Your job contains 1 sequence.
>017532
MTESPPVCQNPSRFTDPLTNAFGSLNDLVPDLASLQDLATRGSWRTIIDNVSRARSQSLL
TQPHHHLTYLAYNTLALMKLRRFDEAQQELDSLEDFNSSGYQYETYPHIYPNRTGSMVPF
SLRWLYAVLPIKLSNRQVGLDRFYELLDFVREKLARKLAEKLEESVKSWKKREIFVLNCL
IGYHLSSKEYNVCFDLMNESIGRGNGLDPILVSKLGFIQMQVGDLEGAKKSFNRVEEMLN
EGKFEDGLLSEVEFRNLVSRNKALIYLVGKDYVSAVREYEECIERDYNDIVAINNKALCL
MYLRDLSDSIKVLENALERVPTVALNETLVVNLCSMYELAYVNHSDIKRTLSSWIGRVAP
DDFDSSCTRI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 017532
(370 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2135227 - symbol:AT4G39820 species:3702 "Arabi... 1277 3.5e-130 1
MGI|MGI:2445089 - symbol:Trappc12 "trafficking protein pa... 371 3.2e-33 1
UNIPROTKB|Q8WVT3 - symbol:TRAPPC12 "Trafficking protein p... 366 8.7e-33 1
ZFIN|ZDB-GENE-070112-1282 - symbol:trappc12 "trafficking ... 337 1.3e-29 1
DICTYBASE|DDB_G0281351 - symbol:DDB_G0281351 species:4468... 173 6.3e-29 3
>TAIR|locus:2135227 [details] [associations]
symbol:AT4G39820 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR013026 PROSITE:PS50293 EMBL:CP002687 Gene3D:1.25.40.10
EMBL:BT015781 IPI:IPI00537924 RefSeq:NP_195692.2 UniGene:At.2300
ProteinModelPortal:Q5XF35 SMR:Q5XF35 IntAct:Q5XF35 PRIDE:Q5XF35
EnsemblPlants:AT4G39820.1 GeneID:830141 KEGG:ath:AT4G39820
OMA:CSMYELA ProtClustDB:CLSN2681018 Genevestigator:Q5XF35
Uniprot:Q5XF35
Length = 408
Score = 1277 (454.6 bits), Expect = 3.5e-130, P = 3.5e-130
Identities = 236/349 (67%), Positives = 294/349 (84%)
Query: 22 FGSLNDLVPDLASLQDLATRGSWRTIIDNVSRARSQSLLTQPHHHLTYLAYNTLALMKLR 81
F SL++L DL SL +L+TRGSW+ I++ +S+AR+ LLT+PH HLTYL Y +AL KLR
Sbjct: 62 FNSLDELTHDLGSLHELSTRGSWQAILEKISQARALFLLTKPHEHLTYLTYQVMALAKLR 121
Query: 82 RFDEAQQELDSLEDFNSSGYQYETYPHIYPNRTGSMVPFSLRWLYAVLPIKLSNRQVGLD 141
R DEA EL+SL DF+ + Y+YE++P IYPNR GSMVPFSLRWLYA++P KL NRQ GLD
Sbjct: 122 RSDEASHELNSLHDFDGTHYRYESFPEIYPNRRGSMVPFSLRWLYALIPTKLGNRQEGLD 181
Query: 142 RFYELLDFVREKLARKLAEKLEESVKSWKKREIFVLNCLIGYHLSSKEYNVCFDLMNESI 201
R Y LLDFVR+++ K ++ LE SV+ WKKRE FV+NCL+G+HL KE+ V DLM E I
Sbjct: 182 RLYVLLDFVRDRIREKESQSLESSVELWKKRETFVMNCLLGFHLGHKEFGVSLDLMKELI 241
Query: 202 GRGNGLDPILVSKLGFIQMQVGDLEGAKKSFNRVEEMLNEGKFEDGLLSEVEFRNLVSRN 261
R + LDP+L+SKLG +QMQ GD+EGAK +F+RVE+MLNEGK +GLL+E++F NLV RN
Sbjct: 242 NR-DPLDPVLISKLGSVQMQFGDVEGAKTTFDRVEKMLNEGK-SNGLLNEIQFNNLVGRN 299
Query: 262 KALIYLVGKDYVSAVREYEECIERDYNDIVAINNKALCLMYLRDLSDSIKVLENALERVP 321
KAL+Y+V KDYVSAVREY++CIERD +DI+A+NNKALCLMYLRDLSD+IKV+E+ALERVP
Sbjct: 300 KALVYVVAKDYVSAVREYDKCIERDNSDIIAVNNKALCLMYLRDLSDAIKVMESALERVP 359
Query: 322 TVALNETLVVNLCSMYELAYVNHSDIKRTLSSWIGRVAPDDFDSSCTRI 370
T ALNE+LVVNLCSMYELAYVNH+D+KRTL++WI RVAPDDFDSSCTR+
Sbjct: 360 TAALNESLVVNLCSMYELAYVNHTDVKRTLNNWIARVAPDDFDSSCTRV 408
>MGI|MGI:2445089 [details] [associations]
symbol:Trappc12 "trafficking protein particle complex 12"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0006810 "transport" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
MGI:MGI:2445089 GO:GO:0016192 Gene3D:1.25.40.10 GO:GO:0005793
CTD:51112 eggNOG:NOG239420 HOGENOM:HOG000154703 HOVERGEN:HBG068968
OMA:HMMESVL OrthoDB:EOG4B5P4X EMBL:AC136986 EMBL:BC024077
EMBL:BC030887 EMBL:AK049172 IPI:IPI00322302 RefSeq:NP_001154882.1
RefSeq:NP_848926.3 UniGene:Mm.132006 ProteinModelPortal:Q8K2L8
SMR:Q8K2L8 PhosphoSite:Q8K2L8 PaxDb:Q8K2L8 PRIDE:Q8K2L8
Ensembl:ENSMUST00000020954 Ensembl:ENSMUST00000168129 GeneID:217449
KEGG:mmu:217449 UCSC:uc007nfw.2 GeneTree:ENSGT00390000002448
InParanoid:Q8K2L8 NextBio:375861 Bgee:Q8K2L8 CleanEx:MM_TTC15
Genevestigator:Q8K2L8 GermOnline:ENSMUSG00000020628 Uniprot:Q8K2L8
Length = 797
Score = 371 (135.7 bits), Expect = 3.2e-33, P = 3.2e-33
Identities = 113/358 (31%), Positives = 177/358 (49%)
Query: 35 LQDLATRGSWRTIIDNVSR---ARSQSLLTQ--PHHHLT---YLAYNTLALM-KLRRFDE 85
L+ L + +WR +D R A Q P H T L + LAL+ KL F
Sbjct: 446 LKQLISCRNWRAAVDLCGRLLTAHGQGYGKNGLPTSHTTDSLQLWFVRLALLVKLGLFQN 505
Query: 86 AQQELDSLEDFNSSGYQYETYPHIYPNRTGSMVPFSLRWLYAVLPIKLSNRQVGLDRFYE 145
A+ E + + + YE YPH+YP R GSMVPFS+R L+A L L N Q LDR +
Sbjct: 506 AEMEFEPFGNLDQPDLYYEYYPHVYPGRRGSMVPFSMRILHAELQQYLGNPQESLDRLHR 565
Query: 146 LLDFVREKLA---RKLAE----------KLEESVKSWKKREIFVLNCLIGYHLSSKEYNV 192
+ + LA + LAE + SV+ W+ R VL + L K+Y +
Sbjct: 566 VKTVCSKILANLEQGLAEDGGLSSVTQESRQASVQLWRSRLGRVLYSMANCLLLMKDYVL 625
Query: 193 CFDLMNESIGRGNGLDPILVSKLGFIQMQVGDLEGAKKSFNRVEEMLNEGKFEDGLLSEV 252
D I +P L+S +G I +Q+GD++ A+K F VE++ + DGL ++
Sbjct: 626 AVDAYLTVIKYYPEQEPQLLSGIGRILLQIGDIKTAEKYFQDVEKVTQK---LDGLQGKI 682
Query: 253 EFRNLVSRNKALIYLVGKDYVSAVREYEECIERDYNDIVAINNKALCLMYLRDLSDSIKV 312
+V N+A +YL ++ A + + E + D + VA NN A+CL+YL L DS++
Sbjct: 683 ----MVLMNRAFLYLGQNNFAEAHKFFTEILRMDPTNAVANNNAAVCLLYLGKLKDSLRQ 738
Query: 313 LENALERVPTVALNETLVVNLCSMYELAYVNHSDIKRTLSSWIGRVAPDDFDSSCTRI 370
LE +++ P L+E+++ NL +MYEL K++L + D F++ C ++
Sbjct: 739 LEAMVQQDPRHYLHESVLFNLTTMYELESSRSMQKKQSLLEAVASKEGDSFNTQCLKL 796
>UNIPROTKB|Q8WVT3 [details] [associations]
symbol:TRAPPC12 "Trafficking protein particle complex
subunit 12" species:9606 "Homo sapiens" [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0005793 "endoplasmic
reticulum-Golgi intermediate compartment" evidence=IEA]
InterPro:IPR001440 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF00515 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 EMBL:CH471053 GO:GO:0016192 Gene3D:1.25.40.10
GO:GO:0005793 EMBL:AK098327 EMBL:BC014164 EMBL:BC017475
EMBL:AF151845 IPI:IPI00152685 RefSeq:NP_057114.5 UniGene:Hs.252713
ProteinModelPortal:Q8WVT3 SMR:Q8WVT3 DIP:DIP-48283N IntAct:Q8WVT3
PhosphoSite:Q8WVT3 DMDM:116242834 PaxDb:Q8WVT3 PRIDE:Q8WVT3
DNASU:51112 Ensembl:ENST00000324266 Ensembl:ENST00000382110
GeneID:51112 KEGG:hsa:51112 UCSC:uc002qxm.1 CTD:51112
GeneCards:GC02P003383 HGNC:HGNC:24284 HPA:HPA034799 MIM:614139
neXtProt:NX_Q8WVT3 PharmGKB:PA134944710 eggNOG:NOG239420
HOGENOM:HOG000154703 HOVERGEN:HBG068968 InParanoid:Q8WVT3
OMA:HMMESVL OrthoDB:EOG4B5P4X PhylomeDB:Q8WVT3 ChiTaRS:TRAPPC12
GenomeRNAi:51112 NextBio:53871 ArrayExpress:Q8WVT3 Bgee:Q8WVT3
CleanEx:HS_TTC15 Genevestigator:Q8WVT3 GermOnline:ENSG00000171853
Uniprot:Q8WVT3
Length = 735
Score = 366 (133.9 bits), Expect = 8.7e-33, P = 8.7e-33
Identities = 111/358 (31%), Positives = 178/358 (49%)
Query: 35 LQDLATRGSWRTIIDNVSR---ARSQS-----LLTQPHHHLTYLAYNTLALM-KLRRFDE 85
L+ L + +WR +D R A Q LLT L + LAL+ KL F
Sbjct: 384 LKQLISCRNWRAAVDLCGRLLTAHGQGYGKSGLLTSHTTDSLQLWFVRLALLVKLGLFQN 443
Query: 86 AQQELDSLEDFNSSGYQYETYPHIYPNRTGSMVPFSLRWLYAVLPIKLSNRQVGLDRFYE 145
A+ E + + + YE YPH+YP R GSMVPFS+R L+A L L N Q LDR ++
Sbjct: 444 AEMEFEPFGNLDQPDLYYEYYPHVYPGRRGSMVPFSMRILHAELQQYLGNPQESLDRLHK 503
Query: 146 LLDFVREKLA---RKLAEK------LEE----SVKSWKKREIFVLNCLIGYHLSSKEYNV 192
+ + LA + LAE +E S++ W+ R V+ + L K+Y +
Sbjct: 504 VKTVCSKILANLEQGLAEDGGMSSVTQEGRQASIRLWRSRLGRVMYSMANCLLLMKDYVL 563
Query: 193 CFDLMNESIGRGNGLDPILVSKLGFIQMQVGDLEGAKKSFNRVEEMLNEGKFEDGLLSEV 252
+ + I +P L+S +G I +Q+GD++ A+K F VE++ + DGL ++
Sbjct: 564 AVEAYHSVIKYYPEQEPQLLSGIGRISLQIGDIKTAEKYFQDVEKVTQK---LDGLQGKI 620
Query: 253 EFRNLVSRNKALIYLVGKDYVSAVREYEECIERDYNDIVAINNKALCLMYLRDLSDSIKV 312
+V N A ++L ++ A R + E + D + VA NN A+CL+YL L DS++
Sbjct: 621 ----MVLMNSAFLHLGQNNFAEAHRFFTEILRMDPRNAVANNNAAVCLLYLGKLKDSLRQ 676
Query: 313 LENALERVPTVALNETLVVNLCSMYELAYVNHSDIKRTLSSWIGRVAPDDFDSSCTRI 370
LE +++ P L+E+++ NL +MYEL K+ L + D F++ C ++
Sbjct: 677 LEAMVQQDPRHYLHESVLFNLTTMYELESSRSMQKKQALLEAVAGKEGDSFNTQCLKL 734
>ZFIN|ZDB-GENE-070112-1282 [details] [associations]
symbol:trappc12 "trafficking protein particle
complex 12" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001440 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 PROSITE:PS50005
PROSITE:PS50293 SMART:SM00028 ZFIN:ZDB-GENE-070112-1282
Gene3D:1.25.40.10 GeneTree:ENSGT00390000002448 EMBL:CABZ01067329
EMBL:CABZ01067330 EMBL:CABZ01067331 EMBL:CU634006 IPI:IPI00799808
Ensembl:ENSDART00000084348 Bgee:F1RE04 Uniprot:F1RE04
Length = 760
Score = 337 (123.7 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 111/371 (29%), Positives = 171/371 (46%)
Query: 24 SLNDLVPDLASLQDLATRGSWRTIIDNVSR---ARSQSLLTQPHH--HLT---YLAYNTL 75
S N + + L+ L + +WR +D R A Q H H T L + L
Sbjct: 397 SANSVEQNFLGLKRLISTKNWRAAVDLTGRLLTAHGQGYGKSGQHTTHTTDSLQLWFVRL 456
Query: 76 AL-MKLRRFDEAQQELDSLEDFNSSGYQYETYPHIYPNRTGSMVPFSLRWLYAVLPIKLS 134
+L MKL F A+ EL+ D + YE YP +YP R GSMVPFS+R L+A LP L
Sbjct: 457 SLLMKLSLFQNAELELEPFGDLDHPNLYYEYYPAVYPGRRGSMVPFSMRLLHAELPQYLQ 516
Query: 135 NRQVGLDRFYELLDFVREKLARKLAEKLEE--------------SVKSWKKREIFVLNCL 180
Q LDR + + V +K+ L E L E S++ W+ R ++ +
Sbjct: 517 KPQETLDRLHRIKS-VCQKILSNLQEGLAEDGSMVNLTQENRLASLELWRSRLSRLMYSM 575
Query: 181 IGYHLSSKEYNVCFDLMNESIGRGNGLDPILVSKLGFIQMQVGDLEGAKKSFNRVEEML- 239
L K+Y + + I L+S +G I +Q+GD+ A+K F VE
Sbjct: 576 ANCLLMMKDYVLAVETYRSIIEFEPEQKVQLLSGIGRIFLQIGDIRTAEKYFQDVENACQ 635
Query: 240 NEGKFEDGLLSEVEFRNLVSRNKALIYLVGKDYVSAVREYEECIERDYNDIVAINNKALC 299
++GK + E V N+A +YL +Y A + + D + VA NN A+C
Sbjct: 636 SKGK------TATE-ETSVLMNRAFVYLSQNNYADAHTCFSSVLRLDPKNPVANNNAAVC 688
Query: 300 LMYLRDLSDSIKVLENALERVPTVALNETLVVNLCSMYELAYVNHSDIKRTLSSWIGRVA 359
L+YL L +S+ LE+ + + P + L+E+++ NL +MYEL + K+ L
Sbjct: 689 LLYLGRLKESLGQLESLVHKDPALYLHESVLFNLTTMYELESSRSTQKKQALLEAAACRE 748
Query: 360 PDDFDSSCTRI 370
D F+ C ++
Sbjct: 749 GDSFNIQCLKL 759
>DICTYBASE|DDB_G0281351 [details] [associations]
symbol:DDB_G0281351 species:44689 "Dictyostelium
discoideum" [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
PROSITE:PS50005 PROSITE:PS50293 dictyBase:DDB_G0281351
EMBL:AAFI02000040 Gene3D:1.25.40.10 RefSeq:XP_640741.1
EnsemblProtists:DDB0204152 GeneID:8623017 KEGG:ddi:DDB_G0281351
eggNOG:NOG287370 InParanoid:Q54U24 Uniprot:Q54U24
Length = 602
Score = 173 (66.0 bits), Expect = 6.3e-29, Sum P(3) = 6.3e-29
Identities = 43/165 (26%), Positives = 92/165 (55%)
Query: 160 EKLEESVKSWKKREIFVLNCLIGYHLS-SKEYNVCFDLMNESIGRGNGLDPILVSKLGFI 218
+ L E + W++RE ++ ++ + + ++++ + ++ + I + D ++S LG I
Sbjct: 365 QSLLELLSLWRERERRIIFSIVTFIIQKNRDFLLAIKILEDLIQKFEA-DIYILSALGRI 423
Query: 219 QMQVGDLEGAKKSFNRVE----EMLNEGKFEDGLLSEVEFRNLVSRNKALIYLVGKD-YV 273
+Q+G+L+GA+K F V+ +N+ + L + ++ +L++ Y + D Y
Sbjct: 424 HLQMGNLKGAEKIFKFVDIIIKNTINDNNNNNNLNNSLKILSLMNHG---FYSIASDQYP 480
Query: 274 SAVREYEECIERDYNDIVAINNKALCLMYLRDLSDSIKVLENALE 318
SA++ +E+ I+ + N+I AINNK + ++Y DL +I LE L+
Sbjct: 481 SAIKYFEDVIQIEPNNIAAINNKCISMLYTCDLGGAITELEGVLQ 525
Score = 167 (63.8 bits), Expect = 6.3e-29, Sum P(3) = 6.3e-29
Identities = 44/160 (27%), Positives = 76/160 (47%)
Query: 6 PVCQNPSRFTDPLTNAFGSLNDLVPDLASLQDLATRGSWRTIIDNVSRARSQSLLTQPHH 65
P Q S F +P + + + LV D +L+ L G+W + + + P
Sbjct: 123 PQHQPISYFPNP---QYSNSSSLVGDETTLKRLIKIGNWNNVFKVAELCIANT--NNPQS 177
Query: 66 HLTYLAYNTLALMKLRRFDEAQQELDSLEDFNSSGYQYETYPHIYPNRTGSMVPFSLRWL 125
L Y +A +K+R + A E+ + D YE+YP ++P + GSMVPFS+R +
Sbjct: 178 ILQYKLCRIIAHVKMRSYSAADSEIKGIGDIRDLVNCYESYPQLFPGKKGSMVPFSMRII 237
Query: 126 YAVLPIKLSNRQVGLDRFYELLDFVREKLARKLAEKLEES 165
A L L+ + LD Y LL ++++ + L E + ++
Sbjct: 238 KAELACHLNTEKFQLDSLYALLSICKKEI-QNLNETISKN 276
Score = 96 (38.9 bits), Expect = 6.3e-29, Sum P(3) = 6.3e-29
Identities = 17/47 (36%), Positives = 32/47 (68%)
Query: 324 ALNETLVVNLCSMYELAYVNHSDIKRTLSSWIGRVAPDDFDSSCTRI 370
+++ETL+ N+CS+YELA ++ K+++ + + APD+FD +I
Sbjct: 550 SIDETLIFNICSLYELASDKSNEKKKSIMGDVAKKAPDNFDFKVFKI 596
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.136 0.397 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 370 370 0.00086 117 3 11 22 0.39 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 5
No. of states in DFA: 620 (66 KB)
Total size of DFA: 246 KB (2132 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 32.64u 0.12s 32.76t Elapsed: 00:00:04
Total cpu time: 32.65u 0.12s 32.77t Elapsed: 00:00:04
Start: Mon May 20 15:46:11 2013 End: Mon May 20 15:46:15 2013