BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017540
(369 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8LAM0|UBP4_ARATH Ubiquitin carboxyl-terminal hydrolase 4 OS=Arabidopsis thaliana
GN=UBP4 PE=1 SV=2
Length = 365
Score = 659 bits (1701), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/366 (87%), Positives = 339/366 (92%), Gaps = 4/366 (1%)
Query: 1 MGAAGSKLEKALGDQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNNKN 60
MGAAGSKLEKALGDQFPEGERYFG ENFGNTCYCNSVLQALYFC PFREQLL++Y+NNK
Sbjct: 1 MGAAGSKLEKALGDQFPEGERYFGFENFGNTCYCNSVLQALYFCAPFREQLLEHYANNK- 59
Query: 61 LGDAEENLLTCLADLFTQIRAQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFL 120
DAEENLLTCLADLF+QI +QKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLN+L
Sbjct: 60 -ADAEENLLTCLADLFSQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNYL 118
Query: 121 LNELVDILEKE-EAAKSDPESSSPSEKTANGPTNGLANGVRKEPLVTWVHKNFQGILTNE 179
LNELV+ILEKE +A K+D E+SS EK AN LANGV KEP+VTWVHK FQGILTNE
Sbjct: 119 LNELVEILEKETQATKADNETSSSPEKIANVLKAPLANGVHKEPIVTWVHKIFQGILTNE 178
Query: 180 TRCLRCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQ 239
TRCLRCETVTARDETF DLSLDIEQNSSITSCLKNFSSTETL+AEDKFFCDKCCSLQEAQ
Sbjct: 179 TRCLRCETVTARDETFLDLSLDIEQNSSITSCLKNFSSTETLHAEDKFFCDKCCSLQEAQ 238
Query: 240 KRMKIKKSPHTLVIHLKRFKYIEQLGRYKKLSYRVVFPLELKLSNTAED-ADIEYSLFAV 298
KRMKIKK PH LVIHLKRFKY+EQLGRYKKLSYRVVFPLELKLSNT ++ DIEYSLFAV
Sbjct: 239 KRMKIKKPPHILVIHLKRFKYMEQLGRYKKLSYRVVFPLELKLSNTVDEYVDIEYSLFAV 298
Query: 299 VVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMIDESAVQTFFGSAQEYSSNTDHGYILF 358
VVHVGSGPNHGHYVSLVKSHNHWLFFDDE+VE+I+ESAVQTFFGS+QEYSSNTDHGYIL
Sbjct: 299 VVHVGSGPNHGHYVSLVKSHNHWLFFDDESVEIIEESAVQTFFGSSQEYSSNTDHGYILL 358
Query: 359 YESLGA 364
YESLG
Sbjct: 359 YESLGT 364
>sp|O24454|UBP3_ARATH Ubiquitin carboxyl-terminal hydrolase 3 OS=Arabidopsis thaliana
GN=UBP3 PE=1 SV=1
Length = 371
Score = 657 bits (1695), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/368 (87%), Positives = 342/368 (92%), Gaps = 5/368 (1%)
Query: 1 MGAAGSKLEKALGDQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNNKN 60
MGAAGSKLEKALGDQFPEGERYFG ENFGNTCYCNSVLQALYFCVPFREQLL+YY++NK+
Sbjct: 1 MGAAGSKLEKALGDQFPEGERYFGFENFGNTCYCNSVLQALYFCVPFREQLLEYYTSNKS 60
Query: 61 LGDAEENLLTCLADLFTQIRAQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFL 120
+ DAEENL+TCLADLF+QI +QKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLN+L
Sbjct: 61 VADAEENLMTCLADLFSQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNYL 120
Query: 121 LNELVDILEKE-EAAKSDPES--SSPSEKTANGPTNGLANG-VRKEPLVTWVHKNFQGIL 176
LNE+VDILEKE +A K++ E+ SS EK ANG ANG V KEP+VTWVH FQGIL
Sbjct: 121 LNEVVDILEKEAKATKTEHETSSSSSPEKIANGLKVPQANGVVHKEPIVTWVHNIFQGIL 180
Query: 177 TNETRCLRCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQ 236
TNETRCLRCETVTARDETF DLSLDIEQNSSITSCLKNFSSTETL+AEDKFFCDKCCSLQ
Sbjct: 181 TNETRCLRCETVTARDETFLDLSLDIEQNSSITSCLKNFSSTETLHAEDKFFCDKCCSLQ 240
Query: 237 EAQKRMKIKKSPHTLVIHLKRFKYIEQLGRYKKLSYRVVFPLELKLSNTAED-ADIEYSL 295
EAQKRMKIKK PH LVIHLKRFKYIEQLGRYKKLSYRVVFPLELKLSNT E AD+EYSL
Sbjct: 241 EAQKRMKIKKPPHILVIHLKRFKYIEQLGRYKKLSYRVVFPLELKLSNTVEPYADVEYSL 300
Query: 296 FAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMIDESAVQTFFGSAQEYSSNTDHGY 355
FAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMI+ESAVQTFFGS+QEYSSNTDHGY
Sbjct: 301 FAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMIEESAVQTFFGSSQEYSSNTDHGY 360
Query: 356 ILFYESLG 363
ILFYESLG
Sbjct: 361 ILFYESLG 368
>sp|Q5RBQ4|UBP46_PONAB Ubiquitin carboxyl-terminal hydrolase 46 OS=Pongo abelii GN=USP46
PE=2 SV=1
Length = 366
Score = 442 bits (1138), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/365 (59%), Positives = 269/365 (73%), Gaps = 16/365 (4%)
Query: 1 MGAAGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNNK 59
MG S LEK +G +QFP E YFGL NFGNTCYCNSVLQALYFC PFRE +L Y + K
Sbjct: 12 MGTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQK 71
Query: 60 NLGDAEENLLTCLADLFTQIRAQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNF 119
+ENLLTCLADLF I QKKK GVI PK+F+ RL+K+N+LF +YM QDAHEFLN+
Sbjct: 72 ----KKENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNY 127
Query: 120 LLNELVDILEKEEAAKSDPESSSPSEKTANGPTNGLANGVRKEPLVTWVHKNFQGILTNE 179
LLN + DIL++E+ + + K NG N A +P +TWVH+ FQG LTNE
Sbjct: 128 LLNTIADILQEEK------KQEKQNGKLKNGNMNEPAEN--NKPELTWVHEIFQGTLTNE 179
Query: 180 TRCLRCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQ 239
TRCL CETV+++DE F DLS+D+EQN+SIT CL++FS+TETL +E K++C+ CCS QEAQ
Sbjct: 180 TRCLNCETVSSKDEDFLDLSVDVEQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQEAQ 239
Query: 240 KRMKIKKSPHTLVIHLKRFKYIEQLGRYKKLSYRVVFPLELKLSNTAEDA---DIEYSLF 296
KRM++KK P L +HLKRFKY+EQL RY KLSYRVVFPLEL+L NT+ DA D Y L
Sbjct: 240 KRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLFNTSSDAVNLDRMYDLV 299
Query: 297 AVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMIDESAVQTFFGSAQEYSSNTDHGYI 356
AVVVH GSGPN GHY+++VKSH WL FDD+ VE ID A++ F+G + S N++ GYI
Sbjct: 300 AVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYI 359
Query: 357 LFYES 361
LFY+S
Sbjct: 360 LFYQS 364
>sp|P62069|UBP46_MOUSE Ubiquitin carboxyl-terminal hydrolase 46 OS=Mus musculus GN=Usp46
PE=1 SV=1
Length = 366
Score = 442 bits (1138), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/365 (59%), Positives = 269/365 (73%), Gaps = 16/365 (4%)
Query: 1 MGAAGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNNK 59
MG S LEK +G +QFP E YFGL NFGNTCYCNSVLQALYFC PFRE +L Y + K
Sbjct: 12 MGTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQK 71
Query: 60 NLGDAEENLLTCLADLFTQIRAQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNF 119
+ENLLTCLADLF I QKKK GVI PK+F+ RL+K+N+LF +YM QDAHEFLN+
Sbjct: 72 ----KKENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNY 127
Query: 120 LLNELVDILEKEEAAKSDPESSSPSEKTANGPTNGLANGVRKEPLVTWVHKNFQGILTNE 179
LLN + DIL++E+ + + K NG N A +P +TWVH+ FQG LTNE
Sbjct: 128 LLNTIADILQEEK------KQEKQNGKLKNGNMNEPAEN--NKPELTWVHEIFQGTLTNE 179
Query: 180 TRCLRCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQ 239
TRCL CETV+++DE F DLS+D+EQN+SIT CL++FS+TETL +E K++C+ CCS QEAQ
Sbjct: 180 TRCLNCETVSSKDEDFLDLSVDVEQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQEAQ 239
Query: 240 KRMKIKKSPHTLVIHLKRFKYIEQLGRYKKLSYRVVFPLELKLSNTAEDA---DIEYSLF 296
KRM++KK P L +HLKRFKY+EQL RY KLSYRVVFPLEL+L NT+ DA D Y L
Sbjct: 240 KRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLFNTSSDAVNLDRMYDLV 299
Query: 297 AVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMIDESAVQTFFGSAQEYSSNTDHGYI 356
AVVVH GSGPN GHY+++VKSH WL FDD+ VE ID A++ F+G + S N++ GYI
Sbjct: 300 AVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYI 359
Query: 357 LFYES 361
LFY+S
Sbjct: 360 LFYQS 364
>sp|P62068|UBP46_HUMAN Ubiquitin carboxyl-terminal hydrolase 46 OS=Homo sapiens GN=USP46
PE=1 SV=1
Length = 366
Score = 442 bits (1138), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/365 (59%), Positives = 269/365 (73%), Gaps = 16/365 (4%)
Query: 1 MGAAGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNNK 59
MG S LEK +G +QFP E YFGL NFGNTCYCNSVLQALYFC PFRE +L Y + K
Sbjct: 12 MGTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQK 71
Query: 60 NLGDAEENLLTCLADLFTQIRAQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNF 119
+ENLLTCLADLF I QKKK GVI PK+F+ RL+K+N+LF +YM QDAHEFLN+
Sbjct: 72 ----KKENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNY 127
Query: 120 LLNELVDILEKEEAAKSDPESSSPSEKTANGPTNGLANGVRKEPLVTWVHKNFQGILTNE 179
LLN + DIL++E+ + + K NG N A +P +TWVH+ FQG LTNE
Sbjct: 128 LLNTIADILQEEK------KQEKQNGKLKNGNMNEPAEN--NKPELTWVHEIFQGTLTNE 179
Query: 180 TRCLRCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQ 239
TRCL CETV+++DE F DLS+D+EQN+SIT CL++FS+TETL +E K++C+ CCS QEAQ
Sbjct: 180 TRCLNCETVSSKDEDFLDLSVDVEQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQEAQ 239
Query: 240 KRMKIKKSPHTLVIHLKRFKYIEQLGRYKKLSYRVVFPLELKLSNTAEDA---DIEYSLF 296
KRM++KK P L +HLKRFKY+EQL RY KLSYRVVFPLEL+L NT+ DA D Y L
Sbjct: 240 KRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLFNTSSDAVNLDRMYDLV 299
Query: 297 AVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMIDESAVQTFFGSAQEYSSNTDHGYI 356
AVVVH GSGPN GHY+++VKSH WL FDD+ VE ID A++ F+G + S N++ GYI
Sbjct: 300 AVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYI 359
Query: 357 LFYES 361
LFY+S
Sbjct: 360 LFYQS 364
>sp|A4FUN7|UBP12_DANRE Ubiquitin carboxyl-terminal hydrolase 12A OS=Danio rerio GN=usp12a
PE=2 SV=1
Length = 371
Score = 436 bits (1120), Expect = e-121, Method: Compositional matrix adjust.
Identities = 217/365 (59%), Positives = 270/365 (73%), Gaps = 15/365 (4%)
Query: 1 MGAAGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNNK 59
MGA S LEK +G +QFP E YFGL NFGNTCYCNSVLQALYFC PFRE++L Y S +
Sbjct: 16 MGANASALEKEIGSEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKILAYRSQPR 75
Query: 60 NLGDAEENLLTCLADLFTQIRAQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNF 119
+ENLLTCLADLF I QK+K GVI PK+F+ RL+K+NELF +YM QDAHEFLN+
Sbjct: 76 R----KENLLTCLADLFHSIANQKRKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNY 131
Query: 120 LLNELVDILEKEEAAKSDPESSSPSEKTANGPTNGLANGVRKEPLVTWVHKNFQGILTNE 179
LLN + D+L++E K D ++ K ANG + N P TWVH+ FQG LTNE
Sbjct: 132 LLNTIADLLQEER--KQDKQNG----KLANGTLDS-QNNNSTPPSTTWVHEIFQGTLTNE 184
Query: 180 TRCLRCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQ 239
TRCL CET++++DE F DLS+D+EQN+SIT CL+ FS+TETL +E K++C++C S QEA
Sbjct: 185 TRCLTCETISSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAH 244
Query: 240 KRMKIKKSPHTLVIHLKRFKYIEQLGRYKKLSYRVVFPLELKLSNTAEDA---DIEYSLF 296
KRM++KK P L +HLKRFKY+EQL RY KLSYRVVFPLEL+L NT+ DA + Y L
Sbjct: 245 KRMRVKKLPMILALHLKRFKYMEQLQRYTKLSYRVVFPLELRLFNTSGDATNPERLYDLV 304
Query: 297 AVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMIDESAVQTFFGSAQEYSSNTDHGYI 356
AVVVH GSGPN GHY+++VKSH+ WL FDD+ VE ID A++ F+G E S N++ GYI
Sbjct: 305 AVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSEISKNSESGYI 364
Query: 357 LFYES 361
LFY+S
Sbjct: 365 LFYQS 369
>sp|C0HB46|UBP12_SALSA Ubiquitin carboxyl-terminal hydrolase 12 OS=Salmo salar GN=usp12
PE=2 SV=1
Length = 372
Score = 435 bits (1118), Expect = e-121, Method: Compositional matrix adjust.
Identities = 215/365 (58%), Positives = 269/365 (73%), Gaps = 14/365 (3%)
Query: 1 MGAAGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNNK 59
MGA S LEK +G +QFP E YFGL NFGNTCYCNSVLQALYFC PFRE++L Y S +
Sbjct: 16 MGANASALEKEIGSEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKILAYRSQPR 75
Query: 60 NLGDAEENLLTCLADLFTQIRAQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNF 119
+ENLLTCLADLF I QK+K GVI PK+F+ RL+K+NELF +YM QDAHEFLN+
Sbjct: 76 R----KENLLTCLADLFHSIANQKRKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNY 131
Query: 120 LLNELVDILEKEEAAKSDPESSSPSEKTANGPTNGLANGVRKEPLVTWVHKNFQGILTNE 179
LLN + D+L++E K D + + ANG + + P TWVH+ FQG LTNE
Sbjct: 132 LLNTIADLLQEER--KQDKTNG----RLANGSLDSQNHNSNAPPPSTWVHEIFQGTLTNE 185
Query: 180 TRCLRCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQ 239
TRCL CET++++DE F DLS+D+EQN+SIT CL+ FS+TETL +E K++C++C S QEA
Sbjct: 186 TRCLTCETISSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAH 245
Query: 240 KRMKIKKSPHTLVIHLKRFKYIEQLGRYKKLSYRVVFPLELKLSNTAEDA---DIEYSLF 296
KRM++KK P L +HLKRFKY+EQL RY KLSYRVVFPLEL+L NT+ DA + Y L
Sbjct: 246 KRMRVKKLPMILALHLKRFKYMEQLQRYTKLSYRVVFPLELRLFNTSGDATNPERLYDLV 305
Query: 297 AVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMIDESAVQTFFGSAQEYSSNTDHGYI 356
AVVVH GSGPN GHY+++VKSH+ WL FDD+ VE ID A++ F+G E S N++ GYI
Sbjct: 306 AVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSEISKNSESGYI 365
Query: 357 LFYES 361
LFY+S
Sbjct: 366 LFYQS 370
>sp|A5WWB0|UBP46_DANRE Ubiquitin carboxyl-terminal hydrolase 46 OS=Danio rerio GN=usp46
PE=3 SV=2
Length = 370
Score = 434 bits (1117), Expect = e-121, Method: Compositional matrix adjust.
Identities = 219/372 (58%), Positives = 266/372 (71%), Gaps = 26/372 (6%)
Query: 1 MGAAGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNNK 59
MG S LEK +G +QFP E YFGL NFGNTCYCNSVLQALYFC PFRE +L Y K
Sbjct: 12 MGTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKVQQK 71
Query: 60 NLGDAEENLLTCLADLFTQIRAQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNF 119
+ENLLTCLADLF I QKKK GVI PK+F+ RL+K+N+LF +YM QDAHEFLN+
Sbjct: 72 K----KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNY 127
Query: 120 LLNELVDILEKEEAAKSDPESSSPSEKTANG--PTNGLANGVRKEPL-----VTWVHKNF 172
LLN + DIL++E ++ NG NG A EP TWVH+ F
Sbjct: 128 LLNTVADILQEER-----------KQEKQNGRLKNNGTAIATDTEPEQNKIDPTWVHEIF 176
Query: 173 QGILTNETRCLRCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKC 232
QG LTNETRCL CETV+++DE F DLS+D+EQN+SIT CL++FS+TETL +E K++C+ C
Sbjct: 177 QGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNTSITHCLRDFSNTETLCSEYKYYCEMC 236
Query: 233 CSLQEAQKRMKIKKSPHTLVIHLKRFKYIEQLGRYKKLSYRVVFPLELKLSNTAEDA--- 289
CS QEAQKRM++KK P L +HLKRFKY+EQL RY KLSYRVVFPLEL+L NT+ DA
Sbjct: 237 CSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLFNTSGDAVNL 296
Query: 290 DIEYSLFAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMIDESAVQTFFGSAQEYSS 349
D Y L AVVVH GSGPN GHY+++VKSH WL FDD+ VE ID A++ F+G + S
Sbjct: 297 DRMYDLVAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISK 356
Query: 350 NTDHGYILFYES 361
N++ GYILFY+S
Sbjct: 357 NSESGYILFYQS 368
>sp|Q9D9M2|UBP12_MOUSE Ubiquitin carboxyl-terminal hydrolase 12 OS=Mus musculus GN=Usp12
PE=2 SV=2
Length = 370
Score = 434 bits (1115), Expect = e-121, Method: Compositional matrix adjust.
Identities = 215/365 (58%), Positives = 268/365 (73%), Gaps = 16/365 (4%)
Query: 1 MGAAGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNNK 59
MGA S LEK +G +QFP E YFGL NFGNTCYCNSVLQALYFC PFRE++L Y S +
Sbjct: 16 MGANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPR 75
Query: 60 NLGDAEENLLTCLADLFTQIRAQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNF 119
+ENLLTCLADLF I QKKK GVI PK+F+ RL+K+NELF +YM QDAHEFLN+
Sbjct: 76 K----KENLLTCLADLFHSIATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNY 131
Query: 120 LLNELVDILEKEEAAKSDPESSSPSEKTANGPTNGLANGVRKEPLVTWVHKNFQGILTNE 179
LLN + DIL++E + + + NG + N +P TWVH+ FQG LTNE
Sbjct: 132 LLNTIADILQEERKQEKQ------NGRLRNGDVDNEDNNSTPDP--TWVHEIFQGTLTNE 183
Query: 180 TRCLRCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQ 239
TRCL CET++++DE F DLS+D+EQN+SIT CL+ FS+TETL +E K++C++C S QEA
Sbjct: 184 TRCLTCETISSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAH 243
Query: 240 KRMKIKKSPHTLVIHLKRFKYIEQLGRYKKLSYRVVFPLELKLSNTAEDA---DIEYSLF 296
KRMK+KK P L +HLKRFKY++QL RY KLSYRVVFPLEL+L NT+ DA D Y L
Sbjct: 244 KRMKVKKLPLILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYDLV 303
Query: 297 AVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMIDESAVQTFFGSAQEYSSNTDHGYI 356
AVVVH GSGPN GHY+++VKSH+ WL FDD+ VE ID A++ F+G + S N++ GYI
Sbjct: 304 AVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYI 363
Query: 357 LFYES 361
LFY+S
Sbjct: 364 LFYQS 368
>sp|A5D9H7|UBP12_BOVIN Ubiquitin carboxyl-terminal hydrolase 12 OS=Bos taurus GN=USP12
PE=2 SV=1
Length = 369
Score = 431 bits (1107), Expect = e-120, Method: Compositional matrix adjust.
Identities = 214/367 (58%), Positives = 267/367 (72%), Gaps = 21/367 (5%)
Query: 1 MGAAGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNNK 59
MGA S LEK +G +QFP E YFGL NFGNTCYCNSVLQALYFC PFRE++L Y S +
Sbjct: 16 MGANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPR 75
Query: 60 NLGDAEENLLTCLADLFTQIRAQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNF 119
+E+LLTCLADLF I QKKK GVI PK+F+ RL+K+NELF +YM QDAHEFLN+
Sbjct: 76 K----KESLLTCLADLFHSIATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNY 131
Query: 120 LLNELVDILEKEEAAKSDPESSSPSEKTANG--PTNGLANGVRKEPLVTWVHKNFQGILT 177
LLN + DIL++E ++ NG P + + P TWVH+ FQG LT
Sbjct: 132 LLNTIADILQEER-----------KQEKQNGRLPNGNIDSENNSTPDPTWVHEIFQGTLT 180
Query: 178 NETRCLRCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQE 237
NETRCL CET++++DE F DLS+D+EQN+SIT CL+ FS+TETL +E K++C++C S QE
Sbjct: 181 NETRCLTCETISSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQE 240
Query: 238 AQKRMKIKKSPHTLVIHLKRFKYIEQLGRYKKLSYRVVFPLELKLSNTAEDA---DIEYS 294
A KRMK+KK P L +HLKRFKY++QL RY KLSYRVVFPLEL+L NT+ DA D Y
Sbjct: 241 AHKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYD 300
Query: 295 LFAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMIDESAVQTFFGSAQEYSSNTDHG 354
L AVVVH GSGPN GHY+++VKSH+ WL FDD+ VE ID A++ F+G + S N++ G
Sbjct: 301 LVAVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESG 360
Query: 355 YILFYES 361
YILFY+S
Sbjct: 361 YILFYQS 367
>sp|Q52KZ6|UB12A_XENLA Ubiquitin carboxyl-terminal hydrolase 12-A OS=Xenopus laevis
GN=usp12-a PE=2 SV=1
Length = 370
Score = 427 bits (1098), Expect = e-119, Method: Compositional matrix adjust.
Identities = 214/369 (57%), Positives = 268/369 (72%), Gaps = 24/369 (6%)
Query: 1 MGAAGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNNK 59
MGA S LEK +G +QFP E YFGL NFGNTCYCNSVLQALYFC PFRE++L Y S +
Sbjct: 16 MGANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPR 75
Query: 60 NLGDAEENLLTCLADLFTQIRAQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNF 119
+ENLLTCL+DLF I QKKK GVI PK+F+ RL+K+NELF +YM QDAHEFLN+
Sbjct: 76 K----KENLLTCLSDLFHSIATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNY 131
Query: 120 LLNELVDILEKEEAAKSD----PESSSPSEKTANGPTNGLANGVRKEPLVTWVHKNFQGI 175
LLN + DIL++E + P + +E + P +P TWVH+ FQG
Sbjct: 132 LLNTIADILQEERKQEKQNGRIPNGNIDNENNNSAP----------DP--TWVHEIFQGT 179
Query: 176 LTNETRCLRCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSL 235
LTNETRCL CET++++DE F DLS+D+EQN+SIT CL+ FS+TETL +E K++C++C S
Sbjct: 180 LTNETRCLTCETISSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSK 239
Query: 236 QEAQKRMKIKKSPHTLVIHLKRFKYIEQLGRYKKLSYRVVFPLELKLSNTAEDA---DIE 292
QEA KRMK+KK P L +HLKRFKY++QL RY KLSYRVVFPLEL+L NT+ DA D
Sbjct: 240 QEAHKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRM 299
Query: 293 YSLFAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMIDESAVQTFFGSAQEYSSNTD 352
Y L AVVVH GSGPN GHY+++VKSH+ WL FDD+ VE ID A++ F+G + S N++
Sbjct: 300 YDLVAVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSE 359
Query: 353 HGYILFYES 361
GYILFY+S
Sbjct: 360 SGYILFYQS 368
>sp|Q5M981|UB12B_XENLA Ubiquitin carboxyl-terminal hydrolase 12-B OS=Xenopus laevis
GN=usp12-b PE=2 SV=2
Length = 370
Score = 427 bits (1097), Expect = e-119, Method: Compositional matrix adjust.
Identities = 213/365 (58%), Positives = 263/365 (72%), Gaps = 16/365 (4%)
Query: 1 MGAAGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNNK 59
MGA S LEK +G +QFP E YFGL NFGNTCYCNSVLQALYFC PFRE++L Y S +
Sbjct: 16 MGANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPR 75
Query: 60 NLGDAEENLLTCLADLFTQIRAQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNF 119
+ENLLTCL+DLF I QKKK GVI PK+F+ RL+K+NELF +YM QDAHEFLN+
Sbjct: 76 K----KENLLTCLSDLFHSIATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNY 131
Query: 120 LLNELVDILEKEEAAKSDPESSSPSEKTANGPTNGLANGVRKEPLVTWVHKNFQGILTNE 179
LLN + DIL+ EE + P+ P TWVH+ FQG LTNE
Sbjct: 132 LLNTIADILQ-EERKQEKQNGRIPNGNID-------NENNNNTPDPTWVHEIFQGTLTNE 183
Query: 180 TRCLRCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQ 239
TRCL CET++++DE F DLS+D+EQN+SIT CL+ FS+TETL +E K++C++C S QEA
Sbjct: 184 TRCLTCETISSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAH 243
Query: 240 KRMKIKKSPHTLVIHLKRFKYIEQLGRYKKLSYRVVFPLELKLSNTAEDA---DIEYSLF 296
KRMK+KK P L +HLKRFKY++QL RY KLSYRVVFPLEL+L NT+ DA D Y L
Sbjct: 244 KRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYDLV 303
Query: 297 AVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMIDESAVQTFFGSAQEYSSNTDHGYI 356
AVVVH GSGPN GHY+++VKSH+ WL FDD+ VE ID A++ F+G + S N++ GYI
Sbjct: 304 AVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYI 363
Query: 357 LFYES 361
LFY+S
Sbjct: 364 LFYQS 368
>sp|O75317|UBP12_HUMAN Ubiquitin carboxyl-terminal hydrolase 12 OS=Homo sapiens GN=USP12
PE=1 SV=2
Length = 370
Score = 426 bits (1095), Expect = e-118, Method: Compositional matrix adjust.
Identities = 215/365 (58%), Positives = 265/365 (72%), Gaps = 16/365 (4%)
Query: 1 MGAAGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNNK 59
MGA S LEK +G +QFP E YFGL NFGNTCYCNSVLQALYFC PFRE++L Y S +
Sbjct: 16 MGANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPR 75
Query: 60 NLGDAEENLLTCLADLFTQIRAQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNF 119
+E+LLTCLADLF I QKKK GVI PK+F+ RL+K+NELF +YM QDAHEFLN+
Sbjct: 76 K----KESLLTCLADLFHSIATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNY 131
Query: 120 LLNELVDILEKEEAAKSDPESSSPSEKTANGPTNGLANGVRKEPLVTWVHKNFQGILTNE 179
LLN + DIL+ EE + P+ N N P TWVH+ FQG LTNE
Sbjct: 132 LLNTIADILQ-EERKQEKQNGRLPNGNIDNENNNS-------TPDPTWVHEIFQGTLTNE 183
Query: 180 TRCLRCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQ 239
TRCL CET++++DE F DLS+D+EQN+SIT CL+ FS+TETL +E K++C++C S QEA
Sbjct: 184 TRCLTCETISSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAH 243
Query: 240 KRMKIKKSPHTLVIHLKRFKYIEQLGRYKKLSYRVVFPLELKLSNTAEDA---DIEYSLF 296
KRMK+KK P L +HLKRFKY++QL RY KLSYRVVFPLEL+L NT+ DA D Y L
Sbjct: 244 KRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYDLV 303
Query: 297 AVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMIDESAVQTFFGSAQEYSSNTDHGYI 356
AVVVH GSGPN GHY+++VKSH+ WL FDD+ VE ID A++ F+G + S N++ GYI
Sbjct: 304 AVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYI 363
Query: 357 LFYES 361
LFY+S
Sbjct: 364 LFYQS 368
>sp|P34547|UBPX_CAEEL Probable ubiquitin carboxyl-terminal hydrolase 46 OS=Caenorhabditis
elegans GN=usp-46 PE=3 SV=3
Length = 426
Score = 384 bits (986), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/405 (49%), Positives = 267/405 (65%), Gaps = 44/405 (10%)
Query: 1 MGAAGS-KLEKALGDQFP---EGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLDYYS 56
MGA GS +LEK + E Y+GL NFGNTCYCNSV+QAL+FC PFRE++L+Y
Sbjct: 1 MGATGSSQLEKEISTTESVNNANEHYYGLVNFGNTCYCNSVIQALFFCRPFREKVLNYKQ 60
Query: 57 NNKNLGDAEENLLTCLADLFTQIRAQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEF 116
K G +++NL+TCLADLF I +QK++ G IAPKRF+ +LKK+NELF +YM QDAHEF
Sbjct: 61 TLKKSGASKDNLVTCLADLFHSIASQKRRVGTIAPKRFITKLKKENELFDNYMQQDAHEF 120
Query: 117 LNFLLNELVDILEKEEAAKSDPESSSPSEKTANGPTN------GLA----------NG-- 158
N+L+N + + L +E+ A+ + S + K N N GL NG
Sbjct: 121 FNYLINTISETLIQEKIAEREKASRHGTLKKGNVTVNLAPATAGLPRSDEKGTSERNGGI 180
Query: 159 -------VRKEPLVTWVHKNFQGILTNETRCLRCETVTARDETFFDLSLDIEQNSSITSC 211
+ K TW+H+ FQGILTNETRCL CETV+++DE F DLS+D+EQN+SI+ C
Sbjct: 181 TVEGNEFLNKSDTTTWIHEIFQGILTNETRCLSCETVSSKDEDFLDLSIDVEQNTSISHC 240
Query: 212 LKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKSPHTLVIHLKRFKYIEQLGRYKKLS 271
L+ FS TETL + K+FC+ C S QEAQKRM+IKK P L +HLKRFK++E L R+ KLS
Sbjct: 241 LRVFSETETLCGDQKYFCETCSSKQEAQKRMRIKKPPQLLALHLKRFKFVEPLNRHTKLS 300
Query: 272 YRVVFPLELKLSNTAEDA---DIEYSLFAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDEN 328
YRVVFPLEL+L N ++DA D Y L A VVH G+ PN GHY++LVKS++ WL FDD+
Sbjct: 301 YRVVFPLELRLFNVSDDAEYGDRMYDLVATVVHCGATPNRGHYITLVKSNSFWLVFDDDI 360
Query: 329 VEMIDESAVQTFFGSAQEYS------------SNTDHGYILFYES 361
VE ++ S+++ F G + + + N++ YILFY++
Sbjct: 361 VEKLEVSSMEEFSGMSTDANIQMPPGNQSAPQKNSESAYILFYQA 405
>sp|Q2UUG8|CREB_ASPOR Probable ubiquitin carboxyl-terminal hydrolase creB OS=Aspergillus
oryzae (strain ATCC 42149 / RIB 40) GN=creB PE=3 SV=2
Length = 754
Score = 305 bits (781), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 151/314 (48%), Positives = 211/314 (67%), Gaps = 9/314 (2%)
Query: 51 LLDYYSNNKNLGDAEENLLTCLADLFTQIRAQKKKTGVIAPKRFVQRLKKQNELFRSYMH 110
LL+ +N + G E+L T L DLF + A + + G+I P+ F+ L++++E+FR+ MH
Sbjct: 157 LLETKNNATSYG-MSESLFTSLKDLFESVVASQSRIGIIRPQHFLDVLRREHEMFRTAMH 215
Query: 111 QDAHEFLNFLLNELVDILEKEEAAKSDPESSSPSEKTANGPTNGLANGVRKEPLVTWVHK 170
QDAHEFLN LLNE+V +E E + + +PE S P ++A+ ++G + WVH+
Sbjct: 216 QDAHEFLNLLLNEVVANVEAEASKQPEPERSLPPAESADSTELSGSSGSKTPNTTRWVHE 275
Query: 171 NFQGILTNETRCLRCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCD 230
F+G LT+ET+CL CE V+ RDE F DLS+D+EQ+SS+TSCL+ FS+ E L +KF CD
Sbjct: 276 LFEGTLTSETQCLTCEKVSQRDEVFLDLSVDLEQHSSVTSCLRKFSAEEMLCERNKFHCD 335
Query: 231 KCCSLQEAQKRMKIKKSPHTLVIHLKRFKYIEQLGRYKKLSYRVVFPLELKLSNT---AE 287
C LQEA+KRMKIK+ P L +HLKRFKY E L R +KL +RVV+P L+L NT AE
Sbjct: 336 NCGGLQEAEKRMKIKRLPRILALHLKRFKYTEDLQRLQKLFHRVVYPYHLRLFNTTDDAE 395
Query: 288 DADIEYSLFAVVVHVGSGPNHGHYVSLVKSHNH-WLFFDDENVEMIDESAVQTFFGSAQE 346
D D Y L+AVVVH+G GP HGHYV+++K+ + WL FDDE VE +D++ V+ FFG
Sbjct: 396 DPDRLYELYAVVVHIGGGPYHGHYVAIIKTQDRGWLLFDDEMVEPVDKNYVRNFFGDRPG 455
Query: 347 YSSNTDHGYILFYE 360
+ Y+LFY+
Sbjct: 456 LAC----AYVLFYQ 465
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 32/35 (91%)
Query: 20 ERYFGLENFGNTCYCNSVLQALYFCVPFREQLLDY 54
+++FG+EN+GNTCYCNS+LQ LY+ VPFRE +++Y
Sbjct: 51 DKFFGMENYGNTCYCNSILQCLYYSVPFREAVVNY 85
>sp|B8NSV5|CREB_ASPFN Probable ubiquitin carboxyl-terminal hydrolase creB OS=Aspergillus
flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 /
JCM 12722 / SRRC 167) GN=creB PE=3 SV=1
Length = 755
Score = 305 bits (781), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 151/314 (48%), Positives = 211/314 (67%), Gaps = 9/314 (2%)
Query: 51 LLDYYSNNKNLGDAEENLLTCLADLFTQIRAQKKKTGVIAPKRFVQRLKKQNELFRSYMH 110
LL+ +N + G E+L T L DLF + A + + G+I P+ F+ L++++E+FR+ MH
Sbjct: 158 LLETKNNATSYG-MSESLFTSLKDLFESVVASQSRIGIIRPQHFLDVLRREHEMFRTAMH 216
Query: 111 QDAHEFLNFLLNELVDILEKEEAAKSDPESSSPSEKTANGPTNGLANGVRKEPLVTWVHK 170
QDAHEFLN LLNE+V +E E + + +PE S P ++A+ ++G + WVH+
Sbjct: 217 QDAHEFLNLLLNEVVANVEAEASKQPEPERSLPPAESADSTELSGSSGSKTPNTTRWVHE 276
Query: 171 NFQGILTNETRCLRCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCD 230
F+G LT+ET+CL CE V+ RDE F DLS+D+EQ+SS+TSCL+ FS+ E L +KF CD
Sbjct: 277 LFEGTLTSETQCLTCEKVSQRDEVFLDLSVDLEQHSSVTSCLRKFSAEEMLCERNKFHCD 336
Query: 231 KCCSLQEAQKRMKIKKSPHTLVIHLKRFKYIEQLGRYKKLSYRVVFPLELKLSNT---AE 287
C LQEA+KRMKIK+ P L +HLKRFKY E L R +KL +RVV+P L+L NT AE
Sbjct: 337 NCGGLQEAEKRMKIKRLPRILALHLKRFKYTEDLQRLQKLFHRVVYPYHLRLFNTTDDAE 396
Query: 288 DADIEYSLFAVVVHVGSGPNHGHYVSLVKSHNH-WLFFDDENVEMIDESAVQTFFGSAQE 346
D D Y L+AVVVH+G GP HGHYV+++K+ + WL FDDE VE +D++ V+ FFG
Sbjct: 397 DPDRLYELYAVVVHIGGGPYHGHYVAIIKTQDRGWLLFDDEMVEPVDKNYVRNFFGDRPG 456
Query: 347 YSSNTDHGYILFYE 360
+ Y+LFY+
Sbjct: 457 LAC----AYVLFYQ 466
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 32/35 (91%)
Query: 20 ERYFGLENFGNTCYCNSVLQALYFCVPFREQLLDY 54
+++FG+EN+GNTCYCNS+LQ LY+ VPFRE +++Y
Sbjct: 52 DKFFGMENYGNTCYCNSILQCLYYSVPFREAVVNY 86
>sp|Q4WQI1|CREB_ASPFU Probable ubiquitin carboxyl-terminal hydrolase creB OS=Neosartorya
fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 /
FGSC A1100) GN=creB PE=3 SV=3
Length = 775
Score = 302 bits (773), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 149/314 (47%), Positives = 210/314 (66%), Gaps = 9/314 (2%)
Query: 51 LLDYYSNNKNLGDAEENLLTCLADLFTQIRAQKKKTGVIAPKRFVQRLKKQNELFRSYMH 110
LL+ +N + G E+L T L D+F + + + G+I P++F++ L++ +E+FR+ MH
Sbjct: 158 LLETQNNASSYG-MSESLFTSLKDIFESVVGSQSRIGIIRPQQFLEVLRRDHEMFRTAMH 216
Query: 111 QDAHEFLNFLLNELVDILEKEEAAKSDPESSSPSEKTANGPTNGLANGVRKEPLVTWVHK 170
QDAHEFLN LLNE+V +E E + + E S P+ +TA+ + G + WVH+
Sbjct: 217 QDAHEFLNLLLNEVVANVEAEASKQPPIEKSLPAPETADSVDQSSSTGSKTPNTTRWVHE 276
Query: 171 NFQGILTNETRCLRCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCD 230
F+G+LT+ET+CL CE V+ RDE F DLS+D+EQ+SS+TSCL+ FS+ E L +KF CD
Sbjct: 277 LFEGLLTSETQCLTCEKVSQRDEVFLDLSVDLEQHSSVTSCLRKFSAEEMLCERNKFHCD 336
Query: 231 KCCSLQEAQKRMKIKKSPHTLVIHLKRFKYIEQLGRYKKLSYRVVFPLELKLSNT---AE 287
C LQEA+KRMKIK+ P L +HLKRFKY E L R +KL +RVV+P L+L NT AE
Sbjct: 337 NCGGLQEAEKRMKIKRLPRILALHLKRFKYTEDLQRLQKLFHRVVYPYHLRLFNTTDDAE 396
Query: 288 DADIEYSLFAVVVHVGSGPNHGHYVSLVKSHNH-WLFFDDENVEMIDESAVQTFFGSAQE 346
D D Y L+AVVVH+G GP HGHYV+++K+ + WL FDDE VE +D++ V+ FFG
Sbjct: 397 DPDRLYELYAVVVHIGGGPYHGHYVAIIKTEDRGWLLFDDEMVEPVDKNYVKNFFGDKPG 456
Query: 347 YSSNTDHGYILFYE 360
+ Y+LFY+
Sbjct: 457 LAC----AYVLFYQ 466
Score = 65.9 bits (159), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 39/53 (73%), Gaps = 4/53 (7%)
Query: 6 SKLEKALGDQFPEGE----RYFGLENFGNTCYCNSVLQALYFCVPFREQLLDY 54
+ LEK L D P E +++G+EN+GNTCYCNS+LQ LY+ VPFRE +++Y
Sbjct: 34 TPLEKRLLDMGPIREDGSDKFYGMENYGNTCYCNSILQCLYYSVPFREAVINY 86
>sp|B0Y4P5|CREB_ASPFC Probable ubiquitin carboxyl-terminal hydrolase creB OS=Neosartorya
fumigata (strain CEA10 / CBS 144.89 / FGSC A1163)
GN=creB PE=3 SV=1
Length = 767
Score = 302 bits (773), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 149/314 (47%), Positives = 210/314 (66%), Gaps = 9/314 (2%)
Query: 51 LLDYYSNNKNLGDAEENLLTCLADLFTQIRAQKKKTGVIAPKRFVQRLKKQNELFRSYMH 110
LL+ +N + G E+L T L D+F + + + G+I P++F++ L++ +E+FR+ MH
Sbjct: 152 LLETQNNASSYG-MSESLFTSLKDIFESVVGSQSRIGIIRPQQFLEVLRRDHEMFRTAMH 210
Query: 111 QDAHEFLNFLLNELVDILEKEEAAKSDPESSSPSEKTANGPTNGLANGVRKEPLVTWVHK 170
QDAHEFLN LLNE+V +E E + + E S P+ +TA+ + G + WVH+
Sbjct: 211 QDAHEFLNLLLNEVVANVEAEASKQPPIEKSLPAPETADSVDQSSSTGSKTPNTTRWVHE 270
Query: 171 NFQGILTNETRCLRCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCD 230
F+G+LT+ET+CL CE V+ RDE F DLS+D+EQ+SS+TSCL+ FS+ E L +KF CD
Sbjct: 271 LFEGLLTSETQCLTCEKVSQRDEVFLDLSVDLEQHSSVTSCLRKFSAEEMLCERNKFHCD 330
Query: 231 KCCSLQEAQKRMKIKKSPHTLVIHLKRFKYIEQLGRYKKLSYRVVFPLELKLSNT---AE 287
C LQEA+KRMKIK+ P L +HLKRFKY E L R +KL +RVV+P L+L NT AE
Sbjct: 331 NCGGLQEAEKRMKIKRLPRILALHLKRFKYTEDLQRLQKLFHRVVYPYHLRLFNTTDDAE 390
Query: 288 DADIEYSLFAVVVHVGSGPNHGHYVSLVKSHNH-WLFFDDENVEMIDESAVQTFFGSAQE 346
D D Y L+AVVVH+G GP HGHYV+++K+ + WL FDDE VE +D++ V+ FFG
Sbjct: 391 DPDRLYELYAVVVHIGGGPYHGHYVAIIKTEDRGWLLFDDEMVEPVDKNYVKNFFGDKPG 450
Query: 347 YSSNTDHGYILFYE 360
+ Y+LFY+
Sbjct: 451 LAC----AYVLFYQ 460
Score = 65.9 bits (159), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 39/53 (73%), Gaps = 4/53 (7%)
Query: 6 SKLEKALGDQFPEGE----RYFGLENFGNTCYCNSVLQALYFCVPFREQLLDY 54
+ LEK L D P E +++G+EN+GNTCYCNS+LQ LY+ VPFRE +++Y
Sbjct: 28 TPLEKRLLDMGPIREDGSDKFYGMENYGNTCYCNSILQCLYYSVPFREAVINY 80
>sp|A1CW53|CREB_NEOFI Probable ubiquitin carboxyl-terminal hydrolase creB OS=Neosartorya
fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 /
NRRL 181) GN=creB PE=3 SV=2
Length = 761
Score = 301 bits (770), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 149/314 (47%), Positives = 210/314 (66%), Gaps = 9/314 (2%)
Query: 51 LLDYYSNNKNLGDAEENLLTCLADLFTQIRAQKKKTGVIAPKRFVQRLKKQNELFRSYMH 110
LL+ +N + G E+L T L D+F + + + G+I P++F++ L++ +E+FR+ MH
Sbjct: 158 LLETQNNAASYG-MSESLFTSLKDIFESVVGSQSRIGIIRPQQFLEVLRRDHEMFRTAMH 216
Query: 111 QDAHEFLNFLLNELVDILEKEEAAKSDPESSSPSEKTANGPTNGLANGVRKEPLVTWVHK 170
QDAHEFLN LLNE+V +E E + + E S P+ +TA+ + G + WVH+
Sbjct: 217 QDAHEFLNLLLNEVVANVEAEASKQPLMEKSLPAPETADSVDQSSSTGSKTPNTTRWVHE 276
Query: 171 NFQGILTNETRCLRCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCD 230
F+G+LT+ET+CL CE V+ RDE F DLS+D+EQ+SS+TSCL+ FS+ E L +KF CD
Sbjct: 277 LFEGLLTSETQCLTCEKVSQRDEVFLDLSVDLEQHSSVTSCLRKFSAEEMLCERNKFHCD 336
Query: 231 KCCSLQEAQKRMKIKKSPHTLVIHLKRFKYIEQLGRYKKLSYRVVFPLELKLSNT---AE 287
C LQEA+KRMKIK+ P L +HLKRFKY E L R +KL +RVV+P L+L NT AE
Sbjct: 337 NCGGLQEAEKRMKIKRLPRILALHLKRFKYTEDLQRLQKLFHRVVYPYHLRLFNTTDDAE 396
Query: 288 DADIEYSLFAVVVHVGSGPNHGHYVSLVKSHNH-WLFFDDENVEMIDESAVQTFFGSAQE 346
D D Y L+AVVVH+G GP HGHYV+++K+ + WL FDDE VE +D++ V+ FFG
Sbjct: 397 DPDRLYELYAVVVHIGGGPYHGHYVAIIKTEDRGWLLFDDEMVEPVDKNYVKNFFGDKPG 456
Query: 347 YSSNTDHGYILFYE 360
+ Y+LFY+
Sbjct: 457 LAC----AYVLFYQ 466
Score = 65.5 bits (158), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 39/53 (73%), Gaps = 4/53 (7%)
Query: 6 SKLEKALGDQFPEGE----RYFGLENFGNTCYCNSVLQALYFCVPFREQLLDY 54
+ LEK L D P E +++G+EN+GNTCYCNS+LQ LY+ VPFRE +++Y
Sbjct: 34 TPLEKRLLDMGPIREDGSDKFYGMENYGNTCYCNSILQCLYYSVPFREAVINY 86
>sp|Q0CT11|CREB_ASPTN Probable ubiquitin carboxyl-terminal hydrolase creB OS=Aspergillus
terreus (strain NIH 2624 / FGSC A1156) GN=creB PE=3 SV=2
Length = 768
Score = 295 bits (756), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 147/314 (46%), Positives = 207/314 (65%), Gaps = 9/314 (2%)
Query: 51 LLDYYSNNKNLGDAEENLLTCLADLFTQIRAQKKKTGVIAPKRFVQRLKKQNELFRSYMH 110
LL+ +N + G E+L T L DLF + + + G++ P+ F+ L++++E+FR+ MH
Sbjct: 158 LLETKNNAPSYG-MSESLFTSLKDLFESVVGSQSRIGIVRPQHFLDVLRREHEMFRTAMH 216
Query: 111 QDAHEFLNFLLNELVDILEKEEAAKSDPESSSPSEKTANGPTNGLANGVRKEPLVTWVHK 170
QDAHEFLN LLNE+V +E E + E S P +++ + ++G + WVH+
Sbjct: 217 QDAHEFLNLLLNEVVANVEAEALKQPSLERSLPPAESSESVEHSGSSGSKTPNTTRWVHE 276
Query: 171 NFQGILTNETRCLRCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCD 230
F+G LT+ET+CL CE V+ RDE F DLS+D+EQ+SS+TSCL+ FS+ E L +KF CD
Sbjct: 277 LFEGTLTSETQCLTCEKVSQRDEVFLDLSVDLEQHSSVTSCLRKFSAEEMLCERNKFHCD 336
Query: 231 KCCSLQEAQKRMKIKKSPHTLVIHLKRFKYIEQLGRYKKLSYRVVFPLELKLSNT---AE 287
C LQEA+KRMKIK+ P L +HLKRFKY E L R +KL +RVV+P L+L NT AE
Sbjct: 337 NCGGLQEAEKRMKIKRLPRILALHLKRFKYTEDLQRLQKLFHRVVYPYHLRLFNTTDDAE 396
Query: 288 DADIEYSLFAVVVHVGSGPNHGHYVSLVKSHNH-WLFFDDENVEMIDESAVQTFFGSAQE 346
D D Y L+AVVVH+G GP HGHYV+++K+ + WL FDDE VE +D++ V+ FFG
Sbjct: 397 DPDRLYELYAVVVHIGGGPYHGHYVAIIKTQDRGWLLFDDEMVEPVDKNYVRNFFGDKPG 456
Query: 347 YSSNTDHGYILFYE 360
+ Y+LFY+
Sbjct: 457 LAC----AYVLFYQ 466
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 32/35 (91%)
Query: 20 ERYFGLENFGNTCYCNSVLQALYFCVPFREQLLDY 54
+++FG+EN+GNTCYCNS+LQ LY+ VPFRE +++Y
Sbjct: 52 DKFFGMENYGNTCYCNSILQCLYYSVPFREAVINY 86
>sp|A2Q9N1|CREB_ASPNC Probable ubiquitin carboxyl-terminal hydrolase creB OS=Aspergillus
niger (strain CBS 513.88 / FGSC A1513) GN=creB PE=3 SV=2
Length = 758
Score = 295 bits (754), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 151/314 (48%), Positives = 207/314 (65%), Gaps = 11/314 (3%)
Query: 51 LLDYYSNNKNLGDAEENLLTCLADLFTQIRAQKKKTGVIAPKRFVQRLKKQNELFRSYMH 110
LL+ +N + G E+L T L D+F + A + + G++ P+ F+ L+++NE+FRS MH
Sbjct: 160 LLETKNNAGSYG-MSESLFTSLKDIFESVVASQSRIGIVRPQHFLDVLRRENEMFRSAMH 218
Query: 111 QDAHEFLNFLLNELVDILEKEEAAKSDPESSSPSEKTANGPTNGLANGVRKEPLVTWVHK 170
QDAHEFLN +LNE+V +E E A P S P T + +++G + WVH+
Sbjct: 219 QDAHEFLNLVLNEVVANVEAE--AMKQPIPSLPPADTTDSSRQSISSGSKTPNTTRWVHE 276
Query: 171 NFQGILTNETRCLRCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCD 230
F+G LT+ET+CL CE V+ RDE F DLS+D+EQ+SS+TSCL+ FS+ E L +KF CD
Sbjct: 277 LFEGTLTSETQCLTCENVSQRDEIFLDLSVDLEQHSSVTSCLRKFSAEEMLCERNKFHCD 336
Query: 231 KCCSLQEAQKRMKIKKSPHTLVIHLKRFKYIEQLGRYKKLSYRVVFPLELKLSNT---AE 287
C LQEA+KRMKIK+ P L +HLKRFKY E L R +KL +RVV+P L+L NT AE
Sbjct: 337 NCGGLQEAEKRMKIKRLPRILALHLKRFKYTEDLQRLQKLFHRVVYPYHLRLFNTTDDAE 396
Query: 288 DADIEYSLFAVVVHVGSGPNHGHYVSLVKSHNH-WLFFDDENVEMIDESAVQTFFGSAQE 346
D D Y L+AVVVH+G GP HGHYVS++K+ + WL FDDE VE +D++ V+ FFG
Sbjct: 397 DPDRLYELYAVVVHIGGGPYHGHYVSIIKTQDRGWLLFDDEMVEPVDKNYVRNFFGDKPG 456
Query: 347 YSSNTDHGYILFYE 360
+ Y+LFY+
Sbjct: 457 LAC----AYVLFYQ 466
Score = 65.1 bits (157), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 32/35 (91%)
Query: 20 ERYFGLENFGNTCYCNSVLQALYFCVPFREQLLDY 54
+++FG+EN+GNTCYCNS+LQ LY+ VPFRE +L+Y
Sbjct: 54 DKFFGMENYGNTCYCNSILQCLYYSVPFREAVLNY 88
>sp|Q96V54|CREB_EMENI Ubiquitin carboxyl-terminal hydrolase creB OS=Emericella nidulans
(strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 /
M139) GN=creB PE=1 SV=1
Length = 766
Score = 293 bits (751), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 150/314 (47%), Positives = 209/314 (66%), Gaps = 11/314 (3%)
Query: 51 LLDYYSNNKNLGDAEENLLTCLADLFTQIRAQKKKTGVIAPKRFVQRLKKQNELFRSYMH 110
LL+ N+ + G E+L + L D+F I + + G+I P+ F++ L+++NE+FR+ MH
Sbjct: 158 LLETTDNSVSYG-IPESLFSSLKDMFESIVGSQSRIGIIRPQHFLEVLRRENEMFRTAMH 216
Query: 111 QDAHEFLNFLLNELVDILEKEEAAKSDPESSSPSEKTANGPTNGLANGVRKEPLVTWVHK 170
QDAHEFLN LLNE+V ++ E+AA ES P+ ++ ++G R WVH+
Sbjct: 217 QDAHEFLNLLLNEVV--VDVEKAAAKLLESPQPASDVSDSVIPSSSSGSRTPNTTRWVHE 274
Query: 171 NFQGILTNETRCLRCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCD 230
F+G+LT+ET+CL CE + RDE F DLS+D+EQ+SS+TSCL+ FS+ E L +KF CD
Sbjct: 275 LFEGLLTSETQCLTCEKASQRDEVFLDLSVDLEQHSSVTSCLRKFSAEEMLCERNKFHCD 334
Query: 231 KCCSLQEAQKRMKIKKSPHTLVIHLKRFKYIEQLGRYKKLSYRVVFPLELKLSNT---AE 287
C LQEA+KRMKIK+ P L +HLKRFKY E L R +KL +RVV+P L+L NT AE
Sbjct: 335 NCGGLQEAEKRMKIKRLPRILALHLKRFKYTEDLQRLQKLFHRVVYPYHLRLFNTTDDAE 394
Query: 288 DADIEYSLFAVVVHVGSGPNHGHYVSLVKSHNH-WLFFDDENVEMIDESAVQTFFGSAQE 346
D D Y L+AVVVH+G GP HGHYVS++K+ + WL FDDE VE +D++ V+ FFG
Sbjct: 395 DPDRLYELYAVVVHIGGGPYHGHYVSIIKTQDRGWLLFDDEMVEPVDKNYVRNFFGDKPG 454
Query: 347 YSSNTDHGYILFYE 360
+ Y+LFY+
Sbjct: 455 LAC----AYVLFYQ 464
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 39/53 (73%), Gaps = 4/53 (7%)
Query: 6 SKLEKALGDQFP----EGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLDY 54
+ LEK L + P ++++G+ENFGNTCYCNS+LQ LY+ VPFRE +L+Y
Sbjct: 34 TPLEKMLTELGPIRGDGSDKFYGMENFGNTCYCNSILQCLYYSVPFREAVLNY 86
>sp|A1CIL1|CREB_ASPCL Probable ubiquitin carboxyl-terminal hydrolase creB OS=Aspergillus
clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC
3887 / NRRL 1) GN=creB PE=3 SV=2
Length = 760
Score = 291 bits (744), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 149/317 (47%), Positives = 206/317 (64%), Gaps = 14/317 (4%)
Query: 51 LLDYYSNNKNLGDAEENLLTCLADLFTQIRAQKKKTGVIAPKRFVQRLKKQNELFRSYMH 110
LL+ +N + G E+L T L D+F + + + G++ P++F+ L++ +E+FR+ MH
Sbjct: 158 LLEAQNNATSYG-MSESLFTSLKDIFESVVGSQSRIGIVRPQQFLDVLRRDHEMFRTAMH 216
Query: 111 QDAHEFLNFLLNELVDILEKEEAAKSDP---ESSSPSEKTANGPTNGLANGVRKEPLVTW 167
QDAHEFLN LLNE+V +E E A P E S P+ A ++G + W
Sbjct: 217 QDAHEFLNLLLNEVVANVEAE--ASKQPAAIEKSLPAPDHAETVDQSASSGSKTPNTTRW 274
Query: 168 VHKNFQGILTNETRCLRCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKF 227
VH+ F+G LT+ET+CL CE V+ RDE F DLS+D+EQ+SS+TSCL+ FS+ E L +KF
Sbjct: 275 VHELFEGTLTSETQCLTCEKVSQRDEIFLDLSVDLEQHSSVTSCLRKFSAEEMLCERNKF 334
Query: 228 FCDKCCSLQEAQKRMKIKKSPHTLVIHLKRFKYIEQLGRYKKLSYRVVFPLELKLSNT-- 285
CD C LQEA+KRMKIK+ P L +HLKRFKY E L R +KL +RVV+P L+L NT
Sbjct: 335 HCDNCGGLQEAEKRMKIKRLPRILALHLKRFKYTEDLQRLQKLFHRVVYPYHLRLFNTTD 394
Query: 286 -AEDADIEYSLFAVVVHVGSGPNHGHYVSLVKSHNH-WLFFDDENVEMIDESAVQTFFGS 343
AED D Y L+AVVVH+G GP HGHYV+++K+ + WL FDDE VE +D++ V+ FFG
Sbjct: 395 DAEDPDRLYELYAVVVHIGGGPYHGHYVAIIKTEDRGWLLFDDELVEPVDKNYVRNFFGD 454
Query: 344 AQEYSSNTDHGYILFYE 360
+ Y+LFY+
Sbjct: 455 KPGLAC----AYVLFYQ 467
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 32/35 (91%)
Query: 20 ERYFGLENFGNTCYCNSVLQALYFCVPFREQLLDY 54
++++G+EN+GNTCYCNS+LQ LY+ VPFRE +++Y
Sbjct: 52 DKFYGMENYGNTCYCNSILQCLYYSVPFREAVINY 86
>sp|Q9P7V9|UBP9_SCHPO Probable ubiquitin carboxyl-terminal hydrolase 9
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=ubp9 PE=1 SV=1
Length = 585
Score = 261 bits (667), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 135/299 (45%), Positives = 190/299 (63%), Gaps = 32/299 (10%)
Query: 65 EENLLTCLADLFTQIRAQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNEL 124
+EN+ TCL DL+ + + G+ +P+RF+Q L++ NE FRS QDAHEF NFLLN +
Sbjct: 151 KENIYTCLKDLYCSVSCCDCRYGICSPERFIQVLRRDNEAFRSTQQQDAHEFFNFLLNSV 210
Query: 125 VDILEKEEAAKSDPESSSPSEKTANGPTNGLANGVRKEPLVTWVHKNFQGILTNETRCLR 184
+ L++ SD P WVH F+G LT+ET+CL
Sbjct: 211 TETLDEYYGNHSD----------VMHPK--------------WVHSLFEGTLTSETKCLT 246
Query: 185 CETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKI 244
CE +T+RDE+F DLS+DIE ++S+TSCL++FS++E L++++KF CD C SLQEA+KRMKI
Sbjct: 247 CENITSRDESFLDLSIDIENHTSVTSCLRSFSASEMLSSKNKFHCDVCKSLQEAEKRMKI 306
Query: 245 KKSPHTLVIHLKRFKYIEQLGRYKKLSYRVVFPLELKLSNTAEDADIE---YSLFAVVVH 301
KK P L +HLKRFKY E + KL Y +VF E++L T EDA+ Y L +V+VH
Sbjct: 307 KKLPKILSLHLKRFKYNETQEGHDKLFYTIVFTNEMRLFTTTEDAENAERMYYLSSVIVH 366
Query: 302 VGSGPNHGHYVSLVKSHNH-WLFFDDENVEMIDESAVQTFFGSAQEYSSNTDHGYILFY 359
VG GP+ GHYVS+V++ + W+ FDDENV ++E+ +Q FFG ++ Y+LFY
Sbjct: 367 VGGGPHRGHYVSIVRTKTYGWVLFDDENVTPVNENYLQRFFGDQPGQAT----AYVLFY 421
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 26/35 (74%)
Query: 20 ERYFGLENFGNTCYCNSVLQALYFCVPFREQLLDY 54
+R++GL N+GNTCY +SVL +LY PFR+ L Y
Sbjct: 38 DRFYGLTNYGNTCYVSSVLVSLYHLKPFRDSLNSY 72
>sp|P38187|UBP13_YEAST Ubiquitin carboxyl-terminal hydrolase 13 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=UBP13 PE=1
SV=3
Length = 747
Score = 222 bits (565), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 123/307 (40%), Positives = 174/307 (56%), Gaps = 27/307 (8%)
Query: 62 GDAEENLLTCLADLFTQIRAQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLL 121
G + L + L D+F I TGV++P FV LK++N LF + MHQDAHEF NFLL
Sbjct: 383 GSDKATLYSSLRDIFECITENTYLTGVVSPSSFVDVLKRENVLFNTTMHQDAHEFFNFLL 442
Query: 122 NELVDILEKE--EAAKSDPESSSPSEKTANGPTNGLANGVRKEPLVTWVHKNFQGILTNE 179
NEL + +E+E + A SD S S K+ N ++ FQG LTN+
Sbjct: 443 NELSEYIERENKKIAASDINSDSEPSKSKN-----------------FISDLFQGTLTNQ 485
Query: 180 TRCLRCETVTARDETFFDLSLDIE--QNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQE 237
+CL C+ +T+RDE F D ++++ + + I LK++ E LN +KF+CD+CC LQE
Sbjct: 486 IKCLTCDNITSRDEPFLDFPIEVQGDEETDIQEILKSYHQREMLNGSNKFYCDECCGLQE 545
Query: 238 AQKRMKIKKSPHTLVIHLKRFKYIEQLGRYKKLSYRVVFPLELKLSNTAEDADIE-YSLF 296
A++ + +K+ P TL +HLKRFKY E+ KL + +PL L + ++ + Y L
Sbjct: 546 AERLVGLKQLPDTLTLHLKRFKYSEKQNCNIKLFNNIHYPLTLNVCSSINSKVCQKYELA 605
Query: 297 AVVVHVGSGPNHGHYVSLVKSHN-HWLFFDDENVEMIDESAVQTFFGSAQEYSSNTDHGY 355
+VVH+G GP HGHYVSL K WL FDDE VE + E V F G S N Y
Sbjct: 606 GIVVHMGGGPQHGHYVSLCKHEKFGWLLFDDETVEAVKEETVLEFTGE----SPNMATAY 661
Query: 356 ILFYESL 362
+LFY+++
Sbjct: 662 VLFYKAM 668
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 2 GAAGSKLEKALGDQFPEGE---RYFGLENFGNTCYCNSVLQALYFCVPFREQLLDY 54
G L + D P G+ + FG ENFGNTCYCNSVLQ LY RE +L +
Sbjct: 116 GPEAPILAMKVSDSMPYGDGSNKVFGYENFGNTCYCNSVLQCLYNLSSLRENILQF 171
>sp|P39967|UBP9_YEAST Ubiquitin carboxyl-terminal hydrolase 9 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=UBP9 PE=1 SV=1
Length = 754
Score = 207 bits (526), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 114/304 (37%), Positives = 173/304 (56%), Gaps = 26/304 (8%)
Query: 65 EENLLTCLADLFTQIRAQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNEL 124
E L L D+F I TG+++P FV+ LKK+N LF + M QDAHEFLNFLLN+
Sbjct: 388 EATLYNGLKDIFESITENLSLTGIVSPTEFVKILKKENVLFNTMMQQDAHEFLNFLLNDF 447
Query: 125 VDILEKEEAAKSDPESSSPSEKTANGPTNGLANGVRKEPLVTWVHKNFQGILTNETRCLR 184
+ +++ ++P +KT N N ++ F+G LTN +CL
Sbjct: 448 SEYIQR-----NNPRMRFGPQKTDNSNDN-------------FITDLFKGTLTNRIKCLT 489
Query: 185 CETVTARDETFFDLSLDIE--QNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRM 242
C+ +T+RDE F D ++++ + + I LK++ E LN +KF+C+KC LQEA++ +
Sbjct: 490 CDNITSRDEPFLDFPIEVQGDEETDIQKMLKSYHQREMLNGVNKFYCNKCYGLQEAERMV 549
Query: 243 KIKKSPHTLVIHLKRFKYIEQLGRYKKLSYRVVFPLELKLSNTAEDADI-EYSLFAVVVH 301
+K+ PH L +HLKRFKY E+ KL ++++PL L +S+T + +Y L VV+H
Sbjct: 550 GLKQLPHILSLHLKRFKYSEEQKSNIKLFNKILYPLTLDVSSTFNTSVYKKYELSGVVIH 609
Query: 302 VGSGPNHGHYVSLVKSHNH-WLFFDDENVEMIDESAVQTFFGSAQEYSSNTDHGYILFYE 360
+GSGP HGHYV + ++ WL +DDE VE I E V F G + ++ Y+LFY+
Sbjct: 610 MGSGPQHGHYVCICRNEKFGWLLYDDETVESIKEETVLQFTGHPGDQTT----AYVLFYK 665
Query: 361 SLGA 364
A
Sbjct: 666 ETQA 669
Score = 52.0 bits (123), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Query: 11 ALGDQFPEGE---RYFGLENFGNTCYCNSVLQALYFCVPFREQLLDY 54
+ D P G+ + FG ENFGNTCYCNSVLQ LY FR +L Y
Sbjct: 119 TITDLMPYGDGSNKVFGYENFGNTCYCNSVLQCLYNIPEFRCNVLRY 165
>sp|Q9FPS2|UBP25_ARATH Ubiquitin carboxyl-terminal hydrolase 25 OS=Arabidopsis thaliana
GN=UBP25 PE=2 SV=1
Length = 661
Score = 133 bits (334), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 101/335 (30%), Positives = 157/335 (46%), Gaps = 32/335 (9%)
Query: 23 FGLENFGNTCYCNSVLQALYFCVPFREQLLDY----YSNNKNLGDAEENLLTCLADLFTQ 78
GL N GNTCY NSVLQ L F P L + + + G+ + + C+ +
Sbjct: 24 LGLRNLGNTCYLNSVLQCLTFTPPLANFCLTHKHSSHCDTYVDGERKRDCPFCIVEKRI- 82
Query: 79 IRAQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEKEEAAKSDP 138
R+ AP + LK E F+ +DAHEFL ++++ + + + + +
Sbjct: 83 ARSLSVDLTTDAPNKISSCLKIFAEHFKLGRQEDAHEFLRYVIDACHNTSLRLKKLRYN- 141
Query: 139 ESSSPSEKTANGPTNGLANGVRKEPLVTWVHKNFQGILTNETRCLRCETVTARDETFFDL 198
N P NG N V KE F G L ++ +CL C + + + D+
Sbjct: 142 ---------GNEPFNG--NSVVKEI--------FGGALQSQVKCLSCGAESNKADEIMDI 182
Query: 199 SLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKSPHTLVIHLKRF 258
SL+I Q+SS+ L+ F +E L+ +K+ C+ C L A+K+M I ++P+ LVI LKRF
Sbjct: 183 SLEILQSSSVKESLQKFFQSEILDGNNKYRCESCEKLVTARKQMSILQAPNILVIQLKRF 242
Query: 259 KYIEQLGRYKKLSYRVVFPLELKLSNTAEDADIEYSLFAVVVHVGSGPNHGHYVSLVK-S 317
I K +S+ + L +S ++D EY LF ++VH G P GHY + VK S
Sbjct: 243 GGIFGGKIDKAISFGEILVLSNFMSKASKDPQPEYKLFGIIVHSGFSPESGHYYAYVKDS 302
Query: 318 HNHWLFFDDENV------EMIDESAVQTFFGSAQE 346
W +D V E++ E A FF + +
Sbjct: 303 LGRWYCCNDSFVSLSTLQEVLSEKAYILFFSRSNQ 337
>sp|Q9FPS4|UBP23_ARATH Ubiquitin carboxyl-terminal hydrolase 23 OS=Arabidopsis thaliana
GN=UBP23 PE=2 SV=2
Length = 859
Score = 132 bits (331), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 99/342 (28%), Positives = 162/342 (47%), Gaps = 48/342 (14%)
Query: 24 GLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNNKNLGDAEENLLTCLADLFTQIRAQK 83
GL+N GNTC+ NSVLQ L + P L ++ K A L + +R +
Sbjct: 108 GLQNLGNTCFLNSVLQCLTYTEPL-AATLQTAAHQKYCHVAG---FCALCAIQKHVRTAR 163
Query: 84 KKTG-VIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEKEEAAKSDPESSS 142
+ G ++APK V L+ + FR+ +DAHE++ LL E K S
Sbjct: 164 QANGRILAPKDLVSNLRCISRNFRNCRQEDAHEYMINLL---------ECMHKCSLPSGV 214
Query: 143 PSEKTANGPTNGLANGVRKEPLVTWVHKNFQGILTNETRCLRCETVTARDETFFDLSLDI 202
PSE + + R+ + VHK F G L ++ +C +C + + + F DLSLDI
Sbjct: 215 PSESS---------DAYRR----SLVHKIFGGSLRSQVKCEQCSHCSNKFDPFLDLSLDI 261
Query: 203 EQNSSITSCLKNFSSTETLNAEDKFF-CDKCCSLQEAQKRMKIKKSPHTLVIHLKRFKYI 261
+ S+ L F++ E L+ K + C++C +A+K++ + K+P+ L +HLKRF
Sbjct: 262 SKADSLQRALSRFTAVELLDNGAKVYQCERCKQKVKAKKQLTVSKAPYVLTVHLKRF--- 318
Query: 262 EQLGRYKKLSYRVVFPLELKLS---NTAEDADIEYSLFAVVVHVGSGPNHGHYVSLVK-S 317
+ R +K+ +V F + + + + +++Y+L+ V+VH G + GHY V+ S
Sbjct: 319 -EAHRSEKIDRKVDFTSAIDMKPFVSGPHEGNLKYTLYGVLVHYGRSSHSGHYACFVRTS 377
Query: 318 HNHWLFFDDENVEMIDESAVQTFFGSAQEYSSNTDHGYILFY 359
W DD V + E +T F Y+LFY
Sbjct: 378 SGMWYSLDDNRVVQVSE---KTVFN---------QKAYMLFY 407
>sp|Q9SB51|UBP16_ARATH Ubiquitin carboxyl-terminal hydrolase 16 OS=Arabidopsis thaliana
GN=UBP16 PE=2 SV=1
Length = 1008
Score = 130 bits (328), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 163/342 (47%), Gaps = 46/342 (13%)
Query: 24 GLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNNKNLGDAEENLLTCLADLFTQIRAQK 83
GL N GN+C+ N V Q L F P L + + +E TC + ++A++
Sbjct: 543 GLINVGNSCFANVVFQCLMFTPPLTTYFLQQF--HSRACTKKEQCFTCGFEKLV-VKAKE 599
Query: 84 KKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEKEEAAKSDPESSSP 143
+K+ ++P + +L+ + +DAHEFL F+++ + + K A++ D SS
Sbjct: 600 EKS-PLSPNGLLSQLQNIGIFLGNGKEEDAHEFLRFVVDTMQSVCIK--ASEYDMTKSSK 656
Query: 144 SEKTANGPTNGLANGVRKEPLVTWVHKNFQGILTNETRCLRCETVTARDETFFDLSLDIE 203
E T T + F G L ++ +C++C+ + E DL+++I+
Sbjct: 657 LEDT------------------TLIGLTFGGYLRSKIKCMKCQVKSELREKMMDLTVEID 698
Query: 204 QN-SSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKSPHTLVIHLKRFKYIE 262
+ S++ L+ F+ TE L+ E+K+ C C S + A+K++KI + P+ L I LKRF
Sbjct: 699 GDISTLDDALRRFTRTEILDGENKYRCGSCKSYERAKKKLKITEPPNVLTIALKRF---- 754
Query: 263 QLGRYKKLSYRVVFPLELKLS---NTAEDADIEYSLFAVVVH--VGSGPNHGHYVSLVKS 317
Q G++ KL+ + FP L L+ + + +Y L+ V+VH V + GHYV +++
Sbjct: 755 QAGKFGKLNKLIRFPETLDLAPYVSGGSEKSHDYKLYGVIVHLDVMNAAFSGHYVCYIRN 814
Query: 318 HNHWLFFDDENVEMIDESAVQTFFGSAQEYSSNTDHGYILFY 359
N W DD V D + T Y+LFY
Sbjct: 815 QNKWYKADDSTVVTSDVERIL------------TKGAYMLFY 844
>sp|Q91W36|UBP3_MOUSE Ubiquitin carboxyl-terminal hydrolase 3 OS=Mus musculus GN=Usp3
PE=2 SV=1
Length = 520
Score = 127 bits (319), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 118/371 (31%), Positives = 165/371 (44%), Gaps = 57/371 (15%)
Query: 24 GLENFGNTCYCNSVLQAL----YFCVPFREQLLDYYSNNKNLGD------AEENLLTCLA 73
GL N GNTC+ N++LQ+L FC F+E N K G ++ + L
Sbjct: 160 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDSNVSLV 219
Query: 74 DLF--TQIRAQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEKE 131
+ F T + +P+ + K FR Y QDAHEF+ +LL+ L LE +
Sbjct: 220 EEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHL--HLELQ 277
Query: 132 EAAKSDPESSSPSEKTANGPTNGLA-NGVRKEPLVTWVHKNFQGILTNETRCLRCETVTA 190
S+ E + +N NG T V F GIL NE CL C T +
Sbjct: 278 GGFNGVSRSAILQENSTLSASNKCCINGAS-----TVVTAIFGGILQNEVNCLICGTESR 332
Query: 191 RDETFFDLSLDI-----------EQNSSITS---CLKNFSSTETLNAEDKFFCDKCCSLQ 236
+ + F DLSLDI ++N + S CL++F+ E L+ + + C KC Q
Sbjct: 333 KFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQ 392
Query: 237 EAQKRMKIKKSPHTLVIHLKRFKYIEQLGRYKKLSYRVVFPLE--------LKLSNTAED 288
++ K+ I+K P L +HLKRF + L K+ V FPL L+ N+ D
Sbjct: 393 KSTKKFWIQKLPKALCLHLKRFHWTAYL--RNKVDTYVQFPLRGLDMKCYLLEPENSGPD 450
Query: 289 ADIEYSLFAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMIDESAVQTFFGSAQEYS 348
+ + Y L AVVVH GSG GHY + W F+D V + DE V G A+
Sbjct: 451 SCL-YDLAAVVVHHGSGVGSGHYTAYAVHEGRWFHFNDSTVTVTDEETV----GKAK--- 502
Query: 349 SNTDHGYILFY 359
YILFY
Sbjct: 503 -----AYILFY 508
>sp|B2GUX4|UBP21_RAT Ubiquitin carboxyl-terminal hydrolase 21 OS=Rattus norvegicus
GN=Usp21 PE=2 SV=1
Length = 565
Score = 127 bits (319), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 110/371 (29%), Positives = 159/371 (42%), Gaps = 51/371 (13%)
Query: 19 GERYFGLENFGNTCYCNSVLQALYFCVPFREQLL--DYYSNNKNLGDAEENLLTCLADLF 76
G + GL N GNTC+ N+VLQ L P R+ L D+ G A+E L AD+
Sbjct: 208 GSGHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQE-LTEAFADVI 266
Query: 77 TQIRAQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNEL-VDILEKEEAAK 135
+ + P RF +K F Y QDA EFL L+ L ++I + A
Sbjct: 267 GAL-WHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAP 325
Query: 136 ----SDPESSSPSEKTANGPTNGLANGVRKEPLVTW----------VHKNFQGILTNETR 181
S P S P A L++ R + W + F G L +
Sbjct: 326 PILASGPVPSPPRRGGALHEEPELSDDDRAN--LMWKRYLEREDSKIVDLFVGQLKS--- 380
Query: 182 CLRCETVTARD---ETFFDLSLDIEQNS------SITSCLKNFSSTETLNAEDKFFCDKC 232
CL+C+ R E F DLSL I + S+ C F+ E L +E+ CD+C
Sbjct: 381 CLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEEELESENAPVCDRC 440
Query: 233 CSLQEAQKRMKIKKSPHTLVIHLKRFKYIEQLGRYKKLSYRVVFPLE-LKLSNTAED--A 289
+ K++ +++ P LV+HL RF G KK S V FPL+ L L + A D
Sbjct: 441 RQKTRSTKKLTVQRFPRILVLHLNRFSTSR--GSIKKSSVGVDFPLQRLSLGDFASDKVG 498
Query: 290 DIEYSLFAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMIDESAVQTFFGSAQEYSS 349
Y L+A+ H GS ++GHY +L + W ++D V + E+ V
Sbjct: 499 SPVYQLYALCNHSGSV-HYGHYTALCRCQTGWHVYNDSRVSPVSENQVA----------- 546
Query: 350 NTDHGYILFYE 360
+ GY+LFY+
Sbjct: 547 -SSEGYVLFYQ 556
>sp|A3AF13|UBP26_ORYSJ Ubiquitin carboxyl-terminal hydrolase 26 OS=Oryza sativa subsp.
japonica GN=UBP26 PE=2 SV=2
Length = 1079
Score = 126 bits (317), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/322 (30%), Positives = 155/322 (48%), Gaps = 50/322 (15%)
Query: 20 ERYFGLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNNKNLGDAEENLLTCLADLFTQI 79
E GL N G TCY NS+LQ LY FR L +S ++ +L LA LF Q+
Sbjct: 103 ETPAGLTNLGATCYANSILQCLYMNTSFR---LGIFSLEPDILKMHP-VLDQLARLFAQL 158
Query: 80 RAQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEKEEAAKSDPE 139
+ K AP F++ L+ N + QD+HEFL L+ L L +
Sbjct: 159 HSSKMAFIDSAP--FIKTLELDNGV-----QQDSHEFLTLFLSLLEGSLSHSKVP----- 206
Query: 140 SSSPSEKTANGPTNGLANGVRKEPLVTWVHKNFQGILTNETRCLRC---ETVTARDETFF 196
G R T V F+G +++ TRC C +++ E F+
Sbjct: 207 ------------------GAR-----TIVQHLFRGSVSHVTRCSSCGRDSEASSKMEDFY 243
Query: 197 DLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKSPHTLVIHLK 256
+L L+I+ +++ L ++ STE L+ E+++FC+ C +A + +K++ P + LK
Sbjct: 244 ELELNIKGLNNLEQSLDDYLSTEALDGENQYFCESCQKRVDATRCIKLRSLPPVVNFQLK 303
Query: 257 RFKYIEQLGRYKKLSYRVVFPLEL----KLSNTAEDADIEYSLFAVVVHVGSGPNHGHYV 312
R+ ++ + KK+S FP +L +LSN + + Y L A+++H GS N GHYV
Sbjct: 304 RYVFLPKTTTKKKISSAFSFPGQLDMGKRLSNPS--SSYTYGLSAILIHKGSAANSGHYV 361
Query: 313 SLVK--SHNHWLFFDDENVEMI 332
+ VK S+ W FDDE+V +
Sbjct: 362 AHVKDESNGQWWEFDDEHVSKL 383
>sp|A2XDG4|UBP26_ORYSI Ubiquitin carboxyl-terminal hydrolase 26 OS=Oryza sativa subsp.
indica GN=UBP26 PE=2 SV=1
Length = 1079
Score = 126 bits (317), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/322 (30%), Positives = 155/322 (48%), Gaps = 50/322 (15%)
Query: 20 ERYFGLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNNKNLGDAEENLLTCLADLFTQI 79
E GL N G TCY NS+LQ LY FR L +S ++ +L LA LF Q+
Sbjct: 103 ETPAGLTNLGATCYANSILQCLYMNTSFR---LGIFSLEPDILKMHP-VLDQLARLFAQL 158
Query: 80 RAQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEKEEAAKSDPE 139
+ K AP F++ L+ N + QD+HEFL L+ L L +
Sbjct: 159 HSSKMAFIDSAP--FIKTLELDNGV-----QQDSHEFLTLFLSLLEGSLSHSKVP----- 206
Query: 140 SSSPSEKTANGPTNGLANGVRKEPLVTWVHKNFQGILTNETRCLRC---ETVTARDETFF 196
G R T V F+G +++ TRC C +++ E F+
Sbjct: 207 ------------------GAR-----TIVQHLFRGSVSHVTRCSSCGRDSEASSKMEDFY 243
Query: 197 DLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKSPHTLVIHLK 256
+L L+I+ +++ L ++ STE L+ E+++FC+ C +A + +K++ P + LK
Sbjct: 244 ELELNIKGLNNLEQSLDDYLSTEALDGENQYFCESCQKRVDATRCIKLRSLPPVVNFQLK 303
Query: 257 RFKYIEQLGRYKKLSYRVVFPLEL----KLSNTAEDADIEYSLFAVVVHVGSGPNHGHYV 312
R+ ++ + KK+S FP +L +LSN + + Y L A+++H GS N GHYV
Sbjct: 304 RYVFLPKTTTKKKISSAFSFPGQLDMGKRLSNPS--SSYTYGLSAILIHKGSAANSGHYV 361
Query: 313 SLVK--SHNHWLFFDDENVEMI 332
+ VK S+ W FDDE+V +
Sbjct: 362 AHVKDESNGQWWEFDDEHVSKL 383
>sp|Q9QZL6|UBP21_MOUSE Ubiquitin carboxyl-terminal hydrolase 21 OS=Mus musculus GN=Usp21
PE=1 SV=1
Length = 566
Score = 126 bits (316), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 109/374 (29%), Positives = 159/374 (42%), Gaps = 56/374 (14%)
Query: 19 GERYFGLENFGNTCYCNSVLQALYFCVPFREQLL--DYYSNNKNLGDAEENLLTCLADLF 76
G + GL N GNTC+ N+VLQ L P R+ L D+ G A+E L AD+
Sbjct: 208 GSGHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQE-LTEAFADVI 266
Query: 77 TQIRAQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEKEEAAKS 136
+ + P RF +K F Y QDA EFL L+ L LE +
Sbjct: 267 GAL-WHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERL--HLEINRRGRR 323
Query: 137 DPESSSPSEKTANGPTNGLANGVRKEPLVT--------W----------VHKNFQGILTN 178
P + S + P G + +EP ++ W + F G L +
Sbjct: 324 APPILA-SGPVPSPPRRG-GGALHEEPELSDDDRANLMWKRYLEREDSKIVDLFVGQLKS 381
Query: 179 ETRCLRCETVTARD---ETFFDLSLDIEQNS------SITSCLKNFSSTETLNAEDKFFC 229
CL+C+ R E F DLSL I + S+ C F+ E L +E+ C
Sbjct: 382 ---CLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEEELESENAPVC 438
Query: 230 DKCCSLQEAQKRMKIKKSPHTLVIHLKRFKYIEQLGRYKKLSYRVVFPLE-LKLSNTAED 288
D+C + K++ +++ P LV+HL RF G KK S V FPL+ L L + A D
Sbjct: 439 DRCRQKTRSTKKLTVQRFPRILVLHLNRFSTSR--GSIKKSSVGVDFPLQRLSLGDFASD 496
Query: 289 --ADIEYSLFAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMIDESAVQTFFGSAQE 346
Y L+A+ H GS ++GHY +L + W ++D V + E+ V
Sbjct: 497 KAGSPVYQLYALCNHSGSV-HYGHYTALCRCQTGWHVYNDSRVSPVSENQVA-------- 547
Query: 347 YSSNTDHGYILFYE 360
+ GY+LFY+
Sbjct: 548 ----SSEGYVLFYQ 557
>sp|Q2KJ72|UBP21_BOVIN Ubiquitin carboxyl-terminal hydrolase 21 OS=Bos taurus GN=USP21
PE=2 SV=1
Length = 565
Score = 126 bits (316), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 109/376 (28%), Positives = 160/376 (42%), Gaps = 61/376 (16%)
Query: 19 GERYFGLENFGNTCYCNSVLQALYFCVPFREQLL--DYYSNNKNLGDAEENLLTCLADLF 76
G + GL N GNTC+ N++LQ L P R+ L D+ G A+E L AD+
Sbjct: 208 GSGHVGLRNLGNTCFLNALLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQE-LTEAFADVI 266
Query: 77 TQIRAQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEKEEAAKS 136
+ + P RF +K F Y QDA EFL L+ L LE +
Sbjct: 267 GAL-WHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERL--HLEINRRGRR 323
Query: 137 DPE--SSSPSEKTANGPTNGLANGVRKEPLVT--------W----------VHKNFQGIL 176
P +SSP+ L + +EP ++ W + F G L
Sbjct: 324 APPILASSPAPHPPR-----LGGALLEEPELSDDDRANLMWKRYLEREDSKIVDLFVGQL 378
Query: 177 TNETRCLRCETVTARD---ETFFDLSLDIEQNS------SITSCLKNFSSTETLNAEDKF 227
+ CL+C+ R E F DLSL I + S+ C F+ E L +E+
Sbjct: 379 KS---CLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEELESENAP 435
Query: 228 FCDKCCSLQEAQKRMKIKKSPHTLVIHLKRFKYIEQLGRYKKLSYRVVFPLE-LKLSNTA 286
CD+C + K++ +++ P LV+HL RF G KK S V FPL+ L L + A
Sbjct: 436 VCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSASR--GSIKKSSVGVDFPLQRLSLGDFA 493
Query: 287 ED--ADIEYSLFAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMIDESAVQTFFGSA 344
D Y L+A+ H GS ++GHY +L + W ++D V + E+ V
Sbjct: 494 SDKAGSPVYQLYALCNHSGSV-HYGHYTALCRCQTGWHVYNDSRVSPVSENQVA------ 546
Query: 345 QEYSSNTDHGYILFYE 360
+ GY+LFY+
Sbjct: 547 ------SSEGYVLFYQ 556
>sp|Q9Y6I4|UBP3_HUMAN Ubiquitin carboxyl-terminal hydrolase 3 OS=Homo sapiens GN=USP3
PE=1 SV=2
Length = 520
Score = 125 bits (315), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 120/383 (31%), Positives = 170/383 (44%), Gaps = 61/383 (15%)
Query: 24 GLENFGNTCYCNSVLQAL----YFCVPFREQLLDYYSNNKNLG-------DAEENLLTCL 72
GL N GNTC+ N++LQ+L FC F+E N K G +N ++ +
Sbjct: 160 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNVSLV 219
Query: 73 ADLFTQIRA--QKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEK 130
+ + A Q +T +P+ + K FR Y QDAHEF+ +LL+ L LE
Sbjct: 220 EEFRKTLCALWQGSQTA-FSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHL--HLEL 276
Query: 131 EEAAKSDPESSSPSEKTANGPTNGLA-NGVRKEPLVTWVHKNFQGILTNETRCLRCETVT 189
+ S+ E + +N NG T V F GIL NE CL C T +
Sbjct: 277 QGGFNGVSRSAILQENSTLSASNKCCINGAS-----TVVTAIFGGILQNEVNCLICGTES 331
Query: 190 ARDETFFDLSLDI-----------EQNSSITS---CLKNFSSTETLNAEDKFFCDKCCSL 235
+ + F DLSLDI ++N + S CL++F+ E L+ + + C KC
Sbjct: 332 RKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKK 391
Query: 236 QEAQKRMKIKKSPHTLVIHLKRFKYIEQLGRYKKLSYRVVFPLE--------LKLSNTAE 287
Q++ K+ I+K P L +HLKRF + L K+ V FPL L+ N+
Sbjct: 392 QKSTKKFWIQKLPKVLCLHLKRFHWTAYL--RNKVDTYVEFPLRGLDMKCYLLEPENSGP 449
Query: 288 DADIEYSLFAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMIDESAVQTFFGSAQEY 347
++ + Y L AVVVH GSG GHY + W F+D V + DE V
Sbjct: 450 ESCL-YDLAAVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDEETVV--------- 499
Query: 348 SSNTDHGYILFY--ESLGAGSNK 368
YILFY AGS+K
Sbjct: 500 ---KAKAYILFYVEHQAKAGSDK 519
>sp|Q9UK80|UBP21_HUMAN Ubiquitin carboxyl-terminal hydrolase 21 OS=Homo sapiens GN=USP21
PE=1 SV=1
Length = 565
Score = 125 bits (313), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 109/371 (29%), Positives = 158/371 (42%), Gaps = 51/371 (13%)
Query: 19 GERYFGLENFGNTCYCNSVLQALYFCVPFREQLL--DYYSNNKNLGDAEENLLTCLADLF 76
G + GL N GNTC+ N+VLQ L P R+ L D+ G A+E L AD+
Sbjct: 208 GSGHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQE-LTEAFADVI 266
Query: 77 TQIRAQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNEL-VDILEKEEAAK 135
+ + P RF +K F Y QDA EFL L+ L ++I + A
Sbjct: 267 GAL-WHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAP 325
Query: 136 S----DPESSSPSEKTANGPTNGLANGVRKEPLVTW----------VHKNFQGILTNETR 181
P S P A L++ R + W + F G L +
Sbjct: 326 PILANGPVPSPPRRGGALLEEPELSDDDRAN--LMWKRYLEREDSKIVDLFVGQLKS--- 380
Query: 182 CLRCETVTARD---ETFFDLSLDIEQNS------SITSCLKNFSSTETLNAEDKFFCDKC 232
CL+C+ R E F DLSL I + S+ C F+ E L +E+ CD+C
Sbjct: 381 CLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEELESENAPVCDRC 440
Query: 233 CSLQEAQKRMKIKKSPHTLVIHLKRFKYIEQLGRYKKLSYRVVFPLE-LKLSNTAED--A 289
+ K++ +++ P LV+HL RF G KK S V FPL+ L L + A D
Sbjct: 441 RQKTRSTKKLTVQRFPRILVLHLNRFSASR--GSIKKSSVGVDFPLQRLSLGDFASDKAG 498
Query: 290 DIEYSLFAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMIDESAVQTFFGSAQEYSS 349
Y L+A+ H GS ++GHY +L + W ++D V + E+ V
Sbjct: 499 SPVYQLYALCNHSGSV-HYGHYTALCRCQTGWHVYNDSRVSPVSENQVA----------- 546
Query: 350 NTDHGYILFYE 360
+ GY+LFY+
Sbjct: 547 -SSEGYVLFYQ 556
>sp|B1AQJ2|UBP36_MOUSE Ubiquitin carboxyl-terminal hydrolase 36 OS=Mus musculus GN=Usp36
PE=2 SV=1
Length = 1098
Score = 124 bits (310), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 156/363 (42%), Gaps = 61/363 (16%)
Query: 20 ERYF----GLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNNKNLGDAEENLLTCLADL 75
ER F GL N GNTC+ NS +Q L + P LL ++E+ +C
Sbjct: 115 ERVFRVGAGLHNLGNTCFLNSTIQCLTYTPPLANYLL-----------SKEHARSCHQGG 163
Query: 76 FTQ--------IRAQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDI 127
F ++A I P F++ LKK FR +DAHEFL + +D
Sbjct: 164 FCMLCLMQNHMVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYT----IDA 219
Query: 128 LEKEEAAKSDPESSSPSEKTANGPTNGLANGVRKEPLVTWVHKNFQGILTNETRCLRCET 187
++K NG A R+ T VH+ F G L + +C C++
Sbjct: 220 MQKAC-------------------LNGYAKLDRQTQATTLVHQIFGGYLRSRVKCSVCKS 260
Query: 188 VTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKS 247
V+ + + D++L+I Q ++I L+ F ++ L+ E+ + C KC A KR I ++
Sbjct: 261 VSDTYDPYLDIALEIRQAANIVRALELFVKSDVLSGENAYMCAKCKKKVPASKRFTIHRT 320
Query: 248 PHTLVIHLKRFKYIEQLGRYKKLSYRVVFPLELKLSNTAEDADIEYSLFAVVVHVGSGPN 307
+ L + LKRF K + Y + +S ++ D + Y L+AV+VH G +
Sbjct: 321 SNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQSSGDP-VMYGLYAVLVHSGYSCH 379
Query: 308 HGHYVSLVKSHN-HWLFFDDENVEMIDESAVQTFFGSAQEYSSNTDHGYILFYESLGAGS 366
GHY VK+ N W +D ++ S V+ Y+LFY + GS
Sbjct: 380 AGHYYCYVKASNGQWYQMND---SLVHSSNVKVVL---------NQQAYVLFYLRI-PGS 426
Query: 367 NKS 369
KS
Sbjct: 427 KKS 429
>sp|Q9FKP5|UBP17_ARATH Ubiquitin carboxyl-terminal hydrolase 17 OS=Arabidopsis thaliana
GN=UBP17 PE=2 SV=1
Length = 731
Score = 122 bits (307), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 148/315 (46%), Gaps = 39/315 (12%)
Query: 23 FGLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNNKNLGDAEENLLTCLADLFTQIRAQ 82
FGL N GN+CY N+VLQ L F P L+ Y + + + + I
Sbjct: 329 FGLVNLGNSCYANAVLQCLAFTRP----LISYLIRGLHSKTCRKKSWCFVCEFEHLILKA 384
Query: 83 KKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEKEEAAKSDPESSS 142
+ ++P + + +L+K + +DAHEFL ++ + + KE P +
Sbjct: 385 RGGESPLSPIKILSKLQKIGKHLGPGKEEDAHEFLRCAVDTMQSVFLKEA-----PAAGP 439
Query: 143 PSEKTANGPTNGLANGVRKEPLVTWVHKNFQGILTNETRCLRCETVTARDETFFDLSLDI 202
+E+T T V F G L ++ +C+ C + R E DL+++I
Sbjct: 440 FAEET------------------TLVGLTFGGYLHSKIKCMACLHKSERPELMMDLTVEI 481
Query: 203 EQN-SSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKSPHTLVIHLKRFKYI 261
+ + S+ L F++ E L+ E+++FC +C S Q+A+K++ I + P+ L + LKRF
Sbjct: 482 DGDIGSLEEALAQFTAYEVLDGENRYFCGRCKSYQKAKKKLMILEGPNILTVVLKRF--- 538
Query: 262 EQLGRYKKLSYRVVFPLELKLSNTAEDAD----IEYSLFAVVVHVGSGPN--HGHYVSLV 315
Q + KLS + FP L +S D + YSL+AVVVH+ + GHYV +
Sbjct: 539 -QSDNFGKLSKPIHFPELLDISPYMSDPNHGDHPVYSLYAVVVHLDAMSTLFSGHYVCYI 597
Query: 316 KS-HNHWLFFDDENV 329
K+ W DD NV
Sbjct: 598 KTLDGDWFKIDDSNV 612
>sp|O74442|UBP16_SCHPO Probable ubiquitin carboxyl-terminal hydrolase 16
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=ubp16 PE=1 SV=1
Length = 457
Score = 122 bits (306), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 152/359 (42%), Gaps = 63/359 (17%)
Query: 24 GLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNNKNLGDAEENLLTCLADLFTQIRAQK 83
GL N GNTC+ NSVLQ + P + LL + ++ L+C + R ++
Sbjct: 126 GLVNLGNTCFMNSVLQLMTQTPPLVQYLL-----------SGQHSLSCRMNACVLCRMEQ 174
Query: 84 -----------KKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEKEE 132
K+ P LK + FR Y +DAHEF+ +L VD +K
Sbjct: 175 HVARAYPNKGTKRASAFKPSGIQSMLKVISSHFRPYRQEDAHEFMRYL----VDAWQKS- 229
Query: 133 AAKSDPESSSPSEKTANGPTNGLANGVRKEPLVTWVHKNFQGILTNETRCLRCETVTARD 192
++ PS +T + VH+ F G L + C C+ +
Sbjct: 230 CLQNHKNLDHPSRET------------------SVVHRIFGGYLRQQILCSVCKKPSNTY 271
Query: 193 ETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKSPHTLV 252
+ DLS+D + SS+ LK+F E L ++K+ C+ C L +A K+M I ++P+ L
Sbjct: 272 QALLDLSVD-AKGSSLADSLKHFVHAEKLTKQNKYRCENCKQLVDASKQMTIYRAPNILT 330
Query: 253 IHLKRFKYIEQLGRYKKLSYRVVFPLELKLSNTAEDADIE--YSLFAVVVHVGSGPNHGH 310
IH KRF + + K+S ++ +P L D + Y L V+VH G GH
Sbjct: 331 IHFKRFTF--NGFQSSKISKQISYPESFNLGPYMSDPNCSCWYELIGVLVHAGGSTRSGH 388
Query: 311 YVSLVKSHNH-WLFFDDENVEMIDESAVQTFFGSAQEYSSNTDHGYILFYESLGAGSNK 368
Y S KS N WL FDD + + S++ YIL Y+ S+K
Sbjct: 389 YYSFCKSSNGVWLKFDD---DFVSNSSIDRVLN---------QQAYILQYKRKSTSSSK 435
>sp|P40818|UBP8_HUMAN Ubiquitin carboxyl-terminal hydrolase 8 OS=Homo sapiens GN=USP8 PE=1
SV=1
Length = 1118
Score = 121 bits (304), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 117/369 (31%), Positives = 166/369 (44%), Gaps = 53/369 (14%)
Query: 19 GERYFGLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNN--------KNL----GDAEE 66
G GL N GNTCY NS+LQ C+ L DY++ N NL G+ E
Sbjct: 773 GPALTGLRNLGNTCYMNSILQ----CLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAE 828
Query: 67 NLLTCLADLFT-QIRAQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELV 125
+ L+T Q R I+PK F + K N+ F Y QD+ E L FL++ L
Sbjct: 829 EFGIIMKALWTGQYR-------YISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLH 881
Query: 126 DILEKEEAAKSDPESSSPSEKTANGPTNGLANGVR-KEPLVTWVHKNFQGILTNETRCLR 184
+ L K + K E ++ + + E ++ + FQG + +CL
Sbjct: 882 EDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVAL---FQGQFKSTVQCLT 938
Query: 185 CETVTARDETFFDLSLDIEQNSSIT--SCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRM 242
C + E F LSL + S T CL+ FS E L ++F+C C + +++ K++
Sbjct: 939 CHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKI 998
Query: 243 KIKKSPHTLVIHLKRFKYIEQLGRYK-KLSYRVVFPLE-LKLSN---TAEDADIEYSLFA 297
+I K P L++HLKRF Y GR+K KL V FPLE L LS ++ +Y+LF+
Sbjct: 999 EIWKLPPVLLVHLKRFSYD---GRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKKYNLFS 1055
Query: 298 VVVHVGSGPNHGHYVSLVK--SHNHWLFFDDENVEMIDESAVQTFFGSAQEYSSNTDHGY 355
V H G G + GHY + K + W FDD V S + Y
Sbjct: 1056 VSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVS------------DISVSSVKSSAAY 1102
Query: 356 ILFYESLGA 364
ILFY SLG
Sbjct: 1103 ILFYTSLGP 1111
>sp|Q80U87|UBP8_MOUSE Ubiquitin carboxyl-terminal hydrolase 8 OS=Mus musculus GN=Usp8 PE=1
SV=2
Length = 1080
Score = 121 bits (304), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 118/367 (32%), Positives = 167/367 (45%), Gaps = 51/367 (13%)
Query: 19 GERYFGLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNN--------KNL----GDAEE 66
G GL N GNTCY NS+LQ C+ L DY++ N NL G+ E
Sbjct: 735 GPALTGLRNLGNTCYMNSILQ----CLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAE 790
Query: 67 NLLTCLADLFT-QIRAQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELV 125
+ L+T Q R I+PK F + K N+ F QD+ E L FL++ L
Sbjct: 791 EFGIIMKALWTGQYR-------YISPKDFKVTIGKINDQFAGSSQQDSQELLLFLMDGLH 843
Query: 126 DILEKEEAAKSDPESSSPSEKTANGPTNGLANGVRKEPLVTWVHKNFQGILTNETRCLRC 185
+ L K + K E ++ E + A K+ + + FQG + +CL C
Sbjct: 844 EDLNKADNRKRHKEENN--EHLDDLQAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTC 901
Query: 186 ETVTARDETFFDLSLDIEQNSSIT--SCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMK 243
+ E F LSL + S T CL+ FS E L ++F+C C + +++ K+++
Sbjct: 902 RRRSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIE 961
Query: 244 IKKSPHTLVIHLKRFKYIEQLGRYK-KLSYRVVFPLE-LKLSN---TAEDADIEYSLFAV 298
I K P L++HLKRF Y GR+K KL V FPLE L LS +++ +Y+LF+V
Sbjct: 962 IWKLPPVLLVHLKRFSYD---GRWKQKLQTSVDFPLENLDLSQYVIGPKNSLKKYNLFSV 1018
Query: 299 VVHVGSGPNHGHYVSLVK--SHNHWLFFDDENVEMIDESAVQTFFGSAQEYSSNTDHGYI 356
H G G + GHY + K + W FDD V S + YI
Sbjct: 1019 SNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVS------------DISVSSVRSSAAYI 1065
Query: 357 LFYESLG 363
LFY SLG
Sbjct: 1066 LFYTSLG 1072
>sp|Q6P8X6|UBP50_MOUSE Putative ubiquitin carboxyl-terminal hydrolase 50 OS=Mus musculus
GN=Usp50 PE=2 SV=1
Length = 390
Score = 121 bits (304), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 113/372 (30%), Positives = 169/372 (45%), Gaps = 48/372 (12%)
Query: 2 GAAGSKLEKALGDQFPEG--ERYF----GLENFGNTCYCNSVLQALYFCVPFREQLLDYY 55
GA + E A D PE + +F GL N GNTCY N++LQ L P L++Y+
Sbjct: 18 GAYYNLAECADYDSLPESKTQPHFQGVTGLRNLGNTCYMNAILQCLCSVSP----LVEYF 73
Query: 56 SNNKNLGDAEEN---LLTCLADLFTQIRAQKKKTGVIAPKRFVQRLKKQNELFRSYMHQD 112
+ K + +++ + T A L T + + ++P+ F+ + F QD
Sbjct: 74 LSGKYITALKKDCSEVTTAFAYLMTDMWL--GDSDCVSPEIFLSAVGSLYPAFLKKTQQD 131
Query: 113 AHEFLNFLLNELVDILEKEEAAKSDPESSSPSEKTANGPTNGLANGVRKEPL--VTWVHK 170
A EFL ++LNEL + L+K + N G + RK P + + +
Sbjct: 132 AQEFLIYVLNELHEALKKH------------CRRRVNEKRTG-QSCCRKVPAQETSIITR 178
Query: 171 NFQGILTNETRCLRCETVTARDETFFDLSLDIEQN--SSITSCLKNFSSTETLNAEDKFF 228
F+G L+ CL+CE+ T ++E F LSL I + S+ CL+ F +TL ++ +
Sbjct: 179 LFEGQLSYSITCLKCESCTHKNEVFTILSLPIPSDYECSLQDCLQCFFQQDTLTWSNQIY 238
Query: 229 CDKCCSLQEAQKRMKIKKSPHTLVIHLKRFKYIEQLGRYKKLSYRVVFPLELKLSNTAED 288
C C QEA R I K P +V H KRF + R KL + +PL L T
Sbjct: 239 CSFCEIKQEAAVRTTISKVPKIIVFHFKRFDIQGTVKR--KLRTDIHYPLT-NLDLTPYI 295
Query: 289 ADI-----EYSLFAVVVHVGSGPNHGHYVSLVKSH--NHWLFFDDENVEMIDESAVQT-- 339
+ Y+L AVV H G + GHY + K+ W FDD V I +++VQT
Sbjct: 296 CPVFRKHPMYNLCAVVNHFGDL-DGGHYTAFCKNSVTQAWYSFDDTRVSEIPDTSVQTAT 354
Query: 340 ---FFGSAQEYS 348
F S Q +S
Sbjct: 355 AYLLFYSCQPFS 366
>sp|Q7M764|U17L2_MOUSE Ubiquitin carboxyl-terminal hydrolase 17 OS=Mus musculus GN=Usp17l2
PE=3 SV=2
Length = 540
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 142/338 (42%), Gaps = 46/338 (13%)
Query: 24 GLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNNKNLGDAEENLLTCLADLFTQIRAQK 83
GL+N GN+CY N+ LQ L P + +L +++ E + + TQ
Sbjct: 86 GLQNTGNSCYLNAALQCLTHTPPLADYMLSQ-EHSQTCCSPEGCKMCAMEAHVTQSLLHS 144
Query: 84 KKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVD-ILEKEEAAKSDPESSS 142
V+ P + + F + +DAHEFL F L + + L+ + P+ +S
Sbjct: 145 HSGDVMKPSQIL------TSAFHKHQQEDAHEFLMFTLETMHESCLQVHRQSDPTPQDTS 198
Query: 143 PSEKTANGPTNGLANGVRKEPLVTWVHKNFQGILTNETRCLRCETVTARDETFFDLSLDI 202
P +H F G ++ +CL C+ + + F D+ LDI
Sbjct: 199 P------------------------IHDIFGGWWRSQIKCLHCQGTSHTFDPFLDVPLDI 234
Query: 203 EQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKSPHTLVIHLKRFKYIE 262
S+ L + +E L E+ ++C +C A K + + +P L++ LKRF
Sbjct: 235 SSAQSVNQALWDTGKSEELLGENAYYCGRCRQKMPASKTLHVHIAPKVLLLVLKRFSAFT 294
Query: 263 QLGRYKKLSYRVVFPLELKLSNTAEDADIEYSLFAVVVHVGSGPNHGHYVSLVKS-HNHW 321
+K+SY L+ LS + Y+L+AV+VH G+ N GHY VK+ H W
Sbjct: 295 GNKLDRKVSYPEFLDLKPYLSEPT-GGPLPYALYAVLVHDGATSNSGHYFCCVKAGHGKW 353
Query: 322 LFFDDENVEMIDESAVQTFFGSAQEYSSNTDHGYILFY 359
DD V D ++V ++ Y+LFY
Sbjct: 354 YKMDDTKVTRCDVTSVL------------NENAYVLFY 379
>sp|Q9P275|UBP36_HUMAN Ubiquitin carboxyl-terminal hydrolase 36 OS=Homo sapiens GN=USP36
PE=1 SV=3
Length = 1121
Score = 119 bits (299), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 153/363 (42%), Gaps = 61/363 (16%)
Query: 20 ERYF----GLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNNKNLGDAEENLLTCLADL 75
ER F GL N GNTC+ N+ +Q L + P LL ++E+ +C
Sbjct: 115 ERVFRVGAGLHNLGNTCFLNATIQCLTYTPPLANYLL-----------SKEHARSCHQGS 163
Query: 76 FTQ--------IRAQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDI 127
F ++A I P F++ LKK FR +DAHEFL + +D
Sbjct: 164 FCMLCVMQNHIVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYT----IDA 219
Query: 128 LEKEEAAKSDPESSSPSEKTANGPTNGLANGVRKEPLVTWVHKNFQGILTNETRCLRCET 187
++K NG A R+ T VH+ F G L + +C C++
Sbjct: 220 MQKAC-------------------LNGCAKLDRQTQATTLVHQIFGGYLRSRVKCSVCKS 260
Query: 188 VTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKS 247
V+ + + D++L+I Q ++I L+ F + L+ E+ + C KC A KR I ++
Sbjct: 261 VSDTYDPYLDVALEIRQAANIVRALELFVKADVLSGENAYMCAKCKKKVPASKRFTIHRT 320
Query: 248 PHTLVIHLKRFKYIEQLGRYKKLSYRVVFPLELKLSNTAEDADIEYSLFAVVVHVGSGPN 307
+ L + LKRF K + Y + +S D + Y L+AV+VH G +
Sbjct: 321 SNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQNNGDP-VMYGLYAVLVHSGYSCH 379
Query: 308 HGHYVSLVKSHN-HWLFFDDENVEMIDESAVQTFFGSAQEYSSNTDHGYILFYESLGAGS 366
GHY VK+ N W +D ++ S V+ Y+LFY + GS
Sbjct: 380 AGHYYCYVKASNGQWYQMND---SLVHSSNVKVVL---------NQQAYVLFYLRI-PGS 426
Query: 367 NKS 369
KS
Sbjct: 427 KKS 429
>sp|Q61068|UBPW_MOUSE Ubiquitin carboxyl-terminal hydrolase DUB-1 OS=Mus musculus GN=Dub1
PE=1 SV=1
Length = 526
Score = 119 bits (297), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 147/351 (41%), Gaps = 47/351 (13%)
Query: 11 ALGDQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNNKNLGDAEENLLT 70
+L + P+G GL+N GN+CY N+ LQ L P + +L +++ E L
Sbjct: 40 SLSWESPQGPG-CGLQNTGNSCYLNAALQCLTHTPPLADYMLSQ-EHSQTCCSPEGCKLC 97
Query: 71 CLADLFTQIRAQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVD-ILE 129
+ L TQ V+ P + F + +DAHEFL F L + + L+
Sbjct: 98 AMEALVTQSLLHSHSGDVMKPSHIL------TSAFHKHQQEDAHEFLMFTLETMHESCLQ 151
Query: 130 KEEAAKSDPESSSPSEKTANGPTNGLANGVRKEPLVTWVHKNFQGILTNETRCLRCETVT 189
+K E SSP +H F G ++ +CL C+ +
Sbjct: 152 VHRQSKPTSEDSSP------------------------IHDIFGGWWRSQIKCLLCQGTS 187
Query: 190 ARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKSPH 249
+ F D+ LDI S+ L + +E L ++ ++C KC A K + + +P
Sbjct: 188 DTYDRFLDIPLDISSAQSVKQALWDTEKSEELCGDNAYYCGKCRQKMPASKTLHVHIAPK 247
Query: 250 TLVIHLKRFKYIEQLGRYKKLSYRVVFPLELKLSNTAEDADIEYSLFAVVVHVGSGPNHG 309
L++ L RF +K+SY L+ LS + Y+L+AV+VH G+ + G
Sbjct: 248 VLMVVLNRFSAFTGNKLDRKVSYPEFLDLKPYLSEPT-GGPLPYALYAVLVHDGATSHSG 306
Query: 310 HYVSLVKS-HNHWLFFDDENVEMIDESAVQTFFGSAQEYSSNTDHGYILFY 359
HY VK+ H W DD V D ++V ++ Y+LFY
Sbjct: 307 HYFCCVKAGHGKWYKMDDTKVTRCDVTSVL------------NENAYVLFY 345
>sp|B2RQC2|UBP42_MOUSE Ubiquitin carboxyl-terminal hydrolase 42 OS=Mus musculus GN=Usp42
PE=2 SV=1
Length = 1324
Score = 118 bits (295), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 146/345 (42%), Gaps = 56/345 (16%)
Query: 24 GLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNNKNLGDAEENLLTCLADLFTQI---- 79
GL+N GNTC+ N+ LQ L + P +L + E+ TC A+ F +
Sbjct: 111 GLQNLGNTCFANAALQCLTYTPPLANYMLSH-----------EHSKTCHAEGFCMMCTMQ 159
Query: 80 ----RAQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEKEEAAK 135
+A VI P + +++ FR +DAHEFL + VD ++K
Sbjct: 160 THITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYT----VDAMQK----- 210
Query: 136 SDPESSSPSEKTANGPTNGLANGVRKEPLVTWVHKNFQGILTNETRCLRCETVTARDETF 195
NG +N L + LV + F G L + +CL C+ V+ + +
Sbjct: 211 ----------ACLNG-SNKLDRHTQATTLVCQI---FGGYLRSRVKCLNCKGVSDTFDPY 256
Query: 196 FDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKSPHTLVIHL 255
D++L+I+ S+T L+ F E L+ E+ + C KC + A KR I +S + L I L
Sbjct: 257 LDITLEIKAAQSVTKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTISL 316
Query: 256 KRFKYIEQLGRYKKLSYRVVFPLELKLSNTAEDADIEYSLFAVVVHVGSGPNHGHYVSLV 315
KRF K + Y + +S + I Y L+AV+VH G + GHY +
Sbjct: 317 KRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPII-YVLYAVLVHTGFNCHAGHYFCYI 375
Query: 316 KSHNH-WLFFDDENVEMIDESAVQTFFGSAQEYSSNTDHGYILFY 359
K+ N W +D V D AV Y+LFY
Sbjct: 376 KASNGLWYQMNDSIVSTSDIRAVL------------NQQAYVLFY 408
>sp|Q67XW5|UBP18_ARATH Ubiquitin carboxyl-terminal hydrolase 18 OS=Arabidopsis thaliana
GN=UBP18 PE=2 SV=2
Length = 631
Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 159/355 (44%), Gaps = 51/355 (14%)
Query: 24 GLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNNKNLGDAEENLLTCLADLFTQIRAQK 83
GL N GN+C+ N +LQ L + P L+ Y + + N L + T +
Sbjct: 169 GLMNCGNSCFANVILQCLSWTRP----LVAYLLEKGHKRECMRNDWCFLCEFQTHVERAS 224
Query: 84 KKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDI-LEKEEAAKSDPESSS 142
+ +P + RL +DAHEF+ + ++ + + L++ K P S
Sbjct: 225 QSRFPFSPMNIISRLTNIGGTLGYGRQEDAHEFMRYAIDMMQSVCLDEFGGEKIVPPRSQ 284
Query: 143 PSEKTANGPTNGLANGVRKEPLVTWVHKNFQGILTNETRCLRCETVTARDETFFDLSLDI 202
+ T + F G+L ++ +C C V+ + E DL +++
Sbjct: 285 ET---------------------TLIQYIFGGLLQSQVQCTVCNHVSDQYENMMDLIVEM 323
Query: 203 EQNS-SITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKSPHTLVIHLKRFKYI 261
++ S+ CL F++ E L+ ++ + CD+C +A KR+ I+++P+ L I LKR+
Sbjct: 324 HGDAGSLEECLDQFTAEEWLHGDNMYKCDRCSDYVKACKRLTIRRAPNILTIALKRY--- 380
Query: 262 EQLGRYKKLSYRVVFPLELKL----SNTAEDADIEYSLFAVVVHVG--SGPNHGHYVSLV 315
Q GRY KL+ R+ FP L L S + +D+ Y L+AV+VH+ + GHY+ +
Sbjct: 381 -QGGRYGKLNKRISFPETLDLNPYMSEGGDGSDV-YKLYAVIVHLDMLNASFFGHYICYI 438
Query: 316 KSH-NHWLFFDDENVEMIDESAVQTFFGSAQEYSSNTDHGYILFYESLGAGSNKS 369
K +W DD +E ++ V + Y+L Y + A S+ S
Sbjct: 439 KDFCGNWYRIDDSEIESVELEDVL------------SQRAYMLLYSRIQARSSSS 481
>sp|Q4R6D3|UBP50_MACFA Putative ubiquitin carboxyl-terminal hydrolase 50 OS=Macaca
fascicularis GN=USP50 PE=2 SV=1
Length = 373
Score = 117 bits (293), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 107/358 (29%), Positives = 162/358 (45%), Gaps = 37/358 (10%)
Query: 8 LEKALGDQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNNKNLGDAEEN 67
+++A G Q P + GL N GNTCY N++LQ L P L++Y+ + K + + +
Sbjct: 30 VKEADGSQ-PCSQGVTGLRNLGNTCYMNAILQCLCSISP----LVEYFLSGKYITALQND 84
Query: 68 ---LLTCLADLFTQIRAQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNEL 124
+ T A L T + + ++P+ F L F QDA EFL ++LNEL
Sbjct: 85 CSEVATAFAYLMTDMWL--GDSDCVSPEIFRSALGNLYPAFTKKTQQDAQEFLIYVLNEL 142
Query: 125 VDILEKEEAAKSDPESSSPSEKTANGPTNGLANGVRKEPLVTWVHKNFQGILTNETRCLR 184
+ L+K + +++ + E V + + F+G L CL+
Sbjct: 143 HEALKKYHYPRRRSHEKGSAQRCCR-------KWITTETSV--ITQLFEGQLNYSIVCLK 193
Query: 185 CETVTARDETFFDLSLDI--EQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRM 242
CE T ++E F LSL I E S+ CL+ F +TL ++ C C + QE R
Sbjct: 194 CEKCTYKNEVFTVLSLPIPSEYECSLQDCLQCFFQQDTLTWNNQIHCSFCETKQETAVRA 253
Query: 243 KIKKSPHTLVIHLKRFKYIEQLGRYKKLSYRVVFPLELKLSNTAEDADI-----EYSLFA 297
I K+P ++ HLKRF Q +KL + +PL L T I +Y+L A
Sbjct: 254 GISKAPKIIIFHLKRFDI--QGTTKRKLRTDIHYPLT-NLDLTPYICPIFRKYPKYNLCA 310
Query: 298 VVVHVGSGPNHGHYVSLVKSH--NHWLFFDDENVEMIDESAVQT-----FFGSAQEYS 348
VV H G + GHY + K+ W FDD V I +++VQ F S Q +S
Sbjct: 311 VVNHFGDL-DGGHYTAFCKNSFTQAWYSFDDTRVSEIPDTSVQNATAYLLFYSCQPFS 367
>sp|D3ZU96|UBP42_RAT Ubiquitin carboxyl-terminal hydrolase 42 OS=Rattus norvegicus
GN=Usp42 PE=3 SV=1
Length = 1325
Score = 117 bits (292), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 146/345 (42%), Gaps = 56/345 (16%)
Query: 24 GLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNNKNLGDAEENLLTCLADLFTQI---- 79
GL+N GNTC+ N+ LQ L + P +L + E+ TC A+ F +
Sbjct: 111 GLQNLGNTCFANAALQCLTYTPPLANYMLSH-----------EHSKTCHAEGFCMMCTMQ 159
Query: 80 ----RAQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEKEEAAK 135
+A VI P + +++ FR +DAHEFL + VD ++K
Sbjct: 160 THITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYT----VDAMQK----- 210
Query: 136 SDPESSSPSEKTANGPTNGLANGVRKEPLVTWVHKNFQGILTNETRCLRCETVTARDETF 195
NG +N L + LV + F G L + +CL C+ V+ + +
Sbjct: 211 ----------ACLNG-SNKLDRHTQATTLVCQI---FGGYLRSRVKCLNCKGVSDTFDPY 256
Query: 196 FDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKSPHTLVIHL 255
D++L+I+ S+T L+ F E L+ E+ + C KC + A KR I +S + L I L
Sbjct: 257 LDITLEIKAAQSVTKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTISL 316
Query: 256 KRFKYIEQLGRYKKLSYRVVFPLELKLSNTAEDADIEYSLFAVVVHVGSGPNHGHYVSLV 315
KRF K + Y + +S + I Y L+AV+VH G + GHY +
Sbjct: 317 KRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPII-YVLYAVLVHTGFNCHAGHYFCYI 375
Query: 316 KSHNH-WLFFDDENVEMIDESAVQTFFGSAQEYSSNTDHGYILFY 359
K+ N W +D V D +V Y+LFY
Sbjct: 376 KASNGLWYQMNDSIVSTSDIRSVL------------NQQAYVLFY 408
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 137,367,555
Number of Sequences: 539616
Number of extensions: 5696317
Number of successful extensions: 15256
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 278
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 14051
Number of HSP's gapped (non-prelim): 577
length of query: 369
length of database: 191,569,459
effective HSP length: 119
effective length of query: 250
effective length of database: 127,355,155
effective search space: 31838788750
effective search space used: 31838788750
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)