Query 017535
Match_columns 370
No_of_seqs 582 out of 2529
Neff 11.2
Searched_HMMs 46136
Date Fri Mar 29 09:26:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017535.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017535hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG2271 UhpC Sugar phosphate p 99.9 3.8E-22 8.2E-27 169.5 16.8 227 5-242 177-415 (448)
2 COG2814 AraJ Arabinose efflux 99.8 4.9E-19 1.1E-23 152.5 22.1 208 2-240 156-365 (394)
3 TIGR00892 2A0113 monocarboxyla 99.8 6E-19 1.3E-23 160.9 17.2 228 4-240 164-400 (455)
4 KOG1330 Sugar transporter/spin 99.8 2.1E-19 4.6E-24 154.4 13.1 236 2-241 176-418 (493)
5 PRK11273 glpT sn-glycerol-3-ph 99.8 1.2E-17 2.6E-22 152.6 23.1 223 9-240 183-414 (452)
6 PRK09556 uhpT sugar phosphate 99.8 2.8E-17 6.1E-22 150.8 24.3 213 11-234 189-411 (467)
7 PRK11663 regulatory protein Uh 99.8 9E-18 1.9E-22 152.6 20.5 225 4-236 168-400 (434)
8 TIGR00792 gph sugar (Glycoside 99.8 2.9E-17 6.2E-22 149.8 23.7 209 8-241 168-385 (437)
9 TIGR00893 2A0114 d-galactonate 99.8 2.3E-17 5E-22 148.2 20.9 227 4-236 139-374 (399)
10 PLN00028 nitrate transmembrane 99.8 2.7E-17 5.9E-22 150.8 21.3 207 9-228 194-402 (476)
11 PRK03545 putative arabinose tr 99.8 4.8E-17 1E-21 145.9 21.7 202 3-236 153-356 (390)
12 PRK10642 proline/glycine betai 99.8 3.4E-17 7.4E-22 151.0 20.9 141 86-236 264-405 (490)
13 KOG2532 Permease of the major 99.8 3E-18 6.5E-23 153.8 13.5 229 3-234 184-418 (466)
14 TIGR00890 2A0111 Oxalate/Forma 99.8 1.1E-16 2.3E-21 143.0 23.0 210 7-239 150-360 (377)
15 TIGR00881 2A0104 phosphoglycer 99.8 5.4E-17 1.2E-21 145.0 20.5 228 5-241 142-377 (379)
16 PRK10489 enterobactin exporter 99.8 5.5E-17 1.2E-21 146.9 20.1 209 3-236 166-375 (417)
17 TIGR00903 2A0129 major facilit 99.8 8.1E-17 1.8E-21 142.3 20.7 206 3-233 134-340 (368)
18 COG2211 MelB Na+/melibiose sym 99.8 1.5E-15 3.1E-20 133.9 26.7 212 9-242 182-402 (467)
19 TIGR00894 2A0114euk Na(+)-depe 99.8 2.2E-17 4.7E-22 151.6 15.9 226 4-235 188-422 (465)
20 PRK15402 multidrug efflux syst 99.8 2.2E-16 4.8E-21 142.5 22.2 211 4-236 158-371 (406)
21 PRK11551 putative 3-hydroxyphe 99.8 9.9E-17 2.2E-21 144.8 19.7 210 5-236 161-371 (406)
22 TIGR00712 glpT glycerol-3-phos 99.8 9E-17 2E-21 146.3 19.5 221 8-239 180-411 (438)
23 PRK10429 melibiose:sodium symp 99.8 5E-16 1.1E-20 142.6 24.5 213 10-241 177-398 (473)
24 PRK11010 ampG muropeptide tran 99.8 3.7E-16 8E-21 143.7 23.1 212 5-239 165-381 (491)
25 TIGR00897 2A0118 polyol permea 99.7 8.5E-16 1.8E-20 138.3 24.6 213 4-236 163-377 (402)
26 PRK12307 putative sialic acid 99.7 1.7E-16 3.7E-21 144.2 20.2 161 65-236 220-384 (426)
27 PRK10504 putative transporter; 99.7 3.4E-16 7.5E-21 144.0 20.7 162 68-240 256-419 (471)
28 TIGR02718 sider_RhtX_FptX side 99.7 8.6E-16 1.9E-20 137.8 22.5 211 5-239 155-369 (390)
29 PRK09528 lacY galactoside perm 99.7 1.2E-16 2.5E-21 144.8 15.9 210 10-240 167-382 (420)
30 TIGR00899 2A0120 sugar efflux 99.7 4.7E-16 1E-20 138.9 19.6 206 3-239 145-352 (375)
31 PRK09669 putative symporter Ya 99.7 3.1E-15 6.8E-20 136.4 24.1 207 9-241 179-393 (444)
32 TIGR00900 2A0121 H+ Antiporter 99.7 4.3E-16 9.2E-21 138.5 18.1 214 3-236 148-364 (365)
33 PRK15011 sugar efflux transpor 99.7 1.7E-15 3.8E-20 135.9 22.0 202 3-236 163-367 (393)
34 COG2223 NarK Nitrate/nitrite t 99.7 1.2E-15 2.5E-20 130.5 18.9 208 6-237 162-377 (417)
35 PRK14995 methyl viologen resis 99.7 9.2E-16 2E-20 141.6 20.0 225 2-236 150-414 (495)
36 TIGR02332 HpaX 4-hydroxyphenyl 99.7 3.9E-16 8.3E-21 140.8 17.0 221 8-241 163-401 (412)
37 PRK11462 putative transporter; 99.7 1.9E-14 4.2E-19 131.2 28.2 205 10-241 180-392 (460)
38 PF11700 ATG22: Vacuole efflux 99.7 6.5E-15 1.4E-19 133.3 24.4 219 9-238 222-445 (477)
39 PRK09705 cynX putative cyanate 99.7 1.1E-15 2.4E-20 137.0 19.2 158 68-239 200-359 (393)
40 PRK10406 alpha-ketoglutarate t 99.7 2.9E-15 6.2E-20 136.2 21.9 202 9-236 194-399 (432)
41 TIGR00902 2A0127 phenyl propri 99.7 2.2E-15 4.9E-20 134.7 20.5 207 3-236 148-356 (382)
42 PRK09952 shikimate transporter 99.7 2.3E-15 4.9E-20 136.9 20.9 210 8-236 194-407 (438)
43 PRK03699 putative transporter; 99.7 2E-15 4.2E-20 135.7 20.0 201 7-239 156-358 (394)
44 TIGR00710 efflux_Bcr_CflA drug 99.7 3.1E-15 6.8E-20 134.0 21.2 207 3-231 149-357 (385)
45 TIGR00889 2A0110 nucleoside tr 99.7 1.9E-15 4.1E-20 136.4 19.3 163 66-237 201-373 (418)
46 PRK15034 nitrate/nitrite trans 99.7 5.6E-15 1.2E-19 132.0 21.7 203 9-239 207-432 (462)
47 PRK10091 MFS transport protein 99.7 6.6E-15 1.4E-19 131.7 22.3 207 3-240 147-355 (382)
48 PRK15075 citrate-proton sympor 99.7 4.1E-15 8.8E-20 135.3 20.2 140 88-236 254-395 (434)
49 TIGR00711 efflux_EmrB drug res 99.7 1.9E-15 4E-20 139.8 18.2 225 2-236 145-411 (485)
50 PRK10213 nepI ribonucleoside t 99.7 1.8E-14 3.8E-19 129.3 22.4 202 3-236 164-367 (394)
51 PRK09874 drug efflux system pr 99.7 7.4E-15 1.6E-19 132.7 20.0 206 4-236 163-374 (408)
52 PF13347 MFS_2: MFS/sugar tran 99.7 2.3E-14 5E-19 130.1 23.3 207 11-242 175-390 (428)
53 TIGR00883 2A0106 metabolite-pr 99.7 1.9E-15 4.1E-20 135.7 16.1 207 8-236 165-376 (394)
54 PRK11043 putative transporter; 99.7 8E-15 1.7E-19 132.1 20.1 207 3-235 150-357 (401)
55 PRK11902 ampG muropeptide tran 99.7 2.1E-14 4.6E-19 129.3 22.6 207 6-239 153-368 (402)
56 PRK09848 glucuronide transport 99.7 2.1E-14 4.6E-19 131.2 22.7 168 62-241 217-393 (448)
57 PRK03893 putative sialic acid 99.7 5.1E-15 1.1E-19 137.3 17.4 135 91-236 294-429 (496)
58 PRK15403 multidrug efflux syst 99.6 3E-14 6.5E-19 128.5 21.4 212 3-235 160-373 (413)
59 TIGR00895 2A0115 benzoate tran 99.6 2.4E-15 5.1E-20 135.3 14.2 217 3-232 161-397 (398)
60 PRK11646 multidrug resistance 99.6 3.8E-14 8.2E-19 127.4 21.9 207 3-239 155-363 (400)
61 COG2807 CynX Cyanate permease 99.6 1.9E-14 4.2E-19 120.5 18.1 201 10-240 162-364 (395)
62 PRK11102 bicyclomycin/multidru 99.6 2.9E-14 6.3E-19 127.4 20.5 203 3-227 135-341 (377)
63 TIGR00882 2A0105 oligosacchari 99.6 4.1E-14 9E-19 127.2 21.0 214 4-239 154-373 (396)
64 TIGR00901 2A0125 AmpG-related 99.6 1.3E-14 2.8E-19 128.7 17.3 190 11-219 155-355 (356)
65 PRK10077 xylE D-xylose transpo 99.6 2.4E-14 5.3E-19 132.1 19.7 132 93-233 292-424 (479)
66 TIGR00891 2A0112 putative sial 99.6 1.6E-14 3.5E-19 130.3 18.0 140 89-240 255-395 (405)
67 PF07690 MFS_1: Major Facilita 99.6 2.2E-15 4.7E-20 133.3 12.0 208 3-226 141-352 (352)
68 TIGR00879 SP MFS transporter, 99.6 1.4E-14 3.1E-19 133.5 17.8 140 92-241 304-450 (481)
69 PRK11128 putative 3-phenylprop 99.6 3.9E-14 8.5E-19 126.7 20.0 208 2-236 147-356 (382)
70 PRK11652 emrD multidrug resist 99.6 9.6E-14 2.1E-18 124.8 22.3 207 3-235 152-360 (394)
71 PRK06814 acylglycerophosphoeth 99.6 2.9E-14 6.3E-19 144.9 20.1 218 2-236 163-397 (1140)
72 PF05977 MFS_3: Transmembrane 99.6 4.1E-14 9E-19 129.5 19.1 211 2-236 158-370 (524)
73 TIGR01272 gluP glucose/galacto 99.6 8.8E-14 1.9E-18 120.1 20.2 199 10-236 89-291 (310)
74 KOG2533 Permease of the major 99.6 3.5E-15 7.6E-20 134.5 11.4 126 8-135 201-337 (495)
75 PRK10473 multidrug efflux syst 99.6 7E-14 1.5E-18 125.6 19.6 201 4-236 148-350 (392)
76 TIGR01299 synapt_SV2 synaptic 99.6 1.8E-13 3.9E-18 129.7 22.3 110 113-235 601-710 (742)
77 TIGR00896 CynX cyanate transpo 99.6 5.6E-14 1.2E-18 124.5 17.8 161 67-240 191-353 (355)
78 PRK05122 major facilitator sup 99.6 1.7E-13 3.6E-18 123.5 20.8 131 91-236 235-365 (399)
79 KOG2504 Monocarboxylate transp 99.6 3.6E-14 7.9E-19 129.2 15.2 165 67-242 292-457 (509)
80 PRK10133 L-fucose transporter; 99.6 4.6E-13 9.9E-18 121.6 21.2 158 63-236 248-408 (438)
81 PRK10054 putative transporter; 99.6 8.5E-14 1.8E-18 124.9 15.3 200 9-236 157-360 (395)
82 COG2270 Permeases of the major 99.6 3.6E-13 7.7E-18 115.5 17.4 211 8-238 194-406 (438)
83 PRK03633 putative MFS family t 99.5 1.1E-12 2.3E-17 117.5 20.2 153 68-236 195-348 (381)
84 TIGR00886 2A0108 nitrite extru 99.5 5E-13 1.1E-17 119.0 18.0 201 9-222 162-366 (366)
85 TIGR00887 2A0109 phosphate:H+ 99.5 4E-13 8.6E-18 124.5 17.7 140 88-236 304-455 (502)
86 COG2271 UhpC Sugar phosphate p 99.5 1.8E-13 3.9E-18 117.2 13.9 129 95-236 52-182 (448)
87 PRK08633 2-acyl-glycerophospho 99.5 1.2E-12 2.7E-17 133.4 22.7 161 61-234 220-383 (1146)
88 PRK11195 lysophospholipid tran 99.5 1.3E-12 2.9E-17 117.1 20.3 210 3-236 144-356 (393)
89 PRK12382 putative transporter; 99.5 1.4E-12 3.1E-17 117.1 20.5 133 91-239 235-367 (392)
90 KOG0569 Permease of the major 99.5 1.6E-12 3.5E-17 116.0 19.9 251 6-295 177-461 (485)
91 PRK10489 enterobactin exporter 99.5 7.5E-13 1.6E-17 119.9 18.2 166 62-236 6-173 (417)
92 PF03825 Nuc_H_symport: Nucleo 99.5 5.9E-12 1.3E-16 112.0 23.1 163 65-236 199-365 (400)
93 TIGR00885 fucP L-fucose:H+ sym 99.5 1.6E-12 3.5E-17 117.0 19.7 198 9-236 182-382 (410)
94 KOG3626 Organic anion transpor 99.5 2.6E-12 5.7E-17 118.5 20.1 265 11-283 320-693 (735)
95 PRK10054 putative transporter; 99.5 1.8E-12 4E-17 116.3 18.9 147 75-234 9-157 (395)
96 cd06174 MFS The Major Facilita 99.5 2.7E-12 6E-17 113.3 18.8 182 4-236 144-328 (352)
97 PRK15462 dipeptide/tripeptide 99.5 2.3E-12 5E-17 116.7 18.2 150 75-236 11-165 (493)
98 TIGR00924 yjdL_sub1_fam amino 99.5 1.8E-12 3.9E-17 118.8 17.7 155 69-236 5-168 (475)
99 TIGR00900 2A0121 H+ Antiporter 99.5 2E-12 4.3E-17 115.0 17.3 135 93-236 20-155 (365)
100 TIGR00805 oat sodium-independe 99.5 1.6E-11 3.4E-16 116.0 23.7 269 12-287 259-630 (633)
101 TIGR00712 glpT glycerol-3-phos 99.5 3.4E-12 7.4E-17 116.3 18.5 132 94-235 49-180 (438)
102 PRK11646 multidrug resistance 99.5 6.6E-12 1.4E-16 112.9 19.4 149 73-234 11-160 (400)
103 TIGR00898 2A0119 cation transp 99.5 5E-12 1.1E-16 117.5 18.5 152 65-230 315-467 (505)
104 PRK11663 regulatory protein Uh 99.4 1.1E-11 2.4E-16 112.8 19.6 134 90-236 41-174 (434)
105 TIGR00895 2A0115 benzoate tran 99.4 6.9E-12 1.5E-16 112.8 17.5 134 93-240 38-171 (398)
106 PRK10207 dipeptide/tripeptide 99.4 7.2E-12 1.6E-16 115.0 17.5 150 75-236 16-170 (489)
107 COG0738 FucP Fucose permease [ 99.4 2.7E-11 5.8E-16 103.5 19.4 197 11-236 187-385 (422)
108 PRK09584 tppB putative tripept 99.4 2E-11 4.3E-16 112.6 20.3 157 68-236 15-177 (500)
109 PRK05122 major facilitator sup 99.4 5.1E-12 1.1E-16 113.8 16.1 157 72-236 14-175 (399)
110 PF05977 MFS_3: Transmembrane 99.4 1.5E-11 3.4E-16 112.7 19.0 160 68-236 5-166 (524)
111 PRK12382 putative transporter; 99.4 4.3E-12 9.4E-17 114.0 15.1 157 72-236 14-175 (392)
112 TIGR01299 synapt_SV2 synaptic 99.4 2E-11 4.3E-16 116.0 19.8 130 94-236 189-318 (742)
113 TIGR00891 2A0112 putative sial 99.4 1.9E-11 4.2E-16 110.3 18.7 131 93-236 33-163 (405)
114 TIGR00788 fbt folate/biopterin 99.4 1E-12 2.2E-17 120.1 10.0 225 3-236 178-414 (468)
115 TIGR00893 2A0114 d-galactonate 99.4 8.1E-12 1.7E-16 112.2 15.6 130 94-236 16-145 (399)
116 PRK10504 putative transporter; 99.4 1.5E-11 3.4E-16 113.2 17.7 149 75-236 12-161 (471)
117 TIGR00710 efflux_Bcr_CflA drug 99.4 1.3E-11 2.9E-16 110.6 16.7 131 93-236 26-156 (385)
118 PRK03545 putative arabinose tr 99.4 1.8E-11 3.9E-16 110.0 17.5 131 93-236 30-160 (390)
119 TIGR02332 HpaX 4-hydroxyphenyl 99.4 3E-11 6.4E-16 109.1 18.8 142 81-235 16-158 (412)
120 COG2814 AraJ Arabinose efflux 99.4 2.9E-11 6.2E-16 104.9 17.4 149 75-236 16-164 (394)
121 PRK10473 multidrug efflux syst 99.4 3.9E-11 8.4E-16 107.9 17.9 131 93-236 24-154 (392)
122 PRK14995 methyl viologen resis 99.4 2.7E-11 5.9E-16 112.0 16.9 143 81-236 14-158 (495)
123 PRK10213 nepI ribonucleoside t 99.4 3.5E-11 7.6E-16 108.0 17.1 135 89-236 37-171 (394)
124 PRK03699 putative transporter; 99.4 1.3E-10 2.8E-15 104.5 20.8 130 93-235 28-157 (394)
125 PRK15034 nitrate/nitrite trans 99.4 9.1E-11 2E-15 105.2 19.4 155 69-232 30-186 (462)
126 PLN00028 nitrate transmembrane 99.4 2.1E-10 4.4E-15 105.6 22.3 129 93-235 57-185 (476)
127 PRK10091 MFS transport protein 99.4 4.6E-11 1E-15 106.9 17.1 135 89-236 20-154 (382)
128 PRK11273 glpT sn-glycerol-3-ph 99.4 1.1E-10 2.5E-15 106.8 19.7 126 94-229 51-176 (452)
129 TIGR00897 2A0118 polyol permea 99.3 4.1E-11 9E-16 108.0 16.5 150 78-236 19-169 (402)
130 PRK11195 lysophospholipid tran 99.3 3.7E-11 8E-16 107.8 16.1 148 73-236 3-151 (393)
131 PF06609 TRI12: Fungal trichot 99.3 5E-10 1.1E-14 102.8 23.4 157 68-234 304-466 (599)
132 TIGR00711 efflux_EmrB drug res 99.3 1.7E-11 3.7E-16 113.4 14.2 134 93-240 23-156 (485)
133 PRK11551 putative 3-hydroxyphe 99.3 6.8E-11 1.5E-15 106.8 17.6 131 93-236 36-166 (406)
134 KOG4686 Predicted sugar transp 99.3 9.3E-12 2E-16 100.8 10.1 154 73-240 264-419 (459)
135 PRK09874 drug efflux system pr 99.3 1.5E-10 3.3E-15 104.6 19.3 146 77-236 18-169 (408)
136 TIGR00886 2A0108 nitrite extru 99.3 5.3E-11 1.1E-15 105.9 16.0 147 76-235 4-152 (366)
137 TIGR00903 2A0129 major facilit 99.3 6.9E-11 1.5E-15 104.7 16.5 130 93-236 12-141 (368)
138 PRK11102 bicyclomycin/multidru 99.3 4.8E-11 1E-15 106.7 15.7 131 93-236 12-142 (377)
139 PF07690 MFS_1: Major Facilita 99.3 1.2E-11 2.6E-16 109.4 11.7 131 93-236 17-148 (352)
140 PRK11652 emrD multidrug resist 99.3 1.4E-10 3E-15 104.4 18.6 131 93-236 29-159 (394)
141 PRK12307 putative sialic acid 99.3 6.5E-11 1.4E-15 107.7 16.3 130 94-236 40-169 (426)
142 PF01306 LacY_symp: LacY proto 99.3 1.2E-09 2.6E-14 95.9 23.1 162 62-236 209-376 (412)
143 PRK09556 uhpT sugar phosphate 99.3 4.3E-11 9.2E-16 110.0 14.8 134 93-235 50-184 (467)
144 cd06174 MFS The Major Facilita 99.3 2.2E-10 4.8E-15 101.1 18.5 133 91-236 18-150 (352)
145 PRK11043 putative transporter; 99.3 2.9E-10 6.3E-15 102.6 19.5 128 96-236 30-157 (401)
146 TIGR00881 2A0104 phosphoglycer 99.3 7.9E-12 1.7E-16 111.6 9.0 130 93-235 16-146 (379)
147 PRK09528 lacY galactoside perm 99.3 5.7E-11 1.2E-15 107.8 14.6 159 68-235 5-167 (420)
148 PRK03633 putative MFS family t 99.3 1.3E-10 2.8E-15 104.1 16.5 149 74-235 7-156 (381)
149 COG2223 NarK Nitrate/nitrite t 99.3 2.1E-10 4.6E-15 98.6 16.4 152 72-236 13-166 (417)
150 PRK09705 cynX putative cyanate 99.3 4.6E-10 9.9E-15 100.9 19.5 130 93-236 30-159 (393)
151 PRK03893 putative sialic acid 99.3 1.5E-10 3.2E-15 107.6 16.5 146 78-236 25-171 (496)
152 TIGR00885 fucP L-fucose:H+ sym 99.3 4.7E-10 1E-14 101.1 19.1 148 78-235 8-156 (410)
153 KOG2563 Permease of the major 99.3 1.1E-10 2.5E-15 100.9 14.0 212 9-237 208-423 (480)
154 PRK15402 multidrug efflux syst 99.3 3.1E-10 6.8E-15 102.5 17.8 130 94-236 35-164 (406)
155 TIGR00890 2A0111 Oxalate/Forma 99.3 1.7E-10 3.7E-15 103.0 15.8 133 89-235 20-152 (377)
156 KOG0253 Synaptic vesicle trans 99.3 2.8E-10 6.2E-15 95.8 15.5 101 116-229 390-490 (528)
157 PRK15403 multidrug efflux syst 99.3 5.1E-10 1.1E-14 101.1 18.1 129 95-236 39-167 (413)
158 PRK11902 ampG muropeptide tran 99.3 9E-10 1.9E-14 99.3 19.5 140 86-236 12-157 (402)
159 TIGR00899 2A0120 sugar efflux 99.2 3.4E-10 7.3E-15 101.1 16.2 133 92-236 17-152 (375)
160 PRK10207 dipeptide/tripeptide 99.2 1.3E-09 2.8E-14 100.2 20.2 163 69-232 263-438 (489)
161 TIGR00894 2A0114euk Na(+)-depe 99.2 1.4E-10 3.1E-15 106.6 12.3 131 101-242 70-200 (465)
162 TIGR00882 2A0105 oligosacchari 99.2 4E-10 8.6E-15 101.5 14.3 154 72-235 1-159 (396)
163 TIGR00887 2A0109 phosphate:H+ 99.2 3.6E-09 7.8E-14 98.2 20.7 124 103-235 52-177 (502)
164 PTZ00207 hypothetical protein; 99.2 1.7E-09 3.8E-14 99.9 18.0 137 87-233 42-179 (591)
165 PRK10077 xylE D-xylose transpo 99.2 1.2E-09 2.7E-14 100.9 16.8 124 102-233 50-180 (479)
166 PRK08633 2-acyl-glycerophospho 99.2 7.4E-10 1.6E-14 113.3 16.7 158 68-235 4-165 (1146)
167 TIGR00806 rfc RFC reduced fola 99.2 2.2E-09 4.7E-14 95.2 16.5 132 93-240 46-179 (511)
168 KOG1330 Sugar transporter/spin 99.2 3E-11 6.5E-16 104.8 4.8 151 77-240 37-188 (493)
169 PRK06814 acylglycerophosphoeth 99.2 9.7E-10 2.1E-14 112.2 16.5 120 107-236 52-171 (1140)
170 PRK10133 L-fucose transporter; 99.2 4.8E-09 1E-13 95.4 19.3 131 93-233 47-177 (438)
171 TIGR00879 SP MFS transporter, 99.2 1.2E-09 2.6E-14 100.7 15.5 116 104-229 68-183 (481)
172 TIGR00892 2A0113 monocarboxyla 99.1 1.8E-09 3.9E-14 98.8 16.4 130 93-236 40-170 (455)
173 PRK11128 putative 3-phenylprop 99.1 1.7E-09 3.7E-14 96.8 15.8 132 92-236 24-155 (382)
174 PRK15011 sugar efflux transpor 99.1 4.3E-09 9.2E-14 94.6 18.3 155 69-236 12-170 (393)
175 PRK11010 ampG muropeptide tran 99.1 8.5E-09 1.8E-13 95.2 20.2 154 71-235 10-169 (491)
176 KOG3764 Vesicular amine transp 99.1 2.6E-10 5.6E-15 97.0 9.3 210 2-240 215-433 (464)
177 TIGR00924 yjdL_sub1_fam amino 99.1 1.1E-08 2.3E-13 94.1 20.7 142 93-235 293-443 (475)
178 TIGR00901 2A0125 AmpG-related 99.1 3.5E-09 7.5E-14 93.9 16.7 132 94-236 10-146 (356)
179 KOG2532 Permease of the major 99.1 9.5E-10 2E-14 99.4 12.6 130 101-241 67-196 (466)
180 PF03209 PUCC: PUCC protein; 99.1 4.9E-08 1.1E-12 84.5 22.1 166 61-236 196-364 (403)
181 PF03137 OATP: Organic Anion T 99.1 1.2E-11 2.7E-16 113.7 0.0 223 11-236 227-515 (539)
182 PRK10406 alpha-ketoglutarate t 99.1 6.3E-09 1.4E-13 94.8 17.4 136 89-233 38-184 (432)
183 TIGR00902 2A0127 phenyl propri 99.1 3.1E-09 6.8E-14 95.1 14.9 139 87-239 18-157 (382)
184 TIGR00898 2A0119 cation transp 99.1 2.1E-09 4.6E-14 100.0 13.5 126 95-233 112-240 (505)
185 TIGR00805 oat sodium-independe 99.1 8.8E-10 1.9E-14 104.2 10.4 133 94-236 55-235 (633)
186 TIGR00792 gph sugar (Glycoside 99.0 5.1E-09 1.1E-13 95.6 14.7 140 93-236 20-163 (437)
187 TIGR00896 CynX cyanate transpo 99.0 2E-08 4.4E-13 89.0 17.3 129 93-236 21-149 (355)
188 TIGR01301 GPH_sucrose GPH fami 99.0 1.5E-07 3.3E-12 85.3 22.5 219 11-238 195-447 (477)
189 TIGR01301 GPH_sucrose GPH fami 99.0 1.7E-08 3.6E-13 91.5 16.1 136 89-232 20-175 (477)
190 PRK10642 proline/glycine betai 99.0 1.5E-08 3.2E-13 93.9 16.2 113 113-234 63-179 (490)
191 TIGR00880 2_A_01_02 Multidrug 99.0 2.1E-09 4.5E-14 81.4 8.2 109 115-236 6-114 (141)
192 PRK10429 melibiose:sodium symp 99.0 5E-08 1.1E-12 89.9 17.6 138 91-236 25-170 (473)
193 PRK09952 shikimate transporter 99.0 3.4E-08 7.3E-13 90.1 16.2 145 81-235 30-187 (438)
194 COG3104 PTR2 Dipeptide/tripept 99.0 1.1E-08 2.5E-13 90.2 12.2 160 68-239 15-184 (498)
195 PRK15075 citrate-proton sympor 98.9 4E-08 8.6E-13 89.6 15.9 133 93-235 36-179 (434)
196 TIGR02718 sider_RhtX_FptX side 98.9 1.1E-07 2.3E-12 85.6 17.9 147 81-236 9-160 (390)
197 PRK09584 tppB putative tripept 98.9 1.1E-07 2.3E-12 88.1 18.1 116 109-228 318-437 (500)
198 COG0738 FucP Fucose permease [ 98.9 2.2E-07 4.8E-12 79.9 17.9 133 93-235 34-166 (422)
199 PF01306 LacY_symp: LacY proto 98.9 1.1E-08 2.5E-13 89.8 9.7 157 70-236 4-165 (412)
200 PRK09669 putative symporter Ya 98.9 8.1E-08 1.7E-12 87.9 15.8 138 91-236 28-173 (444)
201 KOG0569 Permease of the major 98.9 2.2E-08 4.7E-13 89.9 11.4 110 110-229 63-172 (485)
202 KOG0252 Inorganic phosphate tr 98.8 3.4E-09 7.4E-14 92.0 5.3 148 78-235 310-468 (538)
203 PRK11462 putative transporter; 98.8 2E-07 4.3E-12 85.4 16.9 140 93-236 30-173 (460)
204 KOG3764 Vesicular amine transp 98.8 2.3E-08 5E-13 85.4 9.8 127 102-242 101-228 (464)
205 KOG2615 Permease of the major 98.8 1.6E-08 3.4E-13 85.9 8.7 119 102-234 63-181 (451)
206 KOG0254 Predicted transporter 98.8 1.8E-07 3.9E-12 87.1 16.2 149 77-235 299-457 (513)
207 KOG0255 Synaptic vesicle trans 98.8 1.1E-07 2.4E-12 88.8 14.1 121 100-234 111-231 (521)
208 PF06609 TRI12: Fungal trichot 98.7 2.5E-07 5.4E-12 85.4 14.2 149 69-232 36-189 (599)
209 PF06813 Nodulin-like: Nodulin 98.7 2.7E-07 5.9E-12 75.9 12.8 140 83-232 13-154 (250)
210 PRK09848 glucuronide transport 98.7 7.9E-07 1.7E-11 81.5 17.2 126 93-222 29-159 (448)
211 TIGR00883 2A0106 metabolite-pr 98.7 5E-07 1.1E-11 81.1 15.5 108 118-234 46-157 (394)
212 PF13347 MFS_2: MFS/sugar tran 98.7 9.5E-08 2.1E-12 87.0 10.2 137 93-236 22-167 (428)
213 COG2211 MelB Na+/melibiose sym 98.7 1.5E-06 3.3E-11 77.5 17.1 144 91-238 31-178 (467)
214 PF06963 FPN1: Ferroportin1 (F 98.7 3.3E-06 7.2E-11 75.4 18.3 156 63-227 249-410 (432)
215 PF00083 Sugar_tr: Sugar (and 98.6 3.6E-11 7.7E-16 110.2 -14.5 133 93-236 274-412 (451)
216 KOG3762 Predicted transporter 98.6 6E-07 1.3E-11 79.9 12.4 164 60-236 358-523 (618)
217 PF03825 Nuc_H_symport: Nucleo 98.6 1.4E-06 3.1E-11 77.9 15.1 124 91-228 21-144 (400)
218 KOG0252 Inorganic phosphate tr 98.6 3.1E-07 6.8E-12 80.1 10.2 123 104-234 81-205 (538)
219 KOG2504 Monocarboxylate transp 98.6 1.3E-06 2.9E-11 80.2 13.8 150 75-238 45-198 (509)
220 PTZ00207 hypothetical protein; 98.6 1.6E-06 3.4E-11 80.6 14.1 203 65-287 345-554 (591)
221 PF03092 BT1: BT1 family; Int 98.5 2.1E-07 4.5E-12 84.3 7.6 226 2-236 143-381 (433)
222 TIGR00926 2A1704 Peptide:H+ sy 98.5 7.7E-06 1.7E-10 77.4 18.2 142 89-238 4-153 (654)
223 KOG2533 Permease of the major 98.5 2.3E-07 4.9E-12 84.4 7.7 124 100-236 74-197 (495)
224 TIGR00889 2A0110 nucleoside tr 98.5 2.1E-06 4.6E-11 77.8 13.3 55 85-139 14-70 (418)
225 KOG0254 Predicted transporter 98.5 3.2E-06 6.9E-11 78.8 14.7 110 108-231 90-199 (513)
226 KOG2615 Permease of the major 98.5 2.8E-06 6E-11 72.6 12.0 133 95-238 283-417 (451)
227 PF05631 DUF791: Protein of un 98.5 7.8E-05 1.7E-09 64.0 20.7 124 99-236 61-190 (354)
228 KOG0253 Synaptic vesicle trans 98.5 2.6E-05 5.5E-10 66.7 17.3 122 100-236 106-227 (528)
229 PRK15462 dipeptide/tripeptide 98.5 8E-05 1.7E-09 68.2 21.8 124 109-236 310-437 (493)
230 KOG0255 Synaptic vesicle trans 98.4 1.6E-05 3.5E-10 74.4 17.9 121 100-234 346-467 (521)
231 COG2807 CynX Cyanate permease 98.4 3.4E-05 7.4E-10 65.8 16.9 128 96-238 36-163 (395)
232 TIGR00788 fbt folate/biopterin 98.4 1.4E-05 3.1E-10 73.4 15.8 143 83-236 36-185 (468)
233 PF03209 PUCC: PUCC protein; 98.4 7E-06 1.5E-10 71.4 12.3 132 100-236 8-152 (403)
234 PF00083 Sugar_tr: Sugar (and 98.3 3.8E-09 8.2E-14 96.9 -9.2 114 107-230 46-159 (451)
235 PF12832 MFS_1_like: MFS_1 lik 98.3 7.3E-06 1.6E-10 54.2 8.6 50 90-139 18-67 (77)
236 KOG2325 Predicted transporter/ 98.2 4.9E-06 1.1E-10 74.6 7.9 149 75-233 36-189 (488)
237 KOG2816 Predicted transporter 98.2 5.7E-05 1.2E-09 68.5 14.1 220 3-236 168-393 (463)
238 TIGR00806 rfc RFC reduced fola 98.1 9.4E-06 2E-10 72.5 8.3 157 60-227 249-407 (511)
239 PF11700 ATG22: Vacuole efflux 98.0 0.00058 1.3E-08 62.6 17.5 117 109-235 72-214 (477)
240 KOG3098 Uncharacterized conser 98.0 0.0026 5.6E-08 57.3 19.9 164 60-229 227-408 (461)
241 PRK03612 spermidine synthase; 97.8 0.0028 6.2E-08 58.8 18.6 129 100-235 43-171 (521)
242 KOG2563 Permease of the major 97.8 0.00059 1.3E-08 60.2 12.8 131 96-235 68-202 (480)
243 PF03092 BT1: BT1 family; Int 97.7 0.00099 2.1E-08 60.6 13.4 136 97-241 14-155 (433)
244 PF07672 MFS_Mycoplasma: Mycop 97.7 0.002 4.3E-08 52.8 13.4 25 11-35 39-63 (267)
245 COG3104 PTR2 Dipeptide/tripept 97.7 0.015 3.4E-07 52.3 19.8 121 109-230 326-451 (498)
246 PF02487 CLN3: CLN3 protein; 97.6 0.004 8.8E-08 55.1 14.7 60 172-232 335-394 (402)
247 PF01770 Folate_carrier: Reduc 97.6 0.0026 5.7E-08 56.3 13.4 155 60-225 234-392 (412)
248 PF03137 OATP: Organic Anion T 97.5 1.1E-05 2.3E-10 74.9 -1.6 135 94-236 25-204 (539)
249 COG2270 Permeases of the major 97.5 0.0031 6.7E-08 55.4 12.3 126 93-227 36-169 (438)
250 PF13000 Acatn: Acetyl-coenzym 97.4 0.055 1.2E-06 48.9 19.9 172 60-236 265-468 (544)
251 KOG2816 Predicted transporter 97.4 0.00095 2.1E-08 60.7 9.3 103 117-236 72-175 (463)
252 PF06963 FPN1: Ferroportin1 (F 97.3 0.041 8.9E-07 49.7 18.1 143 93-236 23-176 (432)
253 COG0477 ProP Permeases of the 97.2 0.01 2.2E-07 50.8 13.7 131 94-235 24-158 (338)
254 KOG4686 Predicted sugar transp 97.2 0.00018 4E-09 59.3 2.3 134 95-238 66-201 (459)
255 TIGR00769 AAA ADP/ATP carrier 97.2 0.045 9.7E-07 50.0 17.1 43 193-235 149-191 (472)
256 KOG2325 Predicted transporter/ 97.2 0.0014 3.1E-08 59.1 7.5 47 193-240 408-454 (488)
257 KOG3574 Acetyl-CoA transporter 97.2 0.02 4.4E-07 49.7 13.7 177 60-242 252-437 (510)
258 PF05978 UNC-93: Ion channel r 97.1 0.032 6.9E-07 42.6 13.3 106 113-232 43-148 (156)
259 KOG3762 Predicted transporter 96.8 0.0019 4.2E-08 58.3 5.1 47 93-139 32-78 (618)
260 KOG3626 Organic anion transpor 96.8 0.012 2.7E-07 55.8 10.6 129 100-236 125-300 (735)
261 TIGR00939 2a57 Equilibrative N 96.8 0.16 3.6E-06 46.2 17.3 33 172-206 106-138 (437)
262 PF06779 DUF1228: Protein of u 96.5 0.028 6.1E-07 37.6 7.8 45 93-137 13-57 (85)
263 KOG0637 Sucrose transporter an 96.5 0.0031 6.8E-08 55.8 4.0 131 93-230 53-200 (498)
264 TIGR01272 gluP glucose/galacto 96.2 0.022 4.7E-07 49.4 7.8 63 172-235 10-72 (310)
265 TIGR00939 2a57 Equilibrative N 96.1 0.077 1.7E-06 48.3 10.7 55 173-228 373-427 (437)
266 KOG3810 Micronutrient transpor 95.9 0.13 2.8E-06 44.3 10.4 155 60-225 221-378 (433)
267 PF01770 Folate_carrier: Reduc 95.9 0.35 7.6E-06 43.2 13.6 128 93-234 24-154 (412)
268 KOG1479 Nucleoside transporter 95.8 0.58 1.3E-05 41.6 14.5 135 75-215 20-158 (406)
269 PF05631 DUF791: Protein of un 95.6 0.063 1.4E-06 46.5 7.7 107 13-133 195-304 (354)
270 PF00854 PTR2: POT family; In 94.9 0.075 1.6E-06 47.5 6.4 63 173-236 34-99 (372)
271 KOG3574 Acetyl-CoA transporter 94.7 0.3 6.5E-06 42.8 9.2 147 74-228 32-188 (510)
272 KOG1479 Nucleoside transporter 94.7 0.13 2.9E-06 45.5 7.2 113 109-232 284-401 (406)
273 PF02990 EMP70: Endomembrane p 94.4 1.6 3.5E-05 40.9 14.0 8 67-74 252-259 (521)
274 KOG1237 H+/oligopeptide sympor 94.1 2.4 5.1E-05 40.2 14.4 145 89-241 54-225 (571)
275 KOG4332 Predicted sugar transp 93.9 0.34 7.3E-06 40.3 7.4 40 100-139 65-104 (454)
276 COG3202 ATP/ADP translocase [E 92.7 7.8 0.00017 35.5 14.6 44 193-236 168-211 (509)
277 TIGR00769 AAA ADP/ATP carrier 92.5 8.6 0.00019 35.5 23.9 79 60-139 251-335 (472)
278 PF01733 Nucleoside_tran: Nucl 92.5 0.021 4.6E-07 49.4 -1.4 55 174-229 250-304 (309)
279 KOG4332 Predicted sugar transp 91.1 3.9 8.4E-05 34.4 10.0 142 65-216 240-387 (454)
280 PF03219 TLC: TLC ATP/ADP tran 90.3 15 0.00033 34.1 15.1 80 60-139 267-351 (491)
281 COG4262 Predicted spermidine s 89.5 14 0.0003 32.4 14.1 125 102-233 38-163 (508)
282 PF11947 DUF3464: Protein of u 88.7 2.3 4.9E-05 32.1 6.5 31 193-223 114-144 (153)
283 KOG3098 Uncharacterized conser 87.8 5.6 0.00012 36.4 9.7 110 108-231 50-160 (461)
284 PRK10263 DNA translocase FtsK; 86.7 19 0.00042 37.4 13.3 18 219-236 141-158 (1355)
285 KOG2601 Iron transporter [Inor 86.4 23 0.00051 31.5 12.7 71 69-139 24-95 (503)
286 KOG0637 Sucrose transporter an 85.3 11 0.00024 34.3 9.9 32 207-238 442-473 (498)
287 PF02487 CLN3: CLN3 protein; 84.5 6.5 0.00014 35.3 8.3 25 111-135 63-87 (402)
288 PF03547 Mem_trans: Membrane t 83.9 4 8.7E-05 36.7 6.9 17 118-134 6-22 (385)
289 KOG3880 Predicted small molecu 83.8 4.4 9.5E-05 34.8 6.4 57 172-229 342-398 (409)
290 KOG1277 Endosomal membrane pro 81.8 40 0.00088 30.6 13.0 16 5-20 219-234 (593)
291 KOG2568 Predicted membrane pro 81.7 45 0.00097 31.0 17.2 40 100-139 260-300 (518)
292 PF13000 Acatn: Acetyl-coenzym 81.6 8.1 0.00018 35.6 7.7 37 193-229 138-174 (544)
293 COG5336 Uncharacterized protei 81.0 14 0.0003 25.9 6.8 36 204-239 37-72 (116)
294 KOG1278 Endosomal membrane pro 75.8 5.2 0.00011 36.9 4.7 32 104-135 356-387 (628)
295 PF00558 Vpu: Vpu protein; In 74.9 5.3 0.00011 26.4 3.4 23 272-294 14-36 (81)
296 COG3202 ATP/ADP translocase [E 74.9 72 0.0016 29.6 21.9 78 61-138 270-353 (509)
297 KOG3097 Predicted membrane pro 70.4 75 0.0016 27.9 10.9 71 68-139 270-342 (390)
298 KOG4830 Predicted sugar transp 66.6 0.16 3.4E-06 41.9 -6.0 34 93-126 222-256 (412)
299 TIGR00880 2_A_01_02 Multidrug 66.2 46 0.00099 23.9 11.8 31 107-137 87-117 (141)
300 PHA03237 envelope glycoprotein 64.7 1.1E+02 0.0024 27.8 12.5 7 8-14 18-24 (424)
301 TIGR00926 2A1704 Peptide:H+ sy 64.4 1.5E+02 0.0032 29.1 15.0 24 9-32 157-180 (654)
302 PF01810 LysE: LysE type trans 63.3 73 0.0016 25.1 13.2 24 115-138 141-164 (191)
303 PF12273 RCR: Chitin synthesis 63.2 3.7 8E-05 30.3 1.0 20 13-32 1-20 (130)
304 PF03219 TLC: TLC ATP/ADP tran 63.2 1.3E+02 0.0029 28.1 21.9 36 101-136 170-205 (491)
305 KOG3817 Uncharacterized conser 61.5 17 0.00037 31.5 4.6 17 123-139 175-191 (452)
306 COG5336 Uncharacterized protei 60.5 57 0.0012 23.0 6.8 23 117-139 52-74 (116)
307 PF10183 ESSS: ESSS subunit of 59.4 13 0.00029 26.1 3.2 31 8-38 55-85 (105)
308 KOG2927 Membrane component of 51.1 48 0.001 28.9 5.6 17 175-191 192-208 (372)
309 PF09930 DUF2162: Predicted tr 47.2 1.6E+02 0.0035 24.2 12.0 37 100-139 124-160 (224)
310 COG4698 Uncharacterized protei 47.1 28 0.0006 27.0 3.3 22 12-33 11-32 (197)
311 KOG1237 H+/oligopeptide sympor 47.1 2.7E+02 0.0059 26.8 11.4 65 171-236 457-521 (571)
312 PF05297 Herpes_LMP1: Herpesvi 47.0 6.4 0.00014 32.8 0.0 20 15-34 23-42 (381)
313 PF14851 FAM176: FAM176 family 45.6 20 0.00043 27.2 2.4 14 263-276 21-34 (153)
314 KOG4830 Predicted sugar transp 43.2 42 0.00091 28.3 4.1 48 93-140 38-94 (412)
315 PF13386 DsbD_2: Cytochrome C 42.6 1.7E+02 0.0038 23.3 12.8 36 103-138 146-181 (199)
316 PF03606 DcuC: C4-dicarboxylat 40.9 3E+02 0.0066 25.6 13.2 12 128-139 105-116 (465)
317 COG4177 LivM ABC-type branched 40.0 2.6E+02 0.0055 24.5 8.9 26 12-37 156-181 (314)
318 PF15061 DUF4538: Domain of un 39.8 39 0.00085 20.7 2.6 26 10-35 3-28 (58)
319 PF09911 DUF2140: Uncharacteri 39.8 30 0.00064 27.5 2.7 15 11-25 2-16 (187)
320 COG1480 Predicted membrane-ass 39.7 3.7E+02 0.008 26.3 13.7 23 8-30 270-292 (700)
321 cd02432 Nodulin-21_like_1 Nodu 39.6 2.1E+02 0.0046 23.4 9.7 33 118-150 172-204 (218)
322 COG1288 Predicted membrane pro 39.4 2.1E+02 0.0045 26.2 7.9 28 2-29 208-235 (481)
323 cd02434 Nodulin-21_like_3 Nodu 37.5 2.3E+02 0.005 23.3 9.2 21 120-140 180-200 (225)
324 COG5393 Predicted membrane pro 36.1 1.6E+02 0.0035 21.1 8.1 22 262-283 80-102 (131)
325 PF04341 DUF485: Protein of un 35.9 1.4E+02 0.0031 20.3 6.1 38 78-115 21-60 (91)
326 PF11872 DUF3392: Protein of u 35.3 1.6E+02 0.0035 20.8 10.3 42 65-106 40-85 (106)
327 COG1268 BioY Uncharacterized c 33.8 1.1E+02 0.0025 24.1 5.0 22 116-137 91-112 (184)
328 PF14068 YuiB: Putative membra 32.7 1.7E+02 0.0037 20.3 7.5 24 115-138 75-98 (102)
329 PF04226 Transgly_assoc: Trans 31.7 1.1E+02 0.0024 17.9 4.3 18 119-136 3-20 (48)
330 PHA02692 hypothetical protein; 30.7 83 0.0018 20.1 3.0 10 9-18 42-51 (70)
331 PF12832 MFS_1_like: MFS_1 lik 30.6 1.6E+02 0.0034 19.3 6.2 31 206-236 32-62 (77)
332 PTZ00370 STEVOR; Provisional 29.5 1.5E+02 0.0032 25.3 5.1 19 275-293 269-287 (296)
333 PF15086 UPF0542: Uncharacteri 29.5 1.6E+02 0.0035 19.0 6.4 13 275-287 35-47 (74)
334 PF06939 DUF1286: Protein of u 28.7 1.8E+02 0.004 20.6 4.7 15 122-136 34-48 (114)
335 PF15048 OSTbeta: Organic solu 27.9 48 0.001 24.0 1.9 24 257-280 30-53 (125)
336 PF01733 Nucleoside_tran: Nucl 26.5 22 0.00047 30.9 0.0 22 183-206 8-29 (309)
337 cd02433 Nodulin-21_like_2 Nodu 26.3 3.8E+02 0.0082 22.2 9.4 21 119-139 188-208 (234)
338 PF01405 PsbT: Photosystem II 25.9 1.1E+02 0.0023 15.8 2.9 8 32-39 21-28 (29)
339 PF02694 UPF0060: Uncharacteri 25.8 68 0.0015 22.6 2.3 32 107-138 54-85 (107)
340 PRK02237 hypothetical protein; 25.7 1.2E+02 0.0026 21.4 3.5 32 107-138 56-87 (109)
341 PF12597 DUF3767: Protein of u 25.2 2.4E+02 0.0052 20.5 5.1 11 275-285 78-88 (118)
342 PHA03054 IMV membrane protein; 25.1 1.4E+02 0.003 19.1 3.3 17 11-27 45-61 (72)
343 PHA02844 putative transmembran 24.9 1.4E+02 0.003 19.4 3.3 17 11-27 45-61 (75)
344 PRK03612 spermidine synthase; 24.6 6.1E+02 0.013 24.1 12.2 28 108-135 55-82 (521)
345 PHA02819 hypothetical protein; 24.5 1.4E+02 0.0031 19.1 3.3 17 11-27 43-59 (71)
346 PF07857 DUF1632: CEO family ( 24.5 3.2E+02 0.0069 23.0 6.4 18 19-36 120-137 (254)
347 TIGR00801 ncs2 uracil-xanthine 24.5 5.5E+02 0.012 23.5 9.4 40 93-133 23-63 (415)
348 cd02435 CCC1 CCC1. CCC1: This 23.2 4.4E+02 0.0096 22.0 10.1 21 119-139 191-211 (241)
349 COG2836 Uncharacterized conser 22.9 4.4E+02 0.0094 21.7 11.8 34 103-136 160-193 (232)
350 PHA02975 hypothetical protein; 22.3 1.7E+02 0.0037 18.6 3.3 17 11-27 41-57 (69)
351 CHL00031 psbT photosystem II p 22.0 1.4E+02 0.0031 15.8 3.8 9 32-40 21-29 (33)
352 PF02632 BioY: BioY family; I 21.4 3.7E+02 0.008 20.4 6.7 21 117-137 63-83 (148)
353 PF11511 RhodobacterPufX: Intr 21.3 2.1E+02 0.0045 18.2 3.5 26 11-36 29-54 (67)
354 KOG3097 Predicted membrane pro 21.0 6E+02 0.013 22.7 12.3 60 75-139 31-90 (390)
355 PHA03237 envelope glycoprotein 20.7 6.4E+02 0.014 23.1 7.8 10 207-216 289-298 (424)
356 PHA02650 hypothetical protein; 20.0 2E+02 0.0042 19.0 3.3 12 11-22 46-57 (81)
No 1
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.89 E-value=3.8e-22 Score=169.52 Aligned_cols=227 Identities=20% Similarity=0.294 Sum_probs=159.2
Q ss_pred ccccccCchhHHHHHHHHHHHHHHHHHHhcCC-CCCCCCCCCCCc--cccC--cccchh--hhhhHHHHhhhccchHHHH
Q 017535 5 TFMGIPGWRISFHIVGLISVVVGTLVRLFAND-PHFPDGGTANSD--QVSS--KSFRSD--VKVLIQEAKSVIKIPSFQI 77 (370)
Q Consensus 5 ~~~~~~gWr~~f~i~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~--~~~~--~~~~~~--~~~~~~~~~~~~~~~~~~~ 77 (370)
++..+++||..|++.++++++++++.++..|| |+...-++.++- +..+ ++..+. ......-.+.+++||..|.
T Consensus 177 ~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~ie~~~~d~~e~~~~~~~~~~ls~~~i~~~YVL~Nk~iW~ 256 (448)
T COG2271 177 FFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPPIEEYRGDPLEIYEEEKENEGLTAWQIFVKYVLKNKLIWL 256 (448)
T ss_pred HHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCHHHhhcCchhhhhhhccCCCccHHHHHHHHHHcChHHHH
Confidence 45566799999999999999999999999998 433221111110 0000 000000 1112223457999999888
Q ss_pred HHHHHhhhhhh-HHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh--hhCCCchhHHHHHHHHHH
Q 017535 78 IVAQGVTGSFP-WSALSFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLS--ARFPNSGRIILAQISSLS 153 (370)
Q Consensus 78 ~~~~~~~~~~~-~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~--~~~~~~~~~~~~~~~~~~ 153 (370)
+.+...+.+.. +++..|.|.|+ +..|+|...++...+.+-++++.|++++||++||+- ||.+ ..+.+.+
T Consensus 257 la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p-------~~~i~~~ 329 (448)
T COG2271 257 LALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGP-------MALIFML 329 (448)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccch-------HHHHHHH
Confidence 77777766666 88889999999 899999999999999999999999999999999975 4433 2222222
Q ss_pred HHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHH-hhchhhHHHHHH
Q 017535 154 AIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESI-LSSFAPPVVGIL 232 (370)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~g~l 232 (370)
.+.+....+...+. .+.++..++++.+|+....... ..-....|..|++..|++.|+...+.++ |.+.+....|++
T Consensus 330 ~i~~~~~~~w~~~~--~~~~l~~~~l~~iGf~IyGPqm-LiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i 406 (448)
T COG2271 330 LITASLVLYWLAPN--GSYLLDAILLFIIGFLIYGPQM-LIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYI 406 (448)
T ss_pred HHHHHHHHHHcCCC--ccHHHHHHHHHHHHHHHhhHHH-HHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceee
Confidence 22222233332222 2456677788888887654443 4556677999999999999999999999 778889999999
Q ss_pred HHhhcCCCCC
Q 017535 233 AQHVYGFKPI 242 (370)
Q Consensus 233 ~~~~~g~~~~ 242 (370)
.|.+ ||...
T Consensus 407 ~d~~-gW~g~ 415 (448)
T COG2271 407 ADTW-GWDGG 415 (448)
T ss_pred EecC-CCcch
Confidence 8885 65543
No 2
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.84 E-value=4.9e-19 Score=152.51 Aligned_cols=208 Identities=16% Similarity=0.242 Sum_probs=143.9
Q ss_pred CccccccccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccccCcccchhhhhhHHHHhhhccchHHHHHHHH
Q 017535 2 APMTFMGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQ 81 (370)
Q Consensus 2 ~g~~~~~~~gWr~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (370)
+|.++.+.+|||++|++.++++++..+..+..+| |+..+... ....++..+++|+|..+.....
T Consensus 156 LGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP-~~~~~~~~---------------~~~~~~~~~~l~~p~v~~~l~~ 219 (394)
T COG2814 156 LGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP-PSEISGSL---------------PGPLRTLLRLLRRPGVLLGLLA 219 (394)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC-CccCCCCC---------------CcchhHHHHHhcCchHHHHHHH
Confidence 3678899999999999999999999888888888 32222111 1122233468889996655544
Q ss_pred H-hhhhhhHHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHH
Q 017535 82 G-VTGSFPWSALSFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAA 159 (370)
Q Consensus 82 ~-~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (370)
. +.....|..++|+..++ +..|++....+++...++++.++|++++|+++|| +.|+. ......+.. ...
T Consensus 220 t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~-------l~~~~~l~a-~~~ 290 (394)
T COG2814 220 TFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRA-------LIAALLLLA-LAL 290 (394)
T ss_pred HHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhH-------HHHHHHHHH-HHH
Confidence 4 44444577778988888 7899999999999999999999999999999999 66544 122212221 222
Q ss_pred HHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhhcCC
Q 017535 160 LLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYGF 239 (370)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~~g~ 239 (370)
+.+...+. +.+...+..++.|+....... .......+ .-|+.+..+.+++....|+|.++|..++|.+.|+. ||
T Consensus 291 l~l~~~~~---~~~~~~~~~~~wg~a~~~~~~-~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~-g~ 364 (394)
T COG2814 291 LALTFTGA---SPALALALLFLWGFAFSPALQ-GLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDAL-GY 364 (394)
T ss_pred HHHHHhcc---hHHHHHHHHHHHHHHhhhhhh-HHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-ch
Confidence 22222222 233444455556665554333 33344444 33577999999999999999999999999999995 64
Q ss_pred C
Q 017535 240 K 240 (370)
Q Consensus 240 ~ 240 (370)
.
T Consensus 365 ~ 365 (394)
T COG2814 365 A 365 (394)
T ss_pred H
Confidence 4
No 3
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.82 E-value=6e-19 Score=160.87 Aligned_cols=228 Identities=16% Similarity=0.139 Sum_probs=138.8
Q ss_pred cccccccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCC--Cc-c-c-cCcc-cchhhhhhHHHH--hhhccchHH
Q 017535 4 MTFMGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTAN--SD-Q-V-SSKS-FRSDVKVLIQEA--KSVIKIPSF 75 (370)
Q Consensus 4 ~~~~~~~gWr~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~--~~-~-~-~~~~-~~~~~~~~~~~~--~~~~~~~~~ 75 (370)
+.+.+.+|||++|++.+++.++..++.++..++++.....+.+ +. + . ...+ ..........+. .+++++|.+
T Consensus 164 ~~l~~~~gwr~~f~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (455)
T TIGR00892 164 QYLFESFGWRGSFLILGGLLLHCCVCGALMRPVGPSQRVSKSKSKEGLPPDGSTKKLSKKSTAEKINRFLDFSLFTHRGF 243 (455)
T ss_pred HHHHHHhChHHHHHHHHHHHHHHHHHHHHhCCCCcccccccccccccCCCCCccccccccchhhhhhhhcchHHhcCchH
Confidence 4556778999999999988776655554444432211000000 00 0 0 0000 000000011111 247788887
Q ss_pred HHHHHHHhhhhhh-HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHH
Q 017535 76 QIIVAQGVTGSFP-WSALSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSA 154 (370)
Q Consensus 76 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~ 154 (370)
+..+...+..... +...+++|.|+++.|++..+++++.++.+++.+++++++|+++||...+.. +......+.++.
T Consensus 244 ~~~~~~~~l~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~---~~~~~~~~~~~~ 320 (455)
T TIGR00892 244 LVYLSGNVIMFLGFFAPIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPH---VQYLFSFALLFN 320 (455)
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHH---HHHHHHHHHHHH
Confidence 7665544433333 444578899997789999999999999999999999999999997321111 001111111111
Q ss_pred HHHHHHHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHH
Q 017535 155 IPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQ 234 (370)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~ 234 (370)
. + ..++.... .. .+.+.+..++.|++.+...+ ...+++.+.+|+++++++.|+++...++|+++||.+.|.+.+
T Consensus 321 ~-l-~~ll~~~~--~~-~~~~~i~~~~~G~~~g~~~~-~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~ 394 (455)
T TIGR00892 321 G-L-THLLCALA--GD-YTGLVIYCIFFGLSFGSVGA-LLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVD 394 (455)
T ss_pred H-H-HHHHHHHh--ch-HHHHHHHHHHHHHHhchHHH-HHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeeh
Confidence 1 1 11111111 12 33345556667777666666 667888899999999999999999999999999999999999
Q ss_pred hhcCCC
Q 017535 235 HVYGFK 240 (370)
Q Consensus 235 ~~~g~~ 240 (370)
..++|.
T Consensus 395 ~~g~~~ 400 (455)
T TIGR00892 395 ATKNYK 400 (455)
T ss_pred hcCCcc
Confidence 874544
No 4
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.82 E-value=2.1e-19 Score=154.42 Aligned_cols=236 Identities=36% Similarity=0.587 Sum_probs=161.0
Q ss_pred CccccccccC-chhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccccCcccchhhhhhHHHHhhhccchHHHH---
Q 017535 2 APMTFMGIPG-WRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQI--- 77 (370)
Q Consensus 2 ~g~~~~~~~g-Wr~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 77 (370)
.|..+....+ |||.|+..++++++++++.+++++||++...++.+...+..+ .....+++.+.+.|++.+..
T Consensus 176 vgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~~~~~~~~~~~----~~ts~~kDl~~l~~~~v~v~~sl 251 (493)
T KOG1330|consen 176 VGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPERGARDEVDGENKMVK----PFTSVWKDLKVLAKIKVFVLSSL 251 (493)
T ss_pred eeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCcccccccccccCCcCCC----CccchHHHHHHHHccCceeeehH
Confidence 3555666555 999999999999999999999999998753322221111111 11567778888877776433
Q ss_pred --HHHHHhhhhhhHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHH
Q 017535 78 --IVAQGVTGSFPWSALSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAI 155 (370)
Q Consensus 78 --~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~ 155 (370)
....+..+...|....+.+..++-.|.+..+..++..+..+++.+|.+++|.++||+.++..+..+.+.-.+.+.+..
T Consensus 252 ~~~a~~fv~Gs~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~ 331 (493)
T KOG1330|consen 252 GIIAAQFVIGSLSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGA 331 (493)
T ss_pred HHHHHHHhccccchhhhhHHHHHHHHhCCccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhh
Confidence 333334444444333444444455666776777777778889999999999999998886665455555555555554
Q ss_pred HHHHHHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhh-chhhHHHHHHHH
Q 017535 156 PLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILS-SFAPPVVGILAQ 234 (370)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~g~l~~ 234 (370)
+....++...+.....-....+.++++|....+...++..-+..+++|++.|.+++++...+..+.+ +-+|.+.|.+.|
T Consensus 332 ~~s~~~L~~~~~~~~~s~~~~~il~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd 411 (493)
T KOG1330|consen 332 PLSIPFLFLFPAFTSSSMIFGLILFLVGETISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGILSD 411 (493)
T ss_pred hHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcccccccceeeEecCcccccHHHHHHHHHHHHhccCCCcceehhHHH
Confidence 4444333333333333344566677778777777765778888899999999999999988887776 555669999999
Q ss_pred hhcCCCC
Q 017535 235 HVYGFKP 241 (370)
Q Consensus 235 ~~~g~~~ 241 (370)
+..||.+
T Consensus 412 ~l~g~~~ 418 (493)
T KOG1330|consen 412 KLRGYKP 418 (493)
T ss_pred HhhCCCc
Confidence 9988775
No 5
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.80 E-value=1.2e-17 Score=152.58 Aligned_cols=223 Identities=16% Similarity=0.209 Sum_probs=130.9
Q ss_pred ccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCC---ccccC--cccchhhhhhHHH-HhhhccchHHHHHHHHH
Q 017535 9 IPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANS---DQVSS--KSFRSDVKVLIQE-AKSVIKIPSFQIIVAQG 82 (370)
Q Consensus 9 ~~gWr~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~---~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 82 (370)
..|||+.|++.++++++..++.++++||+++....++++ .+... ....+......+. .+.++|++.++...+..
T Consensus 183 ~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 262 (452)
T PRK11273 183 FNDWHAALYMPAFAAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKHEQELTAKQIFMQYVLPNKLLWYIAIAN 262 (452)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCCCChhhhhhccccccccccCCCccHHHHHHHHHHcChHHHHHHHHH
Confidence 349999999999888887777777777743221100000 00000 0000000111111 12467888877655544
Q ss_pred hh-hhhhHHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHH
Q 017535 83 VT-GSFPWSALSFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAAL 160 (370)
Q Consensus 83 ~~-~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (370)
++ ....++...|+|.|+ +..|++..+++.+..+..++.+++.+++|+++||+++++... . ......+.. +...
T Consensus 263 ~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~---~-~~~~~~l~~-~~~~ 337 (452)
T PRK11273 263 VFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGA---T-GVFFMTLVT-IATI 337 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcch---H-HHHHHHHHH-HHHH
Confidence 43 334456668999999 568999999999888889999999999999999995433210 0 111111111 1111
Q ss_pred HHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhch-hhHHHHHHHHhhcCC
Q 017535 161 LLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSF-APPVVGILAQHVYGF 239 (370)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~g~l~~~~~g~ 239 (370)
.+...... . .+...+.++..|.......+ ....+..+.+|++.+|+++|+.++..++++.+ +|.+.|.+.|+. ||
T Consensus 338 ~~~~~~~~-~-~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~-g~ 413 (452)
T PRK11273 338 VYWLNPAG-N-PTVDMACMIVIGFLIYGPVM-LIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFF-GW 413 (452)
T ss_pred HHHHhccc-C-hHHHHHHHHHHHHHHHhHHH-HHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHh-cc
Confidence 11111111 1 22222334444443322111 22345678899999999999999999998765 799999999987 54
Q ss_pred C
Q 017535 240 K 240 (370)
Q Consensus 240 ~ 240 (370)
.
T Consensus 414 ~ 414 (452)
T PRK11273 414 D 414 (452)
T ss_pred h
Confidence 3
No 6
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.80 E-value=2.8e-17 Score=150.77 Aligned_cols=213 Identities=19% Similarity=0.190 Sum_probs=131.2
Q ss_pred CchhHHHHHHHHHHHHHHHHHHhcCC-CCCCCCCCCCC--ccc---cCcccchhhhhhHHH-HhhhccchHHHHHHHHHh
Q 017535 11 GWRISFHIVGLISVVVGTLVRLFAND-PHFPDGGTANS--DQV---SSKSFRSDVKVLIQE-AKSVIKIPSFQIIVAQGV 83 (370)
Q Consensus 11 gWr~~f~i~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~--~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 83 (370)
+||..|.+.++++++++++.+++.++ |++....+.++ .+. .+...........+. .+..+|+|.++...+..+
T Consensus 189 ~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 268 (467)
T PRK09556 189 HVIGMFIFPSIIALIIGFIGLRYGSDSPEELGWGKAEEIFGEPISEEDKETESTDMTKWQIFVEYVLKNPVIWLLCFANI 268 (467)
T ss_pred cchhHHHHHHHHHHHHHHHHHHhCCCChhhcCCCChhhcccCccchhhhccccccCcHHHHHHHHHHcChHHHHHHHHHH
Confidence 69999999999888887777777665 43221111100 000 000000000011111 224788998776555444
Q ss_pred hhh-hhHHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHH
Q 017535 84 TGS-FPWSALSFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALL 161 (370)
Q Consensus 84 ~~~-~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (370)
+.. ..++...|+|.|+ +.+|++..++++......++.+++.+++|+++||+++|+. .............+.
T Consensus 269 ~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~-------~~~~~~~~~~~~~~~ 341 (467)
T PRK09556 269 FLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRA-------LVACIALALIIFTLG 341 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCch-------HHHHHHHHHHHHHHH
Confidence 433 3455568999999 7799999999999988999999999999999999998865 121111111111111
Q ss_pred HHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHH-hhchhhHHHHHHHH
Q 017535 162 LLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESI-LSSFAPPVVGILAQ 234 (370)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~g~l~~ 234 (370)
.... ... ...+.+.++..|+....... .......+.+|++.+|++.|+.+.+.++ |++++|.+.|++.|
T Consensus 342 ~~~~--~~~-~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~ 411 (467)
T PRK09556 342 VYQH--ATS-EYMYLASLFALGFLVFGPQL-LIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIAD 411 (467)
T ss_pred HHHh--cCc-HHHHHHHHHHHHHHHhhHHH-HHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhc
Confidence 1111 112 22333445555543221111 1134566899999999999999999997 66999999999999
No 7
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.80 E-value=9e-18 Score=152.56 Aligned_cols=225 Identities=16% Similarity=0.141 Sum_probs=131.5
Q ss_pred cccccccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCC-CCC---CCccccCcccchhhhhhHHH-H-hhhccchHHHH
Q 017535 4 MTFMGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDG-GTA---NSDQVSSKSFRSDVKVLIQE-A-KSVIKIPSFQI 77 (370)
Q Consensus 4 ~~~~~~~gWr~~f~i~~~~~~i~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~ 77 (370)
+++.+.+|||+.|++.++++++..++..+.+||++.... ... +++........+..+...++ + +..++++.++.
T Consensus 168 ~~l~~~~gw~~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (434)
T PRK11663 168 GAIALHYGWRYGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWRHDALELAQQQEGAGLSRKEILTKYVLLNPYIWL 247 (434)
T ss_pred HHHHHcccHHHHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCcccccccccccchhccccCCChhhhHHHHHhcChHHHH
Confidence 455667899999999988877766655556666332110 000 00000000000000001111 1 13667888666
Q ss_pred HHHHHhhhhhh-HHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHH
Q 017535 78 IVAQGVTGSFP-WSALSFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAI 155 (370)
Q Consensus 78 ~~~~~~~~~~~-~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~ 155 (370)
+.......... +.+.+|+|.|+ +.+|++..+++...+...++++++.+++|+++||+.+++.. ... .........
T Consensus 248 ~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~--~~~-~~~~~~~~~ 324 (434)
T PRK11663 248 LSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRG--PMN-LIFAAGILL 324 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCcc--HHH-HHHHHHHHH
Confidence 55544443333 44557999999 77899999999999999999999999999999998543221 000 111111111
Q ss_pred HHHHHHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHh
Q 017535 156 PLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQH 235 (370)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~ 235 (370)
....+...+.. . ........+.+|++...... .......+..|++.+|++.|+.++..++|++++|.+.|++.|.
T Consensus 325 --~~~~~~~~~~~-~-~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~ 399 (434)
T PRK11663 325 --SVGSLWLMPFA-S-YVMQAACFFTIGFFVFGPQM-LIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEI 399 (434)
T ss_pred --HHHHHHHcccc-c-HHHHHHHHHHHHHHHhhHHH-HHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHh
Confidence 11111112222 2 22222333444443221111 1234557888889999999999999999999999999999998
Q ss_pred h
Q 017535 236 V 236 (370)
Q Consensus 236 ~ 236 (370)
.
T Consensus 400 ~ 400 (434)
T PRK11663 400 W 400 (434)
T ss_pred c
Confidence 7
No 8
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.79 E-value=2.9e-17 Score=149.80 Aligned_cols=209 Identities=13% Similarity=0.139 Sum_probs=135.3
Q ss_pred cccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccccCcccchhhhhhHHHHhhhccchHHHHHHHHHhhhhh
Q 017535 8 GIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGVTGSF 87 (370)
Q Consensus 8 ~~~gWr~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (370)
+..|||+.+++.+++++++.++.++..||+++..... + +.+ .+..+.++.+++||.++..+...++...
T Consensus 168 ~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~~~~~~~--~--~~~-------~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 236 (437)
T TIGR00792 168 DKFGWFMFALVLALIGVVSLIICFFGTKERYSEIPKN--I--EKK-------LSLKQIFKALFKNDQLLILCLAYLFYNL 236 (437)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHcCCEecCCCCCcc--c--ccC-------CCHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 3569999999999998888777777777643211100 0 000 1234556778899997766555554444
Q ss_pred hHHHH-HHHHHHHH-HhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhC
Q 017535 88 PWSAL-SFAAMWLE-LTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVL 165 (370)
Q Consensus 88 ~~~~~-~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (370)
.+... .+.+.|.+ .++ ++...+.+.....++.+++.++.++++||+++|+. ..++..+....... +...
T Consensus 237 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~-------~~~~~~~~~~~~~~-~~~~ 307 (437)
T TIGR00792 237 AFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKIL-------FAGGILLMVLGYLI-FFFA 307 (437)
T ss_pred HHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHH-------HHHHHHHHHHHHHH-HHHc
Confidence 43333 34444443 344 55667777777789999999999999999998865 23332222222112 2111
Q ss_pred CCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccC-------CCchhHHHHHHHHHHHHhhchhhHHHHHHHHhhcC
Q 017535 166 PDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVP-------EKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYG 238 (370)
Q Consensus 166 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~~g 238 (370)
+ ...+.+.+..++.|++.+...+ ..++++.|..+ ++.+|.+.|+.+++.+++..+++.+.|.+.+.. |
T Consensus 308 ~---~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~-G 382 (437)
T TIGR00792 308 G---SNLPLILVLIILAGFGQNFVTG-LVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGII-G 382 (437)
T ss_pred c---hhHHHHHHHHHHHHHHHHHHHH-HHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-C
Confidence 1 1123334444555666555555 56777777754 566899999999999999999999999999987 7
Q ss_pred CCC
Q 017535 239 FKP 241 (370)
Q Consensus 239 ~~~ 241 (370)
|..
T Consensus 383 ~~~ 385 (437)
T TIGR00792 383 YVA 385 (437)
T ss_pred CCc
Confidence 753
No 9
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.78 E-value=2.3e-17 Score=148.23 Aligned_cols=227 Identities=16% Similarity=0.176 Sum_probs=141.5
Q ss_pred cccccccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCC-CCCCccc---c---CcccchhhhhhHHHHhhhccchHHH
Q 017535 4 MTFMGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGG-TANSDQV---S---SKSFRSDVKVLIQEAKSVIKIPSFQ 76 (370)
Q Consensus 4 ~~~~~~~gWr~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (370)
+.+.+..+||+.|++.+++.++..++.++..+++++++.. .+++++. . +....+..+......++.+++|.++
T Consensus 139 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (399)
T TIGR00893 139 GWILIHFSWQWAFIIEGVLGIIWGVLWLKFIPDPPQKAKWLTEEEKYIVVGGLLAEQQGKGPSTPKKYQIKELLKDRRVW 218 (399)
T ss_pred HHHHHhCCchHHHHHHHHHHHHHHHHhhheecCCCCccccCCHHHHhhcchhhccccccccccCCCccchHHHhcCHHHH
Confidence 3455678999999999988888777776666664332211 1000000 0 0000000012233456788888866
Q ss_pred HHHHHHhhhhhh-HHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHH
Q 017535 77 IIVAQGVTGSFP-WSALSFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSA 154 (370)
Q Consensus 77 ~~~~~~~~~~~~-~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~ 154 (370)
......+..... .....+.|.|+ +.+|.++.+.+++.....++.+++.++.|+++||+++|+... ..........
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~~~ 295 (399)
T TIGR00893 219 GLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSL---VFARKTAIIA 295 (399)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccch---hHHHHHHHHH
Confidence 655544444444 44557899999 778999999999999999999999999999999999986311 0001111111
Q ss_pred HHHHHHHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHH
Q 017535 155 IPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQ 234 (370)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~ 234 (370)
.....+.......... .+.........+++.+ ..+ ...+++.+..|++.|+++.|+.+.+.++++.++|.+.|.+.|
T Consensus 296 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~ 372 (399)
T TIGR00893 296 GLVLSLLMFATNYVNI-PYAALALVALGFFGLG-AGA-IGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAA 372 (399)
T ss_pred HHHHHHHHHHhccchh-HHHHHHHHHHHHhchh-hhh-HHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhcc
Confidence 1111111111111111 2222222222222333 455 678899999999999999999999999999999999999998
Q ss_pred hh
Q 017535 235 HV 236 (370)
Q Consensus 235 ~~ 236 (370)
..
T Consensus 373 ~~ 374 (399)
T TIGR00893 373 TT 374 (399)
T ss_pred CC
Confidence 76
No 10
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.78 E-value=2.7e-17 Score=150.84 Aligned_cols=207 Identities=15% Similarity=0.147 Sum_probs=118.9
Q ss_pred ccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccccCcccchhhhhhHHHHhhhccchHHHHHHHHHhh-hhh
Q 017535 9 IPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGVT-GSF 87 (370)
Q Consensus 9 ~~gWr~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 87 (370)
..|||++|++.+++++++.++.+++.+++++... ++..++ .+ ... ....+.+++.++++.++.+.+.++. ...
T Consensus 194 ~~gWr~~f~i~g~l~l~~~l~~~~~~~~~p~~~~-~~~~~~-~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (476)
T PLN00028 194 FTAWRIAFFVPGLLHIIMGILVLTLGQDLPDGNY-RELKKS-GT-MPK---DSFSKVLRYGVTNYRTWILALTYGYSFGV 267 (476)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHcCcCCCCch-hhHHhc-Cc-ccc---ccHHHHHHHHHcCchhHHHHHHHHHHHHH
Confidence 3589999999999988877777666555322110 000000 00 000 1122345667788886554443333 333
Q ss_pred hHHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCC
Q 017535 88 PWSALSFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLP 166 (370)
Q Consensus 88 ~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (370)
.+...+++|.|+ +.+|++..+++.+.++..++.+++++++|+++||+++|+..+.+.....+...+... ....+...
T Consensus 268 ~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i--~~~~~~~~ 345 (476)
T PLN00028 268 ELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGV--FCIWLGRA 345 (476)
T ss_pred HHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHH--HHHHhccc
Confidence 345557889998 778999999999999999999999999999999999885432222222222222111 11111111
Q ss_pred CCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHH
Q 017535 167 DDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPV 228 (370)
Q Consensus 167 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 228 (370)
.. .....+.+++.+++.+...+ ..+++..+. .++.+|++.|+.+...++|+.++|.+
T Consensus 346 --~~-~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~-~~~~~g~~~g~~~~~g~lg~~i~~~l 402 (476)
T PLN00028 346 --NS-LGAAIVVMILFSIFVQAACG-ATFGIVPFV-SRRSLGVISGLTGAGGNVGAVLTQLL 402 (476)
T ss_pred --ch-HHHHHHHHHHHHHHHHHhhh-hhcccCccc-ChhhchhhhhhhhccccHHHHHHHHH
Confidence 11 22222333344444333333 445555564 45679999999866555555555443
No 11
>PRK03545 putative arabinose transporter; Provisional
Probab=99.78 E-value=4.8e-17 Score=145.94 Aligned_cols=202 Identities=15% Similarity=0.161 Sum_probs=134.3
Q ss_pred ccccccccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccccCcccchhhhhhHHHHhhhccchHHHHHH-HH
Q 017535 3 PMTFMGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIV-AQ 81 (370)
Q Consensus 3 g~~~~~~~gWr~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 81 (370)
++.+.+++|||++|++.++++++..++.++..|++++++ +...++.++++|+|.++... ..
T Consensus 153 ~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~ 214 (390)
T PRK03545 153 GRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLLPSEH------------------SGSLKSLPLLFRRPALVSLYLLT 214 (390)
T ss_pred HHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCCCCCC------------------cchHHHHHHHHhCcHHHHHHHHH
Confidence 345567789999999999888777666665555532110 01123345688888865433 33
Q ss_pred HhhhhhhHHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHH
Q 017535 82 GVTGSFPWSALSFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAAL 160 (370)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (370)
++.....+...++++.++ +..|++..+++.+.....++.+++.++.|++.||+++|.. ..+..+..... .
T Consensus 215 ~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~--------~~~~~~~~~~~-~ 285 (390)
T PRK03545 215 VVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFL--------LIAIALLLVCL-L 285 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHH--------HHHHHHHHHHH-H
Confidence 333333444557788888 6689999999999999999999999999999999876632 22222211111 1
Q ss_pred HHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 161 LLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
.+.... + ..+.+.+..++.|++.+...+ ...+.+.+..| +.++++.|+.+...++|..+||.+.|++.|..
T Consensus 286 ~l~~~~--~-~~~~~~~~~~l~g~~~~~~~~-~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~ 356 (390)
T PRK03545 286 LLLPAA--N-SEWHLSVLSIFWGIAIMCIGL-AMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHL 356 (390)
T ss_pred HHHHHh--c-hHHHHHHHHHHHHHHHhcchH-HHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 111111 1 133344455666666555444 44566667655 57899999999999999999999999999987
No 12
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.78 E-value=3.4e-17 Score=151.00 Aligned_cols=141 Identities=12% Similarity=0.162 Sum_probs=93.9
Q ss_pred hhhHHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHh
Q 017535 86 SFPWSALSFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLV 164 (370)
Q Consensus 86 ~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (370)
...+....|+|.|+ +.+|++..+.++......++.+++.++.|+++||+|||+. +.++.+.........+..
T Consensus 264 ~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~-------~~~~~~~~~~~~~~~~~~ 336 (490)
T PRK10642 264 VTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPF-------VILGSVALFVLAIPAFIL 336 (490)
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH-------HHHHHHHHHHHHHHHHHH
Confidence 34456668999999 6789998888887777888999999999999999999865 222222111111111111
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 165 LPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
.. ... ...+.+..++.+++.+.... ....++.+.+|++.|+++.|+.+.+..+++.++|.+.|++.+..
T Consensus 337 ~~-~~~-~~~~~~~~~~~g~~~~~~~g-~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~ 405 (490)
T PRK10642 337 IN-SNV-IGLIFAGLLMLAVILNCFTG-VMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVEST 405 (490)
T ss_pred Hh-CCC-HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 11 111 22233334444444333333 44666778899999999999866667778889999999998865
No 13
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.78 E-value=3e-18 Score=153.80 Aligned_cols=229 Identities=20% Similarity=0.205 Sum_probs=148.2
Q ss_pred ccccccc-cCchhHHHHHHHHHHHHHHHHHHhcCC-CCCCCCCCCCCccccCcccc--hhhhhhHHHHhhhccchHHHHH
Q 017535 3 PMTFMGI-PGWRISFHIVGLISVVVGTLVRLFAND-PHFPDGGTANSDQVSSKSFR--SDVKVLIQEAKSVIKIPSFQII 78 (370)
Q Consensus 3 g~~~~~~-~gWr~~f~i~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 78 (370)
++++.+. +||+++|++.|++++++.++++++..| |.+++...+++.+.-.+... ...+...-+++++++++.+|.+
T Consensus 184 sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~h~~is~~El~~I~~~k~~~~~~~~~~vP~~~i~ts~~vwai 263 (466)
T KOG2532|consen 184 SGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSKHPNISEKELKYIEKGKSEAHVKKKPPVPYKAILTSPPVWAI 263 (466)
T ss_pred HHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCHHHHHHHHhcccccccCCCCCCCHHHHHcCHHHHHH
Confidence 4566676 999999999999999999999888887 65544433222211000000 0001123357789999997776
Q ss_pred HHHH-hhhhhhHHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHH
Q 017535 79 VAQG-VTGSFPWSALSFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIP 156 (370)
Q Consensus 79 ~~~~-~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~ 156 (370)
+... +..+..+.+..|+|.|+ +.+|++..+.|++.++..+...+..+++|.++||+.+|.......+...-.......
T Consensus 264 ~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ 343 (466)
T KOG2532|consen 264 WISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGP 343 (466)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHH
Confidence 6554 44555566779999999 889999999999999999999999999999999998763333333444443333333
Q ss_pred HHHHHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHH
Q 017535 157 LAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQ 234 (370)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~ 234 (370)
..+++.+.+......+..+.++.+..++. |...+ -.+....+. .|++.+..+|+.+++..+.+.++|.+.|.+..
T Consensus 344 ai~l~~l~~~~~~~~~~a~~~l~~~~~~~-g~~~~-Gf~~~~~~~-apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~ 418 (466)
T KOG2532|consen 344 AVFLLVLAFTSDEHRLLAVILLTIAIGLS-GFNIS-GFYKNHQDI-APQHAGFVMGIINFVGALAGFIAPLLVGIIVT 418 (466)
T ss_pred HHHHHeeeecCCCcchHHHHHHHHHHHHc-ccchh-hhHhhhhhc-cchHHHHHHHHHHHHHHHHHHHHHHheeeEeC
Confidence 33333333333222222222222222221 11111 112222232 56779999999999999999999999998774
No 14
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.77 E-value=1.1e-16 Score=143.00 Aligned_cols=210 Identities=13% Similarity=0.111 Sum_probs=139.3
Q ss_pred ccccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccccCcccchhhhhhHHHHhhhccchHHHHHHHHHhhhh
Q 017535 7 MGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGVTGS 86 (370)
Q Consensus 7 ~~~~gWr~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (370)
.+..|||+.|++.++++++..++.++++++|++++..++.+. .......++.+++|.++......+...
T Consensus 150 ~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (377)
T TIGR00890 150 INLEGVPAAFIYMGIIFLLVIVLGAFLIGYPPGQLIKTNIEV-----------SVKDYTVWEMLRTPQFWVLYLSFFLNA 218 (377)
T ss_pred HhcccHHHHHHHHHHHHHHHHHHHHHheecCchhccccCccc-----------chhhhhHHHHHcCccHHHHHHHHHHHh
Confidence 456799999999999988888777777776543221111000 011123446778888665544433333
Q ss_pred hh-HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhC
Q 017535 87 FP-WSALSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVL 165 (370)
Q Consensus 87 ~~-~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (370)
.. .....+.+.|.+++|.+..+.+.+.+...++.++++++.|++.||++||+. ..++..+....... +...
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~-------~~~~~~~~~~~~~~-~~~~ 290 (377)
T TIGR00890 219 VSGLLLIGLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKT-------MSIVFGISAVGMAA-MLFI 290 (377)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh-------hhHHHHHHHHHHHH-HHHc
Confidence 33 333355666777789999999999999999999999999999999998875 23332222222211 1111
Q ss_pred CCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhhcCC
Q 017535 166 PDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYGF 239 (370)
Q Consensus 166 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~~g~ 239 (370)
+ ... ...+....++.+++.+...+ ...+++.+.+|+++++++.|+.+....+|+.++|.+.|.+.+.. ||
T Consensus 291 ~-~~~-~~~~~~~~~~~g~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~-g~ 360 (377)
T TIGR00890 291 P-MLN-DVLFLATVALVFFTWGGTIS-LFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEI-GF 360 (377)
T ss_pred c-cch-hHHHHHHHHHHHHHhccchh-ccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhh-ch
Confidence 2 111 22223334455665555555 56778889999999999999999999999999999999999876 53
No 15
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.77 E-value=5.4e-17 Score=144.99 Aligned_cols=228 Identities=18% Similarity=0.241 Sum_probs=140.7
Q ss_pred ccccccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCC-CCc--cc---cCcccchhhhhhHHHHhhhccchHHHHH
Q 017535 5 TFMGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTA-NSD--QV---SSKSFRSDVKVLIQEAKSVIKIPSFQII 78 (370)
Q Consensus 5 ~~~~~~gWr~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (370)
.+....+||+.|++.+++.++..++.+++.|++++.+...+ ++. +. ......+.........+.++++|.++.+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (379)
T TIGR00881 142 GIAELYSWHWVFIVPGIIAIIVSLICFLLLRDSPQSCGLPPAEEMPNEEPDGDAEKKEEELTKKQIFLQYVLLNKVLWYI 221 (379)
T ss_pred HHHhcCCchhHHHHHHHHHHHHHHHHheeeCCCccccccCccccCcccccccccccccccccchHHHHHHHHhcchHHHH
Confidence 34456799999999998888777777777676432211110 000 00 0000000001122234567888886665
Q ss_pred HHHHhhhh-hhHHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHH
Q 017535 79 VAQGVTGS-FPWSALSFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIP 156 (370)
Q Consensus 79 ~~~~~~~~-~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~ 156 (370)
....+... .......+.|.|+ +.+|+++.+.+.+.....++.+++.++.|++.||..+++.. ..........
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~------~~~~~~~~~~ 295 (379)
T TIGR00881 222 SLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRG------PLAVFFMALI 295 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcch------HHHHHHHHHH
Confidence 44443333 3345557899999 77899999999999999999999999999999997554431 1111111111
Q ss_pred HHHHHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 157 LAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
...+........ .......+..+..|+......+ ....+..+..|++.||++.|+.+.+.++++.++|.+.|.+.|..
T Consensus 296 ~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 373 (379)
T TIGR00881 296 IVSLLVYWLNPA-ANPLMDLICLFALGFLVYGPQM-LIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGF 373 (379)
T ss_pred HHHHHHHhcCcc-hhHHHHHHHHHHHHHHHhhhhH-HHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhh
Confidence 111111111111 1122333444555554433333 44567788999999999999999999999999999999999987
Q ss_pred cCCCC
Q 017535 237 YGFKP 241 (370)
Q Consensus 237 ~g~~~ 241 (370)
||..
T Consensus 374 -g~~~ 377 (379)
T TIGR00881 374 -GWAG 377 (379)
T ss_pred -cccc
Confidence 6553
No 16
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.77 E-value=5.5e-17 Score=146.89 Aligned_cols=209 Identities=12% Similarity=0.120 Sum_probs=135.3
Q ss_pred ccccccccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccccCcccchhhhhhHHHHhhhccchHHHHHHHHH
Q 017535 3 PMTFMGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQG 82 (370)
Q Consensus 3 g~~~~~~~gWr~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (370)
++.+.+..|||+.|++.++..++..++. +.+|+++.++..+ +. . .++..+.++.++++|.++...+..
T Consensus 166 ~g~l~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~----~~----~---~~~~~~~~~~~~~~~~~~~~~~~~ 233 (417)
T PRK10489 166 GGLLIAAGGVAWNYGLAAAGTFITLLPL-LRLPALPPPPQPR----EH----P---LRSLLAGFRFLLASPVVGGIALLG 233 (417)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHH-HhCCCCCCCCccc----cc----c---hHHHHHHHHHHHcChHHHHHHHHH
Confidence 4455667799999998877766554443 4445422111000 00 0 123344556678888865544433
Q ss_pred hhhhhhHHHHHHHHHHHH-HhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHH
Q 017535 83 VTGSFPWSALSFAAMWLE-LTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALL 161 (370)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (370)
++.........+.|.|++ .+|+++...+++.+...++.+++.++.+++.||.++++. ...+.++.. +..+.
T Consensus 234 ~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~-------l~~~~~~~~-~~~~~ 305 (417)
T PRK10489 234 GLLTMASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLL-------MLLSTLGSF-LAVGL 305 (417)
T ss_pred HHHHHHHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchH-------HHHHHHHHH-HHHHH
Confidence 333333444578899994 499999999999999999999999999999988544332 222222221 11111
Q ss_pred HHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 162 LLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
+ ... + .++...+..++.|++.+...+ ...+++.+..|++.||+++|+.+...++|..+||.+.|++.+..
T Consensus 306 ~-~~~--~-~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~ 375 (417)
T PRK10489 306 F-GLM--P-MWILAVLCLALFGYLSAISSL-LQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMM 375 (417)
T ss_pred H-Hcc--c-hHHHHHHHHHHHHHHHHHHHH-HHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHh
Confidence 1 111 2 233344555666666665555 55678889999999999999999999999999999999999987
No 17
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.77 E-value=8.1e-17 Score=142.35 Aligned_cols=206 Identities=12% Similarity=-0.029 Sum_probs=129.5
Q ss_pred ccccccccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccccCcccchhhhhhHHHHhhhccchHHHHHHHHH
Q 017535 3 PMTFMGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQG 82 (370)
Q Consensus 3 g~~~~~~~gWr~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (370)
+..+.+++|||+.|++.++++++..++.++.+||+++.+.+. . .. ++..+++++++|+|.++.+....
T Consensus 134 ~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~~lp~~p~~~~~~--~---~~-------~~~~~~~~~ll~~~~~~~~~~~~ 201 (368)
T TIGR00903 134 GLKIYTAGGLQLLIIPIAAVAAAGIILVLAALPALPFQAAEG--F---GF-------KDAVKEFGALAGRKDLWIIGAIL 201 (368)
T ss_pred HHHHHHccchHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCC--c---ch-------HHHHHHHHHHHcChhHHHHHHHH
Confidence 455667889999999999998888887877888743221110 0 00 11223567899999976655544
Q ss_pred -hhhhhhHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHH
Q 017535 83 -VTGSFPWSALSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALL 161 (370)
Q Consensus 83 -~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (370)
+.....+++.+|+|.|+++.|++.. .+.......+.+.++ .++++||..||+.+..... ....+.. .....
T Consensus 202 ~~~~~~~~~~~~wlp~~L~~~g~s~~-~~~~~~l~~~~g~~g---~~~~~d~~~r~~~r~~~~~---~~~~~~a-~~~~~ 273 (368)
T TIGR00903 202 GFGVALFDNLAIWLEAALRPAGLEDI-AGDAVALAILAGLIG---VAVIPDRVARAGLRSIYIR---AAALLIA-AFFLA 273 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCChH-HHHHHHHHHHHHHHH---HHHhhHHhhhhhhHHHHHH---HHHHHHH-HHHHH
Confidence 4444456777999999977788865 555555555544444 5889999876643211111 1111111 11111
Q ss_pred HHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHH
Q 017535 162 LLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILA 233 (370)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~ 233 (370)
+ ...... . .......+.+++.....+ ..+++.+|.+|++.||++.|+.+..+++++..+|.+.+.+.
T Consensus 274 ~-~~~~~~--~-~~~~~~~l~~~~~~~~~~-~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~ 340 (368)
T TIGR00903 274 L-AFELNR--L-ALFAFIGIAGLLMLPAYA-IIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFI 340 (368)
T ss_pred H-HHcccc--H-HHHHHHHHHHHhhhhhHH-HHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHh
Confidence 1 111111 1 222333444454444444 56788899999999999999999999999999999988777
No 18
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.76 E-value=1.5e-15 Score=133.92 Aligned_cols=212 Identities=14% Similarity=0.125 Sum_probs=154.3
Q ss_pred ccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccccCcccchhhhhhHHHHhhhccchHHHHHHHHHhhhhhh
Q 017535 9 IPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGVTGSFP 88 (370)
Q Consensus 9 ~~gWr~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (370)
..||+...++.++++++..+++++..+|+..+....++. .+ .+..+.+..+++||.+...++..++....
T Consensus 182 ~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~~~~---~~-------~~~~~~~~~~~~Nrp~~~~l~~~l~~~~~ 251 (467)
T COG2211 182 ALGYQGTALVLGVIGVILLLFCFFNVKERVVETQPTKTG---VK-------LKLKDSFLLIFKNRPLLLLLLMNLLLFIA 251 (467)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhhcccCccccCccc---cc-------ccHHHHHHHHHccchHHHHHHHHHHHHHH
Confidence 569999999999999999999999888854322211110 00 33445566789999988888877777776
Q ss_pred HHHH-HHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCC
Q 017535 89 WSAL-SFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLP 166 (370)
Q Consensus 89 ~~~~-~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (370)
+.+. +....|. ..+|.+.............+.+++.++..++.+|+|+|+. ..++.++.++.....+ ..+
T Consensus 252 ~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~-------~~~~~~~~~i~~~~~~-f~~ 323 (467)
T COG2211 252 FNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKL-------FLIGLLLLAVGYLLLY-FTP 323 (467)
T ss_pred HHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHH-------HHHHHHHHHHHHHHHH-hhc
Confidence 5555 4445555 4678888888887777888888889999999999999986 4444444433333333 233
Q ss_pred CCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccC-------CCchhHHHHHHHHHHHHhhchhhHHHHHHHHhhcCC
Q 017535 167 DDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVP-------EKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYGF 239 (370)
Q Consensus 167 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~~g~ 239 (370)
....+.+.+..++.+++.+...+ ..+++++|..+ .+..|..+|.+.++..+|.+++..+.|++++.. ||
T Consensus 324 --~~~~~l~~~~~~i~~~g~~~~~~-l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~-Gy 399 (467)
T COG2211 324 --AGSVVLIVVALIIAGVGTGIANP-LPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAI-GY 399 (467)
T ss_pred --CcchHHHHHHHHHHHHHhhcccc-ccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHc-CC
Confidence 22244455555666777777777 88999999765 566899999999999999999999999999998 88
Q ss_pred CCC
Q 017535 240 KPI 242 (370)
Q Consensus 240 ~~~ 242 (370)
.+.
T Consensus 400 v~~ 402 (467)
T COG2211 400 VPN 402 (467)
T ss_pred CCC
Confidence 865
No 19
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.76 E-value=2.2e-17 Score=151.62 Aligned_cols=226 Identities=14% Similarity=0.033 Sum_probs=135.7
Q ss_pred cccccc-cCchhHHHHHHHHHHHHHHHHHHhcCC-CCCCCCCCCCCccc---c-CcccchhhhhhHHHHhhhccchHHHH
Q 017535 4 MTFMGI-PGWRISFHIVGLISVVVGTLVRLFAND-PHFPDGGTANSDQV---S-SKSFRSDVKVLIQEAKSVIKIPSFQI 77 (370)
Q Consensus 4 ~~~~~~-~gWr~~f~i~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (370)
+.+.+. .|||++|++.++++++..++++++.+| |+.++...+++.+. . +.+..+ ......++++++++.++.
T Consensus 188 ~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 265 (465)
T TIGR00894 188 GWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIHPCISKFEKKYINSSLQGQKGS--TRQSLPIKAIPKSLPVWA 265 (465)
T ss_pred HHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcccCCCCCHHHHHHHHhhcccccCC--CCCCCCHHHHhcCHHHHH
Confidence 345556 499999999999988887777777666 43222211111000 0 000000 011123567888988666
Q ss_pred HHHHHhh-hhhhHHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHH-HHHHHHHHH
Q 017535 78 IVAQGVT-GSFPWSALSFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRII-LAQISSLSA 154 (370)
Q Consensus 78 ~~~~~~~-~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~-~~~~~~~~~ 154 (370)
.....+. ....+.+.+|+|.|+ +.+|++..+.+++.++..++.+++.+++|+++||+++|+....... .........
T Consensus 266 ~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~ 345 (465)
T TIGR00894 266 IWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGL 345 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHH
Confidence 5554444 444456668999999 7799999999999999999999999999999999987755322211 111111111
Q ss_pred HHHHHHHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHH
Q 017535 155 IPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQ 234 (370)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~ 234 (370)
............... .....+.+.+.+.+.+...+ .......+..| +.+|.+.|+.++.+++++.++|.+.|.+.+
T Consensus 346 ~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~-~~~g~~~g~~~~~~~l~~~i~p~l~g~~~~ 421 (465)
T TIGR00894 346 GPGIFAYALPYLSAA--FYLTIIILTLANAVSSGPLA-GVLINSLDLAP-RFLGFIKGITGLPGFIGGLIASTLAGNILS 421 (465)
T ss_pred HHHHHHHHHHHcCCc--hHHHHHHHHHHHHHhhhhhh-hhhhchhhcCh-hHHHHHHHHHHHHHHHHHHHHHHhhheeeC
Confidence 111111111111111 12222223333333333333 33445556555 479999999999999999999999998876
Q ss_pred h
Q 017535 235 H 235 (370)
Q Consensus 235 ~ 235 (370)
.
T Consensus 422 ~ 422 (465)
T TIGR00894 422 Q 422 (465)
T ss_pred C
Confidence 5
No 20
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.76 E-value=2.2e-16 Score=142.45 Aligned_cols=211 Identities=13% Similarity=0.012 Sum_probs=135.5
Q ss_pred cccccccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccccCcccchhhhhhHHHHhhhccchHHHHHHHHHh
Q 017535 4 MTFMGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGV 83 (370)
Q Consensus 4 ~~~~~~~gWr~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (370)
+.+.++.|||++|++.+++.++..+..++..||+++....+ .+ .++..++++.++++|.++.......
T Consensus 158 ~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-------~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (406)
T PRK15402 158 AALIHVLPWRGMFVLFAALAALSFFGLWRAMPETAGRVGEK-----LS-------LKELGRDYKLVLKNRRFVAGALALG 225 (406)
T ss_pred HHHHHccCccHHHHHHHHHHHHHHHHHHHhCCCCCcccccc-----cc-------HHHHHHHHHHHHcCcHHHHHHHHHH
Confidence 44556789999999988888776665555555532211100 00 0334556678899998766554443
Q ss_pred hhhhh-HHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHH
Q 017535 84 TGSFP-WSALSFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALL 161 (370)
Q Consensus 84 ~~~~~-~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (370)
+.... +...++.|.++ +.+|+++.+.+.......++.+++.++.|+++||+++|+. ..++..+........
T Consensus 226 ~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~-------~~~~~~~~~~g~~~~ 298 (406)
T PRK15402 226 LVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSL-------IRMGLWPMVAGLLLA 298 (406)
T ss_pred HHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHH-------HHHHHHHHHHHHHHH
Confidence 33332 33345678888 7799999999988887888899999999999999988864 222222221111111
Q ss_pred -HHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 162 -LLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 162 -~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
+....... ..+.+.+..++.|++.+...+ ........ .+++++|++.+++++...++..+|+.+.+++.+..
T Consensus 299 ~~~~~~~~~-~~~~~~~~~~~~g~g~~~~~~-~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~ 371 (406)
T PRK15402 299 ALATVISSH-AYLWLTAGLSLYAFGIGLANA-GLYRLTLF-SSDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGG 371 (406)
T ss_pred HHHHHcccc-cHHHHHHHHHHHHHHHHHHhh-hHHHHHhh-hccccccHHHHHHHHHHHHHHHHHHHHHHhcccCC
Confidence 11111111 233344555666666665555 44444443 34578999999999999999999999999987765
No 21
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.75 E-value=9.9e-17 Score=144.79 Aligned_cols=210 Identities=16% Similarity=0.140 Sum_probs=131.7
Q ss_pred ccccccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccccCcccchhhhhhHHHHhhhccchHHHHH-HHHHh
Q 017535 5 TFMGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQII-VAQGV 83 (370)
Q Consensus 5 ~~~~~~gWr~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 83 (370)
.+.+..+||+.|++.+++.++..++..+++||+++....+.+.+ .+ +...+...+..+.+..+.. ...++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~-------~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (406)
T PRK11551 161 LAAGDAAWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAGK--QR-------APVLRALFGEGRATATLLLWISYFF 231 (406)
T ss_pred HHccccCHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCcch--hh-------hhhHHHHhhhhhhhHHHHHHHHHHH
Confidence 44567899999999887777666666666677432211110000 00 1111111111112222222 22222
Q ss_pred hhhhhHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHH
Q 017535 84 TGSFPWSALSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLL 163 (370)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (370)
.....+....|.|.|+++.|+++.+.+.+.....++.+++.++.|++.||+++|+. .....+... .....+.
T Consensus 232 ~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~-------~~~~~~~~~-~~~~~~~ 303 (406)
T PRK11551 232 TLIVLYFLLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRV-------VLLIYAGIL-ASLAALA 303 (406)
T ss_pred HHHHHHHHHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHH-------HHHHHHHHH-HHHHHHH
Confidence 22333455578899997789999999999999999999999999999999998865 222211111 1111111
Q ss_pred hCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 164 VLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
.. +. .+.+.+..++.|++.+...+ ...++..+.+|++.|+++.|+.+.+..+++.++|.+.|.+.+..
T Consensus 304 -~~--~~-~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~ 371 (406)
T PRK11551 304 -AA--PS-FAGMLLAGFAAGLFVVGGQS-VLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALG 371 (406)
T ss_pred -hc--Cc-HHHHHHHHHHHHHHHHhHHH-HHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccC
Confidence 11 12 22333444555665544445 56788889999999999999999999999999999999999875
No 22
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.75 E-value=9e-17 Score=146.25 Aligned_cols=221 Identities=15% Similarity=0.217 Sum_probs=130.4
Q ss_pred cccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCC-CCCC--Cccc-cC-cccchhhhhhHHH-HhhhccchHHHHHHHH
Q 017535 8 GIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDG-GTAN--SDQV-SS-KSFRSDVKVLIQE-AKSVIKIPSFQIIVAQ 81 (370)
Q Consensus 8 ~~~gWr~~f~i~~~~~~i~~~~~~~~~~~~~~~~~-~~~~--~~~~-~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 81 (370)
...|||+.|++.++++++..++.++++||+++... .+.+ +.+. .. ....+...+..+. .+.++|++.++.....
T Consensus 180 ~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (438)
T TIGR00712 180 WFNDWHAALYFPAICAIIVALFAFAMMRDTPQSCGLPPIEEYRNDYPDDYNEKAEQELTAKEIFMQYVLPNKLLWYIAIA 259 (438)
T ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHhccCCHHhcCCCCchhcccccccccccccccccchHHHHHHHHccCchHHHHHHH
Confidence 35699999999999888877777777777432211 0000 0000 00 0000000001111 1247788887766544
Q ss_pred Hhhh-hhhHHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHH-HH-H
Q 017535 82 GVTG-SFPWSALSFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSA-IP-L 157 (370)
Q Consensus 82 ~~~~-~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~-~~-~ 157 (370)
..+. ...++..+|+|.|+ +..|+++.+++++..+..++++++.+++|+++||+++++.. ..+.... .. .
T Consensus 260 ~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~-------~~~~~~~~~~~~ 332 (438)
T TIGR00712 260 NVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRG-------ATGVFFMTLVTI 332 (438)
T ss_pred HHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCccc-------HHHHHHHHHHHH
Confidence 4333 33356668999999 56899999999999999999999999999999999765431 1111111 11 1
Q ss_pred HHHHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhh-chhhHHHHHHHHhh
Q 017535 158 AALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILS-SFAPPVVGILAQHV 236 (370)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~g~l~~~~ 236 (370)
....+...+. .. .+......+..|++...... .......+.+|++.+|+++|+.+...++++ +++|.+.|.+.|..
T Consensus 333 ~~~~~~~~~~-~~-~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~ 409 (438)
T TIGR00712 333 AVIVYWMNPA-GN-PLVDMICMIVIGFLIYGPVM-LIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFF 409 (438)
T ss_pred HHHHHHhcCC-Cc-hHHHHHHHHHHHHHHccHHH-HHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhc
Confidence 1111111111 11 22222333444443221111 112345688899999999999999988875 68999999999987
Q ss_pred cCC
Q 017535 237 YGF 239 (370)
Q Consensus 237 ~g~ 239 (370)
||
T Consensus 410 -g~ 411 (438)
T TIGR00712 410 -GW 411 (438)
T ss_pred -cc
Confidence 53
No 23
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.75 E-value=5e-16 Score=142.55 Aligned_cols=213 Identities=13% Similarity=0.112 Sum_probs=131.5
Q ss_pred cCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccccCcccchhhhhhHHHHhhhccchHHHHHHHHHhhhhhhH
Q 017535 10 PGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGVTGSFPW 89 (370)
Q Consensus 10 ~gWr~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (370)
.||++...+.+++.++..++.++..||+........++ +++ ....+.++.+++||.++.++...+......
T Consensus 177 ~g~~~~~~i~~~~~~~~~~~~~~~~~e~~~~~~~~~~~--~~~-------~~~~~~~~~~~~n~~~~~ll~~~~~~~~~~ 247 (473)
T PRK10429 177 FGFQMFTLVLIAFFIVSTIITLRNVHEVYSSDNQVSAE--GSH-------LTLKDIVALIYKNDQLSCLLGMALAYNIAS 247 (473)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHcCceecCCcccccccc--ccC-------CCHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 46888888888877776666666566632111100000 000 223445566789998777666555544444
Q ss_pred HHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHH-hCCC
Q 017535 90 SAL-SFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLL-VLPD 167 (370)
Q Consensus 90 ~~~-~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 167 (370)
... .+.+.|.+....+....+.+.....++.+++.++.++++||+|+|+. ..++..+.++.....+. ....
T Consensus 248 ~~~~~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~-------~~~~~~~~~~~~~~~~~~~~~~ 320 (473)
T PRK10429 248 NIINGFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRIL-------WAGASIFPVLSCGVLLLMGLAA 320 (473)
T ss_pred HHHhhheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHH-------HHHHHHHHHHHHHHHHHHhccC
Confidence 443 34443445544466667777776678889999999999999999975 23332222211111111 1111
Q ss_pred CCChhHHHHHHHHHHHHHHHhcCCCCccchhccccC-------CCchhHHHHHHHHHHHHhhchhhHHHHHHHHhhcCCC
Q 017535 168 DPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVP-------EKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYGFK 240 (370)
Q Consensus 168 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~~g~~ 240 (370)
+...+.+.+..++.|++.+...+ ..++++.|..+ .+..|..+|..+++..++.++++.+.|++.+.. ||+
T Consensus 321 -~~~~~~~~i~~~l~g~~~~~~~~-~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~-Gy~ 397 (473)
T PRK10429 321 -PHNALLIVIAGILLNIGTALFWV-LQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLI-GYV 397 (473)
T ss_pred -chhHHHHHHHHHHHHHHHHHHHH-HHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCC
Confidence 12233344444555555555555 56788888855 556788999999999999999999999999988 776
Q ss_pred C
Q 017535 241 P 241 (370)
Q Consensus 241 ~ 241 (370)
.
T Consensus 398 ~ 398 (473)
T PRK10429 398 P 398 (473)
T ss_pred C
Confidence 4
No 24
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.75 E-value=3.7e-16 Score=143.67 Aligned_cols=212 Identities=14% Similarity=0.168 Sum_probs=129.6
Q ss_pred cccc-ccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccccCcccchhhhhhHHHHhhhccchHHHHH-HHHH
Q 017535 5 TFMG-IPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQII-VAQG 82 (370)
Q Consensus 5 ~~~~-~~gWr~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 82 (370)
++.+ ..|||.+|++.+++.++..+..+ +.|||++....+ +. .. +...++++++++++..+.. ....
T Consensus 165 ~l~~~~~GWr~~f~i~a~l~ll~~l~~~-~~~e~~~~~~~~--~~--~~-------~~~~~~l~~~~~~~~~~~~ll~~~ 232 (491)
T PRK11010 165 WLADRYLGWQGMYWLMAALLIPCIIATL-LAPEPTDTIPVP--KT--LE-------QAVVAPLRDFFGRNNAWLILLLIV 232 (491)
T ss_pred HHHhcccCHHHHHHHHHHHHHHHHHHHH-hcCCCccccccc--cc--hh-------hhHHHHHHHHHcCcCHHHHHHHHH
Confidence 4445 46999999999988776655444 457754321100 00 00 1123345567766664433 3333
Q ss_pred hhhhhhHHHHHHHHHHH-HHhCCCHHHHHHHHH-HHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHH-HHH
Q 017535 83 VTGSFPWSALSFAAMWL-ELTGFSHEKTAFLMA-LFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIP-LAA 159 (370)
Q Consensus 83 ~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~-~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~-~~~ 159 (370)
++....+....+.+.|+ +.+|++..+.+.+.. ...++.++|.+++|+++||+++|+. ..++.++... ...
T Consensus 233 l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~-------l~i~~~l~~l~~l~ 305 (491)
T PRK11010 233 LYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRA-------LMIFGILQGVSNAG 305 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH-------HHHHHHHHHHHHHH
Confidence 33333334446778887 779999999999875 5567999999999999999998764 2222221111 111
Q ss_pred HHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhhcCC
Q 017535 160 LLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYGF 239 (370)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~~g~ 239 (370)
....... ... .+.+....++..+..+...+ ...++..+..+++..++..|+.+....+|..+++.+.|++.|.. ||
T Consensus 306 ~~~l~~~-~~~-~~~l~~~~~l~~~~~g~~~~-~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~-G~ 381 (491)
T PRK11010 306 YWLLSIT-DKN-LYSMGAAVFFENLCGGMGTA-AFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAH-GW 381 (491)
T ss_pred HHHHHhc-ccc-HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-Ch
Confidence 1111111 122 22222233332222232233 44677788899999999999999999999999999999999987 53
No 25
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.75 E-value=8.5e-16 Score=138.34 Aligned_cols=213 Identities=12% Similarity=0.081 Sum_probs=129.8
Q ss_pred cccccccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccccCcccchhhhhhHHHHhhhccchHHHHHHHHH-
Q 017535 4 MTFMGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQG- 82 (370)
Q Consensus 4 ~~~~~~~gWr~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 82 (370)
+++.+.+||+..++......++..++.+++.+++++++..+ + +. .. .+..+.++.++|+|.++......
T Consensus 163 ~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~----~~---~~~~~~~~~~~~~~~~~~~~~~~~ 232 (402)
T TIGR00897 163 SYAIPAFGEMNTLWSALAFVLTGGVIALFSNKDIFTPQHMQ--T-RE----KF---SELGKAATILFTNPNVLLGGMVRI 232 (402)
T ss_pred HhcccccchHHHHHHHHHHHHHHHHHHHhccCCCCCccccc--C-Cc----ch---hhHHHHHHHHHcChhHHHHHHHHH
Confidence 45566788776666554443433444444445432211110 0 00 00 22334566788999876554433
Q ss_pred hhhhhhHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHH-HHHHH
Q 017535 83 VTGSFPWSALSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIP-LAALL 161 (370)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 161 (370)
+.....++..+|.|.|++++|++..+.+.+.+...+++.++.++.|+++||+++|+.. .......... ...+.
T Consensus 233 ~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~------~~~~~l~~~~~~~~l~ 306 (402)
T TIGR00897 233 INTIGLFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTV------RWFGGVGCGIFTLALY 306 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHH------HHHHHHHHHHHHHHHH
Confidence 3333445666899988877999999999988888999999999999999999987651 1111111111 11111
Q ss_pred HHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 162 LLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
+..... ....+...+..++.|++.+...+ . .+...+. ++++||++.|+.+...++++.++|.+.|.+.+..
T Consensus 307 ~~~~~~-~~~~~~~~~~~~~~G~~~~~~~~-~-~~~~~~~-~~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~ 377 (402)
T TIGR00897 307 YIPQHF-GHSFAVALIIAIALGIFLAGYVP-L-AAVFPTL-APKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFF 377 (402)
T ss_pred HHHHcc-CCcHHHHHHHHHHHHHHHHHHHH-H-HHHHHhh-CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 111111 11233334445556665554433 2 3445554 5568999999999999999999999999999986
No 26
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.75 E-value=1.7e-16 Score=144.23 Aligned_cols=161 Identities=14% Similarity=0.133 Sum_probs=104.5
Q ss_pred HHhhhccchHHHHHHHHHhhhh----hhHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCC
Q 017535 65 EAKSVIKIPSFQIIVAQGVTGS----FPWSALSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPN 140 (370)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~ 140 (370)
.++.+++++.++.....+.... ..+....++|.|++..|+++.+.+.+.+...++.+++.++.|++.||+++|+.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~- 298 (426)
T PRK12307 220 SMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKT- 298 (426)
T ss_pred HHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH-
Confidence 4567788877544332222111 22234568899997789999999999888899999999999999999998864
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHH
Q 017535 141 SGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESI 220 (370)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 220 (370)
...+..+....... +...+. .. ...+....+..++......+ ....++.+.+|++.+|++.|+.+.+..+
T Consensus 299 ------~~~~~~~~~~~~~~-~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~g~~~g~~~~~~~~ 368 (426)
T PRK12307 299 ------FSIGLLMSFLFIFP-LFRIPQ-DN-YLLLGACLFGLMATNVGVGG-LVPKFLYDYFPLEVRGLGTGLIYNLAAT 368 (426)
T ss_pred ------HHHHHHHHHHHHHH-HHHHcc-cc-HHHHHHHHHHHHHhcccHhH-HHHHHHHHhCcHHHHhhhhhHHHHHHhH
Confidence 22222222221111 111121 11 12122222222222111122 3456778999999999999999999999
Q ss_pred hhchhhHHHHHHHHhh
Q 017535 221 LSSFAPPVVGILAQHV 236 (370)
Q Consensus 221 ~~~~~~~~~g~l~~~~ 236 (370)
++.++|.+.|++.+..
T Consensus 369 ~~~~gp~~~g~l~~~~ 384 (426)
T PRK12307 369 SGTFNSMAATWLGITM 384 (426)
T ss_pred HHHHHHHHHHHHHHcc
Confidence 9999999999999876
No 27
>PRK10504 putative transporter; Provisional
Probab=99.74 E-value=3.4e-16 Score=144.03 Aligned_cols=162 Identities=15% Similarity=0.153 Sum_probs=114.7
Q ss_pred hhccchHHHHHHHHHhhhhhhHHHH-HHHHHHHH-HhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHH
Q 017535 68 SVIKIPSFQIIVAQGVTGSFPWSAL-SFAAMWLE-LTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRII 145 (370)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~ 145 (370)
+++|||.+...+...++....+... .+.|.|++ .+|.++.+.+++..+..++.+++.++.+++.||+++|+.
T Consensus 256 ~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~------ 329 (471)
T PRK10504 256 KLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRV------ 329 (471)
T ss_pred HHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHH------
Confidence 4788898777666555555554444 56788884 689999999999988888888999999999999998865
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchh
Q 017535 146 LAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFA 225 (370)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 225 (370)
...+..+..+... .+....... +.+.+.+..++.|++.+...+ ....+..+.+|++.+|.++|+.++..++|..+|
T Consensus 330 -~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig 405 (471)
T PRK10504 330 -LVATTLGLALVSL-LFMLVALLG-WYYLLPFVLFLQGMVNSTRFS-SMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIG 405 (471)
T ss_pred -HHHHHHHHHHHHH-HHHhccccc-cHHHHHHHHHHHHHHHHHHHH-HHHHHHHHcCCHHhccchHHHHHHHHHHHHHHH
Confidence 2333332222212 222122222 222233344555666655555 567777888999999999999999999999999
Q ss_pred hHHHHHHHHhhcCCC
Q 017535 226 PPVVGILAQHVYGFK 240 (370)
Q Consensus 226 ~~~~g~l~~~~~g~~ 240 (370)
+.+.|.+.+.. ||.
T Consensus 406 ~~i~g~ll~~~-g~~ 419 (471)
T PRK10504 406 VTIAGLLLGLF-GQQ 419 (471)
T ss_pred HHHHHHHHHHh-hhh
Confidence 99999999987 553
No 28
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.73 E-value=8.6e-16 Score=137.83 Aligned_cols=211 Identities=13% Similarity=0.041 Sum_probs=130.5
Q ss_pred ccccccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccccCcccchhhhhhHHHHhhhccchHHHHHHHHHhh
Q 017535 5 TFMGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGVT 84 (370)
Q Consensus 5 ~~~~~~gWr~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (370)
++.+++|||.+|++.+++.++..+..++..|++++++. . + +...+++++++|+|.++..+...++
T Consensus 155 ~l~~~~gw~~~f~~~a~l~~~~~~~~~~~~~~~~~~~~-~--~------------~~~~~~~~~~l~~~~~~~~~~~~~l 219 (390)
T TIGR02718 155 VLFGKFGQRPAFLLVACVPLASLVCVLWLKDRAVASPE-A--P------------LARRASLFRFFRRPLAWSLLALALL 219 (390)
T ss_pred HHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCCCcCccc-c--c------------hhhHHHHHHHHcCcCHHHHHHHHHH
Confidence 56678899999999998887766665454333221110 0 0 1112345678888886554443333
Q ss_pred hhh-hHHHHHHHHHHHHHhCCCHHHHHHHHHHHH-HHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHH
Q 017535 85 GSF-PWSALSFAAMWLELTGFSHEKTAFLMALFV-IASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLL 162 (370)
Q Consensus 85 ~~~-~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~-~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (370)
... ......+.+.|+++.|+++.+.+.+..... +..+++.+++|++.||+++|+. ...+..+........+
T Consensus 220 ~~~~~~~~~~~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~-------l~~~~~~~~~~~~~~~ 292 (390)
T TIGR02718 220 SAMTAVSGFGLSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRT-------FILGVGLAGSLALLWF 292 (390)
T ss_pred HHHHHHHHHHHhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHH-------HHHHHHHHHHHHHHHH
Confidence 333 344557788888778999999999888776 4667889999999999998865 2222222211111111
Q ss_pred H-hCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCC-CchhHHHHHHHHHHHHhhchhhHHHHHHHHhhcCC
Q 017535 163 L-VLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPE-KSRTSVYAMDRSFESILSSFAPPVVGILAQHVYGF 239 (370)
Q Consensus 163 ~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~~g~ 239 (370)
. ...........+.....+.++..+...+ ...+...+..++ +.+|+.+++.+...++|..++|.+.|.+.|.. ||
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~-G~ 369 (390)
T TIGR02718 293 AQAAFWLAPGIAVAWSCSAFGSLITGITSV-AIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRF-GY 369 (390)
T ss_pred HHHHcccCCcHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cc
Confidence 1 1111111111222222333333344433 445555555665 78999999999999999999999999999987 53
No 29
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.73 E-value=1.2e-16 Score=144.84 Aligned_cols=210 Identities=11% Similarity=0.095 Sum_probs=128.4
Q ss_pred cCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccccCcccchhhhhhHHHHhhhccchHHHHHHHHHhhhhhhH
Q 017535 10 PGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGVTGSFPW 89 (370)
Q Consensus 10 ~gWr~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (370)
.+|+++|++.++++++..++.++..++++++....+++....+ +...++.+..+|+|.++.+.+..+.....+
T Consensus 167 ~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~~~~~~l~l~~~~~~~~~ 239 (420)
T PRK09528 167 INPQINFWLGSGSALILLVLLFFAKPDAPSTAKVANALGANAS-------AVSLKDALALLKLPKFWFLVLYVIGVACFY 239 (420)
T ss_pred cCchHhHHHHHHHHHHHHHHHhcccccccchhhhccchhcccc-------cccHHHHHHHccCCCeEeehHHHHHHHHHH
Confidence 4899999998888777666655554443222111110000000 223445567888888554443333333333
Q ss_pred H-HHHHHHHHH-HH---hCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHh
Q 017535 90 S-ALSFAAMWL-EL---TGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLV 164 (370)
Q Consensus 90 ~-~~~~~~~~~-~~---~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (370)
. ...+.|.|+ +. .+.+..+.+.+.+...++.+++.++.|++.||+++|+. ..++..+.... ... ..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~-------~~~~~~l~~~~-~~l-~~ 310 (420)
T PRK09528 240 DVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNA-------LLLAGTIMAVR-IIG-SG 310 (420)
T ss_pred HHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchh-------hHHHHHHHHHH-HHH-HH
Confidence 2 224567766 33 35677788898888888999999999999999999876 23322222211 111 11
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHH-HHHHHHHhhchhhHHHHHHHHhhcCCC
Q 017535 165 LPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAM-DRSFESILSSFAPPVVGILAQHVYGFK 240 (370)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~g~l~~~~~g~~ 240 (370)
+..+ .+.+....++.++..+...+ ....++.+..|++.+++..++ .++...+|.+++|.+.|++.|.. ||.
T Consensus 311 ~~~~---~~~~~~~~~l~g~~~~~~~~-~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~-G~~ 382 (420)
T PRK09528 311 FATG---PLEVSILKLLHAFEVPFLLV-GVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSI-GFQ 382 (420)
T ss_pred hccc---HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhh-Cch
Confidence 2222 22334445555555554444 445677888899988888766 67788899999999999999987 543
No 30
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.73 E-value=4.7e-16 Score=138.87 Aligned_cols=206 Identities=14% Similarity=0.102 Sum_probs=131.6
Q ss_pred ccccccccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccccCcccchhhhhhHHHHhhhccchHHHHHHHHH
Q 017535 3 PMTFMGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQG 82 (370)
Q Consensus 3 g~~~~~~~gWr~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (370)
++.+.+.+|||++|++.+++.++..++.++++||+++....+ .. + .+.+..++++.++......
T Consensus 145 ~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-----------~---~~~~~~~~~~~~~~~~~~~ 208 (375)
T TIGR00899 145 AFWLALGFGFTVMFLTAALAFVLCGVLVWLFLPSYPRGAPGA--LT-----------R---LEVRGLLASRDTRLLFVAC 208 (375)
T ss_pred HHHHHHhcccHHHHHHHHHHHHHHHHHHHHhCCCcccCcccc--cC-----------c---chhhhhhcCcchHHHHHHH
Confidence 445667789999999999887777776666667633221110 00 0 0122356666655443333
Q ss_pred hhhhhh-HHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHH
Q 017535 83 VTGSFP-WSALSFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAAL 160 (370)
Q Consensus 83 ~~~~~~-~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (370)
+..... .....+.|.|+ +++|.++.+.+.+.....+..+++.++.|++.||+++|+. ..++..+..... .
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~-------~~~~~~~~~~~~-~ 280 (375)
T TIGR00899 209 TLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRL-------MLLAALAGVAFY-T 280 (375)
T ss_pred HHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhH-------HHHHHHHHHHHH-H
Confidence 322332 23345778888 7889999999988877777788889999999999998865 222222221111 1
Q ss_pred HHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhhcCC
Q 017535 161 LLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYGF 239 (370)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~~g~ 239 (370)
.+. .. + ..+.+.+..++.|++.+...+ ....+..+..|+ +++++.++.+...++|..++|.+.|.+.+.. ||
T Consensus 281 ~~~-~~--~-~~~~~~~~~~~~g~~~g~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~-g~ 352 (375)
T TIGR00899 281 GLA-AD--N-SLWALLMLQLLNAIFIGILAG-IGMLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGILAERW-SY 352 (375)
T ss_pred HHH-HH--H-HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cc
Confidence 111 11 1 123334444555665555555 556777787765 4779999999999999999999999999876 53
No 31
>PRK09669 putative symporter YagG; Provisional
Probab=99.72 E-value=3.1e-15 Score=136.43 Aligned_cols=207 Identities=14% Similarity=0.196 Sum_probs=132.8
Q ss_pred ccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccccCcccchhhhhhHHHHhhhccchHHHHHHHHHhhhhhh
Q 017535 9 IPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGVTGSFP 88 (370)
Q Consensus 9 ~~gWr~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (370)
..||+..+.+.+++++++.+++++..||+..++. ++ + .+.++.++.++|||.++.++...++....
T Consensus 179 ~~g~~~~~~i~~ii~~v~~~~~~~~~~e~~~~~~---~~----~-------~~~~~~~~~~~~n~~~~~l~~~~~~~~~~ 244 (444)
T PRK09669 179 QKGYFYAMMVMGLLGVVLFFCCFFMTKERYTPEV---DN----S-------SSVWKDLKLLLGNSQWRIMFIFNVVLLTA 244 (444)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhCCeEEecCCCC---cC----C-------CCHHHHHHHHhCCchHHHHHHHHHHHHHH
Confidence 4589999999998888777766666666322110 00 0 23456677899999987766655544444
Q ss_pred HHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCC
Q 017535 89 WSALSFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPD 167 (370)
Q Consensus 89 ~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (370)
.........|+ +....++...+.+.....+..+++.++.++++||+|+|+. ...+..+..+.....+. .+.
T Consensus 245 ~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~-------~~~~~~~~~~~~~~~~~-~~~ 316 (444)
T PRK09669 245 VVTRGGATLYYVNYVLLRPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRA-------FKWTIVAFVILSALIFF-IPP 316 (444)
T ss_pred HHHHhhhhheeeeeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHH-------HHHHHHHHHHHHHHHHH-hCc
Confidence 43333333444 4332234444555555677888899999999999998865 22222222211111221 221
Q ss_pred CCChhHHHHHHHHHHHHHHHhcCCCCccchhccccC-------CCchhHHHHHHHHHHHHhhchhhHHHHHHHHhhcCCC
Q 017535 168 DPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVP-------EKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYGFK 240 (370)
Q Consensus 168 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~~g~~ 240 (370)
...+.+.+..++.|++.+...+ ..++++.|..+ .+..|..+|+.+++.++|.++++.+.|.+.+.. ||+
T Consensus 317 --~~~~~~~~~~~i~g~~~~~~~~-~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~-Gy~ 392 (444)
T PRK09669 317 --SNVWLIFALNILFNFIQNLTTP-LQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWV-DYV 392 (444)
T ss_pred --chHHHHHHHHHHHHHHHHHHHH-HHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCC
Confidence 2233344455566776666666 77888888775 455788899999999999999999999999988 886
Q ss_pred C
Q 017535 241 P 241 (370)
Q Consensus 241 ~ 241 (370)
.
T Consensus 393 ~ 393 (444)
T PRK09669 393 G 393 (444)
T ss_pred C
Confidence 4
No 32
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.72 E-value=4.3e-16 Score=138.50 Aligned_cols=214 Identities=13% Similarity=0.107 Sum_probs=141.9
Q ss_pred ccccccccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccccCcccchhhhhhHHHHhhhccchHHHHHHHHH
Q 017535 3 PMTFMGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQG 82 (370)
Q Consensus 3 g~~~~~~~gWr~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (370)
++.+.+..|||+.|++.++..++..++.++ .+.|+.++.++++.+ + +..++..+.++.++|+|.++......
T Consensus 148 ~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~----~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (365)
T TIGR00900 148 GGLMYATLGIKWAIWVDAVGFAISALLIVS-VRIPELAASEIQALS----N---AVLRDTREGIKFVLKNPLLRTLLLLA 219 (365)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHh-cccccCCCccccccc----h---hHHHHHHhHHHHHHcCcHHHHHHHHH
Confidence 445567789999999887766555444333 333222111110000 0 01133445566788888866555444
Q ss_pred hhhh-hhHHHH-HHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHH
Q 017535 83 VTGS-FPWSAL-SFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAA 159 (370)
Q Consensus 83 ~~~~-~~~~~~-~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (370)
+... ...... .+.|.|. +.+|.+..+.+.+.....++.+++.++.+++.||+++++. ...+..+.....
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-------~~~~~~~~~~~~- 291 (365)
T TIGR00900 220 LLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMAL-------MTGAIFVIGLAI- 291 (365)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHH-------HHHHHHHHHHHH-
Confidence 4333 334444 6778888 4589999999999999999999999999999999887754 222222221111
Q ss_pred HHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 160 LLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
..+. .... +.+...+..++.|++.+...+ ...+++.+.+|++.|+++.|+.++..++++.++|.+.|.+.|..
T Consensus 292 ~~~~-~~~~--~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~ 364 (365)
T TIGR00900 292 LVVG-LTPP--NFPLFLVLWFAIGVGYGPINV-PQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADHL 364 (365)
T ss_pred HHHH-hhch--hHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 1111 1111 234455666777877777676 67888999999999999999999999999999999999999875
No 33
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.72 E-value=1.7e-15 Score=135.89 Aligned_cols=202 Identities=11% Similarity=0.103 Sum_probs=122.6
Q ss_pred ccccccccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccccCcccchhhhhhHHHHhhhccc-hH-HHHHHH
Q 017535 3 PMTFMGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKI-PS-FQIIVA 80 (370)
Q Consensus 3 g~~~~~~~gWr~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~ 80 (370)
++.+.+++|||+.|++.++++++..++.+++.||+++.+.... .+ . +. ..++ +. ++.+..
T Consensus 163 ~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~-------~~-------~~~~~~~~~~~~~~ 224 (393)
T PRK15011 163 AYALAMGFSFTVMYLSAAVAFIVCGVMVWLFLPSMRKELPLAT--GT--L-------EA-------PRRNRRDTLLLFVI 224 (393)
T ss_pred HHHHHHhcChHHHHHHHHHHHHHHHHHHHhhcCccCCCCcccc--cc--c-------cc-------cccccccHHHHHHH
Confidence 4456678899999999998888877777776776432211100 00 0 00 0112 11 222222
Q ss_pred HHhhhhhhHHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHH
Q 017535 81 QGVTGSFPWSALSFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAA 159 (370)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (370)
........+....+.|.|+ +.+|+++.+.+.+.+...++.+++.++.|+++||+++|+. ...+....... .
T Consensus 225 ~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~-------~~~~~~~~~~~-~ 296 (393)
T PRK15011 225 CTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFL-------MRVAAVAGVCF-Y 296 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHH-------HHHHHHHHHHH-H
Confidence 2222222233336789888 7789999999998887778888999999999999998864 22222222111 1
Q ss_pred HHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 160 LLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
.... ... . .+...+..+..++..+...+ ....+..+..|+ .+|++.++++...++|+.++|.+.|.+.|..
T Consensus 297 ~~~~-~~~--~-~~~~l~~~~l~~~~~g~~~~-~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~ 367 (393)
T PRK15011 297 AGML-MAH--S-PAILLGLQLLNAIYIGILGG-IGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAEIW 367 (393)
T ss_pred HHHH-HHh--h-HHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1111 111 1 12222233333333333333 335566777775 5999999999999999999999999999876
No 34
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.71 E-value=1.2e-15 Score=130.48 Aligned_cols=208 Identities=18% Similarity=0.147 Sum_probs=142.9
Q ss_pred cccccC---chhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccccCcccchhhhhhH-HHHhhhccchHHHHHHHH
Q 017535 6 FMGIPG---WRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLI-QEAKSVIKIPSFQIIVAQ 81 (370)
Q Consensus 6 ~~~~~g---Wr~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 81 (370)
+....| ||.+..+..+..++..++.++..+|.++++... +... ..++.+++++..|.+.+.
T Consensus 162 v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~---------------~~~~~~~~~~v~~~~~~W~lsll 226 (417)
T COG2223 162 VAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASV---------------KPQLPAQLKAVFSNKDTWLLSLL 226 (417)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccc---------------cccchhHHHHHhcCcchHHHHHH
Confidence 344567 999999998888888888888888733322111 1111 445678888886655544
Q ss_pred Hhhhhhh-HHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHH
Q 017535 82 GVTGSFP-WSALSFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAA 159 (370)
Q Consensus 82 ~~~~~~~-~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (370)
....+.. .++..++|.|+ +++|.++.+++.+.....+.+.+.++++|+++||+|.++. .......+..+..
T Consensus 227 Y~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv-------~~~~f~~~~~~~~ 299 (417)
T COG2223 227 YFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRV-------TLAVFVGMALAAA 299 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhH-------HHHHHHHHHHHHH
Confidence 4444444 45558999999 8999999999999999999999999999999999999876 2333233322222
Q ss_pred HHHHhCCCC--CChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhhc
Q 017535 160 LLLLVLPDD--PSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVY 237 (370)
Q Consensus 160 ~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~~ 237 (370)
+.....+.. ....+.....++..+++.+.-.. .++.++..++|+ +.|.+.|+...++.+|+..-|...|...+.++
T Consensus 300 ~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnG-svfk~Ip~if~~-~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg 377 (417)
T COG2223 300 LLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNG-SVFKMIPVIFPK-ETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTG 377 (417)
T ss_pred HHHccccccccCcchHHHHHHHHHHHHHhccCcc-hheeechHHHHh-hhhHHHHHHHHhccccccchhHHHHHHHHhcc
Confidence 222222111 12233333444445555554444 567777777765 59999999999999999999999999999884
No 35
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.71 E-value=9.2e-16 Score=141.63 Aligned_cols=225 Identities=14% Similarity=0.043 Sum_probs=144.9
Q ss_pred CccccccccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCcc----------------ccCcccchhhh-----
Q 017535 2 APMTFMGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQ----------------VSSKSFRSDVK----- 60 (370)
Q Consensus 2 ~g~~~~~~~gWr~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~----- 60 (370)
+++++.+++||||.|++...++++..++.++++|+++.++..+.+... ......+....
T Consensus 150 lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 229 (495)
T PRK14995 150 VGGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQAGRRDQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTL 229 (495)
T ss_pred HHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHH
Confidence 466788899999999999888877777666666663222111100000 00000000000
Q ss_pred ---------hhHHHH--------hhhccchHHHHHHHHHhhhhh-hHHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHH
Q 017535 61 ---------VLIQEA--------KSVIKIPSFQIIVAQGVTGSF-PWSALSFAAMWL-ELTGFSHEKTAFLMALFVIASS 121 (370)
Q Consensus 61 ---------~~~~~~--------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ 121 (370)
....+. .+++|+|.+.......+.... .++...+.|.|+ ..+|+++.++++...+..++..
T Consensus 230 ~~~~~~l~~f~~~e~~~~~p~~~~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~ 309 (495)
T PRK14995 230 LTGALLLGLFIRTQLAASRPMIDMRLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASG 309 (495)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcCHHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 000000 257788886555444433333 345557889999 6789999999999999999999
Q ss_pred HhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccc
Q 017535 122 LGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEI 201 (370)
Q Consensus 122 ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 201 (370)
++.++.|++.||+++|+. ...+..+....... +........ .+......++.|++.+...+ .....+.+.
T Consensus 310 ~~~~~~g~l~~r~g~~~~-------~~~g~~~~~~~~~~-l~~~~~~~~-~~~~~~~~~l~G~g~g~~~~-~~~~~~~~~ 379 (495)
T PRK14995 310 FSGPIAGILVSRLGLRLV-------ATGGMALSALSFYG-LAMTDFSTQ-QWQAWGLMALLGFSAASALL-ASTSAIMAA 379 (495)
T ss_pred HHHHHHHHHHHHcCchHH-------HHHHHHHHHHHHHH-HHHhcCCCc-hHHHHHHHHHHHHhHHHHHH-HHHHHHHhc
Confidence 999999999999998754 23332222211111 111121222 23344556677777777666 667777888
Q ss_pred cCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 202 VPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 202 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
+|+++++.+.++.++..++|+.+|+.+.|.+.+..
T Consensus 380 ~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~~~ 414 (495)
T PRK14995 380 APPEKAAAAGAIETMAYELGAGLGIAIFGLLLSRS 414 (495)
T ss_pred CCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998753
No 36
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.71 E-value=3.9e-16 Score=140.79 Aligned_cols=221 Identities=15% Similarity=0.149 Sum_probs=130.3
Q ss_pred cccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCC-CCCCCcc--------c-----cCccc-chhhhhhHHHHhhhccc
Q 017535 8 GIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDG-GTANSDQ--------V-----SSKSF-RSDVKVLIQEAKSVIKI 72 (370)
Q Consensus 8 ~~~gWr~~f~i~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~--------~-----~~~~~-~~~~~~~~~~~~~~~~~ 72 (370)
+..|||+.|++.++++++..++.++++||+++... ..+++++ . .++.. .+........++.++ +
T Consensus 163 ~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 241 (412)
T TIGR02332 163 ALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKAKWLDEEDKKALKEMIDNDQLTLEQPEGAFAHAAMPQRSMLREIF-T 241 (412)
T ss_pred CccchhHHHHHHHHHHHHHHHHHhhccCCCcccCCCCCHHHHHHHHHHHHhccccccccccccccccccHHHHHHHhc-C
Confidence 35799999999999888877777777787443211 0000000 0 00000 000001112233444 4
Q ss_pred hHHHHHHHHH-hhhhhhHHHHHHHHHHHHHh--CCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHH
Q 017535 73 PSFQIIVAQG-VTGSFPWSALSFAAMWLELT--GFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQI 149 (370)
Q Consensus 73 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~ 149 (370)
+.++.....+ +.....+.+.+|+|.|++++ |.+..+++.+.....++.++|.+++|+++||+++|+.. ...
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~------~~~ 315 (412)
T TIGR02332 242 PAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHH------TAL 315 (412)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHH------HHH
Confidence 6655544443 33444456668999999553 67888899999999999999999999999999876430 111
Q ss_pred HHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHH
Q 017535 150 SSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVV 229 (370)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 229 (370)
...+.... ..+.. .. ... .. ....+.+.+++.....+ ..+....+..|++.|++++|+.+...++|++++|.+.
T Consensus 316 ~~~~~~~~-~~~~~-~~-~~~-~~-~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~ 389 (412)
T TIGR02332 316 PYLFAAAG-WLLAS-AT-DHN-LI-QLLGIIMASMGSFSAMA-IFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLI 389 (412)
T ss_pred HHHHHHHH-HHHHH-hc-CCH-HH-HHHHHHHHHHHhhhhhh-HHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhc
Confidence 11111111 11111 11 111 11 11111222222222222 2334445678899999999999999999999999999
Q ss_pred HHHHHhhcCCCC
Q 017535 230 GILAQHVYGFKP 241 (370)
Q Consensus 230 g~l~~~~~g~~~ 241 (370)
|.+.|..++|..
T Consensus 390 g~i~~~~g~~~~ 401 (412)
T TIGR02332 390 GILKDATGSFNS 401 (412)
T ss_pred ccccccCCCCch
Confidence 999998756554
No 37
>PRK11462 putative transporter; Provisional
Probab=99.71 E-value=1.9e-14 Score=131.24 Aligned_cols=205 Identities=7% Similarity=0.115 Sum_probs=124.8
Q ss_pred cCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccccCcccchhhhhhHHHHhhhccchHHHHHHHHHhhhhhhH
Q 017535 10 PGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGVTGSFPW 89 (370)
Q Consensus 10 ~gWr~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (370)
.||+....+.+++++++..++++..||+.+.+.. + ....+.++.+++||.++.++...++.....
T Consensus 180 ~g~~~~~~i~~ii~~i~~~i~~~~~kE~~~~~~~--------~-------~~~~~~l~~~~~Nk~~~~l~~~~~~~~~~~ 244 (460)
T PRK11462 180 LGFQGGIAVLSVVAFMMLAFCFFTTKERVEAPPT--------T-------TSMREDLRDIWQNDQWRIVGLLTIFNILAV 244 (460)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhcceeccCCCcc--------C-------CCHHHHHHHHhCChHHHHHHHHHHHHHHHH
Confidence 4788888888888777776666655553221110 0 124456678899999877665555444443
Q ss_pred HHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCC
Q 017535 90 SAL-SFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDD 168 (370)
Q Consensus 90 ~~~-~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (370)
... .....|.+...-++...+.+.....++.+++.+++++++||+++|+. ...+..+..+.... +...+..
T Consensus 245 ~~~~~~~~y~~~y~~g~~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~-------~~~~~~~~~~~~~~-~~~~~~~ 316 (460)
T PRK11462 245 CVRGGAMMYYVTWILGTPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTI-------FWWTNALLAVISLA-MFFVPMQ 316 (460)
T ss_pred HHHHhHhhhhhhhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHH-------HHHHHHHHHHHHHH-HHHhchh
Confidence 333 22333334333344445566667788889999999999999998854 12111211111111 1112222
Q ss_pred CChhHHHHHHHHHHHHHHHhcCCCCccchhccccC-------CCchhHHHHHHHHHHHHhhchhhHHHHHHHHhhcCCCC
Q 017535 169 PSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVP-------EKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYGFKP 241 (370)
Q Consensus 169 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~~g~~~ 241 (370)
. .+.+.+..++.|++.+...+ ..++++.|..+ .+..|..++..++..++|.++++.+.|++.+.. ||..
T Consensus 317 ~--~~~~~~~~~l~g~~~~~~~~-l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~-Gy~~ 392 (460)
T PRK11462 317 A--SITMFVFIFVIGVLHQLVTP-IQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYG-GYDA 392 (460)
T ss_pred H--HHHHHHHHHHHHHHHHHHHH-HHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCC
Confidence 1 11222333445555544444 55777787766 555677788888999999999999999999987 8864
No 38
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.71 E-value=6.5e-15 Score=133.26 Aligned_cols=219 Identities=19% Similarity=0.214 Sum_probs=154.8
Q ss_pred ccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccccCcccchhhhhhHHHHhhhccchHH-HHHHHHHhhhhh
Q 017535 9 IPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSF-QIIVAQGVTGSF 87 (370)
Q Consensus 9 ~~gWr~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 87 (370)
..+-|..+.+.++.-++..+..++++|+++.++..+.. ........++.++.+|++.|.|.. +.++..+++.-.
T Consensus 222 ~~~~r~~~~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~-----~~~~~~g~~~l~~t~k~~~~~~~~~~fLia~~l~~dg 296 (477)
T PF11700_consen 222 TWAIRVAFLIVALWWLVFSIPLFLWLPDRPGPRPLPSG-----SSYLRFGFKRLWRTFKEIRKLRQLFLFLIAYFLYSDG 296 (477)
T ss_pred chhhhHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcc-----hhHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHH
Confidence 34568899999999888888888888875432111100 011112235566667777778884 445555666666
Q ss_pred hHHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHH---
Q 017535 88 PWSALSFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLL--- 163 (370)
Q Consensus 88 ~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 163 (370)
..+++.....|. +.+|++..+...+..+..+.+++|+++.|++.||+|.|..+ + +.+..++...+....++
T Consensus 297 ~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~---~--l~~~l~~~~~i~~~g~~G~~ 371 (477)
T PF11700_consen 297 VNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKR---T--LLISLILWIIIPLYGLFGFW 371 (477)
T ss_pred HHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhH---H--HHHHHHHHHHHHHHHHHHhh
Confidence 667778888888 79999999999999999999999999999999999998331 1 22222222111112121
Q ss_pred hCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhhcC
Q 017535 164 VLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYG 238 (370)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~~g 238 (370)
.........+.+.+..++.|++.|...+ ...++.++..|+++.+..+|++.+.....+.+||.+.|.+.+.+++
T Consensus 372 ~~~~g~~~~~~f~~~a~~~G~~~G~~qs-~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~ 445 (477)
T PF11700_consen 372 PSFFGLKSPWEFWVLAVLIGLFMGGIQS-ASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGS 445 (477)
T ss_pred hcccCcccHHHHHHHHHHHHHHhhhHHH-HHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 1111122234466666778888888777 7899999999999999999999999999999999999999999843
No 39
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.71 E-value=1.1e-15 Score=137.01 Aligned_cols=158 Identities=16% Similarity=0.115 Sum_probs=104.4
Q ss_pred hhccchHHHHHHHHH-hhhhhhHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHH
Q 017535 68 SVIKIPSFQIIVAQG-VTGSFPWSALSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIIL 146 (370)
Q Consensus 68 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~ 146 (370)
+.++++..+...... +.....+...+|+|.|++++|++..+++.+.++..++.++++++.|++.||+++|+.
T Consensus 200 ~~l~~~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~------- 272 (393)
T PRK09705 200 RVVFTPRAWTLGVYFGLINGGYASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKL------- 272 (393)
T ss_pred ccccCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHH-------
Confidence 345566654443333 333333455689999996689999999999999999999999999999999988754
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccC-CCchhHHHHHHHHHHHHhhchh
Q 017535 147 AQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVP-EKSRTSVYAMDRSFESILSSFA 225 (370)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~ 225 (370)
..++..+... ....+...+.. . .. +. .++.|++.+...| .......+..+ ++.+|+.+|+.+.+.++++.++
T Consensus 273 ~~~~~~l~~~-~~~~~~~~~~~-~-~~-~~--~~l~g~g~g~~~~-~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~g 345 (393)
T PRK09705 273 LMLALVLQLV-GFCGFIWLPLQ-L-PV-LW--AMVCGLGLGGAFP-LCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLA 345 (393)
T ss_pred HHHHHHHHHH-HHHHHHHccch-H-HH-HH--HHHHHHhccchHH-HHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222222221 11211112221 1 11 21 2234555454445 44445555554 5679999999999999999999
Q ss_pred hHHHHHHHHhhcCC
Q 017535 226 PPVVGILAQHVYGF 239 (370)
Q Consensus 226 ~~~~g~l~~~~~g~ 239 (370)
|.+.|++.|..++|
T Consensus 346 p~~~G~l~~~~g~~ 359 (393)
T PRK09705 346 PWFSGVLRSISGNY 359 (393)
T ss_pred HHHHHHHHHHhCCc
Confidence 99999999998543
No 40
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.70 E-value=2.9e-15 Score=136.18 Aligned_cols=202 Identities=15% Similarity=0.125 Sum_probs=116.7
Q ss_pred ccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccccCcccchhhhhhHHHHhhhccchHHHHHHH-HHhh-hh
Q 017535 9 IPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVA-QGVT-GS 86 (370)
Q Consensus 9 ~~gWr~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~ 86 (370)
.+|||++|++.++++++.. .....+||+++.+. ++ .....++++++|+|..+.... ..+. ..
T Consensus 194 ~~gWr~~F~i~~~~~ll~~-~~~~~~~e~~~~~~-----~~----------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 257 (432)
T PRK10406 194 EWGWRIPFALGAVLAVVAL-WLRRQLDETSQQET-----RA----------LKEAGSLKGLWRNRRAFIMVLGFTAAGSL 257 (432)
T ss_pred ccchHHHHHHHHHHHHHHH-HHHhcCCCCchHHH-----hh----------hcccccHHHHHhhHHHHHHHHHHHHHHHH
Confidence 6799999998777766543 22233344221100 00 000112456777877554433 3333 33
Q ss_pred hhHHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhC
Q 017535 87 FPWSALSFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVL 165 (370)
Q Consensus 87 ~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (370)
..+...+|+|.|+ +.+|++..+.+...++..++..++.++.|+++||++||+. ..+...+........+...
T Consensus 258 ~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~-------~~~~~~~~~~~~~~~~~~~ 330 (432)
T PRK10406 258 CFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTS-------MLCFGSLAALFTVPILSAL 330 (432)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHH-------HHHHHHHHHHHHHHHHHHH
Confidence 4466668999999 6789999999988888888888889999999999998864 2222221111111111111
Q ss_pred CCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHH-hhchhhHHHHHHHHhh
Q 017535 166 PDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESI-LSSFAPPVVGILAQHV 236 (370)
Q Consensus 166 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~g~l~~~~ 236 (370)
........ ....+....+..+...+ ..+.+..|.+|++.|+++.|+.+.+.++ .+...|.+.+. .+..
T Consensus 331 ~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~-l~~~ 399 (432)
T PRK10406 331 QNVSSPYA-AFGLVMCALLIVSFYTS-ISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALS-LKSI 399 (432)
T ss_pred HcCCcHHH-HHHHHHHHHHHHHHHHH-HHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHH-HHHh
Confidence 11111111 11111212222222223 4467788999999999999999887765 34557777774 4554
No 41
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.70 E-value=2.2e-15 Score=134.66 Aligned_cols=207 Identities=14% Similarity=0.003 Sum_probs=137.5
Q ss_pred ccccccccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccccCcccchhhhhhHHHHhhhccchHHHHHHHHH
Q 017535 3 PMTFMGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQG 82 (370)
Q Consensus 3 g~~~~~~~gWr~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (370)
++.+.+++|||+.|++.+++.+ +.++.+...|++++++..+ ++ + ....+.+++++|+|.++......
T Consensus 148 ~g~l~~~~g~~~~f~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~---~-------~~~~~~~~~~l~~~~~~~~l~~~ 214 (382)
T TIGR00902 148 FGGLIGMFDEQNILAILTAGLA-FMLIGFLIKPTIPPKDAIP--ED---E-------SQGDSAFIALLKNPMNLRFLAAV 214 (382)
T ss_pred HHHHHHHcChhHHHHHHHHHHH-HHHHHHHcCCCCCCCcccc--cc---c-------cccchhHHHHHcChHHHHHHHHH
Confidence 5667788999999988765533 2333333333322111100 00 0 11122356788999977665544
Q ss_pred hhhhhh-HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHH
Q 017535 83 VTGSFP-WSALSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALL 161 (370)
Q Consensus 83 ~~~~~~-~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (370)
++.... ....++.|.|+++.|.++.+.|.+.+...++.+++.++.+++.||++.|+. +.++.+..... ...
T Consensus 215 ~l~~~~~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~-------l~~~~~~~~~~-~~~ 286 (382)
T TIGR00902 215 CLIQGAHAAYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDL-------LLISAIACVGR-WAI 286 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHH-------HHHHHHHHHHH-HHH
Confidence 443333 445578899997799999999999988888999999999999999988865 33333222211 111
Q ss_pred HHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHH-HHHHhhchhhHHHHHHHHhh
Q 017535 162 LLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRS-FESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~g~l~~~~ 236 (370)
+ .. ....+.+....++.|+..+...+ ....++.+. |++.++++.++++. ...+|..++|.++|++.|..
T Consensus 287 ~-~~---~~~~~~~~~~q~l~g~~~~~~~~-~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~ 356 (382)
T TIGR00902 287 I-GA---IEAFPLIFLLQILHCGTFAVCHL-AAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTL 356 (382)
T ss_pred H-Hh---HhhHHHHHHHHHHHHHHHHHHHH-HHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 1 11 22234455667777877777777 667788876 88889999999874 56788899999999999987
No 42
>PRK09952 shikimate transporter; Provisional
Probab=99.70 E-value=2.3e-15 Score=136.93 Aligned_cols=210 Identities=13% Similarity=0.071 Sum_probs=120.8
Q ss_pred cccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccccCcccchhhhhhHHHHhhhccchHHHHH-H-HHHhhh
Q 017535 8 GIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQII-V-AQGVTG 85 (370)
Q Consensus 8 ~~~gWr~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~ 85 (370)
..+|||++|++.+++.++. +.....+||+++....+.+.++ .+ .. .. ..+.++++|..+.. . ..++..
T Consensus 194 ~~~gWr~~f~~~~~~~l~~-~~l~~~~~es~~~~~~~~~~~~-~~-~~----~~---~~~~l~~~~~~~~~~~~~~~~~~ 263 (438)
T PRK09952 194 LSWGWRIPFLFSIVLVLIA-LWVRNGMEESAEFEQQQHEQAA-AK-KR----IP---VIEALLRHPGAFLKIIALRLCEL 263 (438)
T ss_pred hccChHHHHHHHHHHHHHH-HHHHHhCCCChhHHHHHhhccc-cc-cc----CC---HHHHHHHchHHHHHHHHHHHHHH
Confidence 3589999999887765442 2222333442211000000000 00 00 01 11234566664333 2 223333
Q ss_pred hhhHHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHh
Q 017535 86 SFPWSALSFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLV 164 (370)
Q Consensus 86 ~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (370)
...|...+|.|.|+ +.+|++......+....++..+++.++.|+++||++||+. ...+.++........+..
T Consensus 264 ~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~-------~~~~~~~~~~~~~~~~~~ 336 (438)
T PRK09952 264 LTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRV-------YITGALIGTLSAFPFFMA 336 (438)
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHH-------HHHHHHHHHHHHHHHHHH
Confidence 34455668999998 7789988766666666677888899999999999998865 222222222111111111
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHH-HHhhchhhHHHHHHHHhh
Q 017535 165 LPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFE-SILSSFAPPVVGILAQHV 236 (370)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~g~l~~~~ 236 (370)
...... .+.+.+..++.+++.+...+ ..++++.|.+|.+.|+++.++.+... .+++.++|.+.|++.+..
T Consensus 337 ~~~~~~-~~~~~~~~~l~~~~~~~~~~-~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~ 407 (438)
T PRK09952 337 LEAQSI-FWIVFFSIMLANIAHDMVVC-VQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYF 407 (438)
T ss_pred HHcCCh-HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 111111 22223333444555555455 56888899999999999999966554 488899999999999865
No 43
>PRK03699 putative transporter; Provisional
Probab=99.70 E-value=2e-15 Score=135.66 Aligned_cols=201 Identities=16% Similarity=0.115 Sum_probs=123.9
Q ss_pred ccccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccccCcccchhhhhhHHHHhhhccchHHHHHH-HHHhhh
Q 017535 7 MGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIV-AQGVTG 85 (370)
Q Consensus 7 ~~~~gWr~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 85 (370)
.+..|||++|++.+++.++..++.++ .+.|+..+... ++ .. .. .+..+ ++.++... ..++..
T Consensus 156 ~~~~gw~~~f~~~~~~~~~~~~~~~~-~~~p~~~~~~~-~~--~~--------~~----~~~~~-~~~~~~~~~~~~~~~ 218 (394)
T PRK03699 156 ARSIEWYWVYACIGLVYVAIFILTLF-SEFPALGKHAP-KA--DK--------PV----AKEKW-GIGVLFLAIAALLYI 218 (394)
T ss_pred hccccHHHHHHHHHHHHHHHHHHHHh-cCCccccccCc-cc--cC--------cc----ccccC-ChHHHHHHHHHHHHH
Confidence 34679999999988877766554432 22232111100 00 00 00 01111 33433333 333333
Q ss_pred hhhHHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHh
Q 017535 86 SFPWSALSFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLV 164 (370)
Q Consensus 86 ~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (370)
...+....|+|.|+ +.+|+++.+.+.+.+.+.++..+++++.|+++||+++|+. ......+... ....+.
T Consensus 219 ~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~-------l~~~~~~~~~-~~~~~~- 289 (394)
T PRK03699 219 LAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRI-------LTVLAGLALV-LMYLFV- 289 (394)
T ss_pred HHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhH-------HHHHHHHHHH-HHHHHH-
Confidence 33455668999999 7789999999999999999999999999999999998865 2222222221 112221
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhhcCC
Q 017535 165 LPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYGF 239 (370)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~~g~ 239 (370)
...+. ..+.+..+..|++.+...+ ...+...+..| +.++...+....+.++|+.++|.+.|++.+.. |+
T Consensus 290 ~~~~~---~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~-g~ 358 (394)
T PRK03699 290 NTDDP---SHLLYAILGLGFFSSAIYT-TIITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVAHF-GL 358 (394)
T ss_pred HcCCc---hHHHHHHHHHHHHHHHHHH-HHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHh-Cc
Confidence 12211 1233445566666655555 44555566555 44678888888899999999999999999987 53
No 44
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.70 E-value=3.1e-15 Score=134.03 Aligned_cols=207 Identities=15% Similarity=0.102 Sum_probs=131.5
Q ss_pred ccccccccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccccCcccchhhhhhHHHHhhhccchHHHHHHHHH
Q 017535 3 PMTFMGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQG 82 (370)
Q Consensus 3 g~~~~~~~gWr~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (370)
++.+.+.+|||++|++.+++.++..++.++..||+++.+... + .+..++.+++++++|.++......
T Consensus 149 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~-------~~~~~~~~~~~~~~~~~~~~~~~~ 215 (385)
T TIGR00710 149 GGYILVWLSWHAIFAFLSLAGILLSALIFFILPETLPYEARI------Q-------ISTYFETFLLLLKSKMFWGYALIY 215 (385)
T ss_pred HHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcccC------C-------HHHHHHHHHHHHcCchhHHHHHHH
Confidence 345566789999999998888777776666666543221110 0 023345566788888866554433
Q ss_pred hhhh-hhHHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHH
Q 017535 83 VTGS-FPWSALSFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAAL 160 (370)
Q Consensus 83 ~~~~-~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (370)
.... ..+....+.|.++ +.+|+++.+.+.+.....++.+++.++.|++.||+++|+. ...+..+.......
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~-------~~~~~~~~~~~~~~ 288 (385)
T TIGR00710 216 GASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSL-------LRMGLILFAVSAVL 288 (385)
T ss_pred HHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHH-------HHHHHHHHHHHHHH
Confidence 3333 3344456778888 6899999999999999999999999999999999998865 22222221111111
Q ss_pred HHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHH
Q 017535 161 LLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGI 231 (370)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~ 231 (370)
..............+....++.|++.+...+ .......+..| +.++++.++.+.....++.+.+.+.+.
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~~ 357 (385)
T TIGR00710 289 LEITAILGLGSWAMIIGPMMFVGIGNSMISS-IAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVSL 357 (385)
T ss_pred HHHHHHhccchHHHHHHHHHHHHHHHHHHHH-HHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1111111111233334445556666666566 55666677666 569999999999888777766666663
No 45
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.70 E-value=1.9e-15 Score=136.36 Aligned_cols=163 Identities=12% Similarity=0.025 Sum_probs=110.0
Q ss_pred HhhhccchHHHHHHHHHhhhhhh-HHHHHHHHHHHHHhCCCH--------HHHHHHHHHHHHHHHHhHHHHHHHHHHHhh
Q 017535 66 AKSVIKIPSFQIIVAQGVTGSFP-WSALSFAAMWLELTGFSH--------EKTAFLMALFVIASSLGGLFGGRMGDFLSA 136 (370)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~s~--------~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~ 136 (370)
.+.++|+|.++.+....++.... .....+.|.|+++.|.++ ...+.+.++..+..+++.++.|+++||+|+
T Consensus 201 ~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~ 280 (418)
T TIGR00889 201 AFILFKNKRMAIFFFFSMLLGAPLQITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGI 280 (418)
T ss_pred HHHHhcCCCeeeHHHHHHHHHhHHHHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 34678888865554444433333 233366788886666553 566888888899999999999999999999
Q ss_pred hCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHH-
Q 017535 137 RFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDR- 215 (370)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~- 215 (370)
|+. +.++.++......+... ........+.+.+..++.|++.+...+ ....++.+.+|++.|+++.|+.+
T Consensus 281 r~~-------l~~~~~~~~v~~~l~~~-~~~~~~~~~~l~l~~~l~g~~~~~~~~-~~~~~i~~~~p~~~~g~~~g~~~~ 351 (418)
T TIGR00889 281 KKV-------MLLSLVAWALRFGFFAY-GDPEYFGYALLFLSMIVYGCAFDFFNI-SGSVFVEKEVPVHIRASAQGLFTL 351 (418)
T ss_pred HHH-------HHHHHHHHHHHHHHHHH-cCcchhhHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHH
Confidence 875 33333332222112211 111111133344556666766666555 56778899999999999999997
Q ss_pred HHHHHhhchhhHHHHHHHHhhc
Q 017535 216 SFESILSSFAPPVVGILAQHVY 237 (370)
Q Consensus 216 ~~~~~~~~~~~~~~g~l~~~~~ 237 (370)
+...+|.++||.+.|++.|..+
T Consensus 352 ~~~~lg~~iGp~l~G~l~~~~g 373 (418)
T TIGR00889 352 MCNGFGSLLGYILSGVMVEKMF 373 (418)
T ss_pred HHHhhHHHHHHHHHHHHHHHhc
Confidence 5678999999999999999873
No 46
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.69 E-value=5.6e-15 Score=132.02 Aligned_cols=203 Identities=13% Similarity=0.059 Sum_probs=125.3
Q ss_pred ccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccccCcccchhhhhhHHHHhhhccchHHHHHHHHHhhhhhh
Q 017535 9 IPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGVTGSFP 88 (370)
Q Consensus 9 ~~gWr~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (370)
..+||.++++..++.++..++.+++.++++.. +...++.+.++|+|..|.+.+..++.+..
T Consensus 207 ~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~~-------------------~~~~~~~~~vlk~~~~Wllslly~~tFG~ 267 (462)
T PRK15034 207 VMSLANAAWIWVPLLAIATIAAWSGMNDIASS-------------------RASIADQLPVLQRLHLWLLSLLYLATFGS 267 (462)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCCcccc-------------------ccCHHHHHHHhCCCchhHHHHHHHHHHHH
Confidence 45699999898888887777777665553221 11234556789999966665555555555
Q ss_pred HHHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCC
Q 017535 89 WSAL-SFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPD 167 (370)
Q Consensus 89 ~~~~-~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (370)
|..+ .++|.|++. .++.........+..+...++++++|+++||+|+++. ..++.+...+.....+...+.
T Consensus 268 fvg~s~~lp~~~~~-~~~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~v-------l~~~~i~~~i~~~~~~l~lp~ 339 (462)
T PRK15034 268 FIGFSAGFAMLAKT-QFPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRV-------TLINFIFMAIFSALLFLTLPG 339 (462)
T ss_pred HHHHHHHHHHHHHH-HcChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHH-------HHHHHHHHHHHHHHHHHHhcc
Confidence 4444 589999833 2333333333334467788899999999999999876 333333232222222222332
Q ss_pred CC-ChhHHHHHHHHHHHHHHHhcCCCCccchhccccCC---------------------CchhHHHHHHHHHHHHhhchh
Q 017535 168 DP-STPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPE---------------------KSRTSVYAMDRSFESILSSFA 225 (370)
Q Consensus 168 ~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---------------------~~~g~~~~~~~~~~~~~~~~~ 225 (370)
.. ...+...+.++.+.++.|.... .++-++...+|+ ++.|.+.|+.+..+.+|+++-
T Consensus 340 ~~~~~~~~~~~~~~~l~~~~G~gng-svfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~ 418 (462)
T PRK15034 340 TGSGNFIAFYAVFMGLFLTAGLGSG-STFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFI 418 (462)
T ss_pred ccccHHHHHHHHHHHHHHHhcccch-HHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchh
Confidence 21 2233333333333333333333 445556666653 258899999999999999999
Q ss_pred hHHHHHHHHhhcCC
Q 017535 226 PPVVGILAQHVYGF 239 (370)
Q Consensus 226 ~~~~g~l~~~~~g~ 239 (370)
|.+.|...+..+++
T Consensus 419 p~~~g~~~~~~g~~ 432 (462)
T PRK15034 419 PQAFGMSLNMTGSP 432 (462)
T ss_pred hHHHHHHHHHcCCc
Confidence 99999999888553
No 47
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.69 E-value=6.6e-15 Score=131.68 Aligned_cols=207 Identities=13% Similarity=0.165 Sum_probs=120.0
Q ss_pred ccccccccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccccCcccchhhhhhHHHHhhhccchHHHHHHHHH
Q 017535 3 PMTFMGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQG 82 (370)
Q Consensus 3 g~~~~~~~gWr~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (370)
++.+.+.+|||++|++.+++.++..+..++..|++++++ + . ...+.+ +.+|++..+......
T Consensus 147 ~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~lp~~~~~~--~--~-------------~~~~~~-~~~~~~~~~~~~~~~ 208 (382)
T PRK10091 147 GTYLSQEFSWRYTFLLIAVFNIAVLASIYFWVPDIRDEA--K--G-------------GLREQF-HFLRSPAPWLIFAAT 208 (382)
T ss_pred HHHHhhhccHHHHHHHHHHHHHHHHHHHHHhCCCCCccc--c--c-------------CHHHHH-HHhcChHHHHHHHHH
Confidence 345667789999999999887776666656666642211 0 0 001111 345666655443333
Q ss_pred hhhh-hhHHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHH
Q 017535 83 VTGS-FPWSALSFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAAL 160 (370)
Q Consensus 83 ~~~~-~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (370)
.+.. ..+...++.+.++ +.+|+++.+.+++.+...++.+++.++.|++.||+++|+. ...+..+.......
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~-------~~~~~~~~~i~~~~ 281 (382)
T PRK10091 209 MFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRI-------AAVTDFIIVLALLM 281 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhH-------HHHHHHHHHHHHHH
Confidence 3322 2233446667777 6789999999999999999999999999999999998865 22222222111111
Q ss_pred HHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhhcCCC
Q 017535 161 LLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYGFK 240 (370)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~~g~~ 240 (370)
... ... .. +...+..++.+++.....++.......+..+++..+.+ ..+...++|.++||.+.|++.|..++|.
T Consensus 282 ~~~-~~~-~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~~~~~ 355 (382)
T PRK10091 282 LFF-FGG-MK--TASLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTLGLAYN 355 (382)
T ss_pred HHH-HHh-hH--HHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHcccCcc
Confidence 111 111 11 12222223333332222220222233343444444444 3467788999999999999999765654
No 48
>PRK15075 citrate-proton symporter; Provisional
Probab=99.68 E-value=4.1e-15 Score=135.27 Aligned_cols=140 Identities=15% Similarity=0.126 Sum_probs=92.6
Q ss_pred hHHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCC
Q 017535 88 PWSALSFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLP 166 (370)
Q Consensus 88 ~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (370)
.+....|.|.|+ +.+|++..+.+++..+..++.+++.+++|+++||++||+. ...+..+........+....
T Consensus 254 ~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~-------~~~~~~~~~~~~~~~~~~~~ 326 (434)
T PRK15075 254 FYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPV-------LIAFTVLAILTAYPALSWLV 326 (434)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHH-------HHHHHHHHHHHHHHHHHHHH
Confidence 345557899999 5689999999988888889999999999999999998865 22221111111111111111
Q ss_pred CCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHH-hhchhhHHHHHHHHhh
Q 017535 167 DDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESI-LSSFAPPVVGILAQHV 236 (370)
Q Consensus 167 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~g~l~~~~ 236 (370)
..+. ........++.+++.+...+ ..+.+..|.+|++.|+++.++.+.+... ++.++|.+.|++.|..
T Consensus 327 ~~~~-~~~~~~~~~~~~~~~g~~~~-~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~ 395 (434)
T PRK15075 327 AAPS-FARMLAVELWLSFLYGSYNG-AMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVT 395 (434)
T ss_pred cCCc-hHHHHHHHHHHHHHHHHHHh-hHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhc
Confidence 1122 21122223333444444444 4567788999999999999997655554 5888999999999987
No 49
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.68 E-value=1.9e-15 Score=139.80 Aligned_cols=225 Identities=12% Similarity=0.085 Sum_probs=142.1
Q ss_pred CccccccccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCc----------------cccCcccchhh------
Q 017535 2 APMTFMGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSD----------------QVSSKSFRSDV------ 59 (370)
Q Consensus 2 ~g~~~~~~~gWr~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~------ 59 (370)
+++++.+++|||+.|++.++++++..++.++..|++++....+.+.. ...+...+...
T Consensus 145 ~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (485)
T TIGR00711 145 LGGWIIENYHWRWIFLINVPIGIIVVVVAFFILPRDKPAASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILIL 224 (485)
T ss_pred cHhHhccCcCceehhhhhhHHHHHHHHHHHHHcCCccccccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHH
Confidence 35667788999999999988887777766666665332211110000 00000000000
Q ss_pred ------------------hhhHHHHhhhccchHHHHHHHH-HhhhhhhHHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHH
Q 017535 60 ------------------KVLIQEAKSVIKIPSFQIIVAQ-GVTGSFPWSALSFAAMWL-ELTGFSHEKTAFLMALFVIA 119 (370)
Q Consensus 60 ------------------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~ 119 (370)
++... -.+++++|.++..... ++.....+....++|.|+ +.+|+++.+++++..+..++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~ 303 (485)
T TIGR00711 225 SITGLVAIIAFVVWELTDDNPLV-DLRLFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLA 303 (485)
T ss_pred HHHHHHHHHHHHHHHHcCCCCcc-CHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 00000 1246778875554443 333444455567889999 67899999999999999999
Q ss_pred HHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhc
Q 017535 120 SSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFA 199 (370)
Q Consensus 120 ~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 199 (370)
.+++.++.|++.||+++|+. ..++..+............... ...+......++.|++.+...+ .......
T Consensus 304 ~~~~~~~~g~l~~r~~~~~~-------~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~g~g~~~~~~-~~~~~~~ 374 (485)
T TIGR00711 304 PMLSSPIAGRMGDKIDPRKL-------VTIGLILYAVGFYWRAFTFTPD-TPFLAIALPQFIRGFGMGCFFM-PLTTIAL 374 (485)
T ss_pred HHHHHHHHHHHHhhcCcHHH-------HHHHHHHHHHHHHHHhccCCCC-CCHHHHHHHHHHHHHHHHHHHH-HHHHHHH
Confidence 99999999999999998864 2333222221111111111122 2233344445666776666554 4456666
Q ss_pred cccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 200 EIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 200 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
+..|++++|+++|+.++.+++|+.+|+.+.|.+.+..
T Consensus 375 ~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~~~ 411 (485)
T TIGR00711 375 SGLPPHKIARGSSLSNFTRQLGGSIGTALITTILTNR 411 (485)
T ss_pred hcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7789999999999999999999999999999998754
No 50
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.67 E-value=1.8e-14 Score=129.26 Aligned_cols=202 Identities=11% Similarity=0.106 Sum_probs=128.0
Q ss_pred ccccccccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccccCcccchhhhhhHHHHhhhccchHHHHHHHHH
Q 017535 3 PMTFMGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQG 82 (370)
Q Consensus 3 g~~~~~~~gWr~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (370)
++.+.+.+|||+.|++.+++++++.+......||++.++ + ...+..++.+|+|.++......
T Consensus 164 ~~~l~~~~gw~~~f~~~~~l~~~~~l~~~~~~p~~~~~~--~----------------~~~~~~~~~l~~~~~~~~~~~~ 225 (394)
T PRK10213 164 GSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSLPGEP--S----------------HQKQNTFRLLQRPGVMAGMIAI 225 (394)
T ss_pred HHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHCCCCCccc--c----------------cchhHHHHHhcCHHHHHHHHHH
Confidence 456677889999999988877765554444445432110 0 0011234677888866554433
Q ss_pred -hhhhhhHHHHHHH-HHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHH
Q 017535 83 -VTGSFPWSALSFA-AMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAAL 160 (370)
Q Consensus 83 -~~~~~~~~~~~~~-~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (370)
+.....+...++. |.|.+++|+++.+.+.+....+++.+++.++.+++.||.+++ . ......+.......
T Consensus 226 ~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~~-~-------l~~~~~~~~~~~~~ 297 (394)
T PRK10213 226 FMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVKL-A-------LAGAPLVLAVSALV 297 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccchh-H-------HHHHHHHHHHHHHH
Confidence 3333334445665 555588899999999999999999999999999999984333 1 12221221111111
Q ss_pred HHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 161 LLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
... ... . .+.+.+..++.|++.+...+ ...+.+.+..| +..+...++.....+++..+|+.+.|++.|..
T Consensus 298 l~~-~~~--~-~~~~~~~~~l~G~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~ 367 (394)
T PRK10213 298 LTL-WGS--D-KIVATGVAIIWGLTFALVPV-GWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALDNI 367 (394)
T ss_pred HHH-Hhh--h-HHHHHHHHHHHHHHHHhhhH-HHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 111 111 1 23344456666777666665 56667777776 44778888888888999999999999999976
No 51
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.67 E-value=7.4e-15 Score=132.70 Aligned_cols=206 Identities=11% Similarity=0.143 Sum_probs=127.8
Q ss_pred cccccccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccccCcccchhhhhhHHHHhhhccchHHHH-HHHHH
Q 017535 4 MTFMGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQI-IVAQG 82 (370)
Q Consensus 4 ~~~~~~~gWr~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 82 (370)
+.+.+.+|||+.|++.+++.++..+..+++.|++..+...+ + ....++..+.++++.++. .+...
T Consensus 163 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-----------~~~~~~~~~~~~~~~~~~~~~~~~ 228 (408)
T PRK09874 163 GLLADSYGLRPVFFITASVLFLCFLVTLFCIRENFQPVSKK---E-----------MLHMREVVTSLKNPKLVLSLFVTT 228 (408)
T ss_pred HHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhccCcccccch---h-----------hhHHHHHHHhCcCCchHHHHHHHH
Confidence 44556789999999999888777776666667643211100 0 111122334567776433 22222
Q ss_pred hhhhhhH-HHHHHHHHHHHHhCCCHH----HHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHH
Q 017535 83 VTGSFPW-SALSFAAMWLELTGFSHE----KTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPL 157 (370)
Q Consensus 83 ~~~~~~~-~~~~~~~~~~~~~g~s~~----~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~ 157 (370)
+...... ....+++.|..+.+.+.. ..+.+..+..++.+++.++.|++.||+++|+. ...+..+....
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~-------~~~~~~~~~~~ 301 (408)
T PRK09874 229 LIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKI-------LITALIFSVLL 301 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchh-------HHHHHHHHHHH
Confidence 2222222 233567777744333322 24555566678888899999999999998865 23322222211
Q ss_pred HHHHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 158 AALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
.+.+. ... . .+.+.+..++.|++.+...+ ...+.+.+..|++.+|+.+++.+.+..+|..+||.+.|.+.+..
T Consensus 302 -~~~~~-~~~--~-~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~ 374 (408)
T PRK09874 302 -LIPMS-FVQ--T-PLQLGILRFLLGAADGALLP-AVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANY 374 (408)
T ss_pred -HHHHH-Hhc--c-HHHHHHHHHHHHhhhHhhHH-HHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhc
Confidence 11111 111 1 23344555667777766666 56677778888899999999999999999999999999998876
No 52
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.67 E-value=2.3e-14 Score=130.09 Aligned_cols=207 Identities=16% Similarity=0.263 Sum_probs=148.1
Q ss_pred CchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccccCcccchhhhhhHHHHhhhccchHHHHHHHHHhhhhhhHH
Q 017535 11 GWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGVTGSFPWS 90 (370)
Q Consensus 11 gWr~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (370)
+|++..++.+++.++..++..+..||.+.....++ ++ .+.++.++.+++||.++.++...++....+.
T Consensus 175 ~~~~~~~v~~iv~~v~~~i~~~~~ke~~~~~~~~~-----~~-------~~~~~~~~~~~~nr~~~~l~~~~~~~~~~~~ 242 (428)
T PF13347_consen 175 GYRWMALVLAIVGLVFFLITFFFVKERSVEVTEQE-----KK-------ISLRDSLRSLFRNRPFRILLLAFFLQWLAFA 242 (428)
T ss_pred HHHHHHHHHHHHHHHHhhhhhheeeeccccccccc-----cc-------cccccchhhhcccchHHHHHHHHHHHHhhhh
Confidence 79999999999999988888888888211111110 00 3345567789999998877776666666655
Q ss_pred HH-HHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCC
Q 017535 91 AL-SFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDD 168 (370)
Q Consensus 91 ~~-~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (370)
.. ...+.|. ...|.+ ...+.+.....++.+++.++.++++||+|+|+. ...+..+.........+ .+.
T Consensus 243 ~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~-------~~~~~~~~~~~~~~~~~-~~~- 312 (428)
T PF13347_consen 243 LMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKV-------YIIGLLLAALGFLLLFF-LGP- 312 (428)
T ss_pred hhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceee-------hhhhHHHHHHHHHHHHH-HHh-
Confidence 44 4556666 445655 567777778899999999999999999999987 34443333332222222 221
Q ss_pred CChhHHHHHHHHHHHHHHHhcCCCCccchhccccC-------CCchhHHHHHHHHHHHHhhchhhHHHHHHHHhhcCCCC
Q 017535 169 PSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVP-------EKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYGFKP 241 (370)
Q Consensus 169 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~~g~~~ 241 (370)
.+.+.+.+..++.|++.+.... ..+++++|..+ ++..|..+|+.++...++.++++.+.|.+.+.. ||++
T Consensus 313 -~~~~~~~i~~~l~gi~~~~~~~-~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~-Gy~~ 389 (428)
T PF13347_consen 313 -GSPWLVLILFILAGIGYGAFFV-IPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALV-GYDA 389 (428)
T ss_pred -hhHHHHHHHHHHhHhhhccccc-ccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHh-CcCC
Confidence 2344566677777887777776 77999999876 355799999999999999999999999999988 8876
Q ss_pred C
Q 017535 242 I 242 (370)
Q Consensus 242 ~ 242 (370)
.
T Consensus 390 ~ 390 (428)
T PF13347_consen 390 N 390 (428)
T ss_pred C
Confidence 5
No 53
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.67 E-value=1.9e-15 Score=135.72 Aligned_cols=207 Identities=15% Similarity=0.185 Sum_probs=126.6
Q ss_pred cccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccccCcccchhhhhhHHHHhhhccchH--HHHHHHHHhhh
Q 017535 8 GIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPS--FQIIVAQGVTG 85 (370)
Q Consensus 8 ~~~gWr~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 85 (370)
+.+|||++|++.+++.++... .....+|+++.+..+++.+ . ..++.++.++++. ++......+..
T Consensus 165 ~~~~w~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (394)
T TIGR00883 165 LEWGWRIPFLVSAVLVLIGLY-LRRNLEETPVFEKAQEKHK-K-----------KRGPIRETLTKHRKPFLLGLGLVIAT 231 (394)
T ss_pred hccchHHHHHHHHHHHHHHHH-HHHhcCCChhHHHHHhccc-c-----------ccCCHHHHHHhchHHHHHHHHHHHHH
Confidence 467999999987766554433 3333344221111100000 0 0111223444443 44443333333
Q ss_pred h-hhHHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHH
Q 017535 86 S-FPWSALSFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLL 163 (370)
Q Consensus 86 ~-~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (370)
. ..+....++|.|+ +.+|.+..+.+.+.....++.+++.++.|+++||+++|+. ......+........+.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~-------~~~~~~~~~~~~~~~~~ 304 (394)
T TIGR00883 232 TTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPV-------LIIFTVLAALLAVPLLM 304 (394)
T ss_pred HHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHH-------HHHHHHHHHHHHHHHHH
Confidence 3 3344557899999 7889999999999999999999999999999999998864 22121111111111111
Q ss_pred hCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHH-HHHHHHhhchhhHHHHHHHHhh
Q 017535 164 VLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMD-RSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
...... ..+......++.+++.+...+ ...+++.|.+|++.|+++.++. +....+++.++|.+.|++.+..
T Consensus 305 ~~~~~~-~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~ 376 (394)
T TIGR00883 305 ALLDSG-SFTLFFFLVLGLALIGGMYTG-PMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMT 376 (394)
T ss_pred HHhcCC-chHHHHHHHHHHHHHHHHHhh-hHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHc
Confidence 111111 223344445566666666666 6788999999999999999985 4555678889999999999987
No 54
>PRK11043 putative transporter; Provisional
Probab=99.67 E-value=8e-15 Score=132.15 Aligned_cols=207 Identities=14% Similarity=0.030 Sum_probs=129.8
Q ss_pred ccccccccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccccCcccchhhhhhHHHHhhhccchHHHHHHHH-
Q 017535 3 PMTFMGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQ- 81 (370)
Q Consensus 3 g~~~~~~~gWr~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 81 (370)
++++.+.+|||+.|++.+++.++..++.++..+++++++ + ++...++++++|+|.++.....
T Consensus 150 ~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---------------~~~~~~~~~~~~~~~~~~~~~~~ 212 (401)
T PRK11043 150 GAWLLNHFGWQAIFATLFAITLLLILPTLRLKPSKKARK--Q---------------SQDALTFKQLLKSKTYLGNVLIF 212 (401)
T ss_pred HHHHHhcCChHHHHHHHHHHHHHHHHHHHHcCCCCCccc--c---------------chHHHHHHHHHcChhHHHHHHHH
Confidence 455667889999999998888776665554433322111 0 1112345677888886543332
Q ss_pred HhhhhhhHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHH
Q 017535 82 GVTGSFPWSALSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALL 161 (370)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (370)
.+.....+...++.|.+++++|+++.+.++......++.++|.++.+++.||+++|+.. +...+...++.... ..
T Consensus 213 ~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~----~~~~~~~~~~~~~~-~~ 287 (401)
T PRK11043 213 AACSAAFFAWLTGSPFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLL----PWLLVLFAVSVIAI-WL 287 (401)
T ss_pred HHHHHHHHHHHHHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHH----HHHHHHHHHHHHHH-HH
Confidence 23333334455778888877899999999988878888899999999999999877541 11111111111111 11
Q ss_pred HHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHh
Q 017535 162 LLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQH 235 (370)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~ 235 (370)
.. ....+. .+...+.....+++.+...+ ...+...+..| +.+|++.|+.+.....++.+++.+.|.+.+.
T Consensus 288 ~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~ 357 (401)
T PRK11043 288 AS-LLSHPS-LVPLLIPFCVMAAANGAIYP-IVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLVSALIST 357 (401)
T ss_pred HH-HhccCc-HHHHHHHHHHHHHHHHHHHH-HHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 11 111122 22333444555666666666 55555556555 5699999999999998999999999888764
No 55
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.67 E-value=2.1e-14 Score=129.32 Aligned_cols=207 Identities=14% Similarity=0.167 Sum_probs=117.1
Q ss_pred cccc-cCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccccCcccchhhhhhHHHHhhhccchHHHHHHHHHhh
Q 017535 6 FMGI-PGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGVT 84 (370)
Q Consensus 6 ~~~~-~gWr~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (370)
+.+. +|||..|++.+++.++..+. .+..|||+..+..+ + . .. ++..+++++++|||.++.++...++
T Consensus 153 l~~~~~gw~~~f~i~a~~~l~~~l~-~~~~~e~~~~~~~~--~--~----~~---~~~~~~~~~l~~~~~~~~~l~~~~l 220 (402)
T PRK11902 153 LADRVLGWGNTYLLMAGLMLAGALT-TLWAPEPEVPARPP--R--S----LG---EAVVGPLRDFFSRRGAWALLLLIVL 220 (402)
T ss_pred HHhcccCHHHHHHHHHHHHHHHHHH-HHhcCCCccccccc--c--h----hH---HHHHHHHHHHHhCcCHHHHHHHHHH
Confidence 3443 59999999988877665443 34556654321111 0 0 00 2344567788999987655444333
Q ss_pred hhhh-HHHHHHHHHHH-HHhCCCHHHHHHHHHHHH-HHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHH-HHH
Q 017535 85 GSFP-WSALSFAAMWL-ELTGFSHEKTAFLMALFV-IASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPL-AAL 160 (370)
Q Consensus 85 ~~~~-~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~-~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 160 (370)
.... .....+.+.++ +.+|+++.+.+++....+ ++.+++.+++|++.||+++|+. ..++..+.... ...
T Consensus 221 ~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~-------l~~~~~~~~l~~l~~ 293 (402)
T PRK11902 221 YKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRS-------LMLFGVLQAVSNLGY 293 (402)
T ss_pred HHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHH-------HHHHHHHHHHHHHHH
Confidence 2222 22223445556 779999999999886654 4688999999999999998864 22222221111 111
Q ss_pred HHHhCCCCCChhHHHHHHH----HHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 161 LLLVLPDDPSTPVMHGLVL----VVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
........+ .+.+.... +..|+..+.... ....++.+..| ++..++.+....++..+++.+.|.+.|..
T Consensus 294 ~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~~~~l~~~~~~~~~G~l~~~~ 366 (402)
T PRK11902 294 WVLAVTPKH--LWTMALAIGIENLCGGMGTAAFVA-LLMALCNRSFS----ATQYALLSALASVGRVYVGPTSGYLVEAY 366 (402)
T ss_pred HHHHhcCCc--HHHHHHHHHHHHHHHHHHHHHHHH-HHHHhcCCCCc----HHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 111121111 22222222 233344433333 33444455444 44566666666777776777899999987
Q ss_pred cCC
Q 017535 237 YGF 239 (370)
Q Consensus 237 ~g~ 239 (370)
||
T Consensus 367 -G~ 368 (402)
T PRK11902 367 -GW 368 (402)
T ss_pred -Ch
Confidence 53
No 56
>PRK09848 glucuronide transporter; Provisional
Probab=99.67 E-value=2.1e-14 Score=131.15 Aligned_cols=168 Identities=8% Similarity=-0.000 Sum_probs=110.7
Q ss_pred hHHHHhhhccchHHHHHHHHHhhhhhhHHHH-HHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCC
Q 017535 62 LIQEAKSVIKIPSFQIIVAQGVTGSFPWSAL-SFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFP 139 (370)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~ 139 (370)
..+.++.++|||.++...+..++....+... .+.|.|+ ..+|.++...++......++.+++.++.+++.||+++|+.
T Consensus 217 ~~~~~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~ 296 (448)
T PRK09848 217 LKISLQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNT 296 (448)
T ss_pred HHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHH
Confidence 3445678999999877666555555443333 4566666 5678776655555555567788899999999999998865
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCC-------CchhHHHH
Q 017535 140 NSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPE-------KSRTSVYA 212 (370)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-------~~~g~~~~ 212 (370)
..++..+..... +.+...+. ...+.+.+..++.+++.+...+ ...++..+..|. +..|..+|
T Consensus 297 -------~~~g~~~~~i~~-~~~~~~~~--~~~~~~~~~~~l~g~G~~~~~~-~~~al~~~~~~~~~~~~g~r~~G~~~~ 365 (448)
T PRK09848 297 -------FLIGALLGTCGY-LLFFWVSV--WSLPVALVALAIASIGQGVTMT-VMWALEADTVEYGEYLTGVRIEGLTYS 365 (448)
T ss_pred -------HHHHHHHHHHHH-HHHHHcCc--hhHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhhhhhHHhhCccchhHHHH
Confidence 333333322221 22221221 1233344445556666665555 667777777764 34699999
Q ss_pred HHHHHHHHhhchhhHHHHHHHHhhcCCCC
Q 017535 213 MDRSFESILSSFAPPVVGILAQHVYGFKP 241 (370)
Q Consensus 213 ~~~~~~~~~~~~~~~~~g~l~~~~~g~~~ 241 (370)
+.++...+|.++++.+.|.+.+.. ||+.
T Consensus 366 ~~~~~~klg~aig~~i~g~~l~~~-G~~~ 393 (448)
T PRK09848 366 LFSFTRKCGQAIGGSIPAFILGLS-GYIA 393 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHc-CCCC
Confidence 999999999999999999999987 7763
No 57
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.65 E-value=5.1e-15 Score=137.27 Aligned_cols=135 Identities=16% Similarity=0.212 Sum_probs=95.1
Q ss_pred HHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCC
Q 017535 91 ALSFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDP 169 (370)
Q Consensus 91 ~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (370)
...++|.|+ +.+|++..+.+.+.+...++.+++.++.|+++||+++|+. ..++..+..... +.+.... .
T Consensus 294 ~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~-------~~~~~~~~~~~~-~~~~~~~--~ 363 (496)
T PRK03893 294 IQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKA-------YVCSLLISQLLI-IPVFAIG--G 363 (496)
T ss_pred HHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHH-------HHHHHHHHHHHH-HHHhhcc--c
Confidence 346789999 6899999999999999999999999999999999998865 222222222111 1111111 1
Q ss_pred ChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 170 STPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 170 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
...+.+....++.++......+ ...+++.+.+|++.+|+++|+.+....+|+.++|.+.|.+.|..
T Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~ 429 (496)
T PRK03893 364 ANVWVLGLLLFFQQMLGQGISG-LLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRL 429 (496)
T ss_pred cHHHHHHHHHHHHHHHhcccch-hhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccC
Confidence 2222233333333332222233 55677889999999999999999999999999999999999986
No 58
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.65 E-value=3e-14 Score=128.51 Aligned_cols=212 Identities=14% Similarity=0.058 Sum_probs=124.6
Q ss_pred ccccccccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccccCcccchhhhhhHHHHhhhccchHHHHHHHHH
Q 017535 3 PMTFMGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQG 82 (370)
Q Consensus 3 g~~~~~~~gWr~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (370)
|+.+.+++|||+.|++.++++++..+..++..||++..+.. + .. .+..+++++.++|||.++...+..
T Consensus 160 g~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp~~~~~~~~---~--~~-------~~~~~~~~~~ll~~~~~~~~~l~~ 227 (413)
T PRK15403 160 GAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMPETVKRGAV---P--FS-------AKSVLRDFRNVFRNRLFLTGAATL 227 (413)
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCCccccCC---C--CC-------hHHHHHHHHHHHcCHHHHHHHHHH
Confidence 45566678999999999988877766555556664221100 0 00 134456778899999977665554
Q ss_pred hhhhhh-HHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHH
Q 017535 83 VTGSFP-WSALSFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAAL 160 (370)
Q Consensus 83 ~~~~~~-~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (370)
.+.... +....+.|.++ +.+|+++.+.++.......+.+++..+.+++.++..+++. ..........+......
T Consensus 228 ~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~----~~~~~~~~~ig~~l~~~ 303 (413)
T PRK15403 228 SLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRF----IWRAVPIQLVGLALLIV 303 (413)
T ss_pred HHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhH----HHHHHHHHHHHHHHHHH
Confidence 444433 44446779888 6679999999998877778888877777766543332222 00000011111111111
Q ss_pred HHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHh
Q 017535 161 LLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQH 235 (370)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~ 235 (370)
..... ...++...+..++.+++.+...| ........ -.+..+|++.|+.++....+..+++...|++.+.
T Consensus 304 ~~~~~---~~~~~~~~~~~~l~~~G~~~~~p-~~~~~al~-~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~ 373 (413)
T PRK15403 304 GNLLW---PHVWLWSVLGTSLYAFGIGLIFP-TLFRFTLF-SNNLPKGTVSASLNMVILMVMAVSVEIGRWLWFN 373 (413)
T ss_pred HHHHc---cccHHHHHHHHHHHHHHHHHHhH-HHHHHHhc-cCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 11111 11122233444555565555555 33322211 1223479999999999999999999999887765
No 59
>TIGR00895 2A0115 benzoate transport.
Probab=99.65 E-value=2.4e-15 Score=135.34 Aligned_cols=217 Identities=16% Similarity=0.132 Sum_probs=131.0
Q ss_pred ccccccccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCC-CCC----------------c-c-ccCcccchhhhhhH
Q 017535 3 PMTFMGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGT-ANS----------------D-Q-VSSKSFRSDVKVLI 63 (370)
Q Consensus 3 g~~~~~~~gWr~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~----------------~-~-~~~~~~~~~~~~~~ 63 (370)
++.+.+..|||+.|++.+++.++..++.+++.|++++....+ .++ . . ...+...+..+...
T Consensus 161 ~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (398)
T TIGR00895 161 AGWLIPVFGWRSLFYVGGIAPLLLLLLLMRFLPESIDFLVSKRPETVRRIVNAIAPQMQAEAQSALPEQKATQGTKRSVF 240 (398)
T ss_pred HHHHhhcccceeehhhhhhHHHHHHHHHHHhCCCCChHHHhcCHHHHHHHHHHHHHhccccccccccccccccchhhHHH
Confidence 345667789999999988777776666666667643210000 000 0 0 00000000001111
Q ss_pred HHHhhhccchHHHHHHH-HHhhhhhhHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCch
Q 017535 64 QEAKSVIKIPSFQIIVA-QGVTGSFPWSALSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSG 142 (370)
Q Consensus 64 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~ 142 (370)
+.+++..+.+..+.+.. .++.....+....|.|.+.+++|+++.+.+.+.....++.+++.++.|+++||+++|+.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--- 317 (398)
T TIGR00895 241 KALFQGKTARITVLLWLLYFMLLVGVYFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVT--- 317 (398)
T ss_pred HHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHH---
Confidence 11111111222222222 22222333444467885558899999999999999999999999999999999988722
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhh
Q 017535 143 RIILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILS 222 (370)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 222 (370)
.....+........... . .. .....+..++.|++.+...+ ...+++.+.+|++.|+++.|+.+.+..+++
T Consensus 318 -----~~~~~~~~~~~~~~~~~-~--~~-~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~ 387 (398)
T TIGR00895 318 -----ALLLLLGAVFAVLVGST-L--FS-PTLLLLLGAIAGFFVNGGQS-GLYALMALFYPTAIRATGVGWAIGIGRLGA 387 (398)
T ss_pred -----HHHHHHHHHHHHHHHHH-h--hC-HHHHHHHHHHHHHHHHHHHH-HHHHHHhhcCCHHHHHHHHHHHHHHHHHHH
Confidence 22212221111111111 1 11 22344555667777666666 778899999999999999999999999999
Q ss_pred chhhHHHHHH
Q 017535 223 SFAPPVVGIL 232 (370)
Q Consensus 223 ~~~~~~~g~l 232 (370)
.++|.+.|++
T Consensus 388 ~~g~~~~G~l 397 (398)
T TIGR00895 388 IIGPILAGYL 397 (398)
T ss_pred HHHHHhHHhc
Confidence 9999999875
No 60
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.65 E-value=3.8e-14 Score=127.37 Aligned_cols=207 Identities=9% Similarity=-0.028 Sum_probs=124.7
Q ss_pred ccccccccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccccCcccchhhhhhHHHHhhhccchHHHHHHHHH
Q 017535 3 PMTFMGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQG 82 (370)
Q Consensus 3 g~~~~~~~gWr~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (370)
++++. .+|||+.|++.+++.++..++..++.|+++.++ . . .+..+++++++++|.++......
T Consensus 155 ~g~l~-~~g~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~--~---~-----------~~~~~~~~~~~~~~~~~~~~~~~ 217 (400)
T PRK11646 155 GSWLL-QYDFRLVCATGAVLFVLAAAFNAWLLPAYKLST--V---R-----------TPVREGMTRVLRDKRFVTYVLTL 217 (400)
T ss_pred HHHHH-HhhHHHHHHHHHHHHHHHHHHHHHhCCcccccc--c---c-----------hhhHHHHHHHHcCchHHHHHHHH
Confidence 34455 679999999988877776655555555422110 0 0 11223456778888865543332
Q ss_pred hhhh-hhHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHH-HhhhCCCchhHHHHHHHHHHHHHHHHH
Q 017535 83 VTGS-FPWSALSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDF-LSARFPNSGRIILAQISSLSAIPLAAL 160 (370)
Q Consensus 83 ~~~~-~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (370)
.... .......++|.|+++.+.++.+.+.+.+...++..++....+++.|| ++.++. ...+..+.. ....
T Consensus 218 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~-------~~~~~~~~~-~~~~ 289 (400)
T PRK11646 218 TGYYMLAVQVMLMLPIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHR-------LMAGLLIMS-LSMF 289 (400)
T ss_pred HHHHHHHHHHHHhhhhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHH-------HHHHHHHHH-HHHH
Confidence 2222 22233467888886655577888888877776666555555555554 433321 122222221 1111
Q ss_pred HHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhhcCC
Q 017535 161 LLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYGF 239 (370)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~~g~ 239 (370)
.+. ..+ . .+.+.+..+..+.+.+...| ...+++.+..|++++|++.|+.++..++|..+||.+.|++.|..+++
T Consensus 290 ~l~-~~~--~-~~~~~~~~~l~~~g~~~~~p-~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~ 363 (400)
T PRK11646 290 PIG-MVS--N-LQQLFTLICLFYIGSIIAEP-ARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKAL 363 (400)
T ss_pred HHH-Hhh--h-HHHHHHHHHHHHHHHHHHHc-cHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhc
Confidence 111 111 1 22233333445555555566 66788889999999999999999999999999999999999987443
No 61
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.65 E-value=1.9e-14 Score=120.50 Aligned_cols=201 Identities=14% Similarity=0.140 Sum_probs=134.8
Q ss_pred cCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccccCcccchhhhhhHHHHhhhccchHHHHHHHHH-hhhhhh
Q 017535 10 PGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQG-VTGSFP 88 (370)
Q Consensus 10 ~gWr~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 88 (370)
.|||....+-++++++..+.++.-...++ ....+ . ....-..++|+|.-|.+.+++ +.+...
T Consensus 162 ~gW~~aL~~WAl~allAl~~WlPq~~r~~-~~~~~--~--------------~~~~~~~vw~~~~aW~vtLfmGlqS~~~ 224 (395)
T COG2807 162 GGWRGALGFWALLALLALLIWLPQALREQ-AASIA--T--------------KLVSVRKVWRSPLAWQVTLFMGLQSLLY 224 (395)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhhhccccc-ccccc--c--------------ccccccccccCchhHHHHHHHHhhHHHH
Confidence 37999999999988876665543321110 11100 0 000112589999855555544 555556
Q ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCC
Q 017535 89 WSALSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDD 168 (370)
Q Consensus 89 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (370)
|..+.|+|.++.+.|+|+.++|.+.+...+..+..++....+.+|...++. ..+...++.......+...+..
T Consensus 225 Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~-------~~~~~~~~~l~G~~G~~~~P~~ 297 (395)
T COG2807 225 YIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRP-------LVVLALLLMLVGLVGLLLAPGQ 297 (395)
T ss_pred HHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccch-------HHHHHHHHHHHHHHHHHHhhhh
Confidence 778899999999999999999999999999999999999999999655554 2222222222333333333333
Q ss_pred CChhHHHHHHHHHHHHHHHhcCCCCccchhccc-cCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhhcCCC
Q 017535 169 PSTPVMHGLVLVVTGLFISWNAPATNNPIFAEI-VPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYGFK 240 (370)
Q Consensus 169 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~~g~~ 240 (370)
.. ... .+++|++.|..+| ...+.+... .+++..+.-+|+.+.++++-.++||.+.|++.|.+|+|.
T Consensus 298 ~~---~lw--~~llG~G~G~~F~-laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~ 364 (395)
T COG2807 298 LP---ILW--ALLLGLGQGGAFP-LALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWS 364 (395)
T ss_pred HH---HHH--HHHHhCccchHHH-HHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChH
Confidence 22 122 3556666666666 445554443 456778888999999999999999999999999997754
No 62
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.64 E-value=2.9e-14 Score=127.42 Aligned_cols=203 Identities=12% Similarity=0.083 Sum_probs=116.9
Q ss_pred ccccccccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccccCcccchhhhhhHHHHhhhccchHHHHHHHHH
Q 017535 3 PMTFMGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQG 82 (370)
Q Consensus 3 g~~~~~~~gWr~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (370)
++.+.+..|||+.|++.+++.++..++..++.||+++++..+ +.+ .+...+++++++++|.++......
T Consensus 135 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-------~~~~~~~~~~~~~~~~~~~~~~~~ 203 (377)
T PRK11102 135 GGWLLVWFSWHAIFWVLALAAILAAALVFFFIPETLPKERRQ----PFH-------LRTTIRNFASLFRHKRVLGYMLAS 203 (377)
T ss_pred HHHHHHHcChHHHHHHHHHHHHHHHHHHHHhCCccCcccccC----CCC-------hHHHHHHHHHHHcChHHHHHHHHH
Confidence 345566789999999998888777766666666642211100 000 022344566788888855544433
Q ss_pred hhhhh-hHHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHH-
Q 017535 83 VTGSF-PWSALSFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAA- 159 (370)
Q Consensus 83 ~~~~~-~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~- 159 (370)
.+... .+....+.|.++ +.+|+++.+.+.+.....++.+++.++.|++.||+++|+. ..++..+......
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~-------~~~~~~~~~~~~~~ 276 (377)
T PRK11102 204 GFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNM-------LRFGLWIQFIMGIW 276 (377)
T ss_pred HHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHH-------HHHHHHHHHHHHHH
Confidence 33322 344446677777 7789999999999999999999999999999999998865 2222221111111
Q ss_pred HHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHH-HhhchhhH
Q 017535 160 LLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFES-ILSSFAPP 227 (370)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~ 227 (370)
........ .. .+...+.....+.+.+...+ .....+.+..| +.+|++.++.+.... ++..+++.
T Consensus 277 ~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~ 341 (377)
T PRK11102 277 LVVSALLD-LG-FWALVVGVAAFVGCVSMISS-NAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGAL 341 (377)
T ss_pred HHHHHHHh-hh-HHHHHHHHHHHHHHHHHhhH-HHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHH
Confidence 11111111 11 22222222222222333233 33455566555 679999998877654 33344443
No 63
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.64 E-value=4.1e-14 Score=127.23 Aligned_cols=214 Identities=8% Similarity=0.033 Sum_probs=129.2
Q ss_pred cccccccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccccCcccchhhhhhHHHHhhhccchHHHHHHHHHh
Q 017535 4 MTFMGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGV 83 (370)
Q Consensus 4 ~~~~~~~gWr~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (370)
+.+. ..+||++|++.++++++..++.+...+++++++...+..+.+.+ +...++.++++|||.++..+...+
T Consensus 154 g~l~-~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~~~~~~~~l~~~ 225 (396)
T TIGR00882 154 GILF-SIDPQIVFWLGSGFALILMLLLMFAKPKAPSSATVANALGANAS-------AFSLKLALELFRQRKFWMFVLYVV 225 (396)
T ss_pred hhhh-ccCchHHHHHHHHHHHHHHHHHHHhCCCCchhhhhhcccccccC-------CCCHHHHHHHHcCCcHHHHHHHHH
Confidence 3443 35999999999888887776665554543221111000000000 112335667889998665544444
Q ss_pred hhhhhHHHH-HHHHHHHH-Hh---CCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHH
Q 017535 84 TGSFPWSAL-SFAAMWLE-LT---GFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLA 158 (370)
Q Consensus 84 ~~~~~~~~~-~~~~~~~~-~~---g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (370)
.....+... .+.+.|++ .+ +.+....+.+.+...+...++.+..|++.||+++|+. ..++..+... .
T Consensus 226 ~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~-------l~~~~~l~~l-~ 297 (396)
T TIGR00882 226 GVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNA-------LLIAGTIMSV-R 297 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchh-------HHHHHHHHHH-H
Confidence 333333333 56778873 33 5566778888888888889999999999999999976 2333222221 1
Q ss_pred HHHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHH-HHHHHHHhhchhhHHHHHHHHhhc
Q 017535 159 ALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAM-DRSFESILSSFAPPVVGILAQHVY 237 (370)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~g~l~~~~~ 237 (370)
...+. ...+ .+.+.+..++.|++...... ....+..+..+++.++++.++ .++...+|+.+++.+.|++.|..
T Consensus 298 ~~~~~-~~~~---~~~~~~~~~l~g~~~~~~~~-~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~- 371 (396)
T TIGR00882 298 IIGSS-FATT---ALEVVILKMLHAFEVPFLLV-GCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSI- 371 (396)
T ss_pred HHHHH-hcCC---hHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhc-
Confidence 11111 2211 22234445555555443332 234455666778888887766 67889999999999999999987
Q ss_pred CC
Q 017535 238 GF 239 (370)
Q Consensus 238 g~ 239 (370)
||
T Consensus 372 G~ 373 (396)
T TIGR00882 372 GF 373 (396)
T ss_pred cc
Confidence 53
No 64
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.64 E-value=1.3e-14 Score=128.66 Aligned_cols=190 Identities=13% Similarity=0.146 Sum_probs=119.4
Q ss_pred CchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccccCcccchhhhhhHHHHhhhccchH---HHHHHHH-Hhhhh
Q 017535 11 GWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPS---FQIIVAQ-GVTGS 86 (370)
Q Consensus 11 gWr~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~ 86 (370)
+||.+|++.+++.++..+..++..|||.+.+..+ +.. .++..+.++.++++|. ++..... ++...
T Consensus 155 ~wr~~f~i~ai~~l~~~~~~~~~~~e~~~~~~~~----~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (356)
T TIGR00901 155 LWGYIFFWTALLILPGLLVTLFLAKEPQEDASVP----KPL-------TQAVLKPIREFFQRKNMIQALLLLLLIVLYKL 223 (356)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhccCCCcccccc----hhH-------HHHHHHHHHHHHHhcCchHHHHHHHHHHHHHH
Confidence 3999999998877775555555556653321110 000 0223345566777764 4444333 33333
Q ss_pred hhHHHHHHHHHHHHHhCCCHHHHHHHHHHHH-HHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhC
Q 017535 87 FPWSALSFAAMWLELTGFSHEKTAFLMALFV-IASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVL 165 (370)
Q Consensus 87 ~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~-~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (370)
..+...++.|.|++++|+++.+.+.+....+ ++.+++.+++|++.||+++|+. ..++.++.........+..
T Consensus 224 ~~~~~~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~-------l~~~~~~~~~~~~~~~~~~ 296 (356)
T TIGR00901 224 GDSAATVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYA-------LLLFGIVQALTNAGFVWLA 296 (356)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHH-------HHHHHHHHHHHHHHHHHHH
Confidence 3455557899999669999999998887765 5788999999999999998865 2222222221111111111
Q ss_pred CCC------CChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHH
Q 017535 166 PDD------PSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFES 219 (370)
Q Consensus 166 ~~~------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 219 (370)
... ....+.+....++.+++.+...+ ...+++.+.+|++++|+..|+.+...+
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 297 SNGHHDGITFPHLLMLFLTITLEAVTGGLGTV-AFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred hcCcccccccchHHHHHHHHHHHHHHhHHHHH-HHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 111 01233445555566776666666 779999999999999999999887764
No 65
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.64 E-value=2.4e-14 Score=132.13 Aligned_cols=132 Identities=13% Similarity=0.031 Sum_probs=86.7
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCChh
Q 017535 93 SFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTP 172 (370)
Q Consensus 93 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (370)
.+.|.+++..|++.....+.....++..+++.+++++++||++||+. ...+.++..+....+...........
T Consensus 292 ~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~-------~i~~~~~~~v~~~~l~~~~~~~~~~~ 364 (479)
T PRK10077 292 YYAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPL-------QIIGALGMAIGMFSLGTAFYTQAPGI 364 (479)
T ss_pred HHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHH-------HHHhHHHHHHHHHHHHHHHhcCcccH
Confidence 45677777889988777777777888999999999999999998865 23332222222111111111111111
Q ss_pred HHHHHHHHHHHHHHHh-cCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHH
Q 017535 173 VMHGLVLVVTGLFISW-NAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILA 233 (370)
Q Consensus 173 ~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~ 233 (370)
+ ....+++.+.+.+. ..| ..++++.|.+|++.|+++.|+.+...+++..+++.+.+.+.
T Consensus 365 ~-~~~~~~~~~~~~~~~~~~-~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~ 424 (479)
T PRK10077 365 V-ALLSMLFYVAAFAMSWGP-VCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMD 424 (479)
T ss_pred H-HHHHHHHHHHHHhccccc-hhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 1 22222333333332 234 66889999999999999999999999999999987776555
No 66
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.63 E-value=1.6e-14 Score=130.27 Aligned_cols=140 Identities=19% Similarity=0.236 Sum_probs=101.0
Q ss_pred HHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCC
Q 017535 89 WSALSFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPD 167 (370)
Q Consensus 89 ~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (370)
+....++|.|+ +++|++..+.+.+.+...++.+++.++.|++.||+++|+. ..++..+..... +......
T Consensus 255 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~-------~~~~~~~~~~~~-~~~~~~~- 325 (405)
T TIGR00891 255 HPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKA-------YVCSLLAGQLLI-IPVFAIG- 325 (405)
T ss_pred hhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhh-------hHHHHHHHHHHH-HHHHHhC-
Confidence 34446788888 7789999999999999999999999999999999998875 232222221111 1111111
Q ss_pred CCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhhcCCC
Q 017535 168 DPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYGFK 240 (370)
Q Consensus 168 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~~g~~ 240 (370)
.. .+.+.+..++.++..+...+ ...+++.+.+|++.+|++.|+.+.+.++++.++|.+.|++.|..+.|.
T Consensus 326 -~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~ 395 (405)
T TIGR00891 326 -AN-VAVLGLGLFFQQMLVQGIWG-ILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYG 395 (405)
T ss_pred -Cc-hHHHHHHHHHHHHHHccchh-hHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 11 22333333445554444445 567788999999999999999999999999999999999999883354
No 67
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.63 E-value=2.2e-15 Score=133.31 Aligned_cols=208 Identities=26% Similarity=0.367 Sum_probs=133.2
Q ss_pred ccccccccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccccCcccchhhhhhHH-HHhhhccchHHHHHHHH
Q 017535 3 PMTFMGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQ-EAKSVIKIPSFQIIVAQ 81 (370)
Q Consensus 3 g~~~~~~~gWr~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 81 (370)
++.+.+.+|||+.|++.+++.++..++..++.++++..+..+.+.++..+ .+..+. .++.++++|.++..+..
T Consensus 141 ~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 214 (352)
T PF07690_consen 141 GGFLISYFGWRWAFLISAILSLIAAILFILFLPEPPPPRERESPKESESK------KPKPLKPGFKSLFKNPVLWILLIA 214 (352)
T ss_dssp HHHCCCHCHHCCHHHHHHHHHHHHHHHHHCCC---STTTT--SSTTTT--------HHHCCCH-CTHHHHHHCCHHHHHH
T ss_pred hhhhhhccccccccccccchhhhhhhhHhhhhhhcccccccccccccccc------cccccccccccccccchhhhhhhh
Confidence 45666788999999999999888877554555543322222111111000 011111 24556666665533333
Q ss_pred Hhhhh-hhHHHHHHHHHHH-HHhCCC-HHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHH
Q 017535 82 GVTGS-FPWSALSFAAMWL-ELTGFS-HEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLA 158 (370)
Q Consensus 82 ~~~~~-~~~~~~~~~~~~~-~~~g~s-~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (370)
.+... .......+.|.|+ +.+|++ ..+.+.+..+..+..+++.++.|++.||+++++. ..+...... ..
T Consensus 215 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-------~~~~~~~~~-~~ 286 (352)
T PF07690_consen 215 FFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRR-------LLIAILLLI-LG 286 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH-------HHHHHHHHH-HH
T ss_pred hhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHH-------HHHHHHHHH-HH
Confidence 33333 3344557899997 899999 8999999999999999999999999999887644 122212111 11
Q ss_pred HHHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhh
Q 017535 159 ALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAP 226 (370)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 226 (370)
...+..... ........+..++.|++.+...+ ...+++.+.+|++++|++.|+.++..++++.++|
T Consensus 287 ~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 287 ALGLLLLPF-SSSPVWLIIALFLIGFGFGIVFP-ILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHCCSHH-HCHHHHHHHHHHHHHHHHHHHCH-HHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-hhhHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 222211111 11233344466667887777777 7899999999999999999999999999999887
No 68
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.63 E-value=1.4e-14 Score=133.50 Aligned_cols=140 Identities=11% Similarity=0.037 Sum_probs=93.5
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHH-HhCCCCC-
Q 017535 92 LSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLL-LVLPDDP- 169 (370)
Q Consensus 92 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~- 169 (370)
..+.|.+++..|++..+.+....+..++.+++.+++|+++||+++|+. ..++..+......... .......
T Consensus 304 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (481)
T TIGR00879 304 MYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPL-------LLIGAAGMAICLFVLGILGASFVTG 376 (481)
T ss_pred HHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHH-------HHHHHHHHHHHHHHHHHHhhcccCC
Confidence 356777778889999888888888899999999999999999998865 2222222221111111 1111111
Q ss_pred -----ChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhhcCCCC
Q 017535 170 -----STPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYGFKP 241 (370)
Q Consensus 170 -----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~~g~~~ 241 (370)
.........++..+++.+ ..+ ....++.+.+|++.|+++.|+.++..+++++++|.+.+.+.+.. ++..
T Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~-~~~~ 450 (481)
T TIGR00879 377 SSKSSGNVAIVFILLFIAFFAMG-WGP-VPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESI-GVGG 450 (481)
T ss_pred cccchhHHHHHHHHHHHHHHHcc-ccC-eehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-Cccc
Confidence 111222222222222222 234 56777789999999999999999999999999999999999876 5443
No 69
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.63 E-value=3.9e-14 Score=126.70 Aligned_cols=208 Identities=14% Similarity=0.044 Sum_probs=131.3
Q ss_pred CccccccccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccccCcccchhhhhhHHHHhhhccchHHHHHHHH
Q 017535 2 APMTFMGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQ 81 (370)
Q Consensus 2 ~g~~~~~~~gWr~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (370)
+++++.+++|||..|++.++..++.. +..++.|+++++. ++++ .. ++..+++++++|+|.++.....
T Consensus 147 lgg~l~~~~g~~~~f~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~---~~-------~~~~~~~~~i~~~~~~~~~~~~ 213 (382)
T PRK11128 147 LTGKLVSWFGEQAILWILTAGVASML-LGQLLRPTIMPQG--ESRQ---QE-------SAGWPAWKALLKEPTVWRFLLC 213 (382)
T ss_pred HHHHHHHHcChhHHHHHHHHHHHHHH-HHHHccCCCCCcc--cccc---cc-------ccccchHHHHHcChhHHHHHHH
Confidence 35667788999999998776544433 3333334432111 1000 00 1112345678999997765554
Q ss_pred Hhhhhhh-HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHH
Q 017535 82 GVTGSFP-WSALSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAAL 160 (370)
Q Consensus 82 ~~~~~~~-~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (370)
.++.... ....++.|.|+++.|++..+.+.+.+...++.++..++.|++.||+++|+. +.++...... ...
T Consensus 214 ~~l~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~-------l~~~~~~~~~-~~~ 285 (382)
T PRK11128 214 VSLLQGSHAAYYGFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDL-------LLLSAICGVV-RWG 285 (382)
T ss_pred HHHHHHHhHhHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH-------HHHHHHHHHH-HHH
Confidence 4433333 344477888887799999999999888888888999999999999988865 2333222221 111
Q ss_pred HHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHH-HHHhhchhhHHHHHHHHhh
Q 017535 161 LLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSF-ESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~g~l~~~~ 236 (370)
..... + ..+.+.+..++.|++.+...+ ....+..+. +++++++..++.+.. ..+|..+||.+.|.+.|..
T Consensus 286 -~~~~~--~-~~~~~~~~~~l~g~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~ 356 (382)
T PRK11128 286 -LMGST--T-ALPWLIVIQILHCGTFTVCHL-AAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHL 356 (382)
T ss_pred -HHHhh--h-hHHHHHHHHHHHHHHHHHHHH-HHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 11122 2 233445566667777666555 556666665 555578888888744 4566689999999999987
No 70
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.63 E-value=9.6e-14 Score=124.84 Aligned_cols=207 Identities=14% Similarity=0.087 Sum_probs=129.3
Q ss_pred ccccccccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccccCcccchhhhhhHHHHhhhccchHHHHHHHHH
Q 017535 3 PMTFMGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQG 82 (370)
Q Consensus 3 g~~~~~~~gWr~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (370)
++.+.+..|||+.|++.+++.++..++..++.||++..+..+ .+..+.++.++++|.++..+...
T Consensus 152 ~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~ 216 (394)
T PRK11652 152 GGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPETRPADARR---------------TRVLASYRTLLSNRRFNCYLLML 216 (394)
T ss_pred HHHHHhccChHHHHHHHHHHHHHHHHHHHHhCCccCccccch---------------hHHHHHHHHHHcChHHHHHHHHH
Confidence 345566789999999988877776666556666632211100 12345566788888866544433
Q ss_pred hhhhhhHH-HHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHH
Q 017535 83 VTGSFPWS-ALSFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAAL 160 (370)
Q Consensus 83 ~~~~~~~~-~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (370)
+....... +..+.+.++ +.+|+++.+.+++.....++.+++.++.+++.||.+++.. .......+.... .
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~------~~~~~~~~~~~~--~ 288 (394)
T PRK11652 217 IGTLAGIAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMW------QSVICCLLAGLL--M 288 (394)
T ss_pred HHHHHHHHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHH--H
Confidence 33332222 234567777 5689999999998888888888888999999998873321 111111111111 1
Q ss_pred HHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHh
Q 017535 161 LLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQH 235 (370)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~ 235 (370)
.......... .+.+....++.+++.+...| ...+...+..| +.+|++.++.+....+|+.+++.+.+.+...
T Consensus 289 ~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~ 360 (394)
T PRK11652 289 WIPGWFGVMN-VWTLLVPAALFFFGAGMLFP-LATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAMLPQT 360 (394)
T ss_pred HHHHHhcccc-HHHHHHHHHHHHHHHHHHHH-HHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 1111111111 23344455666666676666 66777778776 5689999999999999999999888876543
No 71
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.62 E-value=2.9e-14 Score=144.86 Aligned_cols=218 Identities=11% Similarity=-0.011 Sum_probs=140.8
Q ss_pred CccccccccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccccCcccchhhhhhHHHHhhhccchHHHHHHHH
Q 017535 2 APMTFMGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQ 81 (370)
Q Consensus 2 ~g~~~~~~~gWr~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (370)
+|+++....||++.|++.+++.++ +++..+.+++++....... . ... ..+.....++.+.++|.++.+.+.
T Consensus 163 l~g~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~----~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 233 (1140)
T PRK06814 163 IGGLATISGNFVILVALLMGIAVL-GWLASLFIPKTGNAAPDLK-I----DRN---IIRSTITLLKYAKADKRIWLAILG 233 (1140)
T ss_pred HHHHHHhccccHHHHHHHHHHHHH-HHHHHhhCCCCCCCCCCCe-e----ccc---hHHHHHHHHHHHhcCchHHHHHHH
Confidence 456777889999999544444444 3444444454322111100 0 000 012344567788889987776665
Q ss_pred Hhhhhhh-HHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHH
Q 017535 82 GVTGSFP-WSALSFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAA 159 (370)
Q Consensus 82 ~~~~~~~-~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (370)
+...... ..+.+++|.|+ +.+|.++...+++.+...++.++|.++.|+++++..+++.. ....++.++....
T Consensus 234 ~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~------~~~~~~~~~~~~~ 307 (1140)
T PRK06814 234 ISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYV------PIGALLMGLFGLD 307 (1140)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeee------hHHHHHHHHHHHH
Confidence 5444443 45558899999 67899999999999999999999999999999876655431 1111111111111
Q ss_pred HHHH---------------hCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhch
Q 017535 160 LLLL---------------VLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSF 224 (370)
Q Consensus 160 ~~~~---------------~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 224 (370)
+.+. .+.. ....+.+.+..+++|++.+...+ ...+++++.+|++.+|+++|+.+++..++..+
T Consensus 308 l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~i 385 (1140)
T PRK06814 308 LAFASSSVPAEPAQLKSILVFLS-KRHGWRILIDLFGLAAAGGLYIV-PLFAALQAWANPAHRARVIAANNVLNAAFMVA 385 (1140)
T ss_pred HHhcccccccccccccchhhhhc-ccccHHHHHHHHHHHHHHHHhHH-HHHHHHHhhCCcccceeeeHHHHHHHHHHHHH
Confidence 1110 0000 01233455566677777777776 67899999999999999999999999999999
Q ss_pred hhHHHHHHHHhh
Q 017535 225 APPVVGILAQHV 236 (370)
Q Consensus 225 ~~~~~g~l~~~~ 236 (370)
++.+.|.+.+..
T Consensus 386 g~~~~g~l~~~~ 397 (1140)
T PRK06814 386 GTIILALLQALG 397 (1140)
T ss_pred HHHHHHHHHHhc
Confidence 999999987653
No 72
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.62 E-value=4.1e-14 Score=129.46 Aligned_cols=211 Identities=20% Similarity=0.210 Sum_probs=139.7
Q ss_pred CccccccccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccccCcccchhhhhhHHHHhhhccchHHHHHHHH
Q 017535 2 APMTFMGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQ 81 (370)
Q Consensus 2 ~g~~~~~~~gWr~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (370)
+||.+...+|-.++|++.++..++...+. ...+.+...+... ++.. .+.....++.+.++|.+...+..
T Consensus 158 lgG~Lva~~G~~~~f~inalsfl~~i~~l-~~~~~~~~~~~~~-------~e~~---~~~l~~G~ryv~~~~~l~~~l~~ 226 (524)
T PF05977_consen 158 LGGILVAFFGAAAAFLINALSFLISILAL-LRWKPPPPPSSLP-------RERF---FSALREGLRYVRSSPPLRSVLLR 226 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHccccccccccc-------hhhh---hhhHHHHHHHHhcchHHHHHHHH
Confidence 35666677888899988877655543333 3333321111100 0011 14455667777778875544433
Q ss_pred -HhhhhhhHHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHH
Q 017535 82 -GVTGSFPWSALSFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAA 159 (370)
Q Consensus 82 -~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (370)
++++.........+|.+. +.+|.++...|++.+..++++++|.++.+++.+|+++++. ...+.+... ..
T Consensus 227 ~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~l-------v~~~~~~~a-~~- 297 (524)
T PF05977_consen 227 SFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRL-------VLLASLLFA-LA- 297 (524)
T ss_pred HHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchh-------hHHHHHHHH-HH-
Confidence 333333333446678888 7899999999999999999999999999988887766543 222222221 11
Q ss_pred HHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 160 LLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
...+.+ ..+.+...+.+++.|++...... ...+.++..+|++.+|++++++.++...+..+|..+.|.+.+..
T Consensus 298 ~~~lal---~~~~~~~~~~l~l~G~~~~~~~~-~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~ 370 (524)
T PF05977_consen 298 LLLLAL---SPSFWLALIALFLAGAAWIIANS-SLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHF 370 (524)
T ss_pred HHHHhc---chHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 111111 12244556667777877766665 66788899999999999999999999999999999999999987
No 73
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.62 E-value=8.8e-14 Score=120.09 Aligned_cols=199 Identities=15% Similarity=0.129 Sum_probs=126.1
Q ss_pred cCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccccCcccchhhhhhHHHHhhhccchHHHHHHH-HHhhhhhh
Q 017535 10 PGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVA-QGVTGSFP 88 (370)
Q Consensus 10 ~gWr~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 88 (370)
..||++|++.+++.+++.+++.+ .+-|+.++.+.++. ..+ + .. +.++++++|.++...+ .+++...-
T Consensus 89 ~~~~~~yl~ia~~~~~~~i~~~~-~~~p~~~~~~~~~~--~~~-~-----~~---~~~~~~~~~~~~l~~~~~f~yvg~e 156 (310)
T TIGR01272 89 AKVHTPYLLLAGALAVLAIIFAF-LPLPELQEADVARV--SSG-D-----TT---QKTSAFQFTHLVLGALGIFVYVGAE 156 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-ccCCCCCccccccc--ccc-c-----cc---chhhHHhhHHHHHHHHHHHHHHHHH
Confidence 57999999887776665554433 33333221111100 000 0 00 1123566777555443 33433344
Q ss_pred HHHHHHHHHHHH-H--hCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhC
Q 017535 89 WSALSFAAMWLE-L--TGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVL 165 (370)
Q Consensus 89 ~~~~~~~~~~~~-~--~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (370)
.+...|++.|++ . +|+++.+.+...+.+..+.++|+++++++.||+++|+. ..++..++.... +.+...
T Consensus 157 ~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~-------l~~~~~l~~~~~-~l~~~~ 228 (310)
T TIGR01272 157 VSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRY-------LAFNAFLAVLLS-IGAALT 228 (310)
T ss_pred HHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHH-------HHHHHHHHHHHH-HHHHHc
Confidence 566689999994 3 59999999999999999999999999999999998765 222222222222 222111
Q ss_pred CCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 166 PDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 166 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
+. . . .....++.|++.+..+| ...+...+..|++ .+++.++. .+..+|+++.|.+.|.+.|..
T Consensus 229 -~~-~-~--~~~~~~l~g~~~s~i~P-~~~s~a~~~~~~~-~~~asai~-~~~~~Gg~i~P~l~G~lad~~ 291 (310)
T TIGR01272 229 -HG-Y-V--AMWFVLALGLFNSIMFP-TIFSLALNALGRH-TSQGSGIL-CLAIVGGAIVPLLQGSLADCL 291 (310)
T ss_pred -CC-H-H--HHHHHHHHHHHHHHHHH-HHHHHHHhhhhhh-hhhhHHHH-HHHHhcchHHHHHHHHHHHhc
Confidence 11 1 1 22344567788888888 7677777767654 67777775 567899999999999999987
No 74
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.61 E-value=3.5e-15 Score=134.47 Aligned_cols=126 Identities=22% Similarity=0.323 Sum_probs=93.6
Q ss_pred cccCchhHHHHHHHHHHHHHHHHHHhcCC-CCCCCCCCCCCc-------c-ccCcccchhhhhhHHHHhhhccchHHHHH
Q 017535 8 GIPGWRISFHIVGLISVVVGTLVRLFAND-PHFPDGGTANSD-------Q-VSSKSFRSDVKVLIQEAKSVIKIPSFQII 78 (370)
Q Consensus 8 ~~~gWr~~f~i~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~-------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (370)
...||||.|++.|+++++.++++++++|+ |.+....+++++ + .......+ +..+..+++.+++|.+|.+
T Consensus 201 ~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~~~~fl~~~ek~~~~~~~~~~~~~~~~~--~~~~~~~~~a~~dp~vw~~ 278 (495)
T KOG2533|consen 201 GLAGWRWLFIIEGVITLVLGIVVFFFLPDNPSKAWFLTDEEKELVVERLRESPSGGIEN--KFKWKGFKEALKDPGVWPF 278 (495)
T ss_pred CcCCceeehhHHHHHHHHHHheEEEEecCChhhccccchHHHHHHHHHHHhccCCCccc--ccCHHHHHHHHhchhHHHH
Confidence 45799999999999999999999999888 553322222210 0 01111111 1456778899999997766
Q ss_pred HHHHhhhh-hhHHHHHHHHHHHHH-hCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Q 017535 79 VAQGVTGS-FPWSALSFAAMWLEL-TGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLS 135 (370)
Q Consensus 79 ~~~~~~~~-~~~~~~~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~ 135 (370)
.+..++.. ..+++.+|+|.|++. .|++..+++.+..++.++++++.+++|+++||+.
T Consensus 279 ~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~ 337 (495)
T KOG2533|consen 279 SLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLK 337 (495)
T ss_pred HHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHh
Confidence 55554444 457788999999955 6799999999999999999999999999999953
No 75
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.61 E-value=7e-14 Score=125.64 Aligned_cols=201 Identities=15% Similarity=0.119 Sum_probs=114.0
Q ss_pred cccccccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccccCcccchhhhhhHHHHhhhccchHHHHHHHHHh
Q 017535 4 MTFMGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGV 83 (370)
Q Consensus 4 ~~~~~~~gWr~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (370)
+.+.+..|||+.|++.++++++..++.++..||++.++.. ++ ....+..++.++++.++.......
T Consensus 148 ~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~---~~-----------~~~~~~~~~~~~~~~~~~~~~~~~ 213 (392)
T PRK10473 148 HLIMLKFPWQSLFYTMAAMGILVLLLSLFILKETRPARAP---AA-----------SSKPRENSESLLNRFFLSRLVITT 213 (392)
T ss_pred HHHHhCcChHHHHHHHHHHHHHHHHHHHHHcCCCCCcccC---Cc-----------cchHHHHHHHHhCHHHHHHHHHHH
Confidence 3445678999999999988888777776666764322110 00 111223346677887554333322
Q ss_pred hh-hhhHHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHH
Q 017535 84 TG-SFPWSALSFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALL 161 (370)
Q Consensus 84 ~~-~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (370)
.. ........+.|.++ +.+|+++.+.+.+.+...++.+++.++.+++.||+++|+. ..++..+........
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~-------~~~~~~~~~~~~~~~ 286 (392)
T PRK10473 214 LSVTVILTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTL-------MLTSQVLFLAAGITL 286 (392)
T ss_pred HHHHHHHHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHH-------HHHHHHHHHHHHHHH
Confidence 22 22233345667777 7789999999999999999999999999999999998865 233322222211111
Q ss_pred HHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 162 LLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
.. .. ......+...++..|++.+. + .....+..|.++++ +..+....++..+++.+.+++.+..
T Consensus 287 ~~-~~--~~~~~~~~~~l~~~g~~~~~--~---~~~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~~~ 350 (392)
T PRK10473 287 AL-SP--SHAVSLFGITLICAGFSVGF--G---VAMSQALGPFSLRA---GVASSTLGIAQVCGSSLWIWLAAVL 350 (392)
T ss_pred HH-HH--HHHHHHHHHHHHHHHHHHHh--H---HHHHHHhccCcccc---cHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 11 11 11122222333334443332 2 22223334433332 3333444566677777777888776
No 76
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.60 E-value=1.8e-13 Score=129.66 Aligned_cols=110 Identities=12% Similarity=0.020 Sum_probs=76.9
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCC
Q 017535 113 MALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPA 192 (370)
Q Consensus 113 ~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 192 (370)
..+..++.++|.+++|+++||+|||+. ++++.++..+..++.. +. +. ...+.+..++.+++.+...+
T Consensus 601 ~~l~~l~~i~G~il~g~L~Dr~GRr~~-------l~~~~~lsai~~ll~~--~~--~s-~~~ll~~~~l~g~~~~~~~~- 667 (742)
T TIGR01299 601 NFLGTLAVLPGNIVSALLMDKIGRLRM-------LAGSMVLSCISCFFLS--FG--NS-ESAMIALLCLFGGLSIAAWN- 667 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHH-------HHHHHHHHHHHHHHHH--HH--cc-HHHHHHHHHHHHHHHHHHHH-
Confidence 445578889999999999999999976 3333333322222211 11 11 11233333455555544455
Q ss_pred CccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHh
Q 017535 193 TNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQH 235 (370)
Q Consensus 193 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~ 235 (370)
...+++.|.+|.+.|++++|+.+....+|++++|.++|.+.+.
T Consensus 668 ~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~ 710 (742)
T TIGR01299 668 ALDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGI 710 (742)
T ss_pred HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6688899999999999999999999999999999999988765
No 77
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.60 E-value=5.6e-14 Score=124.50 Aligned_cols=161 Identities=16% Similarity=0.098 Sum_probs=106.6
Q ss_pred hhhccchHHHHHHHHHhhh-hhhHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHH
Q 017535 67 KSVIKIPSFQIIVAQGVTG-SFPWSALSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRII 145 (370)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~ 145 (370)
++++|+|.++.......+. ...+...+|+|.|+++.|++..+.+.+.+...++.++++++.|++.||+++|+..
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~----- 265 (355)
T TIGR00896 191 VRIWRSPLAWQVTVFFGLQSGLYYSLIGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGI----- 265 (355)
T ss_pred chhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHH-----
Confidence 3567888866544443333 3345556899999977899999999999999999999999999999999655430
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhcccc-CCCchhHHHHHHHHHHHHhhch
Q 017535 146 LAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIV-PEKSRTSVYAMDRSFESILSSF 224 (370)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~ 224 (370)
..++..+..... +.+...+. .. .. . ..++.|++.+...+ ...+.+.+.. +++.++...++.+.+.++++++
T Consensus 266 -~~~~~~~~~~~~-~~~~~~~~-~~-~~-~--~~~l~g~~~g~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 337 (355)
T TIGR00896 266 -VAVLAVLQLVGL-CGLLFAPM-HG-LW-A--WALVLGLGQGGAFP-LALTLIGLRSRQAAQAAALSAMAQSIGYLLAAL 337 (355)
T ss_pred -HHHHHHHHHHHH-HHHHHhhh-hH-HH-H--HHHHHHHhhhhHhH-HHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHH
Confidence 122222222111 11111111 11 11 1 23455666666565 4445554434 4566789999999999999999
Q ss_pred hhHHHHHHHHhhcCCC
Q 017535 225 APPVVGILAQHVYGFK 240 (370)
Q Consensus 225 ~~~~~g~l~~~~~g~~ 240 (370)
+|.+.|++.|+.++|.
T Consensus 338 gp~~~G~l~~~~g~~~ 353 (355)
T TIGR00896 338 GPLFVGVLHDISGNWL 353 (355)
T ss_pred HHHHHHHHHHHhcccC
Confidence 9999999999985554
No 78
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.60 E-value=1.7e-13 Score=123.49 Aligned_cols=131 Identities=24% Similarity=0.281 Sum_probs=89.9
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCC
Q 017535 91 ALSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPS 170 (370)
Q Consensus 91 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (370)
...++|.|+.+.|++ ..+.......++.+++.++.|++.||+++|+. ...+..+.... ...+. .. +.
T Consensus 235 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~-------~~~~~~~~~~~-~~~~~-~~--~~ 301 (399)
T PRK05122 235 IATFITLYYAARGWD--GAALALTLFGVAFVGARLLFGNLINRLGGLRV-------AIVSLLVEILG-LLLLW-LA--PS 301 (399)
T ss_pred HHHHHHHHHHHcccc--cchHHHHHHHHHHHHHHHHHHHHHHHhccHHH-------HHHHHHHHHHH-HHHHH-Hh--cc
Confidence 336778888656663 45566667788889999999999999987754 22222222111 11111 11 11
Q ss_pred hhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 171 TPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 171 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
.+...+..++.|++.+...+ .......+..|++++|++.|+++...+++..+++.+.|++.+..
T Consensus 302 -~~~~~~~~~l~G~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 365 (399)
T PRK05122 302 -PWMALIGAALTGFGFSLVFP-ALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWF 365 (399)
T ss_pred -HHHHHHHHHHHHHhHHHHHH-HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 22344455667776665555 44566678889999999999999999999999999999999876
No 79
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.59 E-value=3.6e-14 Score=129.21 Aligned_cols=165 Identities=19% Similarity=0.273 Sum_probs=125.1
Q ss_pred hhhccchHHHHHHHHHhhhhhhHHHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHH
Q 017535 67 KSVIKIPSFQIIVAQGVTGSFPWSAL-SFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRII 145 (370)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~ 145 (370)
.+++++|.++.+.....+....+... .++|.|.+..|++..+++.+.++.++..++++++.|+++|+...++..
T Consensus 292 ~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~----- 366 (509)
T KOG2504|consen 292 LSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALV----- 366 (509)
T ss_pred HHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHH-----
Confidence 37889999888888877777775555 688999999999999999999999999999999999999997643320
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchh
Q 017535 146 LAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFA 225 (370)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 225 (370)
...++.+... ...++ .+.... .+.+.....++|++.+.... .....+.+.++.++-..++|+...+..++..+|
T Consensus 367 ~~~~~ll~~g--l~~~~--~p~~~~-~~~l~~~~~~fG~~~g~~~~-l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~g 440 (509)
T KOG2504|consen 367 LFLLTLLIAG--LARLF--LPFATT-YVGLIVFSILFGFCVGSFSS-LTPVILVDLVGLEKLSNAYGLLLLFQGIGALVG 440 (509)
T ss_pred HHHHHHHHHH--HHHHH--HHHhcc-HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcChhhcchHHHHHHHHhHHHHHcC
Confidence 1111111111 11112 122222 34566667777887777665 556688899999999999999999999999999
Q ss_pred hHHHHHHHHhhcCCCCC
Q 017535 226 PPVVGILAQHVYGFKPI 242 (370)
Q Consensus 226 ~~~~g~l~~~~~g~~~~ 242 (370)
|++.|++.|.+++|...
T Consensus 441 pPiag~~~d~tg~Y~~~ 457 (509)
T KOG2504|consen 441 PPIAGLLYDITGNYDHA 457 (509)
T ss_pred cccceeeeeccCCeeee
Confidence 99999999999666654
No 80
>PRK10133 L-fucose transporter; Provisional
Probab=99.57 E-value=4.6e-13 Score=121.56 Aligned_cols=158 Identities=13% Similarity=0.098 Sum_probs=109.3
Q ss_pred HHHHhhhccchHHHHHHH-HHhhhhhhHHHHHHHHHHH-H-HhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCC
Q 017535 63 IQEAKSVIKIPSFQIIVA-QGVTGSFPWSALSFAAMWL-E-LTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFP 139 (370)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~-~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~ 139 (370)
.+.+++++++|.++...+ .++.....++...|.+.|+ + .+|+++.++++.+....++.++|+++++++.||+++|+.
T Consensus 248 ~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~ 327 (438)
T PRK10133 248 SASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKV 327 (438)
T ss_pred hhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHH
Confidence 344567888998655433 3333333355557888886 4 589999999999999999999999999999999998865
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHH
Q 017535 140 NSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFES 219 (370)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 219 (370)
...+..+......+. ...+ . . . ....+.+.|++.+...| +.++...+..|++ .+++.++.. +..
T Consensus 328 -------l~~~~~~~~~~~~~~-~~~~-~-~-~--~~~~~~l~glg~~~i~P-~~~s~a~~~~~~~-~~~as~l~~-~~~ 391 (438)
T PRK10133 328 -------LAAYALIAMALCLIS-AFAG-G-H-V--GLIALTLCSAFMSIQYP-TIFSLGIKNLGQD-TKYGSSFIV-MTI 391 (438)
T ss_pred -------HHHHHHHHHHHHHHH-HHcC-C-h-H--HHHHHHHHHHHHHHHHH-HHHHHHHcccchh-hccchhHHh-HHh
Confidence 233222222222121 1122 1 1 1 23345667788888888 7788888877654 778888886 455
Q ss_pred HhhchhhHHHHHHHHhh
Q 017535 220 ILSSFAPPVVGILAQHV 236 (370)
Q Consensus 220 ~~~~~~~~~~g~l~~~~ 236 (370)
+++.++|.+.|.+.|..
T Consensus 392 ~g~~~~~~i~G~l~~~~ 408 (438)
T PRK10133 392 IGGGIVTPVMGFVSDAA 408 (438)
T ss_pred ccchHHHHHHHHHHHhc
Confidence 78899999999999876
No 81
>PRK10054 putative transporter; Provisional
Probab=99.56 E-value=8.5e-14 Score=124.88 Aligned_cols=200 Identities=11% Similarity=0.141 Sum_probs=121.8
Q ss_pred ccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccccCcccchhhhhhHHHHhhhccchHHHHHHHHHhhhhhh
Q 017535 9 IPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGVTGSFP 88 (370)
Q Consensus 9 ~~gWr~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (370)
.+|||.+|++.+++.++..++..+.+++++.++..+ + +.. .+.++++|+|.++......++....
T Consensus 157 ~~g~~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~---~-----------~~~-~~~~~~~~~~~~~~~~~~~~l~~~~ 221 (395)
T PRK10054 157 MQSINLPFWLAAICSAFPLVFIQIWVQRSEKAIATE---T-----------GSV-WSPSVLLQDKALLWFTCSGFLASFV 221 (395)
T ss_pred HhccCcHHHHHHHHHHHHHHHHHHHHhccccccccc---h-----------hhh-hhhhhhccCceehHHHHHHHHHHHH
Confidence 369999999988877766555555444432111100 0 000 1235678888865544433333332
Q ss_pred -HHHHHHHHHHH-H--HhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHh
Q 017535 89 -WSALSFAAMWL-E--LTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLV 164 (370)
Q Consensus 89 -~~~~~~~~~~~-~--~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (370)
.....+.+.|+ . +.+.+....+.+.....+.........|++.||.++|+. ...+..+... ....+.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-------l~~~~~~~~~-~~~~~~- 292 (395)
T PRK10054 222 SGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPL-------MTAGTLCFVI-GLVGFI- 292 (395)
T ss_pred HHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhH-------HHHHHHHHHH-HHHHHH-
Confidence 22334666666 2 345566667777777777667777888899998877754 2222222221 111111
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 165 LPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
... ...+.+.+..+..+++.+...| ...+.+.+..|++.+++..+..+ ...+|.++||.++|.+.|+.
T Consensus 293 ~~~--~~~~~~~~~~~~~~~g~~~~~p-~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~ 360 (395)
T PRK10054 293 FSG--NSLLLWGMSAAVFTVGEIIYAP-GEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTL 360 (395)
T ss_pred Hcc--hHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHc
Confidence 111 1233344455666776666666 66778888899999999998765 66789999999999999987
No 82
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.56 E-value=3.6e-13 Score=115.51 Aligned_cols=211 Identities=13% Similarity=0.117 Sum_probs=153.5
Q ss_pred cccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccccCcccchhhhhhHHHHhhhccchHH-HHHHHHHhhhh
Q 017535 8 GIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSF-QIIVAQGVTGS 86 (370)
Q Consensus 8 ~~~gWr~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 86 (370)
+...=|..+.+.++..++..+..++.++++++... ..++......++.+..++++.+++.+ ..++..+++.-
T Consensus 194 ~~~~~ri~~~l~A~W~li~~iPm~~~v~~~~~~~~-------~~~~~l~~g~k~L~~t~k~i~~~~~i~~FLiA~~~~~D 266 (438)
T COG2270 194 DGEDVRITGLLAALWWLLFALPMILNVHDAEKISS-------PPPTALRNGFKELKSTFKEIRGRKNLVLFLIARFFYID 266 (438)
T ss_pred ccccchhHHHHHHHHHHHHHhHHHhcccccccccc-------cchHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHh
Confidence 34456888999999989988888888888654220 01112223346677778888888884 44555666666
Q ss_pred hhHHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhC
Q 017535 87 FPWSALSFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVL 165 (370)
Q Consensus 87 ~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (370)
...+.+++...|. ..+|++..+..++.....+.+++|+++.|++.+|++.|+. ..++.++........+.
T Consensus 267 Gv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~v-------l~~~lvi~~~~~~~~~~-- 337 (438)
T COG2270 267 GVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPV-------LMIGLVILSIAALYLIF-- 337 (438)
T ss_pred hHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcee-------ehHHHHHHHHHHHHHHH--
Confidence 6677778888888 6999999999999999999999999999999999999966 33333332222222222
Q ss_pred CCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhhcC
Q 017535 166 PDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYG 238 (370)
Q Consensus 166 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~~g 238 (370)
...+. .+.++..+.|++.|.... ..-++..+.+|+++.+..+|+++..+.....+||.+.+.+.+.++.
T Consensus 338 ~~~~~---~f~i~gll~g~s~G~~qA-~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~ 406 (438)
T COG2270 338 LEGEL---DFWILGLLVGTSLGGAQA-SSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGS 406 (438)
T ss_pred ccccH---HHHHHHHHHHHhcchHHH-HHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcc
Confidence 11222 233344556666666565 6789999999999999999999999999999999999999998843
No 83
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.54 E-value=1.1e-12 Score=117.46 Aligned_cols=153 Identities=18% Similarity=0.191 Sum_probs=102.9
Q ss_pred hhccchHHHHHHHHHhhhhhh-HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHH
Q 017535 68 SVIKIPSFQIIVAQGVTGSFP-WSALSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIIL 146 (370)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~ 146 (370)
+.+++|.++......+..... ....+++|.|+++.|.++.+.+.+.+...++.++++++.|++.||+++|+.
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~------- 267 (381)
T PRK03633 195 PMLKLRQARLGVNGCIISGIVLGSLYGLMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLV------- 267 (381)
T ss_pred HHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHH-------
Confidence 456777755443333333222 233467899987789999999999998899999999999999999998864
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhh
Q 017535 147 AQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAP 226 (370)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 226 (370)
...+..+... ....+. . .. . .....++.|++.....| ...+.+.+..|+++++...+..+...++|+.++|
T Consensus 268 l~~~~~~~~~-~~~~~~--~--~~-~--~~~~~~l~g~~~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp 338 (381)
T PRK03633 268 LRVQVFVVIL-GSIAML--S--QA-A--MAPALFILGAAGFTLYP-VAMAWACEKVEHHELVAMNQALLLSYTVGSLLGP 338 (381)
T ss_pred HHHHHHHHHH-HHHHHh--h--hH-H--HHHHHHHHHHHHHhHHH-HHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222222211 111111 1 11 1 12233344544444456 6677777888888788888888888999999999
Q ss_pred HHHHHHHHhh
Q 017535 227 PVVGILAQHV 236 (370)
Q Consensus 227 ~~~g~l~~~~ 236 (370)
.+.|++.|+.
T Consensus 339 ~~~G~l~~~~ 348 (381)
T PRK03633 339 SFTAMLMQNY 348 (381)
T ss_pred HHHHHHHHHh
Confidence 9999999987
No 84
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.54 E-value=5e-13 Score=118.99 Aligned_cols=201 Identities=16% Similarity=0.102 Sum_probs=114.9
Q ss_pred ccCchhHH-HHHHHHHHHHHHHHHHhcCC-CCCCCCCCCCCccccCcccchhhhhhHHHHhhhccchHHHHHHHHHhhhh
Q 017535 9 IPGWRISF-HIVGLISVVVGTLVRLFAND-PHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGVTGS 86 (370)
Q Consensus 9 ~~gWr~~f-~i~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (370)
+.+||+.| ++.+++.++..++.+++.++ |+..+...+...+...... .+...+..++.+++|.++..........
T Consensus 162 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (366)
T TIGR00886 162 HLAWGWAFVIVPAGILLLPALLIFFVGADTPPGKPATGKLSFKGARWSV---GTGALGDQLKVFRDRHTWILALLYSVTF 238 (366)
T ss_pred cccccchhHHHHHHHHHHHHHHHHHhcccCCcccccchhcccccccccc---cchhHHHHHHHHhccchhhHHHHHHHHH
Confidence 45899999 44466655555555555554 3221111100000000000 0111224456778887655544443333
Q ss_pred -hhHHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHh
Q 017535 87 -FPWSALSFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLV 164 (370)
Q Consensus 87 -~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (370)
..+....+.|.|+ +.+|+++.+++.+.....+..+++.+++|+++||+++|+. ...+..............
T Consensus 239 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~-------~~~~~~~~~~~~~~~~~~ 311 (366)
T TIGR00886 239 GSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARK-------LLMSFLGVAMGAFLVVLG 311 (366)
T ss_pred HHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchh-------HHHHHHHHHHHHHHHHhc
Confidence 3345557889999 6789999999998888899999999999999999998865 222222222122222211
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhh
Q 017535 165 LPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILS 222 (370)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 222 (370)
.. .........+..+..++..+...+ ..+++..+..| +++|+++|+.+...++|+
T Consensus 312 ~~-~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~ 366 (366)
T TIGR00886 312 LV-SPLSLAVFIVLFVALFFFSGAGNG-STFALVPHIFR-RATGAVSGLVGAIGNLGG 366 (366)
T ss_pred CC-CcchHHHHHHHHHHHHHHhccccc-hhhhcchhhch-hhcccHHHHHHHhccCCC
Confidence 11 110233333333444444444444 55677777776 579999999999887763
No 85
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.54 E-value=4e-13 Score=124.54 Aligned_cols=140 Identities=11% Similarity=-0.005 Sum_probs=84.4
Q ss_pred hHHHHHHHHHHHHHhCCCHHHHHH------------HHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHH
Q 017535 88 PWSALSFAAMWLELTGFSHEKTAF------------LMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAI 155 (370)
Q Consensus 88 ~~~~~~~~~~~~~~~g~s~~~~~~------------~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~ 155 (370)
.|+...|.|.+++..|++....+. ...+..++.+++.+++++++||+|||+. .+++..+..
T Consensus 304 ~y~~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~-------l~~~~~~~~ 376 (502)
T TIGR00887 304 FYGVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPI-------QLMGFFILT 376 (502)
T ss_pred HHccccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhH-------HHHHHHHHH
Confidence 345556788888778886542211 1223345667788999999999999975 222222222
Q ss_pred HHHHHHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHh
Q 017535 156 PLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQH 235 (370)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~ 235 (370)
....++............ +....+...++.....+ ..+.+..|.+|++.|+++.|+.+.+..++++++|.+.+.+.+.
T Consensus 377 ~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~ 454 (502)
T TIGR00887 377 VLFFVLGFAYNHLSTHGF-LAIYVLAQFFANFGPNA-TTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQH 454 (502)
T ss_pred HHHHHHHHHHHhcchhHH-HHHHHHHHHHHhcCCCc-hhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhcc
Confidence 111111111111111111 11111111222222234 5577789999999999999999999999999999999999885
Q ss_pred h
Q 017535 236 V 236 (370)
Q Consensus 236 ~ 236 (370)
.
T Consensus 455 ~ 455 (502)
T TIGR00887 455 G 455 (502)
T ss_pred c
Confidence 3
No 86
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.54 E-value=1.8e-13 Score=117.18 Aligned_cols=129 Identities=17% Similarity=0.238 Sum_probs=105.7
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCChhHH
Q 017535 95 AAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVM 174 (370)
Q Consensus 95 ~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (370)
.|...++.++|..+.|.+.+.+.+...++..+.|.++||.+.|.. +.++++++.++..++ .+. ...++
T Consensus 52 ~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~f-------m~~gLilsai~nil~--Gfs---~s~~~ 119 (448)
T COG2271 52 MPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYF-------MAFGLILSAIVNILF--GFS---PSLFL 119 (448)
T ss_pred cHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcee-------ehHHHHHHHHHHHHH--hhh---hHHHH
Confidence 455558888999999999999999999999999999999998876 344444443322221 121 24677
Q ss_pred HHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHH--HHHHHhh
Q 017535 175 HGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVV--GILAQHV 236 (370)
Q Consensus 175 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--g~l~~~~ 236 (370)
+.++.++.|++.|+..| ++...+...+|+++||+..|+.|...++|+++.|++. +++.++.
T Consensus 120 ~~~l~~lng~fQg~Gwp-p~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~ 182 (448)
T COG2271 120 FAVLWVLNGWFQGMGWP-PCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHG 182 (448)
T ss_pred HHHHHHHHHHHhcCCCc-HHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhcc
Confidence 88888999999999999 8889999999999999999999999999999999999 7777664
No 87
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.53 E-value=1.2e-12 Score=133.43 Aligned_cols=161 Identities=14% Similarity=0.117 Sum_probs=113.1
Q ss_pred hhHHHHhhhccchHHHHHHHHHhhh-hhhHHHHHHHHHHH-HHhCCCHH-HHHHHHHHHHHHHHHhHHHHHHHHHHHhhh
Q 017535 61 VLIQEAKSVIKIPSFQIIVAQGVTG-SFPWSALSFAAMWL-ELTGFSHE-KTAFLMALFVIASSLGGLFGGRMGDFLSAR 137 (370)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~g~s~~-~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~ 137 (370)
...+.++.+++++.++..++..++. ...+....++|.|+ +.+|++.. ..+++.+...++.+++.++.|++.||++++
T Consensus 220 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~ 299 (1146)
T PRK08633 220 LLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIEL 299 (1146)
T ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEc
Confidence 3455677788888866655444333 33344557888888 78999998 999999999999999999999999998877
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHH
Q 017535 138 FPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSF 217 (370)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 217 (370)
+. ..++.++..+.. +.+. .. . ..+.+.+..+++|++.+...+ ...+++.+..|++.||+++|+.+++
T Consensus 300 ~~-------~~~~~~~~~~~~-~~~~-~~--~-~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~p~~~rg~~~~~~~~~ 366 (1146)
T PRK08633 300 GL-------VPLGALGLALSL-FLLP-TA--P-SLASVLVLFFLFGFSAGLFIV-PLNALIQFRAPEKELGKVLAANNFL 366 (1146)
T ss_pred cc-------hhHHHHHHHHHH-HHHH-Hh--h-hHHHHHHHHHHHHHHHHHhhH-HHHHHHhhcCCccchhhhhHHHHHH
Confidence 65 222222222111 1111 11 1 233455566777777776666 6788888999999999999999999
Q ss_pred HHHhhchhhHHHHHHHH
Q 017535 218 ESILSSFAPPVVGILAQ 234 (370)
Q Consensus 218 ~~~~~~~~~~~~g~l~~ 234 (370)
.+++..+++.+++.+..
T Consensus 367 ~~lg~~~~~~~~~~l~~ 383 (1146)
T PRK08633 367 QNVGMLLFLALTTLFSG 383 (1146)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99998888777665544
No 88
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.53 E-value=1.3e-12 Score=117.13 Aligned_cols=210 Identities=12% Similarity=0.082 Sum_probs=124.8
Q ss_pred ccccccccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccccCcccchhhhhhHHHHhhhccchHHHHHHHHH
Q 017535 3 PMTFMGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQG 82 (370)
Q Consensus 3 g~~~~~~~gWr~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (370)
|+.+.+. .|+..+.+.+.+.++. .+..+.+|+++.++...+ . +.. ...++.++..+.++++|.+.......
T Consensus 144 gG~l~~~-~~~~~~~i~~~~~~~~-~~~~~~l~~~~~~~~~~~--~--~~~---~~~~~~~~~~~~l~~~~~~~~~~~~~ 214 (393)
T PRK11195 144 GGALADP-HAEAALAVCALIYLLA-ALFNLFIPRLGARRPGQS--W--NPI---ALLRDFFHACRVLWRDKLGRFSLAGT 214 (393)
T ss_pred HHHHHHH-HHHHHHHHHHHHHHHH-HHHHhcCCCCcccccccC--C--CHH---HHHHHHHHHHHHHHhCchhHHHHHHH
Confidence 4445453 3777777766554333 333445565322111000 0 000 00123344456778888755443332
Q ss_pred -hhhhhhHHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHH
Q 017535 83 -VTGSFPWSALSFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAAL 160 (370)
Q Consensus 83 -~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (370)
+............|.|+ +.+|.++.+.|++.+...++.+++.++.+++.||.++++. ...+..++.. ..
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~-------~~~g~~~~~~--~~ 285 (393)
T PRK11195 215 TLFWGAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRV-------LPAGILMGLV--VL 285 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccch-------HHHHHHHHHH--HH
Confidence 22222233334567777 6789999999999999999999999999999988766643 2222222211 11
Q ss_pred HHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCc-hhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 161 LLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKS-RTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
.+ ... + ..+...+..++.|++.+...+ +..+.+++..|++. +|++.++.+...+++..++..+.+.+ +..
T Consensus 286 ~~-~~~--~-~~~~~~~~~~~~G~~~g~~~~-~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~-~~~ 356 (393)
T PRK11195 286 LM-ALQ--H-SLLPAYPLLILIGALGGFFVV-PMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLL-VKL 356 (393)
T ss_pred HH-HHH--h-HHHHHHHHHHHHHHhhhhhhh-hHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHH-HHc
Confidence 11 111 1 233344555667777776666 66777787666554 79999999999999999999998865 444
No 89
>PRK12382 putative transporter; Provisional
Probab=99.53 E-value=1.4e-12 Score=117.11 Aligned_cols=133 Identities=23% Similarity=0.256 Sum_probs=92.6
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCC
Q 017535 91 ALSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPS 170 (370)
Q Consensus 91 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (370)
...+.|.|+++.+++. .+.......++.+++.++.|++.||+++|+. ..++..+..... ..+. .. +.
T Consensus 235 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~-------~~~~~~~~~~~~-~~~~-~~--~~ 301 (392)
T PRK12382 235 IGTFVSLYFASKGWAM--AGFTLTAFGGAFVLMRVLFGWMPDRFGGVKV-------AIVSLLVETVGL-LLLW-LA--PT 301 (392)
T ss_pred HHHHHHHHHHhcCCch--hHHHHHHHHHHHHHHHHHHHHHHHhcCCCee-------hHHHHHHHHHHH-HHHH-Hc--cc
Confidence 3467788886667654 4555666777888999999999999998876 233322222211 1121 11 11
Q ss_pred hhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhhcCC
Q 017535 171 TPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYGF 239 (370)
Q Consensus 171 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~~g~ 239 (370)
.+...+..++.|++.+...+ ...+.+.+..|+++||++.|+.++..+++..++|.+.|++.|.. ||
T Consensus 302 -~~~~~~~~~l~g~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~-g~ 367 (392)
T PRK12382 302 -AWVALAGAALTGAGCSLIFP-ALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSF-GY 367 (392)
T ss_pred -HHHHHHHHHHHHHHHHhHHH-HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-Cc
Confidence 23344455666666665556 55677788899999999999999999999999999999999987 53
No 90
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.53 E-value=1.6e-12 Score=116.00 Aligned_cols=251 Identities=15% Similarity=0.136 Sum_probs=148.4
Q ss_pred cccccCchhHHHHHHHHHHHHHHHHHHhcCC-CCCCCC--CCCCCcc---------cc-Cccc----chhh-----hhhH
Q 017535 6 FMGIPGWRISFHIVGLISVVVGTLVRLFAND-PHFPDG--GTANSDQ---------VS-SKSF----RSDV-----KVLI 63 (370)
Q Consensus 6 ~~~~~gWr~~f~i~~~~~~i~~~~~~~~~~~-~~~~~~--~~~~~~~---------~~-~~~~----~~~~-----~~~~ 63 (370)
+...-.|++.+.+..+++++..++..++ || |+.--. .++++.. .+ ++.. .+.. +...
T Consensus 177 lGt~~~W~~l~~~~~i~~~~~l~~l~~~-PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~ 255 (485)
T KOG0569|consen 177 LGTEDLWPYLLAFPLIPALLQLALLPFL-PESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQ 255 (485)
T ss_pred cCCCcchHHHHHHHHHHHHHHHHHHhcC-CCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccC
Confidence 3455679999999988888877766555 55 652110 0000000 00 0000 0000 0012
Q ss_pred HHHhhhccchHHHH-----HHHHHhhhhhh-HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhh
Q 017535 64 QEAKSVIKIPSFQI-----IVAQGVTGSFP-WSALSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSAR 137 (370)
Q Consensus 64 ~~~~~~~~~~~~~~-----~~~~~~~~~~~-~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~ 137 (370)
..++++++++.... +...+...... +....|...+++..|++..++.+.....++...+.++++.++.||+|||
T Consensus 256 ~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRR 335 (485)
T KOG0569|consen 256 ISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRR 335 (485)
T ss_pred CcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 23567777765322 22233333333 3444566677799999999999999999999999999999999999999
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHH--hCCCCC-ChhH---HHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHH
Q 017535 138 FPNSGRIILAQISSLSAIPLAALLLL--VLPDDP-STPV---MHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVY 211 (370)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 211 (370)
.. ++++..++.....++.. ...... .+.. +..++.+...+..| ..| +.+-+.+|.+|++.|+.+.
T Consensus 336 pL-------ll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G-~gp-i~~fi~aELf~~~~R~aa~ 406 (485)
T KOG0569|consen 336 PL-------LLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIG-PGP-IPWFIGAELFPQSARSAAQ 406 (485)
T ss_pred HH-------HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcC-CCc-hhHHHHHHhCCccchHHHH
Confidence 65 23322222221111111 111111 1111 12222233333333 245 7788999999999999999
Q ss_pred HHHHHHHHHhhchhhHHHHHHHHhhcCCCCCCCCCCccchhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHHHhcCccc
Q 017535 212 AMDRSFESILSSFAPPVVGILAQHVYGFKPIPKGSSATEEIATDRANAASLAKALYTAIGIPMALCCFIYSFLYSTYPRD 291 (370)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~g~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (370)
++..++..+..++-......+.+..|+|. + .++.+.+++.....++..|++
T Consensus 407 s~~~~~~w~~~fiv~~~fp~l~~~~g~~~-------------------------f----ilF~i~~~~~~i~~~~~lPET 457 (485)
T KOG0569|consen 407 SVATAVNWLSNFIVGFAFPPLQNVIGPYV-------------------------F----ILFVIPLAIFLIYLYRYLPET 457 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcchh-------------------------h----HHHHHHHHHHHHHHHHhCccc
Confidence 99999999999988888888888873311 1 234455566666677777776
Q ss_pred HHHH
Q 017535 292 RERA 295 (370)
Q Consensus 292 ~~~~ 295 (370)
+.+.
T Consensus 458 kgr~ 461 (485)
T KOG0569|consen 458 KGRT 461 (485)
T ss_pred CCCC
Confidence 6543
No 91
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.52 E-value=7.5e-13 Score=119.93 Aligned_cols=166 Identities=14% Similarity=0.090 Sum_probs=115.9
Q ss_pred hHHHHhhhccchHHHHHHHHHhhhhhhHHHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCC
Q 017535 62 LIQEAKSVIKIPSFQIIVAQGVTGSFPWSAL-SFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPN 140 (370)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~ 140 (370)
...+++.+.++|.+...+............. ..+|.+.++.+.++.+.|++.+...++..++.++.|+++||++||+..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l 85 (417)
T PRK10489 6 WLLDLSLLKTHPAFRAVFIARFISIFGLGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLI 85 (417)
T ss_pred HHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEE
Confidence 3445556667888666555544444444444 567777777888999999999999999999999999999999999862
Q ss_pred chhHHHHHHHHHHHHHHHH-HHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHH
Q 017535 141 SGRIILAQISSLSAIPLAA-LLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFES 219 (370)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 219 (370)
.++..+...... +....+...+ ..+.+.+..++.|++.+...+ ...+++.+.+|+++++++.++.+...+
T Consensus 86 -------~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (417)
T PRK10489 86 -------LLARGTCGLGFIGLALNAFLPEP-SLLAIYLLGLWDGFFGSLGVT-ALLAATPALVGRENLMQAGAITMLTVR 156 (417)
T ss_pred -------EehHHHHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHHHHHHHH-HHhhhhhhccCHHHHHHHHHHHHHHHh
Confidence 222111111111 1111111122 234455566666776666555 667788899999999999999999999
Q ss_pred HhhchhhHHHHHHHHhh
Q 017535 220 ILSSFAPPVVGILAQHV 236 (370)
Q Consensus 220 ~~~~~~~~~~g~l~~~~ 236 (370)
+|..+||.+.|.+.+..
T Consensus 157 ~g~~~g~~l~g~l~~~~ 173 (417)
T PRK10489 157 LGSVISPALGGLLIAAG 173 (417)
T ss_pred HHHHhHHHHHHHHHHHH
Confidence 99999999999998875
No 92
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.52 E-value=5.9e-12 Score=112.03 Aligned_cols=163 Identities=17% Similarity=0.213 Sum_probs=111.2
Q ss_pred HHhhhccchHHHHHHHHHhhhhhhHHH-HHHHHHHHHHhC-CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCch
Q 017535 65 EAKSVIKIPSFQIIVAQGVTGSFPWSA-LSFAAMWLELTG-FSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSG 142 (370)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g-~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~ 142 (370)
+..+++|+|.+..+++..++....... .+|.+.|+++.| .+....+.+.++..++-++...+.+++..|+|.++.
T Consensus 199 ~~~~llk~~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~l--- 275 (400)
T PF03825_consen 199 DALKLLKNPRFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWL--- 275 (400)
T ss_pred HHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHH---
Confidence 345799999976666555555555444 478899998877 777888887777788888888888999999887754
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCCCChh-HHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHH-HHH
Q 017535 143 RIILAQISSLSAIPLAALLLLVLPDDPSTP-VMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSF-ESI 220 (370)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~ 220 (370)
+.++.+. ..+=..++....++.... +...+...+.|+..+.... ....++.+.+|++.|+++.++++.. ..+
T Consensus 276 ----l~~a~~~-~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~-a~~~yi~~~~p~~~~at~Q~l~~~~~~Gl 349 (400)
T PF03825_consen 276 ----LLLALVA-YAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHA-ASVRYIDRIAPPELRATAQGLYSALSFGL 349 (400)
T ss_pred ----HHHHHHH-HHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHH-HHHHHHHHhCCccchHHHHHHHHHHHhhH
Confidence 3333222 222222222221221111 1111212346666665555 5678889999999999999998876 468
Q ss_pred hhchhhHHHHHHHHhh
Q 017535 221 LSSFAPPVVGILAQHV 236 (370)
Q Consensus 221 ~~~~~~~~~g~l~~~~ 236 (370)
|+.+|..++|++.|+.
T Consensus 350 g~~iG~~igG~l~~~~ 365 (400)
T PF03825_consen 350 GGAIGSLIGGWLYDAF 365 (400)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999999998
No 93
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.52 E-value=1.6e-12 Score=116.95 Aligned_cols=198 Identities=13% Similarity=0.138 Sum_probs=120.5
Q ss_pred ccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccccCcccchhhhhhHHHHhhhccchHHHHHH-HHHhhhhh
Q 017535 9 IPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIV-AQGVTGSF 87 (370)
Q Consensus 9 ~~gWr~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 87 (370)
..+||++|++.+++.++..++.. +.+.|+.++.+. ++ ....+..++++|+|.++... ..+++...
T Consensus 182 ~~~w~~~fl~~a~~~~~~~~~~~-~~~~p~~~~~~~--~~-----------~~~~~~~~~~~~~~~~~~~~l~~f~yvg~ 247 (410)
T TIGR00885 182 LASVQTPYMIIGAVVLAVALLIM-LTKMPALNHSDA--KQ-----------ISFSASLSRLARIRHYREGVIAQFFYVGV 247 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HhcCCCCCcccc--cc-----------ccchhhHHHHHhChhHHHHHHHHHHHHHH
Confidence 35799999999987776654443 334443211110 00 01112334677888865543 34444333
Q ss_pred hHHHHHHHHHHHHHh--CCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhC
Q 017535 88 PWSALSFAAMWLELT--GFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVL 165 (370)
Q Consensus 88 ~~~~~~~~~~~~~~~--g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (370)
.....++++.|.++. +.+....+...+....+..+|+++++++.||+++|+. ..+..+++..+..+... .
T Consensus 248 e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~-------l~i~~~~~~~~~ll~~~-~ 319 (410)
T TIGR00885 248 QIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKV-------LMAYAIIGMALCLGSIF-A 319 (410)
T ss_pred HHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHH-------HHHHHHHHHHHHHHHHH-c
Confidence 345557889988543 4555555666666678889999999999999988865 23333333222222221 1
Q ss_pred CCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 166 PDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 166 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
. . . . ....+++.|++.+..+| ..++...+..+++.+..+.++... .+|+++.|.+.|++.|..
T Consensus 320 ~-~-~-~--~~~~l~~~glf~s~~fp-~i~sl~~~~~g~~~~~~s~~l~~~--~~Gga~~p~l~G~~~d~~ 382 (410)
T TIGR00885 320 G-G-H-V--GLYCLTLCSAFMSLMFP-TIYGIALKGLGQDTKYGAAGLVMA--IIGGGIVPPLQGFIIDMK 382 (410)
T ss_pred C-C-h-H--HHHHHHHHHHHHHHHHH-HHHHHHHhhhhhhhhhhHHHHHHH--HhccchHHHHHHHHHHHh
Confidence 1 1 1 1 23455566677776777 788888888887754444444443 399999999999999964
No 94
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.51 E-value=2.6e-12 Score=118.47 Aligned_cols=265 Identities=15% Similarity=0.196 Sum_probs=164.8
Q ss_pred CchhHHHHHHHHHHHHHHHHHHhcCCCCCCCC------CCC-CCc---cccCcccchhhhhhHHHHhhhccchHHHHHHH
Q 017535 11 GWRISFHIVGLISVVVGTLVRLFANDPHFPDG------GTA-NSD---QVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVA 80 (370)
Q Consensus 11 gWr~~f~i~~~~~~i~~~~~~~~~~~~~~~~~------~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (370)
.|..-|++.+.+.++.++..++++++.++..+ .+. +.+ .+.........++..+.++++++||.+...++
T Consensus 320 AWWlGFLi~g~~~~~~a~p~f~fPk~lp~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l 399 (735)
T KOG3626|consen 320 AWWLGFLICGALLLFSAVPLFFFPKELPKSQKRKRARDLHVLKTESGGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVL 399 (735)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcccCccccccchhhhhcccccccccccCCcchhhhHHHHHHHHHHHhcCchHHHHHH
Confidence 38889999999999999999888777332211 000 000 01122222344677888899999999887766
Q ss_pred HHhhhhhh-HHHHHHHHHHH-HHhCCCHHHHHHHHHHHHH-HHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHH
Q 017535 81 QGVTGSFP-WSALSFAAMWL-ELTGFSHEKTAFLMALFVI-ASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPL 157 (370)
Q Consensus 81 ~~~~~~~~-~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~-~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~ 157 (370)
..++.... .++.+|+|.|+ +++|.++..+..+.+...+ +..+|.+++|++..|+.-+.. ......++..++.+.+
T Consensus 400 ~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r--~~a~~~~~~~~l~l~~ 477 (735)
T KOG3626|consen 400 ASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSAR--GAAKFVIVCSVLSLLF 477 (735)
T ss_pred HHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHH--HHHHHHHHHHHHHHHH
Confidence 66655555 56669999999 8999999999999987765 667899999999998754432 1222223333333322
Q ss_pred HHHHHH-h------------------------------------------------------------------------
Q 017535 158 AALLLL-V------------------------------------------------------------------------ 164 (370)
Q Consensus 158 ~~~~~~-~------------------------------------------------------------------------ 164 (370)
....++ .
T Consensus 478 ~~~~~~igC~~~~~aG~~~~y~~~~~~~~~~~~~s~Cn~~C~C~~~~~~PVCg~~G~tY~SpChAGC~~~~~~~~~~~~y 557 (735)
T KOG3626|consen 478 YSLLFFIGCESSPVAGVTNSYEGSPAFTSHENPFSSCNSDCSCDTSEYEPVCGENGITYFSPCHAGCTESSGTSDGNTIY 557 (735)
T ss_pred HHHHHEecCCCCcccceecCCCCCCccccCCCchhhhhcCCCCCCcCcCcccCCCCCEEeChhhhCCcccccCCCCceee
Confidence 122211 1
Q ss_pred -----CC----CCC-----------ChhHHHHHHHHHHHH-HHHhcCCCCccchhccccCCCchhHHHHHHHHHHHH-hh
Q 017535 165 -----LP----DDP-----------STPVMHGLVLVVTGL-FISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESI-LS 222 (370)
Q Consensus 165 -----~~----~~~-----------~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~ 222 (370)
.+ ... ....+.+++++.++. ..+...+ +.+.++.+.++++.|..+.|+..++..+ |.
T Consensus 558 tnCsCv~~~~~~~~~a~~G~C~~~c~~~~~~Fl~~~~~~sf~~~~~~~-p~~~i~LR~V~~e~ks~AlG~~~~~irllg~ 636 (735)
T KOG3626|consen 558 TNCSCVPTNKNGNGSAKKGYCPNDCCRQFLIFLALFAIGSFIGALGAV-PGMLIVLRCVPPEEKSFALGFQWMLIRLLGF 636 (735)
T ss_pred ccccccccccCCCceeecCCCCCCcchhhHHHHHHHHHHHHHHHhccC-cceEEEEEccCchhchhhhHHHHHHHHHHhc
Confidence 00 000 000122333333333 3333334 5677788899999999999998887665 55
Q ss_pred chhhHHHHHHHHhhc-CCCCCCCCCCccchhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHH
Q 017535 223 SFAPPVVGILAQHVY-GFKPIPKGSSATEEIATDRANAASLAKALYTAIGIPMALCCFIYSF 283 (370)
Q Consensus 223 ~~~~~~~g~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (370)
+.+|++.|++.|..- -|... =+....|..++.+.+++.++.+..+.-.+.++.+++
T Consensus 637 IPsPIifG~~ID~tCl~W~~~-----C~~~GsC~iYd~~~lr~~y~gl~~~~~~~~~i~~i~ 693 (735)
T KOG3626|consen 637 IPSPIIFGAVIDTTCLLWGKS-----CGSRGSCLIYDNDSLRYRYLGLHIILKVIALILLII 693 (735)
T ss_pred CCchHhhhhhHhhHHHHhhcc-----cCCCCceeeechHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 789999999999851 11110 012456788899999987665544443444433333
No 95
>PRK10054 putative transporter; Provisional
Probab=99.51 E-value=1.8e-12 Score=116.31 Aligned_cols=147 Identities=14% Similarity=0.162 Sum_probs=103.1
Q ss_pred HHHHHHHHhhhhhh-HHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHH
Q 017535 75 FQIIVAQGVTGSFP-WSALSFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSL 152 (370)
Q Consensus 75 ~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~ 152 (370)
++.++...++.... +....++|.|+ +++|++..+.+++.+...++.+++.++.|+++||+|+|+. +.++..
T Consensus 9 ~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~-------~~~~~~ 81 (395)
T PRK10054 9 TSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRY-------MLLAIT 81 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchh-------HHHHHH
Confidence 44444444444444 44457889999 7899999999999999999999999999999999999875 233322
Q ss_pred HHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHH
Q 017535 153 SAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGIL 232 (370)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l 232 (370)
+... ..+.+. +. +. .+.+.+..++.+.+.+...+ ...++..+..|+++|+++.|+.+...++|.+++|.+.+++
T Consensus 82 ~~~~-~~~~~~-~~--~~-~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l 155 (395)
T PRK10054 82 AFAS-GFIAIP-LV--NN-VTLVVLFFALINCAYSVFST-VLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLL 155 (395)
T ss_pred HHHH-HHHHHH-HH--hH-HHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2221 111111 11 11 22233334444555444455 5678888999999999999999999999999999999988
Q ss_pred HH
Q 017535 233 AQ 234 (370)
Q Consensus 233 ~~ 234 (370)
.+
T Consensus 156 ~~ 157 (395)
T PRK10054 156 VM 157 (395)
T ss_pred HH
Confidence 75
No 96
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.49 E-value=2.7e-12 Score=113.30 Aligned_cols=182 Identities=23% Similarity=0.362 Sum_probs=131.3
Q ss_pred cccccccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccccCcccchhhhhhHHHHhhhccchHHHHHHH-HH
Q 017535 4 MTFMGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVA-QG 82 (370)
Q Consensus 4 ~~~~~~~gWr~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 82 (370)
+.+.+..+||+.|++.+++.++..++..+.. |.++.... .+
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------------~~~~~~~~~~~ 185 (352)
T cd06174 144 GLLAESLGWRWLFLILAILGLLLALLLLFLL--------------------------------------RLLLLLALAFF 185 (352)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH--------------------------------------HHHHHHHHHHH
Confidence 3455667899999998887777666554442 22233333 33
Q ss_pred hhhhhhHHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhC-CCchhHHHHHHHHHHHHHHHHH
Q 017535 83 VTGSFPWSALSFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARF-PNSGRIILAQISSLSAIPLAAL 160 (370)
Q Consensus 83 ~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 160 (370)
+..........+.|.++ +..|.+..+.+.+.....++..++.++.+++.||+++|+ . ...+..+.......
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-------~~~~~~~~~i~~~~ 258 (352)
T cd06174 186 LLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLL-------LLIGLLLAALGLLL 258 (352)
T ss_pred HHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHH-------HHHHHHHHHHHHHH
Confidence 33333344457888888 555999999999999999999999999999999999987 4 23333322222221
Q ss_pred HHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 161 LLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
+. .. .. .+...+..++.|++.+...+ ...+++.+..|+++|++..|+.+...+++..+++.+.|.+.+..
T Consensus 259 -~~-~~--~~-~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~ 328 (352)
T cd06174 259 -LA-LA--PS-LALLLVALLLLGFGLGFAFP-ALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTG 328 (352)
T ss_pred -HH-Hh--cc-HHHHHHHHHHHHHHHhccch-hHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 11 11 11 34456667778888887777 88999999999999999999999999999999999999999865
No 97
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.49 E-value=2.3e-12 Score=116.66 Aligned_cols=150 Identities=13% Similarity=0.093 Sum_probs=104.1
Q ss_pred HHHHHH-HHhhhhhhHHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHH-hhhCCCchhHHHHHHHH
Q 017535 75 FQIIVA-QGVTGSFPWSALSFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFL-SARFPNSGRIILAQISS 151 (370)
Q Consensus 75 ~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~~~~~~~ 151 (370)
++.++. ...-....|++..++|.|+ +.+|++..+++.+.+.+.+...++.+++|+++||+ |||+. ..++.
T Consensus 11 l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~-------iliG~ 83 (493)
T PRK15462 11 IYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMA-------VMLGA 83 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHH-------HHHHH
Confidence 444333 3333444466668999999 77899999999999999999999999999999999 99875 33333
Q ss_pred HHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCC--chhHHHHHHHHHHHHhhchhhHHH
Q 017535 152 LSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEK--SRTSVYAMDRSFESILSSFAPPVV 229 (370)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~ 229 (370)
++...... .+ ......... +.+.+....++.+...+ +..+++.+.+|++ .|.++.++..+..++|+.++|.+.
T Consensus 84 il~~lg~l-ll-~~~~~~~~~--~~l~l~li~iG~G~~~~-~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~ 158 (493)
T PRK15462 84 LLMAIGHV-VL-GASEIHPSF--LYLSLAIIVCGYGLFKS-NVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIAC 158 (493)
T ss_pred HHHHHHHH-HH-HHhhcchhH--HHHHHHHHHHhcccccc-cHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHH
Confidence 33322211 11 111111111 22222233344455555 6678899999875 699999999999999999999999
Q ss_pred HHHHHhh
Q 017535 230 GILAQHV 236 (370)
Q Consensus 230 g~l~~~~ 236 (370)
|++.+..
T Consensus 159 g~L~~~~ 165 (493)
T PRK15462 159 GYAQEEY 165 (493)
T ss_pred HHHHhhh
Confidence 9998876
No 98
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.49 E-value=1.8e-12 Score=118.77 Aligned_cols=155 Identities=14% Similarity=0.149 Sum_probs=112.6
Q ss_pred hccchH-HHHHHHHHhhhhh-hHHHHHHHHHHH-HH--hCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHH-HhhhCCCch
Q 017535 69 VIKIPS-FQIIVAQGVTGSF-PWSALSFAAMWL-EL--TGFSHEKTAFLMALFVIASSLGGLFGGRMGDF-LSARFPNSG 142 (370)
Q Consensus 69 ~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~-~~--~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr-~~~~~~~~~ 142 (370)
.+++|. ++.++...++... .|+...++|.|+ +. +|++..+++.+.+.+.++..++.+++|+++|| +|||+.
T Consensus 5 ~~~~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~--- 81 (475)
T TIGR00924 5 FFGHPKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKT--- 81 (475)
T ss_pred ccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHH---
Confidence 345555 5555544444444 456668999999 55 89999999999999999999999999999999 799976
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCc---hhHHHHHHHHHHH
Q 017535 143 RIILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKS---RTSVYAMDRSFES 219 (370)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~ 219 (370)
+.++..+..+.. ..+. ... . .+.+.+..++.|++.+...| ...+++.+.+|++. |+++.++.+...+
T Consensus 82 ----l~~~~~~~~~g~-~~~~-~~~--~-~~~~~~~~~l~g~g~g~~~~-~~~~~~a~~~~~~~~~~r~~~~~~~~~~~n 151 (475)
T TIGR00924 82 ----MVLGGIVLMLGH-FMLA-MSI--Y-PDLIFYGLGTIAVGSGLFKA-NPSSMVGKLYERGDMPRRDGGFTLFYMSIN 151 (475)
T ss_pred ----HHHHHHHHHHHH-HHHH-hcc--c-HhHHHHHHHHHHhccccccC-CHHHHHHHhcCCCCcccccceehhHHHHHH
Confidence 333333332222 2111 221 1 22344555667777777777 77888888887653 8889999999999
Q ss_pred HhhchhhHHHHHHHHhh
Q 017535 220 ILSSFAPPVVGILAQHV 236 (370)
Q Consensus 220 ~~~~~~~~~~g~l~~~~ 236 (370)
+|..+||.+.|++.+..
T Consensus 152 iG~~ig~~l~g~l~~~~ 168 (475)
T TIGR00924 152 IGSFISPLLAGVIAENY 168 (475)
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 99999999999998876
No 99
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.48 E-value=2e-12 Score=114.95 Aligned_cols=135 Identities=11% Similarity=0.116 Sum_probs=103.8
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHH-HHHhCCCCCCh
Q 017535 93 SFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAAL-LLLVLPDDPST 171 (370)
Q Consensus 93 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 171 (370)
..+|.|..+.+.+..+.+++.+...++.+++.++.|+++||+|||+. ...+..+....... .+..... ...
T Consensus 20 ~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~-------~~~~~~~~~~~~~~~~~~~~~~-~~~ 91 (365)
T TIGR00900 20 VALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKV-------MIGADLIRAVLVAVLPFVALLG-GLN 91 (365)
T ss_pred HHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHH-------HHHHHHHHHHHHHHHHHHHHcC-CCc
Confidence 45677777789999999999999999999999999999999999976 23332222211111 1111111 123
Q ss_pred hHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 172 PVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 172 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
.+.+.+..++.|++.+...+ ...+++.+.+|+++|+++.++.+....+|..++|.+.+.+.+..
T Consensus 92 ~~~~~~~~~l~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~ 155 (365)
T TIGR00900 92 IWQVYVLAGILAIAQAFFTP-AYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATL 155 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 45566677778888887777 77899999999999999999999999999999999999998876
No 100
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.48 E-value=1.6e-11 Score=115.99 Aligned_cols=269 Identities=15% Similarity=0.183 Sum_probs=157.6
Q ss_pred chhHHHHHHHHHHHHHHHHHHhcCC-CCCCCCCC--CCCccc----cC---cccchhhhhhHHHHhhhccchHHHHHHHH
Q 017535 12 WRISFHIVGLISVVVGTLVRLFAND-PHFPDGGT--ANSDQV----SS---KSFRSDVKVLIQEAKSVIKIPSFQIIVAQ 81 (370)
Q Consensus 12 Wr~~f~i~~~~~~i~~~~~~~~~~~-~~~~~~~~--~~~~~~----~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (370)
||..|++.++++++.++++++++++ |+.....+ ..+.+. .. .......++..+.++.+++||.++...+.
T Consensus 259 Wwl~Fli~g~l~~l~~v~l~~~p~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~ 338 (633)
T TIGR00805 259 WWIGFLICGGVALLTSIPFFFFPKALPKEGKRVNVDVHETEKLEKSEDKSRKKNSDITKDFPKIIKRLLCNPIYMLVILA 338 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCccccCCcccccchhhhhhhcccccccccchhhhhhHHHHHHHHHHHHcCcHHHHHHHH
Confidence 8888999998888877766655544 32211110 000000 00 00001123455677889999997776555
Q ss_pred Hhhh-hhhHHHHHHHHHHH-HHhCCCHHHHHHHHHHHHH-HHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHH
Q 017535 82 GVTG-SFPWSALSFAAMWL-ELTGFSHEKTAFLMALFVI-ASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLA 158 (370)
Q Consensus 82 ~~~~-~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~-~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (370)
.++. ...+++.+|+|.|+ +.+|+++.+++++.++..+ +.++|.+++|+++||++.+... .+...++..++.+...
T Consensus 339 ~~~~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~--~~~~~~~~~~~~~~~~ 416 (633)
T TIGR00805 339 QVIDSLAFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKK--AAYFAICLSTLSYLLC 416 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccHHH--HHHHHHHHHHHHHHHH
Confidence 4444 44466778999999 7899999999999888766 6789999999999998754321 1122222222221111
Q ss_pred H-HHHHh----------------------CC---------CC--------------------------------------
Q 017535 159 A-LLLLV----------------------LP---------DD-------------------------------------- 168 (370)
Q Consensus 159 ~-~~~~~----------------------~~---------~~-------------------------------------- 168 (370)
. .+++. .. ..
T Consensus 417 ~~~~~~~C~~~~~agv~~~y~~~~~~~~~~~~Cn~~C~C~~~~~~PVCg~~~~tY~SpC~AGC~~~~~~~~~~~y~~CsC 496 (633)
T TIGR00805 417 SPLFLIGCESAPVAGVNNPSTDQSIYVENPTDCNRQCSCDSSFFDPVCGDNGLAYLSPCHAGCSMSVGTGSNMVYTNCSC 496 (633)
T ss_pred HHHHeecCCCCccceeeccCCCcccCCCChhccCCCCCCCCCCcccccCCCCCEEECccccCCCCccCCCCcceeccccc
Confidence 1 00000 00 00
Q ss_pred ----------------C-Ch-hHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHh-hchhhHHH
Q 017535 169 ----------------P-ST-PVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESIL-SSFAPPVV 229 (370)
Q Consensus 169 ----------------~-~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~ 229 (370)
. .. ...+.+.+++..+..+.... +....+.+.+|+++|+.+.|+..++..+- ...+|++.
T Consensus 497 i~~~~~~~a~~g~C~~~C~~~~~~f~~~~~~~~~~~~~~~~-p~~~i~lR~V~~~~rs~alg~~~~~~rllg~iP~pi~f 575 (633)
T TIGR00805 497 VQTPGNSSAKKGLCNPPCATSLLYFLILFIPLSFIAFITAV-PLYMVLLRVVNPEEKSLAIGLQWLCMRVFATIPAPILF 575 (633)
T ss_pred ccCCCCCCCcCCCCCcccchhHHHHHHHHHHHHHHHHhccC-chheEEeeccCcccchHHhhHHHHHHHHhcCCChhHHH
Confidence 0 00 11222233333333333334 45667778899999999999988877654 58899999
Q ss_pred HHHHHhhcC-CCCCCCCCCccchhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 017535 230 GILAQHVYG-FKPIPKGSSATEEIATDRANAASLAKALYTAIGIPMALCCFIYSFLYST 287 (370)
Q Consensus 230 g~l~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (370)
|++.|..-- |+.. .-+....|..++...+++.+..+....-+++.++++..++.
T Consensus 576 G~~iD~sC~~W~~~----~cg~~g~C~~Yd~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 630 (633)
T TIGR00805 576 GLLIDVSCLHWQTL----CCGARGACRMYDNDNLRNIYLGLTIALRGSGLLLLFFILIL 630 (633)
T ss_pred hhhhhchhheeccc----cCCCCCceeeechHHHHHHHHHHHHHHHHHHHHHHHHHHhe
Confidence 999998611 1110 00234678888999998888766544444555444444443
No 101
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.48 E-value=3.4e-12 Score=116.31 Aligned_cols=132 Identities=16% Similarity=0.187 Sum_probs=94.4
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCChhH
Q 017535 94 FAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPV 173 (370)
Q Consensus 94 ~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (370)
..| ++++.|+++.+.+++.+...++..++.++.|+++||+|+|+. ..++.++....... ....+.......
T Consensus 49 ~~p-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~-------~~~~~~~~~~~~~~-~~~~~~~~~~~~ 119 (438)
T TIGR00712 49 AMP-YLVEQGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVF-------LPAGLILSAAVMLL-MGFVPWATSSIA 119 (438)
T ss_pred hhH-HHHHcCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCcee-------hHHHHHHHHHHHHH-HhccccccchHH
Confidence 344 444469999999999999999999999999999999998876 23332222222111 111111112234
Q ss_pred HHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHh
Q 017535 174 MHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQH 235 (370)
Q Consensus 174 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~ 235 (370)
.+.+..++.|++.+...+ .....+.+.+|+++|++++++.+....+++.+++.+.+.+.+.
T Consensus 120 ~l~~~~~l~g~~~g~~~~-~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~ 180 (438)
T TIGR00712 120 IMFVLLFLNGWFQGMGWP-PCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAW 180 (438)
T ss_pred HHHHHHHHHHHHhhcchH-HHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHH
Confidence 455556677777776666 5677888899999999999999999999999999888766554
No 102
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.47 E-value=6.6e-12 Score=112.90 Aligned_cols=149 Identities=13% Similarity=0.151 Sum_probs=110.2
Q ss_pred hHHHHHHHHHhhhhhhHHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHH
Q 017535 73 PSFQIIVAQGVTGSFPWSALSFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISS 151 (370)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 151 (370)
++.+.+...++.....+....++|.|+ +++|+++.+.|++.+...+...+..+++|+++||+++|+. +..+.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~-------l~~~~ 83 (400)
T PRK11646 11 GKYFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPM-------IVTGM 83 (400)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHH-------HHHHH
Confidence 334444444454445556667888888 8899999999999999999999999999999999998865 33333
Q ss_pred HHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHH
Q 017535 152 LSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGI 231 (370)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~ 231 (370)
.+....... .. .. + ..+.+.+..++.|++.+...| ...+++.+.+|+++|+++.|+.+...++|..+||.+.|+
T Consensus 84 ~~~~~~~~~-~~-~~--~-~~~~l~~~~~l~g~~~~~~~~-~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~ 157 (400)
T PRK11646 84 LMRAAGFAT-MA-IA--H-EPWLLWLSCILSGLGGTLFDP-PRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSW 157 (400)
T ss_pred HHHHHHHHH-HH-Hh--c-cHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333222222 21 11 2 244455666777877766666 667888899999999999999999999999999999999
Q ss_pred HHH
Q 017535 232 LAQ 234 (370)
Q Consensus 232 l~~ 234 (370)
+.+
T Consensus 158 l~~ 160 (400)
T PRK11646 158 LLQ 160 (400)
T ss_pred HHH
Confidence 983
No 103
>TIGR00898 2A0119 cation transport protein.
Probab=99.46 E-value=5e-12 Score=117.53 Aligned_cols=152 Identities=17% Similarity=0.046 Sum_probs=90.9
Q ss_pred HHhhhccchHHHHHHHHHhhhhhhHHHHHH-HHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchh
Q 017535 65 EAKSVIKIPSFQIIVAQGVTGSFPWSALSF-AAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGR 143 (370)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~ 143 (370)
.++.++++|.++...+.....+.......+ ++.++...+.+..... ...++..+++.++.+++.||+|||+.
T Consensus 315 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~~~~~~l~dr~grr~~---- 387 (505)
T TIGR00898 315 SFLDLFRTPNLRKTTLCLMMLWFTTAFSYYGLVLDLGNLGGNIYLDL---FISGLVELPAKLITLLLIDRLGRRYT---- 387 (505)
T ss_pred cHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHhccccccCCChHHHH---HHHHHHHHHHHHHHHHHHHHhCCHHH----
Confidence 456788888865544433333333222222 2333355666543332 34466778889999999999998865
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhc
Q 017535 144 IILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSS 223 (370)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 223 (370)
..+..++..... +.+...+.... +......++.+++.+...+ ..+.+..|.+|++.|+++.|+.+++..+|+.
T Consensus 388 ---~~~~~~~~~~~~-l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~ 460 (505)
T TIGR00898 388 ---MAASLLLAGVAL-LLLLFVPVDLY--FLRTALAVLGKFGITSAFQ-MVYLYTAELYPTVVRNLGVGVCSTMARVGSI 460 (505)
T ss_pred ---HHHHHHHHHHHH-HHHHHcCCCch--HHHHHHHHHHHHHHHHHHH-HHHHHhcccccHHHHhhhHhHHHHHHHHHHH
Confidence 233222222221 22222222211 2222333333444444444 5678889999999999999999999999999
Q ss_pred hhhHHHH
Q 017535 224 FAPPVVG 230 (370)
Q Consensus 224 ~~~~~~g 230 (370)
++|.+.+
T Consensus 461 i~p~i~~ 467 (505)
T TIGR00898 461 ISPFLVY 467 (505)
T ss_pred HHhHHHH
Confidence 9999988
No 104
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.45 E-value=1.1e-11 Score=112.82 Aligned_cols=134 Identities=20% Similarity=0.282 Sum_probs=102.9
Q ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCC
Q 017535 90 SALSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDP 169 (370)
Q Consensus 90 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (370)
....++|.+.+++|++..+.+++.+...++..++.++.|++.||+|+|+. ..++.++...... ... .. +
T Consensus 41 ~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~-------~~~~~~~~~~~~~-~~~-~~--~ 109 (434)
T PRK11663 41 SFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYF-------MGIGLIATGIINI-LFG-FS--S 109 (434)
T ss_pred hHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchh-------HHHHHHHHHHHHH-HHH-HH--h
Confidence 33456788888899999999999999999999999999999999999876 3333333222221 111 11 1
Q ss_pred ChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 170 STPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 170 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
..+.+.+..++.|++.+...+ ...+++.+.+|+++|+++.++.+...++|+.++|.+.+++.+..
T Consensus 110 -~~~~l~~~~~l~g~~~g~~~~-~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 174 (434)
T PRK11663 110 -SLWAFALLWVLNAFFQGWGWP-VCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHY 174 (434)
T ss_pred -HHHHHHHHHHHHHHHHHccch-HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 234455556667777777667 77888899999999999999999999999999999999988765
No 105
>TIGR00895 2A0115 benzoate transport.
Probab=99.44 E-value=6.9e-12 Score=112.85 Aligned_cols=134 Identities=19% Similarity=0.164 Sum_probs=102.5
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCChh
Q 017535 93 SFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTP 172 (370)
Q Consensus 93 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (370)
.+.|.+.+++|.+..+.+++.+...++.+++.++.|+++||+|||+. ..++..+....... .. .. . ..
T Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~-------~~~~~~~~~~~~~~-~~-~~--~-~~ 105 (398)
T TIGR00895 38 FAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRV-------LLWSILLFSVFTLL-CA-LA--T-NV 105 (398)
T ss_pred hhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHH-------HHHHHHHHHHHHHH-HH-Hc--c-ch
Confidence 44566668899999999999999999999999999999999998865 23332222222111 11 11 1 23
Q ss_pred HHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhhcCCC
Q 017535 173 VMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYGFK 240 (370)
Q Consensus 173 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~~g~~ 240 (370)
+.+.+..++.|++.+...+ ...+++.+.+|++.|+++.++.+....+|..+++.+.+++.+.. ||.
T Consensus 106 ~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-g~~ 171 (398)
T TIGR00895 106 TQLLILRFLAGLGLGGLMP-NLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVF-GWR 171 (398)
T ss_pred HHHHHHHHHHhcccccchh-hHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcc-cce
Confidence 4455667778887777777 77899999999999999999999999999999999999998876 544
No 106
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.43 E-value=7.2e-12 Score=114.96 Aligned_cols=150 Identities=13% Similarity=0.081 Sum_probs=109.4
Q ss_pred HHHHHHHH-hhhhhhHHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHH-HhhhCCCchhHHHHHHHH
Q 017535 75 FQIIVAQG-VTGSFPWSALSFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDF-LSARFPNSGRIILAQISS 151 (370)
Q Consensus 75 ~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr-~~~~~~~~~~~~~~~~~~ 151 (370)
++.++... .-....|+...+++.|+ +.+|++..+++++...+.....+..+++|+++|| +|||+. ..++.
T Consensus 16 ~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~-------~~~g~ 88 (489)
T PRK10207 16 FFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRT-------IVLGA 88 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHH-------HHHHH
Confidence 44444333 33444466668899999 7899999999998888887788888899999999 999986 34443
Q ss_pred HHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCC--chhHHHHHHHHHHHHhhchhhHHH
Q 017535 152 LSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEK--SRTSVYAMDRSFESILSSFAPPVV 229 (370)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~ 229 (370)
++..+......+ .... ...+.+..++.+++.+...| +..+++.+.+|++ +|+.++++..+..++|.+++|.++
T Consensus 89 ~~~~~g~~~~~~--~~~~--~~ll~~~~~l~~ig~g~~~~-~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~ 163 (489)
T PRK10207 89 IVLAIGYFMTGM--SLLK--PDLIFIALGTIAVGNGLFKA-NPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLA 163 (489)
T ss_pred HHHHHHHHHHHH--hccc--hhHHHHHHHHHHhccccccC-CHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHH
Confidence 333322222222 1111 12233456667888888787 7789999999876 457889999999999999999999
Q ss_pred HHHHHhh
Q 017535 230 GILAQHV 236 (370)
Q Consensus 230 g~l~~~~ 236 (370)
|++.+..
T Consensus 164 g~l~~~~ 170 (489)
T PRK10207 164 PVIADKF 170 (489)
T ss_pred HHHHHhh
Confidence 9998876
No 107
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.43 E-value=2.7e-11 Score=103.46 Aligned_cols=197 Identities=18% Similarity=0.235 Sum_probs=134.2
Q ss_pred CchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccccCcccchhhhhhHHHHhhhccchHHHH-HHHHHhhhhhhH
Q 017535 11 GWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQI-IVAQGVTGSFPW 89 (370)
Q Consensus 11 gWr~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 89 (370)
.||++|.+.+.+.+++.+... ..|.|+.+...++..+. ++. ...+++++|.++. .+..+++...-.
T Consensus 187 ~v~~pYl~~~~~lvll~v~~~-~~k~p~~~~~~~~~~~~----------~~~--~~~~l~~~~~~~~gvl~~FlYVG~Ev 253 (422)
T COG0738 187 SVQFPYLILAGLLVLLAVLIL-LSKLPDLQVAAPSLGAS----------GSA--GLSSLFQNKHLRLGVLAIFLYVGAEV 253 (422)
T ss_pred hhhhHHHHHHHHHHHHHHHHH-hccCCcCCccccccccc----------ccc--hHHHHHhChHHHHHHHHHHHHHhHHH
Confidence 499999998887776665543 33545433322211110 100 2347889999555 455666666666
Q ss_pred HHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCC
Q 017535 90 SALSFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDD 168 (370)
Q Consensus 90 ~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (370)
...+|++.|+ +..|.+..+++...+.+.++.++|++++.++..|+...+. ..+.......++....+ . .+
T Consensus 254 a~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~-------Laf~a~~~ill~~~~~l-~-~g 324 (422)
T COG0738 254 AIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKY-------LAFYALIAILLLLAVAL-I-GG 324 (422)
T ss_pred HHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHH-------HHHHHHHHHHHHHHHHH-h-cC
Confidence 6678999999 5589999999999999999999999999999999877765 33333333322222221 1 11
Q ss_pred CChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 169 PSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 169 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
.......++.|++.+..+| +.++...+..| + .....|..-.+..+|+++.|++.|++.|..
T Consensus 325 ----~v~~~~l~~ig~F~simfP-TIfslal~~l~-~-~ts~~s~~l~maivGGAiiP~l~G~i~d~~ 385 (422)
T COG0738 325 ----VVALYALFLIGLFNSIMFP-TIFSLALKNLG-E-HTSVGSGLLVMAIVGGAIIPPLQGVIADMF 385 (422)
T ss_pred ----hHHHHHHHHHHHHhHHHHH-HHHHHHHhccC-c-cccccceeeeeheecchHHHHHHHHHHHhh
Confidence 2244556778888888899 88888888888 3 344444555667889999999999999998
No 108
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.43 E-value=2e-11 Score=112.61 Aligned_cols=157 Identities=15% Similarity=0.123 Sum_probs=107.3
Q ss_pred hhccchH-HHHHHHHHhhhhhh-HHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHH-HhhhCCCchh
Q 017535 68 SVIKIPS-FQIIVAQGVTGSFP-WSALSFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDF-LSARFPNSGR 143 (370)
Q Consensus 68 ~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr-~~~~~~~~~~ 143 (370)
+.+++|. ++.++....+.... |....+++.|+ +++|++..+++.+.+.+........+++|+++|| +|+|+.
T Consensus 15 ~~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~---- 90 (500)
T PRK09584 15 NAFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRV---- 90 (500)
T ss_pred hhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHH----
Confidence 3556665 66555544444444 66668999999 8899999998888777665555666789999999 599875
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCc--hhHHHHHHHHHHHHh
Q 017535 144 IILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKS--RTSVYAMDRSFESIL 221 (370)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~ 221 (370)
..++.++..... ..+. .... ....+.+..++.|++.+...+ ...+++.+.+|++. ++.+.++.++..++|
T Consensus 91 ---~~~g~~~~~ig~-~l~~-~~~~--~~~~l~~~~~l~gig~g~~~~-~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG 162 (500)
T PRK09584 91 ---IMLGAIVLAIGY-ALVA-WSGH--DAGIVYMGMATIAVGNGLFKA-NPSSLLSTCYEKDDPRLDGAFTMYYMSINIG 162 (500)
T ss_pred ---HHHHHHHHHHHH-HHHH-Hhcc--cHHHHHHHHHHHHHhhhcccC-CHHHHHHHhcCCCchhhhhcchHHHHHHHHH
Confidence 333333322221 1111 1111 122344555667777777777 67788899887643 456788889999999
Q ss_pred hchhhHHHHHHHHhh
Q 017535 222 SSFAPPVVGILAQHV 236 (370)
Q Consensus 222 ~~~~~~~~g~l~~~~ 236 (370)
..++|.+.|++.+..
T Consensus 163 ~~~gp~i~g~l~~~~ 177 (500)
T PRK09584 163 SFFSMLATPWLAAKY 177 (500)
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999999876
No 109
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.43 E-value=5.1e-12 Score=113.85 Aligned_cols=157 Identities=15% Similarity=0.027 Sum_probs=112.8
Q ss_pred chHHHHHHHHHhhhhhhHHHH-HHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHH
Q 017535 72 IPSFQIIVAQGVTGSFPWSAL-SFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQI 149 (370)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~ 149 (370)
++++..+.+..+......++. ..+|.++ +++|.+..+.+++.+...++..++.++.|+++||+|||+. +.+
T Consensus 14 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~-------l~~ 86 (399)
T PRK05122 14 TLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKA-------VVF 86 (399)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcch-------HHH
Confidence 344445555444444444444 5788887 7899999999999999999999999999999999999987 333
Q ss_pred HHHHHHHHHHH-HHHhCCCCC--ChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhh
Q 017535 150 SSLSAIPLAAL-LLLVLPDDP--STPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAP 226 (370)
Q Consensus 150 ~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 226 (370)
+.++....... .+....... .....+.+..++.|++.+...+ ...+++.+.+|+++|+++.++......+|..+++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~ 165 (399)
T PRK05122 87 GLCGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGT-GSILWGIGRVGALHTGRVISWNGIATYGALAIGA 165 (399)
T ss_pred HHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcc-hHHHHHHhhcChhhhccchhhhhhhhhHHHHHHH
Confidence 33322211111 111111111 1234456677788888887777 6677778889999999999999988899999999
Q ss_pred HHHHHHHHhh
Q 017535 227 PVVGILAQHV 236 (370)
Q Consensus 227 ~~~g~l~~~~ 236 (370)
.+++.+.+..
T Consensus 166 ~l~~~l~~~~ 175 (399)
T PRK05122 166 PLGVLLYHWG 175 (399)
T ss_pred HHHHHHHHcc
Confidence 9999988865
No 110
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.43 E-value=1.5e-11 Score=112.71 Aligned_cols=160 Identities=18% Similarity=0.173 Sum_probs=121.5
Q ss_pred hhccchHHHHHHHHHhhhhhhHHHHHH-HHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHH
Q 017535 68 SVIKIPSFQIIVAQGVTGSFPWSALSF-AAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIIL 146 (370)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~ 146 (370)
..+|||.|..++...+...++..+... ++-++.+..-|+...+++.....+..++..+++|.++||++||+.
T Consensus 5 aplr~~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrri------- 77 (524)
T PF05977_consen 5 APLRNRNFRRLWIAQLISNLGDWMQTVALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRI------- 77 (524)
T ss_pred ccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHH-------
Confidence 467899988877777666666444433 344446667889999999999999999999999999999999987
Q ss_pred HHHHHHHHHHHHH-HHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchh
Q 017535 147 AQISSLSAIPLAA-LLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFA 225 (370)
Q Consensus 147 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 225 (370)
++.+-++...+.. +.++.. ......+.++++.++.|++.....| ...+++.+.+|+++...++++.+...++...+|
T Consensus 78 li~~~~~~~~~~~~L~~l~~-~~~~~~~~Ll~~~fl~g~~~a~~~P-A~~A~ip~lV~~~~L~~A~al~s~~~niar~iG 155 (524)
T PF05977_consen 78 LILSQLLRALVALLLAVLAF-FGLLSPWLLLILTFLLGIGSAFFNP-AWQAIIPELVPKEDLPAANALNSISFNIARIIG 155 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHH-hCcCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhccHhhHHHHHHHHHHHHHHHHhcc
Confidence 3333332222211 111111 2233356677788889998888888 899999999999999999999999999999999
Q ss_pred hHHHHHHHHhh
Q 017535 226 PPVVGILAQHV 236 (370)
Q Consensus 226 ~~~~g~l~~~~ 236 (370)
|.++|.+....
T Consensus 156 PalgG~Lva~~ 166 (524)
T PF05977_consen 156 PALGGILVAFF 166 (524)
T ss_pred chHHHHHHHHH
Confidence 99999999876
No 111
>PRK12382 putative transporter; Provisional
Probab=99.42 E-value=4.3e-12 Score=114.03 Aligned_cols=157 Identities=16% Similarity=0.076 Sum_probs=109.2
Q ss_pred chHHHHHHHHHhhhhhhHHH-HHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHH
Q 017535 72 IPSFQIIVAQGVTGSFPWSA-LSFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQI 149 (370)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~ 149 (370)
++.++.+....+......++ ...+|.++ +++|.|..+.+++.+...++..++.++.|+++||+|||+. +.+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~-------l~~ 86 (392)
T PRK12382 14 NFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRS-------ALQ 86 (392)
T ss_pred cccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHH-------HHH
Confidence 33333333333333333333 35677777 7899999999999999999999999999999999999976 333
Q ss_pred HHHHHHHHHHHH-HH-hCCC-CCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhh
Q 017535 150 SSLSAIPLAALL-LL-VLPD-DPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAP 226 (370)
Q Consensus 150 ~~~~~~~~~~~~-~~-~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 226 (370)
+.+......... .. ..+. ...+.+.+.+..++.|++.+...+ ...+++.+.+|+++|+++.++......++..++|
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~ 165 (392)
T PRK12382 87 GMLACGLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLT-GALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGA 165 (392)
T ss_pred HHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhhCCccccchhhhHHHHHHHHHHHHHH
Confidence 322222111111 11 1111 112345566677788887776666 5567778899999999999999998899999999
Q ss_pred HHHHHHHHhh
Q 017535 227 PVVGILAQHV 236 (370)
Q Consensus 227 ~~~g~l~~~~ 236 (370)
.+.+.+.+..
T Consensus 166 ~~~~~l~~~~ 175 (392)
T PRK12382 166 PLGLLLHSHF 175 (392)
T ss_pred HHHHHHHhcc
Confidence 9999888765
No 112
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.42 E-value=2e-11 Score=115.95 Aligned_cols=130 Identities=15% Similarity=0.068 Sum_probs=100.9
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCChhH
Q 017535 94 FAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPV 173 (370)
Q Consensus 94 ~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (370)
.+|.+.+++|++..+.+++.+...++.+++.+++|+++||+|||+. +++++++..+..++..+ . + ..+
T Consensus 189 ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~-------lii~lil~~i~~ll~af--a--~-s~~ 256 (742)
T TIGR01299 189 VLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQC-------LLICLSVNGFFAFFSSF--V--Q-GYG 256 (742)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHH-------HHHHHHHHHHHHHHHHH--H--h-hHH
Confidence 4555558899999999999999999999999999999999999976 23332222222222111 1 1 244
Q ss_pred HHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 174 MHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 174 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
.+.+..++.|++.+...+ ...+++.+.+|++.||...++.+++..+|.++++.++..+....
T Consensus 257 ~llv~R~l~G~g~g~~~p-~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~ 318 (742)
T TIGR01299 257 FFLFCRLLSGFGIGGAIP-IVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHY 318 (742)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 566677888888887777 88999999999999999999999999999999999888877655
No 113
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.41 E-value=1.9e-11 Score=110.25 Aligned_cols=131 Identities=17% Similarity=0.090 Sum_probs=101.4
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCChh
Q 017535 93 SFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTP 172 (370)
Q Consensus 93 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (370)
...|.+.+++|++..+.+++.+...++..++.++.|+++||+|||+. +.++.++....... .. .. + ..
T Consensus 33 ~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~-------~~~~~~~~~~~~~~-~~-~~--~-~~ 100 (405)
T TIGR00891 33 LVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLP-------MVTSIVLFSAGTLA-CG-FA--P-GY 100 (405)
T ss_pred HHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH-------HHHHHHHHHHHHHH-HH-Hh--c-cH
Confidence 44566668899999999999999999999999999999999999976 33332222222111 11 11 2 24
Q ss_pred HHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 173 VMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 173 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
+.+.+..++.|++.+...+ ...+++.+.+|+++|+.+.++.+....+|..+++.+.+.+.+..
T Consensus 101 ~~l~~~~~l~G~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~ 163 (405)
T TIGR00891 101 ITMFIARLVIGIGMGGEYG-SSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVW 163 (405)
T ss_pred HHHHHHHHHHHhhhhhhhH-HHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4566677888888777777 67888899999999999999999999999999999999888765
No 114
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.41 E-value=1e-12 Score=120.11 Aligned_cols=225 Identities=12% Similarity=-0.037 Sum_probs=131.2
Q ss_pred ccccccccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCcc----c-cCcccchhhhhhHHHHhhhccchHHHH
Q 017535 3 PMTFMGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQ----V-SSKSFRSDVKVLIQEAKSVIKIPSFQI 77 (370)
Q Consensus 3 g~~~~~~~gWr~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (370)
++.+.+.+|||..|++.+++.++..+ ..++.+|++.....+..+.+ . ......+..++..++.++.+++|.++.
T Consensus 178 ~G~l~~~~~~~~~f~~~a~l~ll~~~-~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~~ 256 (468)
T TIGR00788 178 GGPLLDKTLTRILFLITAALLLLQLF-VSNLSKERRAFVRPRIGTYLEMNMALLTLGVLANVKVQILGLRGAIQLLEIAK 256 (468)
T ss_pred HHHHHHhcCcchHHHHHHHHHHHHHH-HHHhcccccccccccccccchhhhhhhhhhHHHHHHHHHHHHHHHHhcHHHHH
Confidence 44566778999999999888777643 44555765311111100000 0 000000011333455666788888655
Q ss_pred HHHHHhh-hhhhHHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHH
Q 017535 78 IVAQGVT-GSFPWSALSFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAI 155 (370)
Q Consensus 78 ~~~~~~~-~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~ 155 (370)
.+++.++ .....+.....-.+. +..|+++...|++..+.+++.+++..+.+++.+|++.|+. ..++.++..
T Consensus 257 ~l~fifl~~~~~~~~~~~~f~~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~-------l~~~~~l~~ 329 (468)
T TIGR00788 257 PLIFIFLSYANLPGASGSVFCATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLL-------FGVTTLLYT 329 (468)
T ss_pred HHHHHHHHHhhcCCCCceeEEEEcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHH-------HHHHHHHHH
Confidence 3333222 111111110000122 5689999999999999999988898888888877776654 233222222
Q ss_pred HHHHHHHHh---CC--CCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHH
Q 017535 156 PLAALLLLV---LP--DDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVG 230 (370)
Q Consensus 156 ~~~~~~~~~---~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g 230 (370)
......... +. ......+.+....++.+++.+.... +...++++..|++.+|+.+|+.+.+.++|..+++.++|
T Consensus 330 ~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~-~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg 408 (468)
T TIGR00788 330 LSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFM-PFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGV 408 (468)
T ss_pred HHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHc-cHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHH
Confidence 111110000 00 0001112233334455555555555 66889999999999999999999999999999999999
Q ss_pred HHHHhh
Q 017535 231 ILAQHV 236 (370)
Q Consensus 231 ~l~~~~ 236 (370)
.+.+..
T Consensus 409 ~l~~~~ 414 (468)
T TIGR00788 409 LLMETI 414 (468)
T ss_pred HHHHHc
Confidence 999988
No 115
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.40 E-value=8.1e-12 Score=112.21 Aligned_cols=130 Identities=20% Similarity=0.169 Sum_probs=102.4
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCChhH
Q 017535 94 FAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPV 173 (370)
Q Consensus 94 ~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (370)
..|.+.+++|++..+.+++.+...++..++.++.|+++||+|||+. ..++..+.......... . . +.+
T Consensus 16 ~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~-------~~~~~~~~~~~~~~~~~-~---~-~~~ 83 (399)
T TIGR00893 16 AAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKT-------LAVFIVIWGVFTGLQAF-A---G-AYV 83 (399)
T ss_pred hHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCccee-------eHHHHHHHHHHHHHHHH-H---c-CHH
Confidence 3455558899999999999999999999999999999999999976 23333222222222111 1 1 245
Q ss_pred HHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 174 MHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 174 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
.+.+..++.|++.+...+ ...+++.+.+|+++|+.+.++.+....+|..+++.+.+.+.+..
T Consensus 84 ~~~~~~~l~g~~~~~~~~-~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 145 (399)
T TIGR00893 84 SLYILRVLLGAAEAPFFP-GIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHF 145 (399)
T ss_pred HHHHHHHHHHHHHHhhhh-HHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhC
Confidence 567777888888888777 78899999999999999999999999999999999999988776
No 116
>PRK10504 putative transporter; Provisional
Probab=99.40 E-value=1.5e-11 Score=113.24 Aligned_cols=149 Identities=14% Similarity=0.046 Sum_probs=109.3
Q ss_pred HHHHHHHHhhhhhh-HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHH
Q 017535 75 FQIIVAQGVTGSFP-WSALSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLS 153 (370)
Q Consensus 75 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~ 153 (370)
++.+....++.... +....++|.+.+++|.++.+.+++.+.+.++..++.++.|+++||+|||+. ...+..+
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~-------~~~~~~~ 84 (471)
T PRK10504 12 LWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNI-------FFTAIVL 84 (471)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHH-------HHHHHHH
Confidence 34443333333333 344467899888899999999999999899999999999999999999975 2222222
Q ss_pred HHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHH
Q 017535 154 AIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILA 233 (370)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~ 233 (370)
..... +... .. + ..+.+.+..++.|++.+...| ...+++.+.+|+++++++.++.+...+++..++|.+.|.+.
T Consensus 85 ~~~~~-~~~~-~~--~-~~~~l~~~~~l~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~ 158 (471)
T PRK10504 85 FTLGS-LFCA-LS--G-TLNELLLARVLQGVGGAMMVP-VGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLV 158 (471)
T ss_pred HHHHH-HHHH-Hh--C-CHHHHHHHHHHHHhhhHHHHH-HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 22111 1111 21 2 234456667788888777777 67888889999999999999999999999999999999998
Q ss_pred Hhh
Q 017535 234 QHV 236 (370)
Q Consensus 234 ~~~ 236 (370)
+..
T Consensus 159 ~~~ 161 (471)
T PRK10504 159 EYA 161 (471)
T ss_pred hhc
Confidence 875
No 117
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.40 E-value=1.3e-11 Score=110.59 Aligned_cols=131 Identities=12% Similarity=0.093 Sum_probs=100.9
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCChh
Q 017535 93 SFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTP 172 (370)
Q Consensus 93 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (370)
...|.+.+++|.+..+.+++.+...++..++.++.|+++||+|||+. ...+..+.......... . + ..
T Consensus 26 ~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~-------~~~~~~~~~~~~~~~~~--~--~-~~ 93 (385)
T TIGR00710 26 PAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPV-------LLLGLFIFALSSLGLAL--S--N-NI 93 (385)
T ss_pred ccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHH-------HHHHHHHHHHHHHHHHH--H--c-cH
Confidence 35566668899999999999999999999999999999999999865 33333222222222111 1 1 23
Q ss_pred HHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 173 VMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 173 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
+.+.+..++.|++.+...+ ...+++.|.+|+++|+++.++.+....++..++|.+.+.+.+..
T Consensus 94 ~~~~~~~~l~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 156 (385)
T TIGR00710 94 ETLLVLRFVQAFGASAGSV-ISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWL 156 (385)
T ss_pred HHHHHHHHHHHcchhHHHH-HHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 4456667777877776666 67888999999999999999999999999999999999888865
No 118
>PRK03545 putative arabinose transporter; Provisional
Probab=99.40 E-value=1.8e-11 Score=109.96 Aligned_cols=131 Identities=7% Similarity=-0.017 Sum_probs=100.7
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCChh
Q 017535 93 SFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTP 172 (370)
Q Consensus 93 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (370)
..+|.+.+++|.++.+.++..+.+.++..++.++.|++.||+|||+. +..+..+......... .. + +.
T Consensus 30 ~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~-------~~~~~~~~~~~~~~~~--~~--~-~~ 97 (390)
T PRK03545 30 GLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKL-------LIGLFVLFIASHVLSA--LA--W-NF 97 (390)
T ss_pred cchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHH-------HHHHHHHHHHHHHHHH--Hh--c-cH
Confidence 34677778999999999999999999999999999999999999976 3333332222222211 11 2 24
Q ss_pred HHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 173 VMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 173 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
+.+.+..++.|++.+...+ ...+++.+..|+++|+.+.|+......++..++|.+.+.+.+..
T Consensus 98 ~~l~~~r~~~G~~~~~~~~-~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~ 160 (390)
T PRK03545 98 TVLLISRIGIAFAHAIFWS-ITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYL 160 (390)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHh
Confidence 4456666777877766666 66788899999999999999999999999999999999988775
No 119
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.40 E-value=3e-11 Score=109.13 Aligned_cols=142 Identities=13% Similarity=0.026 Sum_probs=103.6
Q ss_pred HHhhhhhhHHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHH
Q 017535 81 QGVTGSFPWSALSFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAA 159 (370)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (370)
.+.+.+.......+....+ +++|++..+.+++.+.+.++..++.++.|+++||+|||+. +..+.++.....
T Consensus 16 ~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~-------~~~~~~~~~~~~- 87 (412)
T TIGR02332 16 LFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRW-------IAGIMVLWGIAS- 87 (412)
T ss_pred HHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHH-------HHHHHHHHHHHH-
Confidence 3333344333343333345 8999999999999999999999999999999999999976 233322222111
Q ss_pred HHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHh
Q 017535 160 LLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQH 235 (370)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~ 235 (370)
+... +. +. .+.+.+..++.|++.+...| ....++.+.+|+++|+.+.++.+....+|..+++.+.+++.+.
T Consensus 88 ~~~~-~~--~~-~~~l~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~ 158 (412)
T TIGR02332 88 TATM-FA--TG-PESLYLLRILVGIAEAGFLP-GILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILAL 158 (412)
T ss_pred HHHH-Hh--cC-HHHHHHHHHHHHHHHhhHHH-HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 1111 11 11 34466677888888887777 6677889999999999999999999999999999999988753
No 120
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.39 E-value=2.9e-11 Score=104.85 Aligned_cols=149 Identities=15% Similarity=0.111 Sum_probs=120.1
Q ss_pred HHHHHHHHhhhhhhHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHH
Q 017535 75 FQIIVAQGVTGSFPWSALSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSA 154 (370)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~ 154 (370)
+.+.+..|+.+...+.....+|...+++|.|...+|.+.+.+..+..++.++...+.+|+.||+. ++....+.
T Consensus 16 ~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~l-------Ll~~l~lF 88 (394)
T COG2814 16 LALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRL-------LLGLLALF 88 (394)
T ss_pred HHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHH-------HHHHHHHH
Confidence 44555666666666766678899999999999999999999999999999999999999999976 22222222
Q ss_pred HHHHHHHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHH
Q 017535 155 IPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQ 234 (370)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~ 234 (370)
. ..-+.... ..++..+.+..++.|+..|...+ ...+...+.+|+++|+++.+++.....++..+|.+++.++-|
T Consensus 89 i-~~n~l~al----Ap~f~~Ll~aR~~~g~a~G~f~~-i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~ 162 (394)
T COG2814 89 I-VSNLLSAL----APSFAVLLLARALAGLAHGVFWS-IAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQ 162 (394)
T ss_pred H-HHHHHHHH----hccHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 1 22121111 22356688889999998888888 889999999999999999999999999999999999999999
Q ss_pred hh
Q 017535 235 HV 236 (370)
Q Consensus 235 ~~ 236 (370)
..
T Consensus 163 ~~ 164 (394)
T COG2814 163 LF 164 (394)
T ss_pred Hh
Confidence 88
No 121
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.37 E-value=3.9e-11 Score=107.87 Aligned_cols=131 Identities=12% Similarity=0.098 Sum_probs=98.0
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCChh
Q 017535 93 SFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTP 172 (370)
Q Consensus 93 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (370)
..+|.+.+++|.+..+.++..+...++..++.++.|+++||+|||+. +.++..+....... .. .. +. .
T Consensus 24 ~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~-------l~~~~~~~~i~~~~-~~-~~--~~-~ 91 (392)
T PRK10473 24 VGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPV-------AIPGAALFIIASLL-CS-LA--ET-S 91 (392)
T ss_pred hhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHH-------HHHHHHHHHHHHHH-HH-Hh--Cc-H
Confidence 56777778899999999999999999999999999999999999865 33333222222211 11 11 12 3
Q ss_pred HHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 173 VMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 173 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
+.+.+..++.|++.+...+ ...+++.+.+|+++|+++.++.+....++..++|.+.+.+.+..
T Consensus 92 ~~~~~~~~l~g~~~~~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~ 154 (392)
T PRK10473 92 SLFLAGRFLQGIGAGCCYV-VAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKF 154 (392)
T ss_pred HHHHHHHHHHHhhhhHHHH-HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 3345556667776666555 56788899999999999999999999999999999988877654
No 122
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.37 E-value=2.7e-11 Score=112.02 Aligned_cols=143 Identities=15% Similarity=0.074 Sum_probs=104.1
Q ss_pred HHhhhhhhHHHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHH
Q 017535 81 QGVTGSFPWSAL-SFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAA 159 (370)
Q Consensus 81 ~~~~~~~~~~~~-~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (370)
..+....-.+.. +-+|.+.+++|.+..+.+++.+.+.++..++.++.|+++||+|||+. +.++..+..+...
T Consensus 14 ~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~-------l~~~~~~~~~~~~ 86 (495)
T PRK14995 14 VYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRL-------LMLGGTLFGLASL 86 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH-------HHHHHHHHHHHHH
Confidence 333333333334 45788889999999999999999999999999999999999999976 3333333322222
Q ss_pred HHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhcccc-CCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 160 LLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIV-PEKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
... .. + +.+.+.+..++.|++.+...| .....+.+.+ |+++|+++.|+......+|..+||.++|++.+..
T Consensus 87 ~~~--~a--~-~~~~li~~r~l~G~g~~~~~~-~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~ 158 (495)
T PRK14995 87 AAA--FS--P-TASWLIATRALLAIGAAMIVP-ATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHF 158 (495)
T ss_pred HHH--Hc--C-CHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 211 11 2 244566677788888777666 4455555554 6788999999999999999999999999999876
No 123
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.37 E-value=3.5e-11 Score=108.01 Aligned_cols=135 Identities=13% Similarity=0.099 Sum_probs=104.9
Q ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCC
Q 017535 89 WSALSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDD 168 (370)
Q Consensus 89 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (370)
+.....+|.+.+++|+++.+.++..+...++..++.++.|+++||+|||+. ...+..+..... +... ..
T Consensus 37 ~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~-------~~~~~~~~~~~~-~~~~-~~-- 105 (394)
T PRK10213 37 FLPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYV-------VILFAVLLTLSC-LLVS-FA-- 105 (394)
T ss_pred HHHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHH-------HHHHHHHHHHHH-HHHH-HH--
Confidence 333346677778999999999999999999999999999999999999975 333333332222 2211 11
Q ss_pred CChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 169 PSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 169 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
...+.+.+..++.|++.+...+ ...+++.+.+|+++|+.+.++.....+++..++|.+.+.+.+..
T Consensus 106 -~~~~~l~~~r~l~G~~~g~~~~-~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~ 171 (394)
T PRK10213 106 -NSFSLLLIGRACLGLALGGFWA-MSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELI 171 (394)
T ss_pred -ChHHHHHHHHHHHHHhhHHHHH-HHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 2244566777888888777777 77888899999999999999999999999999999999998875
No 124
>PRK03699 putative transporter; Provisional
Probab=99.37 E-value=1.3e-10 Score=104.47 Aligned_cols=130 Identities=11% Similarity=0.104 Sum_probs=99.2
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCChh
Q 017535 93 SFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTP 172 (370)
Q Consensus 93 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (370)
..+|.+.+++|++..+.+++.+...++..++.++.|++.||+|+|+. +..+..+....... .. .. ...
T Consensus 28 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~-------~~~~~~~~~i~~~l-~~-~~---~~~ 95 (394)
T PRK03699 28 MVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQ-------LIFGFALMILAVAG-LM-FS---HSL 95 (394)
T ss_pred hhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHH-------HHHHHHHHHHHHHH-HH-Hc---chH
Confidence 56777778899999999999999999999999999999999999975 33332222221111 11 11 224
Q ss_pred HHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHh
Q 017535 173 VMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQH 235 (370)
Q Consensus 173 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~ 235 (370)
+.+.+..++.|++.+...+ ...+++.+.+|+++|+.+.++.+....+++.++|.+.+.+.+.
T Consensus 96 ~~~~~~~~l~G~~~g~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 157 (394)
T PRK03699 96 ALFSIAMFVLGVVSGITMS-IGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLAR 157 (394)
T ss_pred HHHHHHHHHHHHhhHhhcc-chhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4456667788887777776 6788888999988999999999888889999999998887764
No 125
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.36 E-value=9.1e-11 Score=105.24 Aligned_cols=155 Identities=14% Similarity=0.073 Sum_probs=105.0
Q ss_pred hccchHHHHHHHHHhhhhhhHHHHHH-HHHHHH-HhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHH
Q 017535 69 VIKIPSFQIIVAQGVTGSFPWSALSF-AAMWLE-LTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIIL 146 (370)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~ 146 (370)
...+|.++.....+..++..+....- .+.+-+ ++|+|..+.+++.++..+++.++++..|++.||+|.|+.
T Consensus 30 ~~a~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v------- 102 (462)
T PRK15034 30 HIARRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRW------- 102 (462)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHH-------
Confidence 33456666666666666666655543 344444 799999999999999999999999999999999999976
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhh
Q 017535 147 AQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAP 226 (370)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 226 (370)
..++..+..+..........+...+...+.++.++.|++ +...+ .....+.+.+|+++||++.|+....+++|..+++
T Consensus 103 ~~~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~-~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~ 180 (462)
T PRK15034 103 TVFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFA-SSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQ 180 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHH-HHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHH
Confidence 233323222222211111111112355677777788876 44555 6678888899999999999999777777776665
Q ss_pred HHHHHH
Q 017535 227 PVVGIL 232 (370)
Q Consensus 227 ~~~g~l 232 (370)
.+...+
T Consensus 181 ~l~p~~ 186 (462)
T PRK15034 181 LVAPLV 186 (462)
T ss_pred HHHHHH
Confidence 555443
No 126
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.36 E-value=2.1e-10 Score=105.59 Aligned_cols=129 Identities=9% Similarity=0.047 Sum_probs=90.8
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCChh
Q 017535 93 SFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTP 172 (370)
Q Consensus 93 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (370)
.+.|.+.+++|++..+.+++.+...++..++.++.|+++||+|+|+. ...+.++..+.... .. .. .. .
T Consensus 57 ~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~-------~~~~~~~~~~~~~~-~~-~~--~s-~ 124 (476)
T PLN00028 57 PLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYG-------SAFLLMLTAPAVFC-MS-LV--SS-A 124 (476)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHH-------HHHHHHHHHHHHHH-HH-Hh--cC-H
Confidence 34556668999999999999888899999999999999999999965 22222222211111 11 11 12 3
Q ss_pred HHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHh
Q 017535 173 VMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQH 235 (370)
Q Consensus 173 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~ 235 (370)
..+.+..++.|++.+...+ ...++.+.+|+++||.+.|+.+...++|+.+++.+.+.+...
T Consensus 125 ~~l~~~r~l~G~~~~~~~~--~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~ 185 (476)
T PLN00028 125 TGFIAVRFFIGFSLATFVS--CQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPL 185 (476)
T ss_pred HHHHHHHHHHHHHHHhhHH--HHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444556677776654333 345678889999999999999998899998888877766554
No 127
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.35 E-value=4.6e-11 Score=106.92 Aligned_cols=135 Identities=11% Similarity=0.075 Sum_probs=101.9
Q ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCC
Q 017535 89 WSALSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDD 168 (370)
Q Consensus 89 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (370)
+.....+|.+.+++|++..+.+++.+...++..++.++.|++.||+|+|+. ..++..+..... +... ..
T Consensus 20 ~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~-------~~~~~~~~~~~~-~l~~-~~-- 88 (382)
T PRK10091 20 FGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHI-------LLFLVALCVIGN-AMFT-LS-- 88 (382)
T ss_pred HHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHH-------HHHHHHHHHHHH-HHHH-Hh--
Confidence 444456777778999999999999999999999999999999999999876 333333322222 2221 11
Q ss_pred CChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 169 PSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 169 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
+ +.+.+.+..++.|++.+...+ ...+.+.+..|+++|+.+.++......++..++|.+.+++.+..
T Consensus 89 ~-~~~~l~~~r~l~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~ 154 (382)
T PRK10091 89 S-SYLMLAIGRLVSGFPHGAFFG-VGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEF 154 (382)
T ss_pred C-cHHHHHHHHHHHHhhhHHHHH-HHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhc
Confidence 2 244566677788887766555 55677788888888999999999999999999999999887765
No 128
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.35 E-value=1.1e-10 Score=106.77 Aligned_cols=126 Identities=16% Similarity=0.197 Sum_probs=88.4
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCChhH
Q 017535 94 FAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPV 173 (370)
Q Consensus 94 ~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (370)
.+|.+.++ |++..+.++..+...++..++.++.|+++||+|+|+. +.++.++.......... .+......+
T Consensus 51 ~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~-------l~~~~~~~~i~~~~~~~-~~~~~~~~~ 121 (452)
T PRK11273 51 AMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVF-------LPAGLILAAAVMLFMGF-VPWATSSIA 121 (452)
T ss_pred hhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchh-------HHHHHHHHHHHHHHHHh-hhcccccHH
Confidence 44544465 9999999999999999999999999999999999976 33333332222221111 111122244
Q ss_pred HHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHH
Q 017535 174 MHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVV 229 (370)
Q Consensus 174 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 229 (370)
.+.+..++.|++.+...+ .....+.+.+|+++|+++.|+.+....+|+.+.+.+.
T Consensus 122 ~~~~~~~l~gi~~g~~~~-~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~ 176 (452)
T PRK11273 122 VMFVLLFLCGWFQGMGWP-PCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLF 176 (452)
T ss_pred HHHHHHHHHHHHHhccch-HHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHH
Confidence 456666777887777666 5567778888999999999999999998875544443
No 129
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.35 E-value=4.1e-11 Score=107.98 Aligned_cols=150 Identities=13% Similarity=0.013 Sum_probs=102.8
Q ss_pred HHHHHhhhhhhHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHH
Q 017535 78 IVAQGVTGSFPWSALSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPL 157 (370)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~ 157 (370)
.+..++.....+....+++.+++++|.++.+.+++.+.+.++..++.++.|++.||+|||+. ...+..+....
T Consensus 19 ~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~-------l~~~~~~~~~~ 91 (402)
T TIGR00897 19 YIGVVVFMTGDGLEQGWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKT-------MMIGLLLWCVG 91 (402)
T ss_pred HHHHHHHHHhhhhHHHhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHH-------HHHHHHHHHHH
Confidence 33333333333444467788888899999999999999999999999999999999999976 33333322222
Q ss_pred HHHHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhh-chhhHHHHHHHHhh
Q 017535 158 AALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILS-SFAPPVVGILAQHV 236 (370)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~g~l~~~~ 236 (370)
...... .......++.+.+..++.|++.+...+ ...+.+.+.+|+++|++++|+.+...++|. .++|.+.+++.+..
T Consensus 92 ~~~~~~-~~~~~~~~~~l~~~~~i~G~g~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~ 169 (402)
T TIGR00897 92 HAAFIV-FGLGHANYPLILLFYGIRGLGYPLFAY-SFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAF 169 (402)
T ss_pred HHHHHH-HhccCccHHHHHHHHHHHHcchHHHHh-HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 111111 111111234445556666776665555 455667788899999999999999999986 57888888887765
No 130
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.35 E-value=3.7e-11 Score=107.80 Aligned_cols=148 Identities=18% Similarity=0.136 Sum_probs=106.9
Q ss_pred hHHHHHHHHHhhhhhh-HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHH
Q 017535 73 PSFQIIVAQGVTGSFP-WSALSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISS 151 (370)
Q Consensus 73 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 151 (370)
|.++.++...++.... .......+.+.++++.++.+.+++.+.+.+...+..++.|+++||++||+. +.++.
T Consensus 3 ~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~v-------l~~~~ 75 (393)
T PRK11195 3 KGFYAIMAAQFFSALADNALLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRV-------MFIAN 75 (393)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchh-------hHHHH
Confidence 4444444444444433 222334455568889999999999999999999999999999999999987 33333
Q ss_pred HHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHH
Q 017535 152 LSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGI 231 (370)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~ 231 (370)
.+........... .. . .+..++.|++.+...| ...+++.+.+|+++|++++|+.+....++..+||.++|+
T Consensus 76 ~~~~~~~~~~~~~----~~-~---~~~r~l~G~~~a~~~p-a~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~ 146 (393)
T PRK11195 76 GIKLLGCLLMLFG----IH-P---LLAYGLVGIGAAAYSP-AKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGA 146 (393)
T ss_pred HHHHHHHHHHHHH----HH-H---HHHHHHHHHHHHHHHH-HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3222111111111 11 1 3445677888888888 889999999999999999999999999999999999999
Q ss_pred HHHhh
Q 017535 232 LAQHV 236 (370)
Q Consensus 232 l~~~~ 236 (370)
+.+..
T Consensus 147 l~~~~ 151 (393)
T PRK11195 147 LADPH 151 (393)
T ss_pred HHHHH
Confidence 98853
No 131
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.35 E-value=5e-10 Score=102.82 Aligned_cols=157 Identities=15% Similarity=0.100 Sum_probs=98.2
Q ss_pred hhccch-HHHHHH-HHHhhhhhhHHHHHHHHHHH-HHhCCCHH---HHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCc
Q 017535 68 SVIKIP-SFQIIV-AQGVTGSFPWSALSFAAMWL-ELTGFSHE---KTAFLMALFVIASSLGGLFGGRMGDFLSARFPNS 141 (370)
Q Consensus 68 ~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~g~s~~---~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~ 141 (370)
+++|++ .+...+ ..++.+...+....+.|... ..++-++. ..+++..+..++..+|.++.|.+..++++-|.
T Consensus 304 ~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw-- 381 (599)
T PF06609_consen 304 RLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHIKW-- 381 (599)
T ss_pred HHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccchhH--
Confidence 577774 455543 34444444555556666665 56665543 56777778888889999999999988765443
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHh
Q 017535 142 GRIILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESIL 221 (370)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 221 (370)
.++++..+.......+...-+++.. . .....++.|++.++... +.....+-.+|++..|+++|+..+++.+|
T Consensus 382 ----~li~~~~~~ta~~Gama~~~~~n~~-~--~i~~~~l~g~giG~~~~-~~~~~~ql~~p~~~ig~a~gL~~s~R~~G 453 (599)
T PF06609_consen 382 ----QLIFGSVLMTAFCGAMAAVRPDNKN-A--AIAFLVLAGFGIGGILV-PAIVIAQLIVPDEDIGTATGLTGSIRSIG 453 (599)
T ss_pred ----HHHHHHHHHHHHHHHHHHccCCCcc-h--HHHHHHHHHHhHHHHHH-HHHHeeEeeeCchHHHHHHHHHHHHHHHh
Confidence 1223333332222222222222222 2 23344555666565554 45666677789999999999999999999
Q ss_pred hchhhHHHHHHHH
Q 017535 222 SSFAPPVVGILAQ 234 (370)
Q Consensus 222 ~~~~~~~~g~l~~ 234 (370)
+.+|..+...+..
T Consensus 454 GsIg~aIy~~I~~ 466 (599)
T PF06609_consen 454 GSIGYAIYNAIFT 466 (599)
T ss_pred hHHHHHHHHHHHH
Confidence 9999888766543
No 132
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.34 E-value=1.7e-11 Score=113.40 Aligned_cols=134 Identities=13% Similarity=0.128 Sum_probs=105.0
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCChh
Q 017535 93 SFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTP 172 (370)
Q Consensus 93 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (370)
...|.+.+++|.+..+.+++.+.+.++.+++.++.|+++||+|||+. ..++..+....... . ... + ..
T Consensus 23 ~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~-------~~~~~~~~~~~~~~-~-~~~--~-~~ 90 (485)
T TIGR00711 23 VAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRL-------FLISTFAFTLGSLL-C-GVA--P-NL 90 (485)
T ss_pred HHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHH-------HHHHHHHHHHHHHH-H-hCc--C-CH
Confidence 45677778999999999999999999999999999999999999975 33333332222211 1 121 2 24
Q ss_pred HHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhhcCCC
Q 017535 173 VMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYGFK 240 (370)
Q Consensus 173 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~~g~~ 240 (370)
..+.+..++.|++.+...+ ...+++.+.+|+++|+.+.++......+|..++|.+.|++.+.. +|.
T Consensus 91 ~~l~~~~~~~G~~~~~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-~w~ 156 (485)
T TIGR00711 91 ELMIIFRVIQGFGGGPLIP-LSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENY-HWR 156 (485)
T ss_pred HHHHHHHHHHHhhhhhHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCc-Cce
Confidence 4566777888888877777 77889999999999999999999999999999999999998875 544
No 133
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.34 E-value=6.8e-11 Score=106.83 Aligned_cols=131 Identities=13% Similarity=0.042 Sum_probs=99.3
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCChh
Q 017535 93 SFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTP 172 (370)
Q Consensus 93 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (370)
...|.+.+++|+++.+.+++.+...++..++.++.|+++||+|+|+. ..++..+....... .. .. . +.
T Consensus 36 ~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~-------~~~~~~~~~~~~~~-~~-~~--~-~~ 103 (406)
T PRK11551 36 VAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRI-------LIVSVALFGLFSLA-TA-QA--W-DF 103 (406)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchh-------HHHHHHHHHHHHHH-HH-Hh--c-cH
Confidence 44566668899999999999999999999999999999999999986 33333222222111 11 11 2 24
Q ss_pred HHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 173 VMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 173 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
+.+.+..++.|++.+...+ ...+++.+.+|+++|++++++.+....+|+.+++.+.+.+.+..
T Consensus 104 ~~~~~~~~l~G~~~~~~~~-~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 166 (406)
T PRK11551 104 PSLLVARLLTGVGLGGALP-NLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDA 166 (406)
T ss_pred HHHHHHHHHHHhhHHHHHH-HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
Confidence 4456677788887777666 67888999999999999999999999999999988877665543
No 134
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.34 E-value=9.3e-12 Score=100.83 Aligned_cols=154 Identities=18% Similarity=0.151 Sum_probs=108.5
Q ss_pred hHHHHHHHHH-hhhhhhHHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHH
Q 017535 73 PSFQIIVAQG-VTGSFPWSALSFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQIS 150 (370)
Q Consensus 73 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~ 150 (370)
|.+|.+.... ++....+.+++..|.++ +.+|+|+..++.+.+.....+.+.+++.|.++||.|++.. .+.+
T Consensus 264 ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~-------wv~~ 336 (459)
T KOG4686|consen 264 PPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLW-------WVAS 336 (459)
T ss_pred ccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceeh-------hHHH
Confidence 4455544444 33334455667788888 8899999999999999988999999999999999999865 2322
Q ss_pred HHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHH
Q 017535 151 SLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVG 230 (370)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g 230 (370)
..+.....-..+. +...+ -...+.++|+....... ..+.+++.++|.++.|+++|....+.++|-++.|++.|
T Consensus 337 a~~~tl~~H~~l~-Ft~ls-----Py~~m~~lGLsysllAc-slWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag 409 (459)
T KOG4686|consen 337 ACILTLLGHSGLF-FTFLS-----PYTSMTFLGLSYSLLAC-SLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAG 409 (459)
T ss_pred HHHHHHHHhhhHH-hhhcc-----HHHHHHHHhhhHHHHHH-HHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhh
Confidence 2222222211111 11111 12333445555444433 46778888999999999999999999999999999999
Q ss_pred HHHHhhcCCC
Q 017535 231 ILAQHVYGFK 240 (370)
Q Consensus 231 ~l~~~~~g~~ 240 (370)
.+.|..++|.
T Consensus 410 ~i~d~~g~y~ 419 (459)
T KOG4686|consen 410 FIADGDGSYD 419 (459)
T ss_pred eeecCCCchh
Confidence 9999886665
No 135
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.33 E-value=1.5e-10 Score=104.61 Aligned_cols=146 Identities=16% Similarity=0.195 Sum_probs=99.6
Q ss_pred HHHHHHhhhhhhHH-HHHHHHHHHHHhCCCHHH-----HHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHH
Q 017535 77 IIVAQGVTGSFPWS-ALSFAAMWLELTGFSHEK-----TAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQIS 150 (370)
Q Consensus 77 ~~~~~~~~~~~~~~-~~~~~~~~~~~~g~s~~~-----~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~ 150 (370)
.++...++....+. ...++|.+++++|.+..+ .+++.++..+...++.++.|+++||++||+. +..+
T Consensus 18 ~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~-------~~~~ 90 (408)
T PRK09874 18 VAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIM-------LLRS 90 (408)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHH-------HHHH
Confidence 33333333344433 336788888888888554 4788888899999999999999999999865 2332
Q ss_pred HHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHH
Q 017535 151 SLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVG 230 (370)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g 230 (370)
.......... +. .. . ..+.+.+..++.|++.+. .+ ....++.+..|+++|+.+.++.+....++..++|.+.+
T Consensus 91 ~~~~~~~~~~-~~-~~--~-~~~~~~~~~~~~g~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 163 (408)
T PRK09874 91 ALGMGIVMVL-MG-LA--Q-NIWQFLILRALLGLLGGF-VP-NANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGG 163 (408)
T ss_pred HHHHHHHHHH-HH-HH--h-hHHHHHHHHHHHHHhhhh-HH-hHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222221111 11 11 1 233455556666765443 45 55677788899999999999999999999999999999
Q ss_pred HHHHhh
Q 017535 231 ILAQHV 236 (370)
Q Consensus 231 ~l~~~~ 236 (370)
.+.+..
T Consensus 164 ~l~~~~ 169 (408)
T PRK09874 164 LLADSY 169 (408)
T ss_pred HHHHHh
Confidence 988865
No 136
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.33 E-value=5.3e-11 Score=105.95 Aligned_cols=147 Identities=14% Similarity=0.085 Sum_probs=102.4
Q ss_pred HHHHHHHhhhhhhH-HHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHH
Q 017535 76 QIIVAQGVTGSFPW-SALSFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLS 153 (370)
Q Consensus 76 ~~~~~~~~~~~~~~-~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~ 153 (370)
+..+..++.....+ ....+.|.++ +++|+++.+.+++.+...++.+++.++.|+++||+|+|+. ..++.++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~-------~~~~~~~ 76 (366)
T TIGR00886 4 FFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYT-------TTLSLLL 76 (366)
T ss_pred HHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHH-------HHHHHHH
Confidence 33344444444443 3336778656 8999999999999999999999999999999999999875 3333333
Q ss_pred HHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHH
Q 017535 154 AIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILA 233 (370)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~ 233 (370)
.......... . +...+.+.+..++.|++.+. .+ ...+++.+.+|+++|+.+.++.....++|..+++.+.+.+.
T Consensus 77 ~~i~~~~~~~-~---~~~~~~~~~~~~~~g~~~~~-~~-~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~ 150 (366)
T TIGR00886 77 LAIPCLWAGL-A---VQSYSVLLLLRLFIGIAGGS-FA-SCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPII 150 (366)
T ss_pred HHHHHHHHHH-H---hhhHHHHHHHHHHHHHhchh-hH-hHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 3222222111 1 10234455566677776443 34 45778889999999999999999888899888888887776
Q ss_pred Hh
Q 017535 234 QH 235 (370)
Q Consensus 234 ~~ 235 (370)
..
T Consensus 151 ~~ 152 (366)
T TIGR00886 151 GS 152 (366)
T ss_pred HH
Confidence 64
No 137
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.33 E-value=6.9e-11 Score=104.72 Aligned_cols=130 Identities=17% Similarity=-0.023 Sum_probs=97.4
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCChh
Q 017535 93 SFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTP 172 (370)
Q Consensus 93 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (370)
..+|.+.+++|++..+.+++.+.+.++..++.+..|+++||+|||+. .+.............. .. . ..
T Consensus 12 ~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~--------~~~~~~~~~~~~~~~~-~~--~-~~ 79 (368)
T TIGR00903 12 PVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWF--------LFGSLATFAAAAGRLL-DP--F-NY 79 (368)
T ss_pred hhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHH--------HHHHHHHHHHHHHHHH-Hh--c-cH
Confidence 45577778999999999999999999999999999999999997754 2222221111111111 11 1 35
Q ss_pred HHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 173 VMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 173 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
..+.+..++.|++.+.. + .....+.+.+|+++|+++.++.+....+|..+++.+.+++.+..
T Consensus 80 ~~l~~~R~l~G~g~~~~-~-~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~ 141 (368)
T TIGR00903 80 EWLLACQLLAALGQPFL-L-NAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAG 141 (368)
T ss_pred HHHHHHHHHHHhHhHHH-H-HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 56777788888887753 3 34556688899999999999999999999999999999988765
No 138
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.33 E-value=4.8e-11 Score=106.69 Aligned_cols=131 Identities=16% Similarity=0.149 Sum_probs=101.0
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCChh
Q 017535 93 SFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTP 172 (370)
Q Consensus 93 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (370)
..+|.+.+++|+++.+.+++.+...++..++.++.|+++||+|||+. +..+..+.......... . + ..
T Consensus 12 p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~-------~~~~~~~~~i~~~~~~~--~--~-~~ 79 (377)
T PRK11102 12 PALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPV-------ILGGTLVFALAAVACAL--A--Q-TI 79 (377)
T ss_pred ccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHH-------HHHHHHHHHHHHHHHHH--H--c-cH
Confidence 45677778899999999999999999999999999999999998865 33333332222222211 1 1 23
Q ss_pred HHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 173 VMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 173 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
+.+.+..++.|++.+...+ ...+++.+..|+++|+++.++.+....++..++|.+.+.+.+..
T Consensus 80 ~~~~~~~~l~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 142 (377)
T PRK11102 80 DQLIYMRFLHGLAAAAASV-VINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWF 142 (377)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 4456667777887776666 66788899999999999999999999999999999999988865
No 139
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.33 E-value=1.2e-11 Score=109.40 Aligned_cols=131 Identities=21% Similarity=0.249 Sum_probs=102.1
Q ss_pred HHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCCh
Q 017535 93 SFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPST 171 (370)
Q Consensus 93 ~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (370)
..+|.++ +++|.+..+.+++.+...++..++.++.|+++||+|+|+. ..++.++......+..+. ..
T Consensus 17 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~-------l~~~~~~~~~~~~~~~~~----~~- 84 (352)
T PF07690_consen 17 PALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRV-------LIIGLLLFALGSLLLAFA----SN- 84 (352)
T ss_dssp HHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHH-------HHHHHHHHHHHHHHHHHH----CC-
T ss_pred HHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeee-------EeehhhhhhhHHHHhhhh----hh-
Confidence 4556445 7899999999999999999999999999999999999975 333333333221222211 22
Q ss_pred hHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 172 PVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 172 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
.+.+.+..++.|++.+...+ ...+++.+.+|+++|+.+.++.+....+|..++|.+.+.+.+..
T Consensus 85 ~~~~~~~~~l~g~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~ 148 (352)
T PF07690_consen 85 FWLLLIARFLLGIGSGFFSP-ASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYF 148 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHC
T ss_pred HHHHhhhccccccccccccc-cccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhcc
Confidence 33677778888888877777 78999999999999999999999999999999999999988665
No 140
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.33 E-value=1.4e-10 Score=104.35 Aligned_cols=131 Identities=13% Similarity=0.062 Sum_probs=96.5
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCChh
Q 017535 93 SFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTP 172 (370)
Q Consensus 93 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (370)
..+|.+.+++|.++.+.+++.+...++..++.++.|+++||+|||+. +.++..+.......... . + ..
T Consensus 29 p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~-------~~~~~~~~~~~~~~~~~--~--~-~~ 96 (394)
T PRK11652 29 PAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPV-------ILVGMSIFILGTLVALF--A--H-SL 96 (394)
T ss_pred ccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHH-------HHHHHHHHHHHHHHHHH--H--c-cH
Confidence 34667778999999999999999999999999999999999999875 33333322222222111 1 1 23
Q ss_pred HHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 173 VMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 173 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
+.+.+..++.|++.+...+ ....+..+..++++++.+.++.+....++..++|.+.+.+.+..
T Consensus 97 ~~l~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~ 159 (394)
T PRK11652 97 TVLIAASAIQGLGTGVGGV-MARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLF 159 (394)
T ss_pred HHHHHHHHHHHhhhhHHHH-HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 4455666777776655444 45666778888888999999999999999999999999887765
No 141
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.32 E-value=6.5e-11 Score=107.69 Aligned_cols=130 Identities=18% Similarity=0.094 Sum_probs=99.0
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCChhH
Q 017535 94 FAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPV 173 (370)
Q Consensus 94 ~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (370)
..|.+.+++|.++.+.+++.+...++..++.++.|+++||+|||+. +.++.++..+....... . ...+
T Consensus 40 ~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~-------l~~~~~~~~~~~~~~~~--~---~~~~ 107 (426)
T PRK12307 40 IMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPL-------MMWSIVAYSVGTGLSGL--A---SGVI 107 (426)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHH-------HHHHHHHHHHHHHHHHH--H---hHHH
Confidence 3455558899999999999999999999999999999999999976 33333333222222111 1 1244
Q ss_pred HHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 174 MHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 174 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
.+.+..++.|++.+...+ ....++.+..|+++|+++.++......+|..+++.+.+.+.+..
T Consensus 108 ~l~~~r~l~G~g~g~~~~-~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~ 169 (426)
T PRK12307 108 MLTLSRFIVGMGMAGEYA-CASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAY 169 (426)
T ss_pred HHHHHHHHHHHHHhhHHH-HHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccC
Confidence 566777888888777676 67888899999999999999999999999999988888776654
No 142
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.32 E-value=1.2e-09 Score=95.92 Aligned_cols=162 Identities=11% Similarity=0.156 Sum_probs=110.6
Q ss_pred hHHHHhhhccchHHHHHHHHHhhhhhhHHHH-HHHHHHHHHh----CCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhh
Q 017535 62 LIQEAKSVIKIPSFQIIVAQGVTGSFPWSAL-SFAAMWLELT----GFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSA 136 (370)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~----g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~ 136 (370)
..++..+++|+|++|.+.+..+.....|... ...|.|+..+ +.+....|++.+...+..++...+..++.+|+|.
T Consensus 209 ~~~~~~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~ 288 (412)
T PF01306_consen 209 SLKDVLSLFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGA 288 (412)
T ss_dssp -HHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
T ss_pred cHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence 3566778999999888777666655555554 4567776443 3344667888888888889999999999999999
Q ss_pred hCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHH-H
Q 017535 137 RFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMD-R 215 (370)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~ 215 (370)
|+. ++++..+. .+= +....+..+ ++.+.+.-.+-++-...... ...-++.+.+|++..++...+. +
T Consensus 289 k~~-------Lllag~i~-~iR-i~~~~~~~~---~~~i~~~klLH~~e~~l~lv-a~fkYI~~~fd~rlsAt~y~v~~~ 355 (412)
T PF01306_consen 289 KNL-------LLLAGVIM-AIR-IIGSGFATN---PWVISLIKLLHALEFPLLLV-AAFKYITAHFDKRLSATLYLVGFQ 355 (412)
T ss_dssp HHH-------HHHHHHHH-HHH-HHHHHT--S---HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHS-GGGHHHHHHHHHT
T ss_pred HhH-------HHHHHHHH-HHH-HHHHhhhcc---hHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCCHhHHHHHHHHHHH
Confidence 975 23322222 121 222222222 34455666666665555444 5578888999999999999885 6
Q ss_pred HHHHHhhchhhHHHHHHHHhh
Q 017535 216 SFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 216 ~~~~~~~~~~~~~~g~l~~~~ 236 (370)
+..+++..+.+.+.|.+.|+.
T Consensus 356 ~~~~~~~~i~s~~~G~lyd~~ 376 (412)
T PF01306_consen 356 FAKQIGIIILSPLAGYLYDRI 376 (412)
T ss_dssp TTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhHHhhHhhc
Confidence 778899999999999999998
No 143
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.32 E-value=4.3e-11 Score=110.04 Aligned_cols=134 Identities=12% Similarity=0.027 Sum_probs=101.1
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHH-HHHHHhCCCCCCh
Q 017535 93 SFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLA-ALLLLVLPDDPST 171 (370)
Q Consensus 93 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 171 (370)
...|.+.+++|++..+.|++.+.+.++..++.++.|+++||+|+|+. +.++.++..... ...+.... ....
T Consensus 50 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~-------l~~~~~~~~~~~~~~~~~~~~-~~~~ 121 (467)
T PRK09556 50 AAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQF-------LPFLLILSAICMLGFGASLGS-GSVS 121 (467)
T ss_pred hhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccch-------HHHHHHHHHHHHHHHHHHHhc-ccch
Confidence 34676668999999999999999999999999999999999999986 232222221111 11111111 1223
Q ss_pred hHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHh
Q 017535 172 PVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQH 235 (370)
Q Consensus 172 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~ 235 (370)
.+.+.+..++.|++.+...| ...+++.+.+|+++||.+.|+......+|.++++.+..++.+.
T Consensus 122 ~~~l~~~r~l~G~~~~~~~~-~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~ 184 (467)
T PRK09556 122 LGLMIALWALSGFFQSTGGP-CSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANY 184 (467)
T ss_pred HHHHHHHHHHHHHHHhccch-HHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHh
Confidence 55667777888888887777 7788999999999999999999999999999998887776654
No 144
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.31 E-value=2.2e-10 Score=101.13 Aligned_cols=133 Identities=20% Similarity=0.195 Sum_probs=105.6
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCC
Q 017535 91 ALSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPS 170 (370)
Q Consensus 91 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (370)
.....|.+.++.|.+..+.+++.+...++..++.++.|+++||+|||+. ..++..+.......... . .
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~-------~~~~~~~~~~~~~~~~~--~---~ 85 (352)
T cd06174 18 LSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRV-------LLLGLLLFALGSLLLAF--A---S 85 (352)
T ss_pred hHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchh-------hHHHHHHHHHHHHHHHH--h---c
Confidence 3356788888889999999999999999999999999999999999986 34433333322222221 1 2
Q ss_pred hhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 171 TPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 171 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
..+.+.+..++.|++.+...+ ...+++.+..|+++|++..++.+....+|..++|.+.+.+.+..
T Consensus 86 ~~~~~~~~~~l~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 150 (352)
T cd06174 86 SLWLLLVGRFLLGLGGGALYP-AAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESL 150 (352)
T ss_pred cHHHHHHHHHHHHcccccccH-hHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 244566677788887777777 78899999999999999999999999999999999999998875
No 145
>PRK11043 putative transporter; Provisional
Probab=99.31 E-value=2.9e-10 Score=102.55 Aligned_cols=128 Identities=15% Similarity=0.075 Sum_probs=93.7
Q ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHH
Q 017535 96 AMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMH 175 (370)
Q Consensus 96 ~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (370)
|.+.+++|.++.+.+++.+...++..++.++.|+++||++||+. +..+..+....... .. .. +. .+.+
T Consensus 30 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~-------~~~~~~~~~~~~~~-~~-~~--~~-~~~l 97 (401)
T PRK11043 30 KAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPV-------LLAGLSLFALGSLG-ML-WV--ES-AAQL 97 (401)
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHH-------HHHHHHHHHHHHHH-HH-Hh--cC-HHHH
Confidence 33448899999999999999999999999999999999999975 33332222211111 11 11 22 3345
Q ss_pred HHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 176 GLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 176 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
.+..++.|++.+...+ ...+++.+.+|+++++...+..+....++..++|.+.+++.+..
T Consensus 98 ~~~~~l~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~ 157 (401)
T PRK11043 98 LVLRFVQAVGVCSAAV-IWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHF 157 (401)
T ss_pred HHHHHHHHhhhHHHHH-HHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 5556666766555444 45677888899888889999988888999999999999998875
No 146
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.30 E-value=7.9e-12 Score=111.63 Aligned_cols=130 Identities=15% Similarity=0.177 Sum_probs=98.4
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCChh
Q 017535 93 SFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTP 172 (370)
Q Consensus 93 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (370)
...|.+.+++|++..+.+++.+...++..++.++.|+++||+|||+. ..++..+......+... . . ..
T Consensus 16 ~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~-------~~~~~~~~~~~~~~~~~--~--~-~~ 83 (379)
T TIGR00881 16 LAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVF-------LPIGLILCAIVNLFFGF--S--T-SL 83 (379)
T ss_pred hhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeeh-------hHHHHHHHHHHHHHHHH--h--h-hH
Confidence 34565558899999999999999999999999999999999999976 33333332222222211 1 1 24
Q ss_pred HHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhH-HHHHHHHh
Q 017535 173 VMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPP-VVGILAQH 235 (370)
Q Consensus 173 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~g~l~~~ 235 (370)
+.+.+..++.|++.+...+ ...+++.+.+|+++|+.+.++.+....+|..++|. +.+.+.+.
T Consensus 84 ~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 146 (379)
T TIGR00881 84 WVMAALWALNGIFQGMGWP-PCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAEL 146 (379)
T ss_pred HHHHHHHHHHHhhccccCC-chHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhc
Confidence 4566677788888887777 78889999999999999999999999999999995 55544443
No 147
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.30 E-value=5.7e-11 Score=107.78 Aligned_cols=159 Identities=18% Similarity=0.206 Sum_probs=94.4
Q ss_pred hhccchHHHHHHHHHhhhhhhHH-HHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHH
Q 017535 68 SVIKIPSFQIIVAQGVTGSFPWS-ALSFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRII 145 (370)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~ 145 (370)
..+++|.++.+....++....++ ...++|.|+ +++|+++.+.|++.+...++..++.++.|+++||+|+|+.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~------ 78 (420)
T PRK09528 5 YYLKNPNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKH------ 78 (420)
T ss_pred hhhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHH------
Confidence 35667777776666655555544 457899999 6699999999999999999999999999999999999876
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccC--CCchhHHHHHHHHHHHHhhc
Q 017535 146 LAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVP--EKSRTSVYAMDRSFESILSS 223 (370)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~g~~~~~~~~~~~~~~~ 223 (370)
..++..+........+.... ............+..++..+.... .......+..+ .+.++..+|......++|..
T Consensus 79 -~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ 155 (420)
T PRK09528 79 -LLWIISGLLVLFGPFFIYVF-APLLQYNILLGAIVGGIYLGFGFL-AGAGAIEAYIERVSRRSGFEYGRARMWGSLGWA 155 (420)
T ss_pred -HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhhhhc-cchhhhhhHHHHHHhhccccchhhHHhhhHHHH
Confidence 22221111111110110000 000000011111111222221111 11112222211 23467788888899999999
Q ss_pred hhhHHHHHHHHh
Q 017535 224 FAPPVVGILAQH 235 (370)
Q Consensus 224 ~~~~~~g~l~~~ 235 (370)
++|.+.|.+.+.
T Consensus 156 i~~~~~g~l~~~ 167 (420)
T PRK09528 156 LCAFIAGILFNI 167 (420)
T ss_pred HHHHHHHHHHhc
Confidence 999999998764
No 148
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.30 E-value=1.3e-10 Score=104.07 Aligned_cols=149 Identities=11% Similarity=0.031 Sum_probs=107.6
Q ss_pred HHHHHHHHHhhhhhhHHHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHH
Q 017535 74 SFQIIVAQGVTGSFPWSAL-SFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSL 152 (370)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~ 152 (370)
.++.++...+......+.. .++|.+.+++|.|..++|++.+...++..++.++.|+++||+|+|+. ..++..
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~-------~~~~~~ 79 (381)
T PRK03633 7 PVLLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRS-------YYLASL 79 (381)
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH-------HHHHHH
Confidence 3444444444444444444 78899998899999999999999999999999999999999999976 333333
Q ss_pred HHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHH
Q 017535 153 SAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGIL 232 (370)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l 232 (370)
+....... .. .. + +.+.+.+..++.|++.+...+ ...+.+.+..++++|+++.+..+...++|..+||.+.+.+
T Consensus 80 ~~~~~~~~-~~-~~--~-~~~~l~~~~~l~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l 153 (381)
T PRK03633 80 IFAAGCAG-LG-LM--V-GFWSWLAWRFVAGIGCAMIWV-VVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKV 153 (381)
T ss_pred HHHHHHHH-HH-Hh--c-cHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 32222111 11 11 2 244556667788887776655 4455666778888899999999999999999999999887
Q ss_pred HHh
Q 017535 233 AQH 235 (370)
Q Consensus 233 ~~~ 235 (370)
.+.
T Consensus 154 ~~~ 156 (381)
T PRK03633 154 STE 156 (381)
T ss_pred ccc
Confidence 664
No 149
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.29 E-value=2.1e-10 Score=98.62 Aligned_cols=152 Identities=17% Similarity=0.142 Sum_probs=111.7
Q ss_pred chHHHHHHHHHhhhhhhHHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHH
Q 017535 72 IPSFQIIVAQGVTGSFPWSALSFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQIS 150 (370)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~ 150 (370)
.|+++.....+..++..+....-+...+ +++|+|+.|.+++.++..+.+.+.+++.|++.||+|.|+. ..++
T Consensus 13 ~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~-------~~~s 85 (417)
T COG2223 13 RRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKW-------TILS 85 (417)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHH-------HHHH
Confidence 3446666666666666666665555555 8999999999999999999999999999999999999976 3333
Q ss_pred HHH-HHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHH
Q 017535 151 SLS-AIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVV 229 (370)
Q Consensus 151 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 229 (370)
.++ .+++....+. ...+. .+.++++-++.|++.+. .. ...++++..+|++++|.+.|++. .+|+|..+...+.
T Consensus 86 ~~l~~IP~~~~~~a--~~~~~-~~~ll~~gll~G~~Gas-Fa-v~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~ 159 (417)
T COG2223 86 MLLLLIPCLGLAFA--VTYPS-TWQLLVIGLLLGLAGAS-FA-VGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVA 159 (417)
T ss_pred HHHHHHHHHHHHHH--ccCCc-hHHHHHHHHHHhcccce-eh-cccccccccCChhhhhHHHHHhc-cccccHHHHHHHH
Confidence 333 3333333322 22222 24566666667775443 33 55788899999999999999999 9999999988888
Q ss_pred HHHHHhh
Q 017535 230 GILAQHV 236 (370)
Q Consensus 230 g~l~~~~ 236 (370)
.++....
T Consensus 160 P~v~~~~ 166 (417)
T COG2223 160 PLVAVAF 166 (417)
T ss_pred HHHHHHH
Confidence 8888776
No 150
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.29 E-value=4.6e-10 Score=100.86 Aligned_cols=130 Identities=18% Similarity=0.096 Sum_probs=100.5
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCChh
Q 017535 93 SFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTP 172 (370)
Q Consensus 93 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (370)
..+|.+.+++|+|..+.+++.+.+.++..++.++.|+++||+|+|+. ...+..+......... +. +. .
T Consensus 30 ~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~-------l~~~~~l~~~~~~~~~--~a--~~-~ 97 (393)
T PRK09705 30 PLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRS-------VAISLLLIAVGALMRE--LY--PQ-S 97 (393)
T ss_pred hhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHH-------HHHHHHHHHHHHHHHH--HC--cc-h
Confidence 56677778999999999999999999999999999999999999986 3444333332222221 22 22 3
Q ss_pred HHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 173 VMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 173 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
+.+.+..++.|++.+...+ ...+.+.+.+| ++|+.+.++......+|..+++.+.+++.++.
T Consensus 98 ~~ll~~r~l~Gig~~~~~~-~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~ 159 (393)
T PRK09705 98 ALLLSSALLGGVGIGIIQA-VMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHS 159 (393)
T ss_pred HHHHHHHHHHHhHHHHHhh-hhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3456677888888887776 66778888776 67999999999999999999999999888764
No 151
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.28 E-value=1.5e-10 Score=107.55 Aligned_cols=146 Identities=17% Similarity=0.070 Sum_probs=106.1
Q ss_pred HHHHHhhhhhhHHHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHH
Q 017535 78 IVAQGVTGSFPWSAL-SFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIP 156 (370)
Q Consensus 78 ~~~~~~~~~~~~~~~-~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~ 156 (370)
+.+..+.....+... ...|.+.+++|.+..+.+++.+...++.+++.++.|+++||+|||+. ..++.++...
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~-------~~~~~~~~~~ 97 (496)
T PRK03893 25 AWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLA-------MVISIVLFSV 97 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHH-------HHHHHHHHHH
Confidence 333333333343344 34566668899999999999999999999999999999999999875 3333322222
Q ss_pred HHHHHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 157 LAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
....... . .+.+.+.+..++.|++.+...+ ...+++.+.+|+++|+.+.++.+....+|..++|.+.+.+.+..
T Consensus 98 ~~~~~~~--~---~~~~~l~~~~~l~G~~~~~~~~-~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 171 (496)
T PRK03893 98 GTLACGF--A---PGYWTLFIARLVIGMGMAGEYG-SSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVW 171 (496)
T ss_pred HHHHHHH--H---hHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 2211111 1 1244566677788887776666 66788899999999999999999999999999999999888754
No 152
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.28 E-value=4.7e-10 Score=101.07 Aligned_cols=148 Identities=13% Similarity=0.041 Sum_probs=107.7
Q ss_pred HHHHHhhhhhhHHHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHH
Q 017535 78 IVAQGVTGSFPWSAL-SFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIP 156 (370)
Q Consensus 78 ~~~~~~~~~~~~~~~-~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~ 156 (370)
+...++.....+... ...|.+.+++|++..+.+++.+...++..+++++.|++.||+|+|+. ..++..+...
T Consensus 8 ~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~-------~~~g~~l~~~ 80 (410)
T TIGR00885 8 ITSLFALWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAG-------ILLGLFLYAL 80 (410)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHH-------HHHHHHHHHH
Confidence 333333333334444 56677778999999999999999999999999999999999999976 3433333322
Q ss_pred HHHHHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHh
Q 017535 157 LAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQH 235 (370)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~ 235 (370)
.. ..+..... ...++.+.+..++.|++.+...+ ..++++.+..|++++++..++.+.+.++|..++|.+.+.+...
T Consensus 81 g~-~l~~~~~~-~~~~~~~l~~~~l~G~g~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~ 156 (410)
T TIGR00885 81 GA-FLFWPAAE-IMNYTLFLVGLFILTAGLGFLET-AANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILS 156 (410)
T ss_pred HH-HHHHHHHh-hccHHHHHHHHHHHHhhHHHHHh-hhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 22 22211111 12245566677788888887777 6778888888989999999999999999999999999988754
No 153
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.28 E-value=1.1e-10 Score=100.94 Aligned_cols=212 Identities=19% Similarity=0.132 Sum_probs=137.2
Q ss_pred ccCchh--HHHHHHHHHHHHHHHHHHhcCC-CCCCCCCCCCCccccCcccchhhhhhHHHHhhhccchHHHHHHHHHhhh
Q 017535 9 IPGWRI--SFHIVGLISVVVGTLVRLFAND-PHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGVTG 85 (370)
Q Consensus 9 ~~gWr~--~f~i~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (370)
...|-. .|+..+.++.+..++..+..++ |+.++...+...+ + .+..+.+++.++|++|.+.......+
T Consensus 208 ~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s~~~~~--~-------~~f~~si~~~~~n~~F~il~~~ygi~ 278 (480)
T KOG2563|consen 208 DNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPSASQAALQ--D-------ASFPKSIKSCFKNRQFIILAICYGIG 278 (480)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHhhhh--c-------CcHHHHHHHHHcCccHHHHHHHHhhh
Confidence 345655 3555555554444444444444 4433332221111 1 34677888999999977765555444
Q ss_pred hhh-HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHh
Q 017535 86 SFP-WSALSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLV 164 (370)
Q Consensus 86 ~~~-~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (370)
... ++..+.+..-+...|++...+|.+.....++++++++++|.+.||.++-+. .+ .+.....+.. .+.+..
T Consensus 279 ~g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~---~~---~v~~~~~~v~-~~~l~~ 351 (480)
T KOG2563|consen 279 LGLFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKL---TT---LVLYLFALVG-TLMLLT 351 (480)
T ss_pred HHHHHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHH---HH---HHHHHHHHHH-HHHHHH
Confidence 443 444444444455567777889999999999999999999999999766554 11 1111111111 122222
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhhc
Q 017535 165 LPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVY 237 (370)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~~ 237 (370)
........+++......+|++.....| +...+..|..-|...++..|+.+..+++.+.+-..+.+...+..+
T Consensus 352 ~t~~~~~~viv~~t~~~~g~~~~~~~P-ig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~ 423 (480)
T KOG2563|consen 352 CTLFLGDSVIVFTTCGLLGFFGTGYLP-IGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLG 423 (480)
T ss_pred hhccCCceEehhhhHHHHHHhhcCCCC-cceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccC
Confidence 222333334566667778888877788 889999999888889999999999999999998888888888764
No 154
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.27 E-value=3.1e-10 Score=102.50 Aligned_cols=130 Identities=13% Similarity=0.060 Sum_probs=96.1
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCChhH
Q 017535 94 FAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPV 173 (370)
Q Consensus 94 ~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (370)
.+|.+.+++|.++.+.++..+...++..++.++.|+++||+|||+. ..++..+.......... . + ..+
T Consensus 35 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~-------l~~~~~~~~~~~~~~~~--~--~-~~~ 102 (406)
T PRK15402 35 GMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPV-------MLAGVAFFILTCLAILL--A--Q-SIE 102 (406)
T ss_pred chHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHH-------HHHHHHHHHHHHHHHHH--H--c-cHH
Confidence 4555668899999999999999999999999999999999999975 33333222222222111 1 1 233
Q ss_pred HHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 174 MHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 174 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
.+.+..++.|++.+...+ ...+.+.+.+|++.++.+.++......++..++|.+.+.+.+..
T Consensus 103 ~l~~~~~l~G~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~ 164 (406)
T PRK15402 103 QFTLLRFLQGIGLCFIGA-VGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVL 164 (406)
T ss_pred HHHHHHHHHHhHhhhHHH-HHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 455566777776665555 56778888899998999999988888888999999999888765
No 155
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.27 E-value=1.7e-10 Score=102.96 Aligned_cols=133 Identities=11% Similarity=0.029 Sum_probs=92.8
Q ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCC
Q 017535 89 WSALSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDD 168 (370)
Q Consensus 89 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (370)
+....+.|.+.+++|++..+.+++.+...++..++.++.|+++||+|||+. ..++..+..........
T Consensus 20 ~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~-------~~~~~~~~~~~~~~~~~----- 87 (377)
T TIGR00890 20 YTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAV-------AMLGGILYGLGFTFYAI----- 87 (377)
T ss_pred hhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccch-------hHHhHHHHHHHHHHHHH-----
Confidence 333345666668999999999999999999999999999999999999987 33333332222211111
Q ss_pred CChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHh
Q 017535 169 PSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQH 235 (370)
Q Consensus 169 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~ 235 (370)
..+.+.+.+..++.|++.+...+ .....+.+..| ++|+.+.++......+|..+++++.+.+.+.
T Consensus 88 ~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 152 (377)
T TIGR00890 88 ADSLAALYLTYGLASAGVGIAYG-IALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINL 152 (377)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHH-hHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhc
Confidence 11234455566677777766555 44556666666 5699999999998888887777676666554
No 156
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.27 E-value=2.8e-10 Score=95.80 Aligned_cols=101 Identities=19% Similarity=0.132 Sum_probs=71.6
Q ss_pred HHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCcc
Q 017535 116 FVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNN 195 (370)
Q Consensus 116 ~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 195 (370)
..+....|.++.+++.||+|||+. +....++..++.+..+.. .... ...+.++..-++....+. +.+
T Consensus 390 tslaefPGlLIt~~iverlGRKkT-------Mal~l~~f~iflfll~~c--~~rn---~~tvllf~arafisg~fq-vaY 456 (528)
T KOG0253|consen 390 TSLAEFPGLLITGVIVERLGRKKT-------MALSLILFGIFLFLLTTC--KTRN---AYTVLLFTARAFISGAFQ-VAY 456 (528)
T ss_pred HHHhhCCchhHHHHHHHHhcchhH-------HHHHHHHHHHHHHHHHHh--cCcc---hhHHHHHHHHHHHhchhe-EEE
Confidence 367788899999999999999987 344433333333332222 2221 133334444444444555 779
Q ss_pred chhccccCCCchhHHHHHHHHHHHHhhchhhHHH
Q 017535 196 PIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVV 229 (370)
Q Consensus 196 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 229 (370)
.+..|++|...|+++.|..+.+..+|+.+.|.+.
T Consensus 457 vYtPEVyPTavRatgvGtcSsmaRIggI~~p~iA 490 (528)
T KOG0253|consen 457 VYTPEVYPTAVRATGVGTCSSMARIGGIFSPVIA 490 (528)
T ss_pred EecCcccchhhhhcchhhhhhHHhhhhhhhhHHH
Confidence 9999999999999999999999999999999887
No 157
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.26 E-value=5.1e-10 Score=101.14 Aligned_cols=129 Identities=12% Similarity=0.028 Sum_probs=96.3
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCChhHH
Q 017535 95 AAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVM 174 (370)
Q Consensus 95 ~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (370)
+|.+.+++|.+..+.++..+.+.++..++.++.|+++||+|||+. +..+..+..... +... .. + +.+.
T Consensus 39 l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~-------l~~~~~~~~~~~-~~~~-~a--~-~~~~ 106 (413)
T PRK15403 39 IINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPV-------LITGALIFTLAC-AATL-FT--T-SMTQ 106 (413)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHH-------HHHHHHHHHHHH-HHHH-Hc--C-CHHH
Confidence 445457899999999999999999999999999999999999976 333322222221 1111 11 2 2444
Q ss_pred HHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 175 HGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 175 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
+.+..++.|++.+...+ ...+++.+.+|+++++++.++.+....++..++|.+++.+.+..
T Consensus 107 l~~~r~l~Gi~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~ 167 (413)
T PRK15403 107 FLIARFIQGTSICFIAT-VGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFV 167 (413)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 66677777877665444 45677788889988999999999999999999999999888764
No 158
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.25 E-value=9e-10 Score=99.34 Aligned_cols=140 Identities=10% Similarity=0.063 Sum_probs=96.3
Q ss_pred hhhHHHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHH-----hhhCCCchhHHHHHHHHHHHHHHHH
Q 017535 86 SFPWSAL-SFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFL-----SARFPNSGRIILAQISSLSAIPLAA 159 (370)
Q Consensus 86 ~~~~~~~-~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (370)
...+++. .-+|.|+++.|++..+.|++...... .+..++.|+++||+ |||+. .+.++.........
T Consensus 12 ~~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~------~l~~~~~~~~l~~~ 83 (402)
T PRK11902 12 GLPLALTSGTLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRG------WLLLTQVGLAASIA 83 (402)
T ss_pred hhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchh------HHHHHHHHHHHHHH
Confidence 3344444 57899998899999999998666554 57889999999999 66654 12222222221222
Q ss_pred HHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 160 LLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
.+.. .+. ....+.+.+..++.++......+ ...+++.+..|+++|+.+.++......+|..+++.+.+.+.+..
T Consensus 84 ~l~~-~~~-~~~~~~l~~~~~~~~~~~~~~~~-~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~ 157 (402)
T PRK11902 84 AMAF-CPP-HAALWPLAGLAVLVAFLSASQDI-VFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRV 157 (402)
T ss_pred HHHh-cCc-cchHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcc
Confidence 2121 222 22244445454555666666666 77899999999999999999999988999999999888887753
No 159
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.24 E-value=3.4e-10 Score=101.12 Aligned_cols=133 Identities=17% Similarity=0.089 Sum_probs=90.0
Q ss_pred HHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCC
Q 017535 92 LSFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPS 170 (370)
Q Consensus 92 ~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (370)
...+|.|+ +++|.+..+.+++.+...+...+..++.|+++||+|||+. ..+.......+...... .. +.
T Consensus 17 ~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~-------~~~~~~~~~~~~~~~~~-~~--~~ 86 (375)
T TIGR00899 17 FPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKG-------LILFCCLLAALACLLFA-WN--RN 86 (375)
T ss_pred hhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchH-------HHHHHHHHHHHHHHHHH-hc--ch
Confidence 35678888 7899999999999999999999999999999999998875 22222221111111111 11 22
Q ss_pred hhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHH--HHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 171 TPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSV--YAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 171 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
.+.+.+..++.+...+...| ...++..+..|++.|+.+ .+......++|..++|.+.+.+.+..
T Consensus 87 -~~~l~~~~~~~g~~~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~ 152 (375)
T TIGR00899 87 -YFLLLVLGVLLSSFASTANP-QLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGF 152 (375)
T ss_pred -HHHHHHHHHHHHhhhhhhHH-HHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhc
Confidence 33334444555555444555 556666776776666544 57777888899999999999988765
No 160
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.24 E-value=1.3e-09 Score=100.20 Aligned_cols=163 Identities=9% Similarity=-0.033 Sum_probs=95.3
Q ss_pred hccchHHHHHHH--HHhhhhhhHHHH-HHHHHHHH-HhCCCH----HHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCC
Q 017535 69 VIKIPSFQIIVA--QGVTGSFPWSAL-SFAAMWLE-LTGFSH----EKTAFLMALFVIASSLGGLFGGRMGDFLSARFPN 140 (370)
Q Consensus 69 ~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~-~~g~s~----~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~ 140 (370)
.+|+|.+....+ .....+..+... +.++.+.+ ..+.+. ...+.+.+...+..++..++.+++.||+++|+..
T Consensus 263 ~~r~r~~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~ 342 (489)
T PRK10207 263 TGRNKMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHLGSKGKD 342 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCC
Confidence 455665443322 233333333333 45666663 232211 0123333444456667788889999999988642
Q ss_pred chhHHHHHHHHHHHHHHHHHH----HHhC-CCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHH
Q 017535 141 SGRIILAQISSLSAIPLAALL----LLVL-PDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDR 215 (370)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 215 (370)
........++.++........ .... .+.....+.+....++.|++.+...| +..+++.+..|++.+|.++|+.+
T Consensus 343 ~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~-~g~~~~~~~aP~~~~g~~~g~~~ 421 (489)
T PRK10207 343 LSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISA-LGLAMIAALVPQHLMGFILGMWF 421 (489)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhH-HHHHHHHHhChHHHHHHHHHHHH
Confidence 222222333333322111111 1111 11122344455677788888888888 78888999999999999999999
Q ss_pred HHHHHhhchhhHHHHHH
Q 017535 216 SFESILSSFAPPVVGIL 232 (370)
Q Consensus 216 ~~~~~~~~~~~~~~g~l 232 (370)
....+|+.++..+....
T Consensus 422 l~~~ig~~lg~~l~~~~ 438 (489)
T PRK10207 422 LTQAAAFLLGGYVATFT 438 (489)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999998887776644
No 161
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.21 E-value=1.4e-10 Score=106.65 Aligned_cols=131 Identities=14% Similarity=0.138 Sum_probs=100.0
Q ss_pred HhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHH
Q 017535 101 LTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLV 180 (370)
Q Consensus 101 ~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (370)
+++++..+.|++.+.+.++.+++.+++|+++||+|+|+. +.++.++..+...+...... . ..+.+.+..+
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~-------l~~~~~~~~~~~~~~~~~~~--~-~~~~l~~~r~ 139 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWS-------IGIGMFLSSVISIVIPWAAG--G-GIALVVFCRV 139 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchh-------hHHHHHHHHHHHHHHHHHHH--c-CchHHHHHHH
Confidence 678999999999999999999999999999999999986 33333322222211111111 1 1334666778
Q ss_pred HHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhhcCCCCC
Q 017535 181 VTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYGFKPI 242 (370)
Q Consensus 181 ~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~~g~~~~ 242 (370)
+.|++.+...| ....++.+.+|+++|+++.|+.+....+|..+++.+.+.+.+...||...
T Consensus 140 ~~G~~~~~~~~-~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~ 200 (465)
T TIGR00894 140 IQGLAQGSVSP-ATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMI 200 (465)
T ss_pred HHHHhcccchh-hHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCee
Confidence 88888888888 78889999999999999999999999999999999999988763255443
No 162
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.20 E-value=4e-10 Score=101.46 Aligned_cols=154 Identities=18% Similarity=0.158 Sum_probs=95.9
Q ss_pred chHHHHHHHHHhhhhhhHHH-HHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHH
Q 017535 72 IPSFQIIVAQGVTGSFPWSA-LSFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQI 149 (370)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~ 149 (370)
||.++.+....++.+..++. ..++|.|+ +++|+++.+.+++.+...++..++.++.|+++||+|||+. ...
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~-------~~~ 73 (396)
T TIGR00882 1 NTNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKH-------LLW 73 (396)
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHH-------HHH
Confidence 46666666555555555444 47889999 6799999999999999999999999999999999999976 222
Q ss_pred HHHHHHHHHH-HHHHhCCCC-C-ChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhh
Q 017535 150 SSLSAIPLAA-LLLLVLPDD-P-STPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAP 226 (370)
Q Consensus 150 ~~~~~~~~~~-~~~~~~~~~-~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 226 (370)
+......... ......... . ..+....+..+..|++.+...+ ....+..+..+ .++...|......++|.+++|
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~g~ 150 (396)
T TIGR00882 74 IISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAG-AIEAYIEKVSR--NSNFEYGKARMFGCVGWALCA 150 (396)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchh-hHHHHHHHhhh--hcccccchhhhhcccHHHHHH
Confidence 2111111111 111111110 0 0111223333445555555455 44444444322 244566778888899999999
Q ss_pred HHHHHHHHh
Q 017535 227 PVVGILAQH 235 (370)
Q Consensus 227 ~~~g~l~~~ 235 (370)
.++|.+.+.
T Consensus 151 ~~~g~l~~~ 159 (396)
T TIGR00882 151 SIAGILFSI 159 (396)
T ss_pred HHHhhhhcc
Confidence 998877653
No 163
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.19 E-value=3.6e-09 Score=98.24 Aligned_cols=124 Identities=17% Similarity=0.064 Sum_probs=92.6
Q ss_pred CCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCC--hhHHHHHHHH
Q 017535 103 GFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPS--TPVMHGLVLV 180 (370)
Q Consensus 103 g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 180 (370)
..+..+.+++.+...++.+++.++.|+++||+|||+. ..++.++..+...+... .+.... ....+.+..+
T Consensus 52 ~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~-------~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~r~ 123 (502)
T TIGR00887 52 PLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRV-------YGMELIIMIIATVASGL-SPGSSPKSVMATLCFWRF 123 (502)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHH-------HHHHHHHHHHHHHHHHH-ccCcccchHHHHHHHHHH
Confidence 3456677888999999999999999999999999976 23332222222222111 121111 1345777888
Q ss_pred HHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHh
Q 017535 181 VTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQH 235 (370)
Q Consensus 181 ~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~ 235 (370)
+.|++.+...+ ...+++.|.+|++.||++.++.+....+|..+++.+...+...
T Consensus 124 l~G~~~g~~~~-~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~ 177 (502)
T TIGR00887 124 WLGVGIGGDYP-LSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAG 177 (502)
T ss_pred HHHHHHhhhhH-HHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88998888887 7899999999999999999999999999999999888776653
No 164
>PTZ00207 hypothetical protein; Provisional
Probab=99.19 E-value=1.7e-09 Score=99.87 Aligned_cols=137 Identities=12% Similarity=0.009 Sum_probs=89.1
Q ss_pred hhHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCC
Q 017535 87 FPWSALSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLP 166 (370)
Q Consensus 87 ~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (370)
..|.+..+.|.+.+++|++..+.+.+.+... ...++.++.|++.||+|+|+. ..++.++......+..+...
T Consensus 42 ~~y~fsv~s~~L~~~lgls~~~l~~i~svg~-~~g~~~lp~G~L~Dr~G~R~v-------llig~ll~~iG~ll~ala~~ 113 (591)
T PTZ00207 42 FMYAFNLISGAMQARYNLTQRDLSTITTVGI-AVGYFLLPYSFIYDYLGPRPI-------FVLSMTVFCLGTLLFALTFQ 113 (591)
T ss_pred HHHHHHHHHHHHHHHhCcCHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCcHHH-------HHHHHHHHHHHHHHHHHHhc
Confidence 3345555666666899999999998887643 334566788999999999976 34443333322222222111
Q ss_pred C-CCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHH
Q 017535 167 D-DPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILA 233 (370)
Q Consensus 167 ~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~ 233 (370)
. .....+.+.+..++.|++.++..+ .....+.+.+| ++||.+.|+......+|+++.+.+...+.
T Consensus 114 ~~i~~s~~~l~l~r~l~G~G~~~~~~-~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~ 179 (591)
T PTZ00207 114 EVIEGSVVRLSVYNGLMTLGCMLFDL-GAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFF 179 (591)
T ss_pred ccccCcHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 112355566677777887776655 45666677776 66999999999999999976544444333
No 165
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.18 E-value=1.2e-09 Score=100.90 Aligned_cols=124 Identities=16% Similarity=0.131 Sum_probs=91.4
Q ss_pred hCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHH----hC---CCCCChhHH
Q 017535 102 TGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLL----VL---PDDPSTPVM 174 (370)
Q Consensus 102 ~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~---~~~~~~~~~ 174 (370)
++.+..+.+++.+...++.+++.++.|+++||+|||+. ..++..+.......... .. ......+..
T Consensus 50 ~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~-------~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (479)
T PRK10077 50 ESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDS-------LKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPE 122 (479)
T ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH-------HHHHHHHHHHHHHHHHhhccccccccccchhHHHH
Confidence 38899999999999999999999999999999999986 23332222211111110 00 011122344
Q ss_pred HHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHH
Q 017535 175 HGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILA 233 (370)
Q Consensus 175 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~ 233 (370)
+.+..++.|++.+...+ ...+++.|.+|+++||.+.++.+....+|..+++.+.+.+.
T Consensus 123 l~~~R~l~G~~~g~~~~-~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~ 180 (479)
T PRK10077 123 FVIYRIIGGIGVGLASM-LSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIA 180 (479)
T ss_pred HHHHHHHHhhhHhHHhh-HHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 56777888999888888 88999999999999999999999988888888876665544
No 166
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.17 E-value=7.4e-10 Score=113.27 Aligned_cols=158 Identities=18% Similarity=0.127 Sum_probs=107.7
Q ss_pred hhccchHHHHHHHHHhhhhhhH-HHHHHHHHHH-HHhCCCH--HHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchh
Q 017535 68 SVIKIPSFQIIVAQGVTGSFPW-SALSFAAMWL-ELTGFSH--EKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGR 143 (370)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~g~s~--~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~ 143 (370)
.+++++.+..++...++..... .....+..++ ..++.+. ...+++.+++.++.+++.+++|+++||+|||+.
T Consensus 4 ~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~---- 79 (1146)
T PRK08633 4 NLLKIIGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRV---- 79 (1146)
T ss_pred chhhhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHH----
Confidence 3566677665555444443332 2222333333 5555543 446778888899999999999999999999975
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhc
Q 017535 144 IILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSS 223 (370)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 223 (370)
+.++.++.++...+..+... ....+.+++..++.|++.+...+ ...+++.+.+|+++|+.++|+......+|.+
T Consensus 80 ---l~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~r~l~G~~~~~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~ 153 (1146)
T PRK08633 80 ---IRIVKLFEVGLTLLIVLAYY--LGWFWLAFAVTFLLGAQSAIYSP-AKYGIIPELVGKENLSRANGLLEAFTIVAIL 153 (1146)
T ss_pred ---HHHHHHHHHHHHHHHHHHHH--HccHHHHHHHHHHHHHHHHhhch-HHHhhhHHhcCcccchhhhhHHHHHHHHHHH
Confidence 23222222111111111110 11245567777888888888888 7889999999999999999999999999999
Q ss_pred hhhHHHHHHHHh
Q 017535 224 FAPPVVGILAQH 235 (370)
Q Consensus 224 ~~~~~~g~l~~~ 235 (370)
+|+.+++++.+.
T Consensus 154 lg~~l~~~l~~~ 165 (1146)
T PRK08633 154 AGTALFSFLFES 165 (1146)
T ss_pred HHHHHHHHHHHh
Confidence 999999999876
No 167
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.16 E-value=2.2e-09 Score=95.16 Aligned_cols=132 Identities=16% Similarity=0.128 Sum_probs=100.9
Q ss_pred HHHHHHH-HHhCCCHHH-HHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCC
Q 017535 93 SFAAMWL-ELTGFSHEK-TAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPS 170 (370)
Q Consensus 93 ~~~~~~~-~~~g~s~~~-~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (370)
.+...++ +++|++..+ .|.+...+..+..++.+++|+++||+|.|+. +.++.+...++.++..+ ..
T Consensus 46 s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~v-------L~l~~l~Wsl~t~L~~f-----a~ 113 (511)
T TIGR00806 46 SFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPV-------LVLQALSFVCVWLLLLL-----GT 113 (511)
T ss_pred HHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHH-------HHHHHHHHHHHHHHHHH-----HH
Confidence 3444556 899999999 9999999999999999999999999999975 33333322222222221 11
Q ss_pred hhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhhcCCC
Q 017535 171 TPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYGFK 240 (370)
Q Consensus 171 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~~g~~ 240 (370)
....+.+..++.|++.+... ....++...+|+++|++++|+.+....+|.++++++.++ .... ||.
T Consensus 114 Sl~~L~i~R~llGvaEA~~~--A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~-gWr 179 (511)
T TIGR00806 114 SVWHMQLMEVFYSVTMAARI--AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTL-GWI 179 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHH--HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhc-Cch
Confidence 25567788888999877665 458888899999999999999999999999999999999 4333 443
No 168
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.16 E-value=3e-11 Score=104.76 Aligned_cols=151 Identities=11% Similarity=0.066 Sum_probs=111.2
Q ss_pred HHHHHHhhhhhh-HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHH
Q 017535 77 IIVAQGVTGSFP-WSALSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAI 155 (370)
Q Consensus 77 ~~~~~~~~~~~~-~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~ 155 (370)
.+.+..+++..- |.+-...+-.-+.+|.+....|++.....+..+++++++|+++||++|++. +.++..+-.
T Consensus 37 il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v-------~~vG~~iW~ 109 (493)
T KOG1330|consen 37 ILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRV-------IAVGIFIWT 109 (493)
T ss_pred HHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceE-------EeeHHHHHH
Confidence 334444444443 222233333336789999999999999999999999999999999999986 233322222
Q ss_pred HHHHHHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHh
Q 017535 156 PLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQH 235 (370)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~ 235 (370)
...+. ..+ ....|.+.++..+.|++-+...| +..++++|.+|..+|++++++.++...+|..+|-.+++.+.+.
T Consensus 110 ~Av~~--~~f---s~~Fwq~~l~R~~vGiGeAs~~~-ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~ 183 (493)
T KOG1330|consen 110 LAVFA--SGF---SNHFWQVLLCRGFVGIGEASYSP-IAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASL 183 (493)
T ss_pred HHHHH--HHH---HHHHHHHHHHHHHhccchhhhcc-cchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccC
Confidence 11111 111 13467788889999999998888 9999999999999999999999999999999998888887777
Q ss_pred hcCCC
Q 017535 236 VYGFK 240 (370)
Q Consensus 236 ~~g~~ 240 (370)
.+.|+
T Consensus 184 ~~~Wr 188 (493)
T KOG1330|consen 184 TFWWR 188 (493)
T ss_pred ccceE
Confidence 63333
No 169
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.15 E-value=9.7e-10 Score=112.15 Aligned_cols=120 Identities=12% Similarity=0.107 Sum_probs=90.4
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHH
Q 017535 107 EKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFI 186 (370)
Q Consensus 107 ~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 186 (370)
...++..+.+.+..++..+++|+++||++||+.. .......++......+.+. . ..++.+++..++.|++.
T Consensus 52 ~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~----~~~~~~~~~~~~~~~~~~~-~----~s~~~l~~~~~l~gi~~ 122 (1140)
T PRK06814 52 ALVTLAGAVFILPFFIFSALAGQLADKYDKAKLA----KILKFAEIGIAALAIYGFH-L----NSVPLLFAALFLMGIHS 122 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHH----HHHHHHHHHHHHHHHHHHH-H----hhHHHHHHHHHHHHHHH
Confidence 4567777788899999999999999999999741 0011111111111111111 1 22556778888999998
Q ss_pred HhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 187 SWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
++..| ...+++.+.+|+++++.++|+.++...+|.++||.++|++.+..
T Consensus 123 a~~~p-~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~ 171 (1140)
T PRK06814 123 ALFGP-IKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISG 171 (1140)
T ss_pred Hhhch-HHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 88888 88999999999999999999999999999999999999998865
No 170
>PRK10133 L-fucose transporter; Provisional
Probab=99.15 E-value=4.8e-09 Score=95.43 Aligned_cols=131 Identities=13% Similarity=0.050 Sum_probs=97.5
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCChh
Q 017535 93 SFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTP 172 (370)
Q Consensus 93 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (370)
...|.+-+++|.++.+.++..+.+.++..++.++.|++.||+|+|+. +..+..+......+... ... ..+.
T Consensus 47 ~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~-------l~~g~~~~~~~~~l~~~-~~~-a~~~ 117 (438)
T PRK10133 47 ILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAG-------IITGLFLYALGAALFWP-AAE-IMNY 117 (438)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHH-------HHHHHHHHHHHHHHHHH-HHh-cCCH
Confidence 56777768999999999999999999999999999999999999976 33333333222211110 111 2224
Q ss_pred HHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHH
Q 017535 173 VMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILA 233 (370)
Q Consensus 173 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~ 233 (370)
+.+.+..++.|++.+...+ ..++++.+..|++.++...++.+.+..+|..+++.+++.+.
T Consensus 118 ~~ll~~r~l~G~g~g~~~~-~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~ 177 (438)
T PRK10133 118 TLFLVGLFIIAAGLGCLET-AANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLI 177 (438)
T ss_pred HHHHHHHHHHHHHHHHHHh-hHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5567778888888887777 77788888766666666899999999999999999887765
No 171
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.15 E-value=1.2e-09 Score=100.75 Aligned_cols=116 Identities=17% Similarity=0.153 Sum_probs=87.5
Q ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHH
Q 017535 104 FSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTG 183 (370)
Q Consensus 104 ~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 183 (370)
.+..+.+++.+...++..++.++.|+++||+|||+. ..++.++......+... .. .....+.+.+..++.|
T Consensus 68 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~-------~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~r~l~G 138 (481)
T TIGR00879 68 YSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKS-------LLIIALLFVIGAILMGL-AA-FALSVEMLIVGRVLLG 138 (481)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHH-------HHHHHHHHHHHHHHHHH-hc-cccchHHHHHHHHHHH
Confidence 348999999999999999999999999999999975 33333322222222111 12 2222345666778888
Q ss_pred HHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHH
Q 017535 184 LFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVV 229 (370)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 229 (370)
++.+...+ ...+++.+.+|+++|+.+.++.+....+|..+++.+.
T Consensus 139 ~~~~~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~ 183 (481)
T TIGR00879 139 IGVGIASA-LVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFG 183 (481)
T ss_pred hhhhHHHh-HHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 88877777 7788999999999999999999999999999998887
No 172
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.15 E-value=1.8e-09 Score=98.84 Aligned_cols=130 Identities=13% Similarity=0.101 Sum_probs=91.9
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCChh
Q 017535 93 SFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTP 172 (370)
Q Consensus 93 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (370)
.+.|.+.+++|.+..+.+++.+...+...++.++.|+++||+++|+. ++.+.++....... .. .. +. .
T Consensus 40 ~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~-------l~~~~~~~~~~~~~-~~-~~--~~-~ 107 (455)
T TIGR00892 40 VFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPV-------VIAGGLLASLGMIL-AS-FS--SN-V 107 (455)
T ss_pred hhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHH-------HHhhHHHHHHHHHH-HH-Hh--hh-H
Confidence 46777778999999999999999888889999999999999999975 33332222221111 11 11 11 2
Q ss_pred HHHH-HHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 173 VMHG-LVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 173 ~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
+.+. ...++.|++.+...+ ...+++.+.++ ++|+++.|+.+....++..++|.+.+.+.+..
T Consensus 108 ~~l~~~~~~l~G~~~~~~~~-~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~ 170 (455)
T TIGR00892 108 IELYLTAGFITGLGLAFNFQ-PSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESF 170 (455)
T ss_pred HHHHHHHHHHHHhcchhhhh-HHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHh
Confidence 2222 223455666555444 44566677775 67999999999999999999999999998876
No 173
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.14 E-value=1.7e-09 Score=96.81 Aligned_cols=132 Identities=20% Similarity=0.234 Sum_probs=92.9
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCCh
Q 017535 92 LSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPST 171 (370)
Q Consensus 92 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (370)
..++|.|++++|.|..++|++.+...+...++.++.|.++||++|+... .+...+...+ . ...+... ..+
T Consensus 24 ~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~---~~~~~~~~~~---~-~~~~~~~---~~~ 93 (382)
T PRK11128 24 LPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPA---LRLLALLTLL---F-AVAFWFG---AHS 93 (382)
T ss_pred hhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHH---HHHHHHHHHH---H-HHHHHHh---ccc
Confidence 3678899988999999999999999999999999999999999985321 1111111111 1 1111111 122
Q ss_pred hHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 172 PVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 172 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
.+.+.+..++.|++.+...| ...++..+. .++++.+.+.......+|.++||.++|++.++.
T Consensus 94 ~~~l~i~~~l~g~~~~~~~~-~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~ 155 (382)
T PRK11128 94 FWLLFVAIGLFNLFFSPLVP-LTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWF 155 (382)
T ss_pred HHHHHHHHHHHHHHHccccc-HHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHc
Confidence 44455566667777666666 555565554 344788888888899999999999999999987
No 174
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.14 E-value=4.3e-09 Score=94.65 Aligned_cols=155 Identities=16% Similarity=0.092 Sum_probs=89.6
Q ss_pred hccchHHHHHHHHHhhhhhhHHHHHHHHHHH-HHhCCCHHHHHHHHHHHHH-HHHHhHHHHHHHHHHHhhhCCCchhHHH
Q 017535 69 VIKIPSFQIIVAQGVTGSFPWSALSFAAMWL-ELTGFSHEKTAFLMALFVI-ASSLGGLFGGRMGDFLSARFPNSGRIIL 146 (370)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~-~~~ig~~~~g~l~dr~~~~~~~~~~~~~ 146 (370)
.++.|....++..++...........+|.|+ +++|.++.+.|++.+...+ +..++.+++++ .||+|+|+.
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~------- 83 (393)
T PRK15011 12 SFDLTSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKS------- 83 (393)
T ss_pred hccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhH-------
Confidence 4445555444444444443344446788888 8899999999998776644 55566666666 999999875
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCch--hHHHHHHHHHHHHhhch
Q 017535 147 AQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSR--TSVYAMDRSFESILSSF 224 (370)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~ 224 (370)
.++...+...+....+ ... .. .+.+.+...+.+...+...| ...++..+..+++.| +...++.+....+|..+
T Consensus 84 ~~~~~~~~~~~~~~~~-~~~--~~-~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~ 158 (393)
T PRK15011 84 LIVFCCLLGVLACTLF-AWN--RN-YFVLLFVGVFLSSFGSTANP-QMFALAREHADKTGREAVMFSSFLRAQVSLAWVI 158 (393)
T ss_pred HHHHHHHHHHHHHHHH-HHh--hH-HHHHHHHHHHHHHHHHhhHH-HHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHH
Confidence 2222111111111111 111 22 22222222223333333344 445555665555433 34457888888999999
Q ss_pred hhHHHHHHHHhh
Q 017535 225 APPVVGILAQHV 236 (370)
Q Consensus 225 ~~~~~g~l~~~~ 236 (370)
+|.+++.+.+..
T Consensus 159 g~~i~~~l~~~~ 170 (393)
T PRK15011 159 GPPLAYALAMGF 170 (393)
T ss_pred hhHHHHHHHHhc
Confidence 999999998876
No 175
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.14 E-value=8.5e-09 Score=95.21 Aligned_cols=154 Identities=12% Similarity=0.082 Sum_probs=100.1
Q ss_pred cchHHHHHHHHHhhhhhhHHH-HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHH-----hhhCCCchhH
Q 017535 71 KIPSFQIIVAQGVTGSFPWSA-LSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFL-----SARFPNSGRI 144 (370)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-----~~~~~~~~~~ 144 (370)
++|+...++...+........ ...+|.++++.|.+..+.+.+..+ .... ++.++.|.++||+ |||+.
T Consensus 10 ~~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~~~g~~~~~ig~~~~~-~~~~-~~~~l~gpl~Dr~~~~~~Grrr~----- 82 (491)
T PRK11010 10 QQPNSAILLILGFASGLPLALTSGTLQAWMTVENIDLKTIGFFSLV-GQAY-VFKFLWSPLMDRYTPPFLGRRRG----- 82 (491)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHH-HHHH-HHHHHHHHHHHcccccCCCCchH-----
Confidence 444544444333344444333 357889998889999999986332 2222 5789999999999 77764
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhch
Q 017535 145 ILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSF 224 (370)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 224 (370)
.+..+.+............. .....+.+.+..++.+++.+...+ ...++..|.+|+++|+.+.++......+|..+
T Consensus 83 --~ll~~~i~~~~~~~~~a~~~-~~~~l~~l~~~~~l~~~~~a~~~i-~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~ll 158 (491)
T PRK11010 83 --WLLATQLLLLVAIAAMGFLE-PGTQLRWLAALAVVIAFCSASQDI-VFDAWKTDVLPAEERGAGAAISVLGYRLAMLV 158 (491)
T ss_pred --HHHHHHHHHHHHHHHHHHcC-CcchHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcChhhhHHHHHHHHHHHHHHHHH
Confidence 22222222211111111122 122244455556666776666666 67888999999999999999999999999999
Q ss_pred hhHHHHHHHHh
Q 017535 225 APPVVGILAQH 235 (370)
Q Consensus 225 ~~~~~g~l~~~ 235 (370)
++.+.+++.+.
T Consensus 159 g~~l~~~l~~~ 169 (491)
T PRK11010 159 SGGLALWLADR 169 (491)
T ss_pred HHHHHHHHHhc
Confidence 99999888873
No 176
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.14 E-value=2.6e-10 Score=97.04 Aligned_cols=210 Identities=15% Similarity=0.126 Sum_probs=132.4
Q ss_pred CccccccccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccccCcccchhhhhhHHHHhhhccchHHHHHHHH
Q 017535 2 APMTFMGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQ 81 (370)
Q Consensus 2 ~g~~~~~~~gWr~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (370)
.|+.+-+..|.+.+|++++++.++-..+.++.++..+..+... ..-..+++++++|..+.....
T Consensus 215 fGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~~~~----------------~~~~~~~~Ll~dP~I~~~aga 278 (464)
T KOG3764|consen 215 FGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMDPDST----------------EQGTPMWSLLMDPYILLIAGA 278 (464)
T ss_pred cccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccCcccc----------------ccCccHHHHHhCchHhhhhcc
Confidence 5778888999999999999999888877776655422222111 011124578889987766655
Q ss_pred HhhhhhhHHHH-HHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHH
Q 017535 82 GVTGSFPWSAL-SFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAA 159 (370)
Q Consensus 82 ~~~~~~~~~~~-~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (370)
........++. -.++.+. +.+..+.-+.|+.+....+...++..+.|.++||++..+. ++....+.... ..
T Consensus 279 i~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~w------l~~~~gl~~~G-~~ 351 (464)
T KOG3764|consen 279 ITFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRW------LLSLGGLATVG-VS 351 (464)
T ss_pred hhhccchHHHhCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhcCchhH------HHHHHHHHHHH-HH
Confidence 55555554555 4567777 7777555589999999999999999999999999984432 11211111111 11
Q ss_pred HHHHhCCCCCChhHHHHHHHHHHHHHHH----hcCCCCccchhccccCCC---chhHHHHHHHHHHHHhhchhhHHHHHH
Q 017535 160 LLLLVLPDDPSTPVMHGLVLVVTGLFIS----WNAPATNNPIFAEIVPEK---SRTSVYAMDRSFESILSSFAPPVVGIL 232 (370)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~----~~~~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~g~l 232 (370)
... .+.... +..+.+..+..+++.+ ...| +..++.|....+ ..|.++++......++.++||.++|.+
T Consensus 352 ~~~--iP~~~~-~~~L~vp~~~l~~~i~~~dasl~P--~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~i 426 (464)
T KOG3764|consen 352 SGP--IPFATS-IAQLWVPNFGLGFGIGLADASLIP--TLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSL 426 (464)
T ss_pred hch--hHhhhh-HHHHhhhhHHHHHHHHHHHHHHhh--hhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchh
Confidence 111 111111 2223333333333332 2233 244444443333 678999999999999999999999999
Q ss_pred HHhhcCCC
Q 017535 233 AQHVYGFK 240 (370)
Q Consensus 233 ~~~~~g~~ 240 (370)
.+.. ||.
T Consensus 427 v~~i-GF~ 433 (464)
T KOG3764|consen 427 VEAI-GFE 433 (464)
T ss_pred eeeh-hHH
Confidence 9988 643
No 177
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.13 E-value=1.1e-08 Score=94.12 Aligned_cols=142 Identities=10% Similarity=-0.014 Sum_probs=87.7
Q ss_pred HHHHHHH-HHhCCCHH----HHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHH--hC
Q 017535 93 SFAAMWL-ELTGFSHE----KTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLL--VL 165 (370)
Q Consensus 93 ~~~~~~~-~~~g~s~~----~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 165 (370)
+.++.+. +..+.+.. ..+++.++..+..++..++..++..|..+|...........++.++.........+ ..
T Consensus 293 s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~ 372 (475)
T TIGR00924 293 TSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWF 372 (475)
T ss_pred hHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 4456666 43333322 25667777777777777766666666666522111222223333322211111111 11
Q ss_pred CC--CCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHh
Q 017535 166 PD--DPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQH 235 (370)
Q Consensus 166 ~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~ 235 (370)
.. ...+.+.+....++.+++.....| ...+++.+..|++.||+.+|+......+|..+++.+.....+.
T Consensus 373 ~~~~~~~s~~~~i~~~~~~~~ge~~~~p-~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~ 443 (475)
T TIGR00924 373 ADAGGLTSPWFMVLIYLFQTLGELMISP-LGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVP 443 (475)
T ss_pred cCCCCccCHHHHHHHHHHHHHHHHHHhH-HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 11 123455567777888888888888 8899999999999999999999999998888888877765544
No 178
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.13 E-value=3.5e-09 Score=93.94 Aligned_cols=132 Identities=12% Similarity=0.064 Sum_probs=90.1
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHH-----hhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCC
Q 017535 94 FAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFL-----SARFPNSGRIILAQISSLSAIPLAALLLLVLPDD 168 (370)
Q Consensus 94 ~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (370)
.+|.++++.|+|..+.+++... .+...+ .++.|+++||+ |||+. + +..+.++....... +.....
T Consensus 10 ~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~-----~-l~~~~~~~~~~~~~-l~~~~~- 79 (356)
T TIGR00901 10 TLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRS-----W-LVLTQVLLLSLLLI-LSFLVP- 79 (356)
T ss_pred HHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHH-----H-HHHHHHHHHHHHHH-HHcCCc-
Confidence 4577889999999999998654 444444 88999999998 55543 1 12222222111111 111222
Q ss_pred CChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 169 PSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 169 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
....+.+....++.+++.+...+ ...+++.|.+|+++|+.+.++......+|..+++.+.+.+.+..
T Consensus 80 ~~~l~~l~~~~~~~~~~~~~~~~-~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~ 146 (356)
T TIGR00901 80 STDLPLLAGLAFLIAFFSATQDI-ALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPE 146 (356)
T ss_pred chhHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 22234444555555666665556 67888999999999999999999999999999999999888776
No 179
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.11 E-value=9.5e-10 Score=99.35 Aligned_cols=130 Identities=22% Similarity=0.242 Sum_probs=104.3
Q ss_pred HhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHH
Q 017535 101 LTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLV 180 (370)
Q Consensus 101 ~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (370)
.+.+++.+.+++++....+.+++.+.+|++.||+|.|+. ...+.++......+.-+..... .+.+.++.+
T Consensus 67 ~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v-------~~~~~~~sa~~t~l~P~aa~~~---~~~~~~~R~ 136 (466)
T KOG2532|consen 67 EYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRV-------FFISGLISALLTLLTPLAASIG---FYLLLVLRF 136 (466)
T ss_pred eecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHH-------HHHHHHHHHHHHHHHHHHHHhc---chhhHHHHH
Confidence 478899999999999999999999999999999999976 3444333333333222221111 225688899
Q ss_pred HHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhhcCCCC
Q 017535 181 VTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYGFKP 241 (370)
Q Consensus 181 ~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~~g~~~ 241 (370)
+.|++.+...| ....+.....|+++|++..++.....++|..++-++.|.+.+...||..
T Consensus 137 lqGl~~g~~~p-a~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~s 196 (466)
T KOG2532|consen 137 LQGLGQGVLFP-AIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPS 196 (466)
T ss_pred HhHHHHhHHHh-hhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCch
Confidence 99999999999 8999999999999999999999999999999999999999998436443
No 180
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.11 E-value=4.9e-08 Score=84.53 Aligned_cols=166 Identities=16% Similarity=0.122 Sum_probs=117.9
Q ss_pred hhHHHHhhhccchHHHHHHHHHhhhhhhHHHH-HHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHH-Hhhh
Q 017535 61 VLIQEAKSVIKIPSFQIIVAQGVTGSFPWSAL-SFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDF-LSAR 137 (370)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr-~~~~ 137 (370)
.....+++++.+|....++.+.+.....+... ..+-+|- +.+|++..+...+......+..+|..+.|++..| .+++
T Consensus 196 ~f~~a~~~~~~~~~a~~f~~fl~l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~ 275 (403)
T PF03209_consen 196 PFREAWRQVWASPQARRFFVFLFLGTLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKK 275 (403)
T ss_pred cHHHHHHHHHhCCChhHHHHHHHHHHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCch
Confidence 34455667778888666666655566665555 4566777 8899999999999999999999999999988764 3322
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHH
Q 017535 138 FPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSF 217 (370)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 217 (370)
+. ..+++..+......+....... +.+.+-...+++|++.|.... ...+.+.+..++++.|...|.....
T Consensus 276 ~~-------a~~G~~~~~~~f~lii~a~~~~--~~~~~~~~~~l~G~g~G~f~v-gals~mM~lt~~~~aG~~mG~WGaa 345 (403)
T PF03209_consen 276 RT-------AALGCLLGALAFALIILAGPLG--SPWLFRPGVFLLGLGNGLFTV-GALSLMMDLTSAGRAGLFMGAWGAA 345 (403)
T ss_pred HH-------HHHHHHHHHHHHHHHHHHHhcc--cchHHHHHHHHHHHhhhHHHH-HHHHHHHhCCCCcchhHHHHHHHHH
Confidence 22 2333333332222222211211 234566677788888777666 5677778888889999999999999
Q ss_pred HHHhhchhhHHHHHHHHhh
Q 017535 218 ESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 218 ~~~~~~~~~~~~g~l~~~~ 236 (370)
+.++..++..++|.+.|..
T Consensus 346 QA~A~Glg~~~GG~~~D~~ 364 (403)
T PF03209_consen 346 QAIARGLGTFLGGALRDLV 364 (403)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999986
No 181
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.10 E-value=1.2e-11 Score=113.73 Aligned_cols=223 Identities=19% Similarity=0.304 Sum_probs=0.0
Q ss_pred CchhHHHHHHHHHHHHHHHHHHhcCC-CCCCCCC---C--C-CCcc---c---cC---cccchhhhhhHHHHhhhccchH
Q 017535 11 GWRISFHIVGLISVVVGTLVRLFAND-PHFPDGG---T--A-NSDQ---V---SS---KSFRSDVKVLIQEAKSVIKIPS 74 (370)
Q Consensus 11 gWr~~f~i~~~~~~i~~~~~~~~~~~-~~~~~~~---~--~-~~~~---~---~~---~~~~~~~~~~~~~~~~~~~~~~ 74 (370)
.|...|++.+++.++.++..++++|+ |...+.. + + +.++ . .. .......++.++.++++++||.
T Consensus 227 AWWLGfli~g~~~~l~aipl~~FPk~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~ 306 (539)
T PF03137_consen 227 AWWLGFLICGILLFLSAIPLFFFPKKLPGTSERQEEKESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPV 306 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCccCCCcccccchhhhhhcchhhhhhhcccccccccchhhhhhhHHHHHHHHhcChH
Confidence 38888999999999999888888776 4431100 0 0 0000 0 00 0011234667788899999999
Q ss_pred HHHHHHHHhhhhhh-HHHHHHHHHHH-HHhCCCHHHHHHHHHHHHH-HHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHH
Q 017535 75 FQIIVAQGVTGSFP-WSALSFAAMWL-ELTGFSHEKTAFLMALFVI-ASSLGGLFGGRMGDFLSARFPNSGRIILAQISS 151 (370)
Q Consensus 75 ~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~-~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 151 (370)
+....+........ .++.+|+|.|+ .+++.++.+++++.....+ +.++|.+++|++.+|+.-+... ..+..++..
T Consensus 307 f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~--~~~~~~v~~ 384 (539)
T PF03137_consen 307 FMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARG--AAKFCIVVS 384 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHH--HHHHHHHHH
Confidence 87776666555554 56668999999 8899999999999887755 7788999999999998654321 222222222
Q ss_pred HHHHHH-HHHHHHhC----------CC----------------------------------C-CChhHHHHHHHHHHHHH
Q 017535 152 LSAIPL-AALLLLVL----------PD----------------------------------D-PSTPVMHGLVLVVTGLF 185 (370)
Q Consensus 152 ~~~~~~-~~~~~~~~----------~~----------------------------------~-~~~~~~~~~~~~~~g~~ 185 (370)
++.++. ...+++.- +. . ...+..+.+.+++..+.
T Consensus 385 ~v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~ 464 (539)
T PF03137_consen 385 IVSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFF 464 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHH
Confidence 222222 11111110 00 0 00011222222333333
Q ss_pred HHhcCCCCccchhccccCCCchhHHHHHHHHHHHH-hhchhhHHHHHHHHhh
Q 017535 186 ISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESI-LSSFAPPVVGILAQHV 236 (370)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~g~l~~~~ 236 (370)
.+.... +......+.+|+++|+.+.|+..++..+ |...+|++.|.+.|..
T Consensus 465 ~~~~~~-p~~~i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~t 515 (539)
T PF03137_consen 465 TFMSQV-PSTLITLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDST 515 (539)
T ss_dssp ----------------------------------------------------
T ss_pred HHhccc-chheeeeccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhhh
Confidence 333333 4456667889999999999998877665 5588999999999986
No 182
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.10 E-value=6.3e-09 Score=94.77 Aligned_cols=136 Identities=18% Similarity=0.131 Sum_probs=87.7
Q ss_pred HHHHHHHHHHH-HHhC---CCHHHH---HHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHH
Q 017535 89 WSALSFAAMWL-ELTG---FSHEKT---AFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALL 161 (370)
Q Consensus 89 ~~~~~~~~~~~-~~~g---~s~~~~---~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (370)
...+.+...++ ++++ .+..+. +.+++...++..+|.+++|+++||+|||+. +.++..+.......
T Consensus 38 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~-------l~~~~~~~~~~~~~- 109 (432)
T PRK10406 38 FYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKS-------MLISVCMMCFGSLV- 109 (432)
T ss_pred HHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHH-------HHHHHHHHHHHHHH-
Confidence 34444444455 6663 455433 334444566667999999999999999986 33333322222211
Q ss_pred HHhCCCCC----ChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHH
Q 017535 162 LLVLPDDP----STPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILA 233 (370)
Q Consensus 162 ~~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~ 233 (370)
....+... .....+.+..++.|++.+...+ ...+++.|..|+++||...++.......|..+++.+...+.
T Consensus 110 ~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~-~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~ 184 (432)
T PRK10406 110 IACLPGYETIGTWAPALLLLARLFQGLSVGGEYG-TSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQ 184 (432)
T ss_pred HhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHh-hHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11112111 1123466778889998888888 78899999999999999999888777777777776655443
No 183
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.09 E-value=3.1e-09 Score=95.11 Aligned_cols=139 Identities=18% Similarity=0.161 Sum_probs=94.4
Q ss_pred hhHHHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhC
Q 017535 87 FPWSAL-SFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVL 165 (370)
Q Consensus 87 ~~~~~~-~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (370)
..+++. .++|.|++++|++..+.|++.+...+...++.++.|.++||++|+.. ..+...++..+. . ..+...
T Consensus 18 ~~~~~~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~---~~~~~~~~~~l~---~-~~~~~~ 90 (382)
T TIGR00902 18 CAYGIFLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIII---ALRLLALASAIF---A-AAFSAG 90 (382)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHH---HHHHHHHHHHHH---H-HHHHHh
Confidence 333443 67889998899999999999999999999999999999999987532 111111111111 1 111111
Q ss_pred CCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhhcCC
Q 017535 166 PDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYGF 239 (370)
Q Consensus 166 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~~g~ 239 (370)
.+ ..+.+.+..++.+.+.+...| ...++..+ . .++++..+|.......+|..++|.+.|.+.+.. ||
T Consensus 91 --~~-~~~~l~~~~~l~~~~~~~~~p-~~~al~~~-~-~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~-g~ 157 (382)
T TIGR00902 91 --AH-NAWLLFIAIGLFALFFSAGMP-IGDALANT-W-QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMF-DE 157 (382)
T ss_pred --hh-hHHHHHHHHHHHHHHHccchh-HHHHHHHH-H-HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHc-Ch
Confidence 12 234444455556665555556 55555544 2 466899999999999999999999999999987 53
No 184
>TIGR00898 2A0119 cation transport protein.
Probab=99.07 E-value=2.1e-09 Score=100.01 Aligned_cols=126 Identities=17% Similarity=0.146 Sum_probs=94.5
Q ss_pred HHHHHHHhCCC---HHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCCh
Q 017535 95 AAMWLELTGFS---HEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPST 171 (370)
Q Consensus 95 ~~~~~~~~g~s---~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (370)
.|.+.++++++ ..+.++..+...++.+++.++.|+++||+|||+. ..++.++..+...... +. + .
T Consensus 112 ~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~-------~~~~~~~~~i~~~~~~--~~--~-~ 179 (505)
T TIGR00898 112 SSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKV-------LLLSTLVTAVSGVLTA--FS--P-N 179 (505)
T ss_pred cccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHH-------HHHHHHHHHHHHHHHH--Hc--c-c
Confidence 34444778898 8899999999999999999999999999999975 3333333222221111 11 2 2
Q ss_pred hHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHH
Q 017535 172 PVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILA 233 (370)
Q Consensus 172 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~ 233 (370)
.+.+.+..++.|++.+...+ ...+++.|.+|++.|+.+.++......+|..+++.+.+.+.
T Consensus 180 ~~~~~~~r~l~G~~~~~~~~-~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~ 240 (505)
T TIGR00898 180 YTVFLVFRLLVGMGIGGIWV-QAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIP 240 (505)
T ss_pred HHHHHHHHHHHHhhccchHH-HHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 45567777888888887777 78899999999999999999998888888888887765543
No 185
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.06 E-value=8.8e-10 Score=104.23 Aligned_cols=133 Identities=13% Similarity=0.022 Sum_probs=102.5
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCC------
Q 017535 94 FAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPD------ 167 (370)
Q Consensus 94 ~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 167 (370)
.++.+-++++++..+.|++.+.+.++..++.++.+++.||.+||+.. .++.++..+..++.. .++
T Consensus 55 ~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i-------~~g~ll~~lg~ll~a--lphf~~~~y 125 (633)
T TIGR00805 55 SLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVI-------GIGCAIMGLGSFLLS--LPHFLSGRY 125 (633)
T ss_pred hchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEE-------EecHHHHHHHHHHHh--ChHHhcCCc
Confidence 44555588999999999999999999999999999999999988762 222222211111111 110
Q ss_pred ----------------------C--------------------CChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCC
Q 017535 168 ----------------------D--------------------PSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEK 205 (370)
Q Consensus 168 ----------------------~--------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 205 (370)
. ...+..+.+..++.|++.+...+ ...+++.|.+|++
T Consensus 126 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~-~~~~~i~d~~~~~ 204 (633)
T TIGR00805 126 SYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFP-LGISYIDDFAKSK 204 (633)
T ss_pred cccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchh-cCchhhhccCCcc
Confidence 0 11244566788899998888888 8899999999999
Q ss_pred chhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 206 SRTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 206 ~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
+|+...|+.+....+|.++|+.++|++.+.+
T Consensus 205 ~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~ 235 (633)
T TIGR00805 205 NSPLYIGILESIAVFGPAFGYLLGSFCLQIY 235 (633)
T ss_pred ccHHHHHHHHHHHHhhhHHHHHHHHHHHhcc
Confidence 9999999999999999999999999998765
No 186
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.05 E-value=5.1e-09 Score=95.63 Aligned_cols=140 Identities=16% Similarity=0.185 Sum_probs=91.5
Q ss_pred HHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCC-
Q 017535 93 SFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPS- 170 (370)
Q Consensus 93 ~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 170 (370)
.|++.|+ +.+|+++.++|++.++..+..++..++.|+++||.++|.-+++.. ++++.....+....+ ...+....
T Consensus 20 ~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~--i~~~~~~~~i~~~~~-~~~~~~~~~ 96 (437)
T TIGR00792 20 TYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPW--LLIGAIPFSIVLVLL-FTTPDFSAT 96 (437)
T ss_pred HHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchh--HHHhHHHHHHHHHHH-HhCCCCCcc
Confidence 6778888 789999999999999999999999999999999854332211111 222222222222222 22222211
Q ss_pred -hhHHHHHHHHHHHHHHHhcCCCCccchhcccc-CCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 171 -TPVMHGLVLVVTGLFISWNAPATNNPIFAEIV-PEKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 171 -~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
..+.+.+..++.+.+.+...+ +..++..+.. ++++|+...++.+....+|+.+++.+.+.+....
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~-~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~ 163 (437)
T TIGR00792 97 GKLVYAYITYILLGLFYSFVNI-PYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYF 163 (437)
T ss_pred hHHHHHHHHHHHHHHHHHhhcc-cHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 123334444555655555444 5567777766 4678999999999999999988888877777654
No 187
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.03 E-value=2e-08 Score=89.01 Aligned_cols=129 Identities=13% Similarity=0.017 Sum_probs=95.9
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCChh
Q 017535 93 SFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTP 172 (370)
Q Consensus 93 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (370)
..+|.+.+++|++..+.+++.+...++..++.++.|+++||+|+|+. ..++..+..... ... .. +. .
T Consensus 21 ~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~-------~~~~~~~~~~~~-~~~-~~---~~-~ 87 (355)
T TIGR00896 21 PLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERS-------VAAGLLLIAAGI-LIR-SA---PG-T 87 (355)
T ss_pred ccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHH-------HHHHHHHHHHHH-HHH-Hh---cc-H
Confidence 45677779999999999999999999999999999999999999976 333332222111 111 11 22 3
Q ss_pred HHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 173 VMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 173 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
+.+.+..++.|++.+...+ .....+.+..| ++|+.+.++.+....+|..+++.+.+.+.+..
T Consensus 88 ~~l~~~~~~~g~g~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~ 149 (355)
T TIGR00896 88 ALLFAGTALIGVGIAIINV-LLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHS 149 (355)
T ss_pred HHHHHHHHHHHHHHHHHhc-cchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3455666777777766555 55667777665 57999999999999999999999998887764
No 188
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.02 E-value=1.5e-07 Score=85.31 Aligned_cols=219 Identities=10% Similarity=0.013 Sum_probs=120.1
Q ss_pred CchhHHHHHHHHHHHHHHHHHHhcCCCCC-CCCCC--CCCccccCcccchhhhhhHHHHhhhccchHHHHHHHHHhhhhh
Q 017535 11 GWRISFHIVGLISVVVGTLVRLFANDPHF-PDGGT--ANSDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVAQGVTGSF 87 (370)
Q Consensus 11 gWr~~f~i~~~~~~i~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (370)
+.|+.|++.+++.++..++..+..||.+. .+.+. ++.++..+.......++.++.++++ .|.++.++...++.+.
T Consensus 195 ~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~m--P~~m~~l~~vqffsW~ 272 (477)
T TIGR01301 195 NLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFINSEAAPPSKHGEEAFFGELFGAFKYL--PRPVWILLLVTCLNWI 272 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccchhhhcccccccchhhhHHHHHHHHHHC--CHHHHHHHHHHHHHHH
Confidence 56889999888888888888888888322 11111 0000000100111112333333332 3346666666666666
Q ss_pred h-HHHHHHHHHHH-H-HhCCCHH------HH---HHHH-HHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHH
Q 017535 88 P-WSALSFAAMWL-E-LTGFSHE------KT---AFLM-ALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSA 154 (370)
Q Consensus 88 ~-~~~~~~~~~~~-~-~~g~s~~------~~---~~~~-~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~ 154 (370)
. +.+..|.+.|. + .++.++. +. |.+. ....+...+.+++..++.+|+|+|+. ...++.++.
T Consensus 273 a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~------~~~~s~~~~ 346 (477)
T TIGR01301 273 AWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAGKR------LWGIVNIIL 346 (477)
T ss_pred HHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchh------HHHHHHHHH
Confidence 6 44557777877 3 4543321 11 2222 23345555666777778888875433 123332222
Q ss_pred HHHHHHH-HHhC-CC--------------CCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCC--CchhHHHHHHHH
Q 017535 155 IPLAALL-LLVL-PD--------------DPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPE--KSRTSVYAMDRS 216 (370)
Q Consensus 155 ~~~~~~~-~~~~-~~--------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~g~~~~~~~~ 216 (370)
....... +... .+ .....+...+.+...|+..+.... ..++++++..++ +..|..+|+.|.
T Consensus 347 ~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~s-iPfal~s~~~~~~~~~~G~~mgilN~ 425 (477)
T TIGR01301 347 AICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYS-IPFALASIRSSNLGAGQGLSMGVLNL 425 (477)
T ss_pred HHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHH-HhHHHHHHHccccCCCCcchhhHHHH
Confidence 2222211 1111 00 001023445555566665555444 459999998884 556999999999
Q ss_pred HHHHhhchhhHHHHHHHHhhcC
Q 017535 217 FESILSSFAPPVVGILAQHVYG 238 (370)
Q Consensus 217 ~~~~~~~~~~~~~g~l~~~~~g 238 (370)
+..+.+.+.....|.+.+..++
T Consensus 426 ~I~lpQii~sl~~g~~~~~~g~ 447 (477)
T TIGR01301 426 AIVIPQIIVSLGSGPWDQLFGG 447 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999988887777643
No 189
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.01 E-value=1.7e-08 Score=91.45 Aligned_cols=136 Identities=13% Similarity=0.123 Sum_probs=91.6
Q ss_pred HHHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHH----HhhhCCCchhHHHHHHHHHHHHHHHHHHHH
Q 017535 89 WSAL-SFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDF----LSARFPNSGRIILAQISSLSAIPLAALLLL 163 (370)
Q Consensus 89 ~~~~-~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (370)
|... .+++.|++.+|.++...+++.....+.+++..++.|+++|| +|||++ .++.......+...++.
T Consensus 20 ~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp-------~il~g~~~~~~~l~ll~ 92 (477)
T TIGR01301 20 WALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRP-------FIAAGAALVAFAVILIG 92 (477)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHH-------HHHHHHHHHHHHHHHHH
Confidence 4444 67788889999999999999999999999999999999994 888876 22221222211111111
Q ss_pred hCCC-----------CCCh--hHHHHHHHHHHHHHHHhcCCCCccchhccccCCCch--hHHHHHHHHHHHHhhchhhHH
Q 017535 164 VLPD-----------DPST--PVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSR--TSVYAMDRSFESILSSFAPPV 228 (370)
Q Consensus 164 ~~~~-----------~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~ 228 (370)
.... .... .+...+.+.+..++.....+ +..+++.|.+|+++| +.+.++.+.+.++|+.+|+.+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~-p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~ 171 (477)
T TIGR01301 93 FAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQG-PCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAA 171 (477)
T ss_pred hCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHH-HHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111 0000 12222333333445554455 568899999998765 689999999999999999998
Q ss_pred HHHH
Q 017535 229 VGIL 232 (370)
Q Consensus 229 ~g~l 232 (370)
++..
T Consensus 172 g~~~ 175 (477)
T TIGR01301 172 GAYS 175 (477)
T ss_pred HHHH
Confidence 8865
No 190
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.01 E-value=1.5e-08 Score=93.85 Aligned_cols=113 Identities=17% Similarity=0.170 Sum_probs=78.4
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCC----hhHHHHHHHHHHHHHHHh
Q 017535 113 MALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPS----TPVMHGLVLVVTGLFISW 188 (370)
Q Consensus 113 ~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~g~~~~~ 188 (370)
.+...++..+|.++.|+++||+|||+. +.++.++..+.... ....++... ....+.+..++.|++.+.
T Consensus 63 ~~~~~l~~~ig~~~~G~l~Dr~Grr~~-------l~~~~~l~~i~~~~-~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~ 134 (490)
T PRK10642 63 FSVPFLIRPLGGLFFGMLGDKYGRQKI-------LAITIVIMSISTFC-IGLIPSYATIGIWAPILLLLCKMAQGFSVGG 134 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccHHH-------HHHHHHHHHHHHHH-HHhcccHHHHHHHHHHHHHHHHHHHHhHhHh
Confidence 355678899999999999999999976 33333333222222 111221110 012356777888998888
Q ss_pred cCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHH
Q 017535 189 NAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQ 234 (370)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~ 234 (370)
..+ ...+++.|.+|+++||...++......+|..+++.+...+..
T Consensus 135 ~~~-~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~ 179 (490)
T PRK10642 135 EYT-GASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLIST 179 (490)
T ss_pred hHH-HHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 887 788999999999999999999888877888777766655443
No 191
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.99 E-value=2.1e-09 Score=81.37 Aligned_cols=109 Identities=14% Similarity=0.204 Sum_probs=79.3
Q ss_pred HHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCc
Q 017535 115 LFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATN 194 (370)
Q Consensus 115 ~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 194 (370)
...++..++.++.|++.||++||+. ...+............ .. . ..+.+.+..++.|++.+...+ ..
T Consensus 6 ~~~~~~~~~~~~~g~~~d~~g~~~~-------~~~~~~~~~~~~~~~~--~~--~-~~~~~~~~~~~~g~~~~~~~~-~~ 72 (141)
T TIGR00880 6 GYALGQLIYSPLSGLLTDRFGRKPV-------LLVGLFIFVLSTAMFA--LS--S-NITVLIIARFLQGFGAAFALV-AG 72 (141)
T ss_pred eehhHHHHHHhhHHHHHhhcchhHH-------HHHHHHHHHHHHHHHH--Hh--c-cHHHHHHHHHHHHHHHHHHHH-hH
Confidence 4567888899999999999998875 2332222222211111 11 1 234455566777777776666 77
Q ss_pred cchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 195 NPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 195 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
.+++.+..|+++|+++.++.+....++..++|.+.+.+.+..
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 114 (141)
T TIGR00880 73 AALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFL 114 (141)
T ss_pred HHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhccc
Confidence 888999999999999999999999999999999999988764
No 192
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.96 E-value=5e-08 Score=89.90 Aligned_cols=138 Identities=12% Similarity=0.101 Sum_probs=91.1
Q ss_pred HHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHH----hhhCCCchhHHHHHHHHHHHHHHHHHHHHhC
Q 017535 91 ALSFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFL----SARFPNSGRIILAQISSLSAIPLAALLLLVL 165 (370)
Q Consensus 91 ~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (370)
...|++.|+ +..|+++..+|.++.+.-+..++..++.|+++||. |||++. +.++..... +...+++..
T Consensus 25 ~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~------il~g~i~~~-i~~~llf~~ 97 (473)
T PRK10429 25 VYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPW------ILIGTLANS-VVLFLLFSA 97 (473)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchh------HhhhhHHHH-HHHHHHHcC
Confidence 346788888 77899999999999999999999999999999954 776651 222322222 222222222
Q ss_pred CCCCC--hhHHHHHHHHHHHHHHHhcCCCCccchhcccc-CCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 166 PDDPS--TPVMHGLVLVVTGLFISWNAPATNNPIFAEIV-PEKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 166 ~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
+..+. ..+.+.+..++.+++...... +..++..+.. ++++|...++....+.++++.+.+.+...+.+..
T Consensus 98 p~~~~~~~~~~~~~~~~l~~~~~t~~~i-p~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~ 170 (473)
T PRK10429 98 HLFEGTAQYVFVCVTYILWGMTYTIMDI-PFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYV 170 (473)
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHHHcc-hHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 21111 122333334444555555555 6678888877 5788999999888888888777776666555544
No 193
>PRK09952 shikimate transporter; Provisional
Probab=98.95 E-value=3.4e-08 Score=90.10 Aligned_cols=145 Identities=14% Similarity=0.118 Sum_probs=89.9
Q ss_pred HHhhhhhhHHHHH-HHHHHH-HHh--CCCHHHHHHHH-----HHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHH
Q 017535 81 QGVTGSFPWSALS-FAAMWL-ELT--GFSHEKTAFLM-----ALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISS 151 (370)
Q Consensus 81 ~~~~~~~~~~~~~-~~~~~~-~~~--g~s~~~~~~~~-----~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 151 (370)
..++.+.-..... ..|.+. +++ +.++. .+.+. +...++..+|.++.|+++||+|||+. +.++.
T Consensus 30 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~-------l~~~~ 101 (438)
T PRK09952 30 GAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRM-------LMLTV 101 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHH-------HHHHH
Confidence 3333333333343 334455 444 66665 34432 23345667888999999999999976 33333
Q ss_pred HHHHHHHHHHHHhCCCCCC----hhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhH
Q 017535 152 LSAIPLAALLLLVLPDDPS----TPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPP 227 (370)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 227 (370)
.+..... +.....++... ..+.+.+..++.|++.+...+ ....++.|..|+++|+...+..+....+|..+++.
T Consensus 102 ~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~-~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~ 179 (438)
T PRK09952 102 WMMGIAT-ALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWG-GAALLAVESAPKNKKAFYSSGVQVGYGVGLLLSTG 179 (438)
T ss_pred HHHHHHH-HHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHH-HHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 2222221 11111111111 012355667888998887777 66889999999999999999988888888888877
Q ss_pred HHHHHHHh
Q 017535 228 VVGILAQH 235 (370)
Q Consensus 228 ~~g~l~~~ 235 (370)
+.+.+...
T Consensus 180 ~~~~l~~~ 187 (438)
T PRK09952 180 LVSLISMM 187 (438)
T ss_pred HHHHHHHh
Confidence 77766544
No 194
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.95 E-value=1.1e-08 Score=90.19 Aligned_cols=160 Identities=16% Similarity=0.179 Sum_probs=110.0
Q ss_pred hhccchH-HHHHHHHHhhh-hhhHHHHHHHHHHH-HHhC----CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHH-hhhCC
Q 017535 68 SVIKIPS-FQIIVAQGVTG-SFPWSALSFAAMWL-ELTG----FSHEKTAFLMALFVIASSLGGLFGGRMGDFL-SARFP 139 (370)
Q Consensus 68 ~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~g----~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~ 139 (370)
..+++|+ ++.++..-+.- +..|++-..+..|+ ...+ ++.+++.-+++.+....-+..+++||++||+ |+|+.
T Consensus 15 ~~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~t 94 (498)
T COG3104 15 KFFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRT 94 (498)
T ss_pred ccCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHH
Confidence 3566665 44444433333 34466666777777 6666 9999998888888777778899999999995 77765
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCC--chhHHHHHHHHH
Q 017535 140 NSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEK--SRTSVYAMDRSF 217 (370)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~g~~~~~~~~~ 217 (370)
++++.++..+.-.+ +..+... ....+.+.+..++++.|..=+ +..+++.+.+|++ +|-.++++..+.
T Consensus 95 -------I~lGail~~iGh~~--L~~~~~~-~~~gl~i~L~~I~iG~Gl~K~-NiS~llg~ly~~~DprrD~gFt~fY~~ 163 (498)
T COG3104 95 -------IVLGAILMAIGHLV--LAISSVS-GPGGLYIGLALIIVGTGLFKP-NISSLLGELYPKDDPRRDGGFTLFYMG 163 (498)
T ss_pred -------HHHHHHHHHHHHHH--Hhccccc-cccHHHHHHHHHHhccccccc-cHHHHHHHhcCCCCcccCCCccEEEEE
Confidence 34443333322222 2222201 122355666667788888888 8889999988753 377788888899
Q ss_pred HHHhhchhhHHHHHHHHhhcCC
Q 017535 218 ESILSSFAPPVVGILAQHVYGF 239 (370)
Q Consensus 218 ~~~~~~~~~~~~g~l~~~~~g~ 239 (370)
.++|+.++|.+.+++.+.+ ||
T Consensus 164 iNiGsl~~p~i~~~~~~~~-g~ 184 (498)
T COG3104 164 INIGSLIAPIITGLLAINY-GW 184 (498)
T ss_pred eehHHHHHHHHHHHHHHhh-CH
Confidence 9999999999999999988 53
No 195
>PRK15075 citrate-proton symporter; Provisional
Probab=98.94 E-value=4e-08 Score=89.60 Aligned_cols=133 Identities=15% Similarity=0.075 Sum_probs=86.2
Q ss_pred HHHHHHHHHhCCCHHHHHHH-HHHH-----HHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCC
Q 017535 93 SFAAMWLELTGFSHEKTAFL-MALF-----VIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLP 166 (370)
Q Consensus 93 ~~~~~~~~~~g~s~~~~~~~-~~~~-----~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (370)
...|.+.++++.+..+.+.+ .+.. .+...++.++.|+++||+|||+. ...+..+....... .. +.
T Consensus 36 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~-------l~~~~~~~~~~~~l-~~-~~ 106 (434)
T PRK15075 36 FYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKG-------LIVTLSIMASGTLL-IA-FV 106 (434)
T ss_pred HHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHH-------HHHHHHHHHHHHHH-HH-hC
Confidence 45566668888877664433 2221 22334788999999999999976 33333332222222 11 22
Q ss_pred CCCCh-----hHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHh
Q 017535 167 DDPST-----PVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQH 235 (370)
Q Consensus 167 ~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~ 235 (370)
.+... ...+.+..++.|++.+...+ ....++.|.+|+++|+.+.++.+...+++..+++.+++.+...
T Consensus 107 ~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~-~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~~l~~~ 179 (434)
T PRK15075 107 PGYATIGLAAPLLVLLGRLLQGFSAGVELG-GVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALLGYLLNQW 179 (434)
T ss_pred CcHHHHHHHHHHHHHHHHHHhhccccccHH-HHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 11110 01245566778887776666 5678899999999999999999999999888888887776543
No 196
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.92 E-value=1.1e-07 Score=85.56 Aligned_cols=147 Identities=14% Similarity=-0.035 Sum_probs=86.7
Q ss_pred HHhhhhhhHHHH-HHHHHHHHHhCCCHHHHHHHH--HHHHHHHHHhHHHH-HHHHHHHhhhCCCchhHHHHHHHHHHHHH
Q 017535 81 QGVTGSFPWSAL-SFAAMWLELTGFSHEKTAFLM--ALFVIASSLGGLFG-GRMGDFLSARFPNSGRIILAQISSLSAIP 156 (370)
Q Consensus 81 ~~~~~~~~~~~~-~~~~~~~~~~g~s~~~~~~~~--~~~~~~~~ig~~~~-g~l~dr~~~~~~~~~~~~~~~~~~~~~~~ 156 (370)
..+.....+++. .++|.++++.|.+..+.|++. ....+...+..++. ++..||.|||+. .++.+.+...
T Consensus 9 ly~~~g~~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~-------~i~~~~~~~~ 81 (390)
T TIGR02718 9 LYLSQGIPIGLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRS-------WVLPMQCLVS 81 (390)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchh-------HHHHHHHHHH
Confidence 334445554444 688999999999999999973 45567776666666 557888887765 2222222111
Q ss_pred HHHHHHHhC-CCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHh
Q 017535 157 LAALLLLVL-PDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQH 235 (370)
Q Consensus 157 ~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~ 235 (370)
.....+... +......+ .....+..++......+ ...++..+..+++.++...+.......+|..+++...+++.+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~d~-~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~ 159 (390)
T TIGR02718 82 ACLASLALVGPDVAGAGW-AVGLLACASLASATQDI-ATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGK 159 (390)
T ss_pred HHHHHHHcCCcchhhHHH-HHHHHHHHHHHHHHHHH-HHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111111111 11111122 22233334444444434 4455566666667677777777777788888888888888887
Q ss_pred h
Q 017535 236 V 236 (370)
Q Consensus 236 ~ 236 (370)
.
T Consensus 160 ~ 160 (390)
T TIGR02718 160 F 160 (390)
T ss_pred h
Confidence 6
No 197
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.92 E-value=1.1e-07 Score=88.10 Aligned_cols=116 Identities=11% Similarity=-0.079 Sum_probs=68.9
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHh--CC--CCCChhHHHHHHHHHHHH
Q 017535 109 TAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLV--LP--DDPSTPVMHGLVLVVTGL 184 (370)
Q Consensus 109 ~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~g~ 184 (370)
.+++.++..+..++..++.+++-+|.++|... .....++.++.......+... .. +...+.+......++.++
T Consensus 318 ~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~---~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ 394 (500)
T PRK09584 318 PEQYQALNPFWIMIGSPILAAIYNKMGDRLPM---PHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSI 394 (500)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCc---HHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHH
Confidence 45555666666677777777777777666432 222333323222221111111 11 111223456667788888
Q ss_pred HHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHH
Q 017535 185 FISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPV 228 (370)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 228 (370)
+.....| ...+++.+..|++.||+.+|+......++..++..+
T Consensus 395 ge~~~~p-~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~ 437 (500)
T PRK09584 395 GELMISG-LGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYV 437 (500)
T ss_pred HHHHHhH-HHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888 889999999999999999997665555444444333
No 198
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.90 E-value=2.2e-07 Score=79.94 Aligned_cols=133 Identities=12% Similarity=0.053 Sum_probs=106.2
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCChh
Q 017535 93 SFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTP 172 (370)
Q Consensus 93 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (370)
...|.+.+.++++..+++++......+..++++..|++.+|+|.|+. ++++..+.. +.+.+++..+... .+
T Consensus 34 iLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~g-------i~lgL~l~a-vg~~lF~pAa~~~-~y 104 (422)
T COG0738 34 ILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAG-------IVLGLLLYA-VGAALFWPAASSK-SY 104 (422)
T ss_pred hhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHH-------HHHHHHHHH-HHHHHHhhhhhhh-hH
Confidence 45566669999999999999999999999999999999999999976 444444333 3334443223322 35
Q ss_pred HHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHh
Q 017535 173 VMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQH 235 (370)
Q Consensus 173 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~ 235 (370)
..+++.++..+.+.+..-. ..+.++....+++....-..+...+..+|+.++|.+++.+..+
T Consensus 105 ~~FL~~lFila~Gi~~Let-aaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils 166 (422)
T COG0738 105 GFFLVALFILASGIGLLET-AANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILS 166 (422)
T ss_pred HHHHHHHHHHHhhhHHHHh-ccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHh
Confidence 5567777888888888777 7889999999998888889999999999999999999999885
No 199
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.88 E-value=1.1e-08 Score=89.83 Aligned_cols=157 Identities=18% Similarity=0.195 Sum_probs=89.5
Q ss_pred ccchHHHHHHHHHhhhhhhHHHH-HHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHH
Q 017535 70 IKIPSFQIIVAQGVTGSFPWSAL-SFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILA 147 (370)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~ 147 (370)
+||+.++.+....+..+..++.. .+.|.|+ +..|++..++|.+++...+..++.+++.|.++||++.||. .++.+
T Consensus 4 ~~~~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~---Ll~~i 80 (412)
T PF01306_consen 4 FKNKNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKH---LLWFI 80 (412)
T ss_dssp CHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSH---HHHHH
T ss_pred ccCchHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHH---HHHHH
Confidence 45677666655555555556555 7889999 5699999999999999999999999999999999998876 11111
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCC---CccchhccccCCCchhHHHHHHHHHHHHhhch
Q 017535 148 QISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPA---TNNPIFAEIVPEKSRTSVYAMDRSFESILSSF 224 (370)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 224 (370)
.+..++..+.....+....+.+. + +..+..++..+...++ ..-+++.+ . .++.+.-+|=..+.+.+|.++
T Consensus 81 ~~l~~l~~pff~~v~~pll~~n~--~---lg~iig~i~l~~~f~~~~~~~Ea~~er-~-sr~~~feYG~~R~wGSig~ai 153 (412)
T PF01306_consen 81 AILLLLFGPFFIYVFGPLLQSNF--W---LGAIIGGIYLGLVFNAGVPLSEAYAER-V-SRRNGFEYGRARMWGSIGFAI 153 (412)
T ss_dssp HHHHHTCHHHHHHTHHHHHHTT---H---HHHHHTTTTTTTTTTTHHHHHHHHHHH-H-HHHHSS-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH--H---HHHHHHHHHHHHHHcccchHHHHHHHH-H-HHHhcCCcchHHHHhhHHHHH
Confidence 11111111111111110001111 1 1111111111221210 11122211 2 234666788889999999999
Q ss_pred hhHHHHHHHHhh
Q 017535 225 APPVVGILAQHV 236 (370)
Q Consensus 225 ~~~~~g~l~~~~ 236 (370)
+..++|.+.+..
T Consensus 154 ~s~~~G~L~~i~ 165 (412)
T PF01306_consen 154 ASLLAGILFNIN 165 (412)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHhheeeeeC
Confidence 999999998854
No 200
>PRK09669 putative symporter YagG; Provisional
Probab=98.88 E-value=8.1e-08 Score=87.87 Aligned_cols=138 Identities=12% Similarity=0.081 Sum_probs=90.0
Q ss_pred HHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHH----hhhCCCchhHHHHHHHHHHHHHHHHHHHHhC
Q 017535 91 ALSFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFL----SARFPNSGRIILAQISSLSAIPLAALLLLVL 165 (370)
Q Consensus 91 ~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (370)
...|++.|+ +.+|+++..+|.++.+..+...+..++.|+++||. |||++ . ++.+.+...+...+.+ ..
T Consensus 28 ~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp----~--il~~~~~~~i~~~l~f-~~ 100 (444)
T PRK09669 28 VMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRP----Y--LLWFAIPFGVVCLLTF-YT 100 (444)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcch----h--HHHHHHHHHHHHHHHH-hC
Confidence 346788888 88999999999999999999999999999999994 44444 1 2222222222222222 23
Q ss_pred CCCC--ChhHHHHHHHHHHHHHHHhcCCCCccchhcccc-CCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 166 PDDP--STPVMHGLVLVVTGLFISWNAPATNNPIFAEIV-PEKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 166 ~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
+..+ ...+.+.+..++.+.+...... +..++..+.. ++++|+...+......++|+.+++.+...+....
T Consensus 101 p~~~~~~~~~~~~~~~~l~~~~~t~~~i-p~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~ 173 (444)
T PRK09669 101 PDFGATGKIIYACVTYILLSLVYTAINV-PYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDIL 173 (444)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHhhcc-hHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3211 1122333333344444444444 4567777766 4577999999999999999988888777666655
No 201
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.87 E-value=2.2e-08 Score=89.90 Aligned_cols=110 Identities=18% Similarity=0.173 Sum_probs=79.1
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHHHhc
Q 017535 110 AFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWN 189 (370)
Q Consensus 110 ~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 189 (370)
+.+.+++.+++++|+++.++++||+|||.. +.+..++.+.......... .......+.+..++.|+..+..
T Consensus 63 S~~vs~f~iG~~~Gs~~~~~la~~~GRK~~-------l~~~~~l~~~~~~~~~~s~--~~~~~e~li~GR~i~Gl~~gl~ 133 (485)
T KOG0569|consen 63 SLIVSIFFIGGMIGSFSSGLLADRFGRKNA-------LLLSNLLAVLAALLMGLSK--SAPSFEMLILGRLIVGLACGLS 133 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcchHH-------HHHHHHHHHHHHHHHHHHH--HhhhHHHHHHHHHHHHHHhHHH
Confidence 445667789999999999999999999965 2333333222222222111 1222455777888889888877
Q ss_pred CCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHH
Q 017535 190 APATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVV 229 (370)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 229 (370)
.. ....++.|+.|.+.||....+......+|..++..++
T Consensus 134 ~~-~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~ 172 (485)
T KOG0569|consen 134 TG-LVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLG 172 (485)
T ss_pred HH-HHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHc
Confidence 77 7889999999999999999999998888888775543
No 202
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.85 E-value=3.4e-09 Score=92.05 Aligned_cols=148 Identities=12% Similarity=0.082 Sum_probs=85.9
Q ss_pred HHHHHhhhhhhHHHHHHHHHHHHHhCCCHHHHHH--------HHHHHHH-HHHHhHHHHHHHHHHHhhhCCCchhHHHHH
Q 017535 78 IVAQGVTGSFPWSALSFAAMWLELTGFSHEKTAF--------LMALFVI-ASSLGGLFGGRMGDFLSARFPNSGRIILAQ 148 (370)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~--------~~~~~~~-~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~ 148 (370)
....+++....|+...+...+++..|+.+..... ...+... +.+.|..+...++|++||++. .+
T Consensus 310 ~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~i-------q~ 382 (538)
T KOG0252|consen 310 AGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYI-------QL 382 (538)
T ss_pred HHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHH-------HH
Confidence 3444555555566556667777767765433322 2223333 334477788889999999976 33
Q ss_pred HHHHHHHHHHHHHHHhCCCC-CChhHHHHHHHHHHHHHHHhcCC-CCccchhccccCCCchhHHHHHHHHHHHHhhchhh
Q 017535 149 ISSLSAIPLAALLLLVLPDD-PSTPVMHGLVLVVTGLFISWNAP-ATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAP 226 (370)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 226 (370)
.+..+..++.+++ ..+.+ ........++..+..++ +-..| ++...+.+|.+|.+.||++.|+....+.+|+.++.
T Consensus 383 ~GF~~~~i~~~~~--~~~y~~~~~~~Gf~v~y~l~~ff-~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~ 459 (538)
T KOG0252|consen 383 MGFFIMTIFFFVI--AGPYNQLENTIGFVVLYSLTFFF-GNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGA 459 (538)
T ss_pred hhHHHHHHHHHHH--cCCcccccccCceeehHHHHHHH-HhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHH
Confidence 3333333222222 22222 11111111111112221 11222 14566778999999999999999999999999999
Q ss_pred HHHHHHHHh
Q 017535 227 PVVGILAQH 235 (370)
Q Consensus 227 ~~~g~l~~~ 235 (370)
....++.++
T Consensus 460 ~~F~~~t~~ 468 (538)
T KOG0252|consen 460 FGFLYLTDH 468 (538)
T ss_pred HHhhHhhhc
Confidence 998888884
No 203
>PRK11462 putative transporter; Provisional
Probab=98.84 E-value=2e-07 Score=85.42 Aligned_cols=140 Identities=9% Similarity=0.068 Sum_probs=92.1
Q ss_pred HHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCC-C
Q 017535 93 SFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDP-S 170 (370)
Q Consensus 93 ~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 170 (370)
+|+..|+ +..|+++..+|.++.+.-+...+.-++.|+++||...|.-+++.. ++++.+...+...+ ++..+..+ .
T Consensus 30 ~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~--il~g~i~~~i~~~l-lf~~p~~s~~ 106 (460)
T PRK11462 30 LYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPW--VLFGALPFGIVCVL-AYSTPDLSMN 106 (460)
T ss_pred HHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchh--HhHHHHHHHHHHHH-HHhCCCCCcc
Confidence 6788888 889999999999999999999999999999999854332211111 22222222222222 22233211 1
Q ss_pred h-hHHHHHHHHHHHHHHHhcCCCCccchhccccC-CCchhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 171 T-PVMHGLVLVVTGLFISWNAPATNNPIFAEIVP-EKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 171 ~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
. .+.+.+..+++..+...... +..++..+..+ +++|++.++......++|+.+++.+...+....
T Consensus 107 ~~~~y~~~~~~~~~~~~t~~~i-py~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~ 173 (460)
T PRK11462 107 GKMIYAAITYTLLTLLYTVVNI-PYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLI 173 (460)
T ss_pred hHHHHHHHHHHHHHHHHHHHhc-cHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1 22334444444555555454 56777777765 678999999999999999888888877777665
No 204
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.84 E-value=2.3e-08 Score=85.42 Aligned_cols=127 Identities=19% Similarity=0.222 Sum_probs=101.8
Q ss_pred hCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHH
Q 017535 102 TGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVV 181 (370)
Q Consensus 102 ~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (370)
.+-+..++|++++...+..++.+++.|.+.||+|+|.+ ++++.++......++. +. . ..+.+.+...+
T Consensus 101 ~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ip-------m~~Gl~vmf~sTilFa--fg--~-sy~~l~vAR~L 168 (464)
T KOG3764|consen 101 LDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIP-------MVAGLFVMFLSTILFA--FG--N-SYPMLFVARSL 168 (464)
T ss_pred ccccccchhHHHHHHHHHHHHhcccchhhHHHhccccH-------HHHHHHHHHHHHHHHH--Hc--c-hhHHHHHHHHH
Confidence 45567889999999999999999999999999999977 5555555443333322 21 2 24467788888
Q ss_pred HHHHHHhcCCCCccchhccccCCCc-hhHHHHHHHHHHHHhhchhhHHHHHHHHhhcCCCCC
Q 017535 182 TGLFISWNAPATNNPIFAEIVPEKS-RTSVYAMDRSFESILSSFAPPVVGILAQHVYGFKPI 242 (370)
Q Consensus 182 ~g~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~~g~~~~ 242 (370)
.|++.+.... ...+++++.+|.+. |++++|+.-.+..+|-.+||+++|.+.+.. |+...
T Consensus 169 QgvgsA~~~t-sglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~-Gk~aP 228 (464)
T KOG3764|consen 169 QGVGSAFADT-SGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFA-GKSAP 228 (464)
T ss_pred hhhhHHHHHh-hhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhc-CCcCc
Confidence 9998877777 77999999998765 699999999999999999999999999998 76655
No 205
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.84 E-value=1.6e-08 Score=85.91 Aligned_cols=119 Identities=21% Similarity=0.184 Sum_probs=89.6
Q ss_pred hCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHH
Q 017535 102 TGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVV 181 (370)
Q Consensus 102 ~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (370)
.+.+....|++.+.+.++..+.++..|.++||+|||.. +.+++ ++..+ ....+.. ..+...+.+..+.
T Consensus 63 ~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpv-------ll~c~-~~va~-s~ll~~~---S~~F~afv~aR~l 130 (451)
T KOG2615|consen 63 DGASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPV-------LLACL-IGVAL-SYLLWAL---SRNFAAFVLARFL 130 (451)
T ss_pred ccccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHH-------HHHHH-HHHHH-HHHHHHH---HHHHHHHHHHHHh
Confidence 34456778899999999999999999999999999965 23332 22222 2222211 1223334445788
Q ss_pred HHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHH
Q 017535 182 TGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQ 234 (370)
Q Consensus 182 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~ 234 (370)
.|++-+... +..++++|+++++.|+.+++.++....+|-.+||.++|++..
T Consensus 131 ~Gi~kgnl~--v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 131 GGIFKGNLS--VIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred hhhccCchH--HHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 888776544 468999999999999999999999999999999999999887
No 206
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.82 E-value=1.8e-07 Score=87.07 Aligned_cols=149 Identities=11% Similarity=0.060 Sum_probs=86.8
Q ss_pred HHHHHHhhhhhh-HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHH---
Q 017535 77 IIVAQGVTGSFP-WSALSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSL--- 152 (370)
Q Consensus 77 ~~~~~~~~~~~~-~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~--- 152 (370)
.+.+..+..... +....|.+.+++..|.+... .....+.++..+++.+++.++.||+|||+. ++.+..
T Consensus 299 ~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~l-------ll~s~~~m~ 370 (513)
T KOG0254|consen 299 GLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKL-------LLFGAAGMS 370 (513)
T ss_pred HHHHHHHHHHhCCceEEeehHHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHH-------HHHhHHHHH
Confidence 344444444444 33336788888887877543 444445577788888888999999999976 222222
Q ss_pred HHHHHHHHHHHhCCCC-----C-ChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhh
Q 017535 153 SAIPLAALLLLVLPDD-----P-STPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAP 226 (370)
Q Consensus 153 ~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 226 (370)
++.............. . ..+.+...+++...+.. ...| +.+.+..|.+|.+.|+.+.++...+..+...+-.
T Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~-g~g~-v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~ 448 (513)
T KOG0254|consen 371 ICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAI-GWGP-VPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLIS 448 (513)
T ss_pred HHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhc-cccc-chhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHH
Confidence 2221111221111111 1 11222233333333333 3344 6678889999999999999999999888876655
Q ss_pred HHHHHHHHh
Q 017535 227 PVVGILAQH 235 (370)
Q Consensus 227 ~~~g~l~~~ 235 (370)
...-.+.+.
T Consensus 449 ~~~~~~~~~ 457 (513)
T KOG0254|consen 449 FFFPFITEA 457 (513)
T ss_pred HHHHHHHHh
Confidence 544444444
No 207
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.80 E-value=1.1e-07 Score=88.79 Aligned_cols=121 Identities=21% Similarity=0.198 Sum_probs=95.2
Q ss_pred HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHH
Q 017535 100 ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVL 179 (370)
Q Consensus 100 ~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (370)
+....+.....+..+++.++.++|.++.|.++||+|||+. ...+..+..+.. +... + ..+++.+.+..
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~-------~~~~~~~~~i~~-~~~a-~---a~~~~~~~~~R 178 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPV-------LLVSLLLFIIFG-ILTA-F---APNYWMFLIFR 178 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHH-------HHHHHHHHHHHH-HHHH-H---hCcHHHHHHHH
Confidence 4456677788888889999999999999999999999976 333333333222 2111 1 22366788899
Q ss_pred HHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHH
Q 017535 180 VVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQ 234 (370)
Q Consensus 180 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~ 234 (370)
++.|++.+.... +...++.|.++++.|+.+..+ ..+...++.+++...+++..
T Consensus 179 fl~G~~~~~~~~-~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~ 231 (521)
T KOG0255|consen 179 FLSGFFGSGPLT-VGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR 231 (521)
T ss_pred HHHHhhccchhH-HhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh
Confidence 999999888777 889999999999999999999 88888889888888888776
No 208
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.75 E-value=2.5e-07 Score=85.40 Aligned_cols=149 Identities=18% Similarity=0.168 Sum_probs=87.1
Q ss_pred hccchHHHHHHHHHhhhhhh-HHHH----HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchh
Q 017535 69 VIKIPSFQIIVAQGVTGSFP-WSAL----SFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGR 143 (370)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~ 143 (370)
.+++++++..+..+++.... |..+ ..++....+.|-+ ....++.....++..++.++.|+++|.+|||..
T Consensus 36 ~~~s~~~i~~~~~~~~~~~~~~~~~~~~a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~---- 110 (599)
T PF06609_consen 36 YYRSPRFIASFAAFSLAVIAAYFVLVLPASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYF---- 110 (599)
T ss_pred ceeCHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHH----
Confidence 34566655555444443332 2221 2234444778876 456677777888999999999999999999976
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhc
Q 017535 144 IILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSS 223 (370)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 223 (370)
.+++.++.++ ..+... .. .+...+.....+.|++.|... .....++|..|.+.|+.+.++.....-....
T Consensus 111 ---~i~g~~l~vv-G~Iv~a-tA---~~~~~~iag~~l~GvgaG~~~--~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~ 180 (599)
T PF06609_consen 111 ---FIIGSLLGVV-GSIVCA-TA---QNMNTFIAGMVLYGVGAGVQE--LAALAISELVPNKWRGLGLAIASIPFIITTW 180 (599)
T ss_pred ---HHHHHHHHHh-HHHHhh-cC---CcHHHHHHHHHHHHHhhHHHH--HHHHHHHHhcccchhhhHhHHHHHHHHhhhc
Confidence 3333333332 222211 11 123335555666666655544 3355679999999998877766654444444
Q ss_pred hhhHHHHHH
Q 017535 224 FAPPVVGIL 232 (370)
Q Consensus 224 ~~~~~~g~l 232 (370)
+++.+...+
T Consensus 181 ~~~~ia~~~ 189 (599)
T PF06609_consen 181 ISPLIAQLF 189 (599)
T ss_pred ccHHHHHHh
Confidence 555554433
No 209
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.74 E-value=2.7e-07 Score=75.95 Aligned_cols=140 Identities=15% Similarity=0.180 Sum_probs=92.5
Q ss_pred hhhhhhHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHH
Q 017535 83 VTGSFPWSALSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLL 162 (370)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (370)
......|.+..|.|.+-+.+|+|.++...+.....++..+| ++.|.+.|+++.+.. +.++.+..........
T Consensus 13 ~~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~-------l~iG~~~~~~GY~~~~ 84 (250)
T PF06813_consen 13 LCSGTTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVV-------LLIGAVLGFVGYGLLW 84 (250)
T ss_pred HhcCcccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHHH-------HHHHHHHHHHHHHHHH
Confidence 33344466667778877999999999999999989988875 888999999998854 4455444443333333
Q ss_pred HhCCCC--CChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHH
Q 017535 163 LVLPDD--PSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGIL 232 (370)
Q Consensus 163 ~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l 232 (370)
...... ....|.+.+..++.+.+..+... .......+.+|. +||++.|+.-....+++++-..+...+
T Consensus 85 l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~t-a~lvt~~~NFP~-~RG~vvgilk~~~GLSaai~t~i~~~~ 154 (250)
T PF06813_consen 85 LAVSGRIPSLPVWLMCLFLFLGGNSSCWFNT-ASLVTCVRNFPR-SRGTVVGILKGFFGLSAAIFTQIYSAF 154 (250)
T ss_pred HHHhCccCccchHHHHHHHHHHcccHHHhhh-HHHHHHHHhCcc-ccCceehhhhHHHHhHHHHHHHHHHHH
Confidence 322222 13355566666666665555443 223334456774 699999999998888887765554433
No 210
>PRK09848 glucuronide transporter; Provisional
Probab=98.73 E-value=7.9e-07 Score=81.50 Aligned_cols=126 Identities=17% Similarity=0.233 Sum_probs=73.1
Q ss_pred HHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCC--C
Q 017535 93 SFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDD--P 169 (370)
Q Consensus 93 ~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 169 (370)
.|++.|+ +..|+++.++|.+..+..+..++..++.|+++||.++|+.++... +..+.+........++. .+.. .
T Consensus 29 ~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~ 105 (448)
T PRK09848 29 LFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPF--LLFGTAPLMIFSVLVFW-VPTDWSH 105 (448)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHH--HHHHHHHHHHHHHHHHh-CcCCCCc
Confidence 5677788 678999999999999999999999999999999986554322111 12222222212222221 2211 1
Q ss_pred -ChhHHHHHHHHHHHHHHHhcCCCCccchhcccc-CCCchhHHHHHHHHHHHHhh
Q 017535 170 -STPVMHGLVLVVTGLFISWNAPATNNPIFAEIV-PEKSRTSVYAMDRSFESILS 222 (370)
Q Consensus 170 -~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~ 222 (370)
...+...+..++.+.+.+...+ +..++..+.. ++++|....+......++++
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~-~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~ 159 (448)
T PRK09848 106 SSKVVYAYLTYMGLGLCYSLVNI-PYGSLATAMTQQPQSRARLGAARGIAASLTF 159 (448)
T ss_pred chHHHHHHHHHHHHHHHHHHhcc-cHhhhhhhhcCCHHHHHHHHHHHHHHHHHHH
Confidence 1122233344455655555555 4555555544 34567777666655444443
No 211
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=98.72 E-value=5e-07 Score=81.12 Aligned_cols=108 Identities=20% Similarity=0.204 Sum_probs=73.9
Q ss_pred HHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCC----hhHHHHHHHHHHHHHHHhcCCCC
Q 017535 118 IASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPS----TPVMHGLVLVVTGLFISWNAPAT 193 (370)
Q Consensus 118 ~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~ 193 (370)
++..++.++.|+++||+|||+. ..++.++..... ......++... ..+.+.+..++.|++.+...+ .
T Consensus 46 ~~~~i~~~~~G~l~dr~g~r~~-------l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~-~ 116 (394)
T TIGR00883 46 LARPLGAIVFGHFGDRIGRKKT-------LVITLLMMGIGT-LLIGLLPSYATIGIWAPILLLLARLIQGFSLGGEWG-G 116 (394)
T ss_pred HHhhhHHHHhhhhhhhhhhHHH-------HHHHHHHHHHHH-HHHhhCCChhhhHHHHHHHHHHHHHHHHhhcccccc-c
Confidence 3445788999999999999976 333333332222 22211221111 012345566777887777777 7
Q ss_pred ccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHH
Q 017535 194 NNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQ 234 (370)
Q Consensus 194 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~ 234 (370)
..+++.+..|+++|+...++.+....+|..+++.+.+.+..
T Consensus 117 ~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~ 157 (394)
T TIGR00883 117 AALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSY 157 (394)
T ss_pred cHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78899999999999999999999999999999888776654
No 212
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.70 E-value=9.5e-08 Score=86.95 Aligned_cols=137 Identities=18% Similarity=0.181 Sum_probs=95.9
Q ss_pred HHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHH----HHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCC
Q 017535 93 SFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGD----FLSARFPNSGRIILAQISSLSAIPLAALLLLVLPD 167 (370)
Q Consensus 93 ~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~d----r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (370)
.|++.|+ +..|+++...|++..+..+..++..++.|+++| |+|||++. +.++.....+...+++...+.
T Consensus 22 ~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~------~l~g~i~~~~~~~llf~~~p~ 95 (428)
T PF13347_consen 22 SYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPW------ILIGAILLALSFFLLFSPPPA 95 (428)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceE------eehhhHHHHHHHHHhhccccc
Confidence 5777777 888999999999999999999999999999999 78888772 233333333222222211121
Q ss_pred CC---ChhHHHHHHHHHHHHHHHhcCCCCccchhccccC-CCchhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 168 DP---STPVMHGLVLVVTGLFISWNAPATNNPIFAEIVP-EKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 168 ~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
.. .....+.+..+++.++...... +..++..+..+ +++|....+....+..+|..+...+.+.+.+..
T Consensus 96 ~~~~~~~~~~~~~~~~l~~~~~t~~~i-~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~ 167 (428)
T PF13347_consen 96 GLSFTAKLVWLFVFYILFDIAYTFVQI-PYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWF 167 (428)
T ss_pred hhhhhhHHHHHHHHHHHHHHhhhhccC-chhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhh
Confidence 11 1122234444555666666555 66888888886 468999999999999999988888888888766
No 213
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.69 E-value=1.5e-06 Score=77.54 Aligned_cols=144 Identities=15% Similarity=0.170 Sum_probs=101.5
Q ss_pred HHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCC-
Q 017535 91 ALSFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDD- 168 (370)
Q Consensus 91 ~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 168 (370)
...|+..|+ +..|+++..+|.++.+.=+..++.-++.|.++||..+|+-+++... +.+.+... +.+.+.+..++.
T Consensus 31 ~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~l--L~g~ip~~-i~~~l~F~~p~~~ 107 (467)
T COG2211 31 VVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWL--LWGAIPFA-IVAVLLFITPDFS 107 (467)
T ss_pred HHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHH--HHHhHHHH-HHHHHHHcCCCcc
Confidence 336888888 8899999999999999999999999999999998665544322221 22212222 222222223321
Q ss_pred -CChhHHHHHHHHHHHHHHHhcCCCCccchhccccC-CCchhHHHHHHHHHHHHhhchhhHHHHHHHHhhcC
Q 017535 169 -PSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVP-EKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYG 238 (370)
Q Consensus 169 -~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~~g 238 (370)
...+...++..++.+++...... +..++..+..+ +++|.+..+.-..+.++|+.+...+.+.+....++
T Consensus 108 ~~~k~~ya~vtY~l~~l~YT~vni-Py~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~ 178 (467)
T COG2211 108 MTGKLIYALVTYMLLGLGYTLVNI-PYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGG 178 (467)
T ss_pred cCcchHHHHHHHHHHHHHHHheeC-chhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 23345566667777777776665 66777777654 57899999999999999999999999999888733
No 214
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=98.66 E-value=3.3e-06 Score=75.37 Aligned_cols=156 Identities=15% Similarity=0.115 Sum_probs=98.3
Q ss_pred HHHHhhhccchHHHHHHHHHhhhhhhHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCch
Q 017535 63 IQEAKSVIKIPSFQIIVAQGVTGSFPWSALSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSG 142 (370)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~ 142 (370)
.++++..++++.+...+...++.....++-..+..|+...|+++...|.+-+...+.++.|.++..++.+|+|..+.
T Consensus 249 ~~~w~~Y~~q~vflas~alalLY~TVLsf~~lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~--- 325 (432)
T PF06963_consen 249 IRGWRTYFRQPVFLASFALALLYFTVLSFGGLMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRA--- 325 (432)
T ss_pred hccHHHHHhCHHHHHHHHHHHHHHHHhcCcHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhh---
Confidence 34455667777766655555444443333456678887779999999999999999999999999999999997765
Q ss_pred hHHHHHHHHH---HHHHHHHHHHHhCCCCC---ChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHH
Q 017535 143 RIILAQISSL---SAIPLAALLLLVLPDDP---STPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRS 216 (370)
Q Consensus 143 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 216 (370)
...+.. .++......+ ..+..+ .....+.....+.=++.-..-. ...-+++|.+|+++||+..|+.+.
T Consensus 326 ----G~~~l~~q~~~L~~~v~~~-~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL-~~~qi~Qe~V~~~~Rg~v~gvq~s 399 (432)
T PF06963_consen 326 ----GLWSLWWQWVCLALCVVSF-WAPGSPFSSISAYLLLGGIALSRIGLWSFDL-AVTQIMQENVPESERGAVSGVQNS 399 (432)
T ss_pred ----HHHHHHHHHHHHHHHHHHH-hcCCCCchhhHHHHHHHHHHHHHHHHHhhhH-HHHHhhcccCCHHHhhHHHHHHHH
Confidence 222222 1111111222 233322 1112222222222222222233 556778899999999999999999
Q ss_pred HHHHhhchhhH
Q 017535 217 FESILSSFAPP 227 (370)
Q Consensus 217 ~~~~~~~~~~~ 227 (370)
..++...+.-.
T Consensus 400 l~~lf~ll~~~ 410 (432)
T PF06963_consen 400 LQSLFELLSFV 410 (432)
T ss_pred HHHHHHHHHHH
Confidence 99988766543
No 215
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.63 E-value=3.6e-11 Score=110.22 Aligned_cols=133 Identities=18% Similarity=0.174 Sum_probs=80.4
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHH---HHhCCCCC
Q 017535 93 SFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALL---LLVLPDDP 169 (370)
Q Consensus 93 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 169 (370)
.|.+.+++..+.+.. -.......+...++.+++.++.||+|||+. .+++......+...+ .......+
T Consensus 274 ~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~-------~i~~~~~~~~~~~~~~~~~~~~~~~~ 344 (451)
T PF00083_consen 274 YYSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKL-------LIIGLLLMAICSLILGIIFFLGVSSS 344 (451)
T ss_pred ccccccccccccccc--cccccccccccccccccccccccccccccc-------cccccccccccccccccccccccccc
Confidence 455666677777766 222234456677788888899999999976 233322222221111 11112211
Q ss_pred ---ChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 170 ---STPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 170 ---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
.........++...+..++ .+ ..+.+..|.+|.+.|+++.++...+..+++++++.+...+.+..
T Consensus 345 ~~~~~~~i~~~~l~~~~~~~g~-~~-~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~ 412 (451)
T PF00083_consen 345 SWWSILSIVFLALFFAFFSLGW-GP-LPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNL 412 (451)
T ss_pred cccccccceeeeeccccccccc-cc-cccccccccccccccccccccccccccccccccccccccccccc
Confidence 1111112222222222222 34 55788899999999999999999999999999998888777765
No 216
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.63 E-value=6e-07 Score=79.90 Aligned_cols=164 Identities=12% Similarity=0.076 Sum_probs=109.0
Q ss_pred hhhHHHHhhhccchHHHHHHHHHhhhhhhHHHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhC
Q 017535 60 KVLIQEAKSVIKIPSFQIIVAQGVTGSFPWSAL-SFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARF 138 (370)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~ 138 (370)
...+.+..+++.++...+++..........+.. +++=-++++++..+...|........+-++.-++.+++..|+|+-+
T Consensus 358 ~~v~a~~~~~~~s~~~llff~~av~mG~g~~lv~tFLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~ 437 (618)
T KOG3762|consen 358 SSVLADVGKVFASPHILLFFFVAVVMGAGVGLVFTFLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVN 437 (618)
T ss_pred HHHHHHHHHHhcCCCEEehhHHHHHHHHHHHHHHHHHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccc
Confidence 345666667788877444333333333333333 4553444888877777786666667788888889999999999887
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHH
Q 017535 139 PNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFE 218 (370)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 218 (370)
. +.+++ .+...=++++.+..+ +|.++.+-++.|+..+.... +..+++....||+.++++.++.....
T Consensus 438 v-------~~lgL--a~~~~Rf~~~S~L~n---~W~vLPieilqgit~aliWa-a~~sY~s~vaPp~l~at~Q~l~~g~f 504 (618)
T KOG3762|consen 438 V-------MYLGL--ACNVGRFLYYSYLQN---PWMVLPIEILQGITHALIWA-AIISYASHVAPPGLRATAQGLLQGIF 504 (618)
T ss_pred e-------eeehh--hHHHHHHHHHHHhcC---chheeeHHHHHHHHHHHHHH-HHHHHHHhhCCCcchHHHHHHHHHHh
Confidence 6 22221 111111222222222 44566666777887777776 77889999999999999999977654
Q ss_pred -HHhhchhhHHHHHHHHhh
Q 017535 219 -SILSSFAPPVVGILAQHV 236 (370)
Q Consensus 219 -~~~~~~~~~~~g~l~~~~ 236 (370)
.+|-.+|++++|.+.+.+
T Consensus 505 ~GlG~g~GslIGG~~v~~f 523 (618)
T KOG3762|consen 505 HGLGKGLGSLIGGFVVERF 523 (618)
T ss_pred cccCcchhhhhhhhhheee
Confidence 567799999999999887
No 217
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.63 E-value=1.4e-06 Score=77.86 Aligned_cols=124 Identities=22% Similarity=0.229 Sum_probs=77.0
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCC
Q 017535 91 ALSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPS 170 (370)
Q Consensus 91 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (370)
...++|.|++..|+|..++|.+.+...+..+++.++.|+++||.++++. ...+..+++........ .. ..
T Consensus 21 ~~p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~------~l~~~~l~~~~~~~~~~--~~--~~ 90 (400)
T PF03825_consen 21 FLPYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKR------ILALLSLLSALALLLLA--FS--SS 90 (400)
T ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHH------HHHHHHHHHHHHHHHHH--Hh--cc
Confidence 3468899999999999999999999999999999999999999865543 12222222222111111 11 22
Q ss_pred hhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHH
Q 017535 171 TPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPV 228 (370)
Q Consensus 171 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 228 (370)
.+.+..+.++..+......| ...++..+... .++.-+|-....+.+|-.++...
T Consensus 91 -f~~~~~~~~l~~~~~~p~~p-l~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~ 144 (400)
T PF03825_consen 91 -FWWLFVIMLLFSFFFSPTMP-LSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALA 144 (400)
T ss_pred -HHHHHHHHHHHHHHHccHHH-HHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHH
Confidence 22334444555555554455 55555555443 24555666666666666665444
No 218
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.62 E-value=3.1e-07 Score=80.15 Aligned_cols=123 Identities=19% Similarity=0.153 Sum_probs=85.9
Q ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHH-HHHHhCCCCC-ChhHHHHHHHHH
Q 017535 104 FSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAA-LLLLVLPDDP-STPVMHGLVLVV 181 (370)
Q Consensus 104 ~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~ 181 (370)
+++...+.+.....++.++|+++.||+.||+|||+.. ...+++.+++.+ ..+....+.+ ...+.+....++
T Consensus 81 ~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vY-------G~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~ 153 (538)
T KOG0252|consen 81 YPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVY-------GKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFL 153 (538)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhh-------hHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHH
Confidence 5667788888888999999999999999999999872 222222221221 1111111122 224556777889
Q ss_pred HHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHH
Q 017535 182 TGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQ 234 (370)
Q Consensus 182 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~ 234 (370)
+|++.|.=+| +..+..+|....+.||.-.+....++.+|...|.++.-.+..
T Consensus 154 LGiGIGGDYP-lSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~ 205 (538)
T KOG0252|consen 154 LGIGIGGDYP-LSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSA 205 (538)
T ss_pred hhccccCCCc-chHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHH
Confidence 9999999999 888899998888889999888877777776666555444433
No 219
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.58 E-value=1.3e-06 Score=80.17 Aligned_cols=150 Identities=16% Similarity=0.088 Sum_probs=103.9
Q ss_pred HHHHHHHHhhhhhhHHHH----HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHH
Q 017535 75 FQIIVAQGVTGSFPWSAL----SFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQIS 150 (370)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~ 150 (370)
|...+..++.....+++. .+.+.+.++++.+..+++++.++......+..++.+.+.||+|-|.. .+.+
T Consensus 45 WvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v-------~i~G 117 (509)
T KOG2504|consen 45 WVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTV-------MIAG 117 (509)
T ss_pred eeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHH-------HHHH
Confidence 444444555555444444 23455558899999999999999999999999999999999999976 3444
Q ss_pred HHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHH
Q 017535 151 SLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVG 230 (370)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g 230 (370)
.++......+.. +. ...+.++...-++.|++.+..+. ....++...+ +++|+.++|+......+|..+-|.+..
T Consensus 118 ~~v~~~g~~lss--F~--~~i~~l~lt~gvi~G~G~~~~~~-paiviv~~YF-~kkR~lA~Gia~~GsG~G~~~~~~l~~ 191 (509)
T KOG2504|consen 118 GLVAALGLLLSS--FA--TSLWQLYLTFGVIGGLGLGLIYL-PAVVILGTYF-EKKRALATGIAVSGTGVGTVVFPPLLK 191 (509)
T ss_pred HHHHHHHHHHHH--HH--hhHHHHHHHHHHHhhccchhhhc-chhhhhhhHh-HHHHHHHHhhhhccCCcceeeHHHHHH
Confidence 443332222211 21 22233445555666777777666 5566666555 456999999999999999999999999
Q ss_pred HHHHhhcC
Q 017535 231 ILAQHVYG 238 (370)
Q Consensus 231 ~l~~~~~g 238 (370)
.+.+.. |
T Consensus 192 ~l~~~~-G 198 (509)
T KOG2504|consen 192 YLLSKY-G 198 (509)
T ss_pred HHHHHh-C
Confidence 999987 5
No 220
>PTZ00207 hypothetical protein; Provisional
Probab=98.57 E-value=1.6e-06 Score=80.61 Aligned_cols=203 Identities=14% Similarity=0.065 Sum_probs=120.7
Q ss_pred HHhhhccchHHHHHHHHHhhhhhh-HHHHHHHHHHHHHh-CCCHHH--HHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCC
Q 017535 65 EAKSVIKIPSFQIIVAQGVTGSFP-WSALSFAAMWLELT-GFSHEK--TAFLMALFVIASSLGGLFGGRMGDFLSARFPN 140 (370)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-g~s~~~--~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~ 140 (370)
.+++.+++..+|+++..++++... ..++.-+..+.+.+ |.+.+. ..++.++.++++.+|++.+|.+.....+|+..
T Consensus 345 t~~q~l~~~d~Wll~~~~~cg~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~ 424 (591)
T PTZ00207 345 TFIEGLKTARLWCLLWSIFCCVGAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAE 424 (591)
T ss_pred hHHHHHhchhHHHHHHHHHHhhCchheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccc
Confidence 566777788888776666555544 44445666777777 773322 33367888999999999999999444444311
Q ss_pred --chhHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHH
Q 017535 141 --SGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFE 218 (370)
Q Consensus 141 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 218 (370)
..+...+.+..+ +.+...++++..+. . .+.+..++.|++.|...+ +....+.|++. ++-|+-+-+.....
T Consensus 425 ~r~prt~~l~~~~~-~~~~~lll~~~~p~-~----~L~~~~~lvg~~~G~~~~-~~~~i~selFg-k~~g~~yN~~~~a~ 496 (591)
T PTZ00207 425 DRVPITIALFIPSV-CIITMLTLFLTLPK-A----ALPLPYFIAAFANGFMAA-TIALVTRTIFA-KDPAKHYNFCFLGS 496 (591)
T ss_pred cccchhHHHHHHHH-HHHHHHHHHHHCCc-c----HhHHHHHHHHHHhhHhHH-HHHHHHHHHhc-cchHHHhhHHhHHH
Confidence 112222222222 22222233333221 1 256667777777777777 77888999999 77888888877777
Q ss_pred HHhhchh-hHHHHHHHHhhcCCCCCCCCCCccchhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 017535 219 SILSSFA-PPVVGILAQHVYGFKPIPKGSSATEEIATDRANAASLAKALYTAIGIPMALCCFIYSFLYST 287 (370)
Q Consensus 219 ~~~~~~~-~~~~g~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (370)
-+|..+- -.+.|.+.|+-.. . .....-.+.+.++..+.++.++. +.+++....+..+
T Consensus 497 pigs~~~n~~l~G~~Yd~ea~-k----------~~~~~C~G~~C~~~~~~v~~~~~-~~g~~~s~~l~~R 554 (591)
T PTZ00207 497 VLSAIFLNRLLYGEWYTQQAD-K----------LGQDVCTERVCVVMPLAFLLGLS-FLAFITSTYVHLQ 554 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHh-h----------CCCCeeCCceeeHhHHHHHHHHH-HHHHHHHhheeee
Confidence 7777554 5677888876510 0 00112235556777777665444 3333333333333
No 221
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.55 E-value=2.1e-07 Score=84.34 Aligned_cols=226 Identities=15% Similarity=0.076 Sum_probs=115.3
Q ss_pred CccccccccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCC-CccccCcccchhhhhhHHHHhhhccchHHHHHHH
Q 017535 2 APMTFMGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTAN-SDQVSSKSFRSDVKVLIQEAKSVIKIPSFQIIVA 80 (370)
Q Consensus 2 ~g~~~~~~~gWr~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (370)
.++.+.+..++|+.|.+.+++.++..+..++..+|.+..+..+.. ..++.........++..+.+++.++.|..+...+
T Consensus 143 l~G~l~~~~~~~~~f~i~~~~~~l~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~ 222 (433)
T PF03092_consen 143 LSGPLLDSFGPQGVFLISAALPLLMLIVALFLLEERKVRPADEVFSFGKEEVPCLFGSFREQLSELWRALQQRAIWQPIL 222 (433)
T ss_pred hhhhhhhcCCCeEEehHHHHHHHHHHHHHHHhhhhccccccchhhcccccccchhhHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 356777888999999999888777776666666652111111100 0000001111113566677778888887554433
Q ss_pred -HHhhhhhhHHHHHHHHHHH--HHhC---CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHH
Q 017535 81 -QGVTGSFPWSALSFAAMWL--ELTG---FSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSA 154 (370)
Q Consensus 81 -~~~~~~~~~~~~~~~~~~~--~~~g---~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~ 154 (370)
..++.........-...|+ ...+ +++...+.+..+..++.++|..+......+..-|+. .....++.
T Consensus 223 ~~~~~~~~~~~~~~a~~fy~~~~~~~gp~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~-------~~~t~~~~ 295 (433)
T PF03092_consen 223 FFIFFFNLPPSISSASSFYFQTDALGGPHFSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRI-------FVVTTLVS 295 (433)
T ss_pred HHHHHHHhccCCCCccEEEEEeccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-------HHHHHHHH
Confidence 1111111110000001112 3345 788888877755566666666555443332222211 11111111
Q ss_pred HHHHHHHHHhCCC------CCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHH
Q 017535 155 IPLAALLLLVLPD------DPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPV 228 (370)
Q Consensus 155 ~~~~~~~~~~~~~------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 228 (370)
......-+..... -+..+ ....--++..+....... +...++++..|+...|+.+|+...+.++|..++..+
T Consensus 296 ~~~~l~~~~lv~~~n~~~Gi~d~~-f~lgd~~l~~~~~~i~~m-P~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~l 373 (433)
T PF03092_consen 296 VLASLFDLLLVTRWNLDLGIPDQW-FALGDTILEEVIGMIAFM-PSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTL 373 (433)
T ss_pred HHHhcccEEEEEEEeeeeCcCCeE-EEEEhHHHHHHHHHHHHH-HHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 1111110000000 00101 111111222222222222 346778899999999999999999999999999999
Q ss_pred HHHHHHhh
Q 017535 229 VGILAQHV 236 (370)
Q Consensus 229 ~g~l~~~~ 236 (370)
+..+.+..
T Consensus 374 g~~l~~~~ 381 (433)
T PF03092_consen 374 GAFLMELF 381 (433)
T ss_pred HHHHHHHc
Confidence 99988887
No 222
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.54 E-value=7.7e-06 Score=77.41 Aligned_cols=142 Identities=18% Similarity=0.168 Sum_probs=94.6
Q ss_pred HHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHH-hhhCCCchhHHHHHHHHHHHHHHHHHHHH-hC
Q 017535 89 WSALSFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFL-SARFPNSGRIILAQISSLSAIPLAALLLL-VL 165 (370)
Q Consensus 89 ~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 165 (370)
|++.+.+..|+ +.+|++...+..++..+....-+..+++|+++|++ |+++. +.++.++..+...++.+ ..
T Consensus 4 YGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~t-------Il~~~ii~~lG~~llai~a~ 76 (654)
T TIGR00926 4 YGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKT-------ILYLSIVYVVGHALLSFGAI 76 (654)
T ss_pred eecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH-------HHHHHHHHHHHHHHHHhccC
Confidence 45556667777 77999999998888888777788889999999985 55544 23332222222211111 11
Q ss_pred CCC--CChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCC---chhHHHHHHHHHHHHhhchhhHHHHHHHHhhcC
Q 017535 166 PDD--PSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEK---SRTSVYAMDRSFESILSSFAPPVVGILAQHVYG 238 (370)
Q Consensus 166 ~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~~g 238 (370)
+.. .......++.+.+...+.|..-| +..+...+.++++ .+-..+.+..+..++|+.+++.+.+++.+..++
T Consensus 77 ~~~~~~~~~~~~l~gLaLia~G~GgiKp-~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~ 153 (654)
T TIGR00926 77 PSSGHPLHDLLDLLGLALIALGTGGIKP-CVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGC 153 (654)
T ss_pred cccccchHHHHHHHHHHHHHhhcccccc-CchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 111 11122344556666677787778 8888888888653 366788888889999999999999988766533
No 223
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.54 E-value=2.3e-07 Score=84.39 Aligned_cols=124 Identities=15% Similarity=0.021 Sum_probs=94.4
Q ss_pred HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHH
Q 017535 100 ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVL 179 (370)
Q Consensus 100 ~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (370)
++.++...+.+.+.+++.++.+++.+.++.+.||+...+. +..+.++..+..++-.. ..+.+.+.+..
T Consensus 74 edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~--------l~~~~~~w~~~~~~~~~----~~s~~~~ialr 141 (495)
T KOG2533|consen 74 EDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKG--------LSVSGILWGLFGFLTAA----VHSFPGLIALR 141 (495)
T ss_pred cccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHH--------HHHHHHHHHHHHHHHHH----HhhhHHHHHHH
Confidence 4567778889999999999999999999999999983332 22212211111111111 12244578889
Q ss_pred HHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 180 VVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 180 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
++.|++.+...| ....++...+.++++|..+|+.+....+|+++|+.+...+....
T Consensus 142 ~llGl~es~~wP-~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~ 197 (495)
T KOG2533|consen 142 FLLGLFESGGWP-GVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLN 197 (495)
T ss_pred HHHHHHhcccch-HHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhc
Confidence 999999999999 88999999999999999999999999999999999888876543
No 224
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=98.51 E-value=2.1e-06 Score=77.76 Aligned_cols=55 Identities=16% Similarity=0.188 Sum_probs=45.5
Q ss_pred hhhhHHHH-HHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCC
Q 017535 85 GSFPWSAL-SFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFP 139 (370)
Q Consensus 85 ~~~~~~~~-~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~ 139 (370)
.+..+++. .+++.++ ++.|++..+.|++.+...++.++++++.|+++||+++||.
T Consensus 14 ~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~ 70 (418)
T TIGR00889 14 QWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQK 70 (418)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHH
Confidence 33344444 6778888 7799999999999999999999999999999999976543
No 225
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.51 E-value=3.2e-06 Score=78.80 Aligned_cols=110 Identities=16% Similarity=0.224 Sum_probs=83.7
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHHH
Q 017535 108 KTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFIS 187 (370)
Q Consensus 108 ~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 187 (370)
+.+++.+...++..++.++.|+++|++|||+. +.++.+...+...+... . ..+..+.+..++.|++.|
T Consensus 90 ~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~-------l~~~~~~~~iG~ii~~~-a----~~~~~l~~GR~l~G~g~G 157 (513)
T KOG0254|consen 90 RQGLLTSILNLGALVGSLLAGRLGDRIGRKKT-------LLLAVVLFLIGAIIIAL-A----PSWYQLIVGRILTGLGVG 157 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH-------HHHHHHHHHHHHHHHHH-h----hhHHHHHHHHHHhccchh
Confidence 45899999999999999999999999999976 33333333222222221 1 135668888899999888
Q ss_pred hcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHH
Q 017535 188 WNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGI 231 (370)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~ 231 (370)
.... +...++.|..|++.||...++.+....+|..++ .+.+.
T Consensus 158 ~~~~-~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~ 199 (513)
T KOG0254|consen 158 GASV-LAPVYISEIAPAHIRGTLVSLYQLFITIGILLG-YCINY 199 (513)
T ss_pred hhhh-cchhhHhhcCChhhhHHHHHHHHHHHHHHHHHH-HHHhh
Confidence 8887 889999999999999999999999888777776 33333
No 226
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.48 E-value=2.8e-06 Score=72.63 Aligned_cols=133 Identities=17% Similarity=0.161 Sum_probs=85.1
Q ss_pred HHHHH--HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCChh
Q 017535 95 AAMWL--ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTP 172 (370)
Q Consensus 95 ~~~~~--~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (370)
...++ ..+|+++.+.|.+++..++.+.+......+..+|.... . .........++++.. .++... .. .
T Consensus 283 t~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~-~----~a~l~~~l~~~vP~~--llls~~--~~-~ 352 (451)
T KOG2615|consen 283 TVLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGN-I----KAVLLFSLLLIVPAF--LLLSLA--RT-P 352 (451)
T ss_pred hHHHhhcCccCCChhhheeeeehhhHHHHHHHHhccccccccccc-h----hhHHHHHHHHHHHHH--HHHhcc--cc-c
Confidence 34444 56899999999988777776666555555554443211 1 001222223333322 222122 22 2
Q ss_pred HHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhhcC
Q 017535 173 VMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYG 238 (370)
Q Consensus 173 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~~g 238 (370)
..+.+...+..+......+ ....++....|+++||+++|+....+.++-++||.+.|.+....-+
T Consensus 353 ~~l~~~s~l~sf~~A~~vt-~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~Ws~~ 417 (451)
T KOG2615|consen 353 VVLYLGSTLKSFSTASVVT-CLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSWSQG 417 (451)
T ss_pred hhhhHHHHHHHHHHHHhhH-HHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEEecC
Confidence 2355555666666666566 6778888889999999999999999999999999999988776533
No 227
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.48 E-value=7.8e-05 Score=63.98 Aligned_cols=124 Identities=19% Similarity=0.195 Sum_probs=74.2
Q ss_pred HHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHH
Q 017535 99 LELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLV 178 (370)
Q Consensus 99 ~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (370)
++++|++..+++.++....+.+++...+.|.++||+|||+. +++.+++-. +.++.- ..+ ....+.+.
T Consensus 61 Y~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~-------cl~~cily~-~scl~k----~~~-~~~~L~~G 127 (354)
T PF05631_consen 61 YESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKA-------CLLFCILYS-LSCLTK----HSS-NYPVLLLG 127 (354)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHH-------HHHHHHHHH-HHHHHH----hcc-ccHHHHHH
Confidence 37899999999999999999999999999999999999976 344333322 222211 112 24456677
Q ss_pred HHHHHHHHHhcCCCCccc-hhcc----ccCCCchhHHHHHHHHHHH-HhhchhhHHHHHHHHhh
Q 017535 179 LVVTGLFISWNAPATNNP-IFAE----IVPEKSRTSVYAMDRSFES-ILSSFAPPVVGILAQHV 236 (370)
Q Consensus 179 ~~~~g~~~~~~~~~~~~~-~~~~----~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~g~l~~~~ 236 (370)
.++.|++...... ..=+ ++.| -+|++..+...+...+..+ +...++..+.-++.+..
T Consensus 128 RvlgGiaTSLLfS-~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~ 190 (354)
T PF05631_consen 128 RVLGGIATSLLFS-AFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWF 190 (354)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHh
Confidence 7777776655443 2222 2222 2344444555554443323 33344444444556655
No 228
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.47 E-value=2.6e-05 Score=66.66 Aligned_cols=122 Identities=16% Similarity=0.165 Sum_probs=81.7
Q ss_pred HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHH
Q 017535 100 ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVL 179 (370)
Q Consensus 100 ~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (370)
...|.+..+..++......+..+++...|.++|++|||+. ..+........ .+. ....+ +...+.+..
T Consensus 106 ~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~-------f~~T~l~t~v~---~~i-s~~sp-nf~~L~~f~ 173 (528)
T KOG0253|consen 106 EVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKG-------FNLTFLVTGVF---GVI-SGASP-NFASLCVFR 173 (528)
T ss_pred hhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchh-------hhhhHHHHHHH---HHh-hcCCC-CeehhhHHH
Confidence 5678888999999999999999999999999999999986 22222222211 111 11122 233356666
Q ss_pred HHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 180 VVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 180 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
.+.|++.|. .| ...++-.+..|..+|+.-+-+. +...+|..+...+.-.++...
T Consensus 174 ~l~~~g~gg-~p-v~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~ 227 (528)
T KOG0253|consen 174 ALWGFGVGG-LP-VDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNF 227 (528)
T ss_pred HHHhccCCC-cc-HhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhh
Confidence 777777776 66 6677778888888787766665 666677766665554444444
No 229
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.46 E-value=8e-05 Score=68.17 Aligned_cols=124 Identities=15% Similarity=0.004 Sum_probs=71.0
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHH---HhCCC-CCChhHHHHHHHHHHHH
Q 017535 109 TAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLL---LVLPD-DPSTPVMHGLVLVVTGL 184 (370)
Q Consensus 109 ~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~g~ 184 (370)
.+++.++..+..++.+++.+++-.|..+|+..........+++++......++. ..... ...+.+.+....++.++
T Consensus 310 ~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~ 389 (493)
T PRK15462 310 TAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGF 389 (493)
T ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHH
Confidence 445556666666666777777766664432211222223333333222221111 11111 11233445666677788
Q ss_pred HHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 185 FISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
+--...| ...+++.+..|++.+|..+|+.... ++++++.+.|++.+..
T Consensus 390 gEl~~sP-vgls~~~~laP~~~~g~~mg~w~l~---~~~~~~~~~g~~~~~~ 437 (493)
T PRK15462 390 AELFIDP-VAMSQITRIEIPGVTGVLTGIYMLL---SGAIANYLAGVIADQT 437 (493)
T ss_pred HHHHHCh-HHHHHHHHhChHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHh
Confidence 8778888 8899999999999999999998432 2345555566665554
No 230
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.45 E-value=1.6e-05 Score=74.40 Aligned_cols=121 Identities=19% Similarity=-0.041 Sum_probs=68.4
Q ss_pred HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCCh-hHHHHHH
Q 017535 100 ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPST-PVMHGLV 178 (370)
Q Consensus 100 ~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 178 (370)
..+|.+......+ .+.....+....+...|++|||.. ...+..+..+. .+.....+..... .......
T Consensus 346 ~~lg~~~~~~~~~---~~~~~~p~~~~~~~~~~~~gR~~~-------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 414 (521)
T KOG0255|consen 346 SGLGGNIYLNFTL---SGLVELPAYFRNGLLLPEFGRRPP-------LFLSLFLAGIG-LLLFGWLPDDLGGWLHWILPL 414 (521)
T ss_pred hhcCchHHHHHHH---HHHHHhhHHHHHHHHHHHhCcHHH-------HHHHHHHHHHH-HHHHHHhhccchhHHHHHHHH
Confidence 4455554333332 233556666677899999988865 23333332222 2222222222221 1111111
Q ss_pred HHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHH
Q 017535 179 LVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQ 234 (370)
Q Consensus 179 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~ 234 (370)
+...++..+ .. ..+.+..|.+|...|..+.+..+....++++++|.+.-....
T Consensus 415 ~~~~~~~~~--~~-~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~ 467 (521)
T KOG0255|consen 415 LGKFFIGSA--FN-LIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQ 467 (521)
T ss_pred HHHHHHHHH--HH-HHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 122222222 22 347788999999999999999999999999999988755444
No 231
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.41 E-value=3.4e-05 Score=65.82 Aligned_cols=128 Identities=16% Similarity=0.055 Sum_probs=92.5
Q ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHH
Q 017535 96 AMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMH 175 (370)
Q Consensus 96 ~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (370)
+.+-+++|+|...+|++.++..++..+.+++..++.+|+|.++. ...+.++.. . ....=.. . ....+
T Consensus 36 ~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~-------l~~~Llli~-~-G~~iR~~---~-~~~~L 102 (395)
T COG2807 36 DEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERS-------LFLALLLIA-A-GILIRSL---G-GLPLL 102 (395)
T ss_pred HHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHH-------HHHHHHHHH-H-HHHHHhc---c-cHHHH
Confidence 34447799999999999999999999999999999999998875 232222221 1 1111111 1 13334
Q ss_pred HHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhhcC
Q 017535 176 GLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYG 238 (370)
Q Consensus 176 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~~g 238 (370)
+....+.|.+.+.... .....+-+.+|++ .+..+|++....++++++++.+.-.+.++.+|
T Consensus 103 ~~gt~l~G~gIav~nV-LLPslIK~~Fpk~-~~~mtglYs~sl~~~aaLaa~lavpla~~~~g 163 (395)
T COG2807 103 FLGTLLAGAGIAVINV-LLPSLIKRDFPKR-VGLMTGLYSTSLGAGAALAAALAVPLAQHSGG 163 (395)
T ss_pred HHHHHHHHhhHHHHHH-hhhHHHHhhcccc-hhhHHhHHHHHHHHHHHHHhhhhhHHHHhhcc
Confidence 5555556666665555 6678888888765 89999999999999999999998888887644
No 232
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.40 E-value=1.4e-05 Score=73.39 Aligned_cols=143 Identities=13% Similarity=0.063 Sum_probs=87.5
Q ss_pred hhhhhhHHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh---hhCCCchhHHHHHHHHHHHHHHH
Q 017535 83 VTGSFPWSALSFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLS---ARFPNSGRIILAQISSLSAIPLA 158 (370)
Q Consensus 83 ~~~~~~~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~---~~~~~~~~~~~~~~~~~~~~~~~ 158 (370)
+.....+.....++.++ +++|++..+.+.+.+...+...+-.+ .|.++||++ +||. . .+++..++.. ..
T Consensus 36 ~~qGl~~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr----~-~l~~~~~l~~-~~ 108 (468)
T TIGR00788 36 FVKGIAGLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKR----W-YLVLSGLLGS-AI 108 (468)
T ss_pred HHhhHHHHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccch----H-HHHHHHHHHH-HH
Confidence 33344433335566777 67899999999988888888888544 999999996 2222 1 1222222221 11
Q ss_pred HHHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHH---HHHHHHHHHhhchhhHHHHHHHHh
Q 017535 159 ALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVY---AMDRSFESILSSFAPPVVGILAQH 235 (370)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~g~l~~~ 235 (370)
.... ....+.......+.+++.+++.+...+ ..-++..|..+ +.++... ++.....++|..+++.+.|.+.+.
T Consensus 109 ~~~~--l~~~~~~~~~~~~~~~l~~~~~a~~dv-~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~ 184 (468)
T TIGR00788 109 LYGL--LPGKVSSAKVAAAFIFLAALAKALYDV-LVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLDK 184 (468)
T ss_pred HHHh--cccccchHHHHHHHHHHHHHHHHHHHH-hHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1111 221222233333456677777776666 67888888877 4444433 333344568999999999999987
Q ss_pred h
Q 017535 236 V 236 (370)
Q Consensus 236 ~ 236 (370)
.
T Consensus 185 ~ 185 (468)
T TIGR00788 185 T 185 (468)
T ss_pred c
Confidence 6
No 233
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.37 E-value=7e-06 Score=71.43 Aligned_cols=132 Identities=20% Similarity=0.234 Sum_probs=88.9
Q ss_pred HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh-----hhCCCchhHHHHHHHHHHHHHHHHHHHHhCCC------C
Q 017535 100 ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLS-----ARFPNSGRIILAQISSLSAIPLAALLLLVLPD------D 168 (370)
Q Consensus 100 ~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~ 168 (370)
.+++++....+.+.++..+... .++..|+.+|+.+ ||.+ .++.................+.... .
T Consensus 8 vEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtP---yI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~ 83 (403)
T PF03209_consen 8 VELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTP---YIWGGTLLQAGGLAIAPFALLLLAESGQQSSG 83 (403)
T ss_pred HHhccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchh---hhHHHHHHHHHHHHHHHHHHHHHccccccccc
Confidence 6788888888888877766654 5899999999977 5544 2222222222211111111111222 1
Q ss_pred CCh--hHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 169 PST--PVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 169 ~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
+.. .....+.+.+.|++...... ...+++.|..|+++|+.+.++...+.-+|..++..+.|.+.+.+
T Consensus 84 ~~~~g~~~a~l~F~l~G~G~~~s~T-~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~ 152 (403)
T PF03209_consen 84 PFWLGLALAALAFLLYGLGVHASGT-SFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPF 152 (403)
T ss_pred ccHHHHHHHHHHHHHHHhhHhHhHH-HHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHcccc
Confidence 121 22344555667777776666 77899999999999999999999999999999999999998865
No 234
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.34 E-value=3.8e-09 Score=96.88 Aligned_cols=114 Identities=19% Similarity=0.119 Sum_probs=83.8
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHH
Q 017535 107 EKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFI 186 (370)
Q Consensus 107 ~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 186 (370)
...++..+...++..+|+++.|+++||+|||+. ..++..+..+...+ .. ......+.+.+.+..++.|++.
T Consensus 46 ~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~-------~~~~~~~~~i~~~~-~~-~~~~~~~~~~~~~~R~~~G~~~ 116 (451)
T PF00083_consen 46 LLSSLLTSSFFIGAIVGALIFGFLADRYGRKPA-------LIISALLMIIGSIL-IA-FAPSYNNFWMLLIGRFLIGFGI 116 (451)
T ss_pred HHHHHHHHHHHhhhccccccccccccccccccc-------cccccccccccccc-cc-cccccccccccccccccccccc
Confidence 456788888899999999999999999999987 33333332222211 11 1211113455777788899998
Q ss_pred HhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHH
Q 017535 187 SWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVG 230 (370)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g 230 (370)
|...+ ....++.|..|++.|+...++.+....+|..++..+.-
T Consensus 117 g~~~~-~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~ 159 (451)
T PF00083_consen 117 GGAYV-VSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGY 159 (451)
T ss_pred ccccc-cccccccccccccccccccccccccccccccccccccc
Confidence 88888 88999999999999999999999888888777765543
No 235
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.31 E-value=7.3e-06 Score=54.23 Aligned_cols=50 Identities=20% Similarity=0.248 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCC
Q 017535 90 SALSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFP 139 (370)
Q Consensus 90 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~ 139 (370)
....|+|.|+++.|+++.++|.+.++..+..+++.++.|+++||+++++.
T Consensus 18 ~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~ 67 (77)
T PF12832_consen 18 CLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKV 67 (77)
T ss_pred HHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHH
Confidence 34468899998899999999999999999999999999999999998875
No 236
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=98.21 E-value=4.9e-06 Score=74.55 Aligned_cols=149 Identities=15% Similarity=0.110 Sum_probs=97.4
Q ss_pred HHHHHHHHhhhhhhHHHH-HHHHHHHHH--hCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhh-hCCCchhHHHHHHH
Q 017535 75 FQIIVAQGVTGSFPWSAL-SFAAMWLEL--TGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSA-RFPNSGRIILAQIS 150 (370)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~-~~~~~~~~~~~~~~ 150 (370)
.++.....++....+++. .-.-.|++. .+-+.+..|++.+...++.++++++.|+...|.++ |++ ++.+
T Consensus 36 i~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~P-------li~s 108 (488)
T KOG2325|consen 36 IYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKP-------LIVS 108 (488)
T ss_pred HHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccC-------HHHH
Confidence 344444444444433332 233456655 78888899999999999999999999999999875 444 3444
Q ss_pred HHHHHHHHHHHHHhCCCCCC-hhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHH
Q 017535 151 SLSAIPLAALLLLVLPDDPS-TPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVV 229 (370)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 229 (370)
.++++. ..++++.....+. ..+++++..++.|++.+... ..-+++++..-+++|.++.+..+....+|..+||.+.
T Consensus 109 ~ii~~~-g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~a--~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q 185 (488)
T KOG2325|consen 109 FLIAII-GNLLYLALAYVPNGVKYLMLVARILTGVGVGNFA--VLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQ 185 (488)
T ss_pred HHHHHH-HHHHHHHHHhcccchHHHHHHHHHHcCcCcccHH--HHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHH
Confidence 444433 2222211222222 46678888888888766443 4578888877777788898888887788888887765
Q ss_pred HHHH
Q 017535 230 GILA 233 (370)
Q Consensus 230 g~l~ 233 (370)
..+.
T Consensus 186 ~~f~ 189 (488)
T KOG2325|consen 186 LAFT 189 (488)
T ss_pred HHHh
Confidence 4433
No 237
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.17 E-value=5.7e-05 Score=68.45 Aligned_cols=220 Identities=14% Similarity=0.132 Sum_probs=127.8
Q ss_pred ccccccccCchhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCC-CCcc-ccCcccchhhhhhHHHHhhhccchHHHHHHH
Q 017535 3 PMTFMGIPGWRISFHIVGLISVVVGTLVRLFANDPHFPDGGTA-NSDQ-VSSKSFRSDVKVLIQEAKSVIKIPSFQIIVA 80 (370)
Q Consensus 3 g~~~~~~~gWr~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (370)
++++....|.-.+|.+..+..++..+...+++||+...+.... ...+ ...........+..+..+..-.+|..+.++.
T Consensus 168 ~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~l~l 247 (463)
T KOG2816|consen 168 GGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSDATLRELTPGSLDSSHVADAFQSLTKVGPDRLLLLLLL 247 (463)
T ss_pred HHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCccccccccccccCCCcccchhhhhhhhhhcccCCCccchHHHH
Confidence 4455556777888888888888888888888888544333221 0000 0001111111223333333222344333332
Q ss_pred HH-hhhhhhHHHHH-HHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHH-HHHHHHhhhCCCchhHHHHHHHHHHHHH
Q 017535 81 QG-VTGSFPWSALS-FAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGG-RMGDFLSARFPNSGRIILAQISSLSAIP 156 (370)
Q Consensus 81 ~~-~~~~~~~~~~~-~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g-~l~dr~~~~~~~~~~~~~~~~~~~~~~~ 156 (370)
.. .......+-.. ..+.|+ ..++++..+.+.+.+...+...++.++.. .+...++.++. ..++...-
T Consensus 248 ~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~-------i~lGl~~~-- 318 (463)
T KOG2816|consen 248 VAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRL-------ISLGLLSE-- 318 (463)
T ss_pred HHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhH-------hhHHHHHH--
Confidence 22 22222221111 234556 67999999999999988888888888777 66666777653 23332222
Q ss_pred HHHHHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 157 LAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
.....+..+.+..+ .++......+ ......| ...+.+...++++.+|.+.++...+..+.+.++|.+.+.+...+
T Consensus 319 ~~~~~~~af~~~~w---~~~~~~v~~~-~~~~~~p-a~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~~t 393 (463)
T KOG2816|consen 319 FLQLLLFAFATETW---MMFAAGVVVA-LAGIVFP-AIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFALT 393 (463)
T ss_pred HHHHHHHHHhccch---hhhHHHHHHH-hhcchhH-HHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHHHH
Confidence 22222222333332 2222222222 2333445 66788888899999999999999999999999999999887766
No 238
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.15 E-value=9.4e-06 Score=72.54 Aligned_cols=157 Identities=10% Similarity=0.070 Sum_probs=89.5
Q ss_pred hhhHHHHhhhccchHHHHHHHHHhhhhhhHHHH-HHHHHHHHHhCCC-HHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhh
Q 017535 60 KVLIQEAKSVIKIPSFQIIVAQGVTGSFPWSAL-SFAAMWLELTGFS-HEKTAFLMALFVIASSLGGLFGGRMGDFLSAR 137 (370)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~s-~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~ 137 (370)
+..+.+++...+|+.++...+...+....|... +|.....+...-+ +..-|..-++..+.+.+..+..|++-.++.+.
T Consensus 249 ~~l~~~~~~~y~n~~vl~WSlWwa~a~~g~~qv~~Y~Q~LW~~v~~~~~~yNG~veA~~tllga~~a~~ag~~~~~w~~~ 328 (511)
T TIGR00806 249 VRMLSELVTIYRNPQLLLWSLWWVFNSAGYYLITYYVHTLWGTLDESLNKYNGAVDAASTLLGAITSFIAGFVNIRWARW 328 (511)
T ss_pred HHHHHHHHHHhcCcchhhhhHHHHHHhhHHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHHhhcCCchhh
Confidence 456778888899998666555555555554433 5555555443222 22345555566677777888888875544222
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHH
Q 017535 138 FPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSF 217 (370)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 217 (370)
.. +.++.+..+-..++++. . ...+.|+.++..++++....+..+ +...-++.....+.-|...|+++++
T Consensus 329 ~~-------l~l~v~s~~~~gll~~m--~-~t~~Iw~~Y~~yvlf~~~y~flit-ia~~~iA~~L~~~~~aLvFGiNtfv 397 (511)
T TIGR00806 329 SK-------LLIAVVSAIQAGLVFWM--S-QSHDIWVLYVTYVLFRGIYQFLVP-IATFQIASSLSKELCALVFGINTFV 397 (511)
T ss_pred HH-------HHHHHHHHHHHHHhhhh--h-cccchHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhcccceEEEEecHHHH
Confidence 11 22222222111122221 2 223356666666666666665555 5566666667777779999999888
Q ss_pred HHHhhchhhH
Q 017535 218 ESILSSFAPP 227 (370)
Q Consensus 218 ~~~~~~~~~~ 227 (370)
.-+-..+-..
T Consensus 398 Al~LQtilT~ 407 (511)
T TIGR00806 398 ATALKTIITA 407 (511)
T ss_pred HHHHHHheEE
Confidence 7766655443
No 239
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.02 E-value=0.00058 Score=62.62 Aligned_cols=117 Identities=15% Similarity=0.147 Sum_probs=72.3
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHHHh
Q 017535 109 TAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISW 188 (370)
Q Consensus 109 ~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 188 (370)
.++..++..+...+..++.|-++|+-++||. .+.+...++. +....++... +..++...++.++...+...
T Consensus 72 ~~~~~sis~l~~all~P~lGa~aD~~~~Rk~------~l~~~~~~~~-~~~~~l~~v~--~~~~~~~~~l~iia~v~~~~ 142 (477)
T PF11700_consen 72 WLYANSISGLLQALLAPFLGAIADYGGRRKR------FLLIFTLLGV-LATALLWFVS--PGQWWLALVLFIIANVGYEA 142 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcccccchH------HHHHHHHHHH-HHHHHHHHhC--cchHHHHHHHHHHHHHHHHH
Confidence 3556667778888888999999999888876 1222222222 2222222222 22233333333333334444
Q ss_pred cCCCCccchhccccCCCch--------------------------hHHHHHHHHHHHHhhchhhHHHHHHHHh
Q 017535 189 NAPATNNPIFAEIVPEKSR--------------------------TSVYAMDRSFESILSSFAPPVVGILAQH 235 (370)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~--------------------------g~~~~~~~~~~~~~~~~~~~~~g~l~~~ 235 (370)
... ..++++.++.+++.+ ++.++.-...+++|+.+.-.+.-.+...
T Consensus 143 ~~v-fyna~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~ 214 (477)
T PF11700_consen 143 SNV-FYNAYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVIS 214 (477)
T ss_pred HHH-HHHHHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 444 568889999988888 9999999999999998776655444443
No 240
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.96 E-value=0.0026 Score=57.30 Aligned_cols=164 Identities=13% Similarity=0.088 Sum_probs=90.6
Q ss_pred hhhHHHHhhhccchHHHHHHHHHhhhhhhHHHH-HHHHHHH--H-HhCCCHHH-HHHHHHHHHHHHHHhHHHHHHHHHHH
Q 017535 60 KVLIQEAKSVIKIPSFQIIVAQGVTGSFPWSAL-SFAAMWL--E-LTGFSHEK-TAFLMALFVIASSLGGLFGGRMGDFL 134 (370)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~-~~g~s~~~-~~~~~~~~~~~~~ig~~~~g~l~dr~ 134 (370)
.+..+...++++++++..+...+........+. ...|..+ . ..+.+... .++.....+++.+++.+..+.+.+|.
T Consensus 227 ~~~l~~~~~l~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~ri 306 (461)
T KOG3098|consen 227 SELLKLTFKLLKTPKMLLLFPFFFYTGLETSFWISIYPTCISFTRKLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRI 306 (461)
T ss_pred HHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhh
Confidence 455556667788888666666655555443333 3344433 2 44444433 33444445777777777788887776
Q ss_pred hhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCC-------------hhHHHHHHHHHHHHHHHhcCCCCccchhccc
Q 017535 135 SARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPS-------------TPVMHGLVLVVTGLFISWNAPATNNPIFAEI 201 (370)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 201 (370)
.+..... ...++..+......+..+..+...+ ......++.++.|++-..... ..+.++...
T Consensus 307 r~fg~~~----~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t-~~~~ii~~~ 381 (461)
T KOG3098|consen 307 RGFGRKP----TVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNT-QRYVIIALL 381 (461)
T ss_pred hhcccCc----chhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHH-HHHHHHHHH
Confidence 4443211 1222222222222233333332210 123455666777777665555 567777777
Q ss_pred cCCCchhHHHHHHHHHHHHhhchhhHHH
Q 017535 202 VPEKSRTSVYAMDRSFESILSSFAPPVV 229 (370)
Q Consensus 202 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 229 (370)
. ++.|..+.++..+-..++..++-...
T Consensus 382 ~-~~~~~~~fsi~kfyq~~~s~v~~f~~ 408 (461)
T KOG3098|consen 382 Y-PDDRAQAFSLFKFYQSVASCVAFFFS 408 (461)
T ss_pred h-cCchHHHHHHHHHHHHHHHHHHhhhh
Confidence 7 56688888888888777776654433
No 241
>PRK03612 spermidine synthase; Provisional
Probab=97.82 E-value=0.0028 Score=58.83 Aligned_cols=129 Identities=15% Similarity=0.139 Sum_probs=72.2
Q ss_pred HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHH
Q 017535 100 ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVL 179 (370)
Q Consensus 100 ~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (370)
..+|-+....+.+.+.+..+..+|+.+++++.++..++.. ..-+.++.+..+ ...+...................
T Consensus 43 ~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~----~~e~~i~l~~~~-~~~ll~~~~~~~~~~~~~~~~~~ 117 (521)
T PRK03612 43 YLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFV----AVELLLALLGGL-SALILYAAFAFQGLSRLLLYVLV 117 (521)
T ss_pred HHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHH----HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 5678888888999999999999999888877643322211 010111111111 11111111111111112233444
Q ss_pred HHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHh
Q 017535 180 VVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQH 235 (370)
Q Consensus 180 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~ 235 (370)
+..++..|...| ....+..+ ...+..|...|-......+|+++|+.+.+++.-.
T Consensus 118 ~~~~~l~G~~~P-l~~~~~~~-~~~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp 171 (521)
T PRK03612 118 LLIGLLIGMEIP-LLMRILQR-IRDQHLGHNVATVLAADYLGALVGGLAFPFLLLP 171 (521)
T ss_pred HHHHHHHHHHHH-HHHHHHHh-ccccchhhhhhhhHhHHhHHHHHHHHHHHHHHHH
Confidence 556777777766 43333333 2222356778888888999999999998887653
No 242
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.80 E-value=0.00059 Score=60.15 Aligned_cols=131 Identities=14% Similarity=0.062 Sum_probs=80.9
Q ss_pred HHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHH-hCCCCCChhH
Q 017535 96 AMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLL-VLPDDPSTPV 173 (370)
Q Consensus 96 ~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 173 (370)
..+. ..+| +...+-+...++.+.++...+.+-|+.||+|-|.. ..++....++...+=.. ..+.-+...+
T Consensus 68 ~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a-------~llgt~ln~iGa~Ir~iss~p~v~~~f~ 139 (480)
T KOG2563|consen 68 NNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTA-------LLLGTVLNGIGAWIRLISSLPFVPPLFR 139 (480)
T ss_pred HHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHH-------HHHHHHHHHHHHHHhhhccCccccccch
Confidence 3455 5567 66667777778899999999999999999999865 33333333322222121 1221112222
Q ss_pred --HHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHh
Q 017535 174 --MHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQH 235 (370)
Q Consensus 174 --~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~ 235 (370)
+........+....+... ...-.....+|+++|+++..+..+...+|.+++..+...+..+
T Consensus 140 ~~l~~~Gq~iaa~Aq~Fim~-lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~ 202 (480)
T KOG2563|consen 140 RPLTHTGQSIAAAAQPFILG-LPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPS 202 (480)
T ss_pred hhhhHHhHHHHHHhhhHhhc-cccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCC
Confidence 233333344443333332 2234455678999999999999998889988887776666554
No 243
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.69 E-value=0.00099 Score=60.61 Aligned_cols=136 Identities=19% Similarity=0.212 Sum_probs=83.8
Q ss_pred HHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh---hhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCChh
Q 017535 97 MWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLS---ARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTP 172 (370)
Q Consensus 97 ~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (370)
.|+ +++|+++.+...+.....+.-.+ .++.|.++|-+- .||.. -++++.+++.. ....+...+......
T Consensus 14 ~~l~~~l~ls~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~-----Y~~i~~~~~~~-~~~~~~~~~~~~~s~ 86 (433)
T PF03092_consen 14 PFLKDDLGLSPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKP-----YMIIGWLLGAV-SALVLALLPASESSA 86 (433)
T ss_pred HHHHHHcCCCHHHHHHHHHHHhCchHH-hhhHHhhcccccccCCcchH-----HHHHHHHHHHH-HHHHHHhcccccchh
Confidence 444 78999999998887777665554 678899999863 23221 12333333322 222222233322223
Q ss_pred HHHHHHHHHHHHHHHhcCCCCccchhccccC--CCchhHHHHHHHHHHHHhhchhhHHHHHHHHhhcCCCC
Q 017535 173 VMHGLVLVVTGLFISWNAPATNNPIFAEIVP--EKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYGFKP 241 (370)
Q Consensus 173 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~~g~~~ 241 (370)
....+.+++..++...... ..-++..|... ++.+|...+....+..+|+.++..+.|.+.+.. +++.
T Consensus 87 ~~~~~~l~la~~g~a~~DV-~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~-~~~~ 155 (433)
T PF03092_consen 87 AIAVVLLFLASFGYAFADV-AADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSF-GPQG 155 (433)
T ss_pred hhHHHHHHHHHHHHHHHHH-hhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcC-CCeE
Confidence 3344444555555555444 55666666542 233778888888899999999999999998876 5443
No 244
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=97.69 E-value=0.002 Score=52.81 Aligned_cols=25 Identities=20% Similarity=0.360 Sum_probs=19.4
Q ss_pred CchhHHHHHHHHHHHHHHHHHHhcC
Q 017535 11 GWRISFHIVGLISVVVGTLVRLFAN 35 (370)
Q Consensus 11 gWr~~f~i~~~~~~i~~~~~~~~~~ 35 (370)
.|++++.+.+++.++..++..++=+
T Consensus 39 ~W~~I~si~~lL~~IpLIly~ifGk 63 (267)
T PF07672_consen 39 NWQWILSIFILLIFIPLILYIIFGK 63 (267)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 5999999999888777766666633
No 245
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=97.67 E-value=0.015 Score=52.31 Aligned_cols=121 Identities=14% Similarity=0.012 Sum_probs=74.4
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHH---hCC--CCCChhHHHHHHHHHHH
Q 017535 109 TAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLL---VLP--DDPSTPVMHGLVLVVTG 183 (370)
Q Consensus 109 ~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~g 183 (370)
.++..+...+.-++..++..++..|.++++..........++.+++....+++.. ... ....+.+.+....++.+
T Consensus 326 ~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s 405 (498)
T COG3104 326 PAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQS 405 (498)
T ss_pred HHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHH
Confidence 4455566666777777788888888666543222222333333322221111111 112 22234555667778888
Q ss_pred HHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHH
Q 017535 184 LFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVG 230 (370)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g 230 (370)
++--...| +..+++....|+...+..+|+.......+..++..+.+
T Consensus 406 ~gEL~iSp-vGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~ 451 (498)
T COG3104 406 FGELFISP-VGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAG 451 (498)
T ss_pred HHHHHhCH-HHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecc
Confidence 88877778 88899999999988888888887777766666655554
No 246
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.56 E-value=0.004 Score=55.08 Aligned_cols=60 Identities=15% Similarity=-0.031 Sum_probs=49.4
Q ss_pred hHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHH
Q 017535 172 PVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGIL 232 (370)
Q Consensus 172 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l 232 (370)
.+++.+.++..|+..|..+. ..+..+.+..++++|-.++|.......+|..++..++-++
T Consensus 335 i~ivf~lif~eGLlGGa~YV-NtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 335 IWIVFVLIFYEGLLGGASYV-NTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHHHHHHHHHhhhHHHH-HHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 56677788888998888888 7788888889999999999999999888888877665444
No 247
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=97.55 E-value=0.0026 Score=56.29 Aligned_cols=155 Identities=9% Similarity=0.062 Sum_probs=88.9
Q ss_pred hhhHHHHhhhccchHHHHHHHHHhhhhhhHHHH-HHHHHHHHHh---CCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Q 017535 60 KVLIQEAKSVIKIPSFQIIVAQGVTGSFPWSAL-SFAAMWLELT---GFSHEKTAFLMALFVIASSLGGLFGGRMGDFLS 135 (370)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~ 135 (370)
+..++++++..+||.++...+...+...+|... +|.....++. +-....-|.+-+...+.+.++.+..|++..++.
T Consensus 234 ~~l~~~~~~~y~~~~ll~WSlWWa~atcgy~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~ 313 (412)
T PF01770_consen 234 RLLWKDFKSCYSNPRLLLWSLWWAFATCGYYQVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWD 313 (412)
T ss_pred HHHHHHHHHHhcCchHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchH
Confidence 456778888999999777766666666665544 5655555444 333444566666777778888888888854444
Q ss_pred hhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHH
Q 017535 136 ARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDR 215 (370)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 215 (370)
+... ..++....+...++.+.. ...+.+...+..++.+.......+ +...-++.....+.-|...|+++
T Consensus 314 ~~~~-------l~l~~~S~l~a~~L~lm~---~t~~Iwv~Y~~yIif~~~y~fliT-iA~~qIA~~l~~e~yaLVFGiNt 382 (412)
T PF01770_consen 314 RWGE-------LALGVFSLLQAGLLFLMS---FTGNIWVCYAGYIIFRSLYMFLIT-IASFQIAKNLSEERYALVFGINT 382 (412)
T ss_pred HHHH-------HHHHHHHHHHHHHHHHHH---HhhHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhccccceeeeeeeHH
Confidence 4322 122212111111222211 122344555555555544444444 44455555566777888899888
Q ss_pred HHHHHhhchh
Q 017535 216 SFESILSSFA 225 (370)
Q Consensus 216 ~~~~~~~~~~ 225 (370)
++..+-..+-
T Consensus 383 f~Al~LQtil 392 (412)
T PF01770_consen 383 FVALVLQTIL 392 (412)
T ss_pred HHHHHHHHhe
Confidence 8766655443
No 248
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=97.54 E-value=1.1e-05 Score=74.91 Aligned_cols=135 Identities=11% Similarity=-0.040 Sum_probs=2.4
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHH---hCCC---
Q 017535 94 FAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLL---VLPD--- 167 (370)
Q Consensus 94 ~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--- 167 (370)
.++++-+.++++..++|++.+.+-++.++..++..++.+|.+|-+. +.++.++..+..++..+ ....
T Consensus 25 ~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprw-------ig~g~~~~~~g~~l~~lPhf~~~~y~~ 97 (539)
T PF03137_consen 25 SLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRW-------IGIGALLMGLGSLLFALPHFLSGPYSY 97 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcce-------eeecHHHHHHHHHHHhccHhhcCCCcc
Confidence 3444458899999999999999999999999999999887544433 22222222111111100 0000
Q ss_pred ------------------------------------C---CChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchh
Q 017535 168 ------------------------------------D---PSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRT 208 (370)
Q Consensus 168 ------------------------------------~---~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g 208 (370)
. ...+.++.+..++.|++....++ ...+++=|.++++..+
T Consensus 98 ~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~t-LG~tYiDDnv~~~~sp 176 (539)
T PF03137_consen 98 EEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYT-LGITYIDDNVSKKNSP 176 (539)
T ss_dssp ------------------------------------------------------SSS-----------------------
T ss_pred ccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCcc-ceeeeeccccccccCc
Confidence 0 00123455566777888777787 8899999999999999
Q ss_pred HHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 209 SVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
.-.|+...+..+|-++|-.+++.+...+
T Consensus 177 lYiGi~~~~~~lGPa~Gf~lg~~~L~~y 204 (539)
T PF03137_consen 177 LYIGILYAMSILGPALGFLLGSFCLRIY 204 (539)
T ss_dssp ----------------------------
T ss_pred cchhhhhHHhhccHHHHHHHHHHHHhce
Confidence 9999999999999999888888877654
No 249
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=97.45 E-value=0.0031 Score=55.41 Aligned_cols=126 Identities=11% Similarity=0.125 Sum_probs=81.4
Q ss_pred HHHHHHH-HHhCC---C----HHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHh
Q 017535 93 SFAAMWL-ELTGF---S----HEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLV 164 (370)
Q Consensus 93 ~~~~~~~-~~~g~---s----~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (370)
+++|.|+ +..+. + ....+...++..+...+-+++.|.++|+.|+||.. ..+...+.....+.+.+
T Consensus 36 ~ifply~~~~~~~~g~~~~~~~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~------~~~f~~i~i~~~~~L~~- 108 (438)
T COG2270 36 FIFPLYFTSVAGAGGVDPASSTAYWGYASAIAGLLIALLAPILGTIADYPGPRKKF------FGFFTAIGIISTFLLWF- 108 (438)
T ss_pred ehhHHHHHHHHhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchH------HHHHHHHHHHHHHHHHH-
Confidence 4568887 44332 3 24455666667777777888999999999999872 22222233322222222
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhH
Q 017535 165 LPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPP 227 (370)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 227 (370)
.+.. ..++...+++.+...+...... ...+++.+..+++..++.+++....+++|+.+.-.
T Consensus 109 i~~~-s~~~~~l~~~il~~i~~~~s~V-fyds~L~~~~~k~~~~riS~lg~~~gylgs~i~li 169 (438)
T COG2270 109 IPPG-SYLLLLLLFLILASIGFEFSNV-FYDSMLPRLTTKDNMGRISGLGWALGYLGSVILLI 169 (438)
T ss_pred hCCC-chHHHHHHHHHHHHHhcchhhe-ehhhHhhhhcCccccCcccccccccccccchHHHH
Confidence 3332 3455555555666665555555 67899999999998999999988888988866543
No 250
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=97.42 E-value=0.055 Score=48.91 Aligned_cols=172 Identities=15% Similarity=0.113 Sum_probs=91.5
Q ss_pred hhhHHHHhhhccchHHHHHHHHHhhhhhhHHHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhC
Q 017535 60 KVLIQEAKSVIKIPSFQIIVAQGVTGSFPWSAL-SFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARF 138 (370)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~ 138 (370)
++..+.+++++|.|....+++..+..=+.+... .-...=+-+.|++..+.+++..+..-. .++.|+++.|+.+-+
T Consensus 265 ~~~Y~~l~~ilkLp~V~~li~ilL~~KigF~a~da~T~LKLlEkG~~KE~LAl~~li~~P~----qii~~~~~~Kws~g~ 340 (544)
T PF13000_consen 265 KDVYKSLWKILKLPNVQTLIIILLTAKIGFQANDAVTSLKLLEKGLSKEDLALLVLIDFPF----QIILPYYIGKWSAGS 340 (544)
T ss_pred HHHHHHHHHHHcCchHHHHHHHHHHHHhccccchhhhHHHHHHcCCCHHHhHHHHHHhhhH----HHHHHHHhhhhhcCC
Confidence 445566677888888666555544444443333 222333468999999888765444333 444455555543322
Q ss_pred CCc-------------h-----------hHHHHHHHHHHHHHHH---HHHHHhCCCCC-ChhHHHHHHH---HHHHHHHH
Q 017535 139 PNS-------------G-----------RIILAQISSLSAIPLA---ALLLLVLPDDP-STPVMHGLVL---VVTGLFIS 187 (370)
Q Consensus 139 ~~~-------------~-----------~~~~~~~~~~~~~~~~---~~~~~~~~~~~-~~~~~~~~~~---~~~g~~~~ 187 (370)
... . .+.....+...-+... ......+|... .....+.+++ .+..+...
T Consensus 341 ~P~~~~~~~l~~~~~~~~~~~~l~g~~g~L~~Wl~af~gRL~~a~l~~~iV~~fP~~g~v~~~Yf~lvI~~~~l~sf~st 420 (544)
T PF13000_consen 341 PPLDVDNKALPNFSRANKIIRLLVGDAGALRPWLWAFWGRLVAALLAQLIVYFFPSDGPVPTYYFLLVIIQHVLSSFMST 420 (544)
T ss_pred CccccccccccccccccchhhhhhccchhhHHHHHHHHHHHHHHHHHHheEEeCCCCCCcchHHHHHHHHHHHHHHHHHH
Confidence 210 0 0122222222111111 11112234222 1122222221 22222222
Q ss_pred hcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 188 WNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
..+. ...+.-+.+.+|..-|+-+.+.|++.|+|+-.-..+.=++.|..
T Consensus 421 vmFV-ai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~f 468 (544)
T PF13000_consen 421 VMFV-AIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDYF 468 (544)
T ss_pred HHHH-HHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhhc
Confidence 2233 34666677889999999999999999999988888888888887
No 251
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.42 E-value=0.00095 Score=60.69 Aligned_cols=103 Identities=16% Similarity=0.104 Sum_probs=69.4
Q ss_pred HHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHH-HHHHHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCcc
Q 017535 117 VIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIP-LAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNN 195 (370)
Q Consensus 117 ~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 195 (370)
++..++.+++.|.++||+|||.. ..+..+..++ ..+..+.. +|.+. ..-+.| +.+.... ...
T Consensus 72 ~~~~~i~s~~iG~lSD~~grk~~-------L~~~~~~~~l~~~~~~~~~-------~~~~~-~~~l~g-~~~~~~s-~~~ 134 (463)
T KOG2816|consen 72 GLLTLISSPLIGALSDRYGRKVV-------LLLPLFGTILPALCLLFQG-------YWFFL-LLGLSG-GFSAIFS-VGF 134 (463)
T ss_pred HHHHHHHHhhhHHhhhhhhhhhh-------HHHHHHHHHHhHHHHHHHH-------HHHhh-hccccc-chhhhhh-hhh
Confidence 67888899999999999999976 2222222211 11111111 22222 111122 2222233 568
Q ss_pred chhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 196 PIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 196 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
+++++....+.|....|+.+.....+..++|.+.+.+....
T Consensus 135 a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~ 175 (463)
T KOG2816|consen 135 AYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFL 175 (463)
T ss_pred hheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhc
Confidence 88999999999999999999999999999999999999886
No 252
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.31 E-value=0.041 Score=49.67 Aligned_cols=143 Identities=17% Similarity=0.113 Sum_probs=69.9
Q ss_pred HHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCC---
Q 017535 93 SFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDD--- 168 (370)
Q Consensus 93 ~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 168 (370)
.-.|.++ ..+.-+....+.+...-.+..++.....|.+.||..|.+..+..+..--+...+++.+....+ .....
T Consensus 23 Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~s~~~~~~l~-~~~~~~~~ 101 (432)
T PF06963_consen 23 FAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAASCALFLLLL-SYPSSSSQ 101 (432)
T ss_pred HHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHHHHHHHHHHH-hCCccccc
Confidence 3456777 555445555565555667788888888899999987766532222221222222222222222 12221
Q ss_pred -CChhHHHHHHHHHHHHHHHhcCCCCccc----hhcccc--CCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 169 -PSTPVMHGLVLVVTGLFISWNAPATNNP----IFAEIV--PEKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 169 -~~~~~~~~~~~~~~g~~~~~~~~~~~~~----~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
..............+...-....+...+ .+..+. ++......++.+.-+-.+.-.++|.+.|.+.+..
T Consensus 102 ~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~~ 176 (432)
T PF06963_consen 102 SSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKLLAPLFVGLLMTFA 176 (432)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 1111122222222222111111101111 111122 3444556666666666778899999999998865
No 253
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=97.24 E-value=0.01 Score=50.82 Aligned_cols=131 Identities=21% Similarity=0.282 Sum_probs=83.6
Q ss_pred HHHHHHHHhCCCH--HHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCCh
Q 017535 94 FAAMWLELTGFSH--EKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPST 171 (370)
Q Consensus 94 ~~~~~~~~~g~s~--~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (370)
..+.+....+.+. ...++......+...++.++.|++.||.|+|+. ...+..... ........... ..
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~-------~~~~~~~~~-~~~~~~~~~~~--~~ 93 (338)
T COG0477 24 ALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKV-------LIIGLLLFL-LGTLLLALAPN--VG 93 (338)
T ss_pred HHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHH-------HHHHHHHHH-HHHHHHHhCcc--ch
Confidence 3455555555555 478888888888888888999999999987733 222222111 11111111222 22
Q ss_pred hHHHHHHHHHHHHHHHhcCCCCccchhccccCC-CchhHHHHHHHH-HHHHhhchhhHHHHHHHHh
Q 017535 172 PVMHGLVLVVTGLFISWNAPATNNPIFAEIVPE-KSRTSVYAMDRS-FESILSSFAPPVVGILAQH 235 (370)
Q Consensus 172 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~-~~~~~~~~~~~~~g~l~~~ 235 (370)
.+.+.+..+..|++.+...+ ...+++.+..|+ +.++...+.... ...++..+++.+.+.+...
T Consensus 94 ~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (338)
T COG0477 94 LALLLILRLLQGLGGGGLLP-VASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA 158 (338)
T ss_pred HHHHHHHHHHHHhhhHHHHH-HHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444455556777666666 678888888887 568888888887 5667778888776666654
No 254
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=97.24 E-value=0.00018 Score=59.33 Aligned_cols=134 Identities=15% Similarity=0.040 Sum_probs=92.3
Q ss_pred HHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHH-hhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCChh
Q 017535 95 AAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFL-SARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTP 172 (370)
Q Consensus 95 ~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (370)
+..++ .+.+.+..+..++++++....++-.+++|++.||. |.|.. ....+++. . +.-+.+. ........
T Consensus 66 lq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~g---tii~~~fv---~--~GqliFa-~Ggi~~aF 136 (459)
T KOG4686|consen 66 LQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLG---TIILCIFV---F--LGQLIFA-AGGISHAF 136 (459)
T ss_pred hhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHH---HHHHHHHH---H--HHHHHHH-hchHHHHH
Confidence 34444 45667777788899999999999999999999983 44432 11111111 1 1111111 11122346
Q ss_pred HHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhhcC
Q 017535 173 VMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYG 238 (370)
Q Consensus 173 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~~g 238 (370)
|.+....|++|++.-.... ..+.++...+..+..+.++|+...+..+|+.+--.+.+++.|..+.
T Consensus 137 w~M~~GRF~FGIGgESlAV-aQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~~~ 201 (459)
T KOG4686|consen 137 WTMLAGRFLFGIGGESLAV-AQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTMGR 201 (459)
T ss_pred HHHHhhheeeccCchhhhh-hhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHHHH
Confidence 7778888888887554445 5677888888888999999999999999998888888999888743
No 255
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=97.17 E-value=0.045 Score=50.05 Aligned_cols=43 Identities=9% Similarity=0.008 Sum_probs=38.5
Q ss_pred CccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHh
Q 017535 193 TNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQH 235 (370)
Q Consensus 193 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~ 235 (370)
..+..+.|.+..++..+-+++.....++|..+++.+..++.+.
T Consensus 149 lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~~ 191 (472)
T TIGR00769 149 LFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSKL 191 (472)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4588889999999999999999999999999999988887754
No 256
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=97.17 E-value=0.0014 Score=59.11 Aligned_cols=47 Identities=11% Similarity=0.147 Sum_probs=39.3
Q ss_pred CccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhhcCCC
Q 017535 193 TNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYGFK 240 (370)
Q Consensus 193 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~~g~~ 240 (370)
...+..+++..|+.+++..+++......+..++|.+...+.... |+.
T Consensus 408 ~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~-g~~ 454 (488)
T KOG2325|consen 408 ALDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLS-GPR 454 (488)
T ss_pred hHHHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHhc-Ccc
Confidence 34667778889999999999999999999999999888887776 544
No 257
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=97.16 E-value=0.02 Score=49.68 Aligned_cols=177 Identities=14% Similarity=0.111 Sum_probs=91.4
Q ss_pred hhhHHHHhhhccchHHHHHHHHHhhhhhhHHHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhC
Q 017535 60 KVLIQEAKSVIKIPSFQIIVAQGVTGSFPWSAL-SFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARF 138 (370)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~ 138 (370)
++..+-++.+++-|....+...-+..=..+... ...+.-+-++|++..+.+++..+..-..++.....|.++. ++|+
T Consensus 252 ~~~yk~l~~vLklk~v~~la~i~lt~K~gf~a~da~t~LkLle~Gv~ke~Lal~~v~~~plqI~l~~~~gk~ta--~~~p 329 (510)
T KOG3574|consen 252 HESYKLLRDVLKLKSVRWLAGILLTGKLGFQAADALTSLKLLEHGVPKEELALIAVPLVPLQIALPLYIGKWTA--GPRP 329 (510)
T ss_pred HHHHHHHHHHHcCccHHHHHHHHHHHHHHhhhhhhccchHHHHcCCChhHheeeeeehhhHHHhhhhhheeecC--CCCc
Confidence 555666777888777554444444333333333 3445556789999999888664444444444444443322 1111
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHhCCCC-----C--ChhHHHHHH-HHHHHHHHHhcCCCCccchhccccCCCchhHH
Q 017535 139 PNSGRIILAQISSLSAIPLAALLLLVLPDD-----P--STPVMHGLV-LVVTGLFISWNAPATNNPIFAEIVPEKSRTSV 210 (370)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~--~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~ 210 (370)
... ..+....-.+.......+.++ .+.. . ....++.+. ..+.+......+. ...+..+.+.||..-|+-
T Consensus 330 l~~-~lka~~~R~~~~~~~t~Lv~~-~~~~~~~~G~~~~~~~il~i~~y~~~~~~~ts~fv-~~maf~aqisdp~iggTy 406 (510)
T KOG3574|consen 330 LNV-FLKAVPYRLGGGLVQTALVWW-TPTLGHSDGTFPRGYYILLITSYAFHQVFVTSMFV-SGMAFHAQISDPAIGGTY 406 (510)
T ss_pred chH-HHHhhhHHHHHHHHHHHHHhh-hcccccCCCceeechHHHHHHHHHHhhhHHHHHHH-HHHHHHhhcCCcccCccH
Confidence 100 000001111111111111111 1111 1 111111111 1122222222222 345667788999999999
Q ss_pred HHHHHHHHHHhhchhhHHHHHHHHhhcCCCCC
Q 017535 211 YAMDRSFESILSSFAPPVVGILAQHVYGFKPI 242 (370)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~g~l~~~~~g~~~~ 242 (370)
+.+.|...++|+-.-..+..++.|.. ++...
T Consensus 407 mTlLNTLsnLGg~wp~tv~l~l~D~l-tv~~C 437 (510)
T KOG3574|consen 407 MTLLNTLSNLGGNWPGTVALWLADGL-TVKQC 437 (510)
T ss_pred HHHHHHHHHhcCCcHHHHHHHhcccC-ceeec
Confidence 99999999999988888899999987 55544
No 258
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.12 E-value=0.032 Score=42.60 Aligned_cols=106 Identities=9% Similarity=0.035 Sum_probs=70.6
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCC
Q 017535 113 MALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPA 192 (370)
Q Consensus 113 ~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 192 (370)
.++......++.++.+.+.+++|.|+. ++++.+.-.+ ....++ .+ ..+.+...-.+.|++.+....
T Consensus 43 lai~Y~~~~~s~l~~P~iv~~lg~K~s-------m~lg~~~y~~-y~~~~~-~~----~~~~l~~~s~l~G~~~a~lW~- 108 (156)
T PF05978_consen 43 LAILYGSFAISCLFAPSIVNKLGPKWS-------MILGSLGYAI-YIASFF-YP----NSYTLYPASALLGFGAALLWT- 108 (156)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHhhHHH-------HHHHHHHHHH-HHHHHH-hh----hHHHHHHHHHHHhhhhHHhhH-
Confidence 344566677788888999999999865 3444333322 222221 11 134456666777777776666
Q ss_pred CccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHH
Q 017535 193 TNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGIL 232 (370)
Q Consensus 193 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l 232 (370)
..-.++.+...++.+++-.++.-.+.+.+..+|..+.-.+
T Consensus 109 aqg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 109 AQGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred hhhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5567788888888899999998888888777777655444
No 259
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=96.83 E-value=0.0019 Score=58.32 Aligned_cols=47 Identities=17% Similarity=0.251 Sum_probs=44.2
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCC
Q 017535 93 SFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFP 139 (370)
Q Consensus 93 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~ 139 (370)
..++.|++.+|+++.+.|.++...-+..+++.+++|+++||+.+++.
T Consensus 32 pll~vy~kQLGl~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~r~~r~ 78 (618)
T KOG3762|consen 32 PLLAVYFKQLGLNPAVVGTLTGTLPLVEFLAAPLWGFLADRYRKRRP 78 (618)
T ss_pred hHHHHHHHHcCCCHHHhhhhhhHHHHHHHHhHHHHHHHHHHHHhcCc
Confidence 57788999999999999999999999999999999999999998887
No 260
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.82 E-value=0.012 Score=55.78 Aligned_cols=129 Identities=11% Similarity=-0.033 Sum_probs=90.8
Q ss_pred HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHh---------------
Q 017535 100 ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLV--------------- 164 (370)
Q Consensus 100 ~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 164 (370)
+.++++..+.|++.+.+-++..+..++..+...|..|-+. +.++.++..+..++..+.
T Consensus 125 rRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~-------Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~ 197 (735)
T KOG3626|consen 125 RRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRW-------IGIGLVLMGLGSLLFALPHFFSGPYEYELEVIK 197 (735)
T ss_pred hhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccce-------eeechhHHHHHHHHHhChHHhcCcchhhhhhhh
Confidence 7799999999999999999999988888888888665544 122211111111111100
Q ss_pred ----CC---------------------------CCC-ChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHH
Q 017535 165 ----LP---------------------------DDP-STPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYA 212 (370)
Q Consensus 165 ----~~---------------------------~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 212 (370)
.+ ... ..+.++++..++.|++.....+ ...+++=|.+.+++...-.|
T Consensus 198 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~t-lGisYiDDnvk~~~SplYlg 276 (735)
T KOG3626|consen 198 QSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFT-LGISYIDDNVKKKNSPLYLG 276 (735)
T ss_pred ccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCcc-CCCccccccccccCCcHHHH
Confidence 00 000 1234566667777888777777 78888889888898999999
Q ss_pred HHHHHHHHhhchhhHHHHHHHHhh
Q 017535 213 MDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 213 ~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
+..++..+|-++|-.+++++...+
T Consensus 277 i~~~~~~lGPaiGfllgS~~l~lY 300 (735)
T KOG3626|consen 277 ILYSMAILGPAIGFLLGSFCLKLY 300 (735)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHee
Confidence 999999999999988888888776
No 261
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=96.79 E-value=0.16 Score=46.19 Aligned_cols=33 Identities=9% Similarity=-0.039 Sum_probs=19.7
Q ss_pred hHHHHHHHHHHHHHHHhcCCCCccchhccccCCCc
Q 017535 172 PVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKS 206 (370)
Q Consensus 172 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 206 (370)
.+..++..++.|++.+.... ...++.. .+|++.
T Consensus 106 f~~~~~~v~~~g~~~~~~q~-s~~gla~-~fp~~~ 138 (437)
T TIGR00939 106 FVTTMASVVIINSGMALLQG-SLFGLAG-VFPSTY 138 (437)
T ss_pred HHHHHHHHHHHHhhhhhhcc-cchhhcc-cCCHHH
Confidence 44455556667777776665 5555555 467653
No 262
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=96.52 E-value=0.028 Score=37.65 Aligned_cols=45 Identities=16% Similarity=0.255 Sum_probs=38.8
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhh
Q 017535 93 SFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSAR 137 (370)
Q Consensus 93 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~ 137 (370)
..+|...++.++|..+.+++.+...++..+|.+...++.++..++
T Consensus 13 plLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~ 57 (85)
T PF06779_consen 13 PLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPR 57 (85)
T ss_pred hHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHH
Confidence 456777799999999999999999999999999999888774434
No 263
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=96.48 E-value=0.0031 Score=55.82 Aligned_cols=131 Identities=15% Similarity=0.157 Sum_probs=81.5
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHH----HhhhCCCchhHHHHHHHHH-HHHHHHHHHHH----
Q 017535 93 SFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDF----LSARFPNSGRIILAQISSL-SAIPLAALLLL---- 163 (370)
Q Consensus 93 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---- 163 (370)
+|+|.|++..|.+....+.+....-+.+++..++.|..+|| +||||+. +..... +.+.+..+.+.
T Consensus 53 sy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPf------I~~~s~~i~~~l~Lig~aaDig 126 (498)
T KOG0637|consen 53 SYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPF------ILAGSLLIAVSLFLIGYAADIG 126 (498)
T ss_pred ccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccch------HHHhhHHHHHHHhhhhhHhhhh
Confidence 68999999999999999888877778888889999999996 5666651 111111 11111111110
Q ss_pred -hCCCCCCh-hHHHHHHHHHHHH-----HHHhcCCCCccchhccccCCCchhH-HHHHHHHHHHHhhchhhHHHH
Q 017535 164 -VLPDDPST-PVMHGLVLVVTGL-----FISWNAPATNNPIFAEIVPEKSRTS-VYAMDRSFESILSSFAPPVVG 230 (370)
Q Consensus 164 -~~~~~~~~-~~~~~~~~~~~g~-----~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~g 230 (370)
.+...... .-...+.++.+|+ ..-.... +.-+++.|...+.++-+ +++...++..+|+.+|-.+.+
T Consensus 127 ~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qg-p~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~ 200 (498)
T KOG0637|consen 127 LLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQG-PCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGS 200 (498)
T ss_pred HHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhh-hHHHHHHHhccChhhhhccchhHHHHHHhcceeeeeccc
Confidence 11111111 1112333344443 2223333 56788888887766666 999999999999988866654
No 264
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=96.21 E-value=0.022 Score=49.44 Aligned_cols=63 Identities=21% Similarity=0.192 Sum_probs=55.8
Q ss_pred hHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHh
Q 017535 172 PVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQH 235 (370)
Q Consensus 172 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~ 235 (370)
...+.+..++.|.+.+...+ ..++++.+..+++++++..++...+..+|..++|.+.+.+...
T Consensus 10 ~~~~l~~~f~~g~G~~~lq~-~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~ 72 (310)
T TIGR01272 10 YVLFLGALFVLASGLTILQV-AANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILS 72 (310)
T ss_pred HHHHHHHHHHHHhhHHHHHh-hHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhc
Confidence 44567778888888888888 8899999998998899999999999999999999999998854
No 265
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=96.05 E-value=0.077 Score=48.28 Aligned_cols=55 Identities=9% Similarity=0.044 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHH
Q 017535 173 VMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPV 228 (370)
Q Consensus 173 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 228 (370)
+...+..+++|+..|+... ....+..+.+++++|-.+..++.++..+|-.+|..+
T Consensus 373 ~~~~~~~~l~gltnGy~~s-~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l 427 (437)
T TIGR00939 373 AYFIILMLLFGFSNGYLGS-LSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVL 427 (437)
T ss_pred HHHHHHHHHHHHhhhHHHH-HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455667888888887776 667777777888888888888888888888877765
No 266
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=95.88 E-value=0.13 Score=44.33 Aligned_cols=155 Identities=11% Similarity=0.049 Sum_probs=80.9
Q ss_pred hhhHHHHhhhccchHHHHHHHHHhhhhhhHH-HHHHHHHHHHHhCCC--HHHHHHHHHHHHHHHHHhHHHHHHHHHHHhh
Q 017535 60 KVLIQEAKSVIKIPSFQIIVAQGVTGSFPWS-ALSFAAMWLELTGFS--HEKTAFLMALFVIASSLGGLFGGRMGDFLSA 136 (370)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~s--~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~ 136 (370)
...++++....+||.++...+...+..+++. +.+|....-++..-+ ...-|..=++..+.++++.++.|++.-.+.|
T Consensus 221 ~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV~nY~Q~LW~~~~~~~~~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r 300 (433)
T KOG3810|consen 221 VLLWRDLQECYSNPRLLKWSLWWALASCGYYQVTNYTQILWKEVAPNPANVYNGAVEAVSTLLGAIAALAAGYLNINWNR 300 (433)
T ss_pred HHHHHHHHHHhcCchhhhhHHHHHHhhchhHHHHHHHHHHHHhhCCCchhhhcCHHHHHHHHHHHHHHHHHHheeeccch
Confidence 3445577778889886555555555554433 334444443443211 1112333334456667777888887666555
Q ss_pred hCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHH
Q 017535 137 RFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRS 216 (370)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 216 (370)
... .+++..... -....++ ..... ..|...+..++.........+ +...-++.....+.-|..+|+..+
T Consensus 301 ~g~-------~ll~~~s~~-~agllf~-m~~t~-~Iw~~Ya~yvlfr~~y~l~it-iA~~~iA~nL~~e~~gLvFGiNTF 369 (433)
T KOG3810|consen 301 WGD-------LLLAVGSAV-QAGLLFI-MAQTQ-HIWVCYAGYVLFRVIYQLTIT-IATFQIARNLSSELFGLVFGINTF 369 (433)
T ss_pred hhH-------HHHHHHHHH-hhhhhhh-hhccc-ceehhhhhHHHHHhhHhhhhh-HHHHHHHHhhhhhhheeeeehHHH
Confidence 543 233222222 2222222 22222 244455555555554444444 445555666777888999999888
Q ss_pred HHHHhhchh
Q 017535 217 FESILSSFA 225 (370)
Q Consensus 217 ~~~~~~~~~ 225 (370)
+.-+-..+-
T Consensus 370 vAl~lQsil 378 (433)
T KOG3810|consen 370 VALILQSIL 378 (433)
T ss_pred HHHHHHHhh
Confidence 766555443
No 267
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=95.87 E-value=0.35 Score=43.23 Aligned_cols=128 Identities=16% Similarity=0.080 Sum_probs=81.2
Q ss_pred HHHHHHH-HH-hCCCHHHHHHHHHHH-HHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCC
Q 017535 93 SFAAMWL-EL-TGFSHEKTAFLMALF-VIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDP 169 (370)
Q Consensus 93 ~~~~~~~-~~-~g~s~~~~~~~~~~~-~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (370)
.|+..|+ .. .|++..+...-.-+. .=..++..++...+.|.++.|.. +++..+..+....++++ .
T Consensus 24 Pfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpv-------iil~~~~~i~t~~lll~--~--- 91 (412)
T PF01770_consen 24 PFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPV-------IILQALSYIITWLLLLF--G--- 91 (412)
T ss_pred ccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHH-------HHHHHHHHHHHHHHHHH--H---
Confidence 3556777 43 899998887655554 34666677788899999887754 33332322222222222 1
Q ss_pred ChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHH
Q 017535 170 STPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQ 234 (370)
Q Consensus 170 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~ 234 (370)
.....+-+.-+..|+..+.-. ..++++-..+|+++--++++.......+|..++..++-.+..
T Consensus 92 ~sv~~mq~~q~~yg~~~a~ev--ay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs 154 (412)
T PF01770_consen 92 TSVLAMQLMQFFYGLATAAEV--AYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVS 154 (412)
T ss_pred CcHHHHHHHHHHHHHHHHHHH--HHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 224445566667777655432 346777778888888888888888887777777766655554
No 268
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=95.79 E-value=0.58 Score=41.56 Aligned_cols=135 Identities=14% Similarity=0.190 Sum_probs=56.9
Q ss_pred HHHHHHHHhhhhhhHHHH-HHHHHHHHH-hCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHH
Q 017535 75 FQIIVAQGVTGSFPWSAL-SFAAMWLEL-TGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSL 152 (370)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~ 152 (370)
++.+++..+.....|..+ +-.+.|.+. .+.+. ...+...+.+.+.+..++...+.-+...|.. .++........
T Consensus 20 ~~i~~llGiG~LlpWN~fiTa~~y~~~~~~~~~~--~~~F~~~~~~~a~i~~ll~~~~n~~~~~~~~--~~~~~~l~~~~ 95 (406)
T KOG1479|consen 20 YLIFLLLGIGTLLPWNMFITASDYYYYRFPGYHN--SKNFTSSYTLAAQIPLLLFNLLNAFLNTRLR--TRVGYLLSLIA 95 (406)
T ss_pred HHHHHHHhcccccchHhhhccHHHHHhhcCCCch--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHH
Confidence 344444444344444444 444444443 34343 4444445555555555665555555554421 11111111111
Q ss_pred HHHHHHHHHHHhCCCC--CChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHH
Q 017535 153 SAIPLAALLLLVLPDD--PSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDR 215 (370)
Q Consensus 153 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 215 (370)
+.+...+.+.+.-... ....+...+.....+++.+.... ..+...+. .|++.....++-.+
T Consensus 96 il~i~~l~~~~v~~~~~~~~ff~vt~~~vv~~~~a~a~~qg-s~~G~a~~-~P~~ytqavm~G~a 158 (406)
T KOG1479|consen 96 ILFIVTLDLALVKTDTWTNGFFLVTLIIVVLLNLANAVVQG-SLYGLAGL-FPSEYTQAVMSGQA 158 (406)
T ss_pred HHHHHHHHHHhhccCCccchhHHHHHHHHHHHhhhhhhhcc-chhhhhhc-CCHHHHHHHHhcch
Confidence 1111111111101111 12233344445555666665554 44555554 67775544444333
No 269
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=95.57 E-value=0.063 Score=46.54 Aligned_cols=107 Identities=10% Similarity=0.073 Sum_probs=63.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccccCcccchhhhhhHHHHhhhccchHH-HHHHHHHhhhhhhHHH
Q 017535 13 RISFHIVGLISVVVGTLVRLFANDPHFPDGGTANSDQVSSKSFRSDVKVLIQEAKSVIKIPSF-QIIVAQGVTGSFPWSA 91 (370)
Q Consensus 13 r~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 91 (370)
.++|....++.++..++....-+|.......+ .+.. +...+.++.++++|+. .+.+...++-...|.+
T Consensus 195 vaPF~~a~~~l~~~~~~I~~~W~ENyg~~~~~--------~~~~---~~~~~a~~~i~~d~ril~LG~~qslFE~smy~F 263 (354)
T PF05631_consen 195 VAPFDAAIVLLAVAAVLILKTWPENYGDTSSS--------SSLS---GSFREAWRAILSDPRILLLGLIQSLFEGSMYLF 263 (354)
T ss_pred cchHHHHHHHHHHHHHHHHhcccccCCCcccc--------cchH---HHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHh
Confidence 77887766665555554443333321111100 0000 3344556678888884 4456667777766666
Q ss_pred H-HHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 017535 92 L-SFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDF 133 (370)
Q Consensus 92 ~-~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr 133 (370)
. .|.|..- ...+ ...|++++.++++.++|+.+..++..+
T Consensus 264 VflWtPaL~~~~~~---~P~GlIFssFM~a~MlGS~lf~~l~s~ 304 (354)
T PF05631_consen 264 VFLWTPALDPDDEE---LPLGLIFSSFMVAMMLGSSLFSRLLSK 304 (354)
T ss_pred eeeeeceecCCCCC---CCchHHHHHHHHHHHHHHHHHHHHHhC
Confidence 5 5777766 2222 347899999999999999888766554
No 270
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=94.87 E-value=0.075 Score=47.48 Aligned_cols=63 Identities=21% Similarity=0.123 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCCccchhccccCCC---chhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 173 VMHGLVLVVTGLFISWNAPATNNPIFAEIVPEK---SRTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 173 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
..+.+.+++++++.|..-| +..++..|.++++ ++.+.+..+.+..++|..+++.+.+++.+..
T Consensus 34 ~~~~~gL~lia~G~G~~K~-ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~ 99 (372)
T PF00854_consen 34 GLFYIGLALIAVGTGGIKP-NISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNY 99 (372)
T ss_dssp CHHHHHHHHHHHHHHCCHH-HHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS
T ss_pred HHHHHHHHHHHhccccccc-cHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhcccc
Confidence 4566677778888888888 8889999988765 4667788889999999999999888888766
No 271
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=94.74 E-value=0.3 Score=42.80 Aligned_cols=147 Identities=12% Similarity=0.045 Sum_probs=78.3
Q ss_pred HHHHHHHHHhhhhhhHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHH-----HHhhhCCCchhHHHHH
Q 017535 74 SFQIIVAQGVTGSFPWSALSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGD-----FLSARFPNSGRIILAQ 148 (370)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~d-----r~~~~~~~~~~~~~~~ 148 (370)
++..++...+...+.++...-+|.+++..|.|-.+.+.....+.=- ---+++..+.| |+|||+....+ +.
T Consensus 32 ~illLl~LYllQGiP~GL~~~iP~lL~ak~vSyt~~a~fS~ay~P~--sLKllWaPiVDs~y~k~~GrrksWvvp---~q 106 (510)
T KOG3574|consen 32 SILLLLFLYLLQGIPLGLIGAIPLLLQAKGVSYTSQAIFSFAYWPF--SLKLLWAPIVDSVYSKRFGRRKSWVVP---CQ 106 (510)
T ss_pred hHHHHHHHHHHcCCchhHhhhhHHHhcCCCcchhhhhhhhhhhhHH--HHHHHHHhhhHHHHHHhhccccceeee---hH
Confidence 3666666677777788877777888887888877766644433211 12456677777 99999863111 11
Q ss_pred HHHHHHHHHHHHHHHh---CC-CCC-ChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhc
Q 017535 149 ISSLSAIPLAALLLLV---LP-DDP-STPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSS 223 (370)
Q Consensus 149 ~~~~~~~~~~~~~~~~---~~-~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 223 (370)
. +++..+..+.... .. +.. .........+++.-|....--. ..-........+++.|-++.......+.|.+
T Consensus 107 ~--llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDI-AVDgwALtmLs~e~lgyaST~q~Vg~~~Gyf 183 (510)
T KOG3574|consen 107 Y--LLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDI-AVDGWALTMLSRENLGYASTCQSVGQTAGYF 183 (510)
T ss_pred H--HHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhh-hhhHHHHHhcCHhhcCchhHHHHHHHhhhHH
Confidence 1 1111111111100 01 111 1122232333444444443333 3444555566777788887777777777776
Q ss_pred hhhHH
Q 017535 224 FAPPV 228 (370)
Q Consensus 224 ~~~~~ 228 (370)
++..+
T Consensus 184 L~~~i 188 (510)
T KOG3574|consen 184 LGNVV 188 (510)
T ss_pred hhcce
Confidence 66443
No 272
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=94.72 E-value=0.13 Score=45.49 Aligned_cols=113 Identities=12% Similarity=0.066 Sum_probs=58.2
Q ss_pred HHHHHHH-HHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHH-HhCCCC---CChhHHHHHHHHHHH
Q 017535 109 TAFLMAL-FVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLL-LVLPDD---PSTPVMHGLVLVVTG 183 (370)
Q Consensus 109 ~~~~~~~-~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~g 183 (370)
.-+.... +++...+|.++..++-++ ++|.. .+..++-....-++. ...+.. -..-+........+|
T Consensus 284 ~~~~~~l~fN~~d~vG~~~a~~~~~~-~~r~l--------~i~v~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lg 354 (406)
T KOG1479|consen 284 ALLLVFLSFNVFDLIGSILAALLTWP-DPRKL--------TIPVLLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMSLLG 354 (406)
T ss_pred HHHHHHHHhHHHHHhhhhhhhcccCC-CCcee--------hHHHHHHHHHHHHHHHhccCCCCceecCchHHHHHHHHHH
Confidence 3344444 678888887777666554 23333 222222221111111 111111 111234556677788
Q ss_pred HHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHH
Q 017535 184 LFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGIL 232 (370)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l 232 (370)
+..|.... +...+..+.+|++++-.+-.+..++-..|-+.|. +.+++
T Consensus 355 lsnGYlts-l~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~-~~s~l 401 (406)
T KOG1479|consen 355 LSNGYLTS-LIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGS-LLSWV 401 (406)
T ss_pred hccchHhh-heehhcCCCCChHHHHHHHHHHHHHHHHHHHHhh-HHHHH
Confidence 88887776 6777778888877665555555544444444444 33443
No 273
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=94.39 E-value=1.6 Score=40.92 Aligned_cols=8 Identities=25% Similarity=0.484 Sum_probs=5.4
Q ss_pred hhhccchH
Q 017535 67 KSVIKIPS 74 (370)
Q Consensus 67 ~~~~~~~~ 74 (370)
..+||.|.
T Consensus 252 gDVFR~P~ 259 (521)
T PF02990_consen 252 GDVFRPPK 259 (521)
T ss_pred HHHhcCcC
Confidence 36777776
No 274
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=94.07 E-value=2.4 Score=40.20 Aligned_cols=145 Identities=19% Similarity=0.089 Sum_probs=82.8
Q ss_pred HHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHH------HHHH
Q 017535 89 WSALSFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPL------AALL 161 (370)
Q Consensus 89 ~~~~~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~------~~~~ 161 (370)
++...-+-.|+ ..++.+...+.-....+........+++++++|-+--|... +.++..+.... ....
T Consensus 54 ~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~t------I~~~s~i~~~G~~~lt~~a~~ 127 (571)
T KOG1237|consen 54 FGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFT------INIGSLISLLGLFGLTLSAMI 127 (571)
T ss_pred hcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHH------HHHHHHHHHHHHHHHHHHHHh
Confidence 34444555667 77888877777777777777778889999999986444331 12221111111 1111
Q ss_pred HHhCC-------C----CC-C--hhHHHHHHHHHHHHHHHhcCCCCccchhccccC---C-C--chhHHHHHHHHHHHHh
Q 017535 162 LLVLP-------D----DP-S--TPVMHGLVLVVTGLFISWNAPATNNPIFAEIVP---E-K--SRTSVYAMDRSFESIL 221 (370)
Q Consensus 162 ~~~~~-------~----~~-~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~---~-~--~~g~~~~~~~~~~~~~ 221 (370)
....+ . .. . ...++...+....++.|..-| +..+.-.|.++ + + .....+....+..++|
T Consensus 128 ~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~-~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g 206 (571)
T KOG1237|consen 128 PALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRP-CLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGG 206 (571)
T ss_pred hhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCC-cchhhcccccCccCcchhhCcccchhHHHHHHHHH
Confidence 11111 0 00 1 122344444555556666677 77788888887 2 2 2335666777777888
Q ss_pred hchhhHHHHHHHHhhcCCCC
Q 017535 222 SSFAPPVVGILAQHVYGFKP 241 (370)
Q Consensus 222 ~~~~~~~~g~l~~~~~g~~~ 241 (370)
..++..+.-++.+.. +|..
T Consensus 207 ~l~a~t~~vyiq~~~-~w~l 225 (571)
T KOG1237|consen 207 ALLAQTVLVYIQDNV-GWKL 225 (571)
T ss_pred HHHHHHHHHhhhhcc-ccee
Confidence 888777777766655 5443
No 275
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=93.89 E-value=0.34 Score=40.34 Aligned_cols=40 Identities=20% Similarity=0.130 Sum_probs=34.7
Q ss_pred HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCC
Q 017535 100 ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFP 139 (370)
Q Consensus 100 ~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~ 139 (370)
+.+|+...++|.++.......++...+.|-++||.|||+.
T Consensus 65 stYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKra 104 (454)
T KOG4332|consen 65 STYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRA 104 (454)
T ss_pred hhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccc
Confidence 7889999999988877777777888888999999999987
No 276
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=92.67 E-value=7.8 Score=35.54 Aligned_cols=44 Identities=16% Similarity=0.050 Sum_probs=36.8
Q ss_pred CccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 193 TNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 193 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
..+..+.|.+..++..+.+++.+...+++..++..+..++..+-
T Consensus 168 lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~~ 211 (509)
T COG3202 168 LFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKHR 211 (509)
T ss_pred HHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhch
Confidence 34667788888888999999999999999999888888877643
No 277
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=92.55 E-value=8.6 Score=35.52 Aligned_cols=79 Identities=9% Similarity=-0.055 Sum_probs=43.8
Q ss_pred hhhHHHHhhhccchHHHHHHHHHhhhhhhHHHH--HHHHHHHHHhCCCHHHH----HHHHHHHHHHHHHhHHHHHHHHHH
Q 017535 60 KVLIQEAKSVIKIPSFQIIVAQGVTGSFPWSAL--SFAAMWLELTGFSHEKT----AFLMALFVIASSLGGLFGGRMGDF 133 (370)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~s~~~~----~~~~~~~~~~~~ig~~~~g~l~dr 133 (370)
....+.++.++++|.++.+.+..++......+. .|- ..++...-++.+. |.+....++..++..++.+++.+|
T Consensus 251 ~~~~es~k~i~~S~yL~~ia~~vi~y~~~~nlve~~~k-~~v~~~~p~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~ 329 (472)
T TIGR00769 251 MSTMESLKFLVSSPYILDLALLVIAYGISINLVEVTWK-SKLKAQYPSPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRK 329 (472)
T ss_pred CCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456778888999998666555544433332222 122 2232222344332 333334455666666777888888
Q ss_pred HhhhCC
Q 017535 134 LSARFP 139 (370)
Q Consensus 134 ~~~~~~ 139 (370)
+|-+..
T Consensus 330 ~Gw~~~ 335 (472)
T TIGR00769 330 YGWLTA 335 (472)
T ss_pred hhHHHH
Confidence 887744
No 278
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=92.49 E-value=0.021 Score=49.44 Aligned_cols=55 Identities=9% Similarity=-0.004 Sum_probs=2.6
Q ss_pred HHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHH
Q 017535 174 MHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVV 229 (370)
Q Consensus 174 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 229 (370)
...+..+++|+..|+... ....+..+.++++++..+..+..++..+|-.+|..+.
T Consensus 250 ~~~i~~~l~g~TNGyl~t-l~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls 304 (309)
T PF01733_consen 250 WFIILMLLFGFTNGYLST-LAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLS 304 (309)
T ss_dssp -----------------H-HHH----------------------------------
T ss_pred HHHHHHHHHHHccchhhh-ceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355667778888887766 6677777788888888888888888787777776553
No 279
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=91.05 E-value=3.9 Score=34.36 Aligned_cols=142 Identities=18% Similarity=0.246 Sum_probs=71.0
Q ss_pred HHhhhccchHHHHH-HHHHhhhhhhHHHH-HHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCCCc
Q 017535 65 EAKSVIKIPSFQII-VAQGVTGSFPWSAL-SFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFPNS 141 (370)
Q Consensus 65 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~ 141 (370)
..+.+.++++..++ .+..++-...|.+. .|.|..- +..+.+ -|.+++.+.+++++|+-+..++..|-..|.-.
T Consensus 240 aa~aiaSD~ki~LLG~iqsLFE~smytFVFLWTPaLspn~e~iP---hGfiFatFMlASmLGSSla~Rl~s~s~~~ve~- 315 (454)
T KOG4332|consen 240 AARAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIP---HGFIFATFMLASMLGSSLASRLLSRSSPKVES- 315 (454)
T ss_pred hHHHHhcchHHHHHHHHHHHHhhhhheeeeeecccCCCCcccCC---chhHHHHHHHHHHHhhHHHHHHHhcCCcccch-
Confidence 34456666664433 34444444444444 4666554 344433 46777777888888887777666653333221
Q ss_pred hhHHHHHHHHHHHHHHHHHHHH---hCCCCCChhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHH
Q 017535 142 GRIILAQISSLSAIPLAALLLL---VLPDDPSTPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRS 216 (370)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 216 (370)
. +.+...+......+... ..|.. .....-.+.+..+-.+.|...| ...-+-.+..|.+.|++.+-+...
T Consensus 316 -y---mqivf~vs~a~l~Lpilt~~vsP~k-es~~~s~i~F~~~E~cvGlfwP-SimkmRsqyIPEearstimNfFRv 387 (454)
T KOG4332|consen 316 -Y---MQIVFLVSIAALLLPILTSSVSPSK-ESPSESLIGFCLFEACVGLFWP-SIMKMRSQYIPEEARSTIMNFFRV 387 (454)
T ss_pred -H---HHHHHHHHHHHHHHHHHHhccCCCc-CCchHHHHHHHHHHHHHhhcch-HHHHHHHhhCCHHHHhhhhhheec
Confidence 1 11111211111111111 11221 2222233334444556677777 666666778888888665554433
No 280
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=90.35 E-value=15 Score=34.15 Aligned_cols=80 Identities=9% Similarity=-0.075 Sum_probs=42.7
Q ss_pred hhhHHHHhhhccchHHHHHHHHHhhhhhhHHHH-HHHHHHHHHhCCCHHH----HHHHHHHHHHHHHHhHHHHHHHHHHH
Q 017535 60 KVLIQEAKSVIKIPSFQIIVAQGVTGSFPWSAL-SFAAMWLELTGFSHEK----TAFLMALFVIASSLGGLFGGRMGDFL 134 (370)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~s~~~----~~~~~~~~~~~~~ig~~~~g~l~dr~ 134 (370)
....+.++.++|+|.+..+.+..+.......+. .-.-..++..--++.+ .|......++..++..++++.+.+|+
T Consensus 267 ~s~~es~k~l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~iir~~ 346 (491)
T PF03219_consen 267 MSLKESFKLLLKSKYLLCIALLVIAYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRF 346 (491)
T ss_pred ccHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 445567778888998766655544444332222 1112222222223322 23334445666666667778888887
Q ss_pred hhhCC
Q 017535 135 SARFP 139 (370)
Q Consensus 135 ~~~~~ 139 (370)
|-+..
T Consensus 347 GW~~~ 351 (491)
T PF03219_consen 347 GWRTA 351 (491)
T ss_pred hHHHH
Confidence 76644
No 281
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=89.49 E-value=14 Score=32.42 Aligned_cols=125 Identities=17% Similarity=0.155 Sum_probs=63.1
Q ss_pred hCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHH-hhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHH
Q 017535 102 TGFSHEKTAFLMALFVIASSLGGLFGGRMGDFL-SARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLV 180 (370)
Q Consensus 102 ~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (370)
.|-+..+.+++.+.+..+..+|+.+.-++.|.- -.|.. ..-..++.+..+....+.+..........+++.+..+
T Consensus 38 lG~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv----~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly~lt~ 113 (508)
T COG4262 38 LGGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFV----DVELLLGLIGGVSAAALYLLFALESAPSRLVLYALTA 113 (508)
T ss_pred cCCceeehHHHHHHHHHHhchhhhhhccccCchHHHHHH----HHHHHHHHhccchHHHHHHHHHhccchHHHHHHHHHH
Confidence 455566777777777777777777666555431 11111 0011222222222222221111222224566777788
Q ss_pred HHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHH
Q 017535 181 VTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILA 233 (370)
Q Consensus 181 ~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~ 233 (370)
.+|.-.|.-.| ....++..... + .....+.....-++|...+..+..++.
T Consensus 114 vIG~LVG~EiP-L~mrml~~r~a-~-~k~~~s~vl~~DYLGal~~gLl~p~ll 163 (508)
T COG4262 114 VIGVLVGAEIP-LLMRMLQRRQA-K-AKDLGSRVLTLDYLGALAGGLLWPFLL 163 (508)
T ss_pred HHHHHHhcchH-HHHHHHHHHHH-H-HHhhhhhhhhhHhhhhhhHHHHHHHHH
Confidence 88888888777 66666655221 1 122222233336777766666655543
No 282
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=88.65 E-value=2.3 Score=32.11 Aligned_cols=31 Identities=6% Similarity=-0.071 Sum_probs=24.4
Q ss_pred CccchhccccCCCchhHHHHHHHHHHHHhhc
Q 017535 193 TNNPIFAEIVPEKSRTSVYAMDRSFESILSS 223 (370)
Q Consensus 193 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 223 (370)
+.|.+++...+++..|+..|+-.+-.+++-.
T Consensus 114 isYGilSaSWD~~r~GSllG~~e~~~N~~r~ 144 (153)
T PF11947_consen 114 ISYGILSASWDPEREGSLLGWEEFKRNWGRM 144 (153)
T ss_pred hhhhhcccccCCCCCCCcccHHHHHHhHHHH
Confidence 3466777778888899999999888887653
No 283
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=87.80 E-value=5.6 Score=36.41 Aligned_cols=110 Identities=10% Similarity=0.086 Sum_probs=73.2
Q ss_pred HHHHH-HHHHHHHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHH
Q 017535 108 KTAFL-MALFVIASSLGGLFGGRMGDFLSARFPNSGRIILAQISSLSAIPLAALLLLVLPDDPSTPVMHGLVLVVTGLFI 186 (370)
Q Consensus 108 ~~~~~-~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 186 (370)
.+|+. .++......+..++++.+.|+++.|.. ++++. .+....-+.++ .++ -+.++..-.+.|++.
T Consensus 50 ~aGy~~~aiiY~~ftv~~l~~psiv~~i~~K~~-------lv~ga-~~y~~f~~gfl-~~N----~y~~yfssallG~Ga 116 (461)
T KOG3098|consen 50 YAGYYGQAIIYAFFTVSCLFAPSIVNFLGPKWA-------LVIGA-TCYAAFPLGFL-FPN----SYYLYFSSALLGFGA 116 (461)
T ss_pred CccHHHHHHHHHHHHHHHHhhHHHHHHhhHHHH-------HHHHh-HHHHHHHHHHH-hcc----hHHHHHHHHHhhhhH
Confidence 34444 556678888899999999999999965 33332 22222222222 222 234556666777777
Q ss_pred HhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHH
Q 017535 187 SWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGI 231 (370)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~ 231 (370)
+.... -.-.++.+...++...+..++.-.+...+..+|..+.-.
T Consensus 117 allw~-GqG~ylt~~st~~tie~Nisi~Wai~~~~li~Ggi~l~~ 160 (461)
T KOG3098|consen 117 ALLWT-GQGGYLTSNSTRETIERNISIFWAIGQSSLIIGGIILFI 160 (461)
T ss_pred Hheec-ccceehhhcCChhhHHHHHHHHHHHHHHHHHhhhHhhee
Confidence 76555 557888888888889999999888888887777655433
No 284
>PRK10263 DNA translocase FtsK; Provisional
Probab=86.66 E-value=19 Score=37.37 Aligned_cols=18 Identities=6% Similarity=-0.062 Sum_probs=11.8
Q ss_pred HHhhchhhHHHHHHHHhh
Q 017535 219 SILSSFAPPVVGILAQHV 236 (370)
Q Consensus 219 ~~~~~~~~~~~g~l~~~~ 236 (370)
..||++|..+...+...+
T Consensus 141 ~gGGIIG~lLs~lL~~Lf 158 (1355)
T PRK10263 141 ASGGVIGSLLSTTLQPLL 158 (1355)
T ss_pred cccchHHHHHHHHHHHHH
Confidence 346777777766666655
No 285
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=86.43 E-value=23 Score=31.50 Aligned_cols=71 Identities=13% Similarity=-0.121 Sum_probs=36.1
Q ss_pred hccchHHHHHHHHHhhhhhhHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCC
Q 017535 69 VIKIPSFQIIVAQGVTGSFPWSALSFAAMWLELTGF-SHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFP 139 (370)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~ 139 (370)
+++...+.+.+.+++..+.--.--.-...|+..++- +....+....+-....++-..+.|...|+..|+|.
T Consensus 24 ~ls~~~i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kv 95 (503)
T KOG2601|consen 24 LLSSTVIFLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKV 95 (503)
T ss_pred cccceeehhhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHH
Confidence 344444444555544443332211223556644433 33344443334455555666667778888888775
No 286
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=85.28 E-value=11 Score=34.30 Aligned_cols=32 Identities=16% Similarity=-0.011 Sum_probs=25.4
Q ss_pred hhHHHHHHHHHHHHhhchhhHHHHHHHHhhcC
Q 017535 207 RTSVYAMDRSFESILSSFAPPVVGILAQHVYG 238 (370)
Q Consensus 207 ~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~~g 238 (370)
+|...|+.|....+.+.+.....|.+.+..|+
T Consensus 442 ~G~~~gvln~~I~ipQvivs~~~Gp~~~~~G~ 473 (498)
T KOG0637|consen 442 QGLDLGVLNCAIVIPQVLVSLGLGPLDQLFGG 473 (498)
T ss_pred CCceeeeeeeeeeehhheeeccccchhhhcCC
Confidence 47777888888888888888878888888744
No 287
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=84.53 E-value=6.5 Score=35.33 Aligned_cols=25 Identities=12% Similarity=-0.018 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHh
Q 017535 111 FLMALFVIASSLGGLFGGRMGDFLS 135 (370)
Q Consensus 111 ~~~~~~~~~~~ig~~~~g~l~dr~~ 135 (370)
.+...-.+.+++..+++.+..+|+.
T Consensus 63 ~Vlladi~P~l~~Kl~aP~fi~~v~ 87 (402)
T PF02487_consen 63 AVLLADILPSLLVKLIAPFFIHRVP 87 (402)
T ss_pred HHHHHHHHHHHHHHHHhHhhhhhcc
Confidence 3444445566677777888877764
No 288
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=83.85 E-value=4 Score=36.66 Aligned_cols=17 Identities=12% Similarity=-0.056 Sum_probs=9.8
Q ss_pred HHHHHhHHHHHHHHHHH
Q 017535 118 IASSLGGLFGGRMGDFL 134 (370)
Q Consensus 118 ~~~~ig~~~~g~l~dr~ 134 (370)
+..++..++.|++..|+
T Consensus 6 i~~i~~ii~~G~~~~~~ 22 (385)
T PF03547_consen 6 ILPIFLIILLGYLLGRF 22 (385)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 34444555666776665
No 289
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=83.78 E-value=4.4 Score=34.76 Aligned_cols=57 Identities=11% Similarity=-0.085 Sum_probs=40.6
Q ss_pred hHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHH
Q 017535 172 PVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVV 229 (370)
Q Consensus 172 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 229 (370)
.+++.++++.-|+..|..+. +++--+.+-.+++.|-.+++.....-.+|..++..+.
T Consensus 342 i~ivf~lI~~EGLlGGasYV-NTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~la 398 (409)
T KOG3880|consen 342 IWIVFALILFEGLLGGASYV-NTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLA 398 (409)
T ss_pred HHHHHHHHHHHhhcCchHHH-HHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHh
Confidence 55566667777887776666 5555666667888899999988877777766655443
No 290
>KOG1277 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=81.79 E-value=40 Score=30.57 Aligned_cols=16 Identities=19% Similarity=0.106 Sum_probs=8.5
Q ss_pred ccccccCchhHHHHHH
Q 017535 5 TFMGIPGWRISFHIVG 20 (370)
Q Consensus 5 ~~~~~~gWr~~f~i~~ 20 (370)
++-.+..|-.+|--+-
T Consensus 219 ff~h~IHWfSIfNSfm 234 (593)
T KOG1277|consen 219 FFPHRIHWFSIFNSFM 234 (593)
T ss_pred cccceeehhhHHHHHH
Confidence 3444556776664333
No 291
>KOG2568 consensus Predicted membrane protein [Function unknown]
Probab=81.68 E-value=45 Score=30.97 Aligned_cols=40 Identities=15% Similarity=0.072 Sum_probs=17.8
Q ss_pred HHhCCCHHHHHHHHHHHHH-HHHHhHHHHHHHHHHHhhhCC
Q 017535 100 ELTGFSHEKTAFLMALFVI-ASSLGGLFGGRMGDFLSARFP 139 (370)
Q Consensus 100 ~~~g~s~~~~~~~~~~~~~-~~~ig~~~~g~l~dr~~~~~~ 139 (370)
+..|.++.....+..+... =-.+..++.-.++-=+|.-++
T Consensus 260 N~tG~~~~~~~~~a~i~sa~K~Tlsr~LlLIVSlGYGIVkP 300 (518)
T KOG2568|consen 260 NSTGMSPKVYTVFASILSAIKKTLSRLLLLIVSLGYGIVKP 300 (518)
T ss_pred cccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCcceEec
Confidence 5567766555544444422 223334443333333444333
No 292
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=81.57 E-value=8.1 Score=35.60 Aligned_cols=37 Identities=3% Similarity=-0.146 Sum_probs=24.2
Q ss_pred CccchhccccCCCchhHHHHHHHHHHHHhhchhhHHH
Q 017535 193 TNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVV 229 (370)
Q Consensus 193 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 229 (370)
.+-........+++.+-++.......++|-+++-.+.
T Consensus 138 AVDGWALT~Ls~~n~~~ASTcqtvG~~~Gyfls~tvF 174 (544)
T PF13000_consen 138 AVDGWALTMLSPENVGYASTCQTVGQTAGYFLSFTVF 174 (544)
T ss_pred eeehhhhhhcChhhcchHHHHHHhHhhhhHHHHHHHH
Confidence 3344444556777788888777777777776665444
No 293
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=81.04 E-value=14 Score=25.89 Aligned_cols=36 Identities=22% Similarity=0.141 Sum_probs=29.4
Q ss_pred CCchhHHHHHHHHHHHHhhchhhHHHHHHHHhhcCC
Q 017535 204 EKSRTSVYAMDRSFESILSSFAPPVVGILAQHVYGF 239 (370)
Q Consensus 204 ~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~~g~ 239 (370)
+..++.+.++-...-.+++.+.....||+.|++.|-
T Consensus 37 ~s~k~~~~a~klssefIsGilVGa~iG~llD~~agT 72 (116)
T COG5336 37 ESIKGYAQAFKLSSEFISGILVGAGIGWLLDKFAGT 72 (116)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 455778888888888899988889999999998553
No 294
>KOG1278 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=75.81 E-value=5.2 Score=36.87 Aligned_cols=32 Identities=22% Similarity=0.257 Sum_probs=18.7
Q ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Q 017535 104 FSHEKTAFLMALFVIASSLGGLFGGRMGDFLS 135 (370)
Q Consensus 104 ~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~ 135 (370)
+++..=|.+++...+..++..+++|+.+-|+-
T Consensus 356 lSPs~RGsLmT~~~~l~v~~G~~agY~s~rly 387 (628)
T KOG1278|consen 356 LSPSSRGSLMTAMVLLFVFMGFVAGYVSARLY 387 (628)
T ss_pred CCccccccHHHHHHHHHHHHHHhhhhhhhhhH
Confidence 45555555555555555566666666666654
No 295
>PF00558 Vpu: Vpu protein; InterPro: IPR008187 The Human immunodeficiency virus 1 (HIV-1) Vpu protein acts in the degradation of CD4 in the endoplasmic reticulum and in the enhancement of virion release from the plasma membrane of infected cells [].; GO: 0019076 release of virus from host; PDB: 2JPX_A 1PI8_A 2GOH_A 2GOF_A 1PI7_A 1PJE_A 1VPU_A 2K7Y_A.
Probab=74.92 E-value=5.3 Score=26.38 Aligned_cols=23 Identities=9% Similarity=0.515 Sum_probs=7.0
Q ss_pred HHHHHHHHHHHHHHhcCcccHHH
Q 017535 272 IPMALCCFIYSFLYSTYPRDRER 294 (370)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~ 294 (370)
+.++++.+++.+.+..|++.++.
T Consensus 14 v~~iiaIvvW~iv~ieYrk~~rq 36 (81)
T PF00558_consen 14 VALIIAIVVWTIVYIEYRKIKRQ 36 (81)
T ss_dssp HHHHHHHHHHHHH----------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 33345556666666666655444
No 296
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=74.91 E-value=72 Score=29.62 Aligned_cols=78 Identities=10% Similarity=-0.057 Sum_probs=37.4
Q ss_pred hhHHHHhhhccchHHHHHHHHHhhhhhhHHHH--HHHHHHHHHhCCCHHH---HHHHHHHHHHH-HHHhHHHHHHHHHHH
Q 017535 61 VLIQEAKSVIKIPSFQIIVAQGVTGSFPWSAL--SFAAMWLELTGFSHEK---TAFLMALFVIA-SSLGGLFGGRMGDFL 134 (370)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~s~~~---~~~~~~~~~~~-~~ig~~~~g~l~dr~ 134 (370)
...+.++.++|+|.++.+.+..++........ .|-...-+.+-.+... .|.+....++. .++...+++.+..|.
T Consensus 270 ~~~~s~k~i~~SkyL~~ial~vl~Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~ 349 (509)
T COG3202 270 GLIESFKMILRSKYLGAIALLVLAYGVSINLVEGVWKSGIKELYPTTNEYTAFMGRFQIWTGVVSLVVFLFPGSNLIRRV 349 (509)
T ss_pred cHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHh
Confidence 34556677888888666555444433332222 2322222222222222 22333334444 445556777777776
Q ss_pred hhhC
Q 017535 135 SARF 138 (370)
Q Consensus 135 ~~~~ 138 (370)
|-..
T Consensus 350 GW~~ 353 (509)
T COG3202 350 GWFT 353 (509)
T ss_pred hHHH
Confidence 6543
No 297
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=70.40 E-value=75 Score=27.91 Aligned_cols=71 Identities=13% Similarity=0.265 Sum_probs=43.8
Q ss_pred hhccchHHHHHHHHHhhhhhhHHHH--HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCC
Q 017535 68 SVIKIPSFQIIVAQGVTGSFPWSAL--SFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFP 139 (370)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~ 139 (370)
+.++++++..++-...+...-..+. .+.-.|. .-++.....+..+..+++...+.+.+.|.+..+++|...
T Consensus 270 ~~l~~~r~~llvP~tif~GleqaF~~~~fTk~~V-~c~~Gv~~igf~m~cfgv~~Av~S~~~g~L~~~~gr~~~ 342 (390)
T KOG3097|consen 270 KHLRDIRLRLLVPLTIFSGLEQAFLCADFTKAYV-ACALGVSRIGFAMACFGVGDAVASSLFGLLGKWIGRPPL 342 (390)
T ss_pred HHhcCcceeeeehhhhhhHHHHHHHHhhhhhhhh-hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccH
Confidence 3455666554444443333332221 1222222 123345678888999999999999999999999998865
No 298
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=66.56 E-value=0.16 Score=41.87 Aligned_cols=34 Identities=12% Similarity=0.184 Sum_probs=23.2
Q ss_pred HHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHH
Q 017535 93 SFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLF 126 (370)
Q Consensus 93 ~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~ 126 (370)
.|++.|. .+..+..+..+++-.+..+++..-+.+
T Consensus 222 aYlaFfviddlqm~qsakAllP~v~Yl~SF~VS~v 256 (412)
T KOG4830|consen 222 AYLAFFVIDDLQMEQSAKALLPMVAYLSSFSVSMV 256 (412)
T ss_pred hheeeEEeehhhHHHHHhhhhHHHHHHhhhhHHhh
Confidence 5778777 777787777777766666666554443
No 299
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=66.22 E-value=46 Score=23.85 Aligned_cols=31 Identities=26% Similarity=0.405 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhhh
Q 017535 107 EKTAFLMALFVIASSLGGLFGGRMGDFLSAR 137 (370)
Q Consensus 107 ~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~ 137 (370)
...+.......++..++..+.+.+.|..+.+
T Consensus 87 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 117 (141)
T TIGR00880 87 VALGLMSAGIALGPLLGPPLGGVLAQFLGWR 117 (141)
T ss_pred HHHHHHHHhHHHHHHHhHHhHHHHhcccchH
Confidence 3445555566777788888888887765543
No 300
>PHA03237 envelope glycoprotein M; Provisional
Probab=64.73 E-value=1.1e+02 Score=27.76 Aligned_cols=7 Identities=29% Similarity=0.814 Sum_probs=4.4
Q ss_pred cccCchh
Q 017535 8 GIPGWRI 14 (370)
Q Consensus 8 ~~~gWr~ 14 (370)
+...||.
T Consensus 18 D~i~~r~ 24 (424)
T PHA03237 18 DYIHWRL 24 (424)
T ss_pred chhhHHH
Confidence 4567774
No 301
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=64.38 E-value=1.5e+02 Score=29.07 Aligned_cols=24 Identities=4% Similarity=0.184 Sum_probs=17.3
Q ss_pred ccCchhHHHHHHHHHHHHHHHHHH
Q 017535 9 IPGWRISFHIVGLISVVVGTLVRL 32 (370)
Q Consensus 9 ~~gWr~~f~i~~~~~~i~~~~~~~ 32 (370)
+.+|...|.+.+++.++..++...
T Consensus 157 ~~~~~~aF~i~~i~m~ia~lvf~~ 180 (654)
T TIGR00926 157 QDCYPLAFGVPAILMILALIVFMA 180 (654)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHH
Confidence 457999999988877766555443
No 302
>PF01810 LysE: LysE type translocator; InterPro: IPR001123 Lysine exporter protein is involved in the efflux of excess L-lysine as a control for intracellular levels of L-lysine. A number of proteins belong to this family. These include the chemotactic transduction protein from Pseudomonas aeruginosa, the threonine efflux protein and a number of uncharacterised proteins from a variety of sources.; GO: 0006865 amino acid transport, 0016020 membrane
Probab=63.27 E-value=73 Score=25.13 Aligned_cols=24 Identities=25% Similarity=0.202 Sum_probs=11.9
Q ss_pred HHHHHHHHhHHHHHHHHHHHhhhC
Q 017535 115 LFVIASSLGGLFGGRMGDFLSARF 138 (370)
Q Consensus 115 ~~~~~~~ig~~~~g~l~dr~~~~~ 138 (370)
...++..+.....+.+..|..++.
T Consensus 141 ~~~~~~~~w~~~~~~~~~~~~~~~ 164 (191)
T PF01810_consen 141 GIFLGSLLWFLLLALLGSRLRRKF 164 (191)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444455555555555443
No 303
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=63.25 E-value=3.7 Score=30.32 Aligned_cols=20 Identities=5% Similarity=0.158 Sum_probs=10.8
Q ss_pred hhHHHHHHHHHHHHHHHHHH
Q 017535 13 RISFHIVGLISVVVGTLVRL 32 (370)
Q Consensus 13 r~~f~i~~~~~~i~~~~~~~ 32 (370)
||+++++.++.+++.+++++
T Consensus 1 RW~l~~iii~~i~l~~~~~~ 20 (130)
T PF12273_consen 1 RWVLFAIIIVAILLFLFLFY 20 (130)
T ss_pred CeeeHHHHHHHHHHHHHHHH
Confidence 67776665555544444433
No 304
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=63.16 E-value=1.3e+02 Score=28.13 Aligned_cols=36 Identities=19% Similarity=0.395 Sum_probs=30.1
Q ss_pred HhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhh
Q 017535 101 LTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSA 136 (370)
Q Consensus 101 ~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~ 136 (370)
..-.+..|+.-++..+++++-+|.+++|.+...+.+
T Consensus 170 N~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 170 NEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344678889999999999999999999998888777
No 305
>KOG3817 consensus Uncharacterized conserved protein [Function unknown]
Probab=61.54 E-value=17 Score=31.52 Aligned_cols=17 Identities=6% Similarity=-0.308 Sum_probs=11.1
Q ss_pred hHHHHHHHHHHHhhhCC
Q 017535 123 GGLFGGRMGDFLSARFP 139 (370)
Q Consensus 123 g~~~~g~l~dr~~~~~~ 139 (370)
.-++.-++..|+-.|+.
T Consensus 175 SLl~Viflv~rf~PKkt 191 (452)
T KOG3817|consen 175 SLLVVIFLVARFFPKKT 191 (452)
T ss_pred HHHHHHHHHHHhccccc
Confidence 33455677778777765
No 306
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=60.54 E-value=57 Score=22.98 Aligned_cols=23 Identities=26% Similarity=0.193 Sum_probs=15.3
Q ss_pred HHHHHHhHHHHHHHHHHHhhhCC
Q 017535 117 VIASSLGGLFGGRMGDFLSARFP 139 (370)
Q Consensus 117 ~~~~~ig~~~~g~l~dr~~~~~~ 139 (370)
.+++++-....||+.||+-...+
T Consensus 52 fIsGilVGa~iG~llD~~agTsP 74 (116)
T COG5336 52 FISGILVGAGIGWLLDKFAGTSP 74 (116)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCc
Confidence 44555555667899999765544
No 307
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=59.41 E-value=13 Score=26.14 Aligned_cols=31 Identities=23% Similarity=0.376 Sum_probs=23.1
Q ss_pred cccCchhHHHHHHHHHHHHHHHHHHhcCCCC
Q 017535 8 GIPGWRISFHIVGLISVVVGTLVRLFANDPH 38 (370)
Q Consensus 8 ~~~gWr~~f~i~~~~~~i~~~~~~~~~~~~~ 38 (370)
+..+|+.+|++...++++++.+.+.+.||..
T Consensus 55 d~e~we~~~f~~~~~~~v~~~~~~~y~PD~~ 85 (105)
T PF10183_consen 55 DWEGWELPFFFGFSGSLVFGGVFLAYKPDTS 85 (105)
T ss_pred hHhhhHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 4568999999877777777777777666643
No 308
>KOG2927 consensus Membrane component of ER protein translocation complex [Intracellular trafficking, secretion, and vesicular transport]
Probab=51.14 E-value=48 Score=28.91 Aligned_cols=17 Identities=24% Similarity=-0.128 Sum_probs=7.5
Q ss_pred HHHHHHHHHHHHHhcCC
Q 017535 175 HGLVLVVTGLFISWNAP 191 (370)
Q Consensus 175 ~~~~~~~~g~~~~~~~~ 191 (370)
++++++.++......+|
T Consensus 192 vl~~~fvl~tlaivLFP 208 (372)
T KOG2927|consen 192 VLGVLFVLVTLAIVLFP 208 (372)
T ss_pred HHHHHHHHHHHHHHhcc
Confidence 33344444444444455
No 309
>PF09930 DUF2162: Predicted transporter (DUF2162); InterPro: IPR017199 This group represents a predicted membrane transporter, MTH672 type.
Probab=47.17 E-value=1.6e+02 Score=24.19 Aligned_cols=37 Identities=16% Similarity=0.222 Sum_probs=24.3
Q ss_pred HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCC
Q 017535 100 ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFP 139 (370)
Q Consensus 100 ~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~ 139 (370)
+..+++..+.|..........+ +..-.+.+|.+.+.+
T Consensus 124 ~~~~~s~~~ig~~~g~if~i~i---l~ss~i~r~~~~~~p 160 (224)
T PF09930_consen 124 PSIGLSGWEIGLVLGLIFFILI---LLSSFIFRRLKKPYP 160 (224)
T ss_pred HhcCchHHHHHHHHHHHHHHHH---HHHHHHHHHhcCCCc
Confidence 6788899888887765544433 555566666664544
No 310
>COG4698 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=47.08 E-value=28 Score=26.96 Aligned_cols=22 Identities=27% Similarity=0.688 Sum_probs=13.7
Q ss_pred chhHHHHHHHHHHHHHHHHHHh
Q 017535 12 WRISFHIVGLISVVVGTLVRLF 33 (370)
Q Consensus 12 Wr~~f~i~~~~~~i~~~~~~~~ 33 (370)
|+|.|+++-.+-.++++....+
T Consensus 11 WKw~f~iLLAln~l~~~~i~~~ 32 (197)
T COG4698 11 WKWLFFILLALNTLLAVLIALF 32 (197)
T ss_pred HHHHHHHHHHHHHHHHHHhhee
Confidence 9999988765554444433333
No 311
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=47.06 E-value=2.7e+02 Score=26.78 Aligned_cols=65 Identities=11% Similarity=0.038 Sum_probs=48.8
Q ss_pred hhHHHHHHHHHHHHHHHhcCCCCccchhccccCCCchhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 171 TPVMHGLVLVVTGLFISWNAPATNNPIFAEIVPEKSRTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 171 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
+.+...--.+++|++-.+... ...-..-+..|++.|+.++++......+|..++..+........
T Consensus 457 Si~W~iPQyvLig~~Evf~~v-g~lEFfY~qaP~sMkS~~~al~l~t~a~G~~lss~Lv~~v~~~t 521 (571)
T KOG1237|consen 457 SILWQIPQYVLLGAGEVFTSV-GGLEFFYSQAPESMKSVATALWLLTVAVGNYLSSVLVSLVQFST 521 (571)
T ss_pred eHHHHHHHHHHHHHHHHHHhh-hhHHHhHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 344455556677777666555 44555566789999999999999999999999998887766655
No 312
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=47.00 E-value=6.4 Score=32.79 Aligned_cols=20 Identities=30% Similarity=0.526 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHhc
Q 017535 15 SFHIVGLISVVVGTLVRLFA 34 (370)
Q Consensus 15 ~f~i~~~~~~i~~~~~~~~~ 34 (370)
+++.++.+.+++++++++++
T Consensus 23 a~l~~~~llll~ail~w~~i 42 (381)
T PF05297_consen 23 ASLLFGLLLLLVAILVWFFI 42 (381)
T ss_dssp --------------------
T ss_pred hhHHHHHHHHHHHHHHHHHH
Confidence 34555655566666555553
No 313
>PF14851 FAM176: FAM176 family
Probab=45.64 E-value=20 Score=27.23 Aligned_cols=14 Identities=36% Similarity=0.401 Sum_probs=6.5
Q ss_pred HHHHHHHHHHHHHH
Q 017535 263 AKALYTAIGIPMAL 276 (370)
Q Consensus 263 ~~~~~~~~~~~~~~ 276 (370)
+.+++++..+++.+
T Consensus 21 ~~aLYFv~gVC~GL 34 (153)
T PF14851_consen 21 RFALYFVSGVCAGL 34 (153)
T ss_pred HHHHHHHHHHHHHH
Confidence 34555554444443
No 314
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=43.20 E-value=42 Score=28.27 Aligned_cols=48 Identities=21% Similarity=0.340 Sum_probs=38.0
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHH---------HHHHhhhCCC
Q 017535 93 SFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRM---------GDFLSARFPN 140 (370)
Q Consensus 93 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l---------~dr~~~~~~~ 140 (370)
+|+-.|+++.|.++...+.++....+...+..++.|.. .||+|||+..
T Consensus 38 TYlllfltqiglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~G~~~~w 94 (412)
T KOG4830|consen 38 TYLLLFLTQIGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRIGRRMSW 94 (412)
T ss_pred HHHHHHHHHhcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhhcceeee
Confidence 66777888899999888888877788888888887643 5789988753
No 315
>PF13386 DsbD_2: Cytochrome C biogenesis protein transmembrane region
Probab=42.58 E-value=1.7e+02 Score=23.29 Aligned_cols=36 Identities=28% Similarity=0.225 Sum_probs=28.2
Q ss_pred CCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhC
Q 017535 103 GFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARF 138 (370)
Q Consensus 103 g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~ 138 (370)
.-|+.........++++.+...++.+.+..+.+++.
T Consensus 146 s~s~~~G~l~m~~FgLGT~p~ll~~~~~~~~l~~~~ 181 (199)
T PF13386_consen 146 SGSPLYGALLMLAFGLGTLPALLLAGLLAGKLSRRL 181 (199)
T ss_pred cCChHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 447777778888889999888888888888876653
No 316
>PF03606 DcuC: C4-dicarboxylate anaerobic carrier; InterPro: IPR018385 Escherichia coli contains four different secondary carriers (DcuA, DcuB, DcuC, and DctA) for C4-dicarboxylates [, , , ] DcuA is used for aerobic growth on C4-dicarboxylates [, ], whereas the Dcu carriers (encoded by the dcuA, dcuB, and dcuC genes) are used under anaerobic conditions and form a distinct family of carriers [, , , , , ]. Each of the Dcu carriers is able to catalyze the uptake, antiport, and possibly also efflux of C4-dicarboxylates. DcuB is the major C4-dicarboxylate carrier for fumarate respiration with high fumarate-succinate exchange activity. It is synthesized only in the absence of oxygen and nitrate and in the presence of C4-dicarboxylates [, , , ]. DcuA is expressed constitutively in aerobic and anaerobic growth and can substitute for DcuB [, ]. These proteins are members of the C4-dicarboxylate Uptake C (DcuC) family. DcuC has 12 GES predicted transmembrane regions, is induced only under anaerobic conditions, and is not repressed by glucose. DcuC may therefore function as a succinate efflux system during anaerobic glucose fermentation. However, when overexpressed, it can replace either DcuA or DcuB in catalyzing fumarate-succinate exchange and fumarate uptake [, ]. DcuC shows the same transport modes as DcuA and DcuB (exchange, uptake, and presumably efflux of C4-dicarboxylates) [].; GO: 0016021 integral to membrane
Probab=40.89 E-value=3e+02 Score=25.60 Aligned_cols=12 Identities=8% Similarity=-0.100 Sum_probs=6.5
Q ss_pred HHHHHHHhhhCC
Q 017535 128 GRMGDFLSARFP 139 (370)
Q Consensus 128 g~l~dr~~~~~~ 139 (370)
..+.+|+++++.
T Consensus 105 ~~l~k~l~~~~~ 116 (465)
T PF03606_consen 105 NLLIKPLKGKKN 116 (465)
T ss_pred HHHHHHhcCCcc
Confidence 345566655544
No 317
>COG4177 LivM ABC-type branched-chain amino acid transport system, permease component [Amino acid transport and metabolism]
Probab=40.03 E-value=2.6e+02 Score=24.47 Aligned_cols=26 Identities=12% Similarity=0.140 Sum_probs=13.1
Q ss_pred chhHHHHHHHHHHHHHHHHHHhcCCC
Q 017535 12 WRISFHIVGLISVVVGTLVRLFANDP 37 (370)
Q Consensus 12 Wr~~f~i~~~~~~i~~~~~~~~~~~~ 37 (370)
++..|++...+.++..++.....++|
T Consensus 156 ~~~~y~~~l~~l~l~~~~~~~l~~S~ 181 (314)
T COG4177 156 ARGLYYLALLLLLLTLLVLERLVRSP 181 (314)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 34445544444455455555555554
No 318
>PF15061 DUF4538: Domain of unknown function (DUF4538)
Probab=39.83 E-value=39 Score=20.69 Aligned_cols=26 Identities=19% Similarity=0.634 Sum_probs=19.2
Q ss_pred cCchhHHHHHHHHHHHHHHHHHHhcC
Q 017535 10 PGWRISFHIVGLISVVVGTLVRLFAN 35 (370)
Q Consensus 10 ~gWr~~f~i~~~~~~i~~~~~~~~~~ 35 (370)
-|||...++.++++++.+.+.-..++
T Consensus 3 rg~r~~~~~ggfVg~iG~a~Ypi~~~ 28 (58)
T PF15061_consen 3 RGWRYALFVGGFVGLIGAALYPIYFR 28 (58)
T ss_pred ccccchhhHHHHHHHHHHHHhhhhcc
Confidence 48999999998888876665544433
No 319
>PF09911 DUF2140: Uncharacterized protein conserved in bacteria (DUF2140); InterPro: IPR018672 This family of conserved hypothetical proteins has no known function.
Probab=39.80 E-value=30 Score=27.47 Aligned_cols=15 Identities=20% Similarity=0.514 Sum_probs=10.3
Q ss_pred CchhHHHHHHHHHHH
Q 017535 11 GWRISFHIVGLISVV 25 (370)
Q Consensus 11 gWr~~f~i~~~~~~i 25 (370)
-|+|.|+++..+-++
T Consensus 2 ~WK~aF~~Lla~~l~ 16 (187)
T PF09911_consen 2 WWKWAFLILLALNLA 16 (187)
T ss_pred hHHHHHHHHHHHHHH
Confidence 499999986544333
No 320
>COG1480 Predicted membrane-associated HD superfamily hydrolase [General function prediction only]
Probab=39.74 E-value=3.7e+02 Score=26.26 Aligned_cols=23 Identities=4% Similarity=-0.126 Sum_probs=11.8
Q ss_pred cccCchhHHHHHHHHHHHHHHHH
Q 017535 8 GIPGWRISFHIVGLISVVVGTLV 30 (370)
Q Consensus 8 ~~~gWr~~f~i~~~~~~i~~~~~ 30 (370)
...+|++.......+.+++.++.
T Consensus 270 ~s~~~~~~~~~~~~v~~li~lf~ 292 (700)
T COG1480 270 LSVNILPLLGLLILVIFLILLFA 292 (700)
T ss_pred ccccHHHHHHHHHHHHHHHHHHH
Confidence 34567766655544444443333
No 321
>cd02432 Nodulin-21_like_1 Nodulin-21 and CCC1-related protein family. Nodulin-21_like_1: This is a family of proteins closely related to nodulin-21, a plant nodule-specific protein that may be involved in symbiotic nitrogen fixation. This family is also related to CCC1, a yeast vacuole transmembrane protein that functions as an iron and manganese transporter.
Probab=39.62 E-value=2.1e+02 Score=23.39 Aligned_cols=33 Identities=15% Similarity=-0.021 Sum_probs=18.9
Q ss_pred HHHHHhHHHHHHHHHHHhhhCCCchhHHHHHHH
Q 017535 118 IASSLGGLFGGRMGDFLSARFPNSGRIILAQIS 150 (370)
Q Consensus 118 ~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~ 150 (370)
+...+.-++.|.+.-|+.++...+...+...++
T Consensus 172 ~~~~~aL~~~G~~~a~~~~~~~~~~~l~~~~iG 204 (218)
T cd02432 172 IATLLALALTGYVSARLGGASVLRAILRNVIWG 204 (218)
T ss_pred HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Confidence 345556667777777777666543333333333
No 322
>COG1288 Predicted membrane protein [Function unknown]
Probab=39.41 E-value=2.1e+02 Score=26.23 Aligned_cols=28 Identities=21% Similarity=0.261 Sum_probs=19.3
Q ss_pred CccccccccCchhHHHHHHHHHHHHHHH
Q 017535 2 APMTFMGIPGWRISFHIVGLISVVVGTL 29 (370)
Q Consensus 2 ~g~~~~~~~gWr~~f~i~~~~~~i~~~~ 29 (370)
+|-.+.+-.+||...|+...+..+..+.
T Consensus 208 AGip~~sG~~~Riv~~v~~~~~~i~y~~ 235 (481)
T COG1288 208 AGIPFLSGMGLRIVVWVVFTLISIIYVY 235 (481)
T ss_pred cCCcccccchHHHHHHHHHHHHHHHHHH
Confidence 4455667789999999887665554443
No 323
>cd02434 Nodulin-21_like_3 Nodulin-21 and CCC1-related protein family. Nodulin-21_like_3: This is a family of proteins closely related to nodulin-21, a plant nodule-specific protein that may be involved in symbiotic nitrogen fixation. This family is also related to CCC1, a yeast vacuole transmembrane protein that functions as an iron and manganese transporter.
Probab=37.50 E-value=2.3e+02 Score=23.27 Aligned_cols=21 Identities=10% Similarity=-0.156 Sum_probs=13.8
Q ss_pred HHHhHHHHHHHHHHHhhhCCC
Q 017535 120 SSLGGLFGGRMGDFLSARFPN 140 (370)
Q Consensus 120 ~~ig~~~~g~l~dr~~~~~~~ 140 (370)
..+.-.+.|++.-|+..++..
T Consensus 180 ~~~~L~~~G~~~~~~~~~~~~ 200 (225)
T cd02434 180 VAFTLFLLGSFKSKLYNGKWI 200 (225)
T ss_pred HHHHHHHHHHHHHHhcCCchH
Confidence 455566677777777666553
No 324
>COG5393 Predicted membrane protein [Function unknown]
Probab=36.07 E-value=1.6e+02 Score=21.08 Aligned_cols=22 Identities=9% Similarity=0.114 Sum_probs=10.1
Q ss_pred HHH-HHHHHHHHHHHHHHHHHHH
Q 017535 262 LAK-ALYTAIGIPMALCCFIYSF 283 (370)
Q Consensus 262 ~~~-~~~~~~~~~~~~~~~~~~~ 283 (370)
|++ +.....+++.+++.+...+
T Consensus 80 yRl~a~~a~~~vl~vl~~i~ciW 102 (131)
T COG5393 80 YRLNAMIATTAVLLVLALIGCIW 102 (131)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 555 4444444444444444443
No 325
>PF04341 DUF485: Protein of unknown function, DUF485; InterPro: IPR007436 This family includes several putative integral membrane proteins.
Probab=35.90 E-value=1.4e+02 Score=20.32 Aligned_cols=38 Identities=16% Similarity=0.087 Sum_probs=17.6
Q ss_pred HHHHHhhhhhhHHHH-HHHHHHH-HHhCCCHHHHHHHHHH
Q 017535 78 IVAQGVTGSFPWSAL-SFAAMWL-ELTGFSHEKTAFLMAL 115 (370)
Q Consensus 78 ~~~~~~~~~~~~~~~-~~~~~~~-~~~g~s~~~~~~~~~~ 115 (370)
+...++..+..+... .+.|.++ ....-.....|++.++
T Consensus 21 l~~i~l~~y~~~~ll~a~~p~~m~~~v~~G~~t~g~~~g~ 60 (91)
T PF04341_consen 21 LSAIFLVLYFGFVLLSAFAPELMATPVFPGSLTLGIVLGL 60 (91)
T ss_pred HHHHHHHHHHHHHHHHHHCHHHHcCcccCCCcCHHHHHHH
Confidence 333334344444333 6778887 4332123445554433
No 326
>PF11872 DUF3392: Protein of unknown function (DUF3392); InterPro: IPR021813 This family of proteins are functionally uncharacterised. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.
Probab=35.28 E-value=1.6e+02 Score=20.81 Aligned_cols=42 Identities=12% Similarity=0.095 Sum_probs=25.0
Q ss_pred HHhhhccchHH-HHHHHHHhhhhhhHHHH-HHHHHHH-HH-hCCCH
Q 017535 65 EAKSVIKIPSF-QIIVAQGVTGSFPWSAL-SFAAMWL-EL-TGFSH 106 (370)
Q Consensus 65 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~-~~-~g~s~ 106 (370)
-.|+.+++..| .....+...+.++|+.. .|..+++ +. ..++.
T Consensus 40 ~lrr~l~~~~Fi~Rt~~FIlicAFGYGll~v~~tP~l~~~L~~~~~ 85 (106)
T PF11872_consen 40 FLRRLLSGYHFILRTLAFILICAFGYGLLIVWLTPLLARQLAQLPN 85 (106)
T ss_pred HHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 34566666663 44555666667777776 5777776 43 34443
No 327
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=33.76 E-value=1.1e+02 Score=24.13 Aligned_cols=22 Identities=14% Similarity=0.366 Sum_probs=17.2
Q ss_pred HHHHHHHhHHHHHHHHHHHhhh
Q 017535 116 FVIASSLGGLFGGRMGDFLSAR 137 (370)
Q Consensus 116 ~~~~~~ig~~~~g~l~dr~~~~ 137 (370)
+-++..++..+.|++.||..++
T Consensus 91 yL~gfi~aa~l~G~l~~k~~~~ 112 (184)
T COG1268 91 YLIGFIIAAFLIGLLAEKIRKR 112 (184)
T ss_pred HHHHHHHHHHHHHHHHHhhhcc
Confidence 3557778889999999997763
No 328
>PF14068 YuiB: Putative membrane protein
Probab=32.67 E-value=1.7e+02 Score=20.34 Aligned_cols=24 Identities=17% Similarity=0.156 Sum_probs=18.0
Q ss_pred HHHHHHHHhHHHHHHHHHHHhhhC
Q 017535 115 LFVIASSLGGLFGGRMGDFLSARF 138 (370)
Q Consensus 115 ~~~~~~~ig~~~~g~l~dr~~~~~ 138 (370)
....++.+|++++|+..+.+.+|.
T Consensus 75 ~il~~Gl~GAi~SG~tIr~LRk~G 98 (102)
T PF14068_consen 75 LILSSGLAGAIVSGITIRTLRKKG 98 (102)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcc
Confidence 345678889999999888775553
No 329
>PF04226 Transgly_assoc: Transglycosylase associated protein; InterPro: IPR007341 This bacterial protein is predicted to be an integral membrane protein. Some family members have been annotated as transglycosylase-associated proteins, but no experimental evidence is provided. This family was annotated based on the information in P76011 from SWISSPROT.; GO: 0016021 integral to membrane
Probab=31.72 E-value=1.1e+02 Score=17.88 Aligned_cols=18 Identities=22% Similarity=0.451 Sum_probs=14.3
Q ss_pred HHHHhHHHHHHHHHHHhh
Q 017535 119 ASSLGGLFGGRMGDFLSA 136 (370)
Q Consensus 119 ~~~ig~~~~g~l~dr~~~ 136 (370)
.+++|+++++++...++.
T Consensus 3 ~GiiGa~vGg~l~~~lg~ 20 (48)
T PF04226_consen 3 LGIIGAFVGGWLFGLLGI 20 (48)
T ss_pred eehHHHHHHHHHHHHhcc
Confidence 457788888888888877
No 330
>PHA02692 hypothetical protein; Provisional
Probab=30.66 E-value=83 Score=20.10 Aligned_cols=10 Identities=30% Similarity=0.454 Sum_probs=5.8
Q ss_pred ccCchhHHHH
Q 017535 9 IPGWRISFHI 18 (370)
Q Consensus 9 ~~gWr~~f~i 18 (370)
..+|++.+++
T Consensus 42 ~~~~~~~ii~ 51 (70)
T PHA02692 42 GVPWTTVFLI 51 (70)
T ss_pred CcchHHHHHH
Confidence 3456666655
No 331
>PF12832 MFS_1_like: MFS_1 like family
Probab=30.64 E-value=1.6e+02 Score=19.26 Aligned_cols=31 Identities=23% Similarity=0.394 Sum_probs=25.8
Q ss_pred chhHHHHHHHHHHHHhhchhhHHHHHHHHhh
Q 017535 206 SRTSVYAMDRSFESILSSFAPPVVGILAQHV 236 (370)
Q Consensus 206 ~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 236 (370)
....-.|+...+..+...+++++.|.+.|..
T Consensus 32 l~~~~iGil~~i~~~~~~~~~pl~g~laDk~ 62 (77)
T PF12832_consen 32 LSPSQIGILSAIRPLIRFLAPPLWGFLADKF 62 (77)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456677777788888899999999999998
No 332
>PTZ00370 STEVOR; Provisional
Probab=29.49 E-value=1.5e+02 Score=25.30 Aligned_cols=19 Identities=16% Similarity=0.389 Sum_probs=10.7
Q ss_pred HHHHHHHHHHHhcCcccHH
Q 017535 275 ALCCFIYSFLYSTYPRDRE 293 (370)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~ 293 (370)
++..++++|++++.++.++
T Consensus 269 vvliilYiwlyrrRK~swk 287 (296)
T PTZ00370 269 VVLIILYIWLYRRRKNSWK 287 (296)
T ss_pred HHHHHHHHHHHHhhcchhH
Confidence 4445566666665555443
No 333
>PF15086 UPF0542: Uncharacterised protein family UPF0542
Probab=29.49 E-value=1.6e+02 Score=19.01 Aligned_cols=13 Identities=8% Similarity=-0.011 Sum_probs=5.7
Q ss_pred HHHHHHHHHHHhc
Q 017535 275 ALCCFIYSFLYST 287 (370)
Q Consensus 275 ~~~~~~~~~~~~~ 287 (370)
++++++.+-+.+.
T Consensus 35 iisa~lSwkLaK~ 47 (74)
T PF15086_consen 35 IISAVLSWKLAKA 47 (74)
T ss_pred HHHHHHHHHHHHH
Confidence 3444444444433
No 334
>PF06939 DUF1286: Protein of unknown function (DUF1286); InterPro: IPR009705 This entry is represented by Sulfolobus virus STSV1, Orf8. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several hypothetical archaeal proteins of around 120 residues in length. All members of this family seem to be Sulfolobus species specific. The function of this family is unknown.
Probab=28.70 E-value=1.8e+02 Score=20.64 Aligned_cols=15 Identities=20% Similarity=0.284 Sum_probs=11.0
Q ss_pred HhHHHHHHHHHHHhh
Q 017535 122 LGGLFGGRMGDFLSA 136 (370)
Q Consensus 122 ig~~~~g~l~dr~~~ 136 (370)
+-++++..+.||+|.
T Consensus 34 iiSvl~N~lID~lGH 48 (114)
T PF06939_consen 34 IISVLGNTLIDRLGH 48 (114)
T ss_pred HHHHHHHHHHHhccc
Confidence 345667788899987
No 335
>PF15048 OSTbeta: Organic solute transporter subunit beta protein
Probab=27.90 E-value=48 Score=23.98 Aligned_cols=24 Identities=8% Similarity=0.209 Sum_probs=13.7
Q ss_pred hhhHhHHHHHHHHHHHHHHHHHHH
Q 017535 257 ANAASLAKALYTAIGIPMALCCFI 280 (370)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~ 280 (370)
.++..|.++++.+.++.+++++++
T Consensus 30 ED~tpWNysiL~Ls~vvlvi~~~L 53 (125)
T PF15048_consen 30 EDATPWNYSILALSFVVLVISFFL 53 (125)
T ss_pred CCCCCcchHHHHHHHHHHHHHHHH
Confidence 345568888876655444444333
No 336
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=26.50 E-value=22 Score=30.86 Aligned_cols=22 Identities=14% Similarity=0.007 Sum_probs=0.0
Q ss_pred HHHHHhcCCCCccchhccccCCCc
Q 017535 183 GLFISWNAPATNNPIFAEIVPEKS 206 (370)
Q Consensus 183 g~~~~~~~~~~~~~~~~~~~~~~~ 206 (370)
|++.+.... ..+++.+. +|++.
T Consensus 8 ~~~~~~~q~-s~~glas~-~p~~y 29 (309)
T PF01733_consen 8 GFANAVLQS-SLFGLASL-FPPKY 29 (309)
T ss_dssp ------------------------
T ss_pred HhhhHHHhc-cHHHHHhc-CCHHH
Confidence 333343333 33444443 66654
No 337
>cd02433 Nodulin-21_like_2 Nodulin-21 and CCC1-related protein family. Nodulin-21_like_2: This is a family of proteins closely related to nodulin-21, a plant nodule-specific protein that may be involved in symbiotic nitrogen fixation. This family is also related to CCC1, a yeast vacuole transmembrane protein that functions as an iron and manganese transporter.
Probab=26.31 E-value=3.8e+02 Score=22.24 Aligned_cols=21 Identities=33% Similarity=0.377 Sum_probs=11.7
Q ss_pred HHHHhHHHHHHHHHHHhhhCC
Q 017535 119 ASSLGGLFGGRMGDFLSARFP 139 (370)
Q Consensus 119 ~~~ig~~~~g~l~dr~~~~~~ 139 (370)
...+...+.|++.-|++.+..
T Consensus 188 ~~~~~L~~lG~~~a~~s~~~~ 208 (234)
T cd02433 188 LVGLALLATGAVTGLLSGRSP 208 (234)
T ss_pred HHHHHHHHHHHHHHhhCCCcH
Confidence 344444556666666665544
No 338
>PF01405 PsbT: Photosystem II reaction centre T protein; InterPro: IPR001743 Oxygenic photosynthesis uses two multi-subunit photosystems (I and II) located in the cell membranes of cyanobacteria and in the thylakoid membranes of chloroplasts in plants and algae. Photosystem II (PSII) has a P680 reaction centre containing chlorophyll 'a' that uses light energy to carry out the oxidation (splitting) of water molecules, and to produce ATP via a proton pump. Photosystem I (PSI) has a P700 reaction centre containing chlorophyll that takes the electron and associated hydrogen donated from PSII to reduce NADP+ to NADPH. Both ATP and NADPH are subsequently used in the light-independent reactions to convert carbon dioxide to glucose using the hydrogen atom extracted from water by PSII, releasing oxygen as a by-product. PSII is a multisubunit protein-pigment complex containing polypeptides both intrinsic and extrinsic to the photosynthetic membrane [, ]. Within the core of the complex, the chlorophyll and beta-carotene pigments are mainly bound to the antenna proteins CP43 (PsbC) and CP47 (PsbB), which pass the excitation energy on to the reaction centre proteins D1 (Qb, PsbA) and D2 (Qa, PsbD) that bind all the redox-active cofactors involved in the energy conversion process. The PSII oxygen-evolving complex (OEC) oxidises water to provide protons for use by PSI, and consists of OEE1 (PsbO), OEE2 (PsbP) and OEE3 (PsbQ). The remaining subunits in PSII are of low molecular weight (less than 10 kDa), and are involved in PSII assembly, stabilisation, dimerisation, and photo-protection []. This family represents the low molecular weight transmembrane protein PsbT found in PSII, which is thought to be associated with the D1 (PsbA) - D2 (PsbD) heterodimer. PsbT may be involved in the formation and/or stabilisation of dimeric PSII complexes, because in the absence of this protein dimeric PSII complexes were found to be less abundant. Furthermore, although PsbT does not confer photo-protection, it is required for the efficient recovery of photo-damaged PSII [].; GO: 0015979 photosynthesis, 0009523 photosystem II, 0009539 photosystem II reaction center, 0016020 membrane; PDB: 3BZ1_T 1S5L_t 2AXT_t 3KZI_T 3PRQ_T 3BZ2_T 3PRR_T 4FBY_g 3A0H_t 3A0B_T ....
Probab=25.92 E-value=1.1e+02 Score=15.77 Aligned_cols=8 Identities=25% Similarity=0.575 Sum_probs=2.2
Q ss_pred HhcCCCCC
Q 017535 32 LFANDPHF 39 (370)
Q Consensus 32 ~~~~~~~~ 39 (370)
.+.|||++
T Consensus 21 I~FRePPr 28 (29)
T PF01405_consen 21 IFFREPPR 28 (29)
T ss_dssp HHSS----
T ss_pred hhccCCCC
Confidence 44577653
No 339
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=25.76 E-value=68 Score=22.58 Aligned_cols=32 Identities=13% Similarity=-0.024 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhC
Q 017535 107 EKTAFLMALFVIASSLGGLFGGRMGDFLSARF 138 (370)
Q Consensus 107 ~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~ 138 (370)
...|-.+..++-..++.+++.++..|+....+
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~ 85 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGVRPDR 85 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCcCCCh
Confidence 45677788888888999999999999865443
No 340
>PRK02237 hypothetical protein; Provisional
Probab=25.71 E-value=1.2e+02 Score=21.43 Aligned_cols=32 Identities=13% Similarity=-0.101 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhC
Q 017535 107 EKTAFLMALFVIASSLGGLFGGRMGDFLSARF 138 (370)
Q Consensus 107 ~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~ 138 (370)
...|-.+..++-..++.+++.++..|+...-+
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~ 87 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDR 87 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCcCCCh
Confidence 34778888888889999999999999864443
No 341
>PF12597 DUF3767: Protein of unknown function (DUF3767); InterPro: IPR022533 This group of proteins includes mitochodrial cytochrome c oxidase proteins [], and some transmembrane domain-containing proteins of unknown function known as FAM36A. Proteins in this family are typically between 112 and 199 amino acids in length.
Probab=25.15 E-value=2.4e+02 Score=20.46 Aligned_cols=11 Identities=0% Similarity=-0.236 Sum_probs=4.2
Q ss_pred HHHHHHHHHHH
Q 017535 275 ALCCFIYSFLY 285 (370)
Q Consensus 275 ~~~~~~~~~~~ 285 (370)
+.++..+....
T Consensus 78 l~s~~~we~Cr 88 (118)
T PF12597_consen 78 LGSLGSWEYCR 88 (118)
T ss_pred HHHHHHHHHHH
Confidence 33333333333
No 342
>PHA03054 IMV membrane protein; Provisional
Probab=25.15 E-value=1.4e+02 Score=19.14 Aligned_cols=17 Identities=18% Similarity=0.333 Sum_probs=8.6
Q ss_pred CchhHHHHHHHHHHHHH
Q 017535 11 GWRISFHIVGLISVVVG 27 (370)
Q Consensus 11 gWr~~f~i~~~~~~i~~ 27 (370)
+|.|..++..++.+++.
T Consensus 45 ~~~~~~~ii~l~~v~~~ 61 (72)
T PHA03054 45 CWGWYWLIIIFFIVLIL 61 (72)
T ss_pred CchHHHHHHHHHHHHHH
Confidence 55555555554444433
No 343
>PHA02844 putative transmembrane protein; Provisional
Probab=24.87 E-value=1.4e+02 Score=19.41 Aligned_cols=17 Identities=24% Similarity=0.251 Sum_probs=8.2
Q ss_pred CchhHHHHHHHHHHHHH
Q 017535 11 GWRISFHIVGLISVVVG 27 (370)
Q Consensus 11 gWr~~f~i~~~~~~i~~ 27 (370)
+|.|..+++.++.+++.
T Consensus 45 ~~~~~~~ii~i~~v~~~ 61 (75)
T PHA02844 45 SSSTKIWILTIIFVVFA 61 (75)
T ss_pred ChhHHHHHHHHHHHHHH
Confidence 45555555544444433
No 344
>PRK03612 spermidine synthase; Provisional
Probab=24.60 E-value=6.1e+02 Score=24.08 Aligned_cols=28 Identities=4% Similarity=-0.020 Sum_probs=12.6
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHh
Q 017535 108 KTAFLMALFVIASSLGGLFGGRMGDFLS 135 (370)
Q Consensus 108 ~~~~~~~~~~~~~~ig~~~~g~l~dr~~ 135 (370)
..+.++..+++++.++..+......++.
T Consensus 55 ii~~fl~glalGs~l~~~~~~~~~~~~~ 82 (521)
T PRK03612 55 VIGLMLFAMGVGALLSKYLLRDAAAGFV 82 (521)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhHHHHHH
Confidence 3444444445555444444444444443
No 345
>PHA02819 hypothetical protein; Provisional
Probab=24.52 E-value=1.4e+02 Score=19.09 Aligned_cols=17 Identities=24% Similarity=0.516 Sum_probs=8.5
Q ss_pred CchhHHHHHHHHHHHHH
Q 017535 11 GWRISFHIVGLISVVVG 27 (370)
Q Consensus 11 gWr~~f~i~~~~~~i~~ 27 (370)
+|.|..++..++.+++.
T Consensus 43 ~~~~~~~ii~l~~~~~~ 59 (71)
T PHA02819 43 SFLRYYLIIGLVTIVFV 59 (71)
T ss_pred ChhHHHHHHHHHHHHHH
Confidence 55555555554444433
No 346
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=24.49 E-value=3.2e+02 Score=23.04 Aligned_cols=18 Identities=22% Similarity=0.456 Sum_probs=9.4
Q ss_pred HHHHHHHHHHHHHHhcCC
Q 017535 19 VGLISVVVGTLVRLFAND 36 (370)
Q Consensus 19 ~~~~~~i~~~~~~~~~~~ 36 (370)
.|+..+++....+.+++.
T Consensus 120 ~G~~l~~~~~~~f~fik~ 137 (254)
T PF07857_consen 120 IGVALVLVSGIIFSFIKS 137 (254)
T ss_pred HHHHHHHHHHHheeeecC
Confidence 444445555555555554
No 347
>TIGR00801 ncs2 uracil-xanthine permease. NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39).
Probab=24.47 E-value=5.5e+02 Score=23.48 Aligned_cols=40 Identities=18% Similarity=0.248 Sum_probs=31.3
Q ss_pred HHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 017535 93 SFAAMWL-ELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDF 133 (370)
Q Consensus 93 ~~~~~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr 133 (370)
...|... ... +++.+...+.....+.+.+++++-+....+
T Consensus 23 i~~p~iv~~~~-l~~~~~~~li~at~~~sgi~Tllq~~~~~~ 63 (415)
T TIGR00801 23 VLVPLLVGLAP-LSAEQTQYLVSISLLTSGIGTLLQLFRTGG 63 (415)
T ss_pred HHHHHHHhccc-CCHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Confidence 3446666 667 999999998888888889999988876654
No 348
>cd02435 CCC1 CCC1. CCC1: This domain is present in the CCC1, an iron and manganese transporter of Saccharomyces cerevisiae. CCC1 is a transmembrane protein that is located in the vacuole and transfers the iron and manganese ions from the cytosol to the vacuole. This domain may be unique to certain fungi and plants.
Probab=23.19 E-value=4.4e+02 Score=21.96 Aligned_cols=21 Identities=5% Similarity=0.132 Sum_probs=12.1
Q ss_pred HHHHhHHHHHHHHHHHhhhCC
Q 017535 119 ASSLGGLFGGRMGDFLSARFP 139 (370)
Q Consensus 119 ~~~ig~~~~g~l~dr~~~~~~ 139 (370)
...+.-.+.|.+..|+.++..
T Consensus 191 l~~~aL~ilG~~~s~~s~~~~ 211 (241)
T cd02435 191 VTLVALFVFGYVKTWFTGGWG 211 (241)
T ss_pred HHHHHHHHHHHHHHhhcCCCc
Confidence 444445566777777765533
No 349
>COG2836 Uncharacterized conserved protein [Function unknown]
Probab=22.87 E-value=4.4e+02 Score=21.74 Aligned_cols=34 Identities=24% Similarity=0.070 Sum_probs=27.1
Q ss_pred CCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhh
Q 017535 103 GFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSA 136 (370)
Q Consensus 103 g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~ 136 (370)
--|+.+-++.+..++++.....+..|..++++..
T Consensus 160 tgS~~~Gal~mlaFGlGTlP~ll~~G~~s~~~s~ 193 (232)
T COG2836 160 TGSAFEGALVMLAFGLGTLPNLLAMGIFSSKLSK 193 (232)
T ss_pred cCCHHHHHHHHHHHhhcccHHHHHHHHHHHHHHH
Confidence 3477788888888888888888888888888653
No 350
>PHA02975 hypothetical protein; Provisional
Probab=22.34 E-value=1.7e+02 Score=18.63 Aligned_cols=17 Identities=12% Similarity=-0.097 Sum_probs=7.8
Q ss_pred CchhHHHHHHHHHHHHH
Q 017535 11 GWRISFHIVGLISVVVG 27 (370)
Q Consensus 11 gWr~~f~i~~~~~~i~~ 27 (370)
+|.|..++..++.+++.
T Consensus 41 ~~~~~~~ii~i~~v~~~ 57 (69)
T PHA02975 41 SSLSIILIIFIIFITCI 57 (69)
T ss_pred CchHHHHHHHHHHHHHH
Confidence 44455454444444333
No 351
>CHL00031 psbT photosystem II protein T
Probab=21.99 E-value=1.4e+02 Score=15.81 Aligned_cols=9 Identities=22% Similarity=0.442 Sum_probs=5.2
Q ss_pred HhcCCCCCC
Q 017535 32 LFANDPHFP 40 (370)
Q Consensus 32 ~~~~~~~~~ 40 (370)
.+.|||++-
T Consensus 21 I~FRePPri 29 (33)
T CHL00031 21 IFFREPPKV 29 (33)
T ss_pred heecCCCCC
Confidence 445886553
No 352
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=21.39 E-value=3.7e+02 Score=20.38 Aligned_cols=21 Identities=19% Similarity=0.298 Sum_probs=14.0
Q ss_pred HHHHHHhHHHHHHHHHHHhhh
Q 017535 117 VIASSLGGLFGGRMGDFLSAR 137 (370)
Q Consensus 117 ~~~~~ig~~~~g~l~dr~~~~ 137 (370)
-++..++..+.|++.+|..++
T Consensus 63 l~gf~~~a~i~g~~~~~~~~~ 83 (148)
T PF02632_consen 63 LLGFPLAALIIGLLAERLKRS 83 (148)
T ss_pred HHHHHHHHHHHHHHHHhcccc
Confidence 456666677777777776554
No 353
>PF11511 RhodobacterPufX: Intrinsic membrane protein PufX; InterPro: IPR020169 PufX organises RC-LH1, the photosynthesis reaction centre-light harvesting complex 1 core complex of Rhodobacter sphaeroides []. It also facilitates the exchange of quinol for quinone between the reaction centre and cytochrome bc(1) complexes. In organic solvent, PufX contains two hydrophobic helices which are flanked by unstructured regions and connected by a helical bend [].; PDB: 2DW3_A 2ITA_A 2NRG_A.
Probab=21.26 E-value=2.1e+02 Score=18.22 Aligned_cols=26 Identities=15% Similarity=0.235 Sum_probs=11.9
Q ss_pred CchhHHHHHHHHHHHHHHHHHHhcCC
Q 017535 11 GWRISFHIVGLISVVVGTLVRLFAND 36 (370)
Q Consensus 11 gWr~~f~i~~~~~~i~~~~~~~~~~~ 36 (370)
||-.+|.+...+.++..-++=.++||
T Consensus 29 g~Aav~~~~~~~~l~~~~~iG~~LPe 54 (67)
T PF11511_consen 29 GYAAVFFLGLWFLLVALYFIGLLLPE 54 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSSTT
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhCch
Confidence 45555555444433333333344565
No 354
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=21.03 E-value=6e+02 Score=22.67 Aligned_cols=60 Identities=8% Similarity=0.045 Sum_probs=30.9
Q ss_pred HHHHHHHHhhhhhhHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhCC
Q 017535 75 FQIIVAQGVTGSFPWSALSFAAMWLELTGFSHEKTAFLMALFVIASSLGGLFGGRMGDFLSARFP 139 (370)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~ 139 (370)
++.+...++..+..|.....+...... ++.....+. ....-+..+++.+.+..++|-|..
T Consensus 31 v~i~s~~fl~~f~a~~gl~nlq~~vn~-~lg~~sl~~----~y~~l~~s~m~~~~~Ir~~g~K~t 90 (390)
T KOG3097|consen 31 VLILSIAFLLTFTAYLGLQNLQTSVNY-DLGTVSLGA----LYLSLIDSSMFMPLLIRFLGTKWT 90 (390)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhc-Ccccchhhh----hhHHHHHHHHHHHHHHHHHhhHHH
Confidence 445555555555555444344444321 222222222 244455556666688888988865
No 355
>PHA03237 envelope glycoprotein M; Provisional
Probab=20.72 E-value=6.4e+02 Score=23.15 Aligned_cols=10 Identities=0% Similarity=-0.114 Sum_probs=4.6
Q ss_pred hhHHHHHHHH
Q 017535 207 RTSVYAMDRS 216 (370)
Q Consensus 207 ~g~~~~~~~~ 216 (370)
-|...|....
T Consensus 289 ~G~~lG~lia 298 (424)
T PHA03237 289 PGPALGLLIA 298 (424)
T ss_pred ccchHHHHHH
Confidence 4444444433
No 356
>PHA02650 hypothetical protein; Provisional
Probab=20.02 E-value=2e+02 Score=18.98 Aligned_cols=12 Identities=8% Similarity=-0.111 Sum_probs=5.2
Q ss_pred CchhHHHHHHHH
Q 017535 11 GWRISFHIVGLI 22 (370)
Q Consensus 11 gWr~~f~i~~~~ 22 (370)
+|.|..+++.++
T Consensus 46 ~~~~~~~ii~i~ 57 (81)
T PHA02650 46 WFNGQNFIFLIF 57 (81)
T ss_pred CchHHHHHHHHH
Confidence 444444444443
Done!