Query 017536
Match_columns 369
No_of_seqs 526 out of 3539
Neff 9.7
Searched_HMMs 29240
Date Mon Mar 25 16:00:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017536.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017536hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3kh5_A Protein MJ1225; AMPK, A 100.0 2.1E-33 7E-38 252.5 18.4 223 1-264 30-278 (280)
2 3ddj_A CBS domain-containing p 100.0 2.7E-33 9.2E-38 254.0 15.6 226 1-269 46-287 (296)
3 3t4n_C Nuclear protein SNF4; C 100.0 2.5E-31 8.7E-36 244.0 19.6 231 1-268 58-321 (323)
4 2yzq_A Putative uncharacterize 100.0 4.7E-31 1.6E-35 237.4 16.9 219 1-265 27-277 (282)
5 2qrd_G Protein C1556.08C; AMPK 100.0 2E-29 6.9E-34 232.4 20.9 232 1-269 50-317 (334)
6 2v8q_E 5'-AMP-activated protei 100.0 6.6E-29 2.2E-33 228.6 20.7 235 1-268 63-324 (330)
7 3ddj_A CBS domain-containing p 100.0 6.1E-29 2.1E-33 225.3 16.0 199 35-266 14-213 (296)
8 3kh5_A Protein MJ1225; AMPK, A 100.0 4.6E-27 1.6E-31 211.0 19.2 194 44-265 7-203 (280)
9 2yzq_A Putative uncharacterize 99.9 9.7E-27 3.3E-31 209.2 14.1 178 41-263 1-180 (282)
10 3t4n_C Nuclear protein SNF4; C 99.9 7.6E-25 2.6E-29 200.8 18.5 205 39-266 28-247 (323)
11 2v8q_E 5'-AMP-activated protei 99.9 3.8E-24 1.3E-28 196.8 18.6 203 39-265 33-249 (330)
12 2qrd_G Protein C1556.08C; AMPK 99.9 1.3E-23 4.5E-28 193.4 18.6 207 40-266 21-242 (334)
13 3k6e_A CBS domain protein; str 99.9 1.8E-22 6.1E-27 164.9 13.6 130 141-272 14-147 (156)
14 3hf7_A Uncharacterized CBS-dom 99.9 2.9E-22 9.9E-27 158.6 10.7 126 142-269 2-129 (130)
15 3lhh_A CBS domain protein; str 99.9 1E-21 3.5E-26 163.3 13.4 130 139-273 39-170 (172)
16 3lfr_A Putative metal ION tran 99.9 2.2E-22 7.5E-27 160.6 8.4 130 142-274 3-134 (136)
17 3lv9_A Putative transporter; C 99.9 1.9E-21 6.4E-26 157.5 14.0 126 139-269 20-147 (148)
18 3i8n_A Uncharacterized protein 99.9 1.1E-21 3.7E-26 155.3 10.8 125 139-267 3-129 (130)
19 3jtf_A Magnesium and cobalt ef 99.9 2.1E-21 7.2E-26 153.4 11.2 123 141-269 4-128 (129)
20 3oco_A Hemolysin-like protein 99.9 2.2E-21 7.6E-26 158.0 11.2 131 139-274 17-150 (153)
21 3ocm_A Putative membrane prote 99.9 5.3E-21 1.8E-25 158.9 13.6 132 138-275 32-165 (173)
22 3nqr_A Magnesium and cobalt ef 99.8 2.4E-21 8.1E-26 152.7 9.3 122 142-267 3-126 (127)
23 4esy_A CBS domain containing m 99.8 1.7E-21 5.8E-26 161.6 7.6 128 136-267 12-162 (170)
24 4esy_A CBS domain containing m 99.8 2.5E-21 8.5E-26 160.6 8.0 143 38-197 15-158 (170)
25 2ef7_A Hypothetical protein ST 99.8 1.2E-19 4.2E-24 143.8 15.8 125 141-269 3-127 (133)
26 3gby_A Uncharacterized protein 99.8 5.4E-20 1.8E-24 145.0 11.8 123 141-267 4-126 (128)
27 2rc3_A CBS domain; in SITU pro 99.8 7.1E-20 2.4E-24 145.7 12.2 124 143-267 7-131 (135)
28 3ctu_A CBS domain protein; str 99.8 8.7E-20 3E-24 148.9 12.6 132 139-272 12-147 (156)
29 3fv6_A YQZB protein; CBS domai 99.8 4.2E-19 1.4E-23 145.4 16.1 134 134-271 9-148 (159)
30 3l2b_A Probable manganase-depe 99.8 2.4E-19 8.2E-24 157.6 15.4 218 40-264 6-241 (245)
31 3fhm_A Uncharacterized protein 99.8 5.3E-20 1.8E-24 151.8 10.1 132 138-270 20-153 (165)
32 1pbj_A Hypothetical protein; s 99.8 1.8E-19 6.3E-24 141.1 12.7 120 143-266 2-121 (125)
33 2yzi_A Hypothetical protein PH 99.8 2.3E-19 7.9E-24 143.2 13.5 129 139-271 4-133 (138)
34 3lqn_A CBS domain protein; csg 99.8 1.2E-19 4E-24 147.2 11.9 129 139-270 12-146 (150)
35 3kpb_A Uncharacterized protein 99.8 2.2E-19 7.4E-24 140.1 12.8 117 143-266 2-119 (122)
36 4fry_A Putative signal-transdu 99.8 9.8E-20 3.3E-24 148.8 11.2 131 142-273 7-141 (157)
37 2rih_A Conserved protein with 99.8 3.7E-19 1.3E-23 142.6 14.3 120 142-266 5-127 (141)
38 3oi8_A Uncharacterized protein 99.8 5.9E-20 2E-24 150.0 8.8 120 138-262 34-155 (156)
39 2p9m_A Hypothetical protein MJ 99.8 3.8E-19 1.3E-23 141.9 13.3 125 139-267 5-136 (138)
40 3k2v_A Putative D-arabinose 5- 99.8 2.1E-19 7.2E-24 145.5 11.5 121 141-263 27-148 (149)
41 3lv9_A Putative transporter; C 99.8 1.3E-18 4.6E-23 140.6 15.2 136 20-200 4-144 (148)
42 4gqw_A CBS domain-containing p 99.8 2.2E-19 7.6E-24 145.6 10.5 128 141-269 4-145 (152)
43 2emq_A Hypothetical conserved 99.8 1E-18 3.5E-23 142.6 13.4 130 139-271 8-143 (157)
44 1y5h_A Hypothetical protein RV 99.8 1.4E-19 4.9E-24 143.5 8.0 121 142-265 8-129 (133)
45 3sl7_A CBS domain-containing p 99.8 6.5E-19 2.2E-23 147.1 12.0 130 142-271 4-160 (180)
46 3kxr_A Magnesium transporter, 99.8 2.7E-18 9.2E-23 146.4 15.9 123 139-270 51-177 (205)
47 2o16_A Acetoin utilization pro 99.8 1.1E-18 3.8E-23 143.0 12.7 126 141-269 4-137 (160)
48 2nyc_A Nuclear protein SNF4; b 99.8 1.3E-18 4.5E-23 139.7 12.7 124 141-267 7-141 (144)
49 1o50_A CBS domain-containing p 99.8 2.7E-18 9.3E-23 140.2 14.3 124 143-269 17-155 (157)
50 1yav_A Hypothetical protein BS 99.8 1.3E-18 4.5E-23 142.4 12.1 130 139-271 11-146 (159)
51 1pvm_A Conserved hypothetical 99.8 1.8E-18 6.1E-23 145.2 12.2 124 141-266 8-132 (184)
52 1vr9_A CBS domain protein/ACT 99.8 1.8E-18 6E-23 148.7 12.0 161 40-251 12-175 (213)
53 3lhh_A CBS domain protein; str 99.8 5.7E-18 1.9E-22 140.5 14.3 141 16-201 19-164 (172)
54 2uv4_A 5'-AMP-activated protei 99.8 7.7E-18 2.6E-22 136.7 14.3 119 143-266 24-150 (152)
55 2j9l_A Chloride channel protei 99.8 6.1E-18 2.1E-22 141.9 12.4 132 138-270 7-168 (185)
56 3i8n_A Uncharacterized protein 99.8 5.1E-18 1.7E-22 134.0 11.2 121 38-200 3-128 (130)
57 3fhm_A Uncharacterized protein 99.7 2.1E-17 7E-22 136.1 13.0 128 36-202 19-150 (165)
58 3kpb_A Uncharacterized protein 99.7 2.1E-17 7.1E-22 128.8 12.3 116 41-200 1-118 (122)
59 2pfi_A Chloride channel protei 99.7 2.2E-17 7.6E-22 135.6 12.8 128 139-270 10-150 (164)
60 1pbj_A Hypothetical protein; s 99.7 4.1E-17 1.4E-21 127.6 13.6 120 41-200 1-120 (125)
61 3k6e_A CBS domain protein; str 99.7 1.7E-17 6E-22 135.1 11.5 123 40-199 14-140 (156)
62 3nqr_A Magnesium and cobalt ef 99.7 3.9E-18 1.3E-22 134.1 7.3 117 40-198 2-123 (127)
63 3jtf_A Magnesium and cobalt ef 99.7 1.4E-17 4.9E-22 131.2 10.6 118 39-200 3-125 (129)
64 3gby_A Uncharacterized protein 99.7 8.7E-18 3E-22 132.2 9.2 122 39-201 3-125 (128)
65 3ocm_A Putative membrane prote 99.7 4.8E-17 1.7E-21 134.9 13.8 139 17-201 14-157 (173)
66 2ef7_A Hypothetical protein ST 99.7 4.6E-17 1.6E-21 128.9 13.1 121 39-199 2-123 (133)
67 4fry_A Putative signal-transdu 99.7 4.1E-17 1.4E-21 133.1 12.9 138 41-217 7-150 (157)
68 2o16_A Acetoin utilization pro 99.7 8.5E-17 2.9E-21 131.7 14.5 128 40-198 4-132 (160)
69 3hf7_A Uncharacterized CBS-dom 99.7 5.1E-17 1.7E-21 128.2 12.6 120 41-200 2-126 (130)
70 1vr9_A CBS domain protein/ACT 99.7 7.2E-17 2.5E-21 138.6 14.4 118 141-267 12-130 (213)
71 3oco_A Hemolysin-like protein 99.7 3.9E-17 1.3E-21 132.7 11.7 122 37-201 16-143 (153)
72 3fv6_A YQZB protein; CBS domai 99.7 1.1E-16 3.8E-21 130.9 14.3 124 38-199 14-142 (159)
73 2yvy_A MGTE, Mg2+ transporter 99.7 6E-17 2.1E-21 144.9 13.5 122 139-269 132-259 (278)
74 2rc3_A CBS domain; in SITU pro 99.7 8.8E-17 3E-21 127.6 12.5 120 42-199 7-129 (135)
75 2oux_A Magnesium transporter; 99.7 7.3E-17 2.5E-21 144.7 13.1 121 140-269 135-261 (286)
76 1o50_A CBS domain-containing p 99.7 1.3E-16 4.3E-21 130.3 13.0 140 35-199 10-151 (157)
77 2yzi_A Hypothetical protein PH 99.7 1.4E-16 4.9E-21 126.9 12.8 125 37-202 3-129 (138)
78 3lfr_A Putative metal ION tran 99.7 2.5E-17 8.5E-22 131.1 8.1 118 40-198 2-124 (136)
79 3kxr_A Magnesium transporter, 99.7 1.1E-16 3.7E-21 136.4 12.5 119 36-199 49-172 (205)
80 3k2v_A Putative D-arabinose 5- 99.7 1.7E-16 5.8E-21 128.3 12.9 117 41-196 28-147 (149)
81 3oi8_A Uncharacterized protein 99.7 8.3E-18 2.8E-22 137.2 4.8 118 36-196 33-155 (156)
82 2rih_A Conserved protein with 99.7 4.4E-16 1.5E-20 124.5 14.6 116 40-196 4-123 (141)
83 2pfi_A Chloride channel protei 99.7 3.2E-16 1.1E-20 128.6 13.4 131 37-200 9-146 (164)
84 4gqw_A CBS domain-containing p 99.7 2.1E-16 7.1E-21 127.9 11.6 135 40-200 4-142 (152)
85 2p9m_A Hypothetical protein MJ 99.7 3.3E-16 1.1E-20 124.7 12.3 121 38-198 5-133 (138)
86 3lqn_A CBS domain protein; csg 99.7 2E-16 6.9E-21 127.9 11.0 127 38-200 12-142 (150)
87 2d4z_A Chloride channel protei 99.7 3.4E-16 1.2E-20 136.7 12.2 126 140-268 11-247 (250)
88 2d4z_A Chloride channel protei 99.7 2.3E-15 7.9E-20 131.5 17.2 161 37-201 9-245 (250)
89 2j9l_A Chloride channel protei 99.7 6.6E-16 2.3E-20 129.4 13.1 148 38-200 8-164 (185)
90 2nyc_A Nuclear protein SNF4; b 99.7 5.4E-16 1.8E-20 124.3 11.8 126 39-200 6-140 (144)
91 3sl7_A CBS domain-containing p 99.7 2.6E-16 9E-21 131.2 9.8 149 40-200 3-155 (180)
92 1y5h_A Hypothetical protein RV 99.7 3.2E-16 1.1E-20 124.0 9.9 119 40-196 7-126 (133)
93 2emq_A Hypothetical conserved 99.7 1.1E-15 3.9E-20 124.4 13.4 128 37-200 7-138 (157)
94 3ctu_A CBS domain protein; str 99.7 9.1E-16 3.1E-20 124.9 12.6 126 38-200 12-141 (156)
95 2zy9_A Mg2+ transporter MGTE; 99.6 1.1E-15 3.9E-20 146.1 13.8 120 140-268 153-278 (473)
96 1pvm_A Conserved hypothetical 99.6 9.8E-16 3.3E-20 128.4 11.7 119 40-196 8-128 (184)
97 2uv4_A 5'-AMP-activated protei 99.6 1.2E-15 4.1E-20 123.7 11.2 123 37-197 19-147 (152)
98 3org_A CMCLC; transporter, tra 99.6 9.7E-17 3.3E-21 158.9 5.3 123 140-264 451-622 (632)
99 3pc3_A CG1753, isoform A; CBS, 99.6 7.6E-16 2.6E-20 149.7 11.2 124 141-269 383-513 (527)
100 1yav_A Hypothetical protein BS 99.6 1.2E-15 4.1E-20 124.6 10.6 128 37-200 10-141 (159)
101 2oux_A Magnesium transporter; 99.6 2E-15 6.9E-20 135.3 11.3 121 34-199 130-257 (286)
102 3usb_A Inosine-5'-monophosphat 99.6 2.9E-15 9.9E-20 144.1 11.9 116 144-267 115-234 (511)
103 2yvy_A MGTE, Mg2+ transporter 99.6 5.3E-15 1.8E-19 132.2 12.0 116 37-197 131-253 (278)
104 4af0_A Inosine-5'-monophosphat 99.6 6E-17 2.1E-21 151.5 -2.7 135 122-265 117-256 (556)
105 4fxs_A Inosine-5'-monophosphat 99.6 7.7E-16 2.6E-20 147.6 3.7 115 143-265 90-207 (496)
106 2zy9_A Mg2+ transporter MGTE; 99.5 6.7E-14 2.3E-18 133.9 12.6 119 36-199 150-275 (473)
107 3pc3_A CG1753, isoform A; CBS, 99.5 4.6E-14 1.6E-18 137.2 11.0 123 38-202 381-511 (527)
108 4avf_A Inosine-5'-monophosphat 99.5 8.8E-16 3E-20 147.0 -1.1 115 143-265 89-205 (490)
109 1zfj_A Inosine monophosphate d 99.5 1.4E-13 4.7E-18 132.9 13.9 115 144-266 92-210 (491)
110 1me8_A Inosine-5'-monophosphat 99.5 9.3E-16 3.2E-20 147.7 -1.9 116 146-268 100-222 (503)
111 3l2b_A Probable manganase-depe 99.5 1.6E-13 5.4E-18 120.3 12.1 167 1-196 33-239 (245)
112 3usb_A Inosine-5'-monophosphat 99.5 1E-13 3.6E-18 133.3 11.6 160 42-250 114-279 (511)
113 1me8_A Inosine-5'-monophosphat 99.5 4.1E-15 1.4E-19 143.2 0.7 165 42-252 97-267 (503)
114 3org_A CMCLC; transporter, tra 99.5 6.5E-14 2.2E-18 138.7 8.8 156 39-196 451-620 (632)
115 3ghd_A A cystathionine beta-sy 99.5 2E-13 6.8E-18 94.5 8.6 69 154-222 2-70 (70)
116 1vrd_A Inosine-5'-monophosphat 99.4 1.3E-14 4.3E-19 140.1 0.3 117 144-268 97-216 (494)
117 4fxs_A Inosine-5'-monophosphat 99.4 1.5E-13 5.1E-18 131.7 4.2 113 42-196 90-204 (496)
118 4avf_A Inosine-5'-monophosphat 99.4 2.6E-13 8.9E-18 129.9 4.8 115 41-197 88-203 (490)
119 2cu0_A Inosine-5'-monophosphat 99.4 6.1E-14 2.1E-18 134.7 0.2 112 144-265 95-206 (486)
120 1vrd_A Inosine-5'-monophosphat 99.3 5.7E-13 1.9E-17 128.5 4.9 115 42-198 96-212 (494)
121 1zfj_A Inosine monophosphate d 99.3 3.4E-11 1.2E-15 116.1 16.0 116 42-201 91-210 (491)
122 1jcn_A Inosine monophosphate d 99.3 6E-14 2.1E-18 135.9 -4.4 117 143-265 109-231 (514)
123 4af0_A Inosine-5'-monophosphat 99.2 3.4E-12 1.1E-16 119.7 3.1 108 44-196 141-253 (556)
124 2cu0_A Inosine-5'-monophosphat 99.2 2.3E-12 8E-17 123.7 2.1 162 43-257 95-258 (486)
125 1jcn_A Inosine monophosphate d 99.1 4.6E-12 1.6E-16 122.7 -0.2 115 42-196 109-228 (514)
126 3ghd_A A cystathionine beta-sy 99.1 2.3E-11 7.8E-16 84.1 2.9 53 1-54 18-70 (70)
127 3fio_A A cystathionine beta-sy 99.1 2.8E-10 9.7E-15 78.7 8.6 69 154-222 2-70 (70)
128 3fio_A A cystathionine beta-sy 98.6 8.9E-08 3.1E-12 65.8 6.3 48 218-266 1-48 (70)
129 2pli_A Uncharacterized protein 97.6 2.3E-05 7.8E-10 56.7 2.7 52 292-351 35-87 (91)
130 3llb_A Uncharacterized protein 97.6 1.7E-05 5.7E-10 56.3 1.7 52 291-350 25-77 (83)
131 3lae_A UPF0053 protein HI0107; 97.6 1.8E-05 6.2E-10 55.8 1.5 51 291-349 25-76 (81)
132 2pls_A CBS domain protein; APC 97.5 3.2E-05 1.1E-09 55.2 1.9 45 299-351 37-82 (86)
133 2oai_A Hemolysin; PFAM03471, x 97.5 3.1E-05 1.1E-09 56.3 1.4 45 299-351 45-90 (94)
134 2r2z_A Hemolysin; APC85144, en 97.5 4.8E-05 1.6E-09 55.2 2.3 51 293-351 34-87 (93)
135 2p13_A CBS domain; alpha-beta 97.4 4E-05 1.4E-09 55.3 1.8 44 299-350 41-85 (90)
136 2p4p_A Hypothetical protein HD 97.4 5.1E-05 1.7E-09 54.2 2.0 45 299-351 35-80 (86)
137 2o3g_A Putative protein; APC85 97.4 3.4E-05 1.2E-09 55.9 1.0 53 291-351 33-88 (92)
138 2p3h_A Uncharacterized CBS dom 97.4 4.9E-05 1.7E-09 55.8 1.5 50 293-351 30-85 (101)
139 2rk5_A Putative hemolysin; str 97.3 5E-05 1.7E-09 54.4 1.0 53 291-351 24-83 (87)
140 2nqw_A CBS domain protein; PFA 97.3 0.0001 3.5E-09 53.4 2.4 45 299-351 44-89 (93)
141 3ded_A Probable hemolysin; str 97.2 0.0001 3.4E-09 55.5 1.2 44 299-350 64-108 (113)
142 1tif_A IF3-N, translation init 63.2 19 0.00066 24.4 5.5 34 5-38 12-45 (78)
143 1tif_A IF3-N, translation init 58.5 15 0.00051 24.9 4.3 25 240-264 13-37 (78)
144 1svj_A Potassium-transporting 27.8 61 0.0021 25.1 4.0 34 163-196 121-154 (156)
145 1p0z_A Sensor kinase CITA; tra 26.0 48 0.0016 24.5 3.0 16 243-258 106-121 (131)
146 3by8_A Sensor protein DCUS; hi 25.3 48 0.0016 24.9 3.0 88 161-262 41-130 (142)
147 3r8s_H 50S ribosomal protein L 23.4 73 0.0025 24.5 3.6 27 14-40 86-112 (149)
148 3fz4_A Putative arsenate reduc 23.4 1.8E+02 0.0061 21.1 5.7 92 154-254 7-110 (120)
149 3fan_A Non-structural protein; 23.3 39 0.0013 27.6 2.1 24 239-262 125-148 (213)
150 2w5e_A Putative serine proteas 20.9 56 0.0019 25.5 2.6 23 236-258 122-144 (163)
151 3tjo_A Serine protease HTRA1; 20.6 54 0.0018 27.1 2.6 21 239-259 187-207 (231)
No 1
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=100.00 E-value=2.1e-33 Score=252.51 Aligned_cols=223 Identities=18% Similarity=0.276 Sum_probs=188.5
Q ss_pred CccCCcCEEEEEcC-CCcEEEEEeHHHHHHHHHh-------ccC------CCcccccccccccCCeEEeCCCcHHHHHHH
Q 017536 1 MAARRVDALLLTDS-NALLCGILTDKDIATRVIA-------REL------NLEETPVSKVMTRNPTFVLSDTLAVEALQK 66 (369)
Q Consensus 1 M~~~~~~~~~V~d~-~~~~~Givt~~Di~~~~~~-------~~~------~~~~~~v~dim~~~~i~v~~~~~l~~a~~~ 66 (369)
|.+++++++||+|+ +|+++|++|.+||++.+.. ... ...+.+++++|.++++++.+++++.+|++.
T Consensus 30 m~~~~~~~lpV~d~~~~~~~Givt~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~~~~a~~~ 109 (280)
T 3kh5_A 30 MNENKYRRLPVVNAGNNKVVGIITSMDIVDFMGGGSKYNLIREKHERNFLAAINEPVREIMEENVITLKENADIDEAIET 109 (280)
T ss_dssp HHHHCCCEEEEECTTTCBEEEEEEHHHHHHHTTTSGGGHHHHTTSTTCHHHHTTSBGGGTSBCSCCCEETTCBHHHHHHH
T ss_pred HHhCCCcEeeEEECCCCeEEEEEEHHHHHHHhcccchhhhhhhccccchhHHhhhhHHHhcCCCCEEECCCCCHHHHHHH
Confidence 56789999999996 7899999999999854311 000 011468999999999999999999999999
Q ss_pred HHhCCCeEeeEee-CCeEEEEEehHHHHHHHHHHHHHHHhhhhHHHHHHHhHHHhcCCCCCChhhHHHHHHHHhCCCCcc
Q 017536 67 MVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHWGTSISGPNTFIETLRERMFRPSLS 145 (369)
Q Consensus 67 m~~~~~~~lpVvd-~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~ 145 (369)
|.+++++++||+| +|+++|+++..|+++..... .....+++
T Consensus 110 ~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~--------------------------------------~~~~~~v~ 151 (280)
T 3kh5_A 110 FLTKNVGGAPIVNDENQLISLITERDVIRALLDK--------------------------------------IDENEVID 151 (280)
T ss_dssp HHHTTCSEEEEECTTCBEEEEEEHHHHHHHHGGG--------------------------------------SCTTCBSG
T ss_pred HHhCCCCEEEEEcCCCEEEEEEEHHHHHHHHhhc--------------------------------------CCCCCCHH
Confidence 9999999999998 79999999999987652110 01224688
Q ss_pred ccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEeCCEEEEEeehHHHHHHHHhcCC-----------Cccccccccc
Q 017536 146 TIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNL-----------PADSTLVEKV 214 (369)
Q Consensus 146 ~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d~~~~~Giit~~dll~~~~~~~~-----------~~~~~~v~~~ 214 (369)
++|. +++.++++++++.++++.|.+++++++||+++|+++|++|.+|++ +.+.... .....++.++
T Consensus 152 ~~m~--~~~~~v~~~~~l~~~~~~~~~~~~~~~~Vv~~~~~~Givt~~dl~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 228 (280)
T 3kh5_A 152 DYIT--RDVIVATPGERLKDVARTMVRNGFRRLPVVSEGRLVGIITSTDFI-KLLGSDWAFNHMQTGNVREITNVRMEEI 228 (280)
T ss_dssp GGCB--CSCCCBCTTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHH-HHHTSHHHHHHHHSCCTHHHHHCBHHHH
T ss_pred HHhC--CCCeEECCCCcHHHHHHHHHHcCCCEEEEEECCEEEEEEEHHHHH-HHHhhhhhhhhhcccchhhhhCCcHHHH
Confidence 9998 578999999999999999999999999999999999999999998 4443211 0125689999
Q ss_pred cccCCceecCCCCHHHHHHHHHhCCCceeeEEcCCCcEEEEEeHHHHHHH
Q 017536 215 MTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 264 (369)
Q Consensus 215 m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~di~~~ 264 (369)
|.++++++++++++.+|++.|.+++++++||+|++|+++|+||..||+++
T Consensus 229 m~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g~~~Givt~~dil~~ 278 (280)
T 3kh5_A 229 MKRDVITAKEGDKLKKIAEIMVTNDIGALPVVDENLRIKGIITEKDVLKY 278 (280)
T ss_dssp SBSSCCCBCTTCBHHHHHHHHHHHTCCEEEEECTTCBEEEEEEHHHHGGG
T ss_pred hcCCCEEECCCCCHHHHHHHHHHCCCCEEEEECCCCeEEEEEeHHHHHHh
Confidence 99999999999999999999999999999999999999999999999874
No 2
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=100.00 E-value=2.7e-33 Score=254.03 Aligned_cols=226 Identities=20% Similarity=0.215 Sum_probs=191.6
Q ss_pred CccCCcCEEEEEcCCCcEEEEEeHHHHHHHHHhcc---------CCCcccccccccccCCeEEeCCCcHHHHHHHHHhCC
Q 017536 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARE---------LNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGK 71 (369)
Q Consensus 1 M~~~~~~~~~V~d~~~~~~Givt~~Di~~~~~~~~---------~~~~~~~v~dim~~~~i~v~~~~~l~~a~~~m~~~~ 71 (369)
|.+++++++||+| ++++|++|.+||++.+.... ......+++++|+++++++.+++++.+|++.|.+++
T Consensus 46 m~~~~~~~~~V~d--~~l~GivT~~Di~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~~~~a~~~m~~~~ 123 (296)
T 3ddj_A 46 INEGGIGRIIVAN--EKIEGLLTTRDLLSTVESYCKDSCSQGDLYHISTTPIIDYMTPNPVTVYNTSDEFTAINIMVTRN 123 (296)
T ss_dssp TTGGGCCEEEEES--SSEEEEEEHHHHHGGGTTCC---CCHHHHHHHHTSBGGGTSEESCCCEETTSCHHHHHHHHHHHT
T ss_pred HHHCCCceEEEEC--CeEEEEEeHHHHHHHhcccccccccchhhHHHhcccHHHhccCCCEEEcCCCCHHHHHHHHHHcC
Confidence 7889999999998 89999999999985442111 012356899999999999999999999999999999
Q ss_pred CeEeeEee-CCeEEEEEehHHHHHHHHHHHHHHHhhhhHHHHHHHhHHHhcCCCCCChhhHHHHHHHHhCCCCccccccC
Q 017536 72 FRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPE 150 (369)
Q Consensus 72 ~~~lpVvd-~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~ 150 (369)
++++||+| +|+++|+++..|++.... ......+++++|.
T Consensus 124 ~~~lpVvd~~~~lvGivt~~dl~~~~~---------------------------------------~~~~~~~v~~~m~- 163 (296)
T 3ddj_A 124 FGSLPVVDINDKPVGIVTEREFLLLYK---------------------------------------DLDEIFPVKVFMS- 163 (296)
T ss_dssp CSEEEEECTTSCEEEEEEHHHHGGGGG---------------------------------------GSCCCCBHHHHSB-
T ss_pred CCEEEEEcCCCcEEEEEeHHHHHHhhh---------------------------------------cccccccHHHhhc-
Confidence 99999998 699999999999875310 0122346888887
Q ss_pred CCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-CCEEEEEeehHHHHHHHHhcC-----CCccccccccccccCCceecC
Q 017536 151 KSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQN-----LPADSTLVEKVMTPNPECATI 224 (369)
Q Consensus 151 ~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~~~~~Giit~~dll~~~~~~~-----~~~~~~~v~~~m~~~~~~v~~ 224 (369)
++++++++++++.++++.|.+++++++||++ +|+++|++|.+|+++.+.... ......++.++|.++++++++
T Consensus 164 -~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~v~~ 242 (296)
T 3ddj_A 164 -TKVQTIYKEVRLDQAVKLMLRRGFRRLPVIDDDNKVVGIVTVVNAIKQLAKAVDKLDPDYFYGKVVKDVMVTNLVTIDE 242 (296)
T ss_dssp -CSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHHHHTCTHHHHTCBHHHHSBCCCCBCCT
T ss_pred -CCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHHHHhhcChhhhcCcCHHHHhCCCCeEECC
Confidence 5789999999999999999999999999999 899999999999984433110 001256899999999999999
Q ss_pred CCCHHHHHHHHHhCCCceeeEEcCCCcEEEEEeHHHHHHHHHHHh
Q 017536 225 DTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATV 269 (369)
Q Consensus 225 ~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~di~~~~~~~~ 269 (369)
++++.+|++.|.+++.+++||+|++|+++|+||..||++++....
T Consensus 243 ~~~l~~a~~~m~~~~~~~l~Vvd~~g~~~Giit~~Dil~~l~~~~ 287 (296)
T 3ddj_A 243 LASVNRAAAEMIVKRIGSLLILNKDNTIRGIITERDLLIALHHIL 287 (296)
T ss_dssp TSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEcHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999887665
No 3
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.97 E-value=2.5e-31 Score=244.00 Aligned_cols=231 Identities=16% Similarity=0.178 Sum_probs=185.5
Q ss_pred CccCCcCEEEEEcCCC-cEEEEEeHHHHHHHHHhc---cC---C---Cccc------ccccccccCCeEEeCCCcHHHHH
Q 017536 1 MAARRVDALLLTDSNA-LLCGILTDKDIATRVIAR---EL---N---LEET------PVSKVMTRNPTFVLSDTLAVEAL 64 (369)
Q Consensus 1 M~~~~~~~~~V~d~~~-~~~Givt~~Di~~~~~~~---~~---~---~~~~------~v~dim~~~~i~v~~~~~l~~a~ 64 (369)
|.+++++++||+|+++ +++|++|.+|++..+... .. . .... ++.++|.++++++.+++++.+|+
T Consensus 58 m~~~~~~~~pV~d~~~~~lvGilt~~Dl~~~l~~~~~~~~~~~~l~~~~~~~v~~i~~~~~~~~~~~v~v~~~~~l~~a~ 137 (323)
T 3t4n_C 58 LLQNSIVSAPLWDSKTSRFAGLLTTTDFINVIQYYFSNPDKFELVDKLQLDGLKDIERALGVDQLDTASIHPSRPLFEAC 137 (323)
T ss_dssp HHHTTCSCEEEEETTTTEEEEEECHHHHHHHHHHHHHCGGGGGGGGGCBHHHHHHHHHHTTC----CCCBCTTSBHHHHH
T ss_pred HHHcCCceEEEEeCCCCeEEEEEEHHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHhCCCCCCceEeCCCCcHHHHH
Confidence 5689999999999754 899999999999654321 00 0 1111 23345578999999999999999
Q ss_pred HHHHhCCCeEeeEee-CCe-----EEEEEehHHHHHHHHHHHHHHHhhhhHHHHHHHhHHHhcCCCCCChhhHHHHHHHH
Q 017536 65 QKMVQGKFRHLPVVE-NGE-----VIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHWGTSISGPNTFIETLRER 138 (369)
Q Consensus 65 ~~m~~~~~~~lpVvd-~~~-----~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 138 (369)
+.|.+++++++||+| ++. ++|+++..|++......... ..
T Consensus 138 ~~m~~~~~~~lpVvd~~~~~~~~~l~Givt~~di~~~l~~~~~~----------------------------------~~ 183 (323)
T 3t4n_C 138 LKMLESRSGRIPLIDQDEETHREIVVSVLTQYRILKFVALNCRE----------------------------------TH 183 (323)
T ss_dssp HHHHHHTCSEEEEEEECTTTCCEEEEEEEEHHHHHHHHHHHCGG----------------------------------GG
T ss_pred HHHHhCCeeEEEEEecCCCCCccceEEEecHHHHHHHHHhcCCc----------------------------------hh
Confidence 999999999999998 453 99999999998764321100 11
Q ss_pred hCCCCcccc---ccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-CCEEEEEeehHHHHHHHHhcCC-Ccccccccc
Q 017536 139 MFRPSLSTI---IPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNL-PADSTLVEK 213 (369)
Q Consensus 139 ~~~~~v~~i---m~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~~~~~Giit~~dll~~~~~~~~-~~~~~~v~~ 213 (369)
....+++++ |. ++++++++++++.++++.|.+++++++||++ +|+++|++|.+|++ +.+.... .....++.+
T Consensus 184 ~~~~~v~~~~~~m~--~~~~~v~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~-~~~~~~~~~~~~~~v~~ 260 (323)
T 3t4n_C 184 FLKIPIGDLNIITQ--DNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVL-GLIKGGIYNDLSLSVGE 260 (323)
T ss_dssp GCCSBGGGTTCSBC--TTCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEETTHHH-HHHHTTHHHHTTSBHHH
T ss_pred hhhCcHHHcCCCCC--CCcEEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHHH-HHHhhchhhhccCCHHH
Confidence 334578888 76 6799999999999999999999999999999 79999999999998 5544332 223568999
Q ss_pred cccc------CCceecCCCCHHHHHHHHHhCCCceeeEEcCCCcEEEEEeHHHHHHHHHHH
Q 017536 214 VMTP------NPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVAT 268 (369)
Q Consensus 214 ~m~~------~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~di~~~~~~~ 268 (369)
+|.+ +++++++++++.+|+++|.+++++++||+|++|+++|+||..||++++++.
T Consensus 261 ~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~~~l~Giit~~Dil~~l~~~ 321 (323)
T 3t4n_C 261 ALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGVLTLSDILKYILLG 321 (323)
T ss_dssp HGGGSCTTCCCCEEECTTCBHHHHHHHHHHSCCCEEEEECTTSBEEEEEEHHHHHHHHHHC
T ss_pred HHhhccccCCCCEEECCCCCHHHHHHHHHHhCCCEEEEECCCCcEEEEEEHHHHHHHHHhc
Confidence 9987 789999999999999999999999999999999999999999999988764
No 4
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.97 E-value=4.7e-31 Score=237.44 Aligned_cols=219 Identities=18% Similarity=0.246 Sum_probs=174.7
Q ss_pred CccCCcCEEEEEcCCCcEEEEEeHHHHHHHHHhccCCCcccccccccccCCeEEeCCCcHHHHHHHHHhCCCeEeeEee-
Q 017536 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE- 79 (369)
Q Consensus 1 M~~~~~~~~~V~d~~~~~~Givt~~Di~~~~~~~~~~~~~~~v~dim~~~~i~v~~~~~l~~a~~~m~~~~~~~lpVvd- 79 (369)
|.+++++++||+|++|+++|++|.+|+++. +.+.+++++|.++++++++++++.+|++.|.+++++.+||+|
T Consensus 27 ~~~~~~~~~pV~d~~~~~~Giv~~~dl~~~-------~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~ 99 (282)
T 2yzq_A 27 FKKYKVRSFPVVNKEGKLVGIISVKRILVN-------PDEEQLAMLVKRDVPVVKENDTLKKAAKLMLEYDYRRVVVVDS 99 (282)
T ss_dssp -----CCEEEEECTTCCEEEEEESSCC-----------------CCCBSCCCEEETTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred HHHcCCCeEEEEcCCCcEEEEEEHHHHHhh-------hccCCHHHHcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEcC
Confidence 567899999999988999999999999843 235789999999899999999999999999999999999999
Q ss_pred CCeEEEEEehHHHHH-HHHHHHHHHHhhhhHHHHHHHhHHHhcCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeC
Q 017536 80 NGEVIALLDIAKCLY-DAIARMERAAEKGKAIAAAVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTIS 158 (369)
Q Consensus 80 ~~~~vGiv~~~dil~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~ 158 (369)
+|+++|+++..|+++ ..... ......+++++|. .++++++
T Consensus 100 ~~~~~Giit~~di~~~~~~~~-------------------------------------~~~~~~~v~~~m~--~~~~~v~ 140 (282)
T 2yzq_A 100 KGKPVGILTVGDIIRRYFAKS-------------------------------------EKYKGVEIEPYYQ--RYVSIVW 140 (282)
T ss_dssp TSCEEEEEEHHHHHHHTTTTC-------------------------------------SGGGGCBSTTTSB--SCCCCEE
T ss_pred CCEEEEEEEHHHHHHHHHhcc-------------------------------------CCcccCcHHHHhC--CCCEEEC
Confidence 589999999999876 31100 0011346788997 6788999
Q ss_pred CCCcHHHHHHHHHHcCCceEEEEe-CCEEEEEeehHHHH------HHHH------hc-----------------CCCccc
Q 017536 159 PTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDIL------MRVI------SQ-----------------NLPADS 208 (369)
Q Consensus 159 ~~~~l~~~~~~m~~~~~~~~~V~d-~~~~~Giit~~dll------~~~~------~~-----------------~~~~~~ 208 (369)
+++++.++++.|.+++++++||++ +|+++|++|.+|++ +.+. .. ......
T Consensus 141 ~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~~Giit~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (282)
T 2yzq_A 141 EGTPLKAALKALLLSNSMALPVVDSEGNLVGIVDETDLLRDSEIVRIMKSTELAASSEEEWILESHPTLLFEKFELQLPN 220 (282)
T ss_dssp TTSBHHHHHHHHHTCSSSEEEEECTTSCEEEEEEGGGGGGCGGGCC--------------------------------CC
T ss_pred CCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHhhhhhhhhhhccchhhhhhhhhhhcccchHHHHhHhhhhhcc
Confidence 999999999999999999999998 88999999999997 2221 00 011135
Q ss_pred cccccccccCCceecCCCCHHHHHHHHHhCCCceeeEEcCCCcEEEEEeHHHHHHHH
Q 017536 209 TLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAA 265 (369)
Q Consensus 209 ~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~di~~~~ 265 (369)
.+++++|+++++++++++++.+|+++|.+++++++||+|++|+++|+||..||++++
T Consensus 221 ~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~lvGiit~~Dil~~~ 277 (282)
T 2yzq_A 221 KPVAEIMTRDVIVATPHMTVHEVALKMAKYSIEQLPVIRGEGDLIGLIRDFDLLKVL 277 (282)
T ss_dssp CBGGGTCBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEETTTEEEEEEEHHHHGGGG
T ss_pred CCHHHhcCCCCceeCCCCCHHHHHHHHHHcCcceeEEECCCCCEEEEEeHHHHHHHH
Confidence 789999999999999999999999999999999999999888999999999999744
No 5
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.97 E-value=2e-29 Score=232.41 Aligned_cols=232 Identities=16% Similarity=0.176 Sum_probs=185.9
Q ss_pred CccCCcCEEEEEcCC-CcEEEEEeHHHHHHHHHhccC---CCc------cccccc-------ccccCC--eEEeCCCcHH
Q 017536 1 MAARRVDALLLTDSN-ALLCGILTDKDIATRVIAREL---NLE------ETPVSK-------VMTRNP--TFVLSDTLAV 61 (369)
Q Consensus 1 M~~~~~~~~~V~d~~-~~~~Givt~~Di~~~~~~~~~---~~~------~~~v~d-------im~~~~--i~v~~~~~l~ 61 (369)
|.+++++++||+|++ ++++|++|.+|+++.+..... ... ..++.. +|.+++ +++.+++++.
T Consensus 50 ~~~~~~~~~pV~d~~~~~~vGiv~~~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~im~~~~~~~~v~~~~~~~ 129 (334)
T 2qrd_G 50 LTLNNIVSAPLWDSEANKFAGLLTMADFVNVIKYYYQSSSFPEAIAEIDKFRLLGLREVERKIGAIPPETIYVHPMHSLM 129 (334)
T ss_dssp HHHHTCSCEEEEETTTTEEEEEECHHHHHHHHHHHHHHCSCGGGGGGGGSCBHHHHHHHHHHHTCSCSSCCCBCTTSBHH
T ss_pred HHHcCCeEEEEEeCCCCeEEEEEEHHHHHHHHHHHhhccCCccHHHHHhhhchhhHHHHHHhhccCCCceeeeCCCCcHH
Confidence 457889999999976 799999999999854432100 111 233333 366667 9999999999
Q ss_pred HHHHHHHhCCCeEeeEee-CC-e----EEEEEehHHHHHHHHHHHHHHHhhhhHHHHHHHhHHHhcCCCCCChhhHHHHH
Q 017536 62 EALQKMVQGKFRHLPVVE-NG-E----VIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHWGTSISGPNTFIETL 135 (369)
Q Consensus 62 ~a~~~m~~~~~~~lpVvd-~~-~----~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 135 (369)
+|++.|.+++++++||+| ++ + ++|+++..|++........
T Consensus 130 ~a~~~~~~~~~~~~~Vvd~~~~~~~~~~~Givt~~dl~~~~~~~~~---------------------------------- 175 (334)
T 2qrd_G 130 DACLAMSKSRARRIPLIDVDGETGSEMIVSVLTQYRILKFISMNCK---------------------------------- 175 (334)
T ss_dssp HHHHHHHHSCCSEEEEEEEETTTTEEEEEEEEEHHHHHHHHHHHCG----------------------------------
T ss_pred HHHHHHHHCCceEEEEEeCCCCcCccceEEEeeHHHHHHHHHhhcc----------------------------------
Confidence 999999999999999998 43 4 9999999999876332100
Q ss_pred HHHhCCCCccc---cccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-CCEEEEEeehHHHHHHHHhcCC-Cccccc
Q 017536 136 RERMFRPSLST---IIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNL-PADSTL 210 (369)
Q Consensus 136 ~~~~~~~~v~~---im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~~~~~Giit~~dll~~~~~~~~-~~~~~~ 210 (369)
.......++++ +|. +++.++++++++.++++.|.+++++++||++ +|+++|++|.+|++ +.+..+. .....+
T Consensus 176 ~~~~~~~~v~~l~~~m~--~~~~~v~~~~~~~~~~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~-~~~~~~~~~~~~~~ 252 (334)
T 2qrd_G 176 ETAMLRVPLNQMTIGTW--SNLATASMETKVYDVIKMLAEKNISAVPIVNSEGTLLNVYESVDVM-HLIQDGDYSNLDLS 252 (334)
T ss_dssp GGGGCCCBGGGSSCSBC--SSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEETHHHH-HHHTTSCGGGGGSB
T ss_pred chhhhhCcHHHhCCccc--CCceEECCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEHHHHH-HHhhccccccccCc
Confidence 00123456777 476 6789999999999999999999999999999 78999999999998 5554432 233578
Q ss_pred ccccccc------CCceecCCCCHHHHHHHHHhCCCceeeEEcCCCcEEEEEeHHHHHHHHHHHh
Q 017536 211 VEKVMTP------NPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATV 269 (369)
Q Consensus 211 v~~~m~~------~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~di~~~~~~~~ 269 (369)
+.++|.+ +++++++++++.+|++.|.+++++++||+|++|+++|+||..||++++....
T Consensus 253 v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~l~Giit~~dil~~~~~~~ 317 (334)
T 2qrd_G 253 VGEALLKRPANFDGVHTCRATDRLDGIFDAIKHSRVHRLFVVDENLKLEGILSLADILNYIIYDK 317 (334)
T ss_dssp HHHHHTTCCTTCCCCCEECTTCBHHHHHHHHHHSCCCEEEEECTTCBEEEEEEHHHHHHHHHSCC
T ss_pred HHHHHhcccccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHHHHHHHhcc
Confidence 9999984 8899999999999999999999999999999999999999999999887554
No 6
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.96 E-value=6.6e-29 Score=228.62 Aligned_cols=235 Identities=18% Similarity=0.221 Sum_probs=184.0
Q ss_pred CccCCcCEEEEEcCC-CcEEEEEeHHHHHHHHHhcc-------CCCcccc-------cccccccCCeEEeCCCcHHHHHH
Q 017536 1 MAARRVDALLLTDSN-ALLCGILTDKDIATRVIARE-------LNLEETP-------VSKVMTRNPTFVLSDTLAVEALQ 65 (369)
Q Consensus 1 M~~~~~~~~~V~d~~-~~~~Givt~~Di~~~~~~~~-------~~~~~~~-------v~dim~~~~i~v~~~~~l~~a~~ 65 (369)
|.+++++++||+|++ ++++|++|.+|+++.+.... ..+...+ +.++|.++++++.+++++.+|++
T Consensus 63 ~~~~~~~~~pV~d~~~~~~vGivt~~Dll~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~im~~~~~~v~~~~~~~~a~~ 142 (330)
T 2v8q_E 63 LVTNGVRAAPLWDSKKQSFVGMLTITDFINILHRYYKSALVQIYELEEHKIETWREVYLQDSFKPLVCISPNASLFDAVS 142 (330)
T ss_dssp HHHHTCSEEEEEETTTTEEEEEEEHHHHHHHHHHHHHHHTTTCCCGGGCBHHHHHHHHSSSSCCCCCCBCTTSBHHHHHH
T ss_pred HHHcCCcEEEEEeCCCCeEEEEEEHHHHHHHHHHHHhccccchhHHhhccHHHHHHHHhhcccCCceEeCCCCCHHHHHH
Confidence 457899999999977 68999999999986543211 1111222 34678999999999999999999
Q ss_pred HHHhCCCeEeeEee--CCeEEEEEehHHHHHHHHHHHHHHHhhhhHHHHHHHhHHHhcCCCCCChhhHHHHHHHHhCCCC
Q 017536 66 KMVQGKFRHLPVVE--NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHWGTSISGPNTFIETLRERMFRPS 143 (369)
Q Consensus 66 ~m~~~~~~~lpVvd--~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 143 (369)
.|.+++++++||+| +|+++|+++..|+++....... .. ... . ....+
T Consensus 143 ~~~~~~~~~~~Vvd~~~~~~~Givt~~dl~~~~~~~~~---------------------~~-~~~-~--------~~~~~ 191 (330)
T 2v8q_E 143 SLIRNKIHRLPVIDPESGNTLYILTHKRILKFLKLFIT---------------------EF-PKP-E--------FMSKS 191 (330)
T ss_dssp HHHHHTCSCEEEECTTTCCEEEEECHHHHHHHHHHHSC---------------------SS-SCC-G--------GGGSB
T ss_pred HHHHCCCCeEEEEeCCCCcEEEEEcHHHHHHHHHHHhh---------------------cc-Cch-h--------hhcCC
Confidence 99999999999998 5899999999999875321100 00 000 0 01123
Q ss_pred cccc--ccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-CCEEEEEeehHHHHHHHHhcC-CCcccccccccc----
Q 017536 144 LSTI--IPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQN-LPADSTLVEKVM---- 215 (369)
Q Consensus 144 v~~i--m~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~~~~~Giit~~dll~~~~~~~-~~~~~~~v~~~m---- 215 (369)
++++ |. ..+++++++++++.++++.|.+++++++||++ +|+++|++|.+|++ +..... ......++.++|
T Consensus 192 v~~~~v~~-~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~l~Giit~~dl~-~~~~~~~~~~~~~~v~~~~~~~~ 269 (330)
T 2v8q_E 192 LEELQIGT-YANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVI-NLAAEKTYNNLDVSVTKALQHRS 269 (330)
T ss_dssp HHHHTCSB-CSSCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEEEGGGTG-GGGGSSCCCCCSSBHHHHGGGCC
T ss_pred HHHhcccC-cCCceEECCCCCHHHHHHHHHHcCCCeEEEECCCCcEEEEEEHHHHH-HHHhccccccccCcHHHHHhccc
Confidence 3343 32 14688999999999999999999999999999 89999999999997 444322 222256788888
Q ss_pred --ccCCceecCCCCHHHHHHHHHhCCCceeeEEcCCCcEEEEEeHHHHHHHHHHH
Q 017536 216 --TPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVAT 268 (369)
Q Consensus 216 --~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~di~~~~~~~ 268 (369)
.++++++++++++.+|++.|.+++++++||+|++|+++|+||..||++++...
T Consensus 270 ~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g~l~Giit~~Dil~~~~~~ 324 (330)
T 2v8q_E 270 HYFEGVLKCYLHETLEAIINRLVEAEVHRLVVVDEHDVVKGIVSLSDILQALVLT 324 (330)
T ss_dssp SCCCSCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHSS
T ss_pred cccCCCeEECCCCcHHHHHHHHHHCCCcEEEEEcCCCcEEEEEeHHHHHHHHHhh
Confidence 47899999999999999999999999999999999999999999999977643
No 7
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.96 E-value=6.1e-29 Score=225.32 Aligned_cols=199 Identities=20% Similarity=0.266 Sum_probs=167.7
Q ss_pred cCCCcccccccccccCCeEEeCCCcHHHHHHHHHhCCCeEeeEeeCCeEEEEEehHHHHHHHHHHHHHHHhhhhHHHHHH
Q 017536 35 ELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAV 114 (369)
Q Consensus 35 ~~~~~~~~v~dim~~~~i~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~ 114 (369)
+.+....+|+|+|+++++++++++++.+|++.|.+++++++||++ |+++|++|..|++........
T Consensus 14 ~~~~~~~~V~dim~~~~~~v~~~~~v~~a~~~m~~~~~~~~~V~d-~~l~GivT~~Di~~~~~~~~~------------- 79 (296)
T 3ddj_A 14 NLYFQGMNIETLMIKNPPILSKEDRLGSAFKKINEGGIGRIIVAN-EKIEGLLTTRDLLSTVESYCK------------- 79 (296)
T ss_dssp CCTTCCSSGGGTCEESCCEECTTSBHHHHHHHTTGGGCCEEEEES-SSEEEEEEHHHHHGGGTTCC--------------
T ss_pred hhhhcccCHHHhccCCCcEECCCccHHHHHHHHHHCCCceEEEEC-CeEEEEEeHHHHHHHhccccc-------------
Confidence 445667899999999999999999999999999999999999999 999999999999865221000
Q ss_pred HhHHHhcCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-CCEEEEEeehH
Q 017536 115 EGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSK 193 (369)
Q Consensus 115 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~~~~~Giit~~ 193 (369)
...+...+.. ....+++++|. ++++++++++++.++++.|.+++++++||++ +++++|++|.+
T Consensus 80 -------------~~~~~~~~~~-~~~~~v~~im~--~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~~~lvGivt~~ 143 (296)
T 3ddj_A 80 -------------DSCSQGDLYH-ISTTPIIDYMT--PNPVTVYNTSDEFTAINIMVTRNFGSLPVVDINDKPVGIVTER 143 (296)
T ss_dssp ---------------CCHHHHHH-HHTSBGGGTSE--ESCCCEETTSCHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHH
T ss_pred -------------ccccchhhHH-HhcccHHHhcc--CCCEEEcCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHH
Confidence 0011111111 23567999998 5788999999999999999999999999998 88999999999
Q ss_pred HHHHHHHhcCCCccccccccccccCCceecCCCCHHHHHHHHHhCCCceeeEEcCCCcEEEEEeHHHHHHHHH
Q 017536 194 DILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266 (369)
Q Consensus 194 dll~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~di~~~~~ 266 (369)
|++ +.+..... ..++.++|.++++++++++++.++++.|.+++.+++||+|++|+++|+||..|+++++.
T Consensus 144 dl~-~~~~~~~~--~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~ 213 (296)
T 3ddj_A 144 EFL-LLYKDLDE--IFPVKVFMSTKVQTIYKEVRLDQAVKLMLRRGFRRLPVIDDDNKVVGIVTVVNAIKQLA 213 (296)
T ss_dssp HHG-GGGGGSCC--CCBHHHHSBCSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHH
T ss_pred HHH-Hhhhcccc--cccHHHhhcCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHH
Confidence 997 54443322 46899999999999999999999999999999999999999999999999999998665
No 8
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.95 E-value=4.6e-27 Score=210.99 Aligned_cols=194 Identities=19% Similarity=0.288 Sum_probs=158.0
Q ss_pred ccccccCCeEEeCCCcHHHHHHHHHhCCCeEeeEee--CCeEEEEEehHHHHHHHHHHHHHHHhhhhHHHHHHHhHHHhc
Q 017536 44 SKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE--NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHW 121 (369)
Q Consensus 44 ~dim~~~~i~v~~~~~l~~a~~~m~~~~~~~lpVvd--~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (369)
..+|+++++++++++|+.+|+++|.+++++++||+| +|+++|++|..|++........ ...+ ....
T Consensus 7 ~~i~~~~~~~v~~~~sl~~a~~~m~~~~~~~lpV~d~~~~~~~Givt~~di~~~~~~~~~---------~~~~---~~~~ 74 (280)
T 3kh5_A 7 KIAQNKKIVTVYPTTTIRKALMTMNENKYRRLPVVNAGNNKVVGIITSMDIVDFMGGGSK---------YNLI---REKH 74 (280)
T ss_dssp GTSCCSCCCCBCTTSBHHHHHHHHHHHCCCEEEEECTTTCBEEEEEEHHHHHHHTTTSGG---------GHHH---HTTS
T ss_pred HHhcCCCcEEECCCCcHHHHHHHHHhCCCcEeeEEECCCCeEEEEEEHHHHHHHhcccch---------hhhh---hhcc
Confidence 446778999999999999999999999999999998 5999999999999875311000 0000 0000
Q ss_pred CCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-CCEEEEEeehHHHHHHHH
Q 017536 122 GTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVI 200 (369)
Q Consensus 122 g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~~~~~Giit~~dll~~~~ 200 (369)
...+. .....+++++|. ++++++++++++.++++.|.+++++++||++ +|+++|++|.+|++ +.+
T Consensus 75 ----------~~~~~-~~~~~~v~~im~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~-~~~ 140 (280)
T 3kh5_A 75 ----------ERNFL-AAINEPVREIME--ENVITLKENADIDEAIETFLTKNVGGAPIVNDENQLISLITERDVI-RAL 140 (280)
T ss_dssp ----------TTCHH-HHTTSBGGGTSB--CSCCCEETTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHH-HHH
T ss_pred ----------ccchh-HHhhhhHHHhcC--CCCEEECCCCCHHHHHHHHHhCCCCEEEEEcCCCEEEEEEEHHHHH-HHH
Confidence 00011 122567999999 5789999999999999999999999999998 89999999999998 555
Q ss_pred hcCCCccccccccccccCCceecCCCCHHHHHHHHHhCCCceeeEEcCCCcEEEEEeHHHHHHHH
Q 017536 201 SQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAA 265 (369)
Q Consensus 201 ~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~di~~~~ 265 (369)
...... ..++.++|.++++++++++++.++++.|.+++.+++||+ ++|+++|+||..|+++++
T Consensus 141 ~~~~~~-~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~Vv-~~~~~~Givt~~dl~~~~ 203 (280)
T 3kh5_A 141 LDKIDE-NEVIDDYITRDVIVATPGERLKDVARTMVRNGFRRLPVV-SEGRLVGIITSTDFIKLL 203 (280)
T ss_dssp GGGSCT-TCBSGGGCBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEE-ETTEEEEEEEHHHHHHHH
T ss_pred hhcCCC-CCCHHHHhCCCCeEECCCCcHHHHHHHHHHcCCCEEEEE-ECCEEEEEEEHHHHHHHH
Confidence 443332 458999999999999999999999999999999999999 689999999999999865
No 9
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.94 E-value=9.7e-27 Score=209.20 Aligned_cols=178 Identities=27% Similarity=0.378 Sum_probs=140.5
Q ss_pred cccccccccCCeEEeCCCcHHHHHHHHHhCCCeEeeEee-CCeEEEEEehHHHHHHHHHHHHHHHhhhhHHHHHHHhHHH
Q 017536 41 TPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119 (369)
Q Consensus 41 ~~v~dim~~~~i~v~~~~~l~~a~~~m~~~~~~~lpVvd-~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (369)
++++++|+++++++++++++.+|++.|.+++++++||+| +|+++|+++..|++..
T Consensus 1 m~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~pV~d~~~~~~Giv~~~dl~~~------------------------ 56 (282)
T 2yzq_A 1 MRVKTIMTQNPVTITLPATRNYALELFKKYKVRSFPVVNKEGKLVGIISVKRILVN------------------------ 56 (282)
T ss_dssp CBHHHHSEESCCCEESSCC------------CCEEEEECTTCCEEEEEESSCC---------------------------
T ss_pred CchHHhccCCCeEECCCCcHHHHHHHHHHcCCCeEEEEcCCCcEEEEEEHHHHHhh------------------------
Confidence 368899999999999999999999999999999999999 7999999999998743
Q ss_pred hcCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-CCEEEEEeehHHHHHH
Q 017536 120 HWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMR 198 (369)
Q Consensus 120 ~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~~~~~Giit~~dll~~ 198 (369)
....+++++|. ++++++++++++.++++.|.+++.+++||++ +|+++|++|.+|++++
T Consensus 57 -------------------~~~~~v~~~m~--~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~di~~~ 115 (282)
T 2yzq_A 57 -------------------PDEEQLAMLVK--RDVPVVKENDTLKKAAKLMLEYDYRRVVVVDSKGKPVGILTVGDIIRR 115 (282)
T ss_dssp --------------------------CCCB--SCCCEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHH
T ss_pred -------------------hccCCHHHHcC--CCCcEECCCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHH
Confidence 11245788998 4688999999999999999999999999999 7899999999999831
Q ss_pred HHhcCCCccccccccccccCCceecCCCCHHHHHHHHHhCCCceeeEEcCCCcEEEEEeHHHHHH
Q 017536 199 VISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITH 263 (369)
Q Consensus 199 ~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~di~~ 263 (369)
.+.........++.++|.++++++++++++.++++.|.+++++++||+|++|+++|+||..|+++
T Consensus 116 ~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~~Giit~~dl~~ 180 (282)
T 2yzq_A 116 YFAKSEKYKGVEIEPYYQRYVSIVWEGTPLKAALKALLLSNSMALPVVDSEGNLVGIVDETDLLR 180 (282)
T ss_dssp TTTTCSGGGGCBSTTTSBSCCCCEETTSBHHHHHHHHHTCSSSEEEEECTTSCEEEEEEGGGGGG
T ss_pred HHhccCCcccCcHHHHhCCCCEEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHhh
Confidence 55432222356889999999999999999999999999999999999999999999999999984
No 10
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.93 E-value=7.6e-25 Score=200.78 Aligned_cols=205 Identities=17% Similarity=0.242 Sum_probs=156.5
Q ss_pred ccccccccccc--CCeEEeCCCcHHHHHHHHHhCCCeEeeEee-C-CeEEEEEehHHHHHHHHHHHHHHHhhhhHHHHHH
Q 017536 39 EETPVSKVMTR--NPTFVLSDTLAVEALQKMVQGKFRHLPVVE-N-GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAV 114 (369)
Q Consensus 39 ~~~~v~dim~~--~~i~v~~~~~l~~a~~~m~~~~~~~lpVvd-~-~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~ 114 (369)
...++.|+|.+ ++++++.++|+.+|++.|.+++++++||+| + ++++|+++..|++..+....... .. .
T Consensus 28 ~~~~~~d~m~~~~~~v~v~~~~sv~~a~~~m~~~~~~~~pV~d~~~~~lvGilt~~Dl~~~l~~~~~~~-~~-------~ 99 (323)
T 3t4n_C 28 NSKTSYDVLPVSYRLIVLDTSLLVKKSLNVLLQNSIVSAPLWDSKTSRFAGLLTTTDFINVIQYYFSNP-DK-------F 99 (323)
T ss_dssp HHSBHHHHSCSEEEEEEEETTSBHHHHHHHHHHTTCSCEEEEETTTTEEEEEECHHHHHHHHHHHHHCG-GG-------G
T ss_pred HhCchHhhCCCCCcEEEEcCCCcHHHHHHHHHHcCCceEEEEeCCCCeEEEEEEHHHHHHHHHHHHcCc-ch-------h
Confidence 56789999984 578999999999999999999999999998 3 59999999999987654322110 00 0
Q ss_pred HhHHHhcCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-CCE-----EEE
Q 017536 115 EGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENK-----PRG 188 (369)
Q Consensus 115 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~~~-----~~G 188 (369)
..+.. .....+.+.+ ++.++|. ++++++++++++.+|++.|.+++++++||++ ++. ++|
T Consensus 100 ~~l~~----------~~~~~v~~i~---~~~~~~~--~~~v~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~~~~~l~G 164 (323)
T 3t4n_C 100 ELVDK----------LQLDGLKDIE---RALGVDQ--LDTASIHPSRPLFEACLKMLESRSGRIPLIDQDEETHREIVVS 164 (323)
T ss_dssp GGGGG----------CBHHHHHHHH---HHTTC------CCCBCTTSBHHHHHHHHHHHTCSEEEEEEECTTTCCEEEEE
T ss_pred HHHHH----------HHHHHHHHHH---HHhCCCC--CCceEeCCCCcHHHHHHHHHhCCeeEEEEEecCCCCCccceEE
Confidence 00000 0011112211 1334555 6788999999999999999999999999999 553 999
Q ss_pred EeehHHHHHHHHhcC--CCccccccccc---cccCCceecCCCCHHHHHHHHHhCCCceeeEEcCCCcEEEEEeHHHHHH
Q 017536 189 ILTSKDILMRVISQN--LPADSTLVEKV---MTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITH 263 (369)
Q Consensus 189 iit~~dll~~~~~~~--~~~~~~~v~~~---m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~di~~ 263 (369)
++|.+|+++.+.... ......++.++ |.++++++++++++.+|++.|.+++++++||+|++|+++|+||..|+++
T Consensus 165 ivt~~di~~~l~~~~~~~~~~~~~v~~~~~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~ 244 (323)
T 3t4n_C 165 VLTQYRILKFVALNCRETHFLKIPIGDLNIITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLG 244 (323)
T ss_dssp EEEHHHHHHHHHHHCGGGGGCCSBGGGTTCSBCTTCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEETTHHHH
T ss_pred EecHHHHHHHHHhcCCchhhhhCcHHHcCCCCCCCcEEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHHHH
Confidence 999999984433221 11224689999 8889999999999999999999999999999999999999999999998
Q ss_pred HHH
Q 017536 264 AAV 266 (369)
Q Consensus 264 ~~~ 266 (369)
++.
T Consensus 245 ~~~ 247 (323)
T 3t4n_C 245 LIK 247 (323)
T ss_dssp HHH
T ss_pred HHh
Confidence 654
No 11
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.92 E-value=3.8e-24 Score=196.79 Aligned_cols=203 Identities=21% Similarity=0.201 Sum_probs=156.4
Q ss_pred ccccccccc--ccCCeEEeCCCcHHHHHHHHHhCCCeEeeEee-C-CeEEEEEehHHHHHHHHHHHHHHHhhhhHHHHHH
Q 017536 39 EETPVSKVM--TRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-N-GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAV 114 (369)
Q Consensus 39 ~~~~v~dim--~~~~i~v~~~~~l~~a~~~m~~~~~~~lpVvd-~-~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~ 114 (369)
.+.+++|+| .++++++++++++.+|++.|.+++++++||++ + ++++|+++..|++..+..........
T Consensus 33 ~~~~v~dim~p~~~v~~v~~~~~v~~a~~~~~~~~~~~~pV~d~~~~~~vGivt~~Dll~~l~~~~~~~~~~-------- 104 (330)
T 2v8q_E 33 KSHRCYDLIPTSSKLVVFDTSLQVKKAFFALVTNGVRAAPLWDSKKQSFVGMLTITDFINILHRYYKSALVQ-------- 104 (330)
T ss_dssp HHSBGGGGSCSEEEEEEEETTSBHHHHHHHHHHHTCSEEEEEETTTTEEEEEEEHHHHHHHHHHHHHHHTTT--------
T ss_pred HcCcHhhhccCCCcEEEEeCCCcHHHHHHHHHHcCCcEEEEEeCCCCeEEEEEEHHHHHHHHHHHHhccccc--------
Confidence 357899999 78899999999999999999999999999998 4 78999999999987644322110000
Q ss_pred HhHHHhcCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe--CCEEEEEeeh
Q 017536 115 EGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV--ENKPRGILTS 192 (369)
Q Consensus 115 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d--~~~~~Giit~ 192 (369)
.. . ..... ...+.. +++++|. ++++++++++++.++++.|.+++++++||++ +|+++|++|.
T Consensus 105 ------~~-~-l~~~~-~~~~~~-----~~~~im~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~Givt~ 168 (330)
T 2v8q_E 105 ------IY-E-LEEHK-IETWRE-----VYLQDSF--KPLVCISPNASLFDAVSSLIRNKIHRLPVIDPESGNTLYILTH 168 (330)
T ss_dssp ------CC-C-GGGCB-HHHHHH-----HHSSSSC--CCCCCBCTTSBHHHHHHHHHHHTCSCEEEECTTTCCEEEEECH
T ss_pred ------hh-H-Hhhcc-HHHHHH-----HHhhccc--CCceEeCCCCCHHHHHHHHHHCCCCeEEEEeCCCCcEEEEEcH
Confidence 00 0 00000 111111 2457787 6799999999999999999999999999998 6899999999
Q ss_pred HHHHHHHHhcCCC-----ccccccccc--cc-cCCceecCCCCHHHHHHHHHhCCCceeeEEcCCCcEEEEEeHHHHHHH
Q 017536 193 KDILMRVISQNLP-----ADSTLVEKV--MT-PNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 264 (369)
Q Consensus 193 ~dll~~~~~~~~~-----~~~~~v~~~--m~-~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~di~~~ 264 (369)
+|+++.+...... ....++.++ |. ++++++++++++.++++.|.+++.+++||+|++|+++|+||..|++++
T Consensus 169 ~dl~~~~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~l~Giit~~dl~~~ 248 (330)
T 2v8q_E 169 KRILKFLKLFITEFPKPEFMSKSLEELQIGTYANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINL 248 (330)
T ss_dssp HHHHHHHHHHSCSSSCCGGGGSBHHHHTCSBCSSCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEEEGGGTGGG
T ss_pred HHHHHHHHHHhhccCchhhhcCCHHHhcccCcCCceEECCCCCHHHHHHHHHHcCCCeEEEECCCCcEEEEEEHHHHHHH
Confidence 9998433322111 112345554 54 788999999999999999999999999999999999999999999974
Q ss_pred H
Q 017536 265 A 265 (369)
Q Consensus 265 ~ 265 (369)
.
T Consensus 249 ~ 249 (330)
T 2v8q_E 249 A 249 (330)
T ss_dssp G
T ss_pred H
Confidence 3
No 12
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.91 E-value=1.3e-23 Score=193.43 Aligned_cols=207 Identities=14% Similarity=0.178 Sum_probs=155.3
Q ss_pred cccccccccc--CCeEEeCCCcHHHHHHHHHhCCCeEeeEeeC--CeEEEEEehHHHHHHHHHHHHHHHhhhhHHHHHHH
Q 017536 40 ETPVSKVMTR--NPTFVLSDTLAVEALQKMVQGKFRHLPVVEN--GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVE 115 (369)
Q Consensus 40 ~~~v~dim~~--~~i~v~~~~~l~~a~~~m~~~~~~~lpVvd~--~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~ 115 (369)
..+++++|++ +++++++++++.+|++.|.+++++++||+++ ++++|+++.+|++........... ... .+.
T Consensus 21 ~~~v~dim~~~~~vv~v~~~~tv~~a~~~~~~~~~~~~pV~d~~~~~~vGiv~~~Dl~~~~~~~~~~~~-~~~----~~~ 95 (334)
T 2qrd_G 21 SRTSYDVLPTSFRLIVFDVTLFVKTSLSLLTLNNIVSAPLWDSEANKFAGLLTMADFVNVIKYYYQSSS-FPE----AIA 95 (334)
T ss_dssp HSBGGGGSCSEEEEEEEETTSBHHHHHHHHHHHTCSCEEEEETTTTEEEEEECHHHHHHHHHHHHHHCS-CGG----GGG
T ss_pred cCchhhhCCCCCCEEEEcCCCCHHHHHHHHHHcCCeEEEEEeCCCCeEEEEEEHHHHHHHHHHHhhccC-Ccc----HHH
Confidence 5799999975 5789999999999999999999999999984 799999999999876433211000 000 000
Q ss_pred hHHHhcCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-C-CE----EEEE
Q 017536 116 GVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-E-NK----PRGI 189 (369)
Q Consensus 116 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~-~~----~~Gi 189 (369)
... ......+.+.. +++|.+..+++++++++++.++++.|.+++.+++||++ + ++ ++|+
T Consensus 96 ~~~----------~~~~~~i~~~l-----~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~~~~Gi 160 (334)
T 2qrd_G 96 EID----------KFRLLGLREVE-----RKIGAIPPETIYVHPMHSLMDACLAMSKSRARRIPLIDVDGETGSEMIVSV 160 (334)
T ss_dssp GGG----------SCBHHHHHHHH-----HHHTCSCSSCCCBCTTSBHHHHHHHHHHSCCSEEEEEEEETTTTEEEEEEE
T ss_pred HHh----------hhchhhHHHHH-----HhhccCCCceeeeCCCCcHHHHHHHHHHCCceEEEEEeCCCCcCccceEEE
Confidence 000 00011122111 34565323348999999999999999999999999998 4 44 9999
Q ss_pred eehHHHHHHHHhcC--CCcccccccc---ccccCCceecCCCCHHHHHHHHHhCCCceeeEEcCCCcEEEEEeHHHHHHH
Q 017536 190 LTSKDILMRVISQN--LPADSTLVEK---VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHA 264 (369)
Q Consensus 190 it~~dll~~~~~~~--~~~~~~~v~~---~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~di~~~ 264 (369)
+|.+|+++.+.... ......++.+ +|.++++++++++++.+|++.|.+++.+++||+|++|+++|+||..|++++
T Consensus 161 vt~~dl~~~~~~~~~~~~~~~~~v~~l~~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~ 240 (334)
T 2qrd_G 161 LTQYRILKFISMNCKETAMLRVPLNQMTIGTWSNLATASMETKVYDVIKMLAEKNISAVPIVNSEGTLLNVYESVDVMHL 240 (334)
T ss_dssp EEHHHHHHHHHHHCGGGGGCCCBGGGSSCSBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEETHHHHHH
T ss_pred eeHHHHHHHHHhhccchhhhhCcHHHhCCcccCCceEECCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEHHHHHHH
Confidence 99999984433211 1112457888 588899999999999999999999999999999999999999999999986
Q ss_pred HH
Q 017536 265 AV 266 (369)
Q Consensus 265 ~~ 266 (369)
+.
T Consensus 241 ~~ 242 (334)
T 2qrd_G 241 IQ 242 (334)
T ss_dssp HT
T ss_pred hh
Confidence 54
No 13
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.89 E-value=1.8e-22 Score=164.86 Aligned_cols=130 Identities=19% Similarity=0.238 Sum_probs=113.5
Q ss_pred CCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-CCEEEEEeehHHHHHHHHhcCCCc---cccccccccc
Q 017536 141 RPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPA---DSTLVEKVMT 216 (369)
Q Consensus 141 ~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~~~~~Giit~~dll~~~~~~~~~~---~~~~v~~~m~ 216 (369)
..+++++|+|+.+++++++++|+.+|++.|.+++++++||++ +++++|++|.+|+++.+....... ...++.++|.
T Consensus 14 ~~~~~~iM~P~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~~~~lvGiit~~Di~~~~~~~~~~~~~~~~~~v~~im~ 93 (156)
T 3k6e_A 14 LGQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEHDLSQEIMADTDIVHMTK 93 (156)
T ss_dssp HTTGGGGEEETTSSCCEETTSBHHHHHHHHTTSSSSEEEEECC-CBEEEEEEHHHHHHHHHHHTCCHHHHTTSBGGGTCB
T ss_pred hccHHHhCcchhHeEEECCcCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEecchhhhhhhcccccccccccCHHHhhc
Confidence 346899999999999999999999999999999999999998 799999999999985554433221 2568999999
Q ss_pred cCCceecCCCCHHHHHHHHHhCCCceeeEEcCCCcEEEEEeHHHHHHHHHHHhcCC
Q 017536 217 PNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATVGNT 272 (369)
Q Consensus 217 ~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~di~~~~~~~~~~~ 272 (369)
++++++++++++.+|++.|.+++ .+||||++|+++|+||..||++++.+.+.+.
T Consensus 94 ~~~~~v~~~~~l~~~~~~m~~~~--~lpVVd~~g~l~GiiT~~Dil~~~~~~~~~~ 147 (156)
T 3k6e_A 94 TDVAVVSPDFTITEVLHKLVDES--FLPVVDAEGIFQGIITRKSILKAVNALLHDF 147 (156)
T ss_dssp CSCCCBCTTCCHHHHHHHTTTSS--EEEEECTTSBEEEEEEHHHHHHHHHHHSCC-
T ss_pred CCceecccccHHHHHHHHHHHcC--CeEEEecCCEEEEEEEHHHHHHHHHHHhccc
Confidence 99999999999999999998876 4999999999999999999999998777553
No 14
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.87 E-value=2.9e-22 Score=158.61 Aligned_cols=126 Identities=17% Similarity=0.186 Sum_probs=111.1
Q ss_pred CCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe--CCEEEEEeehHHHHHHHHhcCCCccccccccccccCC
Q 017536 142 PSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV--ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNP 219 (369)
Q Consensus 142 ~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d--~~~~~Giit~~dll~~~~~~~~~~~~~~v~~~m~~~~ 219 (369)
.+++++|+|+.+++++++++++.+|++.|.+++++++||++ +++++|++|.+|++ +....+......++.++| +++
T Consensus 2 ~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~~~~~~lvGivt~~dl~-~~~~~~~~~~~~~v~~~m-~~~ 79 (130)
T 3hf7_A 2 VSVNDIMVPRNEIVGIDINDDWKSIVRQLTHSPHGRIVLYRDSLDDAISMLRVREAY-RLMTEKKEFTKEIMLRAA-DEI 79 (130)
T ss_dssp CBHHHHSEEGGGCCEEETTSCHHHHHHHHHTCSSSEEEEESSSGGGEEEEEEHHHHH-HHHTSSSCCCHHHHHHHS-BCC
T ss_pred cCHHHhCccHHHEEEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCCcEEEEEEHHHHH-HHHhccCccchhhHHHhc-cCC
Confidence 35889998767899999999999999999999999999996 47999999999997 555544333356789999 788
Q ss_pred ceecCCCCHHHHHHHHHhCCCceeeEEcCCCcEEEEEeHHHHHHHHHHHh
Q 017536 220 ECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATV 269 (369)
Q Consensus 220 ~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~di~~~~~~~~ 269 (369)
+++++++++.+|++.|.+++.+++||+|++|+++|+||..|+++++++++
T Consensus 80 ~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~g~i 129 (130)
T 3hf7_A 80 YFVPEGTPLSTQLVKFQRNKKKVGLVVDEYGDIQGLVTVEDILEEIVGDF 129 (130)
T ss_dssp CEEETTCBHHHHHHHHHHHCCCEEEEECTTSCEEEEEEHHHHHHHHHC--
T ss_pred eEeCCCCcHHHHHHHHHhcCCeEEEEEcCCCCEEEEeeHHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999999999988765
No 15
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.87 E-value=1e-21 Score=163.26 Aligned_cols=130 Identities=14% Similarity=0.123 Sum_probs=113.7
Q ss_pred hCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-C-CEEEEEeehHHHHHHHHhcCCCccccccccccc
Q 017536 139 MFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-E-NKPRGILTSKDILMRVISQNLPADSTLVEKVMT 216 (369)
Q Consensus 139 ~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~-~~~~Giit~~dll~~~~~~~~~~~~~~v~~~m~ 216 (369)
+...+++++|+|+.+++++++++++.+|++.|.+++++++||++ + ++++|++|.+|++ +...... ..++.++|
T Consensus 39 l~~~~v~diM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~-~~~~~~~---~~~v~~im- 113 (172)
T 3lhh_A 39 LDERTISSLMVPRSDIVFLDLNLPLDANLRTVMQSPHSRFPVCRNNVDDMVGIISAKQLL-SESIAGE---RLELVDLV- 113 (172)
T ss_dssp ----CTTTTSEEGGGCCCEETTSCHHHHHHHHHTCCCSEEEEESSSTTSEEEEEEHHHHH-HHHHTTC---CCCGGGGC-
T ss_pred cCCCCHHHhCccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEEHHHHH-HHHhhcC---cccHHHHh-
Confidence 45678999999877899999999999999999999999999999 5 8999999999998 4444332 56899999
Q ss_pred cCCceecCCCCHHHHHHHHHhCCCceeeEEcCCCcEEEEEeHHHHHHHHHHHhcCCC
Q 017536 217 PNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATVGNTA 273 (369)
Q Consensus 217 ~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~di~~~~~~~~~~~~ 273 (369)
++++++++++++.+|++.|.+++.+++||+|++|+++|+||..||++++++++.++.
T Consensus 114 ~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dil~~l~~~~~de~ 170 (172)
T 3lhh_A 114 KNCNFVPNSLSGMELLEHFRTTGSQMVFVVDEYGDLKGLVTLQDMMDALTGEFFQED 170 (172)
T ss_dssp BCCEEEETTCCHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHTTCC---
T ss_pred cCCeEeCCCCCHHHHHHHHHHcCCeEEEEEeCCCCEEEEeeHHHHHHHHhCCCcccc
Confidence 999999999999999999999999999999999999999999999999999887654
No 16
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.87 E-value=2.2e-22 Score=160.61 Aligned_cols=130 Identities=18% Similarity=0.208 Sum_probs=108.5
Q ss_pred CCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-C-CEEEEEeehHHHHHHHHhcCCCccccccccccccCC
Q 017536 142 PSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-E-NKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNP 219 (369)
Q Consensus 142 ~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~-~~~~Giit~~dll~~~~~~~~~~~~~~v~~~m~~~~ 219 (369)
.+++++|+|+.+++++++++++.+|++.|.+++++++||++ + ++++|++|.+|++ +.+.... ....++.++|. ++
T Consensus 3 ~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~-~~~~~~~-~~~~~v~~~m~-~~ 79 (136)
T 3lfr_A 3 LQVRDIMVPRSQMISIKATQTPREFLPAVIDAAHSRYPVIGESHDDVLGVLLAKDLL-PLILKAD-GDSDDVKKLLR-PA 79 (136)
T ss_dssp CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGG-GGGGSSS-GGGCCGGGTCB-CC
T ss_pred CChHhccccHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHH-HHHHhcc-CCCcCHHHHcC-CC
Confidence 46889999777899999999999999999999999999999 5 7999999999997 4443222 23678999995 48
Q ss_pred ceecCCCCHHHHHHHHHhCCCceeeEEcCCCcEEEEEeHHHHHHHHHHHhcCCCC
Q 017536 220 ECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATVGNTAG 274 (369)
Q Consensus 220 ~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~di~~~~~~~~~~~~~ 274 (369)
+++++++++.+|++.|.+++.+++||+|++|+++|+||..|+++++++++.++.+
T Consensus 80 ~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~~~~~de~~ 134 (136)
T 3lfr_A 80 TFVPESKRLNVLLREFRANHNHMAIVIDEYGGVAGLVTIEDVLEQIVGDIEDEHD 134 (136)
T ss_dssp CEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHTTC---------
T ss_pred eEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhCCCcCccc
Confidence 9999999999999999999999999999999999999999999999988866543
No 17
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.87 E-value=1.9e-21 Score=157.49 Aligned_cols=126 Identities=18% Similarity=0.211 Sum_probs=114.1
Q ss_pred hCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-C-CEEEEEeehHHHHHHHHhcCCCccccccccccc
Q 017536 139 MFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-E-NKPRGILTSKDILMRVISQNLPADSTLVEKVMT 216 (369)
Q Consensus 139 ~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~-~~~~Giit~~dll~~~~~~~~~~~~~~v~~~m~ 216 (369)
+...+++++|+++.+++++++++++.+|++.|.+++++++||++ + |+++|++|.+|+++.+.... ..++.++|
T Consensus 20 l~~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~~----~~~v~~~m- 94 (148)
T 3lv9_A 20 FEEKKIREIMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCRKNKDDILGFVHIRDLYNQKINEN----KIELEEIL- 94 (148)
T ss_dssp GGTCBGGGTSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEESSSTTSEEEEEEHHHHHHHHHHHS----CCCGGGTC-
T ss_pred cCCCCHHHccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhcCC----CccHHHhc-
Confidence 45678999999766899999999999999999999999999999 5 89999999999984443332 56899999
Q ss_pred cCCceecCCCCHHHHHHHHHhCCCceeeEEcCCCcEEEEEeHHHHHHHHHHHh
Q 017536 217 PNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATV 269 (369)
Q Consensus 217 ~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~di~~~~~~~~ 269 (369)
++++++++++++.+|++.|.+++.+++||+|++|+++|+||..|+++++++++
T Consensus 95 ~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l~~~i 147 (148)
T 3lv9_A 95 RDIIYISENLTIDKALERIRKEKLQLAIVVDEYGGTSGVVTIEDILEEIVGEI 147 (148)
T ss_dssp BCCEEEETTSBHHHHHHHHHHHTCSEEEEECTTSSEEEEEEHHHHHHHHHHTC
T ss_pred CCCeEECCCCCHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhCcC
Confidence 89999999999999999999999999999999999999999999999998865
No 18
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.86 E-value=1.1e-21 Score=155.30 Aligned_cols=125 Identities=15% Similarity=0.178 Sum_probs=109.6
Q ss_pred hCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-C-CEEEEEeehHHHHHHHHhcCCCccccccccccc
Q 017536 139 MFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-E-NKPRGILTSKDILMRVISQNLPADSTLVEKVMT 216 (369)
Q Consensus 139 ~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~-~~~~Giit~~dll~~~~~~~~~~~~~~v~~~m~ 216 (369)
+...+++++|+++..++++++++++.+|++.|.+++++++||++ + ++++|++|.+|++ +....+.. ..++.++|
T Consensus 3 l~~~~v~~iM~~~~~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~-~~~~~~~~--~~~v~~~m- 78 (130)
T 3i8n_A 3 AQDVPVTQVMTPRPVVFRVDATMTINEFLDKHKDTPFSRPLVYSEQKDNIIGFVHRLELF-KMQQSGSG--QKQLGAVM- 78 (130)
T ss_dssp ----CCTTTSCCBCCCCEEETTSBHHHHHHHTTTCSCSCCEEESSSTTCEEEECCHHHHH-HHHHTTTT--TSBHHHHS-
T ss_pred cCcCCHhhCCCcHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCcEEEEEEHHHHH-HHHhcCCC--cCCHHHHh-
Confidence 34567999999877788999999999999999999999999998 5 8999999999998 54443332 57899999
Q ss_pred cCCceecCCCCHHHHHHHHHhCCCceeeEEcCCCcEEEEEeHHHHHHHHHH
Q 017536 217 PNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267 (369)
Q Consensus 217 ~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~di~~~~~~ 267 (369)
++++++++++++.+|++.|.+++.+++||+|++|+++|+||..|+++++++
T Consensus 79 ~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~vGivt~~dil~~l~g 129 (130)
T 3i8n_A 79 RPIQVVLNNTALPKVFDQMMTHRLQLALVVDEYGTVLGLVTLEDIFEHLVG 129 (130)
T ss_dssp EECCEEETTSCHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHHHT
T ss_pred cCCcCcCCCCcHHHHHHHHHHcCCeEEEEEcCCCCEEEEEEHHHHHHHHcC
Confidence 578999999999999999999999999999999999999999999998875
No 19
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.86 E-value=2.1e-21 Score=153.40 Aligned_cols=123 Identities=15% Similarity=0.186 Sum_probs=109.8
Q ss_pred CCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-C-CEEEEEeehHHHHHHHHhcCCCccccccccccccC
Q 017536 141 RPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-E-NKPRGILTSKDILMRVISQNLPADSTLVEKVMTPN 218 (369)
Q Consensus 141 ~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~-~~~~Giit~~dll~~~~~~~~~~~~~~v~~~m~~~ 218 (369)
..+++++|+|+.+++++++++++.+|++.|.+++++++||++ + ++++|++|.+|++ +.... ...++.++|. +
T Consensus 4 ~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~-~~~~~----~~~~v~~~m~-~ 77 (129)
T 3jtf_A 4 ERTVADIMVPRSRMDLLDISQPLPQLLATIIETAHSRFPVYEDDRDNIIGILLAKDLL-RYMLE----PALDIRSLVR-P 77 (129)
T ss_dssp CCBHHHHCEEGGGCCCEETTSCHHHHHHHHHHSCCSEEEEESSSTTCEEEEEEGGGGG-GGGTC----TTSCGGGGCB-C
T ss_pred CCCHHHhCccHHHeEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCcEEEEEEHHHHH-hHhcc----CCcCHHHHhC-C
Confidence 457899999877889999999999999999999999999998 4 8999999999997 44332 2568999994 6
Q ss_pred CceecCCCCHHHHHHHHHhCCCceeeEEcCCCcEEEEEeHHHHHHHHHHHh
Q 017536 219 PECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATV 269 (369)
Q Consensus 219 ~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~di~~~~~~~~ 269 (369)
++++++++++.+|++.|.+++.+++||+|++|+++|+||..|+++++++++
T Consensus 78 ~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~g~~~Giit~~Dil~~l~gei 128 (129)
T 3jtf_A 78 AVFIPEVKRLNVLLREFRASRNHLAIVIDEHGGISGLVTMEDVLEQIVGDI 128 (129)
T ss_dssp CCEEETTCBHHHHHHHHHTSSCCEEEEECC-CCEEEEEEHHHHHHHHHHTC
T ss_pred CeEeCCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhCCC
Confidence 899999999999999999999999999999999999999999999998865
No 20
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.85 E-value=2.2e-21 Score=157.99 Aligned_cols=131 Identities=15% Similarity=0.164 Sum_probs=111.7
Q ss_pred hCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEE-e--CCEEEEEeehHHHHHHHHhcCCCcccccccccc
Q 017536 139 MFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVT-V--ENKPRGILTSKDILMRVISQNLPADSTLVEKVM 215 (369)
Q Consensus 139 ~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~-d--~~~~~Giit~~dll~~~~~~~~~~~~~~v~~~m 215 (369)
+...+++++|+++.+++++++++++.+|++.|.+++++++||+ + +|+++|++|.+|+++.+.... ..++.++|
T Consensus 17 l~~~~v~~iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d~~~~~lvGivt~~dl~~~~~~~~----~~~v~~~m 92 (153)
T 3oco_A 17 MNDKVASDVMVDRTSMSVVDVDETIADALLLYLEEQYSRFPVTADNDKDKIIGYAYNYDIVRQARIDD----KAKISTIM 92 (153)
T ss_dssp HHHCBHHHHSEEGGGCCCEETTSBHHHHHHHHHHHCCSEEEEEETTEEEEEEEEEEHHHHHHHHHHHT----TSBGGGTC
T ss_pred cCCCEeeeEecchhheEEEcCCCCHHHHHHHHHhCCCCEEEEEECCCCCcEEEEEEHHHHHhHHhcCC----CCcHHHHh
Confidence 3446799999965689999999999999999999999999999 5 489999999999984443332 56899999
Q ss_pred ccCCceecCCCCHHHHHHHHHhCCCceeeEEcCCCcEEEEEeHHHHHHHHHHHhcCCCC
Q 017536 216 TPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATVGNTAG 274 (369)
Q Consensus 216 ~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~di~~~~~~~~~~~~~ 274 (369)
++++++++++++.+|++.|.+++.+++||+|++|+++|+||..||++++++++.++.+
T Consensus 93 -~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~g~~vGivt~~dil~~l~~~~~de~~ 150 (153)
T 3oco_A 93 -RDIVSVPENMKVPDVMEEMSAHRVPMAIVIDEYGGTSGIITDKDVYEELFGNLRDEQD 150 (153)
T ss_dssp -BCCEEEETTSBHHHHHHHHHHTTCSCEEEECTTSCEEEEECHHHHHHHHHC-------
T ss_pred -CCCeEECCCCCHHHHHHHHHHcCCcEEEEEeCCCCEEEEeeHHHHHHHHhccCCCccc
Confidence 8999999999999999999999999999999999999999999999999998876654
No 21
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.85 E-value=5.3e-21 Score=158.89 Aligned_cols=132 Identities=14% Similarity=0.146 Sum_probs=116.3
Q ss_pred HhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-C-CEEEEEeehHHHHHHHHhcCCCcccccccccc
Q 017536 138 RMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-E-NKPRGILTSKDILMRVISQNLPADSTLVEKVM 215 (369)
Q Consensus 138 ~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~-~~~~Giit~~dll~~~~~~~~~~~~~~v~~~m 215 (369)
.+...+++++|+|+.+++++++++++.+|++.|.+++++++||++ + ++++|+||.+|++...... . ..++. |
T Consensus 32 ~l~~~~v~diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~lvGivt~~Dl~~~~~~~-~---~~~v~--~ 105 (173)
T 3ocm_A 32 TLAERSIRSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDLVADLITE-G---RVRRN--R 105 (173)
T ss_dssp HHTTSCSTTTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEESSSTTSEEEEEEHHHHHHHHHHH-S---SCCGG--G
T ss_pred ccCCCCHHHhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeCCCCCEEEEEEHHHHHHHHhcC-C---cchhH--h
Confidence 356788999999767899999999999999999999999999998 5 7999999999998443332 1 45677 4
Q ss_pred ccCCceecCCCCHHHHHHHHHhCCCceeeEEcCCCcEEEEEeHHHHHHHHHHHhcCCCCC
Q 017536 216 TPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATVGNTAGS 275 (369)
Q Consensus 216 ~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~di~~~~~~~~~~~~~~ 275 (369)
.++++++++++++.+|++.|.+++.+.+||+|++|+++|+||..||++++++++.++.+.
T Consensus 106 ~~~~~~v~~~~~l~~al~~m~~~~~~~~~Vvde~g~lvGiIT~~Dil~~l~~~i~de~~~ 165 (173)
T 3ocm_A 106 LRDPIIVHESIGILRLMDTLKRSRGQLVLVADEFGAIEGLVTPIDVFEAIAGEFPDEDEL 165 (173)
T ss_dssp SBCCCEECGGGCHHHHHHHHHHSTTCCEEEECTTCCEEEEECHHHHHHHHHCCCCCTTSC
T ss_pred cCCCeEECCCCcHHHHHHHHHHcCCeEEEEEeCCCCEEEEEeHHHHHHHHhCcCCCcccc
Confidence 478899999999999999999999999999999999999999999999999988776653
No 22
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.85 E-value=2.4e-21 Score=152.67 Aligned_cols=122 Identities=19% Similarity=0.269 Sum_probs=107.0
Q ss_pred CCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-C-CEEEEEeehHHHHHHHHhcCCCccccccccccccCC
Q 017536 142 PSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-E-NKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNP 219 (369)
Q Consensus 142 ~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~-~~~~Giit~~dll~~~~~~~~~~~~~~v~~~m~~~~ 219 (369)
.+++++|.++.+++++++++++.+|++.|.+++++++||++ + |+++|++|.+|++ +.+.... ...+++++|. ++
T Consensus 3 ~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~-~~~~~~~--~~~~v~~~m~-~~ 78 (127)
T 3nqr_A 3 QRVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISEDKDHIEGILMAKDLL-PFMRSDA--EAFSMDKVLR-TA 78 (127)
T ss_dssp CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGG-GGGSTTC--CCCCHHHHCB-CC
T ss_pred cCHHHhcccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHH-HHHhccC--CCCCHHHHcC-CC
Confidence 46889999655699999999999999999999999999999 5 7999999999997 4443222 2678999994 58
Q ss_pred ceecCCCCHHHHHHHHHhCCCceeeEEcCCCcEEEEEeHHHHHHHHHH
Q 017536 220 ECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267 (369)
Q Consensus 220 ~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~di~~~~~~ 267 (369)
+++++++++.+|++.|.+++.+++||+|++|+++|+||..|+++++++
T Consensus 79 ~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Giit~~dll~~l~g 126 (127)
T 3nqr_A 79 VVVPESKRVDRMLKEFRSQRYHMAIVIDEFGGVSGLVTIEDILELIVG 126 (127)
T ss_dssp CEEETTCBHHHHHHHHHHTTCCEEEEECTTSCEEEEEEHHHHHHHC--
T ss_pred eEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhC
Confidence 899999999999999999999999999999999999999999998765
No 23
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.84 E-value=1.7e-21 Score=161.57 Aligned_cols=128 Identities=23% Similarity=0.242 Sum_probs=110.0
Q ss_pred HHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-CCEEEEEeehHHHHHHHHhcCC----------
Q 017536 136 RERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNL---------- 204 (369)
Q Consensus 136 ~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~~~~~Giit~~dll~~~~~~~~---------- 204 (369)
...+...+++++|+ ++++++++++++.+|++.|.+++++++||+| +|+++|+||.+|+++ ......
T Consensus 12 ~~~l~~~~V~diM~--~~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dll~-~~~~~~~~~~~~~~~~ 88 (170)
T 4esy_A 12 ARAIRQVPIRDILT--SPVVTVREDDTLDAVAKTMLEHQIGCAPVVDQNGHLVGIITESDFLR-GSIPFWIYEASEILSR 88 (170)
T ss_dssp HHHHHTSBGGGGCC--SCCCCEETTSBHHHHHHHHHHTTCSEEEEECTTSCEEEEEEGGGGGG-GTCCTTHHHHHHHHTT
T ss_pred HHHHcCCCHHHhcC--CCCcEECCcCcHHHHHHHHHHcCCeEEEEEcCCccEEEEEEHHHHHH-HHhhccccchhhhhhh
Confidence 33455678999998 6899999999999999999999999999998 899999999999972 211110
Q ss_pred ------------CccccccccccccCCceecCCCCHHHHHHHHHhCCCceeeEEcCCCcEEEEEeHHHHHHHHHH
Q 017536 205 ------------PADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267 (369)
Q Consensus 205 ------------~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~di~~~~~~ 267 (369)
.....+++++|+++++++++++++.+|+++|.+++++++||+| +|+++|+||..||+++++.
T Consensus 89 ~~~~~~~~~~~~~~~~~~v~~im~~~~~tv~~~~~l~~a~~~m~~~~~~~lpVvd-~g~lvGivt~~Dil~~l~~ 162 (170)
T 4esy_A 89 AIPAPEVEHLFETGRKLTASAVMTQPVVTAAPEDSVGSIADQMRRHGIHRIPVVQ-DGVPVGIVTRRDLLKLLLL 162 (170)
T ss_dssp TSCHHHHHHHHHHHTTCBHHHHCBCCSCCBCTTSBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHTTTSCC
T ss_pred ccchhhHHhhhccccccchhhhcccCcccCCcchhHHHHHHHHHHcCCcEEEEEE-CCEEEEEEEHHHHHHHHHh
Confidence 0114578999999999999999999999999999999999998 6999999999999986643
No 24
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.84 E-value=2.5e-21 Score=160.57 Aligned_cols=143 Identities=23% Similarity=0.312 Sum_probs=114.4
Q ss_pred CcccccccccccCCeEEeCCCcHHHHHHHHHhCCCeEeeEee-CCeEEEEEehHHHHHHHHHHHHHHHhhhhHHHHHHHh
Q 017536 38 LEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEG 116 (369)
Q Consensus 38 ~~~~~v~dim~~~~i~v~~~~~l~~a~~~m~~~~~~~lpVvd-~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~~ 116 (369)
+.+.+|+|+|+++++++.+++++.+|++.|.+++++++||+| +|+++|++|..|+++............
T Consensus 15 l~~~~V~diM~~~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dll~~~~~~~~~~~~~---------- 84 (170)
T 4esy_A 15 IRQVPIRDILTSPVVTVREDDTLDAVAKTMLEHQIGCAPVVDQNGHLVGIITESDFLRGSIPFWIYEASE---------- 84 (170)
T ss_dssp HHTSBGGGGCCSCCCCEETTSBHHHHHHHHHHTTCSEEEEECTTSCEEEEEEGGGGGGGTCCTTHHHHHH----------
T ss_pred HcCCCHHHhcCCCCcEECCcCcHHHHHHHHHHcCCeEEEEEcCCccEEEEEEHHHHHHHHhhccccchhh----------
Confidence 346899999999999999999999999999999999999998 799999999999986532211100000
Q ss_pred HHHhcCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEeCCEEEEEeehHHHH
Q 017536 117 VEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDIL 196 (369)
Q Consensus 117 ~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d~~~~~Giit~~dll 196 (369)
. ..............+.....+++++|+ ++++++++++++.+|+++|.+++++++||+++|+++|+||.+|++
T Consensus 85 ---~--~~~~~~~~~~~~~~~~~~~~~v~~im~--~~~~tv~~~~~l~~a~~~m~~~~~~~lpVvd~g~lvGivt~~Dil 157 (170)
T 4esy_A 85 ---I--LSRAIPAPEVEHLFETGRKLTASAVMT--QPVVTAAPEDSVGSIADQMRRHGIHRIPVVQDGVPVGIVTRRDLL 157 (170)
T ss_dssp ---H--HTTTSCHHHHHHHHHHHTTCBHHHHCB--CCSCCBCTTSBHHHHHHHHHHTTCSEEEEEETTEEEEEEEHHHHT
T ss_pred ---h--hhhccchhhHHhhhccccccchhhhcc--cCcccCCcchhHHHHHHHHHHcCCcEEEEEECCEEEEEEEHHHHH
Confidence 0 000111223344455667788999998 689999999999999999999999999999999999999999998
Q ss_pred H
Q 017536 197 M 197 (369)
Q Consensus 197 ~ 197 (369)
+
T Consensus 158 ~ 158 (170)
T 4esy_A 158 K 158 (170)
T ss_dssp T
T ss_pred H
Confidence 3
No 25
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.83 E-value=1.2e-19 Score=143.84 Aligned_cols=125 Identities=28% Similarity=0.410 Sum_probs=112.3
Q ss_pred CCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEeCCEEEEEeehHHHHHHHHhcCCCccccccccccccCCc
Q 017536 141 RPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPE 220 (369)
Q Consensus 141 ~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d~~~~~Giit~~dll~~~~~~~~~~~~~~v~~~m~~~~~ 220 (369)
..+++++|. ++++++++++++.+|++.|.+++++++||+++|+++|++|.+|++ +.+..+.. ...++.++|.+++.
T Consensus 3 ~~~v~~im~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~Givt~~dl~-~~~~~~~~-~~~~v~~~~~~~~~ 78 (133)
T 2ef7_A 3 EEIVKEYMK--TQVISVTKDAKLNDIAKVMTEKNIGSVIVVDGNKPVGIITERDIV-KAIGKGKS-LETKAEEFMTASLI 78 (133)
T ss_dssp CCBGGGTSB--CSCCEEETTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHH-HHHHTTCC-TTCBGGGTSEECCC
T ss_pred cccHHHhcc--CCCEEECCCCcHHHHHHHHHhcCCCEEEEEECCEEEEEEcHHHHH-HHHhcCCC-cccCHHHHcCCCCE
Confidence 457899998 468999999999999999999999999999988999999999997 55544332 25789999999999
Q ss_pred eecCCCCHHHHHHHHHhCCCceeeEEcCCCcEEEEEeHHHHHHHHHHHh
Q 017536 221 CATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATV 269 (369)
Q Consensus 221 ~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~di~~~~~~~~ 269 (369)
++++++++.++++.|.+++.+++||+|++|+++|+||..|+++++....
T Consensus 79 ~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~~~~ 127 (133)
T 2ef7_A 79 TIREDSPITGALALMRQFNIRHLPVVDDKGNLKGIISIRDITRAIDDMF 127 (133)
T ss_dssp CEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHC
T ss_pred EECCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999877655
No 26
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.82 E-value=5.4e-20 Score=145.02 Aligned_cols=123 Identities=13% Similarity=0.081 Sum_probs=109.5
Q ss_pred CCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEeCCEEEEEeehHHHHHHHHhcCCCccccccccccccCCc
Q 017536 141 RPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPE 220 (369)
Q Consensus 141 ~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d~~~~~Giit~~dll~~~~~~~~~~~~~~v~~~m~~~~~ 220 (369)
..+++++|. ++++++++++++.+|++.|.+++++++||+++|+++|++|.+|++ +....+.. ...+++++|.+++.
T Consensus 4 s~~v~~~m~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~Givt~~dl~-~~~~~~~~-~~~~v~~~m~~~~~ 79 (128)
T 3gby_A 4 SVTFSYLAE--TDYPVFTLGGSTADAARRLAASGCACAPVLDGERYLGMVHLSRLL-EGRKGWPT-VKEKLGEELLETVR 79 (128)
T ss_dssp TCBGGGGCB--CCSCCEETTSBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHH-TTCSSSCC-TTCBCCGGGCBCCC
T ss_pred ceEHHHhhc--CCcceECCCCCHHHHHHHHHHCCCcEEEEEECCEEEEEEEHHHHH-HHHhhCCc-ccCcHHHHccCCCc
Confidence 457899998 679999999999999999999999999999999999999999997 44433322 13679999999999
Q ss_pred eecCCCCHHHHHHHHHhCCCceeeEEcCCCcEEEEEeHHHHHHHHHH
Q 017536 221 CATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267 (369)
Q Consensus 221 ~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~di~~~~~~ 267 (369)
++++++++.++++.|.+++.+++||+|++|+++|+||..|+++++..
T Consensus 80 ~v~~~~~l~~~~~~~~~~~~~~lpVvd~~g~~~Giit~~dll~~l~~ 126 (128)
T 3gby_A 80 SYRPGEQLFDNLISVAAAKCSVVPLADEDGRYEGVVSRKRILGFLAE 126 (128)
T ss_dssp CBCTTSBGGGSHHHHHHCSSSEEEEECTTCBEEEEEEHHHHHHHHHT
T ss_pred EECCCCCHHHHHHHHHhCCCcEEEEECCCCCEEEEEEHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999987643
No 27
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.82 E-value=7.1e-20 Score=145.68 Aligned_cols=124 Identities=27% Similarity=0.464 Sum_probs=110.2
Q ss_pred CccccccCC-CceeEeCCCCcHHHHHHHHHHcCCceEEEEeCCEEEEEeehHHHHHHHHhcCCCccccccccccccCCce
Q 017536 143 SLSTIIPEK-SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPEC 221 (369)
Q Consensus 143 ~v~~im~~~-~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d~~~~~Giit~~dll~~~~~~~~~~~~~~v~~~m~~~~~~ 221 (369)
+++++|.|+ ++++++++++++.+|++.|.+++++++||+++|+++|++|.+|+++.+...+......++.++|.+++.+
T Consensus 7 ~v~~im~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~~~~~ 86 (135)
T 2rc3_A 7 TVKHLLQEKGHTVVAIGPDDSVFNAMQKMAADNIGALLVMKDEKLVGILTERDFSRKSYLLDKPVKDTQVKEIMTRQVAY 86 (135)
T ss_dssp BHHHHHHHHCCCCCEECTTSBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHHGGGSSSCGGGSBGGGTSBCSCCC
T ss_pred eHHHHHhcCCCCcEEECCCCcHHHHHHHHHhcCCCEEEEEECCEEEEEEehHHHHHHHHHcCCCcccCCHHHhccCCCeE
Confidence 578888743 5789999999999999999999999999999899999999999974455444334477899999999999
Q ss_pred ecCCCCHHHHHHHHHhCCCceeeEEcCCCcEEEEEeHHHHHHHHHH
Q 017536 222 ATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267 (369)
Q Consensus 222 v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~di~~~~~~ 267 (369)
+++++++.+|++.|.+++.+++||+| +|+++|+||..|+++++..
T Consensus 87 v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Giit~~dll~~~~~ 131 (135)
T 2rc3_A 87 VDLNNTNEDCMALITEMRVRHLPVLD-DGKVIGLLSIGDLVKDAIS 131 (135)
T ss_dssp BCTTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHC
T ss_pred ECCCCcHHHHHHHHHHhCCCEEEEEe-CCEEEEEEEHHHHHHHHHh
Confidence 99999999999999999999999999 7999999999999997754
No 28
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.82 E-value=8.7e-20 Score=148.94 Aligned_cols=132 Identities=19% Similarity=0.243 Sum_probs=113.3
Q ss_pred hCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-CCEEEEEeehHHHHHHHHhcCCC---ccccccccc
Q 017536 139 MFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLP---ADSTLVEKV 214 (369)
Q Consensus 139 ~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~~~~~Giit~~dll~~~~~~~~~---~~~~~v~~~ 214 (369)
+...+++++|+|..+++++++++++.+|++.|.+++++++||++ +|+++|++|.+|+++........ ....++.++
T Consensus 12 l~~~~v~dim~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~~~~~~~~~~~~~~~~v~~~ 91 (156)
T 3ctu_A 12 FLLGQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEHDLSQEIMADTDIVHM 91 (156)
T ss_dssp HHHTTGGGGEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEECC-CBEEEEEEHHHHHHHHHHHTCCHHHHTTSBGGGG
T ss_pred HHHHHHHHHcCcccCceEECCCCCHHHHHHHHHHCCCceEeEECCCCEEEEEEcHHHHHHHHHhccccccccccCcHHHh
Confidence 44567999999877899999999999999999999999999998 89999999999998444332211 115689999
Q ss_pred cccCCceecCCCCHHHHHHHHHhCCCceeeEEcCCCcEEEEEeHHHHHHHHHHHhcCC
Q 017536 215 MTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATVGNT 272 (369)
Q Consensus 215 m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~di~~~~~~~~~~~ 272 (369)
|.++++++++++++.+|++.|.+++ ++||+|++|+++|+||..||++++...+.+.
T Consensus 92 m~~~~~~v~~~~~l~~a~~~~~~~~--~lpVvd~~g~~~Giit~~dil~~l~~~~~~~ 147 (156)
T 3ctu_A 92 TKTDVAVVSPDFTITEVLHKLVDES--FLPVVDAEGIFQGIITRKSILKAVNALLHDF 147 (156)
T ss_dssp CBCSCCCBCSSCCHHHHHHHTTTSS--EEEEECTTSBEEEEEETTHHHHHHHHHSCC-
T ss_pred ccCCceeeCCCCcHHHHHHHHHHcC--eEEEEcCCCeEEEEEEHHHHHHHHHHHHHhh
Confidence 9999999999999999999999886 6999999999999999999999988877543
No 29
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.82 E-value=4.2e-19 Score=145.38 Aligned_cols=134 Identities=20% Similarity=0.222 Sum_probs=117.1
Q ss_pred HHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-CCEEEEEeehHHHHHHHHhcCCCccccccc
Q 017536 134 TLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVE 212 (369)
Q Consensus 134 ~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~~~~~Giit~~dll~~~~~~~~~~~~~~v~ 212 (369)
.+...+...+++++|.+ ++++++++++.+|++.|.+++++++||++ +|+++|++|.+|++ +.+.........++.
T Consensus 9 ~l~~~l~~~~v~~im~~---~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~-~~~~~~~~~~~~~v~ 84 (159)
T 3fv6_A 9 LLADKLKKLQVKDFQSI---PVVIHENVSVYDAICTMFLEDVGTLFVVDRDAVLVGVLSRKDLL-RASIGQQELTSVPVH 84 (159)
T ss_dssp HHHHHHTTCBGGGSCBC---CCEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHH-HHHTSCSCTTTCBGG
T ss_pred HHHHHHhhCCHHHHcCC---CEEECCCCcHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHH-HHhhccCcccCcCHH
Confidence 35566778899999983 55999999999999999999999999999 89999999999997 544333333467999
Q ss_pred ccccc--CCceecCCCCHHHHHHHHHhCCCceeeEEcCCC---cEEEEEeHHHHHHHHHHHhcC
Q 017536 213 KVMTP--NPECATIDTPIVDALHIMHDGKFLHLPVVDRDG---DVVDVVDVIHITHAAVATVGN 271 (369)
Q Consensus 213 ~~m~~--~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g---~~~Givt~~di~~~~~~~~~~ 271 (369)
++|.+ +++++++++++.+|++.|.+++++++||+|++| +++|+||..||++++......
T Consensus 85 ~~m~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~~~vGiit~~dil~~l~~~~~~ 148 (159)
T 3fv6_A 85 IIMTRMPNITVCRREDYVMDIAKHLIEKQIDALPVIKDTDKGFEVIGRVTKTNMTKILVSLSEN 148 (159)
T ss_dssp GTSEETTSCCCBCTTSBHHHHHHHHHHHTCSEEEEEEECSSSEEEEEEEEHHHHHHHHHHHHTT
T ss_pred HHHcCCCCcEEECCCCCHHHHHHHHHHcCCcEEEEEeCCCcceeEEEEEEHHHHHHHHHHHhhc
Confidence 99988 899999999999999999999999999999888 999999999999988765543
No 30
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.81 E-value=2.4e-19 Score=157.59 Aligned_cols=218 Identities=17% Similarity=0.219 Sum_probs=140.3
Q ss_pred ccccccccccCCeEEeCCCcHHHHHHHHHhCCCeEeeEee-CCeEEEEEehHHHHHHHHHHHHHH--HhhhhHHHHHHHh
Q 017536 40 ETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERA--AEKGKAIAAAVEG 116 (369)
Q Consensus 40 ~~~v~dim~~~~i~v~~~~~l~~a~~~m~~~~~~~lpVvd-~~~~vGiv~~~dil~~~~~~~~~~--~~~~~~~~~~~~~ 116 (369)
..+|+++|+++++++.+++++.+|+++|.+++++++||+| +|+++|+++..|+++......... ......+......
T Consensus 6 ~~~v~~im~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~~~l~Giit~~di~~~~~~~~~~~~~~~~~~~~~~v~~~ 85 (245)
T 3l2b_A 6 KLKVEDLEMDKIAPLAPEVSLKMAWNIMRDKNLKSIPVADGNNHLLGMLSTSNITATYMDIWDSNILAKSATSLDNILDT 85 (245)
T ss_dssp CCBGGGSCCBCCCCBCTTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHHHHHHCCCCTTHHHHTTCCHHHHHHH
T ss_pred cCcHHHhcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHHhhhhhhhhhccCCHHHHHHH
Confidence 5789999999999999999999999999999999999999 699999999999988754211000 0000000000000
Q ss_pred HHHhcCCCCCChhhHHHHH-HHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEeCC-----------
Q 017536 117 VEKHWGTSISGPNTFIETL-RERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVEN----------- 184 (369)
Q Consensus 117 ~~~~~g~~~~~~~~~~~~~-~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d~~----------- 184 (369)
.....-.+..........+ ...+....+.+.+.+ ..++.+.. -.++...+.+.+.++++++.+.
T Consensus 86 l~~~~l~~~~~~~~~~g~~~i~a~~~~~~~~~~~~-~~ivIvgd---r~~~~~~~i~~~~~~liit~~~~~~~~v~~~a~ 161 (245)
T 3l2b_A 86 LSAEAQNINEERKVFPGKVVVAAMQAESLKEFISE-GDIAIAGD---RAEIQAELIELKVSLLIVTGGHTPSKEIIELAK 161 (245)
T ss_dssp TTCEEEECCTTCCCCCSCEEECCSCGGGGGGTCCT-TCEEEECS---CHHHHHHHHHTTCSEEEECTTCCCCHHHHHHHH
T ss_pred hCCEEEeccCCcceeeeeEEEEeCChHHHHhcCCC-CCEEEECC---CHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHH
Confidence 0000000000000000000 000111122334443 44555533 3577888899999999888522
Q ss_pred --EEEEEeehHHHHHHHHhcCCCccccccccccc-cCCceecCCCCHHHHHHHHHhCCCceeeEEcCCCcEEEEEeHHHH
Q 017536 185 --KPRGILTSKDILMRVISQNLPADSTLVEKVMT-PNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHI 261 (369)
Q Consensus 185 --~~~Giit~~dll~~~~~~~~~~~~~~v~~~m~-~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~di 261 (369)
.+..+.|..|.+ ....... ...+++++|+ +++.++++++++.+|+++|.+++++++||+|++|+++|+||..|+
T Consensus 162 ~~~~~~i~t~~d~~-~~~~~~~--~~~~v~~im~~~~~~~~~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl 238 (245)
T 3l2b_A 162 KNNITVITTPHDSF-TASRLIV--QSLPVDYVMTKDNLVAVSTDDLVEDVKVTMSETRYSNYPVIDENNKVVGSIARFHL 238 (245)
T ss_dssp HHTCEEEECSSCHH-HHHHHGG--GGSBHHHHSBCTTCCCEETTSBHHHHHHHHHHHCCSEEEEECTTCBEEEEEECC--
T ss_pred HcCCeEEEeCCChH-HHHHHHh--cCCceeeEecCCccEEECCCCcHHHHHHHHHhcCCceEEEEcCCCeEEEEEEHHHh
Confidence 235567777765 3222111 2568999999 899999999999999999999999999999999999999999999
Q ss_pred HHH
Q 017536 262 THA 264 (369)
Q Consensus 262 ~~~ 264 (369)
+++
T Consensus 239 l~~ 241 (245)
T 3l2b_A 239 IST 241 (245)
T ss_dssp ---
T ss_pred hch
Confidence 974
No 31
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.81 E-value=5.3e-20 Score=151.75 Aligned_cols=132 Identities=21% Similarity=0.343 Sum_probs=113.9
Q ss_pred HhCCCCccccccCC-CceeEeCCCCcHHHHHHHHHHcCCceEEEEe-CCEEEEEeehHHHHHHHHhcCCCcccccccccc
Q 017536 138 RMFRPSLSTIIPEK-SKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEKVM 215 (369)
Q Consensus 138 ~~~~~~v~~im~~~-~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~~~~~Giit~~dll~~~~~~~~~~~~~~v~~~m 215 (369)
.+...+++++|.+. .+++++++++++.+|++.|.+++++++||++ +|+++|++|.+|+++.+..........++.++|
T Consensus 20 ~l~~~~v~dim~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m 99 (165)
T 3fhm_A 20 QGMATFVKDLLDRKGRDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDADGVVLGIFTERDLVKAVAGQGAASLQQSVSVAM 99 (165)
T ss_dssp SSSSCBHHHHHHHHCSCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHGGGGGTSBGGGTS
T ss_pred hhhhcCHHHHhccCCCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEHHHHHHHHHhcCCccccCCHHHHh
Confidence 35567889999852 3699999999999999999999999999999 889999999999985544432233367899999
Q ss_pred ccCCceecCCCCHHHHHHHHHhCCCceeeEEcCCCcEEEEEeHHHHHHHHHHHhc
Q 017536 216 TPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATVG 270 (369)
Q Consensus 216 ~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~di~~~~~~~~~ 270 (369)
.++++++++++++.+|++.|.+++.+++||+|+ |+++|+||..||++++.....
T Consensus 100 ~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g~~~Giit~~dil~~~~~~~~ 153 (165)
T 3fhm_A 100 TKNVVRCQHNSTTDQLMEIMTGGRFRHVPVEEN-GRLAGIISIGDVVKARIGEIE 153 (165)
T ss_dssp BSSCCCBCTTCBHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHHTTCC--
T ss_pred cCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998 999999999999997765543
No 32
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.81 E-value=1.8e-19 Score=141.14 Aligned_cols=120 Identities=22% Similarity=0.235 Sum_probs=108.0
Q ss_pred CccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEeCCEEEEEeehHHHHHHHHhcCCCccccccccccccCCcee
Q 017536 143 SLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECA 222 (369)
Q Consensus 143 ~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d~~~~~Giit~~dll~~~~~~~~~~~~~~v~~~m~~~~~~v 222 (369)
+++++|. ++++++++++++.+|++.|.+++.+++||+++|+++|++|.+|++ +.+..+......++.++|.+++.++
T Consensus 2 ~v~~~m~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~G~it~~dl~-~~~~~~~~~~~~~v~~~m~~~~~~v 78 (125)
T 1pbj_A 2 RVEDVMV--TDVDTIDITASLEDVLRNYVENAKGSSVVVKEGVRVGIVTTWDVL-EAIAEGDDLAEVKVWEVMERDLVTI 78 (125)
T ss_dssp CHHHHCB--CSCCEEETTCBHHHHHHHHHHHCCCEEEEEETTEEEEEEEHHHHH-HHHHHTCCTTTSBHHHHCBCGGGEE
T ss_pred CHHHhcC--CCceEECCCCcHHHHHHHHHHcCCCEEEEEeCCeeEEEEeHHHHH-HHHhcCCcccccCHHHHcCCCCeEE
Confidence 4678887 579999999999999999999999999999999999999999997 5554444434678999999999999
Q ss_pred cCCCCHHHHHHHHHhCCCceeeEEcCCCcEEEEEeHHHHHHHHH
Q 017536 223 TIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266 (369)
Q Consensus 223 ~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~di~~~~~ 266 (369)
++++++.++++.|.+++.+++||+|+ |+++|+||..|+++++.
T Consensus 79 ~~~~~l~~~~~~~~~~~~~~l~Vvd~-~~~~Gvit~~dl~~~l~ 121 (125)
T 1pbj_A 79 SPRATIKEAAEKMVKNVVWRLLVEED-DEIIGVISATDILRAKM 121 (125)
T ss_dssp CTTSCHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHHHC
T ss_pred CCCCCHHHHHHHHHhcCCcEEEEEEC-CEEEEEEEHHHHHHHHH
Confidence 99999999999999999999999998 99999999999998764
No 33
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.81 E-value=2.3e-19 Score=143.22 Aligned_cols=129 Identities=24% Similarity=0.441 Sum_probs=113.9
Q ss_pred hCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-CCEEEEEeehHHHHHHHHhcCCCcccccccccccc
Q 017536 139 MFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTP 217 (369)
Q Consensus 139 ~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~~~~~Giit~~dll~~~~~~~~~~~~~~v~~~m~~ 217 (369)
+...+++++|. ++++++++++++.+|++.|.+++++++||++ +|+++|++|.+|++++++..+. ....++.++|.+
T Consensus 4 l~~~~v~~im~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~-~~~~~v~~~m~~ 80 (138)
T 2yzi_A 4 DMKAPIKVYMT--KKLLGVKPSTSVQEASRLMMEFDVGSLVVINDDGNVVGFFTKSDIIRRVIVPGL-PYDIPVERIMTR 80 (138)
T ss_dssp CTTSBGGGTCB--CCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHTTTTCC-CTTSBGGGTCBC
T ss_pred hhhhhHHHHhc--CCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHhcCC-cccCCHHHHhhC
Confidence 34567999998 6799999999999999999999999999999 8999999999999744544333 236789999999
Q ss_pred CCceecCCCCHHHHHHHHHhCCCceeeEEcCCCcEEEEEeHHHHHHHHHHHhcC
Q 017536 218 NPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATVGN 271 (369)
Q Consensus 218 ~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~di~~~~~~~~~~ 271 (369)
+++++++++++.+|++.|.+++.+++ |+|++|+++|+||..||++++...+..
T Consensus 81 ~~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd~~g~~~Giit~~dil~~~~~~~~~ 133 (138)
T 2yzi_A 81 NLITANVNTPLGEVLRKMAEHRIKHI-LIEEEGKIVGIFTLSDLLEASRRRLET 133 (138)
T ss_dssp SCCEEETTSBHHHHHHHHHHHTCSEE-EEEETTEEEEEEEHHHHHHHHHCCSCC
T ss_pred CCeEECCCCcHHHHHHHHHhcCCCEE-EECCCCCEEEEEEHHHHHHHHHHHHHh
Confidence 99999999999999999999999999 999899999999999999988766543
No 34
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.81 E-value=1.2e-19 Score=147.15 Aligned_cols=129 Identities=18% Similarity=0.166 Sum_probs=112.5
Q ss_pred hCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-CCEEEEEeehHHHHHHHHhcCC-----Cccccccc
Q 017536 139 MFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNL-----PADSTLVE 212 (369)
Q Consensus 139 ~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~~~~~Giit~~dll~~~~~~~~-----~~~~~~v~ 212 (369)
+...+++++|.+..+++++++++++.+|++.|.+++++++||++ +|+++|++|.+|++ +.+.... .....++.
T Consensus 12 l~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~-~~~~~~~~~~~~~~~~~~v~ 90 (150)
T 3lqn_A 12 FQQIFVKDLMISSEKVAHVQIGNGLEHALLVLVKSGYSAIPVLDPMYKLHGLISTAMIL-DGILGLERIEFERLEEMKVE 90 (150)
T ss_dssp HHHCBHHHHSEEGGGSCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHH-HHTBCSSSBCGGGGGGCBGG
T ss_pred hhcCChhhcccCCCceEEECCCCcHHHHHHHHHHcCCcEEEEECCCCCEEEEEEHHHHH-HHHHhhcccchhHHhcCCHH
Confidence 44567999999755799999999999999999999999999999 89999999999997 5443211 12357899
Q ss_pred cccccCCceecCCCCHHHHHHHHHhCCCceeeEEcCCCcEEEEEeHHHHHHHHHHHhc
Q 017536 213 KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATVG 270 (369)
Q Consensus 213 ~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~di~~~~~~~~~ 270 (369)
++|.++++++++++++.+|++.|.++++ +||+|++|+++|+||..||++++...+.
T Consensus 91 ~~m~~~~~~v~~~~~l~~a~~~~~~~~~--l~Vvd~~g~~~Giit~~dil~~l~~~~~ 146 (150)
T 3lqn_A 91 QVMKQDIPVLKLEDSFAKALEMTIDHPF--ICAVNEDGYFEGILTRRAILKLLNKKVR 146 (150)
T ss_dssp GTCBSSCCEEETTCBHHHHHHHHHHCSE--EEEECTTCBEEEEEEHHHHHHHHHHHC-
T ss_pred HHhcCCCceeCCCCCHHHHHHHHHhCCE--EEEECCCCcEEEEEEHHHHHHHHHHHhH
Confidence 9999999999999999999999999987 9999999999999999999998887664
No 35
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.81 E-value=2.2e-19 Score=140.15 Aligned_cols=117 Identities=25% Similarity=0.295 Sum_probs=106.3
Q ss_pred CccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-CCEEEEEeehHHHHHHHHhcCCCccccccccccccCCce
Q 017536 143 SLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPEC 221 (369)
Q Consensus 143 ~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~~~~~Giit~~dll~~~~~~~~~~~~~~v~~~m~~~~~~ 221 (369)
+++++|. ++++++++++++.++++.|.+++++++||++ +|+++|++|.+|++ +.+... ..++.++|.+++.+
T Consensus 2 ~v~~im~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~-~~~~~~----~~~v~~~~~~~~~~ 74 (122)
T 3kpb_A 2 LVKDILS--KPPITAHSNISIMEAAKILIKHNINHLPIVDEHGKLVGIITSWDIA-KALAQN----KKTIEEIMTRNVIT 74 (122)
T ss_dssp BHHHHCC--SCCCCEETTSBHHHHHHHHHHHTCSCEEEECTTSBEEEEECHHHHH-HHHHTT----CCBGGGTSBSSCCC
T ss_pred chHHhhC--CCCEEeCCCCcHHHHHHHHHHcCCCeEEEECCCCCEEEEEEHHHHH-HHHHhc----ccCHHHHhcCCCeE
Confidence 5778898 5788999999999999999999999999999 89999999999997 544433 34899999999999
Q ss_pred ecCCCCHHHHHHHHHhCCCceeeEEcCCCcEEEEEeHHHHHHHHH
Q 017536 222 ATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266 (369)
Q Consensus 222 v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~di~~~~~ 266 (369)
+++++++.++++.|.+++.+++||+|++|+++|+||..|+++++.
T Consensus 75 v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Givt~~dl~~~l~ 119 (122)
T 3kpb_A 75 AHEDEPVDHVAIKMSKYNISGVPVVDDYRRVVGIVTSEDISRLFG 119 (122)
T ss_dssp EETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHC
T ss_pred ECCCCCHHHHHHHHHHhCCCeEEEECCCCCEEEEEeHHHHHHHhh
Confidence 999999999999999999999999999999999999999998654
No 36
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.81 E-value=9.8e-20 Score=148.81 Aligned_cols=131 Identities=23% Similarity=0.370 Sum_probs=114.4
Q ss_pred CCccccccCC----CceeEeCCCCcHHHHHHHHHHcCCceEEEEeCCEEEEEeehHHHHHHHHhcCCCcccccccccccc
Q 017536 142 PSLSTIIPEK----SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTP 217 (369)
Q Consensus 142 ~~v~~im~~~----~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d~~~~~Giit~~dll~~~~~~~~~~~~~~v~~~m~~ 217 (369)
.+++++|.++ ++++++++++++.+|++.|.+++++++||.++|+++|++|.+|+++.+..........++.++|.+
T Consensus 7 ~~v~dim~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~V~~~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~ 86 (157)
T 4fry_A 7 TTVAQILKAKPDSGRTIYTVTKNDFVYDAIKLMAEKGIGALLVVDGDDIAGIVTERDYARKVVLQERSSKATRVEEIMTA 86 (157)
T ss_dssp CBHHHHHHHSTTTTCCCCEEETTSBHHHHHHHHHHHTCSEEEEESSSSEEEEEEHHHHHHHSGGGTCCSSSCBHHHHSBS
T ss_pred HHHHHHHhcccccCCCCeEECCCCcHHHHHHHHHHcCCCEEEEeeCCEEEEEEEHHHHHHHHHhccCCccccCHHHHcCC
Confidence 4588899865 567999999999999999999999999997789999999999998444444433346789999999
Q ss_pred CCceecCCCCHHHHHHHHHhCCCceeeEEcCCCcEEEEEeHHHHHHHHHHHhcCCC
Q 017536 218 NPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATVGNTA 273 (369)
Q Consensus 218 ~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~di~~~~~~~~~~~~ 273 (369)
++.++++++++.+|+++|.+++.+++||+| +|+++|+||..||++++........
T Consensus 87 ~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Giit~~dil~~l~~~~~~~~ 141 (157)
T 4fry_A 87 KVRYVEPSQSTDECMALMTEHRMRHLPVLD-GGKLIGLISIGDLVKSVIADQQFTI 141 (157)
T ss_dssp SCCCBCTTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHTTCCCCC
T ss_pred CCcEECCCCcHHHHHHHHHHcCCCEEEEEE-CCEEEEEEEHHHHHHHHHHHHHhhH
Confidence 999999999999999999999999999999 7999999999999999887665433
No 37
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.81 E-value=3.7e-19 Score=142.60 Aligned_cols=120 Identities=22% Similarity=0.357 Sum_probs=107.6
Q ss_pred CCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-CC--EEEEEeehHHHHHHHHhcCCCccccccccccccC
Q 017536 142 PSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-EN--KPRGILTSKDILMRVISQNLPADSTLVEKVMTPN 218 (369)
Q Consensus 142 ~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~~--~~~Giit~~dll~~~~~~~~~~~~~~v~~~m~~~ 218 (369)
.+++++|. ++++++++++++.+|++.|.+++++++||++ ++ +++|++|.+|++ +.+..+... ..++.++|.++
T Consensus 5 ~~v~~im~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~Givt~~dl~-~~~~~~~~~-~~~v~~~m~~~ 80 (141)
T 2rih_A 5 IRTSELLK--RPPVSLPETATIREVATELAKNRVGLAVLTARDNPKRPVAVVSERDIL-RAVAQRLDL-DGPAMPIANSP 80 (141)
T ss_dssp CBGGGGCC--SCCEEEETTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEEEEHHHHH-HHHHTTCCT-TSBSGGGCBCC
T ss_pred eEHHHHhc--CCCeEeCCCCcHHHHHHHHHHcCCCEEEEEcCCCcceeEEEEEHHHHH-HHHhcCCCC-CCCHHHHcCCC
Confidence 56899998 5799999999999999999999999999999 56 899999999997 554443322 57899999999
Q ss_pred CceecCCCCHHHHHHHHHhCCCceeeEEcCCCcEEEEEeHHHHHHHHH
Q 017536 219 PECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266 (369)
Q Consensus 219 ~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~di~~~~~ 266 (369)
+++++++ ++.+|++.|.+++.+++||+|++|+++|+||..||++++.
T Consensus 81 ~~~v~~~-~l~~a~~~m~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~ 127 (141)
T 2rih_A 81 ITVLDTD-PVHVAAEKMRRHNIRHVVVVNKNGELVGVLSIRDLCFERA 127 (141)
T ss_dssp CEEETTS-BHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHSCHH
T ss_pred CeEEcCC-CHHHHHHHHHHcCCeEEEEEcCCCcEEEEEEHHHHHHHHH
Confidence 9999999 9999999999999999999999999999999999998654
No 38
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.81 E-value=5.9e-20 Score=150.02 Aligned_cols=120 Identities=14% Similarity=0.190 Sum_probs=107.3
Q ss_pred HhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-C-CEEEEEeehHHHHHHHHhcCCCcccccccccc
Q 017536 138 RMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-E-NKPRGILTSKDILMRVISQNLPADSTLVEKVM 215 (369)
Q Consensus 138 ~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~-~~~~Giit~~dll~~~~~~~~~~~~~~v~~~m 215 (369)
.+...+++++|+++.+++++++++++.+|++.|.+++++++||++ + ++++|++|.+|++ +....+ ...++.++|
T Consensus 34 ~l~~~~v~diM~~~~~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~-~~~~~~---~~~~v~~im 109 (156)
T 3oi8_A 34 DFSDLEVRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLL-KYMFNP---EQFHLKSIL 109 (156)
T ss_dssp HHTTCBGGGTCEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGG-GGSSCG---GGCCHHHHC
T ss_pred ccCCCCHhheeeeHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHH-HHHHcC---CcccHHHHc
Confidence 356788999999766899999999999999999999999999998 5 5999999999997 443222 367899999
Q ss_pred ccCCceecCCCCHHHHHHHHHhCCCceeeEEcCCCcEEEEEeHHHHH
Q 017536 216 TPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHIT 262 (369)
Q Consensus 216 ~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~di~ 262 (369)
. +++++++++++.+|++.|.+++.+++||+|++|+++|+||..||+
T Consensus 110 ~-~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~g~~~Givt~~Dil 155 (156)
T 3oi8_A 110 R-PAVFVPEGKSLTALLKEFREQRNHMAIVIDEYGGTSGLVTFEDII 155 (156)
T ss_dssp B-CCCEEETTSBHHHHHHHHHHTTCCEEEEECTTSSEEEEEEHHHHC
T ss_pred C-CCEEECCCCCHHHHHHHHHhcCCeEEEEECCCCCEEEEEEHHHhc
Confidence 5 589999999999999999999999999999999999999999986
No 39
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.80 E-value=3.8e-19 Score=141.89 Aligned_cols=125 Identities=27% Similarity=0.361 Sum_probs=110.3
Q ss_pred hCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-CCEEEEEeehHHH-HHHHHhcCCCccccccccccc
Q 017536 139 MFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDI-LMRVISQNLPADSTLVEKVMT 216 (369)
Q Consensus 139 ~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~~~~~Giit~~dl-l~~~~~~~~~~~~~~v~~~m~ 216 (369)
+...+++++|. +++.++++++++.++++.|.+++.+++||++ +|+++|++|.+|+ + +.+..... ...++.++|.
T Consensus 5 l~~~~v~~im~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~-~~~~~~~~-~~~~v~~~m~ 80 (138)
T 2p9m_A 5 LKNIKVKDVMT--KNVITAKRHEGVVEAFEKMLKYKISSLPVIDDENKVIGIVTTTDIGY-NLIRDKYT-LETTIGDVMT 80 (138)
T ss_dssp CTTCBGGGTSB--CSCCCEETTSBHHHHHHHHHHHTCCEEEEECTTCBEEEEEEHHHHHH-HHTTTCCC-SSCBHHHHSC
T ss_pred cccCCHHHhhc--CCceEECCCCcHHHHHHHHHHCCCcEEEEECCCCeEEEEEEHHHHHH-HHHhhccc-CCcCHHHHhC
Confidence 45678999998 5788999999999999999999999999999 8999999999999 7 44443322 3678999999
Q ss_pred cCCceecCCCCHHHHHHHHHhCC-----CceeeEEcCCCcEEEEEeHHHHHHHHHH
Q 017536 217 PNPECATIDTPIVDALHIMHDGK-----FLHLPVVDRDGDVVDVVDVIHITHAAVA 267 (369)
Q Consensus 217 ~~~~~v~~~~~l~~a~~~~~~~~-----~~~l~Vvd~~g~~~Givt~~di~~~~~~ 267 (369)
+++.++++++++.++++.|.+++ .+++||+|++|+++|+||..|+++++..
T Consensus 81 ~~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~~ 136 (138)
T 2p9m_A 81 KDVITIHEDASILEAIKKMDISGKKEEIINQLPVVDKNNKLVGIISDGDIIRTISK 136 (138)
T ss_dssp SSCCCEETTSBHHHHHHHHTCC-----CCCEEEEECTTSBEEEEEEHHHHHHHHHH
T ss_pred CCcEEECCCCCHHHHHHHHHhcCCccccccEEEEECCCCeEEEEEEHHHHHHHHHh
Confidence 99999999999999999999999 9999999999999999999999987654
No 40
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.80 E-value=2.1e-19 Score=145.51 Aligned_cols=121 Identities=20% Similarity=0.231 Sum_probs=109.5
Q ss_pred CCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-CCEEEEEeehHHHHHHHHhcCCCccccccccccccCC
Q 017536 141 RPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNP 219 (369)
Q Consensus 141 ~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~~~~~Giit~~dll~~~~~~~~~~~~~~v~~~m~~~~ 219 (369)
..+++++|.+..+++++++++++.+|++.|.+++++++||++ +|+++|+||.+|++ +.+..+......++.++|.+++
T Consensus 27 ~~~v~dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~-~~~~~~~~~~~~~v~~~m~~~~ 105 (149)
T 3k2v_A 27 LLRVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDDDMNIIGIFTDGDLR-RVFDTGVDMRDASIADVMTRGG 105 (149)
T ss_dssp TSBGGGTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECTTCBEEEEEEHHHHH-HHHCSSSCCTTCBHHHHSEESC
T ss_pred ccCHHHHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECCCCcEEEEecHHHHH-HHHhcCCCcccCcHHHHcCCCC
Confidence 467999999544899999999999999999999999999999 89999999999997 6665554444789999999999
Q ss_pred ceecCCCCHHHHHHHHHhCCCceeeEEcCCCcEEEEEeHHHHHH
Q 017536 220 ECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITH 263 (369)
Q Consensus 220 ~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~di~~ 263 (369)
+++++++++.+|++.|.+++.+++||+|++ +++|+||..||++
T Consensus 106 ~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-~~~Giit~~dil~ 148 (149)
T 3k2v_A 106 IRIRPGTLAVDALNLMQSRHITCVLVADGD-HLLGVVHMHDLLR 148 (149)
T ss_dssp CEECTTCBHHHHHHHHHHHTCSEEEEEETT-EEEEEEEHHHHTC
T ss_pred eEECCCCCHHHHHHHHHHcCCCEEEEecCC-EEEEEEEHHHhhc
Confidence 999999999999999999999999999965 9999999999975
No 41
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.80 E-value=1.3e-18 Score=140.58 Aligned_cols=136 Identities=18% Similarity=0.337 Sum_probs=107.7
Q ss_pred EEEeHHHHHHHHHhccCCCccccccccccc--CCeEEeCCCcHHHHHHHHHhCCCeEeeEee-C-CeEEEEEehHHHHHH
Q 017536 20 GILTDKDIATRVIARELNLEETPVSKVMTR--NPTFVLSDTLAVEALQKMVQGKFRHLPVVE-N-GEVIALLDIAKCLYD 95 (369)
Q Consensus 20 Givt~~Di~~~~~~~~~~~~~~~v~dim~~--~~i~v~~~~~l~~a~~~m~~~~~~~lpVvd-~-~~~vGiv~~~dil~~ 95 (369)
|.++..+ +..+.....+...+|+++|++ +++++++++++.+|++.|.+++++++||+| + |+++|+++..|++..
T Consensus 4 g~l~~~e--~~~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~ 81 (148)
T 3lv9_A 4 GLIDESE--QRLVDNIFEFEEKKIREIMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCRKNKDDILGFVHIRDLYNQ 81 (148)
T ss_dssp ----------------CGGGTCBGGGTSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEESSSTTSEEEEEEHHHHHHH
T ss_pred CccCHHH--HHHHHHHhccCCCCHHHccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHH
Confidence 5566544 344455567788999999998 999999999999999999999999999998 4 899999999999865
Q ss_pred HHHHHHHHHhhhhHHHHHHHhHHHhcCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCC
Q 017536 96 AIARMERAAEKGKAIAAAVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRL 175 (369)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~ 175 (369)
... ....+++++|. +++++++++++.++++.|.+++.
T Consensus 82 ~~~----------------------------------------~~~~~v~~~m~---~~~~v~~~~~l~~~~~~m~~~~~ 118 (148)
T 3lv9_A 82 KIN----------------------------------------ENKIELEEILR---DIIYISENLTIDKALERIRKEKL 118 (148)
T ss_dssp HHH----------------------------------------HSCCCGGGTCB---CCEEEETTSBHHHHHHHHHHHTC
T ss_pred Hhc----------------------------------------CCCccHHHhcC---CCeEECCCCCHHHHHHHHHhcCC
Confidence 221 01456889994 48899999999999999999999
Q ss_pred ceEEEEe-CCEEEEEeehHHHHHHHH
Q 017536 176 SSAVVTV-ENKPRGILTSKDILMRVI 200 (369)
Q Consensus 176 ~~~~V~d-~~~~~Giit~~dll~~~~ 200 (369)
+.+||++ +|+++|++|..|+++.+.
T Consensus 119 ~~l~Vvd~~g~~~Giit~~dil~~l~ 144 (148)
T 3lv9_A 119 QLAIVVDEYGGTSGVVTIEDILEEIV 144 (148)
T ss_dssp SEEEEECTTSSEEEEEEHHHHHHHHH
T ss_pred eEEEEEeCCCCEEEEEEHHHHHHHHh
Confidence 9999999 799999999999985554
No 42
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.80 E-value=2.2e-19 Score=145.59 Aligned_cols=128 Identities=27% Similarity=0.390 Sum_probs=109.0
Q ss_pred CCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-CCEEEEEeehHHHHHHHHhcC-------------CCc
Q 017536 141 RPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQN-------------LPA 206 (369)
Q Consensus 141 ~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~~~~~Giit~~dll~~~~~~~-------------~~~ 206 (369)
..+++++|.++.+++++++++++.+|++.|.+++++++||++ +++++|++|.+|++ ++.... ...
T Consensus 4 ~~~v~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~-~~~~~~~~~~~~~~~~~~~~~~ 82 (152)
T 4gqw_A 4 VYTVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDEDWKLVGLVSDYDLL-ALDSGDSTWKTFNAVQKLLSKT 82 (152)
T ss_dssp CSBGGGTSEESTTCCCBCTTSBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHT-TCC----CCHHHHHHHTC----
T ss_pred eEEhhhccCCCCCCeEECCCCcHHHHHHHHHHcCCceEEEEeCCCeEEEEEEHHHHH-HhhcccCcccchHHHHHHHHHh
Confidence 356899999655899999999999999999999999999999 78999999999996 321100 112
Q ss_pred cccccccccccCCceecCCCCHHHHHHHHHhCCCceeeEEcCCCcEEEEEeHHHHHHHHHHHh
Q 017536 207 DSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATV 269 (369)
Q Consensus 207 ~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~di~~~~~~~~ 269 (369)
...++.++|.++++++++++++.+|++.|.+++.+++||+|++|+++|+||..||++++....
T Consensus 83 ~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Giit~~dil~~~~~~~ 145 (152)
T 4gqw_A 83 NGKLVGDLMTPAPLVVEEKTNLEDAAKILLETKYRRLPVVDSDGKLVGIITRGNVVRAALQIK 145 (152)
T ss_dssp -CCBHHHHSEESCCCEESSSBHHHHHHHHHHSSCCEEEEECTTSBEEEEEEHHHHHHHHHC--
T ss_pred ccccHHHhcCCCceEECCCCcHHHHHHHHHHCCCCEEEEECCCCcEEEEEEHHHHHHHHHhcc
Confidence 256899999999999999999999999999999999999999999999999999999877544
No 43
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.79 E-value=1e-18 Score=142.64 Aligned_cols=130 Identities=15% Similarity=0.193 Sum_probs=112.1
Q ss_pred hCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-CCEEEEEeehHHHHHHHHhcCC-----Cccccccc
Q 017536 139 MFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNL-----PADSTLVE 212 (369)
Q Consensus 139 ~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~~~~~Giit~~dll~~~~~~~~-----~~~~~~v~ 212 (369)
+...+++++|.+..+++++++++++.+|++.|.+++++++||++ +|+++|++|.+|++ +.+.... .....++.
T Consensus 8 l~~~~v~~im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~-~~~~~~~~~~~~~~~~~~v~ 86 (157)
T 2emq_A 8 FMQMTVKPFLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDTSYKLHGLISMTMMM-DAILGLERIEFERLETMKVE 86 (157)
T ss_dssp --CCBSTTTCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEECTTCCEEEEEEHHHHH-HHSBCSSSBCGGGGGTCBGG
T ss_pred HhhCcHHhhccCCccceEECCCCcHHHHHHHHHHCCceEEEEEcCCCCEEEEeeHHHHH-HHHhcccccchHHhcCCcHH
Confidence 45678999998544799999999999999999999999999999 79999999999997 5443211 12356899
Q ss_pred cccccCCceecCCCCHHHHHHHHHhCCCceeeEEcCCCcEEEEEeHHHHHHHHHHHhcC
Q 017536 213 KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATVGN 271 (369)
Q Consensus 213 ~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~di~~~~~~~~~~ 271 (369)
++|.++++++++++++.+|++.|.++++ +||+|++|+++|+||..||++++......
T Consensus 87 ~~m~~~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd~~g~~~Giit~~dil~~~~~~~~~ 143 (157)
T 2emq_A 87 EVMNRNIPRLRLDDSLMKAVGLIVNHPF--VCVENDDGYFAGIFTRREVLKQLNKQLHR 143 (157)
T ss_dssp GTCBCCCCEEETTSBHHHHHHHHHHSSE--EEEECSSSSEEEEEEHHHHHHHHHHTTCC
T ss_pred HHhCCCCceecCCCcHHHHHHHHhhCCE--EEEEcCCCeEEEEEEHHHHHHHHHHHhhc
Confidence 9999999999999999999999999987 99999999999999999999988876654
No 44
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.79 E-value=1.4e-19 Score=143.47 Aligned_cols=121 Identities=17% Similarity=0.320 Sum_probs=107.7
Q ss_pred CCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-CCEEEEEeehHHHHHHHHhcCCCccccccccccccCCc
Q 017536 142 PSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPE 220 (369)
Q Consensus 142 ~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~~~~~Giit~~dll~~~~~~~~~~~~~~v~~~m~~~~~ 220 (369)
.+++++|. ++++++++++++.++++.|.+++++++||++ +++++|++|.+|++++++..+......++.++|.++++
T Consensus 8 ~~v~~im~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~~~~ 85 (133)
T 1y5h_A 8 TTARDIMN--AGVTCVGEHETLTAAAQYMREHDIGALPICGDDDRLHGMLTDRDIVIKGLAAGLDPNTATAGELARDSIY 85 (133)
T ss_dssp CCHHHHSE--ETCCCEETTSBHHHHHHHHHHHTCSEEEEECGGGBEEEEEEHHHHHHTTGGGTCCTTTSBHHHHHTTCCC
T ss_pred cCHHHHhc--CCceEeCCCCCHHHHHHHHHHhCCCeEEEECCCCeEEEEEeHHHHHHHHHhcCCCccccCHHHHhcCCCE
Confidence 46889998 5788999999999999999999999999997 89999999999997445544433346789999999999
Q ss_pred eecCCCCHHHHHHHHHhCCCceeeEEcCCCcEEEEEeHHHHHHHH
Q 017536 221 CATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAA 265 (369)
Q Consensus 221 ~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~di~~~~ 265 (369)
++++++++.++++.|.+++.+++||+|+ |+++|+||..||++++
T Consensus 86 ~v~~~~~l~~~~~~m~~~~~~~l~Vvd~-g~~~Giit~~dil~~l 129 (133)
T 1y5h_A 86 YVDANASIQEMLNVMEEHQVRRVPVISE-HRLVGIVTEADIARHL 129 (133)
T ss_dssp CEETTCCHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHTC
T ss_pred EECCCCCHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHH
Confidence 9999999999999999999999999997 9999999999999854
No 45
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.79 E-value=6.5e-19 Score=147.13 Aligned_cols=130 Identities=22% Similarity=0.323 Sum_probs=110.9
Q ss_pred CCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-CCEEEEEeehHHHHHHHHhcC-----------------
Q 017536 142 PSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQN----------------- 203 (369)
Q Consensus 142 ~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~~~~~Giit~~dll~~~~~~~----------------- 203 (369)
.+++++|.++.+++++++++++.+|++.|.+++++++||++ +++++|++|.+|+++......
T Consensus 4 ~~v~dim~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (180)
T 3sl7_A 4 YTVGDFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDDNWTLVGVVSDYDLLALDSISGRSQNDTNLFPDVDSTWK 83 (180)
T ss_dssp CBHHHHSEEGGGCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHTCC-------------------CCC
T ss_pred eeHHHhcCCCCCceeeCCCCcHHHHHHHHHHcCCCeEEEECCCCeEEEEEEHHHHHhhhhhccccCCcccccccccchhh
Confidence 35789998544899999999999999999999999999999 899999999999962111000
Q ss_pred ---------CCccccccccccccCCceecCCCCHHHHHHHHHhCCCceeeEEcCCCcEEEEEeHHHHHHHHHHHhcC
Q 017536 204 ---------LPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATVGN 271 (369)
Q Consensus 204 ---------~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~di~~~~~~~~~~ 271 (369)
......++.++|.++++++++++++.+|+++|.+++++++||+|++|+++|+||..||++++......
T Consensus 84 ~~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~~~~~~~~ 160 (180)
T 3sl7_A 84 TFNELQKLISKTYGKVVGDLMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVDADGKLIGILTRGNVVRAALQIKRN 160 (180)
T ss_dssp SHHHHHHHHHTTTTCBHHHHSEESCCCEETTSBHHHHHHHHTTSTTCEEEEECTTCBEEEEEEHHHHHHHHHHHHHT
T ss_pred hhHHHHHHHhccccccHHHHhCCCceEeCCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHHHHhhh
Confidence 01125689999999999999999999999999999999999999999999999999999988776543
No 46
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.79 E-value=2.7e-18 Score=146.39 Aligned_cols=123 Identities=15% Similarity=0.232 Sum_probs=110.8
Q ss_pred hCCCCccccccCCCceeEeCCCCcHHHHHHHHHHc---CCceEEEEe-CCEEEEEeehHHHHHHHHhcCCCccccccccc
Q 017536 139 MFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLEL---RLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEKV 214 (369)
Q Consensus 139 ~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~---~~~~~~V~d-~~~~~Giit~~dll~~~~~~~~~~~~~~v~~~ 214 (369)
+...+++++|+ +++++++++.|+.+|++.|.+. +++.+||++ +++++|++|.+|++ .. ....+++++
T Consensus 51 ~~~~~v~~iM~--~~~~~v~~~~tv~eal~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll-~~------~~~~~v~~i 121 (205)
T 3kxr_A 51 YSENEIGRYTD--HQMLVLSDKATVAQAQRFFRRIELDCNDNLFIVDEADKYLGTVRRYDIF-KH------EPHEPLISL 121 (205)
T ss_dssp SCTTCGGGGCB--CCCCEEETTCBHHHHHHHHHHCCCTTCCEEEEECTTCBEEEEEEHHHHT-TS------CTTSBGGGG
T ss_pred CCcchHHhhcc--CceEEECCCCcHHHHHHHHHhhCccCeeEEEEEcCCCeEEEEEEHHHHH-hC------CCcchHHHH
Confidence 45678999999 5899999999999999999987 789999999 89999999999996 21 125789999
Q ss_pred cccCCceecCCCCHHHHHHHHHhCCCceeeEEcCCCcEEEEEeHHHHHHHHHHHhc
Q 017536 215 MTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATVG 270 (369)
Q Consensus 215 m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~di~~~~~~~~~ 270 (369)
|.++++++++++++.+|++.|.+++++.+||||++|+++|+||..|+++.+..+..
T Consensus 122 m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD~~g~lvGiIT~~Dil~~i~~e~~ 177 (205)
T 3kxr_A 122 LSEDSRALTANTTLLDAAEAIEHSREIELPVIDDAGELIGRVTLRAATALVREHYE 177 (205)
T ss_dssp CCSSCCCEETTSCHHHHHHHHHTSSCSEEEEECTTSBEEEEEEHHHHHHHHHHHHC
T ss_pred hcCCCeEECCCCCHHHHHHHHHhcCCCEEEEEcCCCeEEEEEEHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998766553
No 47
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.78 E-value=1.1e-18 Score=143.02 Aligned_cols=126 Identities=19% Similarity=0.191 Sum_probs=108.8
Q ss_pred CCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-CCEEEEEeehHHHHHHHHhc-------CCCccccccc
Q 017536 141 RPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQ-------NLPADSTLVE 212 (369)
Q Consensus 141 ~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~~~~~Giit~~dll~~~~~~-------~~~~~~~~v~ 212 (369)
..+++++|. ++++++++++++.+|++.|.+++++++||++ +|+++|++|.+|+++.+... .......++.
T Consensus 4 ~~~v~dim~--~~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~~~~v~ 81 (160)
T 2o16_A 4 MIKVEDMMT--RHPHTLLRTHTLNDAKHLMEALDIRHVPIVDANKKLLGIVSQRDLLAAQESSLQRSAQGDSLAFETPLF 81 (160)
T ss_dssp CCBGGGTSE--ESCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHHHCC---------CCCBHH
T ss_pred cCcHHHHhc--CCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHHhhcccccccchhcccCHH
Confidence 356899998 5789999999999999999999999999999 79999999999997443321 1112357899
Q ss_pred cccccCCceecCCCCHHHHHHHHHhCCCceeeEEcCCCcEEEEEeHHHHHHHHHHHh
Q 017536 213 KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATV 269 (369)
Q Consensus 213 ~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~di~~~~~~~~ 269 (369)
++|.++++++++++++.+|++.|.+++.+++||+|+ |+++|+||..||++++...+
T Consensus 82 ~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g~lvGiit~~dil~~~~~~~ 137 (160)
T 2o16_A 82 EVMHTDVTSVAPQAGLKESAIYMQKHKIGCLPVVAK-DVLVGIITDSDFVTIAINLL 137 (160)
T ss_dssp HHSCSCEEEBCTTSBHHHHHHHHHHTTCSCEEEEET-TEEEEEECHHHHHHHHHHHH
T ss_pred HHhcCCCeEECCCCCHHHHHHHHHHhCCCEEEEEEC-CEEEEEEEHHHHHHHHHHHh
Confidence 999999999999999999999999999999999997 99999999999999776544
No 48
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.78 E-value=1.3e-18 Score=139.73 Aligned_cols=124 Identities=15% Similarity=0.172 Sum_probs=105.6
Q ss_pred CCCccc---cccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-CCEEEEEeehHHHHHHHHhcCC-Ccccccccccc
Q 017536 141 RPSLST---IIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNL-PADSTLVEKVM 215 (369)
Q Consensus 141 ~~~v~~---im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~~~~~Giit~~dll~~~~~~~~-~~~~~~v~~~m 215 (369)
..++++ +|. ++++++++++++.+|++.|.+++++++||++ +|+++|++|.+|++ +.+..+. .....++.++|
T Consensus 7 ~~~v~~~~~~~~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~-~~~~~~~~~~~~~~v~~~m 83 (144)
T 2nyc_A 7 KIPIGDLNIITQ--DNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVL-GLIKGGIYNDLSLSVGEAL 83 (144)
T ss_dssp GSBGGGSSCCBC--SSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHH-HHHHTC----CCSBHHHHH
T ss_pred hcchhhcCCCCC--CCceEECCCCcHHHHHHHHHHcCcceeeEEcCCCcEEEEEcHHHHH-HHhcccccccCCccHHHHH
Confidence 456777 776 6789999999999999999999999999999 89999999999997 4443321 22356899999
Q ss_pred cc------CCceecCCCCHHHHHHHHHhCCCceeeEEcCCCcEEEEEeHHHHHHHHHH
Q 017536 216 TP------NPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267 (369)
Q Consensus 216 ~~------~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~di~~~~~~ 267 (369)
.+ ++.++++++++.++++.|.+++.+++||+|++|+++|+||..||++++..
T Consensus 84 ~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l~~ 141 (144)
T 2nyc_A 84 MRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGVLTLSDILKYILL 141 (144)
T ss_dssp HHCC------CEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHH
T ss_pred hcCccccCCCeEECCCCcHHHHHHHHHHCCCCEEEEECCCCCEEEEEEHHHHHHHHHh
Confidence 76 68999999999999999999999999999999999999999999997764
No 49
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.78 E-value=2.7e-18 Score=140.22 Aligned_cols=124 Identities=21% Similarity=0.297 Sum_probs=107.7
Q ss_pred CccccccCCCceeEeCCCCcHHHHHHHHHHcCCce-EEEEeCCEEEEEeehHHHHHHHHhc--------------CCCcc
Q 017536 143 SLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSS-AVVTVENKPRGILTSKDILMRVISQ--------------NLPAD 207 (369)
Q Consensus 143 ~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~-~~V~d~~~~~Giit~~dll~~~~~~--------------~~~~~ 207 (369)
+++++|. ++++++++++++.+|++.|.++++++ +||+++++++|++|.+|+++..... .....
T Consensus 17 ~v~~im~--~~~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~~~~vGivt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (157)
T 1o50_A 17 DVCKLIS--LKPTVVEEDTPIEEIVDRILEDPVTRTVYVARDNKLVGMIPVMHLLKVSGFHFFGFIPKEELIRSSMKRLI 94 (157)
T ss_dssp HHTTSSC--CCCEEECTTCBHHHHHHHHHHSTTCCEEEEEETTEEEEEEEHHHHHHHHHHHHHCCCC-------CCCCCS
T ss_pred cHhhccc--CCCceECCCCCHHHHHHHHHhCCCCccEEEEECCEEEEEEEHHHHHHHHhhhHHhhhccHHHHHHHHHHHc
Confidence 4789998 57999999999999999999999999 9999944999999999998433210 01223
Q ss_pred ccccccccccCCceecCCCCHHHHHHHHHhCCCceeeEEcCCCcEEEEEeHHHHHHHHHHHh
Q 017536 208 STLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATV 269 (369)
Q Consensus 208 ~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~di~~~~~~~~ 269 (369)
..++.++|.+ ++++++++++.+|++.|.+++.+++||+|++|+++|+||..||++++...+
T Consensus 95 ~~~v~~im~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dll~~l~~~~ 155 (157)
T 1o50_A 95 AKNASEIMLD-PVYVHMDTPLEEALKLMIDNNIQEMPVVDEKGEIVGDLNSLEILLALWKGR 155 (157)
T ss_dssp SCBHHHHCBC-CCCBCTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHSC
T ss_pred CCcHHHHcCC-CeEECCCCCHHHHHHHHHHCCCcEEEEEcCCCEEEEEEEHHHHHHHHHHhh
Confidence 6789999998 999999999999999999999999999998999999999999999876543
No 50
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.78 E-value=1.3e-18 Score=142.41 Aligned_cols=130 Identities=14% Similarity=0.177 Sum_probs=112.0
Q ss_pred hCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-CCEEEEEeehHHHHHHHHhcCCC-----ccccccc
Q 017536 139 MFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLP-----ADSTLVE 212 (369)
Q Consensus 139 ~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~~~~~Giit~~dll~~~~~~~~~-----~~~~~v~ 212 (369)
+...+++++|.++.+++++++++++.+|++.|.+++++++||++ +|+++|++|.+|++ ..+..... ....++.
T Consensus 11 l~~~~v~~im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~-~~~~~~~~~~~~~~~~~~v~ 89 (159)
T 1yav_A 11 LLEATVGQFMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDPSYRLHGLIGTNMIM-NSIFGLERIEFEKLDQITVE 89 (159)
T ss_dssp CTTCBHHHHSEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEECTTCBEEEEEEHHHHH-HHHBCSSSBCGGGTTTSBHH
T ss_pred HhHhhHHHHhCCccceEEECCCCcHHHHHHHHHhCCCcEEEEECCCCCEEEEeEHHHHH-HHhhhhcccchhhhccCCHH
Confidence 45678999998534799999999999999999999999999999 78999999999997 55543211 2357899
Q ss_pred cccccCCceecCCCCHHHHHHHHHhCCCceeeEEcCCCcEEEEEeHHHHHHHHHHHhcC
Q 017536 213 KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATVGN 271 (369)
Q Consensus 213 ~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~di~~~~~~~~~~ 271 (369)
++|.+++.++++++++.+|++.|.++++ +||+|++|+++|+||..||++++...+..
T Consensus 90 ~~m~~~~~~v~~~~~l~~a~~~m~~~~~--lpVvd~~g~~vGiit~~dil~~~~~~~~~ 146 (159)
T 1yav_A 90 EVMLTDIPRLHINDPIMKGFGMVINNGF--VCVENDEQVFEGIFTRRVVLKELNKHIRS 146 (159)
T ss_dssp HHSBCSCCEEETTSBHHHHHHHTTTCSE--EEEECTTCBEEEEEEHHHHHHHHHHHC--
T ss_pred HhcCCCCceEcCCCCHHHHHHHHHhCCE--EEEEeCCCeEEEEEEHHHHHHHHHHHHHh
Confidence 9999999999999999999999999877 99999999999999999999988776643
No 51
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.77 E-value=1.8e-18 Score=145.20 Aligned_cols=124 Identities=24% Similarity=0.271 Sum_probs=109.1
Q ss_pred CCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-CCEEEEEeehHHHHHHHHhcCCCccccccccccccCC
Q 017536 141 RPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNP 219 (369)
Q Consensus 141 ~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~~~~~Giit~~dll~~~~~~~~~~~~~~v~~~m~~~~ 219 (369)
..+++++|. ++++++++++++.+|++.|.+++++++||++ +|+++|++|.+|++..+..........++.++|.+++
T Consensus 8 ~~~v~~im~--~~~~~v~~~~~l~ea~~~~~~~~~~~~pVvd~~g~~vGivt~~dl~~~~~~~~~~~~~~~v~~im~~~~ 85 (184)
T 1pvm_A 8 FMRVEKIMN--SNFKTVNWNTTVFDAVKIMNENHLYGLVVKDDNGNDVGLLSERSIIKRFIPRNKKPDEVPIRLVMRKPI 85 (184)
T ss_dssp CCBGGGTSB--TTCCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHTGGGCCCGGGSBGGGTSBSSC
T ss_pred ccCHHHhcC--CCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhhcccCcccCCHHHHhCCCC
Confidence 357999998 6799999999999999999999999999998 7999999999999733332222233678999999999
Q ss_pred ceecCCCCHHHHHHHHHhCCCceeeEEcCCCcEEEEEeHHHHHHHHH
Q 017536 220 ECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266 (369)
Q Consensus 220 ~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~di~~~~~ 266 (369)
+++++++++.+|++.|.+++.+++||+|++|+++|+||..||++++.
T Consensus 86 ~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Givt~~dll~~~~ 132 (184)
T 1pvm_A 86 PKVKSDYDVKDVAAYLSENGLERCAVVDDPGRVVGIVTLTDLSRYLS 132 (184)
T ss_dssp CEEETTCBHHHHHHHHHHHTCSEEEEECTTCCEEEEEEHHHHTTTSC
T ss_pred cEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHHH
Confidence 99999999999999999999999999999899999999999997543
No 52
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.77 E-value=1.8e-18 Score=148.67 Aligned_cols=161 Identities=16% Similarity=0.107 Sum_probs=103.9
Q ss_pred ccccccccccCCeEEeCCCcHHHHHHHHHhCCCeEeeEee-CCeEEEEEehHHHHHHHHHHHHHHHhhhhHHHHHHHhHH
Q 017536 40 ETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVE 118 (369)
Q Consensus 40 ~~~v~dim~~~~i~v~~~~~l~~a~~~m~~~~~~~lpVvd-~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (369)
..++.++|.++++++.+++++.+|+++|.+++++++||+| +++++|+++..|+...
T Consensus 12 ~~~~~~~~~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~l~Givt~~dl~~~----------------------- 68 (213)
T 1vr9_A 12 HMKVKKWVTQDFPMVEESATVRECLHRMRQYQTNECIVKDREGHFRGVVNKEDLLDL----------------------- 68 (213)
T ss_dssp -CBGGGGCBSCSCEEETTCBHHHHHHHHHHTTSSEEEEECTTSBEEEEEEGGGGTTS-----------------------
T ss_pred ccCHHHhhcCCCeEECCCCcHHHHHHHHHHCCCCEEEEEcCCCEEEEEEEHHHHHhh-----------------------
Confidence 4578999999999999999999999999999999999998 7999999999997642
Q ss_pred HhcCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-CCEEEEEeehHHHHH
Q 017536 119 KHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILM 197 (369)
Q Consensus 119 ~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~~~~~Giit~~dll~ 197 (369)
....+++++|. ++++++++++++.++++.|.+++++++||++ +|+++|++|.+|+++
T Consensus 69 --------------------~~~~~v~~im~--~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~Dil~ 126 (213)
T 1vr9_A 69 --------------------DLDSSVFNKVS--LPDFFVHEEDNITHALLLFLEHQEPYLPVVDEEMRLKGAVSLHDFLE 126 (213)
T ss_dssp --------------------CTTSBSGGGCB--CTTCCEETTSBHHHHHHHHHHCCCSEEEEECTTCBEEEEEEHHHHHH
T ss_pred --------------------cCCCcHHHHcc--CCCEEECCCCcHHHHHHHHHHhCCCEEEEEcCCCEEEEEEEHHHHHH
Confidence 11346899998 5789999999999999999999999999999 699999999999984
Q ss_pred HHHhcCCCccccccccccccCC-ceecCCCCHHHHHHHHHhCCCceeeEEcCCCc
Q 017536 198 RVISQNLPADSTLVEKVMTPNP-ECATIDTPIVDALHIMHDGKFLHLPVVDRDGD 251 (369)
Q Consensus 198 ~~~~~~~~~~~~~v~~~m~~~~-~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~ 251 (369)
.+. ... ...+.+.+-. .+.....++.++.+.|.+++.+.++|++.+|.
T Consensus 127 ~~~-~~~-----~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~~~~l~V~~~~~~ 175 (213)
T 1vr9_A 127 ALI-EAL-----AMDVPGIRFSVLLEDKPGELRKVVDALALSNINILSVITTRSG 175 (213)
T ss_dssp HHH-HSC-----C------------------------------------------
T ss_pred HHH-HHh-----cCCCCcEEEEEEeCCCCccHHHHHHHHHHCCCcEEEEEEEecC
Confidence 443 222 1222232211 11233445999999999999999999876654
No 53
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.77 E-value=5.7e-18 Score=140.52 Aligned_cols=141 Identities=14% Similarity=0.242 Sum_probs=103.2
Q ss_pred CcEEEEEeHHHHHHHHHhccCCCcccccccccc--cCCeEEeCCCcHHHHHHHHHhCCCeEeeEee-C-CeEEEEEehHH
Q 017536 16 ALLCGILTDKDIATRVIARELNLEETPVSKVMT--RNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-N-GEVIALLDIAK 91 (369)
Q Consensus 16 ~~~~Givt~~Di~~~~~~~~~~~~~~~v~dim~--~~~i~v~~~~~l~~a~~~m~~~~~~~lpVvd-~-~~~vGiv~~~d 91 (369)
+.-.|.++..+ +..+.....+...+|+++|+ ++++++++++++.+|++.|.+++++++||++ + ++++|+++..|
T Consensus 19 ~~~~g~l~~~e--~~~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~d 96 (172)
T 3lhh_A 19 GSSAGVIEHNE--HAMVKNVFRLDERTISSLMVPRSDIVFLDLNLPLDANLRTVMQSPHSRFPVCRNNVDDMVGIISAKQ 96 (172)
T ss_dssp --------------------------CTTTTSEEGGGCCCEETTSCHHHHHHHHHTCCCSEEEEESSSTTSEEEEEEHHH
T ss_pred HHHcCCCCHHH--HHHHHHHhccCCCCHHHhCccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEEHHH
Confidence 34567777555 24444455777899999999 7889999999999999999999999999998 4 89999999999
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHhHHHhcCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHH
Q 017536 92 CLYDAIARMERAAEKGKAIAAAVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKML 171 (369)
Q Consensus 92 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~ 171 (369)
++..... ....+++++|. +++++++++++.++++.|.
T Consensus 97 l~~~~~~----------------------------------------~~~~~v~~im~---~~~~v~~~~~l~~a~~~m~ 133 (172)
T 3lhh_A 97 LLSESIA----------------------------------------GERLELVDLVK---NCNFVPNSLSGMELLEHFR 133 (172)
T ss_dssp HHHHHHT----------------------------------------TCCCCGGGGCB---CCEEEETTCCHHHHHHHHH
T ss_pred HHHHHhh----------------------------------------cCcccHHHHhc---CCeEeCCCCCHHHHHHHHH
Confidence 9865210 11456899993 5889999999999999999
Q ss_pred HcCCceEEEEe-CCEEEEEeehHHHHHHHHh
Q 017536 172 ELRLSSAVVTV-ENKPRGILTSKDILMRVIS 201 (369)
Q Consensus 172 ~~~~~~~~V~d-~~~~~Giit~~dll~~~~~ 201 (369)
+++.+.+||++ +|+++|+||..|+++.+..
T Consensus 134 ~~~~~~~pVvd~~g~lvGiit~~Dil~~l~~ 164 (172)
T 3lhh_A 134 TTGSQMVFVVDEYGDLKGLVTLQDMMDALTG 164 (172)
T ss_dssp HHTCSEEEEECTTSCEEEEEEHHHHHHHHHT
T ss_pred HcCCeEEEEEeCCCCEEEEeeHHHHHHHHhC
Confidence 99999999999 7999999999999955543
No 54
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.76 E-value=7.7e-18 Score=136.73 Aligned_cols=119 Identities=17% Similarity=0.228 Sum_probs=103.4
Q ss_pred CccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-CCEEEEEeehHHHHHHHHhcC-CCccccccccccc----
Q 017536 143 SLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQN-LPADSTLVEKVMT---- 216 (369)
Q Consensus 143 ~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~~~~~Giit~~dll~~~~~~~-~~~~~~~v~~~m~---- 216 (369)
+++++ ++++++++++++.+|++.|.+++++++||++ +|+++|++|.+|++ +..... ......++.++|.
T Consensus 24 ~v~~~----~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~vGivt~~dl~-~~~~~~~~~~~~~~v~~~m~~~~~ 98 (152)
T 2uv4_A 24 QIGTY----ANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVI-NLAAEKTYNNLDVSVTKALQHRSH 98 (152)
T ss_dssp TCSBC----SSCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEEEHHHHH-HHHHCSSCCCTTSBGGGGGGTCCH
T ss_pred cCCcc----CCceEeCCCCcHHHHHHHHHHcCCceEeEECCCCcEEEEEeHHHHH-HHhcchhhhhhcchHHHHHhhhhc
Confidence 45665 3588899999999999999999999999999 89999999999997 444332 1223568999996
Q ss_pred --cCCceecCCCCHHHHHHHHHhCCCceeeEEcCCCcEEEEEeHHHHHHHHH
Q 017536 217 --PNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266 (369)
Q Consensus 217 --~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~di~~~~~ 266 (369)
++++++++++++.+|++.|.+++.+++||+|++|+++|+||..||++++.
T Consensus 99 ~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~l~ 150 (152)
T 2uv4_A 99 YFEGVLKCYLHETLETIINRLVEAEVHRLVVVDENDVVKGIVSLSDILQALV 150 (152)
T ss_dssp HHHTCSEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHC
T ss_pred ccCCCeEECCCCcHHHHHHHHHHcCCeEEEEECCCCeEEEEEEHHHHHHHHH
Confidence 78999999999999999999999999999999999999999999998653
No 55
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.75 E-value=6.1e-18 Score=141.88 Aligned_cols=132 Identities=11% Similarity=0.163 Sum_probs=111.5
Q ss_pred HhCCCCccccccCCCc--eeEe--CCCCcHHHHHHHHHHcCCceEEEE--e-CCEEEEEeehHHHHHHHHhcC-------
Q 017536 138 RMFRPSLSTIIPEKSK--VVTI--SPTDTVLMATKKMLELRLSSAVVT--V-ENKPRGILTSKDILMRVISQN------- 203 (369)
Q Consensus 138 ~~~~~~v~~im~~~~~--~~~v--~~~~~l~~~~~~m~~~~~~~~~V~--d-~~~~~Giit~~dll~~~~~~~------- 203 (369)
.+...+++++|.+..+ ++++ ++++++.+|++.|.+++++++||+ + +|+++|+||.+|+++.+....
T Consensus 7 ~~~~~~v~dim~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~d~~~~lvGiit~~dl~~~~~~~~~~~~~~~ 86 (185)
T 2j9l_A 7 FAHKTLAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIENARKKQDGVV 86 (185)
T ss_dssp --CCCBHHHHSBSCTTSCCCCCEESSCEEHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHTSCSCCC
T ss_pred hhccCcHHHHhcccccCceEEEecCCCccHHHHHHHHHhcCCCceeEEEECCCCeEEEEEEHHHHHHHHHhhcccCCCcc
Confidence 3556789999996322 7788 999999999999999999999999 6 889999999999984433210
Q ss_pred ----------------CCccccccccccccCCceecCCCCHHHHHHHHHhCCCceeeEEcCCCcEEEEEeHHHHHHHHHH
Q 017536 204 ----------------LPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267 (369)
Q Consensus 204 ----------------~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~di~~~~~~ 267 (369)
......++.++|.++++++++++++.+|++.|.+++.+++||+| +|+++|+||..||++++..
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd-~g~~vGiit~~dll~~l~~ 165 (185)
T 2j9l_A 87 STSIIYFTEHSPPLPPYTPPTLKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTH-NGRLLGIITKKDVLKHIAQ 165 (185)
T ss_dssp TTCEEECSSSCCCCCTTCCCCEECGGGEESSCCEEETTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHH
T ss_pred ccceeecccCCcccccccccCccHHHhhCcCCeEeCCCCCHHHHHHHHHhCCCcEEEEEE-CCEEEEEEEHHHHHHHHHH
Confidence 01235689999999999999999999999999999999999999 8999999999999998876
Q ss_pred Hhc
Q 017536 268 TVG 270 (369)
Q Consensus 268 ~~~ 270 (369)
...
T Consensus 166 ~~~ 168 (185)
T 2j9l_A 166 MAN 168 (185)
T ss_dssp HCC
T ss_pred hhc
Confidence 653
No 56
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.75 E-value=5.1e-18 Score=133.99 Aligned_cols=121 Identities=18% Similarity=0.194 Sum_probs=100.8
Q ss_pred Cccccccccccc--CCeEEeCCCcHHHHHHHHHhCCCeEeeEee-C-CeEEEEEehHHHHHHHHHHHHHHHhhhhHHHHH
Q 017536 38 LEETPVSKVMTR--NPTFVLSDTLAVEALQKMVQGKFRHLPVVE-N-GEVIALLDIAKCLYDAIARMERAAEKGKAIAAA 113 (369)
Q Consensus 38 ~~~~~v~dim~~--~~i~v~~~~~l~~a~~~m~~~~~~~lpVvd-~-~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~ 113 (369)
+.+.+++++|++ +++++++++++.+|++.|.+++++++||+| + |+++|+++..|++.....
T Consensus 3 l~~~~v~~iM~~~~~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~--------------- 67 (130)
T 3i8n_A 3 AQDVPVTQVMTPRPVVFRVDATMTINEFLDKHKDTPFSRPLVYSEQKDNIIGFVHRLELFKMQQS--------------- 67 (130)
T ss_dssp ----CCTTTSCCBCCCCEEETTSBHHHHHHHTTTCSCSCCEEESSSTTCEEEECCHHHHHHHHHT---------------
T ss_pred cCcCCHhhCCCcHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCcEEEEEEHHHHHHHHhc---------------
Confidence 457899999994 567899999999999999999999999998 5 899999999999865211
Q ss_pred HHhHHHhcCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-CCEEEEEeeh
Q 017536 114 VEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTS 192 (369)
Q Consensus 114 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~~~~~Giit~ 192 (369)
.....+++++|. ++.++++++++.++++.|.+++.+.+||++ +|+++|++|.
T Consensus 68 ------------------------~~~~~~v~~~m~---~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~vGivt~ 120 (130)
T 3i8n_A 68 ------------------------GSGQKQLGAVMR---PIQVVLNNTALPKVFDQMMTHRLQLALVVDEYGTVLGLVTL 120 (130)
T ss_dssp ------------------------TTTTSBHHHHSE---ECCEEETTSCHHHHHHHHHHHTCCEEEEECTTSCEEEEEEH
T ss_pred ------------------------CCCcCCHHHHhc---CCcCcCCCCcHHHHHHHHHHcCCeEEEEEcCCCCEEEEEEH
Confidence 012346788885 378999999999999999999999999998 7999999999
Q ss_pred HHHHHHHH
Q 017536 193 KDILMRVI 200 (369)
Q Consensus 193 ~dll~~~~ 200 (369)
.|+++.+.
T Consensus 121 ~dil~~l~ 128 (130)
T 3i8n_A 121 EDIFEHLV 128 (130)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHc
Confidence 99985443
No 57
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.74 E-value=2.1e-17 Score=136.14 Aligned_cols=128 Identities=17% Similarity=0.163 Sum_probs=109.6
Q ss_pred CCCccccccccccc---CCeEEeCCCcHHHHHHHHHhCCCeEeeEee-CCeEEEEEehHHHHHHHHHHHHHHHhhhhHHH
Q 017536 36 LNLEETPVSKVMTR---NPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIA 111 (369)
Q Consensus 36 ~~~~~~~v~dim~~---~~i~v~~~~~l~~a~~~m~~~~~~~lpVvd-~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~ 111 (369)
..+..++|+++|.+ +++++.+++++.+|++.|.+++++.+||+| +|+++|+++..|+++......
T Consensus 19 ~~l~~~~v~dim~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~----------- 87 (165)
T 3fhm_A 19 FQGMATFVKDLLDRKGRDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDADGVVLGIFTERDLVKAVAGQG----------- 87 (165)
T ss_dssp CSSSSCBHHHHHHHHCSCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHG-----------
T ss_pred HhhhhcCHHHHhccCCCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEHHHHHHHHHhcC-----------
Confidence 35667899999995 699999999999999999999999999999 789999999999987633210
Q ss_pred HHHHhHHHhcCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEeCCEEEEEee
Q 017536 112 AAVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILT 191 (369)
Q Consensus 112 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d~~~~~Giit 191 (369)
......+++++|. ++++++++++++.++++.|.+++.+++||+++|+++|+||
T Consensus 88 -------------------------~~~~~~~v~~~m~--~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~g~~~Giit 140 (165)
T 3fhm_A 88 -------------------------AASLQQSVSVAMT--KNVVRCQHNSTTDQLMEIMTGGRFRHVPVEENGRLAGIIS 140 (165)
T ss_dssp -------------------------GGGGTSBGGGTSB--SSCCCBCTTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEE
T ss_pred -------------------------CccccCCHHHHhc--CCCeEECCCCcHHHHHHHHHHcCCCEEEEEECCEEEEEEE
Confidence 0123457899998 6789999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhc
Q 017536 192 SKDILMRVISQ 202 (369)
Q Consensus 192 ~~dll~~~~~~ 202 (369)
..|++ +.+..
T Consensus 141 ~~dil-~~~~~ 150 (165)
T 3fhm_A 141 IGDVV-KARIG 150 (165)
T ss_dssp HHHHH-HHTTC
T ss_pred HHHHH-HHHHH
Confidence 99998 54443
No 58
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.74 E-value=2.1e-17 Score=128.80 Aligned_cols=116 Identities=22% Similarity=0.355 Sum_probs=103.2
Q ss_pred cccccccccCCeEEeCCCcHHHHHHHHHhCCCeEeeEee-CCeEEEEEehHHHHHHHHHHHHHHHhhhhHHHHHHHhHHH
Q 017536 41 TPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119 (369)
Q Consensus 41 ~~v~dim~~~~i~v~~~~~l~~a~~~m~~~~~~~lpVvd-~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (369)
++++++|.++++++++++++.+|++.|.+++++.+||+| +|+++|+++..|++....
T Consensus 1 ~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~~~---------------------- 58 (122)
T 3kpb_A 1 TLVKDILSKPPITAHSNISIMEAAKILIKHNINHLPIVDEHGKLVGIITSWDIAKALA---------------------- 58 (122)
T ss_dssp CBHHHHCCSCCCCEETTSBHHHHHHHHHHHTCSCEEEECTTSBEEEEECHHHHHHHHH----------------------
T ss_pred CchHHhhCCCCEEeCCCCcHHHHHHHHHHcCCCeEEEECCCCCEEEEEEHHHHHHHHH----------------------
Confidence 368999999999999999999999999999999999999 799999999999876522
Q ss_pred hcCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-CCEEEEEeehHHHHHH
Q 017536 120 HWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMR 198 (369)
Q Consensus 120 ~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~~~~~Giit~~dll~~ 198 (369)
....+++++|. +++.++++++++.++++.|.+++.+++||++ +|+++|++|.+|++ +
T Consensus 59 -------------------~~~~~v~~~~~--~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Givt~~dl~-~ 116 (122)
T 3kpb_A 59 -------------------QNKKTIEEIMT--RNVITAHEDEPVDHVAIKMSKYNISGVPVVDDYRRVVGIVTSEDIS-R 116 (122)
T ss_dssp -------------------TTCCBGGGTSB--SSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHH-H
T ss_pred -------------------hcccCHHHHhc--CCCeEECCCCCHHHHHHHHHHhCCCeEEEECCCCCEEEEEeHHHHH-H
Confidence 11236889998 5788999999999999999999999999999 69999999999998 5
Q ss_pred HH
Q 017536 199 VI 200 (369)
Q Consensus 199 ~~ 200 (369)
.+
T Consensus 117 ~l 118 (122)
T 3kpb_A 117 LF 118 (122)
T ss_dssp HH
T ss_pred Hh
Confidence 44
No 59
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.73 E-value=2.2e-17 Score=135.60 Aligned_cols=128 Identities=10% Similarity=0.154 Sum_probs=109.0
Q ss_pred hCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe---CCEEEEEeehHHHHHHHHhcCCC----cccccc
Q 017536 139 MFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV---ENKPRGILTSKDILMRVISQNLP----ADSTLV 211 (369)
Q Consensus 139 ~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d---~~~~~Giit~~dll~~~~~~~~~----~~~~~v 211 (369)
....+++++|. ++++++++++++.+|++.|.+++++++||++ +|+++|++|.+|++ +....... ....++
T Consensus 10 ~~~~~v~dim~--~~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~~~~~~~~Givt~~dl~-~~~~~~~~~~~~~~~~~v 86 (164)
T 2pfi_A 10 SHHVRVEHFMN--HSITTLAKDTPLEEVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLV-QALQAEPPSRAPGHQQCL 86 (164)
T ss_dssp CCSCBHHHHCB--CCCCCEETTCBHHHHHHHHHTCCCSEEEEESCTTTCBEEEEEEHHHHH-HHHHC-------CCCCBH
T ss_pred ccCCCHHHHcC--CCCeEECCCCcHHHHHHHHHhCCCCceeEEecCCCCEEEEEEEHHHHH-HHHHhhccccCCcccchh
Confidence 34567899998 5788999999999999999999999999998 48999999999997 44433211 124578
Q ss_pred ccccccC------CceecCCCCHHHHHHHHHhCCCceeeEEcCCCcEEEEEeHHHHHHHHHHHhc
Q 017536 212 EKVMTPN------PECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATVG 270 (369)
Q Consensus 212 ~~~m~~~------~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~di~~~~~~~~~ 270 (369)
.++|.++ ++++++++++.+|++.|.+++.+++||+| +|+++|+||..||++++.....
T Consensus 87 ~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~l~Giit~~dil~~~~~~~~ 150 (164)
T 2pfi_A 87 QDILARGCPTEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTS-RGRAVGCVSWVEMKKAISNLTN 150 (164)
T ss_dssp HHHHHTTCCCBCCCCCEETTCBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHHHHHHHHHS
T ss_pred hhhhcccccccCCceEECCCCcHHHHHHHHHHhCCCEEEEEE-CCEEEEEEEHHHHHHHHHhhhC
Confidence 8999876 78999999999999999999999999999 7999999999999998876553
No 60
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.73 E-value=4.1e-17 Score=127.65 Aligned_cols=120 Identities=20% Similarity=0.254 Sum_probs=103.6
Q ss_pred cccccccccCCeEEeCCCcHHHHHHHHHhCCCeEeeEeeCCeEEEEEehHHHHHHHHHHHHHHHhhhhHHHHHHHhHHHh
Q 017536 41 TPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120 (369)
Q Consensus 41 ~~v~dim~~~~i~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (369)
++++++|.++++++++++++.+|++.|.+++++.+||+|+|+++|+++..|+++.....
T Consensus 1 m~v~~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~G~it~~dl~~~~~~~--------------------- 59 (125)
T 1pbj_A 1 MRVEDVMVTDVDTIDITASLEDVLRNYVENAKGSSVVVKEGVRVGIVTTWDVLEAIAEG--------------------- 59 (125)
T ss_dssp -CHHHHCBCSCCEEETTCBHHHHHHHHHHHCCCEEEEEETTEEEEEEEHHHHHHHHHHT---------------------
T ss_pred CCHHHhcCCCceEECCCCcHHHHHHHHHHcCCCEEEEEeCCeeEEEEeHHHHHHHHhcC---------------------
Confidence 36889999999999999999999999999999999999999999999999987542210
Q ss_pred cCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEeCCEEEEEeehHHHHHHHH
Q 017536 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVI 200 (369)
Q Consensus 121 ~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d~~~~~Giit~~dll~~~~ 200 (369)
......+++++|. +++.++++++++.++++.|.+++.+++||+++|+++|++|.+|++ +.+
T Consensus 60 ----------------~~~~~~~v~~~m~--~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~Gvit~~dl~-~~l 120 (125)
T 1pbj_A 60 ----------------DDLAEVKVWEVME--RDLVTISPRATIKEAAEKMVKNVVWRLLVEEDDEIIGVISATDIL-RAK 120 (125)
T ss_dssp ----------------CCTTTSBHHHHCB--CGGGEECTTSCHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHH-HHH
T ss_pred ----------------CcccccCHHHHcC--CCCeEECCCCCHHHHHHHHHhcCCcEEEEEECCEEEEEEEHHHHH-HHH
Confidence 0012456888887 578999999999999999999999999999989999999999998 444
No 61
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.73 E-value=1.7e-17 Score=135.14 Aligned_cols=123 Identities=20% Similarity=0.226 Sum_probs=102.9
Q ss_pred cccccccccc--CCeEEeCCCcHHHHHHHHHhCCCeEeeEee-CCeEEEEEehHHHHHHHHHHHHHHHhhhhHHHHHHHh
Q 017536 40 ETPVSKVMTR--NPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEG 116 (369)
Q Consensus 40 ~~~v~dim~~--~~i~v~~~~~l~~a~~~m~~~~~~~lpVvd-~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~~ 116 (369)
..+++++|++ +++++.+++|+.+|+++|.+++++++||+| +|+++|+++.+|++........
T Consensus 14 ~~~~~~iM~P~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~~~~lvGiit~~Di~~~~~~~~~--------------- 78 (156)
T 3k6e_A 14 LGQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEHDL--------------- 78 (156)
T ss_dssp HTTGGGGEEETTSSCCEETTSBHHHHHHHHTTSSSSEEEEECC-CBEEEEEEHHHHHHHHHHHTC---------------
T ss_pred hccHHHhCcchhHeEEECCcCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEecchhhhhhhccc---------------
Confidence 3478999984 789999999999999999999999999998 6999999999999876432100
Q ss_pred HHHhcCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-CCEEEEEeehHHH
Q 017536 117 VEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDI 195 (369)
Q Consensus 117 ~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~~~~~Giit~~dl 195 (369)
........+++++|. +++.++++++++.+|++.|.++++ +||+| +|+++|+||.+|+
T Consensus 79 ------------------~~~~~~~~~v~~im~--~~~~~v~~~~~l~~~~~~m~~~~~--lpVVd~~g~l~GiiT~~Di 136 (156)
T 3k6e_A 79 ------------------SQEIMADTDIVHMTK--TDVAVVSPDFTITEVLHKLVDESF--LPVVDAEGIFQGIITRKSI 136 (156)
T ss_dssp ------------------CHHHHTTSBGGGTCB--CSCCCBCTTCCHHHHHHHTTTSSE--EEEECTTSBEEEEEEHHHH
T ss_pred ------------------ccccccccCHHHhhc--CCceecccccHHHHHHHHHHHcCC--eEEEecCCEEEEEEEHHHH
Confidence 012345667999998 689999999999999999987654 99998 8999999999999
Q ss_pred HHHH
Q 017536 196 LMRV 199 (369)
Q Consensus 196 l~~~ 199 (369)
++.+
T Consensus 137 l~~~ 140 (156)
T 3k6e_A 137 LKAV 140 (156)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9544
No 62
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.73 E-value=3.9e-18 Score=134.12 Aligned_cols=117 Identities=17% Similarity=0.186 Sum_probs=100.3
Q ss_pred ccccccccccC--CeEEeCCCcHHHHHHHHHhCCCeEeeEee-C-CeEEEEEehHHHHHHHHHHHHHHHhhhhHHHHHHH
Q 017536 40 ETPVSKVMTRN--PTFVLSDTLAVEALQKMVQGKFRHLPVVE-N-GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVE 115 (369)
Q Consensus 40 ~~~v~dim~~~--~i~v~~~~~l~~a~~~m~~~~~~~lpVvd-~-~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~ 115 (369)
+.+++++|+++ ++++++++++.+|++.|.+++++++||++ + |+++|+++..|+++....
T Consensus 2 ~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~----------------- 64 (127)
T 3nqr_A 2 DQRVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMRS----------------- 64 (127)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGST-----------------
T ss_pred CcCHHHhcccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhc-----------------
Confidence 46899999955 99999999999999999999999999998 4 799999999998753110
Q ss_pred hHHHhcCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-CCEEEEEeehHH
Q 017536 116 GVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKD 194 (369)
Q Consensus 116 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~~~~~Giit~~d 194 (369)
.....+++++|.+ +.++++++++.++++.|.+++.+.+||++ +|+++|++|..|
T Consensus 65 ----------------------~~~~~~v~~~m~~---~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Giit~~d 119 (127)
T 3nqr_A 65 ----------------------DAEAFSMDKVLRT---AVVVPESKRVDRMLKEFRSQRYHMAIVIDEFGGVSGLVTIED 119 (127)
T ss_dssp ----------------------TCCCCCHHHHCBC---CCEEETTCBHHHHHHHHHHTTCCEEEEECTTSCEEEEEEHHH
T ss_pred ----------------------cCCCCCHHHHcCC---CeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHH
Confidence 0124467888863 67899999999999999999999999999 899999999999
Q ss_pred HHHH
Q 017536 195 ILMR 198 (369)
Q Consensus 195 ll~~ 198 (369)
+++.
T Consensus 120 ll~~ 123 (127)
T 3nqr_A 120 ILEL 123 (127)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9844
No 63
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.73 E-value=1.4e-17 Score=131.20 Aligned_cols=118 Identities=16% Similarity=0.237 Sum_probs=101.7
Q ss_pred cccccccccc--cCCeEEeCCCcHHHHHHHHHhCCCeEeeEeeC--CeEEEEEehHHHHHHHHHHHHHHHhhhhHHHHHH
Q 017536 39 EETPVSKVMT--RNPTFVLSDTLAVEALQKMVQGKFRHLPVVEN--GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAV 114 (369)
Q Consensus 39 ~~~~v~dim~--~~~i~v~~~~~l~~a~~~m~~~~~~~lpVvd~--~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~ 114 (369)
.+.+++++|+ ++++++++++++.+|++.|.+++++++||+++ |+++|+++..|++....
T Consensus 3 ~~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~----------------- 65 (129)
T 3jtf_A 3 AERTVADIMVPRSRMDLLDISQPLPQLLATIIETAHSRFPVYEDDRDNIIGILLAKDLLRYML----------------- 65 (129)
T ss_dssp -CCBHHHHCEEGGGCCCEETTSCHHHHHHHHHHSCCSEEEEESSSTTCEEEEEEGGGGGGGGT-----------------
T ss_pred CCCCHHHhCccHHHeEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCcEEEEEEHHHHHhHhc-----------------
Confidence 4678999999 67899999999999999999999999999984 89999999999875310
Q ss_pred HhHHHhcCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-CCEEEEEeehH
Q 017536 115 EGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSK 193 (369)
Q Consensus 115 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~~~~~Giit~~ 193 (369)
....+++++|.+ ++++++++++.++++.|.+++.+.+||++ +|+++|++|.+
T Consensus 66 ------------------------~~~~~v~~~m~~---~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~g~~~Giit~~ 118 (129)
T 3jtf_A 66 ------------------------EPALDIRSLVRP---AVFIPEVKRLNVLLREFRASRNHLAIVIDEHGGISGLVTME 118 (129)
T ss_dssp ------------------------CTTSCGGGGCBC---CCEEETTCBHHHHHHHHHTSSCCEEEEECC-CCEEEEEEHH
T ss_pred ------------------------cCCcCHHHHhCC---CeEeCCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHH
Confidence 013468899963 78999999999999999999999999999 69999999999
Q ss_pred HHHHHHH
Q 017536 194 DILMRVI 200 (369)
Q Consensus 194 dll~~~~ 200 (369)
|+++.+.
T Consensus 119 Dil~~l~ 125 (129)
T 3jtf_A 119 DVLEQIV 125 (129)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9985554
No 64
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.73 E-value=8.7e-18 Score=132.24 Aligned_cols=122 Identities=11% Similarity=0.180 Sum_probs=105.4
Q ss_pred cccccccccccCCeEEeCCCcHHHHHHHHHhCCCeEeeEeeCCeEEEEEehHHHHHHHHHHHHHHHhhhhHHHHHHHhHH
Q 017536 39 EETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVE 118 (369)
Q Consensus 39 ~~~~v~dim~~~~i~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (369)
...+++++|.+++.++.+++++.+|++.|.+++++++||+|+|+++|+++..|+++....
T Consensus 3 ~s~~v~~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~Givt~~dl~~~~~~-------------------- 62 (128)
T 3gby_A 3 ASVTFSYLAETDYPVFTLGGSTADAARRLAASGCACAPVLDGERYLGMVHLSRLLEGRKG-------------------- 62 (128)
T ss_dssp TTCBGGGGCBCCSCCEETTSBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHTTCSS--------------------
T ss_pred cceEHHHhhcCCcceECCCCCHHHHHHHHHHCCCcEEEEEECCEEEEEEEHHHHHHHHhh--------------------
Confidence 367999999999999999999999999999999999999999999999999998753100
Q ss_pred HhcCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-CCEEEEEeehHHHHH
Q 017536 119 KHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILM 197 (369)
Q Consensus 119 ~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~~~~~Giit~~dll~ 197 (369)
+ .....+++++|. +++.++++++++.++++.|.+++.+++||++ +|+++|++|.+|++
T Consensus 63 ---~---------------~~~~~~v~~~m~--~~~~~v~~~~~l~~~~~~~~~~~~~~lpVvd~~g~~~Giit~~dll- 121 (128)
T 3gby_A 63 ---W---------------PTVKEKLGEELL--ETVRSYRPGEQLFDNLISVAAAKCSVVPLADEDGRYEGVVSRKRIL- 121 (128)
T ss_dssp ---S---------------CCTTCBCCGGGC--BCCCCBCTTSBGGGSHHHHHHCSSSEEEEECTTCBEEEEEEHHHHH-
T ss_pred ---C---------------CcccCcHHHHcc--CCCcEECCCCCHHHHHHHHHhCCCcEEEEECCCCCEEEEEEHHHHH-
Confidence 0 001245889998 5788999999999999999999999999998 89999999999998
Q ss_pred HHHh
Q 017536 198 RVIS 201 (369)
Q Consensus 198 ~~~~ 201 (369)
+.+.
T Consensus 122 ~~l~ 125 (128)
T 3gby_A 122 GFLA 125 (128)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5443
No 65
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.73 E-value=4.8e-17 Score=134.88 Aligned_cols=139 Identities=16% Similarity=0.184 Sum_probs=111.0
Q ss_pred cEEEEEeHHHHHHHHHhccCCCcccccccccc--cCCeEEeCCCcHHHHHHHHHhCCCeEeeEee-C-CeEEEEEehHHH
Q 017536 17 LLCGILTDKDIATRVIARELNLEETPVSKVMT--RNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-N-GEVIALLDIAKC 92 (369)
Q Consensus 17 ~~~Givt~~Di~~~~~~~~~~~~~~~v~dim~--~~~i~v~~~~~l~~a~~~m~~~~~~~lpVvd-~-~~~vGiv~~~di 92 (369)
.--|.++..+- ..+.....+...+|+++|+ ++++++++++++.+|++.|.+++++++||++ + |+++|+++.+|+
T Consensus 14 ~~~g~l~~~e~--~~i~~~l~l~~~~v~diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~lvGivt~~Dl 91 (173)
T 3ocm_A 14 PAVPAFGVEER--NMVSGVLTLAERSIRSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDL 91 (173)
T ss_dssp ----CCCHHHH--HHHHHHHHHTTSCSTTTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEESSSTTSEEEEEEHHHH
T ss_pred HhcCCcCHHHH--HHHHHHhccCCCCHHHhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeCCCCCEEEEEEHHHH
Confidence 34588885552 3333444677889999997 4689999999999999999999999999998 4 799999999999
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHhHHHhcCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHH
Q 017536 93 LYDAIARMERAAEKGKAIAAAVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLE 172 (369)
Q Consensus 93 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~ 172 (369)
+..... ....+++ +| .+++++++++++.++++.|.+
T Consensus 92 ~~~~~~----------------------------------------~~~~~v~-~~---~~~~~v~~~~~l~~al~~m~~ 127 (173)
T 3ocm_A 92 VADLIT----------------------------------------EGRVRRN-RL---RDPIIVHESIGILRLMDTLKR 127 (173)
T ss_dssp HHHHHH----------------------------------------HSSCCGG-GS---BCCCEECGGGCHHHHHHHHHH
T ss_pred HHHHhc----------------------------------------CCcchhH-hc---CCCeEECCCCcHHHHHHHHHH
Confidence 875221 0133466 44 358899999999999999999
Q ss_pred cCCceEEEEe-CCEEEEEeehHHHHHHHHh
Q 017536 173 LRLSSAVVTV-ENKPRGILTSKDILMRVIS 201 (369)
Q Consensus 173 ~~~~~~~V~d-~~~~~Giit~~dll~~~~~ 201 (369)
++.+.+||++ +|+++|+||..|++..+..
T Consensus 128 ~~~~~~~Vvde~g~lvGiIT~~Dil~~l~~ 157 (173)
T 3ocm_A 128 SRGQLVLVADEFGAIEGLVTPIDVFEAIAG 157 (173)
T ss_dssp STTCCEEEECTTCCEEEEECHHHHHHHHHC
T ss_pred cCCeEEEEEeCCCCEEEEEeHHHHHHHHhC
Confidence 9999999998 8999999999999955553
No 66
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.73 E-value=4.6e-17 Score=128.87 Aligned_cols=121 Identities=15% Similarity=0.198 Sum_probs=105.4
Q ss_pred cccccccccccCCeEEeCCCcHHHHHHHHHhCCCeEeeEeeCCeEEEEEehHHHHHHHHHHHHHHHhhhhHHHHHHHhHH
Q 017536 39 EETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVE 118 (369)
Q Consensus 39 ~~~~v~dim~~~~i~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (369)
.+.+++++|.++++++.+++++.+|++.|.+++++++||+|+|+++|+++..|++......
T Consensus 2 ~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~Givt~~dl~~~~~~~------------------- 62 (133)
T 2ef7_A 2 EEEIVKEYMKTQVISVTKDAKLNDIAKVMTEKNIGSVIVVDGNKPVGIITERDIVKAIGKG------------------- 62 (133)
T ss_dssp CCCBGGGTSBCSCCEEETTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHHHHTT-------------------
T ss_pred CcccHHHhccCCCEEECCCCcHHHHHHHHHhcCCCEEEEEECCEEEEEEcHHHHHHHHhcC-------------------
Confidence 4678999999999999999999999999999999999999999999999999987642100
Q ss_pred HhcCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-CCEEEEEeehHHHHH
Q 017536 119 KHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILM 197 (369)
Q Consensus 119 ~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~~~~~Giit~~dll~ 197 (369)
.....+++++|. +++.++++++++.++++.|.+++.+++||++ +|+++|++|..|++.
T Consensus 63 -------------------~~~~~~v~~~~~--~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~ 121 (133)
T 2ef7_A 63 -------------------KSLETKAEEFMT--ASLITIREDSPITGALALMRQFNIRHLPVVDDKGNLKGIISIRDITR 121 (133)
T ss_dssp -------------------CCTTCBGGGTSE--ECCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHH
T ss_pred -------------------CCcccCHHHHcC--CCCEEECCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHH
Confidence 012356889997 4788999999999999999999999999999 899999999999984
Q ss_pred HH
Q 017536 198 RV 199 (369)
Q Consensus 198 ~~ 199 (369)
.+
T Consensus 122 ~~ 123 (133)
T 2ef7_A 122 AI 123 (133)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 67
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.72 E-value=4.1e-17 Score=133.14 Aligned_cols=138 Identities=15% Similarity=0.223 Sum_probs=106.4
Q ss_pred cccccccc------cCCeEEeCCCcHHHHHHHHHhCCCeEeeEeeCCeEEEEEehHHHHHHHHHHHHHHHhhhhHHHHHH
Q 017536 41 TPVSKVMT------RNPTFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAV 114 (369)
Q Consensus 41 ~~v~dim~------~~~i~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~ 114 (369)
.+|+++|. ++++++.+++++.+|++.|.+++++++||.++|+++|+++..|+++.....
T Consensus 7 ~~v~dim~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~V~~~~~~~Givt~~dl~~~~~~~--------------- 71 (157)
T 4fry_A 7 TTVAQILKAKPDSGRTIYTVTKNDFVYDAIKLMAEKGIGALLVVDGDDIAGIVTERDYARKVVLQ--------------- 71 (157)
T ss_dssp CBHHHHHHHSTTTTCCCCEEETTSBHHHHHHHHHHHTCSEEEEESSSSEEEEEEHHHHHHHSGGG---------------
T ss_pred HHHHHHHhcccccCCCCeEECCCCcHHHHHHHHHHcCCCEEEEeeCCEEEEEEEHHHHHHHHHhc---------------
Confidence 47999998 456999999999999999999999999997789999999999998652210
Q ss_pred HhHHHhcCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEeCCEEEEEeehHH
Q 017536 115 EGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKD 194 (369)
Q Consensus 115 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d~~~~~Giit~~d 194 (369)
+ ......+++++|. +++.++++++++.++++.|.+++++++||+++|+++|++|.+|
T Consensus 72 -------~--------------~~~~~~~v~~~m~--~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~g~~~Giit~~d 128 (157)
T 4fry_A 72 -------E--------------RSSKATRVEEIMT--AKVRYVEPSQSTDECMALMTEHRMRHLPVLDGGKLIGLISIGD 128 (157)
T ss_dssp -------T--------------CCSSSCBHHHHSB--SSCCCBCTTSBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHH
T ss_pred -------c--------------CCccccCHHHHcC--CCCcEECCCCcHHHHHHHHHHcCCCEEEEEECCEEEEEEEHHH
Confidence 0 0013456888998 5789999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCcccccccccccc
Q 017536 195 ILMRVISQNLPADSTLVEKVMTP 217 (369)
Q Consensus 195 ll~~~~~~~~~~~~~~v~~~m~~ 217 (369)
++ +.+..........+.+++..
T Consensus 129 il-~~l~~~~~~~~~~~~~~i~~ 150 (157)
T 4fry_A 129 LV-KSVIADQQFTISQLEHYIHG 150 (157)
T ss_dssp HH-HHHHTTCCCCCC--------
T ss_pred HH-HHHHHHHHhhHHHHHhhccC
Confidence 98 44444333323455555543
No 68
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.72 E-value=8.5e-17 Score=131.74 Aligned_cols=128 Identities=20% Similarity=0.307 Sum_probs=106.1
Q ss_pred ccccccccccCCeEEeCCCcHHHHHHHHHhCCCeEeeEee-CCeEEEEEehHHHHHHHHHHHHHHHhhhhHHHHHHHhHH
Q 017536 40 ETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVE 118 (369)
Q Consensus 40 ~~~v~dim~~~~i~v~~~~~l~~a~~~m~~~~~~~lpVvd-~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (369)
..+|+++|.++++++.+++++.+|++.|.+++++++||+| +|+++|+++..|++..........
T Consensus 4 ~~~v~dim~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~~~~~~--------------- 68 (160)
T 2o16_A 4 MIKVEDMMTRHPHTLLRTHTLNDAKHLMEALDIRHVPIVDANKKLLGIVSQRDLLAAQESSLQRS--------------- 68 (160)
T ss_dssp CCBGGGTSEESCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHHHCC-----------------
T ss_pred cCcHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHHhhccc---------------
Confidence 5689999999999999999999999999999999999998 799999999999987643211000
Q ss_pred HhcCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEeCCEEEEEeehHHHHHH
Q 017536 119 KHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMR 198 (369)
Q Consensus 119 ~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d~~~~~Giit~~dll~~ 198 (369)
..........+++++|. ++++++++++++.++++.|.+++.+++||+++|+++|+||.+|+++.
T Consensus 69 --------------~~~~~~~~~~~v~~im~--~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~g~lvGiit~~dil~~ 132 (160)
T 2o16_A 69 --------------AQGDSLAFETPLFEVMH--TDVTSVAPQAGLKESAIYMQKHKIGCLPVVAKDVLVGIITDSDFVTI 132 (160)
T ss_dssp ---------------------CCCBHHHHSC--SCEEEBCTTSBHHHHHHHHHHTTCSCEEEEETTEEEEEECHHHHHHH
T ss_pred --------------ccccchhcccCHHHHhc--CCCeEECCCCCHHHHHHHHHHhCCCEEEEEECCEEEEEEEHHHHHHH
Confidence 00011234567889998 57999999999999999999999999999999999999999999843
No 69
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.72 E-value=5.1e-17 Score=128.24 Aligned_cols=120 Identities=9% Similarity=0.126 Sum_probs=99.2
Q ss_pred ccccccccc--CCeEEeCCCcHHHHHHHHHhCCCeEeeEee--CCeEEEEEehHHHHHHHHHHHHHHHhhhhHHHHHHHh
Q 017536 41 TPVSKVMTR--NPTFVLSDTLAVEALQKMVQGKFRHLPVVE--NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEG 116 (369)
Q Consensus 41 ~~v~dim~~--~~i~v~~~~~l~~a~~~m~~~~~~~lpVvd--~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~~ 116 (369)
.+|+++|++ +++++++++++.+|++.|.+++++++||++ +|+++|+++.+|+++.....
T Consensus 2 ~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~~~~~~lvGivt~~dl~~~~~~~----------------- 64 (130)
T 3hf7_A 2 VSVNDIMVPRNEIVGIDINDDWKSIVRQLTHSPHGRIVLYRDSLDDAISMLRVREAYRLMTEK----------------- 64 (130)
T ss_dssp CBHHHHSEEGGGCCEEETTSCHHHHHHHHHTCSSSEEEEESSSGGGEEEEEEHHHHHHHHTSS-----------------
T ss_pred cCHHHhCccHHHEEEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCCcEEEEEEHHHHHHHHhcc-----------------
Confidence 578999974 689999999999999999999999999996 38999999999998752210
Q ss_pred HHHhcCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-CCEEEEEeehHHH
Q 017536 117 VEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDI 195 (369)
Q Consensus 117 ~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~~~~~Giit~~dl 195 (369)
.. ....+++++|. +++++++++++.++++.|.+++.+.+||++ +|+++|++|.+|+
T Consensus 65 ------~~--------------~~~~~v~~~m~---~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Di 121 (130)
T 3hf7_A 65 ------KE--------------FTKEIMLRAAD---EIYFVPEGTPLSTQLVKFQRNKKKVGLVVDEYGDIQGLVTVEDI 121 (130)
T ss_dssp ------SC--------------CCHHHHHHHSB---CCCEEETTCBHHHHHHHHHHHCCCEEEEECTTSCEEEEEEHHHH
T ss_pred ------Cc--------------cchhhHHHhcc---CCeEeCCCCcHHHHHHHHHhcCCeEEEEEcCCCCEEEEeeHHHH
Confidence 00 00113566674 478999999999999999999999999998 8999999999999
Q ss_pred HHHHH
Q 017536 196 LMRVI 200 (369)
Q Consensus 196 l~~~~ 200 (369)
++.+.
T Consensus 122 l~~l~ 126 (130)
T 3hf7_A 122 LEEIV 126 (130)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 85544
No 70
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.72 E-value=7.2e-17 Score=138.55 Aligned_cols=118 Identities=17% Similarity=0.200 Sum_probs=106.7
Q ss_pred CCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-CCEEEEEeehHHHHHHHHhcCCCccccccccccccCC
Q 017536 141 RPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNP 219 (369)
Q Consensus 141 ~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~~~~~Giit~~dll~~~~~~~~~~~~~~v~~~m~~~~ 219 (369)
..+++++|. ++++++++++++.+|++.|.+++++++||++ +++++|++|.+|+. +.. ...+++++|.+++
T Consensus 12 ~~~~~~~~~--~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~l~Givt~~dl~-~~~------~~~~v~~im~~~~ 82 (213)
T 1vr9_A 12 HMKVKKWVT--QDFPMVEESATVRECLHRMRQYQTNECIVKDREGHFRGVVNKEDLL-DLD------LDSSVFNKVSLPD 82 (213)
T ss_dssp -CBGGGGCB--SCSCEEETTCBHHHHHHHHHHTTSSEEEEECTTSBEEEEEEGGGGT-TSC------TTSBSGGGCBCTT
T ss_pred ccCHHHhhc--CCCeEECCCCcHHHHHHHHHHCCCCEEEEEcCCCEEEEEEEHHHHH-hhc------CCCcHHHHccCCC
Confidence 356788898 6899999999999999999999999999999 89999999999996 321 1468999999999
Q ss_pred ceecCCCCHHHHHHHHHhCCCceeeEEcCCCcEEEEEeHHHHHHHHHH
Q 017536 220 ECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267 (369)
Q Consensus 220 ~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~di~~~~~~ 267 (369)
+++++++++.+|++.|.+++++++||+|++|+++|+||..|+++++..
T Consensus 83 ~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~Dil~~~~~ 130 (213)
T 1vr9_A 83 FFVHEEDNITHALLLFLEHQEPYLPVVDEEMRLKGAVSLHDFLEALIE 130 (213)
T ss_dssp CCEETTSBHHHHHHHHHHCCCSEEEEECTTCBEEEEEEHHHHHHHHHH
T ss_pred EEECCCCcHHHHHHHHHHhCCCEEEEEcCCCEEEEEEEHHHHHHHHHH
Confidence 999999999999999999999999999988999999999999997654
No 71
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.72 E-value=3.9e-17 Score=132.68 Aligned_cols=122 Identities=20% Similarity=0.281 Sum_probs=105.8
Q ss_pred CCccccccccccc--CCeEEeCCCcHHHHHHHHHhCCCeEeeEe-e--CCeEEEEEehHHHHHHHHHHHHHHHhhhhHHH
Q 017536 37 NLEETPVSKVMTR--NPTFVLSDTLAVEALQKMVQGKFRHLPVV-E--NGEVIALLDIAKCLYDAIARMERAAEKGKAIA 111 (369)
Q Consensus 37 ~~~~~~v~dim~~--~~i~v~~~~~l~~a~~~m~~~~~~~lpVv-d--~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~ 111 (369)
.+...+|+++|++ +++++++++++.+|++.|.+++++++||+ + +|+++|+++..|++.....
T Consensus 16 ~l~~~~v~~iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d~~~~~lvGivt~~dl~~~~~~------------- 82 (153)
T 3oco_A 16 EMNDKVASDVMVDRTSMSVVDVDETIADALLLYLEEQYSRFPVTADNDKDKIIGYAYNYDIVRQARI------------- 82 (153)
T ss_dssp HHHHCBHHHHSEEGGGCCCEETTSBHHHHHHHHHHHCCSEEEEEETTEEEEEEEEEEHHHHHHHHHH-------------
T ss_pred ccCCCEeeeEecchhheEEEcCCCCHHHHHHHHHhCCCCEEEEEECCCCCcEEEEEEHHHHHhHHhc-------------
Confidence 4557899999996 89999999999999999999999999999 5 3899999999999865221
Q ss_pred HHHHhHHHhcCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-CCEEEEEe
Q 017536 112 AAVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGIL 190 (369)
Q Consensus 112 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~~~~~Gii 190 (369)
....+++++|. +++++++++++.++++.|.+++.+.+||++ +|+++|+|
T Consensus 83 ---------------------------~~~~~v~~~m~---~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~g~~vGiv 132 (153)
T 3oco_A 83 ---------------------------DDKAKISTIMR---DIVSVPENMKVPDVMEEMSAHRVPMAIVIDEYGGTSGII 132 (153)
T ss_dssp ---------------------------HTTSBGGGTCB---CCEEEETTSBHHHHHHHHHHTTCSCEEEECTTSCEEEEE
T ss_pred ---------------------------CCCCcHHHHhC---CCeEECCCCCHHHHHHHHHHcCCcEEEEEeCCCCEEEEe
Confidence 01456899993 588999999999999999999999999999 79999999
Q ss_pred ehHHHHHHHHh
Q 017536 191 TSKDILMRVIS 201 (369)
Q Consensus 191 t~~dll~~~~~ 201 (369)
|..|+++.+..
T Consensus 133 t~~dil~~l~~ 143 (153)
T 3oco_A 133 TDKDVYEELFG 143 (153)
T ss_dssp CHHHHHHHHHC
T ss_pred eHHHHHHHHhc
Confidence 99999955543
No 72
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.72 E-value=1.1e-16 Score=130.85 Aligned_cols=124 Identities=15% Similarity=0.241 Sum_probs=105.7
Q ss_pred CcccccccccccCCeEEeCCCcHHHHHHHHHhCCCeEeeEee-CCeEEEEEehHHHHHHHHHHHHHHHhhhhHHHHHHHh
Q 017536 38 LEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEG 116 (369)
Q Consensus 38 ~~~~~v~dim~~~~i~v~~~~~l~~a~~~m~~~~~~~lpVvd-~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~~ 116 (369)
+...+|+++|.+ ++++.+++++.+|++.|.+++++++||+| +|+++|+++..|++......
T Consensus 14 l~~~~v~~im~~-~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~----------------- 75 (159)
T 3fv6_A 14 LKKLQVKDFQSI-PVVIHENVSVYDAICTMFLEDVGTLFVVDRDAVLVGVLSRKDLLRASIGQ----------------- 75 (159)
T ss_dssp HTTCBGGGSCBC-CCEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHTSC-----------------
T ss_pred HhhCCHHHHcCC-CEEECCCCcHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHhhcc-----------------
Confidence 456799999987 56999999999999999999999999999 79999999999998652100
Q ss_pred HHHhcCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-CC---EEEEEeeh
Q 017536 117 VEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-EN---KPRGILTS 192 (369)
Q Consensus 117 ~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~~---~~~Giit~ 192 (369)
......+++++|.+..+++++++++++.++++.|.+++++++||++ +| +++|+||.
T Consensus 76 --------------------~~~~~~~v~~~m~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~~~vGiit~ 135 (159)
T 3fv6_A 76 --------------------QELTSVPVHIIMTRMPNITVCRREDYVMDIAKHLIEKQIDALPVIKDTDKGFEVIGRVTK 135 (159)
T ss_dssp --------------------SCTTTCBGGGTSEETTSCCCBCTTSBHHHHHHHHHHHTCSEEEEEEECSSSEEEEEEEEH
T ss_pred --------------------CcccCcCHHHHHcCCCCcEEECCCCCHHHHHHHHHHcCCcEEEEEeCCCcceeEEEEEEH
Confidence 0123457899998444789999999999999999999999999999 66 99999999
Q ss_pred HHHHHHH
Q 017536 193 KDILMRV 199 (369)
Q Consensus 193 ~dll~~~ 199 (369)
+|+++.+
T Consensus 136 ~dil~~l 142 (159)
T 3fv6_A 136 TNMTKIL 142 (159)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998443
No 73
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.71 E-value=6e-17 Score=144.86 Aligned_cols=122 Identities=21% Similarity=0.287 Sum_probs=107.7
Q ss_pred hCCCCccccccCCCceeEeCCCCcHHHHHHHHHHc-----CCceEEEEe-CCEEEEEeehHHHHHHHHhcCCCccccccc
Q 017536 139 MFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLEL-----RLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVE 212 (369)
Q Consensus 139 ~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~-----~~~~~~V~d-~~~~~Giit~~dll~~~~~~~~~~~~~~v~ 212 (369)
....+++++|+ ++++++++++++.++++.|.++ +++++||++ +++++|++|.+|++ .. ....++.
T Consensus 132 ~~~~~v~~iM~--~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll-~~------~~~~~v~ 202 (278)
T 2yvy_A 132 YEEDEAGGLMT--PEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLI-VA------DPRTRVA 202 (278)
T ss_dssp SCTTBGGGTCB--SCCCEECTTSBHHHHHHHHHHHTTTCSCSSEEEEECTTCBEEEEEEHHHHH-HS------CTTCBST
T ss_pred CCcchHHhhcC--CCceEECCCCcHHHHHHHHHHccCCccceeEEEEECCCCCEEEEEEHHHHh-cC------CCCCcHH
Confidence 35678999998 5899999999999999999987 789999999 89999999999997 32 1267899
Q ss_pred cccccCCceecCCCCHHHHHHHHHhCCCceeeEEcCCCcEEEEEeHHHHHHHHHHHh
Q 017536 213 KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATV 269 (369)
Q Consensus 213 ~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~di~~~~~~~~ 269 (369)
++|.++++++++++++.++++.|.+++.+.+||||++|+++|+||..|+++++.++.
T Consensus 203 ~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivT~~Dil~~i~~e~ 259 (278)
T 2yvy_A 203 EIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLEAEA 259 (278)
T ss_dssp TTSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHC----
T ss_pred HHhCCCCeEEeCCCCHHHHHHHHHhcCCCEEEEEeCCCeEEEEEEHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999766543
No 74
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.71 E-value=8.8e-17 Score=127.62 Aligned_cols=120 Identities=16% Similarity=0.208 Sum_probs=103.8
Q ss_pred ccccccc---cCCeEEeCCCcHHHHHHHHHhCCCeEeeEeeCCeEEEEEehHHHHHHHHHHHHHHHhhhhHHHHHHHhHH
Q 017536 42 PVSKVMT---RNPTFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVE 118 (369)
Q Consensus 42 ~v~dim~---~~~i~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (369)
+++++|. ++++++++++++.+|++.|.+++++.+||+|+|+++|+++..|+++.....
T Consensus 7 ~v~~im~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~Givt~~dl~~~~~~~------------------- 67 (135)
T 2rc3_A 7 TVKHLLQEKGHTVVAIGPDDSVFNAMQKMAADNIGALLVMKDEKLVGILTERDFSRKSYLL------------------- 67 (135)
T ss_dssp BHHHHHHHHCCCCCEECTTSBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHHGGGS-------------------
T ss_pred eHHHHHhcCCCCcEEECCCCcHHHHHHHHHhcCCCEEEEEECCEEEEEEehHHHHHHHHHc-------------------
Confidence 8999999 899999999999999999999999999999999999999999987532100
Q ss_pred HhcCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEeCCEEEEEeehHHHHHH
Q 017536 119 KHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMR 198 (369)
Q Consensus 119 ~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d~~~~~Giit~~dll~~ 198 (369)
+ ......+++++|. +++.++++++++.++++.|.+++.+++||+++|+++|++|.+|+++.
T Consensus 68 ---~--------------~~~~~~~v~~~m~--~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~g~~~Giit~~dll~~ 128 (135)
T 2rc3_A 68 ---D--------------KPVKDTQVKEIMT--RQVAYVDLNNTNEDCMALITEMRVRHLPVLDDGKVIGLLSIGDLVKD 128 (135)
T ss_dssp ---S--------------SCGGGSBGGGTSB--CSCCCBCTTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHH
T ss_pred ---C--------------CCcccCCHHHhcc--CCCeEECCCCcHHHHHHHHHHhCCCEEEEEeCCEEEEEEEHHHHHHH
Confidence 0 0012456899998 57899999999999999999999999999998999999999999843
Q ss_pred H
Q 017536 199 V 199 (369)
Q Consensus 199 ~ 199 (369)
+
T Consensus 129 ~ 129 (135)
T 2rc3_A 129 A 129 (135)
T ss_dssp H
T ss_pred H
Confidence 3
No 75
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.71 E-value=7.3e-17 Score=144.74 Aligned_cols=121 Identities=21% Similarity=0.287 Sum_probs=109.4
Q ss_pred CCCCccccccCCCceeEeCCCCcHHHHHHHHHHc-----CCceEEEEe-CCEEEEEeehHHHHHHHHhcCCCcccccccc
Q 017536 140 FRPSLSTIIPEKSKVVTISPTDTVLMATKKMLEL-----RLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEK 213 (369)
Q Consensus 140 ~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~-----~~~~~~V~d-~~~~~Giit~~dll~~~~~~~~~~~~~~v~~ 213 (369)
...+++++|+ ++++++++++++.++++.|.++ +++++||++ +++++|+||.+|++ .. ....++.+
T Consensus 135 ~~~~v~~iM~--~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVvd~~~~lvGivt~~dll-~~------~~~~~v~~ 205 (286)
T 2oux_A 135 EDETAGAIMT--TEFVSIVANQTVRSAMYVLKNQADMAETIYYVYVVDQENHLVGVISLRDLI-VN------DDDTLIAD 205 (286)
T ss_dssp CTTBHHHHCB--SCCCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEECTTCBEEEEEEHHHHT-TS------CTTSBHHH
T ss_pred ChHHHHHhCC--CCceEECCCCcHHHHHHHHHHcccCccceeEEEEEcCCCeEEEEEEHHHHH-cC------CCCCcHHH
Confidence 4567899998 5899999999999999999998 788999999 89999999999997 21 12678999
Q ss_pred ccccCCceecCCCCHHHHHHHHHhCCCceeeEEcCCCcEEEEEeHHHHHHHHHHHh
Q 017536 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVATV 269 (369)
Q Consensus 214 ~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~di~~~~~~~~ 269 (369)
+|.++++++++++++.+|++.|.+++.+++||||++|+++|+||..|+++.+..+.
T Consensus 206 im~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIT~~Dil~~i~~e~ 261 (286)
T 2oux_A 206 ILNERVISVHVGDDQEDVAQTIRDYDFLAVPVTDYDDHLLGIVTVDDIIDVIDDEA 261 (286)
T ss_dssp HSBSCCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHHHH
T ss_pred HcCCCCeeecCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999776554
No 76
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.70 E-value=1.3e-16 Score=130.26 Aligned_cols=140 Identities=18% Similarity=0.229 Sum_probs=108.8
Q ss_pred cCCCcccccccccccCCeEEeCCCcHHHHHHHHHhCCCeE-eeEeeCCeEEEEEehHHHHHHHHHHHHHHHhhhhHHHHH
Q 017536 35 ELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRH-LPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAA 113 (369)
Q Consensus 35 ~~~~~~~~v~dim~~~~i~v~~~~~l~~a~~~m~~~~~~~-lpVvd~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~ 113 (369)
+......+++++|+++++++.+++++.+|++.|.+++++. +||+|+++++|+++..|++......+ .
T Consensus 10 ~~~~~~~~v~~im~~~~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~~~~vGivt~~dl~~~~~~~~---~--------- 77 (157)
T 1o50_A 10 HHHMKVKDVCKLISLKPTVVEEDTPIEEIVDRILEDPVTRTVYVARDNKLVGMIPVMHLLKVSGFHF---F--------- 77 (157)
T ss_dssp CTTCBHHHHTTSSCCCCEEECTTCBHHHHHHHHHHSTTCCEEEEEETTEEEEEEEHHHHHHHHHHHH---H---------
T ss_pred hhhhccccHhhcccCCCceECCCCCHHHHHHHHHhCCCCccEEEEECCEEEEEEEHHHHHHHHhhhH---H---------
Confidence 3456678999999999999999999999999999999999 99999559999999999987643211 0
Q ss_pred HHhHHHhcCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-CCEEEEEeeh
Q 017536 114 VEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTS 192 (369)
Q Consensus 114 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~~~~~Giit~ 192 (369)
. .......+.. ........+++++|. + ++++++++++.++++.|.+++.+++||++ +|+++|+||.
T Consensus 78 --------~-~~~~~~~~~~-~~~~~~~~~v~~im~--~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~ 144 (157)
T 1o50_A 78 --------G-FIPKEELIRS-SMKRLIAKNASEIML--D-PVYVHMDTPLEEALKLMIDNNIQEMPVVDEKGEIVGDLNS 144 (157)
T ss_dssp --------C-CCC--------CCCCCSSCBHHHHCB--C-CCCBCTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEH
T ss_pred --------h-hhccHHHHHH-HHHHHcCCcHHHHcC--C-CeEECCCCCHHHHHHHHHHCCCcEEEEEcCCCEEEEEEEH
Confidence 0 0000000000 000123456889998 5 89999999999999999999999999999 8999999999
Q ss_pred HHHHHHH
Q 017536 193 KDILMRV 199 (369)
Q Consensus 193 ~dll~~~ 199 (369)
+|+++.+
T Consensus 145 ~dll~~l 151 (157)
T 1o50_A 145 LEILLAL 151 (157)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998443
No 77
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.70 E-value=1.4e-16 Score=126.87 Aligned_cols=125 Identities=22% Similarity=0.268 Sum_probs=107.0
Q ss_pred CCcccccccccccCCeEEeCCCcHHHHHHHHHhCCCeEeeEee-CCeEEEEEehHHHHHHHHHHHHHHHhhhhHHHHHHH
Q 017536 37 NLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVE 115 (369)
Q Consensus 37 ~~~~~~v~dim~~~~i~v~~~~~l~~a~~~m~~~~~~~lpVvd-~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~ 115 (369)
.+...+++++|.++++++++++++.+|++.|.+++++++||+| +|+++|+++..|+++..+..
T Consensus 3 ~l~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~---------------- 66 (138)
T 2yzi_A 3 MDMKAPIKVYMTKKLLGVKPSTSVQEASRLMMEFDVGSLVVINDDGNVVGFFTKSDIIRRVIVP---------------- 66 (138)
T ss_dssp CCTTSBGGGTCBCCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHTTTT----------------
T ss_pred chhhhhHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHhc----------------
Confidence 4567899999999999999999999999999999999999999 79999999999987431100
Q ss_pred hHHHhcCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-CCEEEEEeehHH
Q 017536 116 GVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKD 194 (369)
Q Consensus 116 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~~~~~Giit~~d 194 (369)
+ .....+++++|. +++.++++++++.++++.|.+++.+++ |++ +|+++|++|.+|
T Consensus 67 ------~---------------~~~~~~v~~~m~--~~~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd~~g~~~Giit~~d 122 (138)
T 2yzi_A 67 ------G---------------LPYDIPVERIMT--RNLITANVNTPLGEVLRKMAEHRIKHI-LIEEEGKIVGIFTLSD 122 (138)
T ss_dssp ------C---------------CCTTSBGGGTCB--CSCCEEETTSBHHHHHHHHHHHTCSEE-EEEETTEEEEEEEHHH
T ss_pred ------C---------------CcccCCHHHHhh--CCCeEECCCCcHHHHHHHHHhcCCCEE-EECCCCCEEEEEEHHH
Confidence 0 012456899998 578999999999999999999999999 998 999999999999
Q ss_pred HHHHHHhc
Q 017536 195 ILMRVISQ 202 (369)
Q Consensus 195 ll~~~~~~ 202 (369)
++ +.+..
T Consensus 123 il-~~~~~ 129 (138)
T 2yzi_A 123 LL-EASRR 129 (138)
T ss_dssp HH-HHHHC
T ss_pred HH-HHHHH
Confidence 98 44443
No 78
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.70 E-value=2.5e-17 Score=131.11 Aligned_cols=118 Identities=13% Similarity=0.163 Sum_probs=101.1
Q ss_pred ccccccccc--cCCeEEeCCCcHHHHHHHHHhCCCeEeeEee-C-CeEEEEEehHHHHHHHHHHHHHHHhhhhHHHHHHH
Q 017536 40 ETPVSKVMT--RNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-N-GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVE 115 (369)
Q Consensus 40 ~~~v~dim~--~~~i~v~~~~~l~~a~~~m~~~~~~~lpVvd-~-~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~ 115 (369)
+.+|+++|+ ++++++++++++.+|++.|.+++++++||++ + |+++|+++..|++.....
T Consensus 2 ~~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~----------------- 64 (136)
T 3lfr_A 2 DLQVRDIMVPRSQMISIKATQTPREFLPAVIDAAHSRYPVIGESHDDVLGVLLAKDLLPLILK----------------- 64 (136)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGGS-----------------
T ss_pred CCChHhccccHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHh-----------------
Confidence 468999999 6789999999999999999999999999998 4 799999999998754110
Q ss_pred hHHHhcCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-CCEEEEEeehHH
Q 017536 116 GVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKD 194 (369)
Q Consensus 116 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~~~~~Giit~~d 194 (369)
......+++++|.+ ++++++++++.++++.|.+++.+.+||++ +|+++|++|.+|
T Consensus 65 ---------------------~~~~~~~v~~~m~~---~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~D 120 (136)
T 3lfr_A 65 ---------------------ADGDSDDVKKLLRP---ATFVPESKRLNVLLREFRANHNHMAIVIDEYGGVAGLVTIED 120 (136)
T ss_dssp ---------------------SSGGGCCGGGTCBC---CCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHH
T ss_pred ---------------------ccCCCcCHHHHcCC---CeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHH
Confidence 00123468899963 88999999999999999999999999998 799999999999
Q ss_pred HHHH
Q 017536 195 ILMR 198 (369)
Q Consensus 195 ll~~ 198 (369)
+++.
T Consensus 121 il~~ 124 (136)
T 3lfr_A 121 VLEQ 124 (136)
T ss_dssp HHTT
T ss_pred HHHH
Confidence 9843
No 79
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.70 E-value=1.1e-16 Score=136.41 Aligned_cols=119 Identities=11% Similarity=0.056 Sum_probs=105.8
Q ss_pred CCCcccccccccccCCeEEeCCCcHHHHHHHHHhC---CCeEeeEee-CCeEEEEEehHHHHHHHHHHHHHHHhhhhHHH
Q 017536 36 LNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQG---KFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIA 111 (369)
Q Consensus 36 ~~~~~~~v~dim~~~~i~v~~~~~l~~a~~~m~~~---~~~~lpVvd-~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~ 111 (369)
..+.+.+++++|+++++++++++|+.+|++.|.++ +++.+||+| +|+++|+++.+|++..
T Consensus 49 l~~~~~~v~~iM~~~~~~v~~~~tv~eal~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~~---------------- 112 (205)
T 3kxr_A 49 DQYSENEIGRYTDHQMLVLSDKATVAQAQRFFRRIELDCNDNLFIVDEADKYLGTVRRYDIFKH---------------- 112 (205)
T ss_dssp HHSCTTCGGGGCBCCCCEEETTCBHHHHHHHHHHCCCTTCCEEEEECTTCBEEEEEEHHHHTTS----------------
T ss_pred hCCCcchHHhhccCceEEECCCCcHHHHHHHHHhhCccCeeEEEEEcCCCeEEEEEEHHHHHhC----------------
Confidence 35667899999999999999999999999999987 899999999 7999999999998632
Q ss_pred HHHHhHHHhcCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-CCEEEEEe
Q 017536 112 AAVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGIL 190 (369)
Q Consensus 112 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~~~~~Gii 190 (369)
....+++++|. ++++++++++++.++++.|.+++.+.+||+| +|+++|+|
T Consensus 113 ---------------------------~~~~~v~~im~--~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD~~g~lvGiI 163 (205)
T 3kxr_A 113 ---------------------------EPHEPLISLLS--EDSRALTANTTLLDAAEAIEHSREIELPVIDDAGELIGRV 163 (205)
T ss_dssp ---------------------------CTTSBGGGGCC--SSCCCEETTSCHHHHHHHHHTSSCSEEEEECTTSBEEEEE
T ss_pred ---------------------------CCcchHHHHhc--CCCeEECCCCCHHHHHHHHHhcCCCEEEEEcCCCeEEEEE
Confidence 12356899998 5789999999999999999999999999999 89999999
Q ss_pred ehHHHHHHH
Q 017536 191 TSKDILMRV 199 (369)
Q Consensus 191 t~~dll~~~ 199 (369)
|..|++..+
T Consensus 164 T~~Dil~~i 172 (205)
T 3kxr_A 164 TLRAATALV 172 (205)
T ss_dssp EHHHHHHHH
T ss_pred EHHHHHHHH
Confidence 999998443
No 80
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.70 E-value=1.7e-16 Score=128.30 Aligned_cols=117 Identities=15% Similarity=0.193 Sum_probs=102.2
Q ss_pred ccccccccc--CCeEEeCCCcHHHHHHHHHhCCCeEeeEee-CCeEEEEEehHHHHHHHHHHHHHHHhhhhHHHHHHHhH
Q 017536 41 TPVSKVMTR--NPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGV 117 (369)
Q Consensus 41 ~~v~dim~~--~~i~v~~~~~l~~a~~~m~~~~~~~lpVvd-~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~~~ 117 (369)
.+++++|.+ +++++.+++++.+|++.|.+++++++||+| +|+++|+++..|++.....
T Consensus 28 ~~v~dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~------------------- 88 (149)
T 3k2v_A 28 LRVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDDDMNIIGIFTDGDLRRVFDT------------------- 88 (149)
T ss_dssp SBGGGTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECTTCBEEEEEEHHHHHHHHCS-------------------
T ss_pred cCHHHHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECCCCcEEEEecHHHHHHHHhc-------------------
Confidence 589999998 999999999999999999999999999999 7999999999999864210
Q ss_pred HHhcCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEeCCEEEEEeehHHHH
Q 017536 118 EKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDIL 196 (369)
Q Consensus 118 ~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d~~~~~Giit~~dll 196 (369)
+. .....+++++|. ++++++++++++.++++.|.+++.+++||+++++++|+||.+|++
T Consensus 89 ----~~--------------~~~~~~v~~~m~--~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~Giit~~dil 147 (149)
T 3k2v_A 89 ----GV--------------DMRDASIADVMT--RGGIRIRPGTLAVDALNLMQSRHITCVLVADGDHLLGVVHMHDLL 147 (149)
T ss_dssp ----SS--------------CCTTCBHHHHSE--ESCCEECTTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHT
T ss_pred ----CC--------------CcccCcHHHHcC--CCCeEECCCCCHHHHHHHHHHcCCCEEEEecCCEEEEEEEHHHhh
Confidence 00 013456888887 568899999999999999999999999999966999999999986
No 81
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.69 E-value=8.3e-18 Score=137.20 Aligned_cols=118 Identities=18% Similarity=0.230 Sum_probs=102.1
Q ss_pred CCCccccccccccc--CCeEEeCCCcHHHHHHHHHhCCCeEeeEee-C-CeEEEEEehHHHHHHHHHHHHHHHhhhhHHH
Q 017536 36 LNLEETPVSKVMTR--NPTFVLSDTLAVEALQKMVQGKFRHLPVVE-N-GEVIALLDIAKCLYDAIARMERAAEKGKAIA 111 (369)
Q Consensus 36 ~~~~~~~v~dim~~--~~i~v~~~~~l~~a~~~m~~~~~~~lpVvd-~-~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~ 111 (369)
..+...+|+++|++ +++++++++++.+|++.|.+++++++||++ + ++++|+++..|++.....
T Consensus 33 ~~l~~~~v~diM~~~~~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~------------- 99 (156)
T 3oi8_A 33 LDFSDLEVRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLLKYMFN------------- 99 (156)
T ss_dssp HHHTTCBGGGTCEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGSSC-------------
T ss_pred hccCCCCHhheeeeHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHc-------------
Confidence 35667899999996 789999999999999999999999999998 4 599999999998753110
Q ss_pred HHHHhHHHhcCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-CCEEEEEe
Q 017536 112 AAVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGIL 190 (369)
Q Consensus 112 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~~~~~Gii 190 (369)
....+++++|.+ ++++++++++.++++.|.+++.+.+||+| +|+++|++
T Consensus 100 ---------------------------~~~~~v~~im~~---~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~g~~~Giv 149 (156)
T 3oi8_A 100 ---------------------------PEQFHLKSILRP---AVFVPEGKSLTALLKEFREQRNHMAIVIDEYGGTSGLV 149 (156)
T ss_dssp ---------------------------GGGCCHHHHCBC---CCEEETTSBHHHHHHHHHHTTCCEEEEECTTSSEEEEE
T ss_pred ---------------------------CCcccHHHHcCC---CEEECCCCCHHHHHHHHHhcCCeEEEEECCCCCEEEEE
Confidence 023457888863 88999999999999999999999999998 79999999
Q ss_pred ehHHHH
Q 017536 191 TSKDIL 196 (369)
Q Consensus 191 t~~dll 196 (369)
|.+|++
T Consensus 150 t~~Dil 155 (156)
T 3oi8_A 150 TFEDII 155 (156)
T ss_dssp EHHHHC
T ss_pred EHHHhc
Confidence 999985
No 82
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.69 E-value=4.4e-16 Score=124.53 Aligned_cols=116 Identities=16% Similarity=0.212 Sum_probs=101.6
Q ss_pred ccccccccccCCeEEeCCCcHHHHHHHHHhCCCeEeeEee-CC--eEEEEEehHHHHHHHHHHHHHHHhhhhHHHHHHHh
Q 017536 40 ETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NG--EVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEG 116 (369)
Q Consensus 40 ~~~v~dim~~~~i~v~~~~~l~~a~~~m~~~~~~~lpVvd-~~--~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~~ 116 (369)
..+++++|.++++++.+++++.+|++.|.+++++++||+| ++ +++|+++..|++......
T Consensus 4 ~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~Givt~~dl~~~~~~~----------------- 66 (141)
T 2rih_A 4 AIRTSELLKRPPVSLPETATIREVATELAKNRVGLAVLTARDNPKRPVAVVSERDILRAVAQR----------------- 66 (141)
T ss_dssp -CBGGGGCCSCCEEEETTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEEEEHHHHHHHHHTT-----------------
T ss_pred ceEHHHHhcCCCeEeCCCCcHHHHHHHHHHcCCCEEEEEcCCCcceeEEEEEHHHHHHHHhcC-----------------
Confidence 4689999999999999999999999999999999999999 46 999999999987652100
Q ss_pred HHHhcCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-CCEEEEEeehHHH
Q 017536 117 VEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDI 195 (369)
Q Consensus 117 ~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~~~~~Giit~~dl 195 (369)
.....+++++|. +++++++++ ++.++++.|.+++.+++||++ +|+++|++|.+|+
T Consensus 67 ---------------------~~~~~~v~~~m~--~~~~~v~~~-~l~~a~~~m~~~~~~~l~Vvd~~g~~~Giit~~dl 122 (141)
T 2rih_A 67 ---------------------LDLDGPAMPIAN--SPITVLDTD-PVHVAAEKMRRHNIRHVVVVNKNGELVGVLSIRDL 122 (141)
T ss_dssp ---------------------CCTTSBSGGGCB--CCCEEETTS-BHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHH
T ss_pred ---------------------CCCCCCHHHHcC--CCCeEEcCC-CHHHHHHHHHHcCCeEEEEEcCCCcEEEEEEHHHH
Confidence 012356899998 579999999 999999999999999999999 8999999999999
Q ss_pred H
Q 017536 196 L 196 (369)
Q Consensus 196 l 196 (369)
+
T Consensus 123 l 123 (141)
T 2rih_A 123 C 123 (141)
T ss_dssp H
T ss_pred H
Confidence 7
No 83
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.69 E-value=3.2e-16 Score=128.62 Aligned_cols=131 Identities=18% Similarity=0.190 Sum_probs=103.7
Q ss_pred CCcccccccccccCCeEEeCCCcHHHHHHHHHhCCCeEeeEee---CCeEEEEEehHHHHHHHHHHHHHHHhhhhHHHHH
Q 017536 37 NLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE---NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAA 113 (369)
Q Consensus 37 ~~~~~~v~dim~~~~i~v~~~~~l~~a~~~m~~~~~~~lpVvd---~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~ 113 (369)
.....+++++|.++++++.+++++.+|++.|.+++++++||+| +|+++|+++..|++.........
T Consensus 9 ~~~~~~v~dim~~~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~~~~~~~~Givt~~dl~~~~~~~~~~----------- 77 (164)
T 2pfi_A 9 GSHHVRVEHFMNHSITTLAKDTPLEEVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLVQALQAEPPS----------- 77 (164)
T ss_dssp -CCSCBHHHHCBCCCCCEETTCBHHHHHHHHHTCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHC---------------
T ss_pred cccCCCHHHHcCCCCeEECCCCcHHHHHHHHHhCCCCceeEEecCCCCEEEEEEEHHHHHHHHHhhccc-----------
Confidence 4557899999999999999999999999999999999999998 48999999999987653211000
Q ss_pred HHhHHHhcCCCCCChhhHHHHHHHHhCCCCccccccCC----CceeEeCCCCcHHHHHHHHHHcCCceEEEEeCCEEEEE
Q 017536 114 VEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEK----SKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGI 189 (369)
Q Consensus 114 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~----~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d~~~~~Gi 189 (369)
.......++.++|.+. ..+.++++++++.++++.|.+++.+++||+++|+++|+
T Consensus 78 ----------------------~~~~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~g~l~Gi 135 (164)
T 2pfi_A 78 ----------------------RAPGHQQCLQDILARGCPTEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTSRGRAVGC 135 (164)
T ss_dssp -------------------------CCCCBHHHHHHTTCCCBCCCCCEETTCBHHHHHHHHHHTTCSEEEEEETTEEEEE
T ss_pred ----------------------cCCcccchhhhhhcccccccCCceEECCCCcHHHHHHHHHHhCCCEEEEEECCEEEEE
Confidence 0001223455666531 11688999999999999999999999999999999999
Q ss_pred eehHHHHHHHH
Q 017536 190 LTSKDILMRVI 200 (369)
Q Consensus 190 it~~dll~~~~ 200 (369)
||.+|+++.+.
T Consensus 136 it~~dil~~~~ 146 (164)
T 2pfi_A 136 VSWVEMKKAIS 146 (164)
T ss_dssp EEHHHHHHHHH
T ss_pred EEHHHHHHHHH
Confidence 99999984443
No 84
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.68 E-value=2.1e-16 Score=127.90 Aligned_cols=135 Identities=18% Similarity=0.223 Sum_probs=104.5
Q ss_pred cccccccccc--CCeEEeCCCcHHHHHHHHHhCCCeEeeEee-CCeEEEEEehHHHHHHHHHHHHHHHhhhhHHHHHHHh
Q 017536 40 ETPVSKVMTR--NPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEG 116 (369)
Q Consensus 40 ~~~v~dim~~--~~i~v~~~~~l~~a~~~m~~~~~~~lpVvd-~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~~ 116 (369)
..+++++|.+ +++++.+++++.+|++.|.+++++++||+| +|+++|+++..|++........ .. .
T Consensus 4 ~~~v~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~~~~~~~-----~~----~--- 71 (152)
T 4gqw_A 4 VYTVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDEDWKLVGLVSDYDLLALDSGDST-----WK----T--- 71 (152)
T ss_dssp CSBGGGTSEESTTCCCBCTTSBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHTTCC----C-----CH----H---
T ss_pred eEEhhhccCCCCCCeEECCCCcHHHHHHHHHHcCCceEEEEeCCCeEEEEEEHHHHHHhhcccCc-----cc----c---
Confidence 5789999998 899999999999999999999999999999 6899999999998753110000 00 0
Q ss_pred HHHhcCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-CCEEEEEeehHHH
Q 017536 117 VEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDI 195 (369)
Q Consensus 117 ~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~~~~~Giit~~dl 195 (369)
..............+++++|. ++++++++++++.++++.|.+++.+++||++ +|+++|+||.+|+
T Consensus 72 ------------~~~~~~~~~~~~~~~v~~~m~--~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Giit~~di 137 (152)
T 4gqw_A 72 ------------FNAVQKLLSKTNGKLVGDLMT--PAPLVVEEKTNLEDAAKILLETKYRRLPVVDSDGKLVGIITRGNV 137 (152)
T ss_dssp ------------HHHHHTC-----CCBHHHHSE--ESCCCEESSSBHHHHHHHHHHSSCCEEEEECTTSBEEEEEEHHHH
T ss_pred ------------hHHHHHHHHHhccccHHHhcC--CCceEECCCCcHHHHHHHHHHCCCCEEEEECCCCcEEEEEEHHHH
Confidence 000000111233467899998 4688899999999999999999999999999 8999999999999
Q ss_pred HHHHH
Q 017536 196 LMRVI 200 (369)
Q Consensus 196 l~~~~ 200 (369)
++.+.
T Consensus 138 l~~~~ 142 (152)
T 4gqw_A 138 VRAAL 142 (152)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 84443
No 85
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.68 E-value=3.3e-16 Score=124.71 Aligned_cols=121 Identities=26% Similarity=0.352 Sum_probs=103.6
Q ss_pred CcccccccccccCCeEEeCCCcHHHHHHHHHhCCCeEeeEee-CCeEEEEEehHHH-HHHHHHHHHHHHhhhhHHHHHHH
Q 017536 38 LEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKC-LYDAIARMERAAEKGKAIAAAVE 115 (369)
Q Consensus 38 ~~~~~v~dim~~~~i~v~~~~~l~~a~~~m~~~~~~~lpVvd-~~~~vGiv~~~di-l~~~~~~~~~~~~~~~~~~~~~~ 115 (369)
+.+.+++++|.++++++.+++++.+|++.|.+++++++||+| +|+++|+++..++ +.....
T Consensus 5 l~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~----------------- 67 (138)
T 2p9m_A 5 LKNIKVKDVMTKNVITAKRHEGVVEAFEKMLKYKISSLPVIDDENKVIGIVTTTDIGYNLIRD----------------- 67 (138)
T ss_dssp CTTCBGGGTSBCSCCCEETTSBHHHHHHHHHHHTCCEEEEECTTCBEEEEEEHHHHHHHHTTT-----------------
T ss_pred cccCCHHHhhcCCceEECCCCcHHHHHHHHHHCCCcEEEEECCCCeEEEEEEHHHHHHHHHhh-----------------
Confidence 456799999999999999999999999999999999999998 7999999999998 653110
Q ss_pred hHHHhcCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcC-----CceEEEEe-CCEEEEE
Q 017536 116 GVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELR-----LSSAVVTV-ENKPRGI 189 (369)
Q Consensus 116 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~-----~~~~~V~d-~~~~~Gi 189 (369)
......+++++|. +++.++++++++.++++.|.+++ .+++||++ +|+++|+
T Consensus 68 ---------------------~~~~~~~v~~~m~--~~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd~~g~~~Gi 124 (138)
T 2p9m_A 68 ---------------------KYTLETTIGDVMT--KDVITIHEDASILEAIKKMDISGKKEEIINQLPVVDKNNKLVGI 124 (138)
T ss_dssp ---------------------CCCSSCBHHHHSC--SSCCCEETTSBHHHHHHHHTCC-----CCCEEEEECTTSBEEEE
T ss_pred ---------------------cccCCcCHHHHhC--CCcEEECCCCCHHHHHHHHHhcCCccccccEEEEECCCCeEEEE
Confidence 0022456788887 57889999999999999999999 99999999 8999999
Q ss_pred eehHHHHHH
Q 017536 190 LTSKDILMR 198 (369)
Q Consensus 190 it~~dll~~ 198 (369)
+|.+|+++.
T Consensus 125 it~~dll~~ 133 (138)
T 2p9m_A 125 ISDGDIIRT 133 (138)
T ss_dssp EEHHHHHHH
T ss_pred EEHHHHHHH
Confidence 999999843
No 86
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.68 E-value=2e-16 Score=127.91 Aligned_cols=127 Identities=17% Similarity=0.197 Sum_probs=104.2
Q ss_pred Ccccccccccc--cCCeEEeCCCcHHHHHHHHHhCCCeEeeEee-CCeEEEEEehHHHHHHHHHHHHHHHhhhhHHHHHH
Q 017536 38 LEETPVSKVMT--RNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAV 114 (369)
Q Consensus 38 ~~~~~v~dim~--~~~i~v~~~~~l~~a~~~m~~~~~~~lpVvd-~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~ 114 (369)
+...+++++|. ++++++.+++++.+|++.|.+++++++||+| +|+++|+++..|++......
T Consensus 12 l~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~--------------- 76 (150)
T 3lqn_A 12 FQQIFVKDLMISSEKVAHVQIGNGLEHALLVLVKSGYSAIPVLDPMYKLHGLISTAMILDGILGL--------------- 76 (150)
T ss_dssp HHHCBHHHHSEEGGGSCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHTBCS---------------
T ss_pred hhcCChhhcccCCCceEEECCCCcHHHHHHHHHHcCCcEEEEECCCCCEEEEEEHHHHHHHHHhh---------------
Confidence 34679999999 4699999999999999999999999999998 79999999999998652100
Q ss_pred HhHHHhcCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-CCEEEEEeehH
Q 017536 115 EGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSK 193 (369)
Q Consensus 115 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~~~~~Giit~~ 193 (369)
.. .. .......+++++|. +++.++++++++.++++.|.++++ +||++ +|+++|+||..
T Consensus 77 --------~~-~~--------~~~~~~~~v~~~m~--~~~~~v~~~~~l~~a~~~~~~~~~--l~Vvd~~g~~~Giit~~ 135 (150)
T 3lqn_A 77 --------ER-IE--------FERLEEMKVEQVMK--QDIPVLKLEDSFAKALEMTIDHPF--ICAVNEDGYFEGILTRR 135 (150)
T ss_dssp --------SS-BC--------GGGGGGCBGGGTCB--SSCCEEETTCBHHHHHHHHHHCSE--EEEECTTCBEEEEEEHH
T ss_pred --------cc-cc--------hhHHhcCCHHHHhc--CCCceeCCCCCHHHHHHHHHhCCE--EEEECCCCcEEEEEEHH
Confidence 00 00 00123457899998 578999999999999999999886 99999 89999999999
Q ss_pred HHHHHHH
Q 017536 194 DILMRVI 200 (369)
Q Consensus 194 dll~~~~ 200 (369)
|+++.+.
T Consensus 136 dil~~l~ 142 (150)
T 3lqn_A 136 AILKLLN 142 (150)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9984443
No 87
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.67 E-value=3.4e-16 Score=136.74 Aligned_cols=126 Identities=15% Similarity=0.095 Sum_probs=103.8
Q ss_pred CCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEeC---CEEEEEeehHHHHHHHHhc---CCC--------
Q 017536 140 FRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVE---NKPRGILTSKDILMRVISQ---NLP-------- 205 (369)
Q Consensus 140 ~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d~---~~~~Giit~~dll~~~~~~---~~~-------- 205 (369)
...+++++|+ ++++++.+++++.+|.++|.+++++++||+++ ++++|+||.+|+++.+... ...
T Consensus 11 ~~~~v~diMt--~~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~~~~~~LvGiIt~~dl~~~l~~~~~~~~~~~~~~~~~ 88 (250)
T 2d4z_A 11 YNIQVGDIMV--RDVTSIASTSTYGDLLHVLRQTKLKFFPFVDTPDTNTLLGSIDRTEVEGLLQRRISAYRRQPAAAAEA 88 (250)
T ss_dssp SSCBTTSSSB--SSCCCEETTCBHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHHTTSSSCCCCCCB
T ss_pred CCCChHHhcC--CCCeEECCCCCHHHHHHHHHhcCCCEEEEEecCCCCeEEEEEEHHHHHHHHHHhhhhhhhhhhhhhcc
Confidence 4567999998 68999999999999999999999999999983 5899999999998432211 000
Q ss_pred ----------------------c---------------------------------------------------------
Q 017536 206 ----------------------A--------------------------------------------------------- 206 (369)
Q Consensus 206 ----------------------~--------------------------------------------------------- 206 (369)
.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (250)
T 2d4z_A 89 DEEGRNGETGASFTGEAESSFAYIDQEDAEGQQREGLEAVKVQTEDPRPPSPVPAEEPTQTSGIYQKKQKGTGQVASRFE 168 (250)
T ss_dssp CCC---------------------------------------------------------------------------CC
T ss_pred cccccccccccccccCCcceeeeccccccccccccCccccCCcccCCccccccccccccccccccccccccccccCcccc
Confidence 0
Q ss_pred ---------------ccccc--c-cccccCCceecCCCCHHHHHHHHHhCCCceeeEEcCCCcEEEEEeHHHHHHHHHHH
Q 017536 207 ---------------DSTLV--E-KVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVAT 268 (369)
Q Consensus 207 ---------------~~~~v--~-~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~di~~~~~~~ 268 (369)
...++ . .+|.+.|+++.+++++.++..+|...+++++||++ .|+++||||+.||++++.+.
T Consensus 169 ~~i~~~~~~~~~~~~l~~~Vdl~~~~md~sP~tv~~~tsL~~v~~LF~~lglr~l~V~~-~GrLVGIVTrkDl~kai~~~ 247 (250)
T 2d4z_A 169 EMLTLEEIYRWEQREKNVVVNFETCRIDQSPFQLVEGTSLQKTHTLFSLLGLDRAYVTS-MGKLVGVVALAEIQAAIEGS 247 (250)
T ss_dssp SCCBHHHHHHHHHHHTTCBCCTTSSCEECCSCCBCTTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHC-
T ss_pred cccChhhhhhHHHHhcCceeccccccccCCCeEECCCCcHHHHHHHHHHhCCeEEEEEE-CCEEEEEEEHHHHHHHHHHH
Confidence 01222 2 36889999999999999999999999999999997 79999999999999987643
No 88
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.67 E-value=2.3e-15 Score=131.49 Aligned_cols=161 Identities=17% Similarity=0.166 Sum_probs=110.3
Q ss_pred CCcccccccccccCCeEEeCCCcHHHHHHHHHhCCCeEeeEeeC---CeEEEEEehHHHHHHHHHHHHHHHhh-------
Q 017536 37 NLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVEN---GEVIALLDIAKCLYDAIARMERAAEK------- 106 (369)
Q Consensus 37 ~~~~~~v~dim~~~~i~v~~~~~l~~a~~~m~~~~~~~lpVvd~---~~~vGiv~~~dil~~~~~~~~~~~~~------- 106 (369)
....++|+|+|+++++++.+++++.+|.++|.+++++++||+|+ ++++|+|+..|+++.+..........
T Consensus 9 ~~~~~~v~diMt~~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~~~~~~LvGiIt~~dl~~~l~~~~~~~~~~~~~~~~~ 88 (250)
T 2d4z_A 9 NKYNIQVGDIMVRDVTSIASTSTYGDLLHVLRQTKLKFFPFVDTPDTNTLLGSIDRTEVEGLLQRRISAYRRQPAAAAEA 88 (250)
T ss_dssp CCSSCBTTSSSBSSCCCEETTCBHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHHTTSSSCCCCCCB
T ss_pred ccCCCChHHhcCCCCeEECCCCCHHHHHHHHHhcCCCEEEEEecCCCCeEEEEEEHHHHHHHHHHhhhhhhhhhhhhhcc
Confidence 44578999999999999999999999999999999999999984 58999999999998654432111000
Q ss_pred ----------------hhHHHHHHHhHH----HhcC-------------------------------------------C
Q 017536 107 ----------------GKAIAAAVEGVE----KHWG-------------------------------------------T 123 (369)
Q Consensus 107 ----------------~~~~~~~~~~~~----~~~g-------------------------------------------~ 123 (369)
............ .+.| .
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (250)
T 2d4z_A 89 DEEGRNGETGASFTGEAESSFAYIDQEDAEGQQREGLEAVKVQTEDPRPPSPVPAEEPTQTSGIYQKKQKGTGQVASRFE 168 (250)
T ss_dssp CCC---------------------------------------------------------------------------CC
T ss_pred cccccccccccccccCCcceeeeccccccccccccCccccCCcccCCccccccccccccccccccccccccccccCcccc
Confidence 000000000000 0000 0
Q ss_pred CCCChhhHHHHHHHHhCCCCc--c-ccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEeCCEEEEEeehHHHHHHHH
Q 017536 124 SISGPNTFIETLRERMFRPSL--S-TIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVI 200 (369)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~v--~-~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d~~~~~Giit~~dll~~~~ 200 (369)
....+.. .....+.....++ + .+|. +.++++.+++++.++..+|.+.|.+++||++.|+++||||.+|++ +++
T Consensus 169 ~~i~~~~-~~~~~~~~l~~~Vdl~~~~md--~sP~tv~~~tsL~~v~~LF~~lglr~l~V~~~GrLVGIVTrkDl~-kai 244 (250)
T 2d4z_A 169 EMLTLEE-IYRWEQREKNVVVNFETCRID--QSPFQLVEGTSLQKTHTLFSLLGLDRAYVTSMGKLVGVVALAEIQ-AAI 244 (250)
T ss_dssp SCCBHHH-HHHHHHHHTTCBCCTTSSCEE--CCSCCBCTTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHH-HHH
T ss_pred cccChhh-hhhHHHHhcCceecccccccc--CCCeEECCCCcHHHHHHHHHHhCCeEEEEEECCEEEEEEEHHHHH-HHH
Confidence 0000001 1111122233445 3 3687 679999999999999999999999999999999999999999998 555
Q ss_pred h
Q 017536 201 S 201 (369)
Q Consensus 201 ~ 201 (369)
.
T Consensus 245 ~ 245 (250)
T 2d4z_A 245 E 245 (250)
T ss_dssp H
T ss_pred H
Confidence 4
No 89
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.67 E-value=6.6e-16 Score=129.38 Aligned_cols=148 Identities=16% Similarity=0.155 Sum_probs=107.2
Q ss_pred CcccccccccccC----CeEE--eCCCcHHHHHHHHHhCCCeEeeEe--e-CCeEEEEEehHHHHHHHHHHHHHHHhhhh
Q 017536 38 LEETPVSKVMTRN----PTFV--LSDTLAVEALQKMVQGKFRHLPVV--E-NGEVIALLDIAKCLYDAIARMERAAEKGK 108 (369)
Q Consensus 38 ~~~~~v~dim~~~----~i~v--~~~~~l~~a~~~m~~~~~~~lpVv--d-~~~~vGiv~~~dil~~~~~~~~~~~~~~~ 108 (369)
....+|+++|+++ ++++ .+++++.+|++.|.+++++++||+ | +|+++|+++..|++.......... .
T Consensus 8 ~~~~~v~dim~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~d~~~~lvGiit~~dl~~~~~~~~~~~---~- 83 (185)
T 2j9l_A 8 AHKTLAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIENARKKQ---D- 83 (185)
T ss_dssp -CCCBHHHHSBSCTTSCCCCCEESSCEEHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHTSC---S-
T ss_pred hccCcHHHHhcccccCceEEEecCCCccHHHHHHHHHhcCCCceeEEEECCCCeEEEEEEHHHHHHHHHhhcccC---C-
Confidence 3467999999987 7888 999999999999999999999999 5 699999999999987643211000 0
Q ss_pred HHHHHHHhHHHhcCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEeCCEEEE
Q 017536 109 AIAAAVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRG 188 (369)
Q Consensus 109 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d~~~~~G 188 (369)
.........+... .... ........+++++|. ++++++++++++.++++.|.+++.+++||+++|+++|
T Consensus 84 ---~~~~~~~~~~~~~-~~~~-----~~~~~~~~~v~~im~--~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~g~~vG 152 (185)
T 2j9l_A 84 ---GVVSTSIIYFTEH-SPPL-----PPYTPPTLKLRNILD--LSPFTVTDLTPMEIVVDIFRKLGLRQCLVTHNGRLLG 152 (185)
T ss_dssp ---CCCTTCEEECSSS-CCCC-----CTTCCCCEECGGGEE--SSCCEEETTSBHHHHHHHHHHHTCSEEEEEETTEEEE
T ss_pred ---CccccceeecccC-Cccc-----ccccccCccHHHhhC--cCCeEeCCCCCHHHHHHHHHhCCCcEEEEEECCEEEE
Confidence 0000000000000 0000 000123456889997 5789999999999999999999999999999999999
Q ss_pred EeehHHHHHHHH
Q 017536 189 ILTSKDILMRVI 200 (369)
Q Consensus 189 iit~~dll~~~~ 200 (369)
+||.+|+++.+.
T Consensus 153 iit~~dll~~l~ 164 (185)
T 2j9l_A 153 IITKKDVLKHIA 164 (185)
T ss_dssp EEEHHHHHHHHH
T ss_pred EEEHHHHHHHHH
Confidence 999999984444
No 90
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.66 E-value=5.4e-16 Score=124.31 Aligned_cols=126 Identities=19% Similarity=0.274 Sum_probs=102.0
Q ss_pred ccccccc---ccccCCeEEeCCCcHHHHHHHHHhCCCeEeeEee-CCeEEEEEehHHHHHHHHHHHHHHHhhhhHHHHHH
Q 017536 39 EETPVSK---VMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAV 114 (369)
Q Consensus 39 ~~~~v~d---im~~~~i~v~~~~~l~~a~~~m~~~~~~~lpVvd-~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~ 114 (369)
.+.++++ +|.++++++.+++++.+|++.|.+++++.+||+| +|+++|+++..|++.......
T Consensus 6 ~~~~v~~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~-------------- 71 (144)
T 2nyc_A 6 LKIPIGDLNIITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLGLIKGGI-------------- 71 (144)
T ss_dssp GGSBGGGSSCCBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHTC---------------
T ss_pred hhcchhhcCCCCCCCceEECCCCcHHHHHHHHHHcCcceeeEEcCCCcEEEEEcHHHHHHHhcccc--------------
Confidence 3567888 8889999999999999999999999999999998 799999999999876522100
Q ss_pred HhHHHhcCCCCCChhhHHHHHHHHhCCCCccccccCCC----ceeEeCCCCcHHHHHHHHHHcCCceEEEEe-CCEEEEE
Q 017536 115 EGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKS----KVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGI 189 (369)
Q Consensus 115 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~----~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~~~~~Gi 189 (369)
......+++++|.+.. ++.++++++++.++++.|.+++.+++||++ +|+++|+
T Consensus 72 ----------------------~~~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Gi 129 (144)
T 2nyc_A 72 ----------------------YNDLSLSVGEALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGV 129 (144)
T ss_dssp -------------------------CCSBHHHHHHHCC------CEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEE
T ss_pred ----------------------cccCCccHHHHHhcCccccCCCeEECCCCcHHHHHHHHHHCCCCEEEEECCCCCEEEE
Confidence 0012345777776321 588999999999999999999999999999 8999999
Q ss_pred eehHHHHHHHH
Q 017536 190 LTSKDILMRVI 200 (369)
Q Consensus 190 it~~dll~~~~ 200 (369)
+|.+|+++.+.
T Consensus 130 it~~dil~~l~ 140 (144)
T 2nyc_A 130 LTLSDILKYIL 140 (144)
T ss_dssp EEHHHHHHHHH
T ss_pred EEHHHHHHHHH
Confidence 99999984443
No 91
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.66 E-value=2.6e-16 Score=131.19 Aligned_cols=149 Identities=17% Similarity=0.195 Sum_probs=107.7
Q ss_pred cccccccccc--CCeEEeCCCcHHHHHHHHHhCCCeEeeEee-CCeEEEEEehHHHHHHHHHHHHHHHhhhhHHHHHHHh
Q 017536 40 ETPVSKVMTR--NPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEG 116 (369)
Q Consensus 40 ~~~v~dim~~--~~i~v~~~~~l~~a~~~m~~~~~~~lpVvd-~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~~ 116 (369)
..+|+++|.+ +++++.+++++.+|+++|.+++++++||+| +|+++|+++..|+++.......... .....
T Consensus 3 ~~~v~dim~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~-----~~~~~-- 75 (180)
T 3sl7_A 3 GYTVGDFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDDNWTLVGVVSDYDLLALDSISGRSQN-----DTNLF-- 75 (180)
T ss_dssp CCBHHHHSEEGGGCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHTCC---------------------
T ss_pred ceeHHHhcCCCCCceeeCCCCcHHHHHHHHHHcCCCeEEEECCCCeEEEEEEHHHHHhhhhhccccCC-----ccccc--
Confidence 3689999998 899999999999999999999999999999 7999999999999753211000000 00000
Q ss_pred HHHhcCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-CCEEEEEeehHHH
Q 017536 117 VEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDI 195 (369)
Q Consensus 117 ~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~~~~~Giit~~dl 195 (369)
...+.... ...............+++++|. ++++++++++++.++++.|.+++++++||++ +|+++|+||.+|+
T Consensus 76 --~~~~~~~~-~~~~~~~~~~~~~~~~v~~~m~--~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~di 150 (180)
T 3sl7_A 76 --PDVDSTWK-TFNELQKLISKTYGKVVGDLMT--PSPLVVRDSTNLEDAARLLLETKFRRLPVVDADGKLIGILTRGNV 150 (180)
T ss_dssp -------CCC-SHHHHHHHHHTTTTCBHHHHSE--ESCCCEETTSBHHHHHHHHTTSTTCEEEEECTTCBEEEEEEHHHH
T ss_pred --ccccchhh-hhHHHHHHHhccccccHHHHhC--CCceEeCCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHH
Confidence 00000000 0111112222345667999998 5688999999999999999999999999999 8999999999999
Q ss_pred HHHHH
Q 017536 196 LMRVI 200 (369)
Q Consensus 196 l~~~~ 200 (369)
++.+.
T Consensus 151 l~~~~ 155 (180)
T 3sl7_A 151 VRAAL 155 (180)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 85444
No 92
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.66 E-value=3.2e-16 Score=123.97 Aligned_cols=119 Identities=18% Similarity=0.200 Sum_probs=101.5
Q ss_pred ccccccccccCCeEEeCCCcHHHHHHHHHhCCCeEeeEee-CCeEEEEEehHHHHHHHHHHHHHHHhhhhHHHHHHHhHH
Q 017536 40 ETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVE 118 (369)
Q Consensus 40 ~~~v~dim~~~~i~v~~~~~l~~a~~~m~~~~~~~lpVvd-~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (369)
..+++++|.++++++.+++++.+|++.|.+++++++||+| +|+++|+++..|++...+..
T Consensus 7 ~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~------------------- 67 (133)
T 1y5h_A 7 MTTARDIMNAGVTCVGEHETLTAAAQYMREHDIGALPICGDDDRLHGMLTDRDIVIKGLAA------------------- 67 (133)
T ss_dssp -CCHHHHSEETCCCEETTSBHHHHHHHHHHHTCSEEEEECGGGBEEEEEEHHHHHHTTGGG-------------------
T ss_pred hcCHHHHhcCCceEeCCCCCHHHHHHHHHHhCCCeEEEECCCCeEEEEEeHHHHHHHHHhc-------------------
Confidence 3589999999999999999999999999999999999997 79999999999987421100
Q ss_pred HhcCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEeCCEEEEEeehHHHH
Q 017536 119 KHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDIL 196 (369)
Q Consensus 119 ~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d~~~~~Giit~~dll 196 (369)
+. .....+++++|. ++++++++++++.++++.|.+++.+++||+++|+++|++|.+|++
T Consensus 68 ---~~--------------~~~~~~v~~~m~--~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~g~~~Giit~~dil 126 (133)
T 1y5h_A 68 ---GL--------------DPNTATAGELAR--DSIYYVDANASIQEMLNVMEEHQVRRVPVISEHRLVGIVTEADIA 126 (133)
T ss_dssp ---TC--------------CTTTSBHHHHHT--TCCCCEETTCCHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHH
T ss_pred ---CC--------------CccccCHHHHhc--CCCEEECCCCCHHHHHHHHHHcCCCEEEEEECCEEEEEEEHHHHH
Confidence 00 012356788887 578899999999999999999999999999989999999999998
No 93
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.66 E-value=1.1e-15 Score=124.44 Aligned_cols=128 Identities=13% Similarity=0.218 Sum_probs=103.6
Q ss_pred CCccccccccccc--CCeEEeCCCcHHHHHHHHHhCCCeEeeEee-CCeEEEEEehHHHHHHHHHHHHHHHhhhhHHHHH
Q 017536 37 NLEETPVSKVMTR--NPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAA 113 (369)
Q Consensus 37 ~~~~~~v~dim~~--~~i~v~~~~~l~~a~~~m~~~~~~~lpVvd-~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~ 113 (369)
.+...+++++|.+ +++++.+++++.+|++.|.+++++++||+| +|+++|+++..|++......
T Consensus 7 ~l~~~~v~~im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~-------------- 72 (157)
T 2emq_A 7 EFMQMTVKPFLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDTSYKLHGLISMTMMMDAILGL-------------- 72 (157)
T ss_dssp ---CCBSTTTCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEECTTCCEEEEEEHHHHHHHSBCS--------------
T ss_pred hHhhCcHHhhccCCccceEECCCCcHHHHHHHHHHCCceEEEEEcCCCCEEEEeeHHHHHHHHhcc--------------
Confidence 4557899999997 899999999999999999999999999999 79999999999987641100
Q ss_pred HHhHHHhcCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-CCEEEEEeeh
Q 017536 114 VEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTS 192 (369)
Q Consensus 114 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~~~~~Giit~ 192 (369)
.. .. .......+++++|. ++++++++++++.++++.|.++++ +||++ +|+++|+||.
T Consensus 73 ---------~~----~~-----~~~~~~~~v~~~m~--~~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd~~g~~~Giit~ 130 (157)
T 2emq_A 73 ---------ER----IE-----FERLETMKVEEVMN--RNIPRLRLDDSLMKAVGLIVNHPF--VCVENDDGYFAGIFTR 130 (157)
T ss_dssp ---------SS----BC-----GGGGGTCBGGGTCB--CCCCEEETTSBHHHHHHHHHHSSE--EEEECSSSSEEEEEEH
T ss_pred ---------cc----cc-----hHHhcCCcHHHHhC--CCCceecCCCcHHHHHHHHhhCCE--EEEEcCCCeEEEEEEH
Confidence 00 00 00123457899998 578999999999999999999987 99999 7999999999
Q ss_pred HHHHHHHH
Q 017536 193 KDILMRVI 200 (369)
Q Consensus 193 ~dll~~~~ 200 (369)
+|+++.+.
T Consensus 131 ~dil~~~~ 138 (157)
T 2emq_A 131 REVLKQLN 138 (157)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99984443
No 94
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.66 E-value=9.1e-16 Score=124.92 Aligned_cols=126 Identities=19% Similarity=0.208 Sum_probs=104.4
Q ss_pred Ccccccccccc--cCCeEEeCCCcHHHHHHHHHhCCCeEeeEee-CCeEEEEEehHHHHHHHHHHHHHHHhhhhHHHHHH
Q 017536 38 LEETPVSKVMT--RNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAV 114 (369)
Q Consensus 38 ~~~~~v~dim~--~~~i~v~~~~~l~~a~~~m~~~~~~~lpVvd-~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~ 114 (369)
+...+++++|+ ++++++.+++++.+|++.|.+++++++||+| +|+++|+++..|++........
T Consensus 12 l~~~~v~dim~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~~~~~~~------------- 78 (156)
T 3ctu_A 12 FLLGQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEHDL------------- 78 (156)
T ss_dssp HHHTTGGGGEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEECC-CBEEEEEEHHHHHHHHHHHTC-------------
T ss_pred HHHHHHHHHcCcccCceEECCCCCHHHHHHHHHHCCCceEeEECCCCEEEEEEcHHHHHHHHHhccc-------------
Confidence 33568999999 6899999999999999999999999999998 7999999999999876332100
Q ss_pred HhHHHhcCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-CCEEEEEeehH
Q 017536 115 EGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSK 193 (369)
Q Consensus 115 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~~~~~Giit~~ 193 (369)
........+++++|. ++++++++++++.++++.|.+++ ++||++ +|+++|++|.+
T Consensus 79 --------------------~~~~~~~~~v~~~m~--~~~~~v~~~~~l~~a~~~~~~~~--~lpVvd~~g~~~Giit~~ 134 (156)
T 3ctu_A 79 --------------------SQEIMADTDIVHMTK--TDVAVVSPDFTITEVLHKLVDES--FLPVVDAEGIFQGIITRK 134 (156)
T ss_dssp --------------------CHHHHTTSBGGGGCB--CSCCCBCSSCCHHHHHHHTTTSS--EEEEECTTSBEEEEEETT
T ss_pred --------------------cccccccCcHHHhcc--CCceeeCCCCcHHHHHHHHHHcC--eEEEEcCCCeEEEEEEHH
Confidence 011234567999998 57899999999999999999876 699999 89999999999
Q ss_pred HHHHHHH
Q 017536 194 DILMRVI 200 (369)
Q Consensus 194 dll~~~~ 200 (369)
|+++.+.
T Consensus 135 dil~~l~ 141 (156)
T 3ctu_A 135 SILKAVN 141 (156)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9984443
No 95
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.64 E-value=1.1e-15 Score=146.06 Aligned_cols=120 Identities=22% Similarity=0.292 Sum_probs=108.4
Q ss_pred CCCCccccccCCCceeEeCCCCcHHHHHHHHHHc-----CCceEEEEe-CCEEEEEeehHHHHHHHHhcCCCcccccccc
Q 017536 140 FRPSLSTIIPEKSKVVTISPTDTVLMATKKMLEL-----RLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEK 213 (369)
Q Consensus 140 ~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~-----~~~~~~V~d-~~~~~Giit~~dll~~~~~~~~~~~~~~v~~ 213 (369)
...+++++|+ +++++++++.++.++++.|.++ +++++||+| +++++|++|.+|++ .. ..+.++++
T Consensus 153 ~~~~v~~iM~--~~~v~v~~~~tv~ea~~~~~~~~~~~~~~~~ipVvd~~~~lvGiVt~~Dll-~~------~~~~~v~d 223 (473)
T 2zy9_A 153 EEDEAGGLMT--PEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLI-VA------DPRTRVAE 223 (473)
T ss_dssp CTTBSTTTCB--SCEEEECTTCBHHHHHHHHHHHGGGCSEEEEEEEECTTSBEEEEEEHHHHH-HS------CTTSBGGG
T ss_pred CCCCHHHhCC--CCceEeCCCCcHHHHHHHHHhccCCcCceeEEEEECCCCcEEEEEEHHHHh-cC------CCCCcHHH
Confidence 4567899999 5899999999999999999986 478999999 89999999999997 31 12678999
Q ss_pred ccccCCceecCCCCHHHHHHHHHhCCCceeeEEcCCCcEEEEEeHHHHHHHHHHH
Q 017536 214 VMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVAT 268 (369)
Q Consensus 214 ~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~di~~~~~~~ 268 (369)
+|+++++++++++++.++++.|.+++.+.+||||++|+++|+||..|+++.+..+
T Consensus 224 im~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVDe~g~lvGiIT~~Dil~~i~~e 278 (473)
T 2zy9_A 224 IMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLEAE 278 (473)
T ss_dssp TSBSSCCCEESSSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHHH
T ss_pred HhCCCCeEEeCCCcHHHHHHHHHhcCCcEEEEEcCCCEEEEEEehHhhHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999987553
No 96
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.64 E-value=9.8e-16 Score=128.39 Aligned_cols=119 Identities=20% Similarity=0.199 Sum_probs=103.4
Q ss_pred ccccccccccCCeEEeCCCcHHHHHHHHHhCCCeEeeEee-CCeEEEEEehHHHHHHHHHHHHHHHhhhhHHHHHHHhHH
Q 017536 40 ETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVE 118 (369)
Q Consensus 40 ~~~v~dim~~~~i~v~~~~~l~~a~~~m~~~~~~~lpVvd-~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (369)
..+++++|.++++++.+++++.+|+++|.+++++++||+| +|+++|+++..|++......
T Consensus 8 ~~~v~~im~~~~~~v~~~~~l~ea~~~~~~~~~~~~pVvd~~g~~vGivt~~dl~~~~~~~------------------- 68 (184)
T 1pvm_A 8 FMRVEKIMNSNFKTVNWNTTVFDAVKIMNENHLYGLVVKDDNGNDVGLLSERSIIKRFIPR------------------- 68 (184)
T ss_dssp CCBGGGTSBTTCCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHTGGG-------------------
T ss_pred ccCHHHhcCCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhhc-------------------
Confidence 4799999999999999999999999999999999999998 79999999999987642100
Q ss_pred HhcCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-CCEEEEEeehHHHH
Q 017536 119 KHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDIL 196 (369)
Q Consensus 119 ~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~~~~~Giit~~dll 196 (369)
.......+++++|. ++++++++++++.++++.|.+++.+++||++ +|+++|+||..|++
T Consensus 69 -----------------~~~~~~~~v~~im~--~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Givt~~dll 128 (184)
T 1pvm_A 69 -----------------NKKPDEVPIRLVMR--KPIPKVKSDYDVKDVAAYLSENGLERCAVVDDPGRVVGIVTLTDLS 128 (184)
T ss_dssp -----------------CCCGGGSBGGGTSB--SSCCEEETTCBHHHHHHHHHHHTCSEEEEECTTCCEEEEEEHHHHT
T ss_pred -----------------ccCcccCCHHHHhC--CCCcEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHH
Confidence 00012346889998 5789999999999999999999999999999 69999999999997
No 97
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.64 E-value=1.2e-15 Score=123.71 Aligned_cols=123 Identities=23% Similarity=0.302 Sum_probs=101.4
Q ss_pred CCcccccccccccCCeEEeCCCcHHHHHHHHHhCCCeEeeEee-CCeEEEEEehHHHHHHHHHHHHHHHhhhhHHHHHHH
Q 017536 37 NLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVE 115 (369)
Q Consensus 37 ~~~~~~v~dim~~~~i~v~~~~~l~~a~~~m~~~~~~~lpVvd-~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~ 115 (369)
.+...+++++ ++++++.+++++.+|++.|.+++++.+||+| +|+++|+++..|++......
T Consensus 19 ~l~~~~v~~~--~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~vGivt~~dl~~~~~~~---------------- 80 (152)
T 2uv4_A 19 SLEELQIGTY--ANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAEK---------------- 80 (152)
T ss_dssp BHHHHTCSBC--SSCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEEEHHHHHHHHHCS----------------
T ss_pred hHHHccCCcc--CCceEeCCCCcHHHHHHHHHHcCCceEeEECCCCcEEEEEeHHHHHHHhcch----------------
Confidence 3456678887 7889999999999999999999999999998 79999999999987642100
Q ss_pred hHHHhcCCCCCChhhHHHHHHHHhCCCCccccccCC----CceeEeCCCCcHHHHHHHHHHcCCceEEEEe-CCEEEEEe
Q 017536 116 GVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEK----SKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGIL 190 (369)
Q Consensus 116 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~----~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~~~~~Gii 190 (369)
.. .....++.++|.++ .+++++++++++.++++.|.+++.+++||++ +|+++|++
T Consensus 81 ------~~--------------~~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGii 140 (152)
T 2uv4_A 81 ------TY--------------NNLDVSVTKALQHRSHYFEGVLKCYLHETLETIINRLVEAEVHRLVVVDENDVVKGIV 140 (152)
T ss_dssp ------SC--------------CCTTSBGGGGGGTCCHHHHTCSEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEE
T ss_pred ------hh--------------hhhcchHHHHHhhhhcccCCCeEECCCCcHHHHHHHHHHcCCeEEEEECCCCeEEEEE
Confidence 00 01134577888532 4688999999999999999999999999999 79999999
Q ss_pred ehHHHHH
Q 017536 191 TSKDILM 197 (369)
Q Consensus 191 t~~dll~ 197 (369)
|..|+++
T Consensus 141 t~~dil~ 147 (152)
T 2uv4_A 141 SLSDILQ 147 (152)
T ss_dssp EHHHHHH
T ss_pred EHHHHHH
Confidence 9999983
No 98
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.63 E-value=9.7e-17 Score=158.94 Aligned_cols=123 Identities=11% Similarity=0.003 Sum_probs=104.6
Q ss_pred CCCCccccccCCCceeEeCCCCcHHHHHHHHH-HcCCceEEEEe-CCEEEEEeehHHHHHHHHhcCCC------------
Q 017536 140 FRPSLSTIIPEKSKVVTISPTDTVLMATKKML-ELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLP------------ 205 (369)
Q Consensus 140 ~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~-~~~~~~~~V~d-~~~~~Giit~~dll~~~~~~~~~------------ 205 (369)
...+++++|+|++++.++++++++.++.+.|. +++++++||+| +++++|++|.+|++ +.+.....
T Consensus 451 ~~~~V~diM~p~~~v~~v~~~~t~~e~~~~~~~~~~~~~~PVvd~~~~lvGiVt~~DL~-~~l~~~~~~~~~~~~~~~~~ 529 (632)
T 3org_A 451 PEMTAREIMHPIEGEPHLFPDSEPQHIKGILEKFPNRLVFPVIDANGYLLGAISRKEIV-DRLQHVLEDVPEPIAGHRTL 529 (632)
T ss_dssp TTSBHHHHCBCTTTSCCBCSSSCHHHHHHHHHHSTTCCEECBBCTTCBBCCEESHHHHT-TTTTTC--------------
T ss_pred ccCcHHHHhhcCCCceEecCCCcHHHHHHHHHhcCCcceEEEEecCCeEEEEEEHHHHH-HHHHHHhhhcccccccccce
Confidence 34678999998889999999999999999999 79999999999 79999999999997 43322100
Q ss_pred -----------------------------------ccccccccccccCCceecCCCCHHHHHHHHHhCCCceeeEEcCCC
Q 017536 206 -----------------------------------ADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDG 250 (369)
Q Consensus 206 -----------------------------------~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g 250 (369)
....+++++|+++++++++++++.++++.|.+++.+++||+ ++|
T Consensus 530 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iMt~~pitV~~~~~l~ea~~~M~~~~i~~lpVv-e~G 608 (632)
T 3org_A 530 VLLDAADLSENIEGLVDETPSGEHSSKGKRTATVLEPTSSLVVPCDVSPIVVTSYSLVRQLHFLFVMLMPSMIYVT-ERG 608 (632)
T ss_dssp -----------------------------------------CCSCCCCCCEEETTCBHHHHHHHHHHTCCSEEEEE-ETT
T ss_pred eccCHHHHHhhcccCCCCCcccchhhhcccceEeeccccccchhhcCCCceecCCCcHHHHHHHHHhcCCCEEEEE-ECC
Confidence 00113788999999999999999999999999999999999 789
Q ss_pred cEEEEEeHHHHHHH
Q 017536 251 DVVDVVDVIHITHA 264 (369)
Q Consensus 251 ~~~Givt~~di~~~ 264 (369)
+++|+||++|++++
T Consensus 609 ~lvGIVT~~Dll~~ 622 (632)
T 3org_A 609 KLVGIVEREDVAYG 622 (632)
T ss_dssp EEEEEEEGGGTEEC
T ss_pred EEEEEEehhhHHHH
Confidence 99999999999874
No 99
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.63 E-value=7.6e-16 Score=149.72 Aligned_cols=124 Identities=11% Similarity=0.099 Sum_probs=108.8
Q ss_pred CCCccccccCCCceeEeCCC-CcHHHHHHHHHHcCCceEEEEe--CCEEEEEeehHHHHHHHHhcCCCcccccccccccc
Q 017536 141 RPSLSTIIPEKSKVVTISPT-DTVLMATKKMLELRLSSAVVTV--ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTP 217 (369)
Q Consensus 141 ~~~v~~im~~~~~~~~v~~~-~~l~~~~~~m~~~~~~~~~V~d--~~~~~Giit~~dll~~~~~~~~~~~~~~v~~~m~~ 217 (369)
..+++++|+ ++++++.++ +++.++++.|.+++++++||++ +++++|+||.+|+++.+.... .....++.++|++
T Consensus 383 ~~~V~diM~--~~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~~g~lvGiVt~~Dll~~l~~~~-~~~~~~V~~im~~ 459 (527)
T 3pc3_A 383 SLAIAELEL--PAPPVILKSDATVGEAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIVSMN-RQQSDPAIKALNK 459 (527)
T ss_dssp TSBGGGGCC--CCCSCCEETTCBHHHHHHHHHHHTCSEEEEECTTTCCEEEEEEHHHHHHHHHHHC-CCTTSBGGGGEET
T ss_pred CCcHHHhCc--CCCeEEcCCCCcHHHHHHHHHHcCCCeEEEEECCCCEEEEEEEHHHHHHHHHhcc-CcCCCcHHHHhcC
Confidence 567999998 679999999 9999999999999999999998 789999999999985555432 2336799999999
Q ss_pred CCceecCCCCHHHHHHHHHhCCCceeeEEcCC----CcEEEEEeHHHHHHHHHHHh
Q 017536 218 NPECATIDTPIVDALHIMHDGKFLHLPVVDRD----GDVVDVVDVIHITHAAVATV 269 (369)
Q Consensus 218 ~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~----g~~~Givt~~di~~~~~~~~ 269 (369)
+++++++++++.+++++|.++++ +||||++ |+++||||..||++++....
T Consensus 460 ~~~~v~~~~~l~~a~~~m~~~~~--~pVVd~~~~~~g~lvGIVT~~Dll~~l~~~~ 513 (527)
T 3pc3_A 460 RVIRLNESEILGKLARVLEVDPS--VLILGKNPAGKVELKALATKLDVTTFIAAGK 513 (527)
T ss_dssp TCCEEETTSBHHHHHHHHTTCSE--EEEEEECSSSCEEEEEEEEHHHHHHHHHTCC
T ss_pred CCeEECCCCcHHHHHHHHhhCCE--EEEEeCCcccCCeEEEEEEHHHHHHHHHhcc
Confidence 99999999999999999977765 7999984 99999999999999887544
No 100
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.63 E-value=1.2e-15 Score=124.65 Aligned_cols=128 Identities=15% Similarity=0.215 Sum_probs=104.2
Q ss_pred CCccccccccccc--CCeEEeCCCcHHHHHHHHHhCCCeEeeEee-CCeEEEEEehHHHHHHHHHHHHHHHhhhhHHHHH
Q 017536 37 NLEETPVSKVMTR--NPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAA 113 (369)
Q Consensus 37 ~~~~~~v~dim~~--~~i~v~~~~~l~~a~~~m~~~~~~~lpVvd-~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~ 113 (369)
.+...+++++|.+ +++++.+++++.+|++.|.+++++++||+| +|+++|+++..|++......
T Consensus 10 ~l~~~~v~~im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~~-------------- 75 (159)
T 1yav_A 10 QLLEATVGQFMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDPSYRLHGLIGTNMIMNSIFGL-------------- 75 (159)
T ss_dssp -CTTCBHHHHSEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEECTTCBEEEEEEHHHHHHHHBCS--------------
T ss_pred HHhHhhHHHHhCCccceEEECCCCcHHHHHHHHHhCCCcEEEEECCCCCEEEEeEHHHHHHHhhhh--------------
Confidence 4567899999998 899999999999999999999999999998 68999999999987652100
Q ss_pred HHhHHHhcCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-CCEEEEEeeh
Q 017536 114 VEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTS 192 (369)
Q Consensus 114 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~~~~~Giit~ 192 (369)
... . .......+++++|. ++++++++++++.++++.|.++++ +||++ +|+++|+||.
T Consensus 76 ---------~~~-~--------~~~~~~~~v~~~m~--~~~~~v~~~~~l~~a~~~m~~~~~--lpVvd~~g~~vGiit~ 133 (159)
T 1yav_A 76 ---------ERI-E--------FEKLDQITVEEVML--TDIPRLHINDPIMKGFGMVINNGF--VCVENDEQVFEGIFTR 133 (159)
T ss_dssp ---------SSB-C--------GGGTTTSBHHHHSB--CSCCEEETTSBHHHHHHHTTTCSE--EEEECTTCBEEEEEEH
T ss_pred ---------ccc-c--------hhhhccCCHHHhcC--CCCceEcCCCCHHHHHHHHHhCCE--EEEEeCCCeEEEEEEH
Confidence 000 0 00123456888998 578999999999999999998876 99999 8999999999
Q ss_pred HHHHHHHH
Q 017536 193 KDILMRVI 200 (369)
Q Consensus 193 ~dll~~~~ 200 (369)
+|+++.+.
T Consensus 134 ~dil~~~~ 141 (159)
T 1yav_A 134 RVVLKELN 141 (159)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99984433
No 101
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.61 E-value=2e-15 Score=135.34 Aligned_cols=121 Identities=14% Similarity=0.234 Sum_probs=106.3
Q ss_pred ccCCCcccccccccccCCeEEeCCCcHHHHHHHHHhC-----CCeEeeEee-CCeEEEEEehHHHHHHHHHHHHHHHhhh
Q 017536 34 RELNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQG-----KFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKG 107 (369)
Q Consensus 34 ~~~~~~~~~v~dim~~~~i~v~~~~~l~~a~~~m~~~-----~~~~lpVvd-~~~~vGiv~~~dil~~~~~~~~~~~~~~ 107 (369)
........+++++|+++++++++++++.+|++.|.++ +++++||+| +|+++|+++..|++..
T Consensus 130 ~ll~~~~~~v~~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVvd~~~~lvGivt~~dll~~------------ 197 (286)
T 2oux_A 130 ELLHYEDETAGAIMTTEFVSIVANQTVRSAMYVLKNQADMAETIYYVYVVDQENHLVGVISLRDLIVN------------ 197 (286)
T ss_dssp HHTTSCTTBHHHHCBSCCCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEECTTCBEEEEEEHHHHTTS------------
T ss_pred HHhcCChHHHHHhCCCCceEECCCCcHHHHHHHHHHcccCccceeEEEEEcCCCeEEEEEEHHHHHcC------------
Confidence 3346678899999999999999999999999999987 788999999 7999999999998642
Q ss_pred hHHHHHHHhHHHhcCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-CCEE
Q 017536 108 KAIAAAVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKP 186 (369)
Q Consensus 108 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~~~~ 186 (369)
....+++++|. ++++++++++++.++++.|.+++.+++||++ +|++
T Consensus 198 -------------------------------~~~~~v~~im~--~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~l 244 (286)
T 2oux_A 198 -------------------------------DDDTLIADILN--ERVISVHVGDDQEDVAQTIRDYDFLAVPVTDYDDHL 244 (286)
T ss_dssp -------------------------------CTTSBHHHHSB--SCCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBE
T ss_pred -------------------------------CCCCcHHHHcC--CCCeeecCCCCHHHHHHHHHHcCCcEEEEEcCCCeE
Confidence 12346888897 5789999999999999999999999999999 8999
Q ss_pred EEEeehHHHHHHH
Q 017536 187 RGILTSKDILMRV 199 (369)
Q Consensus 187 ~Giit~~dll~~~ 199 (369)
+|+||..|++..+
T Consensus 245 vGiIT~~Dil~~i 257 (286)
T 2oux_A 245 LGIVTVDDIIDVI 257 (286)
T ss_dssp EEEEEHHHHHHHH
T ss_pred EEEEEHHHHHHHH
Confidence 9999999998433
No 102
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.60 E-value=2.9e-15 Score=144.06 Aligned_cols=116 Identities=25% Similarity=0.300 Sum_probs=104.3
Q ss_pred ccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe---CCEEEEEeehHHHHHHHHhcCCCcccccccccccc-CC
Q 017536 144 LSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV---ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTP-NP 219 (369)
Q Consensus 144 v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d---~~~~~Giit~~dll~~~~~~~~~~~~~~v~~~m~~-~~ 219 (369)
.++.|. .+++++++++++.+++++|.+++++++||++ +++++|+||.+|+. . ......++.++|++ ++
T Consensus 115 ~~~~m~--~d~v~l~~~~tv~ea~~~m~~~~~s~~pVvd~g~~~~lvGiVt~rDl~-~-----~~~~~~~V~~vM~~~~~ 186 (511)
T 3usb_A 115 SESGVI--SDPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMR-F-----IQDYSIKISDVMTKEQL 186 (511)
T ss_dssp SSSCSS--SSCCCBCTTSBHHHHHHHHHHHCCSEEEEESCTTTCBEEEEEEHHHHT-T-----CCCSSSBHHHHCCCCCC
T ss_pred cccccc--cCCEEECCCCCHHHHHHHHHHcCCcEEEEEecCCCCEEEEEEEehHhh-h-----hccCCCcHHHhcccCCC
Confidence 456676 5789999999999999999999999999998 57999999999995 2 12236789999997 99
Q ss_pred ceecCCCCHHHHHHHHHhCCCceeeEEcCCCcEEEEEeHHHHHHHHHH
Q 017536 220 ECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVA 267 (369)
Q Consensus 220 ~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~di~~~~~~ 267 (369)
+++++++++.+++++|.+++.+.+||||++|+++|+||.+|+++++..
T Consensus 187 vtv~~~~~l~eal~~m~~~~i~~lpVVDe~g~l~GiIT~~Dil~~~~~ 234 (511)
T 3usb_A 187 ITAPVGTTLSEAEKILQKYKIEKLPLVDNNGVLQGLITIKDIEKVIEF 234 (511)
T ss_dssp CCEETTCCHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHC
T ss_pred EEECCCCCHHHHHHHHHHcCCCEEEEEeCCCCEeeeccHHHHHHhhhc
Confidence 999999999999999999999999999999999999999999998753
No 103
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.60 E-value=5.3e-15 Score=132.19 Aligned_cols=116 Identities=21% Similarity=0.240 Sum_probs=103.9
Q ss_pred CCcccccccccccCCeEEeCCCcHHHHHHHHHhC-----CCeEeeEee-CCeEEEEEehHHHHHHHHHHHHHHHhhhhHH
Q 017536 37 NLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQG-----KFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAI 110 (369)
Q Consensus 37 ~~~~~~v~dim~~~~i~v~~~~~l~~a~~~m~~~-----~~~~lpVvd-~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~ 110 (369)
.....+++++|+++++++.+++++.+|++.|.++ ++.++||+| +|+++|+++.+|++..
T Consensus 131 ~~~~~~v~~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~~--------------- 195 (278)
T 2yvy_A 131 RYEEDEAGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVA--------------- 195 (278)
T ss_dssp HSCTTBGGGTCBSCCCEECTTSBHHHHHHHHHHHTTTCSCSSEEEEECTTCBEEEEEEHHHHHHS---------------
T ss_pred CCCcchHHhhcCCCceEECCCCcHHHHHHHHHHccCCccceeEEEEECCCCCEEEEEEHHHHhcC---------------
Confidence 4556799999999999999999999999999986 789999998 7999999999998742
Q ss_pred HHHHHhHHHhcCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-CCEEEEE
Q 017536 111 AAAVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGI 189 (369)
Q Consensus 111 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~~~~~Gi 189 (369)
....+++++|. ++++++++++++.++++.|.+++.+.+||++ +|+++|+
T Consensus 196 ----------------------------~~~~~v~~im~--~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGi 245 (278)
T 2yvy_A 196 ----------------------------DPRTRVAEIMN--PKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGI 245 (278)
T ss_dssp ----------------------------CTTCBSTTTSB--SSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSBEEEE
T ss_pred ----------------------------CCCCcHHHHhC--CCCeEEeCCCCHHHHHHHHHhcCCCEEEEEeCCCeEEEE
Confidence 12356899997 5789999999999999999999999999999 8999999
Q ss_pred eehHHHHH
Q 017536 190 LTSKDILM 197 (369)
Q Consensus 190 it~~dll~ 197 (369)
||..|++.
T Consensus 246 vT~~Dil~ 253 (278)
T 2yvy_A 246 VTVDDVLD 253 (278)
T ss_dssp EEHHHHHH
T ss_pred EEHHHHHH
Confidence 99999983
No 104
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.58 E-value=6e-17 Score=151.52 Aligned_cols=135 Identities=19% Similarity=0.214 Sum_probs=10.2
Q ss_pred CCCCCChh-hHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe----CCEEEEEeehHHHH
Q 017536 122 GTSISGPN-TFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV----ENKPRGILTSKDIL 196 (369)
Q Consensus 122 g~~~~~~~-~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d----~~~~~Giit~~dll 196 (369)
|.++++.+ ...++..+...-++....|. .+++++.|+.++.+++++|.+++++.+||++ +++++||+|.+|+
T Consensus 117 GiGvIH~n~sie~Qa~~V~~VKr~e~g~i--~dPvtl~P~~Tv~da~~l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~- 193 (556)
T 4af0_A 117 GLGIIHHNCSAEEQAAMVRRVKKYENGFI--TDPLCLGPDATVGDVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDV- 193 (556)
T ss_dssp CEEEECCSSCHHHHHHHHHHHHHCCC------------------------------------------------------
T ss_pred CeEEEcCCCCHHHHHHHHHHHHhcccCcc--CCCeEcCCCCCHHHHHHHHHHhCCCccccccccCcCCEEEEEEecccc-
Confidence 67777665 23333332211112234444 5799999999999999999999999999998 4689999999998
Q ss_pred HHHHhcCCCccccccccccccCCceecCCCCHHHHHHHHHhCCCceeeEEcCCCcEEEEEeHHHHHHHH
Q 017536 197 MRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAA 265 (369)
Q Consensus 197 ~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~di~~~~ 265 (369)
++. + ...+++++|++++++++++.++.+|.++|.++++..+||||++|+++|+||++|+++..
T Consensus 194 -rf~----d-~~~~V~evMT~~lvt~~~~~~leeA~~iL~~~kieklpVVd~~g~LvGlIT~kDi~k~~ 256 (556)
T 4af0_A 194 -QFQ----D-AETPIKSVMTTEVVTGSSPITLEKANSLLRETKKGKLPIVDSNGHLVSLVARSDLLKNQ 256 (556)
T ss_dssp ---------------------------------------------------------------------
T ss_pred -ccc----c-cceEhhhhcccceEEecCCCCHHHHHHHHHHccccceeEEccCCcEEEEEEechhhhhh
Confidence 332 1 26799999999999999999999999999999999999999999999999999999844
No 105
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.56 E-value=7.7e-16 Score=147.56 Aligned_cols=115 Identities=17% Similarity=0.176 Sum_probs=90.7
Q ss_pred CccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-CCEEEEEeehHHHHHHHHhcCCCccccccccccc-c-CC
Q 017536 143 SLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEKVMT-P-NP 219 (369)
Q Consensus 143 ~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~~~~~Giit~~dll~~~~~~~~~~~~~~v~~~m~-~-~~ 219 (369)
+++++|. .+++++++++++.+++++|.+++++++||++ +++++|+||.+|+. . ......++.++|+ + ++
T Consensus 90 ~~~~~m~--~d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd~~~~lvGiVt~rDL~-~-----~~~~~~~v~diM~p~~~~ 161 (496)
T 4fxs_A 90 IFEAGVV--THPVTVRPEQTIADVMELTHYHGFAGFPVVTENNELVGIITGRDVR-F-----VTDLTKSVAAVMTPKERL 161 (496)
T ss_dssp HCCC--C--BCCCCBCSSSBHHHHHHHHTSSCCCEEEEECSSSBEEEEEEHHHHT-T-----CCCTTSBGGGTSEEGGGC
T ss_pred ccccccc--cCceEECCCCCHHHHHHHHHHcCCcEEEEEccCCEEEEEEEHHHHh-h-----cccCCCcHHHHhcCCCCC
Confidence 4577888 6899999999999999999999999999999 89999999999994 1 1223678999998 4 68
Q ss_pred ceecCCCCHHHHHHHHHhCCCceeeEEcCCCcEEEEEeHHHHHHHH
Q 017536 220 ECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAA 265 (369)
Q Consensus 220 ~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~di~~~~ 265 (369)
+++++++++.+++++|.+++++.+||||++|+++|+||++||+++.
T Consensus 162 vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~G~l~GiIT~~DIl~~~ 207 (496)
T 4fxs_A 162 ATVKEGATGAEVQEKMHKARVEKILVVNDEFQLKGMITAKDFHKAE 207 (496)
T ss_dssp CEEECC----CGGGTCC---CCCEEEECTTSBCCEEECCC-----C
T ss_pred EEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCEEEeehHhHHHHhh
Confidence 9999999999999999999999999999999999999999999853
No 106
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.52 E-value=6.7e-14 Score=133.85 Aligned_cols=119 Identities=20% Similarity=0.231 Sum_probs=105.5
Q ss_pred CCCcccccccccccCCeEEeCCCcHHHHHHHHHhC-----CCeEeeEee-CCeEEEEEehHHHHHHHHHHHHHHHhhhhH
Q 017536 36 LNLEETPVSKVMTRNPTFVLSDTLAVEALQKMVQG-----KFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKA 109 (369)
Q Consensus 36 ~~~~~~~v~dim~~~~i~v~~~~~l~~a~~~m~~~-----~~~~lpVvd-~~~~vGiv~~~dil~~~~~~~~~~~~~~~~ 109 (369)
....+.+++++|+++++++++++++.+|++.|.++ ++.++||+| +++++|+++.+|++..
T Consensus 150 l~~~~~~v~~iM~~~~v~v~~~~tv~ea~~~~~~~~~~~~~~~~ipVvd~~~~lvGiVt~~Dll~~-------------- 215 (473)
T 2zy9_A 150 ARYEEDEAGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVA-------------- 215 (473)
T ss_dssp HTSCTTBSTTTCBSCEEEECTTCBHHHHHHHHHHHGGGCSEEEEEEEECTTSBEEEEEEHHHHHHS--------------
T ss_pred hcCCCCCHHHhCCCCceEeCCCCcHHHHHHHHHhccCCcCceeEEEEECCCCcEEEEEEHHHHhcC--------------
Confidence 35667899999999999999999999999999986 589999999 6999999999998742
Q ss_pred HHHHHHhHHHhcCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-CCEEEE
Q 017536 110 IAAAVEGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRG 188 (369)
Q Consensus 110 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~~~~~G 188 (369)
....+++++|. ++++++++++++.++++.|.+++...+||+| +|+++|
T Consensus 216 -----------------------------~~~~~v~dim~--~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVDe~g~lvG 264 (473)
T 2zy9_A 216 -----------------------------DPRTRVAEIMN--PKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVG 264 (473)
T ss_dssp -----------------------------CTTSBGGGTSB--SSCCCEESSSBHHHHHHHHHHHTCSEEEEECTTSBEEE
T ss_pred -----------------------------CCCCcHHHHhC--CCCeEEeCCCcHHHHHHHHHhcCCcEEEEEcCCCEEEE
Confidence 12356899997 5799999999999999999999999999999 899999
Q ss_pred EeehHHHHHHH
Q 017536 189 ILTSKDILMRV 199 (369)
Q Consensus 189 iit~~dll~~~ 199 (369)
+||.+|++..+
T Consensus 265 iIT~~Dil~~i 275 (473)
T 2zy9_A 265 IVTVDDVLDVL 275 (473)
T ss_dssp EEEHHHHHHHH
T ss_pred EEehHhhHHHH
Confidence 99999998433
No 107
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.51 E-value=4.6e-14 Score=137.18 Aligned_cols=123 Identities=13% Similarity=0.219 Sum_probs=104.0
Q ss_pred CcccccccccccCCeEEeCC-CcHHHHHHHHHhCCCeEeeEee--CCeEEEEEehHHHHHHHHHHHHHHHhhhhHHHHHH
Q 017536 38 LEETPVSKVMTRNPTFVLSD-TLAVEALQKMVQGKFRHLPVVE--NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAV 114 (369)
Q Consensus 38 ~~~~~v~dim~~~~i~v~~~-~~l~~a~~~m~~~~~~~lpVvd--~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~ 114 (369)
+...+|+++|+++++++.++ +++.+|+++|.+++++++||+| +++++|+|+.+|+++.....
T Consensus 381 l~~~~V~diM~~~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~~g~lvGiVt~~Dll~~l~~~--------------- 445 (527)
T 3pc3_A 381 WWSLAIAELELPAPPVILKSDATVGEAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIVSM--------------- 445 (527)
T ss_dssp TTTSBGGGGCCCCCSCCEETTCBHHHHHHHHHHHTCSEEEEECTTTCCEEEEEEHHHHHHHHHHH---------------
T ss_pred ccCCcHHHhCcCCCeEEcCCCCcHHHHHHHHHHcCCCeEEEEECCCCEEEEEEEHHHHHHHHHhc---------------
Confidence 34578999999999999999 9999999999999999999999 68999999999998763321
Q ss_pred HhHHHhcCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEeC-----CEEEEE
Q 017536 115 EGVEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVE-----NKPRGI 189 (369)
Q Consensus 115 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d~-----~~~~Gi 189 (369)
......+++++|. ++++++++++++.+++++|.++++ +||+++ |+++|+
T Consensus 446 ----------------------~~~~~~~V~~im~--~~~~~v~~~~~l~~a~~~m~~~~~--~pVVd~~~~~~g~lvGI 499 (527)
T 3pc3_A 446 ----------------------NRQQSDPAIKALN--KRVIRLNESEILGKLARVLEVDPS--VLILGKNPAGKVELKAL 499 (527)
T ss_dssp ----------------------CCCTTSBGGGGEE--TTCCEEETTSBHHHHHHHHTTCSE--EEEEEECSSSCEEEEEE
T ss_pred ----------------------cCcCCCcHHHHhc--CCCeEECCCCcHHHHHHHHhhCCE--EEEEeCCcccCCeEEEE
Confidence 0122457899998 679999999999999999976654 799984 899999
Q ss_pred eehHHHHHHHHhc
Q 017536 190 LTSKDILMRVISQ 202 (369)
Q Consensus 190 it~~dll~~~~~~ 202 (369)
||..|++ +.+..
T Consensus 500 VT~~Dll-~~l~~ 511 (527)
T 3pc3_A 500 ATKLDVT-TFIAA 511 (527)
T ss_dssp EEHHHHH-HHHHT
T ss_pred EEHHHHH-HHHHh
Confidence 9999998 54443
No 108
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.51 E-value=8.8e-16 Score=147.05 Aligned_cols=115 Identities=21% Similarity=0.221 Sum_probs=2.7
Q ss_pred CccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEeCCEEEEEeehHHHHHHHHhcCCCccccccccccc-c-CCc
Q 017536 143 SLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMT-P-NPE 220 (369)
Q Consensus 143 ~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d~~~~~Giit~~dll~~~~~~~~~~~~~~v~~~m~-~-~~~ 220 (369)
+++++|. .+++++++++++.+++++|.+++++++||+++++++|+||.+|+. ... ....++.++|+ + +++
T Consensus 89 ~~~~~m~--~~~v~v~~~~tv~ea~~~m~~~~~s~~pVvd~g~lvGIVt~rDl~-~~~-----~~~~~V~~vMtp~~~~v 160 (490)
T 4avf_A 89 KHETAIV--RDPVTVTPSTKIIELLQMAREYGFSGFPVVEQGELVGIVTGRDLR-VKP-----NAGDTVAAIMTPKDKLV 160 (490)
T ss_dssp HCCC----------------------------------------------------------------------------
T ss_pred ccccCcc--cCceEeCCCCcHHHHHHHHHHhCCCEEEEEECCEEEEEEEhHHhh-hcc-----ccCCcHHHHhccCCCCE
Confidence 4678888 678999999999999999999999999999989999999999994 221 12678999998 4 699
Q ss_pred eecCCCCHHHHHHHHHhCCCceeeEEcCCCcEEEEEeHHHHHHHH
Q 017536 221 CATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAA 265 (369)
Q Consensus 221 ~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~di~~~~ 265 (369)
++++++++.+++++|.+++++.+||||++|+++|+||+.|++++.
T Consensus 161 tv~~~~~l~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~ 205 (490)
T 4avf_A 161 TAREGTPLEEMKAKLYENRIEKMLVVDENFYLRGLVTFRDIEKAK 205 (490)
T ss_dssp ---------------------------------------------
T ss_pred EECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHhhhhc
Confidence 999999999999999999999999999999999999999999864
No 109
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.50 E-value=1.4e-13 Score=132.87 Aligned_cols=115 Identities=21% Similarity=0.304 Sum_probs=104.4
Q ss_pred ccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe---CCEEEEEeehHHHHHHHHhcCCCcccccccccccc-CC
Q 017536 144 LSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV---ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTP-NP 219 (369)
Q Consensus 144 v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d---~~~~~Giit~~dll~~~~~~~~~~~~~~v~~~m~~-~~ 219 (369)
++++|. .+++++++++++.++++.|.+++++++||++ +++++|+||.+|++ .. . ....++.++|++ ++
T Consensus 92 ~~~im~--~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~lvGivt~~Dl~-~~--~---~~~~~v~~im~~~~~ 163 (491)
T 1zfj_A 92 SENGVI--IDPFFLTPEHKVSEAEELMQRYRISGVPIVETLANRKLVGIITNRDMR-FI--S---DYNAPISEHMTSEHL 163 (491)
T ss_dssp HTTTTS--SSCCCBCSSSBHHHHHHHHHHTTCSEEEEESCTTTCBEEEEEEHHHHH-HC--S---CSSSBTTTSCCCSCC
T ss_pred HHhcCc--CCCeEECCCCcHHHHHHHHHHcCCCEEEEEEeCCCCEEEEEEEHHHHh-hh--c---cCCCcHHHHcCCCCC
Confidence 467888 5789999999999999999999999999997 68999999999996 32 1 136789999988 89
Q ss_pred ceecCCCCHHHHHHHHHhCCCceeeEEcCCCcEEEEEeHHHHHHHHH
Q 017536 220 ECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266 (369)
Q Consensus 220 ~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~di~~~~~ 266 (369)
+++++++++.++++.|.+++.+.+||||++|+++|+||..||++.+.
T Consensus 164 ~~v~~~~~l~~a~~~m~~~~~~~lpVVd~~g~lvGivt~~Dil~~~~ 210 (491)
T 1zfj_A 164 VTAAVGTDLETAERILHEHRIEKLPLVDNSGRLSGLITIKDIEKVIE 210 (491)
T ss_dssp CCEETTCCHHHHHHHHHHTTCSEEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred EEECCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEEHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999876
No 110
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.50 E-value=9.3e-16 Score=147.70 Aligned_cols=116 Identities=22% Similarity=0.201 Sum_probs=1.3
Q ss_pred cc-ccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-C---CEEEEEeehHHHHHHHHhcCCCccccccccccccC--
Q 017536 146 TI-IPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-E---NKPRGILTSKDILMRVISQNLPADSTLVEKVMTPN-- 218 (369)
Q Consensus 146 ~i-m~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~---~~~~Giit~~dll~~~~~~~~~~~~~~v~~~m~~~-- 218 (369)
++ |. ++++++++++++.++++.|.+++++++||++ + ++++|+||.+|++ .. ......++.++|+++
T Consensus 100 e~gM~--~~~~~v~~~~tv~eal~~m~~~~~s~~pVvd~~~~~g~lvGiVt~~Dl~-~~----~~~~~~~V~diM~~~~~ 172 (503)
T 1me8_A 100 KAGFV--VSDSNVKPDQTFADVLAISQRTTHNTVAVTDDGTPHGVLLGLVTQRDYP-ID----LTQTETKVSDMMTPFSK 172 (503)
T ss_dssp TC------------------------------------------------------------------------------
T ss_pred ccCcc--cCCeEECCCCcHHHHHHHHHHcCceEEEEEECCCcCCeEEEEEEHHHHH-hh----hccccCcHHHHhCCCCC
Confidence 44 87 5799999999999999999999999999999 5 8999999999996 32 112367899999887
Q ss_pred CceecCCCCHHHHHHHHHhCCCceeeEEcCCCcEEEEEeHHHHHHHHHHH
Q 017536 219 PECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVAT 268 (369)
Q Consensus 219 ~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~di~~~~~~~ 268 (369)
++++++++++.+|+++|.+++++.+||||++|+++|+||.+||++++...
T Consensus 173 ~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~~~ 222 (503)
T 1me8_A 173 LVTAHQDTKLSEANKIIWEKKLNALPIIDDDQHLRYIVFRKDYDRSQVCH 222 (503)
T ss_dssp -------------------------------------------------C
T ss_pred CEEEcCCCcHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEecHHHHhhhcc
Confidence 99999999999999999999999999999999999999999999987654
No 111
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.49 E-value=1.6e-13 Score=120.28 Aligned_cols=167 Identities=17% Similarity=0.197 Sum_probs=108.1
Q ss_pred CccCCcCEEEEEcCCCcEEEEEeHHHHHHHHHhccCC---------------------------------------Cccc
Q 017536 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELN---------------------------------------LEET 41 (369)
Q Consensus 1 M~~~~~~~~~V~d~~~~~~Givt~~Di~~~~~~~~~~---------------------------------------~~~~ 41 (369)
|.+++++++||+|++|+++|++|..|+++.+...... ....
T Consensus 33 m~~~~~~~lpVvd~~~~l~Giit~~di~~~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~g~~~i~a~~~~ 112 (245)
T 3l2b_A 33 MRDKNLKSIPVADGNNHLLGMLSTSNITATYMDIWDSNILAKSATSLDNILDTLSAEAQNINEERKVFPGKVVVAAMQAE 112 (245)
T ss_dssp HHHTTCSEEEEECTTCBEEEEEEHHHHHHHHHCCCCTTHHHHTTCCHHHHHHHTTCEEEECCTTCCCCCSCEEECCSCGG
T ss_pred HHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHHhhhhhhhhhccCCHHHHHHHhCCEEEeccCCcceeeeeEEEEeCChH
Confidence 5689999999999889999999999998665432100 0001
Q ss_pred ccccccccCCeEEeCCCcHHHHHHHHHhCCCeEeeEeeCCeEEEEEehHHHHHHHHHHHHHHHhhhhHHHHHHHhHHHhc
Q 017536 42 PVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHW 121 (369)
Q Consensus 42 ~v~dim~~~~i~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (369)
.+.+.+.++.+.+-.+ -.++...+.+++...+++..+..+ ..++... .. ...
T Consensus 113 ~~~~~~~~~~ivIvgd--r~~~~~~~i~~~~~~liit~~~~~-----~~~v~~~-a~--------------------~~~ 164 (245)
T 3l2b_A 113 SLKEFISEGDIAIAGD--RAEIQAELIELKVSLLIVTGGHTP-----SKEIIEL-AK--------------------KNN 164 (245)
T ss_dssp GGGGTCCTTCEEEECS--CHHHHHHHHHTTCSEEEECTTCCC-----CHHHHHH-HH--------------------HHT
T ss_pred HHHhcCCCCCEEEECC--CHHHHHHHHHcCCCEEEECCCCCC-----CHHHHHH-HH--------------------HcC
Confidence 1222233333334333 367777888888888877753221 1111111 00 000
Q ss_pred CCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-CCEEEEEeehHHHH
Q 017536 122 GTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDIL 196 (369)
Q Consensus 122 g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~~~~~Giit~~dll 196 (369)
......+.+............+++++|+| +++.++++++++.++++.|.+++++++||+| +|+++|++|.+|++
T Consensus 165 ~~~i~t~~d~~~~~~~~~~~~~v~~im~~-~~~~~~~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dll 239 (245)
T 3l2b_A 165 ITVITTPHDSFTASRLIVQSLPVDYVMTK-DNLVAVSTDDLVEDVKVTMSETRYSNYPVIDENNKVVGSIARFHLI 239 (245)
T ss_dssp CEEEECSSCHHHHHHHGGGGSBHHHHSBC-TTCCCEETTSBHHHHHHHHHHHCCSEEEEECTTCBEEEEEECC---
T ss_pred CeEEEeCCChHHHHHHHhcCCceeeEecC-CccEEECCCCcHHHHHHHHHhcCCceEEEEcCCCeEEEEEEHHHhh
Confidence 01111222333334444556779999986 6899999999999999999999999999999 89999999999997
No 112
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.49 E-value=1e-13 Score=133.27 Aligned_cols=160 Identities=13% Similarity=0.186 Sum_probs=124.6
Q ss_pred ccccccccCCeEEeCCCcHHHHHHHHHhCCCeEeeEee---CCeEEEEEehHHHHHHHHHHHHHHHhhhhHHHHHHHhHH
Q 017536 42 PVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE---NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVE 118 (369)
Q Consensus 42 ~v~dim~~~~i~v~~~~~l~~a~~~m~~~~~~~lpVvd---~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (369)
+..+.|..+++++++++++.+++++|.+++++++||+| +++++|+|+.+|+...
T Consensus 114 ~~~~~m~~d~v~l~~~~tv~ea~~~m~~~~~s~~pVvd~g~~~~lvGiVt~rDl~~~----------------------- 170 (511)
T 3usb_A 114 RSESGVISDPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMRFI----------------------- 170 (511)
T ss_dssp TSSSCSSSSCCCBCTTSBHHHHHHHHHHHCCSEEEEESCTTTCBEEEEEEHHHHTTC-----------------------
T ss_pred ccccccccCCEEECCCCCHHHHHHHHHHcCCcEEEEEecCCCCEEEEEEEehHhhhh-----------------------
Confidence 34567888999999999999999999999999999998 5799999999998521
Q ss_pred HhcCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-CCEEEEEeehHHHHH
Q 017536 119 KHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILM 197 (369)
Q Consensus 119 ~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~~~~~Giit~~dll~ 197 (369)
.....+++++|++ .+++++++++++.++++.|.+++.+.+||+| +|+++|++|.+|++
T Consensus 171 -------------------~~~~~~V~~vM~~-~~~vtv~~~~~l~eal~~m~~~~i~~lpVVDe~g~l~GiIT~~Dil- 229 (511)
T 3usb_A 171 -------------------QDYSIKISDVMTK-EQLITAPVGTTLSEAEKILQKYKIEKLPLVDNNGVLQGLITIKDIE- 229 (511)
T ss_dssp -------------------CCSSSBHHHHCCC-CCCCCEETTCCHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHH-
T ss_pred -------------------ccCCCcHHHhccc-CCCEEECCCCCHHHHHHHHHHcCCCEEEEEeCCCCEeeeccHHHHH-
Confidence 0124568899984 4899999999999999999999999999999 89999999999998
Q ss_pred HHHhcCCCccccccccccccCCc--eecCCCCHHHHHHHHHhCCCceeeEEcCCC
Q 017536 198 RVISQNLPADSTLVEKVMTPNPE--CATIDTPIVDALHIMHDGKFLHLPVVDRDG 250 (369)
Q Consensus 198 ~~~~~~~~~~~~~v~~~m~~~~~--~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g 250 (369)
+.+... ....+.+.+..+ .+.......+.++.+.+.+...+.|-..++
T Consensus 230 ~~~~~p-----~a~~D~~~rl~V~aavg~~~d~~era~aLveaGvd~I~Id~a~g 279 (511)
T 3usb_A 230 KVIEFP-----NSAKDKQGRLLVGAAVGVTADAMTRIDALVKASVDAIVLDTAHG 279 (511)
T ss_dssp HHHHCT-----TCCBCTTSCBCCEEEECSSTTHHHHHHHHHHTTCSEEEEECSCT
T ss_pred Hhhhcc-----cchhhhccceeeeeeeeeccchHHHHHHHHhhccceEEeccccc
Confidence 444331 123344433333 333344456667778888998877765554
No 113
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.48 E-value=4.1e-15 Score=143.24 Aligned_cols=165 Identities=15% Similarity=0.101 Sum_probs=24.9
Q ss_pred ccccc-cccCCeEEeCCCcHHHHHHHHHhCCCeEeeEee-C---CeEEEEEehHHHHHHHHHHHHHHHhhhhHHHHHHHh
Q 017536 42 PVSKV-MTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-N---GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEG 116 (369)
Q Consensus 42 ~v~di-m~~~~i~v~~~~~l~~a~~~m~~~~~~~lpVvd-~---~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~~ 116 (369)
+..++ |+++++++++++++.+|+++|.+++++++||+| + ++++|+|+.+|++.. .
T Consensus 97 ~~~e~gM~~~~~~v~~~~tv~eal~~m~~~~~s~~pVvd~~~~~g~lvGiVt~~Dl~~~--~------------------ 156 (503)
T 1me8_A 97 KNFKAGFVVSDSNVKPDQTFADVLAISQRTTHNTVAVTDDGTPHGVLLGLVTQRDYPID--L------------------ 156 (503)
T ss_dssp HTTTC---------------------------------------------------------------------------
T ss_pred hhcccCcccCCeEECCCCcHHHHHHHHHHcCceEEEEEECCCcCCeEEEEEEHHHHHhh--h------------------
Confidence 34455 999999999999999999999999999999998 4 799999999998642 0
Q ss_pred HHHhcCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-CCEEEEEeehHHH
Q 017536 117 VEKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDI 195 (369)
Q Consensus 117 ~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~~~~~Giit~~dl 195 (369)
.....+++++|++..+++++++++++.++++.|.+++.+.+||+| +|+++|+||.+|+
T Consensus 157 ---------------------~~~~~~V~diM~~~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Di 215 (503)
T 1me8_A 157 ---------------------TQTETKVSDMMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIIDDDQHLRYIVFRKDY 215 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ---------------------ccccCcHHHHhCCCCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEecHH
Confidence 012345889998544599999999999999999999999999999 8999999999999
Q ss_pred HHHHHhcCCCccccccccccccCCceecCCCCHHHHHHHHHhCCCceeeEEcCCCcE
Q 017536 196 LMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDV 252 (369)
Q Consensus 196 l~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~ 252 (369)
++.+. ..... ..+...++. ...++. ....+.++.|.+.+.+.++|-..+|..
T Consensus 216 l~~~~-~~~~~-~d~~~~l~v--~a~v~~-~~~~e~~~~l~e~gv~~l~Vd~~~g~~ 267 (503)
T 1me8_A 216 DRSQV-CHNEL-VDSQKRYLV--GAGINT-RDFRERVPALVEAGADVLCIDSSDGFS 267 (503)
T ss_dssp -------CCCC-BCTTSCBCC--EEEECS-SSHHHHHHHHHHHTCSEEEECCSCCCS
T ss_pred HHhhh-cccch-hcccccccc--ccccCc-hhHHHHHHHHHhhhccceEEecccCcc
Confidence 84443 22211 112222221 123344 566677888888888876552333433
No 114
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.47 E-value=6.5e-14 Score=138.70 Aligned_cols=156 Identities=13% Similarity=0.102 Sum_probs=102.5
Q ss_pred cccccccccc--cCCeEEeCCCcHHHHHHHHH-hCCCeEeeEee-CCeEEEEEehHHHHHHHHHHHHHHHhhhh--HHHH
Q 017536 39 EETPVSKVMT--RNPTFVLSDTLAVEALQKMV-QGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGK--AIAA 112 (369)
Q Consensus 39 ~~~~v~dim~--~~~i~v~~~~~l~~a~~~m~-~~~~~~lpVvd-~~~~vGiv~~~dil~~~~~~~~~~~~~~~--~~~~ 112 (369)
.+.+|+|+|+ ++++++++++++.++.+.|. +++++++||+| +++++|+++.+|+++.............. ....
T Consensus 451 ~~~~V~diM~p~~~v~~v~~~~t~~e~~~~~~~~~~~~~~PVvd~~~~lvGiVt~~DL~~~l~~~~~~~~~~~~~~~~~~ 530 (632)
T 3org_A 451 PEMTAREIMHPIEGEPHLFPDSEPQHIKGILEKFPNRLVFPVIDANGYLLGAISRKEIVDRLQHVLEDVPEPIAGHRTLV 530 (632)
T ss_dssp TTSBHHHHCBCTTTSCCBCSSSCHHHHHHHHHHSTTCCEECBBCTTCBBCCEESHHHHTTTTTTC---------------
T ss_pred ccCcHHHHhhcCCCceEecCCCcHHHHHHHHHhcCCcceEEEEecCCeEEEEEEHHHHHHHHHHHhhhccccccccccee
Confidence 5689999999 89999999999999999999 89999999999 69999999999998653321110000000 0000
Q ss_pred HHH--hHHHhcCCCCC-Ch----hhHHHHHHHH-hCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEeCC
Q 017536 113 AVE--GVEKHWGTSIS-GP----NTFIETLRER-MFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVEN 184 (369)
Q Consensus 113 ~~~--~~~~~~g~~~~-~~----~~~~~~~~~~-~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d~~ 184 (369)
... ...+....... .+ ....+..... ....+++++|+ ++++++++++++.++++.|.+++.+++||+++|
T Consensus 531 ~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iMt--~~pitV~~~~~l~ea~~~M~~~~i~~lpVve~G 608 (632)
T 3org_A 531 LLDAADLSENIEGLVDETPSGEHSSKGKRTATVLEPTSSLVVPCD--VSPIVVTSYSLVRQLHFLFVMLMPSMIYVTERG 608 (632)
T ss_dssp ----------------------------------------CCSCC--CCCCEEETTCBHHHHHHHHHHTCCSEEEEEETT
T ss_pred ccCHHHHHhhcccCCCCCcccchhhhcccceEeeccccccchhhc--CCCceecCCCcHHHHHHHHHhcCCCEEEEEECC
Confidence 000 00000000000 00 0000000000 11124889999 678999999999999999999999999999999
Q ss_pred EEEEEeehHHHH
Q 017536 185 KPRGILTSKDIL 196 (369)
Q Consensus 185 ~~~Giit~~dll 196 (369)
+++|+||.+|++
T Consensus 609 ~lvGIVT~~Dll 620 (632)
T 3org_A 609 KLVGIVEREDVA 620 (632)
T ss_dssp EEEEEEEGGGTE
T ss_pred EEEEEEehhhHH
Confidence 999999999997
No 115
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=99.47 E-value=2e-13 Score=94.55 Aligned_cols=69 Identities=30% Similarity=0.415 Sum_probs=63.1
Q ss_pred eeEeCCCCcHHHHHHHHHHcCCceEEEEeCCEEEEEeehHHHHHHHHhcCCCccccccccccccCCcee
Q 017536 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECA 222 (369)
Q Consensus 154 ~~~v~~~~~l~~~~~~m~~~~~~~~~V~d~~~~~Giit~~dll~~~~~~~~~~~~~~v~~~m~~~~~~v 222 (369)
+++++|++++.+|+++|.+++++++||+++|+++|++|.+|+++++...+.+..+.+++++|+++++++
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d~~~lvGIvT~~Di~~~~~~~~~~~~~~~V~~iMt~~~iTV 70 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVMEGDEILGVVTERDILDKVVAKGKNPKEVKVEEIMTKNPVKI 70 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEETTEEEEEEEHHHHHHHTTTTTCCGGGCBGGGTCEECTTCC
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEECCEEEEEEEHHHHHHHHHhcCCCcccCCHHHhcCCCCeEC
Confidence 789999999999999999999999999999999999999999877777777666789999999998875
No 116
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.43 E-value=1.3e-14 Score=140.11 Aligned_cols=117 Identities=25% Similarity=0.327 Sum_probs=6.4
Q ss_pred ccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-CCEEEEEeehHHHHHHHHhcCCCcccccccccccc--CCc
Q 017536 144 LSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTP--NPE 220 (369)
Q Consensus 144 v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~~~~~Giit~~dll~~~~~~~~~~~~~~v~~~m~~--~~~ 220 (369)
+.++|. ++++++++++++.++++.|.+++++.+||+| +++++|+||.+|+. +. . ....++.++|++ +++
T Consensus 97 ~~~iM~--~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~lvGivt~~Dl~-~~--~---~~~~~v~~im~~~~~~~ 168 (494)
T 1vrd_A 97 TENGII--YDPITVTPDMTVKEAIDLMAEYKIGGLPVVDEEGRLVGLLTNRDVR-FE--K---NLSKKIKDLMTPREKLI 168 (494)
T ss_dssp C-------------------------------------------------------------------------------
T ss_pred HhhcCc--cCCeEECCCCCHHHHHHHHHHcCceEEEEEcCCCEEEEEEEHHHHH-hh--c---CCCCcHHHHhCCCCCCe
Confidence 577888 5799999999999999999999999999999 78999999999996 32 1 125789999998 999
Q ss_pred eecCCCCHHHHHHHHHhCCCceeeEEcCCCcEEEEEeHHHHHHHHHHH
Q 017536 221 CATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAVAT 268 (369)
Q Consensus 221 ~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~di~~~~~~~ 268 (369)
++++++++.+++++|.+++++.+||||++|+++|+||..|+++++...
T Consensus 169 ~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~~~~ 216 (494)
T 1vrd_A 169 VAPPDISLEKAKEILHQHRIEKLPLVSKDNKLVGLITIKDIMSVIEHP 216 (494)
T ss_dssp ----------------------------------------CHHHHTCT
T ss_pred EECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHhhhccc
Confidence 999999999999999999999999999999999999999999986543
No 117
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.38 E-value=1.5e-13 Score=131.69 Aligned_cols=113 Identities=19% Similarity=0.284 Sum_probs=89.5
Q ss_pred ccccccccCCeEEeCCCcHHHHHHHHHhCCCeEeeEee-CCeEEEEEehHHHHHHHHHHHHHHHhhhhHHHHHHHhHHHh
Q 017536 42 PVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120 (369)
Q Consensus 42 ~v~dim~~~~i~v~~~~~l~~a~~~m~~~~~~~lpVvd-~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (369)
++.++|..+++++++++++.+++++|.+++++++||+| +++++|+|+.+|+...
T Consensus 90 ~~~~~m~~d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd~~~~lvGiVt~rDL~~~------------------------- 144 (496)
T 4fxs_A 90 IFEAGVVTHPVTVRPEQTIADVMELTHYHGFAGFPVVTENNELVGIITGRDVRFV------------------------- 144 (496)
T ss_dssp HCCC--CBCCCCBCSSSBHHHHHHHHTSSCCCEEEEECSSSBEEEEEEHHHHTTC-------------------------
T ss_pred ccccccccCceEECCCCCHHHHHHHHHHcCCcEEEEEccCCEEEEEEEHHHHhhc-------------------------
Confidence 56788999999999999999999999999999999999 7999999999998521
Q ss_pred cCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-CCEEEEEeehHHHH
Q 017536 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDIL 196 (369)
Q Consensus 121 ~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~~~~~Giit~~dll 196 (369)
.....+++++|+|+.++++++++.++.+++++|.+++...+||+| +|+++|+||.+|++
T Consensus 145 -----------------~~~~~~v~diM~p~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~G~l~GiIT~~DIl 204 (496)
T 4fxs_A 145 -----------------TDLTKSVAAVMTPKERLATVKEGATGAEVQEKMHKARVEKILVVNDEFQLKGMITAKDFH 204 (496)
T ss_dssp -----------------CCTTSBGGGTSEEGGGCCEEECC----CGGGTCC---CCCEEEECTTSBCCEEECCC---
T ss_pred -----------------ccCCCcHHHHhcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCEEEeehHhHHH
Confidence 012456899998534699999999999999999999999999999 89999999999998
No 118
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.36 E-value=2.6e-13 Score=129.95 Aligned_cols=115 Identities=24% Similarity=0.296 Sum_probs=3.3
Q ss_pred cccccccccCCeEEeCCCcHHHHHHHHHhCCCeEeeEeeCCeEEEEEehHHHHHHHHHHHHHHHhhhhHHHHHHHhHHHh
Q 017536 41 TPVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120 (369)
Q Consensus 41 ~~v~dim~~~~i~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (369)
.++.++|..+++++++++++.+|+++|.+++++++||+|+++++|+|+.+|+...
T Consensus 88 k~~~~~m~~~~v~v~~~~tv~ea~~~m~~~~~s~~pVvd~g~lvGIVt~rDl~~~------------------------- 142 (490)
T 4avf_A 88 KKHETAIVRDPVTVTPSTKIIELLQMAREYGFSGFPVVEQGELVGIVTGRDLRVK------------------------- 142 (490)
T ss_dssp HHCCC---------------------------------------------------------------------------
T ss_pred cccccCcccCceEeCCCCcHHHHHHHHHHhCCCEEEEEECCEEEEEEEhHHhhhc-------------------------
Confidence 3578899999999999999999999999999999999999999999999998521
Q ss_pred cCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-CCEEEEEeehHHHHH
Q 017536 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILM 197 (369)
Q Consensus 121 ~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~~~~~Giit~~dll~ 197 (369)
.....+++++|+|+.+++++++++++.+++++|.+++.+.+||+| +|+++|+||.+|+++
T Consensus 143 -----------------~~~~~~V~~vMtp~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~ 203 (490)
T 4avf_A 143 -----------------PNAGDTVAAIMTPKDKLVTAREGTPLEEMKAKLYENRIEKMLVVDENFYLRGLVTFRDIEK 203 (490)
T ss_dssp ------------------------------------------------------------------------------
T ss_pred -----------------cccCCcHHHHhccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHhhh
Confidence 012345889998534699999999999999999999999999999 899999999999983
No 119
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=99.36 E-value=6.1e-14 Score=134.73 Aligned_cols=112 Identities=29% Similarity=0.408 Sum_probs=0.9
Q ss_pred ccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEeCCEEEEEeehHHHHHHHHhcCCCccccccccccccCCceec
Q 017536 144 LSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECAT 223 (369)
Q Consensus 144 v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d~~~~~Giit~~dll~~~~~~~~~~~~~~v~~~m~~~~~~v~ 223 (369)
..+.|. .+++++++++++.++++.|.+++++++||+++++++|++|.+|++ . . ...++.++|.+++++++
T Consensus 95 ~~~~m~--~~~~~v~~~~tv~ea~~~~~~~~~~~~pVvd~~~lvGivt~~Dl~-~---~----~~~~v~~im~~~~~~v~ 164 (486)
T 2cu0_A 95 AERLIV--EDVITIAPDETVDFALFLMEKHGIDGLPVVEDEKVVGIITKKDIA-A---R----EGKLVKELMTKEVITVP 164 (486)
T ss_dssp CC------------------------------------------------------------------------------
T ss_pred hhhccc--cCceEECCCCCHHHHHHHHHHcCCcEEEEEECCEEEEEEEHHHhc-c---C----CCCCHHHHccCCCeEEC
Confidence 355676 679999999999999999999999999999889999999999996 3 1 25689999998999999
Q ss_pred CCCCHHHHHHHHHhCCCceeeEEcCCCcEEEEEeHHHHHHHH
Q 017536 224 IDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAA 265 (369)
Q Consensus 224 ~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~di~~~~ 265 (369)
+++++.++++.|.+++.+.+||||++|+++|+||.+||+++.
T Consensus 165 ~~~~l~eal~~m~~~~~~~lpVVde~g~lvGiiT~~Dil~~~ 206 (486)
T 2cu0_A 165 ESIEVEEALKIMIENRIDRLPVVDERGKLVGLITMSDLVARK 206 (486)
T ss_dssp ------------------------------------------
T ss_pred CcCcHHHHHHHHHHcCCCEEEEEecCCeEEEEEEHHHHHHhh
Confidence 999999999999999999999999999999999999999864
No 120
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.33 E-value=5.7e-13 Score=128.54 Aligned_cols=115 Identities=22% Similarity=0.355 Sum_probs=3.8
Q ss_pred ccccccccCCeEEeCCCcHHHHHHHHHhCCCeEeeEee-CCeEEEEEehHHHHHHHHHHHHHHHhhhhHHHHHHHhHHHh
Q 017536 42 PVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE-NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKH 120 (369)
Q Consensus 42 ~v~dim~~~~i~v~~~~~l~~a~~~m~~~~~~~lpVvd-~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (369)
++.++|.++++++++++++.+|+++|.+++++.+||+| +++++|+|+..|+....
T Consensus 96 ~~~~iM~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~lvGivt~~Dl~~~~------------------------ 151 (494)
T 1vrd_A 96 KTENGIIYDPITVTPDMTVKEAIDLMAEYKIGGLPVVDEEGRLVGLLTNRDVRFEK------------------------ 151 (494)
T ss_dssp TC------------------------------------------------------------------------------
T ss_pred hHhhcCccCCeEECCCCCHHHHHHHHHHcCceEEEEEcCCCEEEEEEEHHHHHhhc------------------------
Confidence 46889999999999999999999999999999999998 68999999999986420
Q ss_pred cCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-CCEEEEEeehHHHHHH
Q 017536 121 WGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMR 198 (369)
Q Consensus 121 ~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~~~~~Giit~~dll~~ 198 (369)
....+++++|++..+++++++++++.++++.|.+++.+.+||+| +++++|++|.+|+++.
T Consensus 152 ------------------~~~~~v~~im~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~ 212 (494)
T 1vrd_A 152 ------------------NLSKKIKDLMTPREKLIVAPPDISLEKAKEILHQHRIEKLPLVSKDNKLVGLITIKDIMSV 212 (494)
T ss_dssp ---------------------------------------------------------------------------CHHH
T ss_pred ------------------CCCCcHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHhh
Confidence 01235888998433799999999999999999999999999999 8999999999999843
No 121
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.31 E-value=3.4e-11 Score=116.07 Aligned_cols=116 Identities=19% Similarity=0.287 Sum_probs=101.7
Q ss_pred ccccccccCCeEEeCCCcHHHHHHHHHhCCCeEeeEee---CCeEEEEEehHHHHHHHHHHHHHHHhhhhHHHHHHHhHH
Q 017536 42 PVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVE---NGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVE 118 (369)
Q Consensus 42 ~v~dim~~~~i~v~~~~~l~~a~~~m~~~~~~~lpVvd---~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (369)
++.++|.++++++++++++.++++.|.+++++++||+| +++++|+|+.+|++..
T Consensus 91 ~~~~im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~lvGivt~~Dl~~~----------------------- 147 (491)
T 1zfj_A 91 RSENGVIIDPFFLTPEHKVSEAEELMQRYRISGVPIVETLANRKLVGIITNRDMRFI----------------------- 147 (491)
T ss_dssp HHTTTTSSSCCCBCSSSBHHHHHHHHHHTTCSEEEEESCTTTCBEEEEEEHHHHHHC-----------------------
T ss_pred hHHhcCcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEeCCCCEEEEEEEHHHHhhh-----------------------
Confidence 45789999999999999999999999999999999997 5899999999998642
Q ss_pred HhcCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-CCEEEEEeehHHHHH
Q 017536 119 KHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILM 197 (369)
Q Consensus 119 ~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~~~~~Giit~~dll~ 197 (369)
.....+++++|++ .+++++++++++.++++.|.+++.+.+||+| +++++|++|.+|++
T Consensus 148 -------------------~~~~~~v~~im~~-~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd~~g~lvGivt~~Dil- 206 (491)
T 1zfj_A 148 -------------------SDYNAPISEHMTS-EHLVTAAVGTDLETAERILHEHRIEKLPLVDNSGRLSGLITIKDIE- 206 (491)
T ss_dssp -------------------SCSSSBTTTSCCC-SCCCCEETTCCHHHHHHHHHHTTCSEEEEECTTSBEEEEEEHHHHH-
T ss_pred -------------------ccCCCcHHHHcCC-CCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEEHHHHH-
Confidence 0124568999983 2788999999999999999999999999999 89999999999998
Q ss_pred HHHh
Q 017536 198 RVIS 201 (369)
Q Consensus 198 ~~~~ 201 (369)
+.+.
T Consensus 207 ~~~~ 210 (491)
T 1zfj_A 207 KVIE 210 (491)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 4443
No 122
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.29 E-value=6e-14 Score=135.85 Aligned_cols=117 Identities=24% Similarity=0.303 Sum_probs=70.1
Q ss_pred CccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEeC----CEEEEEeehHHHHHHHHhcCCCcccccccccccc-
Q 017536 143 SLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTVE----NKPRGILTSKDILMRVISQNLPADSTLVEKVMTP- 217 (369)
Q Consensus 143 ~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d~----~~~~Giit~~dll~~~~~~~~~~~~~~v~~~m~~- 217 (369)
++.++|. ++++++++++++.+++++|.+++++.+||+|+ ++++|+||.+|+. .... .....++.++|++
T Consensus 109 ~~~~im~--~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~~lvGiVt~~Dl~-~~~~---~~~~~~v~~vm~~~ 182 (514)
T 1jcn_A 109 NFEQGFI--TDPVVLSPSHTVGDVLEAKMRHGFSGIPITETGTMGSKLVGIVTSRDID-FLAE---KDHTTLLSEVMTPR 182 (514)
T ss_dssp TCCTTSC--SSCCCCCC-----------------CEESCC--------CCEECTTTTC--------------------CC
T ss_pred hhhhccc--cCCEEECCCCCHHHHHHHHHhcCCCEEEEEeCCCcCCEEEEEEEHHHHH-hhhh---ccCCCCHHHHhCCC
Confidence 4778898 57889999999999999999999999999984 7999999999995 3211 1125689999998
Q ss_pred -CCceecCCCCHHHHHHHHHhCCCceeeEEcCCCcEEEEEeHHHHHHHH
Q 017536 218 -NPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAA 265 (369)
Q Consensus 218 -~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~di~~~~ 265 (369)
+++++++++++.+++++|.+++.+.+||||++|+++|+||+.|+++++
T Consensus 183 ~~~~tv~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~ 231 (514)
T 1jcn_A 183 IELVVAPAGVTLKEANEILQRSKKGKLPIVNDCDELVAIIARTDLKKNR 231 (514)
T ss_dssp BCCCCEETTCCSTTTTTHHHHHTCSCCCEESSSSCCC----CCCCSSCC
T ss_pred CCCeEECCCCCHHHHHHHHHHcCCCcccEECCCCeEEEEEEHHHHHHHh
Confidence 899999999999999999999999999999999999999999988743
No 123
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.21 E-value=3.4e-12 Score=119.71 Aligned_cols=108 Identities=14% Similarity=0.203 Sum_probs=0.8
Q ss_pred ccccccCCeEEeCCCcHHHHHHHHHhCCCeEeeEeeC----CeEEEEEehHHHHHHHHHHHHHHHhhhhHHHHHHHhHHH
Q 017536 44 SKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVEN----GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEK 119 (369)
Q Consensus 44 ~dim~~~~i~v~~~~~l~~a~~~m~~~~~~~lpVvd~----~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (369)
...|..+|+++.|+.++.+|+++|.+++++.+||+++ ++++|++|.+|+-..
T Consensus 141 e~g~i~dPvtl~P~~Tv~da~~l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~rf~------------------------ 196 (556)
T 4af0_A 141 ENGFITDPLCLGPDATVGDVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDVQFQ------------------------ 196 (556)
T ss_dssp CC------------------------------------------------------------------------------
T ss_pred ccCccCCCeEcCCCCCHHHHHHHHHHhCCCccccccccCcCCEEEEEEeccccccc------------------------
Confidence 3457778999999999999999999999999999984 689999999996321
Q ss_pred hcCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-CCEEEEEeehHHHH
Q 017536 120 HWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDIL 196 (369)
Q Consensus 120 ~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~~~~~Giit~~dll 196 (369)
-...+++++|+ +++++++.+.++++|.++|.+++...+||+| +++++|+||.+|+.
T Consensus 197 -------------------d~~~~V~evMT--~~lvt~~~~~~leeA~~iL~~~kieklpVVd~~g~LvGlIT~kDi~ 253 (556)
T 4af0_A 197 -------------------DAETPIKSVMT--TEVVTGSSPITLEKANSLLRETKKGKLPIVDSNGHLVSLVARSDLL 253 (556)
T ss_dssp ------------------------------------------------------------------------------
T ss_pred -------------------ccceEhhhhcc--cceEEecCCCCHHHHHHHHHHccccceeEEccCCcEEEEEEechhh
Confidence 11245889999 5799999999999999999999999999999 99999999999997
No 124
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=99.21 E-value=2.3e-12 Score=123.73 Aligned_cols=162 Identities=16% Similarity=0.166 Sum_probs=22.9
Q ss_pred cccccccCCeEEeCCCcHHHHHHHHHhCCCeEeeEeeCCeEEEEEehHHHHHHHHHHHHHHHhhhhHHHHHHHhHHHhcC
Q 017536 43 VSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHWG 122 (369)
Q Consensus 43 v~dim~~~~i~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 122 (369)
..+.|..+++++++++++.++++.|.+++++++||+++++++|+++.+|++..
T Consensus 95 ~~~~m~~~~~~v~~~~tv~ea~~~~~~~~~~~~pVvd~~~lvGivt~~Dl~~~--------------------------- 147 (486)
T 2cu0_A 95 AERLIVEDVITIAPDETVDFALFLMEKHGIDGLPVVEDEKVVGIITKKDIAAR--------------------------- 147 (486)
T ss_dssp CC------------------------------------------------------------------------------
T ss_pred hhhccccCceEECCCCCHHHHHHHHHHcCCcEEEEEECCEEEEEEEHHHhccC---------------------------
Confidence 45689999999999999999999999999999999988999999999997630
Q ss_pred CCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-CCEEEEEeehHHHHHHHHh
Q 017536 123 TSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVIS 201 (369)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~~~~~Giit~~dll~~~~~ 201 (369)
...+++++|. ++++++++++++.++++.|.+++.+.+||+| +++++|++|.+|++ +...
T Consensus 148 -----------------~~~~v~~im~--~~~~~v~~~~~l~eal~~m~~~~~~~lpVVde~g~lvGiiT~~Dil-~~~~ 207 (486)
T 2cu0_A 148 -----------------EGKLVKELMT--KEVITVPESIEVEEALKIMIENRIDRLPVVDERGKLVGLITMSDLV-ARKK 207 (486)
T ss_dssp -------------------------------------------------------------------------------C
T ss_pred -----------------CCCCHHHHcc--CCCeEECCcCcHHHHHHHHHHcCCCEEEEEecCCeEEEEEEHHHHH-Hhhh
Confidence 1224778887 4688999999999999999999999999999 89999999999998 4443
Q ss_pred cCCCccccccccccccCCceecCCCCHHHHHHHHHhCCCceeeEEc-CCCcEEEEEe
Q 017536 202 QNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDGKFLHLPVVD-RDGDVVDVVD 257 (369)
Q Consensus 202 ~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd-~~g~~~Givt 257 (369)
.... .......++.. ..+... . .+.+..+.+.+...+ |+| ..|...++++
T Consensus 208 ~~~~-~~~~~g~~~v~--~~~~~~-~-~~~a~~l~~~gvd~l-vvdta~G~~~~~L~ 258 (486)
T 2cu0_A 208 YKNA-VRDENGELLVA--AAVSPF-D-IKRAIELDKAGVDVI-VVDTAHAHNLKAIK 258 (486)
T ss_dssp CTTC-CBCTTSCBCCE--EEECTT-C-HHHHHHHHHTTCSEE-EEECSCCCCHHHHH
T ss_pred cccc-ccccCCceeec--ceechh-h-HHHHHHHHHhcCCce-EEEecCCcEeehhh
Confidence 2110 00001111111 112233 3 566777888888765 555 3555555443
No 125
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.13 E-value=4.6e-12 Score=122.67 Aligned_cols=115 Identities=11% Similarity=0.189 Sum_probs=68.1
Q ss_pred ccccccccCCeEEeCCCcHHHHHHHHHhCCCeEeeEeeC----CeEEEEEehHHHHHHHHHHHHHHHhhhhHHHHHHHhH
Q 017536 42 PVSKVMTRNPTFVLSDTLAVEALQKMVQGKFRHLPVVEN----GEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGV 117 (369)
Q Consensus 42 ~v~dim~~~~i~v~~~~~l~~a~~~m~~~~~~~lpVvd~----~~~vGiv~~~dil~~~~~~~~~~~~~~~~~~~~~~~~ 117 (369)
++.++|.++++++.+++++.+|+++|.+++++.+||+|+ ++++|+|+.+|+.... .
T Consensus 109 ~~~~im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~~lvGiVt~~Dl~~~~-~------------------- 168 (514)
T 1jcn_A 109 NFEQGFITDPVVLSPSHTVGDVLEAKMRHGFSGIPITETGTMGSKLVGIVTSRDIDFLA-E------------------- 168 (514)
T ss_dssp TCCTTSCSSCCCCCC-----------------CEESCC--------CCEECTTTTC------------------------
T ss_pred hhhhccccCCEEECCCCCHHHHHHHHHhcCCCEEEEEeCCCcCCEEEEEEEHHHHHhhh-h-------------------
Confidence 678999999999999999999999999999999999985 7999999999975420 0
Q ss_pred HHhcCCCCCChhhHHHHHHHHhCCCCccccccCCCceeEeCCCCcHHHHHHHHHHcCCceEEEEe-CCEEEEEeehHHHH
Q 017536 118 EKHWGTSISGPNTFIETLRERMFRPSLSTIIPEKSKVVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDIL 196 (369)
Q Consensus 118 ~~~~g~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~~~~~Giit~~dll 196 (369)
.....+++++|.+..+++++++++++.++++.|.+++...+||+| +|+++|++|.+|++
T Consensus 169 --------------------~~~~~~v~~vm~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll 228 (514)
T 1jcn_A 169 --------------------KDHTTLLSEVMTPRIELVVAPAGVTLKEANEILQRSKKGKLPIVNDCDELVAIIARTDLK 228 (514)
T ss_dssp --------------------------------CCBCCCCEETTCCSTTTTTHHHHHTCSCCCEESSSSCCC----CCCCS
T ss_pred --------------------ccCCCCHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCCcccEECCCCeEEEEEEHHHHH
Confidence 012345888898323799999999999999999999999999999 89999999999997
No 126
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=99.12 E-value=2.3e-11 Score=84.09 Aligned_cols=53 Identities=25% Similarity=0.525 Sum_probs=48.2
Q ss_pred CccCCcCEEEEEcCCCcEEEEEeHHHHHHHHHhccCCCcccccccccccCCeEE
Q 017536 1 MAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPTFV 54 (369)
Q Consensus 1 M~~~~~~~~~V~d~~~~~~Givt~~Di~~~~~~~~~~~~~~~v~dim~~~~i~v 54 (369)
|.+++++++||+| +|+++||+|++||++++..++.++.+.+++++|+++++++
T Consensus 18 M~~~~i~~~~V~d-~~~lvGIvT~~Di~~~~~~~~~~~~~~~V~~iMt~~~iTV 70 (70)
T 3ghd_A 18 LSRNKAGSAVVME-GDEILGVVTERDILDKVVAKGKNPKEVKVEEIMTKNPVKI 70 (70)
T ss_dssp HHHTTCSEEEEEE-TTEEEEEEEHHHHHHHTTTTTCCGGGCBGGGTCEECTTCC
T ss_pred HHHcCCCEEEEEE-CCEEEEEEEHHHHHHHHHhcCCCcccCCHHHhcCCCCeEC
Confidence 6789999999998 6899999999999988888888888899999999998764
No 127
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=99.12 E-value=2.8e-10 Score=78.72 Aligned_cols=69 Identities=30% Similarity=0.415 Sum_probs=58.3
Q ss_pred eeEeCCCCcHHHHHHHHHHcCCceEEEEeCCEEEEEeehHHHHHHHHhcCCCccccccccccccCCcee
Q 017536 154 VVTISPTDTVLMATKKMLELRLSSAVVTVENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECA 222 (369)
Q Consensus 154 ~~~v~~~~~l~~~~~~m~~~~~~~~~V~d~~~~~Giit~~dll~~~~~~~~~~~~~~v~~~m~~~~~~v 222 (369)
+.++++++++.+|++.|.+++++++||+++++++|++|.+|+++.+...+......+++++|+++++++
T Consensus 2 ~~~v~~~~~~~~a~~~m~~~~~~~~pV~d~~~l~Givt~~dl~~~~~~~~~~~~~~~v~~im~~~~~~v 70 (70)
T 3fio_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVMEGDEILGVVTERDILDKVVAKGKNPKEVKVEEIMTKNPVKI 70 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEETTEEEEEEEHHHHHHHTTTTTCCGGGCBGGGTCEECTTCC
T ss_pred CeEECCCCcHHHHHHHHHHcCCCEEEEEECCEEEEEEEHHHHHHHHHHcCCCcccCCHHHhcCCCCeEC
Confidence 678999999999999999999999999999999999999999844444433344678999998887654
No 128
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.59 E-value=8.9e-08 Score=65.83 Aligned_cols=48 Identities=15% Similarity=0.138 Sum_probs=44.1
Q ss_pred CCceecCCCCHHHHHHHHHhCCCceeeEEcCCCcEEEEEeHHHHHHHHH
Q 017536 218 NPECATIDTPIVDALHIMHDGKFLHLPVVDRDGDVVDVVDVIHITHAAV 266 (369)
Q Consensus 218 ~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Givt~~di~~~~~ 266 (369)
++.++++++++.+|++.|.+++++++||+|+ |+++|+||..|+++++.
T Consensus 1 ~~~~v~~~~~~~~a~~~m~~~~~~~~pV~d~-~~l~Givt~~dl~~~~~ 48 (70)
T 3fio_A 1 KAIVVQPKDTVDRVAKILSRNKAGSAVVMEG-DEILGVVTERDILDKVV 48 (70)
T ss_dssp CEEEECTTCBHHHHHHHHHHTTCSEEEEEET-TEEEEEEEHHHHHHHTT
T ss_pred CCeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHH
Confidence 3578999999999999999999999999997 99999999999998553
No 129
>2pli_A Uncharacterized protein; CORC-associated region, MCSG, PSI2, structural genomics, Pro structure initiative; 1.70A {Neisseria meningitidis} SCOP: d.145.1.4
Probab=97.64 E-value=2.3e-05 Score=56.66 Aligned_cols=52 Identities=10% Similarity=0.050 Sum_probs=42.6
Q ss_pred hcCCCCCCCCccccccccccccCCCCccccccCCCCCCCCCCceeEEEEcCC-CceEEeec
Q 017536 292 MALSPNDDEEDNRSEGSLKFASEGADTARYLSYPSPSPGVPSAFAFKVQDNK-GLMHRFTC 351 (369)
Q Consensus 292 ~~~~~~~~~~~T~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~-g~~~~~~~ 351 (369)
+.+..++++++|++|++...++++|+.|+.+.+.++. |+|.+++ +++.+.++
T Consensus 35 l~~~l~~~~~dTlgG~i~~~lg~iP~~Ge~v~~~~~~--------f~V~~~d~~rI~~v~v 87 (91)
T 2pli_A 35 FGTEYSSEEADTIGGLVIQELGHLPVRGEKVLIGGLQ--------FTVARADNRRLHTLMA 87 (91)
T ss_dssp HCCCCCCSSCCBHHHHHHHHHSSCCCTTCEEEETTEE--------EEEEEECSSCEEEEEE
T ss_pred hCCCCCCCCCccHHHHHHHHhCCCCCCCCEEEECCEE--------EEEEEEeCCEEEEEEE
Confidence 3344455679999999999999999999999999999 9999987 55655543
No 130
>3llb_A Uncharacterized protein; protein PA3983, unknown function, structural genomics, PSI2, MCSG, protein structure initiative; 1.80A {Pseudomonas aeruginosa} SCOP: d.145.1.0
Probab=97.61 E-value=1.7e-05 Score=56.30 Aligned_cols=52 Identities=12% Similarity=0.065 Sum_probs=42.7
Q ss_pred hhcCCCCCCCCccccccccccccCCCCccccccCCCCCCCCCCceeEEEEcCCC-ceEEee
Q 017536 291 AMALSPNDDEEDNRSEGSLKFASEGADTARYLSYPSPSPGVPSAFAFKVQDNKG-LMHRFT 350 (369)
Q Consensus 291 ~~~~~~~~~~~~T~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~g-~~~~~~ 350 (369)
.+.+..++++++|++|++...++++|+.|+.+.+.++. |+|.++++ ++.+.+
T Consensus 25 ~l~~~l~~~~~~Tl~G~i~~~lg~iP~~Gd~v~~~~~~--------f~V~~~~~~rI~~v~ 77 (83)
T 3llb_A 25 FFGSEFSDEEFDTVGGLVMSAFGHLPKRNEVVELGEFR--------FRVLNADSRRVHLLR 77 (83)
T ss_dssp HHCCCCCTTTCSBHHHHHHHHHSSCCCTTCEEEETTEE--------EEEEEECSSCEEEEE
T ss_pred HhCCCCCCCCCcCHHHHHHHHhCcCCCCCCEEEECCEE--------EEEEEeeCCEEEEEE
Confidence 33444456679999999999999999999999999999 99999975 555544
No 131
>3lae_A UPF0053 protein HI0107; APC85784.2, conserved protein, haemophilus influenzae RD KW20, structural genomics, PSI-2; HET: MSE; 1.45A {Haemophilus influenzae} SCOP: d.145.1.4 PDB: 2o1r_A*
Probab=97.58 E-value=1.8e-05 Score=55.83 Aligned_cols=51 Identities=6% Similarity=0.032 Sum_probs=41.9
Q ss_pred hhcCCCCCCCCccccccccccccCCCCccccccCCCCCCCCCCceeEEEEcCCC-ceEEe
Q 017536 291 AMALSPNDDEEDNRSEGSLKFASEGADTARYLSYPSPSPGVPSAFAFKVQDNKG-LMHRF 349 (369)
Q Consensus 291 ~~~~~~~~~~~~T~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~g-~~~~~ 349 (369)
.+.+..++++++|++|++...++++|+.|+.+.+.++. |+|.+++| ++.+.
T Consensus 25 ~l~~~l~~~~~~Tl~G~i~~~lg~iP~~Gd~v~~~~~~--------f~V~~~~~~rI~~v 76 (81)
T 3lae_A 25 MFNWELDTEDARTFNGLILEHLEEIPDEGTICEIDGLL--------ITILEVGDNMIKQA 76 (81)
T ss_dssp HHCCCCCCSSCSBHHHHHHHHCSSCCCTTCEEEETTEE--------EEEEEEETTEEEEE
T ss_pred HhCCCCCCCCCccHHHHHHHHhCCCCCCCCEEEECCEE--------EEEEEeeCCEEEEE
Confidence 33444556678999999999999999999999999999 99999865 45443
No 132
>2pls_A CBS domain protein; APC86064.2, CORC/HLYC transporter associated domain, CBS DOM protein, structural genomics, PSI-2 structure initiative; 2.15A {Chlorobium tepidum tls} SCOP: d.145.1.4
Probab=97.51 E-value=3.2e-05 Score=55.25 Aligned_cols=45 Identities=9% Similarity=-0.038 Sum_probs=39.1
Q ss_pred CCCccccccccccccCCCCccccccCCCCCCCCCCceeEEEEcCC-CceEEeec
Q 017536 299 DEEDNRSEGSLKFASEGADTARYLSYPSPSPGVPSAFAFKVQDNK-GLMHRFTC 351 (369)
Q Consensus 299 ~~~~T~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~-g~~~~~~~ 351 (369)
++++|++|++...++++|+.|+.+.+.++. |+|.+++ +++.+..+
T Consensus 37 ~~~~Tl~G~i~~~lg~iP~~Gd~v~~~~~~--------f~V~~~~~~rI~~v~v 82 (86)
T 2pls_A 37 GVYHTLSGMIMWLLGRLPQTGDITFWENWR--------LEVIDMDSKRIDKVLA 82 (86)
T ss_dssp CSCCBHHHHHHHHHTSCCCTTCEEEETTEE--------EEEEEEETTEEEEEEE
T ss_pred CCcccHHHHHHHHhCCCCCCCCEEEECCEE--------EEEEEeeCCEEEEEEE
Confidence 578999999999999999999999999999 9999986 55655443
No 133
>2oai_A Hemolysin; PFAM03471, xylella fastidiosa temecula1, structur genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; HET: MLY; 1.80A {Xylella fastidiosa} SCOP: d.145.1.4 PDB: 2r8d_A*
Probab=97.47 E-value=3.1e-05 Score=56.31 Aligned_cols=45 Identities=4% Similarity=0.118 Sum_probs=39.2
Q ss_pred CCCccccccccccccCCCCccccccCCCCCCCCCCceeEEEEcCC-CceEEeec
Q 017536 299 DEEDNRSEGSLKFASEGADTARYLSYPSPSPGVPSAFAFKVQDNK-GLMHRFTC 351 (369)
Q Consensus 299 ~~~~T~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~-g~~~~~~~ 351 (369)
++|+|++|++...++++|+.|+.+.+.++. |+|.+++ +++.+.++
T Consensus 45 ~~~dTlgG~i~~~lg~iP~~Gd~v~~~~~~--------f~V~~~d~~rI~~V~v 90 (94)
T 2oai_A 45 NNYHTLAGMCISYFGRIPHVGEYFDWAGWR--------IEIVDLDGARIDXLLL 90 (94)
T ss_dssp CCCSBHHHHHHHHHSSCCCTTCEEEETTEE--------EEEEEEETTEEEEEEE
T ss_pred CCCccHHHHHHHHhCCCCCCCCEEEECCEE--------EEEEEEcCCEEEEEEE
Confidence 568999999999999999999999999999 9999986 55655543
No 134
>2r2z_A Hemolysin; APC85144, enterococcus faecalis V583, STRU initiative, midwest center for structural genomics, MCSG; 1.20A {Enterococcus faecalis} SCOP: d.145.1.4
Probab=97.46 E-value=4.8e-05 Score=55.23 Aligned_cols=51 Identities=6% Similarity=-0.012 Sum_probs=41.6
Q ss_pred cCCCCCCCCccccccccccccCCCCccccccC--CCCCCCCCCceeEEEEcCC-CceEEeec
Q 017536 293 ALSPNDDEEDNRSEGSLKFASEGADTARYLSY--PSPSPGVPSAFAFKVQDNK-GLMHRFTC 351 (369)
Q Consensus 293 ~~~~~~~~~~T~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~~v~~~~-g~~~~~~~ 351 (369)
.+..++++++|++|++...++++|+.|+.+.+ .++. |+|.+++ +++.+.++
T Consensus 34 ~~~l~~~~~~TlgG~i~~~lg~iP~~Gd~v~~~~~~~~--------f~V~~~~~~rI~~v~v 87 (93)
T 2r2z_A 34 ETDLHMSDVDTMAGYLITALGTIPDEGEKPSFEVGNIK--------LTAEEMEGTRLLVLRV 87 (93)
T ss_dssp TCCCCCTTCCBHHHHHHHHHSSCCCTTCCCEEEETTEE--------EEEEEEETTEEEEEEE
T ss_pred CCCCCCCCcccHHHHHHHHhCCCCCCCCEEEEecCCEE--------EEEEEeeCCEEEEEEE
Confidence 33445557999999999999999999999987 8889 9999986 55665544
No 135
>2p13_A CBS domain; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; 1.65A {Nitrosomonas europaea} SCOP: d.145.1.4
Probab=97.44 E-value=4e-05 Score=55.25 Aligned_cols=44 Identities=5% Similarity=-0.086 Sum_probs=38.5
Q ss_pred CCCccccccccccccCCCCccccccCCCCCCCCCCceeEEEEcCC-CceEEee
Q 017536 299 DEEDNRSEGSLKFASEGADTARYLSYPSPSPGVPSAFAFKVQDNK-GLMHRFT 350 (369)
Q Consensus 299 ~~~~T~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~-g~~~~~~ 350 (369)
++|+|++|++...++++|+.|+.+.+.++. |+|.+++ +++.+..
T Consensus 41 ~~~~TlgG~i~~~lg~iP~~Gd~v~~~~~~--------f~V~~~d~~rI~~v~ 85 (90)
T 2p13_A 41 ERYSTLGGYLLWQFGYIPAAGEQITVDGLI--------FEIVSVNKHNIGKVR 85 (90)
T ss_dssp CCCCBHHHHHHHHHSSCCCTTCEEEETTEE--------EEECCBCSSSBCEEE
T ss_pred CCCccHHHHHHHHhCCCCCCCCEEEECCEE--------EEEEEEeCCEEEEEE
Confidence 578999999999999999999999999999 9999987 5555443
No 136
>2p4p_A Hypothetical protein HD1797; CORC_HLYC, PFAM: PF03471, structural GE PSI-2, protein structure initiative, midwest center for STR genomics; HET: MLY MSE; 1.80A {Haemophilus ducreyi} SCOP: d.145.1.4
Probab=97.42 E-value=5.1e-05 Score=54.19 Aligned_cols=45 Identities=7% Similarity=0.101 Sum_probs=39.1
Q ss_pred CCCccccccccccccCCCCccccccCCCCCCCCCCceeEEEEcCC-CceEEeec
Q 017536 299 DEEDNRSEGSLKFASEGADTARYLSYPSPSPGVPSAFAFKVQDNK-GLMHRFTC 351 (369)
Q Consensus 299 ~~~~T~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~-g~~~~~~~ 351 (369)
++++|++|++...++++|+.|+.+.+.++. |+|.+++ +++.+..+
T Consensus 35 ~~~~Tl~G~i~~~lg~iP~~Gd~v~~~~~~--------f~V~~~~~~rI~~v~v 80 (86)
T 2p4p_A 35 ENYETIGGFMMYMLRXIPXXTDFVLYDXYX--------FEIIDTENFRIDQLMV 80 (86)
T ss_dssp CSSCBHHHHHHHHHCSCCCTTCEEEETTEE--------EEEEEEETTEEEEEEE
T ss_pred CCCccHHHHHHHHhCCCCCCCcEEEEeeEE--------EEEEEccCCEEEEEEE
Confidence 579999999999999999999999999999 9999986 55655443
No 137
>2o3g_A Putative protein; APC85631.1, neisseria meningitid structural genomics, PSI-2, protein structure initiative; 2.55A {Neisseria meningitidis} SCOP: d.145.1.4
Probab=97.41 E-value=3.4e-05 Score=55.90 Aligned_cols=53 Identities=11% Similarity=0.161 Sum_probs=42.5
Q ss_pred hhcCC-CC-CCCCccccccccccccCCCCccccccCCCCCCCCCCceeEEEEcCC-CceEEeec
Q 017536 291 AMALS-PN-DDEEDNRSEGSLKFASEGADTARYLSYPSPSPGVPSAFAFKVQDNK-GLMHRFTC 351 (369)
Q Consensus 291 ~~~~~-~~-~~~~~T~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~-g~~~~~~~ 351 (369)
.+.+. .+ +++|+|++|++...++++|+.|+.+.+.++. |+|.+++ +++.+..+
T Consensus 33 ~l~~~~l~~~~~~~Tl~G~i~~~lg~iP~~Gd~v~~~~~~--------f~V~~~~~~rI~~V~v 88 (92)
T 2o3g_A 33 QLNLPQQEEDADFHTVAGLIMEELQTIPDVGDFADFHGWR--------FEVVEKEGQRIERVKI 88 (92)
T ss_dssp TTTCCCCCTTCSCSBHHHHHHHHHTSCCCTTCEEEETTEE--------EEEEEEETTEEEEEEE
T ss_pred HhCCCCCCcCCCcccHHHHHHHHhCCCCCCCCEEEECCEE--------EEEEEeeCCEEEEEEE
Confidence 33444 44 4579999999999999999999999999999 9999986 55655443
No 138
>2p3h_A Uncharacterized CBS domain-containing protein; structural genomics, CORC_HLYC, PFAM03471, putative transpor protein; 1.80A {Corynebacterium glutamicum} SCOP: d.145.1.4
Probab=97.37 E-value=4.9e-05 Score=55.76 Aligned_cols=50 Identities=16% Similarity=0.147 Sum_probs=41.6
Q ss_pred cCCCCCCCCccccccccccccCCCCccccccCCCCCCCCCCceeEEEEcCCCc------eEEeec
Q 017536 293 ALSPNDDEEDNRSEGSLKFASEGADTARYLSYPSPSPGVPSAFAFKVQDNKGL------MHRFTC 351 (369)
Q Consensus 293 ~~~~~~~~~~T~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~g~------~~~~~~ 351 (369)
.+..++++++|++|++...++++|+.|+.+.++ +. |+|.+++|+ +.+.++
T Consensus 30 g~~l~~e~~dTlgGli~~~lg~iP~~Gd~v~~~-~~--------f~V~~~d~~~~~r~rI~~V~v 85 (101)
T 2p3h_A 30 GYELPEGDYETISGLLFDHANALLKTGDVIEIP-LD--------FEPEDYLNNTSPTQRILRITV 85 (101)
T ss_dssp TSCCCCSSCCBHHHHHHHHHCSCCCTTCEEEEE-CC--------CCGGGGTTCSSCCCCEEEEEE
T ss_pred CCCCCCCCCccHHHHHHHHhCCCCCCCCEEEEe-EE--------EEEEEEeCCCCcCCEEEEEEE
Confidence 334455679999999999999999999999999 99 999999854 665544
No 139
>2rk5_A Putative hemolysin; structural genomics, PSI-2, MCSG, protein structure initiative, midwest center for structural genomics, membrane; 1.50A {Streptococcus mutans UA159} SCOP: d.145.1.4
Probab=97.32 E-value=5e-05 Score=54.37 Aligned_cols=53 Identities=11% Similarity=0.011 Sum_probs=41.8
Q ss_pred hhcCCCCCCCCccccccccccccCCCCccc--cccCCC----CCCCCCCceeEEEEcCC-CceEEeec
Q 017536 291 AMALSPNDDEEDNRSEGSLKFASEGADTAR--YLSYPS----PSPGVPSAFAFKVQDNK-GLMHRFTC 351 (369)
Q Consensus 291 ~~~~~~~~~~~~T~~~~~~~~~~~~~~~g~--~~~~~~----~~~~~~~~~~~~v~~~~-g~~~~~~~ 351 (369)
.+.+..++++++|++|++...++++|+.|+ .+.+.+ +. |+|.+++ +++.+..+
T Consensus 24 ~l~~~l~~~~~dTl~G~v~~~lg~iP~~Gd~~~v~~~~~~~~~~--------f~V~~~~~~rI~~v~v 83 (87)
T 2rk5_A 24 YFETDLESDNVDTIAGFYLTGVGTIPSQEEKEHFEVESNGKHLE--------LINDKVKDGRVTKLKI 83 (87)
T ss_dssp HHTCCCCCTTCCBHHHHHHHHHCSCCCSSSCCEEEEEETTEEEE--------EEEEEEETTEEEEEEE
T ss_pred HhCCCCCCCCcccHHHHHHHHhCcCCCCCCcEEEEECCceEEEE--------EEEEEEeCCEEEEEEE
Confidence 334444556799999999999999999999 888887 78 9999986 55555443
No 140
>2nqw_A CBS domain protein; PFAM03471, hemolysins, CBS domains, transporter associated D CORC_HLYC, structural genomics, PSI-2; 1.30A {Porphyromonas gingivalis} SCOP: d.145.1.4
Probab=97.29 E-value=0.0001 Score=53.45 Aligned_cols=45 Identities=20% Similarity=0.135 Sum_probs=39.6
Q ss_pred CCCccccccccccccCCCCccccccCCCCCCCCCCceeEEEEcCC-CceEEeec
Q 017536 299 DEEDNRSEGSLKFASEGADTARYLSYPSPSPGVPSAFAFKVQDNK-GLMHRFTC 351 (369)
Q Consensus 299 ~~~~T~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~-g~~~~~~~ 351 (369)
++++|++|++...++++|..|+.+.+.++. |+|.+++ +++.+..+
T Consensus 44 ~~~~TlgG~i~~~lg~iP~~Gd~v~~~~~~--------f~V~~~d~~rI~~V~v 89 (93)
T 2nqw_A 44 DEVDTLSGLFLEIKQELPHVGDTAVYEPFR--------FQVTQMDKRRIIEIKI 89 (93)
T ss_dssp TTCSBHHHHHHHHHCSCCCTTCEEEETTEE--------EEEEEECSSSEEEEEE
T ss_pred CCcccHHHHHHHHhCcCCCCCCEEEECCEE--------EEEEEeeCCEEEEEEE
Confidence 468999999999999999999999999999 9999986 66666554
No 141
>3ded_A Probable hemolysin; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG, membrane; HET: MSE; 2.14A {Chromobacterium violaceum} SCOP: d.145.1.4
Probab=97.16 E-value=0.0001 Score=55.46 Aligned_cols=44 Identities=11% Similarity=0.048 Sum_probs=38.4
Q ss_pred CCCccccccccccccCCCCccccccCCCCCCCCCCceeEEEEcCCC-ceEEee
Q 017536 299 DEEDNRSEGSLKFASEGADTARYLSYPSPSPGVPSAFAFKVQDNKG-LMHRFT 350 (369)
Q Consensus 299 ~~~~T~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~g-~~~~~~ 350 (369)
++|+|++|++...++++|+.|+.+.+.++. |+|.+++| ++.+.+
T Consensus 64 ~~~dTlgGlil~~lg~iP~~Gd~v~~~g~~--------f~V~~~d~~RI~~V~ 108 (113)
T 3ded_A 64 GNIHTLAGVMLYQLGRVPSVTDRFEWNGFS--------FEVVDMDRTRVDKIL 108 (113)
T ss_dssp TCCCBHHHHHHHHHCSSCCTTCEEEETTEE--------EEEEEEETTEEEEEE
T ss_pred CCCccHHHHHHHHhCCCCCCCCEEEECCEE--------EEEEEEeCCeEEEEE
Confidence 568999999999999999999999999999 99999965 454443
No 142
>1tif_A IF3-N, translation initiation factor 3; IF3 N-terminal domain, ribosome binding factor; 1.80A {Geobacillus stearothermophilus} SCOP: d.15.8.1
Probab=63.24 E-value=19 Score=24.36 Aligned_cols=34 Identities=26% Similarity=0.338 Sum_probs=25.4
Q ss_pred CcCEEEEEcCCCcEEEEEeHHHHHHHHHhccCCC
Q 017536 5 RVDALLLTDSNALLCGILTDKDIATRVIARELNL 38 (369)
Q Consensus 5 ~~~~~~V~d~~~~~~Givt~~Di~~~~~~~~~~~ 38 (369)
+.+.+-+++++|..+|+++..+-++..-..+.++
T Consensus 12 r~~eVrli~~~Ge~lGv~~~~eAl~~A~e~~LDL 45 (78)
T 1tif_A 12 RAREVRLIDQNGDQLGIKSKQEALEIAARRNLDL 45 (78)
T ss_dssp CCSEEEEECTTSCEEEEEEHHHHHHHHHHTTCEE
T ss_pred CCCEEEEECCCCcCCCcccHHHHHHHHHHcCCCE
Confidence 4566889999999999999999885444444433
No 143
>1tif_A IF3-N, translation initiation factor 3; IF3 N-terminal domain, ribosome binding factor; 1.80A {Geobacillus stearothermophilus} SCOP: d.15.8.1
Probab=58.48 E-value=15 Score=24.91 Aligned_cols=25 Identities=12% Similarity=0.242 Sum_probs=21.3
Q ss_pred CceeeEEcCCCcEEEEEeHHHHHHH
Q 017536 240 FLHLPVVDRDGDVVDVVDVIHITHA 264 (369)
Q Consensus 240 ~~~l~Vvd~~g~~~Givt~~di~~~ 264 (369)
.+.+-++|++|..+|+++..+-++.
T Consensus 13 ~~eVrli~~~Ge~lGv~~~~eAl~~ 37 (78)
T 1tif_A 13 AREVRLIDQNGDQLGIKSKQEALEI 37 (78)
T ss_dssp CSEEEEECTTSCEEEEEEHHHHHHH
T ss_pred CCEEEEECCCCcCCCcccHHHHHHH
Confidence 4557799999999999999998863
No 144
>1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A*
Probab=27.75 E-value=61 Score=25.11 Aligned_cols=34 Identities=21% Similarity=0.258 Sum_probs=27.8
Q ss_pred HHHHHHHHHHcCCceEEEEeCCEEEEEeehHHHH
Q 017536 163 VLMATKKMLELRLSSAVVTVENKPRGILTSKDIL 196 (369)
Q Consensus 163 l~~~~~~m~~~~~~~~~V~d~~~~~Giit~~dll 196 (369)
+.+.++.+.+.+.+.+.|..+++++|+|...|.+
T Consensus 121 ~~~~~~~la~~G~T~v~VA~d~~l~GvIalaD~i 154 (156)
T 1svj_A 121 VDQKVDQVARQGATPLVVVEGSRVLGVIALKDIV 154 (156)
T ss_dssp HHHHHHHHHHTTCEEEEEEETTEEEEEEEEEECC
T ss_pred HHHHHHHHHhCCCCEEEEEECCEEEEEEEEecCC
Confidence 6677777788888888887799999999988753
No 145
>1p0z_A Sensor kinase CITA; transferase; HET: FLC MO7; 1.60A {Klebsiella pneumoniae} SCOP: d.110.6.1 PDB: 2v9a_A 2j80_A*
Probab=25.96 E-value=48 Score=24.48 Aligned_cols=16 Identities=38% Similarity=0.735 Sum_probs=13.8
Q ss_pred eeEEcCCCcEEEEEeH
Q 017536 243 LPVVDRDGDVVDVVDV 258 (369)
Q Consensus 243 l~Vvd~~g~~~Givt~ 258 (369)
.||.|++|+++|+|+.
T Consensus 106 ~PV~~~~g~viGvv~v 121 (131)
T 1p0z_A 106 SPIQDATGKVIGIVSV 121 (131)
T ss_dssp EEEECTTCCEEEEEEE
T ss_pred EeEECCCCCEEEEEEE
Confidence 5999888999999964
No 146
>3by8_A Sensor protein DCUS; histidine kinase sensor domain, inner membrane, membrane, phosphoprotein, transferase, transmembrane; 1.45A {Escherichia coli} SCOP: d.110.6.1 PDB: 1ojg_A
Probab=25.27 E-value=48 Score=24.92 Aligned_cols=88 Identities=17% Similarity=0.148 Sum_probs=42.6
Q ss_pred CcHHHHHHHHHH-cCCceEEEEe-CCEEEEEeehHHHHHHHHhcCCCccccccccccccCCceecCCCCHHHHHHHHHhC
Q 017536 161 DTVLMATKKMLE-LRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECATIDTPIVDALHIMHDG 238 (369)
Q Consensus 161 ~~l~~~~~~m~~-~~~~~~~V~d-~~~~~Giit~~dll~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~ 238 (369)
..+...++.+.+ .+...+.|+| +|.. ++..+= ..+.. ......+...+....++.....+....+
T Consensus 41 ~~l~~~~~~~~~~~~~~~i~v~d~~G~~---~~~~~~--~~iG~--~~~~~~~~~al~G~~~~~~~~~~~g~~~------ 107 (142)
T 3by8_A 41 SGIQAIAEAVRKRNDLLFIVVTDMQSLR---YSHPEA--QRIGQ--PFKGDDILKALNGEENVAINRGFLAQAL------ 107 (142)
T ss_dssp CSHHHHHHHHHHHTTCSEEEEEETTCBB---SCCSSG--GGTTS--BCCCGGGTGGGGTCCEEEEECSSSSCEE------
T ss_pred HHHHHHHHHHHhhcCCcEEEEECCCCcE---EECCCh--HHCCC--cCCCCCHHHHhCCCeEEEEecCccEEEE------
Confidence 457777776664 5778888888 6643 122110 11111 1111133333433332222211111000
Q ss_pred CCceeeEEcCCCcEEEEEeHHHHH
Q 017536 239 KFLHLPVVDRDGDVVDVVDVIHIT 262 (369)
Q Consensus 239 ~~~~l~Vvd~~g~~~Givt~~di~ 262 (369)
.-..||.|++|+++|+|+..--+
T Consensus 108 -~~~~PV~~~~g~viGvv~vg~~~ 130 (142)
T 3by8_A 108 -RVFTPIYDENHKQIGVVAIGLEL 130 (142)
T ss_dssp -EEEEEEECTTSCEEEEEEEEEEH
T ss_pred -EEEEeEEcCCCCEEEEEEEeEEH
Confidence 11359998789999999754433
No 147
>3r8s_H 50S ribosomal protein L9; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1p85_F 1p86_F 1vs8_H 1vs6_H 2aw4_H 2awb_H 2gya_F 2gyc_F 1vt2_H 2i2v_H 2j28_H 2i2t_H* 2qao_H* 2qba_H* 2qbc_H* 2qbe_H 2qbg_H 2qbi_H* 2qbk_H* 2qov_H ...
Probab=23.38 E-value=73 Score=24.48 Aligned_cols=27 Identities=26% Similarity=0.399 Sum_probs=20.1
Q ss_pred CCCcEEEEEeHHHHHHHHHhccCCCcc
Q 017536 14 SNALLCGILTDKDIATRVIARELNLEE 40 (369)
Q Consensus 14 ~~~~~~Givt~~Di~~~~~~~~~~~~~ 40 (369)
++|++.|-||..||+..+-..+..+++
T Consensus 86 ~~gklfGSVt~~dIa~al~~~g~~idk 112 (149)
T 3r8s_H 86 DEGKLFGSIGTRDIADAVTAAGVEVAK 112 (149)
T ss_dssp TTSEEEEEECHHHHHHHHHTTSCCCCT
T ss_pred CCCceEcccCHHHHHHHHHHcCCceeh
Confidence 578999999999999766544544443
No 148
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=23.38 E-value=1.8e+02 Score=21.10 Aligned_cols=92 Identities=9% Similarity=0.060 Sum_probs=56.6
Q ss_pred eeEeCCCCcHHHHHHHHHHcCCceEEEEe-CCEEEEEeehHHHHHHHHhcCCCccccccccccccCCceec--------C
Q 017536 154 VVTISPTDTVLMATKKMLELRLSSAVVTV-ENKPRGILTSKDILMRVISQNLPADSTLVEKVMTPNPECAT--------I 224 (369)
Q Consensus 154 ~~~v~~~~~l~~~~~~m~~~~~~~~~V~d-~~~~~Giit~~dll~~~~~~~~~~~~~~v~~~m~~~~~~v~--------~ 224 (369)
+...+.-.+...|.+.+.++++.. -++| .... .+..++. .++... ..++.+++++.-.+.. +
T Consensus 7 iY~~~~C~~c~ka~~~L~~~gi~~-~~~di~~~~---~~~~eL~-~~l~~~----g~~~~~l~n~~~~~~k~l~l~~~~~ 77 (120)
T 3fz4_A 7 FYEYPKCSTCRRAKAELDDLAWDY-DAIDIKKNP---PAASLIR-NWLENS----GLELKKFFNTSGQSYRALGLKDKLH 77 (120)
T ss_dssp EEECSSCHHHHHHHHHHHHHTCCE-EEEETTTSC---CCHHHHH-HHHHHS----CCCGGGGBCTTSHHHHHTTHHHHGG
T ss_pred EEeCCCChHHHHHHHHHHHcCCce-EEEEeccCc---hhHHHHH-HHHHHc----CCCHHHHhCCCCcchhhcCcccccc
Confidence 556666677889999999999864 3445 2222 6777774 665532 2346666654322111 2
Q ss_pred CCCHHHHHHHHHhCC--CceeeEEcCCC-cEEE
Q 017536 225 DTPIVDALHIMHDGK--FLHLPVVDRDG-DVVD 254 (369)
Q Consensus 225 ~~~l~~a~~~~~~~~--~~~l~Vvd~~g-~~~G 254 (369)
+.+..+++++|.+++ +++=.|+++++ -++|
T Consensus 78 ~ls~~~~~~lm~~~p~LikRPIv~~~~~~~~vG 110 (120)
T 3fz4_A 78 QLSLDEAANLLASDGMLIKRPLLVKEGKIVQIG 110 (120)
T ss_dssp GCCHHHHHHHHHHCGGGBCSCEEEETTEEEEES
T ss_pred cCCHHHHHHHHHhChheEeccEEEECCEEEEEc
Confidence 568899999999987 44444555443 3455
No 149
>3fan_A Non-structural protein; chymotrypsin-like, N-terminal beta-barrels, C-terminal alpha-beta extra domain; 1.90A {Porcine respiratory and reproductivesyndrome virus} PDB: 3fao_A
Probab=23.26 E-value=39 Score=27.60 Aligned_cols=24 Identities=21% Similarity=0.182 Sum_probs=17.9
Q ss_pred CCceeeEEcCCCcEEEEEeHHHHH
Q 017536 239 KFLHLPVVDRDGDVVDVVDVIHIT 262 (369)
Q Consensus 239 ~~~~l~Vvd~~g~~~Givt~~di~ 262 (369)
+-..-||+|.+|+++||-+..|=.
T Consensus 125 GdSGsPVvn~dG~VIGVHt~s~~~ 148 (213)
T 3fan_A 125 GDSGSPVITEAGELVGVHTGSNKQ 148 (213)
T ss_dssp CSTTCEEEETTSCEEEEEEC----
T ss_pred CCCCCccCCCCCcEEEEEeccCCc
Confidence 556789999999999999877654
No 150
>2w5e_A Putative serine protease; coiled coil, transmembrane, thiol protease, RNA replication, ribosomal frameshifting, catalytic triad, membrane; 2.00A {Human astrovirus 1}
Probab=20.88 E-value=56 Score=25.46 Aligned_cols=23 Identities=22% Similarity=0.248 Sum_probs=18.8
Q ss_pred HhCCCceeeEEcCCCcEEEEEeH
Q 017536 236 HDGKFLHLPVVDRDGDVVDVVDV 258 (369)
Q Consensus 236 ~~~~~~~l~Vvd~~g~~~Givt~ 258 (369)
...+...-|++|.+|+++||.+.
T Consensus 122 i~pGnSGGPl~n~~G~VVGI~~~ 144 (163)
T 2w5e_A 122 TQDGMSGAPVCDKYCRVLAVHQT 144 (163)
T ss_dssp CSSCCTTCEEECTTSCEEEEEEE
T ss_pred eCCCCchhhEEcCCCEEEEEEcc
Confidence 34566778999999999999863
No 151
>3tjo_A Serine protease HTRA1; peptidase, hydrolase; HET: BOG; 2.30A {Homo sapiens} PDB: 3tjn_A 3nwu_A
Probab=20.63 E-value=54 Score=27.12 Aligned_cols=21 Identities=24% Similarity=0.363 Sum_probs=17.5
Q ss_pred CCceeeEEcCCCcEEEEEeHH
Q 017536 239 KFLHLPVVDRDGDVVDVVDVI 259 (369)
Q Consensus 239 ~~~~l~Vvd~~g~~~Givt~~ 259 (369)
+-..-|++|.+|+++||++..
T Consensus 187 G~SGGPLv~~~G~vVGI~s~~ 207 (231)
T 3tjo_A 187 GNAGGPLVNLDGEVIGINTLK 207 (231)
T ss_dssp TTTTSEEECTTSCEEEEEEEE
T ss_pred CCchhHeecCCCeEEEEEeEE
Confidence 556779999899999999753
Done!