STRING 9.05 
  AT4G39820 protein (Arabidopsis thaliana) - STRING network view
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
AT4G39820
binding; binding; FUNCTIONS IN- binding; INVOLVED IN- biological_process unknown; LOCATED IN- cellular_component unknown; EXPRESSED IN- 24 plant structures; EXPRESSED DURING- 15 growth stages; CONTAINS InterPro DOMAIN/s- Tetratricopeptide-like helical (InterPro-IPR011990), Tetratricopeptide region (InterPro-IPR013026); Has 225 Blast hits to 221 proteins in 90 species- Archae - 2; Bacteria - 18; Metazoa - 104; Fungi - 15; Plants - 24; Viruses - 0; Other Eukaryotes - 62 (source- NCBI BLink). (408 aa)
(Arabidopsis thaliana)
Predicted Functional Partners:
AHK2
AHK2 (ARABIDOPSIS HISTIDINE KINASE 2); cytokinin receptor/ osmosensor/ protein histidine kinase [...] (1176 aa)
       0.736
ATNAC3
ATNAC3 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 3); protein heterodimerization/ transcription [...] (318 aa)
       0.479
TRFL5
TRFL5 (TRF-LIKE 5); DNA binding / transcription factor; Arabidopsis thaliana myb family transcr [...] (390 aa)
       0.479
AT5G02150
binding; binding; FUNCTIONS IN- binding; LOCATED IN- cellular_component unknown; EXPRESSED IN- [...] (324 aa)
       0.462
HSP23.6
ATHSP23.6-MITO (MITOCHONDRION-LOCALIZED SMALL HEAT SHOCK PROTEIN 23.6); AtHSP23.6-mito mRNA, nu [...] (210 aa)
       0.462
AT3G54390
transcription factor; transcription factor; FUNCTIONS IN- transcription factor activity; INVOLV [...] (296 aa)
       0.462
LSU1
LSU1 (RESPONSE TO LOW SULFUR 1); RESPONSE TO LOW SULFUR 1 (LSU1); FUNCTIONS IN- molecular_funct [...] (94 aa)
       0.462
HUB1
HUB1 (HISTONE MONO-UBIQUITINATION 1); protein binding / protein homodimerization/ ubiquitin-pro [...] (878 aa)
       0.462
GAMMA_CA2
GAMMA CA2 (GAMMA CARBONIC ANHYDRASE 2); carbonate dehydratase; Encodes mitochondrial gamma carb [...] (278 aa)
       0.462
 
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Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
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