BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017537
(369 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|B9FXV5|IF4G_ORYSJ Eukaryotic translation initiation factor 4G OS=Oryza sativa subsp.
japonica GN=Os07g0555200 PE=2 SV=2
Length = 1792
Score = 434 bits (1116), Expect = e-121, Method: Composition-based stats.
Identities = 217/271 (80%), Positives = 241/271 (88%), Gaps = 2/271 (0%)
Query: 75 IGRLNAPNFKKLFEQVKAVNIDNAVTLAGVVSQIFDKALMEPTFCEMYANFFYFLAGELP 134
+ +L NF+KLFE+VK VNIDN TL GV+SQIFDKALMEPTFCEMYANF + LAG LP
Sbjct: 1190 LNKLTPQNFEKLFEKVKEVNIDNVATLTGVISQIFDKALMEPTFCEMYANFCFHLAGALP 1249
Query: 135 DFSEDNEKITFKRLLLNKCQEEFERGEREQEEANKADKEGEIKQTEEEREEKRIKARRRW 194
DFSEDNEKITFKRLLLNKCQEEFERGERE+ EA+K ++EGEIKQT+EEREEKRI+ARRR
Sbjct: 1250 DFSEDNEKITFKRLLLNKCQEEFERGEREEAEADKTEEEGEIKQTKEEREEKRIRARRRM 1309
Query: 195 LGNIRLIGELYKKKMLTERIMHECIKKLLGQYENPDEEDVEALCILMSTIGEMIDHPKAK 254
LGNIRLIGELYKK+MLTERIMHECIKKLLG Y+NPDEE++EALC LMSTIGEMIDH KAK
Sbjct: 1310 LGNIRLIGELYKKRMLTERIMHECIKKLLGNYQNPDEENIEALCKLMSTIGEMIDHAKAK 1369
Query: 255 EHMDAYFDRMEKLSNNMKLSSRVRLMLKDSIELRKNKWQQRRKVEGPKKIEEVHRDAAQE 314
EHMDAYFD M KLS + +LSSRVR ML+DSI+LRKNKWQQRRKVEGPKKI+EVHRDAAQE
Sbjct: 1370 EHMDAYFDIMLKLSTSQQLSSRVRFMLRDSIDLRKNKWQQRRKVEGPKKIDEVHRDAAQE 1429
Query: 315 RQAQASRLARGPSMNSSSRR--APMDFGPRG 343
R AQ+SRLARG + S RR APMD+GPRG
Sbjct: 1430 RHAQSSRLARGSVVGSGPRRGAAPMDYGPRG 1460
>sp|G5CEW6|IF4G_WHEAT Eukaryotic translation initiation factor 4G OS=Triticum aestivum PE=1
SV=1
Length = 1488
Score = 416 bits (1070), Expect = e-115, Method: Composition-based stats.
Identities = 214/271 (78%), Positives = 239/271 (88%), Gaps = 3/271 (1%)
Query: 75 IGRLNAPNFKKLFEQVKAVNIDNAVTLAGVVSQIFDKALMEPTFCEMYANFFYFLAGELP 134
+ +L NF KLFEQVK VNIDN TL GV+SQIFDKALMEPTFCEMYANF LAG LP
Sbjct: 890 LNKLTPQNFDKLFEQVKEVNIDNVSTLTGVISQIFDKALMEPTFCEMYANFCSHLAGALP 949
Query: 135 DFSEDNEKITFKRLLLNKCQEEFERGEREQEEANKADKEGEIKQTEEEREEKRIKARRRW 194
DFSEDNEKITFKRLLLNKCQEEFERGERE+ EA+K ++EGEIKQT+EEREEKR+KARRR
Sbjct: 950 DFSEDNEKITFKRLLLNKCQEEFERGEREEAEADKTEEEGEIKQTKEEREEKRVKARRRM 1009
Query: 195 LGNIRLIGELYKKKMLTERIMHECIKKLLGQYENPDEEDVEALCILMSTIGEMIDHPKAK 254
LGNIRLIGELYKK+MLTERIMHECIKKLLG Y+NPDEE++EALC LMSTIGEMIDHPKAK
Sbjct: 1010 LGNIRLIGELYKKRMLTERIMHECIKKLLGNYQNPDEENIEALCKLMSTIGEMIDHPKAK 1069
Query: 255 EHMDAYFDRMEKLSNNMKLSSRVRLMLKDSIELRKNKWQQRRKVEGPKKIEEVHRDAAQE 314
EHMDAYFDRM LS + +SSRVR +L+DSI+LRKNKWQQRRKV+GPKKI+EVHRDAAQE
Sbjct: 1070 EHMDAYFDRMRNLSTSQLISSRVRFLLRDSIDLRKNKWQQRRKVDGPKKIDEVHRDAAQE 1129
Query: 315 RQAQASRLARGPSMNSSSRR-AP-MDFGPRG 343
R AQ+SR +RGP ++S RR AP MD+G RG
Sbjct: 1130 RHAQSSR-SRGPVVSSLPRRGAPSMDYGSRG 1159
>sp|Q76E23|IF4G_ARATH Eukaryotic translation initiation factor 4G OS=Arabidopsis thaliana
GN=EIF4G PE=1 SV=2
Length = 1727
Score = 380 bits (977), Expect = e-105, Method: Composition-based stats.
Identities = 204/312 (65%), Positives = 249/312 (79%), Gaps = 13/312 (4%)
Query: 33 MIIMRGMTRNIEIHVIRSDNRGKRRLSKRMRNLKWHIECRGDIGRLNAPNFKKLFEQVKA 92
M +M R ++ I + + K+R K + N +L NF+KLFEQVK+
Sbjct: 1073 MQVMHKAERKYQVGTIADEEQAKQRQLKSILN------------KLTPQNFEKLFEQVKS 1120
Query: 93 VNIDNAVTLAGVVSQIFDKALMEPTFCEMYANFFYFLAGELPDFSEDNEKITFKRLLLNK 152
VNIDNAVTL+GV+SQIFDKALMEPTFCEMYA+F + L+G LPDF+E+ EKITFKRLLLNK
Sbjct: 1121 VNIDNAVTLSGVISQIFDKALMEPTFCEMYADFCFHLSGALPDFNENGEKITFKRLLLNK 1180
Query: 153 CQEEFERGEREQEEANKADKEGEIKQTEEEREEKRIKARRRWLGNIRLIGELYKKKMLTE 212
CQEEFERGE+E+EEA++ +EG+++QTEEEREEKR++ RRR LGNIRLIGELYKK+MLTE
Sbjct: 1181 CQEEFERGEKEEEEASRVAEEGQVEQTEEEREEKRLQVRRRMLGNIRLIGELYKKRMLTE 1240
Query: 213 RIMHECIKKLLGQYENPDEEDVEALCILMSTIGEMIDHPKAKEHMDAYFDRMEKLSNNMK 272
+IMH CI+KLLG ++P EE++EALC LMSTIG MIDH KAK MD YF++M+ LS +
Sbjct: 1241 KIMHACIQKLLGYNQDPHEENIEALCKLMSTIGVMIDHNKAKFQMDGYFEKMKMLSCKQE 1300
Query: 273 LSSRVRLMLKDSIELRKNKWQQRRKVEGPKKIEEVHRDAAQERQAQASRLARGPSMNSSS 332
LSSRVR ML ++I+LRKNKWQ+R KVEGPKKIEEVHRDAAQERQ QA+RL+RGPSMNSS
Sbjct: 1301 LSSRVRFMLINAIDLRKNKWQERMKVEGPKKIEEVHRDAAQERQTQANRLSRGPSMNSSG 1360
Query: 333 RRAPMDF-GPRG 343
RR M+F PRG
Sbjct: 1361 RRGHMEFSSPRG 1372
>sp|Q6NZJ6|IF4G1_MOUSE Eukaryotic translation initiation factor 4 gamma 1 OS=Mus musculus
GN=Eif4g1 PE=1 SV=1
Length = 1600
Score = 211 bits (536), Expect = 1e-53, Method: Composition-based stats.
Identities = 118/291 (40%), Positives = 178/291 (61%), Gaps = 17/291 (5%)
Query: 72 RGDIGRLNAPNFKKLFEQVKAVNIDNAVTLAGVVSQIFDKALMEPTFCEMYANFFY-FLA 130
R + +L F++L +QV + ID L GV+ IF+KA+ EP F YAN +A
Sbjct: 769 RSILNKLTPQMFQQLMKQVTQLAIDTEERLKGVIDLIFEKAISEPNFSVAYANMCRCLMA 828
Query: 131 GELPDFSEDNEKITFKRLLLNKCQEEFERG-------EREQEEANKADKEGEIKQTEEER 183
++P + + F++LLLN+CQ+EFE+ E++Q+E ++A E + +EE
Sbjct: 829 LKVPTTEKPTVTVNFRKLLLNRCQKEFEKDKDDDEVFEKKQKEMDEAATAEERGRLKEEL 888
Query: 184 EEKRIKARRRWLGNIRLIGELYKKKMLTERIMHECIKKLLGQYENPDEEDVEALCILMST 243
EE R ARRR LGNI+ IGEL+K KMLTE IMH+C+ KLL +N DEE +E LC L++T
Sbjct: 889 EEARDIARRRSLGNIKFIGELFKLKMLTEAIMHDCVVKLL---KNHDEESLECLCRLLTT 945
Query: 244 IGEMIDHPKAKEHMDAYFDRMEKLSNNMKLSSRVRLMLKDSIELRKNKWQQRRKVEGPKK 303
IG+ +D KAK MD YF++MEK+ K SSR+R ML+D ++LR++ W RR +GPK
Sbjct: 946 IGKDLDFAKAKPRMDQYFNQMEKIIKEKKTSSRIRFMLQDVLDLRQSNWVPRRGDQGPKT 1005
Query: 304 IEEVHRDAAQERQAQASRLARGPSMNSSSRRAPMDFGPRG--LSLGTPIFN 352
I+++H++A E + ++ + + S RR GP G ++ G P+ +
Sbjct: 1006 IDQIHKEAEMEEHREHIKVQQLMAKGSDKRRG----GPPGPPINRGLPLVD 1052
>sp|Q04637|IF4G1_HUMAN Eukaryotic translation initiation factor 4 gamma 1 OS=Homo sapiens
GN=EIF4G1 PE=1 SV=4
Length = 1599
Score = 210 bits (534), Expect = 2e-53, Method: Composition-based stats.
Identities = 119/291 (40%), Positives = 177/291 (60%), Gaps = 17/291 (5%)
Query: 72 RGDIGRLNAPNFKKLFEQVKAVNIDNAVTLAGVVSQIFDKALMEPTFCEMYANFFY-FLA 130
R + +L F++L +QV + ID L GV+ IF+KA+ EP F YAN +A
Sbjct: 765 RSILNKLTPQMFQQLMKQVTQLAIDTEERLKGVIDLIFEKAISEPNFSVAYANMCRCLMA 824
Query: 131 GELPDFSEDNEKITFKRLLLNKCQEEFERG-------EREQEEANKADKEGEIKQTEEER 183
++P + + F++LLLN+CQ+EFE+ E++Q+E ++A E + +EE
Sbjct: 825 LKVPTTEKPTVTVNFRKLLLNRCQKEFEKDKDDDEVFEKKQKEMDEAATAEERGRLKEEL 884
Query: 184 EEKRIKARRRWLGNIRLIGELYKKKMLTERIMHECIKKLLGQYENPDEEDVEALCILMST 243
EE R ARRR LGNI+ IGEL+K KMLTE IMH+C+ KLL +N DEE +E LC L++T
Sbjct: 885 EEARDIARRRSLGNIKFIGELFKLKMLTEAIMHDCVVKLL---KNHDEESLECLCRLLTT 941
Query: 244 IGEMIDHPKAKEHMDAYFDRMEKLSNNMKLSSRVRLMLKDSIELRKNKWQQRRKVEGPKK 303
IG+ +D KAK MD YF++MEK+ K SSR+R ML+D ++LR + W RR +GPK
Sbjct: 942 IGKDLDFEKAKPRMDQYFNQMEKIIKEKKTSSRIRFMLQDVLDLRGSNWVPRRGDQGPKT 1001
Query: 304 IEEVHRDAAQERQAQASRLARGPSMNSSSRRAPMDFGPRG--LSLGTPIFN 352
I+++H++A E + ++ + + S RR GP G +S G P+ +
Sbjct: 1002 IDQIHKEAEMEEHREHIKVQQLMAKGSDKRRG----GPPGPPISRGLPLVD 1048
>sp|Q80XI3|IF4G3_MOUSE Eukaryotic translation initiation factor 4 gamma 3 OS=Mus musculus
GN=Eif4g3 PE=1 SV=2
Length = 1579
Score = 206 bits (523), Expect = 3e-52, Method: Composition-based stats.
Identities = 113/273 (41%), Positives = 166/273 (60%), Gaps = 14/273 (5%)
Query: 72 RGDIGRLNAPNFKKLFEQVKAVNIDNAVTLAGVVSQIFDKALMEPTFCEMYANFFYFLAG 131
R + +L F +L +QV A+ +D L GV+ +F+KA+ EP+F YAN L
Sbjct: 754 RSILNKLTPQMFNQLMKQVSALTVDTEERLKGVIDLVFEKAIDEPSFSVAYANMCRCLVT 813
Query: 132 -ELPDFSEDNEKITFKRLLLNKCQEEFERGEREQEEANKADKEGEIKQTEEER------- 183
++P + + F++LLLN+CQ+EFE+ + + + K KE E EER
Sbjct: 814 LKVPMADKPGNTVNFRKLLLNRCQKEFEKDKADDDVFEKKQKELEAASAPEERTRLHDEL 873
Query: 184 EEKRIKARRRWLGNIRLIGELYKKKMLTERIMHECIKKLLGQYENPDEEDVEALCILMST 243
EE + KARRR +GNI+ IGEL+K KMLTE IMH+C+ KLL +N DEE +E LC L++T
Sbjct: 874 EEAKDKARRRSIGNIKFIGELFKLKMLTEAIMHDCVVKLL---KNHDEESLECLCRLLTT 930
Query: 244 IGEMIDHPKAKEHMDAYFDRMEKLSNNMKLSSRVRLMLKDSIELRKNKWQQRRKVEGPKK 303
IG+ +D KAK MD YF++MEK+ K SSR+R ML+D I+LR W RR +GPK
Sbjct: 931 IGKDLDFEKAKPRMDQYFNQMEKIVKERKTSSRIRFMLQDVIDLRLCNWVSRRADQGPKT 990
Query: 304 IEEVHRDAAQERQAQASRLARGPSMNSSSRRAP 336
IE++H++A E Q + ++ + + + +R P
Sbjct: 991 IEQIHKEAKIEEQEEQRKVQQ---LMTKEKRRP 1020
>sp|O43432|IF4G3_HUMAN Eukaryotic translation initiation factor 4 gamma 3 OS=Homo sapiens
GN=EIF4G3 PE=1 SV=2
Length = 1585
Score = 204 bits (518), Expect = 1e-51, Method: Composition-based stats.
Identities = 112/273 (41%), Positives = 165/273 (60%), Gaps = 14/273 (5%)
Query: 72 RGDIGRLNAPNFKKLFEQVKAVNIDNAVTLAGVVSQIFDKALMEPTFCEMYANFFYFLAG 131
R + +L F +L +QV + +D L GV+ +F+KA+ EP+F YAN L
Sbjct: 759 RSILNKLTPQMFNQLMKQVSGLTVDTEERLKGVIDLVFEKAIDEPSFSVAYANMCRCLVT 818
Query: 132 -ELPDFSEDNEKITFKRLLLNKCQEEFERGEREQEEANKADKEGEIKQTEEER------- 183
++P + + F++LLLN+CQ+EFE+ + + + K KE E EER
Sbjct: 819 LKVPMADKPGNTVNFRKLLLNRCQKEFEKDKADDDVFEKKQKELEAASAPEERTRLHDEL 878
Query: 184 EEKRIKARRRWLGNIRLIGELYKKKMLTERIMHECIKKLLGQYENPDEEDVEALCILMST 243
EE + KARRR +GNI+ IGEL+K KMLTE IMH+C+ KLL +N DEE +E LC L++T
Sbjct: 879 EEAKDKARRRSIGNIKFIGELFKLKMLTEAIMHDCVVKLL---KNHDEESLECLCRLLTT 935
Query: 244 IGEMIDHPKAKEHMDAYFDRMEKLSNNMKLSSRVRLMLKDSIELRKNKWQQRRKVEGPKK 303
IG+ +D KAK MD YF++MEK+ K SSR+R ML+D I+LR W RR +GPK
Sbjct: 936 IGKDLDFEKAKPRMDQYFNQMEKIVKERKTSSRIRFMLQDVIDLRLCNWVSRRADQGPKT 995
Query: 304 IEEVHRDAAQERQAQASRLARGPSMNSSSRRAP 336
IE++H++A E Q + ++ + + + +R P
Sbjct: 996 IEQIHKEAKIEEQEEQRKVQQ---LMTKEKRRP 1025
>sp|Q6K641|IF4G2_ORYSJ Eukaryotic translation initiation factor isoform 4G-2 OS=Oryza
sativa subsp. japonica GN=Os02g0611500 PE=2 SV=1
Length = 780
Score = 190 bits (483), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 109/260 (41%), Positives = 162/260 (62%), Gaps = 13/260 (5%)
Query: 58 LSKRMRNLKWHIECRGDIGRLNAPNFKKLFEQVKAVNIDNAVTLAGVVSQIFDKALMEPT 117
LS + R LK +G + +L F L Q+ I A L V+S IF+KA++EPT
Sbjct: 201 LSNKERVLKT---VKGILNKLTPEKFDLLKGQLIEAGITTADILKDVISLIFEKAVLEPT 257
Query: 118 FCEMYANFFYFLAGELPDFSED---NEKITFKRLLLNKCQEEFERGEREQEEANKADKEG 174
FC MYA + L +LP F + ++ITFKR+LLN CQE FE + + E NK
Sbjct: 258 FCPMYAQLCFDLNEKLPSFPSEEPGGKEITFKRVLLNNCQEAFEGADNLRSEVNKLTG-- 315
Query: 175 EIKQTEEEREEKRIKARRRWLGNIRLIGELYKKKMLTERIMHECIKKLLGQYEN--PDEE 232
+ Q E R+++R+ + R LGNIRL+GEL K+KM+ E+I+H +++LLG N P EE
Sbjct: 316 -LDQEMERRDKERL-VKLRTLGNIRLVGELLKQKMVPEKIVHHIVQELLGSESNRCPAEE 373
Query: 233 DVEALCILMSTIGEMID-HPKAKEHMDAYFDRMEKLSNNMKLSSRVRLMLKDSIELRKNK 291
+VEA+C +TIG+ +D +PK++ D YF+R++ L+ N +L+SR+R M +D ++LR N+
Sbjct: 374 NVEAICQFFNTIGKQLDENPKSRRFNDVYFNRLKDLTTNSQLASRLRFMARDVLDLRSNQ 433
Query: 292 WQQRRKVEGPKKIEEVHRDA 311
W RR+ KKI E+HR+A
Sbjct: 434 WVPRREEMKAKKISEIHREA 453
>sp|Q84PB3|IF4G1_ORYSJ Eukaryotic translation initiation factor isoform 4G-1 OS=Oryza
sativa subsp. japonica GN=Os04g0499300 PE=2 SV=2
Length = 793
Score = 177 bits (448), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 112/277 (40%), Positives = 164/277 (59%), Gaps = 17/277 (6%)
Query: 43 IEIHVIRSDNRGKRRLSKRMRNLKWHIECRGDIGRLNAPNFKKLFEQVKAVNIDNAVTLA 102
I+ V S RG LS++ R LK +G + +L F L Q+ I A L
Sbjct: 188 IKAEVPWSARRGN--LSEKDRVLKT---VKGILNKLTPEKFDLLKGQLMESGITTADILK 242
Query: 103 GVVSQIFDKALMEPTFCEMYANFFYFLAGELPDFSED---NEKITFKRLLLNKCQEEFER 159
V+S IF+KA+ EPTFC MYA L +LP F + ++ITFKR+LLN CQE FE
Sbjct: 243 DVISLIFEKAVFEPTFCPMYAQLCSDLNEKLPSFPSEEPGGKEITFKRVLLNNCQEAFEG 302
Query: 160 GEREQEEANKADKEGEIKQTEEEREEKRIKARRRWLGNIRLIGELYKKKMLTERIMHECI 219
E + E K Q E R+++RI + R LGNIRLIGEL K+KM+ E+I+H +
Sbjct: 303 AESLRAEIAKLTGP---DQEMERRDKERI-VKLRTLGNIRLIGELLKQKMVPEKIVHHIV 358
Query: 220 KKLLGQYEN----PDEEDVEALCILMSTIGEMID-HPKAKEHMDAYFDRMEKLSNNMKLS 274
++LLG + P+EE+VEA+C +TIG+ +D +PK++ D YF +M++L+ N++L+
Sbjct: 359 QELLGSGPDKKACPEEENVEAICQFFNTIGKQLDENPKSRRINDTYFIQMKELTTNLQLA 418
Query: 275 SRVRLMLKDSIELRKNKWQQRRKVEGPKKIEEVHRDA 311
R+R M++D ++LR N W RR+ K I E+H +A
Sbjct: 419 PRLRFMVRDVVDLRSNNWVPRREEIKAKTISEIHDEA 455
>sp|O82233|IF4G2_ARATH Eukaryotic translation initiation factor isoform 4G-2
OS=Arabidopsis thaliana GN=EIF(ISO)4G2 PE=1 SV=1
Length = 747
Score = 170 bits (431), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 107/275 (38%), Positives = 162/275 (58%), Gaps = 15/275 (5%)
Query: 43 IEIHVIRSDNRGKRRLSKRMRNLKWHIECRGDIGRLNAPNFKKLFEQVKAVNIDNAVTLA 102
I+ V S RG LS + R +K +G + +L ++ L Q+ I +A L
Sbjct: 155 IKAEVPWSAKRGA--LSDKDRVVK---SVKGILNKLTPEKYELLKGQLIDAGITSADILK 209
Query: 103 GVVSQIFDKALMEPTFCEMYANFFYFLAGELPDFSED---NEKITFKRLLLNKCQEEFER 159
V+ IF+ A+++PTFCEMYA + + G+LP F + ++ITFKR+LLN CQE FE
Sbjct: 210 EVIQLIFENAILQPTFCEMYALLCFDINGQLPSFPSEEPGGKEITFKRVLLNNCQEAFEG 269
Query: 160 GEREQEEANKADKEGEIKQTEEEREEKRIKARRRWLGNIRLIGELYKKKMLTERIMHECI 219
+ +EE + + E ER +K A+ R LGNIRLIGEL K+KM+ E+I+H +
Sbjct: 270 AGKLKEEIRQMTNPDQ----EMERMDKEKMAKLRTLGNIRLIGELLKQKMVPEKIVHHIV 325
Query: 220 KKLLGQYEN--PDEEDVEALCILMSTIGEMID-HPKAKEHMDAYFDRMEKLSNNMKLSSR 276
++LLG P E DVEALC TIG+ +D P+++ D YF R+++L+ + +L R
Sbjct: 326 QELLGDDTKACPAEGDVEALCQFFITIGKQLDDSPRSRGINDTYFGRLKELARHPQLELR 385
Query: 277 VRLMLKDSIELRKNKWQQRRKVEGPKKIEEVHRDA 311
+R M+++ ++LR NKW RR+ KKI E+H +A
Sbjct: 386 LRFMVQNVVDLRANKWVPRREEVKAKKINEIHSEA 420
>sp|Q03387|IF4G1_WHEAT Eukaryotic translation initiation factor isoform 4G-1 OS=Triticum
aestivum PE=1 SV=2
Length = 788
Score = 167 bits (424), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 113/275 (41%), Positives = 159/275 (57%), Gaps = 15/275 (5%)
Query: 43 IEIHVIRSDNRGKRRLSKRMRNLKWHIECRGDIGRLNAPNFKKLFEQVKAVNIDNAVTLA 102
I+ V S RG LS++ R LK +G + +L F L Q+ I A L
Sbjct: 191 IKADVPWSARRGN--LSEKDRVLKT---VKGILNKLTPEKFDLLKGQLLDSGITTADILK 245
Query: 103 GVVSQIFDKALMEPTFCEMYANFFYFLAGELPDFSED---NEKITFKRLLLNKCQEEFER 159
V+S IF+KA+ EPTFC MYA L LP F + ++ITFKR+LLN CQE FE
Sbjct: 246 DVISLIFEKAVFEPTFCPMYAQLCSELNDNLPTFPSEEPGGKEITFKRVLLNNCQEAFEG 305
Query: 160 GEREQEEANKADKEGEIKQTEEEREEKRIKARRRWLGNIRLIGELYKKKMLTERIMHECI 219
+ + E A G Q E+R+++RI + R LGNIRLIGEL K+KM+ E+I+H +
Sbjct: 306 ADSLRVEI--ASLTGP-DQEMEKRDKERI-FKLRTLGNIRLIGELLKQKMVPEKIVHHIV 361
Query: 220 KKLLGQYEN--PDEEDVEALCILMSTIGEMID-HPKAKEHMDAYFDRMEKLSNNMKLSSR 276
K+LLG + PDEE VEA+C +TIG+ +D +PK++ D YF ++ +L N +L+ R
Sbjct: 362 KELLGSDKKACPDEEHVEAICQFFNTIGKQLDENPKSRRINDTYFVQIRELVANPQLTPR 421
Query: 277 VRLMLKDSIELRKNKWQQRRKVEGPKKIEEVHRDA 311
+ M++D I+LR N W RR K I E+H +A
Sbjct: 422 SKFMVRDLIDLRSNNWVPRRAEIKAKTISEIHTEA 456
>sp|Q41583|IF4G2_WHEAT Eukaryotic translation initiation factor isoform 4G-2 OS=Triticum
aestivum PE=2 SV=1
Length = 787
Score = 166 bits (421), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 121/317 (38%), Positives = 171/317 (53%), Gaps = 26/317 (8%)
Query: 43 IEIHVIRSDNRGKRRLSKRMRNLKWHIECRGDIGRLNAPNFKKLFEQVKAVNIDNAVTLA 102
I+ V S RG LS++ R LK +G + +L F L ++ I A L
Sbjct: 190 IKADVPWSARRGN--LSEKDRVLK---TVKGILNKLTPEKFDLLKGELLDSGITTADILK 244
Query: 103 GVVSQIFDKALMEPTFCEMYANFFYFLAGELPDFSED---NEKITFKRLLLNKCQEEFER 159
V+S IF+KA+ EPTFC MYA L LP F + ++ITFKR+LLN CQE FE
Sbjct: 245 DVISLIFEKAVFEPTFCPMYAQLCSELNDNLPKFPSEEPGGKEITFKRVLLNNCQEAFEG 304
Query: 160 GEREQEEANKADKEGEIKQTEEEREEKRIKARRRWLGNIRLIGELYKKKMLTERIMHECI 219
+ + E A G Q E+R+++RI + R LGNIRLIGEL K+KM+ E+I+H +
Sbjct: 305 ADSLRVEI--ASLTGP-DQEMEKRDKERI-FKLRTLGNIRLIGELLKQKMVPEKIVHHIV 360
Query: 220 KKLLGQYEN--PDEEDVEALCILMSTIGEMID-HPKAKEHMDAYFDRMEKLSNNMKLSSR 276
K+LLG + PDEE VEA+C +TIG+ +D +PK++ D YF + +L N +L+ R
Sbjct: 361 KELLGSDKKACPDEEHVEAICQFFNTIGKQLDENPKSRRINDTYFVHLRELVANPQLTPR 420
Query: 277 VRLMLKDSIELRKNKWQQRRKVEGPKKIEEVHRDAAQE---RQAQASRLARGPSMNSSSR 333
+ M++D I+LR N W RR K I E+H +A + R + + G R
Sbjct: 421 SKFMVRDLIDLRSNNWVPRRAEIKAKTISEIHTEAEKNLGLRPGATANMRNG-------R 473
Query: 334 RAP-MDFGPRGLSLGTP 349
AP P G S+ P
Sbjct: 474 NAPGGPLSPGGFSVNRP 490
>sp|Q93ZT6|IF4G1_ARATH Eukaryotic translation initiation factor isoform 4G-1
OS=Arabidopsis thaliana GN=EIF(ISO)4G1 PE=1 SV=1
Length = 780
Score = 166 bits (420), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 112/293 (38%), Positives = 166/293 (56%), Gaps = 20/293 (6%)
Query: 58 LSKRMRNLKWHIECRGDIGRLNAPNFKKLFEQVKAVNIDNAVTLAGVVSQIFDKALMEPT 117
LS+ R LK +G + +L + L Q+ I +A L GV++ IFDKA++EPT
Sbjct: 209 LSENDRVLKT---VKGILNKLTPEKYDLLKGQLIESGITSADILKGVITLIFDKAVLEPT 265
Query: 118 FCEMYANFFYFLAGELPDFSE---DNEKITFKRLLLNKCQEEFERGEREQEEANKADKEG 174
FC MYA + +LP F +++ITFKR+LLN CQE FE + +EE +
Sbjct: 266 FCPMYAKLCSDINDQLPTFPPAEPGDKEITFKRVLLNICQEAFEGASQLREELRQMSAPD 325
Query: 175 EIKQTEEEREEKRIKARRRWLGNIRLIGELYKKKMLTERIMHECIKKLLGQYEN--PDEE 232
+ E ER +K + + LGNIRLIGEL K+KM+ E+I+H +++LLG E P EE
Sbjct: 326 Q----EAERNDKEKLLKLKTLGNIRLIGELLKQKMVPEKIVHHIVQELLGADEKVCPAEE 381
Query: 233 DVEALCILMSTIGEMID-HPKAKEHMDAYFDRMEKLSNNMKLSSRVRLMLKDSIELRKNK 291
+VEA+C TIG+ +D + K+K D YF R++ LS N +L R+R M+++ I++R N
Sbjct: 382 NVEAICHFFKTIGKQLDGNVKSKRINDVYFKRLQALSKNPQLELRLRFMVQNIIDMRSNG 441
Query: 292 WQQRRKVEGPKKIEEVHRDAAQE---RQAQASRLARGPSMNSSSRRAPMDFGP 341
W RR+ + I E+H +A + R + + RG M SS P+ GP
Sbjct: 442 WVPRREEMKARTITEIHTEAEKNLGLRPGATANMRRG--MVSSG--GPVSPGP 490
>sp|P41110|IF4G1_RABIT Eukaryotic translation initiation factor 4 gamma 1 OS=Oryctolagus
cuniculus GN=EIF4G1 PE=1 SV=1
Length = 1402
Score = 165 bits (418), Expect = 4e-40, Method: Composition-based stats.
Identities = 106/290 (36%), Positives = 163/290 (56%), Gaps = 17/290 (5%)
Query: 72 RGDIGRLNAPNFKKLFEQVKAVNIDNAVTLAGVVSQIFDKALMEPTFCEMYANFFYFLAG 131
R + +L F++L +QV + ID G ++ + PT +
Sbjct: 571 RSILNKLTPQMFQQLMKQVTQLAIDTEGASKGSLTSSLRRPFQNPTSQWPSQHVPLPHGA 630
Query: 132 ELPDFSEDNEKITFKRLLLNKCQEEFERG-------EREQEEANKADKEGEIKQTEEERE 184
E + + F++LLLN+CQ+EFE+ E++Q+E ++A E ++ +EE E
Sbjct: 631 ESATTEKPTVTVNFRKLLLNRCQKEFEKDKDDDEVFEKKQKEMDEAATAEERERLKEELE 690
Query: 185 EKRIKARRRWLGNIRLIGELYKKKMLTERIMHECIKKLLGQYENPDEEDVEALCILMSTI 244
E R ARR LGNI+ IGEL+K KMLTE IMH+C+ KLL DEE +E LC L++TI
Sbjct: 691 EARDIARRCSLGNIKFIGELFKLKMLTEAIMHDCVVKLLRH----DEESLEFLCRLLTTI 746
Query: 245 GEMIDHPKAKEHMDAYFDRMEKLSNNMKLSSRVRLMLKDSIELRKNKWQQRRKVEGPKKI 304
G+ +D KAK MD YF++MEK+ K SSR+R ML+D ++LR++ W RR +GPK I
Sbjct: 747 GKDLDFEKAKPRMDQYFNQMEKIIKEKKTSSRIRFMLQDVLDLRQSNWVPRRGDQGPKTI 806
Query: 305 EEVHRDAAQERQAQASRLARGPSMNSSSRRAPMDFGPRG--LSLGTPIFN 352
+++H++A E + ++ + + S RR GP G +S G P+ +
Sbjct: 807 DQIHKEAEMEEHREHIKVQQLMAKGSDKRRG----GPPGPPISRGLPLVD 852
>sp|Q10475|IF4G_SCHPO Eukaryotic translation initiation factor 4 gamma
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=tif471 PE=1 SV=1
Length = 1403
Score = 163 bits (412), Expect = 2e-39, Method: Composition-based stats.
Identities = 104/291 (35%), Positives = 160/291 (54%), Gaps = 23/291 (7%)
Query: 72 RGDIGRLNAPNFKKLFEQVKAVNI-----DNAVTLAGVVSQIFDKALMEPTFCEMYANFF 126
+G + ++ F K+ +Q+ + + ++ TL V+ F+KA EP F MYA F
Sbjct: 1013 KGSLNKMTLEKFDKISDQILEIAMQSRKENDGRTLKQVIQLTFEKATDEPNFSNMYARFA 1072
Query: 127 YFLAGELPD-------FSEDNEKIT----FKRLLLNKCQEEFERGEREQEEANKADKEGE 175
+ + D ++N+ + F++ LL++CQE+FERG + + KA E E
Sbjct: 1073 RKMMDSIDDSIRDEGVLDKNNQPVRGGLLFRKYLLSRCQEDFERGWKANLPSGKAG-EAE 1131
Query: 176 IKQTEEEREEKRIKARRRWLGNIRLIGELYKKKMLTERIMHECIKKLLGQYENPDEEDVE 235
I ++E IK RR LG +R IGEL+K ML+E+IMHECIK+LLG +P+EE++E
Sbjct: 1132 I-MSDEYYVAAAIK--RRGLGLVRFIGELFKLSMLSEKIMHECIKRLLGNVTDPEEEEIE 1188
Query: 236 ALCILMSTIGEMIDHP-KAKEHMDAYFDRMEKLSNNMKLSSRVRLMLKDSIELRKNKWQQ 294
+LC L+ T+G ID K MD Y RME ++ L SR++ ML D ++ RKN W
Sbjct: 1189 SLCRLLMTVGVNIDATEKGHAAMDVYVLRMETITKIPNLPSRIKFMLMDVMDSRKNGWAV 1248
Query: 295 RRKVE-GPKKIEEVHRDAAQERQ-AQASRLARGPSMNSSSRRAPMDFGPRG 343
+ +VE GPK I E+H +A +++ A++ R + G R G RG
Sbjct: 1249 KNEVEKGPKTIAEIHEEAERKKALAESQRPSSGRMHGRDMNRGDSRMGGRG 1299
>sp|Q62448|IF4G2_MOUSE Eukaryotic translation initiation factor 4 gamma 2 OS=Mus musculus
GN=Eif4g2 PE=1 SV=2
Length = 906
Score = 145 bits (367), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 101/297 (34%), Positives = 155/297 (52%), Gaps = 31/297 (10%)
Query: 70 ECRGDIGRLNAPNFKKLFEQVKAVNIDNAVTLAGVVSQIFDKALMEPTFCEMYANFFYFL 129
+ RG + +L F KL ++ V +++ + L GV+ I DKAL EP + +YA L
Sbjct: 80 KVRGILNKLTPEKFDKLCLELLNVGVESKLILKGVILLIVDKALEEPKYSSLYAQLCLRL 139
Query: 130 AGELPDF--------SEDNEKITFKRLLLNKCQEEFERGEREQEEANKADKEGEIKQTEE 181
A + P+F + TF+RLL++K Q+EFE R + +K
Sbjct: 140 AEDAPNFDGPAAEGQPGQKQSTTFRRLLISKLQDEFENRTRNVDVYDK-----RENPLLP 194
Query: 182 EREEKRIKARRRWLGNIRLIGELYKKKMLTERIMHECIKKLLGQYENPD----EEDVEAL 237
E EE+R A+ + LGNI+ IGEL K ++ E I+H+CIK LL + + ED+E L
Sbjct: 195 EEEEQRAIAKIKMLGNIKFIGELGKLDLIHESILHKCIKTLLEKKKRVQLKDMGEDLECL 254
Query: 238 CILMSTIGEMIDHPKAKEHMDAYFDRMEKLSNNMKLSSRVRLMLKDSIELRKNKWQQRRK 297
C +M T+G +DH +AK MD YF RM L + +L +R+R +L+D++ELR++ W R+
Sbjct: 255 CQIMRTVGPRLDHERAKSLMDQYFARMCSLMLSKELPARIRFLLQDTVELREHHWVPRKA 314
Query: 298 V--EGPKKIEEVHRDAAQE---------RQAQASRLARGPSMNSSSRRAPMDFGPRG 343
GPK I ++ +DA ++ Q ++ GP M R MD P G
Sbjct: 315 FLDNGPKTINQIRQDAVKDLGVFIPAPMAQGRSDFFLEGPFMPP---RMKMDRDPLG 368
>sp|Q5R7J9|IF4G2_PONAB Eukaryotic translation initiation factor 4 gamma 2 OS=Pongo abelii
GN=EIF4G2 PE=2 SV=2
Length = 907
Score = 144 bits (364), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 92/259 (35%), Positives = 144/259 (55%), Gaps = 19/259 (7%)
Query: 70 ECRGDIGRLNAPNFKKLFEQVKAVNIDNAVTLAGVVSQIFDKALMEPTFCEMYANFFYFL 129
+ RG + +L F KL ++ V +++ + L GV+ I DKAL EP + +YA L
Sbjct: 80 KVRGILNKLTPEKFDKLCLELLNVGVESKLILKGVILLIVDKALEEPKYSSLYAQLCLRL 139
Query: 130 AGELPDF--------SEDNEKITFKRLLLNKCQEEFERGEREQEEANKADKEGEIKQTEE 181
A + P+F + TF+RLL++K Q+EFE R + +K
Sbjct: 140 AEDAPNFDGPAAEGQPGQKQSTTFRRLLISKLQDEFENRTRNVDVYDK-----RENPLLP 194
Query: 182 EREEKRIKARRRWLGNIRLIGELYKKKMLTERIMHECIKKLLGQYENPD----EEDVEAL 237
E EE+R A+ + LGNI+ IGEL K ++ E I+H+CIK LL + + ED+E L
Sbjct: 195 EEEEQRAIAKIKMLGNIKFIGELGKLDLIHESILHKCIKTLLEKKKRVQLKDMGEDLECL 254
Query: 238 CILMSTIGEMIDHPKAKEHMDAYFDRMEKLSNNMKLSSRVRLMLKDSIELRKNKWQQRRK 297
C +M T+G +DH +AK MD YF RM L + +L +R+R +L+D++ELR++ W R+
Sbjct: 255 CQIMRTVGPRLDHERAKSLMDQYFARMCSLMLSKELPARIRFLLQDTVELREHHWVPRKA 314
Query: 298 V--EGPKKIEEVHRDAAQE 314
GPK I ++ +DA ++
Sbjct: 315 FLDNGPKTINQIRQDAVKD 333
>sp|P78344|IF4G2_HUMAN Eukaryotic translation initiation factor 4 gamma 2 OS=Homo sapiens
GN=EIF4G2 PE=1 SV=1
Length = 907
Score = 144 bits (364), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 92/259 (35%), Positives = 144/259 (55%), Gaps = 19/259 (7%)
Query: 70 ECRGDIGRLNAPNFKKLFEQVKAVNIDNAVTLAGVVSQIFDKALMEPTFCEMYANFFYFL 129
+ RG + +L F KL ++ V +++ + L GV+ I DKAL EP + +YA L
Sbjct: 80 KVRGILNKLTPEKFDKLCLELLNVGVESKLILKGVILLIVDKALEEPKYSSLYAQLCLRL 139
Query: 130 AGELPDF--------SEDNEKITFKRLLLNKCQEEFERGEREQEEANKADKEGEIKQTEE 181
A + P+F + TF+RLL++K Q+EFE R + +K
Sbjct: 140 AEDAPNFDGPAAEGQPGQKQSTTFRRLLISKLQDEFENRTRNVDVYDK-----RENPLLP 194
Query: 182 EREEKRIKARRRWLGNIRLIGELYKKKMLTERIMHECIKKLLGQYENPD----EEDVEAL 237
E EE+R A+ + LGNI+ IGEL K ++ E I+H+CIK LL + + ED+E L
Sbjct: 195 EEEEQRAIAKIKMLGNIKFIGELGKLDLIHESILHKCIKTLLEKKKRVQLKDMGEDLECL 254
Query: 238 CILMSTIGEMIDHPKAKEHMDAYFDRMEKLSNNMKLSSRVRLMLKDSIELRKNKWQQRRK 297
C +M T+G +DH +AK MD YF RM L + +L +R+R +L+D++ELR++ W R+
Sbjct: 255 CQIMRTVGPRLDHERAKSLMDQYFARMCSLMLSKELPARIRFLLQDTVELREHHWVPRKA 314
Query: 298 V--EGPKKIEEVHRDAAQE 314
GPK I ++ +DA ++
Sbjct: 315 FLDNGPKTINQIRQDAVKD 333
>sp|Q95L46|IF4G2_BOVIN Eukaryotic translation initiation factor 4 gamma 2 OS=Bos taurus
GN=EIF4G2 PE=2 SV=2
Length = 907
Score = 144 bits (364), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 92/259 (35%), Positives = 144/259 (55%), Gaps = 19/259 (7%)
Query: 70 ECRGDIGRLNAPNFKKLFEQVKAVNIDNAVTLAGVVSQIFDKALMEPTFCEMYANFFYFL 129
+ RG + +L F KL ++ V +++ + L GV+ I DKAL EP + +YA L
Sbjct: 80 KVRGILNKLTPEKFDKLCLELLNVGVESKLILKGVILLIVDKALEEPKYSSLYAQLCLRL 139
Query: 130 AGELPDF--------SEDNEKITFKRLLLNKCQEEFERGEREQEEANKADKEGEIKQTEE 181
A + P+F + TF+RLL++K Q+EFE R + +K
Sbjct: 140 AEDAPNFDGPAAEGQPGQKQSTTFRRLLISKLQDEFENRTRNVDVYDK-----RENPLLP 194
Query: 182 EREEKRIKARRRWLGNIRLIGELYKKKMLTERIMHECIKKLLGQYENPD----EEDVEAL 237
E EE+R A+ + LGNI+ IGEL K ++ E I+H+CIK LL + + ED+E L
Sbjct: 195 EEEEQRAIAKIKMLGNIKFIGELGKLDLIHESILHKCIKTLLEKKKRVQLKDMGEDLECL 254
Query: 238 CILMSTIGEMIDHPKAKEHMDAYFDRMEKLSNNMKLSSRVRLMLKDSIELRKNKWQQRRK 297
C +M T+G +DH +AK MD YF RM L + +L +R+R +L+D++ELR++ W R+
Sbjct: 255 CQIMRTVGPRLDHERAKSLMDQYFARMCSLMLSKELPARIRFLLQDTVELREHHWVPRKA 314
Query: 298 V--EGPKKIEEVHRDAAQE 314
GPK I ++ +DA ++
Sbjct: 315 FLDNGPKTINQIRQDAVKD 333
>sp|P79398|IF4G2_RABIT Eukaryotic translation initiation factor 4 gamma 2 OS=Oryctolagus
cuniculus GN=EIF4G2 PE=2 SV=1
Length = 907
Score = 144 bits (364), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 92/259 (35%), Positives = 144/259 (55%), Gaps = 19/259 (7%)
Query: 70 ECRGDIGRLNAPNFKKLFEQVKAVNIDNAVTLAGVVSQIFDKALMEPTFCEMYANFFYFL 129
+ RG + +L F KL ++ V +++ + L GV+ I DKAL EP + +YA L
Sbjct: 80 KVRGILNKLTPEKFDKLCLELLNVGVESKLILKGVILLIVDKALEEPKYSSLYAQLCLRL 139
Query: 130 AGELPDF--------SEDNEKITFKRLLLNKCQEEFERGEREQEEANKADKEGEIKQTEE 181
A + P+F + TF+RLL++K Q+EFE R + +K
Sbjct: 140 AEDAPNFDGPAAEGQPGQKQSTTFRRLLISKLQDEFENRTRNVDVYDK-----RENPLLP 194
Query: 182 EREEKRIKARRRWLGNIRLIGELYKKKMLTERIMHECIKKLLGQYENPD----EEDVEAL 237
E EE+R A+ + LGNI+ IGEL K ++ E I+H+CIK LL + + ED+E L
Sbjct: 195 EEEEQRAIAKIKMLGNIKFIGELGKLDLIHESILHKCIKTLLEKKKRVQLQDMGEDLECL 254
Query: 238 CILMSTIGEMIDHPKAKEHMDAYFDRMEKLSNNMKLSSRVRLMLKDSIELRKNKWQQRRK 297
C +M T+G +DH +AK MD YF RM L + +L +R+R +L+D++ELR++ W R+
Sbjct: 255 CQIMRTVGPRLDHERAKSLMDQYFARMCSLMLSKELPARIRFLLQDTVELREHHWVPRKA 314
Query: 298 V--EGPKKIEEVHRDAAQE 314
GPK I ++ +DA ++
Sbjct: 315 FLDNGPKTINQIRQDAVKD 333
>sp|C7G046|Y6969_DICDI von Willebrand factor A domain-containing protein DDB_G0286969
OS=Dictyostelium discoideum GN=DDB_G0286969 PE=4 SV=1
Length = 2079
Score = 119 bits (297), Expect = 5e-26, Method: Composition-based stats.
Identities = 71/238 (29%), Positives = 127/238 (53%), Gaps = 15/238 (6%)
Query: 74 DIGRLNAPNFKKLFEQVKAVNIDNAVTLAGVVSQIFDKALMEPTFCEMYANFFYFLAGEL 133
++ R+ + L + + + + + L + +F+KA+++ + +YA L
Sbjct: 1323 NLNRITMDTYSSLIKNIDELKVPDEEALKSISKILFEKAIIDQKYSAVYAILAGHLDTTF 1382
Query: 134 PDFSEDNEKITFKRLLLNKCQEEFERGEREQEEANKADKEGEIKQTEEEREEKRIKARRR 193
P F+E ++ KR +L+ CQ EF +K+ EG ++E+ EE+ +RR
Sbjct: 1383 PKFAE----LSLKRAILDNCQTEF------SAVVDKSKFEG---LSKEDLEEQEFIIKRR 1429
Query: 194 WLGNIRLIGELYKKKMLTERIMHECIKKLLGQYENP-DEEDVEALCILMSTIGEMIDHPK 252
LGNI+ IGELYK +L E++ + +L+ + E DEE +E L +++TIG+ +D
Sbjct: 1430 VLGNIKFIGELYKHGVLGEKVAKAIVVQLITKCEERLDEESIEPLVKILNTIGKKLDEVD 1489
Query: 253 AKEHMDAYFDRMEKLSNNMKLSSRVRLMLKDSIELRKNKWQQRRKVEGPKKIEEVHRD 310
K + D YF ++ +SNN ++SR R +L D I+LR NKWQ + + K +E ++
Sbjct: 1490 -KANTDLYFSKVTNISNNPVVTSRGRFILLDLIDLRANKWQPKNSTQTKTKKDESDKE 1546
>sp|Q553R3|IF4G_DICDI Eukaryotic translation initiation factor 4 gamma OS=Dictyostelium
discoideum GN=eif4g PE=3 SV=1
Length = 1377
Score = 119 bits (297), Expect = 5e-26, Method: Composition-based stats.
Identities = 82/279 (29%), Positives = 144/279 (51%), Gaps = 45/279 (16%)
Query: 75 IGRLNAPNFKKLFEQVKAVNI-DNAVTLAGVVSQIFDKALMEPTFCEMYANF-------- 125
+ ++ F L E++ + I D+ G + IFDKAL E FC MY N
Sbjct: 777 LNKITPEKFDVLTEELLELGIVDDEKVHKGTIDLIFDKALNESKFCTMYTNLCKKIFEFE 836
Query: 126 ----------------------FYFLAGELPDF--SEDNEKITFKRLLLNKCQEEFERGE 161
++ ++ + D E N K F+ LLL+ CQ+E+E+
Sbjct: 837 KVKKEIAKRAVFEKIGVIETENYHKMSNKQRDEFDQEHNVKAVFRTLLLSTCQKEYEKIP 896
Query: 162 REQEEANKADKEGEIKQTEEER--EEKRIKARRRWLGNIRLIGELYKKKMLTERIMHECI 219
E DK E + EE+ EE + K R+R G I+ IGEL+K++ML+E+I+H +
Sbjct: 897 FE-----TVDKVPEDLKPEEKTDFEEGQFKERKRIFGLIKFIGELFKQQMLSEKIVHGIM 951
Query: 220 KKLLGQYENPDEEDVEALCILMSTIGEMID-HPKAKEHMDAYFDRMEKLSNNMK-LSSRV 277
L+G+ + P E +E C L+S +G+ + + +A +++ +YF RM++L +N + LS R+
Sbjct: 952 VSLIGELQRPSEIKLECFCKLLSIVGKTLSQNEQASKYLTSYFQRMQQLVDNSQTLSQRI 1011
Query: 278 RLMLKDSIELRKNKWQQRRKVEGPKKIEEVHRDAAQERQ 316
R ++++ ++L+ + W + E K ++EV +A Q +Q
Sbjct: 1012 RFLIQNVMDLKNSNWTLKVD-ESAKTLKEV--EATQNKQ 1047
>sp|P39935|IF4F1_YEAST Eukaryotic initiation factor 4F subunit p150 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=TIF4631 PE=1
SV=2
Length = 952
Score = 107 bits (267), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 135/255 (52%), Gaps = 18/255 (7%)
Query: 97 NAVTLAGVVSQIFDKALMEPTFCEMYANFFYFLAGEL-PDFS-EDNEKITFKRLLLN--- 151
N TL V+ QIF KA EP + MYA + EL PD + E NE T +L+L+
Sbjct: 641 NGETLKAVIEQIFLKACDEPHWSSMYAQLCGKVVKELNPDITDETNEGKTGPKLVLHYLV 700
Query: 152 -KCQEEFERGEREQEEANKADKEGEIKQTEEEREEKRIKARRRWLGNIRLIGELYKKKML 210
+C EF++G ++ N+ E + EE A+RR LG +R IG LY+ +L
Sbjct: 701 ARCHAEFDKGWTDKLPTNEDGTPLEPEMMSEEYY-AAASAKRRGLGLVRFIGFLYRLNLL 759
Query: 211 TERIMHECIKKLLGQ-YENPDEEDVEALCILMSTIGEMIDHP---------KAKEHMDAY 260
T ++M EC ++L+ ++P EE +E++ L++T+GE + + + +D+
Sbjct: 760 TGKMMFECFRRLMKDLTDSPSEETLESVVELLNTVGEQFETDSFRTGQATLEGSQLLDSL 819
Query: 261 FDRMEKLSNNMKLSSRVRLMLKDSIELRKNK-WQQRRKVEGPKKIEEVHRDAAQERQAQA 319
F ++ + K+SSR++ L D ELR +K W +K GPK I+++H + ++RQ +
Sbjct: 820 FGILDNIIQTAKISSRIKFKLIDIKELRHDKNWNSDKKDNGPKTIQQIHEEEERQRQLKN 879
Query: 320 SRLARGPSMNSSSRR 334
+ + N+SS R
Sbjct: 880 NSRSNSRRTNNSSNR 894
>sp|P39936|IF4F2_YEAST Eukaryotic initiation factor 4F subunit p130 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=TIF4632 PE=1
SV=1
Length = 914
Score = 100 bits (248), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/245 (32%), Positives = 133/245 (54%), Gaps = 22/245 (8%)
Query: 96 DNAVTLAGVVSQIFDKALMEPTFCEMYANFFYFLAGEL-PDFSE-DNEKITFKRLLLN-- 151
D+ TL V+ QIF KA EP + MYA + +L P+ + +NE +L+L+
Sbjct: 600 DDGETLKIVIEQIFHKACDEPHWSSMYAQLCGKVVKDLDPNIKDKENEGKNGPKLVLHYL 659
Query: 152 --KCQEEFERGEREQEEANKADKEGEIKQTEEEREEKRIKA--RRRWLGNIRLIGELYKK 207
+C EEFE+G ++ A + +G + E +E I A +RR LG +R IG LY
Sbjct: 660 VARCHEEFEKGWADKLPAGE---DGNPLEPEMMSDEYYIAAAAKRRGLGLVRFIGYLYCL 716
Query: 208 KMLTERIMHECIKKLLGQYEN-PDEEDVEALCILMSTIGEMIDH-----PKAKEH----M 257
+LT ++M EC ++L+ N P EE +E++ L++T+GE +H P+A +
Sbjct: 717 NLLTGKMMFECFRRLMKDLNNDPSEETLESVIELLNTVGEQFEHDKFVTPQATLEGSVLL 776
Query: 258 DAYFDRMEKLSNNMKLSSRVRLMLKDSIELRKNK-WQQRRKVEGPKKIEEVHRDAAQERQ 316
D F ++ + + +S+R++ L D ELR+ K W +K GPK I+++H++ Q RQ
Sbjct: 777 DNLFMLLQHIIDGGTISNRIKFKLIDVKELREIKHWNSAKKDAGPKTIQQIHQEEEQLRQ 836
Query: 317 AQASR 321
+ S+
Sbjct: 837 KKNSQ 841
>sp|Q5Z5Q3|C3H43_ORYSJ Zinc finger CCCH domain-containing protein 43 OS=Oryza sativa
subsp. japonica GN=Os06g0520600 PE=2 SV=1
Length = 711
Score = 72.4 bits (176), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 89 QVKAVNIDNAVTLAGVVSQIFDKALMEPTFCEMYANFFYFLAGELPDFSE---DNEKITF 145
Q+ I +A L V++ IF+K + EP FC YA +L L F D E+ITF
Sbjct: 405 QLIETRISSADILKDVINLIFEKVVAEPAFCSTYAQLCTYLNQNLTPFPPEDCDCEEITF 464
Query: 146 KRLLLNKCQEEFERGEREQEEANKADKEGEIKQTEEEREEKRIKARRRWLGNIRLIGELY 205
K+ L NKCQE FE E K G+ ++ E+ +E+ +K LGNI I L
Sbjct: 465 KQALSNKCQEIFESAHTVCSEIGKL--IGQDREMEQRDKERVVKLET--LGNINFIRALL 520
Query: 206 KKKMLTERIMHECIKKLL 223
KKK++T +I+ ++ ++
Sbjct: 521 KKKLITNKIIDHIVQAVM 538
>sp|Q8SVP8|IF4G_ENCCU Probable eukaryotic translation initiation factor 4 gamma homolog
OS=Encephalitozoon cuniculi (strain GB-M1) GN=EIF4G PE=3
SV=1
Length = 627
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 108/242 (44%), Gaps = 20/242 (8%)
Query: 70 ECRGDIGRLNAPNFKKLFEQVKAVNIDNAVTLAGVVSQIFDKALMEPTFCEMYANFFYFL 129
+ R + RL A N + + +KA+ + + + +FDKA+ EPTF + YA L
Sbjct: 205 QARLEFNRLTAKNIGLVIKNLKAIRVGTIEEMKEIAKILFDKAISEPTFVKYYALLVLDL 264
Query: 130 AGELPDFSEDNEKITFKRLLLNKCQEEFERGEREQEEANKADKEGEIKQTEEER------ 183
E E IT + E ++ ++ ++ E+ + EER
Sbjct: 265 KKEWQSEEEKTRDITQTVFFGTLLTLTLKTLENKERWGDEYERRKEM--SFEERMAYEEK 322
Query: 184 ----EEKRIKARRRWLGNIRLIGELYKKKMLTERIMHECIKKLLGQYENPDEEDVEALCI 239
E +R +RR LG I + LY +++ M+ CI L+ D E+VE LC
Sbjct: 323 LEEAETERYIKKRRTLGTIDFLSSLYSLNVISYVHMNACINTLMKL---DDSENVEVLCY 379
Query: 240 LMSTIGEMIDHPKAKEHMDAYF-DRMEKLSNNMKLSSRVRLMLKDSIELRKNKWQQRRKV 298
L+ IGE + KEH+ + + + N+ ++R+R M++ ++ +++ W+ R
Sbjct: 380 LIENIGEKL-VVSGKEHIISMVCSSLAQKKNSY--TNRIRYMIESLLD-KRSSWKPREAK 435
Query: 299 EG 300
G
Sbjct: 436 AG 437
>sp|Q7ZYB4|PAIP1_XENLA Polyadenylate-binding protein-interacting protein 1 OS=Xenopus
laevis GN=paip1 PE=1 SV=1
Length = 463
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 95/214 (44%), Gaps = 39/214 (18%)
Query: 95 IDNAVT----LAGVVSQIFDKALMEPTFCEMYANFFYFLAGELPDFSEDNEKITFKRLLL 150
++N VT L +V I+ +A+ P F A +L+ L + + F++LLL
Sbjct: 173 LNNCVTTDESLQELVELIYQQAISVPNFSYTGARLCNYLSNNL---HINPQNQNFRQLLL 229
Query: 151 NKCQEEFERGEREQEEANKADKEGEIKQTEEEREEKRIKARRRWLGNIRLIGELY----- 205
+CQ EFE+ +++A K D AR+++ + +GELY
Sbjct: 230 KRCQTEFEK----RDQAAKGDG----------------AARKQFHAFVLFLGELYLNLEI 269
Query: 206 ---KKKMLTERIMHECIKKLLGQ-YENPDEEDVEALCILMSTIGEMIDHP---KAKEHMD 258
K ++ I+ +++LL + NP ++++ L+ G +++ KA M+
Sbjct: 270 KGAKGQVTRAEILQSGLQELLNSLFSNPVDDNLMCAVKLLKLTGSVLEDAWKEKALSCME 329
Query: 259 AYFDRMEKLSNNMKLSSRVRLMLKDSIELRKNKW 292
RM+ + + S V+ ML +ELR + W
Sbjct: 330 EVMLRMKNVVLDANCSRDVKQMLLKLVELRSSNW 363
>sp|C4V8K5|IF4G_NOSCE Probable eukaryotic translation initiation factor 4 gamma homolog
OS=Nosema ceranae (strain BRL01) GN=EIF4G PE=3 SV=1
Length = 598
Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 109/233 (46%), Gaps = 23/233 (9%)
Query: 74 DIGRLNAPNFKKLFEQVKAVNIDNAVTLAGVVSQIFDKALMEPTFCEMYANFFYFLAGEL 133
++ +L N K++ +K +NI+ + + I KA+ EP +C +YA + G L
Sbjct: 215 ELNKLTNTNIKRIITNLKNLNIETIQQAKYLGNLIVFKAINEPQYCNLYA----MVVGAL 270
Query: 134 -PDFSEDNE------KITFKRLLLNKC----QEEFERGEREQEEANKADKEGEIKQTEEE 182
DF E + F +L +E+ E + + + N E ++ EE
Sbjct: 271 KKDFKSKEELGLHKKQTAFFGTVLTSAMKVLEEKVEWADTKVLDKNLYKNAFEYERAFEE 330
Query: 183 REEKRIKARRRWLGNIRLIGELYKKKMLTERIMHECIKKLLGQYEN-PDEEDVEALCILM 241
+E +R +++ LG + L+ +LY ++T + H I+ L ++ N +EE VE L +
Sbjct: 331 QETERYLRKKKTLGAVNLLCDLYNLDVIT--LKH--IQSRLNEFLNIENEEVVEVLGKFI 386
Query: 242 STIGEMIDHPKAKEHMDAYFDRMEKLSNNMKLSSRVRLMLKDSIELRKNKWQQ 294
IGE + ++ + ++ N K S+RV+ + D ++ +KN W++
Sbjct: 387 EKIGEKMYLNDKSDYANMICSYLDACKN--KYSNRVKFYIMDVLDKKKN-WKK 436
>sp|Q8VE62|PAIP1_MOUSE Polyadenylate-binding protein-interacting protein 1 OS=Mus musculus
GN=Paip1 PE=2 SV=1
Length = 400
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 92/212 (43%), Gaps = 37/212 (17%)
Query: 93 VNIDNAVTLAGVVSQIFDKALMEPTFCEMYANFFYFLAGELPDFSEDNEKITFKRLLLNK 152
V D+A L +V I+ +A P F M A +L+ L + + F++LLL +
Sbjct: 112 VTTDDA--LQELVELIYQQATSIPNFSYMGARLCNYLSHHL---TISPQSGNFRQLLLQR 166
Query: 153 CQEEFERGEREQEEANKADKEGEIKQTEEEREEKRIKARRRWLGNIRLIGELY------- 205
C+ E+E +++A K D+ R+R+ + +GELY
Sbjct: 167 CRTEYEA----KDQAAKGDE----------------VTRKRFHAFVLFLGELYLNLEIKG 206
Query: 206 -KKKMLTERIMHECIKKLLGQ-YENPDEEDVEALCILMSTIGEMIDHP---KAKEHMDAY 260
++ I+ +++LL + NP ++++ L+ G +++ K K M+
Sbjct: 207 TNGQVTRADILQVGLRELLNALFSNPMDDNLICAVKLLKLTGSVLEDTWKEKGKTDMEEI 266
Query: 261 FDRMEKLSNNMKLSSRVRLMLKDSIELRKNKW 292
R+E + + S V+ ML +ELR + W
Sbjct: 267 IQRIENVVLDANCSRDVKQMLLKLVELRSSNW 298
>sp|Q9H074|PAIP1_HUMAN Polyadenylate-binding protein-interacting protein 1 OS=Homo sapiens
GN=PAIP1 PE=1 SV=1
Length = 479
Score = 41.6 bits (96), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 92/212 (43%), Gaps = 37/212 (17%)
Query: 93 VNIDNAVTLAGVVSQIFDKALMEPTFCEMYANFFYFLAGELPDFSEDNEKITFKRLLLNK 152
V D+A L +V I+ +A P F M A +L+ L + + F++LLL +
Sbjct: 191 VTTDDA--LQELVELIYQQATSIPNFSYMGARLCNYLSHHL---TISPQSGNFRQLLLQR 245
Query: 153 CQEEFERGEREQEEANKADKEGEIKQTEEEREEKRIKARRRWLGNIRLIGELY------- 205
C+ E+E +++A K D+ R+R+ + +GELY
Sbjct: 246 CRTEYEV----KDQAAKGDE----------------VTRKRFHAFVLFLGELYLNLEIKG 285
Query: 206 -KKKMLTERIMHECIKKLLGQ-YENPDEEDVEALCILMSTIGEMIDHP---KAKEHMDAY 260
++ I+ +++LL + NP ++++ L+ G +++ K K M+
Sbjct: 286 TNGQVTRADILQVGLRELLNALFSNPMDDNLICAVKLLKLTGSVLEDAWKEKGKMDMEEI 345
Query: 261 FDRMEKLSNNMKLSSRVRLMLKDSIELRKNKW 292
R+E + + S V+ ML +ELR + W
Sbjct: 346 IQRIENVVLDANCSRDVKQMLLKLVELRSSNW 377
>sp|Q9HAU5|RENT2_HUMAN Regulator of nonsense transcripts 2 OS=Homo sapiens GN=UPF2 PE=1
SV=1
Length = 1272
Score = 37.7 bits (86), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 197 NIRLIGELYKKKMLTERIMHECIKKLLGQYENPDEEDVEALCILMSTIGE-MIDHPKAKE 255
+R IGEL K KM T+ C+K LL + + +E C L+ T G + P++
Sbjct: 666 TVRFIGELTKFKMFTKNDTLHCLKMLLSDFSH---HHIEMACTLLETCGRFLFRSPESHL 722
Query: 256 HMDAYFDRMEKLSNNMKLSSRVRLMLKDS 284
++M + M L +R M++++
Sbjct: 723 RTSVLLEQMMRKKQAMHLDARYVTMVENA 751
Score = 32.7 bits (73), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 25/124 (20%), Positives = 50/124 (40%), Gaps = 21/124 (16%)
Query: 189 KARRRWLGNIRLIGELYKKKMLTERIMHECIKKLLGQYENPDEED-----------VEAL 237
K +R + + + +GELY +M+ ++ + NPD + +
Sbjct: 863 KFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFGVNPDGSPSSLDPPEHLFRIRLV 922
Query: 238 CILMSTIGEMIDHPKAKEHMD---AYFDR-------MEKLSNNMKLSSRVRLMLKDSIEL 287
C ++ T G+ D +K +D YF R +E + + + M+ D++EL
Sbjct: 923 CTILDTCGQYFDRGSSKRKLDCFLVYFQRYVWWKKSLEVWTKDHPFPIDIDYMISDTLEL 982
Query: 288 RKNK 291
+ K
Sbjct: 983 LRPK 986
>sp|Q4P149|XRN2_USTMA 5'-3' exoribonuclease 2 OS=Ustilago maydis (strain 521 / FGSC 9021)
GN=RAT1 PE=3 SV=3
Length = 1233
Score = 37.0 bits (84), Expect = 0.26, Method: Composition-based stats.
Identities = 34/135 (25%), Positives = 59/135 (43%), Gaps = 12/135 (8%)
Query: 228 NPDEEDVEALCILMSTIGEMIDHPKAK-------EHMDAYFDRMEKLSNNMKLSSRVRLM 280
NP+ E+ + L + M+ I HP+ K E M F E++ NM R+ +M
Sbjct: 47 NPNGEEFDCLYLDMNGIVHPCTHPEGKPAPETEEEMMVEVFAYTERVV-NMVRPRRLLMM 105
Query: 281 LKDSIELRKNKWQQR-RKVEGPKKIEEVHRDAAQERQAQASRLARGPSMNSSSRRAPMDF 339
D + R QQR R+ K+ E H +E+ A A A+G +++ +
Sbjct: 106 AIDGVAPRAKMNQQRSRRFRAAKEAREKHE---EEQAALAEWKAKGLGATDDEKKSKRAW 162
Query: 340 GPRGLSLGTPIFNII 354
++ GTP +++
Sbjct: 163 DSNAITPGTPFMDLL 177
>sp|Q5EAQ1|M4GDB_DANRE MIF4G domain-containing protein B OS=Danio rerio GN=mif4gdb PE=1
SV=1
Length = 222
Score = 36.2 bits (82), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 85/204 (41%), Gaps = 35/204 (17%)
Query: 98 AVTLAGVVSQIFDKALMEPTFCEMYANFFYFLAGELPDFSEDNEKITFKRLLLNKCQEEF 157
+V L V S I D++L + F Y + + + N + F+R LLN+ Q+EF
Sbjct: 31 SVDLEKVSSVIVDQSLKDQVFSREAGRICYTIVQ--AEAKQTNGSV-FRRNLLNRLQQEF 87
Query: 158 ERGEREQEEANKADKEGEIKQTEEEREEKRIKARRRWLGNIRLIGELYKKKMLTERIM-- 215
+ REE R ++ + W+ + I ++ + M
Sbjct: 88 -----------------------KAREETRKRSTQEWVCLVSFICNIFDYLKVNNMPMVA 124
Query: 216 -----HECIKKLLGQYENPDEEDVEALCILMSTIGEMIDHPKAKEHMDAYFDRM-EKLSN 269
++C+ +L +EE+V+ L + + IG+ ++ + MD F+ + +
Sbjct: 125 LVHPVYDCLFRLAQSDALKNEEEVDCLVLQLHRIGDQLEKMNV-QLMDELFNLLRDGFLL 183
Query: 270 NMKLSSRVRLMLKDSIELRKNKWQ 293
LSS RL+L + +E R W+
Sbjct: 184 QEDLSSMGRLLLLEILEFRAGGWK 207
>sp|B0UXU6|M4GDA_DANRE MIF4G domain-containing protein A OS=Danio rerio GN=mif4gda PE=2
SV=1
Length = 216
Score = 35.0 bits (79), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 40/208 (19%), Positives = 84/208 (40%), Gaps = 33/208 (15%)
Query: 92 AVNIDNAVTLAGVVSQIFDKALMEPTFCEMYANFFYFLAGELPDFSEDNEKITFKRLLLN 151
A+ V L + + + + +L + +FC+ Y + ++ F+R LLN
Sbjct: 19 AIKDPKTVDLEKLSNAVVEHSLKDLSFCKDAGRMCY---AVVQAEAQKTASSVFRRNLLN 75
Query: 152 KCQEEFERGEREQEEANKADKEGEIKQTEEEREEKRIKARRRWLGNIRLIGELYKK-KML 210
+ Q+EF REE R ++ + W+ + I ++ K+
Sbjct: 76 RLQQEFI-----------------------AREETRKRSMQEWVCVVTFICSIFDYIKVN 112
Query: 211 TERI------MHECIKKLLGQYENPDEEDVEALCILMSTIGEMIDHPKAKEHMDAYFDRM 264
I +++C+ L +EE+V+ L + + +GE ++ ++ ++
Sbjct: 113 NSPIAALVDPVYDCLFGLAQPDSLMNEEEVDCLVVQLHRVGEQLEQTNSERMNQLFYLLR 172
Query: 265 EKLSNNMKLSSRVRLMLKDSIELRKNKW 292
+ LSS RL+L + +E R + W
Sbjct: 173 DGFLLQEDLSSMTRLLLLEILEFRASGW 200
>sp|Q9SGT2|PUB58_ARATH Putative U-box domain-containing protein 58 OS=Arabidopsis thaliana
GN=PUB58 PE=2 SV=3
Length = 420
Score = 34.3 bits (77), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 72/174 (41%), Gaps = 20/174 (11%)
Query: 121 MYANFFYFLAGELPDFSEDNEK---ITFKRLLLNKCQEEFERGEREQEEANKADKEGEIK 177
++A L ELP D TF+RL L KC+ E E + E +
Sbjct: 8 LFARLCVELFHELPPLPSDESHGDITTFERLFLRKCRIELENASPKTEHLPLV----YVD 63
Query: 178 QTEEEREEKRIKARRRWLGNIRLIGELYKKKMLTERIMHECIKKLLGQYENPDEEDVEAL 237
+T R++ +R++ E+YK +TE I+ L+ P E +A+
Sbjct: 64 ETN----------YYRFIKTVRVLAEVYKNSKITETTRKSMIQVLMNPI-LPPERITDAM 112
Query: 238 CILMSTIGEMIDHPKAKEHMDAYF--DRMEKLSNNMKLSSRVRLMLKDSIELRK 289
+ S IG++ D + E + R+ +L N ++R +D++ ++K
Sbjct: 113 NLFRSIIGKLADFHFSDEKFNQLVRSSRVVELEGNYNEEVKLRKEAEDALAMKK 166
>sp|Q3UFM5|NOM1_MOUSE Nucleolar MIF4G domain-containing protein 1 OS=Mus musculus GN=Nom1
PE=2 SV=2
Length = 854
Score = 33.9 bits (76), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 57/115 (49%), Gaps = 11/115 (9%)
Query: 200 LIGELYKKKMLTERIMHECIKKLLGQYENPDEEDVEALCILMSTIGEMI---DHPKAKEH 256
+I LY ++ ++ + +KKL+G + E+D+E + +++ +G + D KE
Sbjct: 462 MIAHLYNFHVVQSILIFDILKKLVGTF---TEKDIELILLMLKNVGFALRKDDALSLKEL 518
Query: 257 MDAYFDRMEKLSNNMKLSSRVRLMLKDSIELRKNKWQQRRKVEG--PKKIEEVHR 309
+ + N + +RVR ML+ + L+ N RK+ G P+ +E++ +
Sbjct: 519 ITEAQTQASGAGNKFQDQNRVRFMLETMLALKNNDL---RKIPGYNPEPVEKLKK 570
>sp|Q5C9Z4|NOM1_HUMAN Nucleolar MIF4G domain-containing protein 1 OS=Homo sapiens GN=NOM1
PE=1 SV=1
Length = 860
Score = 32.3 bits (72), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 25/115 (21%), Positives = 57/115 (49%), Gaps = 11/115 (9%)
Query: 200 LIGELYKKKMLTERIMHECIKKLLGQYENPDEEDVEALCILMSTIGEMI---DHPKAKEH 256
+I LY ++ ++ + +KKL+G + E+D+E + +++ +G + D KE
Sbjct: 468 VIAHLYNFHVVQSLLIFDILKKLIGTF---TEKDIELILLMLKNVGFSLRKDDALSLKEL 524
Query: 257 MDAYFDRMEKLSNNMKLSSRVRLMLKDSIELRKNKWQQRRKVEG--PKKIEEVHR 309
+ + + + +R+R ML+ + L+ N RK+ G P+ +E++ +
Sbjct: 525 ITEAQTKASGAGSEFQDQTRIRFMLETMLALKNNDM---RKIPGYDPEPVEKLRK 576
>sp|Q2NIF5|SYN_AYWBP Asparagine--tRNA ligase OS=Aster yellows witches'-broom phytoplasma
(strain AYWB) GN=asnS PE=3 SV=1
Length = 503
Score = 32.0 bits (71), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 4/49 (8%)
Query: 228 NPDEEDVEALCILMSTIGEMIDHPKAKEHMDAYFDRMEKLSNNMKLSSR 276
NPD++ V A+ +L +GE+I + +E++ ++M N MK+S +
Sbjct: 408 NPDQKTVAAMDLLFPRVGELIGGSQREENLSVLIEKM----NQMKISQK 452
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 129,294,052
Number of Sequences: 539616
Number of extensions: 5244801
Number of successful extensions: 37010
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 160
Number of HSP's successfully gapped in prelim test: 393
Number of HSP's that attempted gapping in prelim test: 32361
Number of HSP's gapped (non-prelim): 3611
length of query: 369
length of database: 191,569,459
effective HSP length: 119
effective length of query: 250
effective length of database: 127,355,155
effective search space: 31838788750
effective search space used: 31838788750
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)