Query 017533
Match_columns 370
No_of_seqs 233 out of 1187
Neff 6.1
Searched_HMMs 29240
Date Mon Mar 25 15:57:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017533.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017533hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2j0a_A Beta-1,3-N-acetylglucos 99.9 6.9E-24 2.4E-28 203.7 14.8 194 130-350 10-215 (280)
2 1xhb_A Polypeptide N-acetylgal 95.5 0.3 1E-05 48.5 15.5 171 172-349 62-257 (472)
3 2d7i_A Polypeptide N-acetylgal 94.4 0.81 2.8E-05 47.0 15.6 170 173-349 146-337 (570)
4 2ffu_A Ppgalnact-2, polypeptid 93.6 1.2 4.2E-05 44.5 14.8 167 172-349 99-289 (501)
5 3bcv_A Putative glycosyltransf 91.8 4.3 0.00015 35.3 14.2 166 171-345 34-220 (240)
6 4fix_A UDP-galactofuranosyl tr 90.9 4.1 0.00014 42.8 15.2 127 221-349 259-416 (657)
7 2z86_A Chondroitin synthase; G 90.1 9.3 0.00032 39.0 16.8 133 220-352 164-332 (625)
8 1qg8_A Protein (spore coat pol 89.9 9.6 0.00033 33.4 16.9 164 171-345 30-209 (255)
9 4hg6_A Cellulose synthase subu 84.6 27 0.00093 37.3 16.9 129 221-352 229-370 (802)
10 2z86_A Chondroitin synthase; G 75.7 33 0.0011 34.8 13.4 157 171-345 404-567 (625)
11 2lnd_A De novo designed protei 53.5 26 0.00088 27.3 5.5 74 139-227 31-104 (112)
12 2bo4_A Mannosylglycerate synth 45.6 80 0.0027 30.9 9.2 168 171-343 28-210 (397)
13 2c0n_A A197; thermophil protei 39.8 1.6E+02 0.0055 26.4 9.3 133 191-335 16-159 (203)
14 1fo8_A Alpha-1,3-mannosyl-glyc 39.2 64 0.0022 31.0 7.2 84 220-315 89-179 (343)
15 3ckj_A Putative uncharacterize 35.0 20 0.00067 33.6 2.7 46 221-266 122-170 (329)
16 1vf5_H Protein PET N; photosyn 21.7 54 0.0019 20.4 2.0 23 11-33 4-26 (29)
17 1omz_A Alpha-1,4-N-acetylhexos 20.7 82 0.0028 29.8 4.1 38 229-266 105-142 (293)
No 1
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A*
Probab=99.91 E-value=6.9e-24 Score=203.66 Aligned_cols=194 Identities=17% Similarity=0.163 Sum_probs=130.8
Q ss_pred CCCeEEEEEEECCCCC-HHHHHHHHHHhccCchhhHhhhccCceEEEEEeecCCCCChhHHHHHHHHHhhCCCEEEeccc
Q 017533 130 RPKVFVVIGINTAFSS-RKRRDSVRDTWMPQGEKLIQLEREKGIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLEHI 208 (370)
Q Consensus 130 ~~~~~llI~V~S~~~~-~~rR~aIR~TW~~~~~~l~~l~~~~~i~v~FVvG~s~~~~~~~~~~I~~E~~~~~DIL~ld~~ 208 (370)
...-.|+|+|+|++++ .+|+.+||+||++.... . .||.+... +.. +... ..++++..++.
T Consensus 10 ~~~~~I~~~V~T~~~~~~~R~~~I~~TW~~~~~~----------~-~fifsd~~--d~~----l~~~--~~~~~~~~~~~ 70 (280)
T 2j0a_A 10 LQLGDIFIAVKTTWAFHRSRLDLLLDTWVSRIRQ----------Q-TFIFTDSP--DER----LQER--LGPHLVVTQCS 70 (280)
T ss_dssp CCGGGEEEEEECCGGGTTTTHHHHHHTGGGGSGG----------G-EEEEESSC--CHH----HHHH--HGGGEEECCC-
T ss_pred CCcccEEEEEECcHHHHHHHHHHHHHHHhccCCC----------c-eEEEcCCC--ccc----cccc--ccccceecccc
Confidence 3445788999999984 57899999999986531 1 24333332 222 2222 24578887764
Q ss_pred --cccccchhHHHHHHHHHHhcCCceEEEEecCceeecHHHHHHHHhhcCCCCceEEEEeecCcccccCCCccccCCccc
Q 017533 209 --EGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGMLATTLSRHRSKPRVYIGCMKSGPVLSQKNVKYHEPEYWK 286 (370)
Q Consensus 209 --Dsy~nLt~Kt~~~~~wa~~~~~a~F~lKvDDDvfVnl~~L~~~L~~~~~~~~lYiG~~~~~pv~rd~~~K~~~pe~w~ 286 (370)
+++.+++.|+...+.+.. ..+++|++|+|||+|||+++|..+|..+++..++|+|+.....+++ .+++.|.+.
T Consensus 71 ~~~~~~~l~~K~~~~~~~~l-~~~~~Wf~~~DDDtyv~~~nL~~~L~~~d~~~~~YiG~~~~~~~~~---~~~~~~~~~- 145 (280)
T 2j0a_A 71 AEHSHPALSCKMAAEFDAFL-VSGLRWFCHVDDDNYVNPKALLQLLKTFPQDRDVYVGKPSLNRPIH---ASELQSKQR- 145 (280)
T ss_dssp ------CCCHHHHHHHHHHH-HHTCSEEEEEETTEEECHHHHHHHHTTSCTTSCCEEECEEC------------------
T ss_pred ccccccchHHHHHHHHHHHh-CCCCcEEEEeCCCcEEcHHHHHHHHHhCCCCCCEEEEEeccCcccc---ccccCcccc-
Confidence 467889999999998754 3699999999999999999999999999999999999864322222 134444320
Q ss_pred cCCCCCccCccc-cCCeeeecHHHHHHHHHhCCCc-------CCCCcchHHHHHHHh-cCCCeEecCCCceeC
Q 017533 287 FGEEGNKYFRHA-TGQIYAISKDLATYISINQPIL-------HKFANEDVSLGSWFI-GLEVEHIDDRNMCCQ 350 (370)
Q Consensus 287 f~y~~~~Yp~Y~-~G~~YvlSrdla~~I~~~~~~l-------~~~~~EDV~lG~~l~-gL~v~~id~~~fc~~ 350 (370)
++...| +|| +|+||+||++++++|+...... .....||+++|.|+. .++|...++..|...
T Consensus 146 --~~~~~~-~y~~GGaG~vlSr~~l~~l~~~~~~~~~~~~~~~~~~~dD~~lG~Cl~~~lGV~~~~~~~Fh~~ 215 (280)
T 2j0a_A 146 --TKLVRF-WFATGGAGFCINRQLALKMVPWASGSHFVDTSALIRLPDDCTVGYIIECKLGGRLQPSPLFHSH 215 (280)
T ss_dssp -------C-CEECGGGCEEEEHHHHHHHHHHHTTCTTSCCTTTTTSCHHHHHHHHHHHTTCCCEEECTTCCCS
T ss_pred --cccccc-CcccCCCEEEECHHHHHHHHHhhcccccccccccCCCCccHHHHHHHHhcCCCCceecccccCC
Confidence 111234 466 5689999999999999743221 233479999999998 999999999999653
No 2
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=95.51 E-value=0.3 Score=48.46 Aligned_cols=171 Identities=13% Similarity=0.103 Sum_probs=92.0
Q ss_pred eEEEEEeecCCCCChhHHHHHHHHHhhCC-CEEEeccccccccchhHHHHHHHHHHhcCCceEEEEecCceeecHHHHHH
Q 017533 172 IIIRFMIGHSATSNSILDKAIDSEDAQHK-DFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGMLAT 250 (370)
Q Consensus 172 i~v~FVvG~s~~~~~~~~~~I~~E~~~~~-DIL~ld~~Dsy~nLt~Kt~~~~~wa~~~~~a~F~lKvDDDvfVnl~~L~~ 250 (370)
..++.|-..|. ++.....+++-.+++. .+..+...++.. .-.+...+.+....+|++..|+|+.+..+.|..
T Consensus 62 ~EIIvVDd~S~--d~~t~~~l~~~~~~~~~~v~vi~~~~n~G-----~~~a~N~g~~~A~gd~i~flD~D~~~~p~~L~~ 134 (472)
T 1xhb_A 62 EEIVLVDDASE--RDFLKRPLESYVKKLKVPVHVIRMEQRSG-----LIRARLKGAAVSRGQVITFLDAHCECTAGWLEP 134 (472)
T ss_dssp EEEEEEECSCC--CGGGTHHHHHHHHSSSSCEEEEECSSCCC-----HHHHHHHHHHHCCSSEEEEEESSEEECTTCHHH
T ss_pred eEEEEEECCCC--cHHHHHHHHHHHHHCCCcEEEEECCCCCC-----hHHHHHHHHHhccCCeEEEECCCeEeCccHHHH
Confidence 35555554443 2233444555455666 455555433321 223444555566799999999999999988888
Q ss_pred HHhhcCCCCce-EEEEee--c-CcccccCCC-------ccccCCcccc--------C--C-CCCccCccccCCeeeecHH
Q 017533 251 TLSRHRSKPRV-YIGCMK--S-GPVLSQKNV-------KYHEPEYWKF--------G--E-EGNKYFRHATGQIYAISKD 308 (370)
Q Consensus 251 ~L~~~~~~~~l-YiG~~~--~-~pv~rd~~~-------K~~~pe~w~f--------~--y-~~~~Yp~Y~~G~~YvlSrd 308 (370)
++......+.+ ..|.+. . ......... .|.....|.. . . ......+++.|++++++++
T Consensus 135 ll~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~ 214 (472)
T 1xhb_A 135 LLARIKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRD 214 (472)
T ss_dssp HHHHHHHCTTEEEEEEEEEECSSSCCEECCCTTEEEEECTTCCEEEEECCHHHHHHTTTCTTSCEECSBCCSSSEEEEHH
T ss_pred HHHHHHhCCCEEEEeeeeeEcCCCceeccCCCcccceeeccceeecccCCHHHHhcccCCCCCcccCccccceeEEEEHH
Confidence 87766443433 333321 1 111000000 0111100100 0 0 0123345688999999999
Q ss_pred HHHHHHHhCCCcCCCCcchHHHHH--HHhcCCCeEecCCCcee
Q 017533 309 LATYISINQPILHKFANEDVSLGS--WFIGLEVEHIDDRNMCC 349 (370)
Q Consensus 309 la~~I~~~~~~l~~~~~EDV~lG~--~l~gL~v~~id~~~fc~ 349 (370)
+...+---.+.+..+..||+-++. |..|..+..++.....|
T Consensus 215 ~~~~iGgfde~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v~H 257 (472)
T 1xhb_A 215 YFQEIGTYDAGMDIWGGENLEISFRIWQCGGTLEIVTCSHVGH 257 (472)
T ss_dssp HHHHTTSCCTTSCTTCCCCSHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred HHHHcCCCCCcccccCchhHHHHHHHHhcCCeEEEccCcEEEE
Confidence 998876433444444578888775 44677666665544443
No 3
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=94.42 E-value=0.81 Score=47.02 Aligned_cols=170 Identities=12% Similarity=0.056 Sum_probs=91.1
Q ss_pred EEEEEeecCCCCChhHHHHHHHHHhhCCCEEEeccccccccchhHHHHHHHHHHhcCCceEEEEecCceeecHHHHHHHH
Q 017533 173 IIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGMLATTL 252 (370)
Q Consensus 173 ~v~FVvG~s~~~~~~~~~~I~~E~~~~~DIL~ld~~Dsy~nLt~Kt~~~~~wa~~~~~a~F~lKvDDDvfVnl~~L~~~L 252 (370)
.++.|-..|. ++++...+++-.+++..|..+...++. . .-.+...+.+....+|++..|+|+.++.+.|..++
T Consensus 146 EIIVVDDgS~--D~tl~~~l~~~~~~~~~v~vi~~~~n~-G----~~~A~N~G~~~A~gd~i~fLD~D~~~~p~~L~~ll 218 (570)
T 2d7i_A 146 EIVLVDDFSD--REHLKKPLEDYMALFPSVRILRTKKRE-G----LIRTRMLGASVATGDVITFLDSHCEANVNWLPPLL 218 (570)
T ss_dssp EEEEEECSCC--CGGGTHHHHHHHTTSTTEEEEECSSCC-C----HHHHHHHHHHHCCSSEEEECCSSEEECTTCSHHHH
T ss_pred EEEEEECCCC--cHHHHHHHHHHHHhCCeEEEEECCCCC-C----HHHHHHHHHHhcCCCEEEEEcCCccccccHHHHHH
Confidence 5555554443 334344555555666666555443321 2 22334445555678999999999999988777777
Q ss_pred hhcCCCCceEEEE-ee--cCc-c-cccC-CCccccCCccccCC--------------CCCccCccccCCeeeecHHHHHH
Q 017533 253 SRHRSKPRVYIGC-MK--SGP-V-LSQK-NVKYHEPEYWKFGE--------------EGNKYFRHATGQIYAISKDLATY 312 (370)
Q Consensus 253 ~~~~~~~~lYiG~-~~--~~p-v-~rd~-~~K~~~pe~w~f~y--------------~~~~Yp~Y~~G~~YvlSrdla~~ 312 (370)
......+.+.+|. +. .+. . .+.. .......-.|.+.+ ......+++.|+++++++++...
T Consensus 219 ~~l~~~~~~vv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~ 298 (570)
T 2d7i_A 219 DRIARNRKTIVCPMIDVIDHDDFRYETQAGDAMRGAFDWEMYYKRIPIPPELQKADPSDPFESPVMAGGLFAVDRKWFWE 298 (570)
T ss_dssp HHHHHCTTEEEEEEEEEECTTTCCEECCTTSSCEEEECTTCCEEEECCCTTTCCSSTTSCEECSSCCSSSEEEEHHHHHH
T ss_pred HHHHhCCCEEEeeeeeccCCCchhhccccCCcccccccccccccccccchhhhccCCCcceecccccceEEEEEHHHHHh
Confidence 6654444444443 21 111 0 0000 00000000111100 01122345789999999999988
Q ss_pred HHHhCCCcCCCCcchHHHHHHH--hcCCCeEecCCCcee
Q 017533 313 ISINQPILHKFANEDVSLGSWF--IGLEVEHIDDRNMCC 349 (370)
Q Consensus 313 I~~~~~~l~~~~~EDV~lG~~l--~gL~v~~id~~~fc~ 349 (370)
+---...+..+..||+-+..-+ .|..+..++.....+
T Consensus 299 iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~~~v~H 337 (570)
T 2d7i_A 299 LGGYDPGLEIWGGEQYEISFKVWMCGGRMEDIPCSRVGH 337 (570)
T ss_dssp TTSSCTTCCSSSSHHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred cCCCCCcccccCcchHHHHHHHHhCCCeEEEccCeEEEE
Confidence 8543344444447998887544 566666555544443
No 4
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=93.64 E-value=1.2 Score=44.51 Aligned_cols=167 Identities=10% Similarity=0.021 Sum_probs=89.4
Q ss_pred eEEEEEeecCCCCChhHHHHHHHHHhhCCCEEEeccccccccchhHHHHHHHHHHhcCCceEEEEecCceeecHHHHHHH
Q 017533 172 IIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGMLATT 251 (370)
Q Consensus 172 i~v~FVvG~s~~~~~~~~~~I~~E~~~~~DIL~ld~~Dsy~nLt~Kt~~~~~wa~~~~~a~F~lKvDDDvfVnl~~L~~~ 251 (370)
+.+++|-..|. ++++. ...+++..+-.+...++. - .-.+...+.+....+|++..|+|..+.++.|..+
T Consensus 99 ~EIIvVDDgS~--D~t~~----~~~~~~~~v~vi~~~~n~---G--~~~A~N~G~~~A~gd~i~flD~D~~~~p~~L~~l 167 (501)
T 2ffu_A 99 KEIILVDDYSN--DPEDG----ALLGKIEKVRVLRNDRRE---G--LMRSRVRGADAAQAKVLTFLDSHCECNEHWLEPL 167 (501)
T ss_dssp EEEEEEECSCS--CTHHH----HGGGGBTTEEEEECSSCC---H--HHHHHHHHHHHCCSSEEEECCSSEEECTTCHHHH
T ss_pred eeEEEEECCCC--chHHH----HHHhcCCCEEEEECCCCc---C--HHHHHHHHHHhcCCCEEEEECCCcccCccHHHHH
Confidence 35666655443 23322 223445556555443322 1 2344555566668999999999999998888888
Q ss_pred HhhcCCCCceEEE-Eee--c-Cccc-cc--C---C-CccccCCcccc-----------CCCCCccCccccCCeeeecHHH
Q 017533 252 LSRHRSKPRVYIG-CMK--S-GPVL-SQ--K---N-VKYHEPEYWKF-----------GEEGNKYFRHATGQIYAISKDL 309 (370)
Q Consensus 252 L~~~~~~~~lYiG-~~~--~-~pv~-rd--~---~-~K~~~pe~w~f-----------~y~~~~Yp~Y~~G~~YvlSrdl 309 (370)
+......+...++ .+. . .... .. . + -.|.....|.. ........+++.|++.++++++
T Consensus 168 l~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~ 247 (501)
T 2ffu_A 168 LERVAEDRTRVVSPIIDVINMDNFQYVGASADLKGGFDWNLVFKWDYMTPEQRRSRQGNPVAPIKTPMIAGGLFVMDKFY 247 (501)
T ss_dssp HHHHHHCTTEEEEEEEEEECTTTCCEECBCSSEEEEECTTCCEEEEECCHHHHHHTSSCTTSCEECSSCCSSSEEEEHHH
T ss_pred HHHHHhCCCeEEEeeeccCcCCCceeecCCcccceEeeecCCCccccCCHHHHhhccCCCCCcccCccccceEEEEEHHH
Confidence 7765443333333 221 1 1000 00 0 0 00110000100 0001223456789999999999
Q ss_pred HHHHHHhCCCcCCCCcchHHHHHH--HhcCCCeEecCCCcee
Q 017533 310 ATYISINQPILHKFANEDVSLGSW--FIGLEVEHIDDRNMCC 349 (370)
Q Consensus 310 a~~I~~~~~~l~~~~~EDV~lG~~--l~gL~v~~id~~~fc~ 349 (370)
...+---...+..+..||+-+..- ..|..+..++...+.|
T Consensus 248 ~~~iGgfde~~~~~g~ED~dl~~Rl~~~G~~i~~~p~~~v~H 289 (501)
T 2ffu_A 248 FEELGKYDMMMDVWGGENLEISFRVWQCGGSLEIIPCSRVGH 289 (501)
T ss_dssp HHHTTCCCTTCCSSSSHHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred HHHhCCCCccccccCcchHHHHHHHHhcCCeEEEccCcEEEE
Confidence 988864334444445899988754 4676666665544444
No 5
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=91.83 E-value=4.3 Score=35.33 Aligned_cols=166 Identities=13% Similarity=0.056 Sum_probs=83.4
Q ss_pred ceEEEEEeecCCCCChhHHHHHHHHHhhCCCEEEeccccccccchhHHHHHHHHHHhcCCceEEEEecCceeecHHHHHH
Q 017533 171 GIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGMLAT 250 (370)
Q Consensus 171 ~i~v~FVvG~s~~~~~~~~~~I~~E~~~~~DIL~ld~~Dsy~nLt~Kt~~~~~wa~~~~~a~F~lKvDDDvfVnl~~L~~ 250 (370)
.+.++.|-..|. ++ ....+++-.+++..+..+. .+ |.- .-.....+.+....+|++.+|+|.++..+.|..
T Consensus 34 ~~eiIvvDd~S~--d~-t~~~~~~~~~~~~~i~~i~-~~---n~G--~~~a~N~g~~~a~g~~i~~lD~Dd~~~~~~l~~ 104 (240)
T 3bcv_A 34 DIEIILIDDESP--DN-CPKICDDYAAQYPNIKVIH-KK---NAG--LGMACNSGLDVATGEYVAFCDSDDYVDSDMYMT 104 (240)
T ss_dssp SEEEEEEECCCS--SS-HHHHHHHHHHHCSSEEEEE-CC---CCC--HHHHHHHHHHHCCSSEEEECCTTCCCCTTHHHH
T ss_pred CeEEEEEECCCC--cC-HHHHHHHHHhhCCCEEEEE-CC---CCC--hHHHHHHHHHHcCCCEEEEECCCCcCCHHHHHH
Confidence 456666654443 22 2334444445566666554 22 222 234455666667889999999999999888877
Q ss_pred HHhhcCC-CCceEEEEee----cCc----cccc-CCCccccCCcc-----ccCCCCCcc---C-ccccCCeeeecHHHHH
Q 017533 251 TLSRHRS-KPRVYIGCMK----SGP----VLSQ-KNVKYHEPEYW-----KFGEEGNKY---F-RHATGQIYAISKDLAT 311 (370)
Q Consensus 251 ~L~~~~~-~~~lYiG~~~----~~p----v~rd-~~~K~~~pe~w-----~f~y~~~~Y---p-~Y~~G~~YvlSrdla~ 311 (370)
.+..... ...+.+|... .+. +... ....++....+ .+......+ + ...+|++.++.++++.
T Consensus 105 l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~ 184 (240)
T 3bcv_A 105 MYNVAQKYTCDAVFTGLKRITMAGIPTGTVTHQKEFKLYKNKNEIHTLLKDLIASDPYAREERAIQVSAKVVLYRRNLIE 184 (240)
T ss_dssp HHHHHHHHTCSEEEC--------------------CEEECSHHHHHHHHGGGTSSCHHHHHHHHHHHTCSCEEEEHHHHH
T ss_pred HHHHHHhcCCCEEEEeeEEEccCCccccccccccccccccCHHHHHHHHHHHhhcchhhccccccccchhheeeeHHHHH
Confidence 7766533 3445444321 111 1000 00011111000 000000000 0 0145788999999998
Q ss_pred HHHHhCCCcCCCCcchHHHHHHH--hcCCCeEecCC
Q 017533 312 YISINQPILHKFANEDVSLGSWF--IGLEVEHIDDR 345 (370)
Q Consensus 312 ~I~~~~~~l~~~~~EDV~lG~~l--~gL~v~~id~~ 345 (370)
.+-.....-..+..||..+..-+ .|..+..+++.
T Consensus 185 ~~g~~f~~~~~~~~eD~~~~~r~~~~g~~i~~~~~~ 220 (240)
T 3bcv_A 185 KKHLRFVSERILPSEDLIFNVDVLANSNIVCVLPQT 220 (240)
T ss_dssp HTTCCCCCTTTCTTHHHHHHHHHHTTCSCEEECC--
T ss_pred HcCCccCCCCCccCCCHHHHHHHHHhCCEEEEECCC
Confidence 86422222112346999998755 45667777664
No 6
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=90.95 E-value=4.1 Score=42.81 Aligned_cols=127 Identities=16% Similarity=0.146 Sum_probs=72.9
Q ss_pred HHHHHHhcCCceEEEEecCceeecHHHHHHHHhhcCC--CCceEEEEee--cCcccccCCCcccc---------CCc-c-
Q 017533 221 FFSTAVAKWDADFYVKVDDDVHVNLGMLATTLSRHRS--KPRVYIGCMK--SGPVLSQKNVKYHE---------PEY-W- 285 (370)
Q Consensus 221 ~~~wa~~~~~a~F~lKvDDDvfVnl~~L~~~L~~~~~--~~~lYiG~~~--~~pv~rd~~~K~~~---------pe~-w- 285 (370)
+++.|....+++|++..|||+.+..+.|..++..... ...+..|.+. ..+..-...+.+.. +.. +
T Consensus 259 Gl~~A~g~~~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~~~vg~~il~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 338 (657)
T 4fix_A 259 VMYEALKNTDCQQILFMDDDIRLEPDSILRVLAMHRFAKAPMLVGGQMLNLQEPSHLHIMGEVVDRSIFMWTAAPHAEYD 338 (657)
T ss_dssp HHHHHHHHCCCSEEEEECSSEEECTHHHHHHHHHHHHBSSCCEEEEEEEETTSTTEECCSCEEEETTTTEEEECTTCCSC
T ss_pred HHHHHHhcCCCCEEEEECCCCccChhHHHHHHHHHHhCCCcEEEEeEEecCCCCceeeecccEecccccccccccccccc
Confidence 5566655457899999999999999888887765532 2334434443 11100000001110 000 0
Q ss_pred -ccC-------------CCCCccCccccCCeeeecHHHHHHHHHhCCCcCCCCcchHHHHHHH--hcCCCeEecCCCcee
Q 017533 286 -KFG-------------EEGNKYFRHATGQIYAISKDLATYISINQPILHKFANEDVSLGSWF--IGLEVEHIDDRNMCC 349 (370)
Q Consensus 286 -~f~-------------y~~~~Yp~Y~~G~~YvlSrdla~~I~~~~~~l~~~~~EDV~lG~~l--~gL~v~~id~~~fc~ 349 (370)
.|. +.......|++|.+.++.+++++.+---.+ -.+..||+-++.=+ .|..+..+++..+.|
T Consensus 339 ~~f~~~~l~~~~~~~~~~~~~~~v~~~~g~~~lirr~v~~~vGgfd~--~F~~~ED~Dl~lR~~~~G~ki~~~p~a~V~H 416 (657)
T 4fix_A 339 HDFAEYPLNDNNSRSKLLHRRIDVDYNGWWTCMIPRQVAEELGQPLP--LFIKWDDADYGLRAAEHGYPTVTLPGAAIWH 416 (657)
T ss_dssp EETTTSCSSCSSHHHHGGGBCCCCSBCCTTEEEEEHHHHHHHCSCCS--CSSSSHHHHHHHHHHHTTCCEEEEEEEEEEE
T ss_pred ccccccccccccccccccccceeccccchhHhHhhHHHHHHhCCChh--HhccCcHHHHHHHHHHcCCeEEEECCEEEEE
Confidence 000 011223457899999999999998743221 12347999999766 466666666655555
No 7
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=90.11 E-value=9.3 Score=38.95 Aligned_cols=133 Identities=17% Similarity=0.143 Sum_probs=73.7
Q ss_pred HHHHHHHhcCCceEEEEecCceeecHHHHHHHHhhcCCCCc-eEEEEee---cCc--cc---ccC---------------
Q 017533 220 IFFSTAVAKWDADFYVKVDDDVHVNLGMLATTLSRHRSKPR-VYIGCMK---SGP--VL---SQK--------------- 275 (370)
Q Consensus 220 ~~~~wa~~~~~a~F~lKvDDDvfVnl~~L~~~L~~~~~~~~-lYiG~~~---~~p--v~---rd~--------------- 275 (370)
..+..+.+....+|++..|+|..+..+.|...+......+. ..+|... ... .. ...
T Consensus 164 ~a~N~g~~~a~g~~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (625)
T 2z86_A 164 AVRNLGLRAAKYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLINEIPEIITNNQV 243 (625)
T ss_dssp HHHHHHHHHCCSSEEEEECTTEEECTTHHHHHHHHHHHCTTEEEECCEEEECCTTCCHHHHHHSTTGGGTSCC-------
T ss_pred HHHHHHHHhCCcCEEEEECCCCCCCHHHHHHHHHHHhcCCceEEEEeeeeccCcccchhhcccchHHhhhcchhccCCch
Confidence 34555666668999999999999998888887776543332 3333221 111 00 000
Q ss_pred --------CCccccCCcccc--CCCCCccCccccCCeeeecHHHHHHHHHhCCCcCCCCcchHHHHHHH--hcCCCeEec
Q 017533 276 --------NVKYHEPEYWKF--GEEGNKYFRHATGQIYAISKDLATYISINQPILHKFANEDVSLGSWF--IGLEVEHID 343 (370)
Q Consensus 276 --------~~K~~~pe~w~f--~y~~~~Yp~Y~~G~~YvlSrdla~~I~~~~~~l~~~~~EDV~lG~~l--~gL~v~~id 343 (370)
...|........ .........++.|++.+++++++..+---...+..+..||.-++.-+ .|..+.+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~l~~iGgfde~~~~~g~ED~dl~~Rl~~~G~~i~~~p 323 (625)
T 2z86_A 244 AGKVEQNKSVDWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLFRAGWFDEEFTHWGGEDNEFGYRLYREGCYFRSVE 323 (625)
T ss_dssp --------CCCTHHHHHHHTTTTTTCSCGGGGCCTTEEEEETHHHHHHCCCCTTCSSCCCHHHHHHHHHHHTTCEEEECG
T ss_pred hhhhccCCccccchhhhcccccccccCCceeEEeeceeeeEHHHHHHhCCCccccccCCcchhhhhhhHHhCCceEEEcc
Confidence 000100000000 00001112357899999999999988432333334447999998655 566666666
Q ss_pred CCCceeCCC
Q 017533 344 DRNMCCQTP 352 (370)
Q Consensus 344 ~~~fc~~~~ 352 (370)
+...++..+
T Consensus 324 ~~~v~H~~~ 332 (625)
T 2z86_A 324 GAMAYHQEP 332 (625)
T ss_dssp GGCEEEECC
T ss_pred cchhhccCC
Confidence 656655443
No 8
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=89.89 E-value=9.6 Score=33.42 Aligned_cols=164 Identities=7% Similarity=-0.077 Sum_probs=88.2
Q ss_pred ceEEEEEeecCCCCChhHHHHHHHHHhhCCCEEEecccccc-----ccchhHHHHHHHHHHhcCCceEEEEecCceeecH
Q 017533 171 GIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGY-----HELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNL 245 (370)
Q Consensus 171 ~i~v~FVvG~s~~~~~~~~~~I~~E~~~~~DIL~ld~~Dsy-----~nLt~Kt~~~~~wa~~~~~a~F~lKvDDDvfVnl 245 (370)
.+.++.|-..|. +. ..++-++...+..+..+.....- .|. -.-..+..+.+....+|++..|+|.++..
T Consensus 30 ~~eiivvDd~S~---d~-t~~~~~~~~~~~~i~~i~~~~~~~~~~~~n~--G~~~a~N~gi~~a~g~~i~~lD~Dd~~~~ 103 (255)
T 1qg8_A 30 DFELFIMDDNSN---EE-TLNVIRPFLNDNRVRFYQSDISGVKERTEKT--RYAALINQAIEMAEGEYITYATDDNIYMP 103 (255)
T ss_dssp CEEEEEEECSCC---HH-HHHHHGGGGGSTTEEEEECCCCSHHHHHSSC--HHHHHHHHHHHHCCCSEEEEEETTEEECT
T ss_pred ceEEEEEECCCC---ch-HHHHHHHHhhcCCEEEEeccccccccccccc--CHHHHHHHHHHHcCCCEEEEeCCCCccCh
Confidence 456666655443 22 23344454445555554432110 232 23445666777778999999999999998
Q ss_pred HHHHHHHhhcCC--CCceEEEEeec---CcccccCCCccccCCccccCCCCCccCccccCCeeeecHHHHHHHHHhC---
Q 017533 246 GMLATTLSRHRS--KPRVYIGCMKS---GPVLSQKNVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISINQ--- 317 (370)
Q Consensus 246 ~~L~~~L~~~~~--~~~lYiG~~~~---~pv~rd~~~K~~~pe~w~f~y~~~~Yp~Y~~G~~YvlSrdla~~I~~~~--- 317 (370)
+.|...+..... .-.+..|.+.. ... ...-..+..|.. .+. .....+..|++.++.++++..+-...
T Consensus 104 ~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~rr~~~~~~g~~f~~~ 178 (255)
T 1qg8_A 104 DRLLKMVRELDTHPEKAVIYSASKTYHLNEN-RDIVKETVRPAA-QVT---WNAPCAIDHCSVMHRYSVLEKVKEKFGSY 178 (255)
T ss_dssp THHHHHHHHHHHCTTCCEEEEEEEEEEEC----CEEEEEEECCC-SCB---SCCTTTSCGGGEEEETHHHHHHHHHHSSS
T ss_pred HHHHHHHHHHHhCCCceEEEeceEEEEeCCC-CcchhhccCchH-HHH---HhhcCCCccceEEEEHHHHHhhccccccc
Confidence 888877766542 33444444321 100 000011112211 111 12334578999999999999986211
Q ss_pred --CCcCCCCcchHHHHHHHhcC-CCeEecCC
Q 017533 318 --PILHKFANEDVSLGSWFIGL-EVEHIDDR 345 (370)
Q Consensus 318 --~~l~~~~~EDV~lG~~l~gL-~v~~id~~ 345 (370)
........||..+..-+... .+.++++.
T Consensus 179 ~~~~~~~~~~eD~~~~~r~~~~g~~~~~~~~ 209 (255)
T 1qg8_A 179 WDESPAFYRIGDARFFWRVNHFYPFYPLDEE 209 (255)
T ss_dssp SCCCGGGSTTHHHHHHHHHTTTCCBEEEEEE
T ss_pred ccCCcccchHHHHHHHHHHHHhCCEEEecCc
Confidence 01123468999887766322 45555543
No 9
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=84.61 E-value=27 Score=37.28 Aligned_cols=129 Identities=16% Similarity=0.097 Sum_probs=72.4
Q ss_pred HHHHHHhcCCceEEEEecCceeecHHHHHHHHhhcCCCCc--eEEEEee--c-CcccccCCCccccC-Ccccc-CC--C-
Q 017533 221 FFSTAVAKWDADFYVKVDDDVHVNLGMLATTLSRHRSKPR--VYIGCMK--S-GPVLSQKNVKYHEP-EYWKF-GE--E- 290 (370)
Q Consensus 221 ~~~wa~~~~~a~F~lKvDDDvfVnl~~L~~~L~~~~~~~~--lYiG~~~--~-~pv~rd~~~K~~~p-e~w~f-~y--~- 290 (370)
.++.+.+..+.+|++.+|+|+.+..+.|...+......++ +..|... . .+..+........+ +...| .. .
T Consensus 229 alN~gl~~a~gd~Il~lDaD~~~~pd~L~~lv~~~~~dp~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (802)
T 4hg6_A 229 NMSAALERLKGELVVVFDADHVPSRDFLARTVGYFVEDPDLFLVQTPHFFINPDPIQRNLALGDRCPPENEMFYGKIHRG 308 (802)
T ss_dssp HHHHHHHHCCCSEEEECCTTEEECTTHHHHHHHHHHHSSSCCEEECCCCBSSCCHHHHHHTCCTTSCCTTHHHHHTHHHH
T ss_pred HHHHHHHhcCCCEEEEECCCCCcChHHHHHHHHHHhcCCCeEEEeccEEEeCCchHhhhhhHHhhhhHHHHHHHHHHHhh
Confidence 4666777778999999999999999988888876632333 2222211 1 11100000000000 00000 00 0
Q ss_pred -CCccCccccCCeeeecHHHHHHHHHhCCCcCCCCcchHHHHHHHh--cCCCeEecCCCceeCCC
Q 017533 291 -GNKYFRHATGQIYAISKDLATYISINQPILHKFANEDVSLGSWFI--GLEVEHIDDRNMCCQTP 352 (370)
Q Consensus 291 -~~~Yp~Y~~G~~YvlSrdla~~I~~~~~~l~~~~~EDV~lG~~l~--gL~v~~id~~~fc~~~~ 352 (370)
...-.+++.|++.++.+++++.+---. .....||..++.-+. |..+..+++.......|
T Consensus 309 ~~~~~~~~~~G~~~~~Rr~al~~vGgf~---~~~~~ED~~l~~rl~~~G~ri~~~~~~~~~~~~p 370 (802)
T 4hg6_A 309 LDRWGGAFFCGSAAVLRRRALDEAGGFA---GETITEDAETALEIHSRGWKSLYIDRAMIAGLQP 370 (802)
T ss_dssp HHHTTCCCCCSSSEEEEHHHHHHHTTCC---CSSSSHHHHHHHHHHTTTCCEEECCCCCEEECCC
T ss_pred HhhcCCceecccchhhhHHHHHHcCCcC---CCCcchHHHHHHHHHHcCCeEEEecCCEEEecCC
Confidence 000113467999999999999874211 122359999998774 56677777766655444
No 10
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=75.72 E-value=33 Score=34.78 Aligned_cols=157 Identities=11% Similarity=0.057 Sum_probs=80.8
Q ss_pred ceEEEEEeecCCCCChhHHHHHHHHHhhCCCEEEeccccccccchhHHHHHHHHHHhcCCceEEEEecCceeecHHHHHH
Q 017533 171 GIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGMLAT 250 (370)
Q Consensus 171 ~i~v~FVvG~s~~~~~~~~~~I~~E~~~~~DIL~ld~~Dsy~nLt~Kt~~~~~wa~~~~~a~F~lKvDDDvfVnl~~L~~ 250 (370)
.+.++.|-..|. +++ ...+.+-.+.+..+..+. . .|.- .-..+..+.+....+|++..|+|.++..+.|..
T Consensus 404 ~~eiivvdd~S~--d~t-~~~~~~~~~~~~~i~~~~-~---~n~G--~~~a~n~g~~~a~g~~i~~ld~D~~~~~~~l~~ 474 (625)
T 2z86_A 404 DLEVCICDDGST--DDT-LRILQEHYANHPRVRFIS-Q---KNKG--IGSASNTAVRLCRGFYIGQLDSDDFLEPDAVEL 474 (625)
T ss_dssp SEEEEEEEESCS--SSH-HHHHHHHHTTCTTEEEEE-E---CCCC--HHHHHHHHHHHCCSSEEEECCTTCEECTTHHHH
T ss_pred CeEEEEEECcCC--hhH-HHHHHHHHhhCCcEEEEe-C---CCCC--HHHHHHHHHHhcCCCEEEEECCCcccChhHHHH
Confidence 456666665553 222 233433344555565553 2 2221 233455666667889999999999999988888
Q ss_pred HHhhcCCCC--ceEEEEee----cCcccccCCCccccCCccccCCCCCccCccccCCeeeecHHHHHHHHHhCCCcCCCC
Q 017533 251 TLSRHRSKP--RVYIGCMK----SGPVLSQKNVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISINQPILHKFA 324 (370)
Q Consensus 251 ~L~~~~~~~--~lYiG~~~----~~pv~rd~~~K~~~pe~w~f~y~~~~Yp~Y~~G~~YvlSrdla~~I~~~~~~l~~~~ 324 (370)
.+......+ .+..|... .+..+.. .+..+.. . .......++.|.+.++.+++...+.--...+ ..
T Consensus 475 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~---~~~~~~~-~---~~~~~~~~~~~~~~~~~r~~~~~~ggfd~~~--~~ 545 (625)
T 2z86_A 475 CLDEFRKDLSLACVYTTNRNIDREGNLISN---GYNWPIY-S---REKLTSAMICHHFRMFTARAWNLTEGFNESI--SN 545 (625)
T ss_dssp HHHHHHHCTTCSEEEEEEEEECTTSCEEEE---CCCCSSC-C---HHHHTTSCCCCSCEEEEHHHHTTTTCCCSSC--SS
T ss_pred HHHHHHhCCCeeEEEeeeEEECCCCCEecc---CcccccC-C---HHHHhhcccCCceEEEEHHHHHHhCCCCCcc--CC
Confidence 776553222 23223211 1111110 0111110 0 0011223456788899998765543211222 24
Q ss_pred cchHHHHHHHhcC-CCeEecCC
Q 017533 325 NEDVSLGSWFIGL-EVEHIDDR 345 (370)
Q Consensus 325 ~EDV~lG~~l~gL-~v~~id~~ 345 (370)
.||.-+..-+... .+.++++.
T Consensus 546 ~eD~dl~~r~~~~g~~~~~~~~ 567 (625)
T 2z86_A 546 AVDYDMYLKLSEVGPFKHINKI 567 (625)
T ss_dssp CHHHHHHHHHTTTSCEEEEEEE
T ss_pred hHHHHHHHHHHHhCCEEEeCCc
Confidence 6999887666433 55555543
No 11
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=53.53 E-value=26 Score=27.28 Aligned_cols=74 Identities=23% Similarity=0.236 Sum_probs=45.6
Q ss_pred EECCCCCHHHHHHHHHHhccCchhhHhhhccCceEEEEEeecCCCCChhHHHHHHHHHhhCCCEEEeccccccccchhHH
Q 017533 139 INTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKT 218 (370)
Q Consensus 139 V~S~~~~~~rR~aIR~TW~~~~~~l~~l~~~~~i~v~FVvG~s~~~~~~~~~~I~~E~~~~~DIL~ld~~Dsy~nLt~Kt 218 (370)
|.|+.++..-|+.|...=-+ ++ -.++||-|.+.+ + -.+.+.|+++.|=-.-+=-.-..++|++.+
T Consensus 31 irtatssqdirdiiksmkdn----------gk-plvvfvngasqn--d--vnefqneakkegvsydvlkstdpeeltqrv 95 (112)
T 2lnd_A 31 IRTATSSQDIRDIIKSMKDN----------GK-PLVVFVNGASQN--D--VNEFQNEAKKEGVSYDVLKSTDPEELTQRV 95 (112)
T ss_dssp EEEECSHHHHHHHHHHHTTC----------CS-CEEEEECSCCHH--H--HHHHHHHHHHHTCEEEEEECCCHHHHHHHH
T ss_pred eeeccchhhHHHHHHHHHhc----------CC-eEEEEecCcccc--c--HHHHHHHHHhcCcchhhhccCCHHHHHHHH
Confidence 56677778888888753221 22 367799998753 2 235667776665322211122345789999
Q ss_pred HHHHHHHHh
Q 017533 219 KIFFSTAVA 227 (370)
Q Consensus 219 ~~~~~wa~~ 227 (370)
..+++.|-.
T Consensus 96 reflktags 104 (112)
T 2lnd_A 96 REFLKTAGS 104 (112)
T ss_dssp HHHHHHTTS
T ss_pred HHHHHhccc
Confidence 999998753
No 12
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=45.60 E-value=80 Score=30.89 Aligned_cols=168 Identities=7% Similarity=-0.015 Sum_probs=86.3
Q ss_pred ceEEEEEeecCCCCChhH--HHHHHHHHh-hCCC-EEEecccc-c--cccchhHHHHHHHHHHhcCCceEEEEecCcee-
Q 017533 171 GIIIRFMIGHSATSNSIL--DKAIDSEDA-QHKD-FLRLEHIE-G--YHELSAKTKIFFSTAVAKWDADFYVKVDDDVH- 242 (370)
Q Consensus 171 ~i~v~FVvG~s~~~~~~~--~~~I~~E~~-~~~D-IL~ld~~D-s--y~nLt~Kt~~~~~wa~~~~~a~F~lKvDDDvf- 242 (370)
.+.+++|-+-|. |.+. -+++..+.. .++. ++...... + -.....=...+++||......++++.+|-|.-
T Consensus 28 ~~EIIVVDDGSt--D~T~eia~~la~~~~~~~g~~vi~~~~~r~~~~n~GkG~Al~~G~~~Al~~a~gd~vv~mDADlq~ 105 (397)
T 2bo4_A 28 RVHEVLCIGYER--DQTYEAVERAAPEISRATGTPVSVRLQERLGTLRPGKGDGMNTALRYFLEETQWERIHFYDADITS 105 (397)
T ss_dssp TCCEEEEEESSC--CHHHHHHHHHHHHHHHHHSCCEEEEECCCCSSSSSSHHHHHHHHHHHHHHHCCCSEEEECCTTCSS
T ss_pred CeEEEEEECcCC--ccHHHHHHHhhhhcccccCCeEEEEecccCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEcCCCCC
Confidence 356788888775 3332 222222433 3443 33332220 1 12334446678888874568899999999994
Q ss_pred ecHHHHHHHHhhcCCCCceEEEEeec---CcccccCCCccccCCccccCCCCCccCccccCCeeeecHHHHHHHHHhC--
Q 017533 243 VNLGMLATTLSRHRSKPRVYIGCMKS---GPVLSQKNVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISINQ-- 317 (370)
Q Consensus 243 Vnl~~L~~~L~~~~~~~~lYiG~~~~---~pv~rd~~~K~~~pe~w~f~y~~~~Yp~Y~~G~~YvlSrdla~~I~~~~-- 317 (370)
.++..+..++......-++.+|.... +........+......+++. .....+...++.+++++++++.+....
T Consensus 106 ~~P~~i~~Ll~~l~~g~D~V~g~~~r~~~~~~~~~~~~~~ll~~~~~~~--~~~~i~dp~sG~~a~~R~vl~~l~~~~~~ 183 (397)
T 2bo4_A 106 FGPDWITKAEEAADFGYGLVRHYFPRASTDAMITWMITRTGFALLWPHT--ELSWIEQPLGGELLMRREVAAMLYEDERV 183 (397)
T ss_dssp CCHHHHHHHHHHHHTTCSEEEEECCCCTTSCHHHHHTHHHHHHHHCTTS--SGGGCSCTTCCCEEEEHHHHHHHHHCHHH
T ss_pred CCHHHHHHHHHHHHcCCCEEEEEeccccCCcHHHHHHHHHHHHHHHHHh--hccccccCCcccEEEeHHHHHHHhhhccc
Confidence 78877777776553334666675321 11111111111000000100 001222345778899999999985311
Q ss_pred CCcCCCCcchHHHHHHH--hcCCCeEec
Q 017533 318 PILHKFANEDVSLGSWF--IGLEVEHID 343 (370)
Q Consensus 318 ~~l~~~~~EDV~lG~~l--~gL~v~~id 343 (370)
...+.|. .|+.+...+ .|+.|..++
T Consensus 184 ~~~~~fg-~eiel~~~a~~~G~rI~EVp 210 (397)
T 2bo4_A 184 RRRSDWG-IDTLYTFVTVQQGVSIYECY 210 (397)
T ss_dssp HTCCSTT-HHHHHHHHHHHTTCCEEEEE
T ss_pred CcCCCcc-hHHHHHHHHHHcCCEEEEEE
Confidence 1223333 366665444 577776554
No 13
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=39.76 E-value=1.6e+02 Score=26.38 Aligned_cols=133 Identities=12% Similarity=-0.022 Sum_probs=73.3
Q ss_pred HHHHHHhhCCCEEEeccccccccchhHHHHHHHHHHhcCCceEEEEecCc---eeecHHHHHHHHhhcCCCCceEEEEe-
Q 017533 191 AIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVDDD---VHVNLGMLATTLSRHRSKPRVYIGCM- 266 (370)
Q Consensus 191 ~I~~E~~~~~DIL~ld~~Dsy~nLt~Kt~~~~~wa~~~~~a~F~lKvDDD---vfVnl~~L~~~L~~~~~~~~lYiG~~- 266 (370)
.+..+..+.|==+++.+.++.=+.. .-.+.=.| ....++++++.+|-| +-.+++.+.++|+. ..++.+|..
T Consensus 16 ~l~~~l~~~gi~~~l~~~~SlI~ra-RN~lv~~F-l~~~~~dhllfIDAD~~~I~FdPe~V~rLl~~---g~DVV~GsYp 90 (203)
T 2c0n_A 16 PLIDFLVKNDIEYVILSRRNHVAVQ-REIALDMF-LEMKDYDTLAFLDEDVVPIEIDFQKVEAKFNE---GYDVVCGYYY 90 (203)
T ss_dssp HHHHHHHHTTCCEEEECCCSCHHHH-HHHHHHHH-HHCTTCCEEEEECTTEEEEECCHHHHHHHHHH---TCSEEEEECB
T ss_pred HHHHHHHhCCCeEEEEccccchHHH-HHHHHHHH-HhcCCCCEEEEEeCCCCccccCHHHHHHHHhC---CCCEEEEEee
Confidence 4555655555334455443221111 11122123 335789999999999 99999999999954 347888873
Q ss_pred -ecCcccccCCCccccCCccccCCCCCccCccccCCeeeecHHHHHHHHHhCC------CcCCCCcchHHHHHHHh
Q 017533 267 -KSGPVLSQKNVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISINQP------ILHKFANEDVSLGSWFI 335 (370)
Q Consensus 267 -~~~pv~rd~~~K~~~pe~w~f~y~~~~Yp~Y~~G~~YvlSrdla~~I~~~~~------~l~~~~~EDV~lG~~l~ 335 (370)
++..-. ....+.|.-.- ...=-.||+.|.-+++|.+...|....- ..+..--|||++=.-..
T Consensus 91 ~K~~~~~-s~~a~~y~~~i------~~~~V~d~~tGF~lIkR~V~e~L~~p~fl~~~~~e~~~~~gEdv~F~~~~k 159 (203)
T 2c0n_A 91 LKTLRGY-SVYRKDWEKEI------FDGEVNGCGLGFTFIKREFLEKIKRPAFLAFKPIESPHWIGEDVYFFSTHK 159 (203)
T ss_dssp CTTSSSB-SEESSSBCSSC------CCEECSEECSSEEEEEHHHHTTSCSSCCCC---------CCHHHHHHHHHC
T ss_pred ccCCCcc-chHHHHHHHhc------cCceeeeccccEEEEhHHHHHHHhhhhhhcCChhhhccccCCceEEEeccc
Confidence 221100 00011111110 0112347899999999999998855321 12334459999866554
No 14
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=39.19 E-value=64 Score=31.04 Aligned_cols=84 Identities=14% Similarity=0.211 Sum_probs=48.0
Q ss_pred HHHHHHHhcCCceEEEEecCceeecHHHH---HHHHhhcCCCCceEEEEeecCcccccCCCccc----cCCccccCCCCC
Q 017533 220 IFFSTAVAKWDADFYVKVDDDVHVNLGML---ATTLSRHRSKPRVYIGCMKSGPVLSQKNVKYH----EPEYWKFGEEGN 292 (370)
Q Consensus 220 ~~~~wa~~~~~a~F~lKvDDDvfVnl~~L---~~~L~~~~~~~~lYiG~~~~~pv~rd~~~K~~----~pe~w~f~y~~~ 292 (370)
.++.++.+...+++++.+|||..+.++=+ .+.|..+...++++ |+.+-. +.+.+.. .+...
T Consensus 89 ~al~~vf~~~~~~~vIiLEDDl~~spdF~~y~~~~l~~y~~D~~I~--~ISa~n---~~g~~~~~~~~~~~~l------- 156 (343)
T 1fo8_A 89 WALGQIFHNFNYPAAVVVEDDLEVAPDFFEYFQATYPLLKADPSLW--CVSAWN---DNGKEQMVDSSKPELL------- 156 (343)
T ss_dssp HHHHHHHTTSCCSEEEEEETTEEECTTHHHHHHHHHHHHHHCTTEE--EEESCC---TTCBGGGSCTTCTTCE-------
T ss_pred HHHHHHHHhccCCEEEEEcCCCeECHHHHHHHHHHHHHhhcCCcEE--EEeccc---CccccccccccCcceE-------
Confidence 34455554457999999999999998655 33444334556775 332110 0010001 11110
Q ss_pred ccCccccCCeeeecHHHHHHHHH
Q 017533 293 KYFRHATGQIYAISKDLATYISI 315 (370)
Q Consensus 293 ~Yp~Y~~G~~YvlSrdla~~I~~ 315 (370)
..-.|..|.|+++++++-+.+-.
T Consensus 157 yrs~~f~~wGWa~wr~~W~e~~~ 179 (343)
T 1fo8_A 157 YRTDFFPGLGWLLLAELWAELEP 179 (343)
T ss_dssp EEESSCCCSSEEEEHHHHHHHGG
T ss_pred EeecCCCchhhhhcHHHHHHHhh
Confidence 12234578999999999887644
No 15
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=35.04 E-value=20 Score=33.55 Aligned_cols=46 Identities=13% Similarity=0.013 Sum_probs=32.2
Q ss_pred HHHHHHhcCCceEEEEecCcee-ecHHHHHHHHhhcC--CCCceEEEEe
Q 017533 221 FFSTAVAKWDADFYVKVDDDVH-VNLGMLATTLSRHR--SKPRVYIGCM 266 (370)
Q Consensus 221 ~~~wa~~~~~a~F~lKvDDDvf-Vnl~~L~~~L~~~~--~~~~lYiG~~ 266 (370)
.+..+.+....+|++.+|+|.. +..+.|..++.... +.-.+..|..
T Consensus 122 a~n~g~~~a~gd~i~~lD~D~~~~~p~~l~~l~~~l~~~~~~~~v~g~~ 170 (329)
T 3ckj_A 122 ALWRSLAASRGDIVVFVDSDLINPHPMFVPWLVGPLLTGDGVHLVKSFY 170 (329)
T ss_dssp HHHHHHHHCCCSEEEECCTTEESCCTTHHHHHHHHHHSCSSCCEEEEEE
T ss_pred HHHHHHHhCCCCEEEEECCCCCCcChHHHHHHHHHHHhCCCccEEEEEe
Confidence 3444555567899999999999 88888877776632 2335666654
No 16
>1vf5_H Protein PET N; photosynthesis, membrane protein complex, electron transfer complex; HET: HEM TDS PL9 OPC CLA BCR; 3.00A {Mastigocladus laminosus} SCOP: f.23.27.1 PDB: 2d2c_H* 2e74_H* 2e75_H* 2e76_H* 2zt9_H*
Probab=21.68 E-value=54 Score=20.39 Aligned_cols=23 Identities=9% Similarity=0.433 Sum_probs=19.8
Q ss_pred ccchhHHHHHHHHHHHHHHHhcC
Q 017533 11 ISTKWIPFVCLFCFALGILFSNL 33 (370)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~r 33 (370)
++--|+.++.+|+|-+.+.+=||
T Consensus 4 vsl~WaalmvvftfSlslVVWGR 26 (29)
T 1vf5_H 4 DVLGWVALLVVFTWSIAMVVWGR 26 (29)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHhheeeeEEEEec
Confidence 45679999999999999988776
No 17
>1omz_A Alpha-1,4-N-acetylhexosaminyltransferase EXTL2; rossmann fold, DXD motif; HET: UD2; 2.10A {Mus musculus} SCOP: c.68.1.15 PDB: 1omx_A* 1on6_A* 1on8_A*
Probab=20.72 E-value=82 Score=29.83 Aligned_cols=38 Identities=24% Similarity=0.288 Sum_probs=31.2
Q ss_pred CCceEEEEecCceeecHHHHHHHHhhcCCCCceEEEEe
Q 017533 229 WDADFYVKVDDDVHVNLGMLATTLSRHRSKPRVYIGCM 266 (370)
Q Consensus 229 ~~a~F~lKvDDDvfVnl~~L~~~L~~~~~~~~lYiG~~ 266 (370)
...+-|+-+|||+.++.+.|.......+..|+-.+|..
T Consensus 105 i~T~AVLslDDDv~l~~~el~faF~vWr~~PdRlVGf~ 142 (293)
T 1omz_A 105 VETNAVLMVDDDTLISAQDLVFAFSIWQQFPDQIIGFV 142 (293)
T ss_dssp CCSSEEEEECTTEEECHHHHHHHHHHHTTSTTSEEESC
T ss_pred CCcCEEEEEcCCCCCCHHHHHHHHHHHHHCccceecCc
Confidence 36789999999999999999888887776666567864
Done!