~~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~~~-~~~~-~~~~~~~~~~l~~~~~~~~~~-~~ 202 (293)
T PRK10532 142 ----------------VSHVDLTGAALALGAGACWAIYILSGQRAGAEHG-PATV-AIGSLIAALIFVPIGALQAGE-AL 202 (293)
T ss_pred ----------------cccCChHHHHHHHHHHHHHHHHHHHHHHHhccCC-chHH-HHHHHHHHHHHHHHHHHccCc-cc
Confidence 1112346999999999999999999999877754 4555 455566666666665443221 11
Q ss_pred cccccchhhHHHHHHHHHHHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHH
Q 017528 247 WVLGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAV 326 (370)
Q Consensus 247 ~~~~~~~~~~~l~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~ 326 (370)
.+...|..++++|+++++++|.+|++++++.++++++.+.+++|+++.+++++++||+++..+++|++++++|++..
T Consensus 203 ---~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~ 279 (293)
T PRK10532 203 ---WHWSILPLGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGS 279 (293)
T ss_pred ---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHH
Confidence 12234556689999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hcCcch
Q 017528 327 LWGKSK 332 (370)
Q Consensus 327 ~~~~~~ 332 (370)
.+.+++
T Consensus 280 ~~~~~~ 285 (293)
T PRK10532 280 TLTIRR 285 (293)
T ss_pred HhcCCC
Confidence 765433
No 7
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=100.00 E-value=1.3e-30 Score=235.78 Aligned_cols=258 Identities=22% Similarity=0.265 Sum_probs=219.9
Q ss_pred HHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCh
Q 017528 23 YAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGITFSLDLYGIALIYTSA 102 (370)
Q Consensus 23 ~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~ 102 (370)
||.+++..|...+.+.++....+.|.+.+.+++.++... + .+++++.+....|.++..+++.++++|++|+++
T Consensus 1 Wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~--~-----~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~ 73 (260)
T TIGR00950 1 WGTTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRR--R-----PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPV 73 (260)
T ss_pred CcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHh--c-----cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence 899999999988766899999999999998888776543 2 235667778888888889999999999999999
Q ss_pred hhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhccCCccccccccccccCCCCcccccccC
Q 017528 103 TLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHIFGHHNSQQIHGHVS 182 (370)
Q Consensus 103 ~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (370)
++++++.++.|+++.+++++++|||++++ +++|+.++++|++++... +
T Consensus 74 ~~~~ii~~~~P~~~~~~~~l~~~e~~~~~------~~~gi~i~~~Gv~li~~~-~------------------------- 121 (260)
T TIGR00950 74 GEAALLLYLAPLYVTLLSDLMGKERPRKL------VLLAAVLGLAGAVLLLSD-G------------------------- 121 (260)
T ss_pred hhhHHHHhhhHHHHHHHHHHHccCCCcHH------HHHHHHHHHHhHHhhccC-C-------------------------
Confidence 99999999999999999999999999999 999999999999998642 1
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-CchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhhHHHHHH
Q 017528 183 SGKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYP-SKLLFTTLQCFLSSIQSFAIAIALERDPHEWVLGWNVRLLAVAYC 261 (370)
Q Consensus 183 ~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 261 (370)
..+....|+.+++.++++|+.+.+..|+..++.+ ++.....+++..+.+...+.....+.+. .. +...|..+++.
T Consensus 122 ~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~---~~~~~~~~~~~ 197 (260)
T TIGR00950 122 NLSINPAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNP-QA---LSLQWGALLYL 197 (260)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC-Cc---chHHHHHHHHH
Confidence 1123357999999999999999999999887764 2334555678888888887765543321 11 34567778889
Q ss_pred HHHHHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHH
Q 017528 262 GIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGL 323 (370)
Q Consensus 262 g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~ 323 (370)
+++++.+++.+|++++++.++.+++.+.+++|+++.+++++++||++++.+++|+++++.|+
T Consensus 198 ~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 198 GLIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999986
No 8
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=99.97 E-value=8.2e-29 Score=228.74 Aligned_cols=278 Identities=12% Similarity=0.064 Sum_probs=216.3
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017528 17 ILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGITFSLDLYGIA 96 (370)
Q Consensus 17 l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a 96 (370)
++-.++-....+..|.+.++-..|..+++.|+.++.+.+.+... ...+++++.+++++...+..|+++ +.++.+.+++
T Consensus 8 ~~w~~~~~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~ 85 (302)
T TIGR00817 8 GLWYFLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWS-SGLPKRLKISSALLKLLLPVAIVH-TIGHVTSNVS 85 (302)
T ss_pred HHHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 33334444455788998885356999999999998877665521 122334556789999999999997 8889999999
Q ss_pred HhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhccCCccccccccccccCCCCcc
Q 017528 97 LIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHIFGHHNSQQ 176 (370)
Q Consensus 97 l~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~ 176 (370)
++|++++.++++.++.|+++++++++++|||++.+ ++.+++++++|+.+... +
T Consensus 86 l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~------~~~~l~l~~~Gv~l~~~--~------------------- 138 (302)
T TIGR00817 86 LSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPST------LWLSLLPIVGGVALASD--T------------------- 138 (302)
T ss_pred HHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHhhhcC--C-------------------
Confidence 99999999999999999999999999999999999 99999999999987542 1
Q ss_pred cccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhh--cCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcc---ccc--
Q 017528 177 IHGHVSSGKTWIKGCFIMLSSNTSFGLWLVLQGFVMK--SYPSKLLFTTLQCFLSSIQSFAIAIALERDPHE---WVL-- 249 (370)
Q Consensus 177 ~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~---~~~-- 249 (370)
+......|++++++++++|+++.+..||..+ +. ++...+.+++..+.+.++|.....+..... +..
T Consensus 139 ------~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~-~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~ 211 (302)
T TIGR00817 139 ------ELSFNWAGFLSAMISNITFVSRNIFSKKAMTIKSL-DKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAI 211 (302)
T ss_pred ------cccccHHHHHHHHHHHHHHHHHHHHHHHhhccCCC-CcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhh
Confidence 1122346999999999999999999999887 55 568999999999999999988765532110 100
Q ss_pred --ccc-hhhHHHHHHHHHHHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHH
Q 017528 250 --GWN-VRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAV 326 (370)
Q Consensus 250 --~~~-~~~~~l~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~ 326 (370)
... ..+...+..+..+....+.+++.++++.+|++.++..+++|+++.+++++++||+++..+++|+++++.|+.++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~ 291 (302)
T TIGR00817 212 SGVNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLY 291 (302)
T ss_pred cccCchHHHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHH
Confidence 000 11111222232223333345668999999999999999999999999999999999999999999999999999
Q ss_pred hcCc
Q 017528 327 LWGK 330 (370)
Q Consensus 327 ~~~~ 330 (370)
++.|
T Consensus 292 ~~~k 295 (302)
T TIGR00817 292 SRVK 295 (302)
T ss_pred HHHh
Confidence 7644
No 9
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.96 E-value=2.1e-27 Score=216.93 Aligned_cols=274 Identities=15% Similarity=0.164 Sum_probs=203.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhh-cccCCCCCHHHHHHHHHHHHHHHHHHH
Q 017528 12 PYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVE-WKKAPPLSFLTFCKIFFLSLIGITFSL 90 (370)
Q Consensus 12 ~~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~ 90 (370)
..++.++++++|+..++..|...++ -++. .+++.....+.+.++...+. ++.++..+++.+. ....+.++...++
T Consensus 2 ~~~~~~~aa~~~a~~~~~~k~~~~~-~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 77 (281)
T TIGR03340 2 ALTLVVFSALMHAGWNLMAKSHADK-EPDF--LWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWL-LLAISAVANMVYF 77 (281)
T ss_pred cHHHHHHHHHHHHHHHHHHhhcCCc-hhHH--HHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHH-HHHHHHHHHHHHH
Confidence 3577899999999999999976664 4443 46677777777777765432 2233333334344 4444445558999
Q ss_pred HHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhccCCcccccccccccc
Q 017528 91 DLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHIFG 170 (370)
Q Consensus 91 ~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~~~~~~~~~~ 170 (370)
.++++++++.+++.++++.++.|+++.+++++++|||++.+ +++|+.+++.|+.++..++.
T Consensus 78 ~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~------~~~g~~~~~~Gv~ll~~~~~------------- 138 (281)
T TIGR03340 78 LGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPL------AWLGILIITLGLLVLGLSRF------------- 138 (281)
T ss_pred HHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHH------HHHHHHHHHHHHHHHhcccc-------------
Confidence 99999999999999999999999999999999999999999 99999999999998874211
Q ss_pred CCCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHH-HHHHHH---hcCCCcc
Q 017528 171 HHNSQQIHGHVSSGKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQS-FAIAIA---LERDPHE 246 (370)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~---~~~~~~~ 246 (370)
. .....|+.++++++++|++|.+..|+..++.++ ..........+.+.. .+.... .+.. .
T Consensus 139 ------------~-~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 202 (281)
T TIGR03340 139 ------------A-QHRRKAYAWALAAALGTAIYSLSDKAAALGVPA-FYSALGYLGIGFLAMGWPFLLLYLKRHGR--S 202 (281)
T ss_pred ------------c-ccchhHHHHHHHHHHHHHHhhhhccccccchhc-ccccHHHHHHHHHHHHHHHHHHHHHHhcc--c
Confidence 1 112357888999999999999998876544332 221111111222111 222211 1111 1
Q ss_pred cccccchhhHHHHHHHHHHHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHH
Q 017528 247 WVLGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYA 325 (370)
Q Consensus 247 ~~~~~~~~~~~l~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l 325 (370)
.. .....+..+++.+.+.+.++|.+|++++++.++++++...+++|+++.+++++++||+++..+++|++++++|+++
T Consensus 203 ~~-~~~~~~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 203 MF-PYARQILPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred hh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 11 1223455667788888999999999999999999999999999999999999999999999999999999999875
No 10
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.96 E-value=2.4e-26 Score=210.25 Aligned_cols=295 Identities=21% Similarity=0.170 Sum_probs=233.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhCCCC-hHHHHHHHHHHHHHHHHHHHhhhhcc-cCCCCCHHHHHHHHHHHHHHHHH
Q 017528 11 RPYLTVILIQAIYAGMFLLSKAAFNGGMN-NFVFIFYRQAFATLFVAPISLAVEWK-KAPPLSFLTFCKIFFLSLIGITF 88 (370)
Q Consensus 11 ~~~l~~l~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~r~~~~~l~l~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~ 88 (370)
+..++.=..+++-..+.+.+..+.+.|.+ |...+++-++.-.++..++...++++ ++.+.-+++|++.++.+++- ..
T Consensus 13 ~~~~lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~D-v~ 91 (334)
T PF06027_consen 13 IVLLLGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLD-VE 91 (334)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHH-HH
Confidence 34455556667778888888877776666 88888888888888777776664432 22333456788888899998 78
Q ss_pred HHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhccCCcccccccccc
Q 017528 89 SLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHI 168 (370)
Q Consensus 89 ~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~~~~~~~~ 168 (370)
++.+.+.|++|++.+.++++.++..+++++++++++|||+++. +++|+++++.|+.++...|....+.
T Consensus 92 aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~------~~~gv~i~i~Gv~lv~~sD~~~~~~------ 159 (334)
T PF06027_consen 92 ANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWF------HILGVLICIAGVVLVVVSDVLSGSD------ 159 (334)
T ss_pred HHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHH------HHHHHHHHHhhhhheeeeccccccc------
Confidence 8889999999999999999999999999999999999999999 9999999999999888643211000
Q ss_pred ccCCCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhcCC-Cccc
Q 017528 169 FGHHNSQQIHGHVSSGKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERD-PHEW 247 (370)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~ 247 (370)
+ ++..+..+|++++++++++||++++..++..++.+ +.....+..+++.+++.+...+.|.+ ....
T Consensus 160 -----~-------~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~~-~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~ 226 (334)
T PF06027_consen 160 -----S-------SSGSNPILGDLLALLGAILYAVSNVLEEKLVKKAP-RVEFLGMLGLFGFIISGIQLAILERSGIESI 226 (334)
T ss_pred -----C-------CCCCccchhHHHHHHHHHHHHHHHHHHHHhcccCC-HHHHHHHHHHHHHHHHHHHHHheehhhhhcc
Confidence 0 03456689999999999999999999999998874 68888999999999999888777763 2222
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHh
Q 017528 248 VLGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVL 327 (370)
Q Consensus 248 ~~~~~~~~~~l~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~ 327 (370)
+... ..+. ++....++...-|.+....++..+|+..++-..+..+++++++++++|+++++..++|.++|++|.+++.
T Consensus 227 ~w~~-~~~~-~~v~~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~ 304 (334)
T PF06027_consen 227 HWTS-QVIG-LLVGYALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYN 304 (334)
T ss_pred CCCh-hhHH-HHHHHHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEE
Confidence 2211 2222 2222333566777788889999999999999999999999999999999999999999999999999998
Q ss_pred cCcchh
Q 017528 328 WGKSKE 333 (370)
Q Consensus 328 ~~~~~~ 333 (370)
..+++.
T Consensus 305 ~~~~~~ 310 (334)
T PF06027_consen 305 LAESPE 310 (334)
T ss_pred ccCCcc
Confidence 765543
No 11
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=99.95 E-value=3.9e-26 Score=214.10 Aligned_cols=282 Identities=17% Similarity=0.142 Sum_probs=219.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhCCCC-hHHHHHHHHHHHHHHHHHHHhhhhcccCCCC--CHHHHHHHHHHHHHHHH
Q 017528 11 RPYLTVILIQAIYAGMFLLSKAAFNGGMN-NFVFIFYRQAFATLFVAPISLAVEWKKAPPL--SFLTFCKIFFLSLIGIT 87 (370)
Q Consensus 11 ~~~l~~l~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~~~ 87 (370)
+..++.+.--.+-.......|.+++. ++ |..++.+|++++.++....+.. ..++.++. .++.+...+..|+++..
T Consensus 49 ~~~~~~~~wy~~s~~~~~~nK~vl~~-~~~P~~l~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~llp~gl~~~~ 126 (350)
T PTZ00343 49 KLALLFLTWYALNVLYVVDNKLALNM-LPLPWTISSLQLFVGWLFALLYWAT-GFRKIPRIKSLKLFLKNFLPQGLCHLF 126 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-CChhHHHHHHHHHHHHHHHHHHHHh-CCCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 33444444444555667889999997 99 9999999999998876554332 22222333 24577888999999844
Q ss_pred HHHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhccCCccccccccc
Q 017528 88 FSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHH 167 (370)
Q Consensus 88 ~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~~~~~~~ 167 (370)
.+...+.|+++++++.++++.++.|+++++++++++|||++++ ++.++++++.|+.+....
T Consensus 127 -~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~------~~l~l~l~v~Gv~l~~~~------------ 187 (350)
T PTZ00343 127 -VHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLY------AYLSLIPIVGGVALASVK------------ 187 (350)
T ss_pred -HHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHH------HHHHHHHHHHHHHheecc------------
Confidence 4556779999999999999999999999999999999999999 999999999999998742
Q ss_pred cccCCCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCC------CchhHHHHHHHHHHHHHHHHHHHhc
Q 017528 168 IFGHHNSQQIHGHVSSGKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYP------SKLLFTTLQCFLSSIQSFAIAIALE 241 (370)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~------~~~~~~~~~~~~~~i~~~~~~~~~~ 241 (370)
+......|++++++++++++++++..|+..++.+ ++.+...++...+.++++|+....|
T Consensus 188 ---------------~~~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e 252 (350)
T PTZ00343 188 ---------------ELHFTWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFE 252 (350)
T ss_pred ---------------cchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1122357999999999999999999999887542 3445666668889999999887655
Q ss_pred CCC--cccc----cccchhhHHHHHHHHHHHHHHHHHHHH----HHhccCceeEEeccchHHHHHHHHHHHHhcccchhh
Q 017528 242 RDP--HEWV----LGWNVRLLAVAYCGIIVTALTYYLQAW----VIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLG 311 (370)
Q Consensus 242 ~~~--~~~~----~~~~~~~~~l~~~g~~~~~~~~~~~~~----a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~ 311 (370)
... ..+. ......+..+++ .++.+++++++++. ++++++|.+.++..+++|+++++++++++||++++.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~l~-~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~ 331 (350)
T PTZ00343 253 GKKWVPVWTNYTANMTNYTKGIIIF-KIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLL 331 (350)
T ss_pred hHHHHHHHHHhhhcccccchHHHHH-HHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchH
Confidence 321 1110 001112233444 45567899999985 999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhcC
Q 017528 312 RILGGLLLIGGLYAVLWG 329 (370)
Q Consensus 312 ~~iG~~li~~g~~l~~~~ 329 (370)
+++|+++++.|+++++..
T Consensus 332 ~~iG~~lii~Gv~lYs~~ 349 (350)
T PTZ00343 332 GYLGMAVAILGALLYSLF 349 (350)
T ss_pred hHHHHHHHHHHHHHHhhc
Confidence 999999999999998764
No 12
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.95 E-value=1.7e-25 Score=201.81 Aligned_cols=248 Identities=11% Similarity=0.049 Sum_probs=184.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhhcc-----cCCCCCHHH-HHHHHHHHHH
Q 017528 11 RPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWK-----KAPPLSFLT-FCKIFFLSLI 84 (370)
Q Consensus 11 ~~~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~-----~~~~~~~~~-~~~~~~~g~~ 84 (370)
+|++++++++++||.++++.|. .++ ++|.++.++|++++.+++.++...++++ +.++.++++ +......|++
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~-~~~-~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 79 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKL-LKP-LPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL 79 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHH-hcc-CCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence 5889999999999999999998 454 9999999999999998887765443221 111112222 4445667766
Q ss_pred HHHHHHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhccCCcccccc
Q 017528 85 GITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLC 164 (370)
Q Consensus 85 ~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~~~~ 164 (370)
. +.++.++++|++++++++++++.++.|+++++++++++|||++++ ++++++++++|++++..++
T Consensus 80 ~-~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~------~~l~~~~~~~Gv~li~~~~-------- 144 (256)
T TIGR00688 80 I-GFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRF------QFIAVIIATLGVISNIVLK-------- 144 (256)
T ss_pred H-HHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHH------HHHHHHHHHHHHHHHHHHc--------
Confidence 5 899999999999999999999999999999999999999999999 9999999999999876421
Q ss_pred ccccccCCCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhcCCC
Q 017528 165 HHHIFGHHNSQQIHGHVSSGKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDP 244 (370)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 244 (370)
.+. ..++++++++|+.|.+..|+..++ +. ...... .........+.....+...
T Consensus 145 ------------------~~~-----~~~~l~aa~~~a~~~i~~~~~~~~-~~-~~~~~~-~~~~~~~~~~~~~~~~~~~ 198 (256)
T TIGR00688 145 ------------------GSL-----PWEALVLAFSFTAYGLIRKALKNT-DL-AGFCLE-TLSLMPVAIYYLLQTDFAT 198 (256)
T ss_pred ------------------CCc-----hHHHHHHHHHHHHHHHHHhhcCCC-Cc-chHHHH-HHHHHHHHHHHHHHhccCc
Confidence 111 135788999999999999987543 22 222211 1122222222111111111
Q ss_pred cccccccchhhHHHHHHHHHHHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHH
Q 017528 245 HEWVLGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFL 303 (370)
Q Consensus 245 ~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~ 303 (370)
....+....|..+++.|++ +.++|.++++++++.++++++...+++|+++.+++.++
T Consensus 199 -~~~~~~~~~~~~l~~~g~~-t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 199 -VQQTNPFPIWLLLVLAGLI-TGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred -ccccCchhHHHHHHHHHHH-HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence 1111122367888888876 88999999999999999999999999999999999764
No 13
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.93 E-value=5e-23 Score=188.79 Aligned_cols=283 Identities=23% Similarity=0.309 Sum_probs=218.1
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHH
Q 017528 8 DKQRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGIT 87 (370)
Q Consensus 8 ~~~~~~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 87 (370)
+...+....++.++.|+......|...++..++....+.|...+.+...+.... ++...++. .+.+.+..+.+.++..
T Consensus 4 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~ 81 (292)
T COG0697 4 ALLLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLL-EPRGLRPA-LRPWLLLLLLALLGLA 81 (292)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHh-hccccccc-ccchHHHHHHHHHHHH
Confidence 345678888999999999999999887743566666677999888884433322 11111111 1224556677777779
Q ss_pred HHHHHHHHHHhhcChhhHhhhccchhHHHHHHHH-HHhhccccccccCccchhhhHHHHHhhhhhhhhccCCcccccccc
Q 017528 88 FSLDLYGIALIYTSATLAAATTNCLPAITFFLAV-LLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHH 166 (370)
Q Consensus 88 ~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~-l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~~~~~~ 166 (370)
..+.+++.++++++++.++++.++.|+++.++++ +++|||++++ ++.++.+++.|++++..++...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~------~~~~~~~~~~Gv~lv~~~~~~~------- 148 (292)
T COG0697 82 LPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLL------QILGILLALAGVLLILLGGGGG------- 148 (292)
T ss_pred HHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHH------HHHHHHHHHHhHHheecCCCcc-------
Confidence 9999999999999999999999999999999997 6679999999 9999999999999998643210
Q ss_pred ccccCCCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHH-HHHHHHHHHHHHHHHHhcCCCc
Q 017528 167 HIFGHHNSQQIHGHVSSGKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTT-LQCFLSSIQSFAIAIALERDPH 245 (370)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~ 245 (370)
... ...|+.+.+.++++++++.+..|+.. +. ++..... +..........+. ......
T Consensus 149 ----------------~~~-~~~g~~~~l~a~~~~a~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~- 206 (292)
T COG0697 149 ----------------GIL-SLLGLLLALAAALLWALYTALVKRLS-RL-GPVTLALLLQLLLALLLLLLF--FLSGFG- 206 (292)
T ss_pred ----------------hhH-HHHHHHHHHHHHHHHHHHHHHHHHhc-CC-ChHHHHHHHHHHHHHHHHHHH--Hhcccc-
Confidence 011 46899999999999999999999887 43 3345554 3433222222221 111111
Q ss_pred ccccccchhhHHHHHHHHHHHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHH
Q 017528 246 EWVLGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYA 325 (370)
Q Consensus 246 ~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l 325 (370)
.......+..+.+.|++.+++++.++++++++.++..++.+.+++|+++.++++++++|+++..+++|+++++.|+.+
T Consensus 207 --~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l 284 (292)
T COG0697 207 --APILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLL 284 (292)
T ss_pred --ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHH
Confidence 122345688889999998989999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcC
Q 017528 326 VLWG 329 (370)
Q Consensus 326 ~~~~ 329 (370)
...+
T Consensus 285 ~~~~ 288 (292)
T COG0697 285 ASLR 288 (292)
T ss_pred Hhcc
Confidence 8654
No 14
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=99.92 E-value=1.3e-22 Score=176.85 Aligned_cols=282 Identities=15% Similarity=0.098 Sum_probs=227.5
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhhcccC-C--CCCHHHHHHHHHHHHH
Q 017528 8 DKQRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKKA-P--PLSFLTFCKIFFLSLI 84 (370)
Q Consensus 8 ~~~~~~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~-~--~~~~~~~~~~~~~g~~ 84 (370)
+..+|+++.+.+.++||..+...|.+ ++ .++.++...|.+-+.++++.+....++++. . ..+++.+....+.+++
T Consensus 4 ~~~~Gil~~l~Ay~lwG~lp~y~kll-~~-~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~l 81 (293)
T COG2962 4 DSRKGILLALLAYLLWGLLPLYFKLL-EP-LPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALL 81 (293)
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHH-cc-CCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHH
Confidence 45689999999999999999999965 54 999999999999999888776655333221 1 1245667767777766
Q ss_pred HHHHHHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhccCCcccccc
Q 017528 85 GITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLC 164 (370)
Q Consensus 85 ~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~~~~ 164 (370)
. ..++..|.+|.+....-+++.-++..|++.++++.+++|||+++. |++++.++.+||.......|
T Consensus 82 i-~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~------Q~iAV~lA~~GV~~~~~~~g------- 147 (293)
T COG2962 82 I-GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRL------QWIAVGLAAAGVLIQTWLLG------- 147 (293)
T ss_pred H-HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHH------HHHHHHHHHHHHHHHHHHcC-------
Confidence 6 899999999999999999999999999999999999999999999 99999999999999887422
Q ss_pred ccccccCCCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhcCCC
Q 017528 165 HHHIFGHHNSQQIHGHVSSGKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDP 244 (370)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 244 (370)
+-+ ..++.-++.|+.|...-|+..- ++.+-....+..-.+..+...++.+...
T Consensus 148 -------------------~lp-----wval~la~sf~~Ygl~RK~~~v---~a~~g~~lE~l~l~p~al~yl~~l~~~~ 200 (293)
T COG2962 148 -------------------SLP-----WVALALALSFGLYGLLRKKLKV---DALTGLTLETLLLLPVALIYLLFLADSG 200 (293)
T ss_pred -------------------CCc-----HHHHHHHHHHHHHHHHHHhcCC---chHHhHHHHHHHHhHHHHHHHHHHhcCc
Confidence 111 2445568899999988665432 3466666677776776666666655543
Q ss_pred cccccccchhhHHHHHHHHHHHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHH
Q 017528 245 HEWVLGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLY 324 (370)
Q Consensus 245 ~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~ 324 (370)
+.....+...+..++..|. .|+++..++..+.++++-+..+.++|.+|..-.+++++++||+++..+++..+.|-+|++
T Consensus 201 ~~~~~~~~~~~~LLv~aG~-vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~ 279 (293)
T COG2962 201 QFLQQNANSLWLLLVLAGL-VTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALA 279 (293)
T ss_pred hhhhcCCchHHHHHHHhhH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHH
Confidence 3122234556777777776 599999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCcchh
Q 017528 325 AVLWGKSKE 333 (370)
Q Consensus 325 l~~~~~~~~ 333 (370)
++.++.-++
T Consensus 280 l~~~d~l~~ 288 (293)
T COG2962 280 LFSIDGLYT 288 (293)
T ss_pred HHHHHHHHH
Confidence 998765443
No 15
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=99.91 E-value=1.9e-22 Score=171.09 Aligned_cols=274 Identities=15% Similarity=0.097 Sum_probs=228.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 017528 12 PYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGITFSLD 91 (370)
Q Consensus 12 ~~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 91 (370)
+++.++.+....-....+.|.++.. .++...+.+|..++.++++++..- .+.+.+++++......|+.. +..|.
T Consensus 13 p~~~ll~amvsiq~Gas~Ak~LFP~-vG~~g~t~lRl~~aaLIll~l~RP----wr~r~~~~~~~~~~~yGvsL-g~MNl 86 (292)
T COG5006 13 PILALLVAMVSIQSGASFAKSLFPL-VGAAGVTALRLAIAALILLALFRP----WRRRLSKPQRLALLAYGVSL-GGMNL 86 (292)
T ss_pred cHHHHHHHHHHHHhhHHHHHHHccc-cChhhHHHHHHHHHHHHHHHHhhH----HHhccChhhhHHHHHHHHHH-HHHHH
Confidence 5888888888888888999999998 999999999999999999887532 23456788999999999887 88999
Q ss_pred HHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhccCCccccccccccccC
Q 017528 92 LYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHIFGH 171 (370)
Q Consensus 92 ~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~~~~~~~~~~~ 171 (370)
+||.+++..|.+.+..+.++.|+..++++- + +.+ +.+.+.+++.|+.++.- .+..
T Consensus 87 ~FY~si~riPlGiAVAiEF~GPL~vA~~~s----R--r~~------d~vwvaLAvlGi~lL~p-~~~~------------ 141 (292)
T COG5006 87 LFYLSIERIPLGIAVAIEFTGPLAVALLSS----R--RLR------DFVWVALAVLGIWLLLP-LGQS------------ 141 (292)
T ss_pred HHHHHHHhccchhhhhhhhccHHHHHHHhc----c--chh------hHHHHHHHHHHHHhhee-ccCC------------
Confidence 999999999999999999999999988853 1 124 77888889999888763 2211
Q ss_pred CCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhcCCCccccccc
Q 017528 172 HNSQQIHGHVSSGKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDPHEWVLGW 251 (370)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 251 (370)
....+..|..+++.++.||++|++..+|..+.. +...-+...+..+.++.+|+...... . ....
T Consensus 142 -----------~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~-~g~~g~a~gm~vAaviv~Pig~~~ag-~---~l~~ 205 (292)
T COG5006 142 -----------VWSLDPVGVALALGAGACWALYIVLGQRAGRAE-HGTAGVAVGMLVAALIVLPIGAAQAG-P---ALFS 205 (292)
T ss_pred -----------cCcCCHHHHHHHHHHhHHHHHHHHHcchhcccC-CCchHHHHHHHHHHHHHhhhhhhhcc-h---hhcC
Confidence 233446899999999999999999999988644 34678888999999999998854222 1 1223
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHhcCcc
Q 017528 252 NVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVLWGKS 331 (370)
Q Consensus 252 ~~~~~~l~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~~ 331 (370)
+.-...-+.+|++++.+.|.+-..++++.++...+.+.++||.++.+.+++++||.+|..||+|+++++.+..-.++..+
T Consensus 206 p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~~ 285 (292)
T COG5006 206 PSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTAR 285 (292)
T ss_pred hHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccccccC
Confidence 44566678889999999999999999999999999999999999999999999999999999999999999887766444
Q ss_pred h
Q 017528 332 K 332 (370)
Q Consensus 332 ~ 332 (370)
|
T Consensus 286 ~ 286 (292)
T COG5006 286 K 286 (292)
T ss_pred C
Confidence 3
No 16
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.90 E-value=2e-21 Score=177.77 Aligned_cols=274 Identities=13% Similarity=0.086 Sum_probs=208.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 017528 12 PYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGITFSLD 91 (370)
Q Consensus 12 ~~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 91 (370)
++++.++++++||+..+..|... |.++.+.. |..++.+++..+....+ .++ ...++.+...++.|++. ..++.
T Consensus 2 ~~l~~lia~~~wGs~g~~~k~~~--g~~~~~~~--~~~~g~l~~~~~~~~~~-~~~-~~~~~~~~~g~l~G~~w-~ig~~ 74 (290)
T TIGR00776 2 DILIALIPALFWGSFVLINVKIG--GGPYSQTL--GTTFGALILSIAIAIFV-LPE-FWALSIFLVGLLSGAFW-ALGQI 74 (290)
T ss_pred chHHHHHHHHHHhhhHHHHhccC--CCHHHHHH--HHHHHHHHHHHHHHHHh-CCc-ccccHHHHHHHHHHHHH-Hhhhh
Confidence 57889999999999999999765 47887765 77777777766554422 212 12355566677777776 88999
Q ss_pred HHHHHHhhcChhhHhhhcc-chhHHHHHHHHHHhhccccccccCccch----hhhHHHHHhhhhhhhhccCCcccccccc
Q 017528 92 LYGIALIYTSATLAAATTN-CLPAITFFLAVLLRMEVLKLKTVPGVAK----LVGILICIGGAATLAFYNGPQLRLLCHH 166 (370)
Q Consensus 92 ~~~~al~~~~~~~~~~i~~-~~pi~~~ll~~l~~~e~~~~~~~~~~~~----~~~i~l~~~Gv~li~~~~~~~~~~~~~~ 166 (370)
+|+.++++++.+.+..+.+ +.+++..+.+.+++|||.+.+ + ++|++++++|++++...++++.+.
T Consensus 75 ~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~------~~~~~~~g~~l~l~G~~l~~~~~~~~~~~---- 144 (290)
T TIGR00776 75 NQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSI------QTLLGLLALILIIIGVYLTSRSKDKSAGI---- 144 (290)
T ss_pred hHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchH------HHHHHHHHHHHHHHhHheEEecccccccc----
Confidence 9999999999999999997 899999999999999999998 8 999999999998876432111000
Q ss_pred ccccCCCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHH---HHHHHHHHHHHHhcCC
Q 017528 167 HIFGHHNSQQIHGHVSSGKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCF---LSSIQSFAIAIALERD 243 (370)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~---~~~i~~~~~~~~~~~~ 243 (370)
+ +..+..+|.+++++++++|+.|.+..|+.. + +|...++.+.. .+.++..+.. . .+
T Consensus 145 -------------~--~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~~--~-~~~~~~~~~~~g~~~~~~~~~~~~--~-~~ 203 (290)
T TIGR00776 145 -------------K--SEFNFKKGILLLLMSTIGYLVYVVVAKAFG--V-DGLSVLLPQAIGMVIGGIIFNLGH--I-LA 203 (290)
T ss_pred -------------c--cccchhhHHHHHHHHHHHHHHHHHHHHHcC--C-CcceehhHHHHHHHHHHHHHHHHH--h-cc
Confidence 0 002346799999999999999999999762 4 45777444444 3333332222 1 11
Q ss_pred CcccccccchhhHHHHHHHHHHHHHHHHHHHHHHh-ccCceeEEeccchHHHHHHHHHHHHhcccchhhhH----HHHHH
Q 017528 244 PHEWVLGWNVRLLAVAYCGIIVTALTYYLQAWVIE-KKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRI----LGGLL 318 (370)
Q Consensus 244 ~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~a~~-~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~----iG~~l 318 (370)
+++ .+...+. .+..|++ ..+++.+|..+.+ +.+++..+.+...+|+.+.+++++++||+.++.++ +|+++
T Consensus 204 -~~~--~~~~~~~-~~~~Gi~-~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~l 278 (290)
T TIGR00776 204 -KPL--KKYAILL-NILPGLM-WGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIIL 278 (290)
T ss_pred -cch--HHHHHHH-HHHHHHH-HHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHH
Confidence 111 1222333 3447887 7999999999999 99999999999999999999999999999999999 99999
Q ss_pred HHHHHHHHhc
Q 017528 319 LIGGLYAVLW 328 (370)
Q Consensus 319 i~~g~~l~~~ 328 (370)
++.|+.+...
T Consensus 279 Ii~~~~l~~~ 288 (290)
T TIGR00776 279 IIIAANILGI 288 (290)
T ss_pred HHHHHHHHhc
Confidence 9999998754
No 17
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=99.88 E-value=1.9e-23 Score=178.18 Aligned_cols=288 Identities=13% Similarity=0.063 Sum_probs=214.9
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHH
Q 017528 10 QRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGITFS 89 (370)
Q Consensus 10 ~~~~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 89 (370)
.+|.++..++ ..+.+..++.+...+ .+|....-.|+++-.+...+..++.....+- +.....++++.|+.| ..+
T Consensus 37 ~~gl~l~~vs-~ff~~~~vv~t~~~e--~~p~e~a~~r~l~~mlit~pcliy~~~~v~g--p~g~R~~LiLRg~mG-~tg 110 (346)
T KOG4510|consen 37 NLGLLLLTVS-YFFNSCMVVSTKVLE--NDPMELASFRLLVRMLITYPCLIYYMQPVIG--PEGKRKWLILRGFMG-FTG 110 (346)
T ss_pred ccCceehhhH-HHHhhHHHhhhhhhc--cChhHhhhhhhhhehhhhheEEEEEeeeeec--CCCcEEEEEeehhhh-hhH
Confidence 4566777777 444444444444444 7899999999888888877776653333211 223344567788888 556
Q ss_pred HHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhccCCcccccc-cccc
Q 017528 90 LDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLC-HHHI 168 (370)
Q Consensus 90 ~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~~~~-~~~~ 168 (370)
....|||++|.+.+++.++....|+++.+++|+++||++++. +.++..+.+.||+++..+. -..+++. ++++
T Consensus 111 vmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~------eaL~s~itl~GVVLIvRPp-FlFG~~t~g~~~ 183 (346)
T KOG4510|consen 111 VMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKF------EALGSLITLLGVVLIVRPP-FLFGDTTEGEDS 183 (346)
T ss_pred HHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHH------HHHHHHHhhheEEEEecCC-cccCCCcccccc
Confidence 667788999999999999999999999999999999999999 9999999999999998642 1111110 0110
Q ss_pred ccCCCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccc
Q 017528 169 FGHHNSQQIHGHVSSGKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDPHEWV 248 (370)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 248 (370)
. .....+.|...++.++++-|-..++.|+..|+.+. .....+....+.+.+++.....+. .++
T Consensus 184 s-------------~~~~~~~gt~aai~s~lf~asvyIilR~iGk~~h~-~msvsyf~~i~lV~s~I~~~~ig~--~~l- 246 (346)
T KOG4510|consen 184 S-------------QVEYDIPGTVAAISSVLFGASVYIILRYIGKNAHA-IMSVSYFSLITLVVSLIGCASIGA--VQL- 246 (346)
T ss_pred c-------------cccccCCchHHHHHhHhhhhhHHHHHHHhhccccE-EEEehHHHHHHHHHHHHHHhhccc--eec-
Confidence 0 11334567888888888888888888888787653 555666666666666654433331 112
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHhc
Q 017528 249 LGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVLW 328 (370)
Q Consensus 249 ~~~~~~~~~l~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~ 328 (370)
.....+|+.++.+|++ +.+++.+...++++..+..++++.+.+.++++++.+++||+.|+++.+.|+++++.+.++...
T Consensus 247 P~cgkdr~l~~~lGvf-gfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~ 325 (346)
T KOG4510|consen 247 PHCGKDRWLFVNLGVF-GFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVAL 325 (346)
T ss_pred CccccceEEEEEehhh-hhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHH
Confidence 1245677778888885 779999999999999999999999999999999999999999999999999999999888754
No 18
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.84 E-value=2.5e-18 Score=158.66 Aligned_cols=278 Identities=17% Similarity=0.171 Sum_probs=213.6
Q ss_pred HHHHHHHhC-CCC--hHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhh
Q 017528 28 LLSKAAFNG-GMN--NFVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGITFSLDLYGIALIYTSATL 104 (370)
Q Consensus 28 ~~~k~~~~~-~~~--~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~ 104 (370)
+......+. ... |..+++.++.+..++..+.....+++ +.++..+...+..+++. .++..+-+.|++|++...
T Consensus 17 ~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-~~~~~~~~~al~~i~~p~ 92 (303)
T PF08449_consen 17 ILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFP---KSRKIPLKKYAILSFLF-FLASVLSNAALKYISYPT 92 (303)
T ss_pred HHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcccc---CCCcChHHHHHHHHHHH-HHHHHHHHHHHHhCChHH
Confidence 444444433 233 88999999999888777765543312 22334455666677666 778888899999999999
Q ss_pred HhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhccCCccccccccccccCCCCcccccccCCC
Q 017528 105 AAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHIFGHHNSQQIHGHVSSG 184 (370)
Q Consensus 105 ~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (370)
..++.++.|+.+++++.+++|+|.+.+ ++.++++..+|+++....+....+. ++ . ..
T Consensus 93 ~~~~ks~~~i~vmi~~~l~~~k~y~~~------~~~~v~li~~Gv~~~~~~~~~~~~~-----------~~-----~-~~ 149 (303)
T PF08449_consen 93 QIVFKSSKPIPVMILGVLILGKRYSRR------QYLSVLLITIGVAIFTLSDSSSSSS-----------SN-----S-SS 149 (303)
T ss_pred HHHHhhhHHHHHHHHHHHhcCccccHH------HHHHHHHHHhhHheeeecccccccc-----------cc-----c-cc
Confidence 999999999999999999999999999 9999999999999988643221110 00 0 22
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-CchhHHHHHHHHHHHHHHHHHHH--hcCCCc--ccccccchhhHHHH
Q 017528 185 KTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYP-SKLLFTTLQCFLSSIQSFAIAIA--LERDPH--EWVLGWNVRLLAVA 259 (370)
Q Consensus 185 ~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~--~~~~~~~~~~~~l~ 259 (370)
.++..|+++.+++.++.+...+.+++..++++ ++.+.+++...++.+..++.... .+...+ ++....+..+..++
T Consensus 150 ~~~~~G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~ 229 (303)
T PF08449_consen 150 FSSALGIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLL 229 (303)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHH
Confidence 22334999999999999999999999987766 66899999999999988887766 222111 11122333344444
Q ss_pred HHHHHHHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHhcCcchh
Q 017528 260 YCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVLWGKSKE 333 (370)
Q Consensus 260 ~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~~~~ 333 (370)
... +++.++..+.+...++.++...+.+..++.+++++++++++|+++++.+|+|.++++.|..++.+.++|+
T Consensus 230 ~~s-~~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~ 302 (303)
T PF08449_consen 230 LFS-LTGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKK 302 (303)
T ss_pred HHH-HHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccC
Confidence 444 4677888888899999999999999999999999999999999999999999999999999998766554
No 19
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=99.80 E-value=1.4e-18 Score=155.69 Aligned_cols=296 Identities=17% Similarity=0.213 Sum_probs=225.7
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHhCCC--ChHHHHHHHHHHHHHHHHHHH----hh-----h---------------
Q 017528 9 KQRPYLTVILIQAIYAGMFLLSKAAFNGGM--NNFVFIFYRQAFATLFVAPIS----LA-----V--------------- 62 (370)
Q Consensus 9 ~~~~~l~~l~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~r~~~~~l~l~~~~----~~-----~--------------- 62 (370)
...|+.++++..++|-.+.-+.+...+++- .|+..++...-.-.+.+.++. .+ |
T Consensus 12 ~~lGl~lL~~V~viWV~SSeLT~~if~~~~f~kPFfiTY~~ts~fivYL~~~~~~d~~~~~~~~R~~~~~~~~~~e~d~e 91 (416)
T KOG2765|consen 12 WTLGLVLLLLVVVIWVASSELTQSIFEDYNFRKPFFITYLKTSLFIVYLPPFILIDAPWRILETRSKRSNHAIMEEADAE 91 (416)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHhhcccCCceeEeeecccceehhhhhhhhhcchhhhhhhhccccchhhhhhhhhh
Confidence 457999999999999999999999988622 377766655443333333322 00 0
Q ss_pred -----------------------------hc--------------ccCCCCCH------------HHHHHHHHHHHHHHH
Q 017528 63 -----------------------------EW--------------KKAPPLSF------------LTFCKIFFLSLIGIT 87 (370)
Q Consensus 63 -----------------------------~~--------------~~~~~~~~------------~~~~~~~~~g~~~~~ 87 (370)
.. .+.+...+ +.....+....+. .
T Consensus 92 ~y~~~~~~~~~~~~~l~~~~~~~~~~~~l~s~~~~~~~s~~~e~~~~~~~~~rs~l~~~~~~t~~~~ak~sl~fc~lW-F 170 (416)
T KOG2765|consen 92 GYFSACTTDKTMESGLSGPESVPDKSPLLGSGEEEKPESTNLEVREKANTKKRSNLKERGKLTATQTAKLSLFFCPLW-F 170 (416)
T ss_pred ccccccccccccccccCCceeeeccccccccccccCCCCccccccccCCcccccchhhhhhhHHHHHHHHHHHHHHHH-H
Confidence 00 00000011 2334445666676 7
Q ss_pred HHHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhccCCccccccccc
Q 017528 88 FSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHH 167 (370)
Q Consensus 88 ~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~~~~~~~ 167 (370)
+.++.++.|+.+++++...++.+++-+|+..++.++..||++.. |++++++++.|++++...+..+.++
T Consensus 171 ~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~s------Kllav~~si~GViiVt~~~s~~~~~----- 239 (416)
T KOG2765|consen 171 LANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLS------KLLAVFVSIAGVIIVTMGDSKQNSD----- 239 (416)
T ss_pred HHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHH------HHHHHHHhhccEEEEEecccccccc-----
Confidence 88889999999999999999999999999999999999999999 9999999999999998753322110
Q ss_pred cccCCCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCch---hHHHHHHHHHHHHHHHHHHHhcC-C
Q 017528 168 IFGHHNSQQIHGHVSSGKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKL---LFTTLQCFLSSIQSFAIAIALER-D 243 (370)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~-~ 243 (370)
. .+.....|+++++++++.||+|.++.||...+.+... ....+..++..+++.|..++.+. .
T Consensus 240 --------~------~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~ 305 (416)
T KOG2765|consen 240 --------L------PASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFG 305 (416)
T ss_pred --------C------CccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhc
Confidence 0 4455679999999999999999999999887764223 23334444555666665555433 2
Q ss_pred CcccccccchhhHHHHHHHHHHHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHH
Q 017528 244 PHEWVLGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGL 323 (370)
Q Consensus 244 ~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~ 323 (370)
.+.+..+...+...+++.++++++++-++|.+|.-.++|..+++-..++...+++.+.++-|.++++.+++|...|++|.
T Consensus 306 ~e~F~lP~~~q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~F 385 (416)
T KOG2765|consen 306 EERFELPSSTQFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGF 385 (416)
T ss_pred cCcccCCCCceeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHH
Confidence 33455566667778888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCc
Q 017528 324 YAVLWGK 330 (370)
Q Consensus 324 ~l~~~~~ 330 (370)
+..+...
T Consensus 386 v~vn~~~ 392 (416)
T KOG2765|consen 386 VIVNISS 392 (416)
T ss_pred hheeccc
Confidence 9987643
No 20
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=99.76 E-value=2.8e-18 Score=155.24 Aligned_cols=273 Identities=17% Similarity=0.172 Sum_probs=217.9
Q ss_pred HHHHHHHHHhC-CC-ChHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChh
Q 017528 26 MFLLSKAAFNG-GM-NNFVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGITFSLDLYGIALIYTSAT 103 (370)
Q Consensus 26 ~~~~~k~~~~~-~~-~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~ 103 (370)
.....|..++. |+ -|..++.++.+.+.+........+..+..+..++..+...+.+|++. +++..+-+.|+.|.+++
T Consensus 32 ~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~-~~~~v~~n~Sl~~v~Vs 110 (316)
T KOG1441|consen 32 VIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVF-CISHVLGNVSLSYVPVS 110 (316)
T ss_pred eEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHH-HHHHHhcchhhhccchh
Confidence 34567888773 23 38899999888888887777665444333333456688888888887 88899999999999999
Q ss_pred hHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhccCCccccccccccccCCCCcccccccCC
Q 017528 104 LAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHIFGHHNSQQIHGHVSS 183 (370)
Q Consensus 104 ~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (370)
.++.+..+.|++++++++++.+|+.+.. .+..+.....|+.+.+.. +
T Consensus 111 F~q~iKa~~P~~tvl~~~~~~~~~~s~~------~~lsL~piv~GV~ias~~---------------------------e 157 (316)
T KOG1441|consen 111 FYQTIKALMPPFTVLLSVLLLGKTYSSM------TYLSLLPIVFGVAIASVT---------------------------E 157 (316)
T ss_pred HHHHHHhhcchhHHHHHHHHhCCCCcce------EEEEEEEeeeeEEEeeec---------------------------c
Confidence 9999999999999999999999999999 999999999999998752 3
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHhh--cCC-CchhHHHHHHHHHHHHHH-HHHHHhcCCCc---ccccccchhhH
Q 017528 184 GKTWIKGCFIMLSSNTSFGLWLVLQGFVMK--SYP-SKLLFTTLQCFLSSIQSF-AIAIALERDPH---EWVLGWNVRLL 256 (370)
Q Consensus 184 ~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~--~~~-~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~---~~~~~~~~~~~ 256 (370)
.+-...|...++.+.+..+..+++.++..+ +.+ |+.+...++...+.+.++ |.....+++.. ... .......
T Consensus 158 ~~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~-~~~~~~~ 236 (316)
T KOG1441|consen 158 LSFNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTA-PWFVTFL 236 (316)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeecc-ccchhhH
Confidence 334568999999999999999999999884 333 779999999999999999 87766666433 110 1112233
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHhcCcchhh
Q 017528 257 AVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVLWGKSKEQ 334 (370)
Q Consensus 257 ~l~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~~~~~ 334 (370)
...+..+ +........+..+.+++|.+.++.+...-++.++.++++|+++.++.+..|.++.++|+++|++.|.+++
T Consensus 237 ~~~~~sv-~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~~ 313 (316)
T KOG1441|consen 237 ILLLNSV-LAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKEK 313 (316)
T ss_pred HHHHHHH-HHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhhh
Confidence 3444443 3444455667889999999999999999999999999999999999999999999999999988766543
No 21
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.72 E-value=7.1e-17 Score=123.05 Aligned_cols=135 Identities=18% Similarity=0.186 Sum_probs=123.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhhcccCC-CCCHHHHHHHHHHHHHHHHHH
Q 017528 11 RPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKKAP-PLSFLTFCKIFFLSLIGITFS 89 (370)
Q Consensus 11 ~~~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~ 89 (370)
...+++++++++||...++.|...++ +||...++.|..+...++..+....++.... ..++|.|....+.|+.+ +++
T Consensus 3 ~~~~~ALLsA~fa~L~~iF~KIGl~~-vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~-gls 80 (140)
T COG2510 3 AAIIYALLSALFAGLTPIFAKIGLEG-VDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAG-GLS 80 (140)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhccc-cCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHH-HHH
Confidence 46889999999999999999999995 9999999999999999999888775544332 35788899999999777 999
Q ss_pred HHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhh
Q 017528 90 LDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLA 153 (370)
Q Consensus 90 ~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~ 153 (370)
+.+||.|++...++.+.++-.++|+++++++++++|||++.. +|+|+.++.+|+++++
T Consensus 81 wl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~------~~iG~~LI~~Gailvs 138 (140)
T COG2510 81 WLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLP------TWIGIVLIVIGAILVS 138 (140)
T ss_pred HHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHH------HHHHHHHHHhCeeeEe
Confidence 999999999999999999999999999999999999999999 9999999999998875
No 22
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=99.70 E-value=6.2e-14 Score=126.24 Aligned_cols=297 Identities=19% Similarity=0.177 Sum_probs=218.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhCC---CChHHHHHHHHHHHHHHHHHHHhhhhcc----cCCCC------CHHHHHH
Q 017528 11 RPYLTVILIQAIYAGMFLLSKAAFNGG---MNNFVFIFYRQAFATLFVAPISLAVEWK----KAPPL------SFLTFCK 77 (370)
Q Consensus 11 ~~~l~~l~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~r~~~~~l~l~~~~~~~~~~----~~~~~------~~~~~~~ 77 (370)
.-++.++...+.++......|.....+ +.|...+++--.+-.++.....+...+. ..+.. .+++..+
T Consensus 15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk 94 (345)
T KOG2234|consen 15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK 94 (345)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence 557778888899999999999887655 7788888888888888877777664322 11111 3445555
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhccC
Q 017528 78 IFFLSLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNG 157 (370)
Q Consensus 78 ~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~ 157 (370)
..+-+++. .+.+-++|.++.+.+++..++..++-.+.|+++..+++++|++++ ||.++++.+.|+.++..+..
T Consensus 95 ~~vPa~iY-alqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~------Qw~Al~lL~~Gv~~vQ~~~~ 167 (345)
T KOG2234|consen 95 VSVPALIY-ALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRL------QWMALVLLFAGVALVQLPSL 167 (345)
T ss_pred HHHHHHHH-HHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHH------HHHHHHHHHHHHHHHhccCC
Confidence 66666666 777779999999999999999999999999999999999999999 99999999999999874322
Q ss_pred CccccccccccccCCCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHH-HHHHHHHHH
Q 017528 158 PQLRLLCHHHIFGHHNSQQIHGHVSSGKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCF-LSSIQSFAI 236 (370)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~ 236 (370)
+..+. ++ +....+...|....+.+++..+...++-++..|+.+.+..+--.++. ++.+..+..
T Consensus 168 ~~~~a---------------~~-~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~ 231 (345)
T KOG2234|consen 168 SPTGA---------------KS-ESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLT 231 (345)
T ss_pred CCCCc---------------cC-CCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHH
Confidence 21110 00 11456778999999999999999999999999886643444333333 333333333
Q ss_pred HHHhcCCCcccccccchhhHHHHHHHHHHHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHH
Q 017528 237 AIALERDPHEWVLGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGG 316 (370)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~ 316 (370)
.+..+.+...| ..--..|-...+.-++..+.+-.+.....|+.+-..=+....+..+++.+.++.+++-++|....+|.
T Consensus 232 ~~~~d~~~i~~-~gff~G~s~~vw~vVl~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~ 310 (345)
T KOG2234|consen 232 ILLQDGEAINE-YGFFYGYSSIVWLVVLLNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGA 310 (345)
T ss_pred Hhhcccccccc-CCccccccHHHHHHHHHHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHH
Confidence 33332222111 11122334444444556666667777788888887777888899999999999999999999999999
Q ss_pred HHHHHHHHHHhcCcc
Q 017528 317 LLLIGGLYAVLWGKS 331 (370)
Q Consensus 317 ~li~~g~~l~~~~~~ 331 (370)
.+++.++.++...+.
T Consensus 311 ~lVi~Si~lY~~~P~ 325 (345)
T KOG2234|consen 311 LLVILSIFLYSLYPA 325 (345)
T ss_pred HHHHHHHHHhhcCCc
Confidence 999999999984333
No 23
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.67 E-value=1.2e-14 Score=122.49 Aligned_cols=257 Identities=18% Similarity=0.171 Sum_probs=196.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhhHhhhccchhHHHHHH
Q 017528 40 NFVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFL 119 (370)
Q Consensus 40 ~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll 119 (370)
...++|+++....++.-.+..++.+.+ .+...-+....++. .+.+....-+.|++|.|-....+-.++-|+=++++
T Consensus 53 alaLVf~qC~~N~vfAkvl~~ir~~~~---~D~t~~~~YaAcs~-sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMil 128 (337)
T KOG1580|consen 53 ALALVFFQCTANTVFAKVLFLIRKKTE---IDNTPTKMYAACSA-SYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMIL 128 (337)
T ss_pred HHHHHHHHHHHHHHHHHhheeeccccc---ccCCcchHHHHHHH-HHHHHHHhccchhcccCCcHHHhcccCCCcceeee
Confidence 456667777777666655444433221 11111222333332 23555666679999999999889999999999999
Q ss_pred HHHHhhccccccccCccchhhhHHHHHhhhhhhhhccCCccccccccccccCCCCcccccccCCCcchHHHHHHHHHHHH
Q 017528 120 AVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHIFGHHNSQQIHGHVSSGKTWIKGCFIMLSSNT 199 (370)
Q Consensus 120 ~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~ 199 (370)
+.++.|.+.+++ +..+++++++||++..+.++...+. .+.....|.++.+++-.
T Consensus 129 GVl~~~KsY~w~------kY~cVL~IV~GValFmYK~~Kv~g~--------------------e~~t~g~GElLL~lSL~ 182 (337)
T KOG1580|consen 129 GVLFAHKSYHWR------KYCCVLMIVVGVALFMYKENKVGGA--------------------EDKTFGFGELLLILSLA 182 (337)
T ss_pred ehhhhcccccHH------HHHHHHHHHHHHHHhhccccccCCC--------------------cccccchHHHHHHHHHH
Confidence 999999999999 9999999999999998754433222 34456689999999999
Q ss_pred HHHHHHHHHHHHhhcCC-CchhHHHHHHHHHHHHHHHHHHHhcCC--CcccccccchhhHHHHHHHHHHHHHHHHHHHHH
Q 017528 200 SFGLWLVLQGFVMKSYP-SKLLFTTLQCFLSSIQSFAIAIALERD--PHEWVLGWNVRLLAVAYCGIIVTALTYYLQAWV 276 (370)
Q Consensus 200 ~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~a 276 (370)
.-++....+.|..+.+. ....++.+..+.+.+.+....++.+.- .-.+....|..|+.+..+++ ++.+++++.+.-
T Consensus 183 mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~ai-~s~LGQ~fIF~t 261 (337)
T KOG1580|consen 183 MDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYVFWDLTLLAI-ASCLGQWFIFKT 261 (337)
T ss_pred hcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHHHHHHHHHHH-HHHhhhHHHHHH
Confidence 99998888888776543 335788888888888877766554432 22233345667888888887 688999999999
Q ss_pred HhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHh
Q 017528 277 IEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVL 327 (370)
Q Consensus 277 ~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~ 327 (370)
+...+|..-|++....-+|+++.++++++.+++.+||+|.++++.+...=.
T Consensus 262 v~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~ 312 (337)
T KOG1580|consen 262 VEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADV 312 (337)
T ss_pred HHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHh
Confidence 999999999999999999999999999999999999999999999987743
No 24
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=99.66 E-value=6.7e-17 Score=137.48 Aligned_cols=266 Identities=18% Similarity=0.193 Sum_probs=200.2
Q ss_pred HHHHHHHHHHhCCCC-hHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChh
Q 017528 25 GMFLLSKAAFNGGMN-NFVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGITFSLDLYGIALIYTSAT 103 (370)
Q Consensus 25 ~~~~~~k~~~~~~~~-~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~ 103 (370)
.....+....+.|++ |...+|+.+..-+++-.+++.+|. +.. ...|...+++++.- +-++++...|.||++..
T Consensus 32 ~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~--~~~---~~~~~hYilla~~D-VEaNy~vV~AyQyTsmt 105 (336)
T KOG2766|consen 32 STAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRR--KYI---KAKWRHYILLAFVD-VEANYFVVKAYQYTSMT 105 (336)
T ss_pred cchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhh--HHH---HHHHHHhhheeEEe-ecccEEEeeehhhcchH
Confidence 333333333333444 889999999999999999988743 222 23455577778777 66777888999999999
Q ss_pred hHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhccCCccccccccccccCCCCcccccccCC
Q 017528 104 LAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHIFGHHNSQQIHGHVSS 183 (370)
Q Consensus 104 ~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (370)
.++.+-+-..+.+.+++|+++|.|.+.. ++.|+++|+.|++.+.+. +-..+ ++ . +
T Consensus 106 Si~lLDcwaip~v~~lsw~fLktrYrlm------ki~gV~iCi~GvvmvV~s-DV~ag----d~-----------a---g 160 (336)
T KOG2766|consen 106 SIMLLDCWAIPCVLVLSWFFLKTRYRLM------KISGVVICIVGVVMVVFS-DVHAG----DR-----------A---G 160 (336)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHhhh------eeeeEEeEecceEEEEEe-eeccc----cc-----------c---C
Confidence 9999999999999999999999999999 999999999999998863 21111 11 1 4
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhhHHHHHH-H
Q 017528 184 GKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDPHEWVLGWNVRLLAVAYC-G 262 (370)
Q Consensus 184 ~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g 262 (370)
..+..+|+++.++++-+||+.++..+.+.++.+ ....+....+++++++.+- ++.+.... ....+ ++....++ .
T Consensus 161 gsnp~~GD~lvi~GATlYaVSNv~EEflvkn~d-~~elm~~lgLfGaIIsaIQ-~i~~~~~~-~tl~w--~~~i~~yl~f 235 (336)
T KOG2766|consen 161 GSNPVKGDFLVIAGATLYAVSNVSEEFLVKNAD-RVELMGFLGLFGAIISAIQ-FIFERHHV-STLHW--DSAIFLYLRF 235 (336)
T ss_pred CCCCccCcEEEEecceeeeeccccHHHHHhcCc-HHHHHHHHHHHHHHHHHHH-Hhhhccce-eeEee--hHHHHHHHHH
Confidence 567789999999999999999999999999875 5899999999999999887 44444211 11111 12222222 2
Q ss_pred HHHHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHhc
Q 017528 263 IIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVLW 328 (370)
Q Consensus 263 ~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~ 328 (370)
.++...-|.+.-..+|..+++...+-..++-.++.+. ..||-+.+|...+..+.+..|.+++..
T Consensus 236 ~L~MFllYsl~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~ 299 (336)
T KOG2766|consen 236 ALTMFLLYSLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYST 299 (336)
T ss_pred HHHHHHHHHhhHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeec
Confidence 2334444455555678888888888888888888888 568888999999999999999999843
No 25
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.61 E-value=6.5e-14 Score=124.24 Aligned_cols=230 Identities=16% Similarity=0.148 Sum_probs=168.8
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhh
Q 017528 71 SFLTFCKIFFLSLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAA 150 (370)
Q Consensus 71 ~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~ 150 (370)
++++..++.+-+++. .+.+.+.+.++++.+++..+++.++..++|++++++++|+|++.+ ||.++.+.++|++
T Consensus 13 ~~~~~~~~~vPA~lY-~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~------qW~aL~lL~~Gv~ 85 (244)
T PF04142_consen 13 SPKDTLKLAVPALLY-AIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRR------QWLALFLLVAGVV 85 (244)
T ss_pred hHHHHHHHHHHHHHH-HHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchh------hHHHHHHHHHHHh
Confidence 367777788888776 889999999999999999999999999999999999999999999 9999999999999
Q ss_pred hhhhccCCccccccccccccCCCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCch-hHHHHHHHHH
Q 017528 151 TLAFYNGPQLRLLCHHHIFGHHNSQQIHGHVSSGKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKL-LFTTLQCFLS 229 (370)
Q Consensus 151 li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~-~~~~~~~~~~ 229 (370)
++...+....+.++.. . .+.+. ...+...|.++.++++++.++..++.+|..|+.+.+. .........+
T Consensus 86 lv~~~~~~~~~~~~~~--~-------~~~~~-~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~g 155 (244)
T PF04142_consen 86 LVQLSSSQSSDNSSSS--S-------VHHDA-SNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFG 155 (244)
T ss_pred eeecCCcccccccccc--c-------ccccc-ccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHH
Confidence 9875322211100000 0 00000 2345678999999999999999999999999875333 3344444555
Q ss_pred HHHHHHHHHHhcCC-CcccccccchhhHHHHHHHHHHHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccc
Q 017528 230 SIQSFAIAIALERD-PHEWVLGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEII 308 (370)
Q Consensus 230 ~i~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~ 308 (370)
.+..++.....+.+ ..+... ...+-...+.-++...++-.+....+|+.+...=+.....+.+++.++++++|+.++
T Consensus 156 i~~~~~~~~~~~~~~~~~~g~--f~G~~~~~~~~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~ 233 (244)
T PF04142_consen 156 ILFNLLALLLSDGSAISESGF--FHGYSWWVWIVIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPP 233 (244)
T ss_pred HHHHHHHHhcccccccccCCc--hhhcchHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 55555443333221 111111 122222333445566777777888999999999999999999999999999999999
Q ss_pred hhhhHHHHHHH
Q 017528 309 TLGRILGGLLL 319 (370)
Q Consensus 309 ~~~~~iG~~li 319 (370)
+....+|++++
T Consensus 234 s~~f~lg~~~V 244 (244)
T PF04142_consen 234 SLSFLLGAALV 244 (244)
T ss_pred chHHhhheecC
Confidence 99999998753
No 26
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.58 E-value=1.7e-12 Score=115.39 Aligned_cols=286 Identities=14% Similarity=0.077 Sum_probs=217.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhCCCC-hHHHHH--HHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHH
Q 017528 11 RPYLTVILIQAIYAGMFLLSKAAFNGGMN-NFVFIF--YRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGIT 87 (370)
Q Consensus 11 ~~~l~~l~~~~~~~~~~~~~k~~~~~~~~-~~~~~~--~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 87 (370)
.+++..+.-++.=-...++.|.+... ++ |..+.. .+.+.+.+.+...-..+ --+.++++++..+..+...++. .
T Consensus 12 ~~l~sa~~Y~~sS~lm~vvNK~vls~-y~f~~~l~l~~~Q~l~s~~~v~~lk~~~-lv~~~~l~~~~~kk~~P~~~lf-~ 88 (314)
T KOG1444|consen 12 SPLLSALFYCLSSILMTVVNKIVLSS-YNFPMGLLLMLLQSLASVLVVLVLKRLG-LVNFRPLDLRTAKKWFPVSLLF-V 88 (314)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhc-CCCcHHHHHHHHHHHHHHHHHHHHHHhc-eeecCCcChHHHHHHccHHHHH-H
Confidence 34666666666666677888998876 43 444444 78877777666543331 1234567788888888888776 7
Q ss_pred HHHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhccCCccccccccc
Q 017528 88 FSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHH 167 (370)
Q Consensus 88 ~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~~~~~~~ 167 (370)
++...-..+++|.+.....++.+..|+++++....++|.+.+.+ .|.++....+|.......+
T Consensus 89 ~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~------v~~Sv~~m~~~s~~~~~~d----------- 151 (314)
T KOG1444|consen 89 GMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNK------VWASVFAMIIGSVAAAFTD----------- 151 (314)
T ss_pred HHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhh------HHHHHHHHHHHHHhhcccc-----------
Confidence 77778889999999999999999999999999999987555555 9999999999888866531
Q ss_pred cccCCCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-CchhHHHHHHHHHHHHHHHHHHHhcCCCcc
Q 017528 168 IFGHHNSQQIHGHVSSGKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYP-SKLLFTTLQCFLSSIQSFAIAIALERDPHE 246 (370)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 246 (370)
......|..+++...++.+.+.+..|+..+..+ +.....++..+.+........+++++.. .
T Consensus 152 ----------------~sf~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~-~ 214 (314)
T KOG1444|consen 152 ----------------LSFNLRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELD-A 214 (314)
T ss_pred ----------------ceecchhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchH-H
Confidence 122235899999999999999999998776544 4578889999999988888776665421 1
Q ss_pred cc-----cccchhhHHHHHHHHHHHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHH
Q 017528 247 WV-----LGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIG 321 (370)
Q Consensus 247 ~~-----~~~~~~~~~l~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~ 321 (370)
.. ......+..+++.++++.++.|. -.++.+..++...++++..+...+.+-..++.+++.++...+|..+-+.
T Consensus 215 l~~~~~~~~~~~~~~~~~lScv~gf~isy~-s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ 293 (314)
T KOG1444|consen 215 LSLNFDNWSDSSVLVVMLLSCVMGFGISYT-SFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFF 293 (314)
T ss_pred HHhhcccccchhHHHHHHHHHHHHHHHHHH-HHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhh
Confidence 11 11233456667767665555554 5699999999999999988888888888888999999999999999999
Q ss_pred HHHHHhcCcchhh
Q 017528 322 GLYAVLWGKSKEQ 334 (370)
Q Consensus 322 g~~l~~~~~~~~~ 334 (370)
|-+++++.+.+++
T Consensus 294 ggv~Y~~~~~~~k 306 (314)
T KOG1444|consen 294 GGVLYSYATFRKK 306 (314)
T ss_pred hhhHHhhhhhhhc
Confidence 9999988765543
No 27
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=99.55 E-value=2.3e-12 Score=113.01 Aligned_cols=269 Identities=14% Similarity=0.162 Sum_probs=194.3
Q ss_pred HHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhhcccC---CCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHh
Q 017528 23 YAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKKA---PPLSFLTFC-KIFFLSLIGITFSLDLYGIALI 98 (370)
Q Consensus 23 ~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~---~~~~~~~~~-~~~~~g~~~~~~~~~~~~~al~ 98 (370)
.+..+...+.-.+. -=|..++.++.++-.++........+++.. ...+|++.. +...+++.. +....+-+++++
T Consensus 29 i~Ltf~~~~~~~~f-~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalat-a~DIGLSN~sl~ 106 (349)
T KOG1443|consen 29 IGLTFYFKWLTKNF-HFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALAT-ALDIGLSNWSLE 106 (349)
T ss_pred HHHHHHhhhhhcCc-CCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhh-hcccccccceee
Confidence 34444444433332 228888888888887777666554333322 245666644 455666665 888888899999
Q ss_pred hcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhccCCccccccccccccCCCCcccc
Q 017528 99 YTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHIFGHHNSQQIH 178 (370)
Q Consensus 99 ~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (370)
|++.+..++..+..++|+.+++.++-=||+++. -..-++++.+|+.+..+.
T Consensus 107 yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~------L~l~v~lI~~Glflft~K----------------------- 157 (349)
T KOG1443|consen 107 YVTLSLYTMTKSSSILFILLFSLIFKLEKFRWA------LVLIVLLIAVGLFLFTYK----------------------- 157 (349)
T ss_pred eeeeeeeeeccccHHHHHHHHHHHHHhHHHHHH------HHHHHHHHhhheeEEEec-----------------------
Confidence 999999999999999999999999998999987 777778888888888763
Q ss_pred cccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCC----CchhHHHHHHHHHHHHHHHHHHHhcCCCc-----cccc
Q 017528 179 GHVSSGKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYP----SKLLFTTLQCFLSSIQSFAIAIALERDPH-----EWVL 249 (370)
Q Consensus 179 ~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~----~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-----~~~~ 249 (370)
+.+-...|.++..++.++.++--...+...++.+ +|....+.......+.++|..+..|+... .++.
T Consensus 158 ----sTqf~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~ 233 (349)
T KOG1443|consen 158 ----STQFNIEGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRF 233 (349)
T ss_pred ----ccceeehhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHh
Confidence 2233457888888888888887777776666544 78999999999999999999888887422 1222
Q ss_pred ccchhhHHHHHHHHHHHHHHH---HHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHH
Q 017528 250 GWNVRLLAVAYCGIIVTALTY---YLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAV 326 (370)
Q Consensus 250 ~~~~~~~~l~~~g~~~~~~~~---~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~ 326 (370)
.++...+..+..-.++...++ ..-+..+.+++....++.+...-+.+.+++..+.+|+++...|.|..+...|+.+.
T Consensus 234 ~d~~~~~rv~g~i~l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~ 313 (349)
T KOG1443|consen 234 QDTGLILRVIGLISLGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLH 313 (349)
T ss_pred cCccHHHHHHHHHHHHHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHh
Confidence 222112221111111222333 22345678889999999999999999999999999999999999999999999988
No 28
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.55 E-value=2.1e-13 Score=104.20 Aligned_cols=135 Identities=15% Similarity=0.119 Sum_probs=115.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHHHH
Q 017528 190 GCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDPHEWVLGWNVRLLAVAYCGIIVTALT 269 (370)
Q Consensus 190 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 269 (370)
..++++++++.+++..++.|--.++. ||..-+..+.....+.+....+..++. +.....+++.|..++..| ++++++
T Consensus 4 ~~~~ALLsA~fa~L~~iF~KIGl~~v-dp~~At~IRtiVi~~~l~~v~~~~g~~-~~~~~~~~k~~lflilSG-la~gls 80 (140)
T COG2510 4 AIIYALLSALFAGLTPIFAKIGLEGV-DPDFATTIRTIVILIFLLIVLLVTGNW-QAGGEIGPKSWLFLILSG-LAGGLS 80 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccc-CccHHHHHHHHHHHHHHHHHHHhcCce-ecccccCcceehhhhHHH-HHHHHH
Confidence 47899999999999999999888876 568888888888888887766554442 222223567788888877 589999
Q ss_pred HHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHh
Q 017528 270 YYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVL 327 (370)
Q Consensus 270 ~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~ 327 (370)
..+|+++++..+++++.++..++|+++.+++++++||+++..+++|+++|++|.++..
T Consensus 81 wl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs 138 (140)
T COG2510 81 WLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS 138 (140)
T ss_pred HHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence 9999999999999999999999999999999999999999999999999999988764
No 29
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.54 E-value=2.8e-14 Score=113.78 Aligned_cols=125 Identities=23% Similarity=0.311 Sum_probs=111.6
Q ss_pred HHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 017528 21 AIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGITFSLDLYGIALIYT 100 (370)
Q Consensus 21 ~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~ 100 (370)
++||...++.|...++ .||...+++|+.++.+ ++++....+++..++.+++.+......|.++...++.+++++++++
T Consensus 1 ~~~a~~~~~~k~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 78 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLKK-ISPLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYI 78 (126)
T ss_pred ceeeeHHHHHHHHhcc-CCHHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhc
Confidence 4699999999999997 9999999999999998 6666555454444566788888889999887689999999999999
Q ss_pred ChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhh
Q 017528 101 SATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLA 153 (370)
Q Consensus 101 ~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~ 153 (370)
+++.++++.++.|+++.+++++++||+++.+ +++|+.+++.|++++.
T Consensus 79 ~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~------~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 79 SASIVSILQYLSPVFAAILGWLFLGERPSWR------QIIGIILIIIGVVLIS 125 (126)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999 9999999999998865
No 30
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.42 E-value=1.2e-11 Score=108.57 Aligned_cols=264 Identities=15% Similarity=0.160 Sum_probs=204.3
Q ss_pred ChHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhhHhhhccchhHHHHH
Q 017528 39 NNFVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFF 118 (370)
Q Consensus 39 ~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~l 118 (370)
++..+.+.+.+.+.++-...+.. ++.. ...++.|+.....++.. ..+..+-+.|++|.+-....+-.++--+-+++
T Consensus 50 ~~~fL~~~q~l~~~~~s~~~l~~--~k~~-~~~~apl~~y~~is~tn-~~s~~~~yeaLKyvSyPtq~LaKscKmIPVml 125 (327)
T KOG1581|consen 50 HSLFLVFCQRLVALLVSYAMLKW--WKKE-LSGVAPLYKYSLISFTN-TLSSWCGYEALKYVSYPTQTLAKSCKMIPVML 125 (327)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhc--cccc-CCCCCchhHHhHHHHHh-hcchHHHHHHHHhccchHHHHHHHhhhhHHHH
Confidence 47788888888887777554433 2222 23345577777778777 77888999999999999888888999999999
Q ss_pred HHHHHhhccccccccCccchhhhHHHHHhhhhhhhhccCCccccccccccccCCCCcccccccCCCcchHHHHHHHHHHH
Q 017528 119 LAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHIFGHHNSQQIHGHVSSGKTWIKGCFIMLSSN 198 (370)
Q Consensus 119 l~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~ 198 (370)
++.++.+.|++.. +.....++-.|+.+.+..+... + .+.+ ...+...|..+....-
T Consensus 126 mg~Lvy~~ky~~~------eYl~~~LIs~GvsiF~l~~~s~-s-------------~~~~----g~~ns~~G~~Ll~~~L 181 (327)
T KOG1581|consen 126 MGTLVYGRKYSSF------EYLVAFLISLGVSIFSLFPNSD-S-------------SSKS----GRENSPIGILLLFGYL 181 (327)
T ss_pred HHHHHhcCccCcH------HHHHHHHHHhheeeEEEecCCC-C-------------cccc----CCCCchHhHHHHHHHH
Confidence 9999999999999 9999999999998887643211 0 0000 3345668999999999
Q ss_pred HHHHHHHHHHHHHhhcCC-CchhHHHHHHHHHHHHHHHHHHHhcCC-Cc--ccccccchhhHHHHHHHHHHHHHHHHHHH
Q 017528 199 TSFGLWLVLQGFVMKSYP-SKLLFTTLQCFLSSIQSFAIAIALERD-PH--EWVLGWNVRLLAVAYCGIIVTALTYYLQA 274 (370)
Q Consensus 199 ~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~--~~~~~~~~~~~~l~~~g~~~~~~~~~~~~ 274 (370)
+.=+..+..+.++.++.+ ++..+++...+++.+...... +..+. .. ++....+..++-++.... ++++++.+.+
T Consensus 182 ~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~l-i~qg~~~~av~F~~~hp~~~~Di~l~s~-~gavGQ~FI~ 259 (327)
T KOG1581|consen 182 LFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYL-ILQGHLLPAVSFIKEHPDVAFDILLYST-CGAVGQLFIF 259 (327)
T ss_pred HHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhh-hcCCCCchHHHHHHcChhHHHHHHHHHH-hhhhhhheeh
Confidence 999999999998888655 668889999999888887653 33332 11 222223344555555555 5789999999
Q ss_pred HHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHhcCcch
Q 017528 275 WVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVLWGKSK 332 (370)
Q Consensus 275 ~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~~~ 332 (370)
+-+++.++...+.++.+.-++++.++.+.+|.+++..|++|..+++.|+.+-...+.+
T Consensus 260 ~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~ 317 (327)
T KOG1581|consen 260 YTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK 317 (327)
T ss_pred hhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999986655444
No 31
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.42 E-value=6.8e-13 Score=105.72 Aligned_cols=125 Identities=22% Similarity=0.326 Sum_probs=107.6
Q ss_pred HHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHHHHHHHHHHHHh
Q 017528 199 TSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDPHEWVLGWNVRLLAVAYCGIIVTALTYYLQAWVIE 278 (370)
Q Consensus 199 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~a~~ 278 (370)
++||.+.+..|+..++. +|.....+++..+.+ .++...+.+... ....+...+...++.+++++++++.+++++++
T Consensus 1 ~~~a~~~~~~k~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 76 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLKKI-SPLSITFWRFLIAGI-LLILLLILGRKP--FKNLSPRQWLWLLFLGLLGTALAYLLYFYALK 76 (126)
T ss_pred ceeeeHHHHHHHHhccC-CHHHHHHHHHHHHHH-HHHHHHhhcccc--ccCCChhhhhhhhHhhccceehHHHHHHHHHH
Confidence 47899999999998886 579999999999998 666665555432 22234556777888888888999999999999
Q ss_pred ccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHh
Q 017528 279 KKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVL 327 (370)
Q Consensus 279 ~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~ 327 (370)
+.+++.++.+.+++|+++.++++++++|++++.+++|+++++.|+++..
T Consensus 77 ~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 77 YISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred hcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999998864
No 32
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=99.40 E-value=8.7e-12 Score=107.98 Aligned_cols=274 Identities=15% Similarity=0.091 Sum_probs=188.4
Q ss_pred HHHHHHHHHHHh---CCC----ChHHHHHHHHHHHHHHHHHHHhhhhcccCCC---------------CCHHHHHHHHHH
Q 017528 24 AGMFLLSKAAFN---GGM----NNFVFIFYRQAFATLFVAPISLAVEWKKAPP---------------LSFLTFCKIFFL 81 (370)
Q Consensus 24 ~~~~~~~k~~~~---~~~----~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~---------------~~~~~~~~~~~~ 81 (370)
+.+.++.|++-+ +|- +|+.....-++.-++++..+.+++.+...+. +++.. .+.-
T Consensus 16 s~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p~l---fl~P 92 (372)
T KOG3912|consen 16 SFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNPVL---FLPP 92 (372)
T ss_pred cHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCcce---ecCh
Confidence 446667776543 122 2666666666666677777777654433221 12222 2223
Q ss_pred HHHHHHHHHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhccCCccc
Q 017528 82 SLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLR 161 (370)
Q Consensus 82 g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~ 161 (370)
.+|- ..+..+.|.++.+++++.-+.+.....+|+.+++.-+++.+++.+ +|.|+.....|++++...+ ...
T Consensus 93 al~D-i~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~------qWl~i~fv~lGlviVg~~d--~~~ 163 (372)
T KOG3912|consen 93 ALCD-IAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGR------QWLGILFVSLGLVIVGSLD--VHL 163 (372)
T ss_pred HHHH-HhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchh------hHHHHHHHHhhhheeeeee--ccc
Confidence 4444 455566779999999999999999999999999999999999999 9999999999999987531 111
Q ss_pred cccccccccCCCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-CchhHHHHHHHHHHHHHHHHHHHh
Q 017528 162 LLCHHHIFGHHNSQQIHGHVSSGKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYP-SKLLFTTLQCFLSSIQSFAIAIAL 240 (370)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~ 240 (370)
+ +++.. +.++...|+++.+.+-+.-|+..++-+|..++.+ +|.....|...++.++...+....
T Consensus 164 ~---------~~p~~------d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m 228 (372)
T KOG3912|consen 164 V---------TDPYT------DYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPM 228 (372)
T ss_pred c---------cCCcc------ccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHH
Confidence 1 00000 3456789999999999999999999988887766 889999999999965444333222
Q ss_pred cC-C-Ccccccccc---hh------------hHHHHHHHHHHHHHHHHHHHH----HHhccCceeEEeccchHHHHHHHH
Q 017528 241 ER-D-PHEWVLGWN---VR------------LLAVAYCGIIVTALTYYLQAW----VIEKKGPVFLAMSTPLALIFTTIA 299 (370)
Q Consensus 241 ~~-~-~~~~~~~~~---~~------------~~~l~~~g~~~~~~~~~~~~~----a~~~~~~~~~s~~~~~~pi~~~~~ 299 (370)
.. + .+.++.++. .+ ...++..|. .++..+++. -.|..++++-.++-.+...+-.++
T Consensus 229 ~yi~~~~sfS~~~~g~~eD~~~~~~~~~e~p~l~val~~~---~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~ 305 (372)
T KOG3912|consen 229 YYIPSGDSFSCNPRGVLEDWGDAFAALQESPSLAVALIGF---TVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVF 305 (372)
T ss_pred hheecCCcCcCCCCcchhhHHHHHHHhcCCchhHHHHhhh---hhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHh
Confidence 11 0 111111110 01 122333333 333333333 245667777788889999999999
Q ss_pred HHHHhcccchhhhHHHHHHHHHHHHHHh
Q 017528 300 SVFLLCEIITLGRILGGLLLIGGLYAVL 327 (370)
Q Consensus 300 ~~~~~~e~~~~~~~iG~~li~~g~~l~~ 327 (370)
+.....|.+...|+.|.++.+.|+++|+
T Consensus 306 si~m~~E~f~llqilGFliLi~Gi~lY~ 333 (372)
T KOG3912|consen 306 SIAMGWEYFHLLQILGFLILIMGIILYN 333 (372)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999986
No 33
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.38 E-value=1.5e-12 Score=112.33 Aligned_cols=268 Identities=14% Similarity=0.088 Sum_probs=195.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhccc----CC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhhHhhhccchh
Q 017528 40 NFVFIFYRQAFATLFVAPISLAVEWKK----AP--PLSFLTFCKIFFLSLIGITFSLDLYGIALIYTSATLAAATTNCLP 113 (370)
Q Consensus 40 ~~~~~~~r~~~~~l~l~~~~~~~~~~~----~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p 113 (370)
|...++.+.+....+...+.....+-. .+ +++.+..+...-+.+.. .++..+-+++++|.+++...+-.++..
T Consensus 61 plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVf-i~mI~fnnlcL~yVgVaFYyvgRsLtt 139 (347)
T KOG1442|consen 61 PLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVVF-ILMISFNNLCLKYVGVAFYYVGRSLTT 139 (347)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhhee-eeehhccceehhhcceEEEEeccchhh
Confidence 788888888888777666554422221 12 23444445555455443 444445579999999999999999999
Q ss_pred HHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhccCCccccccccccccCCCCcccccccCCCcchHHHHHH
Q 017528 114 AITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHIFGHHNSQQIHGHVSSGKTWIKGCFI 193 (370)
Q Consensus 114 i~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 193 (370)
+|+.+++++++|+|-+.. -..+..+++.|-.+=..++|. .+.-...|.++
T Consensus 140 vFtVlLtyvllkqkTs~~------~~~~C~lIi~GF~lGvdqE~~------------------------~~~ls~~Gvif 189 (347)
T KOG1442|consen 140 VFTVLLTYVLLKQKTSFF------ALGCCLLIILGFGLGVDQEGS------------------------TGTLSWIGVIF 189 (347)
T ss_pred hHHHHhHHhhcccccccc------cceeehhheehheeccccccc------------------------cCccchhhhHH
Confidence 999999999999999888 777777777776553321110 22334589999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCC-CchhHHHHHHHHHHHHHHHHHHHhcCCCcccc--cc-cchhhHHHHHHHHHHHHHH
Q 017528 194 MLSSNTSFGLWLVLQGFVMKSYP-SKLLFTTLQCFLSSIQSFAIAIALERDPHEWV--LG-WNVRLLAVAYCGIIVTALT 269 (370)
Q Consensus 194 ~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--~~-~~~~~~~l~~~g~~~~~~~ 269 (370)
...+.++-|+..+..|+.....+ .-+.++++....+.++.+|...+.+.-...+. .. ....|..+...|+++..++
T Consensus 190 GVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsglfgF~mg 269 (347)
T KOG1442|consen 190 GVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGLFGFAMG 269 (347)
T ss_pred HHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999997765544 33578899999999999998877665222222 11 2233555555565544444
Q ss_pred HHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHhcCcchhhhhccc
Q 017528 270 YYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVLWGKSKEQKMVDK 339 (370)
Q Consensus 270 ~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~~~~~~~~~~ 339 (370)
|. ..+=+|.++|.+-.+-....-....+++..+.+|.-+..-|.|-.+++.|...+++.|.++.+++.+
T Consensus 270 yv-Tg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em~~~~~ 338 (347)
T KOG1442|consen 270 YV-TGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEMRKASA 338 (347)
T ss_pred he-eeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHHHhhcc
Confidence 43 4456889999999999999999999999999999999999999999999999999987776655544
No 34
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=99.32 E-value=9.4e-10 Score=97.42 Aligned_cols=252 Identities=15% Similarity=0.098 Sum_probs=176.6
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhhhhcccCCCCC--HHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhhHhhhc-cchhH
Q 017528 38 MNNFVFIFYRQAFATLFVAPISLAVEWKKAPPLS--FLTFCKIFFLSLIGITFSLDLYGIALIYTSATLAAATT-NCLPA 114 (370)
Q Consensus 38 ~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~-~~~pi 114 (370)
-+|.+..+--...+.++-+...++ .+ +..+ .+.+...++.|++. ..++...+.|+++.+.+.+.++. ..+-+
T Consensus 10 G~~~~Q~lG~t~Gali~alv~~~~-~~---p~~~~~~~~~~~~~lsG~~W-~iGq~~qf~s~~~~GVS~tmPiStg~QLv 84 (269)
T PF06800_consen 10 GKPANQILGTTIGALIFALVVFLF-RQ---PAFSMSGTSFIVAFLSGAFW-AIGQIGQFKSFKKIGVSKTMPISTGLQLV 84 (269)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHH-hC---CCcchHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcceeeeccchhHHHH
Confidence 445555554444444444444443 22 2333 48899999999998 99999999999999999999999 88888
Q ss_pred HHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhccCCccccccccccccCCCCcccccccCCCcchHHHHHHH
Q 017528 115 ITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHIFGHHNSQQIHGHVSSGKTWIKGCFIM 194 (370)
Q Consensus 115 ~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 194 (370)
.+.+++.+++||--+..++ ..-.+++++.++|+++.+..+++.... +++.+...|....
T Consensus 85 g~sl~gv~~fgEW~~~~~~--~~G~~Al~liiiGv~lts~~~~~~~~~-------------------~~~~~~~kgi~~L 143 (269)
T PF06800_consen 85 GTSLIGVLFFGEWTTTTQK--IIGFLALVLIIIGVILTSYQDKKSDKS-------------------SSKSNMKKGILAL 143 (269)
T ss_pred HHHHHHHhhcCCCCCcchH--HHHHHHHHHHHHHHHHhcccccccccc-------------------ccccchhhHHHHH
Confidence 8999999999998776611 113447888899998887643221100 0345667899999
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHHHHHHHHH
Q 017528 195 LSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDPHEWVLGWNVRLLAVAYCGIIVTALTYYLQA 274 (370)
Q Consensus 195 l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~ 274 (370)
+++.+.|..|.+..|.. +. ++.....-+.....+....+..+.+.+ . .....|.. +..|+ .-.++..++.
T Consensus 144 l~stigy~~Y~~~~~~~--~~-~~~~~~lPqaiGm~i~a~i~~~~~~~~---~--~~k~~~~n-il~G~-~w~ignl~~~ 213 (269)
T PF06800_consen 144 LISTIGYWIYSVIPKAF--HV-SGWSAFLPQAIGMLIGAFIFNLFSKKP---F--FEKKSWKN-ILTGL-IWGIGNLFYL 213 (269)
T ss_pred HHHHHHHHHHHHHHHhc--CC-ChhHhHHHHHHHHHHHHHHHhhccccc---c--cccchHHh-hHHHH-HHHHHHHHHH
Confidence 99999999999997663 22 456666666554444444443332111 1 12223333 33344 4678888899
Q ss_pred HHHhccCceeEEeccchHHHHHHHHHHHHhcccchhh----hHHHHHHHHHHHHH
Q 017528 275 WVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLG----RILGGLLLIGGLYA 325 (370)
Q Consensus 275 ~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~----~~iG~~li~~g~~l 325 (370)
.+.++.+.+..=.+.-+.++++.+.+.+++||+=+.+ ..+|+++++.|.++
T Consensus 214 is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il 268 (269)
T PF06800_consen 214 ISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL 268 (269)
T ss_pred HhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence 9999999999999999999999999999999997755 44688888887664
No 35
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.31 E-value=6.5e-11 Score=106.91 Aligned_cols=133 Identities=19% Similarity=0.234 Sum_probs=114.1
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHhCCCC--hHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHH
Q 017528 9 KQRPYLTVILIQAIYAGMFLLSKAAFNGGMN--NFVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGI 86 (370)
Q Consensus 9 ~~~~~l~~l~~~~~~~~~~~~~k~~~~~~~~--~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 86 (370)
..+|.++.+++++.|+...+..|...++ .+ +.....+++.++.+++.++.+..++. +..+++.+...+..++++.
T Consensus 126 ~~~G~~~~l~a~~~~a~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 202 (260)
T TIGR00950 126 NPAGLLLGLGSGISFALGTVLYKRLVKK-EGPELLQFTGWVLLLGALLLLPFAWFLGPN--PQALSLQWGALLYLGLIGT 202 (260)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhHHhhc-CCchHHHHHHHHHHHHHHHHHHHHHhcCCC--CCcchHHHHHHHHHHHHHH
Confidence 4579999999999999999999998875 66 44555578999998888887653322 2335677777888888887
Q ss_pred HHHHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhh
Q 017528 87 TFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAA 150 (370)
Q Consensus 87 ~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~ 150 (370)
..++.+|++++++.+++.++.+.++.|+++.+++++++||+++.. ++.|+.+.+.|+.
T Consensus 203 ~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~------~~~G~~li~~g~~ 260 (260)
T TIGR00950 203 ALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLP------QLIGGALIIAAVL 260 (260)
T ss_pred HHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHhcC
Confidence 899999999999999999999999999999999999999999999 9999999999863
No 36
>PRK13499 rhamnose-proton symporter; Provisional
Probab=99.29 E-value=4.9e-09 Score=96.60 Aligned_cols=302 Identities=14% Similarity=0.092 Sum_probs=184.7
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHH-HHHHHHHHHH---HHHhhhh-cccCCCCCHHHHHHHHHHHH
Q 017528 9 KQRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFY-RQAFATLFVA---PISLAVE-WKKAPPLSFLTFCKIFFLSL 83 (370)
Q Consensus 9 ~~~~~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~-r~~~~~l~l~---~~~~~~~-~~~~~~~~~~~~~~~~~~g~ 83 (370)
...|++..+++.++||+.++..|. .+. .+-..+ .. -.+++.++.- .....+. .......+.+.+...++.|+
T Consensus 5 ~~~G~~~~~i~~~~~GS~~~p~K~-~k~-w~wE~~-W~v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l~G~ 81 (345)
T PRK13499 5 IILGIIWHLIGGASSGSFYAPFKK-VKK-WSWETM-WSVGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFLFGA 81 (345)
T ss_pred hHHHHHHHHHHHHHhhcccccccc-cCC-CchhHH-HHHHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHHHHH
Confidence 567999999999999999999998 332 332211 11 1111111111 1111100 11123356788999999999
Q ss_pred HHHHHHHHHHHHHHhhcChhhHhhhc-cchhHHHHHHHHHHhhccccc-cccCccchhhhHHHHHhhhhhhhhccCCccc
Q 017528 84 IGITFSLDLYGIALIYTSATLAAATT-NCLPAITFFLAVLLRMEVLKL-KTVPGVAKLVGILICIGGAATLAFYNGPQLR 161 (370)
Q Consensus 84 ~~~~~~~~~~~~al~~~~~~~~~~i~-~~~pi~~~ll~~l~~~e~~~~-~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~ 161 (370)
+. ..++..++.++++.+.+.+.++. .+.-+...++..++++|--+. .++-...-.+|++++++|+++.......+.+
T Consensus 82 ~W-~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~~k~~ 160 (345)
T PRK13499 82 LW-GIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQLKER 160 (345)
T ss_pred HH-HhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhhhccc
Confidence 98 99999999999999999999888 899999999999999864311 1222233788899999999998862211111
Q ss_pred cccccccccCCCCcccccccCCCcchHHHHHHHHHHHHHHHHHH-------HHHHHHhhcCCCchhHHHHHHH---HHHH
Q 017528 162 LLCHHHIFGHHNSQQIHGHVSSGKTWIKGCFIMLSSNTSFGLWL-------VLQGFVMKSYPSKLLFTTLQCF---LSSI 231 (370)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~-------v~~~~~~~~~~~~~~~~~~~~~---~~~i 231 (370)
. ++ .+++++.+..+|..+++++++.++.|. ...+...+...++......+.. .+.+
T Consensus 161 ~-~~-------------~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~ 226 (345)
T PRK13499 161 K-MG-------------IKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGA 226 (345)
T ss_pred c-cc-------------cccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHH
Confidence 0 00 000045677899999999999999999 4333321221233433333333 3333
Q ss_pred HHHH-HHHHh--c-CCCccc-ccccc-----hhhHHHHHHHHHHHHHHHHHHHHHHhccCceeEEe---cc-chHHHHHH
Q 017528 232 QSFA-IAIAL--E-RDPHEW-VLGWN-----VRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAM---ST-PLALIFTT 297 (370)
Q Consensus 232 ~~~~-~~~~~--~-~~~~~~-~~~~~-----~~~~~l~~~g~~~~~~~~~~~~~a~~~~~~~~~s~---~~-~~~pi~~~ 297 (370)
+.-. ...+. . .+.... ....+ .....-+..| +.=.+++.++..+-.+.+...... +. .+..+++.
T Consensus 227 ~~n~~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G-~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~Viist 305 (345)
T PRK13499 227 ITNLGFCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAG-VMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGN 305 (345)
T ss_pred HHHHHHHHHHHhhCCCcccchhccccchhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHH
Confidence 3332 22211 1 111101 11110 1111112323 345667777777777776554443 43 77779999
Q ss_pred HHHHHHhcccch------hhhHHHHHHHHHHHHHHhcCc
Q 017528 298 IASVFLLCEIIT------LGRILGGLLLIGGLYAVLWGK 330 (370)
Q Consensus 298 ~~~~~~~~e~~~------~~~~iG~~li~~g~~l~~~~~ 330 (370)
+.+. ++||.=+ ...++|++++++|.++....+
T Consensus 306 lwGi-~lkE~K~a~~k~~~~l~~G~vliI~g~~lig~~~ 343 (345)
T PRK13499 306 LWGL-VLKEWKGASRRPVRVLSLGCVVIILAANIVGLGN 343 (345)
T ss_pred Hhhh-hhhhccCCCccchhHHHHHHHHHHHHHHHHhhcc
Confidence 9999 4888755 667889999999999876543
No 37
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=99.27 E-value=7.7e-11 Score=98.88 Aligned_cols=276 Identities=14% Similarity=0.125 Sum_probs=190.2
Q ss_pred HHHHHHHHhC-CCC-hHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhh
Q 017528 27 FLLSKAAFNG-GMN-NFVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGITFSLDLYGIALIYTSATL 104 (370)
Q Consensus 27 ~~~~k~~~~~-~~~-~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~ 104 (370)
.+-.|...+. |++ -+.+.+++.+.+.+-++.+-..+.-+ .+..+.|.|...-. +. +...+.--.+++|.+...
T Consensus 22 TltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~-fR~t~aK~WfpiSf---LL-v~MIyt~SKsLqyL~vpi 96 (309)
T COG5070 22 TLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVE-FRLTKAKKWFPISF---LL-VVMIYTSSKSLQYLAVPI 96 (309)
T ss_pred HHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhh-eehhhhhhhcCHHH---HH-HHHHHhcccceeeeeeeH
Confidence 3445555543 343 34556667666665555443322111 11222333433322 22 333334458999999999
Q ss_pred HhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhccCCccccccccccccCCCCcccccccCCC
Q 017528 105 AAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHIFGHHNSQQIHGHVSSG 184 (370)
Q Consensus 105 ~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (370)
.+++.++..+.++....+++|.|++-. +....++.+..-++-.+.+ .+... + ..
T Consensus 97 YTiFKNltII~iAygEvl~Fgg~vtsl------~l~SFilMvlSS~va~w~D-~q~~~------~-------------~~ 150 (309)
T COG5070 97 YTIFKNLTIILIAYGEVLFFGGRVTSL------ELLSFILMVLSSVVATWGD-QQASA------F-------------KA 150 (309)
T ss_pred HHHhccceeehhHhhHHHHhcCccchh------hHHHHHHHHHHHHHhccch-hhHHH------H-------------Hh
Confidence 999999999999999999999888888 8888877777766655421 11000 0 22
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-CchhHHHHHHHHHHHHHHHHHHHhcCC-Ccccccc-cchhhHHHHHH
Q 017528 185 KTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYP-SKLLFTTLQCFLSSIQSFAIAIALERD-PHEWVLG-WNVRLLAVAYC 261 (370)
Q Consensus 185 ~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~-~~~~~~~l~~~ 261 (370)
...+.|.+++....+..+++....|+..+-.+ .....+++....+..+++.+.++.|+. +.....+ +.....+....
T Consensus 151 ~~lN~GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~IS 230 (309)
T COG5070 151 QILNPGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFIS 230 (309)
T ss_pred cccCCceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHH
Confidence 34567999999999999999999887655322 227889999999999988888877653 2211111 22334566666
Q ss_pred HHHHHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHhcCcchhh
Q 017528 262 GIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVLWGKSKEQ 334 (370)
Q Consensus 262 g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~~~~~ 334 (370)
|+++-++ -++-.|+++.++.+..++++.++-.-..+.|.++|+|+.+...+..+.+-..+..++...+.+++
T Consensus 231 gl~svgi-Sy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~k~ 302 (309)
T COG5070 231 GLCSVGI-SYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSKKQ 302 (309)
T ss_pred HHHHhhh-hhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7654444 45678999999999999999999999999999999999999999999998888888876655443
No 38
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=99.24 E-value=3.4e-11 Score=94.27 Aligned_cols=104 Identities=25% Similarity=0.313 Sum_probs=87.2
Q ss_pred HHHHHHHHHHHHHHHhhhhccc--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhhHhhhccchhHHHHHHHHH
Q 017528 45 FYRQAFATLFVAPISLAVEWKK--APPLSFLTFCKIFFLSLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVL 122 (370)
Q Consensus 45 ~~r~~~~~l~l~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l 122 (370)
.+|+.++.+++..+...+++.. .+..+++.+.+....|+++...++.++++|+++.+ +.+.++.++.|+++.+++++
T Consensus 2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~ 80 (113)
T PF13536_consen 2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL 80 (113)
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence 4789999999888877743321 22334455667777788886689999999999999 58889999999999999999
Q ss_pred HhhccccccccCccchhhhHHHHHhhhhhhhhc
Q 017528 123 LRMEVLKLKTVPGVAKLVGILICIGGAATLAFY 155 (370)
Q Consensus 123 ~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~ 155 (370)
++|||++++ ++.+++++++|++++...
T Consensus 81 ~~~er~~~~------~~~a~~l~~~Gv~li~~~ 107 (113)
T PF13536_consen 81 FFKERLSPR------RWLAILLILIGVILIAWS 107 (113)
T ss_pred HhcCCCCHH------HHHHHHHHHHHHHHHhhh
Confidence 999999999 999999999999999874
No 39
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=99.23 E-value=2.2e-10 Score=99.23 Aligned_cols=264 Identities=10% Similarity=0.029 Sum_probs=171.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhhHh-hhccchhHHHHHH
Q 017528 41 FVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGITFSLDLYGIALIYTSATLAA-ATTNCLPAITFFL 119 (370)
Q Consensus 41 ~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~-~i~~~~pi~~~ll 119 (370)
..++|.++++-+.--++..- +-...+++.+.|++......- ...+.+-++++++--+--.. ++.+-.++.++.+
T Consensus 34 NLITFaqFlFia~eGlif~s-kf~~~k~kiplk~Y~i~V~mF----F~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~ 108 (330)
T KOG1583|consen 34 NLITFAQFLFIATEGLIFTS-KFFTVKPKIPLKDYAITVAMF----FIVNVTNNYALKFNIPMPLHIIFRSGSLLANMIL 108 (330)
T ss_pred eehHHHHHHHHHHhceeeec-cccccCCCCchhhhheehhee----eeeeeeccceeeecccceEEEEEecCcHHHHHHH
Confidence 55666666655544333321 011123555666665443332 34455557899885444444 4558899999999
Q ss_pred HHHHhhccccccccCccchhhhHHHHHhhhhhhhhccCCccccccccccccCCCCcccccccCCCcchHHHHHHHHHHHH
Q 017528 120 AVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHIFGHHNSQQIHGHVSSGKTWIKGCFIMLSSNT 199 (370)
Q Consensus 120 ~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~ 199 (370)
++++.|.|.+.+ |..++++..+|+++....+.++... +.+..++. +.++....+..|+.+...+-+
T Consensus 109 g~il~~k~Ys~~------Qy~Sv~~iTiGiiIcTl~s~~d~~~--~~~~l~~~------~~~~~~~~w~iGi~lL~~al~ 174 (330)
T KOG1583|consen 109 GWILLGKRYSLR------QYSSVLMITIGIIICTLFSSKDGRS--KLSGLDSG------SAQSDFFWWLIGIALLVFALL 174 (330)
T ss_pred HHHhccceeehh------hhhhHHhhhhhheeEEeecCcchhh--hhcccccC------cccccchHHHHHHHHHHHHHH
Confidence 999999999999 9999999999999988765443322 11111000 011144567889999999999
Q ss_pred HHHHHHHHHHHHhhcCC-CchhHHHHHHHHHHHHHHHHHHHhcCC-Ccc--------------cccccchhhHHHHHHHH
Q 017528 200 SFGLWLVLQGFVMKSYP-SKLLFTTLQCFLSSIQSFAIAIALERD-PHE--------------WVLGWNVRLLAVAYCGI 263 (370)
Q Consensus 200 ~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~--------------~~~~~~~~~~~l~~~g~ 263 (370)
..|.-.++++..-++++ ++-+..++.-..+.. ..++..++ ..+ ....-|..|+.++. .+
T Consensus 175 ~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP----~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl~-n~ 249 (330)
T KOG1583|consen 175 LSAYMGIYQETTYQKYGKHWKEALFYTHFLSLP----LFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLLF-NV 249 (330)
T ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHhccc----hHHHhcchHHHHHHHHhcCcceeccccCccccHHHHHHHH-HH
Confidence 99998888887766655 667777776665544 33333322 001 11112333443333 22
Q ss_pred HHHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHhc
Q 017528 264 IVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVLW 328 (370)
Q Consensus 264 ~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~ 328 (370)
+..-.+.-..+..-...++.+++++..+.-.++.+++.+.|+.++++..|+|..++..|..++..
T Consensus 250 L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~ 314 (330)
T KOG1583|consen 250 LTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFAN 314 (330)
T ss_pred HHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 23333333334444566788999999999999999999999999999999999999999998763
No 40
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=99.20 E-value=2e-10 Score=94.64 Aligned_cols=209 Identities=16% Similarity=0.103 Sum_probs=154.0
Q ss_pred HHHHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhccCCcccccccc
Q 017528 87 TFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHH 166 (370)
Q Consensus 87 ~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~~~~~~ 166 (370)
.+.++.|..|++..+++.++.+..+...|+.+++++++|+|+... ++++.++++.|++++.+.++
T Consensus 64 t~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~------kIlaailAI~GiVmiay~DN--------- 128 (290)
T KOG4314|consen 64 TGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGF------KILAAILAIGGIVMIAYADN--------- 128 (290)
T ss_pred ecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhh------hHHHHHHHhCcEEEEEeccc---------
Confidence 677889999999999999999999999999999999999999999 99999999999999986432
Q ss_pred ccccCCCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHH----HHHHHHHHHhcC
Q 017528 167 HIFGHHNSQQIHGHVSSGKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSS----IQSFAIAIALER 242 (370)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~----i~~~~~~~~~~~ 242 (370)
.....+.|+.++..+++..|+|-+.-|+.....+- -....++...+. +...|.....-.
T Consensus 129 ----------------~~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~-Gdaa~FmS~LGF~NL~~~~~~~lIL~~T 191 (290)
T KOG4314|consen 129 ----------------EHADEIIGIACAVGSAFMAALYKVLFKMFIGNANF-GDAAHFMSCLGFFNLCFISFPALILAFT 191 (290)
T ss_pred ----------------hhhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcc-hhHHHHHHHHHHHHHHHHhhhHHHHHHh
Confidence 23345689999999999999999999998766431 122222222222 222222212112
Q ss_pred CCcccccccchhhHHHHHHHHHHHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHH
Q 017528 243 DPHEWVLGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGG 322 (370)
Q Consensus 243 ~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g 322 (370)
..++|.......|..+...+.+..+ -..+.+.++....|...|+-......-....+.++-+-..+.....|.+++++|
T Consensus 192 ~VE~~qsFA~~PWG~l~G~A~L~lA-FN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~ 270 (290)
T KOG4314|consen 192 GVEHLQSFAAAPWGCLCGAAGLSLA-FNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIG 270 (290)
T ss_pred chHHHHHHhhCCchhhhhHHHHHHH-HhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 2233322222335555555554332 234567888899999999988888888889998776777889999999999999
Q ss_pred HHHHhc
Q 017528 323 LYAVLW 328 (370)
Q Consensus 323 ~~l~~~ 328 (370)
.++...
T Consensus 271 FiLiii 276 (290)
T KOG4314|consen 271 FILIII 276 (290)
T ss_pred HHheec
Confidence 988754
No 41
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=99.18 E-value=2.7e-09 Score=97.61 Aligned_cols=273 Identities=15% Similarity=0.142 Sum_probs=154.9
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhhcccCCCCC-HHH-HHHHHHHHHHH
Q 017528 8 DKQRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKKAPPLS-FLT-FCKIFFLSLIG 85 (370)
Q Consensus 8 ~~~~~~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~-~~~-~~~~~~~g~~~ 85 (370)
+...|.+.++.++++.+....+.|....+ .+. ...+.+.+ ++. ....++.|++.
T Consensus 4 ~~~iGv~lav~ss~~~~~g~~lqk~~~~r-~~~-----------------------~~~~~~~~~~~~l~~~~W~~G~~~ 59 (300)
T PF05653_consen 4 DFYIGVLLAVVSSIFIAVGFNLQKKSHLR-LPR-----------------------GSLRAGSGGRSYLRRPLWWIGLLL 59 (300)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhc-----------------------ccccccchhhHHHhhHHHHHHHHH
Confidence 35679999999999999999999987554 110 00001000 111 12334455555
Q ss_pred HHHHHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhccCCccccccc
Q 017528 86 ITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCH 165 (370)
Q Consensus 86 ~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~~~~~ 165 (370)
..++..+-+.|+.+.|.+.++++..+.-++.++++..++|||++.+ ++.|+.+++.|..++... +++.+...+
T Consensus 60 ~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~------~~~G~~l~i~G~~liv~~-~~~~~~~~t 132 (300)
T PF05653_consen 60 MVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRR------DIVGCALIILGSVLIVIF-APKEEPIHT 132 (300)
T ss_pred HhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHh------HHhhHHHHHhhheeeEEe-CCCCCCcCC
Confidence 5667777789999999999999999999999999999999999999 999999999999877653 332211111
Q ss_pred cccccCCCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHH-------HHHHHHH
Q 017528 166 HHIFGHHNSQQIHGHVSSGKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSI-------QSFAIAI 238 (370)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i-------~~~~~~~ 238 (370)
.++..+.- .+... ... ..+...++..+.....+|..++ +...........++. +...+..
T Consensus 133 ~~~l~~~~---------~~~~f-l~y-~~~~~~~~~~L~~~~~~r~g~~--~i~vyi~i~sl~Gs~tvl~~K~i~~~i~~ 199 (300)
T PF05653_consen 133 LDELIALL---------SQPGF-LVY-FILVLVLILILIFFIKPRYGRR--NILVYISICSLIGSFTVLSAKAISILIKL 199 (300)
T ss_pred HHHHHHHh---------cCcce-ehh-HHHHHHHHHHHHHhhcchhccc--ceEEEEEEeccccchhhhHHHHHHHHHHH
Confidence 10000000 00000 111 1111112222222222222221 111111111111111 1111111
Q ss_pred HhcCCCcccccccchhhHHHHHHHHHHHHHHHHHHHHHHhccCceeEEeccch-HHHHHHHHHHHHhcccc--hh----h
Q 017528 239 ALERDPHEWVLGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPL-ALIFTTIASVFLLCEII--TL----G 311 (370)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~-~pi~~~~~~~~~~~e~~--~~----~ 311 (370)
..++ ..++ ..+..|..++. -+.+......+.++++++.+++.+.++.+. -...+.+-|.++++|.- +. .
T Consensus 200 ~~~g-~~~f--~~~~~y~l~~~-~v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~ 275 (300)
T PF05653_consen 200 TFSG-DNQF--TYPLTYLLLLV-LVVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIG 275 (300)
T ss_pred HhcC-chhh--hhhHHHHHHHH-HHHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHH
Confidence 1111 1111 22333433333 344566777888999999999999987665 55566666777888753 44 3
Q ss_pred hHHHHHHHHHHHHHHhc
Q 017528 312 RILGGLLLIGGLYAVLW 328 (370)
Q Consensus 312 ~~iG~~li~~g~~l~~~ 328 (370)
...|+.+++.|+++...
T Consensus 276 ~~~G~~~ii~GV~lL~~ 292 (300)
T PF05653_consen 276 FLCGFLIIIIGVFLLSS 292 (300)
T ss_pred HHHHHHHHHHhhheeec
Confidence 45678888889888754
No 42
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=99.17 E-value=4e-10 Score=93.21 Aligned_cols=138 Identities=20% Similarity=0.181 Sum_probs=113.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhc------CCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccc---c-----c-cchh
Q 017528 190 GCFIMLSSNTSFGLWLVLQGFVMKS------YPSKLLFTTLQCFLSSIQSFAIAIALERDPHEWV---L-----G-WNVR 254 (370)
Q Consensus 190 G~~~~l~a~~~~a~~~v~~~~~~~~------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---~-----~-~~~~ 254 (370)
|.++++.+.++.+++.+..|+..++ ..++.....+....+.+.++|.+++.|....... . . .+..
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 6789999999999999999998777 2388999999999999999999888776421110 0 0 2233
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHhc
Q 017528 255 LLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVLW 328 (370)
Q Consensus 255 ~~~l~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~ 328 (370)
+..++..|++ ........+..+++++|...++...+..+...+++++++||+++..+++|.++.++|.++|+|
T Consensus 81 ~~~~~~~~~~-~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy 153 (153)
T PF03151_consen 81 IFLLILSGLL-AFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY 153 (153)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence 4555555553 556667788999999999999999999999999999999999999999999999999998864
No 43
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.15 E-value=1.9e-09 Score=99.15 Aligned_cols=136 Identities=13% Similarity=0.056 Sum_probs=112.7
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHH
Q 017528 10 QRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGITFS 89 (370)
Q Consensus 10 ~~~~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 89 (370)
..|.++.+++++.|+...+..|...++ .++..... ...++.+++.++...... ....++..+...+..|+++..+.
T Consensus 147 ~~G~ll~l~aa~~~a~~~v~~r~~~~~-~~~~~~~~-~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~l~lgv~~t~~~ 222 (293)
T PRK10532 147 LTGAALALGAGACWAIYILSGQRAGAE-HGPATVAI-GSLIAALIFVPIGALQAG--EALWHWSILPLGLAVAILSTALP 222 (293)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcc-CCchHHHH-HHHHHHHHHHHHHHHccC--cccCCHHHHHHHHHHHHHHHHHH
Confidence 458999999999999999999988775 78877654 445666666666554222 22234555666678888888999
Q ss_pred HHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhc
Q 017528 90 LDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFY 155 (370)
Q Consensus 90 ~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~ 155 (370)
+.+|++++++.+++.++++.++.|+++.+++++++||+++.. +++|..+.+.|++.....
T Consensus 223 ~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~------~~iG~~lIl~~~~~~~~~ 282 (293)
T PRK10532 223 YSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLI------QWLALGAIIAASMGSTLT 282 (293)
T ss_pred HHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999 999999999999998754
No 44
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.11 E-value=2.2e-09 Score=98.65 Aligned_cols=137 Identities=13% Similarity=0.065 Sum_probs=115.2
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHH
Q 017528 10 QRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGITFS 89 (370)
Q Consensus 10 ~~~~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 89 (370)
..|.++.+++++.|+...+..|...+ -++...+++++.++.+.+.++............+.+.|......++++....
T Consensus 149 ~~G~l~~l~a~~~~a~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~~ 226 (292)
T PRK11272 149 PWGAILILIASASWAFGSVWSSRLPL--PVGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIA 226 (292)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCC--CcchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHHH
Confidence 46999999999999999999998654 3455667788888888877776543222111235677888888899888899
Q ss_pred HHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhh
Q 017528 90 LDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAF 154 (370)
Q Consensus 90 ~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~ 154 (370)
+.+|++++++.+++.++.+..+.|+++++++++++||+++.. +++|..+.+.|+++...
T Consensus 227 ~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~------~iiG~~lIi~gv~~~~~ 285 (292)
T PRK11272 227 ISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPI------EWLALGVIVFAVVLVTL 285 (292)
T ss_pred HHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHH------HHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999 99999999999998765
No 45
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=99.10 E-value=3.4e-09 Score=99.54 Aligned_cols=137 Identities=12% Similarity=0.112 Sum_probs=105.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhCCCCh-HHHHHHHHHHHHHHHHHHHhhhhcccC----CCCCHHHHHHHHHHHHHH
Q 017528 11 RPYLTVILIQAIYAGMFLLSKAAFNGGMNN-FVFIFYRQAFATLFVAPISLAVEWKKA----PPLSFLTFCKIFFLSLIG 85 (370)
Q Consensus 11 ~~~l~~l~~~~~~~~~~~~~k~~~~~~~~~-~~~~~~r~~~~~l~l~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~ 85 (370)
.|.++++.+++.|+.+.++.|...+. +++ ...+++...++.+.+.+..+...+... ...+.. ....+..++.
T Consensus 189 lG~~l~l~aa~~wa~~~il~~~~~~~-~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~i~y~~i~- 265 (358)
T PLN00411 189 IGGALLTIQGIFVSVSFILQAHIMSE-YPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDIT-LITIVTMAII- 265 (358)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-cCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchH-HHHHHHHHHH-
Confidence 47889999999999999999988775 755 466667777776666555444332211 112222 2223344444
Q ss_pred HHHHHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhcc
Q 017528 86 ITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYN 156 (370)
Q Consensus 86 ~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~ 156 (370)
..+.+.+|++++++.+++.+++..++.|++++++++++++|+++.. +++|.++++.|+.++...+
T Consensus 266 t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~------~~iG~~LIl~Gv~l~~~~~ 330 (358)
T PLN00411 266 TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLG------CLIGGILITLGFYAVMWGK 330 (358)
T ss_pred HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHHHHHhhh
Confidence 3678889999999999999999999999999999999999999999 9999999999999988643
No 46
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.08 E-value=1.8e-09 Score=99.40 Aligned_cols=138 Identities=10% Similarity=0.083 Sum_probs=110.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccc--cccchhhHHHHHHHH
Q 017528 186 TWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDPHEWV--LGWNVRLLAVAYCGI 263 (370)
Q Consensus 186 ~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~g~ 263 (370)
+..+|.+++++++++|+...+..|.. .+. +|.+..++++.++.+...+......+ ..... ......+ .....+.
T Consensus 5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~~~-~~~~~~~~R~~~a~~~l~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~ 80 (296)
T PRK15430 5 QTRQGVLLALAAYFIWGIAPAYFKLI-YYV-PADEILTHRVIWSFFFMVVLMSICRQ-WSYLKTLIQTPQKI-FMLAVSA 80 (296)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHh-cCC-CHHHHHHHHHHHHHHHHHHHHHHHcc-HHHHHHHHcCHHHH-HHHHHHH
Confidence 44689999999999999999999764 455 57999999999998877776544322 11110 1112222 2333566
Q ss_pred HHHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHh
Q 017528 264 IVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVL 327 (370)
Q Consensus 264 ~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~ 327 (370)
+..+..+.++++++++.+++.++.+.++.|+++.++++++++|+++..+++|.++.++|+++..
T Consensus 81 ~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~ 144 (296)
T PRK15430 81 VLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL 144 (296)
T ss_pred HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence 6778889999999999999999999999999999999999999999999999999999999875
No 47
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.02 E-value=7.1e-09 Score=95.43 Aligned_cols=133 Identities=17% Similarity=0.223 Sum_probs=105.0
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHH
Q 017528 10 QRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGITFS 89 (370)
Q Consensus 10 ~~~~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 89 (370)
..|.++++.+++.|+...+..|...++ .++....+ ..+.+++.+...... ......++..+...+..++ ...+.
T Consensus 155 ~~G~~~~l~aa~~~A~~~v~~k~~~~~-~~~~~~~~---~~~~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~~~-~t~~~ 228 (295)
T PRK11689 155 PLSYGLAFIGAFIWAAYCNVTRKYARG-KNGITLFF---ILTALALWIKYFLSP-QPAMVFSLPAIIKLLLAAA-AMGFG 228 (295)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhccCC-CCchhHHH---HHHHHHHHHHHHHhc-CccccCCHHHHHHHHHHHH-HHHHH
Confidence 458899999999999999999998765 78776533 223333333222212 1122345667777777775 45889
Q ss_pred HHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhh
Q 017528 90 LDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAF 154 (370)
Q Consensus 90 ~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~ 154 (370)
+.+|++++++.+++.++.+.++.|+++.+++++++||+++.. +++|.++++.|+.+...
T Consensus 229 ~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~------~~iG~~lI~~gv~~~~~ 287 (295)
T PRK11689 229 YAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFS------FWQGVAMVTAGSLLCWL 287 (295)
T ss_pred HHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHhHHHHhh
Confidence 999999999999999999999999999999999999999999 99999999999988765
No 48
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.02 E-value=8.4e-09 Score=94.28 Aligned_cols=133 Identities=11% Similarity=0.027 Sum_probs=102.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHHHHH
Q 017528 191 CFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDPHEWVLGWNVRLLAVAYCGIIVTALTY 270 (370)
Q Consensus 191 ~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~ 270 (370)
..+.+++++++|..++..|+..++. ++ ...+....+.+...|....... ...+...+ ..++..+..+.+.....+
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~~-~~--~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~ 77 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADKE-PD--FLWWALLAHSVLLTPYGLWYLA-QVGWSRLP-ATFWLLLAISAVANMVYF 77 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCch-hH--HHHHHHHHHHHHHHHHHHHhcc-cCCCCCcc-hhhHHHHHHHHHHHHHHH
Confidence 4678999999999999999877763 32 3455556666666665544211 12233222 334444455556788889
Q ss_pred HHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHhc
Q 017528 271 YLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVLW 328 (370)
Q Consensus 271 ~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~ 328 (370)
.++++++++.+++.++++.++.|+++.+++++++||+++..+++|.++++.|+++...
T Consensus 78 ~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~ 135 (281)
T TIGR03340 78 LGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL 135 (281)
T ss_pred HHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999999998764
No 49
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.01 E-value=4.3e-09 Score=94.84 Aligned_cols=136 Identities=12% Similarity=0.179 Sum_probs=107.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhcCCC---cccccccchh-hHHHHHHHHH
Q 017528 189 KGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDP---HEWVLGWNVR-LLAVAYCGII 264 (370)
Q Consensus 189 ~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---~~~~~~~~~~-~~~l~~~g~~ 264 (370)
+|..+.++++++|+...+..|.. .+. +|.+..++++.++.+...+......... ..++.....+ +..+...|++
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~~-~~~-~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 79 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKLL-KPL-PATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL 79 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHh-ccC-CHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence 47899999999999999999974 455 6799999999999887766554432210 1111111122 3334455544
Q ss_pred HHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHh
Q 017528 265 VTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVL 327 (370)
Q Consensus 265 ~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~ 327 (370)
.+..+.+++.+++++++..++.+.++.|+++.++++++++|+++..+++|.++.++|+++..
T Consensus 80 -~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~ 141 (256)
T TIGR00688 80 -IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI 141 (256)
T ss_pred -HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 67888999999999999999999999999999999999999999999999999999988764
No 50
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=98.96 E-value=2.4e-08 Score=86.49 Aligned_cols=276 Identities=15% Similarity=0.132 Sum_probs=188.1
Q ss_pred HHHHHHHHHHHHhC-CCCh--HHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 017528 23 YAGMFLLSKAAFNG-GMNN--FVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGITFSLDLYGIALIY 99 (370)
Q Consensus 23 ~~~~~~~~k~~~~~-~~~~--~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~ 99 (370)
+=.+..+..+..+. |+.| +-+++.++++=..+.+.-+.. .+.+++..++|.+..+ +.+. .+...+-+-++.|
T Consensus 55 Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~~~-~~~k~r~iP~rtY~~l---a~~t-~gtmGLsn~SlgY 129 (367)
T KOG1582|consen 55 YLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQL-IQTKRRVIPWRTYVIL---AFLT-VGTMGLSNGSLGY 129 (367)
T ss_pred HHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEEEe-ecccceecchhHhhhh---Hhhh-hhccccCcCcccc
Confidence 44455555555543 4553 445565555443333332221 1222333455554443 3333 3444455678888
Q ss_pred cChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhccCCccccccccccccCCCCccccc
Q 017528 100 TSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHIFGHHNSQQIHG 179 (370)
Q Consensus 100 ~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (370)
.+-..-.++.+|--+=+.+.+.++-+.|.+.. +.++..+..+|+++....+. +.
T Consensus 130 LNYPtQviFKccKliPVmiggifIqGkRY~v~------d~~aA~lm~lGli~FTLADs-~~------------------- 183 (367)
T KOG1582|consen 130 LNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVH------DYIAAMLMSLGLIWFTLADS-QT------------------- 183 (367)
T ss_pred ccCcHHHHHHhhhhhhhhheeeeeccccccHH------HHHHHHHHHHHHHhhhhccc-cc-------------------
Confidence 87766667778877778888888888888888 99999999999999887432 11
Q ss_pred ccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-CchhHHHHHHHHHHHHHHHHHHHhcCCCccccc--ccchhhH
Q 017528 180 HVSSGKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYP-SKLLFTTLQCFLSSIQSFAIAIALERDPHEWVL--GWNVRLL 256 (370)
Q Consensus 180 ~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~--~~~~~~~ 256 (370)
+++....|+...-.|-++-|.-.-.+++..+..+ +..+..++....+.+.++......+.-...|.. ..+....
T Consensus 184 ---sPNF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~ty 260 (367)
T KOG1582|consen 184 ---SPNFNLIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTY 260 (367)
T ss_pred ---CCCcceeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHH
Confidence 3445567888888888888887778888777655 336777788888888777666555543333332 2223222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHhcCcch
Q 017528 257 AVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVLWGKSK 332 (370)
Q Consensus 257 ~l~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~~~ 332 (370)
..++.=.+.+.++.......++..++..+..+....--+++++++++|..++|....-|..+++.|+++..+.++.
T Consensus 261 Gy~~~~s~~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk~n 336 (367)
T KOG1582|consen 261 GYAFLFSLAGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSKRN 336 (367)
T ss_pred HHHHHHHHHhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccCCC
Confidence 3322223456677777777888899999999999999999999999999999999999999999999998877643
No 51
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=98.94 E-value=3.8e-08 Score=90.79 Aligned_cols=139 Identities=13% Similarity=0.173 Sum_probs=108.6
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhCC--CChHHHHHHHHHHHHHHHHHHHhhhhcc-----cCCCCCHHHHHHHHHHH
Q 017528 10 QRPYLTVILIQAIYAGMFLLSKAAFNGG--MNNFVFIFYRQAFATLFVAPISLAVEWK-----KAPPLSFLTFCKIFFLS 82 (370)
Q Consensus 10 ~~~~l~~l~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~r~~~~~l~l~~~~~~~~~~-----~~~~~~~~~~~~~~~~g 82 (370)
..|.++.+++++.|+...+..|...+++ .+.....++....+.+.+.......+.. .....+...|...+..|
T Consensus 142 ~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 221 (299)
T PRK11453 142 MLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLA 221 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHH
Confidence 3699999999999999999999876531 2223334444444444333332221221 11234677888889999
Q ss_pred HHHHHHHHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhh
Q 017528 83 LIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAF 154 (370)
Q Consensus 83 ~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~ 154 (370)
++.....+.+|++++++.++..++.+..+.|+++.+++++++||+++.. +++|..+.+.|+.+...
T Consensus 222 i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~------~~iG~~lI~~gv~l~~~ 287 (299)
T PRK11453 222 FVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGL------QFLGAVLIMAGLYINVF 287 (299)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHH------HHHHHHHHHHHHHHHhc
Confidence 9998999999999999999999999999999999999999999999999 99999999999998765
No 52
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.83 E-value=5.7e-08 Score=77.22 Aligned_cols=120 Identities=16% Similarity=0.091 Sum_probs=91.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHHH
Q 017528 189 KGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDPHEWVLGWNVRLLAVAYCGIIVTAL 268 (370)
Q Consensus 189 ~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~ 268 (370)
.|.++.+.+.++-+...++.|+-.++.++ ...... . ...+ .. . . .+ ...++.|++++++
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~-~~~~~~-~----~~~~-~~-~--~--------~p---~~~i~lgl~~~~l 60 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMSRLPL-LSHAWD-F----IAAL-LA-F--G--------LA---LRAVLLGLAGYAL 60 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhCCC-ccchhH-H----HHHH-HH-H--h--------cc---HHHHHHHHHHHHH
Confidence 36788899999999999999988877543 221111 0 0000 00 0 0 10 1245668889999
Q ss_pred HHHHHHHHHhccCceeEEeccchHHHHHHHHHHH--HhcccchhhhHHHHHHHHHHHHHHhcC
Q 017528 269 TYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVF--LLCEIITLGRILGGLLLIGGLYAVLWG 329 (370)
Q Consensus 269 ~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~--~~~e~~~~~~~iG~~li~~g~~l~~~~ 329 (370)
++.+|.+++++.+.+.+.++....++...+.++. ++||++++.+++|+++|++|+++....
T Consensus 61 a~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~ 123 (129)
T PRK02971 61 SMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLP 123 (129)
T ss_pred HHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccC
Confidence 9999999999999999999999998888888885 899999999999999999999998653
No 53
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=98.81 E-value=4.2e-08 Score=86.45 Aligned_cols=210 Identities=14% Similarity=0.051 Sum_probs=126.9
Q ss_pred hHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhccCCcccc-----ccccccccCCCCcccc
Q 017528 104 LAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRL-----LCHHHIFGHHNSQQIH 178 (370)
Q Consensus 104 ~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 178 (370)
......+..++++++.++...++|++.. ++++.++...|+......+ .+... ........+..+ +
T Consensus 6 a~~~~~s~~l~~v~l~~~~~~~~~~~~~------~i~~~~l~~~g~l~~~ls~-~q~~al~~l~~~~~~~~~~~~~---~ 75 (222)
T TIGR00803 6 IHIIFKQNNLVLIALGNLLAAGKQVTQL------KILSTALMTLGSLVASLGD-DQWFSLKLLKLGVAIVQMVQSS---A 75 (222)
T ss_pred chHHHHhcchHHHHHhcccccceeeehH------HHHHHHHHHHHHHHhHhhH-HHHHHHHHHHHhHeeeecCCCC---c
Confidence 3445567888888888888888888877 8888888888887544321 10000 000000000000 0
Q ss_pred cccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHH-HHHHHHHHHHHHHhcCCC-cccccccchhhH
Q 017528 179 GHVSSGKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQC-FLSSIQSFAIAIALERDP-HEWVLGWNVRLL 256 (370)
Q Consensus 179 ~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~ 256 (370)
.+. ...+...|....+.+.++-+...+++++..++.+........+. .++.+.........+.+. ..+... ..+.
T Consensus 76 ~~~-~~g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 152 (222)
T TIGR00803 76 KTL-MFGNPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFF--IGYP 152 (222)
T ss_pred ccc-ccccHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcc--cCCc
Confidence 000 22355678888888888888899999887766432111111111 222221121111111110 011100 0111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHH
Q 017528 257 AVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAV 326 (370)
Q Consensus 257 ~l~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~ 326 (370)
...+.-++..+.+..+..+.+|+.++...+....++++++.+++++++||+++..+++|+.+++.|+.++
T Consensus 153 ~~~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY 222 (222)
T TIGR00803 153 TAVWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY 222 (222)
T ss_pred hHHHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence 1111222346677788999999999999999999999999999999999999999999999999987653
No 54
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=98.79 E-value=3.4e-08 Score=91.23 Aligned_cols=140 Identities=11% Similarity=0.140 Sum_probs=107.9
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHHHHHHHHhhhhcccCCC---------CCHHH-HHH
Q 017528 9 KQRPYLTVILIQAIYAGMFLLSKAAFNG-GMNNFVFIFYRQAFATLFVAPISLAVEWKKAPP---------LSFLT-FCK 77 (370)
Q Consensus 9 ~~~~~l~~l~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~---------~~~~~-~~~ 77 (370)
+..|.++.+++++.|+...+..|...++ ++++...+++....+.++++|+....+...... ..... +..
T Consensus 143 ~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (302)
T TIGR00817 143 NWAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTV 222 (302)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHH
Confidence 3469999999999999999999988761 399999999999999999988876533211000 00011 111
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhh
Q 017528 78 IFFLSLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAF 154 (370)
Q Consensus 78 ~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~ 154 (370)
.+..+.......+.+++.+++++++..+++...+.|+++.++++++++|+++.. +++|..+++.|+.+...
T Consensus 223 ~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~------~~~G~~lil~Gv~l~~~ 293 (302)
T TIGR00817 223 SLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQ------QVFGTGIAIAGVFLYSR 293 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchh------HHHHHHHHHHHHHHHHH
Confidence 223333232344467778999999999999999999999999999999999999 99999999999998764
No 55
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=98.78 E-value=1.7e-09 Score=92.34 Aligned_cols=279 Identities=15% Similarity=0.121 Sum_probs=189.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHHH
Q 017528 11 RPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGITFSL 90 (370)
Q Consensus 11 ~~~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 90 (370)
..++.+++-++.||+.+.+.... |-+|-+.+.--.+.+.++.+.+.++ ..|..+.+.+...++.|.+. ..++
T Consensus 2 ~~~liaL~P~l~WGsip~v~~k~---GG~p~qQ~lGtT~GALifaiiv~~~----~~p~~T~~~~iv~~isG~~W-s~GQ 73 (288)
T COG4975 2 MDLLIALLPALGWGSIPLVANKF---GGKPYQQTLGTTLGALIFAIIVFLF----VSPELTLTIFIVGFISGAFW-SFGQ 73 (288)
T ss_pred hhHHHHHHHHHHhcccceeeeec---CCChhHhhhhccHHHHHHHHHHhee----ecCccchhhHHHHHHhhhHh-hhhh
Confidence 35788899999999988776544 5667776655554555554444443 34456778888889999888 8999
Q ss_pred HHHHHHHhhcChhhHhhhc-cchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhccCCccccccccccc
Q 017528 91 DLYGIALIYTSATLAAATT-NCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHIF 169 (370)
Q Consensus 91 ~~~~~al~~~~~~~~~~i~-~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~~~~~~~~~ 169 (370)
...+.|+++.+++.+.++. ...-+-+.+++.+++||--+..+. ....+++++.++|+.+-...+.++.
T Consensus 74 ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~--IlG~iAliliviG~~lTs~~~~~nk--------- 142 (288)
T COG4975 74 ANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQI--ILGFIALILIVIGIYLTSKQDRNNK--------- 142 (288)
T ss_pred hhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhH--HHHHHHHHHHHHhheEeeeeccccc---------
Confidence 9999999999999999998 788888999999999987666510 0134566777788877665322110
Q ss_pred cCCCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhcCCCccccc
Q 017528 170 GHHNSQQIHGHVSSGKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDPHEWVL 249 (370)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 249 (370)
++++..+..+|....+.+.+.|-.|.+..+...-+. .....-+.....+..+.+. ..+.+.
T Consensus 143 ----------~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f~v~g---~saiLPqAiGMv~~ali~~-~~~~~~----- 203 (288)
T COG4975 143 ----------EEENPSNLKKGIVILLISTLGYVGYVVLFQLFDVDG---LSAILPQAIGMVIGALILG-FFKMEK----- 203 (288)
T ss_pred ----------cccChHhhhhheeeeeeeccceeeeEeeeccccccc---hhhhhHHHHHHHHHHHHHh-hccccc-----
Confidence 001455677899999999999999999876654221 2222222222222222222 222111
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhH----HHHHHHHHHHHH
Q 017528 250 GWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRI----LGGLLLIGGLYA 325 (370)
Q Consensus 250 ~~~~~~~~l~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~----iG~~li~~g~~l 325 (370)
...+..+.-+..|+ .-+++..++..+.++.+..+.=.+.-+..+++.+-+.++++|+=|..++ +|.+++++|.++
T Consensus 204 ~~~K~t~~nii~G~-~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~ 282 (288)
T COG4975 204 RFNKYTWLNIIPGL-IWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAIL 282 (288)
T ss_pred chHHHHHHHHhhHH-HHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhh
Confidence 11122222334454 4667778888888888888888888899999999999999999887664 578888888776
Q ss_pred Hhc
Q 017528 326 VLW 328 (370)
Q Consensus 326 ~~~ 328 (370)
...
T Consensus 283 lg~ 285 (288)
T COG4975 283 LGI 285 (288)
T ss_pred hhe
Confidence 543
No 56
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.77 E-value=3.5e-08 Score=77.14 Aligned_cols=106 Identities=19% Similarity=0.256 Sum_probs=79.9
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHH
Q 017528 224 LQCFLSSIQSFAIAIALERDPHEWVLGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFL 303 (370)
Q Consensus 224 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~ 303 (370)
+...++.+..........+..+.++....+.+...+..|++....++.++.++.++.++ .++.+..++|+++.++++++
T Consensus 3 ~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~ 81 (113)
T PF13536_consen 3 FRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLF 81 (113)
T ss_pred HHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHH
Confidence 44555666555555443322111222222445566666777667899999999999995 88899999999999999999
Q ss_pred hcccchhhhHHHHHHHHHHHHHHhcCc
Q 017528 304 LCEIITLGRILGGLLLIGGLYAVLWGK 330 (370)
Q Consensus 304 ~~e~~~~~~~iG~~li~~g~~l~~~~~ 330 (370)
++|+++..+++|.+++++|+++..+.+
T Consensus 82 ~~er~~~~~~~a~~l~~~Gv~li~~~~ 108 (113)
T PF13536_consen 82 FKERLSPRRWLAILLILIGVILIAWSD 108 (113)
T ss_pred hcCCCCHHHHHHHHHHHHHHHHHhhhh
Confidence 999999999999999999999987754
No 57
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=98.69 E-value=6.2e-07 Score=74.03 Aligned_cols=133 Identities=13% Similarity=0.180 Sum_probs=113.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhC------CCChHHHHHHHHHHHHHHHHHHHhhhhcccCCC----C-------CHHH
Q 017528 12 PYLTVILIQAIYAGMFLLSKAAFNG------GMNNFVFIFYRQAFATLFVAPISLAVEWKKAPP----L-------SFLT 74 (370)
Q Consensus 12 ~~l~~l~~~~~~~~~~~~~k~~~~~------~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~----~-------~~~~ 74 (370)
|.++++.+.++.+...+..|...++ +.++.++..+....+.+++.+.....+.....+ . +.+.
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 5678899999999999999987765 689999999999999999999887755443110 0 2344
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhh
Q 017528 75 FCKIFFLSLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAAT 151 (370)
Q Consensus 75 ~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~l 151 (370)
+...+..|+++ ...+...+..++++++...+++.....+++.++++++++|+++.. ++.|+.+++.|+++
T Consensus 81 ~~~~~~~~~~~-~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~------~~~G~~l~~~G~~~ 150 (153)
T PF03151_consen 81 IFLLILSGLLA-FLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPL------QIIGIVLALVGVLL 150 (153)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHH------HHHHHHHHHHHHhe
Confidence 66667777777 788889999999999999999999999999999999999999999 99999999999875
No 58
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.68 E-value=1.1e-07 Score=84.81 Aligned_cols=272 Identities=13% Similarity=0.149 Sum_probs=163.1
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHH
Q 017528 8 DKQRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGIT 87 (370)
Q Consensus 8 ~~~~~~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 87 (370)
+...|.++++.+.+..|....+-|....+ ... .. .|.......+- .-+.+..|++.+.
T Consensus 18 d~~~G~~LaissS~~Ig~sfilkKkgl~r-~~~---~~---------------~ra~~gg~~yl---~~~~Ww~G~ltm~ 75 (335)
T KOG2922|consen 18 DNIIGLVLAISSSIFIGSSFILKKKGLKR-AGA---SG---------------LRAGEGGYGYL---KEPLWWAGMLTMI 75 (335)
T ss_pred CceeeeeehhhccEEEeeehhhhHHHHHH-Hhh---hc---------------ccccCCCcchh---hhHHHHHHHHHHH
Confidence 45678899999999999999999987665 111 00 00111111111 2244556776667
Q ss_pred HHHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhccCCccccccccc
Q 017528 88 FSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHH 167 (370)
Q Consensus 88 ~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~~~~~~~ 167 (370)
.+...-|.|..+.|++.++++-++..++.++++..+++||++.. ..+|..++++|-.++.. ..|+.....+.+
T Consensus 76 vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~------g~lGc~l~v~Gst~iV~-haP~e~~i~t~~ 148 (335)
T KOG2922|consen 76 VGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLL------GILGCVLCVVGSTTIVI-HAPKEQEIESVE 148 (335)
T ss_pred HHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHh------hhhheeEEecccEEEEE-ecCcccccccHH
Confidence 77777789999999999999999999999999999999999999 99999999999877775 344332222221
Q ss_pred cccCCCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCC--CchhHHHHHHHHHHH-------HHHHHHH
Q 017528 168 IFGHHNSQQIHGHVSSGKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYP--SKLLFTTLQCFLSSI-------QSFAIAI 238 (370)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~--~~~~~~~~~~~~~~i-------~~~~~~~ 238 (370)
+..+.. ...+.++-. .+.--+..++.-...+++. +++.........++. +...+-.
T Consensus 149 el~~~~-------------~~~~Fliy~--~~iil~~~il~~~~~p~~g~tnilvyi~i~s~iGS~tV~svKalg~aikl 213 (335)
T KOG2922|consen 149 EVWELA-------------TEPGFLVYV--IIIILIVLILIFFYAPRYGQTNILVYIGICSLIGSLTVMSVKALGIAIKL 213 (335)
T ss_pred HHHHHh-------------cCccHHHHH--HHHHHHHHHHheeecccccccceeehhhHhhhhcceeeeeHHHHHHHHHH
Confidence 111100 011211111 1111111111111122221 334443333333321 1111111
Q ss_pred HhcCCCcccccccchhhHHHHHHHHHHHHHHHHHHHHHHhccCceeEEeccch-HHHHHHHHHHHHhcccc--h----hh
Q 017528 239 ALERDPHEWVLGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPL-ALIFTTIASVFLLCEII--T----LG 311 (370)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~-~pi~~~~~~~~~~~e~~--~----~~ 311 (370)
...++.+ .. .+..|..++.+.. +........++|++..+++.++++.+. -..++++.+.++|+|-- + ..
T Consensus 214 t~~g~~q-l~--~~~ty~~~l~~~~-~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~ 289 (335)
T KOG2922|consen 214 TFSGNNQ-LF--YPLTWIFLLVVAT-CVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIAG 289 (335)
T ss_pred HhcCCcc-cc--cHHHHHHHHHHHH-HHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHH
Confidence 2222211 11 2234555555444 566777888999999999999988665 56777777888888743 2 34
Q ss_pred hHHHHHHHHHHHHHHh
Q 017528 312 RILGGLLLIGGLYAVL 327 (370)
Q Consensus 312 ~~iG~~li~~g~~l~~ 327 (370)
...|+..++.|+++..
T Consensus 290 ~~~Gf~ti~~G~flL~ 305 (335)
T KOG2922|consen 290 ELCGFVTIFLGIFLLH 305 (335)
T ss_pred HHHhHHHhhheeeEee
Confidence 5678888899988874
No 59
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.67 E-value=4.9e-07 Score=70.12 Aligned_cols=69 Identities=20% Similarity=0.210 Sum_probs=63.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhh
Q 017528 79 FFLSLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLA 153 (370)
Q Consensus 79 ~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~ 153 (370)
...+++++.+.+.++..++++.|.+.+..+.++.++++.+++++++|||++.+ +++|+.+++.|++++.
T Consensus 40 ~~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~------~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 40 LGLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPR------HWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHHh
Confidence 34444666889999999999999999999999999999999999999999999 9999999999998875
No 60
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=98.59 E-value=1.9e-06 Score=78.65 Aligned_cols=134 Identities=19% Similarity=0.186 Sum_probs=107.9
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHH-HHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHH
Q 017528 10 QRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIF-YRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGITF 88 (370)
Q Consensus 10 ~~~~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~-~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 88 (370)
..|.++.+++++.|+...+..|... + .++..... +..........+... .... ...+.+.+......|+++...
T Consensus 153 ~~g~~~~l~a~~~~a~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~g~~~~~i 227 (292)
T COG0697 153 LLGLLLALAAALLWALYTALVKRLS-R-LGPVTLALLLQLLLALLLLLLFFL--SGFG-APILSRAWLLLLYLGVFSTGL 227 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc-C-CChHHHHHHHHHHHHHHHHHHHHh--cccc-ccCCHHHHHHHHHHHHHHHHH
Confidence 4799999999999999999999776 4 67766666 444422222222222 1111 345678889999999998678
Q ss_pred HHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhh
Q 017528 89 SLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAF 154 (370)
Q Consensus 89 ~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~ 154 (370)
.+.++++++++.+++.++++..+.|++..++++++++|+++.. +++|+.+.+.|+.+...
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~------~~~G~~li~~g~~l~~~ 287 (292)
T COG0697 228 AYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPA------QLLGAALVVLGVLLASL 287 (292)
T ss_pred HHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999 99999999999998764
No 61
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=98.58 E-value=8e-07 Score=81.48 Aligned_cols=129 Identities=15% Similarity=0.138 Sum_probs=103.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHH----HHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHH
Q 017528 10 QRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQA----FATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIG 85 (370)
Q Consensus 10 ~~~~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~----~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 85 (370)
.+|+++.+++++.++.+....|.. +.+|...++.... .+.+++.+. ++.++ .+.+..+..++.|++.
T Consensus 151 ~~Gi~~~l~sg~~y~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~-----~~~~~-~~~~~~~~~~~~Gi~~ 221 (290)
T TIGR00776 151 KKGILLLLMSTIGYLVYVVVAKAF---GVDGLSVLLPQAIGMVIGGIIFNLGH-----ILAKP-LKKYAILLNILPGLMW 221 (290)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHc---CCCcceehhHHHHHHHHHHHHHHHHH-----hcccc-hHHHHHHHHHHHHHHH
Confidence 679999999999999999999965 3888888666655 333333332 11122 2344455556688885
Q ss_pred HHHHHHHHHHHHh-hcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchh----hhHHHHHhhhhhhhh
Q 017528 86 ITFSLDLYGIALI-YTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKL----VGILICIGGAATLAF 154 (370)
Q Consensus 86 ~~~~~~~~~~al~-~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~----~~i~l~~~Gv~li~~ 154 (370)
...+.+|+.+.+ +.+++.+.++.+..|+...+++++++||+.+++ ++ +|.++.+.|+.++..
T Consensus 222 -~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~------~~~~~~iG~~lIi~~~~l~~~ 288 (290)
T TIGR00776 222 -GIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKR------EMIAISVGIILIIIAANILGI 288 (290)
T ss_pred -HHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcc------eeehhHHHHHHHHHHHHHHhc
Confidence 899999999999 999999999999999999999999999999999 99 999999999988753
No 62
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=98.57 E-value=1.8e-06 Score=81.33 Aligned_cols=138 Identities=13% Similarity=0.081 Sum_probs=101.2
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhC------CCChHHHHHHHHHHHHHHHHHHHhhhhcccC--------CCCCH---
Q 017528 10 QRPYLTVILIQAIYAGMFLLSKAAFNG------GMNNFVFIFYRQAFATLFVAPISLAVEWKKA--------PPLSF--- 72 (370)
Q Consensus 10 ~~~~l~~l~~~~~~~~~~~~~k~~~~~------~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~--------~~~~~--- 72 (370)
..|.++++++++.|+...+..|...++ +.++.....+...++.++++|+....+.... ...+.
T Consensus 193 ~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~ 272 (350)
T PTZ00343 193 WLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTK 272 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccch
Confidence 469999999999999999999998764 1567777777788888888888764322110 00011
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhh
Q 017528 73 LTFCKIFFLSLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATL 152 (370)
Q Consensus 73 ~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li 152 (370)
.......+.+.+...+.+.+.+.+++++++...++...+.|+++.+++++++||+++.. +++|.++++.|+.+-
T Consensus 273 ~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~------~~iG~~lii~Gv~lY 346 (350)
T PTZ00343 273 GIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLL------GYLGMAVAILGALLY 346 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchH------hHHHHHHHHHHHHHH
Confidence 11111122222222333444446999999999999999999999999999999999999 999999999999875
Q ss_pred h
Q 017528 153 A 153 (370)
Q Consensus 153 ~ 153 (370)
.
T Consensus 347 s 347 (350)
T PTZ00343 347 S 347 (350)
T ss_pred h
Confidence 4
No 63
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=98.54 E-value=9.1e-07 Score=78.20 Aligned_cols=140 Identities=14% Similarity=0.160 Sum_probs=114.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccc-cccchhhHHHHHHHHHHH
Q 017528 188 IKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDPHEWV-LGWNVRLLAVAYCGIIVT 266 (370)
Q Consensus 188 ~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~g~~~~ 266 (370)
..|+++++.|-+.|+..-.+.|-. +.. ++.++..++.+.+......+.........-+. ...++.+...+..+++ -
T Consensus 6 ~~Gil~~l~Ay~lwG~lp~y~kll-~~~-~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~l-i 82 (293)
T COG2962 6 RKGILLALLAYLLWGLLPLYFKLL-EPL-PATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALL-I 82 (293)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHH-ccC-CHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHH-H
Confidence 479999999999999988887765 444 45899999999999888776655543222121 2345566666666665 5
Q ss_pred HHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHhcCc
Q 017528 267 ALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVLWGK 330 (370)
Q Consensus 267 ~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~ 330 (370)
....+.|.++..+.....+|.-.+++|++.+++|.++++|+++..|++..++..+|+....|..
T Consensus 83 ~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~ 146 (293)
T COG2962 83 GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLL 146 (293)
T ss_pred HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc
Confidence 5788999999999999999999999999999999999999999999999999999999877644
No 64
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.46 E-value=4.2e-06 Score=66.57 Aligned_cols=119 Identities=19% Similarity=0.141 Sum_probs=91.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHHH
Q 017528 11 RPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGITFSL 90 (370)
Q Consensus 11 ~~~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 90 (370)
+++++++++.++-+..-++.|...++ .+....... . ...+ . .. .+ ....+..|+..+.+++
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~~-~g~~~~~~~-~-~~~~---~-~~---------~~---p~~~i~lgl~~~~la~ 62 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMSR-LPLLSHAWD-F-IAAL---L-AF---------GL---ALRAVLLGLAGYALSM 62 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhh-CCCccchhH-H-HHHH---H-HH---------hc---cHHHHHHHHHHHHHHH
Confidence 47888899999989999999998875 544332211 0 0000 0 00 00 1124667777778999
Q ss_pred HHHHHHHhhcChhhHhhhccchhHHHHHHHHH--HhhccccccccCccchhhhHHHHHhhhhhhhh
Q 017528 91 DLYGIALIYTSATLAAATTNCLPAITFFLAVL--LRMEVLKLKTVPGVAKLVGILICIGGAATLAF 154 (370)
Q Consensus 91 ~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l--~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~ 154 (370)
.+|.+++++.+++.+.++.+..+.++.+.++. ++||+++.. +++|+.++++|++++..
T Consensus 63 ~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~------~~iGi~lIi~GV~lv~~ 122 (129)
T PRK02971 63 LCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLK------KTLGVACIMLGVWLINL 122 (129)
T ss_pred HHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999889888885 899999999 99999999999999874
No 65
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.44 E-value=1.1e-06 Score=68.21 Aligned_cols=67 Identities=19% Similarity=0.208 Sum_probs=61.7
Q ss_pred HHHHHHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHh
Q 017528 261 CGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVL 327 (370)
Q Consensus 261 ~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~ 327 (370)
.++++.+.++.++..++++.+.+.+-.+.++.++.+.+++++++||++++.+++|.+++++|+++..
T Consensus 42 ~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 42 LALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 3445678899999999999999999999999999999999999999999999999999999998764
No 66
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=98.40 E-value=4.7e-06 Score=71.95 Aligned_cols=137 Identities=18% Similarity=0.095 Sum_probs=117.6
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHH
Q 017528 9 KQRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGITF 88 (370)
Q Consensus 9 ~~~~~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 88 (370)
.-.|..+++.+..+|+.+.+..|...+. .+...-+..-+.++.++.+|+-.... ...-.++......+..+++...+
T Consensus 146 Dp~Gv~~Al~AG~~Wa~YIv~G~r~g~~-~~g~~g~a~gm~vAaviv~Pig~~~a--g~~l~~p~ll~laLgvavlSSal 222 (292)
T COG5006 146 DPVGVALALGAGACWALYIVLGQRAGRA-EHGTAGVAVGMLVAALIVLPIGAAQA--GPALFSPSLLPLALGVAVLSSAL 222 (292)
T ss_pred CHHHHHHHHHHhHHHHHHHHHcchhccc-CCCchHHHHHHHHHHHHHhhhhhhhc--chhhcChHHHHHHHHHHHHhccc
Confidence 3468999999999999999999988765 66677778889999999999876422 22234577788889999999999
Q ss_pred HHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhh
Q 017528 89 SLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAF 154 (370)
Q Consensus 89 ~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~ 154 (370)
.+.+-..+++..|...-+.+.++.|.+.++.+++++||+++.. ||.++...+.+.+-...
T Consensus 223 PYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~------qwlaI~~ViaAsaG~~l 282 (292)
T COG5006 223 PYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLI------QWLAIAAVIAASAGSTL 282 (292)
T ss_pred chHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHH------HHHHHHHHHHHHhcccc
Confidence 9999999999999999999999999999999999999999999 99999988887764443
No 67
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=98.32 E-value=1.5e-05 Score=73.72 Aligned_cols=140 Identities=11% Similarity=0.043 Sum_probs=111.9
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhhcccCCCC--CHHHHHHHHHHHHHH
Q 017528 8 DKQRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKKAPPL--SFLTFCKIFFLSLIG 85 (370)
Q Consensus 8 ~~~~~~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~ 85 (370)
+..+|.++++.+++++|.+++..+...++ .++.++..+-.+++.++..+.....++....+. +++.....+..+ +.
T Consensus 165 ~~i~GDll~l~~a~lya~~nV~~E~~v~~-~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~~~~~~~v~~~-~~ 242 (334)
T PF06027_consen 165 NPILGDLLALLGAILYAVSNVLEEKLVKK-APRVEFLGMLGLFGFIISGIQLAILERSGIESIHWTSQVIGLLVGYA-LC 242 (334)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHhccc-CCHHHHHHHHHHHHHHHHHHHHHheehhhhhccCCChhhHHHHHHHH-HH
Confidence 55789999999999999999999999986 899999988888998888877766565554443 333333333333 33
Q ss_pred HHHHHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhc
Q 017528 86 ITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFY 155 (370)
Q Consensus 86 ~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~ 155 (370)
....+.+.-..++++++....+-.-+..+++.+++.+++|+++++. .++|.+++++|.++....
T Consensus 243 lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~l------y~~af~lIiiG~vvy~~~ 306 (334)
T PF06027_consen 243 LFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWL------YILAFALIIIGFVVYNLA 306 (334)
T ss_pred HHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHH------HHHHHHHHHHHhheEEcc
Confidence 3556667778889999988888778899999999999999999999 999999999999998753
No 68
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=98.06 E-value=0.0017 Score=59.28 Aligned_cols=300 Identities=15% Similarity=0.130 Sum_probs=179.4
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhh-ccc----CCCCCHHHHHHHHHHHH
Q 017528 9 KQRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVE-WKK----APPLSFLTFCKIFFLSL 83 (370)
Q Consensus 9 ~~~~~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~-~~~----~~~~~~~~~~~~~~~g~ 83 (370)
-..|+++..++.+.-|+.++-.|...+ .+-...=....+++.++ .|+..... -++ ....+...+....+.|+
T Consensus 5 ii~Gii~h~iGg~~~~sfy~P~kkvk~--WsWEs~Wlv~gi~swli-~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G~ 81 (344)
T PF06379_consen 5 IILGIIFHAIGGFASGSFYVPFKKVKG--WSWESYWLVQGIFSWLI-VPWLWALLAIPDFFSIYSATPASTLFWTFLFGV 81 (344)
T ss_pred HHHHHHHHHHHHHHhhhhccchhhcCC--ccHHHHHHHHHHHHHHH-HHHHHHHHhCCcHHHHHHhCChhHHHHHHHHHH
Confidence 357899999999999999999997644 45444333344444333 33332211 111 13345677888899999
Q ss_pred HHHHHHHHHHHHHHhhcChhhHhhhc-cchhHHHHHHHHHHhhccc-cccccCccchhhhHHHHHhhhhhhhhccCCccc
Q 017528 84 IGITFSLDLYGIALIYTSATLAAATT-NCLPAITFFLAVLLRMEVL-KLKTVPGVAKLVGILICIGGAATLAFYNGPQLR 161 (370)
Q Consensus 84 ~~~~~~~~~~~~al~~~~~~~~~~i~-~~~pi~~~ll~~l~~~e~~-~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~ 161 (370)
+. ..+...|-.+++|+..+...-+. .+..++-.++-.++.++-- -..++-+...++|++++++|+.++......+++
T Consensus 82 lW-GIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~Ke~ 160 (344)
T PF06379_consen 82 LW-GIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSMKEK 160 (344)
T ss_pred HH-hcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHhhhh
Confidence 98 88888999999999998887655 7777777777666654210 122344556899999999999998863211111
Q ss_pred cccccccccCCCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHh-------hcCCCchh----HHHHHHHHHH
Q 017528 162 LLCHHHIFGHHNSQQIHGHVSSGKTWIKGCFIMLSSNTSFGLWLVLQGFVM-------KSYPSKLL----FTTLQCFLSS 230 (370)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~-------~~~~~~~~----~~~~~~~~~~ 230 (370)
..+ . +. ++.+..+|.++++++++..|.+++-...-. +...+|.. .....+..+.
T Consensus 161 ~~~-~-------------~~-~efn~~kGl~iAv~sGv~Sa~fn~g~~ag~pi~~~a~a~G~~~l~~~l~~~vvv~~GGf 225 (344)
T PF06379_consen 161 ELG-E-------------EA-KEFNFKKGLIIAVLSGVMSACFNFGLDAGKPIHEAAVAAGVNPLYANLPVYVVVLWGGF 225 (344)
T ss_pred hhc-c-------------ch-hhhhhhhhHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHcCCCcHHHhCchhhhhhhhHH
Confidence 100 0 00 456778999999999999999887764321 11112221 2222333344
Q ss_pred HHHHHHHHHhc---CCC---cccccccc---hhhHHHHHHHHHHHHHHHHHHHHHHhccCce--eE--EeccchHHHHHH
Q 017528 231 IQSFAIAIALE---RDP---HEWVLGWN---VRLLAVAYCGIIVTALTYYLQAWVIEKKGPV--FL--AMSTPLALIFTT 297 (370)
Q Consensus 231 i~~~~~~~~~~---~~~---~~~~~~~~---~~~~~l~~~g~~~~~~~~~~~~~a~~~~~~~--~~--s~~~~~~pi~~~ 297 (370)
+.-+..+++.. ++. .+.....+ ..+...+..|+ .=..++.+|..+-.+.+.. .+ .+.+.+..+++-
T Consensus 226 ~tN~~yc~~~l~~~k~~s~~~d~~~~~~~~~~N~~~~aLaG~-lWy~qfffYg~G~s~lg~~~~~~sW~i~ma~~vl~sn 304 (344)
T PF06379_consen 226 ITNLIYCLILLAKNKNWSWKGDYSVAKPPLLKNYLFCALAGV-LWYSQFFFYGMGESKLGASGPFSSWAIHMALIVLFSN 304 (344)
T ss_pred HHHHHHHHHHHhhcCCCccccccccccchhHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcCccccHHHHHHHHHHHHHHH
Confidence 44444444431 111 12211111 22333333333 2345566666676666644 22 345677788888
Q ss_pred HHHHHHhcc------cchhhhHHHHHHHHHHHHHHhcC
Q 017528 298 IASVFLLCE------IITLGRILGGLLLIGGLYAVLWG 329 (370)
Q Consensus 298 ~~~~~~~~e------~~~~~~~iG~~li~~g~~l~~~~ 329 (370)
+++.+. +| +.-...++|+++++.+++++-+.
T Consensus 305 vwGl~l-kEWKg~s~kt~~vl~~G~~vlI~s~~ivG~G 341 (344)
T PF06379_consen 305 VWGLIL-KEWKGASKKTIRVLVLGIAVLILSVVIVGYG 341 (344)
T ss_pred HHHHHH-HHhccCCcccHHHHHHHHHHHHHHHHHHhcc
Confidence 888754 43 34455678999999888876543
No 69
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=97.95 E-value=3.9e-06 Score=72.97 Aligned_cols=135 Identities=15% Similarity=0.108 Sum_probs=100.3
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHH
Q 017528 186 TWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDPHEWVLGWNVRLLAVAYCGIIV 265 (370)
Q Consensus 186 ~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~ 265 (370)
..++|..+..++ ..+....+..++..+. +|.......+.+-..+..|..++.... .+.....+.|. +.=|+ .
T Consensus 35 ~p~~gl~l~~vs-~ff~~~~vv~t~~~e~--~p~e~a~~r~l~~mlit~pcliy~~~~--v~gp~g~R~~L--iLRg~-m 106 (346)
T KOG4510|consen 35 KPNLGLLLLTVS-YFFNSCMVVSTKVLEN--DPMELASFRLLVRMLITYPCLIYYMQP--VIGPEGKRKWL--ILRGF-M 106 (346)
T ss_pred CCccCceehhhH-HHHhhHHHhhhhhhcc--ChhHhhhhhhhhehhhhheEEEEEeee--eecCCCcEEEE--Eeehh-h
Confidence 346788888888 7777778887777665 567777777666666666654332221 11222222232 33343 3
Q ss_pred HHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHhc
Q 017528 266 TALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVLW 328 (370)
Q Consensus 266 ~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~ 328 (370)
+..+..+.++++++.+-+.+.++...+|+++.+++|.+++|+.+..+.+|..+.+.|+++..+
T Consensus 107 G~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvR 169 (346)
T KOG4510|consen 107 GFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVR 169 (346)
T ss_pred hhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEec
Confidence 557788889999999999999999999999999999999999999999999999999998764
No 70
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=97.94 E-value=0.00015 Score=64.72 Aligned_cols=116 Identities=13% Similarity=0.017 Sum_probs=89.2
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHH
Q 017528 8 DKQRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGIT 87 (370)
Q Consensus 8 ~~~~~~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 87 (370)
+..++++.++.+++.+..+.++.|.. +.++....+-+...-.+....+.... .++...|..++-.+.|++. .
T Consensus 135 ~~~kgi~~Ll~stigy~~Y~~~~~~~---~~~~~~~~lPqaiGm~i~a~i~~~~~----~~~~~~k~~~~nil~G~~w-~ 206 (269)
T PF06800_consen 135 NMKKGILALLISTIGYWIYSVIPKAF---HVSGWSAFLPQAIGMLIGAFIFNLFS----KKPFFEKKSWKNILTGLIW-G 206 (269)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHhc---CCChhHhHHHHHHHHHHHHHHHhhcc----cccccccchHHhhHHHHHH-H
Confidence 34679999999999999999998874 48888777755444444333333332 1122234445567788887 8
Q ss_pred HHHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhcccccc
Q 017528 88 FSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLK 131 (370)
Q Consensus 88 ~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~ 131 (370)
.++.+++.+.+....+.+-.+.++.+++..+.+.+++||+-+++
T Consensus 207 ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~k 250 (269)
T PF06800_consen 207 IGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKK 250 (269)
T ss_pred HHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchh
Confidence 88899999999999999999999999999999999999998877
No 71
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=97.90 E-value=0.00017 Score=58.18 Aligned_cols=132 Identities=18% Similarity=0.160 Sum_probs=100.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHHHH
Q 017528 190 GCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDPHEWVLGWNVRLLAVAYCGIIVTALT 269 (370)
Q Consensus 190 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 269 (370)
..++++.++.+-++......++.++.++|...+++.+..+.+.+....++.++. +........|+.. .|.+..+..
T Consensus 2 ~~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~--~~~~~~~~p~w~~--lGG~lG~~~ 77 (138)
T PF04657_consen 2 YILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRP--SLASLSSVPWWAY--LGGLLGVFF 77 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhccc--ccchhccCChHHh--ccHHHHHHH
Confidence 367889999999999999999998887789999999999999998887776653 2221122233332 244456677
Q ss_pred HHHHHHHHhccCceeEEec-cchHHHHHHHHHHH----HhcccchhhhHHHHHHHHHHHHH
Q 017528 270 YYLQAWVIEKKGPVFLAMS-TPLALIFTTIASVF----LLCEIITLGRILGGLLLIGGLYA 325 (370)
Q Consensus 270 ~~~~~~a~~~~~~~~~s~~-~~~~pi~~~~~~~~----~~~e~~~~~~~iG~~li~~g~~l 325 (370)
..+.....++.+++....+ ..-+.+.+.++|.+ .-++++++.+++|.+++++|+++
T Consensus 78 V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 78 VLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 7788889999998777654 55577888888886 23577899999999999999864
No 72
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.85 E-value=5.3e-05 Score=59.16 Aligned_cols=67 Identities=22% Similarity=0.388 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHHHHHhccCceeEEec-cchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHhcC
Q 017528 263 IIVTALTYYLQAWVIEKKGPVFLAMS-TPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVLWG 329 (370)
Q Consensus 263 ~~~~~~~~~~~~~a~~~~~~~~~s~~-~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~ 329 (370)
+...+++++++..++++.+.+.+=.+ .-+..+.+.+.+++++||++++.+++|++++++|++.....
T Consensus 37 i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~ 104 (120)
T PRK10452 37 LVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSG 104 (120)
T ss_pred HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcC
Confidence 44567889999999999988776655 45788999999999999999999999999999999987543
No 73
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=97.75 E-value=0.00056 Score=63.20 Aligned_cols=137 Identities=15% Similarity=0.177 Sum_probs=111.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHHHHHHHHhh--hhccc-C---CCCCHHHHHHHHHHHHH
Q 017528 12 PYLTVILIQAIYAGMFLLSKAAFNG-GMNNFVFIFYRQAFATLFVAPISLA--VEWKK-A---PPLSFLTFCKIFFLSLI 84 (370)
Q Consensus 12 ~~l~~l~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~r~~~~~l~l~~~~~~--~~~~~-~---~~~~~~~~~~~~~~g~~ 84 (370)
|+++++++.++-|......+...++ +.++.+..++-..++.++..+.... .+... . ....+..+...+...++
T Consensus 155 G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~ 234 (303)
T PF08449_consen 155 GIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLT 234 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHH
Confidence 9999999999999999999988854 7889999999999999888877665 21110 0 01123456666677777
Q ss_pred HHHHHHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhc
Q 017528 85 GITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFY 155 (370)
Q Consensus 85 ~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~ 155 (370)
+ ..++.+.+.-.+..++...+++..+--+++.+++.++++++++.. +|.|+++.+.|..+=...
T Consensus 235 ~-~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~------~~~G~~lv~~g~~~~~~~ 298 (303)
T PF08449_consen 235 G-ALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPL------QWIGIVLVFAGIFLYSYA 298 (303)
T ss_pred H-HHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChH------HHHHHHHhHHHHHHHHHh
Confidence 7 667777788899999999999999999999999999999999999 999999999999886653
No 74
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=97.71 E-value=0.00072 Score=54.57 Aligned_cols=130 Identities=15% Similarity=0.138 Sum_probs=96.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCC-hHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 017528 13 YLTVILIQAIYAGMFLLSKAAFNGGMN-NFVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGITFSLD 91 (370)
Q Consensus 13 ~l~~l~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 91 (370)
+++.+++....+....+...+.++ .+ |...+++.+..+++.+..+....+++..+..+ +.-++...-|+++ +..-.
T Consensus 3 ~lla~~aG~~i~~q~~~N~~L~~~-~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~-~~p~w~~lGG~lG-~~~V~ 79 (138)
T PF04657_consen 3 ILLALLAGALIALQAAFNGQLGKA-LGSPLVASFISFGVGFILLLIILLITGRPSLASLS-SVPWWAYLGGLLG-VFFVL 79 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-hCccHHHHHHHHHHHHHHHHHHHHHhcccccchhc-cCChHHhccHHHH-HHHHH
Confidence 567778888888888888877776 65 99999999999999998888775554333332 2234445577887 77777
Q ss_pred HHHHHHhhcChhhHhhhc-cchhHHHHHHHHH----HhhccccccccCccchhhhHHHHHhhhhh
Q 017528 92 LYGIALIYTSATLAAATT-NCLPAITFFLAVL----LRMEVLKLKTVPGVAKLVGILICIGGAAT 151 (370)
Q Consensus 92 ~~~~al~~~~~~~~~~i~-~~~pi~~~ll~~l----~~~e~~~~~~~~~~~~~~~i~l~~~Gv~l 151 (370)
+..+.....+++.+..+. .-+-+...++.++ .-+++++.+ +.+|+.+.++|+.+
T Consensus 80 ~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~------r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 80 SNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLR------RILGLALMIAGVIL 138 (138)
T ss_pred HHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHH------HHHHHHHHHHHHhC
Confidence 888899999988888766 4455666666664 234666666 99999999999864
No 75
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=97.67 E-value=9.9e-05 Score=67.73 Aligned_cols=118 Identities=19% Similarity=0.185 Sum_probs=88.0
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-chhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHH
Q 017528 186 TWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPS-KLLFTTLQCFLSSIQSFAIAIALERDPHEWVLGWNVRLLAVAYCGII 264 (370)
Q Consensus 186 ~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 264 (370)
++..|..+++.++++.+....++|+...+.+. +..- .. ...+......|+. |.+
T Consensus 4 ~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~--------------------~~-~~~~~l~~~~W~~----G~~ 58 (300)
T PF05653_consen 4 DFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRA--------------------GS-GGRSYLRRPLWWI----GLL 58 (300)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc--------------------cc-hhhHHHhhHHHHH----HHH
Confidence 45689999999999999999999987665431 0000 00 0000001111222 333
Q ss_pred HHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHhc
Q 017528 265 VTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVLW 328 (370)
Q Consensus 265 ~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~ 328 (370)
..+++..+...++...+++.++++..+..++..+++.+++||+++..+++|+++++.|..+...
T Consensus 59 ~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~ 122 (300)
T PF05653_consen 59 LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVI 122 (300)
T ss_pred HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEE
Confidence 4556677788899999999999999999999999999999999999999999999999987654
No 76
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.63 E-value=0.0002 Score=55.16 Aligned_cols=67 Identities=15% Similarity=0.213 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHHHHHhccCceeEEec-cchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHhcC
Q 017528 263 IIVTALTYYLQAWVIEKKGPVFLAMS-TPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVLWG 329 (370)
Q Consensus 263 ~~~~~~~~~~~~~a~~~~~~~~~s~~-~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~ 329 (370)
+...+++++++..++++.+.+.+=.+ .-+..+.+.+.++++|+|++++.+++|++++++|+++....
T Consensus 37 ~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~ 104 (110)
T PRK09541 37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL 104 (110)
T ss_pred HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 34567788888889988887666544 44688888999999999999999999999999999998543
No 77
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.62 E-value=0.00024 Score=55.48 Aligned_cols=68 Identities=24% Similarity=0.208 Sum_probs=61.3
Q ss_pred HHHHHHHHHHHHHHHHHhhcChhhHhhhc-cchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhh
Q 017528 81 LSLIGITFSLDLYGIALIYTSATLAAATT-NCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAF 154 (370)
Q Consensus 81 ~g~~~~~~~~~~~~~al~~~~~~~~~~i~-~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~ 154 (370)
..+.++..+++++..++++.|.+.+-.+. .+..+.+.+++.+++||+++.. +++|+.+.++|++.+-.
T Consensus 35 ~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~------~~~gi~lIi~GVi~l~l 103 (120)
T PRK10452 35 LMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLM------KIAGLTTLVAGIVLIKS 103 (120)
T ss_pred HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHhhc
Confidence 34455578999999999999999999886 7999999999999999999999 99999999999988864
No 78
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.57 E-value=0.00028 Score=53.27 Aligned_cols=67 Identities=28% Similarity=0.306 Sum_probs=59.9
Q ss_pred HHHHHHHHHHHHHHHHhhcChhhHhhhc-cchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhh
Q 017528 82 SLIGITFSLDLYGIALIYTSATLAAATT-NCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAF 154 (370)
Q Consensus 82 g~~~~~~~~~~~~~al~~~~~~~~~~i~-~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~ 154 (370)
.+.++.+++.+...++++.|.+.+-.+. ....+.+.+.++++++|+++.. +++++.+.+.|++.+-.
T Consensus 36 ~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~------~~~gl~LiiaGvi~Lk~ 103 (106)
T COG2076 36 TIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLI------KLLGLALILAGVIGLKL 103 (106)
T ss_pred HHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHH------HHHHHHHHHHHHHHhhh
Confidence 3444578889999999999999998777 8999999999999999999999 99999999999998754
No 79
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.57 E-value=0.00034 Score=53.88 Aligned_cols=67 Identities=18% Similarity=0.206 Sum_probs=60.3
Q ss_pred HHHHHHHHHHHHHHHHhhcChhhHhhhc-cchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhh
Q 017528 82 SLIGITFSLDLYGIALIYTSATLAAATT-NCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAF 154 (370)
Q Consensus 82 g~~~~~~~~~~~~~al~~~~~~~~~~i~-~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~ 154 (370)
.+.++.+++.++..++++.|.+.+-.+. .+..+.+.+++++++||+++.. +++|+.+.++|++.+-.
T Consensus 36 ~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~------~~~gi~lIi~GVi~l~l 103 (110)
T PRK09541 36 TIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLP------AIIGMMLICAGVLVINL 103 (110)
T ss_pred HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHHhc
Confidence 3455578888999999999999999885 7899999999999999999999 99999999999999864
No 80
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.57 E-value=0.0011 Score=53.61 Aligned_cols=137 Identities=15% Similarity=0.159 Sum_probs=94.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHH
Q 017528 188 IKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDPHEWVLGWNVRLLAVAYCGIIVTA 267 (370)
Q Consensus 188 ~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 267 (370)
....+.+++++.+..+..-...++.+..++|..-.++.+..+.+.+..+.++.+.. ..+.......|+.. +|.+..+
T Consensus 4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~-~~~a~~~~~pwW~~--~GG~lGa 80 (150)
T COG3238 4 YLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGH-PGLAAVASAPWWAW--IGGLLGA 80 (150)
T ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCC-CchhhccCCchHHH--Hccchhh
Confidence 35678889999999999999999999888889999999999998888887774432 22322222233322 2223333
Q ss_pred HHHHHHHHHHhccCce-eEEeccchHHHHHHHHHHHHhc----ccchhhhHHHHHHHHHHHHHHh
Q 017528 268 LTYYLQAWVIEKKGPV-FLAMSTPLALIFTTIASVFLLC----EIITLGRILGGLLLIGGLYAVL 327 (370)
Q Consensus 268 ~~~~~~~~a~~~~~~~-~~s~~~~~~pi~~~~~~~~~~~----e~~~~~~~iG~~li~~g~~l~~ 327 (370)
+-...-.....+.+++ .......-+.+.+.+++.+=+. .+++...++|.+++++|+++..
T Consensus 81 ~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~ 145 (150)
T COG3238 81 IFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLAR 145 (150)
T ss_pred hhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhc
Confidence 3333344555566554 3445566678888888876543 5689999999999999966553
No 81
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.51 E-value=0.0018 Score=49.76 Aligned_cols=64 Identities=17% Similarity=0.137 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHHHHHhhcChhhHhhhc-cchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhh
Q 017528 83 LIGITFSLDLYGIALIYTSATLAAATT-NCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATL 152 (370)
Q Consensus 83 ~~~~~~~~~~~~~al~~~~~~~~~~i~-~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li 152 (370)
+.++..++++...++++.|.+.+-.+. ....+.+.+.+.+++||+++.. +++++.+.+.|++.+
T Consensus 42 ~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~------~~~gi~lIi~GVi~l 106 (109)
T PRK10650 42 LAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRK------GWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHh
Confidence 344478888999999999999998877 7889999999999999999999 999999999999886
No 82
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=97.47 E-value=0.0004 Score=53.38 Aligned_cols=110 Identities=16% Similarity=0.166 Sum_probs=77.0
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017528 17 ILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGITFSLDLYGIA 96 (370)
Q Consensus 17 l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a 96 (370)
++..++||.++.+.|...+. .++..-.. |..-.... + .+.|.+ ...+...-.+...|++.
T Consensus 2 l~Vg~~WG~Tnpfik~g~~~-~~~~~~~~-~~~~~~~~-----L-----------l~n~~y--~ipf~lNq~GSv~f~~~ 61 (113)
T PF10639_consen 2 LLVGILWGCTNPFIKRGSSG-LEKVKASL-QLLQEIKF-----L-----------LLNPKY--IIPFLLNQSGSVLFFLL 61 (113)
T ss_pred eeehHHhcCchHHHHHHHhh-cCCccchH-HHHHHHHH-----H-----------HHhHHH--HHHHHHHHHHHHHHHHH
Confidence 35678999999999998874 55444331 21111111 0 011111 12333335677788999
Q ss_pred HhhcChhhHhhhc-cchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhh
Q 017528 97 LIYTSATLAAATT-NCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATL 152 (370)
Q Consensus 97 l~~~~~~~~~~i~-~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li 152 (370)
+...+.+.+.++. ++.=++|++.++++.+|..+++ .++|+.+.+.|+.+.
T Consensus 62 L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~------~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 62 LGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRR------TWLGMALILAGVALC 112 (113)
T ss_pred HhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchh------HHHHHHHHHcCeeee
Confidence 9999999999997 8888999999988877777777 999999999998764
No 83
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.46 E-value=0.00063 Score=51.89 Aligned_cols=66 Identities=15% Similarity=0.127 Sum_probs=59.4
Q ss_pred HHHHHHHHHHHHHHHhhcChhhHhhhc-cchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhh
Q 017528 83 LIGITFSLDLYGIALIYTSATLAAATT-NCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAF 154 (370)
Q Consensus 83 ~~~~~~~~~~~~~al~~~~~~~~~~i~-~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~ 154 (370)
+.++..++++...++++.|.+.+-.+. ....+.+.+++.+++||+++.. +++++.+.+.|++.+-.
T Consensus 36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~------~~~gi~lIi~GVv~l~l 102 (105)
T PRK11431 36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPA------RLLSLALIVAGIIGLKL 102 (105)
T ss_pred HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHhhhc
Confidence 444578889999999999999998887 7999999999999999999999 99999999999998753
No 84
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=97.27 E-value=0.0031 Score=57.94 Aligned_cols=142 Identities=18% Similarity=0.207 Sum_probs=110.3
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHhC---CCChHHHHHHHHHHHHHHHHHHHhhhhcccCCC---CCHHHHHHHHHH
Q 017528 8 DKQRPYLTVILIQAIYAGMFLLSKAAFNG---GMNNFVFIFYRQAFATLFVAPISLAVEWKKAPP---LSFLTFCKIFFL 81 (370)
Q Consensus 8 ~~~~~~l~~l~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~---~~~~~~~~~~~~ 81 (370)
+...|-++++++++++|.+.++.|.-.++ ..|--.+..+-.++..++++|..+.-..-..++ .+..+...++..
T Consensus 244 ~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~q~~~vv~~ 323 (416)
T KOG2765|consen 244 RPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSSTQFSLVVFN 323 (416)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCceeEeeeHh
Confidence 44689999999999999999999986654 255555666666677777775554422222221 233445667888
Q ss_pred HHHHHHHHHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhc
Q 017528 82 SLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFY 155 (370)
Q Consensus 82 g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~ 155 (370)
++++.+...++|.+|.-.+++-.+++-..+.....++...++-+.+++.. .++|...+++|-+++...
T Consensus 324 ~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~------~iiGsi~Ifv~Fv~vn~~ 391 (416)
T KOG2765|consen 324 NLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSAL------YIIGSIPIFVGFVIVNIS 391 (416)
T ss_pred hHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHhheecc
Confidence 89999999999999999999999999999999999999988866666666 999999999999998864
No 85
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.24 E-value=0.00096 Score=50.90 Aligned_cols=65 Identities=18% Similarity=0.266 Sum_probs=54.4
Q ss_pred HHHHHHHHHHHHHHHhccCceeEE-eccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHh
Q 017528 263 IIVTALTYYLQAWVIEKKGPVFLA-MSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVL 327 (370)
Q Consensus 263 ~~~~~~~~~~~~~a~~~~~~~~~s-~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~ 327 (370)
+.+.+.++++...++|+.+.+.+= .-.-+..+.+.+.+++++||++++.+++|++++++|++...
T Consensus 36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~ 101 (105)
T PRK11431 36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK 101 (105)
T ss_pred HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence 345678888889999988876553 34557888899999999999999999999999999999874
No 86
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.14 E-value=0.0014 Score=49.58 Aligned_cols=65 Identities=23% Similarity=0.374 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHHHhccCceeE-EeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHhcC
Q 017528 265 VTALTYYLQAWVIEKKGPVFL-AMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVLWG 329 (370)
Q Consensus 265 ~~~~~~~~~~~a~~~~~~~~~-s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~ 329 (370)
+...+|.+...++|+++...+ ++-.-+..+.+.+.++++|+|++++.+++|.+++++|++.....
T Consensus 39 ~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~ 104 (106)
T COG2076 39 GYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG 104 (106)
T ss_pred HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence 356778888888888776543 44566778888999999999999999999999999999987543
No 87
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.10 E-value=0.0019 Score=49.63 Aligned_cols=64 Identities=11% Similarity=0.100 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHHHHhccCceeEE-eccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHh
Q 017528 264 IVTALTYYLQAWVIEKKGPVFLA-MSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVL 327 (370)
Q Consensus 264 ~~~~~~~~~~~~a~~~~~~~~~s-~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~ 327 (370)
...++++++...++|+.+...+= +..-+..+.+.+.+++++||++++.+++|+++++.|++...
T Consensus 43 ~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk 107 (109)
T PRK10650 43 AAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK 107 (109)
T ss_pred HHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 34567888888999888876543 34557778889999999999999999999999999999863
No 88
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=97.07 E-value=0.002 Score=59.10 Aligned_cols=137 Identities=15% Similarity=0.162 Sum_probs=109.4
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHh---CCCChHHHHHHHHHHHHHHHH-HHHhhhhcccC-----CCCCHHHHHHHH
Q 017528 9 KQRPYLTVILIQAIYAGMFLLSKAAFN---GGMNNFVFIFYRQAFATLFVA-PISLAVEWKKA-----PPLSFLTFCKIF 79 (370)
Q Consensus 9 ~~~~~l~~l~~~~~~~~~~~~~k~~~~---~~~~~~~~~~~r~~~~~l~l~-~~~~~~~~~~~-----~~~~~~~~~~~~ 79 (370)
+..|...++.+.+..+...++.|..+. ..+|++.......-++..+++ |+....+.... ...+...+.. .
T Consensus 161 n~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~~-~ 239 (316)
T KOG1441|consen 161 NLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLIL-L 239 (316)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHHH-H
Confidence 468999999999999999999999884 248999999998888888888 87766443222 1223333333 3
Q ss_pred HHHHHHHHHHHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhh
Q 017528 80 FLSLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLA 153 (370)
Q Consensus 80 ~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~ 153 (370)
...++. .+.+...|..+..++|-.-++....--+++.+.++++++|+++.. +..|.++++.|+.+=.
T Consensus 240 ~~sv~~-f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~------n~~G~~iai~Gv~~Y~ 306 (316)
T KOG1441|consen 240 LNSVLA-FLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFL------NALGYAIAILGVFLYS 306 (316)
T ss_pred HHHHHH-HHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchh------hHHHHHHHHHHHHHHH
Confidence 333666 666778888999999999999888888888999999999999999 9999999999998854
No 89
>PRK13499 rhamnose-proton symporter; Provisional
Probab=96.96 E-value=0.035 Score=51.67 Aligned_cols=145 Identities=9% Similarity=0.009 Sum_probs=96.6
Q ss_pred ccchhHHHHHHHHHHHHHHH-------HHHHHHHhCCCChHHHHHHHHH---HHHHHHH-HHHhhh--hcccC-----CC
Q 017528 8 DKQRPYLTVILIQAIYAGMF-------LLSKAAFNGGMNNFVFIFYRQA---FATLFVA-PISLAV--EWKKA-----PP 69 (370)
Q Consensus 8 ~~~~~~l~~l~~~~~~~~~~-------~~~k~~~~~~~~~~~~~~~r~~---~~~l~l~-~~~~~~--~~~~~-----~~ 69 (370)
+..+|++.++++.+..+... ...+...+.|.++.....-.+. .+..+.- .++.++ ++++. ++
T Consensus 171 ~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~n~~~~~~~~~k~~~~~~~~~~~ 250 (345)
T PRK13499 171 NLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAITNLGFCFIRLAKNKDLSLKADFS 250 (345)
T ss_pred chHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchhcc
Confidence 34789999999999999988 6666544456777666555554 3433332 222321 11111 11
Q ss_pred CC----HHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhhHhh---hc-cchhHHHHHHHHHHhhccccccccCccchhhh
Q 017528 70 LS----FLTFCKIFFLSLIGITFSLDLYGIALIYTSATLAAA---TT-NCLPAITFFLAVLLRMEVLKLKTVPGVAKLVG 141 (370)
Q Consensus 70 ~~----~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~---i~-~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~ 141 (370)
.+ .+......+.|++. +..+.+|..+-+..+.+.... +. ++..++..+-+. ++||+-+..+|.-+.-++|
T Consensus 251 ~~~~~~~~n~l~~~l~G~~W-~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~G 328 (345)
T PRK13499 251 LAKPLLITNVLLSALAGVMW-YLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSLG 328 (345)
T ss_pred ccchhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHHH
Confidence 12 23333346777777 788888888888886655544 55 666677777777 5999988777788888999
Q ss_pred HHHHHhhhhhhhh
Q 017528 142 ILICIGGAATLAF 154 (370)
Q Consensus 142 i~l~~~Gv~li~~ 154 (370)
+++.++|.+++..
T Consensus 329 ~vliI~g~~lig~ 341 (345)
T PRK13499 329 CVVIILAANIVGL 341 (345)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999998875
No 90
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=96.94 E-value=0.0024 Score=47.74 Aligned_cols=57 Identities=23% Similarity=0.201 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHHHhhcChhhHhhhc-cchhHHHHHHHHHHhhccccccccCccchhhhHHHH
Q 017528 83 LIGITFSLDLYGIALIYTSATLAAATT-NCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILIC 145 (370)
Q Consensus 83 ~~~~~~~~~~~~~al~~~~~~~~~~i~-~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~ 145 (370)
+.+++.++.++..++++.|.+.+-.+. .+..+.+.+.+.+++||+++.. ++.|+.+.
T Consensus 36 ~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~------~~~gi~lI 93 (93)
T PF00893_consen 36 VVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLS------KWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------------HHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHhheeeC
Confidence 345578889999999999999998776 7999999999999999999999 99998763
No 91
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=96.94 E-value=0.0017 Score=57.78 Aligned_cols=76 Identities=24% Similarity=0.285 Sum_probs=65.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHhcCcc
Q 017528 255 LLAVAYCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVLWGKS 331 (370)
Q Consensus 255 ~~~l~~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~~ 331 (370)
......=++ ...+...+.+.++++.+|+...++..+..+++.++++++++.+++..||++..++++|+.+......
T Consensus 17 ~~~~~vPA~-lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~ 92 (244)
T PF04142_consen 17 TLKLAVPAL-LYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSS 92 (244)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCc
Confidence 334444444 3667888899999999999999999999999999999999999999999999999999999866443
No 92
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=96.91 E-value=0.0011 Score=58.89 Aligned_cols=132 Identities=15% Similarity=0.074 Sum_probs=78.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHHHH
Q 017528 190 GCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDPHEWVLGWNVRLLAVAYCGIIVTALT 269 (370)
Q Consensus 190 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 269 (370)
|.+.+++|+++++-..+=.|+.... |++...++++....+..+...++.+.+ .+ . .+..+|...-+.+
T Consensus 1 G~~a~~va~~~fGs~~vPvK~~~~g--Dg~~fQw~~~~~i~~~g~~v~~~~~~p--~f---~-----p~amlgG~lW~~g 68 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKKFDTG--DGFFFQWVMCSGIFLVGLVVNLILGFP--PF---Y-----PWAMLGGALWATG 68 (254)
T ss_pred CchhHHHHHHHhcccceeeEeccCC--CcHHHHHHHHHHHHHHHHHHHHhcCCC--cc---e-----eHHHhhhhhhhcC
Confidence 4567788999999888888776433 667777777777777776666554331 11 0 1111111112223
Q ss_pred HHHHHHHHhccCceeEEec-cchHHHHHHHHHHH-Hhcccc-----hhhhHHHHHHHHHHHHHHhcCcchh
Q 017528 270 YYLQAWVIEKKGPVFLAMS-TPLALIFTTIASVF-LLCEII-----TLGRILGGLLLIGGLYAVLWGKSKE 333 (370)
Q Consensus 270 ~~~~~~a~~~~~~~~~s~~-~~~~pi~~~~~~~~-~~~e~~-----~~~~~iG~~li~~g~~l~~~~~~~~ 333 (370)
..+-.-.++.++-...-.+ ...+.+.+...+.+ +||+.+ .+..++|.+++++|..++..-|.++
T Consensus 69 N~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~ 139 (254)
T PF07857_consen 69 NILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEE 139 (254)
T ss_pred ceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCC
Confidence 3333333444443333222 33466777777655 455433 5789999999999999987765544
No 93
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=96.83 E-value=0.013 Score=52.47 Aligned_cols=139 Identities=11% Similarity=0.074 Sum_probs=114.1
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHHHHHHHHhhhhcccCC-----CCCHHHHHHHHHH
Q 017528 8 DKQRPYLTVILIQAIYAGMFLLSKAAFNG-GMNNFVFIFYRQAFATLFVAPISLAVEWKKAP-----PLSFLTFCKIFFL 81 (370)
Q Consensus 8 ~~~~~~l~~l~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 81 (370)
++..|++++....++=|..+.....+.+. ++++..+.+.-.++.++......+.... .++ +..++.++-+++.
T Consensus 169 ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~-~~~av~F~~~hp~~~~Di~l~ 247 (327)
T KOG1581|consen 169 NSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGH-LLPAVSFIKEHPDVAFDILLY 247 (327)
T ss_pred CchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCC-CchHHHHHHcChhHHHHHHHH
Confidence 44578899988888888888888877764 6889999999998888887776544222 121 2356778888999
Q ss_pred HHHHHHHHHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhh
Q 017528 82 SLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAF 154 (370)
Q Consensus 82 g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~ 154 (370)
..++ ..++.+.++-++.-++-.-+.+..+-=+++.+++.+.++.+++.. +|.|+.+.+.|+.+=..
T Consensus 248 s~~g-avGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~------q~~g~~iVFg~i~l~~~ 313 (327)
T KOG1581|consen 248 STCG-AVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSE------QWLGVLIVFGGIFLEIL 313 (327)
T ss_pred HHhh-hhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchh------hccCeeeehHHHHHHHH
Confidence 9999 888889999999888888888888999999999999999999999 99999999999877554
No 94
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=96.80 E-value=0.0021 Score=48.11 Aligned_cols=56 Identities=23% Similarity=0.341 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHHHhccCceeEEec-cchHHHHHHHHHHHHhcccchhhhHHHHHHH
Q 017528 264 IVTALTYYLQAWVIEKKGPVFLAMS-TPLALIFTTIASVFLLCEIITLGRILGGLLL 319 (370)
Q Consensus 264 ~~~~~~~~~~~~a~~~~~~~~~s~~-~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li 319 (370)
.+.+.++.++.+++|+.+.+.+=.+ .-+..+.+.+.+++++||++++.+++|+++|
T Consensus 37 ~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 37 VGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 3567888999999999998888544 5589999999999999999999999999876
No 95
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.79 E-value=0.021 Score=46.25 Aligned_cols=141 Identities=11% Similarity=-0.017 Sum_probs=88.4
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHH
Q 017528 9 KQRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGITF 88 (370)
Q Consensus 9 ~~~~~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 88 (370)
....++..+.+..+-.....+...+.+..-+|....+..+..+.+.+..+.+.+.+.......++.-+|.+.-|++| +.
T Consensus 3 ~~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~~GG~lG-a~ 81 (150)
T COG3238 3 MYLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAWIGGLLG-AI 81 (150)
T ss_pred cHHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHHHccchh-hh
Confidence 34667778888888888887777777762359999999999999998888877444333333344455566667666 54
Q ss_pred HHHHHHHHHhhcChhhHhhhc-cchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhh
Q 017528 89 SLDLYGIALIYTSATLAAATT-NCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATL 152 (370)
Q Consensus 89 ~~~~~~~al~~~~~~~~~~i~-~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li 152 (370)
.-+.-........++....+. .-+-+...++..+=.. =-.+++++..+++|+++.++|+.++
T Consensus 82 ~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~--g~~~~~~~~~r~lgi~L~l~gil~~ 144 (150)
T COG3238 82 FVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWF--GVPKRPLNLPRILGILLVLAGILLA 144 (150)
T ss_pred hhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhccc--CCCcCCCCHHHHHHHHHHHHHHHHh
Confidence 444444555555555554433 3344444444432211 0112455556999999999995554
No 96
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=96.73 E-value=0.017 Score=51.33 Aligned_cols=193 Identities=10% Similarity=0.037 Sum_probs=116.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 017528 12 PYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGITFSLD 91 (370)
Q Consensus 12 ~~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 91 (370)
|++..+++++.+|++++-.|..- . .|++.+-++......+.-+.+.+.++ .+ +-+++.++-|.+. +.++.
T Consensus 1 G~~a~~va~~~fGs~~vPvK~~~-~-gDg~~fQw~~~~~i~~~g~~v~~~~~---~p----~f~p~amlgG~lW-~~gN~ 70 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKKFD-T-GDGFFFQWVMCSGIFLVGLVVNLILG---FP----PFYPWAMLGGALW-ATGNI 70 (254)
T ss_pred CchhHHHHHHHhcccceeeEecc-C-CCcHHHHHHHHHHHHHHHHHHHHhcC---CC----cceeHHHhhhhhh-hcCce
Confidence 56788999999999999999543 3 57777776666555555555444321 22 2356677778887 88888
Q ss_pred HHHHHHhhcChhhHhhhccchhHH-HHHHHHH-HhhccccccccCccchhhhHHHHHhhhhhhhhccCCccc----cccc
Q 017528 92 LYGIALIYTSATLAAATTNCLPAI-TFFLAVL-LRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLR----LLCH 165 (370)
Q Consensus 92 ~~~~al~~~~~~~~~~i~~~~pi~-~~ll~~l-~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~----~~~~ 165 (370)
+-.-.++....+....+.++.-++ .-..+.+ +++++.... +-....++|++++++|..+..+.+.+... .+++
T Consensus 71 ~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~-~~~~Ln~~G~~l~~~~~~~f~fik~~~~~~~~~~~~~ 149 (254)
T PF07857_consen 71 LVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVP-SSPWLNYIGVALVLVSGIIFSFIKSEEKEPKKSSEET 149 (254)
T ss_pred eehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceecccccccc-chhHHHHHHHHHHHHHHHheeeecCCCCCcccccccc
Confidence 889999999999999988653333 3333333 344332221 11233778888888888877664332211 0000
Q ss_pred cccccC-CCCccc---ccccC------CCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 017528 166 HHIFGH-HNSQQI---HGHVS------SGKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSY 215 (370)
Q Consensus 166 ~~~~~~-~~~~~~---~~~~~------~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~ 215 (370)
+...++ .+.+++ +.+++ .......|..+++++++.|+...+=..+..++.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~S~vd~l~~~~~RivG~~LAv~aGvlyGs~fvPv~Yi~~~~ 209 (254)
T PF07857_consen 150 PLSIEDVIEIEDDSENSEDSSWVDELSPRKKRIVGIILAVFAGVLYGSNFVPVIYIQDHP 209 (254)
T ss_pred ccccccccccccccccccccccccccccccchhHhHHHHHHHHHHHhcccchHHHHHhCc
Confidence 000000 000000 00000 111367899999999999999887777766553
No 97
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=96.66 E-value=0.015 Score=44.71 Aligned_cols=109 Identities=14% Similarity=0.062 Sum_probs=75.3
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHHHHHHHHHH
Q 017528 196 SSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDPHEWVLGWNVRLLAVAYCGIIVTALTYYLQAW 275 (370)
Q Consensus 196 ~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~ 275 (370)
+.+++|+..+-+.||..+..++.... . +..-.... ++. .++.+. ....+..+-..|++
T Consensus 3 ~Vg~~WG~Tnpfik~g~~~~~~~~~~-~-~~~~~~~~-----Ll~----------n~~y~i-----pf~lNq~GSv~f~~ 60 (113)
T PF10639_consen 3 LVGILWGCTNPFIKRGSSGLEKVKAS-L-QLLQEIKF-----LLL----------NPKYII-----PFLLNQSGSVLFFL 60 (113)
T ss_pred eehHHhcCchHHHHHHHhhcCCccch-H-HHHHHHHH-----HHH----------hHHHHH-----HHHHHHHHHHHHHH
Confidence 45789999999999988765532222 1 21111111 010 111111 22334556667889
Q ss_pred HHhccCceeEEec-cchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHH
Q 017528 276 VIEKKGPVFLAMS-TPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAV 326 (370)
Q Consensus 276 a~~~~~~~~~s~~-~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~ 326 (370)
.+.+.+-+.+.++ ..+.-+++++.++++.+|..+...++|+++++.|+.+.
T Consensus 61 ~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 61 LLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC 112 (113)
T ss_pred HHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence 9999999999998 58999999999998888888999999999999998753
No 98
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=96.18 E-value=0.027 Score=49.40 Aligned_cols=59 Identities=12% Similarity=-0.021 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhh
Q 017528 87 TFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAAT 151 (370)
Q Consensus 87 ~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~l 151 (370)
..+..+..+.++|.++...+....+.++++.+++.++++|+++.. ++.|+.+.+.|+.+
T Consensus 163 a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~------~~~g~~lV~~~~~l 221 (222)
T TIGR00803 163 VGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISST------FYLGAILVFLATFL 221 (222)
T ss_pred HhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHH------HHHHHHHHHeeeEe
Confidence 566677889999999999999999999999999999999999999 99999999988753
No 99
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=96.09 E-value=0.0029 Score=54.88 Aligned_cols=132 Identities=14% Similarity=0.060 Sum_probs=91.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHHHH
Q 017528 190 GCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDPHEWVLGWNVRLLAVAYCGIIVTALT 269 (370)
Q Consensus 190 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 269 (370)
..+++++=++.|+..-....+. ...|.+.+.-..+.+.++.+.+.++..++. ....+..-+..|. .=.++
T Consensus 3 ~~liaL~P~l~WGsip~v~~k~---GG~p~qQ~lGtT~GALifaiiv~~~~~p~~------T~~~~iv~~isG~-~Ws~G 72 (288)
T COG4975 3 DLLIALLPALGWGSIPLVANKF---GGKPYQQTLGTTLGALIFAIIVFLFVSPEL------TLTIFIVGFISGA-FWSFG 72 (288)
T ss_pred hHHHHHHHHHHhcccceeeeec---CCChhHhhhhccHHHHHHHHHHheeecCcc------chhhHHHHHHhhh-Hhhhh
Confidence 4678888899998876665433 235677777777777777766655522211 1122222233333 35578
Q ss_pred HHHHHHHHhccCceeEEecc-chHHHHHHHHHHHHhcccchhhhHH----HHHHHHHHHHHHhcCcc
Q 017528 270 YYLQAWVIEKKGPVFLAMST-PLALIFTTIASVFLLCEIITLGRIL----GGLLLIGGLYAVLWGKS 331 (370)
Q Consensus 270 ~~~~~~a~~~~~~~~~s~~~-~~~pi~~~~~~~~~~~e~~~~~~~i----G~~li~~g~~l~~~~~~ 331 (370)
+...+++++..+.+++.++. -.+-+-+.++++++|||-.++.+.+ ..++++.|+++..+.++
T Consensus 73 Q~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~ 139 (288)
T COG4975 73 QANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDR 139 (288)
T ss_pred hhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeecc
Confidence 88999999999999999875 4677888999999999999877654 56677788877666544
No 100
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=96.01 E-value=0.34 Score=44.75 Aligned_cols=138 Identities=15% Similarity=0.105 Sum_probs=90.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCC---CchhHHHHHHHHHHHHHHHHHHHhcCC--------CcccccccchhhHHHH
Q 017528 191 CFIMLSSNTSFGLWLVLQGFVMKSYP---SKLLFTTLQCFLSSIQSFAIAIALERD--------PHEWVLGWNVRLLAVA 259 (370)
Q Consensus 191 ~~~~l~a~~~~a~~~v~~~~~~~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~~--------~~~~~~~~~~~~~~l~ 259 (370)
.+..+...+-++......|+..++.+ .|.+..+..-+.-.+++....+..++. ........+.+..-+.
T Consensus 17 ~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~ 96 (345)
T KOG2234|consen 17 YLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVS 96 (345)
T ss_pred HHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHH
Confidence 33444444555555556665544432 334555555556666666655544311 1111111221222222
Q ss_pred HHHHHHHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHhcC
Q 017528 260 YCGIIVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVLWG 329 (370)
Q Consensus 260 ~~g~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~ 329 (370)
.=+. ..++...+++.++.+.+|++..+...+..+.+.++..++++++++.+||...++...|+.+.++.
T Consensus 97 vPa~-iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~ 165 (345)
T KOG2234|consen 97 VPAL-IYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLP 165 (345)
T ss_pred HHHH-HHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhcc
Confidence 2222 35566678999999999999999999999999999999999999999999999999999998743
No 101
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=95.77 E-value=0.087 Score=45.56 Aligned_cols=137 Identities=13% Similarity=0.064 Sum_probs=101.8
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHHHHHHHHhhhhcccCC-----CCCHHHHHHHHHHHH
Q 017528 10 QRPYLTVILIQAIYAGMFLLSKAAFNG-GMNNFVFIFYRQAFATLFVAPISLAVEWKKAP-----PLSFLTFCKIFFLSL 83 (370)
Q Consensus 10 ~~~~l~~l~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~-----~~~~~~~~~~~~~g~ 83 (370)
..|.++++++..+-|...........+ .-+...+.+.-.+-+.+.+..-+++... .|. .-.+..|+.+...++
T Consensus 171 g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGE-lweF~yF~~RhP~~~~~l~l~ai 249 (337)
T KOG1580|consen 171 GFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGE-LWEFFYFVQRHPYVFWDLTLLAI 249 (337)
T ss_pred chHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhh-HHHHHHHHHhccHHHHHHHHHHH
Confidence 357788888888888888877665543 1233444555555555555544443221 110 012455777888888
Q ss_pred HHHHHHHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhh
Q 017528 84 IGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAF 154 (370)
Q Consensus 84 ~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~ 154 (370)
++ ++++.+.+.-+.+-+|-..+++..+--+|+.+.+.++++..++.+ ||+|..+.+.|...=..
T Consensus 250 ~s-~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~r------QwlgtvlVF~aL~~D~~ 313 (337)
T KOG1580|consen 250 AS-CLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGR------QWLGTVLVFSALTADVV 313 (337)
T ss_pred HH-HhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHH------HHHHHHHHHHHhhhHhh
Confidence 88 999999999999999999999999999999999999999999999 99999999998877554
No 102
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=95.65 E-value=0.13 Score=46.72 Aligned_cols=139 Identities=13% Similarity=0.122 Sum_probs=109.9
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHHHHHHHHhhhhccc-----C-CCCCHHHHHHHHHH
Q 017528 9 KQRPYLTVILIQAIYAGMFLLSKAAFNG-GMNNFVFIFYRQAFATLFVAPISLAVEWKK-----A-PPLSFLTFCKIFFL 81 (370)
Q Consensus 9 ~~~~~l~~l~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~-----~-~~~~~~~~~~~~~~ 81 (370)
+..|+.+++...+.-+...+..|...+. +.+-..+.++..++..+.+.......+..+ . ...+...+..+.+.
T Consensus 155 ~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lS 234 (314)
T KOG1444|consen 155 NLRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLS 234 (314)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHH
Confidence 4468999999999999999999998775 577888999999999888887765533211 0 11234557778888
Q ss_pred HHHHHHHHHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhh
Q 017528 82 SLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAF 154 (370)
Q Consensus 82 g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~ 154 (370)
++++ .+-+++-+++.+..++...++.....-..+.+...++.+++.++. ..+|+.+++.|-++=.+
T Consensus 235 cv~g-f~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~------n~~gll~~~~ggv~Y~~ 300 (314)
T KOG1444|consen 235 CVMG-FGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFL------NVIGLLVGFFGGVLYSY 300 (314)
T ss_pred HHHH-HHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechh------hhHHHHHHhhhhhHHhh
Confidence 8888 556668888999999888888887777788888888888999999 99999999999887554
No 103
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=95.30 E-value=0.074 Score=45.61 Aligned_cols=137 Identities=15% Similarity=0.088 Sum_probs=107.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHHHHHHHHhhhhcccC----CCCCHHHHHHHHHHHHHH
Q 017528 11 RPYLTVILIQAIYAGMFLLSKAAFNG-GMNNFVFIFYRQAFATLFVAPISLAVEWKKA----PPLSFLTFCKIFFLSLIG 85 (370)
Q Consensus 11 ~~~l~~l~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~ 85 (370)
.|++++...++.-+..-...|.-.+- +.......++..+.+..+++.+....+.+.. ..++.....++++.|++.
T Consensus 155 ~GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~s 234 (309)
T COG5070 155 PGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCS 234 (309)
T ss_pred CceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHH
Confidence 46666777776666666666654432 4778899999999999999888776554433 234567778889999988
Q ss_pred HHHHHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhh
Q 017528 86 ITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAF 154 (370)
Q Consensus 86 ~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~ 154 (370)
++..++-.|.++-++....+.+-.+.-.-.++-+.++++|+.++. .+.++++++...++-..
T Consensus 235 -vgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~------si~sillGflsg~iYav 296 (309)
T COG5070 235 -VGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFL------SIFSILLGFLSGAIYAV 296 (309)
T ss_pred -hhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHH------HHHHHHHHHHHHHHHHH
Confidence 666678889999999999999999999999999999999999999 99999998877666543
No 104
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.23 E-value=0.0046 Score=55.82 Aligned_cols=126 Identities=17% Similarity=0.165 Sum_probs=93.9
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHH
Q 017528 184 GKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDPHEWVLGWNVRLLAVAYCGI 263 (370)
Q Consensus 184 ~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~ 263 (370)
..++..|..+++.+.+..+...++.|+..++... . ..-..... ........|+ .|+
T Consensus 16 ~~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~----~--------------~~ra~~gg--~~yl~~~~Ww----~G~ 71 (335)
T KOG2922|consen 16 SSDNIIGLVLAISSSIFIGSSFILKKKGLKRAGA----S--------------GLRAGEGG--YGYLKEPLWW----AGM 71 (335)
T ss_pred ccCceeeeeehhhccEEEeeehhhhHHHHHHHhh----h--------------cccccCCC--cchhhhHHHH----HHH
Confidence 3445689999999999999999998887665321 0 00001111 1111111222 367
Q ss_pred HHHHHHHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHhcCcchh
Q 017528 264 IVTALTYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVLWGKSKE 333 (370)
Q Consensus 264 ~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~~~~ 333 (370)
+..+++-.+-+.+....+++.+++++.++.+++.+++..+++|.++....+|+++.++|..+.....+++
T Consensus 72 ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e 141 (335)
T KOG2922|consen 72 LTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKE 141 (335)
T ss_pred HHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcc
Confidence 7778888888899999999999999999999999999999999999999999999999988876554443
No 105
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=91.55 E-value=0.086 Score=44.31 Aligned_cols=61 Identities=20% Similarity=0.270 Sum_probs=56.2
Q ss_pred HHHHHHHHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHhcC
Q 017528 269 TYYLQAWVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVLWG 329 (370)
Q Consensus 269 ~~~~~~~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~ 329 (370)
+.+.|..++++++|+.++.+..-+--+..+++++++|+++...+++..++.+.|++...+.
T Consensus 66 aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~ 126 (290)
T KOG4314|consen 66 ANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYA 126 (290)
T ss_pred CCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEec
Confidence 4567889999999999999999999999999999999999999999999999999887653
No 106
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=91.46 E-value=1.7 Score=39.39 Aligned_cols=122 Identities=20% Similarity=0.280 Sum_probs=84.8
Q ss_pred HHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhcCC-Cccc-ccccchhhHHHHHHHHHHHHHHHHHHHHHHhccCceeE
Q 017528 208 QGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERD-PHEW-VLGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFL 285 (370)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~-~~~~~~~~~~l~~~g~~~~~~~~~~~~~a~~~~~~~~~ 285 (370)
.+...++.+-|+..+..+...-.......-...+.. +... ...+...+-.++-.|+ +++.-..+-++++++++.+..
T Consensus 35 ~~~~~~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtal-ata~DIGLSN~sl~yVtlSlY 113 (349)
T KOG1443|consen 35 FKWLTKNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTAL-ATALDIGLSNWSLEYVTLSLY 113 (349)
T ss_pred hhhhhcCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhh-hhhcccccccceeeeeeeeee
Confidence 333344455567777777766655554433333321 2211 1112222333445554 577778889999999999999
Q ss_pred EeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHhcCc
Q 017528 286 AMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVLWGK 330 (370)
Q Consensus 286 s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~ 330 (370)
++.-+..++|..+++.++-=|.+++....=..+|-+|+++.+++.
T Consensus 114 TM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~Ks 158 (349)
T KOG1443|consen 114 TMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKS 158 (349)
T ss_pred eeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecc
Confidence 999999999999999999999999999888888889988887654
No 107
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=91.19 E-value=1.6 Score=40.40 Aligned_cols=140 Identities=14% Similarity=-0.047 Sum_probs=84.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHH--hcCC-CcccccccchhhHHHHHHH
Q 017528 186 TWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIA--LERD-PHEWVLGWNVRLLAVAYCG 262 (370)
Q Consensus 186 ~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~-~~~~~~~~~~~~~~l~~~g 262 (370)
+...|+++-.+++++.+.+.+=.||..+- + .+.......+-.-+..|.... .-++ .+.....+...+....+.|
T Consensus 4 ~ii~Gii~h~iGg~~~~sfy~P~kkvk~W--s-WEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G 80 (344)
T PF06379_consen 4 AIILGIIFHAIGGFASGSFYVPFKKVKGW--S-WESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLFG 80 (344)
T ss_pred hHHHHHHHHHHHHHHhhhhccchhhcCCc--c-HHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHH
Confidence 45789999999999999999998886543 3 333333333333333343322 2222 1112222333455555566
Q ss_pred HHHHHHHHHHHHHHHhccCceeEE-eccchHHHHHHHHHHHHhcc-------cchhhhHHHHHHHHHHHHHHhcC
Q 017528 263 IIVTALTYYLQAWVIEKKGPVFLA-MSTPLALIFTTIASVFLLCE-------IITLGRILGGLLLIGGLYAVLWG 329 (370)
Q Consensus 263 ~~~~~~~~~~~~~a~~~~~~~~~s-~~~~~~pi~~~~~~~~~~~e-------~~~~~~~iG~~li~~g~~l~~~~ 329 (370)
++ =+++-..|..++|+++.+... +..-+.-+++.++--++.|+ +-....++|.++.++|+.+..+.
T Consensus 81 ~l-WGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~A 154 (344)
T PF06379_consen 81 VL-WGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKA 154 (344)
T ss_pred HH-HhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHH
Confidence 64 567777888999999875443 33444555555554444332 22356788999999999988654
No 108
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=91.16 E-value=2 Score=38.28 Aligned_cols=140 Identities=15% Similarity=0.089 Sum_probs=98.0
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHh-CCCChHHHHHHHHHHHHHHHHHHHhhhhccc--C---CCCCHHHHHHHHHHHH
Q 017528 10 QRPYLTVILIQAIYAGMFLLSKAAFN-GGMNNFVFIFYRQAFATLFVAPISLAVEWKK--A---PPLSFLTFCKIFFLSL 83 (370)
Q Consensus 10 ~~~~l~~l~~~~~~~~~~~~~k~~~~-~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~--~---~~~~~~~~~~~~~~g~ 83 (370)
..|+.++-.+-+.-+...-+.....+ ++-+..+++++.+.+++++++..+.....-. + .+-+++.+...++.+.
T Consensus 189 ~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~ 268 (367)
T KOG1582|consen 189 LIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSL 268 (367)
T ss_pred eeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHH
Confidence 45666666666665555444444443 3467789999999999999887766532211 1 1224566777777776
Q ss_pred HHHHHHHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhcc
Q 017528 84 IGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYN 156 (370)
Q Consensus 84 ~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~ 156 (370)
.+ .++...-..=++.-++..++.+...--..|.+++++++..+++.. ...+.++.+.|+++=..++
T Consensus 269 ~g-ylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~q------y~~~gllv~lgI~Ln~ysk 334 (367)
T KOG1582|consen 269 AG-YLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQ------YVWSGLLVVLGIYLNMYSK 334 (367)
T ss_pred Hh-HhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHH------HhhhhHHHHHHHHhhcccC
Confidence 66 555544444455567778888888888999999999999999998 8888999999999877643
No 109
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=90.39 E-value=4.6 Score=36.30 Aligned_cols=138 Identities=16% Similarity=0.219 Sum_probs=92.4
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHH-hCCCChHHHHHHHHHHHHHHHHHHHhhhh----ccc---CCCCCHHHHHHH--
Q 017528 9 KQRPYLTVILIQAIYAGMFLLSKAAF-NGGMNNFVFIFYRQAFATLFVAPISLAVE----WKK---APPLSFLTFCKI-- 78 (370)
Q Consensus 9 ~~~~~l~~l~~~~~~~~~~~~~k~~~-~~~~~~~~~~~~r~~~~~l~l~~~~~~~~----~~~---~~~~~~~~~~~~-- 78 (370)
-..|.++.+.+.++.+...++=...+ +++.+|.+.+.+...++.+++..+..... .+. .++-.+.+|...
T Consensus 174 iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~eD~~~~~~ 253 (372)
T KOG3912|consen 174 IITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLEDWGDAFA 253 (372)
T ss_pred chhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchhhHHHHHH
Confidence 35689999999999999998865544 45799999999999999666544433211 101 112223333321
Q ss_pred -------HHHHHHHHHHHHHHHHH----HHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHh
Q 017528 79 -------FFLSLIGITFSLDLYGI----ALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIG 147 (370)
Q Consensus 79 -------~~~g~~~~~~~~~~~~~----al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~ 147 (370)
+...+.+...+..+|++ --++.+++.=.++-.+-..+..+++.....|+++.. ++.|.++.+.
T Consensus 254 ~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~ll------qilGFliLi~ 327 (372)
T KOG3912|consen 254 ALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLL------QILGFLILIM 327 (372)
T ss_pred HhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHH------HHHHHHHHHH
Confidence 22222222222222222 234566777777778889999999999999999999 9999999999
Q ss_pred hhhhh
Q 017528 148 GAATL 152 (370)
Q Consensus 148 Gv~li 152 (370)
|+.+-
T Consensus 328 Gi~lY 332 (372)
T KOG3912|consen 328 GIILY 332 (372)
T ss_pred HHHHH
Confidence 98773
No 110
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=88.00 E-value=0.93 Score=34.00 Aligned_cols=111 Identities=17% Similarity=0.153 Sum_probs=69.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCh------HHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHH
Q 017528 15 TVILIQAIYAGMFLLSKAAFNGGMNN------FVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGITF 88 (370)
Q Consensus 15 ~~l~~~~~~~~~~~~~k~~~~~~~~~------~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 88 (370)
-++...++||.++.+.|.... |.+. -...++|-.-.. ..+++.+. -+.+- -.
T Consensus 7 ~lvaVgllWG~Tnplirrgs~-g~~~v~~~~~k~~~~lqe~~tl----------------~l~w~Y~i-PFllN----qc 64 (125)
T KOG4831|consen 7 KLVAVGLLWGATNPLIRRGSL-GWDKVKSSSRKIMIALQEMKTL----------------FLNWEYLI-PFLLN----QC 64 (125)
T ss_pred HHHHHHHHHccccHHHHHHHh-hHhhccCchHHHHHHHHHHHHH----------------HHhHHHHH-HHHHH----Hh
Confidence 456778899999999998765 2331 122222211110 01122222 22222 23
Q ss_pred HHHHHHHHHhhcChhhHhhhc-cchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhh
Q 017528 89 SLDLYGIALIYTSATLAAATT-NCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLA 153 (370)
Q Consensus 89 ~~~~~~~al~~~~~~~~~~i~-~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~ 153 (370)
+..+||.-++..+.+.+..+. ++.-.|+++.+..+ +|+...+ ..+.|..+.++|+.+.+
T Consensus 65 gSaly~~tLa~a~islavpv~nsltfafta~~G~~L-GE~~~g~-----~a~lGt~liv~Gi~Lci 124 (125)
T KOG4831|consen 65 GSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKAL-GEETQGG-----LALLGTSLIVFGIWLCI 124 (125)
T ss_pred hHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHh-ccccccc-----eeehhhhHHhhhhhhee
Confidence 455778999999999999888 66778888888765 5555444 27889999999987754
No 111
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=87.61 E-value=0.75 Score=41.56 Aligned_cols=111 Identities=9% Similarity=0.044 Sum_probs=71.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhhcc------cC-------CCCCHHHHHHHHHHH
Q 017528 16 VILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWK------KA-------PPLSFLTFCKIFFLS 82 (370)
Q Consensus 16 ~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~------~~-------~~~~~~~~~~~~~~g 82 (370)
|+++.++||++....|++.+++--| +..++-+.++.++..+++-+.... .. .+.++......+.-|
T Consensus 1 M~itmlcwGSW~nt~kL~~r~gR~~-qh~Y~DYsig~lL~All~A~TlGs~G~~~~~g~~Fl~qL~Q~n~~sv~~A~aGG 79 (336)
T PF07168_consen 1 MVITMLCWGSWPNTQKLAERRGRLP-QHFYWDYSIGNLLAALLIAFTLGSIGESTPEGPNFLTQLSQANWPSVLFAMAGG 79 (336)
T ss_pred CeeehhhhcChHHHHHHHHhcCCcc-ceehhHHHHHHHHHHHHHHHhccccCCCCCCCccHHHHHhcCChHHHHHHHHhh
Confidence 3567899999999999988763322 346666666666555444332111 11 123556666667777
Q ss_pred HHHHHHHHHHHHHHHhhcChhhHhhhc-cchhHHHHHHHHHHhhcccc
Q 017528 83 LIGITFSLDLYGIALIYTSATLAAATT-NCLPAITFFLAVLLRMEVLK 129 (370)
Q Consensus 83 ~~~~~~~~~~~~~al~~~~~~~~~~i~-~~~pi~~~ll~~l~~~e~~~ 129 (370)
++. .+++.+.-+|+.+...+.+-++. .+.-++..++.++. ..|.+
T Consensus 80 vvf-nlgNillq~aia~aGmSVafpvg~glalVlGv~~NYfl-d~~~n 125 (336)
T PF07168_consen 80 VVF-NLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNYFL-DPKIN 125 (336)
T ss_pred Hhh-hhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeeeec-cCCCC
Confidence 766 78888999999999988888777 55555555555543 44444
No 112
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=85.49 E-value=0.86 Score=40.58 Aligned_cols=139 Identities=15% Similarity=0.082 Sum_probs=93.2
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHHHHHHHHhhhhcc----cCCCC-CHHHHHHHHHHH
Q 017528 9 KQRPYLTVILIQAIYAGMFLLSKAAFNG-GMNNFVFIFYRQAFATLFVAPISLAVEWK----KAPPL-SFLTFCKIFFLS 82 (370)
Q Consensus 9 ~~~~~l~~l~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~r~~~~~l~l~~~~~~~~~~----~~~~~-~~~~~~~~~~~g 82 (370)
...|.++.+++.+.-+...+..|..... |=-...++++..+.+.+.++|.+.+.+.- ..++. ..+-|..+.+.|
T Consensus 183 s~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsg 262 (347)
T KOG1442|consen 183 SWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSG 262 (347)
T ss_pred chhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHH
Confidence 4579999999999999999999976554 22367888999999999999988764321 12233 456677777788
Q ss_pred HHHHHHHHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhh
Q 017528 83 LIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAF 154 (370)
Q Consensus 83 ~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~ 154 (370)
++|+..++. -.+=++-++|-.--+-...-...-.+++..+++|..+.. .|-+-++.++|-..-..
T Consensus 263 lfgF~mgyv-Tg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~l------wwtsn~~vLvgs~~YT~ 327 (347)
T KOG1442|consen 263 LFGFAMGYV-TGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGL------WWTSNIVVLVGSLAYTL 327 (347)
T ss_pred HHHHHhhhe-eeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhh------eeeeeEEEEehhHHHHH
Confidence 887554431 122223333322222222334455678899999999988 88888888877665444
No 113
>PRK02237 hypothetical protein; Provisional
Probab=83.30 E-value=2.1 Score=32.41 Aligned_cols=41 Identities=5% Similarity=-0.031 Sum_probs=34.3
Q ss_pred chHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHhcCc
Q 017528 290 PLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVLWGK 330 (370)
Q Consensus 290 ~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~ 330 (370)
-.-.+.+.++.+.+-|++|+...++|.++.++|+.+..+..
T Consensus 67 GvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p 107 (109)
T PRK02237 67 GVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAP 107 (109)
T ss_pred hHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence 34456677889999999999999999999999998876543
No 114
>PRK02237 hypothetical protein; Provisional
Probab=82.60 E-value=16 Score=27.79 Aligned_cols=49 Identities=14% Similarity=0.131 Sum_probs=37.5
Q ss_pred cChhhHhhhc-cchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhh
Q 017528 100 TSATLAAATT-NCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAF 154 (370)
Q Consensus 100 ~~~~~~~~i~-~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~ 154 (370)
...+.+-.-+ ....+...+..+.+-++|++.. +++|..++++|+.++.+
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~------D~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRW------DWIGAAICLVGMAVIMY 105 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChh------HHHhHHHHHHhHHHhee
Confidence 3355555555 5666777788888877777777 99999999999998875
No 115
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=81.91 E-value=2.1 Score=32.34 Aligned_cols=40 Identities=8% Similarity=0.072 Sum_probs=34.1
Q ss_pred hHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHhcCc
Q 017528 291 LALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVLWGK 330 (370)
Q Consensus 291 ~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~ 330 (370)
.-.+.+.++++.+-+++|+...++|.++.++|+.+..+..
T Consensus 66 vfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~P 105 (107)
T PF02694_consen 66 VFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAP 105 (107)
T ss_pred hHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecC
Confidence 3456678889999999999999999999999999877654
No 116
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=77.07 E-value=6.3 Score=29.82 Aligned_cols=54 Identities=17% Similarity=0.184 Sum_probs=41.2
Q ss_pred HHHhhcChhhHhhhc-cchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhh
Q 017528 95 IALIYTSATLAAATT-NCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAF 154 (370)
Q Consensus 95 ~al~~~~~~~~~~i~-~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~ 154 (370)
..++-.+.+.+-.-+ ....+...+..+.+-|+++++. +++|..++++|+.++.+
T Consensus 49 ~Tl~p~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~------D~iGa~i~L~G~~iI~~ 103 (107)
T PF02694_consen 49 LTLQPAAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRW------DWIGAAICLVGVAIILF 103 (107)
T ss_pred hhcCcccchhHHHHhhhhHHHHHHHHHhhhcCcCCChH------HHHhHHHHHHhHHheEe
Confidence 334445555555555 6777788888888877777777 99999999999999886
No 117
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=77.05 E-value=3 Score=37.87 Aligned_cols=130 Identities=15% Similarity=0.025 Sum_probs=69.6
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHH-HHhcCCC----------cccccccchhhHHHHHHHH
Q 017528 195 LSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIA-IALERDP----------HEWVLGWNVRLLAVAYCGI 263 (370)
Q Consensus 195 l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~----------~~~~~~~~~~~~~l~~~g~ 263 (370)
+++.+||+-+-..+|-..++... .+.+++=...+.++...+. +..+.-. .+..+.+...+.. +..|.
T Consensus 2 ~itmlcwGSW~nt~kL~~r~gR~-~qh~Y~DYsig~lL~All~A~TlGs~G~~~~~g~~Fl~qL~Q~n~~sv~~-A~aGG 79 (336)
T PF07168_consen 2 VITMLCWGSWPNTQKLAERRGRL-PQHFYWDYSIGNLLAALLIAFTLGSIGESTPEGPNFLTQLSQANWPSVLF-AMAGG 79 (336)
T ss_pred eeehhhhcChHHHHHHHHhcCCc-cceehhHHHHHHHHHHHHHHHhccccCCCCCCCccHHHHHhcCChHHHHH-HHHhh
Confidence 45678888888888776655432 1334444444444333322 2222111 1111222222322 33344
Q ss_pred HHHHHHHHHHHHHHhccCceeEEecc-chHHHHHHHHHHHHhcccch--hhhHHHHHHHHHHHHHHh
Q 017528 264 IVTALTYYLQAWVIEKKGPVFLAMST-PLALIFTTIASVFLLCEIIT--LGRILGGLLLIGGLYAVL 327 (370)
Q Consensus 264 ~~~~~~~~~~~~a~~~~~~~~~s~~~-~~~pi~~~~~~~~~~~e~~~--~~~~iG~~li~~g~~l~~ 327 (370)
+.--++..+..+++...+.+.+-++. .+..+.++.+.++ +..+.+ ...+.|.+++++++++-.
T Consensus 80 vvfnlgNillq~aia~aGmSVafpvg~glalVlGv~~NYf-ld~~~n~a~iLF~GV~cf~iAI~lga 145 (336)
T PF07168_consen 80 VVFNLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNYF-LDPKINRAEILFPGVACFLIAIILGA 145 (336)
T ss_pred HhhhhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeeee-ccCCCCCceEEEccHHHHHHHHHHHH
Confidence 44557788888888888877766553 3334445555553 344443 355668888888887754
No 118
>PRK06638 NADH:ubiquinone oxidoreductase subunit J; Provisional
Probab=76.75 E-value=48 Score=28.46 Aligned_cols=31 Identities=16% Similarity=0.236 Sum_probs=20.9
Q ss_pred HHHHHHHhcccchhhhHHHHHHHH--HHHHHHh
Q 017528 297 TIASVFLLCEIITLGRILGGLLLI--GGLYAVL 327 (370)
Q Consensus 297 ~~~~~~~~~e~~~~~~~iG~~li~--~g~~l~~ 327 (370)
-.+|..++.+-.-+.+.+|..|.+ +|.+...
T Consensus 133 ~~iG~~L~t~y~l~fe~~silLLvAmIGAI~La 165 (198)
T PRK06638 133 KAIGILLFTDYLLPFELASVLLLVAMVGAIVLA 165 (198)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 445777778877888888887766 4444443
No 119
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=76.61 E-value=49 Score=28.51 Aligned_cols=47 Identities=9% Similarity=0.156 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHH
Q 017528 73 LTFCKIFFLSLIGITFSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLL 123 (370)
Q Consensus 73 ~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~ 123 (370)
..++..++.++.. ...+...+......++...- .+.|....+++.+.
T Consensus 144 ~~~~k~~~~~~~~-~~~w~~~~~~~~~lp~~inp---~l~~~~~iiig~i~ 190 (206)
T PF06570_consen 144 PSWWKYILISVLA-MVLWIVIFVLTSFLPPVINP---VLPPWVYIIIGVIA 190 (206)
T ss_pred cHHHHHHHHHHHH-HHHHHHHHHHHHHccccCCc---CCCHHHHHHHHHHH
Confidence 3444555555444 34444444455556655432 23444444444433
No 120
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=74.48 E-value=4.9 Score=35.63 Aligned_cols=136 Identities=10% Similarity=0.042 Sum_probs=84.5
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHH
Q 017528 8 DKQRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGIT 87 (370)
Q Consensus 8 ~~~~~~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 87 (370)
+..+|-+++++++.+++.+++.-....++ .|..++...-.+++.++-..=... .+.....+.|..-....+...+.+.
T Consensus 163 np~~GD~lvi~GATlYaVSNv~EEflvkn-~d~~elm~~lgLfGaIIsaIQ~i~-~~~~~~tl~w~~~i~~yl~f~L~MF 240 (336)
T KOG2766|consen 163 NPVKGDFLVIAGATLYAVSNVSEEFLVKN-ADRVELMGFLGLFGAIISAIQFIF-ERHHVSTLHWDSAIFLYLRFALTMF 240 (336)
T ss_pred CCccCcEEEEecceeeeeccccHHHHHhc-CcHHHHHHHHHHHHHHHHHHHHhh-hccceeeEeehHHHHHHHHHHHHHH
Confidence 45678889999999999999999998886 999999988888888887665333 4444444444322222222323323
Q ss_pred HHHHHHHHHHhhcChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhh
Q 017528 88 FSLDLYGIALIYTSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLA 153 (370)
Q Consensus 88 ~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~ 153 (370)
+.+.+.-.-++..++....+-.-++-.+..++ ..++-++.+. -.++......|.++-.
T Consensus 241 llYsl~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wL------Y~laF~~i~~GliiYs 298 (336)
T KOG2766|consen 241 LLYSLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWL------YFLAFATIATGLIIYS 298 (336)
T ss_pred HHHHhhHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhh------hHHHHHHHHHhhEEee
Confidence 33323333334444444333334444555555 3445567777 7788888888877754
No 121
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=73.93 E-value=8.2 Score=29.09 Aligned_cols=55 Identities=20% Similarity=0.144 Sum_probs=44.7
Q ss_pred HHHHHHhccCceeEEec-cchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHH
Q 017528 272 LQAWVIEKKGPVFLAMS-TPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAV 326 (370)
Q Consensus 272 ~~~~a~~~~~~~~~s~~-~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~ 326 (370)
+|+.-+.+.+-+.+..+ .++.-.++.+.+..+-.|......+.|..+++.|+.+.
T Consensus 68 ly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lc 123 (125)
T KOG4831|consen 68 LYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLC 123 (125)
T ss_pred HHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhe
Confidence 47778888888888766 55688889999987666667888899999999998875
No 122
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=71.34 E-value=38 Score=25.67 Aligned_cols=48 Identities=17% Similarity=0.029 Sum_probs=32.5
Q ss_pred hcChhhHhhhc-cchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhh
Q 017528 99 YTSATLAAATT-NCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATL 152 (370)
Q Consensus 99 ~~~~~~~~~i~-~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li 152 (370)
.-++++--+++ ...-..-+.++.+++||++++. .+.|.++.+.++..+
T Consensus 58 ~~s~~QLKi~QEvitL~vF~~Fsv~~l~E~l~~n------~l~af~~i~~av~fi 106 (108)
T PF04342_consen 58 TFSLAQLKIIQEVITLVVFAPFSVFYLGEPLKWN------YLWAFLCILGAVYFI 106 (108)
T ss_pred ccCHHHHHHHHHHHhhheeHHHHHHHhCCCccHH------HHHHHHHHHHhhhee
Confidence 34455555555 3344455667888999999998 888877776666543
No 123
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=70.40 E-value=1.4 Score=39.27 Aligned_cols=14 Identities=14% Similarity=0.086 Sum_probs=0.0
Q ss_pred hhhhHHHHHhhhhh
Q 017528 138 KLVGILICIGGAAT 151 (370)
Q Consensus 138 ~~~~i~l~~~Gv~l 151 (370)
..+++++.++-..+
T Consensus 81 GlLCiilimi~lLv 94 (381)
T PF05297_consen 81 GLLCIILIMIVLLV 94 (381)
T ss_dssp --------------
T ss_pred hHHHHHHHHHHHHH
Confidence 56666655554443
No 124
>COG4657 RnfA Predicted NADH:ubiquinone oxidoreductase, subunit RnfA [Energy production and conversion]
Probab=66.08 E-value=43 Score=27.48 Aligned_cols=54 Identities=15% Similarity=0.289 Sum_probs=36.1
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHhh-----cCCCchhHHHHHHHHHHHHHHHH
Q 017528 183 SGKTWIKGCFIMLSSNTSFGLWLVLQGFVMK-----SYPSKLLFTTLQCFLSSIQSFAI 236 (370)
Q Consensus 183 ~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~-----~~~~~~~~~~~~~~~~~i~~~~~ 236 (370)
.+.+......+.+.++++|++..++-....+ +.+.|..-..+.++.+.++++.+
T Consensus 126 ~~~~f~qsv~~gf~a~lGfslvmvlfA~iRER~~~advP~~frG~~ialitagLmSlaF 184 (193)
T COG4657 126 EGHNFLQSVVYGFGAALGFSLVMVLFAAIRERLALADVPAPFRGAAIALITAGLMSLAF 184 (193)
T ss_pred hhhhHHHHHHHHhhhHhhHHHHHHHHHHHHHHHHHhcCCCCCCCcchHHHHHHHHHHHH
Confidence 3445667888999999999998877654443 34455666666666666666543
No 125
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=65.77 E-value=7 Score=29.51 Aligned_cols=31 Identities=26% Similarity=0.355 Sum_probs=26.0
Q ss_pred HHHHHHHHhcccchhhhHHHHHHHHHHHHHH
Q 017528 296 TTIASVFLLCEIITLGRILGGLLLIGGLYAV 326 (370)
Q Consensus 296 ~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~ 326 (370)
-..+++++++|++++....|.++++++++..
T Consensus 76 F~~Fsv~~l~E~l~~n~l~af~~i~~av~fi 106 (108)
T PF04342_consen 76 FAPFSVFYLGEPLKWNYLWAFLCILGAVYFI 106 (108)
T ss_pred eHHHHHHHhCCCccHHHHHHHHHHHHhhhee
Confidence 3456788999999999999999999887643
No 126
>PF00909 Ammonium_transp: Ammonium Transporter Family; InterPro: IPR024041 This ammonium transporter domain consists of a duplication of 2 structural repeats of five helices each plus one extra C-terminal helix. It has been described as a channel that spans the membrane 11 times [].; PDB: 3B9Z_A 3B9Y_A 3B9W_A 3BHS_A 2B2H_A 2B2J_A 2B2F_A 2B2I_A 2NPG_A 2NUU_E ....
Probab=63.44 E-value=1.2e+02 Score=29.24 Aligned_cols=212 Identities=14% Similarity=0.082 Sum_probs=0.0
Q ss_pred HHHHHHHHHhhcccccc------ccCccchhhhHHHHHhhhhhhhhccCCccccccccccccCCCCcccccccCCCcchH
Q 017528 115 ITFFLAVLLRMEVLKLK------TVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHIFGHHNSQQIHGHVSSGKTWI 188 (370)
Q Consensus 115 ~~~ll~~l~~~e~~~~~------~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (370)
+..+...+++++|..+. .+||-..+..+...+.=+....+..+..... ++....
T Consensus 162 ~~gL~~a~~lg~R~~~~~~~~~~~~~~s~~~~~lG~~lLw~gW~gFN~gs~~~~--------------------~~~~~~ 221 (399)
T PF00909_consen 162 VFGLAAAIVLGPRRGRFDGKPNPIPPHSPPLAMLGTLLLWFGWFGFNAGSALAA--------------------NGRAWL 221 (399)
T ss_dssp HHHHHHHHHH--CTTTTGTTTSS--HCHHHHHHHHHHHHHHHHHHHHHCCGSSS--------------------SHHHHH
T ss_pred HHHHhhheeeCCCCCcccccccCCCCCcHHHhhhhHHHHHHHhccccccccccc--------------------CCccch
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhhHHHHHHHHHHHHH
Q 017528 189 KGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDPHEWVLGWNVRLLAVAYCGIIVTAL 268 (370)
Q Consensus 189 ~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~ 268 (370)
....-..+|+.+-++......+..++..+ ........+.+.+...+.+ .-..-+..+.+|+++..+
T Consensus 222 ~~~~nT~la~a~g~l~~~~~~~~~~gk~~-~~~~~nG~laGlVaita~~-------------~~v~p~~A~~iG~iag~i 287 (399)
T PF00909_consen 222 RAAVNTLLAAAAGGLTWLLISYLLSGKWS-MVGICNGALAGLVAITAGA-------------GYVTPWGALLIGAIAGLI 287 (399)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHCSS---HHHHHHHHHHHHHHHTTTT-------------TTS-HHHHHHHHHHHHHH
T ss_pred hhhhhhhhhHHHHHHHHHHhhhccccccc-hhhhhhhhhhhhhheeccc-------------CCCcHHHHHHhhhhHhhh
Q ss_pred HHHHHH---HHHhccCceeEEeccchHHHHHHHHHHHHhcccch----------------hhhHHHHHHHHHHHHHHhcC
Q 017528 269 TYYLQA---WVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIIT----------------LGRILGGLLLIGGLYAVLWG 329 (370)
Q Consensus 269 ~~~~~~---~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~----------------~~~~iG~~li~~g~~l~~~~ 329 (370)
++.... +-.+.-++..+-.+--..=+++.+..-++-.+... ..|++|.+.++.-.....+.
T Consensus 288 ~~~~~~~l~~~~~iDD~~~~~~vHg~~Gi~G~i~~glfa~~~~~~~~~~~~~~~~~~~~l~~Ql~g~~~~~~~~~~~s~i 367 (399)
T PF00909_consen 288 SYFGVSWLLKRLKIDDPVGAFAVHGVGGIWGTILTGLFASPEVNYSDGYGGLFYGNGRQLGIQLLGIVVILAWSFVVSYI 367 (399)
T ss_dssp HHHHHHHHHHHHTS-HTTGHHHHCHHHHHHHHHHHHHHCCCHHCSS-SSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhheecccceeEeccccceEeeeeccHHHHHHHHHHHhccccccccccccccCCchhHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred cchhhhhccccCCCccccccccCcchhhhcc
Q 017528 330 KSKEQKMVDKSCLPTQVDQKVMNSDQIKVMA 360 (370)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (370)
--+--+.-..-+.++++|++-.|..++...+
T Consensus 368 ~~~~l~~~~~LRv~~~~E~~GlD~~~hg~~a 398 (399)
T PF00909_consen 368 IFKILKKFGGLRVSEEDERVGLDLSEHGEEA 398 (399)
T ss_dssp HHHHHHHHT-SB--HHHHHH-HHHHHHS--S
T ss_pred HHHHHHhccccCCCHHHHhhCCCHHHhCcCc
No 127
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=61.04 E-value=68 Score=29.03 Aligned_cols=134 Identities=9% Similarity=0.022 Sum_probs=86.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHh-CCCChHHHHHHHHHHHHHHHHHHHhh--h-----hccc---CCCC---CHHHH
Q 017528 10 QRPYLTVILIQAIYAGMFLLSKAAFN-GGMNNFVFIFYRQAFATLFVAPISLA--V-----EWKK---APPL---SFLTF 75 (370)
Q Consensus 10 ~~~~l~~l~~~~~~~~~~~~~k~~~~-~~~~~~~~~~~r~~~~~l~l~~~~~~--~-----~~~~---~~~~---~~~~~ 75 (370)
..|+.++.++.++-+...+......+ +|-++-+..|+--+...+.++...-- . .+.. .+.. -+..|
T Consensus 163 ~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~ 242 (330)
T KOG1583|consen 163 LIGIALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMW 242 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccccHHH
Confidence 35677777777777777777766554 37889999999988887776654210 0 0000 0111 12223
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh----cChhhHhhhccchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhh
Q 017528 76 CKIFFLSLIGITFSLDLYGIALIY----TSATLAAATTNCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAAT 151 (370)
Q Consensus 76 ~~~~~~g~~~~~~~~~~~~~al~~----~~~~~~~~i~~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~l 151 (370)
.+++ ..++.+++-..+... +++-.++++..+--.+..+++.+.++..+++. .|+|..+.++|..+
T Consensus 243 ~yLl-----~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~------h~lGa~lVF~Gt~~ 311 (330)
T KOG1583|consen 243 VYLL-----FNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPW------HWLGAALVFFGTLL 311 (330)
T ss_pred HHHH-----HHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHH------HHHHHHHHHHHHHH
Confidence 3222 224444333444433 33444556667788999999999999999999 99999999999988
Q ss_pred hhh
Q 017528 152 LAF 154 (370)
Q Consensus 152 i~~ 154 (370)
-..
T Consensus 312 fa~ 314 (330)
T KOG1583|consen 312 FAN 314 (330)
T ss_pred HHH
Confidence 664
No 128
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=60.78 E-value=25 Score=26.15 Aligned_cols=33 Identities=27% Similarity=0.402 Sum_probs=28.0
Q ss_pred HHHHHHHHHhcccchhhhHHHHHHHHHHHHHHh
Q 017528 295 FTTIASVFLLCEIITLGRILGGLLLIGGLYAVL 327 (370)
Q Consensus 295 ~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~ 327 (370)
+-+.++.+.++|++.+..+.|..++.+|+....
T Consensus 82 iFv~Fsvfyl~epl~~~~l~a~~~i~gav~fiF 114 (116)
T COG3169 82 IFVPFSVFYLKEPLRWNYLWAFLLILGAVYFIF 114 (116)
T ss_pred HHHHHHHHHHcCcchHHHHHHHHHHHHHHHHhc
Confidence 334578889999999999999999999988754
No 129
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=58.21 E-value=12 Score=29.36 Aligned_cols=11 Identities=18% Similarity=-0.016 Sum_probs=4.8
Q ss_pred HHHHHHHHHHH
Q 017528 314 LGGLLLIGGLY 324 (370)
Q Consensus 314 iG~~li~~g~~ 324 (370)
.|++++++.+.
T Consensus 75 aGvIg~Illi~ 85 (122)
T PF01102_consen 75 AGVIGIILLIS 85 (122)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 44444444333
No 130
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=55.77 E-value=22 Score=26.75 Aligned_cols=44 Identities=9% Similarity=0.018 Sum_probs=36.1
Q ss_pred eccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHhcCc
Q 017528 287 MSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLYAVLWGK 330 (370)
Q Consensus 287 ~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~l~~~~~ 330 (370)
...-.-.+.+.++.+++=|..|+.+.++|.++.++|+.+..+..
T Consensus 63 AYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~p 106 (109)
T COG1742 63 AYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFGP 106 (109)
T ss_pred HhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeCC
Confidence 34555677888899999999999999999999999987766553
No 131
>TIGR00836 amt ammonium transporter. The mechanism of energy coupling, if any, to methyl-NH2 or NH3 uptake by the AmtB protein of E. coli is not entirely clear. NH4+ uniport driven by the pmf, energy independent NH3 facilitation, and NH4+/K+ antiport have been proposed as possible transport mechanisms. In Corynebacterium glutamicum and Arabidopsis thaliana, uptake via the Amt1 homologues of AmtB has been reported to be driven by the pmf.
Probab=54.27 E-value=2.1e+02 Score=27.60 Aligned_cols=65 Identities=14% Similarity=0.153 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHHHHHHHH---HhccCceeEEeccchHHHHHHHHHHHHhccc---------------chhhhHHHHHH
Q 017528 257 AVAYCGIIVTALTYYLQAWV---IEKKGPVFLAMSTPLALIFTTIASVFLLCEI---------------ITLGRILGGLL 318 (370)
Q Consensus 257 ~l~~~g~~~~~~~~~~~~~a---~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~---------------~~~~~~iG~~l 318 (370)
.-+.+|+++..+++....+. ++.-++..+-.+=...=+++.+..-++-.+. .=..|++|++.
T Consensus 281 ~A~viG~iag~~~~~~~~~l~~~~~iDD~~~~~~vHg~~Gi~G~i~~glfa~~~~~~~~~g~~~~~~~~~l~~Ql~g~~~ 360 (403)
T TIGR00836 281 GAIIIGLVAGVLCYLAVSKLKKKLKIDDPLDAFAVHGVGGIWGLIATGLFAAPKVGGVGTGGLLGGNGKQLGVQLIGIAA 360 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCCcccchhhhhhHHHHHHHHHHhcccccccccCCccccCcHHHHHHHHHHHHH
Confidence 33445666666666555433 3344665555555555555555554443221 11247777777
Q ss_pred HHH
Q 017528 319 LIG 321 (370)
Q Consensus 319 i~~ 321 (370)
+++
T Consensus 361 ~~~ 363 (403)
T TIGR00836 361 IIA 363 (403)
T ss_pred HHH
Confidence 554
No 132
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=54.18 E-value=45 Score=25.20 Aligned_cols=48 Identities=17% Similarity=0.136 Sum_probs=34.1
Q ss_pred hhhHhhhc-cchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhc
Q 017528 102 ATLAAATT-NCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFY 155 (370)
Q Consensus 102 ~~~~~~i~-~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~ 155 (370)
.+.+-.-+ ....+...+..+++-+.++++. +++|..+|++|+.++.+.
T Consensus 57 ~GRvYAAYGGvyI~~sL~W~~~Vdg~~pdr~------D~~Ga~icl~G~~vil~~ 105 (109)
T COG1742 57 FGRVYAAYGGVYIAASLAWLWVVDGVRPDRY------DWIGAAICLAGVAVILFG 105 (109)
T ss_pred hhhHHHHhcchHHHHHHHHHHHHcCcCCcHH------HhhhHHHHHhceeeeEeC
Confidence 34444444 5566666777777766666666 999999999999888763
No 133
>PRK13108 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=51.72 E-value=2.5e+02 Score=27.66 Aligned_cols=23 Identities=13% Similarity=0.382 Sum_probs=19.1
Q ss_pred chhhhHHHHHHHHHHHHHHhcCc
Q 017528 308 ITLGRILGGLLLIGGLYAVLWGK 330 (370)
Q Consensus 308 ~~~~~~iG~~li~~g~~l~~~~~ 330 (370)
++..|++.+.++++|++++.+.+
T Consensus 254 l~~~Q~lSl~~il~gl~~~~~~~ 276 (460)
T PRK13108 254 IRINSFTSTFVFIGAVVYIILAP 276 (460)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhh
Confidence 68899999999999988776543
No 134
>PF08507 COPI_assoc: COPI associated protein; InterPro: IPR013714 Proteins in this family co-localise with COPI vesicle coat proteins []. In yeast it is a Golgi membrane protein involved in vesicular trafficking, interacting with TVP18 [].
Probab=51.46 E-value=31 Score=27.52 Aligned_cols=16 Identities=31% Similarity=0.573 Sum_probs=9.5
Q ss_pred hHHHHHHHHHHHHHHh
Q 017528 312 RILGGLLLIGGLYAVL 327 (370)
Q Consensus 312 ~~iG~~li~~g~~l~~ 327 (370)
.++|..+.+.|++...
T Consensus 89 ~i~g~~~~~~G~~~i~ 104 (136)
T PF08507_consen 89 IIIGLLLFLVGVIYII 104 (136)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3456666667766543
No 135
>PF15099 PIRT: Phosphoinositide-interacting protein family
Probab=50.67 E-value=8.6 Score=29.96 Aligned_cols=16 Identities=31% Similarity=0.692 Sum_probs=9.0
Q ss_pred HHHHHHHHHHHHHHHH
Q 017528 257 AVAYCGIIVTALTYYL 272 (370)
Q Consensus 257 ~l~~~g~~~~~~~~~~ 272 (370)
.+++.|+..++++|.+
T Consensus 58 vili~GvvvT~vays~ 73 (129)
T PF15099_consen 58 VILIAGVVVTAVAYSF 73 (129)
T ss_pred HHHHHhhHhheeeEee
Confidence 3445566666666553
No 136
>COG0004 AmtB Ammonia permease [Inorganic ion transport and metabolism]
Probab=49.68 E-value=1.8e+02 Score=27.96 Aligned_cols=243 Identities=12% Similarity=-0.064 Sum_probs=0.0
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCHHHHHHHHHHHHHHHHHH
Q 017528 10 QRPYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLAVEWKKAPPLSFLTFCKIFFLSLIGITFS 89 (370)
Q Consensus 10 ~~~~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 89 (370)
...+++...+.-.|+......+....+ +.--..+-.-..++.+......-.|...+..+.+++......+-..+- -.+
T Consensus 133 w~~~vY~p~ahWvWggggwl~~~g~~D-FAGgtVVHi~aG~aaLa~a~~lG~R~g~~~~~~~pHNl~~~~lGa~lL-WfG 210 (409)
T COG0004 133 WSTLVYPPVAHWVWGGGGWLALLGALD-FAGGTVVHINAGFAALAAALVLGKRIGGKPVAIPPHNLPLVVLGAALL-WFG 210 (409)
T ss_pred HHHHHhhhhheeEecCchHHHhcCcee-cCCCceEEechhHHHHHHHHHeecccCCCCCCCCCCchhHHHHHHHHH-HHH
Q ss_pred HHHHHHHHhhcChhhHhhhc-cchhHHHHHHHHHHhhccccccccCccchhhhHHHHHhhhhhhhhccCCcccccccccc
Q 017528 90 LDLYGIALIYTSATLAAATT-NCLPAITFFLAVLLRMEVLKLKTVPGVAKLVGILICIGGAATLAFYNGPQLRLLCHHHI 168 (370)
Q Consensus 90 ~~~~~~al~~~~~~~~~~i~-~~~pi~~~ll~~l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~~~~~~~~~~~~~~ 168 (370)
++.|+-+-....-..+.... ++...-..-.-...+-|.+..+|+-.....-|++..++++-=-.
T Consensus 211 WfGFN~GSal~~~~~a~~a~~nT~lAaa~g~l~w~~~e~~~~~Kp~~lg~~sG~vAGLVaITpaa--------------- 275 (409)
T COG0004 211 WFGFNAGSALAANGVAALAFVNTNLAAAAGALGWMLIEWLRNGKPSLLGAASGAVAGLVAITPAA--------------- 275 (409)
T ss_pred HccCCccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCchhhhhhHHHhHHHhcCCcc---------------
Q ss_pred ccCCCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHhcCCC----
Q 017528 169 FGHHNSQQIHGHVSSGKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIALERDP---- 244 (370)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---- 244 (370)
.--+..-..++.++++++.-...-..|+ ..+++|++-........+..-.+...++..+..
T Consensus 276 --------------g~V~p~~A~iiGii~g~i~~~a~~~lk~-~l~~DD~ld~f~vHGvgGi~G~i~~GiFa~~~~~~~~ 340 (409)
T COG0004 276 --------------GFVSPWGALIIGLIAGVICYFAVKLLKK-KLGVDDALDVFGVHGVGGIVGAILTGIFAAPAVGGGG 340 (409)
T ss_pred --------------cccCcHHHHHHHHHHHHHHHHHHHHHHH-hcCCCCcccceeccchhhHHHHHHHHHhcCccccccC
Q ss_pred ----cccccccchhhHHHHHHHHHHHHHHHHHHHHHHhccCceeEE
Q 017528 245 ----HEWVLGWNVRLLAVAYCGIIVTALTYYLQAWVIEKKGPVFLA 286 (370)
Q Consensus 245 ----~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~a~~~~~~~~~s 286 (370)
..+.+.. .+...+....+.+.++++..+ +.++.+...+++
T Consensus 341 G~~~~~~~~l~-~Q~~~v~~~~~~~~v~t~ii~-~vl~~~~gLRvs 384 (409)
T COG0004 341 GLFYGGGVQLG-VQLLGVLVTIVYAFVVTFIIL-KVLKLIIGLRVS 384 (409)
T ss_pred ccccccHHHHH-HHHHHHHHHHHHHHHHHHHHH-HHHHhccCCCCC
No 137
>PF15345 TMEM51: Transmembrane protein 51
Probab=46.47 E-value=22 Score=30.96 Aligned_cols=22 Identities=18% Similarity=0.264 Sum_probs=15.7
Q ss_pred HHHHHHHHHHHHHhcCcchhhh
Q 017528 314 LGGLLLIGGLYAVLWGKSKEQK 335 (370)
Q Consensus 314 iG~~li~~g~~l~~~~~~~~~~ 335 (370)
.|++|.++.+++..+.|+|++.
T Consensus 67 ~Gv~LLLLSICL~IR~KRr~rq 88 (233)
T PF15345_consen 67 SGVALLLLSICLSIRDKRRRRQ 88 (233)
T ss_pred HHHHHHHHHHHHHHHHHHHHhh
Confidence 5778888888888776665443
No 138
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=43.43 E-value=14 Score=29.64 Aligned_cols=18 Identities=11% Similarity=0.076 Sum_probs=10.4
Q ss_pred EeccchHHHHHHHHHHHH
Q 017528 286 AMSTPLALIFTTIASVFL 303 (370)
Q Consensus 286 s~~~~~~pi~~~~~~~~~ 303 (370)
+.+.|+.|+++++++.+.
T Consensus 78 A~LvYi~PL~~l~v~~~L 95 (150)
T COG3086 78 ALLVYIFPLVGLFLGAIL 95 (150)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 344556666666665544
No 139
>PF15102 TMEM154: TMEM154 protein family
Probab=40.77 E-value=24 Score=28.50 Aligned_cols=17 Identities=35% Similarity=0.417 Sum_probs=8.2
Q ss_pred HHHHHHHHHHHhcCcch
Q 017528 316 GLLLIGGLYAVLWGKSK 332 (370)
Q Consensus 316 ~~li~~g~~l~~~~~~~ 332 (370)
.+|++..++++.+.|||
T Consensus 69 vlLLl~vV~lv~~~kRk 85 (146)
T PF15102_consen 69 VLLLLSVVCLVIYYKRK 85 (146)
T ss_pred HHHHHHHHHheeEEeec
Confidence 34444555555544443
No 140
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=40.38 E-value=3.4e+02 Score=26.07 Aligned_cols=29 Identities=21% Similarity=0.092 Sum_probs=21.2
Q ss_pred hcccchhhhHHHHHHHHHHHHHHhcCcch
Q 017528 304 LCEIITLGRILGGLLLIGGLYAVLWGKSK 332 (370)
Q Consensus 304 ~~e~~~~~~~iG~~li~~g~~l~~~~~~~ 332 (370)
-+-.....-++|.++.+.+..+..+..++
T Consensus 360 ~~~g~~~~~~~~a~l~~~a~~~~~~~~~~ 388 (394)
T COG2814 360 DALGYAATGWVGAALLLLALLLALLSARK 388 (394)
T ss_pred HhhchHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 34456677888999999999888765443
No 141
>TIGR03644 marine_trans_1 probable ammonium transporter, marine subtype. Members of this protein family are well conserved subclass of putative ammonimum transporters, belonging to the much broader set of ammonium/methylammonium transporter described by TIGR00836. Species with this transporter tend to be marine bacteria. Partial phylogenetic profiling (PPP) picks a member of this protein family as the single best-scoring protein vs. a reference profile for the marine environment Genome Property for a large number of different query genomes. This finding by PPP suggests that this transporter family represents an important adaptation to the marine environment.
Probab=37.92 E-value=3.8e+02 Score=25.87 Aligned_cols=66 Identities=11% Similarity=0.096 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHHHH--HHHhccCceeEEeccchHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHH
Q 017528 259 AYCGIIVTALTYYLQA--WVIEKKGPVFLAMSTPLALIFTTIASVFLLCEIITLGRILGGLLLIGGLY 324 (370)
Q Consensus 259 ~~~g~~~~~~~~~~~~--~a~~~~~~~~~s~~~~~~pi~~~~~~~~~~~e~~~~~~~iG~~li~~g~~ 324 (370)
+.+|+++..+++.... +-+|.-++..+-.+=-..=+++.++.-++-++..-..|.+|++.+++=..
T Consensus 297 ~iiG~iag~v~~~~~~~~~~~~iDD~~~~~~vHg~~Gi~G~i~~glf~~~~~l~~Ql~g~~~~~~~~~ 364 (404)
T TIGR03644 297 TLIGAVGGVIVVFSIVLLDKLKIDDPVGAISVHGVAGIWGTLVVPITNGDASFGAQLIGAATIFAWVF 364 (404)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCcCchHhhhHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHH
Confidence 3445555555554442 22344566666665555556666666555444444568888777664433
No 142
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=37.85 E-value=3.5e+02 Score=25.45 Aligned_cols=10 Identities=20% Similarity=0.285 Sum_probs=4.0
Q ss_pred HHHHHHHHHH
Q 017528 262 GIIVTALTYY 271 (370)
Q Consensus 262 g~~~~~~~~~ 271 (370)
+.+..++++.
T Consensus 69 ~~~~~~~~~~ 78 (385)
T PF03547_consen 69 AFIIFILGLL 78 (385)
T ss_pred HHHHHHHHHH
Confidence 3333444443
No 143
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=37.00 E-value=2.6e+02 Score=23.70 Aligned_cols=105 Identities=9% Similarity=-0.004 Sum_probs=51.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhh-hhcccCCCCCHHHHHHHHHHHHHHHHHHH
Q 017528 12 PYLTVILIQAIYAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPISLA-VEWKKAPPLSFLTFCKIFFLSLIGITFSL 90 (370)
Q Consensus 12 ~~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 90 (370)
++++.=+.+++-|.+..+.+-+.. ++-+.....-.+.++.+....... +.+. .+.. +..+++.++..+.. .+-+
T Consensus 101 sLl~lg~~aLlsgitaff~~nA~~--~GlItlll~a~vgGfamy~my~y~yr~~a-d~sq-r~~~~K~~lv~~~s-m~lW 175 (226)
T COG4858 101 SLLFLGAMALLSGITAFFQKNAQV--YGLITLLLTAVVGGFAMYIMYYYAYRMRA-DNSQ-RPGTWKYLLVAVLS-MLLW 175 (226)
T ss_pred cHHHHHHHHHHHHHHHHHhcCCcc--hhHHHHHHHHHhhhHHHHHHHHHHHHhhc-cccc-CCchHHHHHHHHHH-HHHH
Confidence 445555556667777777775433 455555554444444444443332 1222 1111 22234444444444 4555
Q ss_pred HHHHHHHhhcChhhHhhhccchhHHHHHHHHHHh
Q 017528 91 DLYGIALIYTSATLAAATTNCLPAITFFLAVLLR 124 (370)
Q Consensus 91 ~~~~~al~~~~~~~~~~i~~~~pi~~~ll~~l~~ 124 (370)
.+.+.+-..+|++..- .+.|+-..+++.+.+
T Consensus 176 i~v~i~t~~lPtslN~---~L~pi~l~IiGav~l 206 (226)
T COG4858 176 IAVMIATVFLPTSLNP---QLPPIALTIIGAVIL 206 (226)
T ss_pred HHHHHHHhhCCCcCCc---CCchHHHHHHHHHHH
Confidence 5555666667665443 355555555554443
No 144
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=32.86 E-value=6.1e+02 Score=26.76 Aligned_cols=113 Identities=12% Similarity=-0.018 Sum_probs=56.4
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhhhhcccCCCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHh------hc----Chhh
Q 017528 38 MNNFVFIFYRQAFATLFVAPISLAVEWKKAPPL---SFLTFCKIFFLSLIGITFSLDLYGIALI------YT----SATL 104 (370)
Q Consensus 38 ~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~al~------~~----~~~~ 104 (370)
++|+++.+.-.+.-.. .+.+.+-.....+++. -.+.+......|.......+..|++++. .. +...
T Consensus 625 l~~~~il~~~l~~d~~-~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 703 (755)
T TIGR01647 625 FPPIMVVIIAILNDGT-IMTIAYDNVKPSKLPQRWNLREVFTMSTVLGIYLVISTFLLLAIALDTSFFIDKFGLQLLHGN 703 (755)
T ss_pred hhHHHHHHHHHHHhHh-HhhccCCCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhcccccccHhh
Confidence 6777766666665543 2211111111111111 1233444566666664555556656553 11 1223
Q ss_pred HhhhccchhHHHHHHHHHHhh-ccccccccCccchhhhHHHHHhhhhh
Q 017528 105 AAATTNCLPAITFFLAVLLRM-EVLKLKTVPGVAKLVGILICIGGAAT 151 (370)
Q Consensus 105 ~~~i~~~~pi~~~ll~~l~~~-e~~~~~~~~~~~~~~~i~l~~~Gv~l 151 (370)
......+.-+++-.+-.+..| ++..++++|++.-.++.++..+-..+
T Consensus 704 ~~t~~f~~~~~~~~~~~~~~r~~~~~~~~~p~~~l~~~~~~~~~~~~~ 751 (755)
T TIGR01647 704 LQSLIYLQVSISGQATIFVTRTHGFFWSERPGKLLFIAFVIAQIIATF 751 (755)
T ss_pred hHHHHHHHHHHHHHHHHheeccCCCCcccCCcHHHHHHHHHHHHHHHH
Confidence 334444444555555444444 66677888888877777666554443
No 145
>PF13038 DUF3899: Domain of unknown function (DUF3899)
Probab=32.53 E-value=32 Score=25.29 Aligned_cols=20 Identities=25% Similarity=0.408 Sum_probs=14.5
Q ss_pred hhhhHHHHHHHHHHHHHHhc
Q 017528 309 TLGRILGGLLLIGGLYAVLW 328 (370)
Q Consensus 309 ~~~~~iG~~li~~g~~l~~~ 328 (370)
+...++|..+.++|.++...
T Consensus 3 N~~Fl~~l~lliig~~~~v~ 22 (92)
T PF13038_consen 3 NILFLVGLILLIIGGFLFVF 22 (92)
T ss_pred hHHHHHHHHHHHHHHHHHHH
Confidence 44567888888888777653
No 146
>PF09656 PGPGW: Putative transmembrane protein (PGPGW); InterPro: IPR019099 This entry represents proteins that contain three predicted transmembrane helices and an unusual motif with consensus sequence PGPGW.
Probab=30.51 E-value=1.6e+02 Score=19.31 Aligned_cols=45 Identities=11% Similarity=0.276 Sum_probs=33.1
Q ss_pred hhhhHHHHHhhhhhhhhccCCccccccccccccCCCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 017528 138 KLVGILICIGGAATLAFYNGPQLRLLCHHHIFGHHNSQQIHGHVSSGKTWIKGCFIMLSSNTSFGLWLVLQGFVMKS 214 (370)
Q Consensus 138 ~~~~i~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~ 214 (370)
..+|..+.+.|++++..+ | .|.+..+++-...|......|+..+.
T Consensus 5 ~v~G~~lv~~Gii~~~lP-G-------------------------------pG~l~i~~GL~iLa~ef~wArr~l~~ 49 (53)
T PF09656_consen 5 GVLGWVLVVAGIIMLPLP-G-------------------------------PGLLVIFLGLAILATEFPWARRLLRR 49 (53)
T ss_pred hhHHHHHHHHHHHhhcCC-C-------------------------------CcHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 678888899999887764 2 25667777777788877777776554
No 147
>PRK12585 putative monovalent cation/H+ antiporter subunit G; Reviewed
Probab=29.94 E-value=3e+02 Score=23.41 Aligned_cols=18 Identities=11% Similarity=0.159 Sum_probs=10.9
Q ss_pred chHHHHHHHHHHHHHHHH
Q 017528 186 TWIKGCFIMLSSNTSFGL 203 (370)
Q Consensus 186 ~~~~G~~~~l~a~~~~a~ 203 (370)
...+|..+.+++.+.+..
T Consensus 43 a~TLGv~LILlgv~l~~~ 60 (197)
T PRK12585 43 SNTFGVSLLLFATVGYFF 60 (197)
T ss_pred chhhhHHHHHHHHHHHHH
Confidence 345677777766665543
No 148
>PF07444 Ycf66_N: Ycf66 protein N-terminus; InterPro: IPR010004 This entry represents Ycf66, a protein that is restricted to the chloroplasts of simple plants and algae. It is also found in the cyanobacteria. The function is unknown. As the family is exclusively found in phototrophic organisms it may play a role in photosynthesis.
Probab=29.86 E-value=46 Score=24.19 Aligned_cols=23 Identities=30% Similarity=0.395 Sum_probs=19.2
Q ss_pred cchhhhHHHHHHHHHHHHHHhcC
Q 017528 307 IITLGRILGGLLLIGGLYAVLWG 329 (370)
Q Consensus 307 ~~~~~~~iG~~li~~g~~l~~~~ 329 (370)
..++..++|.+++++|..++..+
T Consensus 4 ~~~~~~iLgi~l~~~~~~Ly~lr 26 (84)
T PF07444_consen 4 GFGPSYILGIILILGGLALYFLR 26 (84)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHH
Confidence 46788999999999999998643
No 149
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=29.72 E-value=1.6e+02 Score=22.45 Aligned_cols=9 Identities=0% Similarity=-0.112 Sum_probs=4.4
Q ss_pred HHHHHHHHH
Q 017528 294 IFTTIASVF 302 (370)
Q Consensus 294 i~~~~~~~~ 302 (370)
++++.++|+
T Consensus 57 lVGa~iG~l 65 (116)
T COG5336 57 LVGAGIGWL 65 (116)
T ss_pred HHHHHHHHH
Confidence 444455554
No 150
>PF08693 SKG6: Transmembrane alpha-helix domain; InterPro: IPR014805 SKG6 and AXL2 are membrane proteins that show polarised intracellular localisation [, ]. This entry represents the highly conserved transmembrane alpha-helical domain found in these proteins [, ]. The full-length AXL2 protein has a negative regulatory function in cytokinesis [].
Probab=28.49 E-value=43 Score=20.52 Aligned_cols=18 Identities=17% Similarity=0.672 Sum_probs=10.3
Q ss_pred HHHHHHHHHHHHHhcCcc
Q 017528 314 LGGLLLIGGLYAVLWGKS 331 (370)
Q Consensus 314 iG~~li~~g~~l~~~~~~ 331 (370)
+|.++++++.+++.|.++
T Consensus 21 V~vI~~vl~~~l~~~~rR 38 (40)
T PF08693_consen 21 VGVIIIVLGAFLFFWYRR 38 (40)
T ss_pred hHHHHHHHHHHhheEEec
Confidence 355566666666655443
No 151
>PF11044 TMEMspv1-c74-12: Plectrovirus spv1-c74 ORF 12 transmembrane protein; InterPro: IPR022743 This is a group of proteins expressed by Plectroviruses. The Plectroviruses are single-stranded DNA viruses belonging to the Inoviridae. This entry represents putative transmembrane proteins of unknown function.
Probab=28.27 E-value=29 Score=21.54 Aligned_cols=18 Identities=22% Similarity=0.277 Sum_probs=9.3
Q ss_pred chhhhHHHHHHHHHHHHH
Q 017528 308 ITLGRILGGLLLIGGLYA 325 (370)
Q Consensus 308 ~~~~~~iG~~li~~g~~l 325 (370)
|+|...+=.++|++|++.
T Consensus 2 p~wlt~iFsvvIil~If~ 19 (49)
T PF11044_consen 2 PTWLTTIFSVVIILGIFA 19 (49)
T ss_pred chHHHHHHHHHHHHHHHH
Confidence 345555555555555543
No 152
>PRK06638 NADH:ubiquinone oxidoreductase subunit J; Provisional
Probab=27.66 E-value=3.9e+02 Score=22.83 Aligned_cols=26 Identities=19% Similarity=0.239 Sum_probs=18.3
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhhhh
Q 017528 38 MNNFVFIFYRQAFATLFVAPISLAVE 63 (370)
Q Consensus 38 ~~~~~~~~~r~~~~~l~l~~~~~~~~ 63 (370)
+...++..+-..+..+++..+++...
T Consensus 54 la~~qIiVYvGAI~VLflFvIMll~~ 79 (198)
T PRK06638 54 LGVVQIIVYVGAVMVLFLFVVMMLDV 79 (198)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 56677777777777777777777643
No 153
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=27.50 E-value=5.7e+02 Score=24.71 Aligned_cols=19 Identities=16% Similarity=0.048 Sum_probs=14.9
Q ss_pred hhhHHHHHHHHHHHHHHhc
Q 017528 310 LGRILGGLLLIGGLYAVLW 328 (370)
Q Consensus 310 ~~~~iG~~li~~g~~l~~~ 328 (370)
.+..++.++++++++++..
T Consensus 184 ~yF~~s~~~~llC~i~y~~ 202 (406)
T KOG1479|consen 184 IYFITSTVILLLCFVLYLV 202 (406)
T ss_pred hhHHHHHHHHHHHHHHHHH
Confidence 5677788888888888873
No 154
>PF10754 DUF2569: Protein of unknown function (DUF2569); InterPro: IPR019690 This entry represents a protein that is conserved in bacteria. The function is not known, but several members are annotated as being YdgK or a homologue thereof and associated to the inner membrane. This signature also matches proteins that are described as transglutaminase-like enzymes, although this could not be confirmed.
Probab=26.98 E-value=2.6e+02 Score=22.54 Aligned_cols=31 Identities=10% Similarity=0.036 Sum_probs=25.3
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 017528 184 GKTWIKGCFIMLSSNTSFGLWLVLQGFVMKS 214 (370)
Q Consensus 184 ~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~ 214 (370)
+.+...+.+..++++..|.-|...+||..+.
T Consensus 116 d~~~i~~l~~~li~a~IwipYf~~S~RVK~T 146 (149)
T PF10754_consen 116 DAEAIRELLRSLIAAAIWIPYFLRSKRVKNT 146 (149)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhHHhhhh
Confidence 3445678888999999999999999997654
No 155
>PF15471 TMEM171: Transmembrane protein family 171
Probab=26.08 E-value=68 Score=28.69 Aligned_cols=20 Identities=25% Similarity=0.376 Sum_probs=16.1
Q ss_pred hhhHHHHHHHHHHHHHHhcC
Q 017528 310 LGRILGGLLLIGGLYAVLWG 329 (370)
Q Consensus 310 ~~~~iG~~li~~g~~l~~~~ 329 (370)
..|+.|-.++++|+..+...
T Consensus 161 slQImGPlIVl~GLCFFVVA 180 (319)
T PF15471_consen 161 SLQIMGPLIVLVGLCFFVVA 180 (319)
T ss_pred ehhhhhhHHHHHhhhhhhee
Confidence 56889999999998877644
No 156
>PF11381 DUF3185: Protein of unknown function (DUF3185); InterPro: IPR021521 Some members in this bacterial family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=25.80 E-value=53 Score=22.10 Aligned_cols=18 Identities=39% Similarity=0.720 Sum_probs=14.5
Q ss_pred hhhhHHHHHhhhhhhhhc
Q 017528 138 KLVGILICIGGAATLAFY 155 (370)
Q Consensus 138 ~~~~i~l~~~Gv~li~~~ 155 (370)
|++++++.+.|++++.+.
T Consensus 1 kiigi~Llv~GivLl~~G 18 (59)
T PF11381_consen 1 KIIGIALLVGGIVLLYFG 18 (59)
T ss_pred CeeeehHHHHHHHHHHhh
Confidence 467888999999988863
No 157
>PF12868 DUF3824: Domain of unknwon function (DUF3824); InterPro: IPR024436 This repeating domain is proline-rich but its function is unknown.
Probab=24.56 E-value=94 Score=24.92 Aligned_cols=11 Identities=18% Similarity=0.244 Sum_probs=5.0
Q ss_pred HHHHHHHHHHH
Q 017528 313 ILGGLLLIGGL 323 (370)
Q Consensus 313 ~iG~~li~~g~ 323 (370)
+.++.|..+|+
T Consensus 9 la~~aLaAAG~ 19 (137)
T PF12868_consen 9 LAEAALAAAGA 19 (137)
T ss_pred HhHHHHHHHHH
Confidence 34444444443
No 158
>PRK10666 ammonium transporter; Provisional
Probab=24.54 E-value=6.6e+02 Score=24.47 Aligned_cols=52 Identities=4% Similarity=-0.212 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHHh
Q 017528 188 IKGCFIMLSSNTSFGLWLVLQGFVMKSYPSKLLFTTLQCFLSSIQSFAIAIAL 240 (370)
Q Consensus 188 ~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 240 (370)
.-..++..++++..-......|+. .+.+||.-........+.+-.+...++.
T Consensus 304 ~~A~iiG~vag~v~~~~~~~l~~~-~~iDD~~~a~~vHgv~Gi~G~l~~glfa 355 (428)
T PRK10666 304 GGALIIGVVAGLAGLWGVTMLKRW-LRVDDPCDVFGVHGVCGIVGCILTGIFA 355 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCcCccHhhhHhHHHHHHHHHHhh
Confidence 344555555555443333233331 2455777777766666666555555554
No 159
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=24.24 E-value=6.5e+02 Score=24.29 Aligned_cols=8 Identities=38% Similarity=0.605 Sum_probs=3.0
Q ss_pred hHHHHHhh
Q 017528 141 GILICIGG 148 (370)
Q Consensus 141 ~i~l~~~G 148 (370)
+..+++.|
T Consensus 279 g~~~~~~~ 286 (455)
T TIGR00892 279 AFLLSIIG 286 (455)
T ss_pred HHHHHHHH
Confidence 33333333
No 160
>TIGR01167 LPXTG_anchor LPXTG-motif cell wall anchor domain. A common feature of this proteins containing this domain appears to be a high proportion of charged and zwitterionic residues immediatedly upstream of the LPXTG motif. This model differs from other descriptions of the LPXTG region by including a portion of that upstream charged region.
Probab=24.20 E-value=1.1e+02 Score=17.36 Aligned_cols=13 Identities=46% Similarity=0.283 Sum_probs=6.7
Q ss_pred hhhhHHHHHHHHH
Q 017528 309 TLGRILGGLLLIG 321 (370)
Q Consensus 309 ~~~~~iG~~li~~ 321 (370)
....++|.+++..
T Consensus 11 ~~~~~~G~~l~~~ 23 (34)
T TIGR01167 11 SLLLLLGLLLLGL 23 (34)
T ss_pred HHHHHHHHHHHHH
Confidence 4455666644444
No 161
>PF13994 PgaD: PgaD-like protein
Probab=24.13 E-value=2e+02 Score=22.98 Aligned_cols=23 Identities=22% Similarity=0.355 Sum_probs=13.1
Q ss_pred hhhHHHHHHHHHHHHHHhcCcch
Q 017528 310 LGRILGGLLLIGGLYAVLWGKSK 332 (370)
Q Consensus 310 ~~~~iG~~li~~g~~l~~~~~~~ 332 (370)
..+.-..++++.++++..|.+..
T Consensus 63 ~l~~y~~i~~~~a~~Li~Wa~yn 85 (138)
T PF13994_consen 63 TLQIYLLIALVNAVILILWAKYN 85 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444555666666666676543
No 162
>PF04550 Phage_holin_2: Phage holin family 2 ; InterPro: IPR007633 This entry represents the Bacteriophage P2, GpY, holin protein. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This protein family represent one of a large number of mutually dissimilar families of phage holins. It is thought that the temporal precision of holin-mediated lysis may occur through the build-up of a holin oligomer which causes the lysis [].
Probab=24.08 E-value=2.9e+02 Score=20.21 Aligned_cols=34 Identities=26% Similarity=0.306 Sum_probs=18.8
Q ss_pred HHhhccccccccCccchhhhHHHHHhhhhhhhhc
Q 017528 122 LLRMEVLKLKTVPGVAKLVGILICIGGAATLAFY 155 (370)
Q Consensus 122 l~~~e~~~~~~~~~~~~~~~i~l~~~Gv~li~~~ 155 (370)
+.-+|+++++...++.-+-+..-...|++++-++
T Consensus 24 L~s~Epit~RL~iGR~ilGs~~S~~Aga~Li~~P 57 (89)
T PF04550_consen 24 LASNEPITLRLFIGRVILGSAVSVVAGAALIQFP 57 (89)
T ss_pred HccCCCCchhHHhHHHHHhhHHHHHHHHHHhcCC
Confidence 4446888888444444444444445555665543
No 163
>PF04246 RseC_MucC: Positive regulator of sigma(E), RseC/MucC; InterPro: IPR007359 This bacterial family of integral membrane proteins represents a positive regulator of the sigma(E) transcription factor, namely RseC/MucC. The sigma(E) transcription factor is up-regulated by cell envelope protein misfolding, and regulates the expression of genes that are collectively termed ECF (devoted to Extra-Cellular Functions) []. In Pseudomonas aeruginosa, derepression of sigma(E) is associated with the alginate-overproducing phenotype characteristic of chronic respiratory tract colonization in cystic fibrosis patients. The mechanism by which RseC/MucC positively regulates the sigma(E) transcription factor is unknown. RseC is also thought to have a role in thiamine biosynthesis in Salmonella typhimurium []. In addition, this family also includes an N-terminal part of RnfF, a Rhodobacter capsulatus protein, of unknown function, that is essential for nitrogen fixation. This protein also contains a domain found in ApbE protein IPR003374 from INTERPRO, which is itself involved in thiamine biosynthesis.
Probab=24.07 E-value=44 Score=26.56 Aligned_cols=15 Identities=20% Similarity=0.144 Sum_probs=7.8
Q ss_pred ccchHHHHHHHHHHH
Q 017528 288 STPLALIFTTIASVF 302 (370)
Q Consensus 288 ~~~~~pi~~~~~~~~ 302 (370)
+.|+-|++.++.+.+
T Consensus 73 l~Y~lPll~li~g~~ 87 (135)
T PF04246_consen 73 LVYLLPLLALIAGAV 87 (135)
T ss_pred HHHHHHHHHHHHHHH
Confidence 344455555555554
No 164
>KOG3817 consensus Uncharacterized conserved protein [Function unknown]
Probab=22.30 E-value=5.3e+02 Score=24.37 Aligned_cols=82 Identities=15% Similarity=0.099 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHH--hhhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 017528 23 YAGMFLLSKAAFNGGMNNFVFIFYRQAFATLFVAPIS--LAVEWKKAPPLSFLTFCKIFFLSLIGITFSLDLYGIALIYT 100 (370)
Q Consensus 23 ~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~ 100 (370)
|+.+..+.+.+.++ ...+......++.+-+....++ ..-.|...++-++.+-...+.+-+++ ..+.|.+.+..
T Consensus 201 Ws~slY~i~ql~~n-Lq~Iwieyr~yvLgYvlivgliSfaVCYK~GPp~d~RS~~ilmWtLqli~----lvl~Yfsvq~p 275 (452)
T KOG3817|consen 201 WSISLYVIKQLADN-LQLIWIEYRDYVLGYVLIVGLISFAVCYKIGPPKDPRSQTILMWTLQLIG----LVLAYFSVQHP 275 (452)
T ss_pred chhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCcchhhHHHHHHHHHH----HHHHHHhcccH
Confidence 77788888888885 7777777777766644332221 11123323322233333333333333 22335788888
Q ss_pred ChhhHhhhc
Q 017528 101 SATLAAATT 109 (370)
Q Consensus 101 ~~~~~~~i~ 109 (370)
.++.+.+|.
T Consensus 276 ~~a~A~iI~ 284 (452)
T KOG3817|consen 276 SAAIAAIIM 284 (452)
T ss_pred HHHHHHHHH
Confidence 777766554
No 165
>TIGR00893 2A0114 d-galactonate transporter.
Probab=22.25 E-value=5.9e+02 Score=23.08 Aligned_cols=15 Identities=7% Similarity=0.335 Sum_probs=5.9
Q ss_pred HHHHHHHHHHHhhcC
Q 017528 201 FGLWLVLQGFVMKSY 215 (370)
Q Consensus 201 ~a~~~v~~~~~~~~~ 215 (370)
..+......+..++.
T Consensus 42 ~~~~~~~~g~l~d~~ 56 (399)
T TIGR00893 42 YVVGQFPGGWLLDRF 56 (399)
T ss_pred HHHHHHhHHHHHHhc
Confidence 333333334444443
No 166
>COG1007 NuoN NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]
Probab=22.12 E-value=7.8e+02 Score=24.38 Aligned_cols=25 Identities=20% Similarity=0.294 Sum_probs=20.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHh
Q 017528 254 RLLAVAYCGIIVTALTYYLQAWVIE 278 (370)
Q Consensus 254 ~~~~l~~~g~~~~~~~~~~~~~a~~ 278 (370)
..+++..++++.++++-+.|.+.++
T Consensus 398 ~~~~Laii~vl~S~isa~YYlRvv~ 422 (475)
T COG1007 398 GLWWLAVIAVLNSAISAYYYLRVVK 422 (475)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3567888899999999998888876
No 167
>PF05545 FixQ: Cbb3-type cytochrome oxidase component FixQ; InterPro: IPR008621 This family consists of several Cbb3-type cytochrome oxidase components (FixQ/CcoQ). FixQ is found in nitrogen fixing bacteria. Since nitrogen fixation is an energy-consuming process, effective symbioses depend on operation of a respiratory chain with a high affinity for O2, closely coupled to ATP production. This requirement is fulfilled by a special three-subunit terminal oxidase (cytochrome terminal oxidase cbb3), which was first identified in Bradyrhizobium japonicum as the product of the fixNOQP operon [].
Probab=22.05 E-value=95 Score=19.71 Aligned_cols=17 Identities=6% Similarity=0.079 Sum_probs=9.9
Q ss_pred HHHHHHHHHHHhcCcch
Q 017528 316 GLLLIGGLYAVLWGKSK 332 (370)
Q Consensus 316 ~~li~~g~~l~~~~~~~ 332 (370)
..++++|+++..+.+++
T Consensus 18 ~~~~F~gi~~w~~~~~~ 34 (49)
T PF05545_consen 18 FFVFFIGIVIWAYRPRN 34 (49)
T ss_pred HHHHHHHHHHHHHcccc
Confidence 44555676666665544
No 168
>PF15108 TMEM37: Voltage-dependent calcium channel gamma-like subunit protein family
Probab=21.47 E-value=3.7e+02 Score=22.06 Aligned_cols=51 Identities=16% Similarity=0.117 Sum_probs=31.8
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCC--CchhHHHHHHHHHHHHH
Q 017528 183 SGKTWIKGCFIMLSSNTSFGLWLVLQGFVMKSYP--SKLLFTTLQCFLSSIQS 233 (370)
Q Consensus 183 ~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~--~~~~~~~~~~~~~~i~~ 233 (370)
+...|..|..+.+++.+..+.....--.+.++.- ...++++|.-+.+..+.
T Consensus 116 SrrKWamGs~LlLvsfvlSs~GllsFviLL~~~vtl~GFTL~fWCeFtAsFLf 168 (184)
T PF15108_consen 116 SRRKWAMGSVLLLVSFVLSSGGLLSFVILLRNQVTLIGFTLMFWCEFTASFLF 168 (184)
T ss_pred hhhhhhhhhHHHHHHHHHhcccHHHHHHHHhcchhhhhhHHHHHHHHHHHHHH
Confidence 4556778999988888777765554444444322 22567777666666544
No 169
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=21.07 E-value=7.7e+02 Score=23.97 Aligned_cols=14 Identities=14% Similarity=0.347 Sum_probs=6.2
Q ss_pred HHHHHHHHHHHHHH
Q 017528 313 ILGGLLLIGGLYAV 326 (370)
Q Consensus 313 ~iG~~li~~g~~l~ 326 (370)
+.|+.+++.+++..
T Consensus 417 ~~~~~~~i~~~~~~ 430 (476)
T PLN00028 417 LMGVMIIACTLPVA 430 (476)
T ss_pred HHHHHHHHHHHHHH
Confidence 33444444444443
No 170
>KOG1623 consensus Multitransmembrane protein [General function prediction only]
Probab=20.97 E-value=5.6e+02 Score=22.80 Aligned_cols=29 Identities=17% Similarity=0.108 Sum_probs=21.0
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 017528 186 TWIKGCFIMLSSNTSFGLWLVLQGFVMKS 214 (370)
Q Consensus 186 ~~~~G~~~~l~a~~~~a~~~v~~~~~~~~ 214 (370)
....|..++.+....||.=....|+..+.
T Consensus 125 ~~~lG~vc~~~nI~~~~sPL~~m~~VIkt 153 (243)
T KOG1623|consen 125 VSVLGIVCAVFNISMFAAPLSVIRKVIKT 153 (243)
T ss_pred eeeeehhhhhhhHHhhhccHHhhhhheec
Confidence 34578888888888888776666666554
No 171
>PF11139 DUF2910: Protein of unknown function (DUF2910); InterPro: IPR021315 Some members in this bacterial family annotate the proteins as cytochrome C biogenesis proteins however this cannot be confirmed. Currently no function for this family is known.
Probab=20.95 E-value=5.4e+02 Score=22.06 Aligned_cols=44 Identities=25% Similarity=0.285 Sum_probs=32.0
Q ss_pred cchhHHHHHHHHHHhhccc-------cccccCccchhhhHHHHHhhhhhhh
Q 017528 110 NCLPAITFFLAVLLRMEVL-------KLKTVPGVAKLVGILICIGGAATLA 153 (370)
Q Consensus 110 ~~~pi~~~ll~~l~~~e~~-------~~~~~~~~~~~~~i~l~~~Gv~li~ 153 (370)
...|+...++.+.+.+||. +.+-+-|..+..+.++.++|+.++.
T Consensus 160 ~~~~~~~pll~~~~~~~r~~~~l~r~~~wl~~~~~~i~~~i~~i~G~~l~~ 210 (214)
T PF11139_consen 160 ASLPALLPLLAYLVAPERAEPWLERLRSWLRRHSRQILAVILLIVGALLLG 210 (214)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHH
Confidence 6678888888888887654 2233345557888899999998875
No 172
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=20.90 E-value=5.3e+02 Score=22.02 Aligned_cols=13 Identities=23% Similarity=0.335 Sum_probs=6.1
Q ss_pred hhhHHHHHhhhhh
Q 017528 139 LVGILICIGGAAT 151 (370)
Q Consensus 139 ~~~i~l~~~Gv~l 151 (370)
+.++...+.|+.-
T Consensus 89 ~~~if~~~~gi~~ 101 (206)
T PF06570_consen 89 FFGIFSLLFGIMG 101 (206)
T ss_pred HHHHHHHHHHHHH
Confidence 3344445555444
Done!