BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 017548
         (369 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|224066056|ref|XP_002302004.1| predicted protein [Populus trichocarpa]
 gi|222843730|gb|EEE81277.1| predicted protein [Populus trichocarpa]
          Length = 367

 Score =  616 bits (1589), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 288/354 (81%), Positives = 321/354 (90%), Gaps = 5/354 (1%)

Query: 16  SVLASAVAVND-DDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRF 74
           S +AS V+ ND DD +IRQVV SDGE   D LLNAEHHF+ FKSKF KTYATQEEHDYRF
Sbjct: 17  SAVASTVSSNDLDDPLIRQVV-SDGE---DDLLNAEHHFTSFKSKFGKTYATQEEHDYRF 72

Query: 75  RVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPT 134
            VFKANLRRAK+ Q++DPTA HG+TKFSDLTP EFRRQFLGL R LRLP DA KAPILPT
Sbjct: 73  GVFKANLRRAKKHQMIDPTAAHGITKFSDLTPKEFRRQFLGLKRWLRLPTDANKAPILPT 132

Query: 135 NDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDH 194
            DLPTD+DWRDHGAVT VKDQG+CGSCWSFSATGALEGAH+L+TGEL SLSEQQLVDCDH
Sbjct: 133 TDLPTDYDWRDHGAVTEVKDQGSCGSCWSFSATGALEGAHYLATGELASLSEQQLVDCDH 192

Query: 195 ECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVS 254
           ECDPEE G+CDSGC+GGLMN+AFEY LKAGG+ERE+DYPYTGTDGG+CKFDKSK+ A+VS
Sbjct: 193 ECDPEEYGACDSGCDGGLMNNAFEYALKAGGLEREEDYPYTGTDGGTCKFDKSKVVASVS 252

Query: 255 NFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSS 314
           NFSV+S DEDQ+AANLVKHGPL+V INA +MQTY+GGVSCPYIC K  DHGVL+VGYGS+
Sbjct: 253 NFSVVSIDEDQIAANLVKHGPLSVAINAAFMQTYVGGVSCPYICSKRQDHGVLLVGYGSA 312

Query: 315 GFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIHTTS 368
           G+APIRFKEKP+WIIKNSWG+NWGENGYYKIC GRN+CGVDSMVS+VAAIHTT+
Sbjct: 313 GYAPIRFKEKPFWIIKNSWGQNWGENGYYKICRGRNICGVDSMVSTVAAIHTTA 366


>gi|118485796|gb|ABK94746.1| unknown [Populus trichocarpa]
          Length = 367

 Score =  616 bits (1588), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 288/354 (81%), Positives = 320/354 (90%), Gaps = 5/354 (1%)

Query: 16  SVLASAVAVND-DDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRF 74
           S +AS V+ ND DD +IRQVV SDGE   D LLNAEHHF+ FKSKF KTYATQEEHDYRF
Sbjct: 17  SAVASTVSSNDLDDPLIRQVV-SDGE---DDLLNAEHHFTSFKSKFGKTYATQEEHDYRF 72

Query: 75  RVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPT 134
            VFKANLRRAK+ Q++DPTA HG+TKFSDLTP EFRRQFLGL R LRLP DA KAPILPT
Sbjct: 73  GVFKANLRRAKKHQMIDPTAAHGITKFSDLTPKEFRRQFLGLKRWLRLPTDANKAPILPT 132

Query: 135 NDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDH 194
            DLPTD+DWRDHGAVT VKDQG+CGSCWSFSATGALEGAH+L+TGEL SLSEQQLVDCDH
Sbjct: 133 TDLPTDYDWRDHGAVTEVKDQGSCGSCWSFSATGALEGAHYLATGELASLSEQQLVDCDH 192

Query: 195 ECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVS 254
           ECDPEE G+CDSGC+GGLMN+AFEY LKAGG+ERE DYPYTGTDGG+CKFDKSK+ A+VS
Sbjct: 193 ECDPEEYGACDSGCDGGLMNNAFEYALKAGGLEREADYPYTGTDGGTCKFDKSKVVASVS 252

Query: 255 NFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSS 314
           NFSV+S DEDQ+AANLVKHGPL+V INA +MQTY+GGVSCPYIC K  DHGVL+VGYGS+
Sbjct: 253 NFSVVSIDEDQIAANLVKHGPLSVAINAAFMQTYVGGVSCPYICSKRQDHGVLLVGYGSA 312

Query: 315 GFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIHTTS 368
           G+APIRFKEKP+WIIKNSWG+NWGENGYYKIC GRN+CGVDSMVS+VAAIHTT+
Sbjct: 313 GYAPIRFKEKPFWIIKNSWGQNWGENGYYKICRGRNICGVDSMVSTVAAIHTTA 366


>gi|317106675|dbj|BAJ53178.1| JHL18I08.12 [Jatropha curcas]
          Length = 368

 Score =  613 bits (1581), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 287/368 (77%), Positives = 329/368 (89%), Gaps = 5/368 (1%)

Query: 2   ERLILSSLLLLLLSSVLASAVAVND-DDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKF 60
            R ++S L+  LLS  +AS  + ++ DD +IRQVVP DG+Q  DHLLNAEHHF+ FK+KF
Sbjct: 3   RRCLISFLVYALLSFTIASTTSPDELDDPLIRQVVP-DGDQ--DHLLNAEHHFTTFKAKF 59

Query: 61  SKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRL 120
            KTYATQEEHDYRF++FKANLRRA++ Q++DPTAVHGVT FSDLTP EFRRQ+LGL RRL
Sbjct: 60  GKTYATQEEHDYRFKLFKANLRRARKHQMMDPTAVHGVTMFSDLTPREFRRQYLGL-RRL 118

Query: 121 RLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGE 180
           RLPADA +APILPTNDLPTDFDWRDHGAVT VK+QG+CGSCWSFSA GALEGAHFL+TGE
Sbjct: 119 RLPADAHEAPILPTNDLPTDFDWRDHGAVTNVKNQGSCGSCWSFSAAGALEGAHFLATGE 178

Query: 181 LVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGG 240
           LVSLSEQQLVDCDHECDPEE G+CDSGCNGGLM +AFEY LKAGG+ERE+DYPYTG D G
Sbjct: 179 LVSLSEQQLVDCDHECDPEEYGACDSGCNGGLMTTAFEYTLKAGGLEREEDYPYTGNDRG 238

Query: 241 SCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGK 300
            CKFD++KI A+VSNFSV+S DEDQ+AANLVKHGPLAVGINAV+MQTY+GGVSCPYIC K
Sbjct: 239 PCKFDRNKIVASVSNFSVVSIDEDQIAANLVKHGPLAVGINAVFMQTYMGGVSCPYICSK 298

Query: 301 YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSS 360
             DHGVL+VGYGS+G+APIR K+KP+WIIKNSWGE+WGENGYY+IC GRN+CGVD+MVSS
Sbjct: 299 RQDHGVLLVGYGSAGYAPIRLKDKPFWIIKNSWGESWGENGYYRICRGRNICGVDAMVSS 358

Query: 361 VAAIHTTS 368
           VAAIH  S
Sbjct: 359 VAAIHPNS 366


>gi|118489556|gb|ABK96580.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 367

 Score =  613 bits (1581), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 287/354 (81%), Positives = 319/354 (90%), Gaps = 5/354 (1%)

Query: 16  SVLASAVAVND-DDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRF 74
           S +AS V+  D DD +I QVV SDGE   D LLNAEHHF+ FKSKF KTYATQEEHDYRF
Sbjct: 17  SAVASTVSSTDLDDPLIIQVV-SDGE---DDLLNAEHHFTSFKSKFGKTYATQEEHDYRF 72

Query: 75  RVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPT 134
            VFKANLRRAK+ Q++DPTA HGVTKFSDLTP EFRRQFLGL RRLRLP DA KAPILPT
Sbjct: 73  GVFKANLRRAKKHQMIDPTAAHGVTKFSDLTPKEFRRQFLGLKRRLRLPTDANKAPILPT 132

Query: 135 NDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDH 194
            DLPTD+DWRDHGAVT VKDQG+CGSCWSFSATGALEGAH+L+TGEL SLSEQQLVDCDH
Sbjct: 133 TDLPTDYDWRDHGAVTEVKDQGSCGSCWSFSATGALEGAHYLATGELASLSEQQLVDCDH 192

Query: 195 ECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVS 254
           ECDPEE G+CDSGC+GGLMN+AFEY LKAGG+ERE+DYPYTGTDGG+CKFDKSK+ A+VS
Sbjct: 193 ECDPEEYGACDSGCDGGLMNNAFEYALKAGGLEREEDYPYTGTDGGTCKFDKSKVVASVS 252

Query: 255 NFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSS 314
           NFSV+S DEDQ+AANLVKHGPL+V INA +MQTY+GGVSCPYIC K  DHGVL+VGYGS+
Sbjct: 253 NFSVVSIDEDQIAANLVKHGPLSVAINAAFMQTYVGGVSCPYICSKRQDHGVLLVGYGSA 312

Query: 315 GFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIHTTS 368
           G+APIRFKEKP+WIIKNSWG+NWGENGYYKIC GRN+CGVDSMVS+VAAIHT +
Sbjct: 313 GYAPIRFKEKPFWIIKNSWGQNWGENGYYKICRGRNICGVDSMVSTVAAIHTAA 366


>gi|118485910|gb|ABK94801.1| unknown [Populus trichocarpa]
          Length = 367

 Score =  610 bits (1573), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 283/342 (82%), Positives = 313/342 (91%), Gaps = 4/342 (1%)

Query: 27  DDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKR 86
           DD +I QVV SDGE   D LLNAEHHF+ FKSKF KTYATQEEHDYRF VFKANLRRAK+
Sbjct: 29  DDPLIIQVV-SDGE---DDLLNAEHHFTSFKSKFGKTYATQEEHDYRFGVFKANLRRAKK 84

Query: 87  RQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDH 146
            Q++DPTA HGVTKFSDLTP EFRRQFLGL RRLRLP DA KAPILPT DLPTD+DWRDH
Sbjct: 85  HQMIDPTAAHGVTKFSDLTPKEFRRQFLGLKRRLRLPTDANKAPILPTTDLPTDYDWRDH 144

Query: 147 GAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDS 206
           GAVT VKDQG+CGSCWSFSATGALEGAH+L+TGEL SLSEQQLVDCDHECDPEE G+CDS
Sbjct: 145 GAVTEVKDQGSCGSCWSFSATGALEGAHYLATGELASLSEQQLVDCDHECDPEEYGACDS 204

Query: 207 GCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQM 266
           GC+GGLMN+AFEY LKAGG+ERE+DYPYTGTDGG+CKFDKSK+ A+VSNFSV+S DEDQ+
Sbjct: 205 GCDGGLMNNAFEYALKAGGLEREEDYPYTGTDGGTCKFDKSKVVASVSNFSVVSIDEDQI 264

Query: 267 AANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPY 326
           AANLVKHGPL+V INA +MQTY+GGVSCPYIC K  DHGVL+VGYGS+G+APIRFKEKP+
Sbjct: 265 AANLVKHGPLSVAINAAFMQTYVGGVSCPYICSKRQDHGVLLVGYGSAGYAPIRFKEKPF 324

Query: 327 WIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIHTTS 368
           WIIKNSWG+NWGENGYYKIC GRN+CGVDSMVS+VAAIHTT+
Sbjct: 325 WIIKNSWGQNWGENGYYKICRGRNICGVDSMVSTVAAIHTTA 366


>gi|356509908|ref|XP_003523684.1| PREDICTED: cysteine proteinase RD19a-like [Glycine max]
          Length = 366

 Score =  601 bits (1550), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 286/369 (77%), Positives = 325/369 (88%), Gaps = 5/369 (1%)

Query: 1   MERLILSSLLLLLLSSVLASAVAVNDDD-AMIRQVVPSDGEQSEDHLLNAEHHFSLFKSK 59
           M  L +    LLL S+ +A+   ++D+D  +IRQVVP   +  + HLLNAEHHFS FK+K
Sbjct: 1   MANLSILFFGLLLFSAAVATVERIDDEDNLLIRQVVP---DAEDHHLLNAEHHFSAFKTK 57

Query: 60  FSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRR 119
           F+KTYATQEEHD+RFR+FK NL RAK  Q LDP+AVHGVT+FSDLTPSEFR QFLGL + 
Sbjct: 58  FAKTYATQEEHDHRFRIFKNNLLRAKSHQKLDPSAVHGVTRFSDLTPSEFRGQFLGL-KP 116

Query: 120 LRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTG 179
           LRLP+DAQKAPILPT+DLPTDFDWRDHGAVTGVK+QG+CGSCWSFSA GALEGAHFLSTG
Sbjct: 117 LRLPSDAQKAPILPTSDLPTDFDWRDHGAVTGVKNQGSCGSCWSFSAVGALEGAHFLSTG 176

Query: 180 ELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDG 239
            LVSLSEQQLVDCDHECDPEE G+CDSGCNGGLM +AFEY LKAGG+ RE+DYPYTG D 
Sbjct: 177 GLVSLSEQQLVDCDHECDPEERGACDSGCNGGLMTTAFEYTLKAGGLMREEDYPYTGRDR 236

Query: 240 GSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICG 299
           G CKFDKSKIAA+V+NFSV+S DE+Q+AANLVK+GPLAVGINAV+MQTYIGGVSCPYICG
Sbjct: 237 GPCKFDKSKIAASVANFSVVSLDEEQIAANLVKNGPLAVGINAVFMQTYIGGVSCPYICG 296

Query: 300 KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVS 359
           K+LDHGVL+VGYGS  +APIRFKEKPYWIIKNSWGE+WGE GYYKIC GRNVCGVDSMVS
Sbjct: 297 KHLDHGVLLVGYGSGAYAPIRFKEKPYWIIKNSWGESWGEEGYYKICRGRNVCGVDSMVS 356

Query: 360 SVAAIHTTS 368
           +VAAIH ++
Sbjct: 357 TVAAIHVSN 365


>gi|359806140|ref|NP_001241450.1| uncharacterized protein LOC100778716 precursor [Glycine max]
 gi|255639509|gb|ACU20049.1| unknown [Glycine max]
          Length = 366

 Score =  600 bits (1548), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 281/355 (79%), Positives = 321/355 (90%), Gaps = 5/355 (1%)

Query: 16  SVLASAVAVND-DDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRF 74
           + +A+A  ++D DD +IRQVVP   +  + HLLNAEHHFS FK+KF KTYATQEEHD+RF
Sbjct: 16  ATVAAAERIDDEDDLLIRQVVP---DAEDHHLLNAEHHFSAFKTKFGKTYATQEEHDHRF 72

Query: 75  RVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPT 134
           R+FK NL RAK  Q LDP+AVHGVT+FSDLTP+EFRRQFLGL + LRLP+DAQKAPILPT
Sbjct: 73  RIFKNNLLRAKSHQKLDPSAVHGVTRFSDLTPAEFRRQFLGL-KPLRLPSDAQKAPILPT 131

Query: 135 NDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDH 194
           NDLPTDFDWR+HGAVTGVK+QG+CGSCWSFSA GALEGAHFLSTGELVSLSEQQLVDCDH
Sbjct: 132 NDLPTDFDWREHGAVTGVKNQGSCGSCWSFSAVGALEGAHFLSTGELVSLSEQQLVDCDH 191

Query: 195 ECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVS 254
           ECDPEE G+CDSGCNGGLM +AFEY L+AGG+ REKDYPYTG D G CKFDKSK+AA+V+
Sbjct: 192 ECDPEERGACDSGCNGGLMTTAFEYTLQAGGLMREKDYPYTGRDRGPCKFDKSKVAASVA 251

Query: 255 NFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSS 314
           NFSV+S DE+Q+AANLV++GPLAVGINAV+MQTYIGGVSCPYICGK+LDHGVL+VGYGS 
Sbjct: 252 NFSVVSLDEEQIAANLVQNGPLAVGINAVFMQTYIGGVSCPYICGKHLDHGVLLVGYGSG 311

Query: 315 GFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIHTTSS 369
            +APIRFKEKPYWIIKNSWGE+WGE GYYKIC GRNVCGVDSMVS+VAAIH +++
Sbjct: 312 AYAPIRFKEKPYWIIKNSWGESWGEEGYYKICRGRNVCGVDSMVSTVAAIHVSNN 366


>gi|255538808|ref|XP_002510469.1| cysteine protease, putative [Ricinus communis]
 gi|223551170|gb|EEF52656.1| cysteine protease, putative [Ricinus communis]
          Length = 366

 Score =  597 bits (1540), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 278/370 (75%), Positives = 328/370 (88%), Gaps = 7/370 (1%)

Query: 1   MERLILSSLLLL--LLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKS 58
           MER    SL++   L SS+L +A +   DD +IRQVVP      ED+LL+A+HHF+ FK+
Sbjct: 1   MERSCFLSLIVFAFLSSSILFTATSDELDDPLIRQVVPD----VEDYLLSAQHHFTAFKA 56

Query: 59  KFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNR 118
           KF K YATQEEHDYRF+VFKANLRRA++ QL+DP+AVHGVTKFSDLTP EFRRQ+LGL +
Sbjct: 57  KFGKNYATQEEHDYRFKVFKANLRRAQKHQLMDPSAVHGVTKFSDLTPREFRRQYLGL-K 115

Query: 119 RLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLST 178
           +LRLPADA +APILPT+ +P DFDWRDHGAVT VK+QG+CGSCWSFSA GALEGAHFL+T
Sbjct: 116 KLRLPADAHEAPILPTDGIPEDFDWRDHGAVTNVKNQGSCGSCWSFSAAGALEGAHFLAT 175

Query: 179 GELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTD 238
           GELVSLSEQQLVDCDHECDP E G+CDSGCNGGLM +AFEYILKAGG+ERE+DYPYTG+D
Sbjct: 176 GELVSLSEQQLVDCDHECDPTEYGACDSGCNGGLMTNAFEYILKAGGLEREEDYPYTGSD 235

Query: 239 GGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYIC 298
            G CKF+++KIAA+V+NFSV+S DEDQ+AANLV++GPLAVGINAV+MQTYIGGVSCPYIC
Sbjct: 236 RGPCKFERAKIAASVNNFSVVSVDEDQIAANLVQNGPLAVGINAVFMQTYIGGVSCPYIC 295

Query: 299 GKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMV 358
            K  DHGV++VGYGS+G+AP+R K+KP+WIIKNSWGENWGENGYYKIC GRNVCGVD+MV
Sbjct: 296 SKRQDHGVVLVGYGSAGYAPVRLKDKPFWIIKNSWGENWGENGYYKICRGRNVCGVDAMV 355

Query: 359 SSVAAIHTTS 368
           S+VAAIHTT+
Sbjct: 356 STVAAIHTTA 365


>gi|225427714|ref|XP_002264345.1| PREDICTED: cysteine proteinase RD19a [Vitis vinifera]
          Length = 377

 Score =  588 bits (1516), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 275/349 (78%), Positives = 315/349 (90%), Gaps = 5/349 (1%)

Query: 25  NDDDAMIRQVVPSDGE---QSEDHLLNAEHH-FSLFKSKFSKTYATQEEHDYRFRVFKAN 80
           +DDD +IRQVVP  G+     E++LL A+HH FS+FK +F K+YA+QEEHDYRF+VFKAN
Sbjct: 30  SDDDIIIRQVVPELGDVEGSEEENLLTADHHHFSIFKRRFGKSYASQEEHDYRFKVFKAN 89

Query: 81  LRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTD 140
           LRRA+R Q LDP+A HGVT+FSDLTP+EFR  +LGL R L+LP DAQKAPILPTNDLP D
Sbjct: 90  LRRARRHQQLDPSATHGVTQFSDLTPAEFRGTYLGL-RPLKLPHDAQKAPILPTNDLPED 148

Query: 141 FDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEE 200
           FDWRDHGAVT VK+QG+CGSCWSFS TGALEGA+FL+TG LVSLSEQQLV+CDHECDPEE
Sbjct: 149 FDWRDHGAVTAVKNQGSCGSCWSFSTTGALEGANFLATGNLVSLSEQQLVECDHECDPEE 208

Query: 201 SGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVIS 260
            GSCDSGCNGGLMN+AFEY LKAGG+ +E+DYPYTGTD GSCKFDK+KIAA+VSNFSVIS
Sbjct: 209 MGSCDSGCNGGLMNTAFEYTLKAGGLMKEEDYPYTGTDRGSCKFDKTKIAASVSNFSVIS 268

Query: 261 SDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIR 320
            DEDQ+AANLVK+GPLAV INAV+MQTY+GGVSCPYIC K LDHGVL+VGYGS+G+APIR
Sbjct: 269 LDEDQIAANLVKNGPLAVAINAVFMQTYVGGVSCPYICSKRLDHGVLLVGYGSAGYAPIR 328

Query: 321 FKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIHTTSS 369
            K+KPYWIIKNSWGENWGENG+YKIC GRNVCGVDSMVS+VAA+HTTS+
Sbjct: 329 MKDKPYWIIKNSWGENWGENGFYKICRGRNVCGVDSMVSTVAAVHTTSN 377


>gi|161778780|gb|ABX79341.1| cysteine protease [Vitis vinifera]
          Length = 377

 Score =  586 bits (1510), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 275/349 (78%), Positives = 314/349 (89%), Gaps = 5/349 (1%)

Query: 25  NDDDAMIRQVVPSDGE---QSEDHLLNAEHH-FSLFKSKFSKTYATQEEHDYRFRVFKAN 80
           +DDD +IRQVVP  G+     E++LL A+HH FS+FK +F K+YA+QEEHDYRF+VFKAN
Sbjct: 30  SDDDIIIRQVVPELGDVEGGEEENLLTADHHHFSIFKRRFGKSYASQEEHDYRFKVFKAN 89

Query: 81  LRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTD 140
           LRRA+R Q LDP+A HGVT+FSDLTP+EFR  +LGL R L+LP DAQKAPILPTNDLP D
Sbjct: 90  LRRARRHQQLDPSATHGVTQFSDLTPAEFRGTYLGL-RPLKLPHDAQKAPILPTNDLPED 148

Query: 141 FDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEE 200
           FDWRDHGAVT VK+QG+CGSCWSFS TGALEGA+FL+TG LVSLSEQQLV+CDHECDPEE
Sbjct: 149 FDWRDHGAVTAVKNQGSCGSCWSFSTTGALEGANFLATGNLVSLSEQQLVECDHECDPEE 208

Query: 201 SGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVIS 260
            GSCDSGCNGGLMN+AFEY LKAGG+ +E+DYPYTGTD GSCKFDK+KIAA+VSNFSVIS
Sbjct: 209 MGSCDSGCNGGLMNTAFEYTLKAGGLMKEEDYPYTGTDRGSCKFDKTKIAASVSNFSVIS 268

Query: 261 SDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIR 320
            DEDQ+AANLVK GPLAV INAV+MQTY+GGVSCPYIC K LDHGVL+VGYGS+G+APIR
Sbjct: 269 LDEDQIAANLVKIGPLAVAINAVFMQTYVGGVSCPYICSKRLDHGVLLVGYGSAGYAPIR 328

Query: 321 FKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIHTTSS 369
            K+KPYWIIKNSWGENWGENG+YKIC GRNVCGVDSMVS+VAA+HTTS+
Sbjct: 329 MKDKPYWIIKNSWGENWGENGFYKICRGRNVCGVDSMVSTVAAVHTTSN 377


>gi|7381219|gb|AAF61440.1|AF138264_1 papain-like cysteine proteinase isoform I [Ipomoea batatas]
          Length = 368

 Score =  585 bits (1508), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 278/368 (75%), Positives = 318/368 (86%), Gaps = 5/368 (1%)

Query: 3   RLILSSLLLLLLSSVLASAVAVND-DDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFS 61
           R  L  L  LL ++ L  A   +D DD +IRQVV  DG+     LLNA+HHF++FK +F 
Sbjct: 4   RFSLLFLCTLLATTSLVFAAEDDDGDDVLIRQVV-GDGDGD---LLNADHHFTVFKRRFG 59

Query: 62  KTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLR 121
           K YA+ EEHDYR  VFKAN+RRAKR Q LDP AVHGVT+FSDLTP+EFRR+FLGLNRRL+
Sbjct: 60  KAYASDEEHDYRLSVFKANMRRAKRHQELDPAAVHGVTQFSDLTPTEFRRKFLGLNRRLK 119

Query: 122 LPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGEL 181
            PADA+ APILPT++LP+DFDWRDHGAVT VK+QG CGSCWSFS TGALEGA+FL+TG+L
Sbjct: 120 FPADAKTAPILPTDELPSDFDWRDHGAVTPVKNQGTCGSCWSFSTTGALEGANFLATGKL 179

Query: 182 VSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGS 241
           VSLSEQQLVDCDHECDPEE+GSCDSGCNGGLMNSAFEY LKAGG+ RE+DYPYTG D   
Sbjct: 180 VSLSEQQLVDCDHECDPEEAGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGNDLQV 239

Query: 242 CKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKY 301
           C+FDK+KIAA V+NFSV+S DEDQ+AANLVK+GPLAV INAV+MQTYIGGVSCPYIC K 
Sbjct: 240 CRFDKTKIAAKVANFSVVSLDEDQIAANLVKNGPLAVAINAVFMQTYIGGVSCPYICSKR 299

Query: 302 LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSV 361
           LDHGVL+VGYGS+G+APIR KEKPYWIIKNSWGE+WGENGYYKIC GRNVCGVDSMVS+V
Sbjct: 300 LDHGVLLVGYGSAGYAPIRMKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTV 359

Query: 362 AAIHTTSS 369
           AA+ TT+S
Sbjct: 360 AAVSTTTS 367


>gi|356553413|ref|XP_003545051.1| PREDICTED: cysteine proteinase 15A-like [Glycine max]
          Length = 367

 Score =  585 bits (1507), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 275/346 (79%), Positives = 308/346 (89%), Gaps = 6/346 (1%)

Query: 27  DDAMIRQVVP----SDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLR 82
           DD +IRQVVP       E+ EDHLLNAEHHF+ FK+KF K YAT+EEHD RF VFK+NLR
Sbjct: 23  DDILIRQVVPDAVGEAAEKEEDHLLNAEHHFASFKAKFGKKYATKEEHDRRFGVFKSNLR 82

Query: 83  RAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFD 142
           RA+    LDP+AVHGVTKFSDLTP+EFRRQFLG  + LRLPA+AQKAPILPT DLP DFD
Sbjct: 83  RARLHAKLDPSAVHGVTKFSDLTPAEFRRQFLGF-KPLRLPANAQKAPILPTKDLPKDFD 141

Query: 143 WRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESG 202
           WRD GAVT VKDQGACGSCWSFS TGALEGAH+L+TGELVSLSEQQLVDCDH CDPEE G
Sbjct: 142 WRDKGAVTNVKDQGACGSCWSFSTTGALEGAHYLATGELVSLSEQQLVDCDHVCDPEEYG 201

Query: 203 SCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSD 262
           +CDSGCNGGLMN+AFEYIL++GGV++EKDYPYTG DG +CKFDK+K+AA VSN+SV+S D
Sbjct: 202 ACDSGCNGGLMNNAFEYILQSGGVQKEKDYPYTGRDG-TCKFDKTKVAATVSNYSVVSLD 260

Query: 263 EDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFK 322
           EDQ+AANLVK+GPLAVGINAV+MQTYIGGVSCPYICGK+LDHGVLIVGYG   +APIRFK
Sbjct: 261 EDQIAANLVKNGPLAVGINAVFMQTYIGGVSCPYICGKHLDHGVLIVGYGEGAYAPIRFK 320

Query: 323 EKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIHTTS 368
            KPYWIIKNSWGE+WGENGYYKIC GRNVCGVDSMVS+VAAI+ +S
Sbjct: 321 NKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAAIYPSS 366


>gi|7381221|gb|AAF61441.1|AF138265_1 papain-like cysteine proteinase isoform II [Ipomoea batatas]
          Length = 366

 Score =  585 bits (1507), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 274/367 (74%), Positives = 316/367 (86%), Gaps = 5/367 (1%)

Query: 3   RLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSK 62
           R  L  L  LL ++ L  A   + DD +IRQVV   G+     LLNA+HHF++FK +F K
Sbjct: 4   RFSLLFLCTLLATTYLVFAAEDDGDDILIRQVVGDGGD-----LLNADHHFTVFKRRFGK 58

Query: 63  TYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRL 122
            YA+ EEHDYR  VFKAN+RRAK+ Q LDP AVHGVT+FSDLTP+EFRR+FLGLNRRL+ 
Sbjct: 59  VYASDEEHDYRLSVFKANMRRAKQHQELDPAAVHGVTQFSDLTPTEFRRKFLGLNRRLKF 118

Query: 123 PADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELV 182
           PADA+ APILPT++LP+DFDWRDHGAVT VK+QG CGSCWSFS TGALEGA+FL+TG+LV
Sbjct: 119 PADAKTAPILPTDELPSDFDWRDHGAVTPVKNQGTCGSCWSFSTTGALEGANFLATGKLV 178

Query: 183 SLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSC 242
           SLSEQQLVDCDHECDPEE+GSCDSGCNGGLMNSAFEY LKAGG+ RE+DYPYTG D   C
Sbjct: 179 SLSEQQLVDCDHECDPEEAGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGNDLQVC 238

Query: 243 KFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYL 302
           +FDK+KIAA V+NFSV+S DEDQ+AANLVK+GPLAV INAV++QTYIGGVSCPYIC K L
Sbjct: 239 RFDKTKIAAKVANFSVVSLDEDQIAANLVKNGPLAVAINAVFVQTYIGGVSCPYICSKRL 298

Query: 303 DHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVA 362
           DHGVL+VGYGS+G+APIR KEKPYWIIKNSWGE+WGENGYYKIC GRNVCGVDSMVS+VA
Sbjct: 299 DHGVLLVGYGSAGYAPIRMKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVA 358

Query: 363 AIHTTSS 369
           A+ TT+S
Sbjct: 359 AVSTTTS 365


>gi|7211741|gb|AAF40414.1|AF216783_1 papain-like cysteine proteinase isoform I [Ipomoea batatas]
          Length = 368

 Score =  585 bits (1507), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 278/368 (75%), Positives = 318/368 (86%), Gaps = 5/368 (1%)

Query: 3   RLILSSLLLLLLSSVLASAVAVND-DDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFS 61
           R  L  L  LL ++ L  A   +D DD +IRQVV  DG+     LLNA+HHF++FK +F 
Sbjct: 4   RFSLLFLCTLLATTSLVFAAEDDDGDDILIRQVV-GDGDGD---LLNADHHFTVFKRRFG 59

Query: 62  KTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLR 121
           K YA+ EEHDYR  VFKAN+RRAKR Q LDP AVHGVT+FSDLTP+EFRR+FLGLNRRL+
Sbjct: 60  KAYASDEEHDYRLSVFKANMRRAKRHQELDPAAVHGVTQFSDLTPTEFRRKFLGLNRRLK 119

Query: 122 LPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGEL 181
            PADA+ APILPT++LP+DFDWRDHGAVT VK+QG CGSCWSFS TGALEGA+FL+TG+L
Sbjct: 120 FPADAKTAPILPTDELPSDFDWRDHGAVTPVKNQGTCGSCWSFSTTGALEGANFLATGKL 179

Query: 182 VSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGS 241
           VSLSEQQLVDCDHECDPEE+GSCDSGCNGGLMNSAFEY LKAGG+ RE+DYPYTG D   
Sbjct: 180 VSLSEQQLVDCDHECDPEEAGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGNDLQV 239

Query: 242 CKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKY 301
           C+FDK+KIAA V+NFSV+S DEDQ+AANLVK+GPLAV INAV+MQTYIGGVSCPYIC K 
Sbjct: 240 CRFDKTKIAAKVANFSVVSLDEDQIAANLVKNGPLAVAINAVFMQTYIGGVSCPYICSKR 299

Query: 302 LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSV 361
           LDHGVL+VGYGS+G+APIR KEKPYWIIKNSWGE+WGENGYYKIC GRNVCGVDSMVS+V
Sbjct: 300 LDHGVLLVGYGSAGYAPIRMKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTV 359

Query: 362 AAIHTTSS 369
           AA+ TT+S
Sbjct: 360 AAVSTTTS 367


>gi|2511691|emb|CAB17075.1| cysteine proteinase precursor [Phaseolus vulgaris]
          Length = 365

 Score =  583 bits (1503), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 276/346 (79%), Positives = 311/346 (89%), Gaps = 4/346 (1%)

Query: 23  AVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLR 82
           + + DD +IRQVVP +GE  EDHLLNAEHHFS FKSKF KTYAT+EEHD+RF VFK+N+R
Sbjct: 23  STDADDILIRQVVP-EGE-VEDHLLNAEHHFSTFKSKFGKTYATKEEHDHRFGVFKSNMR 80

Query: 83  RAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFD 142
           RA+    LDP+AVHGVTKFSDLTP+EF R+FLGL + LRLPA AQKAPILPTN+LP DFD
Sbjct: 81  RARLHAQLDPSAVHGVTKFSDLTPAEFHRKFLGL-KPLRLPAHAQKAPILPTNNLPKDFD 139

Query: 143 WRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESG 202
           WRD GAVT VKDQG+CGSCWSFS TGALEGAHFL+TGELVSLSEQQLVDCDH CDPEE G
Sbjct: 140 WRDKGAVTNVKDQGSCGSCWSFSTTGALEGAHFLATGELVSLSEQQLVDCDHVCDPEEYG 199

Query: 203 SCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSD 262
           SCDSGCNGGLMN+AFEY++ +GGV+REKDYPYTG DG +CKFDKSKIAA+VSN+SVIS D
Sbjct: 200 SCDSGCNGGLMNNAFEYLIGSGGVQREKDYPYTGRDG-TCKFDKSKIAASVSNYSVISLD 258

Query: 263 EDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFK 322
           E+Q+AANLVK+GPLAV INAV+MQTY+GGVSCPYICGK+LDHGVL+VGYG   +APIRFK
Sbjct: 259 EEQIAANLVKNGPLAVAINAVYMQTYVGGVSCPYICGKHLDHGVLLVGYGEGAYAPIRFK 318

Query: 323 EKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIHTTS 368
           EKPYWIIKNSWGENWG NGYYKIC GRNVCGVDSMVS+V AIH ++
Sbjct: 319 EKPYWIIKNSWGENWGGNGYYKICRGRNVCGVDSMVSTVGAIHAST 364


>gi|449464688|ref|XP_004150061.1| PREDICTED: cysteine proteinase RD19a-like [Cucumis sativus]
 gi|449519862|ref|XP_004166953.1| PREDICTED: cysteine proteinase RD19a-like [Cucumis sativus]
          Length = 377

 Score =  582 bits (1501), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 275/371 (74%), Positives = 324/371 (87%), Gaps = 11/371 (2%)

Query: 10  LLLLLSSVLASAVAV------NDDDAMIRQVVP----SDGEQSEDHLLNAEHHFSLFKSK 59
           L+++LS + ASA+        +D D +IRQVV     ++G   +D LL A+HHFS+FK K
Sbjct: 7   LIVVLSLLAASAIGSEVISGESDGDFIIRQVVDDGGVNEGSNGDDLLLGADHHFSVFKQK 66

Query: 60  FSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGL-NR 118
           F K+YA++EEHD+RFRVFKANL+RA+R Q LDP+A HGVT+FSDLTPSEFRR FLGL +R
Sbjct: 67  FGKSYASKEEHDHRFRVFKANLKRAQRHQALDPSATHGVTQFSDLTPSEFRRSFLGLRSR 126

Query: 119 RLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLST 178
           RL LPADA KAPILPT+ LPTDFDWRD GAV+ VK+QG+CGSCWSFSATGALEGA+FL+T
Sbjct: 127 RLGLPADANKAPILPTDGLPTDFDWRDKGAVSEVKNQGSCGSCWSFSATGALEGANFLAT 186

Query: 179 GELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTD 238
           G+LVSLSEQQLVDCDHECDPEE GSCDSGCNGGLMNSAFEY LK+GG+ +E+DYPYTGTD
Sbjct: 187 GKLVSLSEQQLVDCDHECDPEEKGSCDSGCNGGLMNSAFEYTLKSGGLMKEQDYPYTGTD 246

Query: 239 GGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYIC 298
            G+CKFDKSKIAA+V+NFSV+S DE+Q+AANLVK+GPLAV INAV+MQTYI GVSCPYIC
Sbjct: 247 RGTCKFDKSKIAASVANFSVVSLDEEQIAANLVKNGPLAVAINAVFMQTYIKGVSCPYIC 306

Query: 299 GKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMV 358
            K+LDHGVL+VGYGS G+APIR K+KPYWIIKNSWG NWGENGYYKIC GRN+CGVDSMV
Sbjct: 307 SKHLDHGVLLVGYGSDGYAPIRLKDKPYWIIKNSWGANWGENGYYKICRGRNICGVDSMV 366

Query: 359 SSVAAIHTTSS 369
           S+VAA+HT ++
Sbjct: 367 STVAAVHTAAN 377


>gi|224082940|ref|XP_002306900.1| predicted protein [Populus trichocarpa]
 gi|118481986|gb|ABK92924.1| unknown [Populus trichocarpa]
 gi|222856349|gb|EEE93896.1| predicted protein [Populus trichocarpa]
          Length = 367

 Score =  582 bits (1501), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 280/342 (81%), Positives = 310/342 (90%), Gaps = 4/342 (1%)

Query: 27  DDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKR 86
           DD +IRQVV     + EDHLLNAEHHF+ FKSKF K YATQEEHDYRF VFKANL RAK+
Sbjct: 29  DDPLIRQVV----SEGEDHLLNAEHHFTTFKSKFGKNYATQEEHDYRFSVFKANLLRAKK 84

Query: 87  RQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDH 146
            Q++DPTA HGVTKFSDLTP EFRRQ LGL RRLRLP DA KAPILPT DLPTDFDWRDH
Sbjct: 85  HQIMDPTAAHGVTKFSDLTPKEFRRQLLGLKRRLRLPTDANKAPILPTGDLPTDFDWRDH 144

Query: 147 GAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDS 206
           GAVT VKDQG+CGSCWSFSATGALEGAH+L+TGELVSLSEQQLVDCDHECDPEE G+CDS
Sbjct: 145 GAVTSVKDQGSCGSCWSFSATGALEGAHYLATGELVSLSEQQLVDCDHECDPEEYGACDS 204

Query: 207 GCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQM 266
           GC+GGLMN+AFEY LKAGG+EREKDYPYTG D G+CKF+KSK+AA+VSNFSV+S DEDQ+
Sbjct: 205 GCSGGLMNNAFEYALKAGGLEREKDYPYTGNDRGACKFEKSKVAASVSNFSVVSLDEDQI 264

Query: 267 AANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPY 326
           AANLVKHGPL+V INAV+MQTYIGGVSCPYIC K+ DHGVL+VGYG++G+APIRFKEKP+
Sbjct: 265 AANLVKHGPLSVAINAVFMQTYIGGVSCPYICSKHQDHGVLLVGYGAAGYAPIRFKEKPF 324

Query: 327 WIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIHTTS 368
           WIIKNSWGENWGENGYYKIC  RN+CGVDSMVS+VAAIH T+
Sbjct: 325 WIIKNSWGENWGENGYYKICRARNICGVDSMVSTVAAIHATA 366


>gi|113208365|dbj|BAF03553.1| cysteine proteinase CP2 [Phaseolus vulgaris]
          Length = 365

 Score =  581 bits (1498), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 274/339 (80%), Positives = 308/339 (90%), Gaps = 4/339 (1%)

Query: 30  MIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQL 89
           +IRQVVP +GE  EDHLLNAEHHFS FK+KF KTYAT+EEHD+RF VFK+N+RRA+    
Sbjct: 30  LIRQVVP-EGE-VEDHLLNAEHHFSTFKAKFGKTYATKEEHDHRFGVFKSNMRRARLHAQ 87

Query: 90  LDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAV 149
           LDP+AVHGVTKFSDLTP+EF R+FLGL + LRLPA AQKAPILPTN+LP DFDWRD GAV
Sbjct: 88  LDPSAVHGVTKFSDLTPAEFHRKFLGL-KPLRLPAHAQKAPILPTNNLPKDFDWRDKGAV 146

Query: 150 TGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCN 209
           T VKDQG+CGSCWSFS TGALEGAHFL+TGELVSLSEQQLVDCDH CDPEE GSCDSGCN
Sbjct: 147 TNVKDQGSCGSCWSFSTTGALEGAHFLATGELVSLSEQQLVDCDHVCDPEEYGSCDSGCN 206

Query: 210 GGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAAN 269
           GGLMN+AFEY++ +GGV+REKDYPYTG DG +CKFDKSKIAA+VSN+SVIS DE+Q+AAN
Sbjct: 207 GGLMNNAFEYLIGSGGVQREKDYPYTGRDG-TCKFDKSKIAASVSNYSVISLDEEQIAAN 265

Query: 270 LVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWII 329
           LVK+GPLAV INAV+MQTY+GGVSCPYICGK+LDHGVL+VGYG   +APIRFKEKPYWII
Sbjct: 266 LVKNGPLAVAINAVYMQTYVGGVSCPYICGKHLDHGVLLVGYGEGAYAPIRFKEKPYWII 325

Query: 330 KNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIHTTS 368
           KNSWGENWGENGYYKIC GRNVCGVDSMVS+V AIH ++
Sbjct: 326 KNSWGENWGENGYYKICRGRNVCGVDSMVSTVGAIHAST 364


>gi|5051468|emb|CAB44983.1| putative preprocysteine proteinase [Nicotiana tabacum]
          Length = 363

 Score =  580 bits (1495), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 275/368 (74%), Positives = 315/368 (85%), Gaps = 8/368 (2%)

Query: 1   MERLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKF 60
           MERL L SLL  +L    +SA+A +D+D +IRQVV    E  + HLLNAEHHFSLFKSKF
Sbjct: 1   MERLFLLSLLAFVL---FSSAIAFSDEDPLIRQVV---SETDDSHLLNAEHHFSLFKSKF 54

Query: 61  SKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRL 120
            K YA++EEHD+RF+VFKANLRRA+R QLLDP+A HG+TKFSDLTPSEFRR +LGL++  
Sbjct: 55  GKIYASEEEHDHRFKVFKANLRRARRHQLLDPSAEHGITKFSDLTPSEFRRTYLGLHKP- 113

Query: 121 RLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGE 180
           +   +A+KAPILPT+DLP DFDWRDHGAVTGVK+QG+CGSCWSFS TGA+EGAHFL+TGE
Sbjct: 114 KPKLNAEKAPILPTSDLPADFDWRDHGAVTGVKNQGSCGSCWSFSTTGAVEGAHFLATGE 173

Query: 181 LVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGG 240
           LVSLSEQQLVDCDHECDPE+  +CD+GC GGLM +AFEY LKAGG++ EKDYPYTG DG 
Sbjct: 174 LVSLSEQQLVDCDHECDPEQQDACDAGCGGGLMTTAFEYTLKAGGLQLEKDYPYTGKDG- 232

Query: 241 SCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGK 300
            C FDKSKIAAAV+NFSVI  DEDQ+AANLVKHGPLAVGINA WMQTY+GGVSCP IC K
Sbjct: 233 KCHFDKSKIAAAVTNFSVIGLDEDQIAANLVKHGPLAVGINAAWMQTYVGGVSCPLICFK 292

Query: 301 YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSS 360
             DHGVL+VGYGS GFAPIR KEK YWIIKNSWGENWGE+GYYKIC G N+CGVD+MVS+
Sbjct: 293 RQDHGVLLVGYGSHGFAPIRLKEKAYWIIKNSWGENWGEHGYYKICRGHNICGVDAMVST 352

Query: 361 VAAIHTTS 368
           V A HTT+
Sbjct: 353 VTAAHTTN 360


>gi|225431287|ref|XP_002275759.1| PREDICTED: cysteine proteinase RD19a isoform 1 [Vitis vinifera]
 gi|297735094|emb|CBI17456.3| unnamed protein product [Vitis vinifera]
          Length = 367

 Score =  580 bits (1494), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 275/366 (75%), Positives = 314/366 (85%), Gaps = 11/366 (3%)

Query: 8   SLLLLLLSSVLASAVAVNDDDA-----MIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSK 62
           S LL L+ ++L SA   +         +IRQVVP       D LL+AEH F LFK+KF K
Sbjct: 7   SALLFLIPTLLFSAAVSDISSDESDDLLIRQVVPEG-----DDLLSAEHQFGLFKAKFGK 61

Query: 63  TYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRL 122
           TY+T EEHDYRF VF+ANLRRA+R QLLDP+AVHGVT+FSDLTP EFRR +LGL + LRL
Sbjct: 62  TYSTVEEHDYRFSVFEANLRRARRHQLLDPSAVHGVTRFSDLTPDEFRRDYLGL-KPLRL 120

Query: 123 PADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELV 182
           PADAQKAPILPTNDLPTDFDWRDHGAVT VKDQG+CGSCWSFSA GALEGAHFL+TG L+
Sbjct: 121 PADAQKAPILPTNDLPTDFDWRDHGAVTPVKDQGSCGSCWSFSAIGALEGAHFLTTGNLI 180

Query: 183 SLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSC 242
           S+SEQQLVDCDHECDPEE G+CD GCNGGLM SAFEYILKAGGVERE+ YPY G+D GSC
Sbjct: 181 SMSEQQLVDCDHECDPEEYGACDQGCNGGLMTSAFEYILKAGGVEREETYPYIGSDRGSC 240

Query: 243 KFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYL 302
           KF+KS+I A+VSNFSV+S DEDQ+AAN+VK+GPLAVGINAV+MQTY+ GVSCPYIC + L
Sbjct: 241 KFNKSQIVASVSNFSVVSLDEDQIAANMVKNGPLAVGINAVFMQTYMKGVSCPYICSRNL 300

Query: 303 DHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVA 362
           DHGV++VGYGS+G+APIRFKEKPYWIIKNSWGE+WGE+GYYKIC G N CGVDSMVS+VA
Sbjct: 301 DHGVVLVGYGSAGYAPIRFKEKPYWIIKNSWGESWGEDGYYKICRGHNACGVDSMVSTVA 360

Query: 363 AIHTTS 368
           AI TT+
Sbjct: 361 AIQTTT 366


>gi|7211745|gb|AAF40416.1|AF216785_1 papain-like cysteine proteinase isoform III [Ipomoea batatas]
 gi|7381223|gb|AAF61442.1|AF138266_1 papain-like cysteine proteinase isoform III [Ipomoea batatas]
          Length = 366

 Score =  578 bits (1490), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 269/343 (78%), Positives = 306/343 (89%), Gaps = 4/343 (1%)

Query: 27  DDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKR 86
           DD +IRQVV  DG+     LLNA+HHF++FK +F K YA+ EEHDYR  VFKAN+RRAKR
Sbjct: 27  DDILIRQVV-GDGDGD---LLNADHHFAVFKRRFGKAYASDEEHDYRLSVFKANMRRAKR 82

Query: 87  RQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDH 146
            Q LDP AVHGVT+FSDLTP+EFRR+FLGLNRRL+ PADA+ APILPT++LP+DFDWRD 
Sbjct: 83  HQQLDPAAVHGVTQFSDLTPTEFRRKFLGLNRRLKFPADAKTAPILPTDELPSDFDWRDR 142

Query: 147 GAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDS 206
           GAVT VK+QG CGSCWSFS TGALEGA+FL+TG+LVSLSEQQLVDCDHECDPEE+GSCDS
Sbjct: 143 GAVTPVKNQGTCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEAGSCDS 202

Query: 207 GCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQM 266
           GCNGGLMNSAFEY LKAGG+ RE+DYPYTG D   C+FDK+KIAA V+NFSV+S DEDQ+
Sbjct: 203 GCNGGLMNSAFEYTLKAGGLMREEDYPYTGNDLQVCRFDKTKIAAKVANFSVVSLDEDQI 262

Query: 267 AANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPY 326
           AANLVK+GPLAV INAV+MQTYIGGVSCPYIC K LDHGVL+VGYGS+G+APIR KEKPY
Sbjct: 263 AANLVKNGPLAVAINAVFMQTYIGGVSCPYICSKRLDHGVLLVGYGSAGYAPIRMKEKPY 322

Query: 327 WIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIHTTSS 369
           WIIKNSWGE+WGENGYYKIC GRNVCGVDSMVS+VAA+ TT+S
Sbjct: 323 WIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAAVSTTTS 365


>gi|255543801|ref|XP_002512963.1| cysteine protease, putative [Ricinus communis]
 gi|223547974|gb|EEF49466.1| cysteine protease, putative [Ricinus communis]
          Length = 373

 Score =  578 bits (1489), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 275/366 (75%), Positives = 319/366 (87%), Gaps = 4/366 (1%)

Query: 4   LILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSED-HLLNAEHHFSLFKSKFSK 62
            ++SS+L +  S+V A  +  + +D +IRQV     E S + +LL AEHHFSLFK KF K
Sbjct: 10  FVISSILFV--SAVTAETLTTDGEDPLIRQVTDGQDESSANPNLLGAEHHFSLFKKKFKK 67

Query: 63  TYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRL 122
           TYA+QEEHDYRF++FK+NLRRA+R Q LDPTA HGVT+FSDLT SEFRRQFLGL RRLRL
Sbjct: 68  TYASQEEHDYRFKIFKSNLRRAERHQKLDPTATHGVTQFSDLTHSEFRRQFLGL-RRLRL 126

Query: 123 PADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELV 182
           P DA +AP+LPTNDLP DFDWR+ GAVT VK+QG+CGSCWSFS TGALEGA++L+TG+LV
Sbjct: 127 PKDANEAPMLPTNDLPADFDWREKGAVTAVKNQGSCGSCWSFSTTGALEGANYLATGKLV 186

Query: 183 SLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSC 242
           SLSEQQLVDCDHECDP E G+CDSGCNGGLMNSAFEY LKAGG+ RE+DYPYTGTD G+C
Sbjct: 187 SLSEQQLVDCDHECDPAEEGACDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGAC 246

Query: 243 KFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYL 302
           +FDK+KIAA V+NFSV+S DEDQ+AANLVK+GPLAV INAV+MQTYIGGVSCPYIC K L
Sbjct: 247 QFDKTKIAAKVANFSVVSLDEDQIAANLVKNGPLAVAINAVFMQTYIGGVSCPYICSKRL 306

Query: 303 DHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVA 362
           DHGVL+VGYGS+G+APIR KEKPYWIIKNSWGENWGE+GYYKIC GRN+CGVDSMVS+VA
Sbjct: 307 DHGVLLVGYGSAGYAPIRMKEKPYWIIKNSWGENWGESGYYKICRGRNICGVDSMVSTVA 366

Query: 363 AIHTTS 368
           A+ T S
Sbjct: 367 AVQTAS 372


>gi|28192375|gb|AAK07731.1| CPR2-like cysteine proteinase [Nicotiana tabacum]
          Length = 363

 Score =  577 bits (1488), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 274/368 (74%), Positives = 314/368 (85%), Gaps = 8/368 (2%)

Query: 1   MERLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKF 60
           MERL L SLL  +L    +SA+A +D+D +IRQVV    E  + HLLNAEHHFSLFKSKF
Sbjct: 1   MERLFLLSLLAFVL---FSSAIAFSDEDPLIRQVV---SETDDSHLLNAEHHFSLFKSKF 54

Query: 61  SKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRL 120
            K YA++EEHD+RF+VFKAN RRA+R QLLDP+A HG+TKFSDLTPSEFRR +LGL++  
Sbjct: 55  GKIYASEEEHDHRFKVFKANRRRARRHQLLDPSAEHGITKFSDLTPSEFRRTYLGLHKP- 113

Query: 121 RLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGE 180
           +   +A+KAPILPT+DLP DFDWRDHGAVTGVK+QG+CGSCWSFS TGA+EGAHFL+TGE
Sbjct: 114 KPKLNAEKAPILPTSDLPADFDWRDHGAVTGVKNQGSCGSCWSFSTTGAVEGAHFLATGE 173

Query: 181 LVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGG 240
           LVSLSEQQLVDCDHECDPE+  +CD+GC GGLM +AFEY LKAGG++ EKDYPYTG DG 
Sbjct: 174 LVSLSEQQLVDCDHECDPEQQDACDAGCGGGLMTTAFEYTLKAGGLQLEKDYPYTGKDG- 232

Query: 241 SCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGK 300
            C FDKSKIAAAV+NFSVI  DEDQ+AANLVKHGPLAVGINA WMQTY+GGVSCP IC K
Sbjct: 233 KCHFDKSKIAAAVTNFSVIGLDEDQIAANLVKHGPLAVGINAAWMQTYVGGVSCPLICFK 292

Query: 301 YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSS 360
             DHGVL+VGYGS GFAPIR KEK YWIIKNSWGENWGE+GYYKIC G N+CGVD+MVS+
Sbjct: 293 RQDHGVLLVGYGSHGFAPIRLKEKAYWIIKNSWGENWGEHGYYKICRGHNICGVDAMVST 352

Query: 361 VAAIHTTS 368
           V A HTT+
Sbjct: 353 VTAAHTTN 360


>gi|356564325|ref|XP_003550405.1| PREDICTED: cysteine proteinase 15A [Glycine max]
          Length = 370

 Score =  577 bits (1488), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 270/340 (79%), Positives = 308/340 (90%), Gaps = 3/340 (0%)

Query: 30  MIRQVVPSDGE-QSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQ 88
           +IRQVVP  GE + ED+LLNAEHHF+ FK+KF+KTYAT+EEHD+RF VFK+NLRRA+   
Sbjct: 32  LIRQVVPDVGEAEEEDNLLNAEHHFASFKAKFAKTYATKEEHDHRFGVFKSNLRRARLHA 91

Query: 89  LLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGA 148
            LDP+AVHGVTKFSDLTP+EFRRQFLGL + LR PA AQKAPILPT DLP DFDWRD GA
Sbjct: 92  KLDPSAVHGVTKFSDLTPAEFRRQFLGL-KPLRFPAHAQKAPILPTKDLPKDFDWRDKGA 150

Query: 149 VTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGC 208
           VT VKDQGACGSCWSFS TGALEGAH+L+TGELVSLSEQQLVDCDH CDPEE G+CDSGC
Sbjct: 151 VTNVKDQGACGSCWSFSTTGALEGAHYLATGELVSLSEQQLVDCDHVCDPEEYGACDSGC 210

Query: 209 NGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAA 268
           NGGLMN+AFEYIL++GGV++EKDYPYTG D G+CKFDK+K+AA VSN+SV+S DE+Q+AA
Sbjct: 211 NGGLMNNAFEYILQSGGVQKEKDYPYTGRD-GTCKFDKTKVAATVSNYSVVSLDEEQIAA 269

Query: 269 NLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWI 328
           NLVK+GPLAV INAV+MQTY+GGVSCPYICGK+LDHGVL+VGYG   +APIRFK KPYWI
Sbjct: 270 NLVKNGPLAVAINAVFMQTYVGGVSCPYICGKHLDHGVLLVGYGEGAYAPIRFKNKPYWI 329

Query: 329 IKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIHTTS 368
           IKNSWGE+WGENGYYKIC GRNVCGVDSMVS+VAAI+ +S
Sbjct: 330 IKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAAIYPSS 369


>gi|13491752|gb|AAK27969.1|AF242373_1 cysteine protease [Ipomoea batatas]
          Length = 366

 Score =  577 bits (1487), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 272/367 (74%), Positives = 314/367 (85%), Gaps = 5/367 (1%)

Query: 3   RLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSK 62
           R  L  L  LL ++ L  A   + DD +IRQVV   G+     LLNA+HHF++FK +F K
Sbjct: 4   RFSLLFLCTLLATTYLVFAAEDDGDDILIRQVVGDGGD-----LLNADHHFTVFKRRFGK 58

Query: 63  TYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRL 122
            YA+ EEHDYR   FKAN+RRAK+ Q LDP AVHGVT+FSDLTP+EFRR+FLGLNRRL+ 
Sbjct: 59  VYASDEEHDYRLSEFKANMRRAKQHQELDPAAVHGVTQFSDLTPTEFRRKFLGLNRRLKF 118

Query: 123 PADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELV 182
           PADA+ APILPT++LP+DFDWRDHGAVT VK+QG CGSC SFS TGALEGA+FL+TG+LV
Sbjct: 119 PADAKTAPILPTDELPSDFDWRDHGAVTPVKNQGTCGSCCSFSTTGALEGANFLATGKLV 178

Query: 183 SLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSC 242
           SLSEQQLVDCDHECDPEE+GSCDSGCNGGLMNSAFEY LKAGG+ RE+D+PYTG D   C
Sbjct: 179 SLSEQQLVDCDHECDPEEAGSCDSGCNGGLMNSAFEYTLKAGGLMREEDHPYTGNDLQVC 238

Query: 243 KFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYL 302
           +FDK+KIAA V+NFSV+S DEDQ+AANLVK+GPLAV INAV+MQTYIGGVSCPYIC K L
Sbjct: 239 RFDKTKIAAKVANFSVVSLDEDQIAANLVKNGPLAVAINAVFMQTYIGGVSCPYICSKRL 298

Query: 303 DHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVA 362
           DHGVL+VGYGS+G+APIR KEKPYWIIKNSWGE+WGENGYYKIC GRNVCGVDSMVS+VA
Sbjct: 299 DHGVLLVGYGSAGYAPIRMKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVA 358

Query: 363 AIHTTSS 369
           A+ TT+S
Sbjct: 359 AVSTTTS 365


>gi|124484383|dbj|BAF46302.1| cysteine proteinase precursor [Ipomoea nil]
          Length = 369

 Score =  576 bits (1484), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 272/352 (77%), Positives = 313/352 (88%), Gaps = 11/352 (3%)

Query: 22  VAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANL 81
           V   D+D +IRQVV SDGE  +D LLNA+HHF+LFKSK+ K+YATQEEHDYR  VFKANL
Sbjct: 19  VVRADEDPLIRQVV-SDGE--DDALLNADHHFTLFKSKYGKSYATQEEHDYRLSVFKANL 75

Query: 82  RRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGL------NRRLRLPADAQKAPILPTN 135
           RRAKR QLLDP+AVHGVTKFSDLTP EFRR FLG+       R+L+LPADA  A ILPT+
Sbjct: 76  RRAKRHQLLDPSAVHGVTKFSDLTPKEFRRTFLGIRKSSSGKRKLKLPADAHAAEILPTS 135

Query: 136 DLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHE 195
           DLP+DFDWRD+GAVTGVKDQG+CGSCWSFS TGALEGA+FL+TGELVSLSEQQLVDCDH 
Sbjct: 136 DLPSDFDWRDYGAVTGVKDQGSCGSCWSFSTTGALEGANFLATGELVSLSEQQLVDCDHL 195

Query: 196 CDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSN 255
           CDPEE+G+CDSGCNGGLM +A+EY+L++GG+E+EKDYPYTG D G+CKFDKSKIAAAV+N
Sbjct: 196 CDPEEAGACDSGCNGGLMTTAYEYVLQSGGLEKEKDYPYTGKD-GTCKFDKSKIAAAVAN 254

Query: 256 FSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKY-LDHGVLIVGYGSS 314
           FSV+S DEDQ+AANLVKHGPL+VGINAV+MQTYIGGVSCPYIC K  LDHGVL+VGYG++
Sbjct: 255 FSVVSLDEDQIAANLVKHGPLSVGINAVFMQTYIGGVSCPYICSKRNLDHGVLLVGYGAA 314

Query: 315 GFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIHT 366
           G+APIRFK+KPYWI+KNSWGENWGE GYYKIC G N+CG+DSMVS+V A  T
Sbjct: 315 GYAPIRFKDKPYWIVKNSWGENWGEEGYYKICRGNNICGIDSMVSTVTAAST 366


>gi|356541074|ref|XP_003539008.1| PREDICTED: cysteine proteinase RD19a-like [Glycine max]
          Length = 363

 Score =  575 bits (1482), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 270/368 (73%), Positives = 312/368 (84%), Gaps = 6/368 (1%)

Query: 1   MERLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKF 60
           M    L    L++ S   A++    DD+ +I QVV   G +     L AEHHF  FK +F
Sbjct: 1   MNNPTLIIFFLVIFSVFFAASADGGDDEPLIMQVVEGSGVR-----LGAEHHFLDFKRRF 55

Query: 61  SKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRL 120
            K YA+QEEH+YRF VFKAN+RRA+R Q LDP+A HGVT+FSDLT SEFR + LGL R +
Sbjct: 56  GKAYASQEEHNYRFEVFKANMRRARRHQSLDPSAAHGVTRFSDLTASEFRNKVLGL-RGV 114

Query: 121 RLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGE 180
           RLP++A KAPILPT++LP+DFDWRDHGAVT VK+QG+CGSCWSFS TGALEGAHFLSTGE
Sbjct: 115 RLPSNANKAPILPTDNLPSDFDWRDHGAVTPVKNQGSCGSCWSFSTTGALEGAHFLSTGE 174

Query: 181 LVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGG 240
           LVSLSEQQLVDCDHECDPEE+GSCDSGCNGGLMNSAFEYILK+GGV RE+DYPY+GTD G
Sbjct: 175 LVSLSEQQLVDCDHECDPEEAGSCDSGCNGGLMNSAFEYILKSGGVMREEDYPYSGTDRG 234

Query: 241 SCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGK 300
           +CKFDK+KIAA+V+NFSVIS DEDQ+AANLVK+GPLAV INA +MQTYIGGVSCPYIC +
Sbjct: 235 NCKFDKAKIAASVANFSVISLDEDQIAANLVKNGPLAVAINAAYMQTYIGGVSCPYICSR 294

Query: 301 YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSS 360
            LDHGVL+VGYGS  +APIR KEKP+WIIKNSWGENWGENGYYKIC GRN+CGVDSMVS+
Sbjct: 295 RLDHGVLLVGYGSGAYAPIRMKEKPFWIIKNSWGENWGENGYYKICRGRNICGVDSMVST 354

Query: 361 VAAIHTTS 368
           VAA+HTT+
Sbjct: 355 VAAVHTTT 362


>gi|7211743|gb|AAF40415.1|AF216784_1 papain-like cysteine proteinase isoform II [Ipomoea batatas]
          Length = 368

 Score =  575 bits (1481), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 274/368 (74%), Positives = 314/368 (85%), Gaps = 5/368 (1%)

Query: 3   RLILSSLLLLLLSSVLASAVAVND-DDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFS 61
           R  L  L  LL ++ L  A   +D DD +IRQVV  DG+     LLNA+HHF++FK +F 
Sbjct: 4   RFSLLFLCTLLATTSLVFAAEDDDGDDILIRQVV-GDGDGD---LLNADHHFTVFKRRFG 59

Query: 62  KTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLR 121
           K YA+ EEHDYR  VFKAN+RRAKR Q LDP AVHGVT+FSD TP+EFRR+FLGLNRRL+
Sbjct: 60  KAYASDEEHDYRLSVFKANMRRAKRHQELDPAAVHGVTQFSDSTPTEFRRKFLGLNRRLK 119

Query: 122 LPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGEL 181
            PADA+ APILPT++LP+DFDWRD GAVT VK+QG CG CWSFS TGALEGA+FL+TG+L
Sbjct: 120 FPADAKTAPILPTDELPSDFDWRDRGAVTPVKNQGTCGLCWSFSTTGALEGANFLATGKL 179

Query: 182 VSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGS 241
           VSLSEQQLVDCDHECDPEE+GSCD GCNGGLMNSAFEY LKAGG+ RE+DYPYTG D   
Sbjct: 180 VSLSEQQLVDCDHECDPEEAGSCDFGCNGGLMNSAFEYTLKAGGLMREEDYPYTGNDLQV 239

Query: 242 CKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKY 301
           C+FDK+KIAA V+NFSV+S DEDQ+AANLVK+GPLAV INAV+MQTYIGGVSCPYIC K 
Sbjct: 240 CRFDKTKIAAKVANFSVVSLDEDQIAANLVKNGPLAVAINAVFMQTYIGGVSCPYICSKR 299

Query: 302 LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSV 361
           LDHGVL+VGYGS+G+APIR KEKPYWIIKNSWGE+WGENGYYKIC GRNVCGVDSMVS+V
Sbjct: 300 LDHGVLLVGYGSAGYAPIRMKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTV 359

Query: 362 AAIHTTSS 369
           AA+ TT+S
Sbjct: 360 AAVSTTTS 367


>gi|224077886|ref|XP_002305451.1| predicted protein [Populus trichocarpa]
 gi|222848415|gb|EEE85962.1| predicted protein [Populus trichocarpa]
          Length = 368

 Score =  574 bits (1480), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 272/350 (77%), Positives = 310/350 (88%), Gaps = 5/350 (1%)

Query: 21  AVAVNDDDAMIRQVVPSDGEQ-SEDHLLNAE-HHFSLFKSKFSKTYATQEEHDYRFRVFK 78
           A  +N DD +IR+VV  DG+  S  +LL+AE HHFSLFKSKF K+Y +QEEHDYRF VFK
Sbjct: 21  AETLNGDDPLIREVV--DGQDASSSNLLSAEQHHFSLFKSKFKKSYGSQEEHDYRFSVFK 78

Query: 79  ANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLP 138
           ANLRRA R Q LDPTA HGVT+FSDLTP+EFR+Q LGL RRLRLP DA +APILPT+DLP
Sbjct: 79  ANLRRAARHQELDPTASHGVTQFSDLTPAEFRKQVLGL-RRLRLPKDANEAPILPTSDLP 137

Query: 139 TDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDP 198
            DFDWRD GAV  +K+QG+CGSCWSFSATGALEGAHFL+TGELVSLSEQQLVDCDHECDP
Sbjct: 138 EDFDWRDKGAVGPIKNQGSCGSCWSFSATGALEGAHFLATGELVSLSEQQLVDCDHECDP 197

Query: 199 EESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSV 258
           EE GSCDSGCNGGLMNSAFEY LKAGG+ RE+DYPYTGTD  +CKFDK+K+AA V+NFSV
Sbjct: 198 EEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRDACKFDKNKVAARVANFSV 257

Query: 259 ISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAP 318
           +S DEDQ+AANLVK+GPLAV INAV+MQTYIGGVSCPYIC + LDHGVL+VGYGS+G++P
Sbjct: 258 VSLDEDQIAANLVKNGPLAVAINAVFMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYSP 317

Query: 319 IRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIHTTS 368
           +R KEKP+WIIKNSWGE WGENG+YKIC GRNVCGVDSMVS+VAA+ T+S
Sbjct: 318 VRMKEKPFWIIKNSWGEKWGENGFYKICRGRNVCGVDSMVSTVAAVQTSS 367


>gi|118481169|gb|ABK92536.1| unknown [Populus trichocarpa]
          Length = 368

 Score =  573 bits (1478), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 266/349 (76%), Positives = 301/349 (86%), Gaps = 1/349 (0%)

Query: 20  SAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKA 79
           SA   N DD++IRQVV    E S + L   +HHFSLFK KF K+Y +QEEHDYRF VFK+
Sbjct: 20  SAETFNGDDSLIRQVVEGQDESSSNLLTAEQHHFSLFKRKFKKSYLSQEEHDYRFSVFKS 79

Query: 80  NLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPT 139
           NLRRA R Q LDPTA HGVT+FSDLT +EFR+Q LGL R+LRLP DA  APILPTNDLP 
Sbjct: 80  NLRRAARHQKLDPTASHGVTQFSDLTSAEFRKQVLGL-RKLRLPKDANTAPILPTNDLPE 138

Query: 140 DFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPE 199
           DFDWR+ GAV  VK+QG+CGSCWSFS TGALEGAHFL+TGELVSLSEQQLVDCDHECDPE
Sbjct: 139 DFDWREKGAVGPVKNQGSCGSCWSFSTTGALEGAHFLATGELVSLSEQQLVDCDHECDPE 198

Query: 200 ESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVI 259
           E GSCDSGCNGGLMNSAFEY LKAGG+ RE+DYPYTG D G+CKFDK+K+AA V+NFSV+
Sbjct: 199 EPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGMDRGACKFDKNKVAAGVANFSVV 258

Query: 260 SSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPI 319
           S DEDQ+AANLVK+GPLAV INAV+MQTYIGGVSCPYIC + LDHGVL+VGYGS+ +AP+
Sbjct: 259 SLDEDQIAANLVKNGPLAVAINAVFMQTYIGGVSCPYICSRRLDHGVLLVGYGSAAYAPV 318

Query: 320 RFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIHTTS 368
           R KEKPYWIIKNSWGE+WGENG+YKIC GRN+CGVDSMVS+VAA+ T S
Sbjct: 319 RMKEKPYWIIKNSWGESWGENGFYKICRGRNICGVDSMVSTVAAVQTNS 367


>gi|60396844|gb|AAX19661.1| cysteine proteinase [Populus tomentosa]
          Length = 374

 Score =  573 bits (1478), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 266/349 (76%), Positives = 301/349 (86%), Gaps = 1/349 (0%)

Query: 20  SAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKA 79
           SA   N DD++IRQVV    E S + L   +HH SLFK KF K+Y +QEEHDYRF VFK+
Sbjct: 26  SAETFNGDDSLIRQVVEGQDESSPNLLTAEQHHLSLFKRKFKKSYLSQEEHDYRFSVFKS 85

Query: 80  NLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPT 139
           NLRRA R Q LDPTA HGVT+FSDLT +EFR+Q LGL R+LRLP DA KAPILPTNDLP 
Sbjct: 86  NLRRAARHQKLDPTASHGVTQFSDLTSAEFRKQVLGL-RKLRLPKDANKAPILPTNDLPE 144

Query: 140 DFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPE 199
           DFDWR+ GAV  VK+QG+CGSCWSFS TGALEGAHFL+TGELVSLSEQQLVDCDHECDPE
Sbjct: 145 DFDWREKGAVGPVKNQGSCGSCWSFSTTGALEGAHFLATGELVSLSEQQLVDCDHECDPE 204

Query: 200 ESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVI 259
           E GSCDSGCNGGLMNSAFEY LKAGG+ RE+DYPYTG D G+CKFDK K+AA V+NFSV+
Sbjct: 205 EPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGMDRGACKFDKDKVAAGVANFSVV 264

Query: 260 SSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPI 319
           S DEDQ+AANLVK+GPLAV  NAV+MQTYIGGVSCPYIC + LDHGVL+VGYGS+G+AP+
Sbjct: 265 SLDEDQIAANLVKNGPLAVATNAVFMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPV 324

Query: 320 RFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIHTTS 368
           R KEKPYWIIKNSWGE+WGENG+YKIC GRN+CGVDSMVS+VAA+ T+S
Sbjct: 325 RMKEKPYWIIKNSWGESWGENGFYKICRGRNICGVDSMVSTVAAVQTSS 373


>gi|7242888|dbj|BAA92495.1| cysteine protease [Vigna mungo]
          Length = 364

 Score =  573 bits (1477), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 275/338 (81%), Positives = 304/338 (89%), Gaps = 4/338 (1%)

Query: 30  MIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQL 89
           +IRQVVP +GE  EDHLLNAEHHFS FK+KF KTYAT+EEHD+RF VFK+NLRRA+    
Sbjct: 29  LIRQVVP-EGE-VEDHLLNAEHHFSNFKAKFGKTYATKEEHDHRFGVFKSNLRRARLHAQ 86

Query: 90  LDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAV 149
           LDP+AVHGVTKFSDLT +EF+RQFLGL + L LPA+AQKAPILPTN+LP DFDWRD GAV
Sbjct: 87  LDPSAVHGVTKFSDLTAAEFQRQFLGL-KPLGLPANAQKAPILPTNNLPKDFDWRDKGAV 145

Query: 150 TGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCN 209
           T VKDQGACGSCWSFS TGALEGAHFL+TGELVSLSEQQLVDCDH CDPEE G+CDSGCN
Sbjct: 146 TNVKDQGACGSCWSFSTTGALEGAHFLATGELVSLSEQQLVDCDHVCDPEEYGACDSGCN 205

Query: 210 GGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAAN 269
           GGLMN+AFEYIL AGGV+RE+DYPY G D  SCKFDKSKIAA+V+N+SVIS DEDQ+AAN
Sbjct: 206 GGLMNNAFEYILGAGGVQREEDYPYAGRDS-SCKFDKSKIAASVANYSVISLDEDQIAAN 264

Query: 270 LVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWII 329
           LVK+GPLAVGINAV+MQTYIGGVSCPYIC K LDHGV IVGYG SG+APIRFKEKPYWII
Sbjct: 265 LVKNGPLAVGINAVYMQTYIGGVSCPYICAKRLDHGVQIVGYGESGYAPIRFKEKPYWII 324

Query: 330 KNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIHTT 367
           KNSWGE+WGENGYYKIC G+N CGVDSMVS+V AIH +
Sbjct: 325 KNSWGESWGENGYYKICRGQNACGVDSMVSTVGAIHAS 362


>gi|146215998|gb|ABQ10201.1| cysteine protease Cp3 [Actinidia deliciosa]
          Length = 365

 Score =  572 bits (1475), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 267/351 (76%), Positives = 310/351 (88%), Gaps = 7/351 (1%)

Query: 19  ASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFK 78
           AS  + + +D +I+Q+V  DG    DH L+A+HHF LFK +F K+YATQE+HDYRF VFK
Sbjct: 22  ASGKSSDGEDLVIQQIV--DG----DHPLSADHHFRLFKRRFGKSYATQEDHDYRFSVFK 75

Query: 79  ANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLP 138
            NLRRA+  Q LDP+AVHGVT+FSDLTP+EFRR  LGL +RLR PADA KAPILPT DLP
Sbjct: 76  TNLRRARHHQRLDPSAVHGVTQFSDLTPAEFRRNHLGL-KRLRFPADANKAPILPTEDLP 134

Query: 139 TDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDP 198
            DFDWRDHGAV  VK+QG+CGSCWSFS TGALEGA+FL+TG+LVSLSEQQLVDCDHECDP
Sbjct: 135 ADFDWRDHGAVASVKNQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDP 194

Query: 199 EESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSV 258
           EE GSCDSGCNGGLMNSA EY LKAGG+ RE+DYPY+GTD G+CKFD++KIAA+V+NFSV
Sbjct: 195 EEPGSCDSGCNGGLMNSALEYTLKAGGLMREEDYPYSGTDRGTCKFDETKIAASVANFSV 254

Query: 259 ISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAP 318
           +S DE+Q+AANLVK+GPLAV INAV+MQTY+GGVSCPYIC K LDHGVL+VGYGS+G+AP
Sbjct: 255 VSLDENQIAANLVKNGPLAVAINAVFMQTYVGGVSCPYICSKRLDHGVLLVGYGSAGYAP 314

Query: 319 IRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIHTTSS 369
           IR KEKPYWIIKNSWGE+WGENG+YKIC GRNVCGVDSMVS+VAA+HTTS+
Sbjct: 315 IRMKEKPYWIIKNSWGESWGENGFYKICQGRNVCGVDSMVSTVAAVHTTSN 365


>gi|224105327|ref|XP_002313770.1| predicted protein [Populus trichocarpa]
 gi|222850178|gb|EEE87725.1| predicted protein [Populus trichocarpa]
          Length = 368

 Score =  572 bits (1473), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 265/349 (75%), Positives = 300/349 (85%), Gaps = 1/349 (0%)

Query: 20  SAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKA 79
           SA   N DD++IRQVV    E S + L   +HHFSLFK KF K+Y +QEEHDYRF VFK+
Sbjct: 20  SAETFNGDDSLIRQVVEGQDESSSNLLTAEQHHFSLFKRKFKKSYLSQEEHDYRFSVFKS 79

Query: 80  NLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPT 139
           NLRRA R Q LDPTA HGVT+FSDLT +EFR+Q LGL R+LRLP DA  APILPTNDLP 
Sbjct: 80  NLRRAARHQKLDPTASHGVTQFSDLTSAEFRKQVLGL-RKLRLPKDANTAPILPTNDLPE 138

Query: 140 DFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPE 199
           DFDWR+ GAV  VK+QG+CGSCWSFS TGALEGAHFL+TGELVSLSEQQLVDCDHECDPE
Sbjct: 139 DFDWREKGAVGPVKNQGSCGSCWSFSTTGALEGAHFLATGELVSLSEQQLVDCDHECDPE 198

Query: 200 ESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVI 259
           E GSCDSGCNGGLMNSAFEY LKAGG+ RE+DYPYTG D G+CKFDK+K+AA V+NFS +
Sbjct: 199 EPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGMDRGACKFDKNKVAAGVANFSAV 258

Query: 260 SSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPI 319
           S DEDQ+AANLVK+GPLAV INAV+MQTYIGGVSCPYIC + LDHGVL+VGYGS+ +AP+
Sbjct: 259 SLDEDQIAANLVKNGPLAVAINAVFMQTYIGGVSCPYICSRRLDHGVLLVGYGSAAYAPV 318

Query: 320 RFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIHTTS 368
           R KEKPYWIIKNSWGE+WGENG+YKIC GRN+CGVDSMVS+VAA+ T S
Sbjct: 319 RMKEKPYWIIKNSWGESWGENGFYKICRGRNICGVDSMVSTVAAVQTNS 367


>gi|19851|emb|CAA78365.1| tobacco pre-pro-cysteine proteinase [Nicotiana tabacum]
          Length = 365

 Score =  570 bits (1469), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 272/368 (73%), Positives = 312/368 (84%), Gaps = 6/368 (1%)

Query: 1   MERLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKF 60
           M+RL L SL    L    +SA+A  D+D +IRQVV S+ E  + HLLNAEHHFSLFKSKF
Sbjct: 1   MDRLFLLSLPRFAL---FSSAIAFPDEDPLIRQVV-SETETDDSHLLNAEHHFSLFKSKF 56

Query: 61  SKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRL 120
            K YA++EEHD+RF+VFKANLRRA+  QLLDP+A HG+TKFSDLTPSEFRR +LGL++  
Sbjct: 57  GKIYASEEEHDHRFKVFKANLRRARLNQLLDPSAEHGITKFSDLTPSEFRRTYLGLHKP- 115

Query: 121 RLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGE 180
           +   +A+KAPILPT+DLP D+DWRDHGAVTGVK+QG+CGSCWSFS TGA+EGAHFL+TGE
Sbjct: 116 KPKVNAEKAPILPTSDLPADYDWRDHGAVTGVKNQGSCGSCWSFSTTGAVEGAHFLATGE 175

Query: 181 LVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGG 240
           LVSLSEQQLVDCDHECD E+  SCD+GC GGLM +AFEY LKAGG++ EKDYPYTG DG 
Sbjct: 176 LVSLSEQQLVDCDHECDSEQQDSCDAGCGGGLMTTAFEYTLKAGGLQLEKDYPYTGKDG- 234

Query: 241 SCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGK 300
            C FDKSKIAAAV+NFSVI  DEDQ+AANLVKHGPLAVGINA WMQTY+GGVSCP IC K
Sbjct: 235 KCHFDKSKIAAAVTNFSVIGLDEDQIAANLVKHGPLAVGINAAWMQTYVGGVSCPLICFK 294

Query: 301 YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSS 360
             DHGVL+VGYGS GFAPIR KEK YWIIKNSWGENWGE+GYYKIC G N+CGVD+MVS+
Sbjct: 295 RQDHGVLLVGYGSHGFAPIRLKEKAYWIIKNSWGENWGEHGYYKICRGHNICGVDAMVST 354

Query: 361 VAAIHTTS 368
           V A HTT+
Sbjct: 355 VTAAHTTN 362


>gi|19849|emb|CAA78361.1| tobacco pre-pro-cysteine proteinase [Nicotiana tabacum]
          Length = 363

 Score =  568 bits (1465), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 271/368 (73%), Positives = 311/368 (84%), Gaps = 8/368 (2%)

Query: 1   MERLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKF 60
           MERL L SLL  +L    +SA+A +D+D +IRQVV    E  + HLLNAEHHFSLFKSKF
Sbjct: 1   MERLFLLSLLAFVL---FSSAIAFSDEDPLIRQVV---SETDDSHLLNAEHHFSLFKSKF 54

Query: 61  SKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRL 120
            K YA++EEHD+RF+VFKANLRRA+  QLLDP+A HG+TKFSDLTPSEFRR +LGL++  
Sbjct: 55  GKIYASEEEHDHRFKVFKANLRRARLNQLLDPSAEHGITKFSDLTPSEFRRTYLGLHKP- 113

Query: 121 RLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGE 180
           +   +A+KAPILPT+DLP DFDWRDHGAVTGVK+QG+CGSCWSFS TGA+EGAHFL+TGE
Sbjct: 114 KPKLNAEKAPILPTSDLPADFDWRDHGAVTGVKNQGSCGSCWSFSTTGAVEGAHFLATGE 173

Query: 181 LVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGG 240
           LVSLSEQQLVDCDHECDPE+  +CD+GC GG   +AFEY LKAGG++ EKDYPYTG DG 
Sbjct: 174 LVSLSEQQLVDCDHECDPEQQDACDAGCGGGHYATAFEYTLKAGGLQLEKDYPYTGKDG- 232

Query: 241 SCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGK 300
            C FDKSKI AAV+NFSVI  DEDQ+AANLVKHGPLAVGINA WMQTY+GGVSCP IC K
Sbjct: 233 KCHFDKSKICAAVTNFSVIGLDEDQIAANLVKHGPLAVGINAAWMQTYVGGVSCPLICFK 292

Query: 301 YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSS 360
             DHGVL+VGYGS GFAPIR KEK YWIIKNSWGENWGE+GYYKIC G N+CGVD+MVS+
Sbjct: 293 RQDHGVLLVGYGSHGFAPIRLKEKAYWIIKNSWGENWGEHGYYKICRGHNICGVDAMVST 352

Query: 361 VAAIHTTS 368
           V A HTT+
Sbjct: 353 VTAAHTTN 360


>gi|223049408|gb|ACM80348.1| cysteine proteinase [Solanum lycopersicum]
          Length = 368

 Score =  568 bits (1464), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 268/367 (73%), Positives = 315/367 (85%), Gaps = 13/367 (3%)

Query: 10  LLLLLSSVLASA--VAVN------DDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFS 61
           L+ +LS +L ++  +AVN      DDD +IRQVV  +    + H+LNAEHHF+LFK +F 
Sbjct: 7   LVFVLSILLTTSFLLAVNGEIKGGDDDILIRQVVGDE----DHHMLNAEHHFTLFKKRFG 62

Query: 62  KTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLR 121
           KTYA+ EEH YRF VFKANLRRA R Q LDP+AVHGVT+FSD+TP EF ++FLG+NRRLR
Sbjct: 63  KTYASDEEHHYRFSVFKANLRRAMRHQKLDPSAVHGVTQFSDMTPDEFSQKFLGVNRRLR 122

Query: 122 LPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGEL 181
            P+DA KAPILPT DLP+DFDWR+HGAVT VK+QG+CGSCWSFS TGALEGA+FL+TG+L
Sbjct: 123 FPSDANKAPILPTEDLPSDFDWREHGAVTPVKNQGSCGSCWSFSTTGALEGANFLATGKL 182

Query: 182 VSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGS 241
           VSLSEQQLVDCDHECDPEE  SCDSGC+GGLMNSAFEY LKAGG+ RE+DYPYTGTD  +
Sbjct: 183 VSLSEQQLVDCDHECDPEEKDSCDSGCSGGLMNSAFEYTLKAGGLMREEDYPYTGTDKAT 242

Query: 242 CKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKY 301
           CKFD +K+AA V+NFSV+S DE+Q+AANLVK+GPLAV INAV+MQTY+GGVSCPYIC K 
Sbjct: 243 CKFDNTKVAAKVANFSVVSLDEEQIAANLVKNGPLAVAINAVFMQTYVGGVSCPYICSKQ 302

Query: 302 LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSV 361
           LDHGVL+VGYG +GF+PIR KEKPYWIIKNSWGE WGE+GYYKI  GRNVCGVDSMVS+V
Sbjct: 303 LDHGVLLVGYG-TGFSPIRMKEKPYWIIKNSWGEKWGESGYYKIRRGRNVCGVDSMVSTV 361

Query: 362 AAIHTTS 368
           AA+ T+S
Sbjct: 362 AAVSTSS 368


>gi|359492179|ref|XP_002280808.2| PREDICTED: cysteine proteinase RD19a-like [Vitis vinifera]
 gi|302142580|emb|CBI19783.3| unnamed protein product [Vitis vinifera]
          Length = 365

 Score =  567 bits (1461), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 265/350 (75%), Positives = 307/350 (87%), Gaps = 8/350 (2%)

Query: 20  SAVAVND-DDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFK 78
           S V+ N+ DD +IRQVV      + D LL+AEHHF+ FK++F KTYAT EEHDYRF +FK
Sbjct: 23  SDVSSNELDDLLIRQVV-----SNSDDLLSAEHHFAAFKARFRKTYATAEEHDYRFSIFK 77

Query: 79  ANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLP 138
           ANLRRAKR QLLDP+AVHGVT+FSDLTP+EFR+ +LGL + LR P D Q+APILPTNDLP
Sbjct: 78  ANLRRAKRNQLLDPSAVHGVTRFSDLTPAEFRQNYLGL-KPLRFPIDTQQAPILPTNDLP 136

Query: 139 TDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDP 198
           TDFDWRDHGAVT VKDQG CGSCWSFS TGALEGAHFL+TG LVSLSEQQLVDCDHECDP
Sbjct: 137 TDFDWRDHGAVTAVKDQGECGSCWSFSTTGALEGAHFLATGNLVSLSEQQLVDCDHECDP 196

Query: 199 EESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSV 258
           EE G+CD GCNGGLMN+AFEYILKAGGV R +DYPYTGTD G CKFDK+KIAA+VSNFS 
Sbjct: 197 EEYGACDRGCNGGLMNTAFEYILKAGGVVRGEDYPYTGTD-GHCKFDKTKIAASVSNFST 255

Query: 259 ISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAP 318
           +S DEDQ+AANLVK+GPLAVGINA++MQ+Y GGVSCP+IC   L+HGVL+VGYGS+G++P
Sbjct: 256 VSIDEDQIAANLVKNGPLAVGINAIFMQSYAGGVSCPFICSTSLNHGVLLVGYGSAGYSP 315

Query: 319 IRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIHTTS 368
           IRFKEKPYW++KNSWG+NWGE+GYYKIC G N+CGVDSMVS+VAAI + +
Sbjct: 316 IRFKEKPYWLLKNSWGQNWGEHGYYKICRGHNICGVDSMVSTVAAIQSAT 365


>gi|357473427|ref|XP_003606998.1| Cysteine proteinase [Medicago truncatula]
 gi|355508053|gb|AES89195.1| Cysteine proteinase [Medicago truncatula]
          Length = 362

 Score =  567 bits (1460), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 263/368 (71%), Positives = 312/368 (84%), Gaps = 6/368 (1%)

Query: 1   MERLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKF 60
           M+   L   ++L + SV A +     +D +IRQVV  +G +     L AEHHF+LFK KF
Sbjct: 1   MDHRTLLLFVVLFIFSVSAFSTPDEGEDPIIRQVVDEEGVR-----LGAEHHFNLFKHKF 55

Query: 61  SKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRL 120
            K Y++++EHDYRF++FK+NL RAKR QL+DP+AVHGVT+FSDLTP EFR+  LGL R +
Sbjct: 56  GKVYSSKDEHDYRFKIFKSNLNRAKRHQLMDPSAVHGVTRFSDLTPREFRKSVLGL-RGV 114

Query: 121 RLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGE 180
            LP DA  APILPT++LP DFDWR+ GAVT VK+QG+CGSCWSFS TGALEGAHFLSTG+
Sbjct: 115 GLPKDANAAPILPTDNLPKDFDWREKGAVTAVKNQGSCGSCWSFSTTGALEGAHFLSTGK 174

Query: 181 LVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGG 240
           LVSLSEQQLVDCDHECDPE+ GSCD+GCNGGLMNSAFEYILK+GGV RE+DYPY+GTD G
Sbjct: 175 LVSLSEQQLVDCDHECDPEQPGSCDAGCNGGLMNSAFEYILKSGGVMREEDYPYSGTDRG 234

Query: 241 SCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGK 300
           SCKFDK KIAA+V+NFSV+S DEDQ+AANLVK+GPLA+ +NAV+MQTY+GGVSCPYIC K
Sbjct: 235 SCKFDKKKIAASVANFSVVSLDEDQIAANLVKNGPLAIALNAVYMQTYVGGVSCPYICSK 294

Query: 301 YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSS 360
            LDHGVL+VGYGS  ++PIR KEKPYWIIKNSWGE WGENGYYKIC GRN+CGVDSMVS+
Sbjct: 295 RLDHGVLLVGYGSGAYSPIRLKEKPYWIIKNSWGETWGENGYYKICRGRNICGVDSMVST 354

Query: 361 VAAIHTTS 368
           VAA+HTT+
Sbjct: 355 VAAVHTTT 362


>gi|356545108|ref|XP_003540987.1| PREDICTED: cysteine proteinase RD19a-like [Glycine max]
          Length = 365

 Score =  565 bits (1457), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 267/363 (73%), Positives = 312/363 (85%), Gaps = 9/363 (2%)

Query: 9   LLLLLLSSVLASAVAVND---DDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYA 65
           LLL+  S V A+  A +D   ++ +I QVV  DG    D  L AEHHF  FK +F K Y 
Sbjct: 8   LLLVAFSLVFAAVSASSDGGNEEPLIMQVV--DGG---DVRLGAEHHFLEFKRRFGKAYD 62

Query: 66  TQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPAD 125
           +++EHDYR++VFKAN+RRA+R Q LDP+A HGVT+FSDLTPSEFR + LGL R +RLP D
Sbjct: 63  SEDEHDYRYKVFKANMRRARRHQSLDPSAAHGVTRFSDLTPSEFRNKVLGL-RGVRLPLD 121

Query: 126 AQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLS 185
           A KAPILPT++LP+DFDWRDHGAVT VK+QG+CGSCWSFS TGALEGAHFLSTGELVSLS
Sbjct: 122 ANKAPILPTDNLPSDFDWRDHGAVTPVKNQGSCGSCWSFSTTGALEGAHFLSTGELVSLS 181

Query: 186 EQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFD 245
           EQQLVDCDHECDPEE GSCDSGCNGGLMNSAFEYILK+GGV RE+DYPY+G D G+CKFD
Sbjct: 182 EQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYILKSGGVMREEDYPYSGADSGTCKFD 241

Query: 246 KSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHG 305
           K+KIAA+V+NFSV+S DEDQ+AANLVK+GPLAV INA +MQTYIGGVSCPY+C + L+HG
Sbjct: 242 KTKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAAYMQTYIGGVSCPYVCSRRLNHG 301

Query: 306 VLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIH 365
           VL+VGYGS  +APIR KEKP+WIIKNSWGENWGENGYYKIC GRN+CGVDSMVS+VA++H
Sbjct: 302 VLLVGYGSGAYAPIRMKEKPFWIIKNSWGENWGENGYYKICRGRNICGVDSMVSTVASVH 361

Query: 366 TTS 368
           TT+
Sbjct: 362 TTT 364


>gi|4757570|gb|AAD29084.1|AF082181_1 cysteine proteinase precursor [Solanum melongena]
          Length = 363

 Score =  565 bits (1456), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 264/347 (76%), Positives = 302/347 (87%), Gaps = 5/347 (1%)

Query: 22  VAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANL 81
           +A +DDD +IRQVV    E  ++H+LNAEHHFSLFKSK+ K YA+QEEHD+R +VFKANL
Sbjct: 19  IAFSDDDPLIRQVV---SETDDNHMLNAEHHFSLFKSKYGKIYASQEEHDHRLKVFKANL 75

Query: 82  RRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDF 141
           RRA+R QLLDPTA HG+T+FSDLTPSEFRR +LGL++  R   +AQKAPILPT+DLP DF
Sbjct: 76  RRARRHQLLDPTAEHGITQFSDLTPSEFRRTYLGLHKP-RPKLNAQKAPILPTSDLPEDF 134

Query: 142 DWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEES 201
           DWR+ GAVTGVK+QG+CGSCWSFS TGA+EGAHFL+TGELVSLSEQQLVDCDHECD EE 
Sbjct: 135 DWREKGAVTGVKNQGSCGSCWSFSTTGAVEGAHFLATGELVSLSEQQLVDCDHECDAEEK 194

Query: 202 GSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISS 261
             CD+GCNGGLM +AFEY LKAGG++REKDYPYTG DG  C FDKSKIAA+V+NFSVI  
Sbjct: 195 SECDAGCNGGLMTTAFEYTLKAGGLQREKDYPYTGRDG-KCHFDKSKIAASVANFSVIGL 253

Query: 262 DEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRF 321
           DEDQ+AANLVKHGPLAVGINA WMQTY+ GVSCP IC K  DHGVL+VGYGS+GFAPIR 
Sbjct: 254 DEDQIAANLVKHGPLAVGINAAWMQTYMRGVSCPLICFKRQDHGVLLVGYGSAGFAPIRL 313

Query: 322 KEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIHTTS 368
           KEKPYWIIKNSWGENWGE+GYYKIC G N+CGVD+MVS+V A HTT+
Sbjct: 314 KEKPYWIIKNSWGENWGEHGYYKICRGHNICGVDAMVSTVTATHTTN 360


>gi|218137972|gb|ACK57563.1| cysteine protease-like protein [Arachis hypogaea]
          Length = 364

 Score =  564 bits (1454), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 268/344 (77%), Positives = 303/344 (88%), Gaps = 5/344 (1%)

Query: 25  NDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRA 84
           +DD+ +IRQVV    E  ++HLLNAEHHFS FK+KFSKTYAT+EEHDYRF VFK+NL RA
Sbjct: 25  DDDNILIRQVV----EDGDEHLLNAEHHFSAFKTKFSKTYATKEEHDYRFGVFKSNLLRA 80

Query: 85  KRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWR 144
           K  Q LDP+A+HGVTKFSDLTPSEFR QFLGL + L LP+DA  APILPT++LP DFDWR
Sbjct: 81  KSHQELDPSAIHGVTKFSDLTPSEFRSQFLGL-KPLSLPSDAHNAPILPTDNLPKDFDWR 139

Query: 145 DHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSC 204
           DHGAVT VK+QG  GSCWSFS TGALEGAHFL+TGELVSLSEQQLVDCDHECDP+ + +C
Sbjct: 140 DHGAVTNVKNQGTGGSCWSFSTTGALEGAHFLATGELVSLSEQQLVDCDHECDPDLNDAC 199

Query: 205 DSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDED 264
           DSGCNGGLM +AF Y  KAGG+ RE+DY YTG D G CKFDKSKIAA+VSNFSV+S DED
Sbjct: 200 DSGCNGGLMTTAFGYTKKAGGLVREEDYLYTGRDRGPCKFDKSKIAASVSNFSVVSLDED 259

Query: 265 QMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEK 324
           Q+AANLVK+GPL+VGINAV+MQTYIGGVSCP+ICGK+LDHGVL+VGYG+ G+APIRFKEK
Sbjct: 260 QIAANLVKNGPLSVGINAVYMQTYIGGVSCPFICGKHLDHGVLLVGYGAGGYAPIRFKEK 319

Query: 325 PYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIHTTS 368
           PYWIIKNSWGENWGENGYYKIC G N+CGVDSMVS+V AIHT S
Sbjct: 320 PYWIIKNSWGENWGENGYYKICRGPNMCGVDSMVSTVIAIHTFS 363


>gi|1401242|gb|AAB67878.1| pre-pro-cysteine proteinase [Vicia faba]
          Length = 363

 Score =  564 bits (1453), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 265/369 (71%), Positives = 312/369 (84%), Gaps = 7/369 (1%)

Query: 1   MERLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKF 60
           M+R  + +++L   +   +S    N DD +IRQVV    +  EDHLLNAEHHF+ FKSKF
Sbjct: 1   MDRRFIFAIVLFA-AVATSSTDNTNTDDFIIRQVV----DNEEDHLLNAEHHFTSFKSKF 55

Query: 61  SKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRL 120
           SK+Y+T+EEHDYRF VFK+NL +AK  Q LDPTA HG+TKFSDLT SEFRRQFLGL +RL
Sbjct: 56  SKSYSTKEEHDYRFGVFKSNLIKAKLHQKLDPTAEHGITKFSDLTASEFRRQFLGLKKRL 115

Query: 121 RLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGE 180
           RLPA AQKAPILPT +LP DFDWR+ GAVT VKDQG+CGSCW+FS TGALEGAH+L+TG+
Sbjct: 116 RLPAHAQKAPILPTTNLPEDFDWREKGAVTPVKDQGSCGSCWAFSTTGALEGAHYLATGK 175

Query: 181 LVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGG 240
           LVSLSEQQLVDCDH CDPE++GSCDSGCNGGLMN+AFEY+L++GGV +EKDY YTG D G
Sbjct: 176 LVSLSEQQLVDCDHVCDPEQAGSCDSGCNGGLMNNAFEYLLQSGGVVQEKDYAYTGRD-G 234

Query: 241 SCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGK 300
           SCKFDKSK+ A+VSNFSV+S DE+Q+AANLVK+GPLAVGINA WMQTY+ GVSCPY+C K
Sbjct: 235 SCKFDKSKVVASVSNFSVVSLDEEQIAANLVKNGPLAVGINAAWMQTYMSGVSCPYVCAK 294

Query: 301 -YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVS 359
             LDHGVL+VG+G   +APIR KEKPYWI+KNSWG+NWGE GYYKIC GRNVCGVDSMVS
Sbjct: 295 SRLDHGVLLVGFGKGAYAPIRLKEKPYWIVKNSWGQNWGEQGYYKICRGRNVCGVDSMVS 354

Query: 360 SVAAIHTTS 368
           +VAA  + +
Sbjct: 355 TVAAAQSNN 363


>gi|15705865|gb|AAL05851.1|AF411121_1 cysteine proteinase precursor [Sandersonia aurantiaca]
          Length = 360

 Score =  563 bits (1452), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 262/341 (76%), Positives = 296/341 (86%), Gaps = 4/341 (1%)

Query: 27  DDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKR 86
           +D +IRQVV  D +Q    LL+AE HFS F S++ K+YA + EH YRF VFK+NLRRA+R
Sbjct: 23  EDPVIRQVVSDDQQQ----LLSAEAHFSSFLSRYGKSYADEAEHAYRFSVFKSNLRRARR 78

Query: 87  RQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDH 146
            Q LDPTAVHGVT+F+DLTPSEFRR +LGL RR R       APILPTN+LP DFDWRDH
Sbjct: 79  HQRLDPTAVHGVTRFADLTPSEFRRTYLGLRRRPRTAGSTHDAPILPTNELPADFDWRDH 138

Query: 147 GAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDS 206
           GAVT VK+QG+CGSCWSFSA GALEGA++LSTG LVSLSEQQLVDCDHECD  E  SCD 
Sbjct: 139 GAVTPVKNQGSCGSCWSFSAAGALEGANYLSTGNLVSLSEQQLVDCDHECDSSEPDSCDQ 198

Query: 207 GCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQM 266
           GCNGGLM +AFEYILK+GG+ERE DYPYTGTD G+CKF+K+KI+A  SNFSV+S DEDQ+
Sbjct: 199 GCNGGLMTTAFEYILKSGGLEREADYPYTGTDRGTCKFNKAKISAVASNFSVVSIDEDQI 258

Query: 267 AANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPY 326
           AANLVKHGPLAVGINAV+MQTY+GGVSCPYICGK+LDHGVL+VGYGS+GFAPIRFKEKPY
Sbjct: 259 AANLVKHGPLAVGINAVFMQTYVGGVSCPYICGKHLDHGVLLVGYGSAGFAPIRFKEKPY 318

Query: 327 WIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIHTT 367
           WIIKNSWGENWGENGYYKIC GRNVCGVDSMVSSV+A HT+
Sbjct: 319 WIIKNSWGENWGENGYYKICRGRNVCGVDSMVSSVSAFHTS 359


>gi|27413319|gb|AAO11786.1| pre-pro cysteine proteinase [Vicia faba]
          Length = 363

 Score =  563 bits (1452), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 265/369 (71%), Positives = 312/369 (84%), Gaps = 7/369 (1%)

Query: 1   MERLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKF 60
           M+R  + +++L   +   +S    N DD +IRQVV    +  EDHLLNAEHHF+ FKSKF
Sbjct: 1   MDRRFIFAIVLFA-AVATSSTDDTNTDDFIIRQVV----DNEEDHLLNAEHHFTSFKSKF 55

Query: 61  SKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRL 120
           SK+Y+T+EEHDYRF VFK+NL +AK  Q LDPTA HG+TKFSDLT SEFRRQFLGL +RL
Sbjct: 56  SKSYSTKEEHDYRFGVFKSNLIKAKLHQKLDPTAEHGITKFSDLTASEFRRQFLGLKKRL 115

Query: 121 RLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGE 180
           RLPA AQKAPILPT +LP DFDWR+ GAVT VKDQG+CGSCW+FS TGALEGAH+L+TG+
Sbjct: 116 RLPAHAQKAPILPTTNLPEDFDWREKGAVTPVKDQGSCGSCWAFSTTGALEGAHYLATGK 175

Query: 181 LVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGG 240
           LVSLSEQQLVDCDH CDPE++GSCDSGCNGGLMN+AFEY+L++GGV +EKDY YTG D G
Sbjct: 176 LVSLSEQQLVDCDHVCDPEQAGSCDSGCNGGLMNNAFEYLLQSGGVVQEKDYAYTGRD-G 234

Query: 241 SCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGK 300
           SCKFDKSK+ A+VSNFSV+S DE+Q+AANLVK+GPLAVGINA WMQTY+ GVSCPY+C K
Sbjct: 235 SCKFDKSKVVASVSNFSVVSLDEEQIAANLVKNGPLAVGINAAWMQTYMSGVSCPYVCAK 294

Query: 301 -YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVS 359
             LDHGVL+VG+G   +APIR KEKPYWI+KNSWG+NWGE GYYKIC GRNVCGVDSMVS
Sbjct: 295 SRLDHGVLLVGFGKGAYAPIRLKEKPYWIVKNSWGQNWGEQGYYKICRGRNVCGVDSMVS 354

Query: 360 SVAAIHTTS 368
           +VAA  + +
Sbjct: 355 TVAAAQSNN 363


>gi|359492709|ref|XP_002280798.2| PREDICTED: cysteine proteinase RD19a-like [Vitis vinifera]
 gi|147841854|emb|CAN73591.1| hypothetical protein VITISV_022889 [Vitis vinifera]
 gi|302142582|emb|CBI19785.3| unnamed protein product [Vitis vinifera]
          Length = 371

 Score =  562 bits (1449), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 266/342 (77%), Positives = 301/342 (88%), Gaps = 6/342 (1%)

Query: 27  DDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKR 86
           +D +I QVV SDG    D LLNAE+ F+ FK+KF KTYAT EEHD+RF VFKANLRRAKR
Sbjct: 35  EDLLIHQVV-SDG----DDLLNAEYQFAEFKTKFGKTYATAEEHDHRFNVFKANLRRAKR 89

Query: 87  RQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDH 146
            QLLDP+A HGVT+FSDLTP EFR+ +LGL +RL+LPADAQKAPILPT DLPTDFDWRDH
Sbjct: 90  HQLLDPSAEHGVTQFSDLTPREFRQNYLGL-KRLQLPADAQKAPILPTKDLPTDFDWRDH 148

Query: 147 GAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDS 206
           GAVT VKDQG CGSCWSFS  GALEGAHFL+TG LVSLS QQL+DCD ECDPEE  +CD 
Sbjct: 149 GAVTAVKDQGYCGSCWSFSTIGALEGAHFLATGNLVSLSTQQLLDCDTECDPEEYDACDD 208

Query: 207 GCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQM 266
           GCNGGLMN+AFEYILKAGGV +E+DYPYTGTD G C+F+K+KIAA+V+NFSV+S DEDQ+
Sbjct: 209 GCNGGLMNNAFEYILKAGGVAQEEDYPYTGTDRGLCRFNKTKIAASVANFSVVSLDEDQI 268

Query: 267 AANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPY 326
           AANLVK+GPLAVGINAV+MQTY  GVSCPYIC   LDHGVL+VGYGS+G++PIRFKEKPY
Sbjct: 269 AANLVKNGPLAVGINAVFMQTYKSGVSCPYICSSTLDHGVLLVGYGSAGYSPIRFKEKPY 328

Query: 327 WIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIHTTS 368
           WIIKNSWGE+WGE GYYKIC G N+CGVDSMVS+VAAIHTT+
Sbjct: 329 WIIKNSWGESWGEQGYYKICRGHNICGVDSMVSTVAAIHTTA 370


>gi|171854651|dbj|BAG16515.1| putative cysteine proteinase [Capsicum chinense]
          Length = 367

 Score =  562 bits (1449), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 266/369 (72%), Positives = 314/369 (85%), Gaps = 6/369 (1%)

Query: 1   MERLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKF 60
           M+RL L SLL+  + S  +SA A +D+D +IRQV  S+ + + +HLLNAEHHFSLFKSKF
Sbjct: 1   MDRLFLLSLLVFTIFS--SSAFAFSDEDPLIRQVT-SESDDNNNHLLNAEHHFSLFKSKF 57

Query: 61  SKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRL 120
            K YATQEEHD+R +VFKANLRRA+R QLLDPTA HG+TKFSDLTPSEFRR +LGL++  
Sbjct: 58  GKIYATQEEHDHRLKVFKANLRRARRHQLLDPTAEHGITKFSDLTPSEFRRTYLGLHKP- 116

Query: 121 RLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGE 180
           +      KAPILPT+DLP DFDWR+ GAVTGVK+QG+CGSCWSFS TGA+EGAHFL+TGE
Sbjct: 117 KPKLSTTKAPILPTSDLPEDFDWREKGAVTGVKNQGSCGSCWSFSTTGAVEGAHFLATGE 176

Query: 181 LVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGG 240
           LVSLSEQQLVDCDHECD E+   CD+GC GGLM +AFEY LKAGG++REKDYPYTG + G
Sbjct: 177 LVSLSEQQLVDCDHECDAEQKSECDAGCGGGLMTTAFEYTLKAGGLQREKDYPYTGRN-G 235

Query: 241 SCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGK 300
            C FDKSKIAA+V+N+SV+  DEDQ+AANLVKHGPLAVGIN+ WMQTYIGGVSCP +C K
Sbjct: 236 QCHFDKSKIAASVTNYSVVGLDEDQIAANLVKHGPLAVGINSAWMQTYIGGVSCPLVCFK 295

Query: 301 YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVS 359
           + DHGVL+VGYGS+GFAPIR K KPYWIIKNSWGE+WGE+GYYKIC G+ N+CGVD+MVS
Sbjct: 296 HQDHGVLLVGYGSAGFAPIRLKAKPYWIIKNSWGEHWGEHGYYKICRGQHNICGVDAMVS 355

Query: 360 SVAAIHTTS 368
           +V A HTT+
Sbjct: 356 TVTAAHTTN 364


>gi|357438145|ref|XP_003589348.1| Cysteine proteinase [Medicago truncatula]
 gi|355478396|gb|AES59599.1| Cysteine proteinase [Medicago truncatula]
          Length = 364

 Score =  562 bits (1448), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 264/344 (76%), Positives = 299/344 (86%), Gaps = 6/344 (1%)

Query: 24  VNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRR 83
            N DD +IRQVV    + +EDH+LNAEHHF+ FKSKFSK YAT+EEHDYRF VFK+NL +
Sbjct: 26  TNSDDLLIRQVV----DTAEDHILNAEHHFTSFKSKFSKNYATKEEHDYRFGVFKSNLIK 81

Query: 84  AKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDW 143
           AK  Q LDP+A HG+TKFSDLT SEFRRQFLGLN+RLRLPA AQKAPILPTN+LP DFDW
Sbjct: 82  AKLHQKLDPSAQHGITKFSDLTASEFRRQFLGLNKRLRLPAHAQKAPILPTNNLPEDFDW 141

Query: 144 RDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGS 203
           R+ GAVT VKDQG+CGSCW+FS TGALEGA++L+TG+L SLSEQQLVDCDH CDPEE GS
Sbjct: 142 REKGAVTPVKDQGSCGSCWAFSTTGALEGANYLATGKLTSLSEQQLVDCDHVCDPEERGS 201

Query: 204 CDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDE 263
           CDSGCNGGLMN+AFEYIL++GGV  EKDY YTG D GSCKFDKSK+ A+VSNFSV+S DE
Sbjct: 202 CDSGCNGGLMNNAFEYILQSGGVVSEKDYAYTGRD-GSCKFDKSKVVASVSNFSVVSLDE 260

Query: 264 DQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGK-YLDHGVLIVGYGSSGFAPIRFK 322
           DQ+AANLVK+GPLAV INA WMQTY+ GVSCPYIC K  LDHGVL++G+G  G+APIR K
Sbjct: 261 DQIAANLVKNGPLAVAINAAWMQTYMSGVSCPYICAKARLDHGVLLLGFGQGGYAPIRLK 320

Query: 323 EKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIHT 366
           EKPYWIIKNSWG+NWGE GYYKIC GRNVCGVDSMVS+VAA  +
Sbjct: 321 EKPYWIIKNSWGQNWGEEGYYKICRGRNVCGVDSMVSTVAAAQS 364


>gi|297804580|ref|XP_002870174.1| hypothetical protein ARALYDRAFT_915142 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297316010|gb|EFH46433.1| hypothetical protein ARALYDRAFT_915142 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 373

 Score =  561 bits (1446), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 273/366 (74%), Positives = 316/366 (86%), Gaps = 5/366 (1%)

Query: 4   LILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKT 63
           LI ++LL + L S + S          IRQVVP   E++++HLLNAEHHFSLFKSK+ KT
Sbjct: 9   LIAATLLAVSLGSAVISGEVNYGFVNPIRQVVP---EENDEHLLNAEHHFSLFKSKYEKT 65

Query: 64  YATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRR-LRL 122
           YATQEEHD+RFRVFKANLRRA+R QLLDP+AVHGVT+FSDLTP EFRR+FLGL RR  RL
Sbjct: 66  YATQEEHDHRFRVFKANLRRARRNQLLDPSAVHGVTQFSDLTPKEFRRKFLGLKRRGFRL 125

Query: 123 PADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELV 182
           P D Q APILPT+DLPT+FDWR+ GAVT VK+QG CGSCWSFSA GALEGAHFL+T ELV
Sbjct: 126 PTDTQTAPILPTSDLPTEFDWREQGAVTPVKNQGMCGSCWSFSAIGALEGAHFLATKELV 185

Query: 183 SLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSC 242
           SLSEQQLVDCDHECDP ++ SCDSGC+GGLMN+AFEY LKAGG+ +E+DYPYTG D  +C
Sbjct: 186 SLSEQQLVDCDHECDPAQANSCDSGCSGGLMNNAFEYALKAGGLMKEEDYPYTGRDNTAC 245

Query: 243 KFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYL 302
           KFDKSKIAA+VSNFSV+SSDEDQ+AANLVKHGPLA+ INA+WMQTYIGGVSCPY+C K  
Sbjct: 246 KFDKSKIAASVSNFSVVSSDEDQIAANLVKHGPLAIAINAMWMQTYIGGVSCPYVCSKSQ 305

Query: 303 DHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMG-RNVCGVDSMVSSV 361
           DHGVL+VG+GSSG+APIR KEKPYWIIKNSWG  WGE+GYYKIC G  N+CG+D+MVS+V
Sbjct: 306 DHGVLLVGFGSSGYAPIRLKEKPYWIIKNSWGAMWGEHGYYKICRGPHNMCGMDTMVSTV 365

Query: 362 AAIHTT 367
           AA+HT+
Sbjct: 366 AAVHTS 371


>gi|457756|emb|CAA82995.1| cysteine proteinase [Vicia sativa]
          Length = 358

 Score =  561 bits (1445), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 263/343 (76%), Positives = 299/343 (87%), Gaps = 6/343 (1%)

Query: 27  DDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKR 86
           DD +IRQVV    +  EDHLLNAEHHF+ FKSKFSK+YAT+EEHDYRF VFKANL +AK 
Sbjct: 21  DDFLIRQVV----DNEEDHLLNAEHHFTSFKSKFSKSYATKEEHDYRFGVFKANLIKAKL 76

Query: 87  RQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDH 146
            Q LDPTA HG+TKFSDLT SEFRRQFLGLN+RLRLPA AQKAPILPT +LP DFDWR+ 
Sbjct: 77  HQKLDPTAEHGITKFSDLTASEFRRQFLGLNKRLRLPAHAQKAPILPTTNLPEDFDWREK 136

Query: 147 GAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDS 206
           GAVT VKDQG+CGSCW+FS TGALEGAH+L+TG+LVSLSEQQLVDCDH CDPEE+GSCDS
Sbjct: 137 GAVTPVKDQGSCGSCWAFSTTGALEGAHYLATGKLVSLSEQQLVDCDHVCDPEEAGSCDS 196

Query: 207 GCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQM 266
           GCNGGLMN+AFEY+L++GGV +EKDY YTG D GSCKFDKSK+ A+VSNFSV+S DE+Q+
Sbjct: 197 GCNGGLMNNAFEYLLQSGGVVQEKDYAYTGRD-GSCKFDKSKVVASVSNFSVVSLDEEQI 255

Query: 267 AANLVKHGPLAVGINAVWMQTYIGGVSCPYICGK-YLDHGVLIVGYGSSGFAPIRFKEKP 325
           AANLVK+GPLAV INA WMQ Y+ GVSCPY+C K  LDHGVL+VG+G   +APIR KEKP
Sbjct: 256 AANLVKNGPLAVAINAAWMQAYMSGVSCPYVCAKARLDHGVLLVGFGKGAYAPIRLKEKP 315

Query: 326 YWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIHTTS 368
           YWIIKNSWG+NWGE GYYKIC GRNVCGVDSMVS+VAA  + +
Sbjct: 316 YWIIKNSWGQNWGEQGYYKICRGRNVCGVDSMVSTVAAAQSNN 358


>gi|71482944|gb|AAZ32411.1| cysteine proteinase glycinain type [Nicotiana benthamiana]
          Length = 355

 Score =  561 bits (1445), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 262/340 (77%), Positives = 300/340 (88%), Gaps = 3/340 (0%)

Query: 22  VAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANL 81
           VA +D+D +IRQVV S+ E  + HLLNAEHHFSLFKSKF K YA++EEHD+RF+VFKANL
Sbjct: 19  VAFSDEDPLIRQVV-SETETDDSHLLNAEHHFSLFKSKFGKIYASEEEHDHRFKVFKANL 77

Query: 82  RRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDF 141
           RRA+R QLLDP+A HG+TKFSDLTPSEFRR +LGL++  +   +A+KAPILPT+DLP D+
Sbjct: 78  RRARRHQLLDPSAEHGITKFSDLTPSEFRRTYLGLHKP-KPKLNAEKAPILPTSDLPADY 136

Query: 142 DWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEES 201
           DWRDHGAVTGVK+QG+CGSCWSFS TGA+EGAHFL+TGELVSLSEQQLVDCDHECDPE+ 
Sbjct: 137 DWRDHGAVTGVKNQGSCGSCWSFSTTGAVEGAHFLATGELVSLSEQQLVDCDHECDPEQQ 196

Query: 202 GSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISS 261
            SCD+GC+GGLM +AFEY LKAGG++REKDYPYTG  G  C FDKSKIAAAV+NFSVI  
Sbjct: 197 DSCDAGCSGGLMTTAFEYTLKAGGLQREKDYPYTGKXG-KCHFDKSKIAAAVTNFSVIGL 255

Query: 262 DEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRF 321
           DEDQ+AANLVKHGPLAVGINA WMQTY+GGVSCP IC K  DHGVL+VGYGS GFAPIR 
Sbjct: 256 DEDQIAANLVKHGPLAVGINAAWMQTYVGGVSCPLICFKRQDHGVLLVGYGSHGFAPIRL 315

Query: 322 KEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSV 361
           KEK YWIIKNSWGENWGE+GYYKIC G N+CGVD+MVS+V
Sbjct: 316 KEKAYWIIKNSWGENWGEHGYYKICRGHNICGVDAMVSTV 355


>gi|42407296|dbj|BAD10859.1| cysteine protease [Aster tripolium]
          Length = 363

 Score =  561 bits (1445), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 258/348 (74%), Positives = 304/348 (87%), Gaps = 3/348 (0%)

Query: 21  AVAVNDDDAMIRQVVPSDGEQSE-DHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKA 79
           AV  +  D +IRQVV +D  + E D LL+ EHHF LFK+KF +TY T+EEH+YR  VFK+
Sbjct: 17  AVTADSSDPLIRQVVQNDETEIESDPLLDPEHHFKLFKNKFGRTYDTEEEHEYRLTVFKS 76

Query: 80  NLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPT 139
           NLRRAKR Q+LDPTA HGVTKFSDLTPSEFR+++LGL  +L+LPADA KAPILPT++LP 
Sbjct: 77  NLRRAKRHQVLDPTAKHGVTKFSDLTPSEFRKKYLGLKSKLKLPADANKAPILPTSNLPQ 136

Query: 140 DFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPE 199
           DFDWRD GAVT VK+QG+CGSCWSFS TGALEG+HFL TGELVSLSEQQLVDCDHECDP 
Sbjct: 137 DFDWRDKGAVTPVKNQGSCGSCWSFSTTGALEGSHFLQTGELVSLSEQQLVDCDHECDPA 196

Query: 200 ESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVI 259
           E  SCDSGCNGGLMN+AFEYILKAGG+++E DYPYTG D G+CKFDKSKIAA+V+NFSV+
Sbjct: 197 EYNSCDSGCNGGLMNNAFEYILKAGGLQKEADYPYTGRD-GTCKFDKSKIAASVANFSVV 255

Query: 260 SSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKY-LDHGVLIVGYGSSGFAP 318
           S+DEDQ+AANLV +GPLA+GINA WMQTYIG VSCPYIC K  +DHGVL+VGYGS+G+AP
Sbjct: 256 STDEDQIAANLVTNGPLAIGINAAWMQTYIGQVSCPYICSKTKMDHGVLLVGYGSAGYAP 315

Query: 319 IRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIHT 366
           +RFKEKPYWIIKNSWGE+WGE+GYYK+C G N CG+D+MVS+V + +T
Sbjct: 316 LRFKEKPYWIIKNSWGEDWGEDGYYKLCSGYNACGMDTMVSAVVSTNT 363


>gi|205364757|gb|ACI04578.1| cysteine protease-like protein [Robinia pseudoacacia]
          Length = 335

 Score =  560 bits (1443), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 266/340 (78%), Positives = 305/340 (89%), Gaps = 7/340 (2%)

Query: 28  DAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRR 87
           D +IRQVV    + +EDH+LNAEHHFS FKSKFSKTYAT+EEHDYRF VFK+N+RRAK  
Sbjct: 1   DLLIRQVV----DDNEDHVLNAEHHFSTFKSKFSKTYATKEEHDYRFGVFKSNVRRAKLH 56

Query: 88  QLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHG 147
             LDP+AVHGVTKFSDLTPSEFRRQFLGL + LRLP  AQKAPILPT+DLP DFDWRD G
Sbjct: 57  AKLDPSAVHGVTKFSDLTPSEFRRQFLGL-KPLRLPEHAQKAPILPTHDLPEDFDWRDKG 115

Query: 148 AVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSG 207
           AVT VK+QG+CGSCW+FS TGALEG+HFL+TGELVSLS+QQLVDCDH CDPE+ G+CDSG
Sbjct: 116 AVTHVKNQGSCGSCWAFSTTGALEGSHFLATGELVSLSDQQLVDCDHVCDPEQYGACDSG 175

Query: 208 CNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMA 267
           CNGGLMN+AFEYIL++GGV+RE+DYPYTG D G    D++  AA+VSNFSV+S DEDQ++
Sbjct: 176 CNGGLMNNAFEYILESGGVQREEDYPYTGRDRGPA-IDEAN-AASVSNFSVVSLDEDQIS 233

Query: 268 ANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYW 327
           ANLVK+GPLA+GINAV+MQTYIGGVSCPYICGK LDHGVL+VGYG +G+APIR KEKPYW
Sbjct: 234 ANLVKNGPLAIGINAVFMQTYIGGVSCPYICGKNLDHGVLLVGYGKAGYAPIRLKEKPYW 293

Query: 328 IIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIHTT 367
           IIKNSWGE+WGENGYYKIC GRNVCGVDSMVS+VAA+HT+
Sbjct: 294 IIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAAVHTS 333


>gi|118150|sp|P25804.1|CYSP_PEA RecName: Full=Cysteine proteinase 15A; AltName:
           Full=Turgor-responsive protein 15A; Flags: Precursor
 gi|20679|emb|CAA38242.1| unnamed protein product [Pisum sativum]
          Length = 363

 Score =  559 bits (1441), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 264/353 (74%), Positives = 304/353 (86%), Gaps = 8/353 (2%)

Query: 18  LASAVA--VNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFR 75
           +A+AV    N+DD +IRQVV    +  EDHLLNAEHHF+ FKSKFSK+YAT+EEHDYRF 
Sbjct: 15  VATAVTDDTNNDDFIIRQVV----DNEEDHLLNAEHHFTSFKSKFSKSYATKEEHDYRFG 70

Query: 76  VFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTN 135
           VFK+NL +AK  Q  DPTA HG+TKFSDLT SEFRRQFLGL +RLRLPA AQKAPILPT 
Sbjct: 71  VFKSNLIKAKLHQNRDPTAEHGITKFSDLTASEFRRQFLGLKKRLRLPAHAQKAPILPTT 130

Query: 136 DLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHE 195
           +LP DFDWR+ GAVT VKDQG+CGSCW+FS TGALEGAH+L+TG+LVSLSEQQLVDCDH 
Sbjct: 131 NLPEDFDWREKGAVTPVKDQGSCGSCWAFSTTGALEGAHYLATGKLVSLSEQQLVDCDHV 190

Query: 196 CDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSN 255
           CDPE++GSCDSGCNGGLMN+AFEY+L++GGV +EKDY YTG D GSCKFDKSK+ A+VSN
Sbjct: 191 CDPEQAGSCDSGCNGGLMNNAFEYLLESGGVVQEKDYAYTGRD-GSCKFDKSKVVASVSN 249

Query: 256 FSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGK-YLDHGVLIVGYGSS 314
           FSV++ DEDQ+AANLVK+GPLAV INA WMQTY+ GVSCPY+C K  LDHGVL+VG+G  
Sbjct: 250 FSVVTLDEDQIAANLVKNGPLAVAINAAWMQTYMSGVSCPYVCAKSRLDHGVLLVGFGKG 309

Query: 315 GFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIHTT 367
            +APIR KEKPYWIIKNSWG+NWGE GYYKIC GRNVCGVDSMVS+VAA  + 
Sbjct: 310 AYAPIRLKEKPYWIIKNSWGQNWGEQGYYKICRGRNVCGVDSMVSTVAAAQSN 362


>gi|57282617|emb|CAE54306.1| putative papain-like cysteine proteinase [Gossypium hirsutum]
          Length = 373

 Score =  559 bits (1441), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 257/342 (75%), Positives = 303/342 (88%), Gaps = 4/342 (1%)

Query: 28  DAMIRQVVPSDG-EQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKR 86
           D +I QV  +DG E +E  LL AEHH+SLFK +F K+Y +Q+EHDYRF++F+ NLRRA R
Sbjct: 34  DPLIEQV--TDGHEGAEPQLLTAEHHYSLFKKRFKKSYGSQKEHDYRFKIFQVNLRRAAR 91

Query: 87  RQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDH 146
            Q LDP+A HGVT+FSDLTP EFR+ +LGL RRLRLP DA +APILPT++LP DFDWR+ 
Sbjct: 92  HQNLDPSATHGVTQFSDLTPGEFRKAYLGL-RRLRLPKDATEAPILPTDNLPQDFDWREK 150

Query: 147 GAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDS 206
           GAVT VK+QG+CGSCWSFS TGALEGA+FL+TG+LVSLSEQQLVDCDHECDPEE+GSCDS
Sbjct: 151 GAVTPVKNQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEAGSCDS 210

Query: 207 GCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQM 266
           GCNGGLMNSAFEY LKAGG+ RE+DYPYTGTD G+CKFD +K+AA V+NFSV+S DEDQ+
Sbjct: 211 GCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGTCKFDNTKVAAKVANFSVVSLDEDQI 270

Query: 267 AANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPY 326
           AANL K+GPLAV INAV+MQTYIGGVSCPYIC K LDHGVL+VGYGS+G+AP+R K+KPY
Sbjct: 271 AANLFKNGPLAVAINAVFMQTYIGGVSCPYICSKRLDHGVLLVGYGSAGYAPVRMKDKPY 330

Query: 327 WIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIHTTS 368
           WIIKNSWGENWGENG+Y+IC GRN+CGVDSMVS+VAA++T S
Sbjct: 331 WIIKNSWGENWGENGFYRICRGRNICGVDSMVSTVAAVNTNS 372


>gi|34761156|gb|AAQ81938.1| cysteine proteinase precursor [Ipomoea batatas]
          Length = 371

 Score =  558 bits (1438), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 268/375 (71%), Positives = 317/375 (84%), Gaps = 16/375 (4%)

Query: 1   MERLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKF 60
           M+R  L SLL+  L+   A+ V   D+D +IRQVV SDGE  +D LLNA+HHF+LFKSK+
Sbjct: 1   MDRFSLPSLLIHALT---AACVVRADEDPLIRQVV-SDGE--DDALLNADHHFTLFKSKY 54

Query: 61  SKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRL 120
            K+YATQEEHDYR  VFKANLRRAKR Q+LDP+AVHGVTKFSDLTP EFRR +LG+ +  
Sbjct: 55  GKSYATQEEHDYRLSVFKANLRRAKRHQMLDPSAVHGVTKFSDLTPKEFRRTYLGIRKSS 114

Query: 121 RL--------PADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEG 172
                     PADA  A ILPT+DLP DF+WRD+GAVTGVKDQG CGSCWSFS TG LEG
Sbjct: 115 SSKQKLKLKLPADAHAAEILPTSDLPFDFEWRDYGAVTGVKDQGLCGSCWSFSTTGTLEG 174

Query: 173 AHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDY 232
            +FL+TGEL+SL+EQ+LVDCDH CDP+++G+CD+GCNGGLM +A+EY+L++GG+E+EKDY
Sbjct: 175 TNFLATGELLSLNEQELVDCDHLCDPKKAGACDAGCNGGLMTTAYEYVLQSGGLEKEKDY 234

Query: 233 PYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGV 292
           PYTG D G+CKFDKSKIAAAV+NFSV+S DEDQ+AANLVKHGPL+VGIN+++MQTYIGGV
Sbjct: 235 PYTGRD-GTCKFDKSKIAAAVANFSVVSLDEDQIAANLVKHGPLSVGINSIFMQTYIGGV 293

Query: 293 SCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNV 351
           SCPYIC K  LDHGVLIVGYG++G+APIRFK+KPYWIIKNSWGENWGE GYYKIC G N+
Sbjct: 294 SCPYICSKKNLDHGVLIVGYGAAGYAPIRFKDKPYWIIKNSWGENWGEEGYYKICRGNNI 353

Query: 352 CGVDSMVSSVAAIHT 366
           CGVDSMVSSV A  T
Sbjct: 354 CGVDSMVSSVTAAST 368


>gi|164605518|dbj|BAF98584.1| CM0216.500.nc [Lotus japonicus]
          Length = 360

 Score =  558 bits (1437), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 260/342 (76%), Positives = 298/342 (87%), Gaps = 8/342 (2%)

Query: 28  DAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRR 87
           D MI QVV  +G       L AEHHF  FK +F K YAT+EEH YRF VFK+N+ RA+R 
Sbjct: 27  DPMICQVVDDEG-------LGAEHHFLEFKRRFGKVYATEEEHGYRFNVFKSNMHRARRH 79

Query: 88  QLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHG 147
           QLLDP+AVHGVT+FSDLTP EFR   LGL R + LP+DA  APILPT++LP DFDWR+HG
Sbjct: 80  QLLDPSAVHGVTRFSDLTPMEFRHSVLGL-RGVGLPSDADSAPILPTDNLPKDFDWREHG 138

Query: 148 AVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSG 207
           AVT VK+QG+CGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDH+CDPEE+GSCDSG
Sbjct: 139 AVTPVKNQGSCGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHQCDPEEAGSCDSG 198

Query: 208 CNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMA 267
           CNGGLMNSAFEYIL  GGV RE+DYPY+GT+GG+CKFDK+KIAA+V+NFSV+S DEDQ+A
Sbjct: 199 CNGGLMNSAFEYILNNGGVMREEDYPYSGTNGGTCKFDKAKIAASVANFSVVSRDEDQIA 258

Query: 268 ANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYW 327
           ANLVK+GPLAV INAV+MQTY+GGVSCPY+C K L+HGVL+VGYGS  +APIR K+KPYW
Sbjct: 259 ANLVKNGPLAVAINAVYMQTYVGGVSCPYVCSKKLNHGVLLVGYGSESYAPIRMKQKPYW 318

Query: 328 IIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIHTTSS 369
           IIKNSWGENWGENGYYKIC GRN+CGVDSMVS+VAA+HTT +
Sbjct: 319 IIKNSWGENWGENGYYKICRGRNICGVDSMVSTVAALHTTGN 360


>gi|312985015|gb|ACX54787.2| cysteine protease [Arachis diogoi]
          Length = 360

 Score =  557 bits (1435), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 262/342 (76%), Positives = 304/342 (88%), Gaps = 7/342 (2%)

Query: 28  DAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRR 87
           D +IRQV  +DG+    H+LNAEHHF+ FK+KF K+YATQEEHDYRF VF+ANLRRAK  
Sbjct: 24  DPLIRQV--TDGDH---HMLNAEHHFTTFKTKFGKSYATQEEHDYRFGVFRANLRRAKLH 78

Query: 88  QLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHG 147
             LDP+A HGVTKFSDLTP EF+RQ+LGL + LRLP+ A KAPILPT+DLP +FDWRD G
Sbjct: 79  AKLDPSAEHGVTKFSDLTPEEFKRQYLGL-KPLRLPSTANKAPILPTSDLPENFDWRDKG 137

Query: 148 AVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSG 207
           AVT VK+QG+CGSCW+FS TGALEGAH+LSTGELVSLSEQQLVDCDH CDPEE G+CD+G
Sbjct: 138 AVTPVKNQGSCGSCWAFSTTGALEGAHYLSTGELVSLSEQQLVDCDHVCDPEEYGACDAG 197

Query: 208 CNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMA 267
           CNGGLMN+AF+YIL+AGGV+ EKDYPY+G D  +CKFDKSK+AA V+NFSV+S DEDQ+A
Sbjct: 198 CNGGLMNNAFDYILQAGGVQTEKDYPYSGRDE-TCKFDKSKVAATVANFSVVSLDEDQIA 256

Query: 268 ANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYW 327
           ANLVKHGPLAVGINA++MQTYIGGVSCPYICGK LDHGVL+VGYG++G+APIRFK+KP+W
Sbjct: 257 ANLVKHGPLAVGINAIFMQTYIGGVSCPYICGKNLDHGVLLVGYGAAGYAPIRFKDKPFW 316

Query: 328 IIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIHTTSS 369
           IIKNSWGE+WGE+GYYKIC G+NVCGVDSMVSSV A   TSS
Sbjct: 317 IIKNSWGESWGEDGYYKICRGKNVCGVDSMVSSVVATTFTSS 358


>gi|297801998|ref|XP_002868883.1| hypothetical protein ARALYDRAFT_490677 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297314719|gb|EFH45142.1| hypothetical protein ARALYDRAFT_490677 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 368

 Score =  555 bits (1431), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 268/371 (72%), Positives = 311/371 (83%), Gaps = 7/371 (1%)

Query: 1   MERLILS-SLLLLLLSSVLASAVAVND-DDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKS 58
           M+RL L  S+ +L    V  S+  VND DD +IRQVV      +E  +L +E HFSLFKS
Sbjct: 1   MDRLKLCFSVFVLFFLIVSVSSSDVNDGDDLVIRQVVGG----AEPQVLTSEDHFSLFKS 56

Query: 59  KFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNR 118
           KF K YA+ EEHDYRF VFKANLRRA+R Q LDP+A HGVT+FSDLT SEFR++ LG+  
Sbjct: 57  KFGKVYASNEEHDYRFSVFKANLRRARRHQKLDPSARHGVTQFSDLTRSEFRKKHLGVRA 116

Query: 119 RLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLST 178
             +LP DA KAPILPT +LP DFDWRD GAVT VK+QG+CGSCWSFSATGALEGA+FL+T
Sbjct: 117 GFKLPKDANKAPILPTENLPEDFDWRDRGAVTPVKNQGSCGSCWSFSATGALEGANFLAT 176

Query: 179 GELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTD 238
           G+LVSLSEQQLVDCDHECDPEE+GSCDSGCNGGLMNSAFEY LK GG+ +E+DYPYTG D
Sbjct: 177 GKLVSLSEQQLVDCDHECDPEEAGSCDSGCNGGLMNSAFEYTLKTGGLMKEEDYPYTGKD 236

Query: 239 GGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYIC 298
           G +CK DKSKI A+VSNFSVIS DE+Q+AANLVK+GPLAV INA +MQTYIGGVSCPYIC
Sbjct: 237 GKTCKLDKSKIVASVSNFSVISIDEEQIAANLVKNGPLAVAINAGYMQTYIGGVSCPYIC 296

Query: 299 GKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMV 358
            + L+HGVL+VGYGS+G+AP RFKEKPYWIIKNSWGE WGENG+YKIC GRN+CGVDS+V
Sbjct: 297 TRRLNHGVLLVGYGSAGYAPARFKEKPYWIIKNSWGETWGENGFYKICKGRNICGVDSLV 356

Query: 359 SSV-AAIHTTS 368
           S+V AA+ TT+
Sbjct: 357 STVTAAVSTTA 367


>gi|449469923|ref|XP_004152668.1| PREDICTED: cysteine proteinase RD19a-like [Cucumis sativus]
 gi|449520697|ref|XP_004167370.1| PREDICTED: cysteine proteinase RD19a-like [Cucumis sativus]
          Length = 371

 Score =  555 bits (1430), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 271/374 (72%), Positives = 311/374 (83%), Gaps = 15/374 (4%)

Query: 1   MERLILSSLLL-LLLSSVLASAV-------AVNDD-DAMIRQVVPSDGEQSEDHLLNAEH 51
           MER     L   +LLS+ +A  V       AV+D+ D +IRQVV      ++D  L AE 
Sbjct: 1   MERFNAIPLFFAILLSATVAYGVSSDQINSAVSDEEDILIRQVVSG----ADDRPLTAEQ 56

Query: 52  HFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRR 111
           HF  FK KF KTY T EEHDYRFRVFKANLR+AKR Q LDP AVHGVT+FSDLT SEFR 
Sbjct: 57  HFQDFKLKFGKTYTTDEEHDYRFRVFKANLRKAKRHQKLDPDAVHGVTRFSDLTESEFRE 116

Query: 112 QFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALE 171
            F+GLNR LRLPADA +APILPT++L +DFDWRD GAVT VKDQG+CGSCWSFSA GALE
Sbjct: 117 NFVGLNR-LRLPADAHQAPILPTDNLASDFDWRDQGAVTPVKDQGSCGSCWSFSAVGALE 175

Query: 172 GAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKD 231
           GA+FLSTG+L+SLSEQQLVDCDHECDPEE+G+CD+GCNGGLM SAFEYI+KAGG+ERE+D
Sbjct: 176 GANFLSTGKLISLSEQQLVDCDHECDPEEAGACDAGCNGGLMTSAFEYIVKAGGLEREED 235

Query: 232 YPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGG 291
           YPYTGTD GSCKF   KIAA+ +NFSVIS+D DQ+AANLVK+GPLA+GINAV+MQTY+ G
Sbjct: 236 YPYTGTDRGSCKFQNGKIAASAANFSVISNDADQIAANLVKNGPLAIGINAVFMQTYMKG 295

Query: 292 VSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRN 350
           +SCPYIC K  LDHGVL+VGYG++GFAPIR KEKPYWIIKNSWGENWGENGYY IC G+N
Sbjct: 296 ISCPYICSKRNLDHGVLLVGYGAAGFAPIRLKEKPYWIIKNSWGENWGENGYYFICKGKN 355

Query: 351 VCGVDSMVSSVAAI 364
           +CG +SMVSSVAAI
Sbjct: 356 ICGSESMVSSVAAI 369


>gi|312281839|dbj|BAJ33785.1| unnamed protein product [Thellungiella halophila]
          Length = 373

 Score =  555 bits (1430), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 264/372 (70%), Positives = 312/372 (83%), Gaps = 9/372 (2%)

Query: 3   RLILSSLLLLLL-----SSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFK 57
           +L  S  +LL+L     S ++A   + + DD +IRQVV  DG  +E  +L++E HFSLFK
Sbjct: 5   KLSFSVFVLLILFVSVSSGIVAETSSSDGDDLVIRQVV--DG--AEPKVLSSEDHFSLFK 60

Query: 58  SKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLN 117
            KF K YA+ EEHDYR  VFKANLRRA+R Q LDP+A HGVT+FSDLT SEFR++ LG+ 
Sbjct: 61  RKFGKVYASSEEHDYRLSVFKANLRRARRHQKLDPSARHGVTQFSDLTRSEFRKKHLGVR 120

Query: 118 RRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLS 177
              +LP DA KAPILPT +LP DFDWRD GAVT VK+QG+CGSCWSFSATGALEGA+FL+
Sbjct: 121 GGFKLPKDANKAPILPTENLPEDFDWRDRGAVTPVKNQGSCGSCWSFSATGALEGANFLA 180

Query: 178 TGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGT 237
           TG+LVSLSEQQLVDCDHECDPEE+GSCDSGCNGGLMNSAFEY LK GG+ RE+DYPYTG 
Sbjct: 181 TGKLVSLSEQQLVDCDHECDPEEAGSCDSGCNGGLMNSAFEYTLKTGGLMREEDYPYTGK 240

Query: 238 DGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYI 297
           DG +CK DKSKI A+VSNFSVIS DEDQ+AANLVK+GPLAV INA +MQTYIGGVSCPYI
Sbjct: 241 DGPTCKLDKSKIVASVSNFSVISIDEDQIAANLVKNGPLAVAINAAYMQTYIGGVSCPYI 300

Query: 298 CGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSM 357
           C + L+HGVL+VGYGS+G+AP RFKEKPYWIIKNSWGE+WGENG+YKIC GRN+CGVDS+
Sbjct: 301 CARRLNHGVLLVGYGSAGYAPARFKEKPYWIIKNSWGESWGENGFYKICKGRNICGVDSL 360

Query: 358 VSSVAAIHTTSS 369
           VS+V+A  +T++
Sbjct: 361 VSTVSATVSTTA 372


>gi|18420375|ref|NP_568052.1| cysteine proteinase RD19a [Arabidopsis thaliana]
 gi|1172872|sp|P43296.1|RD19A_ARATH RecName: Full=Cysteine proteinase RD19a; Short=RD19; Flags:
           Precursor
 gi|435618|dbj|BAA02373.1| thiol protease [Arabidopsis thaliana]
 gi|4539328|emb|CAB38829.1| drought-inducible cysteine proteinase RD19A precursor [Arabidopsis
           thaliana]
 gi|7270892|emb|CAB80572.1| drought-inducible cysteine proteinase RD19A precursor [Arabidopsis
           thaliana]
 gi|19310552|gb|AAL85009.1| putative cysteine proteinase RD19A [Arabidopsis thaliana]
 gi|22136868|gb|AAM91778.1| putative cysteine proteinase RD19A [Arabidopsis thaliana]
 gi|110740898|dbj|BAE98545.1| drought-inducible cysteine proteinase RD19A precursor [Arabidopsis
           thaliana]
 gi|332661616|gb|AEE87016.1| cysteine proteinase RD19a [Arabidopsis thaliana]
          Length = 368

 Score =  553 bits (1424), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 266/371 (71%), Positives = 310/371 (83%), Gaps = 6/371 (1%)

Query: 1   MERLILS-SLLLLLLSSVLASAVAVND-DDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKS 58
           M+RL L  S+ +L    V  S+  VND DD +IRQVV      +E  +L +E HFSLFK 
Sbjct: 1   MDRLKLYFSVFVLSFFIVSVSSSDVNDGDDLVIRQVVGG----AEPQVLTSEDHFSLFKR 56

Query: 59  KFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNR 118
           KF K YA+ EEHDYRF VFKANLRRA+R Q LDP+A HGVT+FSDLT SEFR++ LG+  
Sbjct: 57  KFGKVYASNEEHDYRFSVFKANLRRARRHQKLDPSATHGVTQFSDLTRSEFRKKHLGVRS 116

Query: 119 RLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLST 178
             +LP DA KAPILPT +LP DFDWRDHGAVT VK+QG+CGSCWSFSATGALEGA+FL+T
Sbjct: 117 GFKLPKDANKAPILPTENLPEDFDWRDHGAVTPVKNQGSCGSCWSFSATGALEGANFLAT 176

Query: 179 GELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTD 238
           G+LVSLSEQQLVDCDHECDPEE+ SCDSGCNGGLMNSAFEY LK GG+ +E+DYPYTG D
Sbjct: 177 GKLVSLSEQQLVDCDHECDPEEADSCDSGCNGGLMNSAFEYTLKTGGLMKEEDYPYTGKD 236

Query: 239 GGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYIC 298
           G +CK DKSKI A+VSNFSVIS DE+Q+AANLVK+GPLAV INA +MQTYIGGVSCPYIC
Sbjct: 237 GKTCKLDKSKIVASVSNFSVISIDEEQIAANLVKNGPLAVAINAGYMQTYIGGVSCPYIC 296

Query: 299 GKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMV 358
            + L+HGVL+VGYG++G+AP RFKEKPYWIIKNSWGE WGENG+YKIC GRN+CGVDSMV
Sbjct: 297 TRRLNHGVLLVGYGAAGYAPARFKEKPYWIIKNSWGETWGENGFYKICKGRNICGVDSMV 356

Query: 359 SSVAAIHTTSS 369
           S+VAA  +T++
Sbjct: 357 STVAATVSTTA 367


>gi|19195|emb|CAA78403.1| pre-pro-cysteine proteinase [Solanum lycopersicum]
          Length = 361

 Score =  552 bits (1423), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 261/366 (71%), Positives = 305/366 (83%), Gaps = 8/366 (2%)

Query: 3   RLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSK 62
           RL L S L   L    +SA+A +DDD +IRQVV  +    ++H+LNAEHHFSLFK+KF K
Sbjct: 1   RLFLLSFLAFAL---FSSAIAFSDDDPLIRQVVSGN---DDNHMLNAEHHFSLFKAKFGK 54

Query: 63  TYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRL 122
            YA+QEEHD+R +VFKANL RAKR QLLDP+A HG+T+FSDLTPSEFRR +LGLN+  R 
Sbjct: 55  IYASQEEHDHRLKVFKANLHRAKRHQLLDPSAEHGITQFSDLTPSEFRRTYLGLNKP-RP 113

Query: 123 PADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELV 182
             +A+KAPILPT DLP+DFDWR+ GAVT VK+QG+CGSCWSFS TGA+EGAHFL+TGELV
Sbjct: 114 NLNAEKAPILPTKDLPSDFDWREKGAVTDVKNQGSCGSCWSFSTTGAVEGAHFLATGELV 173

Query: 183 SLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSC 242
           SLSEQQLVDCDHECDP E   CD+GCNGGLM +AFEY LKAGG++ EKDYPYTG +G  C
Sbjct: 174 SLSEQQLVDCDHECDPVEKNDCDAGCNGGLMTTAFEYTLKAGGLQLEKDYPYTGRNG-KC 232

Query: 243 KFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYL 302
            FDKS+IAA+VSNFSV+  DEDQ+AANL+KHGPLAVGINA WMQTY+ GVSCP IC K  
Sbjct: 233 HFDKSRIAASVSNFSVVGLDEDQIAANLLKHGPLAVGINAAWMQTYVRGVSCPLICFKRQ 292

Query: 303 DHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVA 362
           DHGVL+VGYGS GFAPIR K KPYWIIKNSWG+ WGE+GYYKIC G ++CGVD+MVS+V 
Sbjct: 293 DHGVLLVGYGSEGFAPIRLKNKPYWIIKNSWGKTWGEHGYYKICRGHHICGVDAMVSTVT 352

Query: 363 AIHTTS 368
           A HTT+
Sbjct: 353 ATHTTN 358


>gi|33945877|emb|CAE45588.1| papain-like cysteine proteinase-like protein 1 [Lotus japonicus]
          Length = 359

 Score =  551 bits (1421), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 259/341 (75%), Positives = 297/341 (87%), Gaps = 9/341 (2%)

Query: 28  DAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRR 87
           D MI QVV  +G       L AEHHF  FK +F K YAT+EEH YRF VFK+N+ RA+R 
Sbjct: 27  DPMICQVVDDEG-------LGAEHHFLEFKRRFGKVYATEEEHGYRFNVFKSNMHRARRH 79

Query: 88  QLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHG 147
           QLLDP+AVHGVT+FSDLTP EF+   LGL R + LP+DA  APILPT++LP DFDWR+HG
Sbjct: 80  QLLDPSAVHGVTQFSDLTPMEFQHSVLGL-RGVGLPSDADSAPILPTDNLPKDFDWREHG 138

Query: 148 AVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHE-CDPEESGSCDS 206
           AVT VK+QG+CGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDH+ CDPEE+GSCDS
Sbjct: 139 AVTPVKNQGSCGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHQQCDPEEAGSCDS 198

Query: 207 GCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQM 266
           GCNGGLMNSAFEYIL  GGV RE+DYPY+GT+GG+CKFDK+KIAA+V+NFSV+S DEDQ+
Sbjct: 199 GCNGGLMNSAFEYILNNGGVMREEDYPYSGTNGGTCKFDKAKIAASVANFSVVSRDEDQI 258

Query: 267 AANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPY 326
           AANLVK+GPLAV INAV+MQTY+GGVSCPY+C K L+HGVL+VGYGS  +APIR K+KPY
Sbjct: 259 AANLVKNGPLAVAINAVYMQTYVGGVSCPYVCSKKLNHGVLLVGYGSESYAPIRMKQKPY 318

Query: 327 WIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIHTT 367
           WIIKNSWGENWGENGYYKIC GRN+CGVDSMVS+VAA+HTT
Sbjct: 319 WIIKNSWGENWGENGYYKICRGRNICGVDSMVSTVAALHTT 359


>gi|94556727|gb|ABF46642.1| papain-like cysteine proteinase [Pachysandra terminalis]
          Length = 374

 Score =  551 bits (1419), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 272/367 (74%), Positives = 314/367 (85%), Gaps = 9/367 (2%)

Query: 5   ILSSLLLLLLSSVL-----ASAVAVND-DDAMIRQVVP-SDGEQSEDHLLNAEHHFSLFK 57
           +LS  +LLL SS L     AS V+ ++ DD +IRQVV  +D   ++D LLNAEHHFS FK
Sbjct: 3   LLSRFVLLLFSSSLVFAATASTVSSDESDDLLIRQVVAGADDHDNDDLLLNAEHHFSSFK 62

Query: 58  SKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLN 117
            +F K Y + +EHD RF VFKANLRRAKR Q+LDP+AVHGVT+F DLTP+EFRR +LGL 
Sbjct: 63  KRFGKAYTSCDEHDRRFGVFKANLRRAKRNQILDPSAVHGVTQFFDLTPAEFRRTYLGL- 121

Query: 118 RRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLS 177
           +RLRLPAD  +APILPTNDLP DFDWRDHGAVT VK+QG+CGSCWSFSATGALEGA+FL+
Sbjct: 122 KRLRLPADTHEAPILPTNDLPADFDWRDHGAVTPVKNQGSCGSCWSFSATGALEGANFLA 181

Query: 178 TGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGT 237
           TG+LVSLSEQQLVDCDH CD E+  SCDSGCNGGLM SAFEY LKAGG+ERE+DYPYTGT
Sbjct: 182 TGKLVSLSEQQLVDCDHVCDSEDPSSCDSGCNGGLMTSAFEYTLKAGGLEREEDYPYTGT 241

Query: 238 DGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYI 297
           D   CKFDK+KIA + SNFSV+S DE+Q+AANLV +GPLA+GINA++MQTYIGGVSCPYI
Sbjct: 242 DHSKCKFDKTKIAVSASNFSVVSLDENQIAANLVTNGPLAIGINAMFMQTYIGGVSCPYI 301

Query: 298 CGK-YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDS 356
           C K  LDHGVL+VGYGS+GFAPIRFKEKPYWIIKNSWGE+WGE GYYKIC GRN+CG+DS
Sbjct: 302 CSKRLLDHGVLLVGYGSAGFAPIRFKEKPYWIIKNSWGESWGEKGYYKICRGRNICGMDS 361

Query: 357 MVSSVAA 363
           MVS+VAA
Sbjct: 362 MVSAVAA 368


>gi|21593213|gb|AAM65162.1| cysteine proteinase RD19A [Arabidopsis thaliana]
          Length = 368

 Score =  551 bits (1419), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 265/371 (71%), Positives = 310/371 (83%), Gaps = 6/371 (1%)

Query: 1   MERLILS-SLLLLLLSSVLASAVAVND-DDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKS 58
           M+RL L  S+ +L    V  S+  VND DD +IRQVV      +E  +L +E HFSLFK 
Sbjct: 1   MDRLKLYFSVFVLSFFIVSVSSSDVNDGDDLVIRQVVGG----AEPQVLTSEDHFSLFKR 56

Query: 59  KFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNR 118
           KF K YA+ EEHDYRF VFKANLRRA+R Q LDP+A HGVT+FSDLT SEFR++ LG+  
Sbjct: 57  KFGKVYASNEEHDYRFSVFKANLRRARRHQKLDPSATHGVTQFSDLTRSEFRKKHLGVRS 116

Query: 119 RLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLST 178
             +LP DA KAPILPT +LP DFDWRDHGAVT VK+QG+CGSCWSFSATGALEGA+FL+T
Sbjct: 117 GFKLPKDANKAPILPTENLPEDFDWRDHGAVTPVKNQGSCGSCWSFSATGALEGANFLAT 176

Query: 179 GELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTD 238
           G+LVSLSEQQLVDCDHECDPEE+ SCDSGCNGGLMNSAFE+ LK GG+ +E+DYPYTG D
Sbjct: 177 GKLVSLSEQQLVDCDHECDPEEADSCDSGCNGGLMNSAFEHTLKTGGLMKEEDYPYTGKD 236

Query: 239 GGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYIC 298
           G +CK DKSKI A+VSNFSVIS DE+Q+AANLVK+GPLAV INA +MQTYIGGVSCPYIC
Sbjct: 237 GKTCKLDKSKIVASVSNFSVISIDEEQIAANLVKNGPLAVAINAGYMQTYIGGVSCPYIC 296

Query: 299 GKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMV 358
            + L+HGVL+VGYG++G+AP RFKEKPYWIIKNSWGE WGENG+YKIC GRN+CGVDSMV
Sbjct: 297 TRRLNHGVLLVGYGAAGYAPARFKEKPYWIIKNSWGETWGENGFYKICKGRNICGVDSMV 356

Query: 359 SSVAAIHTTSS 369
           S+VAA  +T++
Sbjct: 357 STVAATVSTTA 367


>gi|449516391|ref|XP_004165230.1| PREDICTED: cysteine proteinase RD19a-like [Cucumis sativus]
          Length = 387

 Score =  550 bits (1417), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 258/365 (70%), Positives = 307/365 (84%), Gaps = 4/365 (1%)

Query: 4   LILSSLLLLLLSSVLASAVAV-NDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSK 62
           +I +    L  S  L S  +V +D D +IRQVV +DG+ +  H L AEHHFSLFK +F K
Sbjct: 10  VITAVTATLCSSEPLVSQHSVEHDGDPLIRQVVENDGDFNH-HALGAEHHFSLFKRRFGK 68

Query: 63  TYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLN-RRLR 121
           +YAT+EEHD RF++FKAN+RRA+R Q  DP+A+HGVT+FSDLTP EFR+ FLGL   RLR
Sbjct: 69  SYATEEEHDRRFKIFKANMRRAERHQSFDPSAIHGVTQFSDLTPFEFRKAFLGLRGHRLR 128

Query: 122 LPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGEL 181
           LP D   APILPT +LP DFDWR HG VT VK+QG+CGSCWSFS TGALEGA+FL+TGEL
Sbjct: 129 LPVDTNAAPILPTENLPIDFDWRQHGGVTRVKNQGSCGSCWSFSTTGALEGANFLATGEL 188

Query: 182 VSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGS 241
           VSLSEQQLVDCDHECDPEE  +CDSGCNGGLMNSAFEY LKAGG+ +E+DYPY G D  +
Sbjct: 189 VSLSEQQLVDCDHECDPEEEDACDSGCNGGLMNSAFEYTLKAGGLMKEQDYPYAGIDRNT 248

Query: 242 CKFDKSKIAAAVSNFSVISS-DEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGK 300
           C FDKSKIAA+++NFSV++S DEDQ+AANLVK+GPLA+ INAV+MQTYIGGVSCP+IC K
Sbjct: 249 CNFDKSKIAASIANFSVVNSIDEDQIAANLVKNGPLAIAINAVFMQTYIGGVSCPFICSK 308

Query: 301 YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSS 360
            LDHGVL+VGYGS+G+APIR ++K YWIIKNSWGE+WGENGYYKIC GRN+CGVDS+VS+
Sbjct: 309 RLDHGVLLVGYGSAGYAPIRMRDKDYWIIKNSWGESWGENGYYKICRGRNICGVDSLVST 368

Query: 361 VAAIH 365
           VAA+H
Sbjct: 369 VAAVH 373


>gi|18141287|gb|AAL60581.1|AF454959_1 senescence-associated cysteine protease [Brassica oleracea]
          Length = 368

 Score =  550 bits (1416), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 263/364 (72%), Positives = 309/364 (84%), Gaps = 4/364 (1%)

Query: 1   MERLILS-SLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSK 59
           M+RL LS S+  LL   V AS+     DD +I+QVV  DG  +E ++L++E HFSLFK K
Sbjct: 1   MDRLKLSLSVFALLFIVVSASSDGNEGDDLVIKQVV--DG-GAEPNVLSSEDHFSLFKKK 57

Query: 60  FSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRR 119
           F K YA++EEHDYRF VFK+NLRRA+R Q LDP+A HGVT+FSDLT SEF+R+ LG+   
Sbjct: 58  FGKVYASREEHDYRFSVFKSNLRRARRHQKLDPSARHGVTQFSDLTRSEFKRKHLGVKGG 117

Query: 120 LRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTG 179
            +LP DA KAPILPT +LP +FDWR+ GAVT VK+QG+CGSCWSFSATGALEGA+FL+TG
Sbjct: 118 FKLPKDANKAPILPTENLPEEFDWRERGAVTPVKNQGSCGSCWSFSATGALEGANFLATG 177

Query: 180 ELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDG 239
           +LVSLSEQQLVDCDHECDPEE+GSCDSGCNGGLMNSAFEY LK GG+ RE+DYPYTG DG
Sbjct: 178 KLVSLSEQQLVDCDHECDPEEAGSCDSGCNGGLMNSAFEYTLKTGGLMREEDYPYTGKDG 237

Query: 240 GSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICG 299
            +CK DKSKI A+VSNFSVIS DE+Q+AANLVK+GPLAV INA +MQTYIGGVSCPYIC 
Sbjct: 238 ATCKLDKSKIVASVSNFSVISIDEEQIAANLVKNGPLAVAINAAYMQTYIGGVSCPYICM 297

Query: 300 KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVS 359
           + L+HGVL+VGYGS+G+AP RFKEKPYWIIKNSWGE WGE+G+YKIC GRNVCGVDS+VS
Sbjct: 298 RRLNHGVLLVGYGSAGYAPARFKEKPYWIIKNSWGETWGEDGFYKICRGRNVCGVDSLVS 357

Query: 360 SVAA 363
           +V A
Sbjct: 358 TVTA 361


>gi|18414611|ref|NP_567489.1| Papain family cysteine protease [Arabidopsis thaliana]
 gi|2244977|emb|CAB10398.1| cysteine proteinase like protein [Arabidopsis thaliana]
 gi|7268368|emb|CAB78661.1| cysteine proteinase like protein [Arabidopsis thaliana]
 gi|14517442|gb|AAK62611.1| AT4g16190/dl4135w [Arabidopsis thaliana]
 gi|22136546|gb|AAM91059.1| AT4g16190/dl4135w [Arabidopsis thaliana]
 gi|22530956|gb|AAM96982.1| cysteine proteinase [Arabidopsis thaliana]
 gi|23397184|gb|AAN31875.1| putative cysteine proteinase [Arabidopsis thaliana]
 gi|110740834|dbj|BAE98514.1| cysteine proteinase like protein [Arabidopsis thaliana]
 gi|332658313|gb|AEE83713.1| Papain family cysteine protease [Arabidopsis thaliana]
          Length = 373

 Score =  549 bits (1415), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 268/366 (73%), Positives = 313/366 (85%), Gaps = 5/366 (1%)

Query: 4   LILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKT 63
           LI ++LL   L S + S    +     IRQVVP   E++++ LLNAEHHF+LFKSK+ KT
Sbjct: 9   LIAATLLAGSLGSTVISGEVTDGFVNPIRQVVP---EENDEQLLNAEHHFTLFKSKYEKT 65

Query: 64  YATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRR-LRL 122
           YATQ EHD+RFRVFKANLRRA+R QLLDP+AVHGVT+FSDLTP EFRR+FLGL RR  RL
Sbjct: 66  YATQVEHDHRFRVFKANLRRARRNQLLDPSAVHGVTQFSDLTPKEFRRKFLGLKRRGFRL 125

Query: 123 PADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELV 182
           P D Q APILPT+DLPT+FDWR+ GAVT VK+QG CGSCWSFSA GALEGAHFL+T ELV
Sbjct: 126 PTDTQTAPILPTSDLPTEFDWREQGAVTPVKNQGMCGSCWSFSAIGALEGAHFLATKELV 185

Query: 183 SLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSC 242
           SLSEQQLVDCDHECDP ++ SCDSGC+GGLMN+AFEY LKAGG+ +E+DYPYTG D  +C
Sbjct: 186 SLSEQQLVDCDHECDPAQANSCDSGCSGGLMNNAFEYALKAGGLMKEEDYPYTGRDHTAC 245

Query: 243 KFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYL 302
           KFDKSKI A+VSNFSV+SSDEDQ+AANLV+HGPLA+ INA+WMQTYIGGVSCPY+C K  
Sbjct: 246 KFDKSKIVASVSNFSVVSSDEDQIAANLVQHGPLAIAINAMWMQTYIGGVSCPYVCSKSQ 305

Query: 303 DHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMG-RNVCGVDSMVSSV 361
           DHGVL+VG+GSSG+APIR KEKPYWIIKNSWG  WGE+GYYKIC G  N+CG+D+MVS+V
Sbjct: 306 DHGVLLVGFGSSGYAPIRLKEKPYWIIKNSWGAMWGEHGYYKICRGPHNMCGMDTMVSTV 365

Query: 362 AAIHTT 367
           AA+HT+
Sbjct: 366 AAVHTS 371


>gi|33945878|emb|CAE45589.1| papain-like cysteine proteinase-like protein 2 [Lotus japonicus]
          Length = 361

 Score =  549 bits (1415), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 259/341 (75%), Positives = 295/341 (86%), Gaps = 9/341 (2%)

Query: 28  DAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRR 87
           D MI QVV  +G       L AEHHF  FK +F K YAT+EEH YRF VFK+N+ RA+R 
Sbjct: 27  DPMICQVVDDEG-------LGAEHHFLEFKRRFGKVYATEEEHGYRFNVFKSNMHRARRH 79

Query: 88  QLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHG 147
           QLLDP+AVHGVT+FSDLTP EFR   LGL R + LP+DA  APILPT++LP DFDWR+HG
Sbjct: 80  QLLDPSAVHGVTRFSDLTPMEFRHSVLGL-RGVGLPSDADSAPILPTDNLPKDFDWREHG 138

Query: 148 AVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHE-CDPEESGSCDS 206
           AVT VK+QG+CGSCWSFSATGALEGAHFLSTG+LVSLSEQQLVDCDHE CDPEE+GSCDS
Sbjct: 139 AVTPVKNQGSCGSCWSFSATGALEGAHFLSTGKLVSLSEQQLVDCDHEQCDPEEAGSCDS 198

Query: 207 GCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQM 266
           GC GGLMNSAFEYIL  GGV RE+DYPY+GT GG+CKFD++KIAA+V+NFSV+S DEDQ+
Sbjct: 199 GCKGGLMNSAFEYILNNGGVMREEDYPYSGTAGGTCKFDQTKIAASVANFSVVSRDEDQI 258

Query: 267 AANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPY 326
           AANLVK+GPLAV INAV+MQTY+GGVSCPY+C K L+HGVL+VGYGS  +APIR K+KPY
Sbjct: 259 AANLVKNGPLAVAINAVYMQTYVGGVSCPYVCSKKLNHGVLLVGYGSESYAPIRMKQKPY 318

Query: 327 WIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIHTT 367
           WIIKNSWGENWGENGYYKIC GRNVCGVDSMVS+VAA+HTT
Sbjct: 319 WIIKNSWGENWGENGYYKICRGRNVCGVDSMVSTVAALHTT 359


>gi|164605519|dbj|BAF98585.1| CM0216.510.nc [Lotus japonicus]
          Length = 360

 Score =  547 bits (1410), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 255/342 (74%), Positives = 295/342 (86%), Gaps = 8/342 (2%)

Query: 28  DAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRR 87
           D +IRQVV  +G       L AEHHF  FK +F K Y ++EEH YRF VFK+N+ RA+R 
Sbjct: 27  DPLIRQVVDGEG-------LGAEHHFLEFKRRFGKVYVSEEEHGYRFNVFKSNMHRARRH 79

Query: 88  QLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHG 147
           QLLDP+AVHGVT+FSDLTP EFR   LGL R + LP+DA  APIL T++LP DFDWR+HG
Sbjct: 80  QLLDPSAVHGVTRFSDLTPMEFRHSVLGL-RGVGLPSDADSAPILRTDNLPKDFDWREHG 138

Query: 148 AVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSG 207
           AVT VK+QG+CG+CWSFSATGALEGAHFLSTG+LVSLSEQQLVDCDHECDPEE+GSCDSG
Sbjct: 139 AVTPVKNQGSCGACWSFSATGALEGAHFLSTGKLVSLSEQQLVDCDHECDPEEAGSCDSG 198

Query: 208 CNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMA 267
           C GGLMNSAFEYIL  GGV RE+DYPY+GT GG+CKFD++KIAA+V+NFSV+S DEDQ+A
Sbjct: 199 CKGGLMNSAFEYILNNGGVMREEDYPYSGTAGGTCKFDQTKIAASVANFSVVSRDEDQIA 258

Query: 268 ANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYW 327
           ANLVK+GPLAV INAV+MQTY+GGVSCPY+C K L+HGVL+VGYGS  +APIR K+KPYW
Sbjct: 259 ANLVKNGPLAVAINAVYMQTYVGGVSCPYVCSKKLNHGVLLVGYGSESYAPIRMKQKPYW 318

Query: 328 IIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIHTTSS 369
           IIKNSWGENWGENGYYKIC GRNVCGVDSMVS+VAA+HTT +
Sbjct: 319 IIKNSWGENWGENGYYKICRGRNVCGVDSMVSTVAALHTTGN 360


>gi|225458119|ref|XP_002279862.1| PREDICTED: cysteine proteinase RD19a [Vitis vinifera]
 gi|302142581|emb|CBI19784.3| unnamed protein product [Vitis vinifera]
          Length = 368

 Score =  546 bits (1408), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 259/343 (75%), Positives = 294/343 (85%), Gaps = 7/343 (2%)

Query: 27  DDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKR 86
           D+ MIRQV     E   D  LNAE HF  FK++F KTYAT EEHDYRF VFKANLRRAKR
Sbjct: 31  DNLMIRQV-----ESHVDDFLNAERHFEKFKARFQKTYATPEEHDYRFNVFKANLRRAKR 85

Query: 87  RQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDH 146
            QLLDP+AVHGVT+FSDLTP+EFRR +LGLN  LR PADAQ+APILPT++LPTDFDWR++
Sbjct: 86  HQLLDPSAVHGVTQFSDLTPAEFRRDYLGLNP-LRFPADAQQAPILPTDNLPTDFDWREN 144

Query: 147 GAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDS 206
           GAVT VK+QG CGSCWSFS  GALEGAHFL+TG L SLSEQQLVDCD ECDPEE  +CD 
Sbjct: 145 GAVTPVKNQGNCGSCWSFSTIGALEGAHFLATGNLESLSEQQLVDCDRECDPEEYDACDD 204

Query: 207 GCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQM 266
           GCNGGLMN+AFEYILK GGVEREKDYPYTG D   CKF++SKI A+VSNFSV+S DEDQ+
Sbjct: 205 GCNGGLMNNAFEYILKTGGVEREKDYPYTGRDRSPCKFNESKIVASVSNFSVVSIDEDQI 264

Query: 267 AANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPY 326
           AANLVK+GPLAVGINAV+MQTY  GVSCP++C   LDHGVL+VGYGS+G++PIRFKEKPY
Sbjct: 265 AANLVKNGPLAVGINAVFMQTYTAGVSCPFLCSGELDHGVLLVGYGSAGYSPIRFKEKPY 324

Query: 327 WIIKNSWGENWGENGYYKICMGRNVCGVDSMVSS-VAAIHTTS 368
           WI+KNSW + WGE+GYY+IC G+N+CGVDSMVSS VAAI TTS
Sbjct: 325 WILKNSWSKYWGEHGYYRICRGQNMCGVDSMVSSVVAAIQTTS 367


>gi|3377952|emb|CAA08906.1| cysteine proteinase [Cicer arietinum]
          Length = 362

 Score =  546 bits (1406), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 268/356 (75%), Positives = 311/356 (87%), Gaps = 8/356 (2%)

Query: 16  SVLASAVAV-NDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRF 74
           SV+A+A    N+DD +IRQV     +  +D LLNAEHHF+ FKSKFSK+YAT+EEHDYRF
Sbjct: 13  SVVATATKDDNNDDFLIRQVT----DHEDDQLLNAEHHFTTFKSKFSKSYATKEEHDYRF 68

Query: 75  RVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPT 134
            VFK+NL++AK  Q LDP+A HGVTKFSDLT SEFRRQFLGL +RLRLPA AQKAPILPT
Sbjct: 69  GVFKSNLKKAKLHQKLDPSAEHGVTKFSDLTASEFRRQFLGLKKRLRLPAHAQKAPILPT 128

Query: 135 NDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDH 194
           N+LP DFDWR+ GAVT VKDQG+CGSCW+FS TGALEGA++L+TG+LVSLSEQQLVDCDH
Sbjct: 129 NNLPEDFDWREKGAVTPVKDQGSCGSCWAFSTTGALEGANYLATGKLVSLSEQQLVDCDH 188

Query: 195 ECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVS 254
            CDP+E  SCDSGCNGGLMN+AFEY+L++GGV RE+DY YTG D GSCKFDKSKIAA+VS
Sbjct: 189 VCDPDEYNSCDSGCNGGLMNNAFEYLLQSGGVVREQDYSYTGRD-GSCKFDKSKIAASVS 247

Query: 255 NFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGK-YLDHGVLIVGYGS 313
           NFSV+S DEDQ+AANLVK+GPLAV INA WMQTY+ GVSCPYIC K  LDHGVL+VG+G 
Sbjct: 248 NFSVVSVDEDQIAANLVKNGPLAVAINAAWMQTYMSGVSCPYICAKSRLDHGVLLVGFG- 306

Query: 314 SGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIHTTSS 369
           +GFAPIR KEKPYWIIKNSWG+NWGE GYYKIC GRN+CGVDSMVS+VAA+H +++
Sbjct: 307 NGFAPIRLKEKPYWIIKNSWGQNWGEEGYYKICRGRNICGVDSMVSTVAAVHASNN 362


>gi|18399697|ref|NP_565512.1| putative cysteine proteinase A494 [Arabidopsis thaliana]
 gi|12643282|sp|P43295.2|A494_ARATH RecName: Full=Probable cysteine proteinase A494; Flags: Precursor
 gi|4567274|gb|AAD23687.1| cysteine proteinase [Arabidopsis thaliana]
 gi|116325924|gb|ABJ98563.1| At2g21430 [Arabidopsis thaliana]
 gi|330252083|gb|AEC07177.1| putative cysteine proteinase A494 [Arabidopsis thaliana]
          Length = 361

 Score =  542 bits (1396), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 256/363 (70%), Positives = 299/363 (82%), Gaps = 6/363 (1%)

Query: 6   LSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYA 65
           L  L  + L  V  S     D+D +IRQVV    +++E  +L++E HF+LFK KF K Y 
Sbjct: 5   LRVLFSVSLIFVFVSVSVCGDEDVLIRQVV----DETEPKVLSSEDHFTLFKKKFGKVYG 60

Query: 66  TQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPAD 125
           + EEH YRF VFKANL RA R Q +DP+A HGVT+FSDLT SEFRR+ LG+    +LP D
Sbjct: 61  SIEEHYYRFSVFKANLLRAMRHQKMDPSARHGVTQFSDLTRSEFRRKHLGVKGGFKLPKD 120

Query: 126 AQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLS 185
           A +APILPT +LP +FDWRD GAVT VK+QG+CGSCWSFS TGALEGAHFL+TG+LVSLS
Sbjct: 121 ANQAPILPTQNLPEEFDWRDRGAVTPVKNQGSCGSCWSFSTTGALEGAHFLATGKLVSLS 180

Query: 186 EQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFD 245
           EQQLVDCDHECDPEE GSCDSGCNGGLMNSAFEY LK GG+ REKDYPYTGTDGGSCK D
Sbjct: 181 EQQLVDCDHECDPEEEGSCDSGCNGGLMNSAFEYTLKTGGLMREKDYPYTGTDGGSCKLD 240

Query: 246 KSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHG 305
           +SKI A+VSNFSV+S +EDQ+AANL+K+GPLAV INA +MQTYIGGVSCPYIC + L+HG
Sbjct: 241 RSKIVASVSNFSVVSINEDQIAANLIKNGPLAVAINAAYMQTYIGGVSCPYICSRRLNHG 300

Query: 306 VLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIH 365
           VL+VGYGS+GF+  R KEKPYWIIKNSWGE+WGENG+YKIC GRN+CGVDS+VS+VAA  
Sbjct: 301 VLLVGYGSAGFSQARLKEKPYWIIKNSWGESWGENGFYKICKGRNICGVDSLVSTVAA-- 358

Query: 366 TTS 368
           TTS
Sbjct: 359 TTS 361


>gi|297824991|ref|XP_002880378.1| hypothetical protein ARALYDRAFT_481008 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297326217|gb|EFH56637.1| hypothetical protein ARALYDRAFT_481008 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 360

 Score =  540 bits (1392), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 254/361 (70%), Positives = 301/361 (83%), Gaps = 8/361 (2%)

Query: 3   RLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSK 62
           R++ S  LL     V  S     D+D +IRQVV    +++E  +L++E HF+LFK KF K
Sbjct: 5   RVLFSVSLLF----VFVSVSICGDEDLLIRQVV----DEAEPKVLSSEDHFTLFKKKFGK 56

Query: 63  TYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRL 122
            Y + EEH YRF VFKANLRRA R Q +DP+A HGVT+FSDLT SEFRR+ LG+    +L
Sbjct: 57  DYGSIEEHYYRFSVFKANLRRAMRHQKMDPSARHGVTQFSDLTGSEFRRKHLGVTGGFKL 116

Query: 123 PADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELV 182
           P DA +APILPT++LP +FDWRD GAVT VK+QG+CGSCWSFS TGALEGAHFL+TG+LV
Sbjct: 117 PKDANQAPILPTHNLPEEFDWRDRGAVTPVKNQGSCGSCWSFSTTGALEGAHFLATGKLV 176

Query: 183 SLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSC 242
           SLSEQQLVDCDHECDPEE+GSCDSGCNGGLMNSAFEY LK GG+ RE+DYPYTGTDGGSC
Sbjct: 177 SLSEQQLVDCDHECDPEEAGSCDSGCNGGLMNSAFEYTLKTGGLMREEDYPYTGTDGGSC 236

Query: 243 KFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYL 302
           K D+SKI A+VSNFSV+S +EDQ+AANLVK+GPLAV INA +MQTYIGGVSCPYIC + L
Sbjct: 237 KLDRSKIVASVSNFSVVSINEDQIAANLVKNGPLAVAINAAYMQTYIGGVSCPYICSRRL 296

Query: 303 DHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVA 362
           +HGVL++GYGSSG++  R KEKPYWIIKNSWGE+WGENG+YKIC GRN+CGVDS+VS+VA
Sbjct: 297 NHGVLLMGYGSSGYSQARLKEKPYWIIKNSWGESWGENGFYKICKGRNICGVDSLVSTVA 356

Query: 363 A 363
           A
Sbjct: 357 A 357


>gi|51969854|dbj|BAD43619.1| putative cysteine proteinase [Arabidopsis thaliana]
          Length = 361

 Score =  539 bits (1388), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 255/363 (70%), Positives = 298/363 (82%), Gaps = 6/363 (1%)

Query: 6   LSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYA 65
           L  L  + L  V  S     D+D +IRQVV    +++E  +L++E HF+LFK KF K Y 
Sbjct: 5   LRVLFSVSLIFVFVSVSVCGDEDVLIRQVV----DETEPKVLSSEDHFTLFKKKFGKVYG 60

Query: 66  TQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPAD 125
           + EEH YRF VFKANL RA R Q +DP+A HGVT+FSDLT SEFRR+ LG+    +LP D
Sbjct: 61  SIEEHYYRFSVFKANLLRAMRHQKMDPSARHGVTQFSDLTRSEFRRKHLGVKGGFKLPKD 120

Query: 126 AQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLS 185
           A +APILPT +LP +FDWRD GAVT VK+QG+CGSCWSFS TGALEGAHFL+TG+LVSLS
Sbjct: 121 ANQAPILPTQNLPEEFDWRDRGAVTPVKNQGSCGSCWSFSTTGALEGAHFLATGKLVSLS 180

Query: 186 EQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFD 245
           EQQLVDCDHECDPEE GSCDSGCNG LMNSAFEY LK GG+ REKDYPYTGTDGGSCK D
Sbjct: 181 EQQLVDCDHECDPEEEGSCDSGCNGRLMNSAFEYTLKTGGLMREKDYPYTGTDGGSCKLD 240

Query: 246 KSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHG 305
           +SKI A+VSNFSV+S +EDQ+AANL+K+GPLAV INA +MQTYIGGVSCPYIC + L+HG
Sbjct: 241 RSKIVASVSNFSVVSINEDQIAANLIKNGPLAVAINAAYMQTYIGGVSCPYICSRRLNHG 300

Query: 306 VLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIH 365
           VL+VGYGS+GF+  R KEKPYWIIKNSWGE+WGENG+YKIC GRN+CGVDS+VS+VAA  
Sbjct: 301 VLLVGYGSAGFSQARLKEKPYWIIKNSWGESWGENGFYKICKGRNICGVDSLVSTVAA-- 358

Query: 366 TTS 368
           TTS
Sbjct: 359 TTS 361


>gi|449461649|ref|XP_004148554.1| PREDICTED: LOW QUALITY PROTEIN: cysteine proteinase RD19a-like
           [Cucumis sativus]
          Length = 381

 Score =  530 bits (1364), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 251/365 (68%), Positives = 300/365 (82%), Gaps = 10/365 (2%)

Query: 4   LILSSLLLLLLSSVLASAVAV-NDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSK 62
           +I +    L  S  L S  +V +D D +IRQVV +DG+ +  H L AEHHFSLFK +F K
Sbjct: 10  VITAVTATLCSSEPLVSQHSVEHDGDPLIRQVVENDGDFNH-HALGAEHHFSLFKRRFGK 68

Query: 63  TYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLN-RRLR 121
           +YAT+EEHD RF++FKAN+RRA+R Q  DP+A+HGVT+FSDLTP EFR+ FLGL   RLR
Sbjct: 69  SYATEEEHDRRFKIFKANMRRAERHQSFDPSAIHGVTQFSDLTPFEFRKAFLGLRGHRLR 128

Query: 122 LPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGEL 181
           LP D   APILPT +LP DFDWR HG VT VK+QG+CGSCWSFS TGALEGA+FL     
Sbjct: 129 LPVDTNAAPILPTENLPIDFDWRQHGGVTRVKNQGSCGSCWSFSTTGALEGANFL----- 183

Query: 182 VSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGS 241
             LSEQQLVDCDHECDPEE  +CDSGCNGGLMNSAFEY LKAGG+ +E+DYPY G D  +
Sbjct: 184 -XLSEQQLVDCDHECDPEEEDACDSGCNGGLMNSAFEYTLKAGGLMKEQDYPYAGIDRNT 242

Query: 242 CKFDKSKIAAAVSNFSVISS-DEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGK 300
           C FDKSKIAA++++FSV++S DEDQ+AANLVK+GPLA+ INAV+MQTYIGGVSCP+IC K
Sbjct: 243 CNFDKSKIAASIASFSVVNSIDEDQIAANLVKNGPLAIAINAVFMQTYIGGVSCPFICSK 302

Query: 301 YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSS 360
            LDHGVL+VGYGS+G+APIR ++K YWIIKNSWGE+WGENGYYKIC GRN+CGVDS+VS+
Sbjct: 303 RLDHGVLLVGYGSAGYAPIRMRDKDYWIIKNSWGESWGENGYYKICRGRNICGVDSLVST 362

Query: 361 VAAIH 365
           VAA+H
Sbjct: 363 VAAVH 367


>gi|25956267|dbj|BAC41322.1| hypothetical protein [Lotus japonicus]
          Length = 358

 Score =  528 bits (1361), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 258/340 (75%), Positives = 295/340 (86%), Gaps = 8/340 (2%)

Query: 28  DAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRR 87
           D MI QVV  +G       L AEHHF  FK +F K YAT+EEH YRF VFK+N+ RA+R 
Sbjct: 27  DPMICQVVDDEG-------LGAEHHFLEFKRRFGKVYATEEEHGYRFNVFKSNMHRARRH 79

Query: 88  QLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHG 147
           QLLDP+AVHGVT+FSDLTP EF+   LGL R + LP+DA  APILPT++LP DFDWR HG
Sbjct: 80  QLLDPSAVHGVTQFSDLTPMEFQHSVLGL-RGVGLPSDADSAPILPTDNLPKDFDWRGHG 138

Query: 148 AVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSG 207
           AVT VK+QG+CGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDH+CDPEE+GSC SG
Sbjct: 139 AVTPVKNQGSCGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHQCDPEEAGSCGSG 198

Query: 208 CNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMA 267
           CNGGLMNSAFEYIL  GGV RE+DYPY+GT+GG+CKFDK+KIAA+V+NFSV+S DEDQ+A
Sbjct: 199 CNGGLMNSAFEYILNNGGVMREEDYPYSGTNGGTCKFDKAKIAASVANFSVVSRDEDQIA 258

Query: 268 ANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYW 327
           ANLVK+GPLAV INAV+MQTY+GGVSCPY+C K L+HGVL+VGYGS  +APIR K+KPYW
Sbjct: 259 ANLVKNGPLAVAINAVYMQTYVGGVSCPYVCSKKLNHGVLLVGYGSESYAPIRMKQKPYW 318

Query: 328 IIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIHTT 367
           IIKNSWGENWGENGYYKIC GRN+CGVDSMVS+VAA+HTT
Sbjct: 319 IIKNSWGENWGENGYYKICRGRNICGVDSMVSTVAALHTT 358


>gi|357162946|ref|XP_003579573.1| PREDICTED: cysteine proteinase 1-like [Brachypodium distachyon]
          Length = 376

 Score =  518 bits (1334), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 249/376 (66%), Positives = 300/376 (79%), Gaps = 13/376 (3%)

Query: 1   MERLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKF 60
           + RL +    +LLLS V A +  V  +D +I QVV   G++  +  LNAE HF+ F  +F
Sbjct: 4   LRRLPIVVAAVLLLSGVAALSSPV--EDPLIEQVV--GGDEKNELELNAEAHFASFVQRF 59

Query: 61  SKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRL 120
           +K+Y   +EH +R  VF ANLRRA+R Q LDP+AVHGVTKFSDLTP EFR +FLGL +  
Sbjct: 60  NKSYRDADEHAHRLSVFTANLRRARRHQRLDPSAVHGVTKFSDLTPDEFRDRFLGLRKYR 119

Query: 121 R-----LPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHF 175
           R     L   A  AP LPT+ LPT+FDWR+HGAV  VKDQG+CGSCWSFS +GALEGAH+
Sbjct: 120 RSFLKGLSGSAHDAPALPTDGLPTEFDWREHGAVGPVKDQGSCGSCWSFSTSGALEGAHY 179

Query: 176 LSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYT 235
           L+TG+L  LSEQQ+VDCDHECDP E  +CD+GCNGGLM +AF Y+ KAGG+E EKDYPYT
Sbjct: 180 LATGKLEVLSEQQMVDCDHECDPSEPRACDAGCNGGLMTTAFSYLAKAGGLETEKDYPYT 239

Query: 236 GTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCP 295
           G  GG+CKFDKSKIAA V NFS ++ DEDQ+AANLVKHGPLA+GINAV+MQTYIGGVSCP
Sbjct: 240 GR-GGACKFDKSKIAAQVKNFSTVAVDEDQIAANLVKHGPLAIGINAVFMQTYIGGVSCP 298

Query: 296 YICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMG---RNVC 352
           +ICG++LDHGVL+VGYGS+G+AP+RFKEKPYWIIKNSWGENWGE+GYYKIC G   +N C
Sbjct: 299 FICGRHLDHGVLLVGYGSAGYAPLRFKEKPYWIIKNSWGENWGESGYYKICRGAHVKNKC 358

Query: 353 GVDSMVSSVAAIHTTS 368
           GVDSMVS+V AIHT++
Sbjct: 359 GVDSMVSTVTAIHTSN 374


>gi|194705198|gb|ACF86683.1| unknown [Zea mays]
 gi|413936851|gb|AFW71402.1| cysteine protease1 [Zea mays]
          Length = 371

 Score =  517 bits (1331), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 245/349 (70%), Positives = 284/349 (81%), Gaps = 11/349 (3%)

Query: 27  DDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKR 86
           +D +IRQVVP  G    D  LNAE HF  F  +F K+Y   +EH YR  VFKANLRRA+R
Sbjct: 24  EDPLIRQVVP--GGDDNDLELNAESHFLSFVQRFGKSYKDADEHAYRLSVFKANLRRARR 81

Query: 87  RQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLR-----LPADAQKAPILPTNDLPTDF 141
            QLLDP+A HGVTKFSDLTP+EFRR +LGL +  R     L   A +AP+LPT+ LP DF
Sbjct: 82  HQLLDPSAEHGVTKFSDLTPAEFRRTYLGLRKSRRALLRELGESAHEAPVLPTDGLPDDF 141

Query: 142 DWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEES 201
           DWRDHGAV  VK+QG+CGSCWSFSA+GALEGAH+L+TG+L  LSEQQ VDCDHECD  E 
Sbjct: 142 DWRDHGAVGPVKNQGSCGSCWSFSASGALEGAHYLATGKLEVLSEQQFVDCDHECDSSEP 201

Query: 202 GSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISS 261
            SCDSGCNGGLM +AF Y+ KAGG+E EKDYPYTG+DG  CKFDKSKI A+V NFSV+S 
Sbjct: 202 DSCDSGCNGGLMTTAFSYLQKAGGLESEKDYPYTGSDG-KCKFDKSKIVASVQNFSVVSV 260

Query: 262 DEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRF 321
           DE Q++ANL+KHGPLA+GINA +MQTYIGGVSCPYICG++LDHGVL+VGYG+SGFAPIR 
Sbjct: 261 DEAQISANLIKHGPLAIGINAAYMQTYIGGVSCPYICGRHLDHGVLLVGYGASGFAPIRL 320

Query: 322 KEKPYWIIKNSWGENWGENGYYKICMG---RNVCGVDSMVSSVAAIHTT 367
           K+KPYWIIKNSWGENWGENGYYKIC G   RN CGVDSMVS+V+A+H +
Sbjct: 321 KDKPYWIIKNSWGENWGENGYYKICRGSNVRNKCGVDSMVSTVSAVHAS 369


>gi|357148994|ref|XP_003574963.1| PREDICTED: cysteine proteinase 1-like [Brachypodium distachyon]
          Length = 377

 Score =  516 bits (1330), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 246/360 (68%), Positives = 286/360 (79%), Gaps = 11/360 (3%)

Query: 16  SVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFR 75
           S  A+     D+D +IRQVV   G   +D+ L    HF+ F  +F KTY   EEH +R  
Sbjct: 18  SPAAATATAGDEDPLIRQVV--GGADGDDNDLELSSHFTSFVQRFGKTYKDAEEHAHRLS 75

Query: 76  VFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLR-----LPADAQKAP 130
           VFKANLRRA+R QLLDP+A HG+TKFSDLTP+EFRR FLGL    R     +   A  AP
Sbjct: 76  VFKANLRRARRHQLLDPSAEHGITKFSDLTPAEFRRTFLGLKTSRRSFLREIGGSAHDAP 135

Query: 131 ILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLV 190
           +LPT+ LP DFDWRDHGAV  VK+QG+CGSCWSFSA+GALEGA++L+TG++  LSEQQ V
Sbjct: 136 VLPTDGLPDDFDWRDHGAVGPVKNQGSCGSCWSFSASGALEGANYLATGKMEVLSEQQFV 195

Query: 191 DCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIA 250
           DCDHECDPEE  SCD+GCNGGLM SAF Y+LK+GG+EREKDYPYTG DG +CKFDKSKI 
Sbjct: 196 DCDHECDPEEPDSCDAGCNGGLMTSAFSYLLKSGGLEREKDYPYTGRDG-TCKFDKSKIV 254

Query: 251 AAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVG 310
           A+V NFSV+S DE+Q+AANLVKHGPLA+GINA +MQTYIGGVSCPYICG+ LDHGVL+VG
Sbjct: 255 ASVQNFSVVSVDEEQIAANLVKHGPLAIGINAAYMQTYIGGVSCPYICGRSLDHGVLLVG 314

Query: 311 YGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMG---RNVCGVDSMVSSVAAIHTT 367
           YG+SGFAP R K KPYW+IKNSWGENWGE GYYKIC G   RN CGVDSMVS+VAA HT+
Sbjct: 315 YGASGFAPSRLKNKPYWVIKNSWGENWGEKGYYKICRGSNVRNKCGVDSMVSTVAAAHTS 374


>gi|516865|emb|CAA52403.1| putative thiol protease [Arabidopsis thaliana]
          Length = 313

 Score =  514 bits (1324), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 239/315 (75%), Positives = 273/315 (86%), Gaps = 2/315 (0%)

Query: 54  SLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQF 113
           +LFK KF K Y + EEH YRF VFKANL RA R Q +DP+A HGVT+FSDLT SEFRR+ 
Sbjct: 1   ALFKKKFGKVYGSIEEHYYRFSVFKANLLRAMRHQKMDPSARHGVTQFSDLTRSEFRRKH 60

Query: 114 LGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGA 173
           LG+    +LP DA +APILPT +LP +FDWRD GAVT VK+QG+CGSCWSFS TGALEGA
Sbjct: 61  LGVKGGFKLPKDANQAPILPTQNLPEEFDWRDRGAVTPVKNQGSCGSCWSFSTTGALEGA 120

Query: 174 HFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYP 233
           HFL+TG+LVSLSEQQLVDCDHECDPEE GSCDSGCNGGLMNSAFEY LK GG+ REKDYP
Sbjct: 121 HFLATGKLVSLSEQQLVDCDHECDPEEEGSCDSGCNGGLMNSAFEYTLKTGGLMREKDYP 180

Query: 234 YTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVS 293
           YTGTDGGSCK D+SKI A+VSNFSV+S +EDQ+AANL+K+GPLAV INA +MQTYIGGVS
Sbjct: 181 YTGTDGGSCKLDRSKIVASVSNFSVVSINEDQIAANLIKNGPLAVAINAAYMQTYIGGVS 240

Query: 294 CPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCG 353
           CPYIC + L+HGVL+VGYGS+GF+  R KEKPYWIIKNSWGE+WGENG+YKIC GRN+CG
Sbjct: 241 CPYICSRRLNHGVLLVGYGSAGFSQARLKEKPYWIIKNSWGESWGENGFYKICKGRNICG 300

Query: 354 VDSMVSSVAAIHTTS 368
           VDS+VS+VAA  TTS
Sbjct: 301 VDSLVSTVAA--TTS 313


>gi|162459555|ref|NP_001105685.1| cysteine proteinase 1 precursor [Zea mays]
 gi|1706260|sp|Q10716.1|CYSP1_MAIZE RecName: Full=Cysteine proteinase 1; Flags: Precursor
 gi|643597|dbj|BAA08244.1| cysteine proteinase [Zea mays]
          Length = 371

 Score =  514 bits (1324), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 244/349 (69%), Positives = 283/349 (81%), Gaps = 11/349 (3%)

Query: 27  DDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKR 86
           +D +IRQVVP  G    D  LNAE HF  F  +F K+Y   +EH YR  VFK NLRRA+R
Sbjct: 24  EDPLIRQVVP--GGDDNDLELNAESHFLSFVQRFGKSYKDADEHAYRLSVFKDNLRRARR 81

Query: 87  RQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLR-----LPADAQKAPILPTNDLPTDF 141
            QLLDP+A HGVTKFSDLTP+EFRR +LGL +  R     L   A +AP+LPT+ LP DF
Sbjct: 82  HQLLDPSAEHGVTKFSDLTPAEFRRTYLGLRKSRRALLRELGESAHEAPVLPTDGLPDDF 141

Query: 142 DWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEES 201
           DWRDHGAV  VK+QG+CGSCWSFSA+GALEGAH+L+TG+L  LSEQQ VDCDHECD  E 
Sbjct: 142 DWRDHGAVGPVKNQGSCGSCWSFSASGALEGAHYLATGKLEVLSEQQFVDCDHECDSSEP 201

Query: 202 GSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISS 261
            SCDSGCNGGLM +AF Y+ KAGG+E EKDYPYTG+DG  CKFDKSKI A+V NFSV+S 
Sbjct: 202 DSCDSGCNGGLMTTAFSYLQKAGGLESEKDYPYTGSDG-KCKFDKSKIVASVQNFSVVSV 260

Query: 262 DEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRF 321
           DE Q++ANL+KHGPLA+GINA +MQTYIGGVSCPYICG++LDHGVL+VGYG+SGFAPIR 
Sbjct: 261 DEAQISANLIKHGPLAIGINAAYMQTYIGGVSCPYICGRHLDHGVLLVGYGASGFAPIRL 320

Query: 322 KEKPYWIIKNSWGENWGENGYYKICMG---RNVCGVDSMVSSVAAIHTT 367
           K+KPYWIIKNSWGENWGENGYYKIC G   RN CGVDSMVS+V+A+H +
Sbjct: 321 KDKPYWIIKNSWGENWGENGYYKICRGSNVRNKCGVDSMVSTVSAVHAS 369


>gi|115446097|ref|NP_001046828.1| Os02g0469600 [Oryza sativa Japonica Group]
 gi|47497527|dbj|BAD19579.1| putative cysteine proteinase 1 precursor [Oryza sativa Japonica
           Group]
 gi|113536359|dbj|BAF08742.1| Os02g0469600 [Oryza sativa Japonica Group]
 gi|215701326|dbj|BAG92750.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215704370|dbj|BAG93804.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215708762|dbj|BAG94031.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|218200777|gb|EEC83204.1| hypothetical protein OsI_28465 [Oryza sativa Indica Group]
 gi|222622835|gb|EEE56967.1| hypothetical protein OsJ_06681 [Oryza sativa Japonica Group]
          Length = 373

 Score =  511 bits (1315), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 244/361 (67%), Positives = 291/361 (80%), Gaps = 11/361 (3%)

Query: 15  SSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRF 74
           S  +A+A    +++ +IRQVV   G    +  LNAE HF+ F  +F K+Y   +EH YR 
Sbjct: 14  SPAVAAASVPGEEEPLIRQVV--GGGDDNELELNAERHFASFVQRFGKSYRDADEHAYRL 71

Query: 75  RVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLR-----LPADAQKA 129
            VFKANLRRA+R QLLDP+A HGVTKFSDLTP+EFRR +LGL    R     L   A +A
Sbjct: 72  SVFKANLRRARRHQLLDPSAEHGVTKFSDLTPAEFRRAYLGLRTSRRAFLRGLGGSAHEA 131

Query: 130 PILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQL 189
           P+LPT+ LP DFDWRDHGAV  VK+QG+CGSCWSFSA+GALEGA++L+TG++  LSEQQ+
Sbjct: 132 PVLPTDGLPDDFDWRDHGAVGPVKNQGSCGSCWSFSASGALEGANYLATGKMDVLSEQQM 191

Query: 190 VDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKI 249
           VDCDHECD  E  SCD+GCNGGLM +AF Y+LK+GG+E EKDYPYTG DG +CKFDKSKI
Sbjct: 192 VDCDHECDSSEPDSCDAGCNGGLMTNAFSYLLKSGGLESEKDYPYTGRDG-TCKFDKSKI 250

Query: 250 AAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIV 309
             +V NFSV+S DEDQ+AANLVKHGPLA+GINA +MQTYIGGVSCPYICG++LDHGVL+V
Sbjct: 251 VTSVQNFSVVSVDEDQIAANLVKHGPLAIGINAAYMQTYIGGVSCPYICGRHLDHGVLLV 310

Query: 310 GYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMG---RNVCGVDSMVSSVAAIHT 366
           GYG+SGFAPIR K+K YWIIKNSWGENWGE+GYYKIC G   RN CGVDSMVS+V+AIHT
Sbjct: 311 GYGASGFAPIRLKDKAYWIIKNSWGENWGEHGYYKICRGSNVRNKCGVDSMVSTVSAIHT 370

Query: 367 T 367
           +
Sbjct: 371 S 371


>gi|242061538|ref|XP_002452058.1| hypothetical protein SORBIDRAFT_04g017830 [Sorghum bicolor]
 gi|241931889|gb|EES05034.1| hypothetical protein SORBIDRAFT_04g017830 [Sorghum bicolor]
          Length = 371

 Score =  511 bits (1315), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 242/349 (69%), Positives = 282/349 (80%), Gaps = 11/349 (3%)

Query: 27  DDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKR 86
           +D +IRQVVP  G    +  LNAE HF  F  +F K+Y   EEH YR  +FKANLRRA+R
Sbjct: 24  EDPLIRQVVP--GGDDNELELNAESHFLSFVQRFGKSYKDAEEHAYRLSIFKANLRRARR 81

Query: 87  RQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLR-----LPADAQKAPILPTNDLPTDF 141
            QLLDP+A HGVTKFSDLTP+EFRR +LGL +  R     L   A +AP+LPT+ LP DF
Sbjct: 82  HQLLDPSAEHGVTKFSDLTPAEFRRTYLGLRKSRRALLRELGKSANEAPVLPTDGLPDDF 141

Query: 142 DWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEES 201
           DWRDHGAVT VK+QG+CGSCWSFS +GALEGAH+L+TG+L  LSEQQ+VDCDH CD  E 
Sbjct: 142 DWRDHGAVTPVKNQGSCGSCWSFSTSGALEGAHYLATGKLEVLSEQQMVDCDHVCDTSEP 201

Query: 202 GSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISS 261
            SCDSGCNGGLM +AF Y+ KAGG+E EKDYPYTG+D   CKFDKSKI A+V NFSV+S 
Sbjct: 202 DSCDSGCNGGLMTNAFSYLQKAGGLESEKDYPYTGSDD-KCKFDKSKIVASVQNFSVVSV 260

Query: 262 DEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRF 321
           DE Q+AANL+KHGPLA+GINA +MQTYIGGVSCPYICG+ LDHGVL+VGYG++GFAPIR 
Sbjct: 261 DEGQIAANLIKHGPLAIGINAAYMQTYIGGVSCPYICGRTLDHGVLLVGYGAAGFAPIRL 320

Query: 322 KEKPYWIIKNSWGENWGENGYYKICMG---RNVCGVDSMVSSVAAIHTT 367
           K+KPYWIIKNSWGENWGENGYYKIC G   RN CGVDSMVS+V+A+ T+
Sbjct: 321 KDKPYWIIKNSWGENWGENGYYKICRGSNVRNKCGVDSMVSTVSAVRTS 369


>gi|41019551|tpe|CAD66657.1| TPA: putative cysteine proteinase precursor [Hordeum vulgare subsp.
           vulgare]
 gi|326489967|dbj|BAJ94057.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326525847|dbj|BAJ93100.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 377

 Score =  507 bits (1305), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 241/360 (66%), Positives = 288/360 (80%), Gaps = 11/360 (3%)

Query: 16  SVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFR 75
           S   +  A  D++ +IRQVV   G    D+ L  +  F  F  +F KTY   EEH +R  
Sbjct: 18  SPAPATAAAGDEEPLIRQVV--GGADPLDNDLELDSQFVGFVQRFGKTYRDAEEHAHRLS 75

Query: 76  VFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLR-----LPADAQKAP 130
           VFKANLRRA+R QLLDP+A HGVTKFSDLTP+EFRR +LGL    R     +   A  AP
Sbjct: 76  VFKANLRRARRHQLLDPSAEHGVTKFSDLTPAEFRRTYLGLKTTRRSFLREMAGSAHDAP 135

Query: 131 ILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLV 190
           +LPT+ LP DFDWRDHGAV  VK+QG+CGSCWSFSA+GALEGA++L++G++  LSEQQLV
Sbjct: 136 VLPTDGLPEDFDWRDHGAVGPVKNQGSCGSCWSFSASGALEGANYLASGKMEVLSEQQLV 195

Query: 191 DCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIA 250
           DCDHECDP E  SCD+GCNGGLM SAF Y+LK+GG+EREKDYPYTG DG +CKFDKSKIA
Sbjct: 196 DCDHECDPSEPDSCDAGCNGGLMTSAFSYLLKSGGLEREKDYPYTGKDG-TCKFDKSKIA 254

Query: 251 AAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVG 310
           A+V N+SV++ DE+Q+AANLVK+GPLA+GINA +MQTYIGGVSCPYICG++LDHGVL+VG
Sbjct: 255 ASVQNYSVVAVDEEQIAANLVKYGPLAIGINAAYMQTYIGGVSCPYICGRHLDHGVLLVG 314

Query: 311 YGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMG---RNVCGVDSMVSSVAAIHTT 367
           YG+SGFAP RFKEKPYWIIKNSWGENWG+ GYYKIC G   RN CGVDSMVS+V+A H++
Sbjct: 315 YGASGFAPSRFKEKPYWIIKNSWGENWGDKGYYKICRGSNVRNKCGVDSMVSTVSATHSS 374


>gi|1619903|gb|AAB16996.1| thiol protease isoform B, partial [Glycine max]
          Length = 319

 Score =  503 bits (1296), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 240/315 (76%), Positives = 275/315 (87%), Gaps = 4/315 (1%)

Query: 55  LFKSKF-SKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQF 113
           L + KF  + YAT+EEHD+RF VFK+NLRRA       P  VHGVTKFSDLTP+EFRRQF
Sbjct: 7   LSRPKFRPRPYATKEEHDHRFGVFKSNLRRASCTPSSTPR-VHGVTKFSDLTPAEFRRQF 65

Query: 114 LGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGA 173
           LGL + +R PA AQKAPILPT DLP DFDWRD GAVT VKDQG CGSCWSFS TGALEGA
Sbjct: 66  LGL-KAVRFPAHAQKAPILPTKDLPKDFDWRDKGAVTNVKDQGGCGSCWSFSTTGALEGA 124

Query: 174 HFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYP 233
           ++L+TGELVSLSEQQLVDCDH CDPEE G+CDSGCNGGLMN+AFEYIL++GGV++EKDYP
Sbjct: 125 YYLATGELVSLSEQQLVDCDHVCDPEEYGACDSGCNGGLMNNAFEYILQSGGVQKEKDYP 184

Query: 234 YTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVS 293
           YTG DG +CKFDK+K+AA VSN+SV+  DE+Q+AANLVK+GPLAV INAV+MQTY+GGVS
Sbjct: 185 YTGRDG-TCKFDKTKVAATVSNYSVVCLDEEQIAANLVKNGPLAVAINAVFMQTYVGGVS 243

Query: 294 CPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCG 353
           CPYICGK+LDHGVL+VGYG   +APIRFK KPYWIIKNSWGE+WGENGY +IC GRNVCG
Sbjct: 244 CPYICGKHLDHGVLLVGYGEGAYAPIRFKNKPYWIIKNSWGESWGENGYDEICRGRNVCG 303

Query: 354 VDSMVSSVAAIHTTS 368
           VDSMVS+VAAI+ +S
Sbjct: 304 VDSMVSTVAAIYPSS 318


>gi|38344381|emb|CAD40319.2| OSJNBb0054B09.3 [Oryza sativa Japonica Group]
 gi|116309071|emb|CAH66180.1| OSIGBa0130O15.4 [Oryza sativa Indica Group]
 gi|116309098|emb|CAH66205.1| OSIGBa0148D14.11 [Oryza sativa Indica Group]
          Length = 381

 Score =  500 bits (1287), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 238/348 (68%), Positives = 280/348 (80%), Gaps = 9/348 (2%)

Query: 26  DDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAK 85
           ++D +I QVV   G + ED  L+AE HF+ F+ +F +TY    E  YR  VF ANLRRA+
Sbjct: 33  EEDPLIEQVV--GGGEEEDAQLDAEAHFASFERRFGRTYRDAGERAYRMSVFAANLRRAR 90

Query: 86  RRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNR---RLRLPADAQKAPILPTNDLPTDFD 142
           R Q LDPTA HGVTKFSDLTP EFR +FLGL R      +  +  +APILPT+ LP DFD
Sbjct: 91  RHQRLDPTATHGVTKFSDLTPGEFRDRFLGLRRPSLEGLVGGEPHEAPILPTDGLPDDFD 150

Query: 143 WRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESG 202
           WR+HGAV  VKDQG+CGSCWSFS +GALEGAHFL+TG+L  LSEQQ+VDCDHECD  ES 
Sbjct: 151 WREHGAVGPVKDQGSCGSCWSFSTSGALEGAHFLATGKLEVLSEQQMVDCDHECDASESR 210

Query: 203 SCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSD 262
           +CDSGCNGGLM +AF Y++K+GG++ EKDYPY G +  +CKFDKSKI A V NFSVIS +
Sbjct: 211 ACDSGCNGGLMTTAFSYLMKSGGLQSEKDYPYAGREN-TCKFDKSKIVAQVKNFSVISVN 269

Query: 263 EDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFK 322
           EDQ+AANLVKHGPLA+ INA +MQTYIGGVSCP+ICG++LDHGVL+VGYGS+G+APIRFK
Sbjct: 270 EDQIAANLVKHGPLAIAINAAYMQTYIGGVSCPFICGRHLDHGVLLVGYGSAGYAPIRFK 329

Query: 323 EKPYWIIKNSWGENWGENGYYKICMG---RNVCGVDSMVSSVAAIHTT 367
           EKPYWIIKNSWGENWGE GYYKIC G   +N CGVDSMVSSV AIHT+
Sbjct: 330 EKPYWIIKNSWGENWGEKGYYKICRGPHDKNKCGVDSMVSSVTAIHTS 377


>gi|194352746|emb|CAQ00101.1| papain-like cysteine proteinase [Hordeum vulgare subsp. vulgare]
          Length = 381

 Score =  499 bits (1286), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 236/349 (67%), Positives = 283/349 (81%), Gaps = 12/349 (3%)

Query: 27  DDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKR 86
           +D +I QVV  D E   +  LNAE HF+ F  +F K+Y   +EH++R  VF+ANLRRA+R
Sbjct: 34  EDPLIEQVVGGDAENELE--LNAEAHFASFVRRFGKSYRDADEHEHRLSVFRANLRRARR 91

Query: 87  RQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLR-----LPADAQKAPILPTNDLPTDF 141
            Q LDP+AVHG+TKFSDLTP EFR +FLGL +  R     +   A  AP LPT+ LPT+F
Sbjct: 92  HQRLDPSAVHGITKFSDLTPDEFRERFLGLRKSRRSFLKGISGSAHDAPALPTDGLPTEF 151

Query: 142 DWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEES 201
           DWR+HGAV  VKDQG+CGSCWSFS +GALEGA++L+TG+L  LSEQQLVDCDHECDP E 
Sbjct: 152 DWREHGAVGPVKDQGSCGSCWSFSTSGALEGANYLATGKLEVLSEQQLVDCDHECDPSEP 211

Query: 202 GSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISS 261
            +CD+GCNGGLM +AF Y+ KAGG+E EKDYPYTG +  +CKFDKSKIAA V NFS ++ 
Sbjct: 212 RACDAGCNGGLMTTAFSYLAKAGGLETEKDYPYTGRN-SACKFDKSKIAAQVKNFSTVAI 270

Query: 262 DEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRF 321
           DEDQ+AANLVKHGPLA+GINAV+MQTYIGGVSCPYICG++LDH V +VGYGS+G+AP+RF
Sbjct: 271 DEDQIAANLVKHGPLAIGINAVFMQTYIGGVSCPYICGRHLDH-VFLVGYGSAGYAPLRF 329

Query: 322 KEKPYWIIKNSWGENWGENGYYKICMG---RNVCGVDSMVSSVAAIHTT 367
           KEKPYWIIKNSWGENWGE+GYYKIC G   +N CGVDSMVS+V AIHT+
Sbjct: 330 KEKPYWIIKNSWGENWGESGYYKICRGPHVKNKCGVDSMVSTVTAIHTS 378


>gi|56682917|gb|AAW21813.1| cysteine protease [Triticum aestivum]
          Length = 377

 Score =  497 bits (1280), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 237/350 (67%), Positives = 282/350 (80%), Gaps = 11/350 (3%)

Query: 26  DDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAK 85
           D++ +IRQVV   G    D+ L  +     F  +F KTY   EEH +R  VFKANLRRA+
Sbjct: 28  DEEPLIRQVV--GGADPLDNDLELDSQLLGFVQRFGKTYRDAEEHAHRLSVFKANLRRAR 85

Query: 86  RRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLR-----LPADAQKAPILPTNDLPTD 140
           R Q+LDP+A HGVTKFSDLTP+EFRR FLGL    R     +   A  AP+LPT+ LP D
Sbjct: 86  RHQMLDPSAEHGVTKFSDLTPAEFRRTFLGLKTTRRSFLREMAGSAHDAPVLPTDGLPED 145

Query: 141 FDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEE 200
           FDWRDHGAV  VK+QG+C SCWSFSA+GALEGA++L+TG++  LSEQQLVDCDHECDP E
Sbjct: 146 FDWRDHGAVGPVKNQGSCWSCWSFSASGALEGANYLATGKMEVLSEQQLVDCDHECDPAE 205

Query: 201 SGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVIS 260
             SCD+GCNGGLM SAF Y+LK+GG+EREKDYPYTG DG +CKF+KSKIAA+V NFSV++
Sbjct: 206 PDSCDAGCNGGLMTSAFSYLLKSGGLEREKDYPYTGKDG-TCKFEKSKIAASVQNFSVVA 264

Query: 261 SDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIR 320
            DE+Q+AANLV++GPLA+GINA +MQTYIGGVSCPYICG++LDHGVL+VGYG+SGFAP R
Sbjct: 265 VDEEQIAANLVEYGPLAIGINAAYMQTYIGGVSCPYICGRHLDHGVLLVGYGASGFAPSR 324

Query: 321 FKEKPYWIIKNSWGENWGENGYYKICMG---RNVCGVDSMVSSVAAIHTT 367
           FKEKPYWIIKNSWGENWG+ GYYKIC G   RN CGVDSMVS+V+A H +
Sbjct: 325 FKEKPYWIIKNSWGENWGDKGYYKICRGSNVRNKCGVDSMVSTVSATHAS 374


>gi|116787909|gb|ABK24688.1| unknown [Picea sitchensis]
 gi|224284108|gb|ACN39791.1| unknown [Picea sitchensis]
 gi|224285024|gb|ACN40241.1| unknown [Picea sitchensis]
          Length = 366

 Score =  486 bits (1252), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 241/368 (65%), Positives = 288/368 (78%), Gaps = 15/368 (4%)

Query: 7   SSLLL--LLLSSVLASAVAVNDDDAMIRQV---VPSDGE--QSEDHLLNAEHHFSLFKSK 59
           S+LL     + SV+  + A   DD +IRQV   V SD +   +   L NAE HF  F  +
Sbjct: 4   STLLFSAFCIFSVIFLSSATKPDDDLIRQVTDEVVSDPQILDARSALFNAEVHFRHFIRR 63

Query: 60  FSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRR 119
           + K Y+  EEH++RF VFK+NL RA   Q LDP A HGVTKFSDLT  EFR Q+LGL   
Sbjct: 64  YGKKYSGPEEHEHRFGVFKSNLLRALEHQKLDPRASHGVTKFSDLTQEEFRHQYLGL--- 120

Query: 120 LRLPA--DAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLS 177
            R P   DA  APILPTNDLP DFDWR+ GAVT VK+QG+CGSCW+FS TGALEGA+FL 
Sbjct: 121 -RAPPLRDAHDAPILPTNDLPEDFDWREKGAVTEVKNQGSCGSCWAFSTTGALEGANFLK 179

Query: 178 TGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGT 237
           TGELVSLSEQQLVDCDHECDP ++ SCDSGCNGGLM SA++Y LK+GG+E+E+DYPYTG 
Sbjct: 180 TGELVSLSEQQLVDCDHECDPSDARSCDSGCNGGLMTSAYQYALKSGGLEKEEDYPYTGK 239

Query: 238 DGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYI 297
           D G+C F+K+KI A VSNFSV+S DE Q+AANLVK+GPL+VGINA +MQTY+GGVSCPY+
Sbjct: 240 D-GTCSFNKNKIVAHVSNFSVVSIDEGQIAANLVKNGPLSVGINAAFMQTYVGGVSCPYV 298

Query: 298 CGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDS 356
           C K  LDHGVL+VGYG++ FAPIR K+KPYW+IKNSWG NWGENGYYK+C G NVCG+++
Sbjct: 299 CSKRNLDHGVLLVGYGAAAFAPIRMKDKPYWVIKNSWGPNWGENGYYKLCRGHNVCGINN 358

Query: 357 MVSSVAAI 364
           MVS+VAAI
Sbjct: 359 MVSTVAAI 366


>gi|116779325|gb|ABK21238.1| unknown [Picea sitchensis]
 gi|148905850|gb|ABR16087.1| unknown [Picea sitchensis]
 gi|148908434|gb|ABR17330.1| unknown [Picea sitchensis]
 gi|148908881|gb|ABR17545.1| unknown [Picea sitchensis]
 gi|224286109|gb|ACN40765.1| unknown [Picea sitchensis]
          Length = 366

 Score =  486 bits (1251), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 241/368 (65%), Positives = 288/368 (78%), Gaps = 15/368 (4%)

Query: 7   SSLLL--LLLSSVLASAVAVNDDDAMIRQV---VPSDGE--QSEDHLLNAEHHFSLFKSK 59
           S+LL     + SV+  + A   DD +IRQV   V SD +   +   L NAE HF  F  +
Sbjct: 4   STLLFSAFCIFSVIFLSSATRPDDDLIRQVTDEVVSDPQILDARSALFNAEVHFRHFIRR 63

Query: 60  FSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRR 119
           + K Y+  EEH++RF VFK+NL RA   Q LDP A HGVTKFSDLT  EFR Q+LGL   
Sbjct: 64  YGKKYSGPEEHEHRFGVFKSNLLRALEHQKLDPRASHGVTKFSDLTQEEFRHQYLGL--- 120

Query: 120 LRLPA--DAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLS 177
            R P   DA  APILPTNDLP DFDWR+ GAVT VK+QG+CGSCW+FS TGALEGA+FL 
Sbjct: 121 -RAPPLRDAHDAPILPTNDLPEDFDWREKGAVTEVKNQGSCGSCWAFSTTGALEGANFLK 179

Query: 178 TGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGT 237
           TGELVSLSEQQLVDCDHECDP ++ SCDSGCNGGLM SA++Y LK+GG+E+E+DYPYTG 
Sbjct: 180 TGELVSLSEQQLVDCDHECDPSDARSCDSGCNGGLMTSAYQYALKSGGLEKEEDYPYTGK 239

Query: 238 DGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYI 297
           D G+C F+K+KI A VSNFSV+S DE Q+AANLVK+GPL+VGINA +MQTY+GGVSCPY+
Sbjct: 240 D-GTCSFNKNKIVAHVSNFSVVSIDEGQIAANLVKNGPLSVGINAAFMQTYVGGVSCPYV 298

Query: 298 CGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDS 356
           C K  LDHGVL+VGYG++ FAPIR K+KPYW+IKNSWG NWGENGYYK+C G NVCG+++
Sbjct: 299 CSKRNLDHGVLLVGYGAAAFAPIRMKDKPYWVIKNSWGPNWGENGYYKLCRGHNVCGINN 358

Query: 357 MVSSVAAI 364
           MVS+VAAI
Sbjct: 359 MVSTVAAI 366


>gi|40806502|gb|AAR92156.1| putative cysteine protease 3 [Iris x hollandica]
          Length = 292

 Score =  486 bits (1251), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 221/289 (76%), Positives = 256/289 (88%), Gaps = 1/289 (0%)

Query: 81  LRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNR-RLRLPADAQKAPILPTNDLPT 139
           +RRA+R Q LDPTAVHGVT+FSDLTP EF+R +LGL + +  L   A +AP+LPTNDLP 
Sbjct: 1   MRRARRHQQLDPTAVHGVTQFSDLTPGEFKRTYLGLRKGKKHLVGSAHEAPLLPTNDLPE 60

Query: 140 DFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPE 199
           DFDWRD GAVTGVK+QG+CGSCWSFS +GALEGA+FL+TG+L +LSEQQ+VDCDHECD E
Sbjct: 61  DFDWRDKGAVTGVKNQGSCGSCWSFSTSGALEGANFLATGKLETLSEQQMVDCDHECDAE 120

Query: 200 ESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVI 259
           E   CD GCNGGLMN+AF+Y+ K GG+E EKDYPYTGTD G+CKFD+SKI A+V NFSV+
Sbjct: 121 EPDDCDQGCNGGLMNTAFQYLQKVGGLESEKDYPYTGTDRGTCKFDESKIKASVHNFSVV 180

Query: 260 SSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPI 319
           S DE+Q+AANLVKHGPLA+ INAV+MQTYIGGVSCPYICGK+LDHGVL+VGYGS+G+API
Sbjct: 181 SIDEEQIAANLVKHGPLAIAINAVFMQTYIGGVSCPYICGKHLDHGVLLVGYGSAGYAPI 240

Query: 320 RFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIHTTS 368
           R KEKPYWIIKNSWGE WGENGYYKIC GRNVCGVDSMVS+V AIHTT+
Sbjct: 241 RLKEKPYWIIKNSWGETWGENGYYKICRGRNVCGVDSMVSTVTAIHTTA 289


>gi|224285931|gb|ACN40679.1| unknown [Picea sitchensis]
          Length = 366

 Score =  483 bits (1244), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 240/368 (65%), Positives = 287/368 (77%), Gaps = 15/368 (4%)

Query: 7   SSLLL--LLLSSVLASAVAVNDDDAMIRQV---VPSDGE--QSEDHLLNAEHHFSLFKSK 59
           S+LL     + SV+  + A   DD +IRQV   V SD +   +   L NAE HF  F  +
Sbjct: 4   STLLFSAFCIFSVIFLSSATRPDDDLIRQVTDEVVSDPQILDARSALFNAEVHFRHFIRR 63

Query: 60  FSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRR 119
           + K Y+  EEH++RF VFK+NL RA   Q LDP A HGVTKFSDLT   FR Q+LGL   
Sbjct: 64  YGKKYSGPEEHEHRFGVFKSNLLRALEHQKLDPRASHGVTKFSDLTQEGFRHQYLGL--- 120

Query: 120 LRLPA--DAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLS 177
            R P   DA  APILPTNDLP DFDWR+ GAVT VK+QG+CGSCW+FS TGALEGA+FL 
Sbjct: 121 -RAPPLRDAHDAPILPTNDLPEDFDWREKGAVTEVKNQGSCGSCWAFSTTGALEGANFLK 179

Query: 178 TGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGT 237
           TGELVSLSEQQLVDCDHECDP ++ SCDSGCNGGLM SA++Y LK+GG+E+E+DYPYTG 
Sbjct: 180 TGELVSLSEQQLVDCDHECDPSDARSCDSGCNGGLMTSAYQYALKSGGLEKEEDYPYTGK 239

Query: 238 DGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYI 297
           D G+C F+K+KI A VSNFSV+S DE Q+AANLVK+GPL+VGINA +MQTY+GGVSCPY+
Sbjct: 240 D-GTCSFNKNKIVAHVSNFSVVSIDEGQIAANLVKNGPLSVGINAAFMQTYVGGVSCPYV 298

Query: 298 CGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDS 356
           C K  LDHGVL+VGYG++ FAPIR K+KPYW+IKNSWG NWGENGYYK+C G NVCG+++
Sbjct: 299 CSKRNLDHGVLLVGYGAAAFAPIRMKDKPYWVIKNSWGPNWGENGYYKLCRGHNVCGINN 358

Query: 357 MVSSVAAI 364
           MVS+VAAI
Sbjct: 359 MVSTVAAI 366


>gi|302771610|ref|XP_002969223.1| hypothetical protein SELMODRAFT_91274 [Selaginella moellendorffii]
 gi|300162699|gb|EFJ29311.1| hypothetical protein SELMODRAFT_91274 [Selaginella moellendorffii]
          Length = 367

 Score =  479 bits (1232), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 220/342 (64%), Positives = 273/342 (79%), Gaps = 8/342 (2%)

Query: 28  DAMIRQVVPSDGEQSEDHL------LNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANL 81
           D+ IR+V  +  ++S   L      L+ E HF  F ++F K YAT E + +R +VF+ANL
Sbjct: 27  DSGIREVTDTARDESNGRLDAAKALLDVETHFKSFIARFGKAYATAEAYAHRLKVFEANL 86

Query: 82  RRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDF 141
            RA   Q LDP+AVHG+T+FSDLT  EF++QFLGL    RL  +A KAP+LPTNDLP DF
Sbjct: 87  VRAVSHQALDPSAVHGITQFSDLTEEEFKQQFLGLRVPSRL-REANKAPVLPTNDLPEDF 145

Query: 142 DWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEES 201
           DWR+HGAVT VK+QGACGSCW+FS TGA+EGAHFL TG+L+SLSEQQLVDCDH CDP + 
Sbjct: 146 DWREHGAVTEVKNQGACGSCWAFSTTGAIEGAHFLETGKLISLSEQQLVDCDHSCDPTDK 205

Query: 202 GSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISS 261
            SCD+GCNGGLM +A++Y++K+GG+E E DYPYTG   G C+F+ +KI A+V+NFS +S 
Sbjct: 206 VSCDAGCNGGLMTNAYDYVMKSGGLETETDYPYTGNSNGKCQFNANKIVASVANFSTVSL 265

Query: 262 DEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGK-YLDHGVLIVGYGSSGFAPIR 320
           DEDQ+AANLVKHGPLA+GINAV+MQTYIGGVSCP IC K ++DHGVL+VGYG+ G+APIR
Sbjct: 266 DEDQIAANLVKHGPLAIGINAVFMQTYIGGVSCPIICSKHHIDHGVLLVGYGAKGYAPIR 325

Query: 321 FKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVA 362
           F EKPYWIIKNSWG  WGE GYYKIC G  +CG+++MVS+VA
Sbjct: 326 FTEKPYWIIKNSWGATWGEQGYYKICRGHGMCGMNTMVSTVA 367


>gi|302754322|ref|XP_002960585.1| hypothetical protein SELMODRAFT_266583 [Selaginella moellendorffii]
 gi|300171524|gb|EFJ38124.1| hypothetical protein SELMODRAFT_266583 [Selaginella moellendorffii]
          Length = 330

 Score =  476 bits (1226), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 218/329 (66%), Positives = 269/329 (81%), Gaps = 4/329 (1%)

Query: 35  VPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTA 94
           V  +G++S   LL+ E HF  F ++F K YAT E + +R +VF+ANL RA   Q LDP+A
Sbjct: 5   VVDNGDRSA--LLDVETHFKSFIARFGKAYATAEAYAHRLKVFEANLVRAVSHQALDPSA 62

Query: 95  VHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKD 154
           VHG+T+FSDLT  EF++QFLGL    RL  +A KAP+LPTNDLP DFDWR+HGAVT VK+
Sbjct: 63  VHGITQFSDLTEEEFKQQFLGLRVPSRL-REANKAPVLPTNDLPEDFDWREHGAVTEVKN 121

Query: 155 QGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMN 214
           QGACGSCW+FS TGA+EGAHFL TG+L+SLSEQQLVDCDH CDP +  SCD+GCNGGLM 
Sbjct: 122 QGACGSCWAFSTTGAIEGAHFLETGKLISLSEQQLVDCDHSCDPTDKVSCDAGCNGGLMT 181

Query: 215 SAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHG 274
           +A++Y++K+GG+E E DYPYTG   G C+F+ +KI A+V+NFS +S DEDQ+AANLVKHG
Sbjct: 182 NAYDYVMKSGGLETETDYPYTGNSNGKCQFNANKIVASVANFSTVSLDEDQIAANLVKHG 241

Query: 275 PLAVGINAVWMQTYIGGVSCPYICGK-YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSW 333
           PLA+GINAV+MQTYIGGVSCP IC K ++DHGVL+VGYG+ G+APIRF EKPYWIIKNSW
Sbjct: 242 PLAIGINAVFMQTYIGGVSCPIICSKHHIDHGVLLVGYGAKGYAPIRFTEKPYWIIKNSW 301

Query: 334 GENWGENGYYKICMGRNVCGVDSMVSSVA 362
           G  WGE GYYKIC G  +CG+++MVS+VA
Sbjct: 302 GATWGEQGYYKICRGHGMCGMNTMVSTVA 330


>gi|116786550|gb|ABK24153.1| unknown [Picea sitchensis]
          Length = 394

 Score =  476 bits (1225), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 233/370 (62%), Positives = 284/370 (76%), Gaps = 12/370 (3%)

Query: 5   ILSSLLLLLLSSVLASA-VAVNDDDAM----IRQVVPSDGEQSEDHL----LNAEHHFSL 55
           ILS  LL L+ ++ A    A +D +A+    IR+V   DGE   D L    LNAE HF+ 
Sbjct: 18  ILSLALLFLVPTITAHVHEASSDLNAVLPNPIREVTDMDGEGVIDDLRRGLLNAEAHFAH 77

Query: 56  FKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLG 115
           F  KF+K Y+  EEH  RF +FK NL +A R Q LD  A+HG+ KFSDLT  EF  Q+LG
Sbjct: 78  FVKKFNKEYSGAEEHARRFSIFKKNLHKALRHQKLDRDAIHGINKFSDLTEEEFHEQYLG 137

Query: 116 LNRRLR-LPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAH 174
           L    R L    Q APILPT+DLP DFDWR+ GAVT VK+QGACGSCW+FS TGA+EGA+
Sbjct: 138 LTTPPRSLSQRTQPAPILPTDDLPPDFDWRELGAVTPVKNQGACGSCWTFSTTGAMEGAN 197

Query: 175 FLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPY 234
           F+ TG+L+SLSEQQLVDCDHECD  E   CDSGCNGGLM +A++Y LKAGG++RE+DYPY
Sbjct: 198 FMKTGKLISLSEQQLVDCDHECDSSEPDVCDSGCNGGLMTTAYQYALKAGGLQREEDYPY 257

Query: 235 TGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSC 294
           TG D GSCKFD +K+AA V+NFS +S DEDQ+AANLVK+GPLAVGINA +MQTY+GGVSC
Sbjct: 258 TGID-GSCKFDNTKVAAMVANFSTVSIDEDQIAANLVKNGPLAVGINAAFMQTYVGGVSC 316

Query: 295 PYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCG 353
           PY+C K  LDHGVL+VGYG++G+AP R K KP+WIIKNSWG +WGE+GYYK+C G NVCG
Sbjct: 317 PYVCNKQNLDHGVLLVGYGAAGYAPGRLKNKPFWIIKNSWGPDWGEDGYYKLCRGHNVCG 376

Query: 354 VDSMVSSVAA 363
           +++MVS+VAA
Sbjct: 377 INTMVSTVAA 386


>gi|222628593|gb|EEE60725.1| hypothetical protein OsJ_14236 [Oryza sativa Japonica Group]
          Length = 364

 Score =  467 bits (1202), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 229/348 (65%), Positives = 271/348 (77%), Gaps = 26/348 (7%)

Query: 26  DDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAK 85
           ++D +I QVV   G + ED  L+AE HF+ F+ +F +TY                 RRA+
Sbjct: 33  EEDPLIDQVV--GGGEEEDAQLDAEAHFASFERRFGRTYP--------------GPRRAR 76

Query: 86  RRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNR---RLRLPADAQKAPILPTNDLPTDFD 142
           R   LDPTA HGVTKFSDLTP EFR +FLGL R      +  +  +APILPT+ LP DFD
Sbjct: 77  R---LDPTATHGVTKFSDLTPGEFRDRFLGLRRPSLEGLVGGEPHEAPILPTDGLPDDFD 133

Query: 143 WRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESG 202
           WR+HGAV  VKDQG+CGSCWSFS +GALEGAHFL+TG+L  LSEQQ+VDCDHECD  ES 
Sbjct: 134 WREHGAVGPVKDQGSCGSCWSFSTSGALEGAHFLATGKLEVLSEQQMVDCDHECDASESR 193

Query: 203 SCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSD 262
           +CDSGCNGGLM +AF Y++K+GG++ EKDYPY G +  +CKFDKSKI A V NFSVIS +
Sbjct: 194 ACDSGCNGGLMTTAFSYLMKSGGLQSEKDYPYAGREN-TCKFDKSKIVAQVKNFSVISVN 252

Query: 263 EDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFK 322
           EDQ+AANLVKHGPLA+ INA +MQTYIGGVSCP+ICG++LDHGVL+VGYGS+G+APIRFK
Sbjct: 253 EDQIAANLVKHGPLAIAINAAYMQTYIGGVSCPFICGRHLDHGVLLVGYGSAGYAPIRFK 312

Query: 323 EKPYWIIKNSWGENWGENGYYKICMG---RNVCGVDSMVSSVAAIHTT 367
           EKPYWIIKNSWGENWGE GYYKIC G   +N CGVDSMVSSV AIHT+
Sbjct: 313 EKPYWIIKNSWGENWGEKGYYKICRGPHDKNKCGVDSMVSSVTAIHTS 360


>gi|125547724|gb|EAY93546.1| hypothetical protein OsI_15336 [Oryza sativa Indica Group]
          Length = 348

 Score =  443 bits (1139), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 209/291 (71%), Positives = 241/291 (82%), Gaps = 7/291 (2%)

Query: 83  RAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNR---RLRLPADAQKAPILPTNDLPT 139
           R  R   LDPTA HGVTKFSDLTP EFR + LGL R      +  +  +APILPT+ LP 
Sbjct: 55  RELRAARLDPTATHGVTKFSDLTPGEFRDRLLGLRRPSLEGLVGGEPHEAPILPTDGLPD 114

Query: 140 DFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPE 199
           DFDWR+HGAV  VKDQG+CGSCWSFS +GALEGAHFL+TG+L  LSEQQ+VDCDHECD  
Sbjct: 115 DFDWREHGAVGPVKDQGSCGSCWSFSTSGALEGAHFLATGKLEVLSEQQMVDCDHECDAS 174

Query: 200 ESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVI 259
           ES +CDSGCNGGLM +AF Y++K+GG++ EKDYPY G +  +CKFDKSKI A V NFSVI
Sbjct: 175 ESRACDSGCNGGLMTTAFSYLMKSGGLQSEKDYPYAGREN-TCKFDKSKIVAQVKNFSVI 233

Query: 260 SSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPI 319
           S +EDQ+AANLVKHGPLA+ INA +MQTYIGGVSCP+ICG++LDHGVL+VGYGS+G+API
Sbjct: 234 SVNEDQIAANLVKHGPLAIAINAAYMQTYIGGVSCPFICGRHLDHGVLLVGYGSAGYAPI 293

Query: 320 RFKEKPYWIIKNSWGENWGENGYYKICMG---RNVCGVDSMVSSVAAIHTT 367
           RFKEKPYWIIKNSWGENWGE GYYKIC G   +N CGVDSMVSSV AIHT+
Sbjct: 294 RFKEKPYWIIKNSWGENWGEKGYYKICRGPHDKNKCGVDSMVSSVTAIHTS 344


>gi|168018894|ref|XP_001761980.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162686697|gb|EDQ73084.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 369

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 211/366 (57%), Positives = 260/366 (71%), Gaps = 12/366 (3%)

Query: 4   LILSSLLLLLLSSVLAS-----AVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKS 58
           L+L  +++L  +   AS      +    DDA+    V    EQ    L+ AE  F  F  
Sbjct: 6   LLLVGIVVLGFAGFAASLPTGDTIREVTDDALSNGSV----EQFAHALIGAEKRFESFMK 61

Query: 59  KFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNR 118
            F K Y + EE+++RF VFK+NL +A + Q LDPTA HGVT FSDLT  EF  ++LGL R
Sbjct: 62  DFGKVYHSVEEYEHRFGVFKSNLLKALKHQALDPTASHGVTMFSDLTEEEFTSKYLGLKR 121

Query: 119 RLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLST 178
              L + A +AP LPT DLP +FDWR+ GAV  VKDQG CGSCW+FS TGA+EGAHFL++
Sbjct: 122 PSVL-SSAPQAPPLPTEDLPPNFDWREKGAVGPVKDQGGCGSCWAFSTTGAVEGAHFLNS 180

Query: 179 GELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTD 238
           G+LVSLSEQQLVDCDH+CD EE+ +CD+GCNGG M +A++Y+  AGG+E E DYPY G D
Sbjct: 181 GKLVSLSEQQLVDCDHQCDREEADACDAGCNGGFMTNAYQYVEAAGGLELESDYPYEGRD 240

Query: 239 GGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYIC 298
            G CKFD +K+A  VSNF+ I  DEDQ+AA L+K GPLA+GINA +MQTYI GVSCP  C
Sbjct: 241 -GKCKFDSNKVAVKVSNFTNIPVDEDQVAAYLIKSGPLAIGINAEFMQTYIAGVSCPIFC 299

Query: 299 GKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSM 357
            K  LDHGVL+VGY   GFAP R   KPYWIIKNSWG NWG+NGYYKIC G   CG+++M
Sbjct: 300 NKRNLDHGVLLVGYAERGFAPARLAYKPYWIIKNSWGPNWGDNGYYKICRGHGECGLNTM 359

Query: 358 VSSVAA 363
           VS+V+A
Sbjct: 360 VSAVSA 365


>gi|168059933|ref|XP_001781954.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162666600|gb|EDQ53250.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 369

 Score =  423 bits (1087), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 207/349 (59%), Positives = 255/349 (73%), Gaps = 5/349 (1%)

Query: 18  LASAVAVNDDDAMIRQVVPSDG--EQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFR 75
           L +++ + D    +   V  DG  EQ    LL AE  F  F  +F K Y T EE+++RF+
Sbjct: 19  LVASLPLRDVIQQVTDGVRVDGSVEQFAHALLGAEKQFESFIKEFGKVYHTVEEYEHRFK 78

Query: 76  VFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTN 135
           VFK+NL RA + Q LDPTA HGVT FSDLT  EF  Q+LGL R   L + A  A  LPT 
Sbjct: 79  VFKSNLLRALKHQALDPTASHGVTMFSDLTEEEFATQYLGLKRPSAL-STAPTAEPLPTG 137

Query: 136 DLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHE 195
           DLP  FDWR+ GAV  VK+QG+CGSCW+FS TGA+EGAHFL+TG+L+SLSEQQLVDCDH+
Sbjct: 138 DLPPSFDWREKGAVGPVKNQGSCGSCWAFSTTGAVEGAHFLATGKLLSLSEQQLVDCDHQ 197

Query: 196 CDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSN 255
           CDPEE+ +CD+GC GGLM +A++Y+ +AGG+E E DYPY G D G C+F+ +K+AA VSN
Sbjct: 198 CDPEEAQACDAGCGGGLMTNAYKYVEEAGGLELESDYPYKGRD-GKCQFNPNKVAAKVSN 256

Query: 256 FSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKY-LDHGVLIVGYGSS 314
           F+ I  DEDQ+AA L+K GPLA+GINA +MQTY+ GVSCP  C K  LDHGVL+VGY   
Sbjct: 257 FTNIPIDEDQVAAYLIKSGPLAIGINAEFMQTYVAGVSCPIFCNKRNLDHGVLLVGYAEH 316

Query: 315 GFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAA 363
           GFAP R   KPYWIIKNSWG  WG+ GYYKIC G   CG+++MVS+VAA
Sbjct: 317 GFAPARLAYKPYWIIKNSWGPMWGDKGYYKICRGHGECGLNTMVSAVAA 365


>gi|240255643|ref|NP_567010.5| Papain family cysteine protease [Arabidopsis thaliana]
 gi|17979125|gb|AAL49820.1| putative cysteine proteinase [Arabidopsis thaliana]
 gi|332645795|gb|AEE79316.1| Papain family cysteine protease [Arabidopsis thaliana]
          Length = 367

 Score =  423 bits (1087), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 200/364 (54%), Positives = 266/364 (73%), Gaps = 7/364 (1%)

Query: 4   LILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLL--NAEHHFSLFKSKFS 61
           ++  +L  L+   +L   V  + +D  IRQV  +D  +   +LL  + E  F LF S + 
Sbjct: 1   MVAKALAQLITCIILFCHVVASVEDLTIRQVT-ADNRRIRPNLLGTHTESKFRLFMSDYG 59

Query: 62  KTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRR-- 119
           K Y+T+EE+ +R  +F  N+ +A   Q++DP+AVHGVT+FSDLT  EF+R + G+     
Sbjct: 60  KNYSTREEYIHRLGIFAKNVLKAAEHQMMDPSAVHGVTQFSDLTEEEFKRMYTGVADVGG 119

Query: 120 LRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTG 179
            R      +AP++  + LP DFDWR+ G VT VK+QGACGSCW+FS TGA EGAHF+STG
Sbjct: 120 SRGGTVGAEAPMVEVDGLPEDFDWREKGGVTEVKNQGACGSCWAFSTTGAAEGAHFVSTG 179

Query: 180 ELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDG 239
           +L+SLSEQQLVDCD  CDP++  +CD+GC GGLM +A+EY+++AGG+E E+ YPYTG   
Sbjct: 180 KLLSLSEQQLVDCDQACDPKDKKACDNGCGGGLMTNAYEYLMEAGGLEEERSYPYTGKR- 238

Query: 240 GSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICG 299
           G CKFD  K+A  V NF+ I  DE+Q+AANLV+HGPLAVG+NAV+MQTYIGGVSCP IC 
Sbjct: 239 GHCKFDPEKVAVRVLNFTTIPLDENQIAANLVRHGPLAVGLNAVFMQTYIGGVSCPLICS 298

Query: 300 KY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMV 358
           K  ++HGVL+VGYGS GF+ +R   KPYWIIKNSWG+ WGENGYYK+C G ++CG++SMV
Sbjct: 299 KRNVNHGVLLVGYGSKGFSILRLSNKPYWIIKNSWGKKWGENGYYKLCRGHDICGINSMV 358

Query: 359 SSVA 362
           S+VA
Sbjct: 359 SAVA 362


>gi|52546912|gb|AAU81589.1| cysteine proteinase [Petunia x hybrida]
          Length = 257

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 192/241 (79%), Positives = 215/241 (89%), Gaps = 1/241 (0%)

Query: 128 KAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQ 187
           KAPILPT+DLP DFDWR+ GAVTGVK+QG+CGSCWSFS TGA+EGAHFL+TGELVSLSEQ
Sbjct: 15  KAPILPTSDLPDDFDWREKGAVTGVKNQGSCGSCWSFSTTGAVEGAHFLATGELVSLSEQ 74

Query: 188 QLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKS 247
           QLVDCDHECD E+   CD+GC GGLM +AFEY LKAGG++REKDYPYTG DG  C FDKS
Sbjct: 75  QLVDCDHECDAEQQNECDAGCGGGLMTTAFEYTLKAGGLQREKDYPYTGRDG-KCHFDKS 133

Query: 248 KIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVL 307
           KIAA+V+NFSV+  DEDQ+AANLVKHGPLAVGINA WMQTY+GGVSCP IC K  DHGVL
Sbjct: 134 KIAASVANFSVVGLDEDQIAANLVKHGPLAVGINAAWMQTYVGGVSCPLICFKRQDHGVL 193

Query: 308 IVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIHTT 367
           +VGYGS+GFAPIR KEKPYWIIKNSWGE+WGE GYYKIC GRN+CGVD+MVS+V A HTT
Sbjct: 194 LVGYGSAGFAPIRLKEKPYWIIKNSWGESWGEQGYYKICRGRNICGVDAMVSTVTAAHTT 253

Query: 368 S 368
           +
Sbjct: 254 N 254


>gi|297816790|ref|XP_002876278.1| hypothetical protein ARALYDRAFT_485911 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322116|gb|EFH52537.1| hypothetical protein ARALYDRAFT_485911 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 368

 Score =  417 bits (1073), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 200/365 (54%), Positives = 265/365 (72%), Gaps = 8/365 (2%)

Query: 4   LILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLL--NAEHHFSLFKSKFS 61
           ++  +L  L+   +    V  + +D  IRQV  +D  +   +LL  + E  F +F S + 
Sbjct: 1   MVAKALAQLITCIIFFCHVVASVEDLTIRQVT-ADERRVRPNLLGTHTESKFRVFMSDYG 59

Query: 62  KTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRR-- 119
           K Y+T+EE+ +R  +F  N+ +A   Q++DPTAVHGVT+FSDLT  EF+R + G+     
Sbjct: 60  KNYSTREEYIHRLGIFAKNVLKAAEHQMMDPTAVHGVTQFSDLTEEEFKRMYTGVADVGG 119

Query: 120 LRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTG 179
            R  A   +AP++  + LP DFDWR+ G VT VK+QGACGSCW+FS TGA EGAHF+STG
Sbjct: 120 SRGHAVGAEAPMVEVDGLPEDFDWREKGGVTEVKNQGACGSCWAFSTTGAAEGAHFVSTG 179

Query: 180 ELVSLSEQQLVDCDHE-CDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTD 238
           +L+SLSEQQLVDCD   CDP++  +CD+GC GGLM +A+EY+++AGG+E E+ YPYTG  
Sbjct: 180 KLLSLSEQQLVDCDQAVCDPKDKKACDNGCGGGLMTNAYEYLMEAGGLEEERSYPYTGKR 239

Query: 239 GGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYIC 298
            G CKFD  K+A  V NF+ I  DEDQ+AANLV+ GPLAVG+NAV+MQTYIGGVSCP IC
Sbjct: 240 -GHCKFDPEKVAVRVVNFTTIPLDEDQIAANLVRQGPLAVGLNAVFMQTYIGGVSCPLIC 298

Query: 299 GKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSM 357
            K  ++HGVL+VGYGS GF+ +R   KPYWIIKNSWG+ WGENGYYK+C G ++CG++SM
Sbjct: 299 SKRKVNHGVLLVGYGSKGFSILRLSNKPYWIIKNSWGKKWGENGYYKLCRGHDICGINSM 358

Query: 358 VSSVA 362
           VS+VA
Sbjct: 359 VSAVA 363


>gi|53748485|emb|CAH59428.1| cysteine protease 2 [Plantago major]
          Length = 245

 Score =  416 bits (1068), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 194/247 (78%), Positives = 223/247 (90%), Gaps = 3/247 (1%)

Query: 124 ADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVS 183
           AD  KAP LPT++LP +FDWR+ GAVT VK+QG+CGSCWSFS TGALEGA++L+TGEL+S
Sbjct: 1   ADENKAPKLPTSNLPEEFDWREKGAVTAVKNQGSCGSCWSFSTTGALEGANYLATGELIS 60

Query: 184 LSEQQLVDCDHECDPEESG-SCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSC 242
           LSEQQLVDCDHECDPEE   SCD+GCNGGLMN+AFEY LKAGG+++EKDYPYTG DG +C
Sbjct: 61  LSEQQLVDCDHECDPEEGADSCDAGCNGGLMNNAFEYALKAGGLQKEKDYPYTGKDG-TC 119

Query: 243 KFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYL 302
           KFDK+KIAA+V NFSV+S DEDQ+AANLVK+GPLAVGINA WMQTYIGGVSCPYICGK L
Sbjct: 120 KFDKTKIAASVHNFSVVSIDEDQIAANLVKYGPLAVGINAAWMQTYIGGVSCPYICGKSL 179

Query: 303 DHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVA 362
           DHGVLIVGYG +G+AP+R K KPYWIIKNSWGE+WGE+GYYKIC GRNVCGV+SMVSSV 
Sbjct: 180 DHGVLIVGYG-TGYAPVRLKNKPYWIIKNSWGESWGESGYYKICRGRNVCGVESMVSSVT 238

Query: 363 AIHTTSS 369
           A H T++
Sbjct: 239 AAHFTTT 245


>gi|449449489|ref|XP_004142497.1| PREDICTED: cysteine proteinase 15A-like [Cucumis sativus]
          Length = 406

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 195/365 (53%), Positives = 260/365 (71%), Gaps = 9/365 (2%)

Query: 4   LILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKT 63
           L+  ++ L LL S + SA A+  D   +RQV  +DGE   +    +E  F +F  K+ K+
Sbjct: 42  LLACAISLALLISAIPSATALRRDPEFLRQV--TDGEIFNNLPAGSERKFVMFMEKYGKS 99

Query: 64  YATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLR-- 121
           Y T++E+ +RF +F  NL RA   Q LDPTAVHGVT+FSDL+  EF R F+G+       
Sbjct: 100 YPTRKEYLHRFGIFVKNLIRAAEHQALDPTAVHGVTQFSDLSEEEFERMFMGVRGGAGGE 159

Query: 122 -LPADAQKAPILP--TNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLST 178
            LP   Q   +       LP  FDWRD GAVT VK QG CGSCW+FS  GA+EGA+F++T
Sbjct: 160 GLPEMNQAVEVTAEEVKGLPERFDWRDKGAVTEVKMQGTCGSCWAFSTCGAVEGANFIAT 219

Query: 179 GELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTD 238
           G L++LSEQQLVDCDH CDP +  +C++GCNGGLM +A++Y++++GG+E E  YPYTG  
Sbjct: 220 GNLLNLSEQQLVDCDHTCDPTDKTACNNGCNGGLMTNAYKYLIQSGGLEEESSYPYTGRS 279

Query: 239 GGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYIC 298
            G C F   KIA  VSNF+ I  DE+Q+AA+LV+ GPLAVG+NAV+MQTYIGGVSCP IC
Sbjct: 280 -GQCNFQSDKIAVKVSNFTTIPIDENQIAAHLVRSGPLAVGLNAVFMQTYIGGVSCPLIC 338

Query: 299 GK-YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSM 357
           GK +++HGVL+VGYG  GF+ +RF++ PYW+IKNSWGE WGE+GYY++C G  +CG+++M
Sbjct: 339 GKRFVNHGVLMVGYGDEGFSILRFRKLPYWVIKNSWGERWGEHGYYRLCRGHGMCGINTM 398

Query: 358 VSSVA 362
           VS+V 
Sbjct: 399 VSAVV 403


>gi|449487301|ref|XP_004157559.1| PREDICTED: cysteine proteinase 15A-like [Cucumis sativus]
          Length = 406

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 195/365 (53%), Positives = 260/365 (71%), Gaps = 9/365 (2%)

Query: 4   LILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKT 63
           L+  ++ L LL S + SA A+  D   +RQV  +DGE   +    +E  F +F  K+ K+
Sbjct: 42  LLACAISLALLISAIPSATALRRDPEFLRQV--TDGEIFNNLPAGSERKFVMFMEKYGKS 99

Query: 64  YATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLR-- 121
           Y T++E+ +RF +F  NL RA   Q LDPTAVHGVT+FSDL+  EF R F+G+       
Sbjct: 100 YPTRKEYLHRFGIFVKNLIRAAEHQALDPTAVHGVTQFSDLSEEEFERMFMGVRGGAGGE 159

Query: 122 -LPADAQKAPILP--TNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLST 178
            LP   Q   +       LP  FDWRD GAVT VK QG CGSCW+FS  GA+EGA+F++T
Sbjct: 160 GLPEMNQAVEVTAEEVKGLPERFDWRDKGAVTEVKMQGTCGSCWAFSTCGAVEGANFIAT 219

Query: 179 GELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTD 238
           G L++LSEQQLVDCDH CDP +  +C++GCNGGLM +A++Y++++GG+E E  YPYTG  
Sbjct: 220 GNLLNLSEQQLVDCDHTCDPTDKTACNNGCNGGLMTNAYKYLIQSGGLEEESSYPYTGRS 279

Query: 239 GGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYIC 298
            G C F   KIA  VSNF+ I  DE+Q+AA+LV+ GPLAVG+NAV+MQTYIGGVSCP IC
Sbjct: 280 -GQCNFQSDKIAVKVSNFTTIPIDENQIAAHLVRSGPLAVGLNAVFMQTYIGGVSCPLIC 338

Query: 299 GK-YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSM 357
           GK +++HGVL+VGYG  GF+ +RF++ PYW+IKNSWGE WGE+GYY++C G  +CG+++M
Sbjct: 339 GKRFVNHGVLMVGYGDEGFSILRFRKLPYWVIKNSWGERWGEHGYYRLCRGHGMCGINTM 398

Query: 358 VSSVA 362
           VS+V 
Sbjct: 399 VSAVV 403


>gi|4678299|emb|CAB41090.1| cysteine proteinase precursor-like protein [Arabidopsis thaliana]
          Length = 363

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 197/364 (54%), Positives = 262/364 (71%), Gaps = 11/364 (3%)

Query: 4   LILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLL--NAEHHFSLFKSKFS 61
           ++  +L  L+   +L   V  + +D  IRQV  +D  +   +LL  + E  F LF S + 
Sbjct: 1   MVAKALAQLITCIILFCHVVASVEDLTIRQVT-ADNRRIRPNLLGTHTESKFRLFMSDYG 59

Query: 62  KTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRR-- 119
           K Y+T+EE+ +R  +F  N+ +A   Q++DP+AVHGVT+FSDLT  EF+R + G+     
Sbjct: 60  KNYSTREEYIHRLGIFAKNVLKAAEHQMMDPSAVHGVTQFSDLTEEEFKRMYTGVADVGG 119

Query: 120 LRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTG 179
            R      +AP++  + LP DFDWR+ G VT VK+QGACGSCW+FS TGA EGAHF+STG
Sbjct: 120 SRGGTVGAEAPMVEVDGLPEDFDWREKGGVTEVKNQGACGSCWAFSTTGAAEGAHFVSTG 179

Query: 180 ELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDG 239
           +L+SLSEQQLVDCD      +  +CD+GC GGLM +A+EY+++AGG+E E+ YPYTG   
Sbjct: 180 KLLSLSEQQLVDCDQ----ADKKACDNGCGGGLMTNAYEYLMEAGGLEEERSYPYTGKR- 234

Query: 240 GSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICG 299
           G CKFD  K+A  V NF+ I  DE+Q+AANLV+HGPLAVG+NAV+MQTYIGGVSCP IC 
Sbjct: 235 GHCKFDPEKVAVRVLNFTTIPLDENQIAANLVRHGPLAVGLNAVFMQTYIGGVSCPLICS 294

Query: 300 KY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMV 358
           K  ++HGVL+VGYGS GF+ +R   KPYWIIKNSWG+ WGENGYYK+C G ++CG++SMV
Sbjct: 295 KRNVNHGVLLVGYGSKGFSILRLSNKPYWIIKNSWGKKWGENGYYKLCRGHDICGINSMV 354

Query: 359 SSVA 362
           S+VA
Sbjct: 355 SAVA 358


>gi|357473651|ref|XP_003607110.1| Cysteine proteinase [Medicago truncatula]
 gi|355508165|gb|AES89307.1| Cysteine proteinase [Medicago truncatula]
          Length = 331

 Score =  403 bits (1036), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 203/367 (55%), Positives = 251/367 (68%), Gaps = 42/367 (11%)

Query: 2   ERLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFS 61
           +  +L S+L L  S  LA ++  + +D +I+QVV   G         AE+ F+ FK +F 
Sbjct: 6   QTFMLFSVLFLFFSVDLAFSMPKDREDPIIQQVVDKGG---------AEYQFNEFKQRFG 56

Query: 62  KTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLR 121
           K Y++++EHDYRF VFK+NL RAKR  ++DP+A HGVT+FSDLTP EFR   LGL + + 
Sbjct: 57  KVYSSKDEHDYRFNVFKSNLHRAKRHGIMDPSATHGVTRFSDLTPREFRNSILGL-KGVG 115

Query: 122 LPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGEL 181
           LP  A+ APIL T +LP DFDWR+ GAVT V++QG CGS WSFS  GALEGAHFLS+GEL
Sbjct: 116 LPRHAKAAPILSTENLPRDFDWREKGAVTPVRNQGFCGSSWSFSTIGALEGAHFLSSGEL 175

Query: 182 VSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGS 241
           VSLSEQ  VDCDHE                       YI K GG+ R +DY Y  T+   
Sbjct: 176 VSLSEQHHVDCDHE-----------------------YIQKYGGLMRVEDYTYYKTNTAR 212

Query: 242 CKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKY 301
                    +  +NFS IS D++Q+ ANLVKHGPLA  INAV+MQTY+GG+SCPYIC + 
Sbjct: 213 ---------SVAANFSSISVDDNQITANLVKHGPLAAAINAVYMQTYVGGISCPYICTRR 263

Query: 302 LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSV 361
           LD GVL+VGYGS   A ++ KEKPYWI+KNSWGE WGENGYYKIC GRN+CGVDSMVS+V
Sbjct: 264 LDLGVLLVGYGSGAGADMKEKEKPYWIVKNSWGETWGENGYYKICRGRNICGVDSMVSTV 323

Query: 362 AAIHTTS 368
           AA HTT+
Sbjct: 324 AAAHTTT 330


>gi|351726954|ref|NP_001236888.1| cysteine proteinase precursor [Glycine max]
 gi|479060|emb|CAA83673.1| cysteine proteinase [Glycine max]
 gi|300507422|gb|ADK24076.1| cysteine proteinase [Glycine max]
 gi|300507425|gb|ADK24077.1| cysteine proteinase [Glycine max]
 gi|1096153|prf||2111244A Cys protease
          Length = 380

 Score =  400 bits (1027), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 191/360 (53%), Positives = 257/360 (71%), Gaps = 9/360 (2%)

Query: 4   LILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKT 63
           + L+ + L L +  L++A        + R++   D E     LL  E  F +F   + ++
Sbjct: 10  MCLARVSLFLCALTLSAAHGSTTVQDIARKLKLGDNE-----LLRTEKKFKVFMENYGRS 64

Query: 64  YATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLP 123
           Y+T+EE+  R  +F  N+ RA   Q LDPTAVHGVT+FSDLT  EF + + G+N      
Sbjct: 65  YSTEEEYLRRLGIFAQNMVRAAEHQALDPTAVHGVTQFSDLTEDEFEKLYTGVNGGFPSS 124

Query: 124 ADAQK--APILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGEL 181
            +A    AP L  + LP +FDWR+ GAVT VK QG CGSCW+FS TG++EGA+FL+TG+L
Sbjct: 125 NNAAGGIAPPLEVDGLPENFDWREKGAVTEVKLQGRCGSCWAFSTTGSIEGANFLATGKL 184

Query: 182 VSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGS 241
           VSLSEQQL+DCD++CD  E  SCD+GCNGGLM +A+ Y+L++GG+E E  YPYTG + G 
Sbjct: 185 VSLSEQQLLDCDNKCDITEKTSCDNGCNGGLMTNAYNYLLESGGLEEESSYPYTG-ERGE 243

Query: 242 CKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICG-K 300
           CKFD  KIA  ++NF+ I +DE+Q+AA LVK+GPLA+G+NA++MQTYIGGVSCP IC  K
Sbjct: 244 CKFDPEKIAVKITNFTNIPADENQIAAYLVKNGPLAMGVNAIFMQTYIGGVSCPLICSKK 303

Query: 301 YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSS 360
            L+HGVL+VGYG+ GF+ +R   KPYWIIKNSWGE WGE+GYYK+C G  +CG+++MVS+
Sbjct: 304 RLNHGVLLVGYGAKGFSILRLGNKPYWIIKNSWGEKWGEDGYYKLCRGHGMCGINTMVSA 363


>gi|294462776|gb|ADE76932.1| unknown [Picea sitchensis]
          Length = 403

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 192/367 (52%), Positives = 263/367 (71%), Gaps = 13/367 (3%)

Query: 4   LILSS-LLLLLLSSVLASAVAVND----DDAMIRQVVPSDGEQSEDHLLN--AEHHFSLF 56
           L+L+  + LL++S+ ++ ++ +++    +   I QV     + + +HLLN  ++  F  F
Sbjct: 37  LVLAGCMFLLVISTQISFSLGLDNGRVSEGGFIAQVTE---KFNREHLLNLRSKTLFDKF 93

Query: 57  KSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGL 116
             +  K Y+T EE+  R R+F+ NL +A   Q LDPTAVHG+T FSDLT  EF  ++ GL
Sbjct: 94  IVEHGKVYSTIEEYVRRLRIFEKNLLKAAENQALDPTAVHGITPFSDLTEYEFESRYTGL 153

Query: 117 -NRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHF 175
              R  L  + Q A ILP +DLP +FDWR+ GAVT VK QG CGSCW+FS TG +EGA+F
Sbjct: 154 LGVRQGLVNEKQTAEILPVDDLPANFDWREKGAVTEVKTQGNCGSCWAFSTTGVVEGANF 213

Query: 176 LSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYT 235
           L+TG+L++LSEQQL+DCDH+CDP  + +CD+GC+GGLM +A+ Y+++AGG+E  K+YPYT
Sbjct: 214 LATGKLLNLSEQQLIDCDHKCDPLNTKACDNGCHGGLMTNAYNYLMEAGGIEEAKNYPYT 273

Query: 236 GTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCP 295
           G   G CKF+    A    NF+ ++ DE Q+AANLVKHGPLAVG+NA +MQTYIGGVSCP
Sbjct: 274 GVQ-GDCKFNPDLAAVKAINFTTVNLDEKQIAANLVKHGPLAVGLNAAFMQTYIGGVSCP 332

Query: 296 YICGK-YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGV 354
            IC K +++HGVL+VGYG  GFA +R   +PYWIIKNSWG+ WGE+GYYK+C G   CG+
Sbjct: 333 LICSKRFINHGVLLVGYGHKGFALLRLGYRPYWIIKNSWGKRWGEHGYYKLCRGHGECGM 392

Query: 355 DSMVSSV 361
           + MVS+V
Sbjct: 393 NKMVSAV 399


>gi|2511695|emb|CAB17077.1| cysteine proteinase precursor [Phaseolus vulgaris]
          Length = 377

 Score =  397 bits (1019), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 187/364 (51%), Positives = 254/364 (69%), Gaps = 11/364 (3%)

Query: 8   SLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQ 67
           SL+L  L+   A    V+D        +    +  ++ LL  E  F++F   + K Y+T+
Sbjct: 16  SLVLFALTLSSARQTTVHD--------IAKKLKLQDNQLLRTEKKFNVFMENYGKKYSTR 67

Query: 68  EEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQ 127
           EE+  R  +F  N+ RA   Q LDPTA+HGVT+FSDLT  EF+R + G+N         +
Sbjct: 68  EEYLQRLEIFAGNMLRAPENQALDPTAIHGVTQFSDLTEDEFQRHYTGVNGGFPWNNGVR 127

Query: 128 K-APILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSE 186
             AP L  + LP DFDWR+ GAVT VK QG CGSCW+FS TG++EGA+F++TG+L++LSE
Sbjct: 128 DVAPPLKVDGLPEDFDWREKGAVTEVKMQGKCGSCWAFSTTGSIEGANFIATGKLLNLSE 187

Query: 187 QQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDK 246
           QQLVDCD +CD  ES +CD+GC GGLM +A++Y+L++GG+E E  YPYTG   G CKFD 
Sbjct: 188 QQLVDCDSQCDITESTTCDNGCMGGLMTNAYKYLLQSGGLEEESSYPYTGAK-GECKFDP 246

Query: 247 SKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICG-KYLDHG 305
            K+A  ++NF+ I  DE+Q+AA LVKHGPLAVG+NA++MQTYIGGVSCP IC  K+L+HG
Sbjct: 247 GKVAVRITNFTNIPVDENQIAAYLVKHGPLAVGLNAIFMQTYIGGVSCPLICSKKWLNHG 306

Query: 306 VLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIH 365
           VL+VGY + GF+ +R   KPYWIIKNSWG+ WG +GYYK+C G  +CG+++MVS+     
Sbjct: 307 VLLVGYRAKGFSILRLGNKPYWIIKNSWGKRWGVDGYYKLCRGHGMCGMNTMVSTAMVTQ 366

Query: 366 TTSS 369
           T ++
Sbjct: 367 TQTA 370


>gi|357473731|ref|XP_003607150.1| Cysteine proteinase [Medicago truncatula]
 gi|355508205|gb|AES89347.1| Cysteine proteinase [Medicago truncatula]
          Length = 326

 Score =  396 bits (1017), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 203/366 (55%), Positives = 252/366 (68%), Gaps = 48/366 (13%)

Query: 4   LILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKT 63
           L+L S+L L  S  LA +   + +D +I+QVV   G         AEH F+ FK +F K 
Sbjct: 7   LMLFSVLFLFFSVDLAFSTPNDREDPIIQQVVDKGG---------AEHQFNEFKQRFGKV 57

Query: 64  YATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLP 123
           Y++++EHDYRF VFK+NL RAKR  ++DP+A HGVT+FSDLTP EFR   LGL + + LP
Sbjct: 58  YSSKDEHDYRFNVFKSNLHRAKRHVIMDPSATHGVTRFSDLTPREFRNSILGL-KGVGLP 116

Query: 124 ADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVS 183
             A+ APIL + +LP DFDWR+ GAVT V++QG CGS WSFS  GALEGA+FLSTGELVS
Sbjct: 117 RHAKAAPILSSENLPRDFDWREKGAVTPVRNQGFCGSSWSFSTIGALEGANFLSTGELVS 176

Query: 184 LSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCK 243
           LS+QQ VDCDH                       EYI K+GG+ R +DY Y         
Sbjct: 177 LSDQQHVDCDH-----------------------EYIKKSGGLMRVEDYTYY-------- 205

Query: 244 FDKSKIAAAV-SNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYL 302
             K+ IA +V +NFS +  D+DQ+AANL+K+GPLAV INA +MQTY+GGVSCPY C + L
Sbjct: 206 --KTNIARSVAANFSSVLVDDDQIAANLLKYGPLAVAINAAYMQTYVGGVSCPYTCTRRL 263

Query: 303 DHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVA 362
           DHGVL+VGYGS  +     KEKPYWI+K+SWGE WGENGYYKIC GRN+CGVDSMVS+VA
Sbjct: 264 DHGVLLVGYGSGAYT----KEKPYWIVKSSWGETWGENGYYKICRGRNICGVDSMVSTVA 319

Query: 363 AIHTTS 368
           A  TT+
Sbjct: 320 AAQTTT 325


>gi|1619905|gb|AAB16997.1| thiol protease isoform A, partial [Glycine max]
          Length = 318

 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 188/250 (75%), Positives = 216/250 (86%), Gaps = 4/250 (1%)

Query: 120 LRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTG 179
           +R PA AQKAPILPT DLP DFDWRD GAVT VKD G CGSCWSFS TGALE + +L+TG
Sbjct: 71  VRFPAHAQKAPILPTKDLPKDFDWRDKGAVTNVKDLGGCGSCWSFSTTGALEVSFYLATG 130

Query: 180 ELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDG 239
           ELVSLSEQQLVDCDH CDPEE G+CDSGCNGGLMN+AFE IL++GGV++EKD PYTG D 
Sbjct: 131 ELVSLSEQQLVDCDHVCDPEEYGACDSGCNGGLMNNAFE-ILQSGGVQKEKDIPYTGRD- 188

Query: 240 GSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICG 299
           G+CKFDK+K+ AA      +S DE+Q+AANLVK+GPLAV INAV+MQTY+GGVSCPYICG
Sbjct: 189 GTCKFDKTKV-AATDLIKRVSLDEEQIAANLVKNGPLAVAINAVFMQTYVGGVSCPYICG 247

Query: 300 KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGEN-GYYKICMGRNVCGVDSMV 358
           K+LDHGVL+VGYG   +APIRFK KPYWIIKNSWGE+WGEN GY +IC GRNVCGVD+MV
Sbjct: 248 KHLDHGVLLVGYGEGRYAPIRFKNKPYWIIKNSWGESWGENDGYDEICRGRNVCGVDAMV 307

Query: 359 SSVAAIHTTS 368
           S+VAAI+ +S
Sbjct: 308 STVAAIYASS 317


>gi|224113123|ref|XP_002316398.1| predicted protein [Populus trichocarpa]
 gi|222865438|gb|EEF02569.1| predicted protein [Populus trichocarpa]
          Length = 327

 Score =  393 bits (1010), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 179/319 (56%), Positives = 236/319 (73%), Gaps = 2/319 (0%)

Query: 45  HLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDL 104
           +LL  E  F +F  + +K YAT+EE+ +RF +F  NL RA   Q LDPTA+HGVT F DL
Sbjct: 6   NLLGTEEKFKMFIKEHNKEYATREEYVHRFGIFGKNLIRAVEHQALDPTAIHGVTPFMDL 65

Query: 105 TPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSF 164
           T  EF R + G+     +P +      +  + LP  FDWR+ GAVT VK QG+CGSCW+F
Sbjct: 66  TEEEFERMYAGVLGGGTVPVEKGSVSFMDASGLPDSFDWREKGAVTDVKIQGSCGSCWAF 125

Query: 165 SATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAG 224
           S TG++EGA+F++TG+L++LSEQQLVDCD  CD  +  SCD GC GGLM +A+ Y+++AG
Sbjct: 126 STTGSVEGANFIATGKLLNLSEQQLVDCDRVCDKTDKASCDDGCGGGLMTNAYRYLIEAG 185

Query: 225 GVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW 284
           G++ E  YPYTG   G CKFD  KIA  V+NF+ I+ DE+Q+AANLV HGPLA+G+NA++
Sbjct: 186 GLQEESSYPYTGKS-GECKFDPEKIAVKVANFTSIAVDENQIAANLVHHGPLAIGLNAIF 244

Query: 285 MQTYIGGVSCPYICG-KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYY 343
           MQTYIGGVSCP ICG K+L+HGVL+VGYG+ G++ +RF  KPYWIIKNSWG +WGE GYY
Sbjct: 245 MQTYIGGVSCPLICGKKWLNHGVLLVGYGARGYSILRFGYKPYWIIKNSWGNHWGEKGYY 304

Query: 344 KICMGRNVCGVDSMVSSVA 362
           ++C G  +CG++ MVS+V 
Sbjct: 305 RLCRGHGMCGMNKMVSAVV 323


>gi|2414683|emb|CAB16316.1| cysteine proteinase precursor [Vicia sativa]
          Length = 379

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 188/354 (53%), Positives = 246/354 (69%), Gaps = 12/354 (3%)

Query: 9   LLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQE 68
           L  L LSS L     + D        V    E  ++ LL  E  F LF   +SK Y+T E
Sbjct: 19  LCALTLSSSLHHETLIQD--------VARKLELKDNDLLTTEKKFKLFMKDYSKKYSTTE 70

Query: 69  EHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRL-RLPADAQ 127
           E+  R  +F  N+ +A   Q LDPTA+HGVT+FSDL+  EF R + G         A   
Sbjct: 71  EYLLRLGIFAKNMVKAAEHQALDPTAIHGVTQFSDLSEEEFERFYTGFKGGFPSSNAAGG 130

Query: 128 KAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQ 187
            AP L     P +FDWR+ GAVTG+K QG CGSCW+F+ TG++EGA+FL+TG+LVSLSEQ
Sbjct: 131 VAPPLDVKGFPENFDWREKGAVTGIKTQGKCGSCWAFTTTGSIEGANFLATGKLVSLSEQ 190

Query: 188 QLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKS 247
           QLVDCD++CD  ++ SCD+GCNGGLM +A++Y+++AGG+E E  YPYTG   G CKFD +
Sbjct: 191 QLVDCDNKCDITKT-SCDNGCNGGLMTTAYDYLMEAGGLEEETSYPYTGAQ-GECKFDPN 248

Query: 248 KIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGK-YLDHGV 306
           K+A  VSNF+ I +DE+Q+AA LV HGPLA+ +NAV+MQTY+GGVSCP IC K  L+HGV
Sbjct: 249 KVAVRVSNFTNIPADENQIAAYLVNHGPLAIAVNAVFMQTYVGGVSCPLICSKRRLNHGV 308

Query: 307 LIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSS 360
           L+VGY + GF+ +R ++KPYW IKNSWGE WGE GYYK+C G  +CG+++MVS+
Sbjct: 309 LLVGYNAEGFSILRLRKKPYWTIKNSWGEQWGEKGYYKLCRGHGMCGMNTMVSA 362


>gi|115457680|ref|NP_001052440.1| Os04g0311400 [Oryza sativa Japonica Group]
 gi|113564011|dbj|BAF14354.1| Os04g0311400, partial [Oryza sativa Japonica Group]
          Length = 384

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 179/237 (75%), Positives = 207/237 (87%), Gaps = 4/237 (1%)

Query: 134 TNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCD 193
           T+ LP DFDWR+HGAV  VKDQG+CGSCWSFS +GALEGAHFL+TG+L  LSEQQ+VDCD
Sbjct: 145 TDGLPDDFDWREHGAVGPVKDQGSCGSCWSFSTSGALEGAHFLATGKLEVLSEQQMVDCD 204

Query: 194 HECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAV 253
           HECD  ES +CDSGCNGGLM +AF Y++K+GG++ EKDYPY G +  +CKFDKSKI A V
Sbjct: 205 HECDASESRACDSGCNGGLMTTAFSYLMKSGGLQSEKDYPYAGREN-TCKFDKSKIVAQV 263

Query: 254 SNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGS 313
            NFSVIS +EDQ+AANLVKHGPLA+ INA +MQTYIGGVSCP+ICG++LDHGVL+VGYGS
Sbjct: 264 KNFSVISVNEDQIAANLVKHGPLAIAINAAYMQTYIGGVSCPFICGRHLDHGVLLVGYGS 323

Query: 314 SGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMG---RNVCGVDSMVSSVAAIHTT 367
           +G+APIRFKEKPYWIIKNSWGENWGE GYYKIC G   +N CGVDSMVSSV AIHT+
Sbjct: 324 AGYAPIRFKEKPYWIIKNSWGENWGEKGYYKICRGPHDKNKCGVDSMVSSVTAIHTS 380


>gi|351629613|gb|AEQ54770.1| cysteine proteinase CP1 [Coffea canephora]
          Length = 397

 Score =  390 bits (1003), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 194/387 (50%), Positives = 255/387 (65%), Gaps = 28/387 (7%)

Query: 4   LILSSLLLLLLSSVLASAVAVN-------DDDAMIRQVVPSD------GEQSEDHLL--- 47
           ++  +L + LLS  L S+            D  MIRQV  +       G  S +H L   
Sbjct: 9   MLTCTLAITLLSCALISSTTFQHEIQYRVQDPLMIRQVTDNHHHRHHPGRSSANHRLLGT 68

Query: 48  NAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPS 107
             E HF  F  ++ KTY+T EE+ +R  +F  NL +A   Q +DP+A+HGVT+FSDLT  
Sbjct: 69  TTEVHFKSFVEEYEKTYSTHEEYVHRLGIFAKNLIKAAEHQAMDPSAIHGVTQFSDLTEE 128

Query: 108 EFRRQFLGLNRRLRLPADAQKAP----------ILPTNDLPTDFDWRDHGAVTGVKDQGA 157
           EF   ++GL     +    Q             ++  +DLP  FDWR+ GAVT VK QG 
Sbjct: 129 EFEATYMGLKGGAGVGGTTQLGKDDGDESAAEVMMDVSDLPESFDWREKGAVTEVKTQGR 188

Query: 158 CGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAF 217
           CGSCW+FS TGA+EGA+F++TG+L+SLSEQQLVDCDH CD +E   CD GC+GGLM +AF
Sbjct: 189 CGSCWAFSTTGAIEGANFIATGKLLSLSEQQLVDCDHMCDLKEKDDCDDGCSGGLMTTAF 248

Query: 218 EYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLA 277
            Y+++AGG+E E  YPYTG   G CKF+  K+A  V NF+ I  DE Q+AAN+V +GPLA
Sbjct: 249 NYLIEAGGIEEEVTYPYTGKR-GECKFNPEKVAVKVRNFAKIPEDESQIAANVVHNGPLA 307

Query: 278 VGINAVWMQTYIGGVSCPYIC-GKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGEN 336
           +G+NAV+MQTYIGGVSCP IC  K ++HGVL+VGYGS GF+ +R   KPYWIIKNSWG+ 
Sbjct: 308 IGLNAVFMQTYIGGVSCPLICDKKRINHGVLLVGYGSRGFSILRLGYKPYWIIKNSWGKR 367

Query: 337 WGENGYYKICMGRNVCGVDSMVSSVAA 363
           WGE+GYY++C G N+CG+ +MVS+V  
Sbjct: 368 WGEHGYYRLCRGHNMCGMSTMVSAVVT 394


>gi|356576257|ref|XP_003556249.1| PREDICTED: LOW QUALITY PROTEIN: cysteine proteinase 15A-like
           [Glycine max]
          Length = 374

 Score =  390 bits (1001), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 187/356 (52%), Positives = 249/356 (69%), Gaps = 10/356 (2%)

Query: 6   LSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYA 65
           L+ + L L +  L+SA        + R++   D E     LL  E  F +F   + ++Y+
Sbjct: 12  LARVSLFLFALTLSSAHESTTVHDIARKLKVGDNE-----LLRTEKKFKVFMENYGRSYS 66

Query: 66  TQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPAD 125
           T+EE+  R  +F  N+ RA   Q LDPTAVHGVT+FSDLT  EF + + G          
Sbjct: 67  TREEYLRRLGIFSQNMLRAAEHQALDPTAVHGVTQFSDLTEVEFEKLYTGXPST---NTA 123

Query: 126 AQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLS 185
              AP L    LP +FDWR+ GAVT VK QG CGSCW+FS TG++EGA+FL+TG+LVSLS
Sbjct: 124 GGVAPPLEVEGLPENFDWREKGAVTEVKIQGRCGSCWAFSTTGSIEGANFLATGKLVSLS 183

Query: 186 EQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFD 245
           EQQL+DCD++C+  E  SCD+GCNGGLM +A+ Y+L++GG+E E  YPYTG + G CKFD
Sbjct: 184 EQQLLDCDNKCEITEKTSCDNGCNGGLMTNAYNYLLESGGLEEESSYPYTG-ERGECKFD 242

Query: 246 KSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICG-KYLDH 304
             KI   ++NF+ I  DE+Q+AA LVK+GPLA+G+NA++MQTYIGGVSCP IC  K L+H
Sbjct: 243 PEKITVRITNFTNIPVDENQIAAYLVKNGPLAMGVNAIFMQTYIGGVSCPLICSKKRLNH 302

Query: 305 GVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSS 360
           GVL+VGYG+ GF+ +R   KPYWIIKNSWG+ WGE+GYYK+C G  +CG+++MVS+
Sbjct: 303 GVLLVGYGAKGFSILRLGNKPYWIIKNSWGKKWGEDGYYKLCRGHGMCGINTMVSA 358


>gi|225448924|ref|XP_002266821.1| PREDICTED: cysteine proteinase 15A-like [Vitis vinifera]
          Length = 375

 Score =  387 bits (995), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 178/321 (55%), Positives = 237/321 (73%), Gaps = 3/321 (0%)

Query: 44  DHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSD 103
           D +L  E  F +F  K+ K Y+++EE+ +R  +F  N+ RA   Q LDPTA+HGVT FSD
Sbjct: 52  DGVLGTEKEFRMFMEKYGKEYSSREEYVHRLGIFAKNMVRAAEHQALDPTALHGVTPFSD 111

Query: 104 LTPSEFRRQFLGLNRRLRLPAD-AQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCW 162
           L+  EF R F G+  R  +    A+ A  L  + LP  FDWR+ GAVT VK QG CGSCW
Sbjct: 112 LSEEEFERMFTGVVGRPHMKGGVAETAAALEVDGLPESFDWREKGAVTEVKMQGTCGSCW 171

Query: 163 SFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK 222
           +FS TGA+EGAHF+ST +L++LSEQQLVDCDH CD  +  +CDSGC GGLM +A++Y+++
Sbjct: 172 AFSTTGAVEGAHFISTKKLLTLSEQQLVDCDHMCDIRDKTACDSGCEGGLMTNAYKYLIE 231

Query: 223 AGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA 282
           AGG+E E  YPYTG   G CKF   ++A  V NF+ +  +E+Q+AANLV HGPLAVG+NA
Sbjct: 232 AGGLEEESSYPYTGKH-GECKFKPDRVAVRVVNFTEVPINENQIAANLVCHGPLAVGLNA 290

Query: 283 VWMQTYIGGVSCPYICGK-YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENG 341
           ++MQTYIGGVSCP IC K +++HGVL+VGYG+ G++ +RF  KPYWIIKNSWG+ WGE+G
Sbjct: 291 IFMQTYIGGVSCPLICPKRWINHGVLLVGYGAKGYSILRFGYKPYWIIKNSWGKRWGEHG 350

Query: 342 YYKICMGRNVCGVDSMVSSVA 362
           YY++C G  +CG+++MVS+V 
Sbjct: 351 YYRLCRGHGMCGMNTMVSAVV 371


>gi|255585361|ref|XP_002533377.1| cysteine protease, putative [Ricinus communis]
 gi|223526784|gb|EEF29008.1| cysteine protease, putative [Ricinus communis]
          Length = 381

 Score =  387 bits (994), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 185/318 (58%), Positives = 234/318 (73%), Gaps = 3/318 (0%)

Query: 48  NAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPS 107
           N E +F +F  K+ K Y T+EE+ +R  VF  NL RA   Q+LDPTAVHG+T F DLT  
Sbjct: 62  NTEENFKMFMIKYDKEYDTREEYMHRLGVFAKNLIRAAEHQVLDPTAVHGITPFMDLTEE 121

Query: 108 EFRRQFLGLNRRLRLPADAQKAP-ILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSA 166
           EF R + G+     + A+   A   L T  LP+ FDWR  GAVT VK QGACGSCW+FS 
Sbjct: 122 EFERMYTGVVGGGAVGAEGVTATSFLETAGLPSSFDWRKKGAVTDVKMQGACGSCWAFST 181

Query: 167 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGV 226
           TGA+EGA+F++TG+L++LSEQQLVDCD  CD +E  +CD GC GGLM +A+ Y+++AGG+
Sbjct: 182 TGAIEGANFIATGKLLNLSEQQLVDCDRVCDIKEKTACDDGCGGGLMTNAYRYLIEAGGL 241

Query: 227 EREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQ 286
           E E  YPYTG   G CKFD+ KIA  V NF+ I  DE+Q+AA+LV HGPLA+G+NAV+MQ
Sbjct: 242 EDEISYPYTGKP-GKCKFDEKKIAVRVVNFTSIPIDENQIAAHLVHHGPLAIGLNAVFMQ 300

Query: 287 TYIGGVSCPYICG-KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKI 345
           TYIGGVSCP ICG K+++HGVL+VGYG+ GF+ +R   KPYWIIKNSWG+ WGE GYY+I
Sbjct: 301 TYIGGVSCPLICGKKWINHGVLLVGYGAKGFSILRLGYKPYWIIKNSWGKRWGEEGYYRI 360

Query: 346 CMGRNVCGVDSMVSSVAA 363
           C G  +CG+D MVS+V  
Sbjct: 361 CKGYGMCGMDRMVSAVVT 378


>gi|147809367|emb|CAN64491.1| hypothetical protein VITISV_015725 [Vitis vinifera]
          Length = 321

 Score =  383 bits (983), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 175/317 (55%), Positives = 232/317 (73%), Gaps = 3/317 (0%)

Query: 47  LNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTP 106
           +  E  F +F  K+ K Y+++EE+ +R  +F  N+ RA   Q LDP A+HGVT FSDL+ 
Sbjct: 1   MGGEKEFRMFMEKYGKEYSSREEYVHRLGIFAKNMVRAAEHQALDPXALHGVTPFSDLSE 60

Query: 107 SEFRRQFLGLNRRLRLPAD-AQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFS 165
            EF R F G+  R  +    A+ A  L  + LP  FDWR+ GAVT VK QG CGSCW+FS
Sbjct: 61  EEFERMFTGVVGRPHMKGGVAETAAALEVDGLPESFDWREKGAVTEVKMQGTCGSCWAFS 120

Query: 166 ATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGG 225
            TGA+EGAHF+ST +L++LSEQQLVDCDH CD  +  +CDSGC GGLM +A++Y+++AGG
Sbjct: 121 TTGAVEGAHFISTKKLLTLSEQQLVDCDHMCDIRDKXACDSGCEGGLMTNAYKYLIEAGG 180

Query: 226 VEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWM 285
           +E E  YPYTG   G CKF   ++A  V NF+ +  BE+Q+AANLV HGPLAVG+NA +M
Sbjct: 181 LEEESSYPYTGKH-GECKFKPDRVAVRVVNFTEVPIBENQIAANLVCHGPLAVGLNAXFM 239

Query: 286 QTYIGGVSCPYICGK-YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYK 344
           QTYIGGVSCP IC K +++HGVL+VGYG+ G++ +RF  KPYWIIKNSWG  WGE+GYY+
Sbjct: 240 QTYIGGVSCPLICPKRWINHGVLLVGYGAKGYSILRFGYKPYWIIKNSWGXRWGEHGYYR 299

Query: 345 ICMGRNVCGVDSMVSSV 361
           +C G  +CG+++MVS+V
Sbjct: 300 LCRGHGMCGMNTMVSAV 316


>gi|5679322|gb|AAD46920.1|AF167986_1 putative cysteine proteinase GmPM33 [Glycine max]
          Length = 363

 Score =  377 bits (968), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 183/358 (51%), Positives = 247/358 (68%), Gaps = 22/358 (6%)

Query: 4   LILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKT 63
           + L+ + L L +  L++A        + R++   D E     LL  E  F +F   + ++
Sbjct: 10  MCLARVSLFLCALTLSAAHGSTTVQDIARKLKLGDNE-----LLRTEKKFKVFMENYGRS 64

Query: 64  YATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLP 123
           Y+T+EE+  R  +F  N+ RA   Q LDPTAVHGVT+FS    +                
Sbjct: 65  YSTEEEYLRRLGIFAQNMVRAAEHQALDPTAVHGVTQFSLPVSNN--------------- 109

Query: 124 ADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVS 183
           A    AP L  + LP +FDWR+ GAVT VK QG CGSCW+FS TG++EGA+FL+TG+LVS
Sbjct: 110 AAGGIAPPLEVDGLPENFDWREKGAVTEVKLQGRCGSCWAFSTTGSIEGANFLATGKLVS 169

Query: 184 LSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCK 243
           LS+QQL+DCD++CD  E  SCD+GCNGGLM +A+ Y+L++GG+E E  YPYTG + G CK
Sbjct: 170 LSDQQLLDCDNKCDITEKTSCDNGCNGGLMTNAYNYLLESGGLEEESSYPYTG-ERGECK 228

Query: 244 FDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICG-KYL 302
           FD  KIA  ++NF+ I +DE+Q+AA LVK+GPLA+G+NA++MQTYIGGVSCP IC  K L
Sbjct: 229 FDPEKIAVKITNFTNIPADENQIAAYLVKNGPLAMGVNAIFMQTYIGGVSCPLICSKKRL 288

Query: 303 DHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSS 360
           +HGVL+VGYG+ GF+ +R   KPYWIIKNSWGE WGE+GYYK+C G  +CG+++MVS+
Sbjct: 289 NHGVLLVGYGAKGFSILRLGNKPYWIIKNSWGEKWGEDGYYKLCRGHGMCGINTMVSA 346


>gi|242045644|ref|XP_002460693.1| hypothetical protein SORBIDRAFT_02g033270 [Sorghum bicolor]
 gi|241924070|gb|EER97214.1| hypothetical protein SORBIDRAFT_02g033270 [Sorghum bicolor]
          Length = 373

 Score =  370 bits (949), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 190/355 (53%), Positives = 241/355 (67%), Gaps = 22/355 (6%)

Query: 25  NDDDAMIRQVVPSDGEQSEDHL----LNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKAN 80
           + DD  IRQV  +DG +S        L  E  F+ F  +  + Y+  EE+  R RVF AN
Sbjct: 19  STDDGFIRQV--TDGRRSRAGAGALGLLPEAQFAAFVRRHGRRYSGPEEYARRLRVFAAN 76

Query: 81  LRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQK-----APILP-- 133
           L RA   Q LDPTA HGVT FSDLT  EF  +  G+  R     D Q+     AP  P  
Sbjct: 77  LARAAAHQALDPTARHGVTPFSDLTREEFEARLTGV--RAGAGGDVQRLVMSGAPAAPPA 134

Query: 134 ----TNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQL 189
                + LP  FDWRD GAVTGVK QGACGSCW+FS TGA+EGA+FL+TG+L+ LSEQQL
Sbjct: 135 SQEEVSRLPASFDWRDKGAVTGVKMQGACGSCWAFSTTGAVEGANFLATGKLLELSEQQL 194

Query: 190 VDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKI 249
           VDCDH C       C++GC GGLM +A+ Y++K+GG+  ++ YPYTG   G C+FD +K 
Sbjct: 195 VDCDHTCSAVAQNECNNGCAGGLMTNAYAYLMKSGGLMEQRAYPYTGAP-GPCRFDPAKA 253

Query: 250 AAAVSNFSVI-SSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGK-YLDHGVL 307
           A  V+NF+ + + DE Q+ A LV+ GPLAVG+NA +MQTY+GGVSCP +C + +++HGVL
Sbjct: 254 AVRVANFTAVPAGDEAQIRAALVRRGPLAVGLNAAFMQTYVGGVSCPLLCPRAWVNHGVL 313

Query: 308 IVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVA 362
           +VGYG+ GFA +R   +PYWIIKNSWGE WGE GYY++C G NVCGVDSMVS+VA
Sbjct: 314 LVGYGARGFAALRLGYRPYWIIKNSWGERWGEQGYYRLCRGSNVCGVDSMVSAVA 368


>gi|414590229|tpg|DAA40800.1| TPA: putative cysteine protease family protein [Zea mays]
          Length = 381

 Score =  369 bits (946), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 186/348 (53%), Positives = 233/348 (66%), Gaps = 17/348 (4%)

Query: 27  DDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKR 86
           DD  IRQV            L  E  F+ F  +  + Y+  +E+  R RVF ANL RA  
Sbjct: 34  DDKFIRQVTTQGTRAGAGPGLLPEAQFAAFVRRHGRRYSGPKEYARRLRVFAANLARAAA 93

Query: 87  RQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQK----APILPTND------ 136
            Q LDPTA HGVT FSDLT  EF  +  GL    R   D Q+     P  P         
Sbjct: 94  HQALDPTARHGVTPFSDLTREEFEARLTGL----RAGGDVQRLMSGVPAAPPASKEEVAR 149

Query: 137 LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHEC 196
           LP  FDWRD GAVTGVK QGACGSCW+FS TGA+EGA+FL+TGELV LSEQQLVDCDH C
Sbjct: 150 LPASFDWRDKGAVTGVKTQGACGSCWAFSTTGAVEGANFLATGELVDLSEQQLVDCDHTC 209

Query: 197 DPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNF 256
                  C++GC GGLM +A+ Y++++GG+  +  YPYTG   G C+FD +++A  V+NF
Sbjct: 210 SAVAQNECNNGCAGGLMTNAYSYLMESGGLMEQSAYPYTGA-AGPCRFDPTQVAVRVANF 268

Query: 257 SVI-SSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGK-YLDHGVLIVGYGSS 314
           + + + DE Q+ A LV+ GPLAVG+NA +MQTY+GGVSCP IC + +++HGVL+VGYG+ 
Sbjct: 269 TAVPAGDEAQIRAALVRRGPLAVGLNAAFMQTYVGGVSCPLICPRAWVNHGVLLVGYGAR 328

Query: 315 GFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVA 362
           GFA +R   +PYWIIKNSWG+ WGE GYY++C G NVCGVDSMVS+VA
Sbjct: 329 GFAALRLGYRPYWIIKNSWGKQWGEQGYYRLCRGSNVCGVDSMVSAVA 376


>gi|115472081|ref|NP_001059639.1| Os07g0480900 [Oryza sativa Japonica Group]
 gi|27261016|dbj|BAC45132.1| putative cysteine proteinase [Oryza sativa Japonica Group]
 gi|113611175|dbj|BAF21553.1| Os07g0480900 [Oryza sativa Japonica Group]
 gi|215693312|dbj|BAG88694.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 376

 Score =  369 bits (946), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 191/347 (55%), Positives = 241/347 (69%), Gaps = 20/347 (5%)

Query: 31  IRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLL 90
           IRQV  +DG      LL  E  F+ F  +  + Y+  EE+  R RVF ANL RA   Q L
Sbjct: 29  IRQV--TDGGYWPPGLL-PEAQFAAFVRRHGREYSGPEEYARRLRVFAANLARAAAHQAL 85

Query: 91  DPTAVHGVTKFSDLTPSEFRRQFLGLN-------RRLRLPADAQKAPILPTNDLPTDFDW 143
           DPTA HGVT FSDLT  EF  +  GL        RR  +P+ A  A     + LP  FDW
Sbjct: 86  DPTARHGVTPFSDLTREEFEARLTGLAADVGDDVRRRPMPS-AAPATEEEVSGLPASFDW 144

Query: 144 RDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGS 203
           RD GAVT VK QGACGSCW+FS TGA+EGA+FL+TG L+ LSEQQLVDCDH CD E+   
Sbjct: 145 RDRGAVTDVKMQGACGSCWAFSTTGAVEGANFLATGNLLDLSEQQLVDCDHTCDAEKKTE 204

Query: 204 CDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVIS--- 260
           CDSGC GGLM +A+ Y++ +GG+  +  YPYTG   G+C+FD +++A  V+NF+V++   
Sbjct: 205 CDSGCGGGLMTNAYAYLMSSGGLMEQSAYPYTGAQ-GTCRFDANRVAVRVANFTVVAPPG 263

Query: 261 -SDED---QMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGK-YLDHGVLIVGYGSSG 315
            +D D   QM A LV+HGPLAVG+NA +MQTY+GGVSCP +C + +++HGVL+VGYG  G
Sbjct: 264 GNDGDGDAQMRAALVRHGPLAVGLNAAYMQTYVGGVSCPLVCPRAWVNHGVLLVGYGERG 323

Query: 316 FAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVA 362
           FA +R   +PYWIIKNSWG+ WGE GYY++C GRNVCGVD+MVS+VA
Sbjct: 324 FAALRLGHRPYWIIKNSWGKAWGEQGYYRLCRGRNVCGVDTMVSAVA 370


>gi|218199600|gb|EEC82027.1| hypothetical protein OsI_25996 [Oryza sativa Indica Group]
          Length = 709

 Score =  368 bits (944), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 190/346 (54%), Positives = 239/346 (69%), Gaps = 22/346 (6%)

Query: 31  IRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLL 90
           IRQV  +DG      LL  E  F+ F  +  + Y+  EE+  R RVF ANL RA   Q L
Sbjct: 29  IRQV--TDGGYWPPGLL-PEAQFAAFVRRHGREYSGPEEYARRLRVFAANLARAAAHQAL 85

Query: 91  DPTAVHGVTKFSDLTPSEFRRQFLGLN--------RRLRLP-ADAQKAPILPTNDLPTDF 141
           DPTA HGVT FSDLT  EF  +  GL         RR RLP   A  A     + LP+ F
Sbjct: 86  DPTARHGVTPFSDLTREEFEARLTGLATDVGDDDVRRRRLPMPSAAPATEEEVSGLPSSF 145

Query: 142 DWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEES 201
           DWRD GAVTGVK QGACGSCW+FS TGA+EGA+FL+TG L+ LSEQQLVDCDH CD E+ 
Sbjct: 146 DWRDRGAVTGVKMQGACGSCWAFSTTGAVEGANFLATGNLLDLSEQQLVDCDHTCDAEKK 205

Query: 202 GSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVIS- 260
             CDSGC GGLM +A+ Y++ +GG+  +  YPYTG   G+C+FD +++A  V+NF+V++ 
Sbjct: 206 TECDSGCGGGLMTNAYAYLMSSGGLMEQSAYPYTGAQ-GACRFDANRVAVRVANFTVVAP 264

Query: 261 ------SDED-QMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGK-YLDHGVLIVGYG 312
                 +D D QM A LV+HGPLAVG+NA +MQTY+GGVSCP +C + +++HGVL+VGYG
Sbjct: 265 AAGPGGNDGDAQMRAALVRHGPLAVGLNAAYMQTYVGGVSCPLVCPRAWVNHGVLLVGYG 324

Query: 313 SSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMV 358
             GFA +R   +PYWIIKNSWG+ WGE GYY++C GRNVCGVD+M+
Sbjct: 325 ERGFAALRLGHRPYWIIKNSWGKAWGEQGYYRLCRGRNVCGVDTML 370


>gi|357116897|ref|XP_003560213.1| PREDICTED: probable cysteine proteinase A494-like [Brachypodium
           distachyon]
          Length = 373

 Score =  364 bits (935), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 193/357 (54%), Positives = 246/357 (68%), Gaps = 18/357 (5%)

Query: 19  ASAVAVNDDDAMIRQVV----PSDGEQSEDHLLNAEHHFSLFKSKFSKTYAT-QEEHDYR 73
           A+A A  DD  +IRQV     P+        LL  E  F+ F  +  K Y+   EE+  R
Sbjct: 19  AAAGASGDD--VIRQVTDNGAPAARRPPSPGLL-PEAKFAAFVRRHGKEYSGGAEEYARR 75

Query: 74  FRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRR---LRLPADAQKAP 130
            RVF ANL RA   Q LDP A HGVT FSDLTP EF+ +  GL ++     +PA A +A 
Sbjct: 76  LRVFAANLARAAAHQALDPGARHGVTPFSDLTPEEFQARLTGLQQQGTNNNMPA-AARAT 134

Query: 131 ILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLV 190
                 LP  FDWR  GAVT VK QG CGSCW+FS TGA+EGAHF++TG+L++LSEQQLV
Sbjct: 135 AEELATLPASFDWRAKGAVTEVKMQGMCGSCWAFSTTGAVEGAHFVATGKLLNLSEQQLV 194

Query: 191 DCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIA 250
           DCDH CD      CDSGC+GGLM +A+ Y+++AGG+  +  YPYTG  G +C+FD +K+A
Sbjct: 195 DCDHTCDAVAKNECDSGCSGGLMTNAYTYLIRAGGLMEQAAYPYTGAQG-TCRFDANKVA 253

Query: 251 AAVSNFSVISSD-EDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICG-KYLDHGVLI 308
             V++F+ +  D EDQ+ A+LV+ GPLAVG+NA +MQTY+GGVSCP +C  K ++HGVL+
Sbjct: 254 VRVTSFTAVPPDDEDQIRASLVRAGPLAVGLNAAFMQTYLGGVSCPLLCPRKLINHGVLL 313

Query: 309 VGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMG---RNVCGVDSMVSSVA 362
           VGYG+ G AP+R   +PYWIIKNSWG+ WGE GYY++C G   RNVCGVDSMVS+VA
Sbjct: 314 VGYGARGLAPLRLGYRPYWIIKNSWGKEWGEGGYYRLCRGARNRNVCGVDSMVSAVA 370


>gi|194352748|emb|CAQ00102.1| papain-like cysteine proteinase [Hordeum vulgare subsp. vulgare]
          Length = 368

 Score =  360 bits (923), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 185/340 (54%), Positives = 229/340 (67%), Gaps = 9/340 (2%)

Query: 30  MIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQL 89
           +IRQV  S        LL  E  F+ F  +  K Y+  EE+  R RVF AN+ RA   Q 
Sbjct: 28  VIRQVTDSGHGAGHPGLL-PEAQFAAFVRRHGKEYSGPEEYARRLRVFAANVARAAAHQA 86

Query: 90  LDPTAVHGVTKFSDLTPSEFRRQFLGLN------RRLRLPADAQKAPILPTNDLPTDFDW 143
           LDP A HGVT FSDLT  EF  +  GL       R  R    A  A       LP  FDW
Sbjct: 87  LDPGARHGVTPFSDLTREEFEARLTGLVGAGDVLRSARRMPAAAPATEEEVAALPASFDW 146

Query: 144 RDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGS 203
           RD GAVT VK QG CGSCW+FS TGA+EGA+F++TG+L+ LSEQQLVDCDH CD      
Sbjct: 147 RDKGAVTDVKMQGVCGSCWAFSTTGAVEGANFVATGKLLDLSEQQLVDCDHTCDAVAKTE 206

Query: 204 CDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDE 263
           C+SGC+GGLM +A+ Y++ +GG+  +  YPYTG   G C+FD+ K+A  V+NF+ +  DE
Sbjct: 207 CNSGCSGGLMTNAYRYLMSSGGLMEQAAYPYTGAQ-GPCRFDRGKVAVRVANFTAVPLDE 265

Query: 264 DQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYL-DHGVLIVGYGSSGFAPIRFK 322
           DQM A LV+ GPLAVG+NA +MQTY+GGVSCP IC + + +HGVL+VGYG+ GF+ +R  
Sbjct: 266 DQMRAALVRGGPLAVGLNAAFMQTYVGGVSCPLICPRAMVNHGVLLVGYGARGFSALRLG 325

Query: 323 EKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVA 362
            +PYW+IKNSWG  WGE GYYK+C GRNVCGVDSMVS+VA
Sbjct: 326 YRPYWLIKNSWGAQWGEGGYYKLCRGRNVCGVDSMVSAVA 365


>gi|308808478|ref|XP_003081549.1| Cysteine proteinase Cathepsin F (ISS) [Ostreococcus tauri]
 gi|116060014|emb|CAL56073.1| Cysteine proteinase Cathepsin F (ISS), partial [Ostreococcus tauri]
          Length = 293

 Score =  354 bits (909), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 171/285 (60%), Positives = 215/285 (75%), Gaps = 8/285 (2%)

Query: 81  LRRAKRRQLLDP-TAVHGVTKFSDLTPSEFRRQFLG---LNRRLRLPADAQKAPI--LPT 134
           L RA  +Q  D  +A HGVT+FSDLTP EF  ++LG   L+   R    A+   I  LPT
Sbjct: 3   LIRAATQQANDRGSAKHGVTRFSDLTPEEFAERYLGHVKLSSEHREKVRARGGVIEDLPT 62

Query: 135 NDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDH 194
             LP +FDWR  GAV+ VKDQG CGSCW+FS TGA+EGAHF+STG+LV LSEQQL+DCD 
Sbjct: 63  KHLPAEFDWRFKGAVSRVKDQGQCGSCWTFSTTGAIEGAHFISTGKLVELSEQQLLDCDV 122

Query: 195 ECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVS 254
            CDP+   +CDSGCNGGL ++A EYI++ GG++ EK YPY G + G CK D+  + A + 
Sbjct: 123 GCDPDVPNACDSGCNGGLPSNAMEYIVEHGGIDTEKSYPYVG-EKGECKADEGTLGATLK 181

Query: 255 NFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYIC-GKYLDHGVLIVGYGS 313
           NFS +SSDE QMAA LVKHGPL++GINA WMQTYIGGV+CP++C  + LDHGVLIVGYGS
Sbjct: 182 NFSYVSSDEKQMAAALVKHGPLSIGINAAWMQTYIGGVACPWLCDSEALDHGVLIVGYGS 241

Query: 314 SGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMV 358
           SGFAP+R++++PYWI+KNSW   WGE GYY+IC  +  CG+++MV
Sbjct: 242 SGFAPVRWQQEPYWIVKNSWSPAWGEGGYYRICKDKGSCGINNMV 286


>gi|5777611|emb|CAB53397.1| cysteine protease [Medicago sativa]
          Length = 209

 Score =  350 bits (897), Expect = 8e-94,   Method: Compositional matrix adjust.
 Identities = 166/210 (79%), Positives = 186/210 (88%), Gaps = 2/210 (0%)

Query: 158 CGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAF 217
           CGS W+FS TGALEGA++L+TG+LVSLSEQQLVDCDH CDPEE  SCDSGCNGGLMN+AF
Sbjct: 1   CGSGWAFSTTGALEGANYLATGKLVSLSEQQLVDCDHVCDPEERNSCDSGCNGGLMNNAF 60

Query: 218 EYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLA 277
           EYIL++GGV  EKDY YTG D GSCKFDKSKI A+VSNFSV+S DEDQ+AANLVK+GPLA
Sbjct: 61  EYILQSGGVVSEKDYAYTGRD-GSCKFDKSKIVASVSNFSVVSLDEDQIAANLVKNGPLA 119

Query: 278 VGINAVWMQTYIGGVSCPYICGK-YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGEN 336
           V INA WMQTY+ GVSCP+IC K  LDHGVL+VG+GS G+APIR KEKPYWIIKNSWG+N
Sbjct: 120 VAINAAWMQTYMSGVSCPHICAKARLDHGVLLVGFGSGGYAPIRLKEKPYWIIKNSWGQN 179

Query: 337 WGENGYYKICMGRNVCGVDSMVSSVAAIHT 366
           WGE GYYKIC GRNVCGVDSMVS+VAA  +
Sbjct: 180 WGEEGYYKICRGRNVCGVDSMVSTVAAAQS 209


>gi|412992445|emb|CCO18425.1| unknown [Bathycoccus prasinos]
          Length = 500

 Score =  338 bits (868), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 162/318 (50%), Positives = 220/318 (69%), Gaps = 24/318 (7%)

Query: 66  TQEEHDYRFRVFKANLRRAKRRQLLDP----TAVHGVTKFSDLTPSEFRRQFLGL----- 116
           T+EE++ R  +F+ N +RA  R++ D     +A HGVTKF DL+  EFR Q+LGL     
Sbjct: 188 TEEEYEKRMEIFQENWKRAIEREIDDRKGGGSAKHGVTKFFDLSEEEFREQYLGLLSTST 247

Query: 117 --------NRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATG 168
                    R+ ++ A +++        LP  +DWR  GAVT VKDQG CGSCW+FS TG
Sbjct: 248 SSSASKDAFRKHQMEAPSEE----DLEKLPQYYDWRARGAVTPVKDQGQCGSCWTFSTTG 303

Query: 169 ALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVER 228
           A+EGA+F+ TG+LVSLSEQQL+DCD  C P+   +CDSGCNGGL ++A EYI++ GG++ 
Sbjct: 304 AIEGANFIKTGKLVSLSEQQLLDCDVGCAPDIPNACDSGCNGGLPSNAMEYIVEHGGLDT 363

Query: 229 EKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTY 288
           EK YPY      +C+  + K+ A +SN++ +  +E  MA  LVK+GPL++GINA WMQ+Y
Sbjct: 364 EKSYPYKAYKEDTCRAKEGKLGATISNYTFVGKNETHMAHALVKYGPLSIGINAAWMQSY 423

Query: 289 IGGVSCPYICGK-YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICM 347
           +GGV+CP++C K  LDHGVLIVGYG  GFAP R  ++PYW+IKNSWG  WGE GYY+IC 
Sbjct: 424 VGGVACPWLCNKDALDHGVLIVGYGEEGFAPARLHKEPYWVIKNSWGMGWGEEGYYRICK 483

Query: 348 GRNVCGVDSMVSSVAAIH 365
            +  CGV++MV  VAA++
Sbjct: 484 DKGNCGVNNMV--VAALN 499


>gi|303275866|ref|XP_003057227.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226461579|gb|EEH58872.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 329

 Score =  333 bits (853), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 172/331 (51%), Positives = 218/331 (65%), Gaps = 23/331 (6%)

Query: 50  EHHFSLFKSKFSKTYATQ-EEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSE 108
           E  F  F  +  KTYA+  +E+  R  +F  N+ RAK     D  A +G T F+DLT  E
Sbjct: 5   ERDFDAFVLEHGKTYASDAKEYAKRLEIFAENMARAKEMSARD-GAEYGATPFADLTEDE 63

Query: 109 FRRQFLGLNRRLRLPADAQKA------------PILPTNDLPTDFDWRDHGAVTGVKDQG 156
           F    L     +R P DA +             P LPT ++P +FDWR  GAVT VK+QG
Sbjct: 64  FASSLL-----MREPIDAARVERLKRHESSRVLPHLPTENIPLNFDWRALGAVTPVKNQG 118

Query: 157 ACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSA 216
            CGSCWSFSATGA+EGAHF+ +G LVSLSEQQLVDCDH CDP+   +CDSGC+GGL  +A
Sbjct: 119 MCGSCWSFSATGAVEGAHFVKSGALVSLSEQQLVDCDHTCDPDSGTACDSGCDGGLPANA 178

Query: 217 FEYILKAGGVEREKDYPYTGTDG-GSCKF-DKSKIAAAVSNFSVISSDEDQMAANLVKHG 274
             Y++K GG++ E  YPY G  G G CK  +    AA ++N+S +S+DE Q+AA LVKHG
Sbjct: 179 MAYVVKRGGLDAEAAYPYLGARGDGRCKSKEDGPPAATITNYSFVSADESQIAAALVKHG 238

Query: 275 PLAVGINAVWMQTYIGGVSCPYICGK-YLDHGVLIVGYGSSGFAPIR-FKEKPYWIIKNS 332
           PL+VGI+A WMQ Y  GV+CP+ C K  LDHGVLIVG+G+ G AP R F+ +P+W+IKNS
Sbjct: 239 PLSVGIDARWMQLYRRGVACPWACDKTRLDHGVLIVGFGAEGRAPARGFRREPFWLIKNS 298

Query: 333 WGENWGENGYYKICMGRNVCGVDSMVSSVAA 363
           WG  WGE GYYKIC  +  CGV++MV +  A
Sbjct: 299 WGARWGEEGYYKICKDKGSCGVNTMVLAAQA 329


>gi|145351119|ref|XP_001419933.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144580166|gb|ABO98226.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 272

 Score =  333 bits (853), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 157/271 (57%), Positives = 196/271 (72%), Gaps = 8/271 (2%)

Query: 101 FSDLTPSEFRRQFLG------LNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKD 154
           FSDLT  EF  ++LG        R  R     +    LP   LP +FDWR  GAVT VKD
Sbjct: 2   FSDLTAEEFAARYLGHVRLSSEEREKRKARGGETLETLPVEHLPEEFDWRFKGAVTRVKD 61

Query: 155 QGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMN 214
           QG CGSCW+FS TGA+EGAHF+STG+LV LSEQQLVDCD  CDP+   +CDSGCNGGL +
Sbjct: 62  QGQCGSCWTFSTTGAIEGAHFISTGKLVELSEQQLVDCDVGCDPDVPNACDSGCNGGLPS 121

Query: 215 SAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHG 274
           +A EYI++ GG++ EK YPY G + G CK  K K+ A + NFS +S DE QMAA LVK+G
Sbjct: 122 NAMEYIVEHGGIDTEKSYPYVG-EKGECKAKKGKLGATLKNFSFVSDDEKQMAAALVKYG 180

Query: 275 PLAVGINAVWMQTYIGGVSCPYIC-GKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSW 333
           PL++GINA WMQ+YIGGV+CP++C  + LDHGVLIVGYGSSGFAP+R+  +PYWI+KNSW
Sbjct: 181 PLSIGINAAWMQSYIGGVACPWLCDAESLDHGVLIVGYGSSGFAPVRWAPEPYWIVKNSW 240

Query: 334 GENWGENGYYKICMGRNVCGVDSMVSSVAAI 364
              WGE GYY+IC  +  CG+++MV +   +
Sbjct: 241 SPAWGEGGYYRICKDKGSCGINNMVVAAHGV 271


>gi|388519111|gb|AFK47617.1| unknown [Medicago truncatula]
          Length = 241

 Score =  330 bits (846), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 155/202 (76%), Positives = 177/202 (87%), Gaps = 4/202 (1%)

Query: 24  VNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRR 83
            N DD +IRQVV    + +EDH+LNAEHHF+ FKSKFSK YAT+EEHDYRF VFK+NL +
Sbjct: 26  TNSDDLLIRQVV----DTAEDHILNAEHHFTSFKSKFSKNYATKEEHDYRFGVFKSNLIK 81

Query: 84  AKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDW 143
           AK  Q LDP+A HG+TKFSDLT SEFRRQFLGLN+RLRLPA AQKAPILPTN+LP DFDW
Sbjct: 82  AKLHQKLDPSAQHGITKFSDLTASEFRRQFLGLNKRLRLPAHAQKAPILPTNNLPEDFDW 141

Query: 144 RDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGS 203
           R+ GAVT VKDQG+CGSCW+FS TGALEGA++L+TG+L SLSEQQLVDCDH CDPEE GS
Sbjct: 142 REKGAVTPVKDQGSCGSCWAFSTTGALEGANYLATGKLTSLSEQQLVDCDHVCDPEERGS 201

Query: 204 CDSGCNGGLMNSAFEYILKAGG 225
           CDSGCNGGLMN+AFEYIL++GG
Sbjct: 202 CDSGCNGGLMNNAFEYILQSGG 223


>gi|52546916|gb|AAU81591.1| cysteine proteinase, partial [Petunia x hybrida]
          Length = 190

 Score =  330 bits (845), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 154/189 (81%), Positives = 170/189 (89%), Gaps = 1/189 (0%)

Query: 180 ELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDG 239
           ELVSLSEQQLVDCDHECDPEE  SCDSGCNGGLMNSAFEY LKAGG+ RE+DYPYTGTD 
Sbjct: 3   ELVSLSEQQLVDCDHECDPEEKDSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDR 62

Query: 240 GSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICG 299
             CKFD +K+AA V+NFSV+S DE+Q+AANLVK+GPLAV INAV+MQTY+GGVSCPYIC 
Sbjct: 63  AKCKFDNTKVAAKVANFSVVSLDEEQIAANLVKNGPLAVAINAVFMQTYVGGVSCPYICS 122

Query: 300 KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVS 359
           K  DHGVL+VGYG SGFAPIR KEKPYWIIKNSWGE WGE+GYYKIC GRNVCGVDSMVS
Sbjct: 123 KRQDHGVLLVGYG-SGFAPIRMKEKPYWIIKNSWGEKWGESGYYKICRGRNVCGVDSMVS 181

Query: 360 SVAAIHTTS 368
           +VAA+ T+S
Sbjct: 182 TVAAVSTSS 190


>gi|353441136|gb|AEQ94152.1| drought-inducible cysteine proteinase [Elaeis guineensis]
          Length = 252

 Score =  328 bits (840), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 167/241 (69%), Positives = 195/241 (80%), Gaps = 7/241 (2%)

Query: 11  LLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHL-LNAEHHFSLFKSKFSKTYATQEE 69
           + L +SV +S  +  +DD +I QVVP   E  ED L LNAE HFS F  +F K+YA ++E
Sbjct: 15  VALSASVASSWPSYAEDDPLIVQVVP---ESDEDELRLNAEAHFSSFLRRFGKSYADEKE 71

Query: 70  HDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLP---ADA 126
           H YRF VFKANLRRA+R Q +DPTAVHG+TKFSDLTP+EFRR +LGL    RL    A +
Sbjct: 72  HAYRFSVFKANLRRARRHQKMDPTAVHGITKFSDLTPAEFRRTYLGLRGGRRLRRALASS 131

Query: 127 QKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSE 186
            +APILPTN+LPTDFDWRDHGAVTGVKDQG+CGSCWSFSA+GALEGA+FL+TG+L SLSE
Sbjct: 132 HEAPILPTNNLPTDFDWRDHGAVTGVKDQGSCGSCWSFSASGALEGANFLATGQLESLSE 191

Query: 187 QQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDK 246
           QQLVDCDHECD  E  SCDSGCNGGLM +AFEY+LK+GG+E EKDYPYTGTD G CKFD+
Sbjct: 192 QQLVDCDHECDSSEPDSCDSGCNGGLMTTAFEYLLKSGGLELEKDYPYTGTDRGRCKFDE 251

Query: 247 S 247
           S
Sbjct: 252 S 252


>gi|255088003|ref|XP_002505924.1| cysteine endopeptidase [Micromonas sp. RCC299]
 gi|226521195|gb|ACO67182.1| cysteine endopeptidase [Micromonas sp. RCC299]
          Length = 291

 Score =  326 bits (836), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 164/289 (56%), Positives = 205/289 (70%), Gaps = 10/289 (3%)

Query: 84  AKRRQLLDP-TAVHGVTKFSDLTPSEFRRQFLGLNRR----LRLPADAQKAPILPTNDLP 138
           A  RQ  D  +AVHGVT+FSDLTP+EF   FLG          + +     P  P +DLP
Sbjct: 4   AAERQAQDRGSAVHGVTQFSDLTPTEFASTFLGTKLANEDVAAIRSGMTTLPDYPAHDLP 63

Query: 139 TDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDP 198
            +FDWR+ GAVT VK+QGACGSCW+FSATGA+EGA+FL TGELVSLSEQQLVDCDH CDP
Sbjct: 64  LEFDWRERGAVTPVKNQGACGSCWTFSATGAVEGANFLKTGELVSLSEQQLVDCDHTCDP 123

Query: 199 EESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSV 258
               +CD GCNGGL  +A  Y+ K  G++ E +YPY G DG          AA+VS+F++
Sbjct: 124 SAPRNCDYGCNGGLPLNAMRYVQKH-GLDTESNYPYKGVDGKCASARHGPAAASVSSFNL 182

Query: 259 ISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKY-LDHGVLIVGYGSSGFA 317
           +S++E Q+AA L+KHGPL++GI+A WMQTY+GGV+CP+IC K  LDHGVLIVGYG +G A
Sbjct: 183 VSTNETQIAAALLKHGPLSIGIDAAWMQTYVGGVACPWICNKAGLDHGVLIVGYGVNGTA 242

Query: 318 PIR--FKEKPYWIIKNSWGENWG-ENGYYKICMGRNVCGVDSMVSSVAA 363
           P R   + + YWI+KNSWG NWG E GYY IC  R  CG+++MV +  A
Sbjct: 243 PARPWHRRQDYWIVKNSWGPNWGVEGGYYHICKDRAACGLNTMVVAADA 291


>gi|296085959|emb|CBI31400.3| unnamed protein product [Vitis vinifera]
          Length = 257

 Score =  317 bits (812), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 143/237 (60%), Positives = 188/237 (79%), Gaps = 2/237 (0%)

Query: 126 AQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLS 185
           A+ A  L  + LP  FDWR+ GAVT VK QG CGSCW+FS TGA+EGAHF+ST +L++LS
Sbjct: 6   AETAAALEVDGLPESFDWREKGAVTEVKMQGTCGSCWAFSTTGAVEGAHFISTKKLLTLS 65

Query: 186 EQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFD 245
           EQQLVDCDH CD  +  +CDSGC GGLM +A++Y+++AGG+E E  YPYTG   G CKF 
Sbjct: 66  EQQLVDCDHMCDIRDKTACDSGCEGGLMTNAYKYLIEAGGLEEESSYPYTGKH-GECKFK 124

Query: 246 KSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGK-YLDH 304
             ++A  V NF+ +  +E+Q+AANLV HGPLAVG+NA++MQTYIGGVSCP IC K +++H
Sbjct: 125 PDRVAVRVVNFTEVPINENQIAANLVCHGPLAVGLNAIFMQTYIGGVSCPLICPKRWINH 184

Query: 305 GVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSV 361
           GVL+VGYG+ G++ +RF  KPYWIIKNSWG+ WGE+GYY++C G  +CG+++MVS+V
Sbjct: 185 GVLLVGYGAKGYSILRFGYKPYWIIKNSWGKRWGEHGYYRLCRGHGMCGMNTMVSAV 241


>gi|302774134|ref|XP_002970484.1| hypothetical protein SELMODRAFT_93661 [Selaginella moellendorffii]
 gi|300162000|gb|EFJ28614.1| hypothetical protein SELMODRAFT_93661 [Selaginella moellendorffii]
          Length = 343

 Score =  315 bits (807), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 168/365 (46%), Positives = 233/365 (63%), Gaps = 33/365 (9%)

Query: 6   LSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYA 65
           L+ +L+ LL  V+  + +   D   IRQV  +D  + +D     E HF  F  KF K Y 
Sbjct: 5   LAIILVGLLILVVCCSSSNRLDIGKIRQV--TDNLEVKD----VEGHFKHFMQKFGKVYG 58

Query: 66  TQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPAD 125
           T EE+ +R +VF+ANL      +  DPTA+HG+T F+DLTP E  R FLG  R+      
Sbjct: 59  TTEEYVHRLKVFQANLAHVMSLKKQDPTAIHGITSFADLTPEELSR-FLGF-RKAYSNRV 116

Query: 126 AQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLS 185
             +AP+LPT++LP  FDWR+HGAVT VK QG CGSCW+FS TG +EGA+FL TG+L+SLS
Sbjct: 117 VNQAPLLPTDNLPEAFDWREHGAVTPVKFQGRCGSCWTFSTTGVVEGANFLKTGKLISLS 176

Query: 186 EQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTD------G 239
           E+QL+DCD++         D+GC GG M SA+EY+ KA G+E E+DYPY           
Sbjct: 177 EEQLIDCDYK---------DNGCEGGDMLSAYEYV-KARGLEAEEDYPYEELGYRHKPVR 226

Query: 240 GSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICG 299
           G C++  SK+ A ++N+S +S DEDQ+AANLVK+GPL++ +    + TY GGV+CP IC 
Sbjct: 227 GPCRYQPSKVVATIANYSRVSEDEDQIAANLVKNGPLSIALRGNVLFTYEGGVACPRICP 286

Query: 300 KYLDHGVLIVGYG-SSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMV 358
             ++HGVL+VGYG  +G          YW  KN+W + +GENGY+++C G  VC ++S V
Sbjct: 287 GEINHGVLLVGYGVENGLR--------YWTFKNTWTDEFGENGYFRLCRGVGVCDMNSEV 338

Query: 359 SSVAA 363
            +V+ 
Sbjct: 339 GTVST 343


>gi|302793594|ref|XP_002978562.1| hypothetical protein SELMODRAFT_109056 [Selaginella moellendorffii]
 gi|300153911|gb|EFJ20548.1| hypothetical protein SELMODRAFT_109056 [Selaginella moellendorffii]
          Length = 343

 Score =  313 bits (803), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 168/365 (46%), Positives = 232/365 (63%), Gaps = 33/365 (9%)

Query: 6   LSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYA 65
           L+ +L+ LL  V+  + +   D   IRQV  +D  + +D     E HF  F  KF K Y 
Sbjct: 5   LAIILVGLLILVICCSSSNRLDIGKIRQV--TDNLEVDD----VEGHFKHFMQKFGKVYG 58

Query: 66  TQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPAD 125
           T EE+ +R +VF+ANL      +  DPTA+HG+T F+DLTP E  R FLG  R+      
Sbjct: 59  TTEEYVHRLKVFQANLVHVMSLKKQDPTAIHGITSFADLTPEELSR-FLGF-RKAYSNRV 116

Query: 126 AQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLS 185
             +AP+LPT++LP  FDWR+HGAVT VK QG CGSCW+FS TG +EGA+FL TG+L+SLS
Sbjct: 117 VNQAPLLPTDNLPEAFDWREHGAVTPVKFQGRCGSCWTFSTTGVVEGANFLKTGKLISLS 176

Query: 186 EQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTD------G 239
           E+QL+DCD++         D+GC GG M SA+EY+ KA G+E ++DYPY           
Sbjct: 177 EEQLIDCDYK---------DNGCEGGDMLSAYEYV-KARGLEADEDYPYEELGYRHKPVR 226

Query: 240 GSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICG 299
           G C++  SK+ A ++N+S +S DEDQ+AANLVK+GPL++ +    + TY GGV+CP IC 
Sbjct: 227 GPCRYQPSKVVATIANYSRVSEDEDQIAANLVKNGPLSIALRGNVLFTYEGGVACPRICP 286

Query: 300 KYLDHGVLIVGYG-SSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMV 358
             ++HGVL+VGYG  +G          YW  KNSW + +GENGY+++C G  VC + S V
Sbjct: 287 GEINHGVLLVGYGVENGLR--------YWTFKNSWTDEFGENGYFRLCRGVGVCDMTSEV 338

Query: 359 SSVAA 363
            +V+ 
Sbjct: 339 GTVST 343


>gi|1353726|gb|AAB01769.1| cysteine proteinase homolog, partial [Naegleria fowleri]
          Length = 347

 Score =  307 bits (787), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 159/319 (49%), Positives = 216/319 (67%), Gaps = 18/319 (5%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           F  F  K++K Y T EEH+ R+++FKAN+ +++    +      G+TKFSDLTP EF+R 
Sbjct: 33  FIKFSRKYAKVYGT-EEHNNRYQIFKANVEKSRYYNHVGKRENFGITKFSDLTPEEFKRM 91

Query: 113 FLGLNRRLRLPADAQKAPILPTNDL---------PTDFDWRDHGAVTGVKDQGACGSCWS 163
           FL    +   P +A+K    P + +         PT FDWR HGAVT VK+QGACGSCW+
Sbjct: 92  FL---MKTYTPEEAKKILAAPQHAVLSEKEVQTAPTSFDWRQHGAVTRVKNQGACGSCWT 148

Query: 164 FSATGALEGAHFLSTGELVSLSEQQLVDCDHEC-DPEESGSCDSGCNGGLMNSAFEYILK 222
           FS TG +EG   +  G+LVSLSEQQLVDCDH C   +   +CDSGCNGGLM SAF+Y++K
Sbjct: 149 FSTTGNVEGQWAIKKGKLVSLSEQQLVDCDHNCVTYQNQQACDSGCNGGLMWSAFQYVIK 208

Query: 223 AGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA 282
            GG++ E  YPY G D  +C+F+KS +AA +S+++ ISSDE+QMAA L  +GP+++ INA
Sbjct: 209 NGGLDTEDSYPYEGVD-DTCRFNKSNVAATISSWTSISSDENQMAAWLAANGPISIAINA 267

Query: 283 VWMQTYIGGVSCPYICG-KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENG 341
            W+Q Y  G+S P+ C  + LDHGVLIVGYG          E+ YWI+KNSWG +WGE+G
Sbjct: 268 EWLQYYTSGISDPWFCNPQDLDHGVLIVGYGVG--KSWLGSEENYWIVKNSWGSDWGEDG 325

Query: 342 YYKICMGRNVCGVDSMVSS 360
           Y++I  G+  CG++S+ SS
Sbjct: 326 YFRIIRGKGKCGLNSVPSS 344


>gi|290997496|ref|XP_002681317.1| cysteine protease [Naegleria gruberi]
 gi|284094941|gb|EFC48573.1| cysteine protease [Naegleria gruberi]
          Length = 350

 Score =  305 bits (781), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 155/319 (48%), Positives = 212/319 (66%), Gaps = 18/319 (5%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           F  F  K +K Y   E+H  R+++FK+N+ +A+    +      GV+KF DLTP EF+R 
Sbjct: 36  FVKFSKKHAKLYGA-EDHGKRYQIFKSNVEKARYYNHVGKRETFGVSKFMDLTPEEFKRM 94

Query: 113 FLGLNRRLRLPADAQKAPILP---------TNDLPTDFDWRDHGAVTGVKDQGACGSCWS 163
           FL    +   P +A+K    P           D PT +DWR  GAVT VK+QGACGSCW+
Sbjct: 95  FL---MKTYTPEEARKILAAPKEAVVTAQQVKDTPTSWDWRQKGAVTPVKNQGACGSCWT 151

Query: 164 FSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEE-SGSCDSGCNGGLMNSAFEYILK 222
           FS TG +EG H + TG+LVSLSEQQLVDCDH C   +   +CD+GCNGGLM SAF+Y++K
Sbjct: 152 FSTTGNVEGIHQIKTGKLVSLSEQQLVDCDHNCVTYQGQQACDAGCNGGLMWSAFQYVIK 211

Query: 223 AGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA 282
            GG+  E  YPY G D  +C+F+KS +A  +++++ I SDE +MAA L  +GP+++ INA
Sbjct: 212 TGGLVTEDSYPYEGVD-DTCRFNKSNVAVTINSWTSIPSDEGKMAAWLAANGPISIAINA 270

Query: 283 VWMQTYIGGVSCPYICG-KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENG 341
            W+QTY  G+S P+ C  + LDHGVLIVG+G +G   +  KE  YWIIKNSWG +WGE+G
Sbjct: 271 EWLQTYTSGISNPWFCNPQDLDHGVLIVGFG-TGSNWLGEKED-YWIIKNSWGADWGESG 328

Query: 342 YYKICMGRNVCGVDSMVSS 360
           Y++I  G+  CG++S+ SS
Sbjct: 329 YFRIVRGKGKCGLNSVPSS 347


>gi|2253415|gb|AAB62937.1| stress-induced cysteine proteinase [Lavatera thuringiaca]
          Length = 175

 Score =  304 bits (778), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 137/174 (78%), Positives = 160/174 (91%)

Query: 195 ECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVS 254
           ECDP++ G+C++GC+GGLM SAFEY LKAGG+ERE++YPYTG D G CKFDK+KIAA+VS
Sbjct: 1   ECDPQQYGACNAGCSGGLMTSAFEYTLKAGGLEREEEYPYTGIDRGGCKFDKTKIAASVS 60

Query: 255 NFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSS 314
           NFSVIS DEDQ+AAN+VKHGPLAVGINA +MQTYIGGVSCPYIC + LDHGVL+VGYG++
Sbjct: 61  NFSVISVDEDQIAANMVKHGPLAVGINAAFMQTYIGGVSCPYICFRSLDHGVLLVGYGAA 120

Query: 315 GFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIHTTS 368
           G+AP+RFKEKP+WIIKNSWG NWGE+GYYKIC GRNVCGVDSMVSSVAA+ T S
Sbjct: 121 GYAPVRFKEKPFWIIKNSWGANWGEDGYYKICRGRNVCGVDSMVSSVAALQTKS 174


>gi|260234113|dbj|BAI44279.1| cysteine proteinase inhibitor precursor [Manduca sexta]
 gi|261336196|dbj|BAH59606.2| cysteine proteinase inhibitor precursor [Manduca sexta]
          Length = 2676

 Score =  299 bits (766), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 156/322 (48%), Positives = 203/322 (63%), Gaps = 17/322 (5%)

Query: 45   HLLNAEHHFSLFKSKFSKTYAT-QEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFS 102
            H L AEH F  F S +   Y   + +   RF +FK N+R+       +  TA +GVT+F+
Sbjct: 2363 HHLQAEHLFYEFLSTYKPEYIDDRHQMRQRFEIFKENVRKMHELNTHERGTATYGVTRFA 2422

Query: 103  DLTPSEFRRQFLGLNRRLRLPADAQ-KAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSC 161
            DLT  EF  + +G+   LR P   Q +  ++P    P  FDWRDHGAVTGVKDQG+CGSC
Sbjct: 2423 DLTYEEFSTKHMGMKASLRDPNQVQFRKAVIPNVTAPDSFDWRDHGAVTGVKDQGSCGSC 2482

Query: 162  WSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYIL 221
            W+FS TG +EG   + TG+LVSLSEQ+LVDCD           D GCNGGL ++A+  I 
Sbjct: 2483 WAFSVTGNIEGQWKMKTGDLVSLSEQELVDCD---------KLDQGCNGGLPDNAYRAIE 2533

Query: 222  KAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGIN 281
            + GG+E E DYPY G+D   C F+K+     +S    I+S+E  MA  LVKHGP+++GIN
Sbjct: 2534 QLGGLESEDDYPYEGSD-DKCSFNKTLARVQISGAVNITSNETDMAKWLVKHGPISIGIN 2592

Query: 282  AVWMQTYIGGVSCPY--ICG-KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWG 338
            A  MQ Y+GG+S P+  +C    LDHGVLIVGYG+  + P+  K  PYWIIKNSWG +WG
Sbjct: 2593 ANAMQFYMGGISHPWRMLCNPSNLDHGVLIVGYGAKDY-PLFHKHLPYWIIKNSWGTSWG 2651

Query: 339  ENGYYKICMGRNVCGVDSMVSS 360
            E GYY++  G   CGV+ M SS
Sbjct: 2652 EQGYYRVYRGDGTCGVNQMASS 2673


>gi|290980288|ref|XP_002672864.1| predicted protein [Naegleria gruberi]
 gi|284086444|gb|EFC40120.1| predicted protein [Naegleria gruberi]
          Length = 356

 Score =  295 bits (754), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 163/373 (43%), Positives = 228/373 (61%), Gaps = 33/373 (8%)

Query: 1   MERLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKF 60
           M +LIL  ++LL+ S +LA   A    +A+          +SE   L     F+ F+ K 
Sbjct: 1   MNKLIL--VVLLVASFILAIEAAKGPFNAL---------PESEMQQL-----FTQFRRKH 44

Query: 61  SKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLG----- 115
            K Y T++  D R+++FK N+ RA+    L      GVT+FSDLTP EF+  FL      
Sbjct: 45  VKLYGTKQVQDRRYQIFKQNVERARFENYLTERDNMGVTRFSDLTPDEFKSMFLMKSYTP 104

Query: 116 ------LNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGA 169
                 L+   + PA+A K  +   +D P +FDWR+H AVT VKDQG CGSCW+FS TG 
Sbjct: 105 KQARELLSGMRQYPANA-KLTMKQVSDAPKEFDWREHNAVTPVKDQGNCGSCWTFSTTGN 163

Query: 170 LEGAHFLSTGELVSLSEQQLVDCDHECDP-EESGSCDSGCNGGLMNSAFEYILKAGGVER 228
           +EG +   TG+L+SLSEQQLVDCDH C   E   +C++GCNGGLM S+FE+I+K GG+  
Sbjct: 164 VEGMYAAKTGKLISLSEQQLVDCDHNCVVWEGEKTCNAGCNGGLMWSSFEHIIKTGGLVT 223

Query: 229 EKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTY 288
           E+ YPY   D   C+F+ S     +SN++ +SS+ED+MAA L  +GP+A+ INA ++Q Y
Sbjct: 224 EESYPYEAVD-NRCRFNVSNAVVKISNWTFVSSNEDEMAAWLANNGPIAIAINADYLQYY 282

Query: 289 IGGVSCPYICG-KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICM 347
             G+  P  C  + L+HGVLIVGYG    A    K + YWI+KNSW  +WGE GY ++  
Sbjct: 283 RKGILNPSRCDPEELNHGVLIVGYGEEKAA--NGKVEKYWIVKNSWSASWGEKGYVRVLR 340

Query: 348 GRNVCGVDSMVSS 360
           G+ VCG++++ SS
Sbjct: 341 GKGVCGLNAVPSS 353


>gi|156546466|ref|XP_001607324.1| PREDICTED: hypothetical protein LOC100123649 [Nasonia vitripennis]
          Length = 1036

 Score =  294 bits (753), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 155/322 (48%), Positives = 203/322 (63%), Gaps = 16/322 (4%)

Query: 47   LNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLT 105
            L  E  F  F  K+ K Y  +EE + RF++FK NL   +  Q  +  T  +GVT+F+DLT
Sbjct: 725  LKEEILFHEFMGKYKKMYHNKEEKEMRFQIFKDNLNLIEELQRNEMGTGRYGVTQFTDLT 784

Query: 106  PSEFRRQFLGLNRRLRLPAD-AQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSF 164
             +EF+ + LGL   L+   D       +P  +LP+D+DWR H  VT VKDQG+CGSCW+F
Sbjct: 785  KAEFKARHLGLKPTLKSENDIPMPMATIPDIELPSDYDWRHHNVVTPVKDQGSCGSCWAF 844

Query: 165  SATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAG 224
            S TG +EG + +  GEL+SLSEQ+LVDCD           DSGCNGGL ++A+  I + G
Sbjct: 845  SVTGNIEGQYAIKHGELLSLSEQELVDCD---------KLDSGCNGGLPDTAYRAIEELG 895

Query: 225  GVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW 284
            G+E E DYPY   D   C F+K+K+   + +   I+S+E QMA  LVK+GP+++GINA  
Sbjct: 896  GLELESDYPYDAED-EKCHFNKNKVKVNIVSGLNITSNETQMAQWLVKNGPMSIGINANA 954

Query: 285  MQTYIGGVSCP--YICGK-YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENG 341
            MQ Y+GGVS P  ++C    LDHGVLIVGYG   F PI  K  PYWIIKNSWG  WGE G
Sbjct: 955  MQFYMGGVSHPFKFLCSPDSLDHGVLIVGYGVK-FYPIFKKTMPYWIIKNSWGPRWGEQG 1013

Query: 342  YYKICMGRNVCGVDSMVSSVAA 363
            YY++  G   CGV+ MV+S   
Sbjct: 1014 YYRVYRGDGTCGVNKMVTSAVV 1035


>gi|350421176|ref|XP_003492760.1| PREDICTED: hypothetical protein LOC100745708 [Bombus impatiens]
          Length = 884

 Score =  293 bits (751), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 157/322 (48%), Positives = 202/322 (62%), Gaps = 22/322 (6%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTPSE 108
           E  F  F  KF KTY + +E   RF++FK NL+  +  Q  +  TA +GVT F+DLTP E
Sbjct: 576 ETLFEAFIKKFGKTYNSADEKLDRFKIFKQNLKIIEELQTFERGTAEYGVTMFADLTPKE 635

Query: 109 FRRQFLGLNRRLRLPADAQKAPI----LPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSF 164
           F+ ++LGL   L+      + P+    +P   LP  FDWRDH  VT VKDQG CGSCW+F
Sbjct: 636 FKARYLGLRPELK---HENEIPLPEAEIPDVSLPLKFDWRDHSVVTPVKDQGQCGSCWAF 692

Query: 165 SATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAG 224
           S TG +EG + +   +L+SLSEQ+LVDCD         S D GCNGG M +A++ I + G
Sbjct: 693 SVTGNVEGQYAIKHNQLLSLSEQELVDCD---------SLDEGCNGGDMENAYKAIERLG 743

Query: 225 GVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW 284
           G+E E DYPY   D   C F ++K    V +   I+SDE +MA  LVK+GP++VGINA  
Sbjct: 744 GLELESDYPYDAKD-EKCHFLQNKAKVQVVSAVNITSDEKRMAQWLVKNGPISVGINANA 802

Query: 285 MQTYIGGVSCP--YICG-KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENG 341
           MQ Y GGVS P  ++C  K LDHGVLIVGYG S + P+  KE PYWIIKNSWG  WGE G
Sbjct: 803 MQFYFGGVSHPLNFLCNPKNLDHGVLIVGYGISKY-PLFHKELPYWIIKNSWGPRWGERG 861

Query: 342 YYKICMGRNVCGVDSMVSSVAA 363
           YY++  G   CGV++M +S   
Sbjct: 862 YYRVYRGDGTCGVNTMATSAVV 883


>gi|405977658|gb|EKC42097.1| Cathepsin F [Crassostrea gigas]
          Length = 715

 Score =  290 bits (743), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 153/315 (48%), Positives = 206/315 (65%), Gaps = 22/315 (6%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTPSEFRR 111
           F  F++ F + Y +++E   RF++F  N+R+AK+ Q ++  TAV+GVTKF+D++ SEF+ 
Sbjct: 418 FQQFQAAFKRLYMSKQEEKTRFKIFCENMRKAKKLQDVEKGTAVYGVTKFADMSESEFK- 476

Query: 112 QFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALE 171
           Q++G           +KA I   N LP  FDWR+HGAVT VK+QG+CGSCW+FS TG +E
Sbjct: 477 QYVGKVWDQNANKGMKKAKIPEMNSLPNSFDWREHGAVTEVKNQGSCGSCWAFSTTGNIE 536

Query: 172 GAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKD 231
           G   +S  +LVSLSEQ+LVDCD           D GCNGGL + A++ I++ GG+E E D
Sbjct: 537 GQWAISKKKLVSLSEQELVDCD---------KVDEGCNGGLPSQAYKEIIRLGGLETETD 587

Query: 232 YPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGG 291
           Y Y G +   C  DKSKI   ++    ISS+E +MAA LVK+GP+++GINA  MQ Y+GG
Sbjct: 588 YKYRGHN-EKCSMDKSKIRVKINGSVSISSNETEMAAWLVKNGPISIGINAFAMQFYMGG 646

Query: 292 VSCPY--ICG-KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMG 348
           +S P+   C  K LDHGVLIVGYG  G        KPYWIIKNSWG +WGE GYY +  G
Sbjct: 647 ISHPWKIFCNPKELDHGVLIVGYGVKG-------SKPYWIIKNSWGPDWGEKGYYLVYRG 699

Query: 349 RNVCGVDSMVSSVAA 363
             VCG+++M +S   
Sbjct: 700 AGVCGLNTMCTSAVV 714


>gi|383863617|ref|XP_003707276.1| PREDICTED: uncharacterized protein LOC100880620 [Megachile
           rotundata]
          Length = 884

 Score =  288 bits (737), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 153/331 (46%), Positives = 209/331 (63%), Gaps = 21/331 (6%)

Query: 39  GEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKR-RQLLDPTAVHG 97
            E  +D LL     F  F   ++KTY + +E   R++VF+ NL+  ++ R+    TAV+G
Sbjct: 570 AEDYKDELL-----FEDFVKTYNKTYLSAKEKADRYKVFRKNLKMIEKLRKFEQGTAVYG 624

Query: 98  VTKFSDLTPSEFRRQFLGLNRRLRLPADAQ-KAPILPTNDLPTDFDWRDHGAVTGVKDQG 156
           VT F+DLTP EF+ ++LGL   L    D   +  ++P  DLP  FDWR++ AVT VKDQG
Sbjct: 625 VTMFADLTPEEFKTKYLGLKTNLNQENDIPLQEAVIPDIDLPPKFDWREYNAVTPVKDQG 684

Query: 157 ACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSA 216
            CGSCW+FSA G +EG + +   +L+SLSEQ+LVDCD+          D GC GG M +A
Sbjct: 685 QCGSCWAFSAIGNIEGQYAIKHKKLLSLSEQELVDCDN---------LDDGCGGGYMINA 735

Query: 217 FEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPL 276
           ++ + K GG+E E DYPY   +   C F K+K    V++   I++DE +MA  LVK+GP+
Sbjct: 736 YKTVEKLGGLELETDYPYDARN-EKCHFLKNKAKVQVASALNITNDEKKMAQWLVKNGPI 794

Query: 277 AVGINAVWMQTYIGGVSCP--YICGK-YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSW 333
           +VGINA  MQ Y GGVS P  ++C    LDHGVLIVGY +S + P+  K+ PYWIIKNSW
Sbjct: 795 SVGINANAMQFYFGGVSHPFKFLCDPANLDHGVLIVGYATSTY-PLFKKKLPYWIIKNSW 853

Query: 334 GENWGENGYYKICMGRNVCGVDSMVSSVAAI 364
           G  WGE GYY++  G   CGV++M SS   +
Sbjct: 854 GPKWGEQGYYRVYRGDGTCGVNAMASSAIVV 884


>gi|66803148|ref|XP_635417.1| cysteine proteinase 1 [Dictyostelium discoideum AX4]
 gi|166201987|sp|P04988.2|CYSP1_DICDI RecName: Full=Cysteine proteinase 1; Flags: Precursor
 gi|60463731|gb|EAL61909.1| cysteine proteinase 1 [Dictyostelium discoideum AX4]
          Length = 343

 Score =  287 bits (735), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 151/322 (46%), Positives = 195/322 (60%), Gaps = 12/322 (3%)

Query: 47  LNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLL----DPTAVHGVTKFS 102
           L  +  F  F+ KF+K Y + EE+  RF +FK+NL + +   L+          GV KF+
Sbjct: 23  LEEQSQFLEFQDKFNKKY-SHEEYLERFEIFKSNLGKIEELNLIAINHKADTKFGVNKFA 81

Query: 103 DLTPSEFRRQFLGLNRRLRLPADAQKAPILP---TNDLPTDFDWRDHGAVTGVKDQGACG 159
           DL+  EF+  +L  N+      D   A  L     N +PT FDWR  GAVT VK+QG CG
Sbjct: 82  DLSSDEFKNYYLN-NKEAIFTDDLPVADYLDDEFINSIPTAFDWRTRGAVTPVKNQGQCG 140

Query: 160 SCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHEC-DPEESGSCDSGCNGGLMNSAFE 218
           SCWSFS TG +EG HF+S  +LVSLSEQ LVDCDHEC + E   +CD GCNGGL  +A+ 
Sbjct: 141 SCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEQACDEGCNGGLQPNAYN 200

Query: 219 YILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAV 278
           YI+K GG++ E  YPYT   G  C F+ + I A +SNF++I  +E  MA  +V  GPLA+
Sbjct: 201 YIIKNGGIQTESSYPYTAETGTQCNFNSANIGAKISNFTMIPKNETVMAGYIVSTGPLAI 260

Query: 279 GINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWG 338
             +AV  Q YIGGV         LDHG+LIVGY +     I  K  PYWI+KNSWG +WG
Sbjct: 261 AADAVEWQFYIGGVFDIPCNPNSLDHGILIVGYSAKN--TIFRKNMPYWIVKNSWGADWG 318

Query: 339 ENGYYKICMGRNVCGVDSMVSS 360
           E GY  +  G+N CGV + VS+
Sbjct: 319 EQGYIYLRRGKNTCGVSNFVST 340


>gi|1617037|emb|CAA26255.1| cysteine proteinase I precursor [Dictyostelium discoideum]
          Length = 343

 Score =  286 bits (731), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 150/319 (47%), Positives = 194/319 (60%), Gaps = 12/319 (3%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLL----DPTAVHGVTKFSDLT 105
           +  F  F+ KF+K Y + EE+  RF +FK+NL + +   L+          GV KF+DL+
Sbjct: 26  QSQFLEFQDKFNKKY-SHEEYLERFEIFKSNLGKIEELNLIAINHKADTKFGVNKFADLS 84

Query: 106 PSEFRRQFLGLNRRLRLPADAQKAPILP---TNDLPTDFDWRDHGAVTGVKDQGACGSCW 162
             EF+  +L  N+      D   A  L     N +PT FDWR  GAVT VK+QG CGSCW
Sbjct: 85  SDEFKNYYLN-NKEAIFTDDLPVADYLDDEFINSIPTAFDWRTRGAVTPVKNQGQCGSCW 143

Query: 163 SFSATGALEGAHFLSTGELVSLSEQQLVDCDHEC-DPEESGSCDSGCNGGLMNSAFEYIL 221
           SFS TG +EG HF+S  +LVSLSEQ LVDCDHEC + E   +CD GCNGGL  +A+ YI+
Sbjct: 144 SFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEEACDEGCNGGLQPNAYNYII 203

Query: 222 KAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGIN 281
           K GG++ E  YPYT   G  C F+ + I A +SNF++I  +E  MA  +V  GPLA+  +
Sbjct: 204 KNGGIQTESSYPYTAETGTQCNFNSANIGAKISNFTMIPKNETVMAGYIVSTGPLAIAAD 263

Query: 282 AVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENG 341
           AV  Q YIGGV         LDHG+LIVGY +     I  K  PYWI+KNSWG +WGE G
Sbjct: 264 AVEWQFYIGGVFDIPCNPNSLDHGILIVGYSAKN--TIFRKNMPYWIVKNSWGADWGEQG 321

Query: 342 YYKICMGRNVCGVDSMVSS 360
           Y  +  G+N CGV + VS+
Sbjct: 322 YIYLRRGKNTCGVSNFVST 340


>gi|290984408|ref|XP_002674919.1| predicted protein [Naegleria gruberi]
 gi|284088512|gb|EFC42175.1| predicted protein [Naegleria gruberi]
          Length = 353

 Score =  285 bits (730), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 143/320 (44%), Positives = 208/320 (65%), Gaps = 17/320 (5%)

Query: 52  HFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRR 111
           HF  F  KF + Y   EE++YR +VF+ N+  ++R  + +    +G+TKFSDLT  EFR+
Sbjct: 36  HFLDFTRKFQRFYKGPEEYEYRLKVFRENIETSRRMNIREGNNNYGITKFSDLTSDEFRK 95

Query: 112 QFLGLNRRLRLPADAQKAPILPTNDL---------PTDFDWRDHGAVTGVKDQGACGSCW 162
            +L      + P + QK   + +N +         P  +DWR+HGA+TGVKDQG CGSCW
Sbjct: 96  FYL---MEKKTPKEIQKMMRMDSNKMVSNSYAKPAPDHYDWRNHGAITGVKDQGQCGSCW 152

Query: 163 SFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDP-EESGSCDSGCNGGLMNSAFEYIL 221
           +FSA G++EG++ +   +LVS SEQQLVDCD+ C   E   SCD GCNGGL  SA++Y++
Sbjct: 153 AFSAIGSIEGSYAIKHKQLVSFSEQQLVDCDNNCVTFENQQSCDDGCNGGLQWSAYQYLM 212

Query: 222 KAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGIN 281
           KAGGV  EKDYPY   +   C+   +   A +SN++++S++E +MA  L ++GP+AV +N
Sbjct: 213 KAGGVVTEKDYPYYA-ERYKCEVKPANFVAKLSNWTMLSTNETEMANWLAENGPIAVALN 271

Query: 282 AVWMQTYIGGVSCPYICG-KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGEN 340
           A ++Q Y  G++ P  C    LDHGVLIVGYG   F     K +PYWI+KNSWG ++GE+
Sbjct: 272 ADFLQNYNNGIADPAWCDPTQLDHGVLIVGYGLETF--WFGKPQPYWIVKNSWGYDFGED 329

Query: 341 GYYKICMGRNVCGVDSMVSS 360
           GY++I  G   CG++++ S+
Sbjct: 330 GYFRIVKGVGRCGINTVPSA 349


>gi|281209544|gb|EFA83712.1| cysteine proteinase 1 [Polysphondylium pallidum PN500]
          Length = 465

 Score =  284 bits (726), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 154/309 (49%), Positives = 193/309 (62%), Gaps = 13/309 (4%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLR---RAKRRQLLDPTAVH-GVTKFSDLT 105
           E  F  F+ K++K Y T  E+  RF  FK+NL+      R      ++V  GV +F+DL+
Sbjct: 25  ETQFRQFQIKYNKQY-TSSEYAERFATFKSNLKVIDEKNRDAASRKSSVRFGVNEFADLS 83

Query: 106 PSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFS 165
            SEFR  +L   + +R P +A  A  LP  DLPT FDWR  GAVTGVK+QG CGSCWSFS
Sbjct: 84  QSEFRATYLNSVQAVRDP-NAAVAADLPVEDLPTAFDWRTKGAVTGVKNQGQCGSCWSFS 142

Query: 166 ATGALEGAHFLSTGELVSLSEQQLVDCDHEC-DPEESGSCDSGCNGGLMNSAFEYILKAG 224
            TG +EG  FL+   L  LSEQ LVDCDHEC +      CD GCNGGL  +A+ YI+K G
Sbjct: 143 TTGNVEGQWFLAGNTLTGLSEQNLVDCDHECMEYLGDNVCDQGCNGGLQPNAYTYIIKNG 202

Query: 225 GVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW 284
           G++ E  YPY G D G+C F  + I A +SN++ +SS+E QMAA LV +GPLA+  +AV 
Sbjct: 203 GIDTEASYPYQGVD-GTCSFKAANIGAKISNWTYVSSNETQMAAYLVANGPLAIAADAVE 261

Query: 285 MQTYIGGV-SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYY 343
            Q Y+GGV   P  CG  LDHG+LIVGY +     I  K+K YWI+KNSWG  WGE GY 
Sbjct: 262 WQFYLGGVFDVP--CGNTLDHGILIVGYSAEN--TIFHKDKAYWIVKNSWGATWGEQGYI 317

Query: 344 KICMGRNVC 352
            I  G   C
Sbjct: 318 YISRGNGEC 326


>gi|244790097|ref|NP_001156454.1| cathepsin F isoform 2 precursor [Acyrthosiphon pisum]
          Length = 586

 Score =  284 bits (726), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 148/322 (45%), Positives = 199/322 (61%), Gaps = 15/322 (4%)

Query: 44  DHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFS 102
           D  L  +  F  F    +K Y + EE   RFR+F AN+++ K  Q  +  +A++G T+F+
Sbjct: 271 DDRLQLKTDFENFIMTHNKIYTSLEEKSRRFRIFAANMKKVKLLQNHEQGSAIYGATQFA 330

Query: 103 DLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCW 162
           DLT +EF++++LGL+  +        A I  +  +P +FDWR+H  VT VK+QGACGSCW
Sbjct: 331 DLTKNEFKKKYLGLDSSMTSKKTLPMAVIPQSASIPNEFDWRNHNVVTPVKNQGACGSCW 390

Query: 163 SFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK 222
           +FSA   +EG + L + EL+SLSEQ+L+DCD+          D+GC GGLM  AFE +  
Sbjct: 391 AFSAIANIEGQYALKSKELLSLSEQELIDCDN---------LDNGCGGGLMTQAFEAVEN 441

Query: 223 AGGVEREKDYPYTG-TDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGIN 281
            GG+E E DYPY G  D   C+  KS +  ++S    +S+DE+ +A  LVKHGPL+VG+N
Sbjct: 442 LGGLETESDYPYEGHADRKGCQLKKSDVKVSISKAVNVSTDEEDIAKFLVKHGPLSVGVN 501

Query: 282 AVWMQTYIGGVSCPY--ICG-KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWG 338
           A  MQ Y+GGVS P   +C  K LDHGV IVGYG         K  PYW+IKNSWG  WG
Sbjct: 502 ANAMQFYMGGVSHPIHALCSPKSLDHGVAIVGYGVHR-TKYTHKNLPYWLIKNSWGPGWG 560

Query: 339 ENGYYKICMGRNVCGVDSMVSS 360
           E GYY +  G   CGV+ MVSS
Sbjct: 561 EKGYYLLYRGDGSCGVNQMVSS 582


>gi|118483347|gb|ABK93575.1| unknown [Populus trichocarpa]
          Length = 157

 Score =  283 bits (723), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 127/156 (81%), Positives = 146/156 (93%)

Query: 213 MNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVK 272
           MN+AFEY LKAGG+EREKDYPYTG D G+CKF+KSK+AA+VSNFSV+S DEDQ+AANLVK
Sbjct: 1   MNNAFEYALKAGGLEREKDYPYTGNDRGACKFEKSKVAASVSNFSVVSLDEDQIAANLVK 60

Query: 273 HGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNS 332
           HGPL+V INAV+MQTYIGGVSCPYIC K+ DHGVL+VGYG++G+APIRFKEKP+WIIKNS
Sbjct: 61  HGPLSVAINAVFMQTYIGGVSCPYICSKHQDHGVLLVGYGAAGYAPIRFKEKPFWIIKNS 120

Query: 333 WGENWGENGYYKICMGRNVCGVDSMVSSVAAIHTTS 368
           WGENWGENGYYKIC  RN+CGVDSMVS+VAAIH T+
Sbjct: 121 WGENWGENGYYKICRARNICGVDSMVSTVAAIHATA 156


>gi|330792958|ref|XP_003284553.1| hypothetical protein DICPUDRAFT_96752 [Dictyostelium purpureum]
 gi|325085467|gb|EGC38873.1| hypothetical protein DICPUDRAFT_96752 [Dictyostelium purpureum]
          Length = 346

 Score =  282 bits (722), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 149/321 (46%), Positives = 202/321 (62%), Gaps = 17/321 (5%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANL----RRAKRRQLLDPTAVHGVTKFSDLT 105
           +  F  F+ K++K Y++ E +  +F  FKANL    +  ++ +L       GV +F+DL+
Sbjct: 26  QTQFVAFQQKYNKVYSSNE-YSAKFETFKANLGVIAQLNQKAKLHKSDTKFGVNEFADLS 84

Query: 106 PSEFRRQFLGLNRRLRLP-ADAQKAPILPTNDL---PTDFDWRDHGAVTGVKDQGACGSC 161
            +EFR+ +L  N ++  P A    AP+L    L   PT FDWR  GAVTGVK+QG CGSC
Sbjct: 85  AAEFRKYYL--NAQVAKPDASLPMAPLLTEEVLETIPTAFDWRTKGAVTGVKNQGQCGSC 142

Query: 162 WSFSATGALEGAHFLSTGELVSLSEQQLVDCDHEC-DPEESGSCDSGCNGGLMNSAFEYI 220
           WSFS TG +EG  +L+   LV LSEQ LVDCDH+C + +   SCD+GC+GGL  +A+ Y+
Sbjct: 143 WSFSTTGNIEGQWYLAGNTLVGLSEQNLVDCDHQCMEYDGQKSCDAGCDGGLQPNAYRYV 202

Query: 221 LKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGI 280
           ++ GG++ E  YPY    G SCKF    +AA +SNF++I  +E QMA  L  HGPLA+  
Sbjct: 203 IENGGLDSENSYPYLAVTGDSCKFKSGNVAAKISNFTMIPQNETQMAGYLATHGPLAIAA 262

Query: 281 NAVWMQTYIGGV-SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGE 339
           +A   Q YIGGV   P  CG+ LDHG+LIVG+  S    I    KPYWI+KNSWG +WGE
Sbjct: 263 DAAEWQFYIGGVFDLP--CGQSLDHGILIVGF--SAEKNIFGHLKPYWIVKNSWGASWGE 318

Query: 340 NGYYKICMGRNVCGVDSMVSS 360
            GY  +  G+N+CGV   VS+
Sbjct: 319 QGYLYLGKGKNLCGVSDFVST 339


>gi|244790093|ref|NP_001156453.1| cathepsin F isoform 1 precursor [Acyrthosiphon pisum]
          Length = 586

 Score =  282 bits (721), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 146/322 (45%), Positives = 199/322 (61%), Gaps = 15/322 (4%)

Query: 44  DHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFS 102
           D  L  +  F  F    +K Y + EE   RFR+F AN+++ K  Q  +  +A++G T+F+
Sbjct: 271 DDRLQLKTDFENFIMTHNKIYTSLEEKSRRFRIFAANMKKVKLLQNHEQGSAIYGATQFA 330

Query: 103 DLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCW 162
           DLT +EF++++LGL+  +        A I  +  +P +FDWR+H  VT VK+QGACGSCW
Sbjct: 331 DLTKNEFKKKYLGLDSSMTSKKTLPMAVIPQSASIPNEFDWRNHNVVTPVKNQGACGSCW 390

Query: 163 SFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK 222
           +FSA   +EG + L + EL+SLSEQ+L+DCD+          D+GC GGLM  AFE +  
Sbjct: 391 AFSAIANIEGQYALKSKELLSLSEQELIDCDN---------LDNGCGGGLMTQAFEAVEN 441

Query: 223 AGGVEREKDYPYTG-TDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGIN 281
            GG+E E DYPY G  D   C+  KS +  ++S    +S+DE+ +A  LVKHGPL+VG+N
Sbjct: 442 LGGLETESDYPYEGHADRKGCQLKKSDVKVSISKAVNVSTDEEDIAKFLVKHGPLSVGVN 501

Query: 282 AVWMQTYIGGVSCPY--ICG-KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWG 338
           A  MQ Y+GGVS P   +C  K LDHGV IVGYG   + P      P+W IKNSWG+ WG
Sbjct: 502 ANAMQFYMGGVSHPIHALCSPKSLDHGVAIVGYGVHKY-PYLNATLPFWTIKNSWGDKWG 560

Query: 339 ENGYYKICMGRNVCGVDSMVSS 360
             GYY +  G   CGV+ MVSS
Sbjct: 561 MQGYYLLYRGDGSCGVNQMVSS 582


>gi|307175778|gb|EFN65613.1| Putative cysteine proteinase CG12163 [Camponotus floridanus]
          Length = 887

 Score =  281 bits (720), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 145/328 (44%), Positives = 205/328 (62%), Gaps = 26/328 (7%)

Query: 47  LNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANL------RRAKRRQLLDPTAVHGVTK 100
           + +E  F+ F   +++TY+T EE + R R+F+ NL      R+ +R      TA + V  
Sbjct: 576 VRSEQLFNNFVVTYNRTYSTPEERNLRLRIFRENLGIIQLLRKTERG-----TAHYDVNM 630

Query: 101 FSDLTPSEFRRQFLGLNRRLRLPADAQ-KAPILPTNDLPTDFDWRDHGAVTGVKDQGACG 159
           F+D++P EFR ++LGL   LR   D   +   +P  +LP  FDWR+   VT VKDQG CG
Sbjct: 631 FADMSPEEFRSRYLGLRPDLRSENDIPLREAEIPDVELPPKFDWREKSVVTPVKDQGMCG 690

Query: 160 SCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEY 219
           SCW+FS TG +EG + +  G L+SLSEQ+LVDCD           D GCNGGL ++A+  
Sbjct: 691 SCWAFSVTGNIEGQYAIKHGRLLSLSEQELVDCD---------DLDEGCNGGLPDNAYRA 741

Query: 220 ILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVG 279
           I K GG+E E DYPY   +   C F K+     +++   I+S+E QMA  LV++GP+++G
Sbjct: 742 IEKLGGLELESDYPYEA-ENEKCHFKKNLAKVQLASAVNITSNETQMAQWLVQNGPISIG 800

Query: 280 INAVWMQTYIGGVSCP--YICG-KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGEN 336
           INA  MQ Y+GGVS P  ++C  K LDHGVLIVGYG+S + P+  K+ PYW IKNSWG+ 
Sbjct: 801 INANAMQFYVGGVSHPFKFLCNPKNLDHGVLIVGYGTSDY-PLFHKKLPYWTIKNSWGKR 859

Query: 337 WGENGYYKICMGRNVCGVDSMVSSVAAI 364
           WGE GYY++  G   CG++++ +S   +
Sbjct: 860 WGEQGYYRVYRGDGTCGLNTLATSAVVV 887


>gi|144228217|gb|ABO93617.1| papain-like cysteine proteinase [Vitis vinifera]
          Length = 161

 Score =  280 bits (716), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 128/161 (79%), Positives = 147/161 (91%)

Query: 188 QLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKS 247
           QLVDCDHECDPEE G+CD GCNGGLM SAFEYILKAGGVERE+ YPY G+D GSCKF+KS
Sbjct: 1   QLVDCDHECDPEEYGACDQGCNGGLMTSAFEYILKAGGVEREETYPYIGSDRGSCKFNKS 60

Query: 248 KIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVL 307
           +I A+VSNFSV+S DEDQ+AAN+VK+GPLAVGINAV+MQTY+ GVSCPYIC + LDHGV+
Sbjct: 61  QIVASVSNFSVVSLDEDQIAANMVKNGPLAVGINAVFMQTYMKGVSCPYICSRNLDHGVV 120

Query: 308 IVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMG 348
           +VGYGS+G+APIRFKEKPYWIIKNSWGE+WGE+GY K C G
Sbjct: 121 LVGYGSAGYAPIRFKEKPYWIIKNSWGESWGEDGYDKNCRG 161


>gi|427777627|gb|JAA54265.1| Putative cathepsin f-like cysteine protease [Rhipicephalus
           pulchellus]
          Length = 475

 Score =  280 bits (715), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 152/317 (47%), Positives = 208/317 (65%), Gaps = 17/317 (5%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRR-AKRRQLLDPTAVHGVTKFSDLTPSEFRR 111
           FS+F   ++KTY  +EEH+ RF +FK NL+R A   +L + TA +G+T+FSDL+PSEF R
Sbjct: 166 FSVFARTYNKTYKDKEEHEARFMIFKNNLKRIALFNRLEEGTAHYGLTEFSDLSPSEFER 225

Query: 112 QFLGLNRRL-RLPADAQKAPILPTND-LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGA 169
            +LGL + L    A+ +   + P N+ LP  FDWR  GAVT VK+QG CGSCW+FS TG 
Sbjct: 226 HYLGLKKDLAEHKAEVKPIKVGPVNEPLPDLFDWRTKGAVTEVKNQGMCGSCWAFSVTGN 285

Query: 170 LEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVERE 229
           +EG  FLS  +L+SLSEQ+LVDCDH          D GC GG M  A + +++ GG+E E
Sbjct: 286 VEGQWFLSRSKLLSLSEQELVDCDH---------GDHGCKGGYMGQAMKAVIEMGGLETE 336

Query: 230 KDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYI 289
            +YPY G D G+C+F+K++  A V +F  +  +E ++A  L+KHGP+++GINA  MQ Y 
Sbjct: 337 SEYPYKGVD-GTCEFNKTESKARVQSFVGLPQNETELAYWLMKHGPVSIGINANAMQFYF 395

Query: 290 GGVSCP--YICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKIC 346
           GG+S P  ++C    LDHGVL+VG+G    +  R K  PYWI+KNSWG+ WGE GYY++ 
Sbjct: 396 GGISHPWKFLCSPTDLDHGVLLVGFGVDKRS-FRRKPVPYWIVKNSWGKYWGEKGYYRVY 454

Query: 347 MGRNVCGVDSMVSSVAA 363
            G   CGV+ M  S   
Sbjct: 455 RGDGTCGVNQMALSAVV 471


>gi|332026794|gb|EGI66903.1| Putative cysteine proteinase [Acromyrmex echinatior]
          Length = 774

 Score =  278 bits (712), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 145/331 (43%), Positives = 212/331 (64%), Gaps = 25/331 (7%)

Query: 42  SEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKR-RQLLDPTAVHGVTK 100
           SED  + AE  F+ F + +++TY++ E  + RF++F+ NL   +  R+    T ++GV  
Sbjct: 461 SED--MKAERLFNNFMTTYNRTYSSLE-RNLRFKIFRENLNFIEELRETEQGTGIYGVNM 517

Query: 101 FSDLTPSEFRRQFLGLNRRLRLPADAQKAPI----LPTNDLPTDFDWRDHGAVTGVKDQG 156
           F+D++  EFR ++LGL   L+      + P+    +P  DLP+ FDWR  G VT VK+QG
Sbjct: 518 FADMSQKEFRTRYLGLRPDLQ---SENEIPLPKAEIPDIDLPSSFDWRQKGVVTPVKNQG 574

Query: 157 ACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSA 216
            CGSCW+FS TG +EG + +  G+L+SLSEQ+LVDCDH          D GCNGGL ++A
Sbjct: 575 QCGSCWAFSVTGNVEGQYAIKHGQLLSLSEQELVDCDH---------LDEGCNGGLPDNA 625

Query: 217 FEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPL 276
           +  I + GG+E E DYPY   +   C F ++ +   +++   I+S+E Q+A  LV++GP+
Sbjct: 626 YRAIEQLGGLELESDYPYEA-ENEKCHFKQNLVKVELASAVNITSNETQIAQWLVQNGPI 684

Query: 277 AVGINAVWMQTYIGGVSCPY--ICG-KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSW 333
           A+GINA  MQ Y+GGVS P   +C    L+HGVLIVGYG+S + P+  K  PYWIIKNSW
Sbjct: 685 AIGINANAMQFYMGGVSHPLKILCNPNNLNHGVLIVGYGTSRY-PLFHKNLPYWIIKNSW 743

Query: 334 GENWGENGYYKICMGRNVCGVDSMVSSVAAI 364
           G++WGE GYY++  G   CG+++M SS   +
Sbjct: 744 GKSWGEQGYYRVYRGDGTCGLNTMASSAVVV 774


>gi|401758208|gb|AFQ01139.1| cathepsin F-like protease, partial [Chilo suppressalis]
          Length = 537

 Score =  276 bits (706), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 149/326 (45%), Positives = 200/326 (61%), Gaps = 18/326 (5%)

Query: 45  HLLNAEHHFSLFKSKFSKTYATQE-EHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFS 102
           H + AE  F  F + +   Y     E   RF +FK N+++       +  T V+ VT+F+
Sbjct: 223 HHVQAEQLFFNFITTYKPEYINDHVEMTKRFEIFKENVKKIHELNTHERGTGVYAVTRFT 282

Query: 103 DLTPSEFRRQFLGLNRRLRLPAD--AQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGS 160
           DLT  EF+ ++LGLN  L+ P     ++A I   + LP  FDWR  GAVT VKDQGACGS
Sbjct: 283 DLTYEEFKSKYLGLNPNLKKPNQIPMRQAEIPKVHQLPASFDWRPLGAVTEVKDQGACGS 342

Query: 161 CWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYI 220
           CW+FS TG +EG   L TG+L+SLSEQ+LVDCD           D GC+GG M++A+  I
Sbjct: 343 CWAFSVTGNIEGQWKLKTGKLLSLSEQELVDCD---------KMDDGCDGGYMDNAYRAI 393

Query: 221 LKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGI 280
            + GG+E E++YPY   D   C F+KS     +S    ISS+E  MA  LV +GP+++GI
Sbjct: 394 EQLGGLETEEEYPYEAED-DKCSFNKSLSKVQISGAVNISSNETNMAKWLVHNGPISIGI 452

Query: 281 NAVWMQTYIGGVSCPY--ICG-KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENW 337
           NA  MQ Y+GGVS P+  +C  K +DHGVLIVGYG   + P+  K+ PYW++KNSWG  W
Sbjct: 453 NANAMQFYVGGVSHPWKALCNPKNIDHGVLIVGYGIKEY-PLFNKQLPYWVVKNSWGPGW 511

Query: 338 GENGYYKICMGRNVCGVDSMVSSVAA 363
           GE GYY++  G   CGV++M SS   
Sbjct: 512 GEQGYYRVFRGDGTCGVNTMASSAVV 537


>gi|307200028|gb|EFN80374.1| Putative cysteine proteinase CG12163 [Harpegnathos saltator]
          Length = 1032

 Score =  276 bits (705), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 143/323 (44%), Positives = 202/323 (62%), Gaps = 16/323 (4%)

Query: 47   LNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKR-RQLLDPTAVHGVTKFSDLT 105
            + +E  F  F + +++TYAT+EE + R  +F+ NL   +  R+    T  +GV +F+D++
Sbjct: 721  MRSERLFENFVNTYNRTYATEEERNLRLSIFRENLGIIRLLRKNEQGTGQYGVNQFADVS 780

Query: 106  PSEFRRQFLGLNRRLRLPADAQ-KAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSF 164
              EF   +LGL   LR   +   +   +P  +LP  FDWR  GAVT VK+QG CGSCW+F
Sbjct: 781  TEEFHAFYLGLRPDLRTENNIPLRQAEIPDIELPNSFDWRQKGAVTPVKNQGMCGSCWAF 840

Query: 165  SATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAG 224
            S TG +EG + +   +L+SLSEQ+LVDCD           D GCNGGL ++A+  I K G
Sbjct: 841  SVTGNVEGQYAIKHNKLLSLSEQELVDCD---------DLDEGCNGGLPDNAYRAIEKLG 891

Query: 225  GVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW 284
            G+E E DYPY   +   C F K+     V +   I+S+E Q+A  LV +GP+++GINA  
Sbjct: 892  GLELESDYPYEA-ENERCHFKKNMAKVQVGSAVNITSNETQIAQWLVANGPISIGINANA 950

Query: 285  MQTYIGGVSCP--YICG-KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENG 341
            MQ Y+GGVS P  ++C  K LDHGVLIVGYG+S + P+  K+ PYWI+KNSWG+ WGE G
Sbjct: 951  MQFYMGGVSHPFKFLCNPKNLDHGVLIVGYGTSNY-PLFHKKLPYWIVKNSWGDRWGEQG 1009

Query: 342  YYKICMGRNVCGVDSMVSSVAAI 364
            YY++  G   CG+++M SS   +
Sbjct: 1010 YYRVYRGDGTCGLNTMASSAVVV 1032


>gi|390994427|gb|AFM37363.1| cathepsin F1 [Dictyocaulus viviparus]
          Length = 459

 Score =  275 bits (702), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 149/328 (45%), Positives = 200/328 (60%), Gaps = 33/328 (10%)

Query: 49  AEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTPS 107
           A + F  F  +  K Y ++ +   RFRVFK NL+  +  Q  +  TAV+G+T+FSDLTP 
Sbjct: 153 AWNQFVDFMGRHEKVYNSKHDTLKRFRVFKRNLKAIRSWQEKEEGTAVYGITQFSDLTPE 212

Query: 108 EFRRQFLGL--------NRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACG 159
           EF++ +L          NR + L A+     +     LP  FDWRDHGAVT VK+QG CG
Sbjct: 213 EFKKIYLPYIWDEPIVPNRMVDLTAEG----VHLNETLPESFDWRDHGAVTDVKNQGFCG 268

Query: 160 SCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEY 219
           SCW+FS TG +EG  FL+  +LVSLSEQ+LVDCD           D GC GGL + A++ 
Sbjct: 269 SCWAFSTTGNIEGQWFLAKKKLVSLSEQELVDCD---------KVDDGCEGGLPSQAYKE 319

Query: 220 ILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVG 279
           I++ GG+E E  YPY G  G  C  ++++ A  +++   +  DE+ M A LVK GP+++G
Sbjct: 320 IMRMGGLETESAYPYDGR-GEECHINRTEFAVYINDSVELPHDEESMKAWLVKKGPISIG 378

Query: 280 INAVWMQTYIGGVSCP--YICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGEN 336
           INA  +Q Y  G+S P  + C  Y L+HGVL+VGYGS        K KPYWIIKNSWG  
Sbjct: 379 INANPLQFYRHGISHPWKFFCEPYMLNHGVLLVGYGSE-------KNKPYWIIKNSWGPK 431

Query: 337 WGENGYYKICMGRNVCGVDSMVSSVAAI 364
           WGENGYY++  G+NVCGV  M +S   +
Sbjct: 432 WGENGYYRLYRGKNVCGVHEMPTSAVVL 459


>gi|380025691|ref|XP_003696602.1| PREDICTED: putative cysteine proteinase CG12163-like [Apis florea]
          Length = 881

 Score =  274 bits (701), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 155/319 (48%), Positives = 204/319 (63%), Gaps = 16/319 (5%)

Query: 47  LNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLT 105
           +  E  F  F  KF+KT+++  E   RF++FK NL+  K  Q  +  TA +GVT F+DLT
Sbjct: 570 IKYETLFEDFIIKFNKTFSSTNEKQNRFQIFKQNLKIIKELQTFEQGTAEYGVTMFADLT 629

Query: 106 PSEFRRQFLGLNRRLRLPADAQKAPILPTND-LPTDFDWRDHGAVTGVKDQGACGSCWSF 164
           P EF+ ++LG    L+   +   A I  ++  LP  FDWRD+ AVT VKDQG CGSCW+F
Sbjct: 630 PKEFKTRYLGFRPELKQENEIPLAKIEVSDIFLPPKFDWRDYNAVTPVKDQGLCGSCWAF 689

Query: 165 SATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAG 224
           S TG +EG + +   +L+SLSEQ+L+DCD         + D GCNGG M +A++ I K G
Sbjct: 690 SVTGNVEGQYAIKYKKLLSLSEQELLDCD---------TLDEGCNGGYMENAYKAIEKLG 740

Query: 225 GVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW 284
           G+E E DYPY G +   C F K      V     I+S+E +MA  L+K+GP+++GINA  
Sbjct: 741 GLELESDYPYDGRN-EKCHFFKKNAKVQVVGAVNITSNETKMAQWLIKNGPISIGINANA 799

Query: 285 MQTYIGGVSCP--YICG-KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENG 341
           MQ YIGGVS P  ++C  K LDHGVLIVGYG S + P+  KE PYWIIKNSWG  WGENG
Sbjct: 800 MQFYIGGVSHPFHFLCNPKDLDHGVLIVGYGISKY-PLFHKELPYWIIKNSWGSRWGENG 858

Query: 342 YYKICMGRNVCGVDSMVSS 360
           YY++  G   CGV++M SS
Sbjct: 859 YYRVYRGDGTCGVNAMASS 877


>gi|66803062|ref|XP_635374.1| cysteine protease [Dictyostelium discoideum AX4]
 gi|60463697|gb|EAL61879.1| cysteine protease [Dictyostelium discoideum AX4]
          Length = 352

 Score =  274 bits (701), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 148/331 (44%), Positives = 205/331 (61%), Gaps = 29/331 (8%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRA----KRRQLLDPTAVHGVTKFSDLT 105
           E  F  F++K++K Y+  EE+  +F  FK+NL       K+   +      GV KF+DL+
Sbjct: 24  ESQFIAFQNKYNKIYSA-EEYLVKFETFKSNLLNIDALNKQATTIGSDTKFGVNKFADLS 82

Query: 106 PSEFRRQFLGLNRRLRLPADAQKAPILP--TNDL----PTDFDWRDHGA---------VT 150
             EF++ +L  ++  RL  D    P+LP  ++D+    P  FDWR+ G          VT
Sbjct: 83  KEEFKKYYLS-SKEARLTDDL---PMLPNLSDDIISATPAAFDWRNTGGSTKFPQGTPVT 138

Query: 151 GVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHEC-DPEESGSCDSGCN 209
            VK+QG CGSCWSFS TG +EG H+LSTG LV LSEQ LVDCDH C   E    C++GC+
Sbjct: 139 AVKNQGQCGSCWSFSTTGNVEGQHYLSTGTLVGLSEQNLVDCDHTCMTYENENVCNAGCD 198

Query: 210 GGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAAN 269
           GGL  +A+ YI+K GG++ E  YPYT  D G CKF+ +++ A +S+F+++  +E Q+A+ 
Sbjct: 199 GGLQPNAYNYIIKNGGIQTEATYPYTAVD-GECKFNSAQVGAKISSFTMVPQNETQIASY 257

Query: 270 LVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWII 329
           L  +GPLA+  +A   Q Y+GGV   + CG+ LDHG+LIVGYG+     I  K  PYWII
Sbjct: 258 LFNNGPLAIAADAEEWQFYMGGV-FDFPCGQTLDHGILIVGYGAQD--TIVGKNTPYWII 314

Query: 330 KNSWGENWGENGYYKICMGRNVCGVDSMVSS 360
           KNSWG +WGE GY K+    + CGV + VSS
Sbjct: 315 KNSWGADWGEAGYLKVERNTDKCGVANFVSS 345


>gi|313235882|emb|CBY11269.1| unnamed protein product [Oikopleura dioica]
          Length = 371

 Score =  274 bits (701), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 166/382 (43%), Positives = 225/382 (58%), Gaps = 39/382 (10%)

Query: 9   LLLLLLSSVLASAVAVNDDD------AMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSK 62
           L  +L  S LA       D       +   +  P D + SED   +A   F  F  +  K
Sbjct: 3   LFSILAGSALAGVAEFLQDSYDHSKLSEFFKTTPEDFDVSED---DARKQFENFLLEHPK 59

Query: 63  TYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTPSEFRRQFLGLNRRLR 121
            Y+ QE H  RF+ F  NL+R K    ++  +A +GVT+F+DL+  EFRR +LGL   L+
Sbjct: 60  MYSEQESHS-RFQTFWENLKRIKFHNHIEQGSAKYGVTEFADLSDFEFRRHYLGLKPELK 118

Query: 122 LPA----------DAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALE 171
           +P            ++K     T D    FDW + GAVT VK+QG CGSCW+FS TG +E
Sbjct: 119 IPNRKKYERKSRNSSKKLKFAKTVD--ETFDWVEKGAVTEVKNQGMCGSCWAFSTTGNIE 176

Query: 172 GAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKD 231
           GA F +TG+LVSLSEQ+LVDCD +         DSGCNGGLM+ AFE +++ GG+E E+ 
Sbjct: 177 GAWFKATGDLVSLSEQELVDCDQK---------DSGCNGGLMDQAFEEVIRIGGLETEQQ 227

Query: 232 YPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGG 291
           YPY G    +C F+KS     + +F  I  DE+++A  L +HGPL++ INA  MQ Y GG
Sbjct: 228 YPYDGVQ-ETCNFEKSLSKVQIDDFMDIGEDEEEIAEALEEHGPLSIAINAFGMQFYRGG 286

Query: 292 VSCP--YICGKY-LDHGVLIVGYGSSGFAPIRFKE-KPYWIIKNSWGENWGENGYYKICM 347
           +S P  ++C +  LDHGVL+VGYG       R +  +PYW IKNSWG  WGE+GYY++  
Sbjct: 287 ISHPLSFLCSQDGLDHGVLMVGYGVEHHTTWRHRHPRPYWKIKNSWGPRWGEDGYYRVAR 346

Query: 348 GRNVCGVDSMVSS--VAAIHTT 367
           G+ VCGV+ MVS+  V A +TT
Sbjct: 347 GKGVCGVNKMVSTSIVNAQNTT 368


>gi|118488886|gb|ABK96252.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 156

 Score =  273 bits (699), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 123/156 (78%), Positives = 144/156 (92%)

Query: 213 MNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVK 272
           MNSAFEY LKAGG+ RE+DYPYTGTD G+CKFDK+K+AA V+NFSV+S DEDQ+AANLVK
Sbjct: 1   MNSAFEYTLKAGGLMREEDYPYTGTDRGACKFDKNKVAARVANFSVVSLDEDQIAANLVK 60

Query: 273 HGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNS 332
           +GPLAV INAV+MQTYIGGVSCPYIC + LDHGVL+VGYGS+G++P+R KEKP+WIIKNS
Sbjct: 61  NGPLAVAINAVFMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYSPVRMKEKPFWIIKNS 120

Query: 333 WGENWGENGYYKICMGRNVCGVDSMVSSVAAIHTTS 368
           WGE WGENG+YKIC GRNVCGVDSMVS+VAA+ T+S
Sbjct: 121 WGEKWGENGFYKICRGRNVCGVDSMVSTVAAVQTSS 156


>gi|222637029|gb|EEE67161.1| hypothetical protein OsJ_24244 [Oryza sativa Japonica Group]
          Length = 309

 Score =  273 bits (697), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 149/282 (52%), Positives = 187/282 (66%), Gaps = 19/282 (6%)

Query: 31  IRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLL 90
           IRQV  +DG      LL  E  F+ F  +  + Y+  EE+  R RVF ANL RA   Q L
Sbjct: 29  IRQV--TDGGYWPPGLL-PEAQFAAFVRRHGREYSGPEEYARRLRVFAANLARAAAHQAL 85

Query: 91  DPTAVHGVTKFSDLTPSEFRRQFLGLN-------RRLRLPADAQKAPILPTNDLPTDFDW 143
           DPTA HGVT FSDLT  EF  +  GL        RR  +P+ A  A     + LP  FDW
Sbjct: 86  DPTARHGVTPFSDLTREEFEARLTGLAADVGDDVRRRPMPS-AAPATEEEVSGLPASFDW 144

Query: 144 RDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGS 203
           RD GAVT VK QGACGSCW+FS TGA+EGA+FL+TG L+ LSEQQLVDCDH CD E+   
Sbjct: 145 RDRGAVTDVKMQGACGSCWAFSTTGAVEGANFLATGNLLDLSEQQLVDCDHTCDAEKKTE 204

Query: 204 CDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVIS--- 260
           CDSGC GGLM +A+ Y++ +GG+  +  YPYTG   G+C+FD +++A  V+NF+V++   
Sbjct: 205 CDSGCGGGLMTNAYAYLMSSGGLMEQSAYPYTGAQ-GTCRFDANRVAVRVANFTVVAPPG 263

Query: 261 -SDED---QMAANLVKHGPLAVGINAVWMQTYIGGVSCPYIC 298
            +D D   QM A LV+HGPLAVG+NA +MQTY+GGVSCP +C
Sbjct: 264 GNDGDGDAQMRAALVRHGPLAVGLNAAYMQTYVGGVSCPLVC 305


>gi|289740839|gb|ADD19167.1| cysteine proteinase cathepsin F [Glossina morsitans morsitans]
          Length = 471

 Score =  272 bits (696), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 148/326 (45%), Positives = 200/326 (61%), Gaps = 17/326 (5%)

Query: 40  EQSEDHLLN-AEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHG 97
           ++S  H LN  EH F+ F+ KF + Y T  E   RFR+FK NL+  +     +  +A +G
Sbjct: 152 KKSNHHNLNKVEHLFAKFQIKFKRNYHTTMEKQMRFRIFKQNLQLIEELNRNEQGSAKYG 211

Query: 98  VTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGA 157
           +T+F+D+T  E++ Q  GL +R    A +     +P  DLP +FDWR+ GA++ VK+QG 
Sbjct: 212 ITEFADMTSPEYK-QRTGLWQRDPQKAASNPKAEIPNIDLPKEFDWREKGAISAVKNQGN 270

Query: 158 CGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAF 217
           CGSCW+FS TG +EG H + TG L   SEQ+L+DCD         + DS CNGGL ++A+
Sbjct: 271 CGSCWAFSVTGNIEGLHAVRTGVLEQYSEQELLDCD---------TSDSACNGGLPDNAY 321

Query: 218 EYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLA 277
           E I K GG+E E DYPY       C F+ +KI   V     +  +E  +A  L+ +GP++
Sbjct: 322 EAIEKIGGLELESDYPYHARK-DQCHFNSTKIHVKVKGHVDLPKNETAIAQWLIANGPIS 380

Query: 278 VGINAVWMQTYIGGVSCP--YICG-KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWG 334
           +GINA  MQ Y GGVS P   +C  K LDHGVLIVGYG S + P+  K  PYWI+KNSWG
Sbjct: 381 IGINANAMQFYRGGVSHPPHILCSRKNLDHGVLIVGYGVSDY-PMFKKTLPYWIVKNSWG 439

Query: 335 ENWGENGYYKICMGRNVCGVDSMVSS 360
           + WGE GYY++  G N CGV  M SS
Sbjct: 440 KKWGEQGYYRVYRGDNTCGVSEMSSS 465


>gi|213513816|ref|NP_001133678.1| Cathepsin F precursor [Salmo salar]
 gi|209154908|gb|ACI33686.1| Cathepsin F precursor [Salmo salar]
          Length = 475

 Score =  271 bits (693), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 146/325 (44%), Positives = 203/325 (62%), Gaps = 22/325 (6%)

Query: 40  EQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLD-PTAVHGV 98
           E++ED  +     F  F  ++++TY++QE+ D R R+F  NL+ A++ Q LD  TA +GV
Sbjct: 165 EETED-FVELLGQFKEFMVRYNRTYSSQEDTDRRLRIFHENLKTAEKLQSLDLGTAEYGV 223

Query: 99  TKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGAC 158
           TKFSDLT  EFR  +L      +    + K   +P    P  +DWR+HGAV+ VK+QG C
Sbjct: 224 TKFSDLTEEEFRTLYLNPLLSQQKLQRSMKPAAMPHGPAPPSWDWREHGAVSPVKNQGMC 283

Query: 159 GSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFE 218
           GSCW+FS TG +EG  F+ TG+LVSLSEQ+LVDCD         + D  C GGL ++A+E
Sbjct: 284 GSCWAFSVTGNIEGQWFVKTGKLVSLSEQELVDCD---------TADQACGGGLPSNAYE 334

Query: 219 YILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAV 278
            I K GGVE E DY YTG    SC F   K+ A +++   +S DE+++AA L ++GP++V
Sbjct: 335 AIEKLGGVETETDYSYTGKK-QSCDFTTDKVTAYINSSVELSKDENEIAAWLAENGPVSV 393

Query: 279 GINAVWMQTYIGGVSCPY--ICGKYL-DHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGE 335
            +NA  MQ Y  GVS P    C  ++ DH VL+VGYG         + KP+W IKNSWGE
Sbjct: 394 ALNAFAMQFYRKGVSHPLKIFCNPWMIDHAVLLVGYGER-------QGKPFWAIKNSWGE 446

Query: 336 NWGENGYYKICMGRNVCGVDSMVSS 360
           ++GE GYY +  G  +CG+++M SS
Sbjct: 447 DYGEQGYYYLYRGSRLCGINTMCSS 471


>gi|223648298|gb|ACN10907.1| Cathepsin F precursor [Salmo salar]
          Length = 474

 Score =  270 bits (691), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 144/313 (46%), Positives = 196/313 (62%), Gaps = 21/313 (6%)

Query: 52  HFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTPSEFR 110
            F  F  ++++TY++QEE D R RVF  NL+ A++ Q LD  TA +GVTKFSDLT  EFR
Sbjct: 175 QFKEFMVRYNRTYSSQEEADRRLRVFHENLKTAEKLQSLDQGTAEYGVTKFSDLTEEEFR 234

Query: 111 RQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGAL 170
             +L      +    + K   +P    P  +DWR+HGAV+ VK+QG CGSCW+FS TG +
Sbjct: 235 TLYLNPLLSQQNLQQSMKPAAMPRGPAPPSWDWREHGAVSPVKNQGMCGSCWAFSVTGNI 294

Query: 171 EGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREK 230
           EG  F  TG+LVSLSEQ+LVDCD         + D  C GGL ++A+E I K GG+E E 
Sbjct: 295 EGQWFAKTGKLVSLSEQELVDCD---------TVDQACGGGLPSNAYEAIEKLGGLETET 345

Query: 231 DYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIG 290
           DY YTG    SC F   K+ A +++   +S+DE+++AA L ++GP++V +NA  MQ Y  
Sbjct: 346 DYSYTGKK-QSCDFTTDKVIAYINSSVELSTDENEIAAWLAENGPVSVALNAFAMQFYRK 404

Query: 291 GVSCPY--ICGKYL-DHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICM 347
           GVS P    C  ++ DH VL+VGYG         + KP+W IKNSWGE++GE GYY +  
Sbjct: 405 GVSHPLKIFCNPWMIDHAVLLVGYGER-------QGKPFWAIKNSWGEDYGEQGYYYLYR 457

Query: 348 GRNVCGVDSMVSS 360
           G  +CG++ M SS
Sbjct: 458 GSRLCGINKMCSS 470


>gi|161408101|dbj|BAF94154.1| cathepsin F-like cysteine protease [Plautia stali]
          Length = 803

 Score =  270 bits (690), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 140/303 (46%), Positives = 193/303 (63%), Gaps = 15/303 (4%)

Query: 62  KTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTPSEFRRQFLGLNRRL 120
           ++Y T EE   RFR+F+AN+++A   Q  +  TA +GVT FSD++  EF++ +LGL +R 
Sbjct: 509 RSYKTTEELKKRFRIFRANMKKADYLQKTEQGTAKYGVTIFSDISSKEFKKHYLGLKKRT 568

Query: 121 RLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGE 180
                 Q+   +P   LP ++DWR++ AVT VK+QG CGSCW+FS TG +EG + + TG 
Sbjct: 569 PDIKFKQEMAQIPNITLPEEYDWRNYNAVTPVKNQGMCGSCWAFSVTGNIEGQYAIKTGN 628

Query: 181 LVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGG 240
           LVSLSEQ+LVDCD           D GC GGL  +A+  I + GG+E E DYPY+G D  
Sbjct: 629 LVSLSEQELVDCD---------KYDDGCEGGLFETAYHAIEELGGLELESDYPYSGRD-N 678

Query: 241 SCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCP--YIC 298
           +C F+ S++  ++++   IS+DE  MA  LV +GP+++GINA  MQ Y+GGVS P  ++C
Sbjct: 679 TCHFNSSEVRVSITSSVNISNDETDMAKWLVANGPISIGINANAMQFYLGGVSHPLKFLC 738

Query: 299 G-KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSM 357
             K LDHGVLIVGYG      +  +  PYW+IKNSW   WG  GYY +  G   CGV+  
Sbjct: 739 DPKTLDHGVLIVGYGIHR-TWLLHRHLPYWLIKNSWSSYWGAKGYYMLYRGDGSCGVNQW 797

Query: 358 VSS 360
            SS
Sbjct: 798 PSS 800


>gi|83944664|gb|ABC48936.1| cathepsin F like protease [Glossina morsitans morsitans]
          Length = 471

 Score =  270 bits (689), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 147/328 (44%), Positives = 199/328 (60%), Gaps = 17/328 (5%)

Query: 40  EQSEDHLLN-AEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHG 97
           ++S  H LN  EH F+ F+ KF + Y T  E   RFR+FK NL+  +     +  +A +G
Sbjct: 152 KKSNHHNLNKVEHLFAKFQIKFKRNYHTTMEKQMRFRIFKQNLQLIEELNRNEQGSAKYG 211

Query: 98  VTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGA 157
           +T+F+D+T  E++ Q  GL +R    A +     +P  DLP +FDWR+ GA++ VK+QG 
Sbjct: 212 ITEFADMTSPEYK-QRTGLWQRDPQKAASNPKAEIPNIDLPKEFDWREKGAISAVKNQGN 270

Query: 158 CGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAF 217
           CGSCW+FS TG +EG H + TG L   SEQ+L+DCD         + DS CNGGL ++A+
Sbjct: 271 CGSCWAFSVTGNIEGLHAVRTGVLEQYSEQELLDCD---------TSDSACNGGLPDNAY 321

Query: 218 EYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLA 277
           E I K GG+E E DYPY       C F+ +KI   V     +  +E  +A  L+ +GP++
Sbjct: 322 EAIEKIGGLELESDYPYHARK-DQCHFNSTKIHVKVKGHVDLPKNETAIAQWLIANGPIS 380

Query: 278 VGINAVWMQTYIGGVSCP--YICG-KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWG 334
           +GINA  MQ Y GGVS P   +C  K LDHGVLIVGY  S + P+  K  PYWI+KNSWG
Sbjct: 381 IGINANAMQFYRGGVSHPPHILCSRKNLDHGVLIVGYRVSDY-PMFKKTLPYWIVKNSWG 439

Query: 335 ENWGENGYYKICMGRNVCGVDSMVSSVA 362
           + WGE GYY++  G N CGV  M SS  
Sbjct: 440 KKWGEQGYYRVYRGDNTCGVSEMSSSAV 467


>gi|328788558|ref|XP_392381.3| PREDICTED: putative cysteine proteinase CG12163-like [Apis
           mellifera]
          Length = 881

 Score =  269 bits (688), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 152/316 (48%), Positives = 201/316 (63%), Gaps = 16/316 (5%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTPSE 108
           E  F  F  KF+KT+++  E   RF++FK NL+     Q  +  TA +GVT F+DLTP E
Sbjct: 573 EMLFEDFIIKFNKTFSSTNEKQNRFQIFKQNLKIINELQTFEQGTAEYGVTMFADLTPKE 632

Query: 109 FRRQFLGLNRRLRLPADAQKAPILPTND-LPTDFDWRDHGAVTGVKDQGACGSCWSFSAT 167
           F+ ++LG    L+   +   A I  ++  LP  FDWRD+  VT VKDQG CGSCW+FS T
Sbjct: 633 FKTRYLGFRPELKQENEIPLAKIEVSDIFLPLKFDWRDYNVVTPVKDQGLCGSCWAFSVT 692

Query: 168 GALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVE 227
           G +EG + +   +L+SLSEQ+L+DCD         + D GCNGG M +A++ I K GG+E
Sbjct: 693 GNVEGQYAIKYKKLLSLSEQELLDCD---------TLDEGCNGGYMENAYKAIEKLGGLE 743

Query: 228 REKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQT 287
            E DYPY G +   C F K      V     I+S+E +MA  L+K+GP+++GINA  MQ 
Sbjct: 744 LESDYPYDGRN-EKCHFFKKNAKVQVVGAVNITSNETKMAQWLIKNGPISIGINANAMQF 802

Query: 288 YIGGVSCP--YICG-KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYK 344
           YIGGVS P  ++C  K LDHGVLIVGYG S + P+  K+ PYWIIKNSWG  WGENGYY+
Sbjct: 803 YIGGVSHPFHFLCNPKDLDHGVLIVGYGISKY-PLFHKKLPYWIIKNSWGSRWGENGYYR 861

Query: 345 ICMGRNVCGVDSMVSS 360
           +  G   CGV++M SS
Sbjct: 862 VYRGDGTCGVNAMASS 877


>gi|302794759|ref|XP_002979143.1| hypothetical protein SELMODRAFT_110288 [Selaginella moellendorffii]
 gi|300152911|gb|EFJ19551.1| hypothetical protein SELMODRAFT_110288 [Selaginella moellendorffii]
          Length = 227

 Score =  267 bits (683), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 130/244 (53%), Positives = 177/244 (72%), Gaps = 26/244 (10%)

Query: 129 APILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQ 188
           AP+LPT++LP  FDWR+HGA+T VK+QG+CGSCW+FS+TGA+EGAHFL + EL+SL E+Q
Sbjct: 1   APLLPTDNLPKSFDWREHGAMTPVKNQGSCGSCWTFSSTGAVEGAHFLKSRELISLREEQ 60

Query: 189 LVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGS------- 241
           LVDCD           D GC GG M +A+EYI KA G+E E+DYPY   +          
Sbjct: 61  LVDCDR---------MDGGCKGGDMLNAYEYI-KAKGLEAEEDYPYQEENYKEYMFPHHR 110

Query: 242 CKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYIC--G 299
           C F  SK+AA ++N+S +S DEDQ+AANLVK+GPL++ +NA ++  Y+GGV+CP IC  G
Sbjct: 111 CHFRPSKVAATIANYSTVSEDEDQIAANLVKNGPLSIALNANYIMDYMGGVACPRICPGG 170

Query: 300 KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVS 359
             ++H VL+VGYG  G       +KPYWI+KNSW EN+GE+GY+++C G  VCG+++ VS
Sbjct: 171 DNMNHAVLLVGYGMDG-------DKPYWILKNSWSENYGEDGYFRLCRGFGVCGMNTRVS 223

Query: 360 SVAA 363
           +V+A
Sbjct: 224 TVSA 227


>gi|313220237|emb|CBY31096.1| unnamed protein product [Oikopleura dioica]
          Length = 371

 Score =  267 bits (683), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 161/373 (43%), Positives = 217/373 (58%), Gaps = 37/373 (9%)

Query: 9   LLLLLLSSVLASAVAVNDDD------AMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSK 62
           L  +L  S LA       D       +   +  P D + SED   +A   F  F  +  K
Sbjct: 3   LFSILAGSALAGVAEFLQDSYDHSKLSEFFKTTPEDFDVSED---DARKQFENFLLEHPK 59

Query: 63  TYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTPSEFRRQFLGLNRRLR 121
            Y+ QE H  RF+ F  NL+R K    ++  +A +GVT+F+DL+  EFRR +LGL   L+
Sbjct: 60  MYSEQESHS-RFQTFWENLKRIKFHNHIEQGSAKYGVTEFTDLSDFEFRRHYLGLKPELK 118

Query: 122 ----------LPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALE 171
                         ++K     T D    FDW + GAVT VK+QG CGSCW+FS TG +E
Sbjct: 119 NLNRKKYERKSRNSSKKLKFAKTAD--ETFDWVEKGAVTEVKNQGMCGSCWAFSTTGNIE 176

Query: 172 GAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKD 231
           GA F +TG+L+SLSEQ+LVDCD +         DSGCNGGLM+ AFE +++ GG+E E+ 
Sbjct: 177 GAWFKATGDLISLSEQELVDCDQK---------DSGCNGGLMDQAFEEVIRIGGLETEQQ 227

Query: 232 YPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGG 291
           YPY G    +C F+KS     + +F  I  DE+++A  L +HGPL++ INA  MQ Y GG
Sbjct: 228 YPYDGVQ-ETCNFEKSLSKVQIDDFMDIGEDEEEIAEALEEHGPLSIAINAFGMQFYRGG 286

Query: 292 VSCP--YICG-KYLDHGVLIVGYGSSGFAPIRFKE-KPYWIIKNSWGENWGENGYYKICM 347
           VS P  ++C    LDHGVL+VGYG       R +  +PYW IKNSWG  WGE+GYY++  
Sbjct: 287 VSHPLSFLCSPDGLDHGVLMVGYGVEHHTTWRHRHPRPYWKIKNSWGPRWGEDGYYRVAR 346

Query: 348 GRNVCGVDSMVSS 360
           G+ VCGV+ MVS+
Sbjct: 347 GKGVCGVNKMVST 359


>gi|163914827|ref|NP_001106423.1| cathepsin F precursor [Xenopus (Silurana) tropicalis]
 gi|157423494|gb|AAI53364.1| LOC100127591 protein [Xenopus (Silurana) tropicalis]
          Length = 463

 Score =  267 bits (683), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 147/345 (42%), Positives = 206/345 (59%), Gaps = 28/345 (8%)

Query: 22  VAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANL 81
           V + D +   +Q VPS   + ED +L     F  F + ++K Y+ QEE   R ++F  NL
Sbjct: 137 VELTDTETSQKQNVPSS--ELEDEMLKTLTLFKDFVTTYNKKYSDQEEAARRLQIFSQNL 194

Query: 82  RRAKRRQLLDP-TAVHGVTKFSDLTPSEFRRQFLG--LNRRLRLPADAQKAPILPTNDLP 138
           ++A+  Q +D  TA +GVTK+SDLT  EFR  +L   L+ +   P    K  I+P    P
Sbjct: 195 KKAQMIQEMDQGTAEYGVTKYSDLTEDEFRSLYLNPLLSSK---PLYQMKKAIVPNMSAP 251

Query: 139 TDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDP 198
             +DWRDHGAVT VK+QG CGSCW+FS  G +EG  FL  G LVSLSEQ+LVDCD     
Sbjct: 252 DQWDWRDHGAVTEVKNQGMCGSCWAFSVIGNIEGQWFLKKGSLVSLSEQELVDCD----- 306

Query: 199 EESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSV 258
                 D  C GGL ++A+E I K GG+E E++Y Y G    +C F  SK++A +++   
Sbjct: 307 ----GVDHACAGGLPSNAYEAIEKLGGIETEQEYSYEG-HKNTCSFSTSKVSAYINSSVE 361

Query: 259 ISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPY--ICGKYL-DHGVLIVGYGSSG 315
           I  DE+++AA L ++GP+++ +NA  MQ Y  G+S P+  +C  ++ DH VL+VGYG   
Sbjct: 362 IPKDENEIAAWLAQNGPISIALNAFAMQFYRKGISHPFRILCNPWMIDHAVLLVGYGERN 421

Query: 316 FAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSS 360
                    P+W IKNSWG +WGE GYY +  G   CG+++M SS
Sbjct: 422 GT-------PFWAIKNSWGTDWGEQGYYYLYRGTGACGMNTMCSS 459


>gi|324522685|gb|ADY48108.1| Cathepsin L, partial [Ascaris suum]
          Length = 308

 Score =  267 bits (682), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 143/314 (45%), Positives = 199/314 (63%), Gaps = 28/314 (8%)

Query: 56  FKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTPSEFRRQFL 114
           F  ++++TY+ ++E   RFR++K NLR AK  Q  +  TA++G T+FSDLT +EFR+  +
Sbjct: 10  FIGRYNRTYSNKKEMLKRFRIYKRNLRAAKIWQANEQGTAIYGETQFSDLTQAEFRK--I 67

Query: 115 GLNRRLRLPADAQKAPI-----LPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGA 169
            L  +   P    K        +  ND+P  FDWR+  AVT VK+QG+CGSCW+FS TG 
Sbjct: 68  MLPYKWETPKVPNKMANFKEFGIAQNDIPESFDWREKNAVTEVKNQGSCGSCWAFSVTGN 127

Query: 170 LEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVERE 229
           +EGA  + T +LVSLSEQ+LVDCD           D GCNGGL ++A+  I++ GG+E E
Sbjct: 128 IEGAWAIKTSKLVSLSEQELVDCD---------IIDQGCNGGLPSNAYREIIRMGGLEAE 178

Query: 230 KDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYI 289
            DYPY G  G  C   K  IA  +++   +  DE++MAA LV  GP+++G+NA  +Q Y 
Sbjct: 179 SDYPYDGR-GEKCHLMKKDIAVYINDSLQLPHDEEKMAAWLVAKGPISIGLNANPLQFYR 237

Query: 290 GGVSCPY--ICG-KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKIC 346
            G++ P+   C  K+LDHGVLIVGYGS         +KPYWIIKNSWG  WGE GY+++ 
Sbjct: 238 HGIAHPWRVFCSPKHLDHGVLIVGYGSE-------TDKPYWIIKNSWGTKWGEEGYFRLF 290

Query: 347 MGRNVCGVDSMVSS 360
            G+NVCG+  M ++
Sbjct: 291 RGKNVCGIQEMATT 304


>gi|427778331|gb|JAA54617.1| Putative cysteine proteinase cathepsin f [Rhipicephalus pulchellus]
          Length = 361

 Score =  267 bits (682), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 152/335 (45%), Positives = 208/335 (62%), Gaps = 35/335 (10%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRR-AKRRQLLDPTAVHGVTKFSDLTPSEFRR 111
           FS+F   ++KTY  +EEH+ RF +FK NL+R A   +L + TA +G+T+FSDL+PSEF R
Sbjct: 34  FSVFARTYNKTYKDKEEHEARFMIFKNNLKRIALFNRLEEGTAHYGLTEFSDLSPSEFER 93

Query: 112 QFLGLNRRL-RLPADAQKAPILPTND-LPTDFDWRDHGAVTGVKDQGACGSCWS------ 163
            +LGL + L    A+ +   + P N+ LP  FDWR  GAVT VK+QG CGSCW+      
Sbjct: 94  HYLGLKKDLAEHKAEVKPIKVGPVNEPLPDLFDWRTKGAVTEVKNQGMCGSCWAFSXXTE 153

Query: 164 ------------FSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGG 211
                       FS TG +EG  FLS  +L+SLSEQ+LVDCDH          D GC GG
Sbjct: 154 VKNQGMCGSCWAFSVTGNVEGQWFLSRSKLLSLSEQELVDCDH---------GDHGCKGG 204

Query: 212 LMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLV 271
            M  A + +++ GG+E E +YPY G D G+C+F+K++  A V +F  +  +E ++A  L+
Sbjct: 205 YMGQAMKAVIEMGGLETESEYPYKGVD-GTCEFNKTESKARVQSFVGLPQNETELAYWLM 263

Query: 272 KHGPLAVGINAVWMQTYIGGVSCP--YICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWI 328
           KHGP+++GINA  MQ Y GG+S P  ++C    LDHGVL+VG+G    +  R K  PYWI
Sbjct: 264 KHGPVSIGINANAMQFYFGGISHPWKFLCSPTDLDHGVLLVGFGVDKRS-FRRKPVPYWI 322

Query: 329 IKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAA 363
           +KNSWG+ WGE GYY++  G   CGV+ M  S   
Sbjct: 323 VKNSWGKYWGEKGYYRVYRGDGTCGVNQMALSAVV 357


>gi|224555777|gb|ACN56478.1| cathepsin F [Paralichthys olivaceus]
          Length = 475

 Score =  266 bits (680), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 148/320 (46%), Positives = 194/320 (60%), Gaps = 35/320 (10%)

Query: 52  HFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTPSEFR 110
            F  F  K++K Y++Q+E D R  +F  NL+ A++ Q LD  +A +GVTKFSDLT  EFR
Sbjct: 176 QFKEFMVKYNKVYSSQDEADRRLSIFHENLKTAEKLQSLDQGSAEYGVTKFSDLTEEEFR 235

Query: 111 RQFLG-------LNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWS 163
             +L        L+R ++ PA   K P       P  +DWRDHGAV+ VK+QG CGSCW+
Sbjct: 236 STYLNPLLSQWTLHRPMK-PASPAKGPA------PASWDWRDHGAVSSVKNQGMCGSCWA 288

Query: 164 FSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA 223
           FS TG +EG  FL  G LVSLSEQ+LVDCD           D  CNGGL ++A+E I K 
Sbjct: 289 FSVTGNIEGQWFLKNGTLVSLSEQELVDCD---------GLDQACNGGLPSNAYEAIEKL 339

Query: 224 GGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAV 283
           GG+E E DY Y G    SC F   K+AA +++   +S DE ++AA L ++GP++V +NA 
Sbjct: 340 GGLETETDYSYIGKK-QSCDFATKKVAAYINSSVELSKDEKEIAAWLAENGPVSVALNAF 398

Query: 284 WMQTYIGGVSCPY--ICGKYL-DHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGEN 340
            MQ Y  GVS P    C  ++ DH VL+VGYG         K  P+W IKNSWGE++GE 
Sbjct: 399 AMQFYRKGVSHPLKIFCNPWMIDHAVLMVGYGER-------KGIPFWAIKNSWGEDYGEQ 451

Query: 341 GYYKICMGRNVCGVDSMVSS 360
           GYY +  G N CG++ M SS
Sbjct: 452 GYYNLYRGSNACGINKMCSS 471


>gi|403183546|gb|EJY58173.1| AAEL017153-PA [Aedes aegypti]
          Length = 1165

 Score =  266 bits (679), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 149/339 (43%), Positives = 199/339 (58%), Gaps = 33/339 (9%)

Query: 37   SDGE----QSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP 92
            SDGE    + EDH   A H F  FK K S+ Y +  EH+ RFR+FK NL + ++    + 
Sbjct: 841  SDGEGHYSKGEDH---ARHLFEKFKLKHSREYQSTLEHEMRFRIFKNNLFKIEQLNKYEQ 897

Query: 93   -TAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQ-------KAPILPTNDLPTDFDWR 144
             TA +G+T F+D+T +E+R Q  GL     +P D         KA I    +LP  FDWR
Sbjct: 898  GTAKYGITHFADMTSAEYR-QRTGLV----IPRDEDRNHVGNPKAEIDENMELPESFDWR 952

Query: 145  DHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSC 204
            + GAV+ VK+QG CGSCW+FS  G +EG H + T  L   SEQ+L+DCD         + 
Sbjct: 953  ELGAVSPVKNQGNCGSCWAFSVVGNIEGLHQIKTKVLEEYSEQELLDCD---------AV 1003

Query: 205  DSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDED 264
            DS C GG M+ A++ I K GG+E E +YPY      +C F+ +++   V     +  +E 
Sbjct: 1004 DSACQGGYMDDAYKAIEKIGGLELESEYPYLAKKQKTCHFNSTEVHVRVKGAVDLPKNET 1063

Query: 265  QMAANLVKHGPLAVGINAVWMQTYIGGVSCPY--ICGKY-LDHGVLIVGYGSSGFAPIRF 321
             MA  LV +GP+++G+NA  MQ Y GG+S P+  +C K  LDHGVLIVGYG   + P+  
Sbjct: 1064 AMAQYLVANGPISIGLNANAMQFYRGGISHPWKPLCSKKNLDHGVLIVGYGVKEY-PMFN 1122

Query: 322  KEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSS 360
            K  PYWI+KNSWG  WGE GYY+I  G N CGV  M SS
Sbjct: 1123 KTMPYWIVKNSWGPKWGEQGYYRIFRGDNTCGVSEMASS 1161


>gi|347968731|ref|XP_003436277.1| AGAP002879-PB [Anopheles gambiae str. PEST]
 gi|333467869|gb|EGK96736.1| AGAP002879-PB [Anopheles gambiae str. PEST]
          Length = 1834

 Score =  265 bits (678), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 148/345 (42%), Positives = 199/345 (57%), Gaps = 39/345 (11%)

Query: 26   DDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAK 85
            DDDA +R++                  F  F+    + YA+  EH+ RF +F+ NL + +
Sbjct: 1515 DDDAHVRRM------------------FDKFRHHHRRQYASSMEHEMRFNIFRNNLFKIE 1556

Query: 86   RRQLLDP-TAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPAD------AQKAPILPTNDLP 138
            +    +  TA +GVTKF+D+T +E+R    GL       A+      A +  +    DLP
Sbjct: 1557 QLNKFERGTAKYGVTKFADMTVAEYR-AHTGLVVPKHDRANHVGNRVASEEDVAGVGDLP 1615

Query: 139  TDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDP 198
              FDWRDHGAVT VK+QG+CGSCW+FSA G +EG H + T +L S SEQ+L+DCD     
Sbjct: 1616 RSFDWRDHGAVTEVKNQGSCGSCWAFSAVGNVEGLHQIKTKKLESYSEQELIDCD----- 1670

Query: 199  EESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSV 258
                  D+GC GG M+ AF+ I + GG+E E DYPY      SC F++S     V     
Sbjct: 1671 ----KVDNGCGGGYMDDAFKAIEQLGGLELENDYPYEAKAQKSCHFNRSLSHVQVKGAVD 1726

Query: 259  ISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPY--ICG-KYLDHGVLIVGYGSSG 315
            +  +E  +A  L+K+GP+A+G+NA  MQ Y GG+S P+  +C  K +DHGVLIVGYG   
Sbjct: 1727 MPKNETYIAKYLIKNGPIAIGLNANAMQFYRGGISHPWHPLCNHKSIDHGVLIVGYGIKE 1786

Query: 316  FAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSS 360
            + P+  K  PYWIIKNSWG  WGE GYY+I  G N CGV  M SS
Sbjct: 1787 Y-PMFNKTLPYWIIKNSWGPRWGEQGYYRIYRGDNSCGVSEMASS 1830


>gi|347968733|ref|XP_312034.5| AGAP002879-PA [Anopheles gambiae str. PEST]
 gi|333467868|gb|EAA08025.5| AGAP002879-PA [Anopheles gambiae str. PEST]
          Length = 1810

 Score =  265 bits (678), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 148/345 (42%), Positives = 199/345 (57%), Gaps = 39/345 (11%)

Query: 26   DDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAK 85
            DDDA +R++                  F  F+    + YA+  EH+ RF +F+ NL + +
Sbjct: 1491 DDDAHVRRM------------------FDKFRHHHRRQYASSMEHEMRFNIFRNNLFKIE 1532

Query: 86   RRQLLDP-TAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPAD------AQKAPILPTNDLP 138
            +    +  TA +GVTKF+D+T +E+R    GL       A+      A +  +    DLP
Sbjct: 1533 QLNKFERGTAKYGVTKFADMTVAEYR-AHTGLVVPKHDRANHVGNRVASEEDVAGVGDLP 1591

Query: 139  TDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDP 198
              FDWRDHGAVT VK+QG+CGSCW+FSA G +EG H + T +L S SEQ+L+DCD     
Sbjct: 1592 RSFDWRDHGAVTEVKNQGSCGSCWAFSAVGNVEGLHQIKTKKLESYSEQELIDCD----- 1646

Query: 199  EESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSV 258
                  D+GC GG M+ AF+ I + GG+E E DYPY      SC F++S     V     
Sbjct: 1647 ----KVDNGCGGGYMDDAFKAIEQLGGLELENDYPYEAKAQKSCHFNRSLSHVQVKGAVD 1702

Query: 259  ISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPY--ICG-KYLDHGVLIVGYGSSG 315
            +  +E  +A  L+K+GP+A+G+NA  MQ Y GG+S P+  +C  K +DHGVLIVGYG   
Sbjct: 1703 MPKNETYIAKYLIKNGPIAIGLNANAMQFYRGGISHPWHPLCNHKSIDHGVLIVGYGIKE 1762

Query: 316  FAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSS 360
            + P+  K  PYWIIKNSWG  WGE GYY+I  G N CGV  M SS
Sbjct: 1763 Y-PMFNKTLPYWIIKNSWGPRWGEQGYYRIYRGDNSCGVSEMASS 1806


>gi|186688051|gb|ACC86111.1| cathepsin F [Paralichthys olivaceus]
          Length = 475

 Score =  265 bits (676), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 148/320 (46%), Positives = 194/320 (60%), Gaps = 35/320 (10%)

Query: 52  HFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTPSEFR 110
            F  F  K++K Y++Q+E D R  +F  NL+ A++ Q LD  +A +GVTKFSDLT  EFR
Sbjct: 176 QFKEFMVKYNKVYSSQDEADRRLSIFHENLKTAEKLQSLDQGSAEYGVTKFSDLTEEEFR 235

Query: 111 RQFLG-------LNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWS 163
             +L        L+R ++ PA   K P       P  +DWRDHGAV+ VK+QG CGSCW+
Sbjct: 236 STYLNPLLSQWTLHRPMK-PASPAKGPA------PASWDWRDHGAVSSVKNQGMCGSCWA 288

Query: 164 FSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA 223
           FS TG +EG  FL  G LVSLSEQ+LVDCD           D  CNGGL ++A+E I K 
Sbjct: 289 FSVTGNIEGQWFLKNGTLVSLSEQELVDCD---------GLDQACNGGLPSNAYEAIEKL 339

Query: 224 GGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAV 283
           GG+E E DY Y G    SC F   K+AA +++   +S DE ++AA L ++GP++V +NA 
Sbjct: 340 GGLETETDYSYIGKK-QSCDFATKKVAAYINSSVELSKDEKEIAAWLAENGPVSVALNAF 398

Query: 284 WMQTYIGGVSCPY--ICGKYL-DHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGEN 340
            MQ Y  GVS P    C  ++ DH VL+VGYG         K  P+W IKNSWGE++GE 
Sbjct: 399 AMQFYRKGVSHPLKIFCNPWMIDHAVLMVGYGER-------KGIPFWAIKNSWGEDYGEQ 451

Query: 341 GYYKICMGRNVCGVDSMVSS 360
           GYY +  G N CG++ M SS
Sbjct: 452 GYYYLHRGSNACGINKMCSS 471


>gi|347968729|ref|XP_003436276.1| AGAP002879-PC [Anopheles gambiae str. PEST]
 gi|333467870|gb|EGK96737.1| AGAP002879-PC [Anopheles gambiae str. PEST]
          Length = 953

 Score =  264 bits (674), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 148/345 (42%), Positives = 199/345 (57%), Gaps = 39/345 (11%)

Query: 26  DDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAK 85
           DDDA +R++                  F  F+    + YA+  EH+ RF +F+ NL + +
Sbjct: 634 DDDAHVRRM------------------FDKFRHHHRRQYASSMEHEMRFNIFRNNLFKIE 675

Query: 86  RRQLLDP-TAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPAD------AQKAPILPTNDLP 138
           +    +  TA +GVTKF+D+T +E+R    GL       A+      A +  +    DLP
Sbjct: 676 QLNKFERGTAKYGVTKFADMTVAEYRAH-TGLVVPKHDRANHVGNRVASEEDVAGVGDLP 734

Query: 139 TDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDP 198
             FDWRDHGAVT VK+QG+CGSCW+FSA G +EG H + T +L S SEQ+L+DCD     
Sbjct: 735 RSFDWRDHGAVTEVKNQGSCGSCWAFSAVGNVEGLHQIKTKKLESYSEQELIDCD----- 789

Query: 199 EESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSV 258
                 D+GC GG M+ AF+ I + GG+E E DYPY      SC F++S     V     
Sbjct: 790 ----KVDNGCGGGYMDDAFKAIEQLGGLELENDYPYEAKAQKSCHFNRSLSHVQVKGAVD 845

Query: 259 ISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPY--ICG-KYLDHGVLIVGYGSSG 315
           +  +E  +A  L+K+GP+A+G+NA  MQ Y GG+S P+  +C  K +DHGVLIVGYG   
Sbjct: 846 MPKNETYIAKYLIKNGPIAIGLNANAMQFYRGGISHPWHPLCNHKSIDHGVLIVGYGIKE 905

Query: 316 FAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSS 360
           + P+  K  PYWIIKNSWG  WGE GYY+I  G N CGV  M SS
Sbjct: 906 Y-PMFNKTLPYWIIKNSWGPRWGEQGYYRIYRGDNSCGVSEMASS 949


>gi|6649575|gb|AAF21461.1|U69120_1 cysteine proteinase PWCP1 [Paragonimus westermani]
          Length = 427

 Score =  263 bits (673), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 138/315 (43%), Positives = 193/315 (61%), Gaps = 23/315 (7%)

Query: 48  NAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTP 106
           N    F  F+ KF K+Y++      R+ +FK NL + +  Q L+  TA +G+TKFSDL+ 
Sbjct: 122 NTSRLFEEFQRKFRKSYSSDTAK--RYALFKYNLLKMQLIQRLEKGTANYGITKFSDLSA 179

Query: 107 SEFRRQFLGLNRRLRLPADAQKAPILPT--NDLPTDFDWRDHGAVTGVKDQGACGSCWSF 164
            EFR     + RR +      +  I PT    LP  FDWR +GAVT VKDQG CGSCW+F
Sbjct: 180 EEFRHSLANMKRR-KSKGSQMETAIFPTTIQSLPPSFDWRANGAVTEVKDQGMCGSCWAF 238

Query: 165 SATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAG 224
           + TG +EG  F  T +L+SLSEQQL+DCD +         D  CNGGL   A++ I+K G
Sbjct: 239 ATTGNIEGQWFRKTNKLISLSEQQLLDCDTK---------DEACNGGLPEWAYDEIVKMG 289

Query: 225 GVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW 284
           G+  EKDYPY      SC   +  I+A ++  + + SDE ++AA LV++GP++VG+NA +
Sbjct: 290 GLMSEKDYPYEAMKEQSCHLRRPNISAYINGSATLPSDEAKLAAWLVQNGPISVGVNANF 349

Query: 285 MQTYIGGVSCP--YICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENG 341
           +Q Y+GG+S P   +C +  LDH VL+VGYG S F       +PYWI+KNSWG  WGE G
Sbjct: 350 LQFYLGGISHPPHMLCSEAGLDHAVLLVGYGVSTFL-----RRPYWIVKNSWGGGWGEKG 404

Query: 342 YYKICMGRNVCGVDS 356
           Y+++  G   CG+++
Sbjct: 405 YFRMYRGDGTCGINA 419


>gi|341878637|gb|EGT34572.1| hypothetical protein CAEBREN_13324 [Caenorhabditis brenneri]
          Length = 478

 Score =  263 bits (672), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 146/345 (42%), Positives = 203/345 (58%), Gaps = 27/345 (7%)

Query: 24  VNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRR 83
            +DD   ++++  +   +  D+++   + F  F  +  K Y  + E   RFRVFK N + 
Sbjct: 149 THDDSVTVQELRKAKIIKPRDYVI--WNSFLDFIDRHEKRYENKREVLKRFRVFKRNAKV 206

Query: 84  AKRRQLLDP-TAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADA----QKAPILPTNDLP 138
            +  Q  +  TAV+G TKFSD+T  EF+   L       +P D     ++   +   DLP
Sbjct: 207 IRELQKNEQGTAVYGFTKFSDMTTMEFKETMLPYQWEQPVPMDQANFEKEGVTISEEDLP 266

Query: 139 TDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDP 198
             FDWR+HGAVT VK+QG+CGSCW+FS TG +EGA FL+  +LVSLSEQ+LVDCD     
Sbjct: 267 DSFDWREHGAVTQVKNQGSCGSCWAFSTTGNIEGAWFLAKKKLVSLSEQELVDCD----- 321

Query: 199 EESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSV 258
               S D GCNGGL ++A++ I++ GG+E E  YPY G  G +C   +  IA  ++    
Sbjct: 322 ----SVDQGCNGGLPSNAYKEIIRMGGLEPEDAYPYDGR-GETCHLVRKDIAVYINGSVE 376

Query: 259 ISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPY--ICGKY-LDHGVLIVGYGSSG 315
           +  DE +M   LV  GP+++G+NA  +Q Y  GV  P+   C  + L+HGVLIVGYG  G
Sbjct: 377 LPHDEVEMQKWLVTKGPISIGLNANTLQFYRHGVVHPFKIFCEPFMLNHGVLIVGYGKDG 436

Query: 316 FAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSS 360
                   KPYWI+KNSWG  WGE GY+K+  G+NVCGV  M +S
Sbjct: 437 -------RKPYWIVKNSWGPTWGEAGYFKLYRGKNVCGVQEMATS 474


>gi|341878608|gb|EGT34543.1| hypothetical protein CAEBREN_26318 [Caenorhabditis brenneri]
          Length = 478

 Score =  263 bits (672), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 146/345 (42%), Positives = 203/345 (58%), Gaps = 27/345 (7%)

Query: 24  VNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRR 83
            +DD   ++++  +   +  D+++   + F  F  +  K Y  + E   RFRVFK N + 
Sbjct: 149 THDDSVTVQELRKAKIIKPRDYVV--WNSFLDFIDRHEKRYENKREVLKRFRVFKRNAKV 206

Query: 84  AKRRQLLDP-TAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADA----QKAPILPTNDLP 138
            +  Q  +  TAV+G TKFSD+T  EF+   L       +P D     ++   +   DLP
Sbjct: 207 IRELQKNEQGTAVYGFTKFSDMTTMEFKETMLPYQWEQPVPMDQANFEKEGVTISEEDLP 266

Query: 139 TDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDP 198
             FDWR+HGAVT VK+QG+CGSCW+FS TG +EGA FL+  +LVSLSEQ+LVDCD     
Sbjct: 267 DSFDWREHGAVTQVKNQGSCGSCWAFSTTGNIEGAWFLAKKKLVSLSEQELVDCD----- 321

Query: 199 EESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSV 258
               S D GCNGGL ++A++ I++ GG+E E  YPY G  G +C   +  IA  ++    
Sbjct: 322 ----SVDQGCNGGLPSNAYKEIIRMGGLEPEDAYPYDGR-GETCHLVRKDIAVYINGSVE 376

Query: 259 ISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPY--ICGKY-LDHGVLIVGYGSSG 315
           +  DE +M   LV  GP+++G+NA  +Q Y  GV  P+   C  + L+HGVLIVGYG  G
Sbjct: 377 LPHDEVEMQKWLVTKGPISIGLNANTLQFYRHGVVHPFKIFCEPFMLNHGVLIVGYGKDG 436

Query: 316 FAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSS 360
                   KPYWI+KNSWG  WGE GY+K+  G+NVCGV  M +S
Sbjct: 437 -------RKPYWIVKNSWGPTWGEAGYFKLYRGKNVCGVQEMATS 474


>gi|242014216|ref|XP_002427787.1| Cathepsin F precursor, putative [Pediculus humanus corporis]
 gi|212512256|gb|EEB15049.1| Cathepsin F precursor, putative [Pediculus humanus corporis]
          Length = 434

 Score =  262 bits (670), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 137/321 (42%), Positives = 201/321 (62%), Gaps = 22/321 (6%)

Query: 44  DHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFS 102
           ++LL +   F L   KF+K Y ++EE   RFR+F+AN+++       +  TA +G+T+FS
Sbjct: 128 EYLLQSFKDFVL---KFNKVYFSKEEFKKRFRIFRANMKKINFLNKAEKGTAQYGITEFS 184

Query: 103 DLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCW 162
           DL+ +EF+  +LGL ++   P        +P   LP +FDWR + AVT VK+QG+CGSCW
Sbjct: 185 DLSVTEFK-NYLGLKKK---PESKLPTAEIPDVKLPDNFDWRHYNAVTPVKNQGSCGSCW 240

Query: 163 SFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK 222
           +FS TG +EG   +   EL+SLSEQ+L+DCD           D+GCNGG M   +E I+K
Sbjct: 241 AFSVTGNIEGLWAIKKHELLSLSEQELIDCD---------KIDNGCNGGYMPETYEAIMK 291

Query: 223 AGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA 282
            GG+E E DYPY   +   C  +K++I   ++    ++  E  +A  L K+GP++ G+NA
Sbjct: 292 LGGLETETDYPYEA-ENEKCNLNKTEIKVKINGAVNLTKSELDIAKWLYKNGPVSAGLNA 350

Query: 283 VWMQTYIGGVSCP--YICG-KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGE 339
             MQ Y+GG+S P   +C  +  DHG+LIVGYG    + ++ +  PYWIIKNSWG++WGE
Sbjct: 351 NAMQFYLGGISHPPKILCNPEEQDHGILIVGYGIHKSSILK-RTIPYWIIKNSWGKHWGE 409

Query: 340 NGYYKICMGRNVCGVDSMVSS 360
            GYY++  G  VCG++ MVSS
Sbjct: 410 KGYYRLYRGSGVCGINQMVSS 430


>gi|312378084|gb|EFR24752.1| hypothetical protein AND_10451 [Anopheles darlingi]
          Length = 1785

 Score =  262 bits (669), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 140/320 (43%), Positives = 193/320 (60%), Gaps = 26/320 (8%)

Query: 52   HFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTPSEFR 110
             F  FK    + YA+  EH+ R+ +F+ NL +  +    +  T  +GVTKF+D+T +E+R
Sbjct: 1477 QFEKFKLHHQRQYASSFEHEMRYNIFRNNLYKIDQLNRHERGTGKYGVTKFADMTTAEYR 1536

Query: 111  RQFLGLNRRLRLP---ADAQKAPILPTN----DLPTDFDWRDHGAVTGVKDQGACGSCWS 163
                  +  L +P   ++  + PI   +     LPT FDWRDHGAVTGVK+QG CGSCW+
Sbjct: 1537 -----AHTGLIVPKQHSNHIRNPIATVSTERTSLPTSFDWRDHGAVTGVKNQGNCGSCWA 1591

Query: 164  FSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA 223
            FSA G +EG H + T +L + SEQ+L+DCD         + D+GCNGG M+ AF+ I K 
Sbjct: 1592 FSAIGNIEGLHQIKTKKLEAYSEQELIDCD---------TVDNGCNGGYMDDAFKAIEKL 1642

Query: 224  GGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAV 283
            GG+E E +YPY      +C F+K+     V     +  +E  +A  L+++GP+A+G+NA 
Sbjct: 1643 GGLELEDEYPYQAKAQKTCHFNKTLSHVRVKGAVDMPKNETFIAQYLIENGPIAIGLNAN 1702

Query: 284  WMQTYIGGVSCPY--ICG-KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGEN 340
             MQ Y GG+S P+  +C  K +DHGVLIVGYG   + P+  K  PYW IKNSWG  WGE 
Sbjct: 1703 AMQFYRGGISHPWHLLCSHKQIDHGVLIVGYGVKEY-PLFNKTLPYWTIKNSWGPKWGEQ 1761

Query: 341  GYYKICMGRNVCGVDSMVSS 360
            GYY+I  G N CGV  M SS
Sbjct: 1762 GYYRIYRGDNSCGVSEMASS 1781


>gi|170032975|ref|XP_001844355.1| conserved hypothetical protein [Culex quinquefasciatus]
 gi|167873312|gb|EDS36695.1| conserved hypothetical protein [Culex quinquefasciatus]
          Length = 1454

 Score =  262 bits (669), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 142/331 (42%), Positives = 199/331 (60%), Gaps = 28/331 (8%)

Query: 41   QSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVT 99
            +SEDH   + H F  FK++ ++TY +  EH+ RFR+FK NL + ++    +  TA +G+T
Sbjct: 1137 KSEDH---SRHLFDKFKTRHNRTYQSSLEHEMRFRIFKNNLFKIEQLNKYEQGTAKYGIT 1193

Query: 100  KFSDLTPSEFR-RQFLGLNRR------LRLPADAQKAPILPTNDLPTDFDWRDHGAVTGV 152
             F+D+T +E+R R  L + R       +R P     A I    +LP  FDWR+ GAV+ V
Sbjct: 1194 HFADMTSAEYRARTGLVVPREGDEVNHIRNPM----AEIDEHMELPDAFDWRELGAVSEV 1249

Query: 153  KDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGL 212
            K+QG CGSCW+FS  G +EG H + T +L   SEQ+L+DCD         + DS CNGG 
Sbjct: 1250 KNQGNCGSCWAFSVVGNIEGLHQVKTKKLEEYSEQELLDCD---------TVDSACNGGF 1300

Query: 213  MNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVK 272
            M+ A++ I K GG+E E +YPY      +C F+K+     V     +  +E  +A  LV 
Sbjct: 1301 MDDAYKAIEKIGGLELESEYPYLAKKQKTCHFNKTMAHVRVKGAVDLPKNETAIAQFLVA 1360

Query: 273  HGPLAVGINAVWMQTYIGGVSCPY--ICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWII 329
            +GP+++G+NA  MQ Y GG+S P+  +C K  LDHGVLIVGYG   + P+  K  PYWI+
Sbjct: 1361 NGPVSIGLNANAMQFYRGGISHPWKPLCSKKNLDHGVLIVGYGVKEY-PMFNKTLPYWIV 1419

Query: 330  KNSWGENWGENGYYKICMGRNVCGVDSMVSS 360
            KNSWG  WGE GYY++  G N CGV  M +S
Sbjct: 1420 KNSWGPKWGEQGYYRVFRGDNTCGVSEMATS 1450


>gi|195111686|ref|XP_002000409.1| GI10216 [Drosophila mojavensis]
 gi|193917003|gb|EDW15870.1| GI10216 [Drosophila mojavensis]
          Length = 605

 Score =  262 bits (669), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 144/324 (44%), Positives = 198/324 (61%), Gaps = 23/324 (7%)

Query: 46  LLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP---TAVHGVTKFS 102
           L   +H F +F+ K+ + YA   EH  R R+F+ NLR  +  +L D    +A +G+T+F+
Sbjct: 292 LNKVDHLFHVFQIKYKRRYANSMEHQMRLRIFRQNLRTIQ--ELNDNEQGSAKYGITEFA 349

Query: 103 DLTPSEFRRQFLGLNRRLRLPADAQKAPILPT--NDLPTDFDWRDHGAVTGVKDQGACGS 160
           D+T SE+  Q  GL +R        K  ++P    +LP +FDWR+  AVT VK+QG+CGS
Sbjct: 350 DMTSSEYT-QRAGLWQRSANKPTGGKPAVVPAYKGELPKEFDWREKNAVTQVKNQGSCGS 408

Query: 161 CWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYI 220
           CW+FS TG +EG + + TGEL   SEQ+L+DCD         S DS CNGGLM++A++ I
Sbjct: 409 CWAFSVTGNIEGLYAIKTGELREFSEQELLDCD---------STDSACNGGLMDNAYKAI 459

Query: 221 LKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVG 279
              GG+E E +YPY       C F+K+     V++F  +   +E  M   L+ +GP+++G
Sbjct: 460 KDIGGLEYESEYPYLAKK-KQCHFNKTLSHVQVADFVDLPKGNETAMQEWLLANGPISIG 518

Query: 280 INAVWMQTYIGGVSCPY--ICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGEN 336
           +NA  MQ Y GGVS P+  +C K  LDHGVLIVGYG S + P   K  PYWI+KNSWG  
Sbjct: 519 LNANAMQFYRGGVSHPWGPLCSKKNLDHGVLIVGYGVSDY-PNFHKTLPYWIVKNSWGPR 577

Query: 337 WGENGYYKICMGRNVCGVDSMVSS 360
           WGE GYY+I  G N CGV  M +S
Sbjct: 578 WGEQGYYRIYRGDNTCGVSEMATS 601


>gi|156389068|ref|XP_001634814.1| predicted protein [Nematostella vectensis]
 gi|156221901|gb|EDO42751.1| predicted protein [Nematostella vectensis]
          Length = 276

 Score =  261 bits (668), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 138/293 (47%), Positives = 191/293 (65%), Gaps = 27/293 (9%)

Query: 74  FRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTPSEFRRQFL--GLNRRLRLPADAQKAP 130
            ++F++N+R+A + Q +D  TA +G T FSDL+  EFR+Q +  G  + L    DA+   
Sbjct: 1   MKIFESNMRKAAKMQKMDSGTAQYGPTIFSDLSEEEFRKQKMMPGWGKPLYEMKDAE--- 57

Query: 131 ILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLV 190
            +P  D+P   DWRD G VT VK+QG+CGSCW+FS TG +EG + + TG+LVSLSEQ+LV
Sbjct: 58  -IPLGDIPESVDWRDKGVVTPVKNQGSCGSCWAFSTTGNIEGQYAIKTGKLVSLSEQELV 116

Query: 191 DCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIA 250
           DCD         + D GC GGL ++A++ I K GG+E E DYPY G D   CKF+K+++ 
Sbjct: 117 DCD---------TIDKGCEGGLPSNAYKQIEKLGGLESESDYPYKGAD-SKCKFNKAEVK 166

Query: 251 AAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPY--ICG-KYLDHGVL 307
             +++  VIS DE ++AA L K+GP+++GINA  MQ Y+GG++ P+   C    L+HGVL
Sbjct: 167 VTINSSVVISKDEKEIAAWLAKNGPISIGINANAMQFYMGGIAHPWKIFCNPSSLNHGVL 226

Query: 308 IVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSS 360
           IVGYG            PYWIIKNSWG +WGE GYY I  G   CG+++M +S
Sbjct: 227 IVGYGVKNGT-------PYWIIKNSWGPSWGEKGYYLIYRGGGCCGLNTMCTS 272


>gi|24417396|gb|AAN60308.1| unknown [Arabidopsis thaliana]
          Length = 193

 Score =  260 bits (664), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 132/197 (67%), Positives = 155/197 (78%), Gaps = 6/197 (3%)

Query: 1   MERLILS-SLLLLLLSSVLASAVAVND-DDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKS 58
           M+RL L  S+ +L    VL S+  VND DD +IRQVV      +E  +L +E HFSLFK 
Sbjct: 1   MDRLKLYFSVFVLSFFIVLVSSSDVNDGDDLVIRQVVGG----AEPQVLTSEDHFSLFKR 56

Query: 59  KFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNR 118
           KF K YA+ EEHDYRF VFKANLRRA+R Q LDP+A HGVT+FSDLT SEFR++ LG+  
Sbjct: 57  KFGKVYASNEEHDYRFSVFKANLRRARRHQKLDPSATHGVTQFSDLTRSEFRKKHLGVRS 116

Query: 119 RLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLST 178
             +LP DA KAPILPT +LP DFDWRDHGAVT VK+QG+CGSCWSFSATGALEGA+FL+T
Sbjct: 117 GFKLPKDANKAPILPTENLPEDFDWRDHGAVTPVKNQGSCGSCWSFSATGALEGANFLAT 176

Query: 179 GELVSLSEQQLVDCDHE 195
           G+LVSLSEQQLVDCDH+
Sbjct: 177 GKLVSLSEQQLVDCDHQ 193


>gi|348528696|ref|XP_003451852.1| PREDICTED: cathepsin F-like [Oreochromis niloticus]
          Length = 475

 Score =  259 bits (662), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 144/323 (44%), Positives = 193/323 (59%), Gaps = 35/323 (10%)

Query: 52  HFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTPSEFR 110
            F  F +K++K Y++QEE D R R+F  NL+ A++ Q LD  +A +GVTKFSDLT  EFR
Sbjct: 176 QFKEFMTKYNKVYSSQEEVDRRLRIFHENLKTAEKLQALDQGSAEYGVTKFSDLTEEEFR 235

Query: 111 RQFLG-------LNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWS 163
             +L        L++ ++ PA   K P       P  +DWRDHGAV+ VK+QG CGSCW+
Sbjct: 236 STYLNPLLSQWTLHQPMK-PATPAKGPS------PDSWDWRDHGAVSPVKNQGMCGSCWA 288

Query: 164 FSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA 223
           FS  G +EG  FL  G L+SLSEQ+LVDCD           D  C GGL ++A+E I K 
Sbjct: 289 FSVIGNIEGQWFLKNGTLLSLSEQELVDCD---------GLDQACRGGLPSNAYEAIEKL 339

Query: 224 GGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAV 283
           GG+E E DY YTG     C F   K+AA +++   +  DE ++AA L ++GP++V +NA 
Sbjct: 340 GGLETESDYSYTGHK-QRCDFTTGKVAAYINSSVELPKDEKEIAAWLAENGPVSVALNAF 398

Query: 284 WMQTYIGGVSCPY--ICGKYL-DHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGEN 340
            MQ Y  G+S P    C  ++ DH VL+VGYG         K  P+W IKNSWGE++GE 
Sbjct: 399 AMQFYRKGISHPLKIFCNPWMIDHAVLLVGYGER-------KGIPFWAIKNSWGEDYGEQ 451

Query: 341 GYYKICMGRNVCGVDSMVSSVAA 363
           GYY +  G N CG++ M SS   
Sbjct: 452 GYYYLYRGSNACGINKMCSSAVV 474


>gi|195453400|ref|XP_002073772.1| GK14287 [Drosophila willistoni]
 gi|194169857|gb|EDW84758.1| GK14287 [Drosophila willistoni]
          Length = 610

 Score =  259 bits (661), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 141/331 (42%), Positives = 197/331 (59%), Gaps = 20/331 (6%)

Query: 39  GEQSEDH--LLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAV 95
           G +  +H  L   EH F  F+ KF + Y    E   R R+F+ NLR  ++    +  +A 
Sbjct: 287 GHKKHNHHSLDKVEHLFHKFQIKFERRYVNSVERQMRLRIFRQNLRIIEQLNANEMGSAK 346

Query: 96  HGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKA--PILPTNDLPTDFDWRDHGAVTGVK 153
           +G+T+F+D+T +E++ +     R    P   QKA  P  P  +LP +FDWR  GAV+ VK
Sbjct: 347 YGITEFADMTSTEYKERTGLWQRTEGQPTGGQKAVVPSYPGGELPKEFDWRQKGAVSSVK 406

Query: 154 DQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLM 213
           +QG+CGSCW+FS  G +EG + + TG+L   SEQ+L+DCD         + DS CNGGL 
Sbjct: 407 NQGSCGSCWAFSTIGNIEGLNAVKTGQLKEFSEQELLDCD---------TKDSACNGGLP 457

Query: 214 NSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVK 272
           ++A++ I + GG+E E +YPY       C F+K+     V+ F  +  ++E  M   L+ 
Sbjct: 458 DNAYKAIQEIGGLEYESEYPYKARK-EQCHFNKTLAHVQVTGFVDLPKNNETAMQEWLIA 516

Query: 273 HGPLAVGINAVWMQTYIGGVSCPY--ICGK-YLDHGVLIVGYGSSGFAPIRFKEKPYWII 329
           +GP+++GINA  MQ Y GGVS P+  +C K  LDHGVLIVGYG S + P   K  PYWI+
Sbjct: 517 NGPISIGINANAMQFYRGGVSHPWKILCEKSNLDHGVLIVGYGVSDY-PNFHKTLPYWIV 575

Query: 330 KNSWGENWGENGYYKICMGRNVCGVDSMVSS 360
           KNSWG  WGE GYY++  G N CGV  M SS
Sbjct: 576 KNSWGPRWGEQGYYRVYRGDNTCGVSEMASS 606


>gi|194746631|ref|XP_001955780.1| GF16067 [Drosophila ananassae]
 gi|190628817|gb|EDV44341.1| GF16067 [Drosophila ananassae]
          Length = 620

 Score =  259 bits (661), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 138/322 (42%), Positives = 193/322 (59%), Gaps = 19/322 (5%)

Query: 46  LLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDL 104
           L   EH F  F+ +F + Y +  E   R R+F+ NL+  +     +  +A +G+T+F+D+
Sbjct: 307 LDKVEHLFHKFQVRFGRRYVSTAERQMRLRIFRQNLKTIEELNANEMGSAKYGITEFADM 366

Query: 105 TPSEFRRQFLGLNRRLRLPADAQKAPILP--TNDLPTDFDWRDHGAVTGVKDQGACGSCW 162
           T +E++ +  GL +R    A      ++P  + +LP +FDWR   AVTGVK+QG CGSCW
Sbjct: 367 TSTEYKER-TGLWQRDEAKATGGSPAVVPAYSGELPKEFDWRSKNAVTGVKNQGQCGSCW 425

Query: 163 SFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK 222
           +FS TG +EG + L  GEL   SEQ+L+DCD         + DS CNGGLM++A++ I  
Sbjct: 426 AFSVTGNIEGLYALKYGELKEFSEQELLDCD---------TTDSACNGGLMDNAYKAIKD 476

Query: 223 AGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVGIN 281
            GG+E E +YPY       C F+K+     V +F  +   +E  M   LV +GP+++GIN
Sbjct: 477 IGGLEYEAEYPYEAKK-KQCHFNKTMSHVQVKDFVDLPKGNETAMQEWLVSNGPISIGIN 535

Query: 282 AVWMQTYIGGVSCPY--ICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWG 338
           A  MQ Y GGVS P+  +C K  LDHGVL+VGYG S + P   K  PYWI+KNSWG  WG
Sbjct: 536 ANAMQFYRGGVSHPWKALCSKKNLDHGVLVVGYGVSDY-PNYHKTLPYWIVKNSWGPRWG 594

Query: 339 ENGYYKICMGRNVCGVDSMVSS 360
           E GYY++  G N CGV  M +S
Sbjct: 595 EQGYYRVYRGDNTCGVSEMATS 616


>gi|195054270|ref|XP_001994049.1| GH22731 [Drosophila grimshawi]
 gi|193895919|gb|EDV94785.1| GH22731 [Drosophila grimshawi]
          Length = 617

 Score =  259 bits (661), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 141/324 (43%), Positives = 194/324 (59%), Gaps = 20/324 (6%)

Query: 45  HLLNA-EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFS 102
           H LN  EH F  F+ K+ + YA   EH  R R+F+ NLR  +     +  +A +G+T+F+
Sbjct: 302 HTLNKIEHLFHKFQLKYKRQYANTAEHQMRLRIFRQNLRTIEELNANERGSAKYGITQFA 361

Query: 103 DLTPSEFRRQFLGLNRRLRLPADAQKAPILP--TNDLPTDFDWRDHGAVTGVKDQGACGS 160
           D+T +E++    GL +R         A ++P    ++P +FDWR   AVT VK+QG CGS
Sbjct: 362 DMTSTEYKLH-AGLWQRSEDKPTGGAAAVVPPYAGEMPKEFDWRQKKAVTHVKNQGQCGS 420

Query: 161 CWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYI 220
           CW+FS TG +EG + + TGEL   SEQ+L+DCD         S DS CNGGLM++A++ I
Sbjct: 421 CWAFSVTGNIEGLYAIKTGELEEFSEQELLDCD---------STDSACNGGLMDNAYKAI 471

Query: 221 LKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVG 279
              GG+E E +YPY       C F+++     +S F  +   +E  M   L+ +GP+++G
Sbjct: 472 KDIGGLEYESEYPYAAKK-MQCHFNRTMSHVQLSGFVDLPKGNETAMQEWLLSNGPISIG 530

Query: 280 INAVWMQTYIGGVSCPY--ICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGEN 336
           +NA  MQ Y GGVS P+  +C K  LDHGVLIVGYG S + P   K  PYWI+KNSWG  
Sbjct: 531 LNANAMQFYRGGVSHPWAPLCSKKNLDHGVLIVGYGVSDY-PNFHKTLPYWIVKNSWGPR 589

Query: 337 WGENGYYKICMGRNVCGVDSMVSS 360
           WGE GYY+I  G N CGV  M +S
Sbjct: 590 WGEQGYYRIYRGDNTCGVSEMATS 613


>gi|195497262|ref|XP_002096026.1| GE25302 [Drosophila yakuba]
 gi|194182127|gb|EDW95738.1| GE25302 [Drosophila yakuba]
          Length = 615

 Score =  259 bits (661), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 137/328 (41%), Positives = 198/328 (60%), Gaps = 19/328 (5%)

Query: 40  EQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGV 98
           + S   L  A+H F  F+ +F + Y +  E   R R+F+ NL+  ++  + +  +A +G+
Sbjct: 296 KHSHRALDKADHLFHKFQVRFGRRYVSTAERQMRLRIFRQNLKTIEQLNVNEMGSAKYGI 355

Query: 99  TKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPT--NDLPTDFDWRDHGAVTGVKDQG 156
           T+F+D+T SE++ +  GL +R    A      ++P    +LP +FDWR   AVT VK+QG
Sbjct: 356 TEFADMTSSEYKER-TGLWQRNEAKATGGSVAVVPAYHGELPKEFDWRQKNAVTQVKNQG 414

Query: 157 ACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSA 216
           +CGSCW+FS TG +EG H + TG+L   SEQ+L+DCD         + DS CNGGLM++A
Sbjct: 415 SCGSCWAFSVTGNIEGLHAVKTGDLKEFSEQELLDCD---------TTDSACNGGLMDNA 465

Query: 217 FEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGP 275
           ++ I   GG+E E +YPY       C F+++     V+ F  +   +E  M   L+ +GP
Sbjct: 466 YKAIKDIGGLEYEAEYPYKAKK-NQCHFNRTLSHVQVAGFVDLPKGNETAMQEWLLTNGP 524

Query: 276 LAVGINAVWMQTYIGGVSCPY--ICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNS 332
           +++GINA  MQ Y GGVS P+  +C K  LDHGVL+VGYG S + P   K  PYWI+KNS
Sbjct: 525 ISIGINANAMQFYRGGVSHPWKALCSKKNLDHGVLVVGYGVSEY-PNFHKTLPYWIVKNS 583

Query: 333 WGENWGENGYYKICMGRNVCGVDSMVSS 360
           WG  WGE GYY++  G N CGV  M +S
Sbjct: 584 WGPRWGEQGYYRVYRGDNTCGVSEMATS 611


>gi|195395906|ref|XP_002056575.1| GJ11017 [Drosophila virilis]
 gi|194143284|gb|EDW59687.1| GJ11017 [Drosophila virilis]
          Length = 599

 Score =  258 bits (659), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 140/322 (43%), Positives = 194/322 (60%), Gaps = 19/322 (5%)

Query: 46  LLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDL 104
           L   +H F  F+ K+ + YA   EH  R R+F+ +L+  +     +  +A +G+T+F+D+
Sbjct: 286 LNKVDHLFHKFQVKYKRRYANSAEHQMRLRIFRQSLKTIQELNANEQGSAKYGITEFADM 345

Query: 105 TPSEFRRQFLGLNRRLRLPADAQKAPILPT--NDLPTDFDWRDHGAVTGVKDQGACGSCW 162
           T +E+  Q  GL +R         A ++P    +LP +FDWR   AVT VK+QG CGSCW
Sbjct: 346 TSTEYA-QRAGLWQRSEGKPTGGAAAVVPAYAGELPKEFDWRQKNAVTHVKNQGQCGSCW 404

Query: 163 SFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK 222
           +FS TG +EGA+ + TG+L   SEQ+L+DCD         S DS CNGGLM++A++ I  
Sbjct: 405 AFSVTGNIEGAYAIKTGDLQEFSEQELLDCD---------SKDSACNGGLMDNAYKAIKD 455

Query: 223 AGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVGIN 281
            GG+E E +YPY G     C F+++     VS F  +   +E  M   L+ +GP+++GIN
Sbjct: 456 IGGLEYESEYPYEGKK-KQCHFNRTLSHVQVSGFVDLPKGNETAMQEWLLTNGPISIGIN 514

Query: 282 AVWMQTYIGGVSCPY--ICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWG 338
           A  MQ Y GGVS P+  +C K  LDHGVLIVGYG S + P   K  PYWI+KNSWG  WG
Sbjct: 515 ANAMQFYRGGVSHPWSPLCSKKNLDHGVLIVGYGVSDY-PNFHKTLPYWIVKNSWGPRWG 573

Query: 339 ENGYYKICMGRNVCGVDSMVSS 360
           E GYY++  G N CGV  M +S
Sbjct: 574 EQGYYRVYRGDNTCGVSEMATS 595


>gi|291230041|ref|XP_002734978.1| PREDICTED: cysteine proteinase inhibitor-like [Saccoglossus
           kowalevskii]
          Length = 352

 Score =  257 bits (657), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 153/367 (41%), Positives = 206/367 (56%), Gaps = 29/367 (7%)

Query: 4   LILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSD----GEQSEDHLLNAEHHFSLFKSK 59
           + + +L+ + LS+V   + A+      I  V   D           +   +  F  F   
Sbjct: 1   MAILTLIAVFLSTVALGSQAIGPRTITINNVPMIDEIERNTNESGSVDKTQDLFQDFMKT 60

Query: 60  FSKTYATQEEHDYRFRVFKANLRRAKR-RQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNR 118
           + K Y T+EEH  R+++F+ NL +A+R +Q    T  +GVTKF DL+  EFR+ +L    
Sbjct: 61  YDKKYDTEEEHQLRYQIFQDNLLKAERLQQTEQATGQYGVTKFMDLSEEEFRKYYLTPVW 120

Query: 119 RLRLPADAQKAPILPTNDLPTDFDWRD--HGAVTGVKDQGACGSCWSFSATGALEGAHFL 176
           R   P   +KA I P    P  FDWRD    AVT VK+QG CGSCW+FS TG +EG   +
Sbjct: 121 RGSDP-HMKKAEI-PKGTPPAAFDWRDADKNAVTKVKNQGTCGSCWAFSTTGNIEGQWKI 178

Query: 177 STGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTG 236
             G LVSLSEQ+LVDCD           D GCNGGL ++A++ I++ GG+  E DYPYTG
Sbjct: 179 KKGTLVSLSEQELVDCD---------KLDQGCNGGLPSNAYQEIMRFGGIMSEDDYPYTG 229

Query: 237 TDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPY 296
            D   CK + +     ++    IS DE  MA+ L  +GP+++GINA  MQ Y GGVS P+
Sbjct: 230 RD-QDCKLNATLNKVYINGSMNISKDEGDMASWLAANGPISIGINANAMQFYFGGVSHPW 288

Query: 297 --ICG-KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCG 353
              C  + LDHGVLIVGYG+           PYWIIKNSWG +WG  GYY +  G  VCG
Sbjct: 289 KIFCNPENLDHGVLIVGYGTK-------DGTPYWIIKNSWGRSWGVEGYYLVYRGGGVCG 341

Query: 354 VDSMVSS 360
           ++ M +S
Sbjct: 342 LNEMCTS 348


>gi|308506829|ref|XP_003115597.1| CRE-TAG-196 protein [Caenorhabditis remanei]
 gi|308256132|gb|EFP00085.1| CRE-TAG-196 protein [Caenorhabditis remanei]
          Length = 475

 Score =  257 bits (656), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 147/349 (42%), Positives = 207/349 (59%), Gaps = 29/349 (8%)

Query: 22  VAVNDDDAM-IRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKAN 80
           + + DDD++ ++++  +   +  D+++   + F  F  +  K Y+ + E   RFR FK N
Sbjct: 142 IQLTDDDSITVQELRKAKIIRPRDYVI--WNSFLDFIDRHEKRYSNKREVLKRFRTFKKN 199

Query: 81  LRRAKRRQLLDP-TAVHGVTKFSDLTPSEFRRQFLGLNRRLRL----PADAQKAPI-LPT 134
            +  +  Q  +  TAV+G TKFSD+T  EF++  L       +     AD +K  I +  
Sbjct: 200 AKAIRELQKNEQGTAVYGFTKFSDMTTMEFKQTMLPYQWEQPVYPMDQADFEKEGITISE 259

Query: 135 NDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDH 194
            DLP  FDWRD GAVT VK+QG CGSCW+FS TG +EGA FL+  +LVSLSEQ+LVDCD 
Sbjct: 260 EDLPESFDWRDKGAVTQVKNQGNCGSCWAFSTTGNVEGAWFLAKNKLVSLSEQELVDCD- 318

Query: 195 ECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVS 254
                     D GCNGGL ++A++ I++ GG+E E  YPY G  G +C   +  IA  ++
Sbjct: 319 --------GVDQGCNGGLPSNAYKEIIRMGGLEPEDAYPYDGK-GETCHLVRKDIAVYIN 369

Query: 255 NFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPY--ICGKY-LDHGVLIVGY 311
               +  DE +M   LV  GP+++G+NA  +Q Y  GV  P+   C  + L+HGVLIVGY
Sbjct: 370 GSIELPHDEVEMQKWLVTKGPISIGLNANTLQFYRHGVVHPFKIFCEPFMLNHGVLIVGY 429

Query: 312 GSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSS 360
           G  G        KPYWI+KNSWG  WGE+GY+K+  G+NVCGV  M +S
Sbjct: 430 GKDG-------RKPYWIVKNSWGPTWGESGYFKLYRGKNVCGVQEMATS 471


>gi|196014793|ref|XP_002117255.1| hypothetical protein TRIADDRAFT_61245 [Trichoplax adhaerens]
 gi|190580220|gb|EDV20305.1| hypothetical protein TRIADDRAFT_61245 [Trichoplax adhaerens]
          Length = 353

 Score =  256 bits (655), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 146/341 (42%), Positives = 201/341 (58%), Gaps = 32/341 (9%)

Query: 31  IRQVVPSDGEQSEDHLLNAEHHFSLFKS------KFSKTYATQEEHDYRFRVFKANLRRA 84
           + Q+ P+    S+D    A HH  +FK+      +++K+Y   +E +YR++VF  N+ RA
Sbjct: 30  MMQLQPATRRFSQD---TATHHDPMFKNYLQFIKEYNKSYNNIQELNYRYQVFTKNMARA 86

Query: 85  KRRQLLD-PTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDW 143
              Q  D  T  +G TK SDLT  E +  F  + +  +     +KA I   N LP  FDW
Sbjct: 87  MLFQKHDNATGRYGFTKLSDLTDQEVK-SFYAMKKWPQQLYPTKKANIPQLNSLPQSFDW 145

Query: 144 RDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGS 203
           R  GAVT VKDQ  CG+CW+F+ TG +EG  +L+ G+L SLSEQ+LVDCD          
Sbjct: 146 RSKGAVTAVKDQKRCGACWAFATTGNIEGQWYLNKGKLYSLSEQELVDCD---------K 196

Query: 204 CDSGCNGGLMNSAFEYIL-KAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSD 262
            D GC GGL  +A+  I+ + GG+E EKDYPY   + G CK +KS+    +++   +S++
Sbjct: 197 IDEGCKGGLPLNAYHSIMNRLGGLETEKDYPYVAKN-GKCKLNKSEEVVYINSSVKVSTN 255

Query: 263 EDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYI--CG-KYLDHGVLIVGYGSSGFAPI 319
           E  +AA LV HGP+A+GIN+V M  Y GG++ P    C  K LDHGVLIVGYG       
Sbjct: 256 ETDLAAWLVAHGPVAIGINSVNMLHYKGGIAHPTNKDCNPKLLDHGVLIVGYGEE----- 310

Query: 320 RFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSS 360
             K  PYWIIKNSWG +WGE GYY++  G   CG++   +S
Sbjct: 311 --KSTPYWIIKNSWGTDWGEKGYYRVVRGIGACGLNKSATS 349


>gi|194898683|ref|XP_001978897.1| GG11133 [Drosophila erecta]
 gi|190650600|gb|EDV47855.1| GG11133 [Drosophila erecta]
          Length = 615

 Score =  256 bits (653), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 137/322 (42%), Positives = 193/322 (59%), Gaps = 19/322 (5%)

Query: 46  LLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDL 104
           L   +H F  F+ +F + Y +  E   R R+F+ NL+  +     +  +A +G+T+F+DL
Sbjct: 302 LDKVDHLFHKFQVRFGRRYVSTAERQMRLRIFRQNLKTIEELNTNEMGSAKYGITEFADL 361

Query: 105 TPSEFRRQFLGLNRRLRLPADAQKAPILPT--NDLPTDFDWRDHGAVTGVKDQGACGSCW 162
           T SE++ +  GL +R    A    A ++P    +LP +FDWR   AVT VK+QG+CGSCW
Sbjct: 362 TSSEYKER-TGLWQRDEAKATGGSAAVVPAYHGELPKEFDWRQKNAVTPVKNQGSCGSCW 420

Query: 163 SFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK 222
           +FS TG +EG + + TGEL   SEQ+L+DCD         + DS CNGGLM++A++ I  
Sbjct: 421 AFSVTGNIEGLYAVKTGELKEFSEQELLDCD---------TTDSACNGGLMDNAYKAIKD 471

Query: 223 AGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVGIN 281
            GG+E E +YPY       C F+++     V+ F  +   +E  M   L+  GP+++GIN
Sbjct: 472 IGGLEYEAEYPYKAKK-NQCHFNRTLSHVQVAGFVDLPKGNETAMQEWLLTKGPISIGIN 530

Query: 282 AVWMQTYIGGVSCPY--ICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWG 338
           A  MQ Y GGVS P+  +C K  LDHGVL+VGYG S + P   K  PYWI+KNSWG  WG
Sbjct: 531 ANAMQFYRGGVSHPWKALCSKKNLDHGVLVVGYGVSDY-PNFHKTLPYWIVKNSWGPRWG 589

Query: 339 ENGYYKICMGRNVCGVDSMVSS 360
           E GYY++  G N CGV  M +S
Sbjct: 590 EQGYYRVYRGDNTCGVSEMATS 611


>gi|328866896|gb|EGG15279.1| cysteine protease [Dictyostelium fasciculatum]
          Length = 347

 Score =  256 bits (653), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 143/323 (44%), Positives = 189/323 (58%), Gaps = 21/323 (6%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAV-------HGVTKFS 102
           E  F  F+ K++K Y + E    +F  FK NL R      L+  A         GV +F+
Sbjct: 24  EIQFRDFQVKYNKVYGSHE-FSQKFVTFKDNLNRIDT---LNANAAASGSDTKFGVNEFA 79

Query: 103 DLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDL---PTDFDWRDHGAVTGVKDQGACG 159
           DL+  EFR+ ++       +P+DAQ A       L   P+ FDWR  GAVT VK+QG CG
Sbjct: 80  DLSVQEFRKFYMNA-VPASVPSDAQVAGDYSDETLASIPSSFDWRTKGAVTPVKNQGQCG 138

Query: 160 SCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEE-SGSCDSGCNGGLMNSAFE 218
           SCWSFS TG +EG  FL+   L  LSEQ LVDCDH C   +   SCD GCNGGL  +AF+
Sbjct: 139 SCWSFSTTGNVEGQWFLAGNTLTGLSEQNLVDCDHHCMTYDGQQSCDDGCNGGLQPNAFQ 198

Query: 219 YILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAV 278
           YI+  GG++ E  YPY       C+F  S I A +SN+ ++S++E Q+AA L  +GP+++
Sbjct: 199 YIIGNGGIDTETSYPYLAVAQDKCQFKASNIGAKISNWQMLSTNETQIAAYLALNGPVSI 258

Query: 279 GINAVWMQTYIGGV-SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENW 337
             +A   Q YIGGV   P  CGK LDHG+LIVGY +     I    KPYW +KNSWG +W
Sbjct: 259 AADAAEWQFYIGGVFDLP--CGKALDHGILIVGYDTE--TNIFGHAKPYWWVKNSWGASW 314

Query: 338 GENGYYKICMGRNVCGVDSMVSS 360
           GE GY K+  G   CG+++ VS+
Sbjct: 315 GEQGYLKVLRGAGECGLNTFVST 337


>gi|71993922|ref|NP_505215.2| Protein TAG-196 [Caenorhabditis elegans]
 gi|351050011|emb|CCD64084.1| Protein TAG-196 [Caenorhabditis elegans]
          Length = 477

 Score =  255 bits (652), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 145/345 (42%), Positives = 204/345 (59%), Gaps = 28/345 (8%)

Query: 25  NDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRA 84
           +DD   ++++  +   +  D+++   + F  F  +  K Y  + E   RFRVFK N +  
Sbjct: 148 HDDSITVQELRKAKIIRPRDYVI--WNSFLDFVDRHEKKYTNKREVLKRFRVFKKNAKVI 205

Query: 85  KRRQLLDP-TAVHGVTKFSDLTPSEFRRQFLGLNRRLRL----PADAQKAPI-LPTNDLP 138
           +  Q  +  TAV+G TKFSD+T  EF++  L       +     A+ +K  + +   DLP
Sbjct: 206 RELQKNEQGTAVYGFTKFSDMTTMEFKKIMLPYQWEQPVYPMEQANFEKHDVTINEEDLP 265

Query: 139 TDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDP 198
             FDWR+ GAVT VK+QG CGSCW+FS TG +EGA F++  +LVSLSEQ+LVDCD     
Sbjct: 266 ESFDWREKGAVTQVKNQGNCGSCWAFSTTGNVEGAWFIAKNKLVSLSEQELVDCD----- 320

Query: 199 EESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSV 258
               S D GCNGGL ++A++ I++ GG+E E  YPY G  G +C   +  IA  ++    
Sbjct: 321 ----SMDQGCNGGLPSNAYKEIIRMGGLEPEDAYPYDGR-GETCHLVRKDIAVYINGSVE 375

Query: 259 ISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPY--ICGKY-LDHGVLIVGYGSSG 315
           +  DE +M   LV  GP+++G+NA  +Q Y  GV  P+   C  + L+HGVLIVGYG  G
Sbjct: 376 LPHDEVEMQKWLVTKGPISIGLNANTLQFYRHGVVHPFKIFCEPFMLNHGVLIVGYGKDG 435

Query: 316 FAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSS 360
                   KPYWI+KNSWG NWGE GY+K+  G+NVCGV  M +S
Sbjct: 436 -------RKPYWIVKNSWGPNWGEAGYFKLYRGKNVCGVQEMATS 473


>gi|357473429|ref|XP_003606999.1| Cysteine proteinase [Medicago truncatula]
 gi|355508054|gb|AES89196.1| Cysteine proteinase [Medicago truncatula]
          Length = 210

 Score =  255 bits (652), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 124/196 (63%), Positives = 152/196 (77%), Gaps = 6/196 (3%)

Query: 1   MERLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKF 60
           M+   L   ++L + SV A +     +D +IRQVV  +G +     L AEHHF+LFK KF
Sbjct: 1   MDHRTLLLFVVLFIFSVSAFSTPDEGEDPIIRQVVDEEGVR-----LGAEHHFNLFKHKF 55

Query: 61  SKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRL 120
            K Y++++EHDYRF++FK+NL RAKR QL+DP+AVHGVT+FSDLTP EFR+  LGL R +
Sbjct: 56  GKVYSSKDEHDYRFKIFKSNLNRAKRHQLMDPSAVHGVTRFSDLTPREFRKSVLGL-RGV 114

Query: 121 RLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGE 180
            LP DA  APILPT++LP DFDWR+ GAVT VK+QG+CGSCWSFS TGALEGAHFLSTG+
Sbjct: 115 GLPKDANAAPILPTDNLPKDFDWREKGAVTAVKNQGSCGSCWSFSTTGALEGAHFLSTGK 174

Query: 181 LVSLSEQQLVDCDHEC 196
           LVSLSEQQLVDCDHE 
Sbjct: 175 LVSLSEQQLVDCDHEV 190


>gi|24644155|ref|NP_730901.1| CG12163, isoform A [Drosophila melanogaster]
 gi|32699625|sp|Q9VN93.2|CPR1_DROME RecName: Full=Putative cysteine proteinase CG12163; Flags:
           Precursor
 gi|23170427|gb|AAF52055.2| CG12163, isoform A [Drosophila melanogaster]
 gi|27819876|gb|AAO24986.1| LP08529p [Drosophila melanogaster]
          Length = 614

 Score =  254 bits (650), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 135/318 (42%), Positives = 193/318 (60%), Gaps = 19/318 (5%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTPSE 108
           +H F  F+ +F + Y +  E   R R+F+ NL+  +     +  +A +G+T+F+D+T SE
Sbjct: 305 DHLFYKFQVRFGRRYVSTAERQMRLRIFRQNLKTIEELNANEMGSAKYGITEFADMTSSE 364

Query: 109 FRRQFLGLNRRLRLPADAQKAPILPT--NDLPTDFDWRDHGAVTGVKDQGACGSCWSFSA 166
           ++ +  GL +R    A    A ++P    +LP +FDWR   AVT VK+QG+CGSCW+FS 
Sbjct: 365 YKER-TGLWQRDEAKATGGSAAVVPAYHGELPKEFDWRQKDAVTQVKNQGSCGSCWAFSV 423

Query: 167 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGV 226
           TG +EG + + TGEL   SEQ+L+DCD         + DS CNGGLM++A++ I   GG+
Sbjct: 424 TGNIEGLYAVKTGELKEFSEQELLDCD---------TTDSACNGGLMDNAYKAIKDIGGL 474

Query: 227 EREKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVGINAVWM 285
           E E +YPY       C F+++     V+ F  +   +E  M   L+ +GP+++GINA  M
Sbjct: 475 EYEAEYPYKAKK-NQCHFNRTLSHVQVAGFVDLPKGNETAMQEWLLANGPISIGINANAM 533

Query: 286 QTYIGGVSCPY--ICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGY 342
           Q Y GGVS P+  +C K  LDHGVL+VGYG S + P   K  PYWI+KNSWG  WGE GY
Sbjct: 534 QFYRGGVSHPWKALCSKKNLDHGVLVVGYGVSDY-PNFHKTLPYWIVKNSWGPRWGEQGY 592

Query: 343 YKICMGRNVCGVDSMVSS 360
           Y++  G N CGV  M +S
Sbjct: 593 YRVYRGDNTCGVSEMATS 610


>gi|195343593|ref|XP_002038380.1| GM10654 [Drosophila sechellia]
 gi|194133401|gb|EDW54917.1| GM10654 [Drosophila sechellia]
          Length = 615

 Score =  254 bits (650), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 135/318 (42%), Positives = 193/318 (60%), Gaps = 19/318 (5%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTPSE 108
           +H F  F+ +F + Y +  E   R R+F+ NL+  +     +  +A +G+T+F+D+T SE
Sbjct: 306 DHLFYKFQVRFGRRYVSTAERQMRLRIFRQNLKTIEELNANEMGSAKYGITEFADMTSSE 365

Query: 109 FRRQFLGLNRRLRLPADAQKAPILPT--NDLPTDFDWRDHGAVTGVKDQGACGSCWSFSA 166
           ++ +  GL +R    A    A ++P    +LP +FDWR   AVT VK+QG+CGSCW+FS 
Sbjct: 366 YKER-TGLWQRDEAKATGGSAAVVPAYHGELPKEFDWRQKDAVTQVKNQGSCGSCWAFSV 424

Query: 167 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGV 226
           TG +EG + + TGEL   SEQ+L+DCD         + DS CNGGLM++A++ I   GG+
Sbjct: 425 TGNIEGLYAVKTGELKEFSEQELLDCD---------TTDSACNGGLMDNAYKAIKDIGGL 475

Query: 227 EREKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVGINAVWM 285
           E E +YPY       C F+++     V+ F  +   +E  M   L+ +GP+++GINA  M
Sbjct: 476 EYEAEYPYKAKK-NQCHFNRTLSHVQVAGFVDLPKGNETAMQEWLLTNGPISIGINANAM 534

Query: 286 QTYIGGVSCPY--ICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGY 342
           Q Y GGVS P+  +C K  LDHGVL+VGYG S + P   K  PYWI+KNSWG  WGE GY
Sbjct: 535 QFYRGGVSHPWKALCSKKNLDHGVLVVGYGVSDY-PNFHKTLPYWIVKNSWGPRWGEQGY 593

Query: 343 YKICMGRNVCGVDSMVSS 360
           Y++  G N CGV  M +S
Sbjct: 594 YRVYRGDNTCGVSEMATS 611


>gi|67773374|gb|AAY81944.1| cysteine protease 6 [Paragonimus westermani]
          Length = 325

 Score =  254 bits (650), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 137/317 (43%), Positives = 193/317 (60%), Gaps = 26/317 (8%)

Query: 48  NAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTP 106
           +A   +  FK  + K+YA  ++   RF +FK NL RA+  QL +  TA +GVT+FSDLTP
Sbjct: 27  SARELYEQFKRDYGKSYANDDDEK-RFAIFKDNLVRAQNYQLQEQGTARYGVTQFSDLTP 85

Query: 107 SEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSA 166
            EF  +FL      R     ++  +      P   DWR+ GAV  V+DQG+CGSCW+FS 
Sbjct: 86  EEFAAKFLSS----RFDDQVERVQLNDLKAAPESVDWRELGAVAPVEDQGSCGSCWAFSV 141

Query: 167 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGV 226
            G +EG  FL TG+LVSLS+QQLVDCD +         DSGC+GG   + +  I++ GG+
Sbjct: 142 AGNVEGQWFLKTGQLVSLSKQQLVDCDVQ---------DSGCDGGYPPTTYGEIIRMGGL 192

Query: 227 EREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQ 286
           E ++DYPY G +   CK D+SK+ A +++  V+ ++E + AA + +HGP++ GINAV +Q
Sbjct: 193 EAQRDYPYVGRE-QPCKLDESKLLAKINSSIVLEANEKKQAAYIAEHGPMSSGINAVTLQ 251

Query: 287 TYIGGVSCPYICG---KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYY 343
            Y  G+S P        +L+HGVL VGYG+           PYWIIKNSWG  WGE GY+
Sbjct: 252 FYQSGISHPSKSQCQPDWLNHGVLSVGYGTEDGV-------PYWIIKNSWGTGWGEKGYF 304

Query: 344 KICMGRNVCGVDSMVSS 360
           ++  G   CG++ +VSS
Sbjct: 305 RLYRGDGTCGIEKVVSS 321


>gi|268554660|ref|XP_002635317.1| C. briggsae CBR-TAG-196 protein [Caenorhabditis briggsae]
          Length = 477

 Score =  254 bits (650), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 143/346 (41%), Positives = 206/346 (59%), Gaps = 28/346 (8%)

Query: 24  VNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRR 83
            +DD   ++++  +   +  D+++   + F  F  +  K Y+ + E   RFR FK N + 
Sbjct: 147 THDDSITVQELRKAKIIRPRDYVI--WNSFLDFIDRHEKRYSNKREVLKRFRTFKKNAKV 204

Query: 84  AKRRQLLDP-TAVHGVTKFSDLTPSEFRRQFLGLNRRLRL----PADAQKAPI-LPTNDL 137
            +  Q  +  +AV+G TKFSD+T  EF++  L       +     AD +K  + +  +DL
Sbjct: 205 IRELQKNEQGSAVYGFTKFSDMTTMEFKQTMLPYQWEQPVYPMAEADFEKEGVTISEDDL 264

Query: 138 PTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECD 197
           P  FDWRDHGAVT VK+QG CGSCW+FS TG +EGA +L+  +LVSLSEQ+LVDCD    
Sbjct: 265 PDSFDWRDHGAVTQVKNQGNCGSCWAFSTTGNVEGAWYLAKKKLVSLSEQELVDCD---- 320

Query: 198 PEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFS 257
                S D GCNGGL ++A++ I++ GG+E E  YPY G  G +C   +  IA  ++   
Sbjct: 321 -----SVDQGCNGGLPSNAYKEIMRMGGLEPEDAYPYDGK-GETCHIVRKDIAVYINGSV 374

Query: 258 VISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPY--ICGKY-LDHGVLIVGYGSS 314
            +  DE ++   LV  GP+++G+NA  +Q Y  GV  P+   C  + L+HGVLIVGYG  
Sbjct: 375 ELPHDEVKIQKWLVTKGPISIGLNANTLQFYRHGVVHPFKIFCEPFMLNHGVLIVGYGKD 434

Query: 315 GFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSS 360
           G        KPYWI+KNSWG  WGE+GY+++  G+NVCGV  M +S
Sbjct: 435 G-------RKPYWIVKNSWGPTWGESGYFRLYRGKNVCGVQEMATS 473


>gi|24644153|ref|NP_649521.1| CG12163, isoform B [Drosophila melanogaster]
 gi|23170426|gb|AAN13266.1| CG12163, isoform B [Drosophila melanogaster]
 gi|378548248|gb|AFC17498.1| FI18603p1 [Drosophila melanogaster]
          Length = 475

 Score =  254 bits (649), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 135/318 (42%), Positives = 193/318 (60%), Gaps = 19/318 (5%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTPSE 108
           +H F  F+ +F + Y +  E   R R+F+ NL+  +     +  +A +G+T+F+D+T SE
Sbjct: 166 DHLFYKFQVRFGRRYVSTAERQMRLRIFRQNLKTIEELNANEMGSAKYGITEFADMTSSE 225

Query: 109 FRRQFLGLNRRLRLPADAQKAPILPT--NDLPTDFDWRDHGAVTGVKDQGACGSCWSFSA 166
           ++ +  GL +R    A    A ++P    +LP +FDWR   AVT VK+QG+CGSCW+FS 
Sbjct: 226 YKER-TGLWQRDEAKATGGSAAVVPAYHGELPKEFDWRQKDAVTQVKNQGSCGSCWAFSV 284

Query: 167 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGV 226
           TG +EG + + TGEL   SEQ+L+DCD         + DS CNGGLM++A++ I   GG+
Sbjct: 285 TGNIEGLYAVKTGELKEFSEQELLDCD---------TTDSACNGGLMDNAYKAIKDIGGL 335

Query: 227 EREKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVGINAVWM 285
           E E +YPY       C F+++     V+ F  +   +E  M   L+ +GP+++GINA  M
Sbjct: 336 EYEAEYPYKAKK-NQCHFNRTLSHVQVAGFVDLPKGNETAMQEWLLANGPISIGINANAM 394

Query: 286 QTYIGGVSCPY--ICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGY 342
           Q Y GGVS P+  +C K  LDHGVL+VGYG S + P   K  PYWI+KNSWG  WGE GY
Sbjct: 395 QFYRGGVSHPWKALCSKKNLDHGVLVVGYGVSDY-PNFHKTLPYWIVKNSWGPRWGEQGY 453

Query: 343 YKICMGRNVCGVDSMVSS 360
           Y++  G N CGV  M +S
Sbjct: 454 YRVYRGDNTCGVSEMATS 471


>gi|85068708|gb|ABC69434.1| cysteine protease [Clonorchis sinensis]
 gi|85068710|gb|ABC69435.1| cysteine protease [Clonorchis sinensis]
          Length = 328

 Score =  254 bits (649), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 150/365 (41%), Positives = 204/365 (55%), Gaps = 49/365 (13%)

Query: 3   RLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSK 62
           RL +  +L+  + S LA    V  D                    NA   +  FK K+ K
Sbjct: 2   RLFVCCVLVTTIWSALARTTQVEPD--------------------NARALYEEFKLKYKK 41

Query: 63  TYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTPSEFRRQFLGLNRRLR 121
           TY+  ++ + RF +FK NL RAKR Q ++  TA +GVT+FSDLT  EF+ ++L    R+R
Sbjct: 42  TYSNDDD-ELRFEIFKDNLLRAKRLQEMEQGTAQYGVTQFSDLTSEEFKTRYL----RMR 96

Query: 122 LPADAQKAPILPTNDLPTD---FDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLST 178
                    + P  D+  D   FDWR+HGAV  V DQG CGSCW+FS  G +EG  F  T
Sbjct: 97  FDGPIVSEDLTPEEDVTMDNEKFDWREHGAVGPVLDQGKCGSCWAFSVIGNVEGQWFRKT 156

Query: 179 GELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTD 238
           G+L++LSEQQLVDCDH          D GCNGG     +  I K GG+E   DYPYTG D
Sbjct: 157 GDLLALSEQQLVDCDH---------LDKGCNGGYPPKTYGEIEKMGGLELASDYPYTGVD 207

Query: 239 GGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGV--SCPY 296
            G C  ++SK  A V++ +V+   E   A  L + GPL+  +NAV +Q Y+GG+    P+
Sbjct: 208 -GICYMNQSKFVAYVNDSTVLPLSEKIQAQKLKEIGPLSSALNAVLLQFYLGGIIFPIPF 266

Query: 297 ICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVD 355
           +C  + L+H VL VGYG+  F        PYWI+KNSWG  +GE GY++I  G   CG++
Sbjct: 267 LCNPHGLNHAVLTVGYGTE-FG------IPYWIVKNSWGVGFGEKGYFRIFRGAGTCGIN 319

Query: 356 SMVSS 360
            +VS+
Sbjct: 320 LVVST 324


>gi|118429527|gb|ABK91811.1| cathepsin F precursor [Clonorchis sinensis]
          Length = 326

 Score =  254 bits (648), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 147/363 (40%), Positives = 200/363 (55%), Gaps = 47/363 (12%)

Query: 3   RLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSK 62
           RL +  +L+  + S LA    V  D                    NA   +  FK K+ K
Sbjct: 2   RLFVCCVLVTTIWSALARTTQVEPD--------------------NARALYEEFKLKYKK 41

Query: 63  TYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTPSEFRRQFLGLNRRLR 121
           TY+  ++ + RF +FK NL RAKR Q ++  TA +GVT+FSDLT  EF+ ++L    R+R
Sbjct: 42  TYSN-DDDELRFEIFKDNLLRAKRLQEMEQGTAQYGVTQFSDLTSEEFKTRYL----RMR 96

Query: 122 LPADAQKAPILPTNDLPTD---FDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLST 178
                    + P  D+  D   FDWR+HGAV  V DQG CGSCW+FS  G +EG  F  T
Sbjct: 97  FDGPIVSEDLTPEEDVTMDNEKFDWREHGAVGPVLDQGKCGSCWAFSVIGNVEGQWFRKT 156

Query: 179 GELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTD 238
           G+L++LSEQQLVDCD+          D GC+GG     +  I K GG+E   DYPYTG  
Sbjct: 157 GDLLALSEQQLVDCDY---------LDGGCDGGYPPQTYTAIQKMGGLELASDYPYTGV- 206

Query: 239 GGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYIC 298
           GG C  DKSK  A ++  +++   E   A  L   GPL+  +NA  +Q Y GG+  P +C
Sbjct: 207 GGICYMDKSKFVAYINGSTILPLSEKVQAQKLRAIGPLSSALNADTLQLYKGGIMRPRLC 266

Query: 299 GKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSM 357
               ++H VL VGYG           KPYWI+KNSWGE++GE GY++I  G   CG++S+
Sbjct: 267 DPAGVNHAVLTVGYGVQ-------NGKPYWIVKNSWGEDFGEEGYFRIYRGDGTCGINSI 319

Query: 358 VSS 360
           V++
Sbjct: 320 VTT 322


>gi|323713320|gb|ADY04414.1| cysteine protease [Clarkia xantiana var. xantiana]
          Length = 144

 Score =  254 bits (648), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 114/144 (79%), Positives = 133/144 (92%)

Query: 210 GGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAAN 269
           GGLMNSAFEY LKAGG+ +E+DYPYTGTD GSCKF+KSKIAA+V+NFSV+S DEDQ+AAN
Sbjct: 1   GGLMNSAFEYTLKAGGLMKEEDYPYTGTDKGSCKFEKSKIAASVANFSVVSHDEDQIAAN 60

Query: 270 LVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWII 329
           LVK+GPLA+ INAV+MQTY+GGVSCPYIC K LDHGVL+VGYGSSG++P+R KEKPYWII
Sbjct: 61  LVKNGPLAIAINAVFMQTYMGGVSCPYICSKRLDHGVLLVGYGSSGYSPVRMKEKPYWII 120

Query: 330 KNSWGENWGENGYYKICMGRNVCG 353
           KNSWG+ WGE G+YKIC GRN+CG
Sbjct: 121 KNSWGDKWGEEGFYKICRGRNICG 144


>gi|323713078|gb|ADY04293.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713086|gb|ADY04297.1| cysteine protease [Clarkia xantiana var. xantiana]
          Length = 144

 Score =  254 bits (648), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 114/144 (79%), Positives = 133/144 (92%)

Query: 210 GGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAAN 269
           GGLMNSAFEY LKAGG+ +E+DYPYTGTD GSCKF+KSKIAA+V+NFSV+S DEDQ+AAN
Sbjct: 1   GGLMNSAFEYTLKAGGLMKEEDYPYTGTDKGSCKFEKSKIAASVANFSVVSLDEDQIAAN 60

Query: 270 LVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWII 329
           LVK+GPLA+ INAV+MQTY+GGVSCPYIC K LDHGVL+VGYGSSG++P+R KEKPYWII
Sbjct: 61  LVKNGPLAIAINAVFMQTYMGGVSCPYICSKRLDHGVLLVGYGSSGYSPVRLKEKPYWII 120

Query: 330 KNSWGENWGENGYYKICMGRNVCG 353
           KNSWG+ WGE G+YKIC GRN+CG
Sbjct: 121 KNSWGDKWGEEGFYKICRGRNICG 144


>gi|323713016|gb|ADY04262.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713018|gb|ADY04263.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713020|gb|ADY04264.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713022|gb|ADY04265.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713024|gb|ADY04266.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713026|gb|ADY04267.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713030|gb|ADY04269.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713032|gb|ADY04270.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713034|gb|ADY04271.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713036|gb|ADY04272.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713038|gb|ADY04273.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713040|gb|ADY04274.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713042|gb|ADY04275.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713044|gb|ADY04276.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713046|gb|ADY04277.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713048|gb|ADY04278.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713050|gb|ADY04279.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713052|gb|ADY04280.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713054|gb|ADY04281.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713056|gb|ADY04282.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713058|gb|ADY04283.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713060|gb|ADY04284.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713062|gb|ADY04285.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713064|gb|ADY04286.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713066|gb|ADY04287.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713068|gb|ADY04288.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713070|gb|ADY04289.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713072|gb|ADY04290.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713074|gb|ADY04291.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713076|gb|ADY04292.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713080|gb|ADY04294.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713084|gb|ADY04296.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713088|gb|ADY04298.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713090|gb|ADY04299.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713092|gb|ADY04300.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713094|gb|ADY04301.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713096|gb|ADY04302.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713098|gb|ADY04303.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713100|gb|ADY04304.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713102|gb|ADY04305.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713104|gb|ADY04306.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713106|gb|ADY04307.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713108|gb|ADY04308.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713110|gb|ADY04309.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713112|gb|ADY04310.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713114|gb|ADY04311.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713116|gb|ADY04312.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713118|gb|ADY04313.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713120|gb|ADY04314.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713122|gb|ADY04315.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713124|gb|ADY04316.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713126|gb|ADY04317.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713128|gb|ADY04318.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713130|gb|ADY04319.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713132|gb|ADY04320.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713134|gb|ADY04321.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713136|gb|ADY04322.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713138|gb|ADY04323.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713140|gb|ADY04324.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713142|gb|ADY04325.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713144|gb|ADY04326.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713146|gb|ADY04327.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713148|gb|ADY04328.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713150|gb|ADY04329.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713152|gb|ADY04330.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713154|gb|ADY04331.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713156|gb|ADY04332.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713158|gb|ADY04333.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713160|gb|ADY04334.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713162|gb|ADY04335.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713166|gb|ADY04337.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713168|gb|ADY04338.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713170|gb|ADY04339.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713172|gb|ADY04340.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713174|gb|ADY04341.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713180|gb|ADY04344.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713182|gb|ADY04345.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713184|gb|ADY04346.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713186|gb|ADY04347.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713188|gb|ADY04348.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713190|gb|ADY04349.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713192|gb|ADY04350.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713194|gb|ADY04351.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713196|gb|ADY04352.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713198|gb|ADY04353.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713200|gb|ADY04354.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713202|gb|ADY04355.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713204|gb|ADY04356.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713206|gb|ADY04357.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713212|gb|ADY04360.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713216|gb|ADY04362.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713218|gb|ADY04363.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713220|gb|ADY04364.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713222|gb|ADY04365.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713224|gb|ADY04366.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713226|gb|ADY04367.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713230|gb|ADY04369.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713232|gb|ADY04370.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713234|gb|ADY04371.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713236|gb|ADY04372.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713238|gb|ADY04373.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713240|gb|ADY04374.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713246|gb|ADY04377.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713248|gb|ADY04378.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713250|gb|ADY04379.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713252|gb|ADY04380.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713254|gb|ADY04381.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713256|gb|ADY04382.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713258|gb|ADY04383.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713260|gb|ADY04384.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713262|gb|ADY04385.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713264|gb|ADY04386.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713266|gb|ADY04387.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713268|gb|ADY04388.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713270|gb|ADY04389.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713274|gb|ADY04391.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713276|gb|ADY04392.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713278|gb|ADY04393.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713280|gb|ADY04394.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713282|gb|ADY04395.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713284|gb|ADY04396.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713286|gb|ADY04397.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713288|gb|ADY04398.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713290|gb|ADY04399.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713292|gb|ADY04400.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713294|gb|ADY04401.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713296|gb|ADY04402.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713298|gb|ADY04403.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713300|gb|ADY04404.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713302|gb|ADY04405.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713304|gb|ADY04406.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713306|gb|ADY04407.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713308|gb|ADY04408.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713310|gb|ADY04409.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713312|gb|ADY04410.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713314|gb|ADY04411.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713316|gb|ADY04412.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713318|gb|ADY04413.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713322|gb|ADY04415.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713324|gb|ADY04416.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713326|gb|ADY04417.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713328|gb|ADY04418.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713330|gb|ADY04419.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713332|gb|ADY04420.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713334|gb|ADY04421.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713336|gb|ADY04422.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713338|gb|ADY04423.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713340|gb|ADY04424.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713342|gb|ADY04425.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713344|gb|ADY04426.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713346|gb|ADY04427.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713348|gb|ADY04428.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713350|gb|ADY04429.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713352|gb|ADY04430.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713354|gb|ADY04431.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713356|gb|ADY04432.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713358|gb|ADY04433.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713360|gb|ADY04434.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713362|gb|ADY04435.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713364|gb|ADY04436.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713366|gb|ADY04437.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713368|gb|ADY04438.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713370|gb|ADY04439.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713372|gb|ADY04440.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713374|gb|ADY04441.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713376|gb|ADY04442.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713378|gb|ADY04443.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713380|gb|ADY04444.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713382|gb|ADY04445.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713384|gb|ADY04446.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713386|gb|ADY04447.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713388|gb|ADY04448.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713390|gb|ADY04449.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713392|gb|ADY04450.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713394|gb|ADY04451.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713396|gb|ADY04452.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713398|gb|ADY04453.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713400|gb|ADY04454.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713402|gb|ADY04455.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713404|gb|ADY04456.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713408|gb|ADY04458.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713410|gb|ADY04459.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713412|gb|ADY04460.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713414|gb|ADY04461.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713416|gb|ADY04462.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713418|gb|ADY04463.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713420|gb|ADY04464.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713422|gb|ADY04465.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713424|gb|ADY04466.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713426|gb|ADY04467.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713428|gb|ADY04468.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713430|gb|ADY04469.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713432|gb|ADY04470.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713434|gb|ADY04471.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713436|gb|ADY04472.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713438|gb|ADY04473.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713440|gb|ADY04474.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713442|gb|ADY04475.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713444|gb|ADY04476.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713448|gb|ADY04478.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713454|gb|ADY04481.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713458|gb|ADY04483.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713460|gb|ADY04484.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713462|gb|ADY04485.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713464|gb|ADY04486.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713466|gb|ADY04487.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713468|gb|ADY04488.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713470|gb|ADY04489.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713474|gb|ADY04491.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713478|gb|ADY04493.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713494|gb|ADY04501.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713496|gb|ADY04502.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713498|gb|ADY04503.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713500|gb|ADY04504.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713502|gb|ADY04505.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713504|gb|ADY04506.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713506|gb|ADY04507.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713508|gb|ADY04508.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713510|gb|ADY04509.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713512|gb|ADY04510.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713514|gb|ADY04511.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713516|gb|ADY04512.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713518|gb|ADY04513.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713520|gb|ADY04514.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713522|gb|ADY04515.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713524|gb|ADY04516.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713526|gb|ADY04517.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713528|gb|ADY04518.1| cysteine protease [Clarkia xantiana var. xantiana]
          Length = 144

 Score =  254 bits (648), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 114/144 (79%), Positives = 133/144 (92%)

Query: 210 GGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAAN 269
           GGLMNSAFEY LKAGG+ +E+DYPYTGTD GSCKF+KSKIAA+V+NFSV+S DEDQ+AAN
Sbjct: 1   GGLMNSAFEYTLKAGGLMKEEDYPYTGTDKGSCKFEKSKIAASVANFSVVSLDEDQIAAN 60

Query: 270 LVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWII 329
           LVK+GPLA+ INAV+MQTY+GGVSCPYIC K LDHGVL+VGYGSSG++P+R KEKPYWII
Sbjct: 61  LVKNGPLAIAINAVFMQTYMGGVSCPYICSKRLDHGVLLVGYGSSGYSPVRMKEKPYWII 120

Query: 330 KNSWGENWGENGYYKICMGRNVCG 353
           KNSWG+ WGE G+YKIC GRN+CG
Sbjct: 121 KNSWGDKWGEEGFYKICRGRNICG 144


>gi|323713210|gb|ADY04359.1| cysteine protease [Clarkia xantiana var. xantiana]
          Length = 144

 Score =  253 bits (647), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 114/144 (79%), Positives = 133/144 (92%)

Query: 210 GGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAAN 269
           GGLMNSAFEY LKAGG+ +E+DYPYTGTD GSCKF+KSKIAA+V+NFSV+S DEDQ+AAN
Sbjct: 1   GGLMNSAFEYTLKAGGLMKEEDYPYTGTDKGSCKFEKSKIAASVANFSVVSLDEDQIAAN 60

Query: 270 LVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWII 329
           LVK+GPLA+ INAV+MQTY+GGVSCPYIC K LDHGVL+VGYGSSG++P+R KEKPYWII
Sbjct: 61  LVKNGPLAIAINAVFMQTYMGGVSCPYICSKRLDHGVLLVGYGSSGYSPVRMKEKPYWII 120

Query: 330 KNSWGENWGENGYYKICMGRNVCG 353
           KNSWG+ WGE G+YKIC GRN+CG
Sbjct: 121 KNSWGDRWGEEGFYKICRGRNICG 144


>gi|323713176|gb|ADY04342.1| cysteine protease [Clarkia xantiana var. xantiana]
          Length = 144

 Score =  253 bits (647), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 114/144 (79%), Positives = 132/144 (91%)

Query: 210 GGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAAN 269
           GGLMNSAFEY LK GG+ +E+DYPYTGTD GSCKF+KSKIAAAV+NFSV+S DEDQ+AAN
Sbjct: 1   GGLMNSAFEYTLKTGGLMKEEDYPYTGTDKGSCKFEKSKIAAAVANFSVVSLDEDQIAAN 60

Query: 270 LVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWII 329
           LVK+GPLA+ INAV+MQTY+GGVSCPYIC K LDHGVL+VGYGSSG++P+R KEKPYWII
Sbjct: 61  LVKNGPLAIAINAVFMQTYMGGVSCPYICSKRLDHGVLLVGYGSSGYSPVRMKEKPYWII 120

Query: 330 KNSWGENWGENGYYKICMGRNVCG 353
           KNSWG+ WGE G+YKIC GRN+CG
Sbjct: 121 KNSWGDKWGEEGFYKICRGRNICG 144


>gi|323713456|gb|ADY04482.1| cysteine protease [Clarkia xantiana var. xantiana]
          Length = 144

 Score =  253 bits (647), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 114/144 (79%), Positives = 133/144 (92%)

Query: 210 GGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAAN 269
           GGLMNSAFEY LKAGG+ +E+DYPYTGTD GSCKF+KSKIAA+V+NFSV+S DEDQ+AAN
Sbjct: 1   GGLMNSAFEYTLKAGGLMKEEDYPYTGTDKGSCKFEKSKIAASVANFSVVSLDEDQIAAN 60

Query: 270 LVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWII 329
           LVK+GPLA+ INAV+MQTY+GGVSCPYIC K LDHGVL+VGYGSSG++P+R KEKPYWII
Sbjct: 61  LVKNGPLAIAINAVFMQTYMGGVSCPYICSKRLDHGVLLVGYGSSGYSPVRVKEKPYWII 120

Query: 330 KNSWGENWGENGYYKICMGRNVCG 353
           KNSWG+ WGE G+YKIC GRN+CG
Sbjct: 121 KNSWGDKWGEEGFYKICRGRNICG 144


>gi|323713228|gb|ADY04368.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713242|gb|ADY04375.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713244|gb|ADY04376.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713272|gb|ADY04390.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713446|gb|ADY04477.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713450|gb|ADY04479.1| cysteine protease [Clarkia xantiana var. xantiana]
          Length = 144

 Score =  253 bits (646), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 114/144 (79%), Positives = 132/144 (91%)

Query: 210 GGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAAN 269
           GGLMNSAFEY LKAGG+ +E+DYPYTGTD GSCKF+KSKIAA+V+NFSV+S DEDQ+AAN
Sbjct: 1   GGLMNSAFEYTLKAGGLMKEEDYPYTGTDKGSCKFEKSKIAASVANFSVVSLDEDQIAAN 60

Query: 270 LVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWII 329
           LVK+GPLA+ INAV+MQTY+GGVSCPYIC K LDHGVL+VGYGSSG++P+R KEKPYWII
Sbjct: 61  LVKNGPLAIAINAVFMQTYMGGVSCPYICSKRLDHGVLLVGYGSSGYSPVRMKEKPYWII 120

Query: 330 KNSWGENWGENGYYKICMGRNVCG 353
           KNSWG  WGE G+YKIC GRN+CG
Sbjct: 121 KNSWGNKWGEEGFYKICRGRNICG 144


>gi|323713208|gb|ADY04358.1| cysteine protease [Clarkia xantiana var. xantiana]
          Length = 144

 Score =  253 bits (645), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 113/144 (78%), Positives = 133/144 (92%)

Query: 210 GGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAAN 269
           GGLMNSAFEY LKAGG+ +E+DYPYTGTD GSCKF+KSKIAA+V+NFSV+S DEDQ+AAN
Sbjct: 1   GGLMNSAFEYTLKAGGLMKEEDYPYTGTDKGSCKFEKSKIAASVANFSVVSLDEDQIAAN 60

Query: 270 LVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWII 329
           LVK+GPLA+ INAV+MQTY+GGVSCPYIC K LDHGVL+VGYG+SG++P+R KEKPYWII
Sbjct: 61  LVKNGPLAIAINAVFMQTYMGGVSCPYICSKRLDHGVLLVGYGTSGYSPVRMKEKPYWII 120

Query: 330 KNSWGENWGENGYYKICMGRNVCG 353
           KNSWG+ WGE G+YKIC GRN+CG
Sbjct: 121 KNSWGDKWGEEGFYKICRGRNICG 144


>gi|323713452|gb|ADY04480.1| cysteine protease [Clarkia xantiana var. xantiana]
          Length = 144

 Score =  252 bits (644), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 113/144 (78%), Positives = 133/144 (92%)

Query: 210 GGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAAN 269
           GGLMNSAFEY LKAGG+ +E+DYPYTGTD GSCKF+KSKIAA+V+NFSV+S DEDQ+AAN
Sbjct: 1   GGLMNSAFEYTLKAGGLMKEEDYPYTGTDKGSCKFEKSKIAASVANFSVVSLDEDQIAAN 60

Query: 270 LVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWII 329
           LVK+GPLA+ INAV+MQTY+GGVSCPYIC K LDHGVL+VGYGSSG++P++ KEKPYWII
Sbjct: 61  LVKNGPLAIAINAVFMQTYMGGVSCPYICSKRLDHGVLLVGYGSSGYSPVKMKEKPYWII 120

Query: 330 KNSWGENWGENGYYKICMGRNVCG 353
           KNSWG+ WGE G+YKIC GRN+CG
Sbjct: 121 KNSWGDKWGEEGFYKICRGRNICG 144


>gi|323713164|gb|ADY04336.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713178|gb|ADY04343.1| cysteine protease [Clarkia xantiana var. xantiana]
          Length = 144

 Score =  252 bits (644), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 113/144 (78%), Positives = 132/144 (91%)

Query: 210 GGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAAN 269
           GGLMNSAFEY LK GG+ +E+DYPYTGTD GSCKF+KSKIAA+V+NFSV+S DEDQ+AAN
Sbjct: 1   GGLMNSAFEYTLKTGGLMKEEDYPYTGTDKGSCKFEKSKIAASVANFSVVSLDEDQIAAN 60

Query: 270 LVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWII 329
           LVK+GPLA+ INAV+MQTY+GGVSCPYIC K LDHGVL+VGYGSSG++P+R KEKPYWII
Sbjct: 61  LVKNGPLAIAINAVFMQTYMGGVSCPYICSKRLDHGVLLVGYGSSGYSPVRMKEKPYWII 120

Query: 330 KNSWGENWGENGYYKICMGRNVCG 353
           KNSWG+ WGE G+YKIC GRN+CG
Sbjct: 121 KNSWGDKWGEEGFYKICRGRNICG 144


>gi|118429515|gb|ABK91805.1| cysteine proteinase 7 precursor [Clonorchis sinensis]
          Length = 326

 Score =  252 bits (644), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 147/363 (40%), Positives = 199/363 (54%), Gaps = 47/363 (12%)

Query: 3   RLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSK 62
           RL +  +L+  + S LA    V  D                    NA   +  FK K+ K
Sbjct: 2   RLFVCCVLVTTIWSALARTTQVEPD--------------------NARALYEEFKLKYKK 41

Query: 63  TYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTPSEFRRQFLGLNRRLR 121
           TY+  ++ + RF +FK NL RAKR Q ++  TA +GVT+FSDLT  EF+ ++L    R+R
Sbjct: 42  TYSN-DDDELRFEIFKDNLLRAKRLQEMEQGTAQYGVTQFSDLTSEEFKTRYL----RMR 96

Query: 122 LPADAQKAPILPTNDLPTD---FDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLST 178
                    + P  D+  D   FDWR+HGAV  V DQG CGSCW+FS  G +EG  F  T
Sbjct: 97  FDGPIVSEDLTPEEDVTMDNEKFDWREHGAVGPVLDQGKCGSCWAFSVIGNVEGQWFRKT 156

Query: 179 GELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTD 238
           G+L++LSEQQLVDCD+          D GC+GG     +  I K GG+E   DYPYTG  
Sbjct: 157 GDLLALSEQQLVDCDY---------LDGGCDGGYPPQTYTAIQKMGGLELASDYPYTGV- 206

Query: 239 GGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYIC 298
           GG C  DKSK  A ++  +++   E   A  L   GPL+  +NA  +Q Y GG+  P  C
Sbjct: 207 GGICYMDKSKFVAYINGSTILPLSEKVQAQKLRAIGPLSSALNADTLQLYKGGIMRPKWC 266

Query: 299 GKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSM 357
               ++H VL VGYG           KPYWI+KNSWGE++GE GY++I  G   CG++S+
Sbjct: 267 DPAGVNHAVLTVGYGVQ-------NGKPYWIVKNSWGEDFGEEGYFRIYRGDGTCGINSI 319

Query: 358 VSS 360
           V++
Sbjct: 320 VTT 322


>gi|371781479|emb|CCA95098.1| putative responsive to dehydration 19, partial [Liriodendron
           tulipifera]
          Length = 150

 Score =  252 bits (643), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 115/147 (78%), Positives = 135/147 (91%), Gaps = 1/147 (0%)

Query: 203 SCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSD 262
           SCD+GCNGGLM SAF+Y LK+GG+E+E+DYPYTG DG +CKF+KSKIAA+  N++V+S D
Sbjct: 4   SCDAGCNGGLMTSAFKYTLKSGGLEKEEDYPYTGKDGATCKFEKSKIAASALNYTVVSID 63

Query: 263 EDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGK-YLDHGVLIVGYGSSGFAPIRF 321
           EDQ+AANLVK GPLAVGINAV+MQTYIGGVSCPYIC K  LDHGVL+VGYG++G+APIRF
Sbjct: 64  EDQIAANLVKFGPLAVGINAVFMQTYIGGVSCPYICSKRLLDHGVLLVGYGAAGYAPIRF 123

Query: 322 KEKPYWIIKNSWGENWGENGYYKICMG 348
           K+KPYWIIKNSWGE+WGENGYYKIC G
Sbjct: 124 KDKPYWIIKNSWGESWGENGYYKICRG 150


>gi|323713214|gb|ADY04361.1| cysteine protease [Clarkia xantiana var. xantiana]
          Length = 144

 Score =  252 bits (643), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 113/144 (78%), Positives = 132/144 (91%)

Query: 210 GGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAAN 269
           GGLMNSAFEY LKAG + +E+DYPYTGTD GSCKF+KSKIAA+V+NFSV+S DEDQ+AAN
Sbjct: 1   GGLMNSAFEYTLKAGALMKEEDYPYTGTDKGSCKFEKSKIAASVANFSVVSLDEDQIAAN 60

Query: 270 LVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWII 329
           LVK+GPLA+ INAV+MQTY+GGVSCPYIC K LDHGVL+VGYGSSG++P+R KEKPYWII
Sbjct: 61  LVKNGPLAIAINAVFMQTYMGGVSCPYICSKRLDHGVLLVGYGSSGYSPVRMKEKPYWII 120

Query: 330 KNSWGENWGENGYYKICMGRNVCG 353
           KNSWG+ WGE G+YKIC GRN+CG
Sbjct: 121 KNSWGDKWGEEGFYKICRGRNICG 144


>gi|323713406|gb|ADY04457.1| cysteine protease [Clarkia xantiana var. xantiana]
          Length = 144

 Score =  252 bits (643), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 113/144 (78%), Positives = 132/144 (91%)

Query: 210 GGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAAN 269
           GGLMNSAFEY LKAGG+ +E+DYPYTGTD GSCKF+KSKI A+V+NFSV+S DEDQ+AAN
Sbjct: 1   GGLMNSAFEYTLKAGGLMKEEDYPYTGTDKGSCKFEKSKIVASVANFSVVSLDEDQIAAN 60

Query: 270 LVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWII 329
           LVK+GPLA+ INAV+MQTY+GGVSCPYIC K LDHGVL+VGYGSSG++P+R KEKPYWII
Sbjct: 61  LVKNGPLAIAINAVFMQTYMGGVSCPYICSKRLDHGVLLVGYGSSGYSPVRMKEKPYWII 120

Query: 330 KNSWGENWGENGYYKICMGRNVCG 353
           KNSWG+ WGE G+YKIC GRN+CG
Sbjct: 121 KNSWGDKWGEEGFYKICRGRNICG 144


>gi|323713028|gb|ADY04268.1| cysteine protease [Clarkia xantiana var. xantiana]
          Length = 144

 Score =  251 bits (642), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 113/144 (78%), Positives = 133/144 (92%)

Query: 210 GGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAAN 269
           GGLMNSAFEY LKAGG+ +E+DYPYTGTD GSCKF+KSKIAA+V+NFSV+S DEDQ+AAN
Sbjct: 1   GGLMNSAFEYTLKAGGLMKEEDYPYTGTDKGSCKFEKSKIAASVANFSVVSLDEDQIAAN 60

Query: 270 LVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWII 329
           LVK+GPLA+ INAV+MQTY+GGVSCPYIC K LDHGVL+VGYGSSG++P+R KEKP+WII
Sbjct: 61  LVKNGPLAIAINAVFMQTYMGGVSCPYICSKRLDHGVLLVGYGSSGYSPVRMKEKPHWII 120

Query: 330 KNSWGENWGENGYYKICMGRNVCG 353
           KNSWG+ WGE G+YKIC GRN+CG
Sbjct: 121 KNSWGDKWGEEGFYKICRGRNICG 144


>gi|4760897|gb|AAD29130.1| cysteine proteinase 1 precursor [Clonorchis sinensis]
          Length = 328

 Score =  251 bits (642), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 150/365 (41%), Positives = 202/365 (55%), Gaps = 49/365 (13%)

Query: 3   RLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSK 62
           RL +  +L+  + S LA    V  D                    NA   +  FK K+ K
Sbjct: 2   RLFVCCVLVTTIWSALARTTQVEPD--------------------NARALYEEFKLKYKK 41

Query: 63  TYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTPSEFRRQFLGLNRRLR 121
           TY+  ++ + RF +FK NL RAKR Q ++  TA +GVT+FSDLT  EF+ ++L    R+R
Sbjct: 42  TYSNDDD-ELRFEIFKDNLLRAKRLQEMEQGTAQYGVTQFSDLTSEEFKTRYL----RMR 96

Query: 122 LPADAQKAPILPTNDLPTD---FDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLST 178
                      P  D+  D   FDWR+HGAV  V DQG CGSCW+FS  G +EG  F  T
Sbjct: 97  FDGPIVSEDPSPEEDVTMDNEKFDWREHGAVGPVLDQGKCGSCWAFSVIGNVEGQWFRKT 156

Query: 179 GELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTD 238
           G+L++LSEQQLVDCDH          D GCNGG     +  I K GG+E   DYPYTG D
Sbjct: 157 GDLLALSEQQLVDCDH---------LDKGCNGGYPPKTYGEIEKMGGLELASDYPYTGVD 207

Query: 239 GGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGV--SCPY 296
            G C  ++SK  A V+  +V+   E   A  L + GPL+  +NAV +Q Y+GG+    P+
Sbjct: 208 -GICYMNQSKFVAYVNESTVLPLSEKIQAQKLKEIGPLSSALNAVLLQFYLGGIIFPIPF 266

Query: 297 ICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVD 355
           +C  + L+H VL VGYG+  F        PYWI+KNSWG  +GE GY++I  G   CG++
Sbjct: 267 LCNPHGLNHAVLTVGYGTE-FG------IPYWIVKNSWGVGFGEKGYFRIFRGAGTCGIN 319

Query: 356 SMVSS 360
            +VS+
Sbjct: 320 LVVST 324


>gi|7219908|gb|AAF40479.1| cystein protease [Clonorchis sinensis]
          Length = 326

 Score =  251 bits (641), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 148/363 (40%), Positives = 198/363 (54%), Gaps = 47/363 (12%)

Query: 3   RLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSK 62
           RL +  +L+  + S LA    V  D                    NA   +  FK K+ K
Sbjct: 2   RLFVCCVLVTTIWSALARTTQVEPD--------------------NARALYEEFKLKYKK 41

Query: 63  TYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTPSEFRRQFLGLNRRLR 121
           TY+  ++ + RF +FK NL RAKR Q ++  TA +GVT+FSDLT  EF+ ++L    R+R
Sbjct: 42  TYSNDDD-ELRFEIFKDNLLRAKRLQEMEQGTAQYGVTQFSDLTSEEFKTRYL----RMR 96

Query: 122 LPADAQKAPILPTNDLPTD---FDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLST 178
                    + P  D+  D   FDWR+HGAV  V DQG CGSCW+FS  G + G  F  T
Sbjct: 97  FDGPIVSEDLTPEEDVTMDNEKFDWREHGAVGPVLDQGKCGSCWAFSVIGNVVGQWFRKT 156

Query: 179 GELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTD 238
           G L++LSEQQLVDCD+          D GC+GG     +  I K GG+E   DYPYTG  
Sbjct: 157 GHLLALSEQQLVDCDY---------LDDGCDGGYPPQTYTAIQKMGGLELASDYPYTGV- 206

Query: 239 GGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYIC 298
           GG C  DKSK  A V+  +++   E   A  L   GPL+  +NA  +Q Y GG+  P  C
Sbjct: 207 GGICHMDKSKFVAYVNGSTILPLSEKVQAQKLRAIGPLSSALNADTLQLYKGGIMRPKWC 266

Query: 299 GKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSM 357
               ++HGVL VGYG           KPYWI+KNSWGE++GE GY++I  G   CG++S+
Sbjct: 267 DPAGVNHGVLTVGYGVQ-------NGKPYWIVKNSWGEDFGEEGYFRIYRGDGTCGINSI 319

Query: 358 VSS 360
           V++
Sbjct: 320 VTT 322


>gi|323713082|gb|ADY04295.1| cysteine protease [Clarkia xantiana var. xantiana]
          Length = 144

 Score =  251 bits (641), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 113/144 (78%), Positives = 132/144 (91%)

Query: 210 GGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAAN 269
           GGLMNSAFEY LKAGG+ +E+DYPYTGTD GSCKF+KSKIAA+V+NFSV+S DEDQ+AAN
Sbjct: 1   GGLMNSAFEYTLKAGGLMKEEDYPYTGTDKGSCKFEKSKIAASVANFSVVSLDEDQIAAN 60

Query: 270 LVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWII 329
           LVK+GPLA+ INAV+MQTY+GGVSCPYIC K LDHGVL+VGYGSSG++P+  KEKPYWII
Sbjct: 61  LVKNGPLAIAINAVFMQTYMGGVSCPYICSKRLDHGVLLVGYGSSGYSPVSMKEKPYWII 120

Query: 330 KNSWGENWGENGYYKICMGRNVCG 353
           KNSWG+ WGE G+YKIC GRN+CG
Sbjct: 121 KNSWGDKWGEEGFYKICRGRNICG 144


>gi|198453932|ref|XP_002137768.1| GA27408, isoform A [Drosophila pseudoobscura pseudoobscura]
 gi|198132577|gb|EDY68326.1| GA27408, isoform A [Drosophila pseudoobscura pseudoobscura]
          Length = 629

 Score =  251 bits (641), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 134/322 (41%), Positives = 190/322 (59%), Gaps = 19/322 (5%)

Query: 46  LLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDL 104
           L   +H F  F+ +F + Y    E   R R+F+ NL+  +     +  +A +G+T+F+D+
Sbjct: 316 LDKVDHLFHKFQIRFGRRYDNTAERQMRLRIFRQNLKTIEELNTNEMGSAKYGITEFADM 375

Query: 105 TPSEFRRQFLGLNRRLRLPADAQKAPILPT--NDLPTDFDWRDHGAVTGVKDQGACGSCW 162
           T +E++ +  GL +R           ++P    + P +FDWR   AVT VK+QG+CGSCW
Sbjct: 376 TSTEYKER-TGLWQRDEQKPTGGAPAVVPAYEGEFPKEFDWRQKNAVTPVKNQGSCGSCW 434

Query: 163 SFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK 222
           +FS TG +EG + + TGEL   SEQ+L+DCD         + DS CNGGLM++A++ I  
Sbjct: 435 AFSVTGNIEGLYAVKTGELKEFSEQELLDCD---------TTDSACNGGLMDNAYKAIKD 485

Query: 223 AGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVGIN 281
            GG+E E +YPY       C F+++     VS F  +   +E  M   L+ HGP+++G+N
Sbjct: 486 IGGLEYEAEYPYEAKK-QQCHFNRTLSHVQVSGFVDLPKGNETAMQEWLLTHGPISIGLN 544

Query: 282 AVWMQTYIGGVSCPY--ICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWG 338
           A  MQ Y GGVS P+  +C K  LDHGVLIVGYG S + P   K  PYWI+KNSWG  WG
Sbjct: 545 ANAMQFYRGGVSHPWKALCSKKNLDHGVLIVGYGVSDY-PNFHKTLPYWIVKNSWGPRWG 603

Query: 339 ENGYYKICMGRNVCGVDSMVSS 360
           E GYY++  G N CGV  M +S
Sbjct: 604 EQGYYRVYRGDNTCGVSEMATS 625


>gi|195152617|ref|XP_002017233.1| GL22196 [Drosophila persimilis]
 gi|194112290|gb|EDW34333.1| GL22196 [Drosophila persimilis]
          Length = 627

 Score =  251 bits (640), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 134/322 (41%), Positives = 190/322 (59%), Gaps = 19/322 (5%)

Query: 46  LLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDL 104
           L   +H F  F+ +F + Y    E   R R+F+ NL+  +     +  +A +G+T+F+D+
Sbjct: 314 LDKVDHLFHKFQIRFGRRYDNTAERQMRLRIFRQNLKTIEELNTNEMGSAKYGITEFADM 373

Query: 105 TPSEFRRQFLGLNRRLRLPADAQKAPILPT--NDLPTDFDWRDHGAVTGVKDQGACGSCW 162
           T +E++ +  GL +R           ++P    + P +FDWR   AVT VK+QG+CGSCW
Sbjct: 374 TSTEYKER-TGLWQRDEQKPTGGAPAVVPAYEGEFPKEFDWRQKNAVTPVKNQGSCGSCW 432

Query: 163 SFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK 222
           +FS TG +EG + + TGEL   SEQ+L+DCD         + DS CNGGLM++A++ I  
Sbjct: 433 AFSVTGNIEGLYAVKTGELKEFSEQELLDCD---------TTDSACNGGLMDNAYKAIKD 483

Query: 223 AGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVGIN 281
            GG+E E +YPY       C F+++     VS F  +   +E  M   L+ HGP+++G+N
Sbjct: 484 IGGLEYEAEYPYEAKK-QQCHFNRTLSHVQVSGFVDLPKGNETAMQEWLLTHGPISIGLN 542

Query: 282 AVWMQTYIGGVSCPY--ICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWG 338
           A  MQ Y GGVS P+  +C K  LDHGVLIVGYG S + P   K  PYWI+KNSWG  WG
Sbjct: 543 ANAMQFYRGGVSHPWKALCSKKNLDHGVLIVGYGVSDY-PNFHKTLPYWIVKNSWGPRWG 601

Query: 339 ENGYYKICMGRNVCGVDSMVSS 360
           E GYY++  G N CGV  M +S
Sbjct: 602 EQGYYRVYRGDNTCGVSEMATS 623


>gi|45822207|emb|CAE47500.1| cathepsin L-like proteinase [Diabrotica virgifera virgifera]
          Length = 326

 Score =  250 bits (639), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 146/322 (45%), Positives = 192/322 (59%), Gaps = 31/322 (9%)

Query: 45  HLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQ-LLD---PTAVHGVTK 100
           H L+ +  +  FK + +K+Y    E   RF +F+ +LR+ +      D    T   GVTK
Sbjct: 15  HALSDKEEWVQFKVRNNKSYRNYIEEQKRFTIFQGSLRKIENHNDKYDHGLSTFKLGVTK 74

Query: 101 FSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGS 160
           F+DLT  EF    LG++R  +         + P  DLP+ FDWR+ GAVT VKDQG+CGS
Sbjct: 75  FADLTEKEFS-DMLGISRSTKSSRPRVIHSLTPVKDLPSKFDWREKGAVTEVKDQGSCGS 133

Query: 161 CWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYI 220
           CWSFS TG +EGA+FL TG+LVSLSEQ LVDC  E        C  GC+GG M+ A EYI
Sbjct: 134 CWSFSTTGTVEGAYFLKTGKLVSLSEQNLVDCAKE-------DC-YGCSGGYMDKALEYI 185

Query: 221 LKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVI-SSDEDQMAANLVKHGPLAVG 279
             AGG+  E DYPY G D   C+FD SK+AA +SNF+ I  +DED +   ++  GP++V 
Sbjct: 186 ETAGGIMSENDYPYEGID-DKCRFDSSKVAAKISNFTYIKKNDEDDLKNAVIAKGPISVA 244

Query: 280 INAVW-MQTYIGGV---SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGE 335
           I+A +  Q Y  G+   S  Y     L+HGVL+VGYG+        KE+ YWI+KNSWG 
Sbjct: 245 IDASFNFQLYDSGILDDSSCYSDFNSLNHGVLVVGYGTE-------KEQDYWIVKNSWGA 297

Query: 336 NWGENGYYKICMGR---NVCGV 354
           +WG +GY  I M R   N CG+
Sbjct: 298 DWGMDGY--IWMSRNKNNQCGI 317


>gi|85068702|gb|ABC69431.1| cysteine protease [Clonorchis sinensis]
          Length = 326

 Score =  250 bits (639), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 146/363 (40%), Positives = 198/363 (54%), Gaps = 47/363 (12%)

Query: 3   RLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSK 62
           RL +  +L+  + S LA    V  D                    NA   +  FK K+ K
Sbjct: 2   RLFVCCVLVTTIWSALARTTQVEPD--------------------NARALYEEFKLKYKK 41

Query: 63  TYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTPSEFRRQFLGLNRRLR 121
           TY+  ++ + RF +FK NL RAKR Q ++  TA +GVT+FSDLT  EF+ ++L    R+R
Sbjct: 42  TYSNDDD-ELRFEIFKDNLLRAKRLQEMEQGTAQYGVTQFSDLTSEEFKTRYL----RMR 96

Query: 122 LPADAQKAPILPTNDLPTD---FDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLST 178
                    + P  D+  D   FDWR+HGAV  V DQG CGSCW+FS  G + G  F  T
Sbjct: 97  FDGPIVSEDLTPEEDVTMDNEKFDWREHGAVGPVLDQGKCGSCWAFSVIGNVVGQWFRKT 156

Query: 179 GELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTD 238
           G L++LSEQQLVDCD+          D GC+GG     +  I K GG+E   DYPYTG  
Sbjct: 157 GHLLALSEQQLVDCDY---------LDGGCDGGYPPQTYTAIQKMGGLELASDYPYTGV- 206

Query: 239 GGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYIC 298
           GG C  DKSK  A ++  +++   E   A  L   GPL+  +NA  +Q Y GG+  P +C
Sbjct: 207 GGICYMDKSKFVAYINGSTILPLSEKVQAQKLRAIGPLSSALNADTLQLYKGGIMRPRLC 266

Query: 299 GKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSM 357
               ++H VL VGYG           KPYWI+KNSWGE++GE GY++I  G   CG++S+
Sbjct: 267 DPAGVNHAVLTVGYGVQ-------NGKPYWIVKNSWGEDFGEEGYFRIYRGDGTCGINSI 319

Query: 358 VSS 360
           V++
Sbjct: 320 VTT 322


>gi|45822209|emb|CAE47501.1| cathepsin L-like proteinase [Diabrotica virgifera virgifera]
          Length = 325

 Score =  250 bits (638), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 144/318 (45%), Positives = 187/318 (58%), Gaps = 28/318 (8%)

Query: 47  LNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLL----DPTAVHGVTKFS 102
           LN +  +  FK K +K+Y +  E   RFR+F+ NLR+ +         + T   GVTKF+
Sbjct: 17  LNDKEEWVQFKVKNNKSYKSYVEEQTRFRIFQENLRKIENHNEKYNNGESTFKFGVTKFT 76

Query: 103 DLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCW 162
           DLT  EF    L L++  R         + P  DLP+ FDWRD GAVT VKDQG CGSCW
Sbjct: 77  DLTEKEFL-DLLVLSKNARPNRTHATHLLAPLRDLPSAFDWRDKGAVTEVKDQGMCGSCW 135

Query: 163 SFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK 222
           +FS TG++E AHFL TG LVSLSEQ LVDC  +       +C  GC GG M+ A EYI K
Sbjct: 136 TFSTTGSVEAAHFLKTGNLVSLSEQNLVDCAKD-------TC-YGCGGGWMDKALEYIEK 187

Query: 223 AGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVI-SSDEDQMAANLVKHGPLAVGIN 281
            GG+  EKDYPY G D  +C+FD SK+AA +SNF+ I  +DE+ +   +   GP++V I+
Sbjct: 188 -GGIMSEKDYPYEGVD-DNCRFDISKVAAKISNFTYIKKNDEEDLKNAVAAKGPISVAID 245

Query: 282 A-VWMQTYIGGVSCPYICGKYLD---HGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENW 337
           A    Q Y+ G+     C    D   HGVL+VGYG+          K YWIIKNSWG NW
Sbjct: 246 ASATFQLYVSGILDDTECSNEFDSLNHGVLVVGYGTEN-------GKDYWIIKNSWGVNW 298

Query: 338 GENGYYKICMGR-NVCGV 354
           G +GY ++   + N CG+
Sbjct: 299 GMDGYIRMSRNKNNQCGI 316


>gi|189239337|ref|XP_973607.2| PREDICTED: similar to cathepsin F-like cysteine protease [Tribolium
            castaneum]
          Length = 1726

 Score =  249 bits (637), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 145/327 (44%), Positives = 195/327 (59%), Gaps = 22/327 (6%)

Query: 44   DHLL---NAEHHFSLFKS--KFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHG 97
            D+LL   + E+H SLF    K       ++E+ YRF VF  NL + +     +  TA +G
Sbjct: 1408 DNLLGCDDREYHLSLFTDFLKKYNKKYHKKEYKYRFNVFVQNLMQIRVLNTFEQGTATYG 1467

Query: 98   VTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPI-LPTNDLPTDFDWRDHGAVTGVKDQG 156
            +T+F+D+T  EF R  LGL   LR   +   A   +P  +LP +FDWR    VT VK+Q 
Sbjct: 1468 ITRFADMTQKEFSRS-LGLRTDLRNENETPFAQAKIPNIELPKEFDWRKKNVVTEVKNQE 1526

Query: 157  ACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSA 216
             CGSCW+FS TG +EG + L  G+L+  SEQ+LVDCD +         D GCNGGLM++A
Sbjct: 1527 QCGSCWAFSVTGNVEGQYALRHGKLLEFSEQELVDCDTD---------DQGCNGGLMDTA 1577

Query: 217  FEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPL 276
            +  I K GG+E E+DYPY   D   C F+++     V+    IS +E  MA  LV +GP+
Sbjct: 1578 YRSIEKIGGLETEQDYPYDAED-EKCHFNRTLARVQVTGALNISHNETDMAKWLVANGPI 1636

Query: 277  AVGINAVWMQTYIGGVSCP--YICG-KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSW 333
            ++ INA  MQ Y+GGVS P  ++C  K LDHGVLIVGYG   + P+  K  PYWI+KNSW
Sbjct: 1637 SIAINANAMQFYMGGVSHPFKFLCSPKNLDHGVLIVGYGVHNY-PLFKKSLPYWIVKNSW 1695

Query: 334  GENWGENGYYKICMGRNVCGVDSMVSS 360
            G  WGE GYY++  G   CG++   SS
Sbjct: 1696 GTGWGEQGYYRVYRGDGTCGLNQTPSS 1722


>gi|270011071|gb|EFA07519.1| cystatin [Tribolium castaneum]
          Length = 1761

 Score =  249 bits (637), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 145/327 (44%), Positives = 195/327 (59%), Gaps = 22/327 (6%)

Query: 44   DHLL---NAEHHFSLFKS--KFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHG 97
            D+LL   + E+H SLF    K       ++E+ YRF VF  NL + +     +  TA +G
Sbjct: 1443 DNLLGCDDREYHLSLFTDFLKKYNKKYHKKEYKYRFNVFVQNLMQIRVLNTFEQGTATYG 1502

Query: 98   VTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPI-LPTNDLPTDFDWRDHGAVTGVKDQG 156
            +T+F+D+T  EF R  LGL   LR   +   A   +P  +LP +FDWR    VT VK+Q 
Sbjct: 1503 ITRFADMTQKEFSRS-LGLRTDLRNENETPFAQAKIPNIELPKEFDWRKKNVVTEVKNQE 1561

Query: 157  ACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSA 216
             CGSCW+FS TG +EG + L  G+L+  SEQ+LVDCD +         D GCNGGLM++A
Sbjct: 1562 QCGSCWAFSVTGNVEGQYALRHGKLLEFSEQELVDCDTD---------DQGCNGGLMDTA 1612

Query: 217  FEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPL 276
            +  I K GG+E E+DYPY   D   C F+++     V+    IS +E  MA  LV +GP+
Sbjct: 1613 YRSIEKIGGLETEQDYPYDAED-EKCHFNRTLARVQVTGALNISHNETDMAKWLVANGPI 1671

Query: 277  AVGINAVWMQTYIGGVSCP--YICG-KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSW 333
            ++ INA  MQ Y+GGVS P  ++C  K LDHGVLIVGYG   + P+  K  PYWI+KNSW
Sbjct: 1672 SIAINANAMQFYMGGVSHPFKFLCSPKNLDHGVLIVGYGVHNY-PLFKKSLPYWIVKNSW 1730

Query: 334  GENWGENGYYKICMGRNVCGVDSMVSS 360
            G  WGE GYY++  G   CG++   SS
Sbjct: 1731 GTGWGEQGYYRVYRGDGTCGLNQTPSS 1757


>gi|390178852|ref|XP_003736743.1| GA27408, isoform B [Drosophila pseudoobscura pseudoobscura]
 gi|388859612|gb|EIM52816.1| GA27408, isoform B [Drosophila pseudoobscura pseudoobscura]
          Length = 477

 Score =  249 bits (636), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 134/322 (41%), Positives = 190/322 (59%), Gaps = 19/322 (5%)

Query: 46  LLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLD-PTAVHGVTKFSDL 104
           L   +H F  F+ +F + Y    E   R R+F+ NL+  +     +  +A +G+T+F+D+
Sbjct: 164 LDKVDHLFHKFQIRFGRRYDNTAERQMRLRIFRQNLKTIEELNTNEMGSAKYGITEFADM 223

Query: 105 TPSEFRRQFLGLNRRLRLPADAQKAPILPT--NDLPTDFDWRDHGAVTGVKDQGACGSCW 162
           T +E++ +  GL +R           ++P    + P +FDWR   AVT VK+QG+CGSCW
Sbjct: 224 TSTEYKER-TGLWQRDEQKPTGGAPAVVPAYEGEFPKEFDWRQKNAVTPVKNQGSCGSCW 282

Query: 163 SFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK 222
           +FS TG +EG + + TGEL   SEQ+L+DCD         + DS CNGGLM++A++ I  
Sbjct: 283 AFSVTGNIEGLYAVKTGELKEFSEQELLDCD---------TTDSACNGGLMDNAYKAIKD 333

Query: 223 AGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVGIN 281
            GG+E E +YPY       C F+++     VS F  +   +E  M   L+ HGP+++G+N
Sbjct: 334 IGGLEYEAEYPYEAKK-QQCHFNRTLSHVQVSGFVDLPKGNETAMQEWLLTHGPISIGLN 392

Query: 282 AVWMQTYIGGVSCPY--ICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWG 338
           A  MQ Y GGVS P+  +C K  LDHGVLIVGYG S + P   K  PYWI+KNSWG  WG
Sbjct: 393 ANAMQFYRGGVSHPWKALCSKKNLDHGVLIVGYGVSDY-PNFHKTLPYWIVKNSWGPRWG 451

Query: 339 ENGYYKICMGRNVCGVDSMVSS 360
           E GYY++  G N CGV  M +S
Sbjct: 452 EQGYYRVYRGDNTCGVSEMATS 473


>gi|395544492|ref|XP_003774144.1| PREDICTED: cathepsin F [Sarcophilus harrisii]
          Length = 451

 Score =  249 bits (636), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 141/319 (44%), Positives = 187/319 (58%), Gaps = 34/319 (10%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTPSEFRR 111
           F  F + ++K+YA   E   R  +F  NL  A++ Q LD  +A +GVTKFSDLT  EFR 
Sbjct: 154 FKDFLTTYNKSYANATETQRRLGIFARNLELARKVQELDRGSAEYGVTKFSDLTEEEFRT 213

Query: 112 QFLG-----LNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSA 166
            +L      L  R   P  A + P       P  +DWRDHGAVTGVK+QGACGSCW+FS 
Sbjct: 214 SYLNPLLSSLPGRALRPGPATRGPA------PASWDWRDHGAVTGVKNQGACGSCWAFSV 267

Query: 167 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGV 226
           TG +EG  FL  G L++LSEQ+LVDCD         + D  C GGL ++A+  I K GG+
Sbjct: 268 TGNVEGQWFLRRGALLALSEQELVDCD---------TLDQACGGGLPSNAYTAIEKLGGL 318

Query: 227 EREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQ 286
           E EKDY Y G     C F   K    +++   +S DE+++A  L ++GP+++ +NA  MQ
Sbjct: 319 ETEKDYSYEGRK-ERCSFSPDKARVYINSSVDLSRDEEELATWLAENGPVSIALNAFAMQ 377

Query: 287 TYIGGVSCPY--ICGK-YLDHGVLIVGYG-SSGFAPIRFKEKPYWIIKNSWGENWGENGY 342
            Y  GVS P+  +C   ++DH VL+VGYG  SG         P+W IKNSWG +WGE GY
Sbjct: 378 FYRRGVSHPFRPLCSPWFIDHAVLLVGYGHRSGI--------PFWAIKNSWGPDWGEEGY 429

Query: 343 YKICMGRNVCGVDSMVSSV 361
           Y +  G   CGV++M SS 
Sbjct: 430 YYLYRGARACGVNAMASSA 448


>gi|116242314|gb|ABJ89814.1| cysteine protease preprotein [Clonorchis sinensis]
          Length = 326

 Score =  249 bits (635), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 147/363 (40%), Positives = 197/363 (54%), Gaps = 47/363 (12%)

Query: 3   RLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSK 62
           RL +  +L+  + S LA    V  D                    NA   +  FK K+ K
Sbjct: 2   RLFVCCVLVTTIWSALARTTQVEPD--------------------NARALYEEFKLKYKK 41

Query: 63  TYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTPSEFRRQFLGLNRRLR 121
           TY+  ++ + RF +FK NL RAKR Q ++  TA +GVT+FSDLT  EF+ ++L    R+R
Sbjct: 42  TYSNDDD-ELRFEIFKDNLLRAKRLQEMEQGTAQYGVTQFSDLTSEEFKTRYL----RMR 96

Query: 122 LPADAQKAPILPTNDLPTD---FDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLST 178
                    + P  D+  D   FDWR+HGAV  V DQG CGSCW+FS  G + G  F  T
Sbjct: 97  FDGPIVSEDLTPEEDVTMDNEKFDWREHGAVGPVLDQGKCGSCWAFSVIGNVVGQWFRKT 156

Query: 179 GELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTD 238
           G L++LSEQQLVDCD+          D GC+GG     +  I K GG+E   DYPYTG  
Sbjct: 157 GHLLALSEQQLVDCDY---------LDDGCDGGYPPQTYTAIQKMGGLELASDYPYTGV- 206

Query: 239 GGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYIC 298
           GG C  DKSK  A V+  +++   E   A  L   GPL+  +NA  +Q Y GG+  P  C
Sbjct: 207 GGICHMDKSKFVAYVNGSTILPLSEKVQAQKLRAIGPLSSALNADTLQLYKGGIMRPKWC 266

Query: 299 GKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSM 357
               ++H VL VGYG           KPYWI+KNSWGE++GE GY++I  G   CG++S+
Sbjct: 267 DPAGVNHAVLTVGYGVQ-------NGKPYWIVKNSWGEDFGEEGYFRIYRGDGTCGINSI 319

Query: 358 VSS 360
           V++
Sbjct: 320 VTT 322


>gi|67773378|gb|AAY81946.1| cysteine protease 8 [Paragonimus westermani]
          Length = 325

 Score =  249 bits (635), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 133/317 (41%), Positives = 192/317 (60%), Gaps = 26/317 (8%)

Query: 48  NAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTP 106
           NA   +  FK  + K YA +++   RF +FK NL RA++ Q+ +  TA +GVT+FSDLTP
Sbjct: 27  NARELYEQFKRDYGKAYANEDDQK-RFAIFKDNLVRAQQYQMQEQGTAKYGVTQFSDLTP 85

Query: 107 SEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSA 166
            EF  ++LGL    R+     +  +      P   DWR+ GAV  +++QG+CGSCW+FS 
Sbjct: 86  EEFEAKYLGL----RIDEQVDRVQLNDLQTAPASVDWREKGAVGPIENQGSCGSCWAFSV 141

Query: 167 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGV 226
            G +EG  FL TG LVSLS+QQLVDCD         + D+GC GG     ++ I + GG+
Sbjct: 142 VGNIEGQWFLKTGYLVSLSKQQLVDCD---------TVDNGCYGGYPPYTYKEIKRMGGL 192

Query: 227 EREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQ 286
           E + DYPYTG  G  C+ D+SK+ A + +  V+ +DE++ AA L +HGP++  +NA ++Q
Sbjct: 193 ELQSDYPYTGW-GHGCRLDRSKLFAKIDDSIVLEADEEKQAAWLAEHGPMSTCLNAKYLQ 251

Query: 287 TYIGGVSCP--YICG-KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYY 343
            Y  G+  P   +C  + L+H VL VGY +           PYWIIKNSWG +WGE+GY+
Sbjct: 252 FYQSGILHPSKAMCSPEGLNHAVLTVGYDTK-------HGIPYWIIKNSWGTSWGEDGYF 304

Query: 344 KICMGRNVCGVDSMVSS 360
           +I  G   CG+D + +S
Sbjct: 305 RIYRGDGTCGIDRLTTS 321


>gi|417401303|gb|JAA47542.1| Putative cathepsin f [Desmodus rotundus]
          Length = 459

 Score =  248 bits (634), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 139/319 (43%), Positives = 190/319 (59%), Gaps = 36/319 (11%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTPSEFRR 111
           F  F + +++TY T+EE  +R  +F  N+ RA+  Q LD  TA +GVTKFSDLT  EFR 
Sbjct: 162 FKHFIATYNRTYETEEEAQWRMSIFINNMVRAQEIQALDRGTAQYGVTKFSDLTEEEFRT 221

Query: 112 QFL------GLNRRLRLPADAQKAPILPTND-LPTDFDWRDHGAVTGVKDQGACGSCWSF 164
            +L      GL +++RL          P +D  P ++DWR+ GAVT VK+QG CGSCW+F
Sbjct: 222 FYLNPLLKEGLGKKMRLAK--------PVDDPAPPEWDWRNKGAVTKVKNQGMCGSCWAF 273

Query: 165 SATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAG 224
           S TG +EG  FL  G+L+SLSEQ+LVDCD         + D  C GGL ++A+  I   G
Sbjct: 274 SVTGNVEGQWFLKQGDLLSLSEQELVDCD---------TLDKACMGGLPSNAYSAIKTLG 324

Query: 225 GVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW 284
           G+E E DY Y G    +C F   K+   +++   +S DE ++AA L K GP+++ INA  
Sbjct: 325 GLETEDDYSYHG-HLQTCSFTAEKVKVYINDSVELSKDEQKLAAWLAKKGPISIAINAFG 383

Query: 285 MQTYIGGVSCP--YICGK-YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENG 341
           MQ Y  G+S P   +C   ++DH VL+VGYG+         + P+W IKNSWG +WGE G
Sbjct: 384 MQFYRRGISRPLRLLCSPWFIDHAVLLVGYGNRS-------DVPFWAIKNSWGTDWGEEG 436

Query: 342 YYKICMGRNVCGVDSMVSS 360
           YY +  G   CGV+ M SS
Sbjct: 437 YYYLHRGSRACGVNVMASS 455


>gi|85068704|gb|ABC69432.1| cysteine protease [Clonorchis sinensis]
          Length = 326

 Score =  248 bits (634), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 147/363 (40%), Positives = 196/363 (53%), Gaps = 47/363 (12%)

Query: 3   RLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSK 62
           RL +  +L+  + S LA    V  D                    NA   +  FK K+ K
Sbjct: 2   RLFVCCVLVTTIWSALARTTQVEPD--------------------NARALYEEFKLKYKK 41

Query: 63  TYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTPSEFRRQFLGLNRRLR 121
           TY+  ++ + RF +FK NL RAKR Q ++  TA +GVT+FSDLT  EF  ++L    R+R
Sbjct: 42  TYSNDDD-ELRFEIFKDNLLRAKRLQEMEQGTAQYGVTQFSDLTSEEFETRYL----RMR 96

Query: 122 LPADAQKAPILPTNDLPTD---FDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLST 178
                    + P  D+  D   FDWR+HGAV  V DQG CGSCW+FS  G + G  F  T
Sbjct: 97  FDGPIVSEDLTPEEDVTMDNEKFDWREHGAVGPVLDQGKCGSCWAFSVIGNVVGQWFRKT 156

Query: 179 GELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTD 238
           G L++LSEQQLVDCD+          D GC+GG     +  I K GG+E   DYPYTG  
Sbjct: 157 GHLLALSEQQLVDCDY---------LDDGCDGGYPPQTYTAIQKMGGLELASDYPYTGV- 206

Query: 239 GGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYIC 298
           GG C  DKSK  A V+  +++   E   A  L   GPL+  +NA  +Q Y GG+  P  C
Sbjct: 207 GGICHMDKSKFVAYVNGSTILPLSEKVQAQKLRAIGPLSSALNADTLQLYKGGIMRPKWC 266

Query: 299 GKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSM 357
               ++H VL VGYG           KPYWI+KNSWGE++GE GY++I  G   CG++S+
Sbjct: 267 DPAGVNHAVLTVGYGVQ-------NGKPYWIVKNSWGEDFGEEGYFRIYRGDGTCGINSI 319

Query: 358 VSS 360
           V++
Sbjct: 320 VTT 322


>gi|85068698|gb|ABC69429.1| cysteine protease [Clonorchis sinensis]
          Length = 326

 Score =  248 bits (633), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 146/363 (40%), Positives = 197/363 (54%), Gaps = 47/363 (12%)

Query: 3   RLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSK 62
           RL +  +L+  + S LA    V  D                    NA   +  FK K+ K
Sbjct: 2   RLFVCCVLVTTIWSALARTTQVEPD--------------------NARALYEEFKLKYKK 41

Query: 63  TYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTPSEFRRQFLGLNRRLR 121
           TY+  ++ + RF +FK NL RAKR Q ++  TA +GVT+FSDLT  EF+ ++L    R+R
Sbjct: 42  TYSNDDD-ELRFEIFKDNLLRAKRLQEMEQGTAQYGVTQFSDLTSEEFKTRYL----RMR 96

Query: 122 LPADAQKAPILPTNDLPTD---FDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLST 178
                      P  D+  D   FDWR+HGAV  V DQG CGSCW+FS  G + G  F  T
Sbjct: 97  FDGPIVSEDPSPEEDVTMDNEKFDWREHGAVGPVLDQGKCGSCWAFSVIGNVVGQWFRKT 156

Query: 179 GELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTD 238
           G L++LSEQQLVDCD+          D GC+GG     +  I K GG+E   DYPYTG  
Sbjct: 157 GHLLALSEQQLVDCDY---------LDGGCDGGYPPQTYTAIQKMGGLELASDYPYTGV- 206

Query: 239 GGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYIC 298
           GG C  DKSK  A ++  +++   E   A  L   GPL+  +NA  +Q Y GG+  P +C
Sbjct: 207 GGICYMDKSKFVAYINGSTILPLSEKVQAQKLRAIGPLSSALNADTLQLYKGGIMRPRLC 266

Query: 299 GKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSM 357
               ++H VL VGYG           KPYWI+KNSWGE++GE GY++I  G   CG++S+
Sbjct: 267 DPAGVNHAVLTVGYGVQ-------NGKPYWIVKNSWGEDFGEEGYFRIYRGDGTCGINSI 319

Query: 358 VSS 360
           V++
Sbjct: 320 VTT 322


>gi|38683931|gb|AAR27011.1| cysteine protease [Periserrula leucophryna]
          Length = 283

 Score =  248 bits (633), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 140/295 (47%), Positives = 183/295 (62%), Gaps = 24/295 (8%)

Query: 73  RFRVFKANLRRAKR---RQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKA 129
           RF++F+ N+++       +L D  A +GVT+FSDL   EFRR +L     L    D  +A
Sbjct: 2   RFKIFRENMKKINTLNDNELGD--AEYGVTQFSDLAEEEFRRYYLTPKWDLSHRPDLVRA 59

Query: 130 PILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQL 189
            I P  D P  FDWRDH AVT VK+QG CGSCW+FS T  +EG   +   +LVSLSEQ+L
Sbjct: 60  KI-PDVDPPASFDWRDHNAVTPVKNQGMCGSCWAFSTTENIEGQWAIHRNKLVSLSEQEL 118

Query: 190 VDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKI 249
           VDCD           D GC GGL  +A+E I++ GG+E EK YPY   D   CKF    +
Sbjct: 119 VDCD---------KLDDGCEGGLPVNAYEEIIRLGGLESEKKYPYDAED-EKCKFTVGDV 168

Query: 250 AAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCP--YICGK-YLDHGV 306
           A  +++   ISS+E  MAA L K+GP+++GINA  MQ Y+GGVS P  ++C    LDHGV
Sbjct: 169 AVYINSSVNISSNEADMAAWLYKNGPISIGINAFAMQFYMGGVSHPFSFLCSPDELDHGV 228

Query: 307 LIVGYGS-SGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSS 360
           LIVGYG+  G+    F + PYWI+KNSWG +WG  GYY +  G  VCG++ M +S
Sbjct: 229 LIVGYGTKKGW----FSDSPYWIVKNSWGASWGVQGYYLVYRGDGVCGLNKMPTS 279


>gi|56755191|gb|AAW25775.1| SJCHGC00511 protein [Schistosoma japonicum]
          Length = 454

 Score =  248 bits (632), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 135/320 (42%), Positives = 197/320 (61%), Gaps = 28/320 (8%)

Query: 48  NAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTP 106
           N    ++ FK  + K Y  + +++ RF +FK+NL +A+  Q+L+  +AV+GVT +SDLT 
Sbjct: 152 NVGEMYAQFKLTYRKQYH-ETDNEKRFSIFKSNLLKAQLYQVLERGSAVYGVTPYSDLTT 210

Query: 107 SEFRRQFLGLNRRLRLPADAQKAPILP---TNDLPTDFDWRDHGAVTGVKDQGACGSCWS 163
            EF R  L    R    A +++  I P     D+P +FDWR+ GAVT VK+QG CGSCW+
Sbjct: 211 DEFSRTHLTAPWR----ASSKRNTISPRREVGDIPNNFDWREKGAVTEVKNQGMCGSCWA 266

Query: 164 FSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA 223
           FS TG +E   F  TG+L+SLSEQQLVDCD         S D GCNGGL ++A+E I++ 
Sbjct: 267 FSTTGNIESQWFRKTGKLLSLSEQQLVDCD---------SLDDGCNGGLPSNAYESIIRM 317

Query: 224 GGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAV 283
           GG+  E +YPY   +   C    + +AA +++   ++ DE ++A  L  H  ++VG+NA+
Sbjct: 318 GGLMLEDNYPYDAKN-EKCHLKVANVAAYINSSVNLTQDESELAIWLYHHSAISVGMNAL 376

Query: 284 WMQTYIGGVSCPY--ICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGEN 340
            +Q Y  G+S P+   C KY LDH VL+VGYG S       K +P+WI+KNSWG  WGE 
Sbjct: 377 LLQFYRHGISHPWWIFCSKYLLDHAVLLVGYGVSE------KNEPFWIVKNSWGVEWGEK 430

Query: 341 GYYKICMGRNVCGVDSMVSS 360
           GY+++  G   CG+++  +S
Sbjct: 431 GYFRMYRGDGTCGINTDATS 450


>gi|431910221|gb|ELK13294.1| Cathepsin F [Pteropus alecto]
          Length = 458

 Score =  248 bits (632), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 141/325 (43%), Positives = 193/325 (59%), Gaps = 28/325 (8%)

Query: 43  EDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKF 101
           ED ++     F  F   +++TY T+EE  +R  VF  N+ RA++ Q LD  TA +GVTKF
Sbjct: 151 EDFVMQVASIFKEFVITYNRTYETKEEAQWRMSVFINNMMRAQKIQALDRGTARYGVTKF 210

Query: 102 SDLTPSEFRRQFLG-LNRRLRLPADAQKAPIL--PTNDLPTDFDWRDHGAVTGVKDQGAC 158
           SDLT  EFR  +L  L + LR    +++ P+    +   P ++DWR+ GAVT VKDQG C
Sbjct: 211 SDLTEEEFRTIYLNPLLKELR----SKRMPLAMSVSGPAPPEWDWRNKGAVTKVKDQGMC 266

Query: 159 GSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFE 218
           GSCW+FS TG +EG  FL  G+L+SLSEQ+LVDCD           D  C GGL ++A+ 
Sbjct: 267 GSCWAFSVTGNVEGQWFLKRGDLLSLSEQELVDCDK---------LDKACLGGLPSNAYS 317

Query: 219 YILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAV 278
            I   GG+E E DY Y G    +C F   K    +++   +S +E ++AA L K+GP+++
Sbjct: 318 AIKTLGGLETEDDYGYNG-HLQTCNFSAEKAKVYINDSVELSQNEQKLAAWLAKNGPISI 376

Query: 279 GINAVWMQTYIGGVSCPY--ICGKYL-DHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGE 335
            INA  MQ Y  G+S P   +C  +L DH VL+VGYG+         + P+W IKNSWG 
Sbjct: 377 AINAFGMQFYRHGISHPLRPLCSPWLIDHAVLLVGYGNRS-------DIPFWAIKNSWGT 429

Query: 336 NWGENGYYKICMGRNVCGVDSMVSS 360
           +WGE GYY +  G   CGV+ M SS
Sbjct: 430 DWGEEGYYYLHRGSGACGVNIMASS 454


>gi|432880227|ref|XP_004073613.1| PREDICTED: cathepsin F-like [Oryzias latipes]
          Length = 473

 Score =  248 bits (632), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 139/313 (44%), Positives = 185/313 (59%), Gaps = 21/313 (6%)

Query: 52  HFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTPSEFR 110
            F  F  K+ K Y++QEE + R ++F+ NL+ A++ Q LD  +A +GVTKFSDLT  EFR
Sbjct: 174 QFKDFMVKYKKDYSSQEEAERRLQIFQENLKTAEKLQALDQGSAEYGVTKFSDLTEEEFR 233

Query: 111 RQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGAL 170
             +L             K         P  +DWRDHGAV+ VK+QG CGSCW+FS TG +
Sbjct: 234 STYLNPLLSQWTLHRGMKPAPPAKTPAPDSWDWRDHGAVSPVKNQGMCGSCWAFSVTGNI 293

Query: 171 EGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREK 230
           EG  FL  G L+SLSEQ+LVDCD           D  C GGL ++A+E I K GG+E E 
Sbjct: 294 EGQWFLKNGTLLSLSEQELVDCD---------GLDQACRGGLPSNAYEAIEKLGGLESET 344

Query: 231 DYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIG 290
           DY YTG     C F   K+AA +++   +  DE ++AA L ++GP++V +NA  MQ Y  
Sbjct: 345 DYSYTGHK-QKCDFTNRKVAAYINSSVELPKDEREIAAWLAENGPISVALNAFAMQFYKK 403

Query: 291 GVSCPY--ICGKYL-DHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICM 347
           GVS P+   C  ++ DH VL+VGYG            P+W IKNSWGE++GE GYY +  
Sbjct: 404 GVSHPWKIFCNPWMIDHAVLLVGYGERNGI-------PFWAIKNSWGEDYGEQGYYYLQR 456

Query: 348 GRNVCGVDSMVSS 360
           G N CG++ M SS
Sbjct: 457 GSNACGINRMGSS 469


>gi|410913409|ref|XP_003970181.1| PREDICTED: cathepsin F-like [Takifugu rubripes]
          Length = 476

 Score =  248 bits (632), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 145/318 (45%), Positives = 196/318 (61%), Gaps = 33/318 (10%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTPSEFRR 111
           F  F +K++K Y++QEE D R ++FK NL+ A++ Q LD  +A +GVTKFSDLT  EFR 
Sbjct: 178 FKEFMTKYNKVYSSQEEADRRLQIFKENLKTAEKIQSLDEGSAEYGVTKFSDLTEEEFRL 237

Query: 112 QFLG------LNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFS 165
            +L         RR   PA   ++P       P  +DWRDHGAV+ VK+QG CGSCW+FS
Sbjct: 238 TYLNPLLSQWTLRRPMKPASPARSPA------PASWDWRDHGAVSPVKNQGLCGSCWAFS 291

Query: 166 ATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGG 225
            TG +EG  FL  G+L+SLSEQ+LVDCD           D  C GGL ++A+E I   GG
Sbjct: 292 VTGNIEGQWFLKHGKLLSLSEQELVDCD---------GLDHACRGGLPSNAYEAIEGLGG 342

Query: 226 VEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWM 285
           +E E DY Y+G     C F   K+AA +++   + SDE++MAA L ++GP++V +NA  M
Sbjct: 343 LEAENDYTYSGHK-QKCSFATEKVAAYINSSVELPSDENEMAAWLAENGPVSVALNAFAM 401

Query: 286 QTYIGGVSCPY--ICGKYL-DHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGY 342
           Q Y  GVS P+  +C  ++ DH VL+VGYG            P+W IKNSWGE++GE GY
Sbjct: 402 QFYKKGVSHPWMILCNPWMIDHAVLLVGYGERNGI-------PFWAIKNSWGEDYGEEGY 454

Query: 343 YKICMGRNVCGVDSMVSS 360
           Y +  G N CG++ M SS
Sbjct: 455 YYLYKGSNACGINKMGSS 472


>gi|256077197|ref|XP_002574894.1| cathepsin F (C01 family) [Schistosoma mansoni]
 gi|353230780|emb|CCD77197.1| cathepsin F (C01 family) [Schistosoma mansoni]
          Length = 419

 Score =  247 bits (630), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 132/320 (41%), Positives = 194/320 (60%), Gaps = 26/320 (8%)

Query: 48  NAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTP 106
           N +  +  FK K+ K Y   E+ + RF +FK+N+ +A+  Q+ +  +A++GVT +SDLT 
Sbjct: 115 NVDEKYVQFKLKYRKQYHETED-EIRFNIFKSNILKAQLYQVFERGSAIYGVTPYSDLTT 173

Query: 107 SEFRRQFLGLNRRLRLPADAQKAPI---LPTNDLPTDFDWRDHGAVTGVKDQGACGSCWS 163
            EF R  L       +P+     P       N++P +FDWR+ GAVT VK+QG CGSCW+
Sbjct: 174 DEFARTHL--TASWVVPSSRSNTPTSLGKEVNNIPKNFDWREKGAVTEVKNQGMCGSCWA 231

Query: 164 FSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA 223
           FS TG +E   F  TG+L+SLSEQQLVDCD           D GCNGGL ++A+E I+K 
Sbjct: 232 FSTTGNVESQWFRKTGKLLSLSEQQLVDCD---------GLDDGCNGGLPSNAYESIIKM 282

Query: 224 GGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAV 283
           GG+  E +YPY   +   C      +A  +++   ++ DE ++AA L  +  ++VG+NA+
Sbjct: 283 GGLMLEDNYPYDAKN-EKCHLKTDGVAVYINSSVNLTQDETELAAWLYHNSTISVGMNAL 341

Query: 284 WMQTYIGGVSCPY--ICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGEN 340
            +Q Y  G+S P+   C KY LDH VL+VGYG S       K +P+WI+KNSWG  WGEN
Sbjct: 342 LLQFYQHGISHPWWIFCSKYLLDHAVLLVGYGVSE------KNEPFWIVKNSWGVEWGEN 395

Query: 341 GYYKICMGRNVCGVDSMVSS 360
           GY+++  G   CG++++ +S
Sbjct: 396 GYFRMYRGDGTCGINTVATS 415


>gi|30575714|gb|AAP33049.1| cysteine proteinase 1 [Clonorchis sinensis]
          Length = 326

 Score =  247 bits (630), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 146/363 (40%), Positives = 196/363 (53%), Gaps = 47/363 (12%)

Query: 3   RLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSK 62
           RL +  +L+  + S LA    V  D                    NA   +  F  K+ K
Sbjct: 2   RLFVCCVLVTTIWSALARTTQVEPD--------------------NARALYEEFTLKYKK 41

Query: 63  TYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTPSEFRRQFLGLNRRLR 121
           TY+  ++ + RF +FK NL RAKR Q ++  TA +GVT+FSDLT  EF+ ++L    R+R
Sbjct: 42  TYSNDDD-ELRFEIFKDNLLRAKRLQEMEQGTAQYGVTQFSDLTSEEFKTRYL----RMR 96

Query: 122 LPADAQKAPILPTNDLPTD---FDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLST 178
                    + P  D+  D   FDWR+HGAV  V DQG CGSCW+FS  G + G  F  T
Sbjct: 97  FDGPIVSEDLTPEEDVTMDNEKFDWREHGAVGPVLDQGKCGSCWAFSVIGNVVGQWFRKT 156

Query: 179 GELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTD 238
           G L++LSEQQLVDCD+          D GC+GG     +  I K GG+E   DYPYTG  
Sbjct: 157 GHLLALSEQQLVDCDY---------LDDGCDGGYPPQTYTAIQKMGGLELASDYPYTGV- 206

Query: 239 GGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYIC 298
           GG C  DKSK  A V+  +++   E   A  L   GPL+  +NA  +Q Y GG+  P  C
Sbjct: 207 GGICHMDKSKFVAYVNGSTILPLSEKVQAQKLRAIGPLSSALNADTLQLYKGGIMRPKWC 266

Query: 299 GKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSM 357
               ++H VL VGYG           KPYWI+KNSWGE++GE GY++I  G   CG++S+
Sbjct: 267 DPAGVNHAVLTVGYGVQ-------NGKPYWIVKNSWGEDFGEKGYFRIYRGDGTCGINSI 319

Query: 358 VSS 360
           V++
Sbjct: 320 VTT 322


>gi|339244639|ref|XP_003378245.1| cathepsin F [Trichinella spiralis]
 gi|316972864|gb|EFV56510.1| cathepsin F [Trichinella spiralis]
          Length = 366

 Score =  247 bits (630), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 134/317 (42%), Positives = 190/317 (59%), Gaps = 21/317 (6%)

Query: 51  HHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTPSEF 109
            +F  F  +F+K Y T++    ++ +FK+N+  AKR Q  +  TA++G T F+D+TP EF
Sbjct: 64  ENFKQFMVEFNKWYETEKLTAEKYNIFKSNMVIAKRLQEEEQGTAIYGPTIFADMTPEEF 123

Query: 110 RRQFLGLN-RRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATG 168
           R+  L  N   ++ P   ++   +P +++    DWR   AVT VKDQG CGSCW+F    
Sbjct: 124 RKTHLNFNPNNVKKP---KRMANIPKSNISERMDWRKFNAVTSVKDQGNCGSCWAFCTVA 180

Query: 169 ALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVER 228
            +EGA  + T +L+SLSEQQLVDCD           D GC GGL  +A+  I++ GG+E+
Sbjct: 181 NIEGAWAVKTAQLISLSEQQLVDCDR---------LDDGCEGGLPVNAYLEIIRLGGLEK 231

Query: 229 EKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTY 288
           E+DY YT    G CKF+ +K A  +++  V+  DED +A  + ++GP+AVG+NA  M  Y
Sbjct: 232 EEDYKYTAR-SGKCKFNHTKSAVYINDTVVLPEDEDAIARYVSENGPVAVGLNADAMMFY 290

Query: 289 IGGVSCP--YICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKI 345
             G++ P   +C    ++HGV IVGY         F   PYWIIKNSWG NWGE GYY +
Sbjct: 291 RSGIAHPSRLMCSPDGINHGVTIVGY---DVKESLFWSTPYWIIKNSWGPNWGEKGYYYL 347

Query: 346 CMGRNVCGVDSMVSSVA 362
             G+ VCG+D M SSV 
Sbjct: 348 YRGKGVCGIDQMASSVV 364


>gi|256077193|ref|XP_002574892.1| cathepsin F (C01 family) [Schistosoma mansoni]
 gi|353230781|emb|CCD77198.1| cathepsin F (C01 family) [Schistosoma mansoni]
          Length = 457

 Score =  247 bits (630), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 132/320 (41%), Positives = 194/320 (60%), Gaps = 26/320 (8%)

Query: 48  NAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTP 106
           N +  +  FK K+ K Y   E+ + RF +FK+N+ +A+  Q+ +  +A++GVT +SDLT 
Sbjct: 153 NVDEKYVQFKLKYRKQYHETED-EIRFNIFKSNILKAQLYQVFERGSAIYGVTPYSDLTT 211

Query: 107 SEFRRQFLGLNRRLRLPADAQKAPI---LPTNDLPTDFDWRDHGAVTGVKDQGACGSCWS 163
            EF R  L       +P+     P       N++P +FDWR+ GAVT VK+QG CGSCW+
Sbjct: 212 DEFARTHL--TASWVVPSSRSNTPTSLGKEVNNIPKNFDWREKGAVTEVKNQGMCGSCWA 269

Query: 164 FSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA 223
           FS TG +E   F  TG+L+SLSEQQLVDCD           D GCNGGL ++A+E I+K 
Sbjct: 270 FSTTGNVESQWFRKTGKLLSLSEQQLVDCD---------GLDDGCNGGLPSNAYESIIKM 320

Query: 224 GGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAV 283
           GG+  E +YPY   +   C      +A  +++   ++ DE ++AA L  +  ++VG+NA+
Sbjct: 321 GGLMLEDNYPYDAKN-EKCHLKTDGVAVYINSSVNLTQDETELAAWLYHNSTISVGMNAL 379

Query: 284 WMQTYIGGVSCPY--ICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGEN 340
            +Q Y  G+S P+   C KY LDH VL+VGYG S       K +P+WI+KNSWG  WGEN
Sbjct: 380 LLQFYQHGISHPWWIFCSKYLLDHAVLLVGYGVSE------KNEPFWIVKNSWGVEWGEN 433

Query: 341 GYYKICMGRNVCGVDSMVSS 360
           GY+++  G   CG++++ +S
Sbjct: 434 GYFRMYRGDGTCGINTVATS 453


>gi|21218381|gb|AAM44058.1|AF510740_1 cathepsin L1 [Schistosoma japonicum]
          Length = 317

 Score =  246 bits (629), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 135/320 (42%), Positives = 196/320 (61%), Gaps = 28/320 (8%)

Query: 48  NAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTP 106
           N    ++ FK  + K Y  + +++ RF +FK+NL +A+  Q+L+  +AV+GVT +SDLT 
Sbjct: 15  NVGEMYAQFKLTYRKQYH-ETDNEKRFSIFKSNLLKAQLYQVLERGSAVYGVTPYSDLTT 73

Query: 107 SEFRRQFLGLNRRLRLPADAQKAPILP---TNDLPTDFDWRDHGAVTGVKDQGACGSCWS 163
            EF R  L    R    A +++  I P     D+P +FDWR+ GAVT VK+QG CGSCW+
Sbjct: 74  DEFSRTHLTAPWR----ASSKRNTIPPRREVGDIPNNFDWREKGAVTEVKNQGMCGSCWA 129

Query: 164 FSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA 223
           FS TG +E   F  TG+L+SLSEQQLVDCD         S D GCNGGL ++A+E I++ 
Sbjct: 130 FSTTGNIESQWFRKTGKLLSLSEQQLVDCD---------SLDDGCNGGLPSNAYESIIRM 180

Query: 224 GGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAV 283
           GG+  E +YPY   +   C      +AA +++   ++ DE ++A  L  H  ++VG+NA+
Sbjct: 181 GGLMLEDNYPYDAKN-EKCHLKVGNVAAYINSSVNLTQDESELAIWLYHHSAISVGMNAL 239

Query: 284 WMQTYIGGVSCPY--ICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGEN 340
            +Q Y  G+S P+   C KY LDH VL+VGYG S       K +P+WI+KNSWG  WGE 
Sbjct: 240 LLQFYRHGISHPWWIFCSKYLLDHAVLLVGYGVSE------KNEPFWIVKNSWGVEWGEK 293

Query: 341 GYYKICMGRNVCGVDSMVSS 360
           GY+++  G   CG+++  +S
Sbjct: 294 GYFRMYRGDGTCGINTGATS 313


>gi|321460289|gb|EFX71333.1| hypothetical protein DAPPUDRAFT_189155 [Daphnia pulex]
          Length = 266

 Score =  246 bits (629), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 129/273 (47%), Positives = 173/273 (63%), Gaps = 14/273 (5%)

Query: 93  TAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGV 152
           TAV+G T FSD + +E++    G N  LR      +   +P  DLP +FDWR+H  VT V
Sbjct: 3   TAVYGDTPFSDWSAAEYKAHLAGFNPSLRQSNARLRQAAIPEIDLPDEFDWRNHSVVTPV 62

Query: 153 KDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGL 212
           KDQG+CGSCW+FS TG +EG + +  G+L+SLSEQ+LVDCD           DSGCNGGL
Sbjct: 63  KDQGSCGSCWAFSVTGNVEGIYAVRNGDLLSLSEQELVDCD---------KLDSGCNGGL 113

Query: 213 MNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVK 272
             +A++ I   GG+E E DYPY G +   CKF+ +     V+    IS++E +MA  L++
Sbjct: 114 PENAYKAIHDIGGLETESDYPYNGHE-NKCKFNSNITRVQVTGGVEISTNETEMAQWLIQ 172

Query: 273 HGPLAVGINAVWMQTYIGGVSCPY--ICGK-YLDHGVLIVGYGSSGFAPIRFKEKPYWII 329
           +GP+++GINA  MQ Y GGVS P+  +C    +DHGVLIVGYG S + P   K  PYWI+
Sbjct: 173 NGPISIGINANAMQYYRGGVSHPWKVLCRPGGIDHGVLIVGYGVSQY-PKFNKTLPYWIV 231

Query: 330 KNSWGENWGENGYYKICMGRNVCGVDSMVSSVA 362
           KNSWG  WGE GYY++  G   CG++ M +S  
Sbjct: 232 KNSWGTRWGEQGYYRVFRGDGTCGLNQMCTSAT 264


>gi|390339264|ref|XP_791714.3| PREDICTED: putative cysteine proteinase CG12163-like
           [Strongylocentrotus purpuratus]
          Length = 453

 Score =  246 bits (629), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 130/310 (41%), Positives = 183/310 (59%), Gaps = 28/310 (9%)

Query: 53  FSLFKSKFSKTYATQE---EHDYRFRVFKANLRRAKR-RQLLDPTAVHGVTKFSDLTPSE 108
           F  F   F + Y   +   E++YR+ VF  N+   +   Q    TA +G TKF+D+T +E
Sbjct: 156 FDKFLMTFKREYRQNDGTNEYEYRYSVFVQNMLTVEMFNQFEQGTAKYGPTKFADMTEAE 215

Query: 109 FRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATG 168
           FR+   G  ++  +    +K   +P   +P ++DWR HGAVT VK+QG CGSCW+FSA G
Sbjct: 216 FRKLQSGPLKKTGI----KKQAAIPQGPVPEEYDWRTHGAVTPVKNQGMCGSCWAFSAIG 271

Query: 169 ALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVER 228
            +EG   +  GEL+SLSEQ+LVDCD           D GC GG M+ A+E I+K GG   
Sbjct: 272 NMEGQWQIKKGELISLSEQELVDCD---------KVDGGCEGGEMSDAYEAIIKLGGAMS 322

Query: 229 EKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTY 288
           E+ YPY G +   CKF+ + +   ++ +  IS +E +MA  L  HGP+++GINA+ MQ Y
Sbjct: 323 EEKYPYRG-ENEKCKFNMTDVRVKINGYVNISKNETEMAGWLAAHGPISIGINALMMQFY 381

Query: 289 IGGVSCPY--ICGK-YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKI 345
            GG++ P+   C    LDHGVLIVGY            +PYWI+KNSWG++WGE GYY +
Sbjct: 382 FGGIAHPWKIFCSPDSLDHGVLIVGYSVK-------DGEPYWIVKNSWGKDWGEEGYYLV 434

Query: 346 CMGRNVCGVD 355
             G   CG++
Sbjct: 435 YRGDGTCGLN 444


>gi|256077195|ref|XP_002574893.1| cathepsin F (C01 family) [Schistosoma mansoni]
 gi|353230782|emb|CCD77199.1| cathepsin F (C01 family) [Schistosoma mansoni]
          Length = 456

 Score =  246 bits (628), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 132/320 (41%), Positives = 193/320 (60%), Gaps = 27/320 (8%)

Query: 48  NAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTP 106
           N +  +  FK K+ K Y   E  + RF +FK+N+ +A+  Q+ +  +A++GVT +SDLT 
Sbjct: 153 NVDEKYVQFKLKYRKQY--HETDEIRFNIFKSNILKAQLYQVFERGSAIYGVTPYSDLTT 210

Query: 107 SEFRRQFLGLNRRLRLPADAQKAPI---LPTNDLPTDFDWRDHGAVTGVKDQGACGSCWS 163
            EF R  L       +P+     P       N++P +FDWR+ GAVT VK+QG CGSCW+
Sbjct: 211 DEFARTHL--TASWVVPSSRSNTPTSLGKEVNNIPKNFDWREKGAVTEVKNQGMCGSCWA 268

Query: 164 FSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA 223
           FS TG +E   F  TG+L+SLSEQQLVDCD           D GCNGGL ++A+E I+K 
Sbjct: 269 FSTTGNVESQWFRKTGKLLSLSEQQLVDCD---------GLDDGCNGGLPSNAYESIIKM 319

Query: 224 GGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAV 283
           GG+  E +YPY   +   C      +A  +++   ++ DE ++AA L  +  ++VG+NA+
Sbjct: 320 GGLMLEDNYPYDAKN-EKCHLKTDGVAVYINSSVNLTQDETELAAWLYHNSTISVGMNAL 378

Query: 284 WMQTYIGGVSCPY--ICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGEN 340
            +Q Y  G+S P+   C KY LDH VL+VGYG S       K +P+WI+KNSWG  WGEN
Sbjct: 379 LLQFYQHGISHPWWIFCSKYLLDHAVLLVGYGVSE------KNEPFWIVKNSWGVEWGEN 432

Query: 341 GYYKICMGRNVCGVDSMVSS 360
           GY+++  G   CG++++ +S
Sbjct: 433 GYFRMYRGDGTCGINTVATS 452


>gi|67773380|gb|AAY81947.1| cysteine protease 9 [Paragonimus westermani]
          Length = 322

 Score =  246 bits (627), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 139/322 (43%), Positives = 190/322 (59%), Gaps = 35/322 (10%)

Query: 48  NAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTP 106
           +A   +  FK  + K YA +++   RF +FK NL RA++ QL D  TA +GVT+FSDLTP
Sbjct: 22  SARELYEQFKRDYGKVYANEDDQK-RFAIFKDNLVRAQKLQLKDQGTARYGVTQFSDLTP 80

Query: 107 SEFRRQFLGLNRRLRLPADAQKAPILPT--NDLPTDFDWRDHGAVTGVKDQGACGSCWSF 164
            EF  ++L    R  +  D Q   + PT     P   DWR+ GAVT V++QG+CGSCW+F
Sbjct: 81  EEFAAKYL----RAAVNND-QVERVRPTGLKAAPERMDWREKGAVTAVENQGSCGSCWAF 135

Query: 165 SATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAG 224
           SA G +EG  F+ TG+LVSLS+QQLVDCD   +         GCNGG   S++  I   G
Sbjct: 136 SAAGNVEGQWFIKTGQLVSLSKQQLVDCDRVAE---------GCNGGWPVSSYLEIKHMG 186

Query: 225 GVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW 284
           G+E E DYPY G +  +C  +K K+ A + +  V+ + E++ AA L +HGPL+  +NAV 
Sbjct: 187 GLESESDYPYVGAE-QTCALNKEKLLAKIDDLIVLGAYEEEHAAYLAEHGPLSTLLNAVA 245

Query: 285 MQTYIGGV------SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWG 338
           +Q Y  GV       CP      L+H VL VGY   G       + PYWIIKNSWG +WG
Sbjct: 246 LQHYQSGVLNPTYEECP---DTELNHAVLTVGYDKEG-------DMPYWIIKNSWGTDWG 295

Query: 339 ENGYYKICMGRNVCGVDSMVSS 360
           E GY+++  G   CG++ M +S
Sbjct: 296 EKGYFRLFRGDYTCGINRMATS 317


>gi|85068706|gb|ABC69433.1| cysteine protease [Clonorchis sinensis]
          Length = 326

 Score =  246 bits (627), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 146/363 (40%), Positives = 196/363 (53%), Gaps = 47/363 (12%)

Query: 3   RLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSK 62
           RL +  +L+  + S LA    V  D                    NA   +  FK K+ K
Sbjct: 2   RLFVCCVLVTTIWSALARTTQVEPD--------------------NARALYEEFKLKYKK 41

Query: 63  TYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTPSEFRRQFLGLNRRLR 121
           TY+  ++ + RF +FK NL RAKR Q ++  TA +GVT+FSDLT  EF+ ++L    R+R
Sbjct: 42  TYSNDDD-ELRFEIFKDNLLRAKRLQEMEQGTAQYGVTQFSDLTSEEFKTRYL----RMR 96

Query: 122 LPADAQKAPILPTNDLPTD---FDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLST 178
                    + P  D+  D   FDWR+HGAV  V DQG CGSCW+FS  G + G  F  T
Sbjct: 97  FDGPIVSEDLTPEEDVTMDNEKFDWREHGAVGPVLDQGKCGSCWAFSVIGNVVGQWFRET 156

Query: 179 GELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTD 238
           G L++LS QQLVDCD+          D GC+GG     +  I K GG+E   DYPYTG  
Sbjct: 157 GHLLALSGQQLVDCDY---------LDDGCDGGYPPQTYTAIQKMGGLELASDYPYTGV- 206

Query: 239 GGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYIC 298
           GG C  DKSK  A V+  +++   E   A  L   GPL+  +NA  +Q Y GG+  P  C
Sbjct: 207 GGICHMDKSKFVAYVNGSTILPLSEKVQAQKLRAIGPLSSALNADTLQLYKGGIMRPKWC 266

Query: 299 GKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSM 357
               ++H VL VGYG           KPYWI+KNSWGE++GE GY++I  G   CG++S+
Sbjct: 267 DPAGVNHAVLTVGYGVQ-------NGKPYWIVKNSWGEDFGEEGYFRIYRGDGTCGINSI 319

Query: 358 VSS 360
           V++
Sbjct: 320 VTT 322


>gi|85068712|gb|ABC69436.1| cysteine protease [Clonorchis sinensis]
          Length = 328

 Score =  246 bits (627), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 148/365 (40%), Positives = 202/365 (55%), Gaps = 49/365 (13%)

Query: 3   RLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSK 62
           RL +  +L+  + S LA    V  D                    NA   +  FK K+ K
Sbjct: 2   RLFVCCVLVTTIWSALARTTQVEPD--------------------NARALYEEFKLKYKK 41

Query: 63  TYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTPSEFRRQFLGLNRRLR 121
           TY+  ++ + RF +FK NL RAKR Q ++  TA +GVT+FSDLT  EF+ ++L    R+R
Sbjct: 42  TYSNDDD-ELRFEIFKDNLLRAKRLQEMEQGTAQYGVTQFSDLTSEEFKTRYL----RMR 96

Query: 122 LPADAQKAPILPTNDLPTD---FDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLST 178
                      P  D+  D   FDWR+HGAV  V DQG CGSCW+FS  G +EG  F  T
Sbjct: 97  FDGPIVSEDPSPEEDVTMDNEKFDWREHGAVGPVLDQGKCGSCWAFSVIGNVEGQWFRKT 156

Query: 179 GELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTD 238
           G+L++LSEQQLVDCDH          + GCNGG     +  I K GG+E   DYPYTG D
Sbjct: 157 GDLLALSEQQLVDCDH---------LEKGCNGGYPPKTYGEIEKMGGLELASDYPYTGVD 207

Query: 239 GGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGV--SCPY 296
            G C  ++SK  A V++ +V+   E   A  L + GPL+  +NAV +Q Y+GG+    P+
Sbjct: 208 -GICYMNQSKFVAYVNDSTVLPLSEKIQAQKLKEIGPLSSALNAVLLQFYLGGIIFPIPF 266

Query: 297 ICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVD 355
           +C  + L+H VL VGYG+  F        PYWI+KNS G  +GE GY++I  G   CG++
Sbjct: 267 LCNPHGLNHAVLTVGYGTE-FG------IPYWIVKNSLGVGFGEKGYFRIFRGAGTCGIN 319

Query: 356 SMVSS 360
            +VS+
Sbjct: 320 LVVST 324


>gi|67773372|gb|AAY81943.1| cysteine protease 5 [Paragonimus westermani]
          Length = 325

 Score =  246 bits (627), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 139/324 (42%), Positives = 189/324 (58%), Gaps = 31/324 (9%)

Query: 48  NAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTP 106
           NA   +  FK  + K YA  ++   RF +FK NL RA++ QL D  TA +GVT+FSDLTP
Sbjct: 27  NARELYEQFKRDYGKVYANDDDQK-RFAIFKDNLVRAQKLQLKDRGTARYGVTQFSDLTP 85

Query: 107 SEFRRQFLGLNRRLRLPADAQKAPILPT--NDLPTDFDWRDHGAVTGVKDQGACGSCWSF 164
            EF  ++L        P + Q   + PT     P   DWR+ GAV  V++QG+CGSCW+F
Sbjct: 86  EEFAAKYLSR------PMNDQVERVRPTGLKAAPERMDWREWGAVGPVENQGSCGSCWAF 139

Query: 165 SATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAG 224
           S  G +EG  FL TG+LVSLS+QQLVDCD           D GC GG   +A+  I++ G
Sbjct: 140 SVAGNVEGQWFLKTGQLVSLSKQQLVDCD---------VMDYGCGGGWPTNAYMEIMRMG 190

Query: 225 GVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW 284
           G+E + DYPY G     C  +K K+ A + +  V+ + E++ AA L +HGPL+  +NA +
Sbjct: 191 GLELQSDYPYVGVQ-QQCYLNKEKLLAKIDDLIVLGAYEEEHAAYLAEHGPLSSALNAGY 249

Query: 285 MQTYIGGVSCPYI--CGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENG 341
           +Q Y  G+S P    C    L+H VL VGY +           PYWIIKNSWG  WGENG
Sbjct: 250 LQFYQSGISHPSYEECSPASLNHAVLTVGYDTENGV-------PYWIIKNSWGTGWGENG 302

Query: 342 YYKICMGRNVCGVDSMVSSVAAIH 365
           Y+++  G   CG++ M++S A IH
Sbjct: 303 YFRLYRGDGTCGINRMITS-AIIH 325


>gi|55979119|gb|AAV69023.1| cysteine protease [Opisthorchis viverrini]
 gi|224923980|gb|ACN68966.1| cathepsin F-like cysteine protease [Opisthorchis viverrini]
          Length = 326

 Score =  246 bits (627), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 138/321 (42%), Positives = 184/321 (57%), Gaps = 27/321 (8%)

Query: 48  NAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTP 106
           +A   +  FK K+ KTY+  ++ + RFR+FK NL RAKR Q ++  TA +GVT+FSDLT 
Sbjct: 27  DARALYEEFKLKYKKTYSNDDD-ELRFRIFKDNLERAKRLQAMEQGTAEYGVTQFSDLTS 85

Query: 107 SEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTD---FDWRDHGAVTGVKDQGACGSCWS 163
            EF+ ++L    R+R           P  D+  D   FDWRDHGAV  V DQG CGSCW+
Sbjct: 86  EEFKTRYL----RMRFDEPIVNEDPTPQEDVTMDNSNFDWRDHGAVGPVLDQGDCGSCWA 141

Query: 164 FSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA 223
           FS  G +EG  F  TG+L+ LSEQQL+DCDH          D GC+GG     +  I + 
Sbjct: 142 FSVIGNVEGQWFRKTGDLLGLSEQQLIDCDHS---------DQGCDGGYPPQTYSAIEEM 192

Query: 224 GGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAV 283
           GG+E   DYPYTG D G C  D+SK  A V+  + +   E   A +L + GPL+ G+NAV
Sbjct: 193 GGLELRSDYPYTGKD-GICYMDQSKFVAYVNGSTRLPWCEKTQAKSLKEIGPLSSGLNAV 251

Query: 284 WMQTYIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGY 342
            +Q Y  G+  P  C    L+H VL VGYG            PYWI+KNSWG+ +GE GY
Sbjct: 252 LLQLYKRGIMRPRWCNPAELNHAVLTVGYGME-------HRMPYWIVKNSWGKRFGEKGY 304

Query: 343 YKICMGRNVCGVDSMVSSVAA 363
           ++I  G   CG++  V++   
Sbjct: 305 FRIYRGDGTCGINRAVTTAVV 325


>gi|226468424|emb|CAX69889.1| Temporarily Assigned Gene name [Schistosoma japonicum]
          Length = 454

 Score =  245 bits (626), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 134/320 (41%), Positives = 196/320 (61%), Gaps = 28/320 (8%)

Query: 48  NAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTP 106
           N    ++ FK  + K Y  + +++ RF +FK+NL +A+  Q+L+  +AV+GVT +SDLT 
Sbjct: 152 NVGEMYAQFKLTYRKQYH-ETDNEKRFSIFKSNLLKAQLYQVLERGSAVYGVTPYSDLTT 210

Query: 107 SEFRRQFLGLNRRLRLPADAQKAPILP---TNDLPTDFDWRDHGAVTGVKDQGACGSCWS 163
            EF R  L    R    A +++  I P     D+P +FDWR  GAVT VK+QG CGSCW+
Sbjct: 211 DEFSRTHLTAPWR----ASSKRNTISPRREVGDIPNNFDWRKKGAVTEVKNQGMCGSCWA 266

Query: 164 FSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA 223
           FS TG +E   F  TG+L+SLSEQQLVDCD         + D GCNGGL ++A+E I++ 
Sbjct: 267 FSTTGNIESQWFRKTGKLLSLSEQQLVDCD---------NLDDGCNGGLPSNAYESIIRM 317

Query: 224 GGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAV 283
           GG+  E +YPY   +   C    + +AA +++   ++ DE ++A  L  H  ++VG+NA+
Sbjct: 318 GGLMLEDNYPYDAKN-EKCHLKVANVAAYINSSVNLTQDESELAIWLYHHSAISVGMNAL 376

Query: 284 WMQTYIGGVSCPY--ICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGEN 340
            +Q Y  G+S P+   C KY LDH VL+VGYG S       K +P+WI+KNSWG  WGE 
Sbjct: 377 LLQFYRHGISHPWWIFCSKYLLDHAVLLVGYGVSE------KNEPFWIVKNSWGVEWGEK 430

Query: 341 GYYKICMGRNVCGVDSMVSS 360
           GY+++  G   CG+++  +S
Sbjct: 431 GYFRMYRGDGTCGINTDATS 450


>gi|432091081|gb|ELK24293.1| Cathepsin F, partial [Myotis davidii]
          Length = 410

 Score =  245 bits (626), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 138/331 (41%), Positives = 191/331 (57%), Gaps = 34/331 (10%)

Query: 43  EDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKF 101
           +D  L     F  F + +++TY T+EE  +R  VF  N+ RA++ Q LD  TA +GVTKF
Sbjct: 103 QDFYLRMASLFKYFITTYNRTYETEEEAQWRMSVFINNMIRAQKIQALDRGTAQYGVTKF 162

Query: 102 SDLTPSEFRRQFLG------LNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQ 155
           SDLT  EFR  +L       L +++RL            +  P ++DWR  GAVT VK+Q
Sbjct: 163 SDLTEEEFRTMYLNPLLKEELGKKMRLVK-------FVGDPAPPEWDWRKKGAVTKVKNQ 215

Query: 156 GACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNS 215
           G CGSCW+FS TG +EG  FL  G+L+SLSEQ+LVDCD           D  C GGL ++
Sbjct: 216 GMCGSCWAFSVTGNVEGQWFLKRGDLLSLSEQELVDCD---------KVDKACMGGLPSN 266

Query: 216 AFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGP 275
           A+  I   GG+E E DY Y+G    +C F   K    +++   +S +E ++AA L K+GP
Sbjct: 267 AYSAIKTLGGLETEDDYSYSG-HLQTCSFSAQKAKVYINDSVELSHNEQELAAWLAKNGP 325

Query: 276 LAVGINAVWMQTYIGGVSCPY--ICGK-YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNS 332
           +++ INA  MQ Y  G+S P   +C + ++DH VL+VGYG+         + P+W IKNS
Sbjct: 326 ISIAINAFGMQFYRHGISRPLRPLCSRWFIDHAVLLVGYGNRS-------DVPFWAIKNS 378

Query: 333 WGENWGENGYYKICMGRNVCGVDSMVSSVAA 363
           WG +WGE GYY +  G   CGV+ M SS   
Sbjct: 379 WGTDWGEEGYYYLHRGSGACGVNVMASSAVV 409


>gi|85068700|gb|ABC69430.1| cysteine protease [Clonorchis sinensis]
          Length = 326

 Score =  245 bits (625), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 145/363 (39%), Positives = 196/363 (53%), Gaps = 47/363 (12%)

Query: 3   RLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSK 62
           RL +  +L+  + S LA    V  D                    NA   +  FK K+ K
Sbjct: 2   RLFVCCVLVTTIWSALARTTQVEPD--------------------NARALYEEFKLKYKK 41

Query: 63  TYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTPSEFRRQFLGLNRRLR 121
           TY+  ++ + RF +FK NL RAKR Q ++  TA +GVT+FSDLT  EF+ ++L    R+R
Sbjct: 42  TYSNDDD-ELRFEIFKDNLLRAKRLQEMEQGTAQYGVTQFSDLTSEEFKTRYL----RMR 96

Query: 122 LPADAQKAPILPTNDLPTD---FDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLST 178
                    + P  D+  D   FDWR+HGAV  V DQG CGSCW+FS  G + G  F  T
Sbjct: 97  FDGPIVSEDLTPEEDVTMDNEKFDWREHGAVGPVLDQGKCGSCWAFSVIGNVVGQWFRKT 156

Query: 179 GELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTD 238
           G L++LSEQ LVDCD+          D GC+GG        I K GG+E   DYPYTG  
Sbjct: 157 GHLLALSEQPLVDCDY---------LDGGCDGGYPPQTNTAIQKMGGLELASDYPYTGV- 206

Query: 239 GGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYIC 298
           GG C  DKSK  A ++  +++   E   A  L   GPL+  +NA  +Q Y GG+  P +C
Sbjct: 207 GGICYMDKSKFVAYINGSTILPLSEKVQAQKLRAIGPLSSALNADTLQLYKGGIMRPRLC 266

Query: 299 GKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSM 357
               ++H VL VGYG           KPYWI+KNSWGE++GE GY++I  G   CG++S+
Sbjct: 267 DPAGVNHAVLTVGYGVQ-------NGKPYWIVKNSWGEDFGEEGYFRIYRGDGTCGINSI 319

Query: 358 VSS 360
           V++
Sbjct: 320 VTT 322


>gi|209978824|ref|YP_002300567.1| cathepsin [Adoxophyes orana nucleopolyhedrovirus]
 gi|192758806|gb|ACF05341.1| cathepsin [Adoxophyes orana nucleopolyhedrovirus]
          Length = 337

 Score =  244 bits (623), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 132/354 (37%), Positives = 201/354 (56%), Gaps = 39/354 (11%)

Query: 30  MIRQVVPSDGEQSEDHLL----NAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAK 85
           MI  ++     Q E HL     +A+H+F  F   ++K YA  +  +YRF++F  NL    
Sbjct: 5   MIFTILLVASSQIEGHLKFDIHDAQHYFETFIVNYNKQYADTKTKNYRFKIFVQNLEYIN 64

Query: 86  RRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQK------------APILP 133
            +  L+ +A++ + KFSDL+ +E   ++ GL  R   P++  K            AP   
Sbjct: 65  EKNKLNDSAIYNINKFSDLSKNELLTKYTGLTSRK--PSNMVKSTSNFCNVIHLDAPPDA 122

Query: 134 TNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCD 193
            ++LP +FDWR +  +T VKDQGACGSCW+ +A G LE  + +    L++LSEQQL+DCD
Sbjct: 123 RDELPQNFDWRVNNKMTSVKDQGACGSCWAHAAVGTLETLYAIKHNYLINLSEQQLIDCD 182

Query: 194 HECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAV 253
                    S +  C+GGLM++AFE ++ AGG+  E DYPY GT  G CK D  K A +V
Sbjct: 183 ---------SANMACDGGLMHTAFEQLMNAGGLMEEIDYPYQGTK-GICKIDNKKFALSV 232

Query: 254 SNFS-VISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKY-LDHGVLIVGY 311
           S+    I  +E+ +   L+  GP+A+ I+A  + TY  G+   + C    L+H VL+VGY
Sbjct: 233 SSCKRYIFQNEENLKKELITTGPIAMAIDAASISTYSKGI--IHFCENLGLNHAVLLVGY 290

Query: 312 GSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIH 365
           G+ G          YW +KNSWG +WGE+GY+++    N CG+++ +++ A IH
Sbjct: 291 GTEGGV-------SYWTLKNSWGSDWGEDGYFRVKRNINACGLNNQLAASATIH 337


>gi|3023456|sp|Q26534.1|CATL_SCHMA RecName: Full=Cathepsin L; AltName: Full=SMCL1; Flags: Precursor
 gi|555663|gb|AAC46485.1| preprocathepsin L [Schistosoma mansoni]
 gi|1094710|prf||2106314A cathepsin L
          Length = 319

 Score =  244 bits (623), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 132/320 (41%), Positives = 194/320 (60%), Gaps = 26/320 (8%)

Query: 48  NAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQL-LDPTAVHGVTKFSDLTP 106
           N +  +  FK K+ K Y  + E + RF +FK+N+ +A+  Q+ +  +A++GVT +SDLT 
Sbjct: 15  NVDEKYVQFKLKYRKQYH-ETEDEIRFNIFKSNILKAQLYQVFVRGSAIYGVTPYSDLTT 73

Query: 107 SEFRRQFLGLNRRLRLPADAQKAPI---LPTNDLPTDFDWRDHGAVTGVKDQGACGSCWS 163
            EF R  L       +P+     P       N++P +FDWR+ GAVT VK+QG CGSCW+
Sbjct: 74  DEFARTHL--TASWVVPSSRSNTPTSLGKEVNNIPKNFDWREKGAVTEVKNQGMCGSCWA 131

Query: 164 FSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA 223
           FS TG +E   F  TG+L+SLSEQQLVDCD           D GCNGGL ++A+E I+K 
Sbjct: 132 FSTTGNVESQWFRKTGKLLSLSEQQLVDCD---------GLDDGCNGGLPSNAYESIIKM 182

Query: 224 GGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAV 283
           GG+  E +YPY   +   C      +A  +++   ++ DE ++AA L  +  ++VG+NA+
Sbjct: 183 GGLMLEDNYPYDAKN-EKCHLKTDGVAVYINSSVNLTQDETELAAWLYHNSTISVGMNAL 241

Query: 284 WMQTYIGGVSCPY--ICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGEN 340
            +Q Y  G+S P+   C KY LDH VL+VGYG S       K +P+WI+KNSWG  WGEN
Sbjct: 242 LLQFYQHGISHPWWIFCSKYLLDHAVLLVGYGVSE------KNEPFWIVKNSWGVEWGEN 295

Query: 341 GYYKICMGRNVCGVDSMVSS 360
           GY+++  G   CG++++ +S
Sbjct: 296 GYFRMYRGDGSCGINTVATS 315


>gi|198427474|ref|XP_002119872.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
          Length = 596

 Score =  244 bits (623), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 131/296 (44%), Positives = 182/296 (61%), Gaps = 22/296 (7%)

Query: 53  FSLFKSKFSKTYATQ-EEHDYRFRVFKANLRRAKR-RQLLDPTAVHGVTKFSDLTPSEFR 110
           F +F  K+ +TY++  +E++ RF +FK N +  +   ++   TAV+G+TKF D++  E+ 
Sbjct: 169 FDMFLEKYPRTYSSSSDEYNERFEIFKTNYQVVQHLNEIERGTAVYGITKFMDMSEEEYH 228

Query: 111 RQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGAL 170
           R       R  +P     +  L T ++P   DWR HGAVT VK+QG+CGSCW+FS TG +
Sbjct: 229 RTLAPGFTRPLVPIQTLNSAELDTTNIPDSMDWRKHGAVTEVKNQGSCGSCWAFSTTGNV 288

Query: 171 EGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREK 230
           EG  FL   +L+SLSEQ+LVDCD         + DSGC GGL ++A++ I K GG+E EK
Sbjct: 289 EGQWFLKHKKLISLSEQELVDCD---------TLDSGCGGGLPSNAYKSIEKLGGLEPEK 339

Query: 231 DYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIG 290
           DYPY G +G  C   +S     V+N   +  DE ++AA L ++GP+++GINA  MQ Y G
Sbjct: 340 DYPYVG-EGEKCAIKQSDFKVFVNNSVALPKDEVKLAAWLAQNGPISIGINANLMQFYWG 398

Query: 291 GVSCPY--ICG-KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYY 343
           G+S P+   C  K LDHGVLIVGYG+           P+WIIKNSWG +WGE   Y
Sbjct: 399 GISHPWKIFCNPKSLDHGVLIVGYGTE-------NGTPFWIIKNSWGPDWGEEEEY 447



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 53/115 (46%), Positives = 70/115 (60%), Gaps = 9/115 (7%)

Query: 108 EFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSAT 167
           E+ R       R  +P     +  L T ++P   DWR HGAVT VK+QG+CGSCW+FS T
Sbjct: 446 EYHRTLAPGFTRPLVPIQTLNSAELDTTNIPDSMDWRKHGAVTEVKNQGSCGSCWAFSTT 505

Query: 168 GALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK 222
           G +EG  FL   +L+SLSEQ+LVDCD         + DSGC GGL ++A++ I K
Sbjct: 506 GNVEGQWFLKHKKLISLSEQELVDCD---------TLDSGCGGGLPSNAYKSIEK 551



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 28/36 (77%)

Query: 325 PYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSS 360
           P+WIIKNSWG +WGE GYY+I  G   CG+++M +S
Sbjct: 557 PFWIIKNSWGPDWGEEGYYRIYRGDGSCGLNNMATS 592


>gi|46948154|gb|AAT07059.1| cathepsin F-like cysteine proteinase, partial [Brugia malayi]
          Length = 461

 Score =  244 bits (623), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 132/319 (41%), Positives = 185/319 (57%), Gaps = 31/319 (9%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTPSEFRR 111
           F  F  KF + Y++ EE   RFR++  N+  AK+ Q  +  TA++G TKFSD+T  EF++
Sbjct: 159 FMTFIKKFKREYSSIEEQLDRFRIYLQNMNFAKKLQFEEKGTAIYGATKFSDMTAEEFQK 218

Query: 112 QFLGLNRRLRLPADAQKAPI----LPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSAT 167
             L      R+ ++     +    L   +LP+ FDWR  G VT VKDQG+CGSCW+FS T
Sbjct: 219 IMLPSIWWDRVESNGITFNLNDFNLSIYNLPSKFDWRTEGVVTPVKDQGSCGSCWAFSVT 278

Query: 168 GALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVE 227
           G +E    + TG+L+SLSEQ+L+DCD           D GCNGGL  +AF  I + GG+E
Sbjct: 279 GNIESLWAIKTGKLISLSEQELIDCD---------VIDKGCNGGLPINAFREIKRMGGLE 329

Query: 228 REKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQT 287
            E  YPY   + G+C   +++IA ++ +   I  +E  M A + + GPL+VGI+A  +  
Sbjct: 330 PEDQYPYEAKN-GTCHLVRAQIAVSIDDAVEIPRNETVMKAWIAQRGPLSVGIDAELLSY 388

Query: 288 YIGGV------SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENG 341
           Y  G+       CP      ++HGVLI GYG            PYW IKNSWGE WGENG
Sbjct: 389 YKSGILHPSKSRCP---PSKINHGVLITGYGIEN-------NLPYWTIKNSWGEQWGENG 438

Query: 342 YYKICMGRNVCGVDSMVSS 360
           Y+++  G+N+CGV  +VSS
Sbjct: 439 YFQLMRGKNICGVSDLVSS 457


>gi|56718881|gb|AAW28151.1| westerpain-1 [Paragonimus westermani]
          Length = 322

 Score =  243 bits (621), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 136/322 (42%), Positives = 185/322 (57%), Gaps = 35/322 (10%)

Query: 48  NAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTP 106
           +A   +  FK  + K YA +++   RF +FK NL RA++ QL D  TA +GVT+FSDLTP
Sbjct: 22  SARELYEQFKRDYGKVYANEDDQK-RFAIFKDNLMRAQKLQLKDQGTARYGVTQFSDLTP 80

Query: 107 SEFRRQFLGLNRRLRLPADAQKAPILPT--NDLPTDFDWRDHGAVTGVKDQGACGSCWSF 164
            EF  ++L          + Q   + PT     P   DWR  GAVT V++QG+CGSCW+F
Sbjct: 81  EEFAAKYLSAPVN-----NDQVKRVRPTGLKAAPERIDWRAKGAVTAVENQGSCGSCWAF 135

Query: 165 SATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAG 224
           S  G +EG  F+ TG+LVSLS+QQLVDCD             GCNGG   S++  I+  G
Sbjct: 136 STAGNVEGQWFIKTGQLVSLSKQQLVDCDRAA---------QGCNGGWPASSYLEIMYMG 186

Query: 225 GVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW 284
           G+E E DYPY G +  +C  +K K+ A + +  V+  +E+  AA L +HGPL+  +NAV 
Sbjct: 187 GLESESDYPYVGVE-QTCALNKEKLVAKIDDSIVLGPEEEDHAAYLAEHGPLSTLLNAVA 245

Query: 285 MQTYIGGV------SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWG 338
           +Q Y  GV       CP      L+H VL VGY   G       + PYWIIKNSWG +WG
Sbjct: 246 LQYYQSGVLKPTFEECP---DTELNHAVLTVGYDKEG-------DMPYWIIKNSWGTDWG 295

Query: 339 ENGYYKICMGRNVCGVDSMVSS 360
           E GY+++  G   CG++ M +S
Sbjct: 296 EKGYFRLFRGDCTCGINRMATS 317


>gi|56718883|gb|AAW28152.1| westerpain-10 [Paragonimus westermani]
          Length = 327

 Score =  243 bits (621), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 137/322 (42%), Positives = 185/322 (57%), Gaps = 35/322 (10%)

Query: 48  NAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTP 106
           +A   +  FK  + K YA +++   RF +FK NL RA++ QL D  TA +GVT+FSDLTP
Sbjct: 27  SARELYEQFKRGYGKVYANEDDQK-RFAIFKDNLVRAQKLQLKDQGTARYGVTQFSDLTP 85

Query: 107 SEFRRQFLGLNRRLRLPADAQKAPILPT--NDLPTDFDWRDHGAVTGVKDQGACGSCWSF 164
            EF  ++L          D Q   + PT     P   DWR  GAVT V++QG+CGSCW+F
Sbjct: 86  EEFAAKYLSAPVN-----DDQVKRMRPTGLKAAPERIDWRAKGAVTAVENQGSCGSCWAF 140

Query: 165 SATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAG 224
           S  G +EG  F+ TG+LVSLS+QQLVDCD             GCNGG   S++  I+  G
Sbjct: 141 STAGNVEGQWFIKTGQLVSLSKQQLVDCDRAA---------QGCNGGWPASSYLEIMYMG 191

Query: 225 GVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW 284
           G+E E DYPY G +  +C  +K K+ A + +  V+  +E+  AA L +HGPL+  +NAV 
Sbjct: 192 GLESESDYPYVGVE-QTCALNKEKLVAKIDDSIVLGPEEEDHAAYLAEHGPLSTLLNAVA 250

Query: 285 MQTYIGGV------SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWG 338
           +Q Y  GV       CP      L+H VL VGY   G       + PYWIIKNSWG +WG
Sbjct: 251 LQHYQSGVLKPTFDECP---DTELNHAVLTVGYDKEG-------DMPYWIIKNSWGTDWG 300

Query: 339 ENGYYKICMGRNVCGVDSMVSS 360
           E GY+++  G   CG++ M +S
Sbjct: 301 EKGYFRLFRGDCTCGINRMATS 322


>gi|18419649|gb|AAL69389.1|AF462226_1 putative cysteine proteinase [Narcissus pseudonarcissus]
          Length = 136

 Score =  243 bits (620), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 112/132 (84%), Positives = 123/132 (93%)

Query: 236 GTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCP 295
           G DG  CK DKSKIAA+VSNFSV+S DE+Q+AANLV+HGPLA+GINA +MQTYIGGVSCP
Sbjct: 2   GMDGAVCKLDKSKIAASVSNFSVVSIDEEQIAANLVQHGPLAIGINAAFMQTYIGGVSCP 61

Query: 296 YICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVD 355
           YICGK+LDHGVL+VGYGSSG+APIRFKEKPYWIIKNSWGENWGE GYYKIC GRNVCGVD
Sbjct: 62  YICGKHLDHGVLLVGYGSSGWAPIRFKEKPYWIIKNSWGENWGEKGYYKICKGRNVCGVD 121

Query: 356 SMVSSVAAIHTT 367
           SMVS+V AIHTT
Sbjct: 122 SMVSTVTAIHTT 133


>gi|339246873|ref|XP_003375070.1| viral cathepsin [Trichinella spiralis]
 gi|316971622|gb|EFV55373.1| viral cathepsin [Trichinella spiralis]
          Length = 496

 Score =  242 bits (618), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 132/314 (42%), Positives = 190/314 (60%), Gaps = 21/314 (6%)

Query: 52  HFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTPSEFR 110
            F  F   F K Y +++E   R+ +FK N++  +  Q  +  TAV+GVT F+DLTP EFR
Sbjct: 195 QFKEFLKTFKKWYLSEKELLKRYDIFKVNMKTVEMLQKNEQGTAVYGVTFFADLTPEEFR 254

Query: 111 RQFLGLN-RRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGA 169
           + +L    +R +LP   Q+   +P   +   +DWR+H AVT VK+QG CGSCW+F+    
Sbjct: 255 KFYLSPQWKRDQLP---QRKASIPKGKIEDRWDWREHNAVTEVKNQGMCGSCWAFATIAN 311

Query: 170 LEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVERE 229
           +EG   +  GELVSLSEQ+LVDCD         + D GC+GG  ++A++ I++ GG+  E
Sbjct: 312 VEGVWAVKKGELVSLSEQELVDCD---------TLDQGCSGGYPSNAYKEIIRLGGLTTE 362

Query: 230 KDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYI 289
            +Y Y G + G+C+F        +++   +  DE ++AA + ++GP+AVGINA  M  Y 
Sbjct: 363 TNYSYDG-NQGTCRFKTQNAKVYINDSVSLPEDETEIAAYIRENGPVAVGINAFAMMFYR 421

Query: 290 GGVSCP--YICG-KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKIC 346
            G++ P  ++C    LDHGV IVGY     +    K KPYWIIKNSWG +WGE GYY + 
Sbjct: 422 HGIAHPWRFLCSPDALDHGVAIVGYDVEKQSK---KPKPYWIIKNSWGTHWGEGGYYMLY 478

Query: 347 MGRNVCGVDSMVSS 360
            G  VCGV+ MV+S
Sbjct: 479 RGAGVCGVNKMVTS 492


>gi|323713472|gb|ADY04490.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713476|gb|ADY04492.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713480|gb|ADY04494.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713482|gb|ADY04495.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713484|gb|ADY04496.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713486|gb|ADY04497.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713488|gb|ADY04498.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713490|gb|ADY04499.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713492|gb|ADY04500.1| cysteine protease [Clarkia xantiana var. xantiana]
          Length = 138

 Score =  242 bits (617), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 109/137 (79%), Positives = 127/137 (92%)

Query: 210 GGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAAN 269
           GGLMNSAFEY LKAGG+ +E+DYPYTGTD GSCKF+KSKIAA+V+NFSV+S DEDQ+AAN
Sbjct: 1   GGLMNSAFEYTLKAGGLMKEEDYPYTGTDKGSCKFEKSKIAASVANFSVVSLDEDQIAAN 60

Query: 270 LVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWII 329
           LVK+GPLA+ INAV+MQTY+GGVSCPYIC K LDHGVL+VGYGSSG++P+R KEKPYWII
Sbjct: 61  LVKNGPLAIAINAVFMQTYMGGVSCPYICSKRLDHGVLLVGYGSSGYSPVRMKEKPYWII 120

Query: 330 KNSWGENWGENGYYKIC 346
           KNSWG+ WGE G+YKIC
Sbjct: 121 KNSWGDKWGEEGFYKIC 137


>gi|340053965|emb|CCC48258.1| cysteine peptidase precursor [Trypanosoma vivax Y486]
          Length = 441

 Score =  242 bits (617), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 137/318 (43%), Positives = 179/318 (56%), Gaps = 26/318 (8%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEF 109
           E  F+ FK K+ ++Y T  E  +R RVF+ N+RR++     +P A  GVT FSDLTP EF
Sbjct: 31  EPLFAAFKQKYGRSYGTAAEEAFRLRVFEDNMRRSRMYAAANPHATFGVTPFSDLTPEEF 90

Query: 110 RRQFLGLNRRLRLPADAQKAPI-LPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATG 168
           R ++    R         +  + +P    P   DWR  GAVT VKDQG+CGSCWSFSA G
Sbjct: 91  RTRYHNGERHFEAARGRVRTLVQVPPGKAPAAVDWRRKGAVTPVKDQGSCGSCWSFSAIG 150

Query: 169 ALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK--AGGV 226
            +EG    +   L SLSEQ LV CD +         D+GC GGLM++AFE+I+K  +G V
Sbjct: 151 NIEGQWAAAGNPLTSLSEQMLVSCDTK---------DNGCGGGLMDNAFEWIVKENSGKV 201

Query: 227 EREKDYPYT--GTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW 284
             EK YPY   G +   CK    K+ A ++    I  DED +A  L  +GP+AV ++A  
Sbjct: 202 YTEKSYPYVSGGGEEPPCKPRGHKVGATITGHVDIPHDEDAIAKYLADNGPVAVAVDATT 261

Query: 285 MQTYIGGV--SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGY 342
             +Y GGV  SC     + L+HGVL+VGY  S        + PYWIIKNSW  +WGE GY
Sbjct: 262 FMSYSGGVVTSC---TSEALNHGVLLVGYNDS-------SKPPYWIIKNSWSSSWGEKGY 311

Query: 343 YKICMGRNVCGVDSMVSS 360
            +I  G N C V  + SS
Sbjct: 312 IRIEKGTNQCLVAQLASS 329


>gi|29567137|ref|NP_818699.1| cathepsin [Adoxophyes honmai NPV]
 gi|37076951|sp|Q80LP4.1|CATV_NPVAH RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|29467913|dbj|BAC67303.1| cathepsin [Adoxophyes honmai NPV]
          Length = 337

 Score =  241 bits (616), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 130/354 (36%), Positives = 201/354 (56%), Gaps = 39/354 (11%)

Query: 30  MIRQVVPSDGEQSEDHLL----NAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAK 85
           MI  ++     Q E HL     +A+H+F  F   ++K Y   +  +YRF++FK NL    
Sbjct: 5   MIFTILLVASSQIEGHLKFDIHDAQHYFETFIINYNKQYPDTKTKNYRFKIFKQNLEDIN 64

Query: 86  RRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQK------------APILP 133
            +  L+ +A++ + KFSDL+ +E   ++ GL  +   P++  +            AP   
Sbjct: 65  EKNKLNDSAIYNINKFSDLSKNELLTKYTGLTSKK--PSNMVRSTSNFCNVIHLDAPPDV 122

Query: 134 TNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCD 193
            ++LP +FDWR +  +T VKDQGACGSCW+ +A G LE  + +    L++LSEQQL+DCD
Sbjct: 123 HDELPQNFDWRVNNKMTSVKDQGACGSCWAHAAVGTLETLYAIKHNYLINLSEQQLIDCD 182

Query: 194 HECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAV 253
                    S +  C+GGLM++AFE ++ AGG+  E DYPY GT  G CK D  K A +V
Sbjct: 183 ---------SANMACDGGLMHTAFEQLMNAGGLMEEIDYPYQGTK-GVCKIDNKKFALSV 232

Query: 254 SNFS-VISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKY-LDHGVLIVGY 311
           S+    I  +E+ +   L+  GP+A+ I+A  + TY  G+   + C    L+H VL+VGY
Sbjct: 233 SSCKRYIFQNEENLKKELITMGPIAMAIDAASISTYSKGI--IHFCENLGLNHAVLLVGY 290

Query: 312 GSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIH 365
           G+ G          YW +KNSWG +WGE+GY+++    N CG+++ +++ A IH
Sbjct: 291 GTEGGV-------SYWTLKNSWGSDWGEDGYFRVKRNINACGLNNQLAASATIH 337


>gi|343412462|emb|CCD21670.1| cysteine peptidase (CP), putative [Trypanosoma vivax Y486]
          Length = 367

 Score =  241 bits (616), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 137/318 (43%), Positives = 178/318 (55%), Gaps = 26/318 (8%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEF 109
           E  F+ FK K+ ++Y T  E  +R RVF+ N+RR++     +P A  GVT FSDLTP EF
Sbjct: 31  EPLFAAFKQKYGRSYGTAAEEAFRLRVFEDNMRRSRMYAAANPHATFGVTPFSDLTPEEF 90

Query: 110 RRQFLGLNRRLRLPADAQKAPI-LPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATG 168
           R ++    R         +  + +P    P   DWR  GAVT VKDQG CGSCWSFSA G
Sbjct: 91  RTRYHNGERHFEAARGRVRTLVQVPPGKAPAAVDWRRKGAVTPVKDQGTCGSCWSFSAIG 150

Query: 169 ALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK--AGGV 226
            +EG    +   L SLSEQ LV CD +         D+GC GGLM++AFE+I+K  +G V
Sbjct: 151 NIEGQWAAAGNPLTSLSEQMLVSCDTK---------DNGCGGGLMDNAFEWIVKENSGKV 201

Query: 227 EREKDYPYT--GTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW 284
             EK YPY   G +   CK    K+ A ++    I  DED +A  L  +GP+AV ++A  
Sbjct: 202 YTEKSYPYVSGGGEEPPCKPRGHKVGATITGHVDIPHDEDAIAKYLADNGPVAVAVDATT 261

Query: 285 MQTYIGGV--SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGY 342
             +Y GGV  SC     + L+HGVL+VGY  S        + PYWIIKNSW  +WGE GY
Sbjct: 262 FMSYSGGVVTSC---TSEALNHGVLLVGYNDS-------SKPPYWIIKNSWSSSWGEKGY 311

Query: 343 YKICMGRNVCGVDSMVSS 360
            +I  G N C V  + SS
Sbjct: 312 IRIEKGTNQCLVAQLASS 329


>gi|16076439|emb|CAC94444.1| cysteine proteinase [Betula pendula]
          Length = 133

 Score =  241 bits (616), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 110/133 (82%), Positives = 125/133 (93%)

Query: 193 DHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAA 252
           DHECDPEE G+CDSGC+GGLM +AFEY LKAGG+EREKDYPYTGTD GSCKFDKSKIAA+
Sbjct: 1   DHECDPEEYGACDSGCSGGLMTTAFEYTLKAGGLEREKDYPYTGTDRGSCKFDKSKIAAS 60

Query: 253 VSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYG 312
           VSNFSV+S DEDQ+AANLVK+GPLA+GINA +MQTY+ GVSCPYICG+ LDHGVL+VGYG
Sbjct: 61  VSNFSVVSIDEDQIAANLVKNGPLAIGINAAFMQTYMKGVSCPYICGRRLDHGVLLVGYG 120

Query: 313 SSGFAPIRFKEKP 325
           S+GF+PIRFKEKP
Sbjct: 121 SAGFSPIRFKEKP 133


>gi|182892046|gb|AAI65744.1| Ctsf protein [Danio rerio]
          Length = 473

 Score =  241 bits (615), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 134/312 (42%), Positives = 185/312 (59%), Gaps = 21/312 (6%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTPSEFRR 111
           F  F   +++TY++QEE + R R+F+ N++ A+  Q L+  +A +G+TKFSDLT  EFR 
Sbjct: 175 FKNFMITYNRTYSSQEEAEKRLRIFQQNMKTAQTLQSLEQGSAEYGITKFSDLTEDEFRM 234

Query: 112 QFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALE 171
            +L             K  I  +   P  +DWRDHGAV+ VK+QG CGSCW+FS TG +E
Sbjct: 235 MYLNPMLSQWSLKKEMKPAIPASAPAPDTWDWRDHGAVSPVKNQGMCGSCWAFSVTGNIE 294

Query: 172 GAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKD 231
           G  F  TG+L+SLSEQ+LVDCD           D  C GGL ++A+E I   GG+E E D
Sbjct: 295 GQWFKKTGQLLSLSEQELVDCD---------KLDQACGGGLPSNAYEAIENLGGLETETD 345

Query: 232 YPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGG 291
           Y YTG    SC F   K+AA +++   +  DE ++AA L ++GP++  +NA  MQ Y  G
Sbjct: 346 YSYTGHK-QSCDFSTGKVAAYINSSVELPKDEKEIAAFLAENGPVSAALNAFAMQFYRKG 404

Query: 292 VSCPY--ICGKYL-DHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMG 348
           VS P    C  ++ DH VL+VG+G            P+W IKNSWGE++GE GYY +  G
Sbjct: 405 VSHPLKIFCNPWMIDHAVLLVGFGQRNGV-------PFWAIKNSWGEDYGEQGYYYLYRG 457

Query: 349 RNVCGVDSMVSS 360
             +CG+  M SS
Sbjct: 458 SGLCGIHKMCSS 469


>gi|74273320|gb|ABA01328.1| secreted cathepsin F [Teladorsagia circumcincta]
          Length = 364

 Score =  241 bits (615), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 133/328 (40%), Positives = 182/328 (55%), Gaps = 31/328 (9%)

Query: 47  LNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLT 105
             A +HF+ F  +  K Y  + E   RF +FK NL   +  Q  D  TA++G+ +F+DL+
Sbjct: 58  FGAWNHFTSFIERHDKVYRNESEALKRFGIFKRNLEIIRSAQENDKGTAIYGINQFADLS 117

Query: 106 PSEFRRQFLG--------LNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGA 157
           P EF++  L          NR + L A+     + P   LP  FDWR+HGAVT VK +G 
Sbjct: 118 PEEFKKTHLPHTWKQPDHPNRIVDLAAEG----VDPKEPLPESFDWREHGAVTKVKTEGH 173

Query: 158 CGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAF 217
           C +CW+FS TG +EG  FL+  +LVSLS QQL+DCD           D GCNGG    A+
Sbjct: 174 CAACWAFSVTGNIEGQWFLAKKKLVSLSAQQLLDCD---------VVDEGCNGGFPLDAY 224

Query: 218 EYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLA 277
           + I++ GG+E E  YPY       C+   S IA  ++    +  DE++M A LVK GP++
Sbjct: 225 KEIVRMGGLEPEDKYPYEAK-AEQCRLVPSDIAVYINGSVELPHDEEKMRAWLVKKGPIS 283

Query: 278 VGINAVWMQTYIGGVSCPYICG-KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGEN 336
           +GI    +Q Y GGVS P  C    + HG L+VGYG         K  PYWIIKNSWG N
Sbjct: 284 IGITVDDIQFYKGGVSRPTTCRLSSMIHGALLVGYGVE-------KNIPYWIIKNSWGPN 336

Query: 337 WGENGYYKICMGRNVCGVDSMVSSVAAI 364
           WGE+GYY++  G N C ++   +S   +
Sbjct: 337 WGEDGYYRMVRGENACRINRFPTSAVVL 364


>gi|117606135|ref|NP_001071036.1| cathepsin F precursor [Danio rerio]
 gi|115313533|gb|AAI24244.1| Cathepsin F [Danio rerio]
          Length = 473

 Score =  241 bits (615), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 134/312 (42%), Positives = 185/312 (59%), Gaps = 21/312 (6%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTPSEFRR 111
           F  F   +++TY++QEE + R R+F+ N++ A+  Q L+  +A +G+TKFSDLT  EFR 
Sbjct: 175 FKNFMITYNRTYSSQEEAEKRLRIFQQNMKTAQTLQSLEQGSAEYGITKFSDLTEDEFRM 234

Query: 112 QFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALE 171
            +L             K  I  +   P  +DWRDHGAV+ VK+QG CGSCW+FS TG +E
Sbjct: 235 MYLNPMLSQWSLKKEMKPAIPASAPAPDTWDWRDHGAVSPVKNQGMCGSCWAFSVTGNIE 294

Query: 172 GAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKD 231
           G  F  TG+L+SLSEQ+LVDCD           D  C GGL ++A+E I   GG+E E D
Sbjct: 295 GQWFKKTGQLLSLSEQELVDCD---------KLDQACGGGLPSNAYEAIENLGGLETETD 345

Query: 232 YPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGG 291
           Y YTG    SC F   K+AA +++   +  DE ++AA L ++GP++  +NA  MQ Y  G
Sbjct: 346 YSYTGHK-QSCDFSTGKVAAYINSSVELPKDEKEIAAFLAENGPVSAALNAFAMQFYRKG 404

Query: 292 VSCPY--ICGKYL-DHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMG 348
           VS P    C  ++ DH VL+VG+G            P+W IKNSWGE++GE GYY +  G
Sbjct: 405 VSHPLKIFCNPWMIDHAVLLVGFGQRNGV-------PFWAIKNSWGEDYGEQGYYYLYRG 457

Query: 349 RNVCGVDSMVSS 360
             +CG+  M SS
Sbjct: 458 SGLCGIHKMCSS 469


>gi|290999038|ref|XP_002682087.1| predicted protein [Naegleria gruberi]
 gi|284095713|gb|EFC49343.1| predicted protein [Naegleria gruberi]
          Length = 349

 Score =  240 bits (613), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 134/359 (37%), Positives = 194/359 (54%), Gaps = 58/359 (16%)

Query: 39  GEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLL-------- 90
           G   E   LN   +F  FK  + K YAT+EEH  R+++F  N+    +  ++        
Sbjct: 4   GAYDEKEALN---YFQHFKKLYLKRYATEEEHHRRWKIFYDNINLVNQLNIMHKPNEIAG 60

Query: 91  DPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQK----APILP-----TNDLPTDF 141
            P A +G+T+F D++P+EF R  L       LP   QK     P  P      + LP  F
Sbjct: 61  KPVAQYGITQFMDMSPNEFARVKL-------LPPTKQKDINHTPTAPKEKYQIDALPESF 113

Query: 142 DWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEES 201
           DWR+HGAVT VKDQ +CGSCW+FS    +EGA+FL+   L   S QQLVDCD        
Sbjct: 114 DWREHGAVTAVKDQASCGSCWAFSTVENIEGAYFLAGHNLTKFSPQQLVDCD-------- 165

Query: 202 GSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGG--------------------S 241
            + + GC GG    A +YI K GG+  E  YPY     G                    +
Sbjct: 166 -NLNCGCFGGFPFIAMQYIQKRGGLATESSYPYCIPPLGNCFPCNTNKTYCPSGEYCNRT 224

Query: 242 CKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKY 301
           C     ++ A V+ +  +S +ED +AA LVK+GPL++ +NA+W+Q Y  G+S P  C   
Sbjct: 225 CSVQNYQLVAKVAGYENVSQNEDDIAAYLVKNGPLSICLNAMWLQFYHSGISDPMYCPPD 284

Query: 302 LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSS 360
           +DH VL+VG+G+        ++  YWI+KNSWGE+WGE GY+++  G++ CG+++MV++
Sbjct: 285 IDHAVLLVGFGTH--TNWLGEKTNYWIVKNSWGESWGEKGYFRLIRGKDKCGINTMVAN 341


>gi|559532|emb|CAA57675.1| cysteine proteinase [Zea mays]
          Length = 145

 Score =  240 bits (612), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 110/144 (76%), Positives = 128/144 (88%), Gaps = 4/144 (2%)

Query: 227 EREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQ 286
           E EKDYPYTG+DG  CKFDKSKI A+V NFSV+S DE Q++AN +KHGPLA+GINA +MQ
Sbjct: 1   ESEKDYPYTGSDG-KCKFDKSKIVASVQNFSVVSVDEAQISANRIKHGPLAIGINAAYMQ 59

Query: 287 TYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKIC 346
           TYIGGVSCPYICG++LDHGVL+VGYG+SGFAP+R K+KPYWIIKNSWGENWGENGYYKIC
Sbjct: 60  TYIGGVSCPYICGRHLDHGVLLVGYGASGFAPMRLKDKPYWIIKNSWGENWGENGYYKIC 119

Query: 347 MG---RNVCGVDSMVSSVAAIHTT 367
            G   RN CGVDSMVS+V+A+H +
Sbjct: 120 RGSNVRNKCGVDSMVSTVSAVHAS 143


>gi|67773382|gb|AAY81948.1| cysteine protease 11 [Paragonimus westermani]
          Length = 322

 Score =  239 bits (611), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 136/322 (42%), Positives = 188/322 (58%), Gaps = 35/322 (10%)

Query: 48  NAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTP 106
           +A   +  FK  + K YA +++   RF +FK NL RA++ QL D  TA +GVT+FSDLTP
Sbjct: 22  SARELYEQFKRDYGKVYANEDDQK-RFAIFKDNLVRAQKLQLRDQGTARYGVTQFSDLTP 80

Query: 107 SEFRRQFLGLNRRLRLPADAQKAPILPT--NDLPTDFDWRDHGAVTGVKDQGACGSCWSF 164
            EF  ++L       L +D Q   + PT     P   DWR  GAVT V++QG CGSCW+F
Sbjct: 81  EEFAAKYLSP----PLNSD-QVERVQPTGLKAAPERMDWRAKGAVTPVENQGECGSCWAF 135

Query: 165 SATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAG 224
           S  G +EG  F+ TG+LVSLS+QQLVDCD   +         GCNGG  +S++  I+  G
Sbjct: 136 STAGNVEGQWFIKTGQLVSLSKQQLVDCDMAAE---------GCNGGWPSSSYLEIMDMG 186

Query: 225 GVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW 284
           G+E E DYPY G +  +C  +K K+ A + +  V+ + E++    L +HGPL+  +NAV 
Sbjct: 187 GLESENDYPYVGVE-QTCALNKEKLVAKIDDAVVLGASENEHVDYLAEHGPLSTLLNAVA 245

Query: 285 MQTYIGGV------SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWG 338
           +Q Y  G+       CP      L+H VL VGY   G       + PYWIIKNSWG +WG
Sbjct: 246 LQHYQSGILHPSHKDCP---DDDLNHAVLTVGYDREG-------DMPYWIIKNSWGTDWG 295

Query: 339 ENGYYKICMGRNVCGVDSMVSS 360
           E GY+++  G  VCG++ M +S
Sbjct: 296 EKGYFRLFRGDCVCGINRMATS 317


>gi|118394988|ref|XP_001029851.1| Papain family cysteine protease containing protein [Tetrahymena
           thermophila]
 gi|89284124|gb|EAR82188.1| Papain family cysteine protease containing protein [Tetrahymena
           thermophila SB210]
          Length = 330

 Score =  239 bits (611), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 136/317 (42%), Positives = 186/317 (58%), Gaps = 31/317 (9%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           F  F   ++K Y+++E ++ R  +FK NLRR +     D  A HG+T+F+DLT  EF   
Sbjct: 30  FKKFTQTYNKKYSSEEHYNARLSIFKENLRRIELFNKNDE-AQHGITQFADLTHEEFADM 88

Query: 113 FLGLNRRLRLPADAQKAPILPTNDL--PTDFDWRDHGAVTGVKDQGACGSCWSFSATGAL 170
           +LG   +LR   ++Q    L +     PT  DW   GAVT VK+QG+CGSCW+FS TG++
Sbjct: 89  YLGYKPQLR---NSQAKVSLSSTPFTAPTAIDWTTKGAVTPVKNQGSCGSCWAFSTTGSI 145

Query: 171 EGAHFLSTGE-LVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVERE 229
           EG + L   + L S SEQQLVDCD +         D GCNGGLM++AF Y L++  +E E
Sbjct: 146 EGQYVLQLKQNLTSFSEQQLVDCDTK--------EDQGCNGGLMDNAFTY-LESAKLETE 196

Query: 230 KDYPYTGTDGGSCKFDKSKIAAAVSNF------SVISSDEDQMAANLVKHGPLAVGINAV 283
             YPYT  D GSCK+++S     V++F        ++  E+ M   L   GPL+V INA 
Sbjct: 197 SAYPYTAVD-GSCKYNQSLGVVGVASFVDIEQGKTVADTENTMGVALDNIGPLSVAINAN 255

Query: 284 WMQTYIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGY 342
            +Q Y GG+S P IC    L+HGVLIVG GS          K +W +KNSWG +WGE GY
Sbjct: 256 NLQFYAGGISNPLICNPNGLNHGVLIVGLGSE-------NGKDFWKVKNSWGASWGEKGY 308

Query: 343 YKICMGRNVCGVDSMVS 359
           ++I  G+  CG++  VS
Sbjct: 309 FRIVRGKGKCGINRAVS 325


>gi|126338866|ref|XP_001379280.1| PREDICTED: cathepsin F-like [Monodelphis domestica]
          Length = 567

 Score =  239 bits (611), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 137/319 (42%), Positives = 183/319 (57%), Gaps = 34/319 (10%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTPSEFRR 111
           F  F + ++K+YA   E   R  +F  NL  A + Q LD  +A +GVTKFSDLT  EFR 
Sbjct: 270 FKDFLTTYNKSYANATETQRRLGIFARNLELAHKLQELDQGSAQYGVTKFSDLTEEEFRM 329

Query: 112 QFLG-----LNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSA 166
            +L      L  R   PA   + P       P  +DWRDHGA+T  K+QG CGSCW+FS 
Sbjct: 330 FYLNPLLSSLPGRALRPAPRARGPA------PASWDWRDHGALTAAKNQGMCGSCWAFSV 383

Query: 167 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGV 226
           TG +EG  FL  G L++LSEQ+LVDCD         + D  C GGL ++A+  I   GG+
Sbjct: 384 TGNVEGQWFLRRGALLTLSEQELVDCD---------TLDQACGGGLPSNAYTAIETLGGL 434

Query: 227 EREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQ 286
           E EKDY Y G     C F   K  A +++   +S DE ++AA L ++GP+++ +NA  MQ
Sbjct: 435 ETEKDYSYEGRK-ERCSFSPDKARAYINSSVDLSRDEQEIAAWLAENGPVSIALNAFAMQ 493

Query: 287 TYIGGVSCPY--ICGK-YLDHGVLIVGYGS-SGFAPIRFKEKPYWIIKNSWGENWGENGY 342
            Y  GVS P+  +C   ++DH VL+VGYG  SG         P+W IKNSWG +WGE GY
Sbjct: 494 FYRRGVSHPFRPLCSPWFIDHAVLLVGYGDRSGI--------PFWAIKNSWGPDWGEEGY 545

Query: 343 YKICMGRNVCGVDSMVSSV 361
           Y +  G   CG+++M SS 
Sbjct: 546 YYLYRGARACGMNTMASSA 564


>gi|72389847|ref|XP_845218.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
 gi|72389849|ref|XP_845219.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
 gi|72389851|ref|XP_845220.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
 gi|72389857|ref|XP_845223.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
 gi|62359926|gb|AAX80351.1| cysteine peptidase precursor [Trypanosoma brucei]
 gi|62359927|gb|AAX80352.1| cysteine peptidase precursor [Trypanosoma brucei]
 gi|62359928|gb|AAX80353.1| cysteine peptidase precursor [Trypanosoma brucei]
 gi|62359931|gb|AAX80356.1| cysteine peptidase precursor [Trypanosoma brucei]
 gi|70801753|gb|AAZ11659.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
 gi|70801754|gb|AAZ11660.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
 gi|70801755|gb|AAZ11661.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
 gi|70801758|gb|AAZ11664.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
          Length = 450

 Score =  239 bits (611), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 146/373 (39%), Positives = 199/373 (53%), Gaps = 55/373 (14%)

Query: 1   MERLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKF 60
           M R +   ++LL +++ LAS              V       E+ L   E  F+ FK K+
Sbjct: 6   MVRFVRLPVVLLAMAACLAS--------------VALGSLHVEESL---EMRFAAFKKKY 48

Query: 61  SKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ-------F 113
            K Y   +E  +RFR F+ N+ +AK +   +P A  GVT FSD+T  EFR +       F
Sbjct: 49  GKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVTPFSDMTREEFRARYRNGASYF 108

Query: 114 LGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGA 173
               +RLR      K   + T   P   DWR+ GAVT VKDQG CGSCW+FS  G +EG 
Sbjct: 109 AAAQKRLR------KTVNVTTGRAPAAVDWREKGAVTPVKDQGQCGSCWAFSTIGNIEGQ 162

Query: 174 HFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA--GGVEREKD 231
             ++   LVSLSEQ LV CD         + DSGCNGGLM++AF +I+ +  G V  E  
Sbjct: 163 WQVAGNPLVSLSEQMLVSCD---------TIDSGCNGGLMDNAFNWIVNSNGGNVFTEAS 213

Query: 232 YPYTGTDG--GSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYI 289
           YPY   +G    C+ +  +I AA+++   +  DED +AA L ++GPLA+ ++A     Y 
Sbjct: 214 YPYVSGNGEQPQCQMNGHEIGAAITDHVDLPQDEDAIAAYLAENGPLAIAVDATSFMDYN 273

Query: 290 GGV--SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICM 347
           GG+  SC     + LDHGVL+VGY  +          PYWIIKNSW   WGE+GY +I  
Sbjct: 274 GGILTSC---TSEQLDHGVLLVGYNDN-------SNPPYWIIKNSWSNMWGEDGYIRIEK 323

Query: 348 GRNVCGVDSMVSS 360
           G N C ++  VSS
Sbjct: 324 GTNQCLMNQAVSS 336


>gi|72389861|ref|XP_845225.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
 gi|72389863|ref|XP_845226.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
 gi|62359933|gb|AAX80358.1| cysteine peptidase precursor [Trypanosoma brucei]
 gi|62359934|gb|AAX80359.1| cysteine peptidase precursor [Trypanosoma brucei]
 gi|70801760|gb|AAZ11666.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
 gi|70801761|gb|AAZ11667.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
          Length = 449

 Score =  239 bits (611), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 146/373 (39%), Positives = 199/373 (53%), Gaps = 55/373 (14%)

Query: 1   MERLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKF 60
           M R +   ++LL +++ LAS              V       E+ L   E  F+ FK K+
Sbjct: 6   MVRFVRLPVVLLAMAACLAS--------------VALGSLHVEESL---EMRFAAFKKKY 48

Query: 61  SKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ-------F 113
            K Y   +E  +RFR F+ N+ +AK +   +P A  GVT FSD+T  EFR +       F
Sbjct: 49  GKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVTPFSDMTREEFRARYRNGASYF 108

Query: 114 LGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGA 173
               +RLR      K   + T   P   DWR+ GAVT VKDQG CGSCW+FS  G +EG 
Sbjct: 109 AAAQKRLR------KTVNVTTGRAPAAVDWREKGAVTPVKDQGQCGSCWAFSTIGNIEGQ 162

Query: 174 HFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA--GGVEREKD 231
             ++   LVSLSEQ LV CD         + DSGCNGGLM++AF +I+ +  G V  E  
Sbjct: 163 WQVAGNPLVSLSEQMLVSCD---------TIDSGCNGGLMDNAFNWIVNSNGGNVFTEAS 213

Query: 232 YPYTGTDG--GSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYI 289
           YPY   +G    C+ +  +I AA+++   +  DED +AA L ++GPLA+ ++A     Y 
Sbjct: 214 YPYVSGNGEQPQCQMNGHEIGAAITDHVDLPQDEDAIAAYLAENGPLAIAVDATSFMDYN 273

Query: 290 GGV--SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICM 347
           GG+  SC     + LDHGVL+VGY  +          PYWIIKNSW   WGE+GY +I  
Sbjct: 274 GGILTSC---TSEQLDHGVLLVGYNDN-------SNPPYWIIKNSWSNMWGEDGYIRIEK 323

Query: 348 GRNVCGVDSMVSS 360
           G N C ++  VSS
Sbjct: 324 GTNQCLMNQAVSS 336


>gi|72389855|ref|XP_845222.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
 gi|72389865|ref|XP_845227.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
 gi|72389867|ref|XP_845228.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
 gi|62359930|gb|AAX80355.1| cysteine peptidase precursor [Trypanosoma brucei]
 gi|62359935|gb|AAX80360.1| cysteine peptidase precursor [Trypanosoma brucei]
 gi|62359936|gb|AAX80361.1| cysteine peptidase precursor [Trypanosoma brucei]
 gi|70801757|gb|AAZ11663.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
 gi|70801762|gb|AAZ11668.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
 gi|70801763|gb|AAZ11669.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
          Length = 449

 Score =  239 bits (611), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 146/373 (39%), Positives = 199/373 (53%), Gaps = 55/373 (14%)

Query: 1   MERLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKF 60
           M R +   ++LL +++ LAS              V       E+ L   E  F+ FK K+
Sbjct: 6   MVRFVRLPVVLLAMAACLAS--------------VALGSLHVEESL---EMRFAAFKKKY 48

Query: 61  SKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ-------F 113
            K Y   +E  +RFR F+ N+ +AK +   +P A  GVT FSD+T  EFR +       F
Sbjct: 49  GKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVTPFSDMTREEFRARYRNGASYF 108

Query: 114 LGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGA 173
               +RLR      K   + T   P   DWR+ GAVT VKDQG CGSCW+FS  G +EG 
Sbjct: 109 AAAQKRLR------KTVNVTTGRAPAAVDWREKGAVTPVKDQGQCGSCWAFSTIGNIEGQ 162

Query: 174 HFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA--GGVEREKD 231
             ++   LVSLSEQ LV CD         + DSGCNGGLM++AF +I+ +  G V  E  
Sbjct: 163 WQVAGNPLVSLSEQMLVSCD---------TIDSGCNGGLMDNAFNWIVNSNGGNVFTEAS 213

Query: 232 YPYTGTDG--GSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYI 289
           YPY   +G    C+ +  +I AA+++   +  DED +AA L ++GPLA+ ++A     Y 
Sbjct: 214 YPYVSGNGEQPQCQMNGHEIGAAITDHVDLPQDEDAIAAYLAENGPLAIAVDATSFMDYN 273

Query: 290 GGV--SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICM 347
           GG+  SC     + LDHGVL+VGY  +          PYWIIKNSW   WGE+GY +I  
Sbjct: 274 GGILTSC---TSEQLDHGVLLVGYNDN-------SNPPYWIIKNSWSNMWGEDGYIRIEK 323

Query: 348 GRNVCGVDSMVSS 360
           G N C ++  VSS
Sbjct: 324 GTNQCLMNQAVSS 336


>gi|340053963|emb|CCC48256.1| cysteine peptidase precursor [Trypanosoma vivax Y486]
          Length = 452

 Score =  239 bits (611), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 136/319 (42%), Positives = 178/319 (55%), Gaps = 26/319 (8%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEF 109
           E  F+ FK K+ ++Y T  E  +R RVF+ N+RR++     +P A  GVT FSDLTP EF
Sbjct: 31  EPLFAAFKQKYGRSYGTAAEEAFRLRVFEDNMRRSRMYAAANPHATFGVTPFSDLTPEEF 90

Query: 110 RRQFLGLNRRLRLPADAQKAPI-LPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATG 168
           R ++    R         +  + +P    P   DWR  GAVT VKDQG+CGSCWSFSA G
Sbjct: 91  RTRYHNGERHFEAARGRVRTLVQVPPGKAPAAVDWRRKGAVTPVKDQGSCGSCWSFSAIG 150

Query: 169 ALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK--AGGV 226
            +EG    +   L SLSEQ LV CD         S D+GC GG M++AFE+I+K  +G V
Sbjct: 151 NIEGQWAAAGNPLTSLSEQMLVSCD---------SKDNGCGGGFMDNAFEWIVKENSGKV 201

Query: 227 EREKDYPYT--GTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW 284
             EK YPY   G +   CK    ++ A ++    I  DED +A  L  +GP+AV ++A  
Sbjct: 202 YTEKSYPYVSGGGEEPPCKPRGHEVGATITGHVDIPHDEDAIAKYLADNGPVAVAVDATT 261

Query: 285 MQTYIGGV--SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGY 342
             +Y GGV  SC     + L+HGVL+VGY  S        + PYWIIKNSW  +WGE GY
Sbjct: 262 FMSYSGGVVTSC---TSEALNHGVLLVGYNDS-------SKPPYWIIKNSWSSSWGEKGY 311

Query: 343 YKICMGRNVCGVDSMVSSV 361
            +I  G N C V  + SS 
Sbjct: 312 IRIEKGTNQCLVAQLASSA 330


>gi|72389853|ref|XP_845221.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
 gi|62359929|gb|AAX80354.1| cysteine peptidase precursor [Trypanosoma brucei]
 gi|70801756|gb|AAZ11662.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
          Length = 449

 Score =  239 bits (611), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 146/373 (39%), Positives = 199/373 (53%), Gaps = 55/373 (14%)

Query: 1   MERLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKF 60
           M R +   ++LL +++ LAS              V       E+ L   E  F+ FK K+
Sbjct: 6   MVRFVRLPVVLLAIAACLAS--------------VALGSLHVEESL---EMRFAAFKKKY 48

Query: 61  SKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ-------F 113
            K Y   +E  +RFR F+ N+ +AK +   +P A  GVT FSD+T  EFR +       F
Sbjct: 49  GKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVTPFSDMTREEFRARYRNGASYF 108

Query: 114 LGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGA 173
               +RLR      K   + T   P   DWR+ GAVT VKDQG CGSCW+FS  G +EG 
Sbjct: 109 AAAQKRLR------KTVNVTTGRAPAAVDWREKGAVTPVKDQGQCGSCWAFSTIGNIEGQ 162

Query: 174 HFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA--GGVEREKD 231
             ++   LVSLSEQ LV CD         + DSGCNGGLM++AF +I+ +  G V  E  
Sbjct: 163 WQVAGNPLVSLSEQMLVSCD---------TIDSGCNGGLMDNAFNWIVNSNGGNVFTEAS 213

Query: 232 YPYTGTDG--GSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYI 289
           YPY   +G    C+ +  +I AA+++   +  DED +AA L ++GPLA+ ++A     Y 
Sbjct: 214 YPYVSGNGEQPQCQMNGHEIGAAITDHVDLPQDEDAIAAYLAENGPLAIAVDATSFMDYN 273

Query: 290 GGV--SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICM 347
           GG+  SC     + LDHGVL+VGY  +          PYWIIKNSW   WGE+GY +I  
Sbjct: 274 GGILTSC---TSEQLDHGVLLVGYNDN-------SNPPYWIIKNSWSNMWGEDGYIRIEK 323

Query: 348 GRNVCGVDSMVSS 360
           G N C ++  VSS
Sbjct: 324 GTNQCLMNQAVSS 336


>gi|340053966|emb|CCC48259.1| cysteine peptidase precursor, fragment, partial [Trypanosoma vivax
           Y486]
          Length = 447

 Score =  239 bits (609), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 135/319 (42%), Positives = 177/319 (55%), Gaps = 26/319 (8%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEF 109
           E  F+ FK K+ ++Y T  E  +R RVF+ N+RR++     +P A  GVT FSDLTP EF
Sbjct: 23  EPLFAAFKQKYGRSYGTAAEEAFRLRVFEDNMRRSRMYAAANPHATFGVTPFSDLTPEEF 82

Query: 110 RRQFLGLNRRLRLPADAQKAPI-LPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATG 168
           R ++    R         +  + +P    P   DWR  GAVT VKDQG+CGSCWSFSA G
Sbjct: 83  RTRYHNGERHFEAARGRVRTLVQVPPGKAPAAVDWRRKGAVTPVKDQGSCGSCWSFSAIG 142

Query: 169 ALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK--AGGV 226
            +EG    +   L SLSEQ LV CD +         D+GC GG M++AFE+I+K  +G V
Sbjct: 143 NIEGQWAAAGNPLTSLSEQMLVSCDFK---------DNGCGGGFMDNAFEWIVKENSGKV 193

Query: 227 EREKDYPYTGTDGGS--CKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW 284
             EK YPY   DG    C     ++ A ++    I  DED +A  L  +GP+AV ++A  
Sbjct: 194 YTEKSYPYVSEDGSKPFCIPYGHEVGATITGHVDIPHDEDAIAKYLADNGPVAVAVDATT 253

Query: 285 MQTYIGGV--SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGY 342
             +Y GGV  SC     + L+HGVL+VGY  S        + PYWIIKNSW  +WGE GY
Sbjct: 254 FMSYSGGVVTSC---TSEALNHGVLLVGYNDS-------SKPPYWIIKNSWSSSWGEKGY 303

Query: 343 YKICMGRNVCGVDSMVSSV 361
            +I  G N C V  + SS 
Sbjct: 304 IRIEKGTNQCLVAQLASSA 322


>gi|391336140|ref|XP_003742440.1| PREDICTED: cathepsin L-like [Metaseiulus occidentalis]
          Length = 330

 Score =  239 bits (609), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 136/320 (42%), Positives = 188/320 (58%), Gaps = 24/320 (7%)

Query: 48  NAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH---GVTKFSDL 104
           +AE H++ FKS   K+Y   +E   R  +F+ NL   +    ++ +      GV +F+D+
Sbjct: 23  SAEPHWNAFKSTHLKSYRDGQEELIRRFIFEDNLHTIEEFNRVNASLAGFTLGVNEFADM 82

Query: 105 TPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSF 164
           T +EF    LGL  R ++  D+         DLP + DW   G VT VK+QG CGSCW+F
Sbjct: 83  TNTEFSNMLLGLGGRNKIAGDSVFESS-HVQDLPAEVDWTQKGYVTEVKNQGQCGSCWAF 141

Query: 165 SATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAG 224
           S TG+LEG  F  TG+LVSLSEQ LVDC        +   + GCNGGLM+ AF YI K G
Sbjct: 142 STTGSLEGQVFKKTGKLVSLSEQNLVDCS-------TSEGNQGCNGGLMDQAFTYIKKNG 194

Query: 225 GVEREKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVGINA- 282
           G++ E  YPYTG+D G+C+F ++K+ A VS F  V S DE+ +   +   GP++V I+A 
Sbjct: 195 GIDTEAAYPYTGSD-GTCRFLENKVGATVSGFVDVKSGDENALKEAVATVGPISVAIDAS 253

Query: 283 -VWMQTYIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGEN 340
            ++ Q Y GGV  P+ C    LDHGVL+VGYG+ G        K YW++KNSWG +WG  
Sbjct: 254 SIFFQFYRGGVYNPWFCSSTELDHGVLVVGYGTEG-------GKDYWLVKNSWGSSWGLK 306

Query: 341 GYYKICMG-RNVCGVDSMVS 359
           GY K+    +N CG+ +  S
Sbjct: 307 GYIKMVRNKKNRCGIATQAS 326


>gi|393906608|gb|EFO21301.2| ctsf protein [Loa loa]
          Length = 472

 Score =  238 bits (607), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 132/320 (41%), Positives = 188/320 (58%), Gaps = 33/320 (10%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTPSEFRR 111
           F  F  KF + Y++  E   RF+ +  NL   ++ Q  +  TA++GVT+FSD++P EF++
Sbjct: 170 FLDFIKKFKREYSSVAEQLDRFKKYMQNLHFVEKLQHEEKGTAIYGVTQFSDMSPEEFQK 229

Query: 112 QFLGLNRRLRLPADAQKAPI----LPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSAT 167
             L      R+ ++  +  +    L  N+LP  FDWR  G VT VK+QG+CGSCW+FS T
Sbjct: 230 TMLPSLWWDRVVSNGVEYDLKKFNLTFNNLPEQFDWRTKGVVTPVKNQGSCGSCWAFSVT 289

Query: 168 GALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVE 227
           G +EG   + TG+L+SLSEQ+L+DCD           D GCNGGL  +AF  I + GG+E
Sbjct: 290 GNIEGLWAIKTGKLISLSEQELIDCDR---------IDKGCNGGLPINAFREIQRMGGLE 340

Query: 228 REKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQT 287
            E  YPY   + G+C   +S IA  + +   I  +E  M A +V+ GPL+VGI+A  +  
Sbjct: 341 PEDQYPYKARN-GTCHLIRSAIAVTIDDAVEIPRNETVMKAWIVQRGPLSVGIDAKLLAY 399

Query: 288 YIGGV------SCPYICGKYLDHGVLIVGYG-SSGFAPIRFKEKPYWIIKNSWGENWGEN 340
           Y  G+       CP      +DHGVLI GYG  +G         PYW IKNSWG+ WGE+
Sbjct: 400 YKSGILHPSRSRCP---PSGIDHGVLITGYGVENGL--------PYWTIKNSWGDQWGED 448

Query: 341 GYYKICMGRNVCGVDSMVSS 360
           GY+++ +G++VCGV  +VSS
Sbjct: 449 GYFRLMLGKDVCGVSDLVSS 468


>gi|443696723|gb|ELT97360.1| hypothetical protein CAPTEDRAFT_147978 [Capitella teleta]
          Length = 274

 Score =  238 bits (607), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 131/287 (45%), Positives = 177/287 (61%), Gaps = 21/287 (7%)

Query: 82  RRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDF 141
           RR + ++  D  A +G + F+DLT  EFR+ +L     +      + A I P    P  F
Sbjct: 5   RRIQEKEQGD--ATYGASPFADLTAEEFRKNYLSPVWNVTHDPFLKPASI-PIETPPDAF 61

Query: 142 DWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEES 201
           DWRDH AVT VK+QG+CGSCW+FS TG +EG   +   +L+SLSEQ+LVDCD        
Sbjct: 62  DWRDHDAVTPVKNQGSCGSCWAFSVTGNVEGQWAIQKKKLLSLSEQELVDCDK------- 114

Query: 202 GSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISS 261
              D GCNGGL   A++ I++ GG+E EKDYPY G  G  C F+K+++   ++    ISS
Sbjct: 115 --VDLGCNGGLPLQAYKEIMRIGGLETEKDYPYEGK-GDKCVFEKAEVEVNITGAVNISS 171

Query: 262 DEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCP--YICG-KYLDHGVLIVGYG-SSGFA 317
           +ED M A L K+GP+++G+NA  MQ Y+GGVS P  ++C    LDHGVLI GYG   G+ 
Sbjct: 172 NEDDMKAWLWKNGPISIGLNANAMQFYMGGVSHPFSFLCSPSSLDHGVLITGYGIKQGW- 230

Query: 318 PIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAI 364
                + P+W IKNSWGE+WGE GYY +  G  VCGV+ M +S   +
Sbjct: 231 ---MSDSPFWAIKNSWGESWGEKGYYLLYRGAGVCGVNQMPTSATVV 274


>gi|312080834|ref|XP_003142769.1| ctsf protein [Loa loa]
          Length = 437

 Score =  238 bits (606), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 132/320 (41%), Positives = 188/320 (58%), Gaps = 33/320 (10%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTPSEFRR 111
           F  F  KF + Y++  E   RF+ +  NL   ++ Q  +  TA++GVT+FSD++P EF++
Sbjct: 135 FLDFIKKFKREYSSVAEQLDRFKKYMQNLHFVEKLQHEEKGTAIYGVTQFSDMSPEEFQK 194

Query: 112 QFLGLNRRLRLPADAQKAPI----LPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSAT 167
             L      R+ ++  +  +    L  N+LP  FDWR  G VT VK+QG+CGSCW+FS T
Sbjct: 195 TMLPSLWWDRVVSNGVEYDLKKFNLTFNNLPEQFDWRTKGVVTPVKNQGSCGSCWAFSVT 254

Query: 168 GALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVE 227
           G +EG   + TG+L+SLSEQ+L+DCD           D GCNGGL  +AF  I + GG+E
Sbjct: 255 GNIEGLWAIKTGKLISLSEQELIDCDR---------IDKGCNGGLPINAFREIQRMGGLE 305

Query: 228 REKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQT 287
            E  YPY   + G+C   +S IA  + +   I  +E  M A +V+ GPL+VGI+A  +  
Sbjct: 306 PEDQYPYKARN-GTCHLIRSAIAVTIDDAVEIPRNETVMKAWIVQRGPLSVGIDAKLLAY 364

Query: 288 YIGGV------SCPYICGKYLDHGVLIVGYG-SSGFAPIRFKEKPYWIIKNSWGENWGEN 340
           Y  G+       CP      +DHGVLI GYG  +G         PYW IKNSWG+ WGE+
Sbjct: 365 YKSGILHPSRSRCP---PSGIDHGVLITGYGVENGL--------PYWTIKNSWGDQWGED 413

Query: 341 GYYKICMGRNVCGVDSMVSS 360
           GY+++ +G++VCGV  +VSS
Sbjct: 414 GYFRLMLGKDVCGVSDLVSS 433


>gi|343417244|emb|CCD20093.1| cysteine peptidase precursor [Trypanosoma vivax Y486]
          Length = 454

 Score =  237 bits (605), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 136/319 (42%), Positives = 176/319 (55%), Gaps = 26/319 (8%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEF 109
           E  F+ FK K+ ++Y T  E  +R RVF+ N+RR++     +P A  GVT FSDLTP EF
Sbjct: 31  EPLFAAFKQKYGRSYGTAAEEAFRLRVFEDNMRRSRMYAAANPHATFGVTPFSDLTPEEF 90

Query: 110 RRQFLGLNRRLRLPADAQKAPI-LPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATG 168
           R ++    R         +  + +P    P   DW   GAVT VKDQG CGSCWSFSA G
Sbjct: 91  RTRYHNGERHFEAARGRVRTLVQVPPGKAPAAVDWGRKGAVTPVKDQGTCGSCWSFSAIG 150

Query: 169 ALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK--AGGV 226
            +EG    +   L SLSEQ LV CD +         D+GC GGLM++AFE+I+K  +G V
Sbjct: 151 NIEGQWAAAGNPLTSLSEQMLVSCDTK---------DNGCGGGLMDNAFEWIVKENSGKV 201

Query: 227 EREKDYPYT--GTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW 284
             EK YPY   G +   CK    K+ A ++    I  DED +A  L  +GP+AV ++A  
Sbjct: 202 YTEKSYPYVSGGGEEPPCKPRGHKVGATITGHVDIPHDEDAIAKYLADNGPVAVAVDATT 261

Query: 285 MQTYIGGV--SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGY 342
             +Y GGV  SC     + L+HGVL+VGY  S        + PYWIIKNSW  +WGE GY
Sbjct: 262 FMSYSGGVVTSC---TSEALNHGVLLVGYNDS-------SKPPYWIIKNSWSSSWGEKGY 311

Query: 343 YKICMGRNVCGVDSMVSSV 361
            +I  G N C V    SS 
Sbjct: 312 IRIEKGTNQCLVAQRASSA 330


>gi|375073982|gb|AFA34858.1| cathepsin L-like protein [Trypanosoma dionisii]
          Length = 467

 Score =  237 bits (604), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 139/321 (43%), Positives = 175/321 (54%), Gaps = 34/321 (10%)

Query: 52  HFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRR 111
            F+ FK ++ + Y +  E  +R  VF+ NL  AK     +P A  GVT FSDLT  EFR 
Sbjct: 37  QFADFKQRYGRVYKSAAEEAFRLSVFRKNLLDAKLHAAANPHATFGVTPFSDLTREEFRS 96

Query: 112 Q-------FLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSF 164
           +       F    +R R+P D      +   D P   DWRD GAVT VKDQG CGSCW+F
Sbjct: 97  RHHSGAAHFAAGRKRARVPVD------VGVGDAPAAVDWRDRGAVTPVKDQGQCGSCWAF 150

Query: 165 SATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK-- 222
           SA G +EG  FL+   L SLSEQ LV CD         + DSGC+GGLMNSAFE+I++  
Sbjct: 151 SAIGNVEGQWFLAGNALTSLSEQMLVSCD---------TMDSGCDGGLMNSAFEWIVEHH 201

Query: 223 AGGVEREKDYPYTGTDG--GSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGI 280
            G V  E+ Y Y   DG    C+     + A ++    +  DE +MA  L  +GPLAV +
Sbjct: 202 NGTVYTEESYRYASGDGIAQPCRTSGRTVGAVITGHVKLPPDEAKMATWLAANGPLAVAV 261

Query: 281 NAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGEN 340
           +A     Y GGV    +  + LDHGVL+VGY  S  AP      PYWI+KNSWG  WGE+
Sbjct: 262 DASSWMFYTGGVLTSCVSNE-LDHGVLLVGYNDSA-AP------PYWIVKNSWGTLWGED 313

Query: 341 GYYKICMGRNVCGVDSMVSSV 361
           GY +I  G N C V    SS 
Sbjct: 314 GYVRIAKGTNQCLVKEEASSA 334


>gi|440804656|gb|ELR25533.1| cysteine proteinase precursor, putative [Acanthamoeba castellanii
           str. Neff]
          Length = 330

 Score =  237 bits (604), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 135/321 (42%), Positives = 186/321 (57%), Gaps = 18/321 (5%)

Query: 42  SEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKF 101
           +E   + AE  F  F +++ K+YA+ EE   R R+F+ NL R       +  A +GV KF
Sbjct: 21  AEAGTMTAEQQFRQFAAQYGKSYAS-EEFGERLRIFRDNLDRIDALNSANTGARYGVNKF 79

Query: 102 SDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSC 161
           +DLTP EF+  +L   R       A  A +  T  LP+ FDWRD GAVT  KDQG CG  
Sbjct: 80  ADLTPKEFKATYLKGARSAGQKKAAATAKLDMTGPLPSQFDWRDKGAVTPTKDQGQCG-- 137

Query: 162 WSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYIL 221
           W+FS T A+E   FLS  +LVSL+ QQ+VDCD        G+ D GC+GG   +A+EY++
Sbjct: 138 WAFSVTEAIESQWFLSGRKLVSLAPQQIVDCDQ-------GNGDYGCDGGDPPTAYEYVI 190

Query: 222 KAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISS--DEDQMAANLVKHGPLAVG 279
           KAGG++ E+ YPYT  D G C F  S + A +SN++ I++  +E +M   L   GPL++ 
Sbjct: 191 KAGGLDTEESYPYTAED-GQCAFKPSAVGAKISNWTYITTTKNETEMQYGLASRGPLSIC 249

Query: 280 INAVWMQTYIGGVSCPYICGKYLDHGVLIVGYG-SSGFAPIRFKEKPYWIIKNSWGENWG 338
           ++A   Q YIGGV    +C   LDH V+I GY    G+    F +   W I+NSWGE+WG
Sbjct: 250 VDASSWQYYIGGVITS-LCEDSLDHCVMITGYSVQEGW---DFMKYDVWNIRNSWGEDWG 305

Query: 339 ENGYYKICMGRNVCGVDSMVS 359
             GY  +  G N+CGV   V+
Sbjct: 306 YGGYLYVQRGSNLCGVGDEVT 326


>gi|67773376|gb|AAY81945.1| cysteine protease 7 [Paragonimus westermani]
          Length = 325

 Score =  237 bits (604), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 132/322 (40%), Positives = 186/322 (57%), Gaps = 27/322 (8%)

Query: 48  NAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTP 106
           NA   +  FK  + K YA +++   RF +FK NL RA++ Q+ +  TA +GVT+FSDLTP
Sbjct: 27  NARELYEQFKRDYGKAYANEDDQK-RFAIFKDNLVRAQQYQMQEQGTAKYGVTQFSDLTP 85

Query: 107 SEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSA 166
            EF   +LG     R+     +  +      P   DWR  GAV  V+DQG+CGSCW+FS 
Sbjct: 86  EEFAAMYLGS----RIDERVDRVQLNDLQTAPASVDWRKKGAVGPVEDQGSCGSCWAFSV 141

Query: 167 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGV 226
           T  +EG  FL TG LVSLS+QQLVDCD           D GC+GG     ++ I + GG+
Sbjct: 142 TANVEGQWFLKTGRLVSLSKQQLVDCDR---------LDHGCSGGYPPYTYKEIKRMGGL 192

Query: 227 EREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQ 286
           E +  YPYT     +C+ D+SK+ A + +  V+ +DE++ AA L +HGP++  +NA  +Q
Sbjct: 193 ELQSAYPYTSWK-QACRIDRSKLVAKIDDSIVLETDEEKQAAWLAEHGPMSTCLNAGPLQ 251

Query: 287 TYIGGVSCP--YICG-KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYY 343
            Y  G+  P   +C  + L+H VL VGY +           PYW ++NSWG  WGENGY+
Sbjct: 252 FYQSGILHPSKAMCSPEGLNHAVLTVGYDTEHGV-------PYWTVRNSWGTRWGENGYF 304

Query: 344 KICMGRNVCGVDSMVSSVAAIH 365
           +I  G   CG+D + +S A IH
Sbjct: 305 RIYRGDGTCGIDRLTTS-AIIH 325


>gi|118156|sp|P14658.1|CYSP_TRYBB RecName: Full=Cysteine proteinase; Flags: Precursor
 gi|10393|emb|CAA34485.1| unnamed protein product [Trypanosoma brucei]
          Length = 450

 Score =  236 bits (603), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 146/373 (39%), Positives = 198/373 (53%), Gaps = 55/373 (14%)

Query: 1   MERLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKF 60
           M R +   ++LL +++ LAS              V       E+ L   E  F+ FK K+
Sbjct: 6   MVRFVRLPVVLLAMAACLAS--------------VALGSLHVEESL---EMRFAAFKKKY 48

Query: 61  SKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ-------F 113
            K Y   +E  +RFR F+ N+ +AK +   +P A  GVT FSD+T  EFR +       F
Sbjct: 49  GKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVTPFSDMTREEFRARYRNGASYF 108

Query: 114 LGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGA 173
               +RLR      K   + T   P   DWR+ GAVT VK QG CGSCW+FS  G +EG 
Sbjct: 109 AAAQKRLR------KTVNVTTGRAPAAVDWREKGAVTPVKVQGQCGSCWAFSTIGNIEGQ 162

Query: 174 HFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA--GGVEREKD 231
             ++   LVSLSEQ LV CD         + DSGCNGGLM++AF +I+ +  G V  E  
Sbjct: 163 WQVAGNPLVSLSEQMLVSCD---------TIDSGCNGGLMDNAFNWIVNSNGGNVFTEAS 213

Query: 232 YPYTGTDG--GSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYI 289
           YPY   +G    C+ +  +I AA+++   +  DED +AA L ++GPLA+ ++A     Y 
Sbjct: 214 YPYVSGNGEQPQCQMNGHEIGAAITDHVDLPQDEDAIAAYLAENGPLAIAVDAESFMDYN 273

Query: 290 GGV--SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICM 347
           GG+  SC     K LDHGVL+VGY  +          PYWIIKNSW   WGE+GY +I  
Sbjct: 274 GGILTSC---TSKQLDHGVLLVGYNDN-------SNPPYWIIKNSWSNMWGEDGYIRIEK 323

Query: 348 GRNVCGVDSMVSS 360
           G N C ++  VSS
Sbjct: 324 GTNQCLMNQAVSS 336


>gi|67773370|gb|AAY81942.1| cysteine protease 3 [Paragonimus westermani]
          Length = 321

 Score =  236 bits (602), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 135/324 (41%), Positives = 183/324 (56%), Gaps = 30/324 (9%)

Query: 48  NAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTP 106
           +A   +  FK  + K YA +++   RF +FK NL RA++ QL D  TA +GVT+FSDLTP
Sbjct: 22  SARELYEQFKRDYGKVYANEDDQK-RFAIFKDNLMRAQKLQLKDQGTARYGVTQFSDLTP 80

Query: 107 SEFRRQFLGLNRRLRLPADAQKAPILPT--NDLPTDFDWRDHGAVTGVKDQGACGSCWSF 164
            EF  ++L          + Q   + PT     P   DWR  GAVT V++QG+CGSCW+F
Sbjct: 81  EEFAAKYLSAPVN-----NDQVKRVRPTGLKAAPERIDWRAKGAVTAVENQGSCGSCWAF 135

Query: 165 SATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAG 224
           S  G +EG  F+ TG+LVSLS+QQLVDCD   D         GCNGG   S++  I+  G
Sbjct: 136 STAGNVEGQWFIKTGQLVSLSKQQLVDCDRAAD---------GCNGGWPASSYLEIMHMG 186

Query: 225 GVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW 284
           G+E + DYPY G     C  +K ++ A + +   +   ED  AA L +HGPL+  +NA+ 
Sbjct: 187 GLESQDDYPYAGVK-EQCFMEKERLLAKIDDSIALGPSEDDNAAYLAEHGPLSTLLNAIT 245

Query: 285 MQTYIGGVSCPYI--CGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENG 341
           +Q Y  G+  P    C    L+H VL VGY   G       + PYWIIKNSW   WGE G
Sbjct: 246 LQYYQSGIIHPSYEECSPVDLNHAVLTVGYDKEG-------DMPYWIIKNSWNVEWGEKG 298

Query: 342 YYKICMGRNVCGVDSMVSSVAAIH 365
           Y+++  G   CG++ M +S A IH
Sbjct: 299 YFRLYRGDGTCGINRMPTS-AIIH 321


>gi|343476707|emb|CCD12272.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 447

 Score =  236 bits (601), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 131/321 (40%), Positives = 178/321 (55%), Gaps = 23/321 (7%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEF 109
           +  F+ FK K+S++Y    E  +RFRVFK N+ RAK     +P A  GVT+FSD++P EF
Sbjct: 38  QQQFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSPEEF 97

Query: 110 RRQFL-GLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATG 168
           R  +  G           +K   + T   P   DWR  GAVT VKDQG CGSCW+FSA G
Sbjct: 98  RATYHNGAEYYAAALKRPRKVVTVSTGKAPEAVDWRKKGAVTPVKDQGQCGSCWAFSAIG 157

Query: 169 ALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAG--GV 226
            +EG   ++   L SLSEQ LV CD E         D GC GGLM++AF++I+ +    V
Sbjct: 158 NIEGQWKVTGHNLTSLSEQMLVSCDTE---------DLGCAGGLMDNAFKWIVSSNRHNV 208

Query: 227 EREKDYPYTGTDGG--SCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW 284
             E+ YPY    G    C+     + A + +   +  DE+ +A  L K+GP+A+ +++  
Sbjct: 209 FTEESYPYASKGGNVPPCRMSGKVVGAKIRDHVDLPKDENAIAEWLAKNGPVAIAVDSTS 268

Query: 285 MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYK 344
            Q+Y GGV    I  K LDHGVL+VGY  +        + PYWIIKNSW + WGE GY +
Sbjct: 269 FQSYTGGVLTSCI-SKQLDHGVLLVGYDDT-------SKPPYWIIKNSWSKGWGEEGYIR 320

Query: 345 ICMGRNVCGVDSMVSSVAAIH 365
           I  G N C V +  +S A +H
Sbjct: 321 IEKGTNQCLVKNYATS-AVVH 340


>gi|343477445|emb|CCD11724.1| unnamed protein product, partial [Trypanosoma congolense IL3000]
          Length = 380

 Score =  236 bits (601), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 132/316 (41%), Positives = 179/316 (56%), Gaps = 22/316 (6%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEF 109
           +  F+ FK K+S++Y    E  +RFRVFK N+ RAK     +P A  GVT+FSD++P EF
Sbjct: 38  QQQFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSPEEF 97

Query: 110 RRQFL-GLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATG 168
           R  +  G           +K   + T   P   DWR  GAVT VKDQG CGSCW+FSA G
Sbjct: 98  RATYHNGAEYYAAALKRPRKVVNVSTGKAPEAVDWRKKGAVTPVKDQGQCGSCWAFSAIG 157

Query: 169 ALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA--GGV 226
            +EG   ++  EL SLSEQ LV CD         + D GC GGLM+ AF++I+ +  G V
Sbjct: 158 NIEGQWKVAGHELTSLSEQMLVSCD---------TNDFGCEGGLMDDAFKWIVSSNKGNV 208

Query: 227 EREKDYPYTGTDGGSCKFDKSK--IAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW 284
             E+ YPY    G     DKS   + A + +   +  DE+ +A  L K+GP+A+ ++A  
Sbjct: 209 FTEQSYPYASGGGNVPACDKSGKVVGAKIRDHVDLPEDENAIAEWLAKNGPVAIAVDATS 268

Query: 285 MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYK 344
            Q+Y GGV    I  ++LDHGVL+VGY  +        + PYWIIKNSW + WGE GY +
Sbjct: 269 FQSYTGGVLTSCI-SEHLDHGVLLVGYDDT-------SKPPYWIIKNSWSKGWGEEGYIR 320

Query: 345 ICMGRNVCGVDSMVSS 360
           I  G N C + ++ SS
Sbjct: 321 IEKGTNQCLMKNLPSS 336


>gi|15485586|emb|CAC67416.1| cysteine protease [Trypanosoma brucei rhodesiense]
          Length = 450

 Score =  236 bits (601), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 145/373 (38%), Positives = 197/373 (52%), Gaps = 55/373 (14%)

Query: 1   MERLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKF 60
           M R +   ++LL +++ LAS              V       E+ L   E  F+ FK K+
Sbjct: 6   MVRFVRLPVVLLAMAACLAS--------------VALGSLHVEESL---EMRFAAFKKKY 48

Query: 61  SKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ-------F 113
            K Y   +E  +RFR F+ N+ +AK +   +P A  GVT FSD+T  EFR +       F
Sbjct: 49  GKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVTPFSDMTREEFRARYRNGASYF 108

Query: 114 LGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGA 173
               +RLR      K   + T   P   DWR+ GAVT VKDQG CGSCW+FS  G +EG 
Sbjct: 109 AAAQKRLR------KTVNVTTGRAPAAVDWREKGAVTPVKDQGQCGSCWAFSTIGNIEGQ 162

Query: 174 HFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA--GGVEREKD 231
             ++   LVSLSEQ LV CD         + D GC GGLM++AF +I+ +  G V  E  
Sbjct: 163 WQVAGNPLVSLSEQMLVSCD---------TIDFGCGGGLMDNAFNWIVNSNGGNVFTEAS 213

Query: 232 YPYTGTDG--GSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYI 289
           YPY   +G    C+ +  +I AA+++   +  DED +AA L ++GPLA+ ++A     Y 
Sbjct: 214 YPYVSGNGEQPQCQMNGHEIGAAITDHVDLPQDEDAIAAYLAENGPLAIAVDATSFMDYN 273

Query: 290 GGV--SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICM 347
           GG+  SC     + LDHGVL+VGY  S          PYWIIKNSW   WGE+GY +I  
Sbjct: 274 GGILTSC---TSEQLDHGVLLVGYNDS-------SNPPYWIIKNSWSNMWGEDGYIRIEK 323

Query: 348 GRNVCGVDSMVSS 360
           G N C ++  VSS
Sbjct: 324 GTNQCLMNQAVSS 336


>gi|118395092|ref|XP_001029901.1| Papain family cysteine protease containing protein [Tetrahymena
           thermophila]
 gi|89284178|gb|EAR82238.1| Papain family cysteine protease containing protein [Tetrahymena
           thermophila SB210]
          Length = 344

 Score =  235 bits (599), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 121/321 (37%), Positives = 175/321 (54%), Gaps = 30/321 (9%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           F  FKSKF+K Y  + EH   F  +K +     + Q+ +P A  G TKFSD++P EF  +
Sbjct: 33  FEEFKSKFNKYYHNEHEHHSSFHNYKTSREHIVKHQMENPNAKFGHTKFSDMSPEEFENK 92

Query: 113 FLGLNRRL---------RLPADAQKAPI-----LPTNDLPTDFDWRDHGAVTGVKDQGAC 158
            L  +  L         +L A+  K  +     +  +DLP  FDWRD G +T  K Q  C
Sbjct: 93  MLNFDFSLFKKAKSQGIKLKAEPMKGYLRQGENVDNSDLPESFDWRDKGIITPAKFQNTC 152

Query: 159 GSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFE 218
           GSCW+F+ TG +E  + L  GEL+  SEQ L+DCD         + + GC GGLM  A++
Sbjct: 153 GSCWTFATTGVIESQYALKYGELLHFSEQMLLDCD---------NINQGCRGGLMTDAYQ 203

Query: 219 YILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAV 278
           ++ ++GG++    Y         C FDK+K+ A V ++  I  +E+ +   LVK+GP+AV
Sbjct: 204 FLQQSGGIQTADTYGDYKNKKDICNFDKAKVKAKVVDWYQIPENEETIRRELVKNGPVAV 263

Query: 279 GINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWG 338
           GINA  +Q Y GG+  P  C   ++H VLIVGYG         +  PYW+IKN WG  WG
Sbjct: 264 GINARTLQFYEGGIVDPKNCDDKINHAVLIVGYGVE-------EGIPYWLIKNQWGAEWG 316

Query: 339 ENGYYKICMGRNVCGVDSMVS 359
             G++K+  G+  CG+ +  S
Sbjct: 317 IKGFFKLIRGKKQCGIHTYAS 337


>gi|340053971|emb|CCC48265.1| cysteine peptidase precursor, fragment, partial [Trypanosoma vivax
           Y486]
          Length = 389

 Score =  235 bits (599), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 134/318 (42%), Positives = 175/318 (55%), Gaps = 26/318 (8%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEF 109
           E  F+ FK K+ ++Y T  E  +R RVF+ N+RR++     +P A  GVT FSDLTP EF
Sbjct: 31  EPLFAAFKQKYGRSYGTAAEEAFRLRVFEDNMRRSRMYAAANPHATFGVTPFSDLTPEEF 90

Query: 110 RRQFLGLNRRLRLPADAQKAPI-LPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATG 168
           R ++    R         +  + +P    P   DWR  GAVT VKDQG CGSCWSFSA G
Sbjct: 91  RTRYHNGERHFEAARGRVRTLVQVPPGKAPAAVDWRRKGAVTPVKDQGTCGSCWSFSAIG 150

Query: 169 ALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK--AGGV 226
            +EG    +   L SLSEQ LV CD +         D+GC GG M++AFE+I+K  +G V
Sbjct: 151 NIEGQWAAAGNPLTSLSEQMLVSCDFK---------DNGCGGGFMDNAFEWIVKENSGKV 201

Query: 227 EREKDYPYTGTDGGS--CKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW 284
              K YPY   DG    C     ++ A ++    I  DED +A  L  +GP+AV ++A  
Sbjct: 202 YTGKSYPYVSEDGSKPFCIPYGHEVGATITGHVDIPHDEDAIAKYLADNGPVAVAVDATT 261

Query: 285 MQTYIGGV--SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGY 342
             +Y GGV  SC     + L+HGVL+VGY  S        + PYWIIKNSW  +WGE GY
Sbjct: 262 FMSYSGGVVTSC---TSEALNHGVLLVGYNDS-------SKPPYWIIKNSWSSSWGEKGY 311

Query: 343 YKICMGRNVCGVDSMVSS 360
            +I  G N C V  + SS
Sbjct: 312 IRIEKGTNQCLVAQLASS 329


>gi|72389859|ref|XP_845224.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
 gi|62359932|gb|AAX80357.1| cysteine peptidase precursor [Trypanosoma brucei]
 gi|70801759|gb|AAZ11665.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
          Length = 450

 Score =  234 bits (598), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 144/373 (38%), Positives = 197/373 (52%), Gaps = 55/373 (14%)

Query: 1   MERLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKF 60
           M R +   ++LL +++ LAS              V       E+ L   E  F+ FK K+
Sbjct: 6   MVRFVRLPVVLLAMAACLAS--------------VALGSLHVEESL---EMRFAAFKKKY 48

Query: 61  SKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ-------F 113
            K Y   +E  +RFR F+ N+ +AK +   +P A  GVT FSD+T  EFR +       F
Sbjct: 49  GKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVTPFSDMTREEFRARYRNGASYF 108

Query: 114 LGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGA 173
               +RLR      K   + T   P   DWR+ GAVT VKDQG CGSCW+FS  G +EG 
Sbjct: 109 AAAQKRLR------KTVNVTTGRAPAAVDWREKGAVTPVKDQGQCGSCWAFSTIGNIEGQ 162

Query: 174 HFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA--GGVEREKD 231
             ++   LVSLSEQ LV CD         + D GC GGLM++AF +I+ +  G V  E  
Sbjct: 163 WQVAGNPLVSLSEQMLVSCD---------TIDFGCGGGLMDNAFNWIVNSNGGNVFTEAS 213

Query: 232 YPYTGTDG--GSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYI 289
           YPY   +G    C+ +  +I AA+++   +  DED +AA L ++GPLA+ ++A     Y 
Sbjct: 214 YPYVSGNGEQPQCQMNGHEIGAAITDHVDLPQDEDAIAAYLAENGPLAIAVDATSFMDYN 273

Query: 290 GGV--SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICM 347
           GG+  SC     + LDHGVL+VGY  +          PYWIIKNSW   WGE+GY +I  
Sbjct: 274 GGILTSC---TSEQLDHGVLLVGYNDN-------SNPPYWIIKNSWSNMWGEDGYIRIEK 323

Query: 348 GRNVCGVDSMVSS 360
           G N C ++  VSS
Sbjct: 324 GTNQCLMNQAVSS 336


>gi|261328617|emb|CBH11595.1| cysteine peptidase precursor [Trypanosoma brucei gambiense DAL972]
 gi|261328620|emb|CBH11598.1| cysteine peptidase precursor [Trypanosoma brucei gambiense DAL972]
          Length = 450

 Score =  234 bits (597), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 144/373 (38%), Positives = 197/373 (52%), Gaps = 55/373 (14%)

Query: 1   MERLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKF 60
           M R +   ++LL +++ LAS              V       E+ L   E  F+ FK K+
Sbjct: 6   MVRFVRLPVVLLAMAACLAS--------------VALGSLHVEESL---EMRFAAFKKKY 48

Query: 61  SKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ-------F 113
            K Y   +E  +RFR F+ N+ +AK +   +P A  GVT FSD+T  EFR +       F
Sbjct: 49  GKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVTPFSDMTREEFRARYRNGASYF 108

Query: 114 LGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGA 173
               +RLR      K   + T   P   DWR+ GAVT VKDQG CGSCW+FS  G +EG 
Sbjct: 109 AAAQKRLR------KTVNVTTGRAPAAVDWREKGAVTPVKDQGQCGSCWAFSTIGNIEGQ 162

Query: 174 HFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA--GGVEREKD 231
             ++   LVSLSEQ LV CD         + D GC GGLM++AF +I+ +  G V  E  
Sbjct: 163 WQVAGNPLVSLSEQMLVSCD---------TIDFGCGGGLMDNAFNWIVNSNGGNVFTEAS 213

Query: 232 YPYTGTDG--GSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYI 289
           YPY   +G    C+ +  +I AA+++   +  DED +AA L ++GPLA+ ++A     Y 
Sbjct: 214 YPYVSGNGEQPQCQMNGHEIGAAITDHVDLPQDEDAIAAYLAENGPLAIAVDATSFMDYN 273

Query: 290 GGV--SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICM 347
           GG+  SC     + LDHGVL+VGY  +          PYWIIKNSW   WGE+GY +I  
Sbjct: 274 GGILTSC---TSEQLDHGVLLVGYNDN-------SNPPYWIIKNSWSNMWGEDGYIRIEK 323

Query: 348 GRNVCGVDSMVSS 360
           G N C ++  VSS
Sbjct: 324 GTNQCLMNQAVSS 336


>gi|261328615|emb|CBH11593.1| cysteine peptidase precursor [Trypanosoma brucei gambiense DAL972]
          Length = 451

 Score =  234 bits (597), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 144/373 (38%), Positives = 197/373 (52%), Gaps = 55/373 (14%)

Query: 1   MERLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKF 60
           M R +   ++LL +++ LAS              V       E+ L   E  F+ FK K+
Sbjct: 6   MVRFVRLPVVLLAMAACLAS--------------VALGSLHVEESL---EMRFAAFKKKY 48

Query: 61  SKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ-------F 113
            K Y   +E  +RFR F+ N+ +AK +   +P A  GVT FSD+T  EFR +       F
Sbjct: 49  GKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVTPFSDMTREEFRARYRNGASYF 108

Query: 114 LGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGA 173
               +RLR      K   + T   P   DWR+ GAVT VKDQG CGSCW+FS  G +EG 
Sbjct: 109 AAAQKRLR------KTVNVTTGRAPAAVDWREKGAVTPVKDQGQCGSCWAFSTIGNIEGQ 162

Query: 174 HFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA--GGVEREKD 231
             ++   LVSLSEQ LV CD         + D GC GGLM++AF +I+ +  G V  E  
Sbjct: 163 WQVAGNPLVSLSEQMLVSCD---------TIDFGCGGGLMDNAFNWIVNSNGGNVFTEAS 213

Query: 232 YPYTGTDG--GSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYI 289
           YPY   +G    C+ +  +I AA+++   +  DED +AA L ++GPLA+ ++A     Y 
Sbjct: 214 YPYVSGNGEQPQCQMNGHEIGAAITDHVDLPQDEDAIAAYLAENGPLAIAVDATSFMDYN 273

Query: 290 GGV--SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICM 347
           GG+  SC     + LDHGVL+VGY  +          PYWIIKNSW   WGE+GY +I  
Sbjct: 274 GGILTSC---TSEQLDHGVLLVGYNDN-------SNPPYWIIKNSWSNMWGEDGYIRIEK 323

Query: 348 GRNVCGVDSMVSS 360
           G N C ++  VSS
Sbjct: 324 GTNQCLMNQAVSS 336


>gi|16076437|emb|CAC94443.1| cysteine proteinase [Betula pendula]
          Length = 133

 Score =  234 bits (597), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 106/133 (79%), Positives = 123/133 (92%)

Query: 193 DHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAA 252
           DHECDPEE GSCDSGC+GGLMNSAFEY LKAGG+ RE+DYPYTGTD  +CKFDKSKIAA+
Sbjct: 1   DHECDPEEQGSCDSGCSGGLMNSAFEYTLKAGGLMREEDYPYTGTDRSTCKFDKSKIAAS 60

Query: 253 VSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYG 312
           VSNFSVIS DEDQ+AANLVK+GPLAV INAV+MQT++GGVSCPYIC + LDHGVL+VG+G
Sbjct: 61  VSNFSVISLDEDQIAANLVKNGPLAVAINAVFMQTHVGGVSCPYICSRRLDHGVLLVGFG 120

Query: 313 SSGFAPIRFKEKP 325
           S+G++P+R KEKP
Sbjct: 121 SAGYSPVRMKEKP 133


>gi|340053968|emb|CCC48262.1| cysteine peptidase, Clan CA, family C1,Cathepsin L-like, fragment,
           partial [Trypanosoma vivax Y486]
          Length = 323

 Score =  234 bits (596), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 133/312 (42%), Positives = 173/312 (55%), Gaps = 26/312 (8%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEF 109
           E  F+ FK K+ ++Y T  E  +R RVF+ N+RR++     +P A  GVT FSDLTP EF
Sbjct: 31  EPLFAAFKQKYGRSYGTAAEEAFRLRVFEDNMRRSRMYAAANPHATFGVTPFSDLTPEEF 90

Query: 110 RRQFLGLNRRLRLPADAQKAPI-LPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATG 168
           R ++    R         +  + +P    P   DWR  GAVT VKDQG CGSCWSFSA G
Sbjct: 91  RTRYHNGERHFEAARGRVRTLVQVPPGKAPAAVDWRRKGAVTPVKDQGRCGSCWSFSAIG 150

Query: 169 ALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK--AGGV 226
            +EG    +   L SLSEQ LV CD +         D+GC GG M++AFE+I+K  +G V
Sbjct: 151 NIEGQWAAAGNPLTSLSEQMLVSCDFK---------DNGCGGGFMDNAFEWIVKENSGKV 201

Query: 227 EREKDYPYTGTDGGS--CKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW 284
             EK YPY   DG    C     ++ A ++    I  DED +A  L  +GP+AV ++A  
Sbjct: 202 YTEKSYPYVSEDGSKPFCIPYGHEVGATITGHVDIPHDEDAIAKYLADNGPVAVAVDATT 261

Query: 285 MQTYIGGV--SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGY 342
             +Y GGV  SC     + L+HGVL+VGY  S        + PYWIIKNSW  +WGE GY
Sbjct: 262 FMSYSGGVVTSC---TSEALNHGVLLVGYNDS-------SKPPYWIIKNSWSSSWGEKGY 311

Query: 343 YKICMGRNVCGV 354
            +I  G N C V
Sbjct: 312 IRIEKGTNQCLV 323


>gi|302763831|ref|XP_002965337.1| hypothetical protein SELMODRAFT_230602 [Selaginella moellendorffii]
 gi|300167570|gb|EFJ34175.1| hypothetical protein SELMODRAFT_230602 [Selaginella moellendorffii]
          Length = 343

 Score =  234 bits (596), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 143/364 (39%), Positives = 200/364 (54%), Gaps = 46/364 (12%)

Query: 4   LILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKT 63
           +I S+L+LL++      A+A        R     DG       L  ++ F  + +K  K+
Sbjct: 5   MIASTLILLVVVGATPFAIA--------RPAALEDGRA-----LEIKNMFEDWAAKHGKS 51

Query: 64  YATQEEHDYRFRVFKANLRRAKRRQLL-DPTAVHGVTKFSDLTPSEFRRQFLGLNRRLR- 121
           Y++  E   R  +F   L   ++     + T   G+ KFSDLT +EFR   +G  +R R 
Sbjct: 52  YSSDLEKARRLMIFSDTLAYIEKHNAQPNTTFTLGLNKFSDLTNAEFRAMHVGKFKRPRY 111

Query: 122 ---LPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLST 178
              LPA+ +   +   + LPT  DWR  GAVT +KDQG CGSCW+FSA  ++E AHFL+T
Sbjct: 112 QDRLPAEDEDVDV---SSLPTSLDWRQKGAVTPIKDQGDCGSCWAFSAIASIESAHFLAT 168

Query: 179 GELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTD 238
            ELVSLSEQQL+DCD         + D+GC+GGLM +AF++++K GGV  E  YPYTG+ 
Sbjct: 169 KELVSLSEQQLMDCD---------TVDAGCDGGLMETAFKFVVKNGGVTTEASYPYTGS- 218

Query: 239 GGSCKFDKSKI---AAAVSNFSVISSDEDQMAANLVKHGPLAVGI--NAVWMQTYIGGVS 293
            GSC  +K  I    A ++ F V++ D        V   P+ V I  +    Q Y  G+ 
Sbjct: 219 VGSCNANKVAIINKVAEITGFKVVTEDSADALMKAVSKTPVTVSICGSDENFQNYKSGIL 278

Query: 294 CPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICM--GRNV 351
               CG  LDHGVL++GYG+ G         PYWIIKNSWG +WGE+G+ KI    G  +
Sbjct: 279 SGQ-CGDSLDHGVLLIGYGTEG-------GMPYWIIKNSWGTSWGEDGFMKIERKDGDGI 330

Query: 352 CGVD 355
           CG++
Sbjct: 331 CGMN 334


>gi|68304200|ref|YP_249668.1| VCATH [Chrysodeixis chalcites nucleopolyhedrovirus]
 gi|67973029|gb|AAY83995.1| VCATH [Chrysodeixis chalcites nucleopolyhedrovirus]
          Length = 344

 Score =  233 bits (595), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 133/360 (36%), Positives = 196/360 (54%), Gaps = 30/360 (8%)

Query: 10  LLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEE 69
           ++L    V AS    N  DA+I  V  +   + + +L  A  +F  F++K+ K YA   E
Sbjct: 4   IILFFVFVFASGGFDNGVDAIIDYVTAAPQFKLQYNLERAPQYFETFQTKYKKVYADDNE 63

Query: 70  HDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKA 129
            DYR+++FK NL     +   + +AV+ + KF+DLT +E   +F GL   +R PA     
Sbjct: 64  RDYRYKIFKTNLEIINLKNQQNDSAVYNINKFADLTKNEVIAKFTGLG--IRSPALKNSC 121

Query: 130 -PIL---PTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLS 185
            P++   P+      FDWR    +T VKDQG CGSCW+FS    LE  + +   E V LS
Sbjct: 122 EPVIVDGPSKYTQETFDWRQFNKITSVKDQGFCGSCWAFSTIAGLESQYAIKYNEHVDLS 181

Query: 186 EQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFD 245
           EQQLVDCD         + D GC GGL+++A+E I+  GG+E E+DYPY     G C+  
Sbjct: 182 EQQLVDCD---------TIDMGCAGGLLHTAYEEIMAMGGLEYEEDYPYRSVQ-GPCRLQ 231

Query: 246 KSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKY-LD 303
             K   +V N +  +   ED++   L + GP+AV ++AV +  Y GG+     C  Y L+
Sbjct: 232 SDKFEVSVDNCYRYVLYSEDKLKDVLHEMGPIAVAVDAVDLTDYYGGIITS--CKNYGLN 289

Query: 304 HGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAA 363
           H VL+VGYG            P+W++KNSWG ++GENG+ ++    N CG   M++ +AA
Sbjct: 290 HAVLLVGYGIENGV-------PFWVLKNSWGSDYGENGFVRVKRNVNSCG---MINELAA 339


>gi|343472324|emb|CCD15484.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 445

 Score =  233 bits (595), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 132/318 (41%), Positives = 177/318 (55%), Gaps = 26/318 (8%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEF 109
           +  F+ FK K+S++Y    E  +RFRVFK N+ RAK     +P A  GVT+FSD++P EF
Sbjct: 38  QQQFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSPEEF 97

Query: 110 RRQFL-GLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATG 168
           R  +  G           +K   + T   P   DWR  GAVT VKDQG CGSCW+FSA G
Sbjct: 98  RATYHNGAEYYAAALKRPRKVVTVSTGKAPEAVDWRKKGAVTPVKDQGQCGSCWAFSAIG 157

Query: 169 ALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA--GGV 226
            +EG   ++  EL SLSEQ LV     CDP E       C GG M++AF +I+ +  G V
Sbjct: 158 NIEGQWKVAGHELTSLSEQTLVS----CDPTE-----YACEGGFMDNAFRWIISSNKGKV 208

Query: 227 EREKDYPYT--GTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW 284
             E+ YPY+  G +  +C      + A +S++  +  DE+ +A  L K+GP++V ++A  
Sbjct: 209 FTEQSYPYSSGGRNVPACNMSGKVVGANISDYVDLPQDENAIAEWLAKNGPVSVIVDATS 268

Query: 285 MQTYIGGV--SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGY 342
            Q+Y GGV  SC     K L+H VL+VGY  +        + PYWIIKNSW E WGE GY
Sbjct: 269 FQSYTGGVLTSC---LSKILNHAVLLVGYDDTS-------KPPYWIIKNSWSEKWGEKGY 318

Query: 343 YKICMGRNVCGVDSMVSS 360
            +I  G N C V    SS
Sbjct: 319 IRIEKGTNQCLVQEYASS 336


>gi|10391|emb|CAA38238.1| unnamed protein product [Trypanosoma brucei]
          Length = 450

 Score =  233 bits (594), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 143/373 (38%), Positives = 197/373 (52%), Gaps = 55/373 (14%)

Query: 1   MERLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKF 60
           M R +   ++LL +++ LAS              V       E+ L   E  F+ FK K+
Sbjct: 6   MVRFVRLPVVLLAMAACLAS--------------VALGSLHVEESL---EMRFAAFKKKY 48

Query: 61  SKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ-------F 113
            K Y   +E  +RFR F+ N+ +AK +   +P A  GVT FSD+T  EFR +       F
Sbjct: 49  GKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVTPFSDMTREEFRARYRNGASYF 108

Query: 114 LGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGA 173
               +R+R      K   + T   P   DWR+ GAVT VKDQG CGSCW+FS  G +EG 
Sbjct: 109 AAAQKRVR------KTVNVTTGRAPAAVDWREKGAVTPVKDQGQCGSCWAFSTIGNIEGQ 162

Query: 174 HFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA--GGVEREKD 231
             ++   LVSLSEQ LV CD         + D GC GGLM++AF +I+ +  G V  E  
Sbjct: 163 WQVAGNPLVSLSEQMLVSCD---------TIDFGCGGGLMDNAFNWIVNSNGGNVFTEAS 213

Query: 232 YPYTGTDG--GSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYI 289
           YPY   +G    C+ +  +I AA+++   +  DED +AA L ++GPLA+ ++A     Y 
Sbjct: 214 YPYVSGNGEQPQCQMNGHEIGAAITDHVDLPQDEDAIAAYLAENGPLAIAVDATSFMDYN 273

Query: 290 GGV--SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICM 347
           GG+  SC     + LDHGVL+VGY  +          PYWIIKNSW   WGE+GY +I  
Sbjct: 274 GGILTSC---TSEQLDHGVLLVGYNDN-------SNPPYWIIKNSWSNMWGEDGYIRIEK 323

Query: 348 GRNVCGVDSMVSS 360
           G N C ++  VSS
Sbjct: 324 GTNQCLMNQAVSS 336


>gi|110349473|gb|ABG73217.1| cathepsin L 1 precursor [Diaprepes abbreviatus]
          Length = 322

 Score =  233 bits (594), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 132/308 (42%), Positives = 181/308 (58%), Gaps = 25/308 (8%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAV----HGVTKFSDLTPSE 108
           F  FK K  KTY  Q E   RF +FK NLR  ++  +L    +     G+ +F+D+T  E
Sbjct: 25  FQAFKLKHGKTYKNQVEETARFNIFKDNLRAIEQHNVLYEQGLVSYKKGINRFTDMTQEE 84

Query: 109 FRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATG 168
           FR  FL L+   + P       +L    +P   DWR  G VTGVKDQG CGSCW+FS TG
Sbjct: 85  FR-AFLTLSSSKK-PHFNTTEHVLTGLAVPDSIDWRTKGQVTGVKDQGNCGSCWAFSVTG 142

Query: 169 ALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVER 228
           + E A++   G+LVSLSEQQLVDC        S   ++GCNGG ++  F Y+ K+ G+E 
Sbjct: 143 STEAAYYRKAGKLVSLSEQQLVDC--------STDINAGCNGGYLDETFTYV-KSKGLEA 193

Query: 229 EKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVGINAVWMQT 287
           E  YPY GTD GSCK+  SK+   VS   S+ S DE+ +   +   GP++V I+A ++ +
Sbjct: 194 ESTYPYKGTD-GSCKYSASKVVTKVSGHKSLKSEDENALLDAVGNVGPVSVAIDATYLSS 252

Query: 288 YIGGVSCPYICG-KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKIC 346
           Y  G+     C    L+HGVL+VGYG+S         K YWI+KNSWG ++GE+GY+++ 
Sbjct: 253 YESGIYEDDWCSPSELNHGVLVVGYGTS-------NGKKYWIVKNSWGGSFGESGYFRLL 305

Query: 347 MGRNVCGV 354
            G+N CGV
Sbjct: 306 RGKNECGV 313


>gi|2731635|gb|AAB93494.1| pre-procathepsin L [Paragonimus westermani]
          Length = 325

 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 131/322 (40%), Positives = 186/322 (57%), Gaps = 27/322 (8%)

Query: 48  NAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTP 106
           NA   +  FK  + K YA +++   RF +FK NL RA++ Q  +  TA +GVT+FSDLT 
Sbjct: 27  NARELYEQFKRDYGKAYANEDDQK-RFAIFKDNLVRAQQYQTQEQGTAKYGVTQFSDLTN 85

Query: 107 SEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSA 166
            EF   +LG     R+     +  +      P   DWR+ GAV  V+ QG+CGSCW+FS 
Sbjct: 86  EEFAAMYLGS----RIDERVDRVQLNDLQTAPASVDWREKGAVGPVEHQGSCGSCWAFSV 141

Query: 167 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGV 226
           T  +EG  FL TG LVSLS+QQLVDCD           D GC+GG     ++ I + GG+
Sbjct: 142 TANVEGQWFLKTGRLVSLSKQQLVDCDR---------LDHGCSGGYPPYTYKEIKRMGGL 192

Query: 227 EREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQ 286
           E +  YPYTG +  +C+ D+SK+ A + +  V+  +E++ AA L +HGP++  +NA  +Q
Sbjct: 193 ELQSAYPYTGWE-QACRLDRSKLFAKIDDSIVLEKNEEKQAAWLAEHGPMSTCLNAGPLQ 251

Query: 287 TYIGGVSCP--YICG-KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYY 343
            Y  G+  P  Y C  + L+H VL VGY +        +  PYW ++NSWG  WGENGY+
Sbjct: 252 FYRYGILHPSEYACSPEGLNHAVLTVGYDTE-------RGVPYWTVRNSWGTRWGENGYF 304

Query: 344 KICMGRNVCGVDSMVSSVAAIH 365
           +I  G   CG+D + +S A IH
Sbjct: 305 RIYRGDGTCGIDRLTTS-AIIH 325


>gi|343476708|emb|CCD12273.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 363

 Score =  232 bits (592), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 129/316 (40%), Positives = 178/316 (56%), Gaps = 22/316 (6%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEF 109
           +  F+ FK K+S++Y    E  +RFRVFK N+ RAK     +P A  GVT+FSD++P EF
Sbjct: 38  QQQFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSPEEF 97

Query: 110 RRQFL-GLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATG 168
           R  +  G           +K   + T   P   DWR  GAVT V+D+  C S W+FSA G
Sbjct: 98  RATYHNGAEYYAAALKRPRKVVTVSTGKAPDAVDWRKKGAVTPVRDERLCDSSWAFSAIG 157

Query: 169 ALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA--GGV 226
            +EG   ++  EL SLSEQ L+ CD   D         GC GGLM+ AF++I+ +  G V
Sbjct: 158 NIEGQWKVAGHELTSLSEQMLLSCDTRED---------GCGGGLMDRAFQWIVSSNKGNV 208

Query: 227 EREKDYPYTGTDGGSCKFDKSK--IAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW 284
             E+ YPY  TDG   + +KS   + A +S++  +  DE+ +A  L K+GP+A+ + A  
Sbjct: 209 FTEQSYPYASTDGDVPRCNKSGKVVGAKISDYVDLPQDENAIAEWLAKNGPVAIAVEATS 268

Query: 285 MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYK 344
           +Q Y GGV    I  + LDHGVL+VGY  +        + PYWIIKNSWG+ WGE GY +
Sbjct: 269 LQRYTGGVLTSCI-SEQLDHGVLLVGYDDT-------SKPPYWIIKNSWGKGWGEEGYIR 320

Query: 345 ICMGRNVCGVDSMVSS 360
           I  G N C + +  SS
Sbjct: 321 IEKGTNQCLMKNYASS 336


>gi|444510192|gb|ELV09527.1| Cathepsin F [Tupaia chinensis]
          Length = 597

 Score =  232 bits (591), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 142/324 (43%), Positives = 191/324 (58%), Gaps = 24/324 (7%)

Query: 42  SEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTK 100
           S+D  +     F  F + +++TY T+EE  +R  VF +N+ RA++ Q LD  TA +GVTK
Sbjct: 289 SQDFSVKMASIFKNFVTTYNRTYQTKEEAQWRLSVFASNMVRAQKIQALDHGTAQYGVTK 348

Query: 101 FSDLTPSEFRRQFLGLNRRLR-LPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACG 159
           FSDLT  EFR  +L  N  LR +P           +  P ++DWR +GAVT VKDQG CG
Sbjct: 349 FSDLTEEEFRTIYL--NPLLREVPGKKMHLAKSIGDPAPPEWDWRKNGAVTKVKDQGMCG 406

Query: 160 SCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEY 219
           SCW+FS TG +EG  FL+ G L+SLSEQ+L+DCD           D  C GGL ++A+  
Sbjct: 407 SCWAFSVTGNVEGQWFLNRGTLLSLSEQELLDCD---------KMDKACMGGLPSNAYSA 457

Query: 220 ILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVG 279
           I   GG+E E DY Y G    +C F   K    +++   +S +E ++AA L K GP++V 
Sbjct: 458 IKNLGGLETEDDYSYQG-HMQACNFSAEKAKVYINDSVELSQNEQKLAAWLAKKGPISVA 516

Query: 280 INAVWMQTYIGGVSCPY--ICGKYL-DHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGEN 336
           INA  MQ Y  G++ P   +C  +L DH VLIVGYG+         E P+W IKNSWG +
Sbjct: 517 INAFGMQFYRHGIAHPLRPLCSPWLIDHAVLIVGYGNRS-------EVPFWAIKNSWGTD 569

Query: 337 WGENGYYKICMGRNVCGVDSMVSS 360
           WGE GYY +  G   CGV++M SS
Sbjct: 570 WGEKGYYYLHRGSGSCGVNTMASS 593


>gi|291385469|ref|XP_002709277.1| PREDICTED: cathepsin F [Oryctolagus cuniculus]
          Length = 460

 Score =  231 bits (590), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 142/345 (41%), Positives = 195/345 (56%), Gaps = 26/345 (7%)

Query: 24  VNDDDAMIRQVVPSDGEQS--EDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANL 81
             D +  ++  +P+    S  +D  +     F  F   +++TY ++EE  +R  VF +N+
Sbjct: 132 TEDRNETLKSTLPALNRDSLPQDFSVKMASIFKKFVRTYNRTYESKEEAQWRLSVFASNM 191

Query: 82  RRAKRRQLLDP-TAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTND-LPT 139
            RA++ Q LD  TA +G+TKFSDLT  EFR  +L  N  LR     +     P  D  P 
Sbjct: 192 VRAQKIQSLDRGTAQYGITKFSDLTEEEFRTIYL--NPLLRSEPGKKMQLAKPVEDPAPP 249

Query: 140 DFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPE 199
            +DWR  GAVT VKDQG CGSCW+FS TG +EG  FL  G L+SLSEQ+L+DCD      
Sbjct: 250 QWDWRSKGAVTNVKDQGMCGSCWAFSVTGNVEGQWFLKRGTLLSLSEQELLDCDK----- 304

Query: 200 ESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVI 259
                D  C GGL ++A+  I   GG+E E+DY Y G    +C F   K    +++   +
Sbjct: 305 ----LDKACLGGLPSNAYSAIKNLGGLETEEDYTYQG-HMQACNFSAQKAKVYINDSVEL 359

Query: 260 SSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPY--ICGKYL-DHGVLIVGYGSSGF 316
           S +E ++AA L K GP++V INA  MQ Y  G++ P   +C  +L DH VL+VGYG+   
Sbjct: 360 SQNEQKLAAWLAKRGPISVAINAFGMQFYRRGIAHPLRPLCSPWLIDHAVLLVGYGNRS- 418

Query: 317 APIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSV 361
                   P+W IKNSWG +WGE GYY +  G  VCGV++M SS 
Sbjct: 419 ------ATPFWAIKNSWGADWGEEGYYYLYRGSGVCGVNTMASSA 457


>gi|296218871|ref|XP_002755611.1| PREDICTED: cathepsin F [Callithrix jacchus]
          Length = 489

 Score =  231 bits (589), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 141/322 (43%), Positives = 187/322 (58%), Gaps = 23/322 (7%)

Query: 43  EDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKF 101
           +D  +     F  F   +++TY ++EE  +R  VF  N+ RA++ Q LD  TA +GVTKF
Sbjct: 183 QDLAVKMASIFRNFVITYNRTYESKEEAQWRLSVFVHNMVRAQKIQALDRGTAQYGVTKF 242

Query: 102 SDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSC 161
           SDLT  EFR  +L  N  LR P    K      +  P ++DWR  GAVT VKDQG CGSC
Sbjct: 243 SDLTEEEFRTTYL--NPLLREPGKKMKQAKSVGDLAPPEWDWRSKGAVTKVKDQGMCGSC 300

Query: 162 WSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYIL 221
           W+FS TG +EG  FL+ G L+SLSEQ+L+DCD           D  C GGL +SA+  I 
Sbjct: 301 WAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDK---------IDKACMGGLPSSAYSAIK 351

Query: 222 KAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGIN 281
             GG+E E DY Y G    +C F   K    +++   +S +E ++AA L K GP++V IN
Sbjct: 352 NLGGLETEDDYSYRG-HMQACNFSPEKAKVYINDSVELSQNEQKLAAWLAKRGPISVAIN 410

Query: 282 AVWMQTYIGGVSCPY--ICGKYL-DHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWG 338
           A  MQ Y  G+S P   +C  +L DH VL+VGYG+         + P+W IKNSWG +WG
Sbjct: 411 AFGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNR-------SDVPFWAIKNSWGTDWG 463

Query: 339 ENGYYKICMGRNVCGVDSMVSS 360
           E GYY +  G   CGV++M SS
Sbjct: 464 EKGYYYLHRGSGACGVNTMASS 485


>gi|74229746|ref|YP_308950.1| cathepsin [Trichoplusia ni SNPV]
 gi|72259660|gb|AAZ67431.1| cathepsin [Trichoplusia ni SNPV]
          Length = 344

 Score =  231 bits (588), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 132/362 (36%), Positives = 199/362 (54%), Gaps = 34/362 (9%)

Query: 10  LLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEE 69
           ++L    V+AS    N  +A+I  V  +   + + +L  A  +F  F++K+ K YA   E
Sbjct: 4   IILFFVFVVASGGLDNGVNAVIDYVAAAPHFKLQYNLERAPQYFETFQTKYKKVYADDNE 63

Query: 70  HDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRR---LRLPADA 126
            DYR+++FK NL     +   + +AV+ + KF+DLT +E   +F GL  +   L+   D 
Sbjct: 64  RDYRYKIFKTNLEIINLKNQQNDSAVYNINKFADLTKNEVIAKFTGLGVKSPNLKNFCD- 122

Query: 127 QKAPIL---PTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVS 183
              P++   P+      FDWR    +T VKDQG CGSCW+FS    LE  + +   E + 
Sbjct: 123 ---PLIVDGPSKYTQETFDWRQFNKITSVKDQGFCGSCWAFSTIAGLESQYAIKYNEHID 179

Query: 184 LSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCK 243
           LSEQQLVDCD         + D GC GGL+++A+E I+  GGVE E+DYPY     G C+
Sbjct: 180 LSEQQLVDCD---------TIDMGCAGGLLHTAYEEIMSMGGVEYEEDYPYRSVQ-GPCR 229

Query: 244 FDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKY- 301
            +  K   +V N +  I   ED++   L + GP+AV ++AV +  Y GG+     C  Y 
Sbjct: 230 IENDKFQVSVDNCYRYILYSEDKLKDVLHEMGPIAVAVDAVDLTDYYGGIITS--CKNYG 287

Query: 302 LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSV 361
           L+H VL+VGYG+           P+W++KNSWG ++GENG+ ++    N CG   M++ +
Sbjct: 288 LNHAVLLVGYGTENGI-------PFWVLKNSWGTDYGENGFVRVKRNVNSCG---MINEL 337

Query: 362 AA 363
           AA
Sbjct: 338 AA 339


>gi|344295816|ref|XP_003419606.1| PREDICTED: cathepsin F [Loxodonta africana]
          Length = 473

 Score =  231 bits (588), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 141/326 (43%), Positives = 191/326 (58%), Gaps = 24/326 (7%)

Query: 41  QSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVT 99
           Q +D        F  F + +++TY T+EE  +R  VF  N+ RA++ Q LD  TA +G+T
Sbjct: 164 QPQDFSGKMASIFKNFVTTYNRTYETKEETKWRMSVFANNMIRAQKLQALDQGTAQYGIT 223

Query: 100 KFSDLTPSEFRRQFLGLNRRLRL-PADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGAC 158
           KFSDLT  EFR  +L  N  LR  P    +    P   +P D+DWR  GAVT VKDQG C
Sbjct: 224 KFSDLTEEEFRTIYL--NPLLREDPGQKMRLGKAPKGPVPPDWDWRTKGAVTKVKDQGMC 281

Query: 159 GSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFE 218
           GSCW+FS TG +EG  FL+ G L+SLSEQ+L+DCD           D  C GG+ ++A+ 
Sbjct: 282 GSCWAFSVTGNVEGQWFLNRGTLLSLSEQELLDCD---------KVDKACMGGVPSNAYS 332

Query: 219 YILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAV 278
            I   GG+E E+DY Y G    +C F   K    +++   +S +E ++AA L K+GP++V
Sbjct: 333 AIKTLGGLETEEDYSYHG-HLQACSFSAEKAKVYINDSVELSQNEYKLAAWLAKNGPISV 391

Query: 279 GINAVWMQTYIGGVSCPY--ICGKYL-DHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGE 335
            INA  MQ Y  G++ P   +C  +L DH VLIVGYG+         + P+W IKNSWG 
Sbjct: 392 AINAFGMQFYRHGIAHPLRPLCSPWLIDHAVLIVGYGNR-------SDVPFWAIKNSWGT 444

Query: 336 NWGENGYYKICMGRNVCGVDSMVSSV 361
           +WGE GYY +  G   CGV++M SS 
Sbjct: 445 DWGEEGYYYLHRGSGACGVNTMASSA 470


>gi|302790828|ref|XP_002977181.1| hypothetical protein SELMODRAFT_106402 [Selaginella moellendorffii]
 gi|300155157|gb|EFJ21790.1| hypothetical protein SELMODRAFT_106402 [Selaginella moellendorffii]
          Length = 337

 Score =  230 bits (586), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 142/362 (39%), Positives = 200/362 (55%), Gaps = 44/362 (12%)

Query: 4   LILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKT 63
           +I S+L+LL++      A+A        R     DG       L  ++ F  + +K  K+
Sbjct: 1   MIASTLILLVVVGATPFAIA--------RPAALEDGRA-----LEIKNMFEDWAAKHGKS 47

Query: 64  YATQEEHDYRFRVFKANLRRAKRRQLL-DPTAVHGVTKFSDLTPSEFRRQFLGLNRRLR- 121
           Y++  E   R  +F   L   ++     + T   G+ KFSDLT +EFR   +G  +R R 
Sbjct: 48  YSSDWEKARRLMIFSDTLAYIEKHNAQPNTTFTLGLNKFSDLTNAEFRAMHVGKFKRPRY 107

Query: 122 ---LPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLST 178
              LPA+ +   +   + LPT  DWR  GAVT +KDQG CGSCW+FSA  ++E AHFL+T
Sbjct: 108 QDRLPAEDEDVDV---SSLPTSLDWRQKGAVTPIKDQGDCGSCWAFSAIASIESAHFLAT 164

Query: 179 GELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTD 238
            ELVSLSEQQL+DCD         + D+GC+GGLM +AF++++K GGV  E  YPYTG+ 
Sbjct: 165 KELVSLSEQQLMDCD---------TVDAGCDGGLMETAFKFVVKNGGVTTEAAYPYTGS- 214

Query: 239 GGSCKFDKSK-IAAAVSNFSVISSDEDQMAANLVKHGPLAVGI--NAVWMQTYIGGVSCP 295
            GSC  +K+K   A ++ F V++ D        V   P+ V I  +    Q Y  G+   
Sbjct: 215 VGSCNANKAKNKVAEITGFKVVTEDSADALMKAVSKTPVTVSICGSDENFQNYKSGI-LS 273

Query: 296 YICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICM--GRNVCG 353
             C   LDHGVL++GYG+ G         PYWIIKNSWG +WGE+G+ KI    G  +CG
Sbjct: 274 GKCDDSLDHGVLLIGYGTEG-------GMPYWIIKNSWGTSWGEDGFMKIERKDGDGMCG 326

Query: 354 VD 355
           ++
Sbjct: 327 MN 328


>gi|335281454|ref|XP_003122543.2| PREDICTED: cathepsin F [Sus scrofa]
 gi|350579927|ref|XP_003480717.1| PREDICTED: cathepsin F-like [Sus scrofa]
          Length = 490

 Score =  230 bits (586), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 140/329 (42%), Positives = 188/329 (57%), Gaps = 34/329 (10%)

Query: 43  EDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKF 101
           +D  +     F  F + +++TY T+EE  +R  VF  N+ RA++ Q LD  TA +GVTKF
Sbjct: 183 QDFSVKMASIFKEFVTTYNRTYDTKEEARWRMSVFANNMVRAQKIQALDTGTARYGVTKF 242

Query: 102 SDLTPSEFRRQFLGL------NRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQ 155
           SDLT  EFR  +L         R++RL       P       P ++DWR  GAVT VKDQ
Sbjct: 243 SDLTEEEFRTIYLNPLLQEEPGRKMRLAKSVSSLP-------PPEWDWRKKGAVTKVKDQ 295

Query: 156 GACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNS 215
           G CGSCW+FS TG +EG  FL  G L+SLSEQ+L+DCD           D GC GGL ++
Sbjct: 296 GMCGSCWAFSVTGNVEGQWFLKQGTLLSLSEQELLDCDK---------VDKGCMGGLPSN 346

Query: 216 AFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGP 275
           A+  I   GG+E E+DY Y G    +C F+  K    +++   +S +E ++AA L + GP
Sbjct: 347 AYSAIKTLGGLETEEDYSYRG-HLQTCSFNAEKAKVYINDSVELSQNEQKLAAWLAEKGP 405

Query: 276 LAVGINAVWMQTYIGGVSCPY--ICGKYL-DHGVLIVGYGSSGFAPIRFKEKPYWIIKNS 332
           ++V INA  MQ Y  G+S P   +C  +L DH VL+VGYG+           P+W IKNS
Sbjct: 406 ISVAINAFGMQFYRHGISHPLRPLCSPWLIDHAVLLVGYGNRS-------ATPFWAIKNS 458

Query: 333 WGENWGENGYYKICMGRNVCGVDSMVSSV 361
           WG +WGE GYY +  G   CGV+ M SS 
Sbjct: 459 WGTDWGEEGYYYLYRGSGACGVNIMASSA 487


>gi|345783063|ref|XP_533219.3| PREDICTED: LOW QUALITY PROTEIN: cathepsin F [Canis lupus
           familiaris]
          Length = 490

 Score =  229 bits (584), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 142/343 (41%), Positives = 197/343 (57%), Gaps = 25/343 (7%)

Query: 25  NDDDAMIRQVVP--SDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLR 82
           +D +  +  V+P  +     +D  +     F  F + +++TY T+EE ++R  VF  N+ 
Sbjct: 162 DDRNETLSSVLPLLNKDPLPQDFSVKMASVFKEFVTTYNRTYETKEEAEWRMSVFSNNMV 221

Query: 83  RAKRRQLLDP-TAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDF 141
           RA++ Q LD  TA +G+TKFSDLT  EFR  +L    R       + A  +  +  P ++
Sbjct: 222 RAQKIQALDRGTAQYGITKFSDLTEEEFRTIYLNPLLRENRGKKMRLAKSISDHAPPPEW 281

Query: 142 DWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEES 201
           DWR  GAVT VKDQG CGSCW+FS TG +EG  FL  G L+SLSEQ+L+DCD        
Sbjct: 282 DWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLKEGTLLSLSEQELLDCD-------- 333

Query: 202 GSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISS 261
              D  C GGL ++A+  I+  GG+E E DY Y G    +C F   K    +++   +S 
Sbjct: 334 -KVDKACLGGLPSNAYSAIMTLGGLETEDDYSYQG-HLQACSFSAKKARVYINDSMELSQ 391

Query: 262 DEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPY--ICGKYL-DHGVLIVGYGS-SGFA 317
           +E ++AA L K GP++V INA  MQ Y  G+S P   +C  +L DH VL+VGYG+ SG  
Sbjct: 392 NEQKLAAWLAKKGPISVAINAFGMQFYRHGISHPLRPLCSPWLIDHAVLLVGYGNRSGI- 450

Query: 318 PIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSS 360
                  P+W IKNSWG +WGE GYY +  G   CGV++M SS
Sbjct: 451 -------PFWAIKNSWGTDWGEEGYYYLHRGSGACGVNTMASS 486


>gi|217323618|gb|ACK38176.1| midgut cysteine peptidase, partial [Sphenophorus levis]
          Length = 324

 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 135/360 (37%), Positives = 189/360 (52%), Gaps = 51/360 (14%)

Query: 1   MERLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKF 60
           M+  IL+SLL++ +S+ L                +  DG            HF  FK K 
Sbjct: 1   MKSFILASLLVVAVSATL----------------LKEDGV-----------HFQSFKLKH 33

Query: 61  SKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH----GVTKFSDLTPSEFRRQFLGL 116
            KTY  Q E   RF +F+ NLR+ +         +H    G+ KF+D+T +EF+   L  
Sbjct: 34  GKTYKNQAEETKRFAIFRENLRKIEAHNAEYKQGIHSYTQGINKFADMTRAEFK-AMLAT 92

Query: 117 NRRLRLPADAQKAPILPTN-DLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHF 175
             + +    A K   L     +P   DWR    VT +KDQ  CGSCWSF+  G+ EGA+ 
Sbjct: 93  QVKTKPSIVATKTFQLADGVSVPESIDWRSRNVVTPIKDQAQCGSCWSFAVVGSTEGAYA 152

Query: 176 LSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYT 235
           LSTG+L   SEQQLVDC        +   + GC+GG ++  F YI +  G+E E DYPYT
Sbjct: 153 LSTGKLTRFSEQQLVDC--------TTDLNYGCDGGYLDDTFPYI-QTNGLELESDYPYT 203

Query: 236 GTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCP 295
           G D GSC +D SK+   VS++  + ++E  +   +   GP+A+ INA  +Q Y  G+   
Sbjct: 204 GYD-GSCSYDSSKVVTKVSSYVSVPANEQALLEAVGTAGPVAIAINADDLQFYFSGIIDD 262

Query: 296 YICG-KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGV 354
             C  ++LDHGVL VGY S            YW+IKNSWG +WGE+GY++   G+N+CGV
Sbjct: 263 KYCDPEWLDHGVLAVGYNSE-------NGLDYWLIKNSWGADWGESGYFRFLRGQNICGV 315


>gi|1136312|gb|AAB41118.1| cruzipain [Trypanosoma cruzi]
          Length = 383

 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 134/322 (41%), Positives = 169/322 (52%), Gaps = 34/322 (10%)

Query: 52  HFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRR 111
            F+ FK K  + Y +  E  +R  VF+ANL  A+     +P A  GVT FSDLT  EFR 
Sbjct: 37  QFAEFKQKHGRVYGSAAEEAFRLSVFRANLFLARLHAAANPHATFGVTAFSDLTREEFRS 96

Query: 112 Q-------FLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSF 164
           +       F     R R+P + +          P   DWR  GAVT VKDQG CGSCW+F
Sbjct: 97  RYHNGAAHFAAAQERARVPVNVEVV------GAPAAVDWRARGAVTAVKDQGQCGSCWAF 150

Query: 165 SATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA- 223
           SA G +E   FL+   L +LSEQ LV CD           DSGC GGLMN+AFE+I++  
Sbjct: 151 SAIGNVECQWFLAGHPLTNLSEQMLVSCDKT---------DSGCGGGLMNNAFEWIVQEN 201

Query: 224 -GGVEREKDYPYTGTDGGS--CKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGI 280
            G V  E  YPY   +G S  C      + A ++    +  DE Q+AA L  +GP+AV +
Sbjct: 202 NGAVYTEDSYPYASGEGISPPCTTSGHTVGATITGHVELPQDEAQIAAWLAVNGPVAVAV 261

Query: 281 NAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGEN 340
           +A    TY GGV    +  + LDHGVL+VGY  S          PYW+IKNSW   WGE+
Sbjct: 262 DASSWMTYTGGVMTSCV-SEQLDHGVLLVGYNDSA-------AVPYWVIKNSWTTQWGED 313

Query: 341 GYYKICMGRNVCGVDSMVSSVA 362
           GY +I  G N C V    SS A
Sbjct: 314 GYIRIAKGSNQCLVKEEASSAA 335


>gi|146335580|gb|ABQ23399.1| cathepsin L isotype 2 [Trypanoplasma borreli]
          Length = 443

 Score =  229 bits (583), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 130/333 (39%), Positives = 185/333 (55%), Gaps = 56/333 (16%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           FS FK+  ++ Y +  E   RF +F AN+++A      +P A  G  +F+D++  EF+ +
Sbjct: 25  FSDFKATHARNYVSPGEERKRFEIFAANMKKAAELNRKNPMATFGPNEFADMSSEEFQTR 84

Query: 113 F-----------------LGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQ 155
                                 +     AD QK             DWR  GAVT VK+Q
Sbjct: 85  HNAARHYAAAKARRAKHTKSFTKEEIKAADGQK------------IDWRLKGAVTSVKNQ 132

Query: 156 GACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNS 215
           G+CGSCWSFS TG +EG + ++TG LVSLSEQ+LV CD         + D+GCNGGLM++
Sbjct: 133 GSCGSCWSFSTTGNIEGQNAIATGNLVSLSEQELVSCD---------TTDNGCNGGLMDN 183

Query: 216 AFEYIL--KAGGVEREKDYPYTGTDG--GSCKF--DKSKIAAAVSNFSVISSDEDQMAAN 269
           AF +++  + G +  E  YPY   +G   +C +  D   + A +SNF  I+  E+ MAA 
Sbjct: 184 AFGWLISTRGGQIATEASYPYVSGNGIVPACSYNLDNKPVGATISNFQDITGTEEDMAAF 243

Query: 270 LVKHGPLAVGINAVWMQTYIGGV--SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYW 327
           +  +GPL++G++A   Q+Y GG+   CP +    +DHGVLIVGY  +  AP      PYW
Sbjct: 244 VFNYGPLSIGVDASTWQSYAGGIITYCPDV---QIDHGVLIVGYDDT--AP-----TPYW 293

Query: 328 IIKNSWGENWGENGYYKICMGRNVCGVDSMVSS 360
           IIKNSW  NWGE+GY ++  G N+CG+ S  SS
Sbjct: 294 IIKNSWTANWGEDGYIRVAKGSNMCGLTSTPSS 326


>gi|328870281|gb|EGG18656.1| hypothetical protein DFA_04151 [Dictyostelium fasciculatum]
          Length = 347

 Score =  229 bits (583), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 140/374 (37%), Positives = 200/374 (53%), Gaps = 57/374 (15%)

Query: 1   MERLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKF 60
           +++LI++ LLL+ L+S   S ++                          E  F  F+ K+
Sbjct: 2   IKKLIVAILLLVALASARTSNLSF------------------------EETQFREFQLKY 37

Query: 61  SKTYATQEEHDY--RFRVFKANLRRAK------RRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           +K Y   E H++  +   FK +L+R +      +R  +D     GV KF+DL+  EF   
Sbjct: 38  NKHY---ESHEFAQKLATFKNSLKRIQELNDMAKRAKVDTE--FGVNKFADLSKEEFANY 92

Query: 113 FLGLNRRLRLPADAQK-APILP---TNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATG 168
           +L  N+      D++  AP       ++LPT FDWR  GAVT VKDQG CGSCWSFS TG
Sbjct: 93  YL--NKGGMESTDSETYAPDYSDKEISNLPTSFDWRTQGAVTPVKDQGQCGSCWSFSTTG 150

Query: 169 ALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVER 228
            +EG  FL+  +L  LSEQ LVDC  + D         GCNGGLM  A++YI++  G++ 
Sbjct: 151 NVEGQWFLAGNDLTGLSEQNLVDCSTKND---------GCNGGLMPLAYDYIVENNGIDT 201

Query: 229 EKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTY 288
           E  YPY      +C+F+ + I A +  +  +SS+E QM  NLV +GPL++  +A   Q Y
Sbjct: 202 EASYPYLAIQQKNCQFNPANIGAKIDGYYNVSSNETQMQINLVNNGPLSIAADAAEWQYY 261

Query: 289 IGGVSCPY--ICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKIC 346
             G+      ICGK LDHG+LIVGYG        F  + +WIIKNSW  +WG +G+  I 
Sbjct: 262 KKGIFSGIFGICGKNLDHGILIVGYGQQ---TTEFGTELFWIIKNSWSTDWGLSGFMLIK 318

Query: 347 MGRNVCGVDSMVSS 360
            G   CG++  V+S
Sbjct: 319 RGTGECGINLAVTS 332


>gi|397517049|ref|XP_003828732.1| PREDICTED: cathepsin F [Pan paniscus]
          Length = 379

 Score =  229 bits (583), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 141/313 (45%), Positives = 185/313 (59%), Gaps = 24/313 (7%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTPSEFRR 111
           F  F   +++TY ++EE  +R  VF  N+ RA++ Q LD  TA +GVTKFSDLT  EFR 
Sbjct: 82  FKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEEEFRT 141

Query: 112 QFLGLNRRLRLPADAQKAPILPTNDL-PTDFDWRDHGAVTGVKDQGACGSCWSFSATGAL 170
            +L  N  LR     +        DL P ++DWR  GAVT VKDQG CGSCW+FS TG +
Sbjct: 142 IYL--NPLLRKEPGNKMKQAKSVGDLAPPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNV 199

Query: 171 EGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREK 230
           EG  FL+ G L+SLSEQ+L+DCD           D  C GGL ++A+  I   GG+E E 
Sbjct: 200 EGQWFLNQGTLLSLSEQELLDCDK---------MDKACMGGLPSNAYSAIKNLGGLETED 250

Query: 231 DYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIG 290
           DY Y G    SC F   K    +++  V+S +E ++AA L K GP++V INA  MQ Y  
Sbjct: 251 DYSYQG-HMQSCNFSAEKAKVYINDSVVLSQNEQKLAAWLAKRGPISVAINAFGMQFYRH 309

Query: 291 GVSCPY--ICGKYL-DHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICM 347
           G+S P   +C  +L DH VL+VGYG+         + P+W IKNSWG +WGE GYY +  
Sbjct: 310 GISRPLRPLCSPWLIDHAVLLVGYGNR-------SDVPFWAIKNSWGTDWGEKGYYYLHR 362

Query: 348 GRNVCGVDSMVSS 360
           G   CGV++M SS
Sbjct: 363 GSGACGVNTMASS 375


>gi|375073978|gb|AFA34856.1| cathepsin L-like protein [Trypanosoma cruzi]
          Length = 467

 Score =  229 bits (583), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 139/368 (37%), Positives = 187/368 (50%), Gaps = 53/368 (14%)

Query: 4   LILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKT 63
           L L+++L+++   V A+  +++ ++ +  Q                   F+ FK K  + 
Sbjct: 8   LSLAAVLVVMACLVPAATASLHAEETLASQ-------------------FAEFKQKHGRV 48

Query: 64  YATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ-------FLGL 116
           Y +  E  +R  VF+ NL  A+     +P A  GVT FSDLT  EFR +       F   
Sbjct: 49  YESAAEEAFRLSVFRENLFLARLHAAANPHATFGVTPFSDLTREEFRSRYHNGAAHFAAA 108

Query: 117 NRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFL 176
             R R+P + +          P   DWR  GAVT VKDQG CGSCW+FSA G +E   FL
Sbjct: 109 QERARVPVNVEVV------GAPAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFL 162

Query: 177 STGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA--GGVEREKDYPY 234
           +   L +LSEQ LV CD           DSGC+GGLMN+AFE+I++   G V  E  YPY
Sbjct: 163 AGHPLTNLSEQMLVSCDKT---------DSGCSGGLMNNAFEWIVQENNGAVYTEDSYPY 213

Query: 235 TGTDGGS--CKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGV 292
              +G S  C      + A ++    +  DE Q+AA L  +GP+AVG++A    TY GGV
Sbjct: 214 ASGEGISPPCTTSGHTVGATITGHVELPQDEAQIAAWLAVNGPVAVGVDASSWMTYTGGV 273

Query: 293 SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVC 352
               +  + LDHGVL+VGY  S          PYWIIKNSW   WGE GY ++  G N C
Sbjct: 274 MTSCV-SEQLDHGVLLVGYNDSAAV-------PYWIIKNSWTTQWGEGGYIRVAKGSNQC 325

Query: 353 GVDSMVSS 360
            V    SS
Sbjct: 326 LVKEEASS 333


>gi|115495381|ref|NP_001068884.1| cathepsin F precursor [Bos taurus]
 gi|111304901|gb|AAI20004.1| Cathepsin F [Bos taurus]
 gi|296471599|tpg|DAA13714.1| TPA: cathepsin F [Bos taurus]
          Length = 460

 Score =  228 bits (582), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 140/324 (43%), Positives = 187/324 (57%), Gaps = 24/324 (7%)

Query: 43  EDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKF 101
           +D  +     F  F + +++TY +QEE  +R  VF  N+ RA++ Q LD  TA +GVTKF
Sbjct: 153 QDFSVKMASIFKDFVTTYNRTYDSQEEASWRMSVFANNMVRAQKIQALDRGTARYGVTKF 212

Query: 102 SDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPT-DFDWRDHGAVTGVKDQGACGS 160
           SDLT  EFR  +L  N  L+        P  P  D+P   +DWR+ GAVT VKDQG CGS
Sbjct: 213 SDLTEEEFRTIYL--NPLLKDAPGRNMRPAQPVTDVPPPQWDWRNKGAVTNVKDQGMCGS 270

Query: 161 CWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYI 220
           CW+FS TG +EG  FL  G L+SLSEQ+L+DCD           D  C GGL ++A+  I
Sbjct: 271 CWAFSVTGNVEGQWFLKRGTLLSLSEQELLDCDK---------TDKACLGGLPSNAYSAI 321

Query: 221 LKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGI 280
              GG+E E DY Y G    +C F   K    +++   +S +E ++AA L K+GP+++ I
Sbjct: 322 RTLGGLETEDDYSYRGR-LQTCSFSAEKAKVYINDSVELSKNEQKLAAWLAKNGPVSIAI 380

Query: 281 NAVWMQTYIGGVSCPY--ICGKYL-DHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENW 337
           NA  MQ Y  G+S P   +C  +L DH VL+VGYG+           P+W IKNSWG +W
Sbjct: 381 NAFGMQFYRHGISHPLRPLCSPWLIDHAVLLVGYGNRSAI-------PFWAIKNSWGTDW 433

Query: 338 GENGYYKICMGRNVCGVDSMVSSV 361
           GE GYY +  G   CGV+ M SS 
Sbjct: 434 GEEGYYYLHRGSGACGVNIMASSA 457


>gi|343470378|emb|CCD16903.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 445

 Score =  228 bits (582), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 129/313 (41%), Positives = 176/313 (56%), Gaps = 32/313 (10%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEF 109
           +  F+ FK K+S++Y    E  +RFR+FK ++ RAK     +P A  GVT+FSD++P EF
Sbjct: 38  QQQFAAFKQKYSRSYKDATEEAFRFRMFKQSMERAKEEAAANPYATFGVTQFSDMSPEEF 97

Query: 110 RRQFLGLNR----RLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFS 165
           R  +L   +     L+ P   +K   + T   P   DWR  GAVT VKDQG CGSCW+FS
Sbjct: 98  RATYLNGAKYYAAALKRP---RKVVNVSTGKAPPAIDWRKKGAVTPVKDQGKCGSCWAFS 154

Query: 166 ATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA-- 223
           A G +EG   ++  EL SLSEQ LV CD+          D GC GG ++ A ++I+ +  
Sbjct: 155 AIGNIEGQWKVAGHELTSLSEQMLVSCDN---------MDYGCRGGFLDRALKWIVSSNK 205

Query: 224 GGVEREKDYPYTGTDGGSCKFDKSK--IAAAVSNFSVISSDEDQMAANLVKHGPLAVGIN 281
           G V  E+ YPY  TDG     +KS   + A +S    +  DE+ +A  L K+GP+A+ ++
Sbjct: 206 GNVFTEESYPYDSTDGDVPPCNKSGKVVGAKISGLINLPKDENAIAEWLAKNGPIAIAVD 265

Query: 282 AVWMQTYIGGV--SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGE 339
           A     Y GGV  SC       L+HGVL+VGY  S        + PYWIIKNSWG+ WGE
Sbjct: 266 ASSFLDYTGGVLTSCS---SDALNHGVLLVGYDDS-------SKPPYWIIKNSWGKKWGE 315

Query: 340 NGYYKICMGRNVC 352
            GY ++  G N C
Sbjct: 316 EGYIRVEKGTNQC 328


>gi|395851695|ref|XP_003798388.1| PREDICTED: LOW QUALITY PROTEIN: cathepsin F [Otolemur garnettii]
          Length = 491

 Score =  228 bits (582), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 140/330 (42%), Positives = 192/330 (58%), Gaps = 24/330 (7%)

Query: 37  SDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAV 95
           + G  S+D  +     F  F + +++TY ++EE  +R  +F  N+ RA++ Q LD  TA 
Sbjct: 178 NKGPLSKDFSMQMLSVFKNFLTTYNRTYESKEETQWRLSIFINNMVRAQKIQALDQGTAR 237

Query: 96  HGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTND-LPTDFDWRDHGAVTGVKD 154
           +G+TKFSDLT  EFR  +L  N  LR     +     P  D  P ++DWR+ GAVT VK+
Sbjct: 238 YGITKFSDLTEEEFRTIYL--NPLLREDPGKKMRVAKPVGDPAPPEWDWRNKGAVTNVKN 295

Query: 155 QGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMN 214
           QG CGSCW+FS TG +EG  FL  G L+SLSEQ+L+DCD           D  C GGL +
Sbjct: 296 QGMCGSCWAFSVTGNVEGQWFLKQGTLLSLSEQELLDCDK---------MDKACLGGLPS 346

Query: 215 SAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHG 274
           +A+  I   GG+E E+DY Y G    +C F   K    +++   +S +E ++AA L K G
Sbjct: 347 NAYSAIKNLGGLETEEDYSYQG-QMQACNFSAEKAKVYINDSVELSHNEQKLAAWLAKKG 405

Query: 275 PLAVGINAVWMQTYIGGVSCPY--ICGKYL-DHGVLIVGYGSSGFAPIRFKEKPYWIIKN 331
           P++V INA  MQ Y  G+S P   +C  +L DH VLIVGYG+         + P+W IKN
Sbjct: 406 PISVAINAFGMQFYRHGISRPLRPLCTPWLIDHAVLIVGYGNR-------SDIPFWAIKN 458

Query: 332 SWGENWGENGYYKICMGRNVCGVDSMVSSV 361
           SWG +WGE GYY +  G   CGV++M SS 
Sbjct: 459 SWGTDWGEQGYYYLHRGSGACGVNTMASSA 488


>gi|146335578|gb|ABQ23398.1| cathepsin L isotype 1 [Trypanoplasma borreli]
          Length = 443

 Score =  228 bits (582), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 130/333 (39%), Positives = 185/333 (55%), Gaps = 56/333 (16%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           FS FK+  ++ Y +  E   RF +F AN+++A      +P A  G  +F+D++  EF+ +
Sbjct: 25  FSDFKATHARNYVSPGEERKRFEIFAANMKKAAELNRKNPMATFGPNEFADMSSEEFQTR 84

Query: 113 F-----------------LGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQ 155
                                 +     AD QK             DWR  GAVT VK+Q
Sbjct: 85  HNAARHYAAAKARRAKHTKSFTKEEIKAADGQK------------IDWRLKGAVTSVKNQ 132

Query: 156 GACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNS 215
           G+CGSCWSFS TG +EG + ++TG LVSLSEQ+LV CD         + D+GCNGGLM++
Sbjct: 133 GSCGSCWSFSTTGNIEGQNAIATGNLVSLSEQELVSCD---------TTDNGCNGGLMDN 183

Query: 216 AFEYIL--KAGGVEREKDYPYTGTDG--GSCKF--DKSKIAAAVSNFSVISSDEDQMAAN 269
           AF +++  + G +  E  YPY   +G   +C +  D   + A +SNF  I+  E+ MAA 
Sbjct: 184 AFGWLISTRGGQIATEASYPYVSGNGIVPACSYNLDNKPVGATISNFQDITGTEEDMAAF 243

Query: 270 LVKHGPLAVGINAVWMQTYIGGV--SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYW 327
           +  +GPL++G++A   Q+Y GG+   CP +    +DHGVLIVGY  +  AP      PYW
Sbjct: 244 VFNYGPLSIGVDASTWQSYAGGIITYCPDV---QIDHGVLIVGYDDT--AP-----TPYW 293

Query: 328 IIKNSWGENWGENGYYKICMGRNVCGVDSMVSS 360
           IIKNSW  NWGE+GY ++  G N+CG+ S  SS
Sbjct: 294 IIKNSWTANWGEDGYIRVAKGSNMCGLTSTPSS 326


>gi|3916212|gb|AAC78838.1| cathepsin F [Homo sapiens]
          Length = 338

 Score =  228 bits (582), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 140/323 (43%), Positives = 188/323 (58%), Gaps = 22/323 (6%)

Query: 42  SEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTK 100
           S+D  +     F  F   +++TY ++EE  +R  VF  N+ RA++ Q LD  TA +GVTK
Sbjct: 30  SQDLPVKMASIFKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTK 89

Query: 101 FSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGS 160
           FSDLT  EFR  +L    R + P +  K      +  P ++DWR  GAVT VKDQG CGS
Sbjct: 90  FSDLTEEEFRTIYLNTLLR-KEPGNKMKQAKSVGDLAPPEWDWRSKGAVTKVKDQGMCGS 148

Query: 161 CWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYI 220
           CW+FS TG +EG  FL+ G L+SLSEQ+L+DCD           D  C GGL ++A+  I
Sbjct: 149 CWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDK---------MDKACMGGLPSNAYSAI 199

Query: 221 LKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGI 280
              GG+E E DY Y G    SC F   K    +++   +S +E ++AA L K GP++V I
Sbjct: 200 KNLGGLETEDDYSYQG-HMQSCNFSAEKAKVYINDSVELSQNEQKLAAWLAKRGPISVAI 258

Query: 281 NAVWMQTYIGGVSCPY--ICGKYL-DHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENW 337
           NA  MQ Y  G+S P   +C  +L DH VL+VGYG+         + P+W IKNSWG +W
Sbjct: 259 NAFGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRS-------DVPFWAIKNSWGTDW 311

Query: 338 GENGYYKICMGRNVCGVDSMVSS 360
           GE GYY +  G   CGV++M SS
Sbjct: 312 GEKGYYYLHRGSGACGVNTMASS 334


>gi|260830531|ref|XP_002610214.1| hypothetical protein BRAFLDRAFT_216923 [Branchiostoma floridae]
 gi|229295578|gb|EEN66224.1| hypothetical protein BRAFLDRAFT_216923 [Branchiostoma floridae]
          Length = 274

 Score =  228 bits (582), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 130/296 (43%), Positives = 171/296 (57%), Gaps = 26/296 (8%)

Query: 73  RFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPI 131
           R+ VF+ NL++A+  Q  +  TA +GVTKF DLT  EFRR +L      + PA       
Sbjct: 1   RYFVFQDNLKKAETLQDSERGTAKYGVTKFMDLTEEEFRRYYL--TPVWKAPAKPLPPAT 58

Query: 132 LPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVD 191
           +P  D PT FDWRDHGAVT VKDQG CGSCW+FS TG +EG   +  G L  LSEQ    
Sbjct: 59  IPKKDAPTAFDWRDHGAVTEVKDQGQCGSCWAFSTTGNIEGQWAIKKGNLPDLSEQH--- 115

Query: 192 CDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAA 251
                    +   +S     ++      I    G+E EK YPY   D   C  D SK+  
Sbjct: 116 ---------TSKIESCHINPIVKRTKRSIDGKSGLESEKAYPYEAKD-EQCHMDYSKVQV 165

Query: 252 AVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPY--ICG-KYLDHGVLI 308
            +++   IS DE+ MA+ L ++GP+++GINA  MQ Y+GG+S P+   C  + LDHGVLI
Sbjct: 166 YINSSVNISKDENDMASWLAENGPISIGINAFPMQFYMGGISHPWRIFCNPEELDHGVLI 225

Query: 309 VGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAI 364
           VGYG+         E PYWIIKNSWG+NWGE GYY +  G  VCG+++M +S   +
Sbjct: 226 VGYGTK-------DETPYWIIKNSWGKNWGEEGYYLVYRGGGVCGLNTMCTSSVVL 274


>gi|357216861|gb|AET71138.1| cysteine peptidase isoform b [Sphenophorus levis]
          Length = 324

 Score =  228 bits (582), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 133/360 (36%), Positives = 189/360 (52%), Gaps = 51/360 (14%)

Query: 1   MERLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKF 60
           M+  IL+SLL++ +S+ L                +  DG            HF  FK K 
Sbjct: 1   MKSFILASLLVVAVSATL----------------LKEDGA-----------HFQSFKLKH 33

Query: 61  SKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH----GVTKFSDLTPSEFRRQFLGL 116
            KTY  Q E   RF +F+ NLR+ +         +H    G+ KF+D+T +EF+   L  
Sbjct: 34  GKTYKNQAEETKRFAIFRENLRKIEAHNAEYKQGIHSYTQGINKFADMTRAEFK-AMLAT 92

Query: 117 NRRLRLPADAQKAPILPTN-DLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHF 175
             + +    A K   L     +P   DWR    VT +KDQ  CGSCW+F+  G+ EGA+ 
Sbjct: 93  QVKTKPSIVATKTFQLADGVSVPESIDWRSRNVVTPIKDQAQCGSCWAFAVVGSTEGAYA 152

Query: 176 LSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYT 235
           LSTG+L   SEQQLVDC        +   + GC+GG ++  F YI +  G+E E DYPYT
Sbjct: 153 LSTGKLTRFSEQQLVDC--------TTDLNYGCDGGYLDDTFPYI-QTNGLELESDYPYT 203

Query: 236 GTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCP 295
           G D G C ++ SK+   VS++  + ++E  +   +   GP+A+ INA  +Q Y  G+   
Sbjct: 204 GYD-GYCSYESSKVVTKVSSYVSVPANEQALLEAVGTAGPVAIAINADDLQFYFSGIIDD 262

Query: 296 YICG-KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGV 354
             C  +YLDHGVL VGY S          + YW+IKNSWG +WGE+GY++   G+N+CGV
Sbjct: 263 KYCDPEYLDHGVLAVGYDSE-------NGRDYWLIKNSWGADWGESGYFRFLRGQNICGV 315


>gi|426252094|ref|XP_004019753.1| PREDICTED: cathepsin F isoform 1 [Ovis aries]
          Length = 460

 Score =  228 bits (582), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 143/331 (43%), Positives = 186/331 (56%), Gaps = 38/331 (11%)

Query: 43  EDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKF 101
           +D  +     F  F + +++TY +QEE  +R  VF  N+ RA++ Q LD  TA +GVTKF
Sbjct: 153 QDFSVKMASIFKDFVTTYNRTYDSQEEASWRMSVFANNMVRAQKIQALDRGTAQYGVTKF 212

Query: 102 SDLTPSEFRRQFL--------GLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVK 153
           SDLT  EFR  +L        G N RL  P          T+  P  +DWR+ GAVT VK
Sbjct: 213 SDLTEEEFRTIYLNPLLKDAPGRNMRLAQPV---------TDVPPPQWDWRNKGAVTDVK 263

Query: 154 DQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLM 213
           DQG CGSCW+FS TG +EG  FL  G L+SLSEQ+L+DCD           D  C GGL 
Sbjct: 264 DQGMCGSCWAFSVTGNVEGQWFLKRGTLLSLSEQELLDCDK---------TDKACLGGLP 314

Query: 214 NSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKH 273
           ++A+  I   GG+E E DY Y G    +C F   K    +++   +S +E ++AA L K 
Sbjct: 315 SNAYSAIRTLGGLETEDDYSYRG-HLQTCSFSAEKAKVYINDSVELSKNEQKLAAWLAKK 373

Query: 274 GPLAVGINAVWMQTYIGGVSCPY--ICGKYL-DHGVLIVGYGSSGFAPIRFKEKPYWIIK 330
           GP++V INA  MQ Y  G+S P   +C  +L DH VL+VGYG+           P+W IK
Sbjct: 374 GPISVAINAFGMQFYRHGISHPLRPLCSPWLIDHAVLLVGYGNRS-------ATPFWAIK 426

Query: 331 NSWGENWGENGYYKICMGRNVCGVDSMVSSV 361
           NSWG NWGE GYY +  G   CGV+ M SS 
Sbjct: 427 NSWGTNWGEEGYYYLHRGSGACGVNIMASSA 457


>gi|54696066|gb|AAV38405.1| cathepsin F [synthetic construct]
          Length = 485

 Score =  228 bits (582), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 140/323 (43%), Positives = 188/323 (58%), Gaps = 22/323 (6%)

Query: 42  SEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTK 100
           S+D  +     F  F   +++TY ++EE  +R  VF  N+ RA++ Q LD  TA +GVTK
Sbjct: 176 SQDLPVKMASIFKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTK 235

Query: 101 FSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGS 160
           FSDLT  EFR  +L    R + P +  K      +  P ++DWR  GAVT VKDQG CGS
Sbjct: 236 FSDLTEEEFRTIYLNTLLR-KEPGNKMKQAKSVGDLAPPEWDWRSKGAVTKVKDQGMCGS 294

Query: 161 CWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYI 220
           CW+FS TG +EG  FL+ G L+SLSEQ+L+DCD           D  C GGL ++A+  I
Sbjct: 295 CWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDK---------MDKACMGGLPSNAYSAI 345

Query: 221 LKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGI 280
              GG+E E DY Y G    SC F   K    +++   +S +E ++AA L K GP++V I
Sbjct: 346 KNLGGLETEDDYSYQG-HMQSCNFSAEKAKVYINDSMELSQNEQKLAAWLAKRGPISVAI 404

Query: 281 NAVWMQTYIGGVSCPY--ICGKYL-DHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENW 337
           NA  MQ Y  G+S P   +C  +L DH VL+VGYG+         + P+W IKNSWG +W
Sbjct: 405 NAFGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNR-------SDVPFWAIKNSWGTDW 457

Query: 338 GENGYYKICMGRNVCGVDSMVSS 360
           GE GYY +  G   CGV++M SS
Sbjct: 458 GEKGYYYLHRGSGACGVNTMASS 480


>gi|426252096|ref|XP_004019754.1| PREDICTED: cathepsin F isoform 2 [Ovis aries]
          Length = 477

 Score =  228 bits (582), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 143/331 (43%), Positives = 186/331 (56%), Gaps = 38/331 (11%)

Query: 43  EDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKF 101
           +D  +     F  F + +++TY +QEE  +R  VF  N+ RA++ Q LD  TA +GVTKF
Sbjct: 170 QDFSVKMASIFKDFVTTYNRTYDSQEEASWRMSVFANNMVRAQKIQALDRGTAQYGVTKF 229

Query: 102 SDLTPSEFRRQFL--------GLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVK 153
           SDLT  EFR  +L        G N RL  P          T+  P  +DWR+ GAVT VK
Sbjct: 230 SDLTEEEFRTIYLNPLLKDAPGRNMRLAQPV---------TDVPPPQWDWRNKGAVTDVK 280

Query: 154 DQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLM 213
           DQG CGSCW+FS TG +EG  FL  G L+SLSEQ+L+DCD           D  C GGL 
Sbjct: 281 DQGMCGSCWAFSVTGNVEGQWFLKRGTLLSLSEQELLDCDK---------TDKACLGGLP 331

Query: 214 NSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKH 273
           ++A+  I   GG+E E DY Y G    +C F   K    +++   +S +E ++AA L K 
Sbjct: 332 SNAYSAIRTLGGLETEDDYSYRG-HLQTCSFSAEKAKVYINDSVELSKNEQKLAAWLAKK 390

Query: 274 GPLAVGINAVWMQTYIGGVSCPY--ICGKYL-DHGVLIVGYGSSGFAPIRFKEKPYWIIK 330
           GP++V INA  MQ Y  G+S P   +C  +L DH VL+VGYG+           P+W IK
Sbjct: 391 GPISVAINAFGMQFYRHGISHPLRPLCSPWLIDHAVLLVGYGNRS-------ATPFWAIK 443

Query: 331 NSWGENWGENGYYKICMGRNVCGVDSMVSSV 361
           NSWG NWGE GYY +  G   CGV+ M SS 
Sbjct: 444 NSWGTNWGEEGYYYLHRGSGACGVNIMASSA 474


>gi|119594953|gb|EAW74547.1| cathepsin F, isoform CRA_a [Homo sapiens]
 gi|119594954|gb|EAW74548.1| cathepsin F, isoform CRA_a [Homo sapiens]
          Length = 392

 Score =  228 bits (582), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 140/323 (43%), Positives = 188/323 (58%), Gaps = 22/323 (6%)

Query: 42  SEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTK 100
           S+D  +     F  F   +++TY ++EE  +R  VF  N+ RA++ Q LD  TA +GVTK
Sbjct: 84  SQDLPVKMASIFKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTK 143

Query: 101 FSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGS 160
           FSDLT  EFR  +L    R + P +  K      +  P ++DWR  GAVT VKDQG CGS
Sbjct: 144 FSDLTEEEFRTIYLNTLLR-KEPGNKMKQAKSVGDLAPPEWDWRSKGAVTKVKDQGMCGS 202

Query: 161 CWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYI 220
           CW+FS TG +EG  FL+ G L+SLSEQ+L+DCD           D  C GGL ++A+  I
Sbjct: 203 CWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDK---------MDKACMGGLPSNAYSAI 253

Query: 221 LKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGI 280
              GG+E E DY Y G    SC F   K    +++   +S +E ++AA L K GP++V I
Sbjct: 254 KNLGGLETEDDYSYQG-HMQSCNFSAEKAKVYINDSVELSQNEQKLAAWLAKRGPISVAI 312

Query: 281 NAVWMQTYIGGVSCPY--ICGKYL-DHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENW 337
           NA  MQ Y  G+S P   +C  +L DH VL+VGYG+         + P+W IKNSWG +W
Sbjct: 313 NAFGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRS-------DVPFWAIKNSWGTDW 365

Query: 338 GENGYYKICMGRNVCGVDSMVSS 360
           GE GYY +  G   CGV++M SS
Sbjct: 366 GEKGYYYLHRGSGACGVNTMASS 388


>gi|408009|gb|AAA18215.1| cysteine protease precursor [Trypanosoma congolense]
          Length = 444

 Score =  228 bits (581), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 128/312 (41%), Positives = 174/312 (55%), Gaps = 27/312 (8%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEF 109
           +  F+ FK K+S++Y    E  +RFRVFK N+ RAK     +P A  GVT+FSD++P EF
Sbjct: 38  QQQFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSPEEF 97

Query: 110 RRQFL-GLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATG 168
           R  +  G           +K   + T   P   DWR  GAVT VKDQG CGSCW+FSA G
Sbjct: 98  RATYHNGAEYYAAALKRPRKVVNVSTGKAPEAVDWRKKGAVTPVKDQGQCGSCWAFSAIG 157

Query: 169 ALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA--GGV 226
            +EG   ++  EL SLSEQ LV CD           D GC GGLM+ AF++I+ +  G V
Sbjct: 158 NIEGQWKVAGHELTSLSEQMLVSCDTN---------DFGCEGGLMDDAFKWIVSSNKGNV 208

Query: 227 EREKDYPYTGTDGGSCKFDKSK--IAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW 284
             E+ YPY    G     DKS   + A + +   +  DE+ +A  L K+GP+A+ ++A  
Sbjct: 209 FTEQSYPYASGGGNVPTCDKSGKVVGAKIRDHVDLPEDENAIAEWLAKNGPVAIAVDATS 268

Query: 285 MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYK 344
            Q+Y GGV    I  ++LDHGVL+VGY  +        + PYWIIKNSW + WGE GY  
Sbjct: 269 FQSYTGGVLTSCI-SEHLDHGVLLVGYDDT-------SKPPYWIIKNSWSKGWGEEGYSA 320

Query: 345 I-----CMGRNV 351
           +     C+ +N+
Sbjct: 321 LRRHNQCLMKNL 332


>gi|6042196|ref|NP_003784.2| cathepsin F precursor [Homo sapiens]
 gi|12643325|sp|Q9UBX1.1|CATF_HUMAN RecName: Full=Cathepsin F; Short=CATSF; Flags: Precursor
 gi|4731642|gb|AAD26616.2|AF088886_1 cathepsin F precursor [Homo sapiens]
 gi|5305722|gb|AAD41790.1|AF132894_1 cathepsin F [Homo sapiens]
 gi|4826528|emb|CAB42883.1| cysteine proteinase [Homo sapiens]
 gi|15079738|gb|AAH11682.1| Cathepsin F [Homo sapiens]
 gi|22209085|gb|AAH36451.1| Cathepsin F [Homo sapiens]
 gi|61363874|gb|AAX42458.1| cathepsin F [synthetic construct]
 gi|123993139|gb|ABM84171.1| cathepsin F [synthetic construct]
 gi|189053904|dbj|BAG36411.1| unnamed protein product [Homo sapiens]
          Length = 484

 Score =  228 bits (581), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 140/323 (43%), Positives = 188/323 (58%), Gaps = 22/323 (6%)

Query: 42  SEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTK 100
           S+D  +     F  F   +++TY ++EE  +R  VF  N+ RA++ Q LD  TA +GVTK
Sbjct: 176 SQDLPVKMASIFKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTK 235

Query: 101 FSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGS 160
           FSDLT  EFR  +L    R + P +  K      +  P ++DWR  GAVT VKDQG CGS
Sbjct: 236 FSDLTEEEFRTIYLNTLLR-KEPGNKMKQAKSVGDLAPPEWDWRSKGAVTKVKDQGMCGS 294

Query: 161 CWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYI 220
           CW+FS TG +EG  FL+ G L+SLSEQ+L+DCD           D  C GGL ++A+  I
Sbjct: 295 CWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDK---------MDKACMGGLPSNAYSAI 345

Query: 221 LKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGI 280
              GG+E E DY Y G    SC F   K    +++   +S +E ++AA L K GP++V I
Sbjct: 346 KNLGGLETEDDYSYQG-HMQSCNFSAEKAKVYINDSVELSQNEQKLAAWLAKRGPISVAI 404

Query: 281 NAVWMQTYIGGVSCPY--ICGKYL-DHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENW 337
           NA  MQ Y  G+S P   +C  +L DH VL+VGYG+         + P+W IKNSWG +W
Sbjct: 405 NAFGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNR-------SDVPFWAIKNSWGTDW 457

Query: 338 GENGYYKICMGRNVCGVDSMVSS 360
           GE GYY +  G   CGV++M SS
Sbjct: 458 GEKGYYYLHRGSGACGVNTMASS 480


>gi|343477619|emb|CCD11596.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 445

 Score =  228 bits (581), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 129/313 (41%), Positives = 175/313 (55%), Gaps = 32/313 (10%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEF 109
           +  F+ FK K+S++Y    E  +RFR+FK ++ RAK     +P A  GVT+FSD++P EF
Sbjct: 38  QQQFAAFKQKYSRSYKDATEEAFRFRMFKQSMERAKEEAAANPYATFGVTQFSDMSPEEF 97

Query: 110 RRQFLGLNR----RLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFS 165
           R  +L   +     L+ P   +K   + T   P   DWR  GAVT VKDQ  CGSCW+FS
Sbjct: 98  RATYLNGAKYYAAALKRP---RKVVTVSTGKAPPAIDWRKKGAVTPVKDQRKCGSCWAFS 154

Query: 166 ATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA-- 223
           A G +EG   ++  EL SLSEQ LV CD+          D GC GGLM+ A ++I+ +  
Sbjct: 155 AIGNIEGQWKVAGHELTSLSEQMLVSCDN---------MDDGCQGGLMDRALKWIVSSNK 205

Query: 224 GGVEREKDYPYTGTDGGSCKFDKSK--IAAAVSNFSVISSDEDQMAANLVKHGPLAVGIN 281
           G V  E+ YPY  TDG     +KS   + A +S    +  DE+ +A  L K+GP+A+ ++
Sbjct: 206 GNVFTEESYPYDSTDGDVPPCNKSGKVVGAKISGLINLPKDENAIAEWLAKNGPIAIAVD 265

Query: 282 AVWMQTYIGGV--SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGE 339
           A     Y GGV  SC       L+H VL+VGY  S        + PYWIIKNSWG+ WGE
Sbjct: 266 ASSFLDYTGGVLTSCS---SDALNHDVLLVGYDDSS-------KPPYWIIKNSWGKKWGE 315

Query: 340 NGYYKICMGRNVC 352
            GY ++  G N C
Sbjct: 316 EGYIRVEKGTNQC 328


>gi|30575716|gb|AAP33050.1| cysteine proteinase 3 [Clonorchis sinensis]
 gi|358339353|dbj|GAA47433.1| cathepsin F [Clonorchis sinensis]
          Length = 327

 Score =  228 bits (580), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 132/317 (41%), Positives = 189/317 (59%), Gaps = 23/317 (7%)

Query: 48  NAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTP 106
           NA   +  FK K+ K+Y+  ++ +YRFRVFK NL R K+ Q ++  TA +GVT+FSDLT 
Sbjct: 26  NARQLYEEFKLKYKKSYSN-DDDEYRFRVFKDNLLRIKQFQNMERGTAKYGVTQFSDLTA 84

Query: 107 SEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSA 166
            EF+ ++L  ++   +P D +  P +  +    +FDWR+HGAV  V DQG CGSCW+FSA
Sbjct: 85  QEFKVRYL-RSKFGGVPVDREPVPFIRMDVDDDNFDWRNHGAVGPVLDQGDCGSCWAFSA 143

Query: 167 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGV 226
            G +EG  F  T  L+ LSEQQL+DCD           D GCNGG    AF+ IL  GG+
Sbjct: 144 VGNIEGQWFRKTDNLLQLSEQQLLDCDE---------VDEGCNGGTPQQAFKQILGMGGL 194

Query: 227 EREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQ 286
           + + DYPY G + G C+   SK+   ++   ++  DE   A  L + GPL+  +NA+++Q
Sbjct: 195 QLDSDYPYEGRE-GQCRMVPSKVKVYINGSKILPEDEQIQAQMLKETGPLSSALNALFLQ 253

Query: 287 TYIGGV--SCPYIC-GKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYY 343
            Y  G+    P +C  + L+H VL VGYG  G         PYW +KNSW   +GENGY+
Sbjct: 254 FYTEGILHPLPALCDAQSLNHAVLTVGYGKEG-------RLPYWTVKNSWSTMFGENGYF 306

Query: 344 KICMGRNVCGVDSMVSS 360
           +I  G   CG++++VS+
Sbjct: 307 RIYRGDGTCGINTLVST 323


>gi|118429521|gb|ABK91808.1| cysteine proteinase prozyme precursor [Clonorchis sinensis]
          Length = 316

 Score =  227 bits (579), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 132/317 (41%), Positives = 189/317 (59%), Gaps = 23/317 (7%)

Query: 48  NAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTP 106
           NA   +  FK K+ K+Y+  ++ +YRFRVFK NL R K+ Q ++  TA +GVT+FSDLT 
Sbjct: 15  NARQLYEEFKLKYKKSYSN-DDDEYRFRVFKDNLLRIKQFQNMERGTAKYGVTQFSDLTA 73

Query: 107 SEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSA 166
            EF+ ++L  ++   +P D +  P +  +    +FDWR+HGAV  V DQG CGSCW+FSA
Sbjct: 74  QEFKVRYL-RSKFGGVPVDREPVPFIRMDVDDDNFDWRNHGAVGPVLDQGDCGSCWAFSA 132

Query: 167 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGV 226
            G +EG  F  T  L+ LSEQQL+DCD           D GCNGG    AF+ IL  GG+
Sbjct: 133 VGNIEGQWFRKTDNLLQLSEQQLLDCDE---------VDEGCNGGTPQQAFKQILGMGGL 183

Query: 227 EREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQ 286
           + + DYPY G + G C+   SK+   ++   ++  DE   A  L + GPL+  +NA+++Q
Sbjct: 184 QLDSDYPYEGRE-GQCRMVPSKVKVYINGSKILPEDEQIQAQMLKETGPLSSALNALFLQ 242

Query: 287 TYIGGV--SCPYIC-GKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYY 343
            Y  G+    P +C  + L+H VL VGYG  G         PYW +KNSW   +GENGY+
Sbjct: 243 FYTEGILHPLPALCDAQSLNHAVLTVGYGKEG-------RLPYWTVKNSWSTMFGENGYF 295

Query: 344 KICMGRNVCGVDSMVSS 360
           +I  G   CG++++VS+
Sbjct: 296 RIYRGDGTCGINTLVST 312


>gi|91992514|gb|ABE72973.1| cathepsin L [Aedes aegypti]
          Length = 265

 Score =  227 bits (579), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 121/275 (44%), Positives = 164/275 (59%), Gaps = 25/275 (9%)

Query: 96  HGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQ-------KAPILPTNDLPTDFDWRDHGA 148
           +G+T F+D+T +E+R++       L +P D         KA I    +LP  FDWR+ GA
Sbjct: 2   YGITHFADMTSAEYRQR-----TGLVIPRDEDRNHVGNPKAEIDENMELPESFDWRELGA 56

Query: 149 VTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGC 208
           V+ VK+QG CGSCW+FS  G +EG H + T  L   SEQ+L+DCD         + DS C
Sbjct: 57  VSPVKNQGNCGSCWAFSVVGNIEGLHQIKTKVLEEYSEQELLDCD---------AVDSAC 107

Query: 209 NGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAA 268
            GG M+ A++ I K GG+E E +YPY      +C F+ +++   V     +  +E  MA 
Sbjct: 108 QGGYMDDAYKAIEKIGGLELESEYPYLAKKQKTCHFNSTEVHVRVKGAVDLPKNETAMAQ 167

Query: 269 NLVKHGPLAVGINAVWMQTYIGGVSCPY--ICGKY-LDHGVLIVGYGSSGFAPIRFKEKP 325
            LV +GP+++G+NA  MQ Y GG+S P+  +C K  LDHGVLIVGYG   + P+  K  P
Sbjct: 168 YLVANGPISIGLNANAMQFYRGGISHPWKPLCSKKNLDHGVLIVGYGVKEY-PMFNKTMP 226

Query: 326 YWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSS 360
           YWI+KNSWG  WGE GYY+I  G N CGV  M SS
Sbjct: 227 YWIVKNSWGPKWGEQGYYRIFRGDNTCGVSEMASS 261


>gi|358339354|dbj|GAA47434.1| cathepsin F [Clonorchis sinensis]
          Length = 603

 Score =  227 bits (579), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 131/323 (40%), Positives = 179/323 (55%), Gaps = 31/323 (9%)

Query: 48  NAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTP 106
           NA   +  FK K+ KTY   ++ +YRF VFK NL RA + Q ++  TA +GVT+F DLT 
Sbjct: 302 NARQLYEEFKQKYKKTYVNDDD-EYRFSVFKENLLRAHQLQTMEQGTAEYGVTQFFDLTS 360

Query: 107 SEFRRQFLGLNRRLRLPADAQKAPIL-PTNDLPTD---FDWRDHGAVTGVKDQGACGSCW 162
            EF+ Q+LG         D Q    + P+  +  D   FDWRDHGAV  V DQG CGSCW
Sbjct: 361 QEFQIQYLGFKYE-----DMQDTEEMSPSTRVVMDEDSFDWRDHGAVGPVLDQGKCGSCW 415

Query: 163 SFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK 222
           +FS  G +EG  FL TGEL+SLSEQQL+DCD         + D GCNGG     +  ++K
Sbjct: 416 AFSTIGNIEGQWFLKTGELLSLSEQQLIDCD---------NVDEGCNGGYPPKTYGAVIK 466

Query: 223 AGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA 282
            GG+E   DYPY       C  D+ K+   +++  V   +E   A  L   GPL+  +NA
Sbjct: 467 MGGLELNSDYPYKAL-AEKCHMDRQKLKVYINDSVVFPRNEHLQAEALKLMGPLSSALNA 525

Query: 283 VWMQTYIGGVSCPYICG---KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGE 339
             ++ Y  G+    +     + L+H VL VGYG+           PYW +KNSWG  +GE
Sbjct: 526 NPLKFYKTGIMHLPVASCFPRALNHAVLTVGYGTE-------NGLPYWTVKNSWGTAFGE 578

Query: 340 NGYYKICMGRNVCGVDSMVSSVA 362
           +GY++I  G   CG++ +VS+ A
Sbjct: 579 DGYFRIYRGGGTCGINRLVSTAA 601



 Score =  155 bits (393), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 91/205 (44%), Positives = 116/205 (56%), Gaps = 22/205 (10%)

Query: 140 DFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPE 199
           +FDWR HGAV  V +QG CGSCW+FSA G +EG  FL +GEL+ LS QQ++DCDH     
Sbjct: 42  NFDWRQHGAVGPVWNQGPCGSCWAFSAVGNIEGQWFLKSGELLHLSVQQVLDCDH----- 96

Query: 200 ESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVI 259
                D GCNGG     +  + + GG++ + DY Y     G C  D+SK  A V N SVI
Sbjct: 97  ----VDHGCNGGYPPQVYRQVNQMGGLQLDADYSYKAAV-GKCHTDRSKFRAYV-NSSVI 150

Query: 260 SSDEDQMAANLVKH-GPLAVGINAVWMQTYIGGV--SCPYICGK-YLDHGVLIVGYGSSG 315
            S  +Q  AN +K  GPLA  +NA  +Q Y  G+    P  C    L+H VL VGYG+  
Sbjct: 151 LSQNEQFQANKLKTIGPLASTLNARTLQFYRKGIMHPTPSACNPGQLNHAVLTVGYGTE- 209

Query: 316 FAPIRFKEKPYWIIKNSWGENWGEN 340
                 +  PYWI+KNSW   +GE 
Sbjct: 210 ------QGMPYWIVKNSWSRGFGEQ 228


>gi|71666430|ref|XP_820174.1| cysteine peptidase [Trypanosoma cruzi strain CL Brener]
 gi|70885508|gb|EAN98323.1| cysteine peptidase, putative [Trypanosoma cruzi]
          Length = 467

 Score =  227 bits (578), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 139/368 (37%), Positives = 186/368 (50%), Gaps = 53/368 (14%)

Query: 4   LILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKT 63
           L L+++L+++   V A+  +++ ++ +  Q                   F+ FK K  + 
Sbjct: 8   LSLAAVLVVMACLVPAATASLHAEETLASQ-------------------FAEFKQKHGRV 48

Query: 64  YATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ-------FLGL 116
           Y +  E  +R  VF+ NL  A+     +P A  GVT FSDLT  EFR +       F   
Sbjct: 49  YESAAEEAFRLSVFRENLFLARLHAAANPHATFGVTPFSDLTREEFRSRYHNGAAHFAAA 108

Query: 117 NRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFL 176
             R R+P + +          P   DWR  GAVT VKDQG CGSCW+FSA G +E   FL
Sbjct: 109 QERARVPVNVEVV------GAPAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFL 162

Query: 177 STGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA--GGVEREKDYPY 234
           +   L +LSEQ LV CD           DSGC GGLMN+AFE+I++   G V  E  YPY
Sbjct: 163 AGHPLTNLSEQMLVSCDKT---------DSGCGGGLMNNAFEWIVQENNGAVYTEDSYPY 213

Query: 235 TGTDGGS--CKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGV 292
              +G S  C      + A ++    +  DE Q+AA L  +GP+AV ++A    TY GGV
Sbjct: 214 ASGEGISPPCTTSGHTVGATITGHVELPQDEAQIAAWLAVNGPVAVAVDASSWMTYTGGV 273

Query: 293 SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVC 352
               +  + LDHGVL+VGY  S          PYWIIKNSW   WGE+GY +I  G N C
Sbjct: 274 MTSCV-SEQLDHGVLLVGYNDSAAV-------PYWIIKNSWTAQWGEDGYIRIAKGSNQC 325

Query: 353 GVDSMVSS 360
            V    SS
Sbjct: 326 LVKEEASS 333


>gi|116242322|gb|ABJ89818.1| cysteine proteinase 3 [Clonorchis sinensis]
          Length = 327

 Score =  227 bits (578), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 132/317 (41%), Positives = 189/317 (59%), Gaps = 23/317 (7%)

Query: 48  NAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTP 106
           NA   +  FK K+ K+Y+  ++ +YRFRVFK NL R K+ Q ++  TA +GVT+FSDLT 
Sbjct: 26  NARQLYEEFKLKYKKSYSN-DDDEYRFRVFKDNLLRIKQFQNMERGTAKYGVTQFSDLTA 84

Query: 107 SEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSA 166
            EF+ ++L  ++   +P D +  P +  +    +FDWR+HGAV  V DQG CGSCW+FSA
Sbjct: 85  QEFKVRYL-RSKFGGVPVDREPVPFIRMDVDDDNFDWRNHGAVGPVLDQGDCGSCWAFSA 143

Query: 167 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGV 226
            G +EG  F  T  L+ LSEQQL+DCD           D GCNGG    AF+ IL  GG+
Sbjct: 144 VGNIEGQWFRKTDNLLQLSEQQLLDCD---------GVDEGCNGGTPQQAFKQILGMGGL 194

Query: 227 EREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQ 286
           + + DYPY G + G C+   SK+   ++   ++  DE   A  L + GPL+  +NA+++Q
Sbjct: 195 QLDSDYPYEGRE-GQCRMVPSKVKVYINGSKILPEDEQIQAQMLKETGPLSSALNALFLQ 253

Query: 287 TYIGGV--SCPYIC-GKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYY 343
            Y  G+    P +C  + L+H VL VGYG  G         PYW +KNSW   +GENGY+
Sbjct: 254 FYTEGILHPLPALCDAQSLNHAVLTVGYGKEG-------RLPYWTVKNSWSTMFGENGYF 306

Query: 344 KICMGRNVCGVDSMVSS 360
           +I  G   CG++++VS+
Sbjct: 307 RIYRGDGTCGINTLVST 323


>gi|410045434|ref|XP_003313198.2| PREDICTED: LOW QUALITY PROTEIN: cathepsin F [Pan troglodytes]
          Length = 548

 Score =  227 bits (578), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 141/322 (43%), Positives = 187/322 (58%), Gaps = 24/322 (7%)

Query: 43  EDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKF 101
           +D  +     F  F   +++TY ++EE  +R  VF  N+ RA++ Q LD  TA +GVTKF
Sbjct: 241 QDLPVKMASIFKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKF 300

Query: 102 SDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDL-PTDFDWRDHGAVTGVKDQGACGS 160
           SDLT  EFR  +L  N  LR     +        DL P ++DWR  GAVT VKDQG CGS
Sbjct: 301 SDLTEEEFRTIYL--NPLLRKEPGNKMKQAKSVGDLAPPEWDWRSKGAVTKVKDQGMCGS 358

Query: 161 CWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYI 220
           CW+FS TG +EG  FL+ G L+SLSEQ+L+DCD           D  C GGL ++A+  I
Sbjct: 359 CWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDK---------MDKACMGGLPSNAYSAI 409

Query: 221 LKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGI 280
              GG+E E DY Y G    SC F   K    +++  V+S +E ++AA L K GP++V I
Sbjct: 410 KNLGGLETEDDYSYQG-HMQSCNFSAEKAKVYINDSVVLSQNEQKLAAWLAKRGPISVAI 468

Query: 281 NAVWMQTYIGGVSCPY--ICGKYL-DHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENW 337
           NA  MQ Y  G+S P   +C  +L DH VL+VGYG+         + P+W IKNSWG +W
Sbjct: 469 NAFGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNR-------SDVPFWAIKNSWGTDW 521

Query: 338 GENGYYKICMGRNVCGVDSMVS 359
           GE GYY +  G   CGV++M S
Sbjct: 522 GEKGYYYLHCGSEACGVNTMAS 543


>gi|14041143|emb|CAA71554.1| cathepsin [Geodia cydonium]
          Length = 322

 Score =  227 bits (578), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 134/312 (42%), Positives = 179/312 (57%), Gaps = 26/312 (8%)

Query: 56  FKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLG 115
           +K K++K Y++QEE   R RV+ +NL+  +            + +F+DL P EF   + G
Sbjct: 22  WKLKYNKQYSSQEEDYLRQRVWLSNLKFVEEFDSEREGYTVAMNEFADLDPREFVSHYNG 81

Query: 116 LNRRLRLPADAQKAPILPTND---LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEG 172
           L RR   P  +   P     D   LPT  DWR  G VTGVK+QG CGSCW+FSATG+LEG
Sbjct: 82  LRRR---PHTSSGEPCTLGEDVSALPTTVDWRTKGYVTGVKNQGQCGSCWAFSATGSLEG 138

Query: 173 AHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDY 232
            HF +TG+LVSLSEQ LVDC        S   + GCNGGL + AF+Y++K GG++ E  Y
Sbjct: 139 QHFNATGKLVSLSEQNLVDC-------SSAEGNEGCNGGLPDDAFKYVIKNGGIDTEASY 191

Query: 233 PYTGTDGGSCKFDKSKIAAAVSNFSVISS-DEDQMAANLVKHGPLAVGINA--VWMQTYI 289
           PY   D   C +  + I +  S++  I S  E Q+       GP+ VGI+A  +  Q Y 
Sbjct: 192 PYVARD-EKCHYSSANIGSTCSSYVDIESKSEAQLQVASATVGPIPVGIDASHLGFQLYD 250

Query: 290 GGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMG 348
           GGV    +C +  LDHGVL+VGYG        +KEK YW++KNSWG NWG +G   +   
Sbjct: 251 GGVYHSDLCSQTRLDHGVLVVGYGV-------YKEKDYWMVKNSWGTNWGISGDMMMSRN 303

Query: 349 R-NVCGVDSMVS 359
           R N CG+ +M S
Sbjct: 304 RDNNCGIATMAS 315


>gi|358339045|dbj|GAA32724.2| cathepsin F, partial [Clonorchis sinensis]
          Length = 271

 Score =  227 bits (578), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 128/288 (44%), Positives = 171/288 (59%), Gaps = 28/288 (9%)

Query: 80  NLRRAKRRQLLDP-TAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLP 138
            L  AKR Q ++  TA +GVT+FSDLT  EF+ ++L    R+R         + P  D+ 
Sbjct: 1   QLAAAKRLQEMEQGTAQYGVTQFSDLTSEEFKTRYL----RMRFDGPIVSEDLTPEEDVT 56

Query: 139 TD---FDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHE 195
            D   FDWR+HGAV  V DQG CGSCW+FS  G +EG  F  TG+L++LSEQQLVDCDH 
Sbjct: 57  MDNEKFDWREHGAVGPVLDQGKCGSCWAFSVIGNVEGQWFRKTGDLLALSEQQLVDCDH- 115

Query: 196 CDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSN 255
                    D GCNGG     +  I K GG+E   DYPYTG D G C  ++SK  A V++
Sbjct: 116 --------LDKGCNGGYPPKTYGEIEKMGGLELASDYPYTGVD-GICYMNQSKFVAYVND 166

Query: 256 FSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGV--SCPYICGKY-LDHGVLIVGYG 312
            +V+   E   A  L + GPL+  +NAV +Q Y+GG+    P++C  + L+H VL VGYG
Sbjct: 167 STVLPLSEKIQAQKLKEIGPLSSALNAVLLQFYLGGIIFPIPFLCNPHGLNHAVLTVGYG 226

Query: 313 SSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSS 360
           +  F        PYWI+KNSWG  +GE GY++I  G   CG++ +VS+
Sbjct: 227 TE-FG------IPYWIVKNSWGVGFGEKGYFRIFRGAGTCGINLVVST 267


>gi|1136308|gb|AAB41119.1| cruzipain [Trypanosoma cruzi]
          Length = 467

 Score =  226 bits (577), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 138/368 (37%), Positives = 186/368 (50%), Gaps = 53/368 (14%)

Query: 4   LILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKT 63
           L L+++L+++   V A+  +++ ++ +  Q                   F+ FK K  + 
Sbjct: 8   LSLAAVLVVMACLVPAATASLHAEETLASQ-------------------FAEFKQKHGRV 48

Query: 64  YATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ-------FLGL 116
           Y +  E  +R  VF+ NL  A+     +P A  GVT FSDLT  EFR +       F   
Sbjct: 49  YGSAAEEAFRLSVFRENLFLARLHAAANPHATFGVTAFSDLTREEFRSRYHNGAAHFAAA 108

Query: 117 NRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFL 176
             R R+P + +          P   DWR  GAVT VKDQG CGSCW+FSA G +E   FL
Sbjct: 109 QERARVPVNVEVV------GAPAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFL 162

Query: 177 STGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA--GGVEREKDYPY 234
           +   L +LSEQ LV CD           DSGC GGLMN+AFE+I++   G V  E  YPY
Sbjct: 163 AGHPLTNLSEQMLVSCDKT---------DSGCGGGLMNNAFEWIVQENNGAVYTEDSYPY 213

Query: 235 TGTDGGS--CKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGV 292
              +G S  C      + A ++    +  DE Q+AA L  +GP+AV ++A    TY GGV
Sbjct: 214 ASGEGISPPCTTSGHTVGATITGHVELPQDEAQIAAWLAVNGPVAVAVDASSWMTYTGGV 273

Query: 293 SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVC 352
               +  + LDHGVL+VGY  S          PYW+IKNSW   WGE+GY +I  G N C
Sbjct: 274 MTSCV-SEQLDHGVLLVGYNDSAAV-------PYWVIKNSWTTQWGEDGYIRIAKGSNQC 325

Query: 353 GVDSMVSS 360
            V    SS
Sbjct: 326 LVKEEASS 333


>gi|3916214|gb|AAC78839.1| cathepsin F [Homo sapiens]
          Length = 302

 Score =  226 bits (577), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 138/312 (44%), Positives = 184/312 (58%), Gaps = 22/312 (7%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTPSEFRR 111
           F  F   +++TY ++EE  +R  VF  N+ RA++ Q LD  TA +GVTKFSDLT  EFR 
Sbjct: 5   FKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEEEFRT 64

Query: 112 QFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALE 171
            +L    R + P +  K      +  P ++DWR  GAVT VKDQG CGSCW+FS TG +E
Sbjct: 65  IYLNTLLR-KEPGNKMKQAKSVGDLAPPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVE 123

Query: 172 GAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKD 231
           G  FL+ G L+SLSEQ+L+DCD           D  C GGL ++A+  I   GG+E E D
Sbjct: 124 GQWFLNQGTLLSLSEQELLDCDK---------MDKACMGGLPSNAYSAIKNLGGLETEDD 174

Query: 232 YPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGG 291
           Y Y G    SC F   K    +++   +S +E ++AA L K GP++V INA  MQ Y  G
Sbjct: 175 YSYQG-HMQSCNFSAEKAKVYINDSVELSQNEQKLAAWLAKRGPISVAINAFGMQFYRHG 233

Query: 292 VSCPY--ICGKYL-DHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMG 348
           +S P   +C  +L DH VL+VGYG+         + P+W IKNSWG +WGE GYY +  G
Sbjct: 234 ISRPLRPLCSPWLIDHAVLLVGYGNR-------SDVPFWAIKNSWGTDWGEKGYYYLHRG 286

Query: 349 RNVCGVDSMVSS 360
              CGV++M SS
Sbjct: 287 SGACGVNTMASS 298


>gi|6467382|gb|AAF13146.1|AF136279_1 cathepsin F precursor [Homo sapiens]
          Length = 484

 Score =  226 bits (577), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 139/323 (43%), Positives = 188/323 (58%), Gaps = 22/323 (6%)

Query: 42  SEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTK 100
           S+D  +     F  F   +++TY ++EE  +R  VF  N+ RA++ Q LD  TA +GVTK
Sbjct: 176 SQDLPVKMASIFKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTK 235

Query: 101 FSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGS 160
           FSDLT  EFR  +L    R + P +  K      +  P ++DWR  GAVT VKDQG CGS
Sbjct: 236 FSDLTEEEFRTIYLNTLLR-KEPGNKMKQAKSVGDLAPPEWDWRSKGAVTKVKDQGMCGS 294

Query: 161 CWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYI 220
           CW+FS TG ++G  FL+ G L+SLSEQ+L+DCD           D  C GGL ++A+  I
Sbjct: 295 CWAFSVTGNVKGQWFLNQGTLLSLSEQELLDCDK---------MDKACMGGLPSNAYSAI 345

Query: 221 LKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGI 280
              GG+E E DY Y G    SC F   K    +++   +S +E ++AA L K GP++V I
Sbjct: 346 KNLGGLETEDDYSYQG-HMQSCNFSAEKAKVYINDSVELSQNEQKLAAWLAKRGPISVAI 404

Query: 281 NAVWMQTYIGGVSCPY--ICGKYL-DHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENW 337
           NA  MQ Y  G+S P   +C  +L DH VL+VGYG+         + P+W IKNSWG +W
Sbjct: 405 NAFGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNR-------SDVPFWAIKNSWGTDW 457

Query: 338 GENGYYKICMGRNVCGVDSMVSS 360
           GE GYY +  G   CGV++M SS
Sbjct: 458 GEKGYYYLHRGSGACGVNTMASS 480


>gi|426369382|ref|XP_004051670.1| PREDICTED: cathepsin F [Gorilla gorilla gorilla]
          Length = 517

 Score =  226 bits (577), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 140/313 (44%), Positives = 185/313 (59%), Gaps = 24/313 (7%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTPSEFRR 111
           F  F   +++TY ++EE  +R  VF  N+ RA++ Q LD  TA +GVTKFSDLT  EFR 
Sbjct: 220 FKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEEEFRT 279

Query: 112 QFLGLNRRLRL-PADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGAL 170
            +L  N  LR  P +  K      +  P ++DWR  GAVT VKDQG CGSCW+FS TG +
Sbjct: 280 IYL--NSLLREEPGNKMKQAKSVGDLAPPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNV 337

Query: 171 EGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREK 230
           EG  FL+ G L+SLSEQ+L+DCD           D  C GGL ++A+  I   GG+E E 
Sbjct: 338 EGQWFLNQGTLLSLSEQELLDCDK---------MDKACMGGLPSNAYSAIKNLGGLETED 388

Query: 231 DYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIG 290
           DY Y G    SC F   K    +++   +S +E ++AA L K GP++V INA  MQ Y  
Sbjct: 389 DYSYQG-HMQSCNFSAEKAKVYINDSVELSQNEQKLAAWLAKRGPISVAINAFGMQFYRH 447

Query: 291 GVSCPY--ICGKYL-DHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICM 347
           G+S P   +C  +L DH VL+VGYG+         + P+W IKNSWG +WGE GYY +  
Sbjct: 448 GISRPLRPLCSPWLIDHAVLLVGYGNR-------SDVPFWAIKNSWGTDWGEKGYYYLHR 500

Query: 348 GRNVCGVDSMVSS 360
           G   CGV++M SS
Sbjct: 501 GSGACGVNTMASS 513


>gi|403293601|ref|XP_003937801.1| PREDICTED: cathepsin F [Saimiri boliviensis boliviensis]
          Length = 379

 Score =  226 bits (577), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 140/324 (43%), Positives = 187/324 (57%), Gaps = 24/324 (7%)

Query: 43  EDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKF 101
           +D  +     F  F   +++TY ++EE  +R  +F  N+ RA++ Q LD  TA +GVTKF
Sbjct: 72  QDLTVKMASIFRNFVITYNRTYESKEEAQWRLSIFAHNMVRAQKIQALDRGTAQYGVTKF 131

Query: 102 SDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDL-PTDFDWRDHGAVTGVKDQGACGS 160
           SDLT  EFR  +L  N  LR     +        DL P ++DWR  GAVT VKDQG CGS
Sbjct: 132 SDLTEEEFRTIYL--NPLLREEPGKKMKQAKSVGDLAPPEWDWRSKGAVTKVKDQGMCGS 189

Query: 161 CWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYI 220
           CW+FS TG +EG  FL+ G L+SLSEQ+L+DCD           D  C GGL +SA+  I
Sbjct: 190 CWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDK---------IDKACMGGLPSSAYSAI 240

Query: 221 LKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGI 280
              GG+E E DY Y G    +C F   K    +++   +S +E ++AA L K GP++V I
Sbjct: 241 KNLGGLETEDDYSYRG-HMQACSFSPEKAKVYINDSVELSQNEQKLAAWLAKRGPISVAI 299

Query: 281 NAVWMQTYIGGVSCPY--ICGKYL-DHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENW 337
           NA  MQ Y  G+S P   +C  +L DH VL+VGYG+         + P+W IKNSWG +W
Sbjct: 300 NAFGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRS-------DIPFWAIKNSWGTDW 352

Query: 338 GENGYYKICMGRNVCGVDSMVSSV 361
           GE GYY +  G   CGV++M SS 
Sbjct: 353 GEKGYYYLHRGSGACGVNTMASSA 376


>gi|4581057|gb|AAD24589.1|AF139913_1 cysteine protease [Trypanosoma congolense]
          Length = 440

 Score =  226 bits (577), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 129/316 (40%), Positives = 174/316 (55%), Gaps = 22/316 (6%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEF 109
           +  F+ FK K+S++Y    E  +RFRVFK N+ RAK     +P A  GVT+FSD++P EF
Sbjct: 38  QQQFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSPEEF 97

Query: 110 RRQFL-GLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATG 168
           R  +  G           +K   + T   P   DWR  GAVT VKDQG C S W+FSA G
Sbjct: 98  RATYHNGAEYYAAALKRPRKVVNVSTGKAPPAIDWRKKGAVTPVKDQGQCHSSWAFSAIG 157

Query: 169 ALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA--GGV 226
            +EG   ++  EL SLSEQ LV CD           D GC GG  + AF++I+ +  G V
Sbjct: 158 NIEGQWKIAGHELTSLSEQMLVSCDTN---------DFGCGGGFSDPAFKWIVSSNKGNV 208

Query: 227 EREKDYPYTGTDGGSCKFDKSK--IAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW 284
             E+ YPY    G     DKS   + A + +   +  DE+ +A  L K GP+A+ ++A  
Sbjct: 209 FTEQSYPYASGGGNVPTCDKSGKVVGAKIRDRVDLPRDENAIAEWLAKKGPVAIAVDATS 268

Query: 285 MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYK 344
            Q+Y GGV    I  ++LDHGVL+VGY  +        + PYWIIKNSWG+ WGE GY +
Sbjct: 269 FQSYTGGVLTSCI-SEHLDHGVLLVGYDDT-------SKPPYWIIKNSWGKGWGEEGYIR 320

Query: 345 ICMGRNVCGVDSMVSS 360
           I  G N C + ++ SS
Sbjct: 321 IEKGTNQCLMKNLPSS 336


>gi|375073976|gb|AFA34855.1| cathepsin L-like protein [Trypanosoma cruzi]
          Length = 467

 Score =  226 bits (577), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 138/368 (37%), Positives = 186/368 (50%), Gaps = 53/368 (14%)

Query: 4   LILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKT 63
           L L+++L+++   V A+  +++ ++ +  Q                   F+ FK K  + 
Sbjct: 8   LSLAAVLVVMACLVPAATASLHAEETLASQ-------------------FAEFKQKHGRV 48

Query: 64  YATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ-------FLGL 116
           Y +  E  +R  VF+ NL  A+     +P A  GVT FSDLT  EFR +       F   
Sbjct: 49  YGSAAEEAFRLSVFRENLFLARLHAAANPHATFGVTPFSDLTREEFRSRYHNGAAHFAAA 108

Query: 117 NRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFL 176
             R R+P + +          P   DWR  GAVT VKDQG CGSCW+FSA G +E   FL
Sbjct: 109 QERARVPVNVEVV------GAPAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFL 162

Query: 177 STGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA--GGVEREKDYPY 234
           +   L +LSEQ LV CD           DSGC GGLMN+AFE+I++   G V  E  YPY
Sbjct: 163 AGHPLTNLSEQMLVSCDKT---------DSGCGGGLMNNAFEWIVQENNGAVYTEGSYPY 213

Query: 235 TGTDGGS--CKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGV 292
              +G S  C      + A ++    +  DE Q+AA L  +GP+AV ++A    TY GGV
Sbjct: 214 ASGEGISPPCTTSGHTVGATITGHVELPQDEAQIAAWLAVNGPVAVAVDASSWMTYTGGV 273

Query: 293 SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVC 352
               +  + LDHGVL+VGY  S          PYW+IKNSW   WGE+GY +I  G N C
Sbjct: 274 MTSCV-SEQLDHGVLLVGYNDSAAV-------PYWVIKNSWTTQWGEDGYIRIAKGSNQC 325

Query: 353 GVDSMVSS 360
            V    SS
Sbjct: 326 LVKEEASS 333


>gi|19747207|gb|AAL96762.1|AC104496_8 Tcc1l8.8 [Trypanosoma cruzi]
          Length = 500

 Score =  226 bits (577), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 133/320 (41%), Positives = 166/320 (51%), Gaps = 34/320 (10%)

Query: 52  HFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRR 111
            F+ FK K  + Y +  E  +R  VF+ NL  A+     +P A  GVT FSDLT  EFR 
Sbjct: 70  QFAEFKQKHGRVYESAAEEAFRLSVFRENLFLARLHAAANPHATFGVTPFSDLTREEFRS 129

Query: 112 Q-------FLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSF 164
           +       F     R R+P   +          P   DWR  GAVT VKDQG CGSCW+F
Sbjct: 130 RYHNGAVHFAAAQERARVPVKVEVV------GAPAAVDWRARGAVTAVKDQGQCGSCWAF 183

Query: 165 SATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA- 223
           SA G +E   FL+   L +LSEQ LV CD           DSGC+GGLMN+AFE+I++  
Sbjct: 184 SAIGNVECQWFLAGHPLTNLSEQMLVSCDKT---------DSGCSGGLMNNAFEWIVQEN 234

Query: 224 -GGVEREKDYPYTGTDGGS--CKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGI 280
            G V  E  YPY   +G S  C      + A ++    +  DE Q+AA L  +GP+AV +
Sbjct: 235 NGAVYTEDSYPYASGEGISPPCTTSGHTVGATITGHVELPQDEAQIAAWLAVNGPVAVAV 294

Query: 281 NAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGEN 340
           +A    TY GGV    +  + LDHGVL+VGY  S          PYWIIKNSW   WGE 
Sbjct: 295 DASSWMTYTGGVMTSCV-SEQLDHGVLLVGYNDSAAV-------PYWIIKNSWTTQWGEE 346

Query: 341 GYYKICMGRNVCGVDSMVSS 360
           GY +I  G N C V    SS
Sbjct: 347 GYIRIAKGLNQCLVKEEASS 366


>gi|395742406|ref|XP_003777749.1| PREDICTED: LOW QUALITY PROTEIN: cathepsin F [Pongo abelii]
          Length = 490

 Score =  226 bits (576), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 139/314 (44%), Positives = 184/314 (58%), Gaps = 24/314 (7%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTPSEFRR 111
           F  F   +++TY ++EE  +R  +F  N+ RA++ Q LD  TA +GVTKFSDLT  EFR 
Sbjct: 193 FKNFVITYNRTYESKEEARWRLSIFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEEEFRT 252

Query: 112 QFLGLNRRLRLPADAQKAPILPTNDL-PTDFDWRDHGAVTGVKDQGACGSCWSFSATGAL 170
            +L  N  LR     +        DL P ++DWR  GAVT VKDQG CGSCW+FS TG +
Sbjct: 253 IYL--NPLLREEPSNKMKQAKSVGDLAPPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNV 310

Query: 171 EGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREK 230
           EG  FL+ G L+SLSEQ+L+DCD           D  C GGL ++A+  I   GG+E E 
Sbjct: 311 EGQWFLNQGTLLSLSEQELLDCDK---------MDKACMGGLPSNAYSAIKNLGGLETED 361

Query: 231 DYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIG 290
           DY Y G    SC F   K    +++   +S +E ++AA L K GP++V INA  MQ Y  
Sbjct: 362 DYSYQG-HMQSCNFSAEKAKVYINDSVELSQNEQKLAAWLAKRGPISVAINAFGMQFYRH 420

Query: 291 GVSCPY--ICGKYL-DHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICM 347
           G+S P   +C  +L DH VL+VGYG+         + P+W IKNSWG +WGE GYY +  
Sbjct: 421 GISRPLRPLCSPWLIDHAVLLVGYGNR-------SDVPFWAIKNSWGTDWGEKGYYYLHR 473

Query: 348 GRNVCGVDSMVSSV 361
           G   CGV++M SS 
Sbjct: 474 GSGACGVNTMASSA 487


>gi|326430490|gb|EGD76060.1| cysteine proteinase [Salpingoeca sp. ATCC 50818]
          Length = 448

 Score =  226 bits (576), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 144/322 (44%), Positives = 186/322 (57%), Gaps = 40/322 (12%)

Query: 47  LNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH----GVTKFS 102
           +N    F  FK+KF+K Y + EE   RF VF  N+    R        VH     V +F+
Sbjct: 24  VNKGRLFDAFKTKFNKVYESAEEEARRFSVFSQNIDFINRHNAEAARGVHTHTVDVNQFA 83

Query: 103 DLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCW 162
           DLT  E+R+ +L       L  + Q+  +   N      DWR  GAVT +K+QG CGSCW
Sbjct: 84  DLTNEEYRQLYLRPYPTELLGRERQEVWLDGPN--AGSVDWRQKGAVTPIKNQGQCGSCW 141

Query: 163 SFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSC-DSGCNGGLMNSAFEYIL 221
           SFS TG++EGAH ++TG LVSLSEQQLVDC        SGS  + GCNGGLM++AF+YI+
Sbjct: 142 SFSTTGSVEGAHAIATGNLVSLSEQQLVDC--------SGSFGNQGCNGGLMDNAFKYII 193

Query: 222 KAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFS-VISSDEDQMAANLVKHGPLAVGI 280
             GG++ E+DYPYT  DG   K  +SK A ++S +  V  ++EDQ+AA  V+ GP++V I
Sbjct: 194 SNGGLDTEQDYPYTARDGVCDKSKESKHAVSISGYKDVPQNNEDQLAA-AVEKGPVSVAI 252

Query: 281 NA--VWMQTYIGGV-SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENW 337
            A     Q Y  GV S P  CG  LDHGVL+VGY S            YWI+KNSWG +W
Sbjct: 253 EADQQSFQMYSSGVFSGP--CGTNLDHGVLVVGYTSD-----------YWIVKNSWGASW 299

Query: 338 GENGYYKICMGRNV-----CGV 354
           G+ GY  I M R V     CG+
Sbjct: 300 GDQGY--IMMKRGVSSAGICGI 319


>gi|11464864|gb|AAG35357.1|AF314929_1 cruzipain [Trypanosoma cruzi]
          Length = 467

 Score =  226 bits (576), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 133/320 (41%), Positives = 166/320 (51%), Gaps = 34/320 (10%)

Query: 52  HFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRR 111
            F+ FK K  + Y +  E  +R  VF+ NL  A+     +P A  GVT FSDLT  EFR 
Sbjct: 37  QFAEFKQKHGRVYESAAEEAFRLSVFRENLFLARLHAAANPHATFGVTPFSDLTREEFRS 96

Query: 112 Q-------FLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSF 164
           +       F     R R+P   +          P   DWR  GAVT VKDQG CGSCW+F
Sbjct: 97  RYHNGAAHFAAAQERARVPVKVEVV------GAPAAVDWRARGAVTAVKDQGQCGSCWAF 150

Query: 165 SATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA- 223
           SA G +E   FL+   L +LSEQ LV CD           DSGC+GGLMN+AFE+I++  
Sbjct: 151 SAIGNVECQWFLAGHPLTNLSEQMLVSCDKT---------DSGCSGGLMNNAFEWIVQEN 201

Query: 224 -GGVEREKDYPYTGTDGGS--CKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGI 280
            G V  E  YPY   +G S  C      + A ++    +  DE Q+AA L  +GP+AV +
Sbjct: 202 NGAVYTEDSYPYASGEGISPPCTTSGHTVGATITGHVELPQDEAQIAAWLAVNGPVAVAV 261

Query: 281 NAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGEN 340
           +A    TY GGV    +  + LDHGVL+VGY  S          PYWIIKNSW   WGE 
Sbjct: 262 DASSWMTYTGGVMTSCV-SEQLDHGVLLVGYNDSAAV-------PYWIIKNSWTTQWGEE 313

Query: 341 GYYKICMGRNVCGVDSMVSS 360
           GY +I  G N C V    SS
Sbjct: 314 GYIRIAKGSNQCLVKEEASS 333


>gi|118157|sp|P25779.1|CYSP_TRYCR RecName: Full=Cruzipain; AltName: Full=Cruzaine; AltName:
           Full=Major cysteine proteinase; Flags: Precursor
 gi|162048|gb|AAA30181.1| cruzain [Trypanosoma cruzi]
 gi|29409382|gb|AAM33131.1| cysteine proteinase precursor [Trypanosoma cruzi]
          Length = 467

 Score =  226 bits (576), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 133/320 (41%), Positives = 166/320 (51%), Gaps = 34/320 (10%)

Query: 52  HFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRR 111
            F+ FK K  + Y +  E  +R  VF+ NL  A+     +P A  GVT FSDLT  EFR 
Sbjct: 37  QFAEFKQKHGRVYESAAEEAFRLSVFRENLFLARLHAAANPHATFGVTPFSDLTREEFRS 96

Query: 112 Q-------FLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSF 164
           +       F     R R+P   +          P   DWR  GAVT VKDQG CGSCW+F
Sbjct: 97  RYHNGAAHFAAAQERARVPVKVEVV------GAPAAVDWRARGAVTAVKDQGQCGSCWAF 150

Query: 165 SATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA- 223
           SA G +E   FL+   L +LSEQ LV CD           DSGC+GGLMN+AFE+I++  
Sbjct: 151 SAIGNVECQWFLAGHPLTNLSEQMLVSCDKT---------DSGCSGGLMNNAFEWIVQEN 201

Query: 224 -GGVEREKDYPYTGTDGGS--CKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGI 280
            G V  E  YPY   +G S  C      + A ++    +  DE Q+AA L  +GP+AV +
Sbjct: 202 NGAVYTEDSYPYASGEGISPPCTTSGHTVGATITGHVELPQDEAQIAAWLAVNGPVAVAV 261

Query: 281 NAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGEN 340
           +A    TY GGV    +  + LDHGVL+VGY  S          PYWIIKNSW   WGE 
Sbjct: 262 DASSWMTYTGGVMTSCV-SEQLDHGVLLVGYNDSAAV-------PYWIIKNSWTTQWGEE 313

Query: 341 GYYKICMGRNVCGVDSMVSS 360
           GY +I  G N C V    SS
Sbjct: 314 GYIRIAKGSNQCLVKEEASS 333


>gi|71663163|ref|XP_818578.1| cysteine peptidase [Trypanosoma cruzi strain CL Brener]
 gi|70883837|gb|EAN96727.1| cysteine peptidase, putative [Trypanosoma cruzi]
          Length = 467

 Score =  226 bits (576), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 133/320 (41%), Positives = 166/320 (51%), Gaps = 34/320 (10%)

Query: 52  HFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRR 111
            F+ FK K  + Y +  E  +R  VF+ NL  A+     +P A  GVT FSDLT  EFR 
Sbjct: 37  QFAEFKQKHGRVYESAAEEAFRLSVFRENLFLARLHAAANPHATFGVTPFSDLTREEFRS 96

Query: 112 Q-------FLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSF 164
           +       F     R R+P   +          P   DWR  GAVT VKDQG CGSCW+F
Sbjct: 97  RYHNGAVHFAAAQERARVPVKVEVV------GAPAAVDWRARGAVTAVKDQGQCGSCWAF 150

Query: 165 SATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA- 223
           SA G +E   FL+   L +LSEQ LV CD           DSGC+GGLMN+AFE+I++  
Sbjct: 151 SAIGNVECQWFLAGHPLTNLSEQMLVSCDKT---------DSGCSGGLMNNAFEWIVQEN 201

Query: 224 -GGVEREKDYPYTGTDGGS--CKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGI 280
            G V  E  YPY   +G S  C      + A ++    +  DE Q+AA L  +GP+AV +
Sbjct: 202 NGAVYTEDSYPYASGEGISPPCTTSGHTVGATITGHVELPQDEAQIAAWLAVNGPVAVAV 261

Query: 281 NAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGEN 340
           +A    TY GGV    +  + LDHGVL+VGY  S          PYWIIKNSW   WGE 
Sbjct: 262 DASSWMTYTGGVMTSCV-SEQLDHGVLLVGYNDSAAV-------PYWIIKNSWTTQWGEE 313

Query: 341 GYYKICMGRNVCGVDSMVSS 360
           GY +I  G N C V    SS
Sbjct: 314 GYIRIAKGSNQCLVKEEASS 333


>gi|343477207|emb|CCD11901.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 361

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 127/316 (40%), Positives = 171/316 (54%), Gaps = 22/316 (6%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEF 109
           +  F+ FK K+S++Y    E  +RFRVFK N+ RAK     +P A  GVT+FSD++P EF
Sbjct: 38  QQQFAAFKQKYSRSYRDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSPEEF 97

Query: 110 RRQFL-GLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATG 168
           R  +  G           +K   + T   P   DWR  GAVT VKDQG C S W+FSA G
Sbjct: 98  RATYHNGAEYYAAALKRPRKVVNVSTGRPPMTVDWRKKGAVTPVKDQGKCDSSWAFSAIG 157

Query: 169 ALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYIL--KAGGV 226
            +EG   ++  EL SLSEQ LV CD +         D GC GG  + AF++IL    G V
Sbjct: 158 NIEGQWKIAGHELTSLSEQMLVSCDTD---------DFGCRGGFSDPAFKWILWSNKGNV 208

Query: 227 EREKDYPYTGTDGG--SCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW 284
             E+ YPY    G   +CK     + A +SN   +  DED +   L + GP+A+ ++A  
Sbjct: 209 FTEQSYPYASGGGNVPTCKMSGKVVGAKISNRLYLPEDEDMITEWLARKGPVAIAVDATS 268

Query: 285 MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYK 344
            Q+Y GGV    I  K +++G L+VGY  +        + PYWIIKNSW + WGE GY +
Sbjct: 269 FQSYTGGVLTSCI-SKEMNYGALLVGYDDT-------SKPPYWIIKNSWSKGWGEEGYIR 320

Query: 345 ICMGRNVCGVDSMVSS 360
           I  G N C V ++ SS
Sbjct: 321 IEKGTNQCLVKNLPSS 336


>gi|146335582|gb|ABQ23400.1| cathepsin L isotype 3 [Trypanoplasma borreli]
          Length = 442

 Score =  226 bits (575), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 126/322 (39%), Positives = 182/322 (56%), Gaps = 28/322 (8%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEF 109
           E  F  FK+  ++ YA+ +E   RF +F AN+++A      +P A  G  +F+D++  EF
Sbjct: 22  EVLFRDFKTTHARNYASADEERKRFEIFAANMKKAAELNRKNPMATFGPNEFADMSSEEF 81

Query: 110 RRQFLGLNRRLRLPADAQKAPILPTND-----LPTDFDWRDHGAVTGVKDQGACGSCWSF 164
           + +         + A   K     T +     +    DWR  GAVT VK+QG+CGSCWSF
Sbjct: 82  QTRHNAARHYAAVMARPPKNTKTFTEEEINAAVGQKVDWRLKGAVTPVKNQGSCGSCWSF 141

Query: 165 SATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA- 223
           S TG +EG H ++TG+LVSLSEQ+LV CD         + D GC+GGLM++AF ++L A 
Sbjct: 142 STTGNIEGQHAIATGQLVSLSEQELVSCD---------TVDDGCSGGLMDNAFGWLLSAH 192

Query: 224 -GGVEREKDYPYTGTDG--GSCKFDKSK--IAAAVSNFSVISSDEDQMAANLVKHGPLAV 278
            G +  E  YPY   +G   +C F+ +   + A +++F  I   E  MAA + K+GPL++
Sbjct: 193 NGQITTEASYPYVSGNGIVPACTFNSNSNPVGATITSFHDIPKTERDMAAFVFKYGPLSI 252

Query: 279 GINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWG 338
           G++A   Q+YIGG+   +     +DHGVLIVG+  +          PYWIIKNSW   WG
Sbjct: 253 GVDASSWQSYIGGI-LSHCSDVQIDHGVLIVGFDDTA-------STPYWIIKNSWSSMWG 304

Query: 339 ENGYYKICMGRNVCGVDSMVSS 360
           E GY ++  G N CG+ S  SS
Sbjct: 305 EQGYIRVAKGSNQCGLTSFPSS 326


>gi|37732137|gb|AAR02406.1| cysteine proteinase [Anthonomus grandis]
          Length = 322

 Score =  226 bits (575), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 123/306 (40%), Positives = 177/306 (57%), Gaps = 25/306 (8%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAV----HGVTKFSDLTPSE 108
           F  FK +  K+Y  Q E   RF +F+AN+   ++   L    +      + +F+DLT  E
Sbjct: 26  FETFKVENGKSYRNQVEEVQRFNIFRANVLEIEQHNALYEQGLVSYKKAINQFTDLTQEE 85

Query: 109 FRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATG 168
           F+  +LGL+ +  L    Q    L   ++PT  DWR  G VTGVK+QG+CGSCWSF+ TG
Sbjct: 86  FKA-YLGLHVKPVLNNTIQYE--LKGLEVPTSVDWRSAGQVTGVKNQGSCGSCWSFALTG 142

Query: 169 ALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVER 228
           + EGA++    +LVSLSEQQLVDC        S S + GCNGG +++ F YI +  G++ 
Sbjct: 143 STEGAYYRKHKQLVSLSEQQLVDC--------STSINYGCNGGFLDATFPYIEQY-GLQT 193

Query: 229 EKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTY 288
           E  YPYTG D GSCK+D SK+   +SN+  +   E ++   +   GP+A+ ++A ++ +Y
Sbjct: 194 ESSYPYTGVD-GSCKYDSSKVVTKISNYVSLHGSESKVLEPVGSIGPVAITMDASYLSSY 252

Query: 289 IGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICM 347
             G+     C    L+H VL+VGYGS          + YWI+KNSWG  WGE GY+++  
Sbjct: 253 SSGIYAANKCTTTNLNHAVLVVGYGSQ-------NGQNYWIVKNSWGSGWGEQGYFRLLR 305

Query: 348 GRNVCG 353
           G N CG
Sbjct: 306 GSNECG 311


>gi|49456321|emb|CAG46481.1| CTSF [Homo sapiens]
          Length = 338

 Score =  226 bits (575), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 139/323 (43%), Positives = 187/323 (57%), Gaps = 22/323 (6%)

Query: 42  SEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTK 100
           S+D  +     F  F   +++TY ++EE  +R  VF  N+ RA++ Q LD  TA +GVTK
Sbjct: 30  SQDLPVKMASIFKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTK 89

Query: 101 FSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGS 160
           FSDLT  EFR  +L    R + P +  K      +  P ++DWR  GAVT VKDQG CGS
Sbjct: 90  FSDLTEEEFRTIYLNTLLR-KEPGNKMKQAKSVGDLAPPEWDWRSKGAVTKVKDQGMCGS 148

Query: 161 CWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYI 220
           CW+FS TG +EG  FL+ G L+SLSEQ+L+DCD           D  C GGL ++A+  I
Sbjct: 149 CWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDK---------MDKACMGGLPSNAYSAI 199

Query: 221 LKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGI 280
              GG+E   DY Y G    SC F   K    +++   +S +E ++AA L K GP++V I
Sbjct: 200 KNLGGLETVDDYSYQG-HMQSCNFSAEKAKVYINDSVELSQNEQKLAAWLAKRGPISVAI 258

Query: 281 NAVWMQTYIGGVSCPY--ICGKYL-DHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENW 337
           NA  MQ Y  G+S P   +C  +L DH VL+VGYG+         + P+W IKNSWG +W
Sbjct: 259 NAFGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRS-------DVPFWAIKNSWGTDW 311

Query: 338 GENGYYKICMGRNVCGVDSMVSS 360
           GE GYY +  G   CGV++M SS
Sbjct: 312 GEKGYYYLHRGSGACGVNTMASS 334


>gi|332375406|gb|AEE62844.1| unknown [Dendroctonus ponderosae]
          Length = 320

 Score =  225 bits (574), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 132/310 (42%), Positives = 181/310 (58%), Gaps = 29/310 (9%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANL-----RRAKRRQLLDPTAVHGVTKFSDLTPS 107
           F  FK K +KTY T  E   R+ +F+A L       ++  Q L+ T   GV KFSD T  
Sbjct: 23  FQAFKLKQNKTYKTPVEETTRYGIFQAKLLEIEEHNSRFEQGLE-TYKKGVNKFSDWTQD 81

Query: 108 EFRRQFLGLNRRLRLPADAQKA-PILPTN-DLPTDFDWRDHGAVTGVKDQGACGSCWSFS 165
           EF   +LGL+ +   PA   K  P + T   +P   DWR  G VTGVK+QG CGSCW+FS
Sbjct: 82  EFN-AYLGLHPK---PAKLGKGIPYVKTGVSVPASVDWRTEGYVTGVKNQGDCGSCWAFS 137

Query: 166 ATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGG 225
            TG++EGA F STG+LVSLSEQQLVDC +       G+ + GC+GG +   F YI +  G
Sbjct: 138 LTGSVEGALFKSTGKLVSLSEQQLVDCTY-------GTVNFGCDGGYLEETFPYIQET-G 189

Query: 226 VEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWM 285
           +E E  YPY   D G+CKFD SK+   ++++     DE+ +       GP++V ++A ++
Sbjct: 190 LEAEASYPYKARD-GTCKFDASKVVTKINDYVYWYGDEEALLEATATIGPISVAMDANYI 248

Query: 286 QTYIGGVSCPYICGK-YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYK 344
            +Y  GV    +C    L+HGVL+VGYGS            YW++KNSW E+WGE+GY K
Sbjct: 249 DSYASGVFSSRLCSSDDLNHGVLVVGYGSENGV-------NYWLVKNSWAEDWGESGYLK 301

Query: 345 ICMGRNVCGV 354
           +  G+N CG+
Sbjct: 302 LLRGQNECGI 311


>gi|375073980|gb|AFA34857.1| cathepsin L-like protein [Trypanosoma cruzi marinkellei]
          Length = 467

 Score =  225 bits (574), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 133/315 (42%), Positives = 170/315 (53%), Gaps = 22/315 (6%)

Query: 52  HFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRR 111
            F+ FK K  + Y +  E  +R  VF+ NL  A+     +P A  GVT FSDLT  EFR 
Sbjct: 37  QFAEFKQKHGRVYKSAAEEAFRLSVFRENLFLARLHAAANPHATFGVTPFSDLTREEFRS 96

Query: 112 QFL-GLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGAL 170
           ++  G          A+    +    +P   DWR  GAVT VKDQG CGSCW+FSA G +
Sbjct: 97  RYHNGAAHFAAAQERARVPVNVEVVGVPAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNV 156

Query: 171 EGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA--GGVER 228
           E   FL+   L +LSEQ LV CD           DSGC+GGLMN AFE+I++   G V  
Sbjct: 157 ESQWFLAGHPLTNLSEQMLVSCDKT---------DSGCSGGLMNDAFEWIVQENDGAVYT 207

Query: 229 EKDYPYTGTDGGS--CKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQ 286
           E+ YPY   +G S  C      + A ++    +  DE Q+AA L  +GP+AV ++A    
Sbjct: 208 EESYPYASGEGISPPCTTSGHTVGATITGHVELPQDEAQIAAWLAANGPVAVAVDATSWM 267

Query: 287 TYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKIC 346
           TY GGV    +  + LDHGVL+VGY  S  AP+     PYWIIKNSW   WGE+GY +I 
Sbjct: 268 TYTGGVMTSCV-SEQLDHGVLLVGYNDS--APV-----PYWIIKNSWTTLWGEDGYIRIA 319

Query: 347 MGRNVCGVDSMVSSV 361
            G N C V    SS 
Sbjct: 320 KGSNQCLVKEEASSA 334


>gi|238816977|gb|ACR56863.1| cathepsin L-like cysteine proteinase [Delia coarctata]
          Length = 338

 Score =  225 bits (574), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 133/317 (41%), Positives = 176/317 (55%), Gaps = 29/317 (9%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRR-AKRRQLLDPTAVH---GVTKFSDLTPSE 108
           +  FK +  K Y ++ E  +R ++F  N  + AK  QL     V    G+ K++D+   E
Sbjct: 27  WQTFKMEHRKNYLSEVEERFRMKIFNENRHKIAKHNQLYAQGKVSFKLGLNKYADMLHHE 86

Query: 109 FRRQFLGLNRRLRLPADAQKA-----PILPTN-DLPTDFDWRDHGAVTGVKDQGACGSCW 162
           F+    G N  +R    AQ+       I P N  +P   DWR HGAVT VKDQG CGSCW
Sbjct: 87  FKETMNGYNHTMRKELRAQEGFNGITYISPANVQVPKAVDWRQHGAVTSVKDQGHCGSCW 146

Query: 163 SFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK 222
           SFS+TG+LEG HF   G LVSLSEQ LVDC        +   ++GCNGGLM++AF YI  
Sbjct: 147 SFSSTGSLEGQHFRKAGVLVSLSEQNLVDC-------STKYGNNGCNGGLMDNAFRYIKD 199

Query: 223 AGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVGIN 281
            GGV+ EK YPY G D  SC F+K+ + A  + F  +   DE+ M   +   GP+AV I+
Sbjct: 200 NGGVDTEKSYPYEGID-DSCHFNKATVGATDTGFVDIPQGDEEAMMKAVATMGPVAVAID 258

Query: 282 AV--WMQTYIGGV-SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWG 338
           A     Q Y  GV + P      LDHGVL+VGYG+          + YW++KNSWG  WG
Sbjct: 259 ASNESFQLYSEGVYNDPNCSSDNLDHGVLVVGYGTDK------DGQDYWLVKNSWGTTWG 312

Query: 339 ENGYYKICMGR-NVCGV 354
           + GY K+   + N CG+
Sbjct: 313 DQGYIKMARNQDNQCGI 329


>gi|22653679|sp|Q26636.1|CATL_SARPE RecName: Full=Cathepsin L; Contains: RecName: Full=Cathepsin L
           heavy chain; Contains: RecName: Full=Cathepsin L light
           chain; Flags: Precursor
 gi|505140|dbj|BAA03970.1| cathepsin L precursor [Sarcophaga peregrina]
          Length = 339

 Score =  225 bits (574), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 137/331 (41%), Positives = 182/331 (54%), Gaps = 35/331 (10%)

Query: 46  LLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRR-AKRRQLLDPTAVH---GVTKF 101
           L+  E H   +K +  K YA + E  +R ++F  N  + AK  QL     V    G+ K+
Sbjct: 23  LIKEEWH--TYKLQHRKNYANEVEERFRMKIFNENRHKIAKHNQLFAQGKVSYKLGLNKY 80

Query: 102 SDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTN------DLPTDFDWRDHGAVTGVKDQ 155
           +D+   EF+    G N  LR     +   +  T        +P   DWR+HGAVTGVKDQ
Sbjct: 81  ADMLHHEFKETMNGYNHTLRQLMRERTGLVGATYIPPAHVTVPKSVDWREHGAVTGVKDQ 140

Query: 156 GACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNS 215
           G CGSCW+FS+TGALEG HF   G LVSLSEQ LVDC        +   ++GCNGGLM++
Sbjct: 141 GHCGSCWAFSSTGALEGQHFRKAGVLVSLSEQNLVDCS-------TKYGNNGCNGGLMDN 193

Query: 216 AFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHG 274
           AF YI   GG++ EK YPY G D  SC F+K+ I A  + F  +   DE++M   +   G
Sbjct: 194 AFRYIKDNGGIDTEKSYPYEGID-DSCHFNKATIGATDTGFVDIPEGDEEKMKKAVATMG 252

Query: 275 PLAVGINAVW--MQTYIGGVSCPYICGKY-LDHGVLIVGYGS--SGFAPIRFKEKPYWII 329
           P++V I+A     Q Y  GV     C +  LDHGVL+VGYG+  SG          YW++
Sbjct: 253 PVSVAIDASHESFQLYSEGVYNEPECDEQNLDHGVLVVGYGTDESGM--------DYWLV 304

Query: 330 KNSWGENWGENGYYKICMGR-NVCGVDSMVS 359
           KNSWG  WGE GY K+   + N CG+ +  S
Sbjct: 305 KNSWGTTWGEQGYIKMARNQNNQCGIATASS 335


>gi|71406896|ref|XP_805951.1| cysteine peptidase [Trypanosoma cruzi strain CL Brener]
 gi|70869552|gb|EAN84100.1| cysteine peptidase, putative [Trypanosoma cruzi]
          Length = 426

 Score =  225 bits (574), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 134/322 (41%), Positives = 167/322 (51%), Gaps = 34/322 (10%)

Query: 52  HFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRR 111
            F+ FK K  + Y +  E  +R  VF+ NL  A+     +P A  GVT FSDLT  EFR 
Sbjct: 37  QFAEFKQKHGRVYESAAEEAFRLSVFRENLFLARLHAAANPHATFGVTPFSDLTREEFRS 96

Query: 112 Q-------FLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSF 164
           +       F     R R+P   +          P   DWR  GAVT VKDQG CGSCW+F
Sbjct: 97  RYHNGAAHFAAAQERARVPVKVEVV------GAPAAVDWRARGAVTAVKDQGQCGSCWAF 150

Query: 165 SATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA- 223
           SA G +E   FL+   L +LSEQ LV CD           DSGC+GGLMN+AFE+I++  
Sbjct: 151 SAIGNVECQWFLAGHPLTNLSEQMLVSCDKT---------DSGCSGGLMNNAFEWIVQEN 201

Query: 224 -GGVEREKDYPYTGTDGGS--CKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGI 280
            G V  E  YPY   +G S  C      + A ++    +  DE Q+AA L  +GP+AV +
Sbjct: 202 NGAVYTEDSYPYASGEGISPPCTTSGHTVGATITGHVELPQDEAQIAAWLAVNGPVAVAV 261

Query: 281 NAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGEN 340
           +A    TY GGV    +  + LDHGVL+VGY  S          PYWIIKNSW   WGE 
Sbjct: 262 DASSWMTYTGGVMTSCV-SEQLDHGVLLVGYNDSA-------AVPYWIIKNSWTTQWGEE 313

Query: 341 GYYKICMGRNVCGVDSMVSSVA 362
           GY +I  G N C V    SS A
Sbjct: 314 GYIRIAKGLNQCLVKEEASSAA 335


>gi|8468607|gb|AAF75547.1| cruzipain [Trypanosoma cruzi]
          Length = 467

 Score =  225 bits (574), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 139/368 (37%), Positives = 186/368 (50%), Gaps = 53/368 (14%)

Query: 4   LILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKT 63
           L L+++L+++   V A+  +++ ++ +  Q                   F+ FK K  + 
Sbjct: 8   LSLAAVLVVMACLVPAATASLHAEETLASQ-------------------FAEFKQKHGRV 48

Query: 64  YATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ-------FLGL 116
           Y +  E  +R  VF+ NL  A+     +P A  GVT FSDLT  EF  +       F   
Sbjct: 49  YESAAEEAFRLSVFRENLFLARLHAAANPHATFGVTPFSDLTREEFWSRYHNGAAHFAAA 108

Query: 117 NRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFL 176
             R R+P + +          P   DWR  GAVT VKDQG CGSCW+FSA G +E   FL
Sbjct: 109 QERARVPVNVEVV------GAPAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFL 162

Query: 177 STGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA--GGVEREKDYPY 234
           +   L +LSEQ LV CD           DSGC GGLMN+AFE+I++   G V  E  YPY
Sbjct: 163 AGHPLTNLSEQMLVSCDKT---------DSGCGGGLMNNAFEWIVQENNGAVYTEGSYPY 213

Query: 235 TGTDGGS--CKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGV 292
              +G S  C      + A ++    I  DE Q+AA L  +GP+AV ++A    TY GGV
Sbjct: 214 ASGEGISPPCTTSGHTVGATITGHVEIPQDEAQIAAWLAVNGPVAVAVDASSWMTYTGGV 273

Query: 293 SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVC 352
               +  + LDHGVL+VGY  S          PYW+IKNSW  +WGE GY +I  G N C
Sbjct: 274 MTSCV-SEQLDHGVLLVGYNDSAAV-------PYWVIKNSWTTHWGEGGYIRIAKGSNQC 325

Query: 353 GVDSMVSS 360
            V   VSS
Sbjct: 326 LVKEGVSS 333


>gi|74229834|gb|AAU14993.2| cysteine proteinase [Cryptobia salmositica]
          Length = 443

 Score =  225 bits (574), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 127/324 (39%), Positives = 180/324 (55%), Gaps = 32/324 (9%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEF 109
           E  F  FK+  ++ YA+ +E   RF +F  N+++A      +P A  G  +F+D+T  EF
Sbjct: 22  EVLFGNFKAAHARNYASPDEERKRFEIFAGNMKKAAVLNRKNPMATFGPNEFADMTSEEF 81

Query: 110 RRQF----LGLNRRLRLPADAQKAPILPTND-LPTDFDWRDHGAVTGVKDQGACGSCWSF 164
           + +          + R P + +          +    DWR  GAVT VK+QGACGSCWSF
Sbjct: 82  QTRHNAARHYAAAKARPPKNTKTFTAEEIKAAVGQQIDWRLKGAVTPVKNQGACGSCWSF 141

Query: 165 SATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA- 223
           S TG +EG H ++TG+LV++SEQ+LV CD           D GCNGGLM++AF +++ A 
Sbjct: 142 STTGNIEGQHAIATGQLVAVSEQELVSCD---------PIDDGCNGGLMDNAFGWLISAH 192

Query: 224 -GGVEREKDYPYTGTDG----GSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAV 278
            G +  E +YPY   +G     S   +   + A +S F  I+  E+ MAA + KHGPL++
Sbjct: 193 KGQIATEANYPYVSGNGIVPACSSSPESKPVGATISAFQDIARTEEDMAAFVFKHGPLSI 252

Query: 279 GINAVWMQTYIGGVS--CPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGEN 336
           G++A   Q+Y GG+   CP      +DHGVLIVG+  +          PYWIIKNSW  N
Sbjct: 253 GVDASTWQSYAGGIMSYCPQ---DQIDHGVLIVGFDDTA-------STPYWIIKNSWTAN 302

Query: 337 WGENGYYKICMGRNVCGVDSMVSS 360
           WGE GY ++  G N CG+ S  SS
Sbjct: 303 WGEEGYIRVAKGSNQCGLTSHPSS 326


>gi|30685308|ref|NP_566634.2| putative cysteine proteinase [Arabidopsis thaliana]
 gi|30315949|sp|Q9LT77.1|CPR1_ARATH RecName: Full=Probable cysteine proteinase At3g19400; Flags:
           Precursor
 gi|11994462|dbj|BAB02464.1| cysteine proteinase [Arabidopsis thaliana]
 gi|332642715|gb|AEE76236.1| putative cysteine proteinase [Arabidopsis thaliana]
          Length = 362

 Score =  225 bits (573), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 131/312 (41%), Positives = 183/312 (58%), Gaps = 33/312 (10%)

Query: 62  KTYATQEEHDYRFRVFKANLRRA-KRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRL 120
           K Y    E + RF++FK NL+   +   + D T   G+T+F+DLT  EFR  +L   +++
Sbjct: 53  KNYNGLGEKERRFKIFKDNLKFVDEHNSVPDRTFEVGLTRFADLTNEEFRAIYL--RKKM 110

Query: 121 RLPADAQKAP--ILPTND-LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLS 177
               D+ K    +    D LP + DWR +GAV  VKDQG CGSCW+FSA GA+EG + ++
Sbjct: 111 ERTKDSVKTERYLYKEGDVLPDEVDWRANGAVVSVKDQGNCGSCWAFSAVGAVEGINQIT 170

Query: 178 TGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGT 237
           TGEL+SLSEQ+LVDCD        G  ++GC+GG+MN AFE+I+K GG+E ++DYPY   
Sbjct: 171 TGELISLSEQELVDCDR-------GFVNAGCDGGIMNYAFEFIMKNGGIETDQDYPYNAN 223

Query: 238 DGGSCKFDKSKIAAAVS--NFSVISSDEDQMAANLVKHGPLAVGINAV--WMQTYIGGVS 293
           D G C  DK+     V+   +  +  D+++     V H P++V I A     Q Y  GV 
Sbjct: 224 DLGLCNADKNNNTRVVTIDGYEDVPRDDEKSLKKAVAHQPVSVAIEASSQAFQLYKSGVM 283

Query: 294 CPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNV-- 351
               CG  LDHGV++VGYGS+         + YWII+NSWG NWG++GY K  + RN+  
Sbjct: 284 TG-TCGISLDHGVVVVGYGST-------SGEDYWIIRNSWGLNWGDSGYVK--LQRNIDD 333

Query: 352 ----CGVDSMVS 359
               CG+  M S
Sbjct: 334 PFGKCGIAMMPS 345


>gi|168058022|ref|XP_001781010.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162667567|gb|EDQ54194.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 457

 Score =  225 bits (573), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 134/326 (41%), Positives = 192/326 (58%), Gaps = 34/326 (10%)

Query: 35  VPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTA 94
           +P+D    +D LL  +  F+ +  K  K Y+  EE  +RF V+K NL   +R    + + 
Sbjct: 31  MPTD--VGKDQLLAGQ--FAAWAHKHGKVYSAAEERAHRFLVWKDNLEYIQRHSEKNLSY 86

Query: 95  VHGVTKFSDLTPSEFRRQFLGL----NRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVT 150
             G+TKF+DLT  EFRRQ+ G     +RRL+   +A  +     ++ P   DWR+ GAVT
Sbjct: 87  WLGLTKFADLTNEEFRRQYTGTRIDRSRRLKKGRNATGSFRYANSEAPKSIDWREKGAVT 146

Query: 151 GVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNG 210
            VKDQG+CGSCW+FSA G++EG + + TG+ +SLS Q+LVDCD +         + GCNG
Sbjct: 147 SVKDQGSCGSCWAFSAVGSVEGINAIRTGDAISLSVQELVDCDKK--------YNQGCNG 198

Query: 211 GLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAA---AVSNFSVISSDEDQMA 267
           GLM+ AF+++++ GG++ EKDYPY G DG   + D +K+ A    + ++  +  ++++  
Sbjct: 199 GLMDYAFDFVIQNGGIDTEKDYPYQGYDG---RCDVNKMNARVVTIDSYEDVPENDEEAL 255

Query: 268 ANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKP 325
              V   P++V I A     Q Y GGV     CG  LDHGVL VGYGS        K   
Sbjct: 256 KKAVAGQPVSVAIEAGGRDFQLYSGGVFTGR-CGTDLDHGVLAVGYGSE-------KGLD 307

Query: 326 YWIIKNSWGENWGENGYYKICMGRNV 351
           YWI+KNSWGE WGE+GY +  M RN+
Sbjct: 308 YWIVKNSWGEYWGESGYLR--MQRNL 331


>gi|158148921|dbj|BAF81994.1| cysteine proteinase [Platycodon grandiflorus]
          Length = 359

 Score =  225 bits (573), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 147/374 (39%), Positives = 203/374 (54%), Gaps = 35/374 (9%)

Query: 1   MERLILSSLLLLLLSSVL-ASAVAVNDDDAMIRQVVPSDG----EQSEDHLLNAEHH--- 52
           M R+  +S LL+L++ V  ASA +   D   I+QVV SDG    E S   ++    H   
Sbjct: 1   MARVSPASFLLILIACVAGASAGSSFADQNPIKQVV-SDGLRELEASVLQVIGQTRHSLA 59

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           F+ F  ++ K+Y T EE   RF +F  +L+  +       +   GV +F+DLT  EFR+ 
Sbjct: 60  FARFAHRYGKSYETAEEMKRRFSIFVDSLKMIRSHNKKGLSYTLGVNEFADLTWEEFRKH 119

Query: 113 FLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEG 172
            LG  +     A  +    L    LP   DWR+ G VT VK+QG CGSCW+FS TGALE 
Sbjct: 120 RLGAAQNC--SATLKGNHKLTNGLLPLKKDWREVGIVTPVKNQGHCGSCWTFSTTGALEA 177

Query: 173 AHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDY 232
           A+  + G+ + LSEQQLVDC    +       + GCNGGL + AFEYI   GG++ E+ Y
Sbjct: 178 AYVQAFGKAIFLSEQQLVDCARAYN-------NFGCNGGLPSQAFEYIKANGGLDTEEAY 230

Query: 233 PYTGTDGGSCKFDKSKIAAAV---SNFSVISSDEDQMAANLVKHGPLAVGINAV-WMQTY 288
           PYTG D G CKF    I   V    N ++ + DE + A   V+  P++V    V   + Y
Sbjct: 231 PYTGVD-GVCKFSSENIGVQVLDSVNITLGAEDELKDAVAFVR--PVSVAFEVVSGFRLY 287

Query: 289 IGGVSCPYICGKY---LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKI 345
             GV     CG     ++H V+ VGYG          + PYW+IKNSWG +WG+NGY+K+
Sbjct: 288 KSGVYTSDTCGNTPMDVNHAVVAVGYGVE-------NDVPYWLIKNSWGADWGDNGYFKM 340

Query: 346 CMGRNVCGVDSMVS 359
            MG+N+CGV +  S
Sbjct: 341 EMGKNMCGVATCAS 354


>gi|20147096|gb|AAM09951.1| 49 kDa cysteine proteinase Cysp1 [Cryptobia salmositica]
          Length = 428

 Score =  225 bits (573), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 126/321 (39%), Positives = 179/321 (55%), Gaps = 32/321 (9%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           F  FK+  ++ YA+ +E   RF +F  N+++A      +P A  G  +F+D+T  EF+ +
Sbjct: 10  FGNFKAAHARNYASPDEERKRFEIFAGNMKKAAVLNRKNPMATFGPNEFADMTSEEFQTR 69

Query: 113 F----LGLNRRLRLPADAQKAPILPTND-LPTDFDWRDHGAVTGVKDQGACGSCWSFSAT 167
                     + R P + +          +    DWR  GAVT VK+QGACGSCWSFS T
Sbjct: 70  HNAARHYAAAKARPPKNTKTFTAEEIKAAVGQQIDWRLKGAVTPVKNQGACGSCWSFSTT 129

Query: 168 GALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA--GG 225
           G +EG H ++TG+LV++SEQ+LV CD           D GCNGGLM++AF +++ A  G 
Sbjct: 130 GNIEGQHAIATGQLVAVSEQELVSCD---------PIDDGCNGGLMDNAFGWLISAHKGQ 180

Query: 226 VEREKDYPYTGTDG----GSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGIN 281
           +  E +YPY   +G     S   +   + A +S F  I+  E+ MAA + KHGPL++G++
Sbjct: 181 IATEANYPYVSGNGIVPACSSSPESKPVGATISAFQDIARTEEDMAAFVFKHGPLSIGVD 240

Query: 282 AVWMQTYIGGVS--CPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGE 339
           A   Q+Y GG+   CP      +DHGVLIVG+  +          PYWIIKNSW  NWGE
Sbjct: 241 ASTWQSYAGGIMSYCPQ---DQIDHGVLIVGFDDTA-------STPYWIIKNSWTANWGE 290

Query: 340 NGYYKICMGRNVCGVDSMVSS 360
            GY ++  G N CG+ S  SS
Sbjct: 291 EGYIRVAKGSNQCGLTSHPSS 311


>gi|56553473|gb|AAV97878.1| recombinant cysteine protease [Cloning vector pQ-CPB]
          Length = 335

 Score =  225 bits (573), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 127/311 (40%), Positives = 170/311 (54%), Gaps = 30/311 (9%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           F  FK  + + YAT +E   R   F+ NL   +  Q  +P A  G+TKF DL+  EF  +
Sbjct: 30  FEEFKQTYQRVYATLDEEQQRLANFQRNLELMREHQANNPHARFGITKFFDLSEEEFATR 89

Query: 113 FLG----LNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATG 168
           +L       +  +  +   +      +  P   DWR+ GAVT VKDQG CGSCW+FSA G
Sbjct: 90  YLSGATHFAKAKKFASQYYRKVGADLSTAPAAVDWREKGAVTPVKDQGMCGSCWAFSAIG 149

Query: 169 ALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYIL--KAGGV 226
            +E   +L+T  L+SLSEQ+LV CD           D GCNGGLM  AF+++L  + G V
Sbjct: 150 NIESKWYLATHSLISLSEQELVSCD---------DVDEGCNGGLMGQAFDWLLNNRNGAV 200

Query: 227 EREKDYPYTGTDGGSCKFDKSK---IAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAV 283
                YPY   +G   +  +S    I A +     I S+ED MAA L  +GP+A+ ++A 
Sbjct: 201 YTGASYPYVSGNGSVPECSESSDLVIGAYIDGHVTIESNEDTMAAWLAANGPIAIAVDAS 260

Query: 284 WMQTYIGGV--SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENG 341
              +Y GGV  SC    GK L+HGVL+VGY  +G       E PYW+IKNSWGENWGE G
Sbjct: 261 AFMSYTGGVLTSCD---GKQLNHGVLLVGYNMTG-------EVPYWVIKNSWGENWGEKG 310

Query: 342 YYKICMGRNVC 352
           Y ++  G N C
Sbjct: 311 YVRVRKGTNEC 321


>gi|26452046|dbj|BAC43113.1| putative cysteine proteinase RD21A precursor [Arabidopsis thaliana]
          Length = 362

 Score =  224 bits (572), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 131/312 (41%), Positives = 183/312 (58%), Gaps = 33/312 (10%)

Query: 62  KTYATQEEHDYRFRVFKANLRRA-KRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRL 120
           K Y    E + RF++FK NL+   +   + D T   G+T+F+DLT  EFR  +L   +++
Sbjct: 53  KNYNGLGEKERRFKIFKDNLKFVDEHNSVPDRTFEVGLTRFADLTNEEFRAIYL--RKKM 110

Query: 121 RLPADAQKAP--ILPTND-LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLS 177
               D+ K    +    D LP + DWR +GAV  VKDQG CGSCW+FSA GA+EG + ++
Sbjct: 111 ERNKDSVKTERYLYKEGDVLPDEVDWRANGAVVSVKDQGNCGSCWAFSAVGAVEGINQIT 170

Query: 178 TGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGT 237
           TGEL+SLSEQ+LVDCD        G  ++GC+GG+MN AFE+I+K GG+E ++DYPY   
Sbjct: 171 TGELISLSEQELVDCDR-------GFVNAGCDGGIMNYAFEFIMKNGGIETDQDYPYNAN 223

Query: 238 DGGSCKFDKSKIAAAVS--NFSVISSDEDQMAANLVKHGPLAVGINAV--WMQTYIGGVS 293
           D G C  DK+     V+   +  +  D+++     V H P++V I A     Q Y  GV 
Sbjct: 224 DLGLCNADKNNNTRVVTIDGYEDVPRDDEKSLKKAVAHQPVSVAIEASSQAFQLYKSGVM 283

Query: 294 CPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNV-- 351
               CG  LDHGV++VGYGS+         + YWII+NSWG NWG++GY K  + RN+  
Sbjct: 284 TG-TCGISLDHGVVVVGYGST-------SGEDYWIIRNSWGLNWGDSGYVK--LQRNIDD 333

Query: 352 ----CGVDSMVS 359
               CG+  M S
Sbjct: 334 PFGKCGIAMMPS 345


>gi|23397070|gb|AAN31820.1| putative cysteine proteinase AALP [Arabidopsis thaliana]
          Length = 358

 Score =  224 bits (572), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 143/371 (38%), Positives = 201/371 (54%), Gaps = 35/371 (9%)

Query: 3   RLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDG----EQSEDHLLNAEHH---FSL 55
           + ILSS++L++L +  A+A    D+   IR V  SDG    E+S   +L    H   F+ 
Sbjct: 4   KTILSSVVLVVLFAASAAANIGFDESNPIRMV--SDGLREVEESVSQILGQSRHVLSFAR 61

Query: 56  FKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLG 115
           F  ++ K Y   EE   RF +FK NL   +       +   GV +F+DLT  EF+R  LG
Sbjct: 62  FTHRYGKKYQNVEEMKLRFSIFKENLDLIRSTNKKGLSYKLGVNQFADLTWQEFQRTKLG 121

Query: 116 LNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHF 175
             +     A  + +  +    LP   DWR+ G V+ VKDQG CGSCW+FS TGALE A+ 
Sbjct: 122 AAQNC--SATLKGSHKVTEAALPETKDWREDGIVSPVKDQGGCGSCWTFSTTGALEAAYH 179

Query: 176 LSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYT 235
            + G+ +SLSEQQLVDC    +       + GCNGGL + AFEYI   GG++ EK YPYT
Sbjct: 180 QAFGKGISLSEQQLVDCAGAFN-------NYGCNGGLPSQAFEYIKSNGGLDTEKAYPYT 232

Query: 236 GTDGGSCKFDKSKIAAAV---SNFSVISSDEDQMAANLVKHGPLAVGINAVW-MQTYIGG 291
           G D  +CKF    +   V    N ++ + DE + A  LV+  P+++    +   + Y  G
Sbjct: 233 GKD-ETCKFSAENVGVQVLNSVNITLGAEDELKHAVGLVR--PVSIAFEVIHSFRLYKSG 289

Query: 292 VSCPYICGKY---LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMG 348
           V     CG     ++H VL VGYG            PYW+IKNSWG +WG+ GY+K+ MG
Sbjct: 290 VYTDSHCGSTPMDVNHAVLAVGYGVEDGV-------PYWLIKNSWGADWGDKGYFKMEMG 342

Query: 349 RNVCGVDSMVS 359
           +N+CG+ +  S
Sbjct: 343 KNMCGIATCAS 353


>gi|77628008|ref|NP_001029282.1| cathepsin F precursor [Rattus norvegicus]
 gi|71681040|gb|AAH99780.1| Cathepsin F [Rattus norvegicus]
 gi|149062007|gb|EDM12430.1| cathepsin F, isoform CRA_a [Rattus norvegicus]
 gi|159895422|gb|ABX09995.1| cathepsin F [Rattus norvegicus]
          Length = 462

 Score =  224 bits (572), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 136/323 (42%), Positives = 190/323 (58%), Gaps = 24/323 (7%)

Query: 43  EDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKF 101
           +D  +     F  F + +++TY ++EE  +R  VF  N+ RA++ Q LD  TA +G+TKF
Sbjct: 155 QDFSVKMATLFKDFMTTYNRTYESREEAQWRLTVFARNMIRAQKIQALDRGTAQYGITKF 214

Query: 102 SDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDL-PTDFDWRDHGAVTGVKDQGACGS 160
           SDLT  EF   +L  N  L+  +  + +     NDL P ++DWR  GAVT VKDQG CGS
Sbjct: 215 SDLTEEEFHTIYL--NPLLQKESGGKMSLAKSINDLAPPEWDWRKKGAVTEVKDQGMCGS 272

Query: 161 CWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYI 220
           CW+FS TG +EG  FL+ G L+SLSEQ+L+DCD           D  C GGL ++A+  I
Sbjct: 273 CWAFSVTGNVEGQWFLNRGTLLSLSEQELLDCD---------KMDKACMGGLPSNAYTAI 323

Query: 221 LKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGI 280
              GG+E E DY Y G    +C F        +++   +S DE+++AA L + GP++V I
Sbjct: 324 KNLGGLETEDDYGYQG-HVQACNFSTQMAKVYINDSVELSRDENKIAAWLAQKGPISVAI 382

Query: 281 NAVWMQTYIGGVSCPY--ICGK-YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENW 337
           NA  MQ Y  G++ P+  +C   ++DH VL+VGYG+           PYW IKNSWG +W
Sbjct: 383 NAFGMQFYRHGIAHPFRPLCSPWFIDHAVLLVGYGNRS-------NIPYWAIKNSWGRDW 435

Query: 338 GENGYYKICMGRNVCGVDSMVSS 360
           GE GYY +  G   CGV++M SS
Sbjct: 436 GEEGYYYLYRGSGACGVNTMASS 458


>gi|343471272|emb|CCD16264.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 447

 Score =  224 bits (572), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 127/313 (40%), Positives = 173/313 (55%), Gaps = 32/313 (10%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEF 109
           +  F+ FK K+S++Y    E  +RFR+FK ++ RAK     +P A  GVT+FSD++P E 
Sbjct: 38  QQQFAAFKQKYSRSYKDATEEAFRFRMFKQSMERAKEEAAANPYATFGVTQFSDMSPEEL 97

Query: 110 RRQFLGLNR----RLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFS 165
           R  +L   +     L+ P   +K   + T   P   DWR  GAVT VKDQ  CGSCW+FS
Sbjct: 98  RATYLNGAKYYAAALKRP---RKVVNVSTGKAPPAVDWRKKGAVTPVKDQRKCGSCWAFS 154

Query: 166 ATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA-- 223
           ATG +EG   ++  EL SLSEQ LV CD+          D GC GGLM+ A ++I+ +  
Sbjct: 155 ATGNIEGQWKVAGHELTSLSEQMLVSCDN---------MDDGCQGGLMDRALKWIVSSNK 205

Query: 224 GGVEREKDYPYTGTDGG--SCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGIN 281
           G V  E+ YPY  TDG    C      + A +S    +  DE+ +A  L K+GP+A+ ++
Sbjct: 206 GNVFTEESYPYDSTDGDVPPCNMSGKVVGAKISGHINLPKDENAIAEWLAKNGPVAIAVD 265

Query: 282 AVWMQTYIGGV--SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGE 339
           A     Y GGV  SC       L+H VL+VGY  +        + PYWIIKNSWG+ WGE
Sbjct: 266 ASSFLDYKGGVLTSCS---SDALNHDVLLVGYDDTS-------KPPYWIIKNSWGKKWGE 315

Query: 340 NGYYKICMGRNVC 352
            GY ++  G N C
Sbjct: 316 EGYIRVEKGTNQC 328


>gi|410974700|ref|XP_003993781.1| PREDICTED: cathepsin F [Felis catus]
          Length = 459

 Score =  224 bits (572), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 143/344 (41%), Positives = 197/344 (57%), Gaps = 28/344 (8%)

Query: 25  NDDDAMIRQVVP--SDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLR 82
           +D +  +  V+P  +     +D  +     F  F + +++TY TQEE  +R  VF  N+ 
Sbjct: 132 DDRNETLSSVLPLLNKDPLPQDFSVKMASIFKEFVTTYNRTYGTQEEAQWRLSVFSNNMV 191

Query: 83  RAKRRQLLDP-TAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTND-LPTD 140
           RA++ Q LD  TA +G+TKFSDLT  EFR  +L  N  L+   +          D  P +
Sbjct: 192 RAQKIQALDRGTAQYGITKFSDLTEEEFRAIYL--NPLLKENRNKMMHLAKSIGDHAPPE 249

Query: 141 FDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEE 200
           +DWR  GAVT VK+QG CGSCW+FS TG +EG  FL  G+L+SLSEQ+L+DCD       
Sbjct: 250 WDWRTKGAVTNVKNQGMCGSCWAFSVTGNVEGQWFLKQGDLLSLSEQELLDCD------- 302

Query: 201 SGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVIS 260
               D  C GGL ++A+  I   GG+E E DY Y+G    +C F   K    +++   +S
Sbjct: 303 --KVDKACLGGLPSNAYLAIKNLGGLETEDDYSYSG-HLQTCSFSAKKAKVYINDSVELS 359

Query: 261 SDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPY--ICGKYL-DHGVLIVGYGS-SGF 316
            +E ++AA L K GP++V INA  MQ Y  G+S P   +C  +L DH VL+VGYG+ SG 
Sbjct: 360 QNEQKLAAWLAKKGPISVAINAFGMQFYRRGISHPLRPLCSPWLIDHAVLLVGYGNRSGI 419

Query: 317 APIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSS 360
                   P+W IKNSWG +WGE GYY +  G   CGV++M SS
Sbjct: 420 --------PFWAIKNSWGTDWGEEGYYYLYRGSGACGVNAMASS 455


>gi|355751926|gb|EHH56046.1| Cathepsin F, partial [Macaca fascicularis]
          Length = 381

 Score =  224 bits (572), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 139/313 (44%), Positives = 184/313 (58%), Gaps = 24/313 (7%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTPSEFRR 111
           F  F   +++TY ++EE  +R  VF  N+ RA++ Q LD  TA +GVTKFSDLT  EFR 
Sbjct: 84  FKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEEEFRT 143

Query: 112 QFLGLNRRLRLPADAQKAPILPTNDL-PTDFDWRDHGAVTGVKDQGACGSCWSFSATGAL 170
            +L  N  LR     +        DL P ++DWR  GAVT VKDQG CGSCW+FS TG +
Sbjct: 144 IYL--NPLLREEPGNKMKQAKSVGDLAPPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNV 201

Query: 171 EGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREK 230
           EG  FL+ G L+SLSEQ+L+DCD           D  C GGL ++A+  I   GG+E E 
Sbjct: 202 EGQWFLNQGTLLSLSEQELLDCDK---------MDKACMGGLPSNAYSAIKNLGGLETED 252

Query: 231 DYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIG 290
           DY Y G    +C F   K    +++   +S +E ++AA L K GP++V INA  MQ Y  
Sbjct: 253 DYSYRG-HMQACNFSAEKAKVYINDSVELSQNEQKLAAWLAKKGPISVAINAFGMQFYRH 311

Query: 291 GVSCPY--ICGKYL-DHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICM 347
           G+S P   +C  +L DH VL+VGYG+         + P+W IKNSWG +WGE GYY +  
Sbjct: 312 GISRPLRPLCSPWLIDHAVLLVGYGNRS-------DIPFWAIKNSWGTDWGEKGYYYLHR 364

Query: 348 GRNVCGVDSMVSS 360
           G   CGV++M SS
Sbjct: 365 GSGACGVNTMASS 377


>gi|255567869|ref|XP_002524912.1| cysteine protease, putative [Ricinus communis]
 gi|223535747|gb|EEF37409.1| cysteine protease, putative [Ricinus communis]
          Length = 366

 Score =  224 bits (572), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 128/310 (41%), Positives = 180/310 (58%), Gaps = 32/310 (10%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRA-KRRQLLDPTAVHGVTKFSDLTPSEFRR 111
           ++ + +K SKTY    E + RF +FK NLR   +     + T   G+T+F+DLT  E+R 
Sbjct: 48  YNWWLAKHSKTYNKLGEREKRFEIFKNNLRFIDEHNNSKNRTYKVGLTRFADLTNEEYRA 107

Query: 112 QFLGLN-----RRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSA 166
           +FLG       R ++    +Q+      + LP   DWR  GAV+ +KDQG+CGSCW+FS 
Sbjct: 108 KFLGTKSDPKRRLMKSKNPSQRYAFKAGDVLPESIDWRQSGAVSAIKDQGSCGSCWAFST 167

Query: 167 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGV 226
             A+EG + + TGEL+SLSEQ+LVDCD         S ++GCNGGLM++AF++I+  GG+
Sbjct: 168 IAAVEGVNKIVTGELISLSEQELVDCDR--------SYNAGCNGGLMDNAFQFIINNGGI 219

Query: 227 EREKDYPYTGTDGGSCKFDKSKI---AAAVSNFSVISSDEDQMAANLVKHGPLAVGINAV 283
           + +KDYPY   DG   K D +K+   A  +  F  + + ++      V H P++V I A 
Sbjct: 220 DTDKDYPYQAVDG---KCDTTKVKNKAVTIDGFEDVMAFDEMALQKAVAHQPVSVAIEAS 276

Query: 284 WM--QTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENG 341
            M  Q Y  GV     CG  LDHGV+IVGYG+            YW+++NSWG +WGENG
Sbjct: 277 GMALQFYQSGVFTGE-CGSALDHGVVIVGYGTEDGI-------DYWLVRNSWGRDWGENG 328

Query: 342 YYKICMGRNV 351
           Y K  M RNV
Sbjct: 329 YIK--MQRNV 336


>gi|168006315|ref|XP_001755855.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162693174|gb|EDQ79528.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 454

 Score =  224 bits (571), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 127/302 (42%), Positives = 172/302 (56%), Gaps = 20/302 (6%)

Query: 52  HFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRR 111
            F  +  K  K Y++ EEH +R+ V+K NL   +R    + +   G+TKF+D+T  EFRR
Sbjct: 45  QFGAWAHKHGKVYSSLEEHAHRYMVWKDNLEYIQRHSEKNRSYWLGLTKFADITNDEFRR 104

Query: 112 QFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALE 171
           Q+ G        +  +       ++ P   DWR  GAVT VKDQG+CGSCW+FSA G++E
Sbjct: 105 QYTGTRIDRSKRSKRKTGFRYADSEAPESVDWRKKGAVTTVKDQGSCGSCWAFSAIGSVE 164

Query: 172 GAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKD 231
           G + + TGE VSLSEQ+LVDCD E         + GCNGGLM+ AF++IL+ GG++ E D
Sbjct: 165 GINAIRTGEAVSLSEQELVDCDLE--------YNQGCNGGLMDYAFDFILENGGIDTEND 216

Query: 232 YPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYI 289
           YPY G DG      K+     +  +  +  ++++     V   P++V I A     Q Y 
Sbjct: 217 YPYKGLDGRCDNNKKNAHVVTIDGYEDVPENDEEALKKAVAGQPVSVAIEAGGRDFQLYS 276

Query: 290 GGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR 349
           GGV     CG  LDHGVL VGYGS G          YWI+KNSWGE WGE+GY +  M R
Sbjct: 277 GGVFTGE-CGTDLDHGVLAVGYGSEG-------SLDYWIVKNSWGEYWGESGYLR--MQR 326

Query: 350 NV 351
           N+
Sbjct: 327 NI 328


>gi|8468605|gb|AAF75546.1| cruzipain [Trypanosoma cruzi]
          Length = 467

 Score =  224 bits (571), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 138/368 (37%), Positives = 185/368 (50%), Gaps = 53/368 (14%)

Query: 4   LILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKT 63
           L L+++L+++   V A+  +++ ++ +  Q                   F+ FK K  + 
Sbjct: 8   LSLAAVLVVMACLVPAATASLHAEETLASQ-------------------FAEFKQKHGRV 48

Query: 64  YATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ-------FLGL 116
           Y +  E  +R  VF+ NL  A+     +P A  GVT FSDLT  EFR +       F   
Sbjct: 49  YESAAEEAFRLSVFRENLFLARLHAAANPHATFGVTPFSDLTREEFRSRYHNGAAHFAAA 108

Query: 117 NRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFL 176
             R R+P + +          P   DWR  GAVT VKDQG CGSCW+FSA G +E   FL
Sbjct: 109 QERARVPVNVEVV------GAPAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFL 162

Query: 177 STGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA--GGVEREKDYPY 234
           +   L +LSEQ LV CD           DSGC GGLMN+AF +I++   G V  E  YPY
Sbjct: 163 AGHPLTNLSEQMLVSCDKT---------DSGCGGGLMNNAFGWIVQENNGAVYTENSYPY 213

Query: 235 TGTDGGS--CKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGV 292
              +G S  C      + A ++    +  DE Q+AA L  +GP+AV ++A    TY GGV
Sbjct: 214 ASGEGISPPCTTSGHTVGATITGHVELPQDEAQIAAWLAVNGPVAVAVDASSWMTYTGGV 273

Query: 293 SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVC 352
               +  + LDHGVL+VGY  S          PYWIIKNSW   WGE+GY +I  G N C
Sbjct: 274 MTSCV-SEQLDHGVLLVGYNDSAAV-------PYWIIKNSWTAQWGEDGYIRIAKGSNQC 325

Query: 353 GVDSMVSS 360
            V    SS
Sbjct: 326 LVKEEASS 333


>gi|355566270|gb|EHH22649.1| Cathepsin F [Macaca mulatta]
          Length = 484

 Score =  224 bits (571), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 139/314 (44%), Positives = 184/314 (58%), Gaps = 24/314 (7%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTPSEFRR 111
           F  F   +++TY ++EE  +R  VF  N+ RA++ Q LD  TA +GVTKFSDLT  EFR 
Sbjct: 187 FKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEEEFRT 246

Query: 112 QFLGLNRRLRLPADAQKAPILPTNDL-PTDFDWRDHGAVTGVKDQGACGSCWSFSATGAL 170
            +L  N  LR     +        DL P ++DWR  GAVT VKDQG CGSCW+FS TG +
Sbjct: 247 IYL--NPLLREEPGNKMKQAKSVGDLAPPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNV 304

Query: 171 EGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREK 230
           EG  FL+ G L+SLSEQ+L+DCD           D  C GGL ++A+  I   GG+E E 
Sbjct: 305 EGQWFLNQGTLLSLSEQELLDCDK---------MDKACMGGLPSNAYSAIKNLGGLETED 355

Query: 231 DYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIG 290
           DY Y G    +C F   K    +++   +S +E ++AA L K GP++V INA  MQ Y  
Sbjct: 356 DYSYRG-HMQACNFSAEKAKVYINDSVELSQNEQKLAAWLAKKGPISVAINAFGMQFYRH 414

Query: 291 GVSCPY--ICGKYL-DHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICM 347
           G+S P   +C  +L DH VL+VGYG+         + P+W IKNSWG +WGE GYY +  
Sbjct: 415 GISRPLRPLCSPWLIDHAVLLVGYGNR-------SDIPFWAIKNSWGTDWGEKGYYYLHR 467

Query: 348 GRNVCGVDSMVSSV 361
           G   CGV++M SS 
Sbjct: 468 GSGACGVNTMASSA 481


>gi|402892718|ref|XP_003909556.1| PREDICTED: cathepsin F [Papio anubis]
          Length = 460

 Score =  224 bits (571), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 139/313 (44%), Positives = 184/313 (58%), Gaps = 24/313 (7%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTPSEFRR 111
           F  F   +++TY ++EE  +R  VF  N+ RA++ Q LD  TA +GVTKFSDLT  EFR 
Sbjct: 163 FKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEEEFRT 222

Query: 112 QFLGLNRRLRLPADAQKAPILPTNDL-PTDFDWRDHGAVTGVKDQGACGSCWSFSATGAL 170
            +L  N  LR     +        DL P ++DWR  GAVT VKDQG CGSCW+FS TG +
Sbjct: 223 IYL--NPLLREEPGNKMKQAKSVGDLAPPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNV 280

Query: 171 EGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREK 230
           EG  FL+ G L+SLSEQ+L+DCD           D  C GGL ++A+  I   GG+E E 
Sbjct: 281 EGQWFLNQGTLLSLSEQELLDCDK---------MDKACMGGLPSNAYSAIKNLGGLETED 331

Query: 231 DYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIG 290
           DY Y G    +C F   K    +++   +S +E ++AA L K GP++V INA  MQ Y  
Sbjct: 332 DYSYRG-HMQACNFSAEKAKVYINDSVELSQNEQKLAAWLAKRGPISVAINAFGMQFYRH 390

Query: 291 GVSCPY--ICGKYL-DHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICM 347
           G+S P   +C  +L DH VL+VGYG+         + P+W IKNSWG +WGE GYY +  
Sbjct: 391 GISRPLRPLCSPWLIDHAVLLVGYGNR-------SDIPFWAIKNSWGTDWGEKGYYYLHR 443

Query: 348 GRNVCGVDSMVSS 360
           G   CGV++M SS
Sbjct: 444 GSGACGVNTMASS 456


>gi|4826565|emb|CAB42884.1| cathepsin F [Mus musculus]
          Length = 462

 Score =  224 bits (571), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 135/324 (41%), Positives = 191/324 (58%), Gaps = 24/324 (7%)

Query: 43  EDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKF 101
           +D  +     F  F + +++TY ++EE  +R  VF  N+ RA++ Q LD  TA +G+TKF
Sbjct: 155 QDFSVKMAPLFKDFMTTYNRTYESREEAQWRLTVFARNMIRAQKIQALDRGTAQYGITKF 214

Query: 102 SDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDL-PTDFDWRDHGAVTGVKDQGACGS 160
           SDLT  EF   +L  N  L+  +  + +P    NDL P ++DWR  GAVT VK+QG CGS
Sbjct: 215 SDLTEEEFHTIYL--NPLLQKESGRKMSPAKSINDLAPPEWDWRKKGAVTEVKNQGMCGS 272

Query: 161 CWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYI 220
           CW+FS TG +EG  FL+ G L+SLSEQ+L+DCD           D  C GGL ++A+  I
Sbjct: 273 CWAFSVTGNVEGQWFLNRGTLLSLSEQELLDCDK---------VDKACLGGLPSNAYAAI 323

Query: 221 LKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGI 280
              GG+E E DY Y G    +C F        +++   +S +E+++AA L + GP++V I
Sbjct: 324 KNLGGLETEDDYGYQG-HVQTCNFSAQMAKVYINDSVELSRNENKIAAWLAQKGPISVAI 382

Query: 281 NAVWMQTYIGGVSCPY--ICGK-YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENW 337
           NA  MQ Y  G++ P+  +C   ++DH VL+VGYG+           PYW IKNSWG +W
Sbjct: 383 NAFGMQFYRHGIAHPFRPLCSPWFIDHAVLLVGYGNR-------SNIPYWAIKNSWGSDW 435

Query: 338 GENGYYKICMGRNVCGVDSMVSSV 361
           GE GYY +  G   CGV++M SS 
Sbjct: 436 GEEGYYYLYRGSGACGVNTMASSA 459


>gi|391340505|ref|XP_003744580.1| PREDICTED: digestive cysteine proteinase 1-like [Metaseiulus
           occidentalis]
          Length = 469

 Score =  224 bits (571), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 142/361 (39%), Positives = 190/361 (52%), Gaps = 51/361 (14%)

Query: 5   ILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTY 64
           +L+  + L ++SVLA  VAV  D                  L N EH    FK  F KTY
Sbjct: 140 VLTIEMRLYIASVLALVVAVGAD------------------LTNFEH----FKEHFGKTY 177

Query: 65  ATQEEHDYRFRVFKANLRRAKRRQLLDPTA---VHGVTKFSDLTPSEFRRQFLGLNRRLR 121
              +EH  R  +F+ NL   ++       +     G+T+F+D++ +EFR+ +LGL     
Sbjct: 178 EG-DEHALRQGIFQRNLAHIEKFNAEKAASRGYTLGITQFADMSTAEFRQTYLGLRMNAS 236

Query: 122 LPADA---QKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLST 178
             A     Q+  +    DLP   DWRD GAV+ VKDQG CGSCW+FS +GA+EG HFL  
Sbjct: 237 TIAKLRKLQREVVADDRDLPEAVDWRDKGAVSPVKDQGQCGSCWAFSTSGAIEGQHFLKN 296

Query: 179 GELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTD 238
           GEL+SLSEQQ+VDC            D GCNGG    A EY+   GG+E E  YPY G  
Sbjct: 297 GELLSLSEQQMVDCSW---------LDFGCNGGQPMLAMEYVRFNGGLELETAYPYKGV- 346

Query: 239 GGSCKFDKSKIAAAVSNFSVIS-SDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCP 295
           GGSC  DK   AA ++ F +     E  +   + K GP++VG++A     Q Y  G+  P
Sbjct: 347 GGSCHSDKKSAAAKITGFWMAGFYSESALQKAVAKVGPISVGMDASGEDFQHYKSGIYNP 406

Query: 296 YICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCG 353
             C    LDH VL VGYG+S        +  YW++KNSW  +WGE GY+K+   + N CG
Sbjct: 407 ESCSSIGLDHAVLAVGYGTS-------DDGDYWLVKNSWNTSWGEKGYFKLPRNKGNKCG 459

Query: 354 V 354
           +
Sbjct: 460 I 460


>gi|113819972|gb|AAH04054.2| Ctsf protein [Mus musculus]
          Length = 332

 Score =  224 bits (571), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 134/314 (42%), Positives = 188/314 (59%), Gaps = 24/314 (7%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTPSEFRR 111
           F  F + +++TY ++EE  +R  VF  N+ RA++ Q LD  TA +G+TKFSDLT  EF  
Sbjct: 35  FKDFMTTYNRTYESREEAQWRLTVFARNMIRAQKIQALDRGTAQYGITKFSDLTEEEFHT 94

Query: 112 QFLGLNRRLRLPADAQKAPILPTNDL-PTDFDWRDHGAVTGVKDQGACGSCWSFSATGAL 170
            +L  N  L+  +  + +P    NDL P ++DWR  GAVT VK+QG CGSCW+FS TG +
Sbjct: 95  IYL--NPLLQKESGRKMSPAKSINDLAPPEWDWRKKGAVTEVKNQGMCGSCWAFSVTGNV 152

Query: 171 EGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREK 230
           EG  FL+ G L+SLSEQ+L+DCD           D  C GGL ++A+  I   GG+E E 
Sbjct: 153 EGQWFLNRGTLLSLSEQELLDCD---------KVDKACLGGLPSNAYAAIKNLGGLETED 203

Query: 231 DYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIG 290
           DY Y G    +C F        +++   +S +E+++AA L + GP++V INA  MQ Y  
Sbjct: 204 DYGYQG-HVQTCNFSAQMAKVYINDSVELSRNENKIAAWLAQKGPISVAINAFGMQFYRH 262

Query: 291 GVSCPY--ICGK-YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICM 347
           G++ P+  +C   ++DH VL+VGYG+           PYW IKNSWG +WGE GYY +  
Sbjct: 263 GIAHPFRPLCSPWFIDHAVLLVGYGNR-------SNIPYWAIKNSWGSDWGEEGYYYLYR 315

Query: 348 GRNVCGVDSMVSSV 361
           G   CGV++M SS 
Sbjct: 316 GSGACGVNTMASSA 329


>gi|9845246|ref|NP_063914.1| cathepsin F precursor [Mus musculus]
 gi|12643321|sp|Q9R013.1|CATF_MOUSE RecName: Full=Cathepsin F; Flags: Precursor
 gi|6467384|gb|AAF13147.1|AF136280_1 cathepsin F precursor [Mus musculus]
 gi|7141165|gb|AAF37228.1|AF217224_1 cathepsin F [Mus musculus]
 gi|26344728|dbj|BAC36013.1| unnamed protein product [Mus musculus]
 gi|37589148|gb|AAH58758.1| Cathepsin F [Mus musculus]
 gi|148701127|gb|EDL33074.1| cathepsin F, isoform CRA_b [Mus musculus]
          Length = 462

 Score =  224 bits (571), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 135/324 (41%), Positives = 191/324 (58%), Gaps = 24/324 (7%)

Query: 43  EDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKF 101
           +D  +     F  F + +++TY ++EE  +R  VF  N+ RA++ Q LD  TA +G+TKF
Sbjct: 155 QDFSVKMAPLFKDFMTTYNRTYESREEAQWRLTVFARNMIRAQKIQALDRGTAQYGITKF 214

Query: 102 SDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDL-PTDFDWRDHGAVTGVKDQGACGS 160
           SDLT  EF   +L  N  L+  +  + +P    NDL P ++DWR  GAVT VK+QG CGS
Sbjct: 215 SDLTEEEFHTIYL--NPLLQKESGRKMSPAKSINDLAPPEWDWRKKGAVTEVKNQGMCGS 272

Query: 161 CWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYI 220
           CW+FS TG +EG  FL+ G L+SLSEQ+L+DCD           D  C GGL ++A+  I
Sbjct: 273 CWAFSVTGNVEGQWFLNRGTLLSLSEQELLDCDK---------VDKACLGGLPSNAYAAI 323

Query: 221 LKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGI 280
              GG+E E DY Y G    +C F        +++   +S +E+++AA L + GP++V I
Sbjct: 324 KNLGGLETEDDYGYQG-HVQTCNFSAQMAKVYINDSVELSRNENKIAAWLAQKGPISVAI 382

Query: 281 NAVWMQTYIGGVSCPY--ICGK-YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENW 337
           NA  MQ Y  G++ P+  +C   ++DH VL+VGYG+           PYW IKNSWG +W
Sbjct: 383 NAFGMQFYRHGIAHPFRPLCSPWFIDHAVLLVGYGNR-------SNIPYWAIKNSWGSDW 435

Query: 338 GENGYYKICMGRNVCGVDSMVSSV 361
           GE GYY +  G   CGV++M SS 
Sbjct: 436 GEEGYYYLYRGSGACGVNTMASSA 459


>gi|338712411|ref|XP_001491536.3| PREDICTED: cathepsin F [Equus caballus]
          Length = 459

 Score =  224 bits (571), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 134/312 (42%), Positives = 185/312 (59%), Gaps = 22/312 (7%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTPSEFRR 111
           F  F + +++TY T+EE  +R  +F +N+ RA++ Q LD  TA +GVTKFSDLT  EFR 
Sbjct: 162 FKHFVTTYNRTYETKEEAQWRMSIFASNMVRAQKIQALDRGTAQYGVTKFSDLTEEEFRT 221

Query: 112 QFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALE 171
            +L    +       ++A  +  +  P ++DWR  GAVT VKDQG CGSCW+FS TG +E
Sbjct: 222 IYLNPLLKEEPGVKMRRAKSV-GDSAPPEWDWRSKGAVTEVKDQGMCGSCWAFSVTGNVE 280

Query: 172 GAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKD 231
           G  FL+ G L+SLSEQ+L+DCD           D  C GGL ++A+  I   GG+E E D
Sbjct: 281 GQWFLNRGALLSLSEQELLDCD---------KVDKACMGGLPSNAYSAIKTLGGLETEDD 331

Query: 232 YPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGG 291
           Y Y G    +C F   K    +++   ++ +E ++AA L K GP++V INA  MQ Y  G
Sbjct: 332 YSYHG-HLQACSFSAEKAKVYINDSVELTKNEQKLAAWLAKKGPISVAINAFGMQFYRHG 390

Query: 292 VSCPY--ICGKYL-DHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMG 348
           +S P   +C  +L DH VL+VGYG+           P+W IKNSWG +WGE GYY +  G
Sbjct: 391 ISHPLRPLCSPWLIDHAVLLVGYGNRSAV-------PFWAIKNSWGTDWGEEGYYYLYRG 443

Query: 349 RNVCGVDSMVSS 360
              CGV++M SS
Sbjct: 444 SGACGVNTMASS 455


>gi|11066228|gb|AAG28508.1|AF197480_1 cathepsin F [Mus musculus]
          Length = 462

 Score =  224 bits (570), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 135/324 (41%), Positives = 191/324 (58%), Gaps = 24/324 (7%)

Query: 43  EDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKF 101
           +D  +     F  F + +++TY ++EE  +R  VF  N+ RA++ Q LD  TA +G+TKF
Sbjct: 155 QDFSVKMAPLFKDFMTTYNRTYESREEAQWRLTVFARNMIRAQKIQALDRGTAQYGITKF 214

Query: 102 SDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDL-PTDFDWRDHGAVTGVKDQGACGS 160
           SDLT  EF   +L  N  L+  +  + +P    NDL P ++DWR  GAVT VK+QG CGS
Sbjct: 215 SDLTEEEFHTIYL--NPLLQKESGRKMSPAKSINDLAPPEWDWRKKGAVTEVKNQGMCGS 272

Query: 161 CWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYI 220
           CW+FS TG +EG  FL+ G L+SLSEQ+L+DCD           D  C GGL ++A+  I
Sbjct: 273 CWAFSVTGNVEGQWFLNRGTLLSLSEQELLDCDK---------VDKACLGGLPSNAYAAI 323

Query: 221 LKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGI 280
              GG+E E DY Y G    +C F        +++   +S +E+++AA L + GP++V I
Sbjct: 324 KNLGGLETEDDYGYQG-HVQTCNFSAQMAKVYINDSVELSRNENKIAAWLAQKGPISVAI 382

Query: 281 NAVWMQTYIGGVSCPY--ICGK-YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENW 337
           NA  MQ Y  G++ P+  +C   ++DH VL+VGYG+           PYW IKNSWG +W
Sbjct: 383 NAFGMQFYRHGIAHPFRPLCSPWFIDHAVLLVGYGNR-------SNIPYWAIKNSWGSDW 435

Query: 338 GENGYYKICMGRNVCGVDSMVSSV 361
           GE GYY +  G   CGV++M SS 
Sbjct: 436 GEEGYYYLYRGSGACGVNTMASSA 459


>gi|71663165|ref|XP_818579.1| cruzipain precursor [Trypanosoma cruzi strain CL Brener]
 gi|70883838|gb|EAN96728.1| cruzipain precursor, putative [Trypanosoma cruzi]
          Length = 467

 Score =  223 bits (569), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 132/320 (41%), Positives = 165/320 (51%), Gaps = 34/320 (10%)

Query: 52  HFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRR 111
            F+ FK K  + Y +  E  +R  VF+ NL  A+     +P A  GVT FSDLT  EFR 
Sbjct: 37  QFAEFKQKHGRVYESAAEEAFRLSVFRENLFLARLHAAANPHATFGVTPFSDLTREEFRS 96

Query: 112 Q-------FLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSF 164
           +       F     R R+P   +          P   DWR  GAVT VKDQG CGSCW+F
Sbjct: 97  RYHNGAAHFAAAQERARVPVKVEVV------GAPAAVDWRARGAVTAVKDQGQCGSCWAF 150

Query: 165 SATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA- 223
           SA G +E   FL+   L +LSEQ LV CD           D GC+GGLMN+AFE+I++  
Sbjct: 151 SAIGNVECQWFLAGHPLTNLSEQMLVSCDKT---------DFGCSGGLMNNAFEWIVQEN 201

Query: 224 -GGVEREKDYPYTGTDGGS--CKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGI 280
            G V  E  YPY   +G S  C      + A ++    +  DE Q+AA L  +GP+AV +
Sbjct: 202 NGAVYTEDSYPYASGEGISPPCTTSGHTVGATITGHVELPQDEAQIAAWLAVNGPVAVAV 261

Query: 281 NAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGEN 340
           +A    TY GGV    +  + LDHGVL+VGY  S          PYWIIKNSW   WGE 
Sbjct: 262 DASSWMTYTGGVMTSCV-SEQLDHGVLLVGYNDSAAV-------PYWIIKNSWTTQWGEE 313

Query: 341 GYYKICMGRNVCGVDSMVSS 360
           GY +I  G N C V    SS
Sbjct: 314 GYIRIAKGSNQCLVKEEASS 333


>gi|332376957|gb|AEE63618.1| unknown [Dendroctonus ponderosae]
          Length = 318

 Score =  223 bits (569), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 127/315 (40%), Positives = 177/315 (56%), Gaps = 29/315 (9%)

Query: 46  LLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAV----HGVTKF 101
           L N    F  FK K SK+Y+ Q E   R  +F  NLR  +    L    +      V +F
Sbjct: 18  LENVGSTFQSFKLKHSKSYSNQVEEAKRLAIFTENLRDIEEHNALYAAGLVSYNKSVNQF 77

Query: 102 SDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTN-DLPTDFDWRDHGAVTGVKDQGACGS 160
           +DLT  EF+  +L L+ +  L       P + T   +PT  DWR  G VTGVKDQG CGS
Sbjct: 78  TDLTIDEFK-AYLTLHSKPTL----NTVPYVRTGLQVPTTLDWRSQGYVTGVKDQGDCGS 132

Query: 161 CWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYI 220
           CW+FS  G+ EGA++ STG+LVSLSEQQL+DC        + + + GC+GG +   F Y+
Sbjct: 133 CWAFSVVGSTEGAYYKSTGKLVSLSEQQLIDC--------TTNVNDGCDGGYLEETFPYV 184

Query: 221 LKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGI 280
            + G V  E  YPYTG D G+C+  +S +   VS + ++  + D + A +   GP++V +
Sbjct: 185 QQTGLVS-ESSYPYTGRD-GNCRISESDVVTKVSKYVLLGGEADLLEA-VGSVGPVSVAM 241

Query: 281 NAVWMQTYIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGE 339
           +A ++ +Y  GV    +C  Y L+HGVL+VGYG+          K YW+IKNSWG  WGE
Sbjct: 242 DATYIYSYASGVYESSLCSLYSLNHGVLVVGYGTQ-------DGKDYWLIKNSWGNTWGE 294

Query: 340 NGYYKICMGRNVCGV 354
            GY K+  G N CG+
Sbjct: 295 QGYLKLLRGTNECGI 309


>gi|343475823|emb|CCD12886.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 361

 Score =  223 bits (569), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 126/313 (40%), Positives = 169/313 (53%), Gaps = 22/313 (7%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEF 109
           +  F+ FK K+S++Y    E  +RFRVFK N+ RAK     +P A  GVT+FSD++P EF
Sbjct: 38  QQQFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSPEEF 97

Query: 110 RRQFL-GLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATG 168
           R  +  G           +K   + T   P   DWR  GAVT VKDQG C S W+FSA G
Sbjct: 98  RATYHNGAEYYAAALKRPRKVVNVSTGRPPMTVDWRKKGAVTPVKDQGKCDSSWAFSAIG 157

Query: 169 ALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYIL--KAGGV 226
            +EG   ++  EL SLSEQ LV CD         + D GC  GL + AF++IL    G V
Sbjct: 158 NIEGQWKIAGHELTSLSEQMLVSCD---------TNDLGCELGLKDPAFQWILWSNKGNV 208

Query: 227 EREKDYPYTGTDGG--SCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW 284
             E+ YPY    G   +C      + A +SN   +  DED +A  L + GP+A+ ++A  
Sbjct: 209 FTEQSYPYASGGGNVPTCDMSGKVVGAKISNMRYLPLDEDTIAEWLARKGPVAIAVDATS 268

Query: 285 MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYK 344
            Q Y GGV    I  + L++G L+VGY  +        + PYWIIKNSWG+ WGE GY +
Sbjct: 269 FQRYTGGVLTSCI-SRRLNYGALLVGYDDTS-------KPPYWIIKNSWGKGWGEEGYIR 320

Query: 345 ICMGRNVCGVDSM 357
           I  G N C V ++
Sbjct: 321 IEKGTNQCLVKNL 333


>gi|312282841|dbj|BAJ34286.1| unnamed protein product [Thellungiella halophila]
          Length = 358

 Score =  223 bits (569), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 145/374 (38%), Positives = 205/374 (54%), Gaps = 41/374 (10%)

Query: 3   RLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDG----EQSEDHLLNAEHH---FSL 55
           + IL S++L++L +  A+A    D+   IR V  SDG    E+S   +L    H   F+ 
Sbjct: 4   KTILPSVVLVILIAASAAADIGFDESNPIRMV--SDGLREIEESVVQILGQSRHVLSFAR 61

Query: 56  FKSKFSKTYATQEEHDYRFRVFKANL---RRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           F  ++ K Y   EE   RF +FK NL   R   +++L   +   GV +F+DLT  EF+R 
Sbjct: 62  FTHRYGKKYQNAEEIKLRFSIFKENLDLIRSTNKKRL---SYKLGVNQFADLTWQEFQRN 118

Query: 113 FLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEG 172
            LG  +     A  + +  L    LP   DWR+ G V+ VKDQG CGSCW+FS TGALE 
Sbjct: 119 KLGAAQNC--SATLKGSHKLTEAALPETKDWREDGIVSPVKDQGGCGSCWTFSTTGALEA 176

Query: 173 AHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDY 232
           A+  + G+ +SLSEQQLVDC    +       + GCNGGL + AFEYI   GG++ E+ Y
Sbjct: 177 AYHQAFGKGISLSEQQLVDCAGAFN-------NYGCNGGLPSQAFEYIKSNGGLDTEEAY 229

Query: 233 PYTGTDGGSCKFDKSKIAAAV---SNFSVISSDEDQMAANLVKHGPLAVGINAVW-MQTY 288
           PYTG D G+CK+    +   V    N ++ + DE + A  LV+  P+++    V   + Y
Sbjct: 230 PYTGKD-GTCKYSAENVGVQVLDSVNITLGAEDELKHAVGLVR--PVSIAFEVVKSFRLY 286

Query: 289 IGGVSCPYICGKY---LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKI 345
             GV     CG     ++H VL VGYG            PYW+IKNSWG +WG+ GY+K+
Sbjct: 287 KSGVYTDSHCGNTPMDVNHAVLAVGYGIEDGV-------PYWLIKNSWGADWGDKGYFKM 339

Query: 346 CMGRNVCGVDSMVS 359
            MG+N+CG+ +  S
Sbjct: 340 EMGKNMCGIATCAS 353


>gi|118350314|ref|XP_001008438.1| Papain family cysteine protease containing protein [Tetrahymena
           thermophila]
 gi|89290205|gb|EAR88193.1| Papain family cysteine protease containing protein [Tetrahymena
           thermophila SB210]
          Length = 389

 Score =  223 bits (569), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 127/345 (36%), Positives = 189/345 (54%), Gaps = 38/345 (11%)

Query: 45  HLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRR-AKRRQLLDPTAVHGVTKFSD 103
           +L   +  FS FK++  K Y   EE   RF +F+ NL   ++  Q+ + TA +G+T+FSD
Sbjct: 32  NLTQVKQLFSKFKAEHKKFYNFLEEQR-RFEIFRQNLDIISELNQVEEGTAEYGITQFSD 90

Query: 104 LTPSEFRRQFLGLNRRLRLPADAQKAPILP-TNDLPTDFDWRDHGAVTGVKDQGACGSCW 162
           +T  EF+ Q L  +   R    ++       + D PT +DWRDHGAVT VK+QG  G+CW
Sbjct: 91  MTTEEFKSQILIPSTYARNFTGSRYHGFQKISQDAPTSYDWRDHGAVTPVKNQGTVGTCW 150

Query: 163 SFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK 222
           +FS TG +EG  FL+   LVSLSE+Q+VDCD   +P  +G  D G  GG    AF+Y++ 
Sbjct: 151 TFSTTGNIEGQWFLAGNPLVSLSEEQIVDCDGSQEP-STGHADCGVFGGWPYLAFDYVIN 209

Query: 223 AGGVEREKDYPYTGTDGG--------------------------SCKFDKSKIAAAVSNF 256
           AGG+  E+ YPY   +GG                           C+  +  IAA + ++
Sbjct: 210 AGGLPSEETYPYCVGNGGCYPCPAPGYNETLCGPAVPYCNATAYPCRQGQVPIAAKIEDW 269

Query: 257 SVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGK-YLDHGVLIVGYGSSG 315
             +S DED +   L + GPL+V ++A ++Q Y  G+S P  C K  L+H VL+ GYG   
Sbjct: 270 KALSKDEDSIKQQLFEIGPLSVALDASYLQFYKKGISAPKFCSKTTLNHAVLLTGYGIDN 329

Query: 316 FAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSS 360
                     +W +KNSWG  WGE GY+++  G  +CG+++ V++
Sbjct: 330 GV-------EFWNVKNSWGAKWGEQGYFRLKRGVGMCGINTQVAT 367


>gi|343473370|emb|CCD14732.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 445

 Score =  223 bits (568), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 127/308 (41%), Positives = 169/308 (54%), Gaps = 22/308 (7%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEF 109
           +  F+ FK K+S++Y    E  +RFRVFK N+ RAK     +P A  GVT+FSD++P EF
Sbjct: 38  QQQFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSPEEF 97

Query: 110 RRQFL-GLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATG 168
           R  +  G           +K   + T   P   DWR  GAVT VKDQGACGSCW+FSA G
Sbjct: 98  RATYHNGAEYYAAALKRPRKVVNVSTGKAPEAVDWRKKGAVTPVKDQGACGSCWAFSAIG 157

Query: 169 ALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA--GGV 226
            +EG   ++  EL SLSEQ LV CD         + D GC GGLM+ + ++I+ +  G V
Sbjct: 158 NIEGQWKVAGHELTSLSEQMLVSCD---------TTDYGCRGGLMDKSLQWIVSSNKGNV 208

Query: 227 EREKDYPYTGTDGGSCKFDKSK--IAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW 284
              + YPY    G     +KS   + A +S    +  DE+ +A  L K+GP+A+ ++A  
Sbjct: 209 FTAQSYPYASGGGKMPPCNKSGKVVGAKISGHINLPKDENAIAEWLAKNGPVAIAVDATS 268

Query: 285 MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYK 344
              Y GGV    I  K LDH VL+VGY  +        + PYWIIKNSW + WGE GY +
Sbjct: 269 FLGYKGGVLTSCI-SKGLDHDVLLVGYNDT-------SKPPYWIIKNSWSKGWGEEGYIR 320

Query: 345 ICMGRNVC 352
           I  G N C
Sbjct: 321 IEKGTNQC 328


>gi|343477225|emb|CCD11889.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 447

 Score =  223 bits (567), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 127/308 (41%), Positives = 169/308 (54%), Gaps = 22/308 (7%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEF 109
           +  F+ FK K+S++Y    E  +RFRVFK N+ RAK     +P A  GVT+FSD++P EF
Sbjct: 38  QQQFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSPEEF 97

Query: 110 RRQFL-GLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATG 168
           R  +  G           +K   + T   P   DWR  GAVT VKDQGACGSCW+FSA G
Sbjct: 98  RATYHNGAEYYAAALKRPRKVVNVSTGKAPPAVDWRKKGAVTPVKDQGACGSCWAFSAIG 157

Query: 169 ALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA--GGV 226
            +EG   ++  EL SLSEQ LV CD         + D GC GGLM+ + ++I+ +  G V
Sbjct: 158 NIEGQWKVAGHELTSLSEQMLVSCD---------TTDYGCRGGLMDKSLQWIVSSNKGNV 208

Query: 227 EREKDYPYTGTDGGSCKFDKSK--IAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW 284
              + YPY    G     +KS   + A +S    +  DE+ +A  L K+GP+A+ ++A  
Sbjct: 209 FTAQSYPYASGGGKMPPCNKSGKVVGAKISGHINLPKDENAIAEWLAKNGPVAIAVDATS 268

Query: 285 MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYK 344
              Y GGV    I  K LDH VL+VGY  +        + PYWIIKNSW + WGE GY +
Sbjct: 269 FLGYKGGVLTSCI-SKGLDHDVLLVGYDDT-------SKPPYWIIKNSWSKGWGEEGYIR 320

Query: 345 ICMGRNVC 352
           I  G N C
Sbjct: 321 IEKGTNQC 328


>gi|148701126|gb|EDL33073.1| cathepsin F, isoform CRA_a [Mus musculus]
          Length = 417

 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 135/324 (41%), Positives = 191/324 (58%), Gaps = 24/324 (7%)

Query: 43  EDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKF 101
           +D  +     F  F + +++TY ++EE  +R  VF  N+ RA++ Q LD  TA +G+TKF
Sbjct: 110 QDFSVKMAPLFKDFMTTYNRTYESREEAQWRLTVFARNMIRAQKIQALDRGTAQYGITKF 169

Query: 102 SDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDL-PTDFDWRDHGAVTGVKDQGACGS 160
           SDLT  EF   +L  N  L+  +  + +P    NDL P ++DWR  GAVT VK+QG CGS
Sbjct: 170 SDLTEEEFHTIYL--NPLLQKESGRKMSPAKSINDLAPPEWDWRKKGAVTEVKNQGMCGS 227

Query: 161 CWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYI 220
           CW+FS TG +EG  FL+ G L+SLSEQ+L+DCD           D  C GGL ++A+  I
Sbjct: 228 CWAFSVTGNVEGQWFLNRGTLLSLSEQELLDCDK---------VDKACLGGLPSNAYAAI 278

Query: 221 LKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGI 280
              GG+E E DY Y G    +C F        +++   +S +E+++AA L + GP++V I
Sbjct: 279 KNLGGLETEDDYGYQG-HVQTCNFSAQMAKVYINDSVELSRNENKIAAWLAQKGPISVAI 337

Query: 281 NAVWMQTYIGGVSCPY--ICGK-YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENW 337
           NA  MQ Y  G++ P+  +C   ++DH VL+VGYG+           PYW IKNSWG +W
Sbjct: 338 NAFGMQFYRHGIAHPFRPLCSPWFIDHAVLLVGYGNR-------SNIPYWAIKNSWGSDW 390

Query: 338 GENGYYKICMGRNVCGVDSMVSSV 361
           GE GYY +  G   CGV++M SS 
Sbjct: 391 GEEGYYYLYRGSGACGVNTMASSA 414


>gi|154332645|ref|XP_001562139.1| cathepsin L-like protease [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134059587|emb|CAM37169.1| cathepsin L-like protease [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 441

 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 127/311 (40%), Positives = 170/311 (54%), Gaps = 30/311 (9%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           F  FK  + + YAT +E   R   F+ NL   +  Q  +P A  G+TKF DL+  EF  +
Sbjct: 38  FEEFKQTYQRVYATLDEEQQRLANFQRNLELMREHQANNPHARFGITKFFDLSEEEFATR 97

Query: 113 FLG----LNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATG 168
           +L       +  +  +   +      +  P   DWR+ GAVT VKDQG CGSCW+FSA G
Sbjct: 98  YLSGATHFAKAKKFASQYYRKVGADLSTAPAAVDWREKGAVTPVKDQGMCGSCWAFSAIG 157

Query: 169 ALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYIL--KAGGV 226
            +E   +L+T  L+SLSEQ+LV CD           D GCNGGLM  AF+++L  + G V
Sbjct: 158 NIESKWYLATHSLISLSEQELVSCD---------DVDEGCNGGLMLQAFDWLLNNRNGAV 208

Query: 227 EREKDYPYTGTDGGSCKFDKSK---IAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAV 283
                YPY   +G   +  +S    I A +     I S+ED MAA L  +GP+A+ ++A 
Sbjct: 209 YTGASYPYVSGNGSVPECSESSDLVIGAYIDGHVTIESNEDTMAAWLAANGPIAIAVDAS 268

Query: 284 WMQTYIGGV--SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENG 341
              +Y GGV  SC    GK L+HGVL+VGY  +G       E PYW+IKNSWGENWGE G
Sbjct: 269 AFMSYTGGVLTSCD---GKQLNHGVLLVGYNMTG-------EVPYWLIKNSWGENWGEKG 318

Query: 342 YYKICMGRNVC 352
           Y ++  G N C
Sbjct: 319 YVRVRKGTNEC 329


>gi|326501772|dbj|BAK02675.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 333

 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 131/320 (40%), Positives = 175/320 (54%), Gaps = 27/320 (8%)

Query: 51  HHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH----GVTKFSDLTP 106
            H+ L+K   +K Y+  EEH  R   ++ NL++ +   L     VH    G+ K++D+T 
Sbjct: 26  QHWKLWKEANNKRYSDAEEH-VRRATWEGNLQKVQEHNLQADLGVHTYWLGMNKYADMTV 84

Query: 107 SEFRRQFLGLNRRLR--LPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSF 164
           +EF +   G N  +R     D           LP   DWRD G VT VKDQG CGSCW+F
Sbjct: 85  TEFVKVMNGYNATMRGQRTQDRHTFSFNSKIALPDTVDWRDKGYVTDVKDQGQCGSCWAF 144

Query: 165 SATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAG 224
           S TGALEG HF  TG+LVSLSEQ LVDC  +         + GCNGGLM+ AFEYI +  
Sbjct: 145 STTGALEGQHFKQTGKLVSLSEQNLVDCSGK-------QGNMGCNGGLMDQAFEYIKENN 197

Query: 225 GVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISS-DEDQMAANLVKHGPLAVGINA- 282
           G++ E  YPY   D   C+F  + + A  + F+ I+S DE  +   +   GP++V I+A 
Sbjct: 198 GIDTEDSYPYEAVD-NQCRFKAANVGATDTGFTDITSKDESALQQAVATVGPISVAIDAG 256

Query: 283 -VWMQTYIGGV-SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGEN 340
               Q Y  GV + P+     LDHGVL VGYG+          K YW++KNSWGE WG+ 
Sbjct: 257 HTSFQLYKHGVYNEPFCSQTRLDHGVLAVGYGTD-------SGKDYWLVKNSWGEGWGDK 309

Query: 341 GYYKICMG-RNVCGVDSMVS 359
           GY K+    RN CG+ +  S
Sbjct: 310 GYIKMTRNKRNQCGIATAAS 329


>gi|1163075|emb|CAA81061.1| cysteine proteinase [Trypanosoma congolense]
          Length = 442

 Score =  222 bits (566), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 127/308 (41%), Positives = 169/308 (54%), Gaps = 22/308 (7%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEF 109
           +  F+ FK K+S++Y    E  +RFRVFK N+ RAK     +P A  GVT+FSD++P EF
Sbjct: 33  QQQFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSPEEF 92

Query: 110 RRQFL-GLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATG 168
           R  +  G           +K   + T   P   DWR  GAVT VKDQGACGSCW+FSA G
Sbjct: 93  RATYHNGAEYYAAALKRPRKVVNVSTGKAPPAVDWRKKGAVTPVKDQGACGSCWAFSAIG 152

Query: 169 ALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA--GGV 226
            +EG   ++  EL SLSEQ LV CD         + D GC GGLM+ + ++I+ +  G V
Sbjct: 153 NIEGQWKVAGHELTSLSEQMLVSCD---------TTDYGCRGGLMDKSLQWIVSSNKGNV 203

Query: 227 EREKDYPYTGTDGGSCKFDKSK--IAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW 284
              + YPY    G     +KS   + A +S    +  DE+ +A  L K+GP+A+ ++A  
Sbjct: 204 FTAQSYPYASGGGKMPPCNKSGKVVGAKISGHINLPKDENAIAEWLAKNGPVAIAVDATS 263

Query: 285 MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYK 344
              Y GGV    I  K LDH VL+VGY  +        + PYWIIKNSW + WGE GY +
Sbjct: 264 FLGYKGGVLTSCI-SKGLDHDVLLVGYDDT-------SKPPYWIIKNSWSKGWGEEGYIR 315

Query: 345 ICMGRNVC 352
           I  G N C
Sbjct: 316 IEKGTNQC 323


>gi|30141019|dbj|BAC75923.1| cysteine protease-1 [Helianthus annuus]
          Length = 461

 Score =  222 bits (566), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 134/358 (37%), Positives = 196/358 (54%), Gaps = 27/358 (7%)

Query: 1   MERLILSSLLLLLLSSVLASA-VAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSK 59
           M+ + +++L    L S++++  +++ + DA       S      D  +NA +   L K  
Sbjct: 1   MKLIPMATLSFFALISIISAMDMSIINYDATHMSSSSSSAPLRTDDEVNALYESWLVK-- 58

Query: 60  FSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGL--- 116
             KTY    E D RF++FK NLR        D T   G+ KF+DLT  E+R  + G+   
Sbjct: 59  HGKTYNALGEKDRRFQIFKDNLRFIDEHNSGDHTYKLGLNKFADLTNEEYRMTYTGIKTI 118

Query: 117 -NRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHF 175
            +++      + +      + LP   DWR+ GAVT VKDQG+CGSCW+FS TG++EG + 
Sbjct: 119 DDKKKLSKMKSDRYAYRSGDSLPEYVDWREQGAVTDVKDQGSCGSCWAFSTTGSVEGVNK 178

Query: 176 LSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYT 235
           + TG+L+S+SEQ+LV+CD         S + GCNGGLM+ AFE+I+K GG++ E+DYPYT
Sbjct: 179 IVTGDLISVSEQELVNCDT--------SYNQGCNGGLMDYAFEFIIKNGGIDTEEDYPYT 230

Query: 236 GTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVS 293
           G DG   K  K+     + ++  +  +++      V + P+AV I A     Q Y  G+ 
Sbjct: 231 GKDGKCDKNKKNAKVVTIDSYEDVPVNDESSLKKAVSNQPVAVAIEAGGRDFQFYTSGIF 290

Query: 294 CPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNV 351
               CG  LDHGVL  GYG+          K YW++KNSWG  WGE GY K  M RN+
Sbjct: 291 TG-SCGTALDHGVLAAGYGTE-------DGKDYWLVKNSWGAEWGEGGYLK--MERNI 338


>gi|391343119|ref|XP_003745860.1| PREDICTED: cathepsin L-like [Metaseiulus occidentalis]
          Length = 385

 Score =  222 bits (565), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 133/320 (41%), Positives = 178/320 (55%), Gaps = 22/320 (6%)

Query: 48  NAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH-GVTKFSDLTP 106
           N   H+  FK++ +K Y +  E   R  +F+ N +  +          + G+  F DLT 
Sbjct: 76  NLNQHWENFKAEHNKKYESFPEELMRRLIFEENHQFIEDHNSKKEFDFYLGMNHFGDLTN 135

Query: 107 SEFRRQFLGLNRRLRLPADAQK--APILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSF 164
            E+R ++LG  R    P+ A    +      D+P   DWRD G VT VK+QG CGSCW+F
Sbjct: 136 KEYRERYLGYRRPENTPSKASYIFSRAEKIEDVPDQIDWRDQGFVTPVKNQGQCGSCWAF 195

Query: 165 SATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAG 224
           SA G+LEG HF STG+LVSLSEQ LVDC     PE     +SGCNGG M+ AFEY+    
Sbjct: 196 SAVGSLEGQHFKSTGKLVSLSEQNLVDCS---TPE----GNSGCNGGWMDQAFEYVKDNH 248

Query: 225 GVEREKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVGINAV 283
           G++ E  YPY GTD GSC F    I A +  F  V   DE+ +   +   GP++V I+A 
Sbjct: 249 GIDTEDSYPYVGTD-GSCHFKNKSIGATLKGFMDVKEGDEEALRQAVGVAGPVSVAIDAS 307

Query: 284 WM--QTYIGGV-SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGEN 340
            M  Q Y GGV + P+     LDHGVL+VGYG       +F+ K +W++KNSWG  WG  
Sbjct: 308 SMLFQFYRGGVYNVPWCSTSELDHGVLVVGYGK------QFQGKDFWMVKNSWGVGWGIY 361

Query: 341 GYYKICMGR-NVCGVDSMVS 359
           GY ++   + N CG+ S  S
Sbjct: 362 GYIEMSRNKGNQCGIASKAS 381


>gi|351693703|gb|AEQ59229.1| cysteine protease precursor [Clonorchis sinensis]
          Length = 327

 Score =  222 bits (565), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 130/317 (41%), Positives = 187/317 (58%), Gaps = 23/317 (7%)

Query: 48  NAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTP 106
           NA   +  FK K+ K+Y+  ++ +YRFRVFK NL R K+ Q ++  TA +GVT+FSDLT 
Sbjct: 26  NARQLYEEFKLKYKKSYSNDDD-EYRFRVFKDNLLRIKQFQNMERGTAKYGVTQFSDLTA 84

Query: 107 SEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSA 166
            EF+ ++L  ++   +P D +  P +  +    +FDWR+HGAV  V D+G CGSCW+FSA
Sbjct: 85  QEFKVRYL-RSKFGGVPVDREPVPFIRMDVDDDNFDWRNHGAVGPVLDKGDCGSCWAFSA 143

Query: 167 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGV 226
            G +EG  F  T  L+ LSEQQL+DCD           D GCNGG    AF+ IL  GG+
Sbjct: 144 VGNIEGQWFRKTDNLLQLSEQQLLDCDE---------VDEGCNGGTPQQAFKQILGMGGL 194

Query: 227 EREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQ 286
           + + DYPY G + G C+   SK+   ++   ++  DE   A  L + GP +  +NA+ +Q
Sbjct: 195 QLDSDYPYEGRE-GQCRMVPSKVKVYINGSKILPEDEQIQAQMLKETGPFSSALNALSLQ 253

Query: 287 TYIGGV--SCPYIC-GKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYY 343
            Y  G+    P +C  + L+H VL VGYG  G         PYW +KNSW   +GENGY+
Sbjct: 254 FYTEGILHPLPALCDAQSLNHAVLTVGYGKEG-------RLPYWTVKNSWSTMFGENGYF 306

Query: 344 KICMGRNVCGVDSMVSS 360
           +I  G   CG++++VS+
Sbjct: 307 RIYRGDGPCGINTLVST 323


>gi|154332649|ref|XP_001562141.1| cathepsin L-like protease [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134059589|emb|CAM37171.1| cathepsin L-like protease [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 441

 Score =  222 bits (565), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 127/311 (40%), Positives = 170/311 (54%), Gaps = 30/311 (9%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           F  FK  + + YAT +E   R   F+ NL   +  Q  +P A  G+TKF DL+  EF  +
Sbjct: 38  FEEFKQTYQRVYATLDEEQQRLANFQRNLELMREHQANNPHARFGITKFFDLSEEEFATR 97

Query: 113 FLG----LNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATG 168
           +L       +  +  +   +      +  P   DWR+ GAVT VKDQG CGSCW+FSA G
Sbjct: 98  YLSGATHFAKAKKFASQHYRKVGADLSTAPAAVDWREKGAVTPVKDQGMCGSCWAFSAIG 157

Query: 169 ALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYIL--KAGGV 226
            +E   +L+T  L+SLSEQ+LV CD           D GCNGGLM  AF+++L  + G V
Sbjct: 158 NIESQWYLATHSLISLSEQELVSCD---------DVDEGCNGGLMLQAFDWLLNNRNGAV 208

Query: 227 EREKDYPYTGTDGGSCKFDKSK---IAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAV 283
                YPY   +G   +  +S    I A +     I S+ED MAA L  +GP+A+ ++A 
Sbjct: 209 YTGVSYPYVSGNGSVPECSESSDLVIGAYIDGHVTIESNEDTMAAWLAANGPIAIAVDAS 268

Query: 284 WMQTYIGGV--SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENG 341
              +Y GGV  SC    GK L+HGVL+VGY  +G       E PYW+IKNSWGENWGE G
Sbjct: 269 AFMSYTGGVLTSCD---GKQLNHGVLLVGYNMTG-------EVPYWLIKNSWGENWGEKG 318

Query: 342 YYKICMGRNVC 352
           Y ++  G N C
Sbjct: 319 YVRVRKGTNEC 329


>gi|355681647|gb|AER96812.1| cathepsin F [Mustela putorius furo]
          Length = 408

 Score =  222 bits (565), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 141/352 (40%), Positives = 197/352 (55%), Gaps = 40/352 (11%)

Query: 24  VNDDDAMIRQVVPSDGEQS--EDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANL 81
            +D +  +  V+P   ++   +D  +     F  F + +++TY ++EE  +R  VF  N+
Sbjct: 81  TDDKNETLSSVLPLLNKEPLPQDFSVKMASIFKEFVTTYNRTYESKEETQWRMSVFSNNM 140

Query: 82  RRAKRRQLLDP-TAVHGVTKFSDLTPSEFR--------RQFLGLNRRLRLPADAQKAPIL 132
            RA++ Q LD  TA +GVTKFSDLT  EFR        R++ G N RL    D       
Sbjct: 141 MRAQKIQALDRGTAQYGVTKFSDLTEEEFRTIYLNPLLREYRGKNMRL----DKSTG--- 193

Query: 133 PTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDC 192
             +  P+++DWR  GAVT VK+QG CGSCW+FS TG +EG  FL  G L+SLSEQ+L+DC
Sbjct: 194 --DSAPSEWDWRRKGAVTKVKNQGMCGSCWAFSVTGNVEGQWFLKQGALLSLSEQELLDC 251

Query: 193 DHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAA 252
           D           D  C GGL ++A+  I   GG+E E DY Y G    +C F   K    
Sbjct: 252 DK---------VDKACLGGLPSNAYSAIKTLGGLETEDDYSYRGR-MQTCGFSPKKARVY 301

Query: 253 VSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPY--ICGKYL-DHGVLIV 309
           +++   +S +E+ +AA L + GP++V INA  MQ Y  G+S P   +C  +L DH VL+V
Sbjct: 302 INDSVELSQNEETLAAWLAEKGPISVAINAFGMQFYRHGISHPLRPLCSPWLIDHAVLLV 361

Query: 310 GYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSV 361
           GYG+           P+W IKNSWG +WGE GYY +  G   CGV++M SS 
Sbjct: 362 GYGNRSGT-------PFWAIKNSWGSDWGEEGYYYLHRGSGACGVNTMASSA 406


>gi|391332597|ref|XP_003740719.1| PREDICTED: cathepsin L-like [Metaseiulus occidentalis]
          Length = 330

 Score =  222 bits (565), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 137/326 (42%), Positives = 189/326 (57%), Gaps = 38/326 (11%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLL----DPTAVHGVTKFSDLT 105
           + H+ LFK + +KTY  Q++   R  +F+AN+++     LL      +   G+  F+D+T
Sbjct: 23  DEHWELFKRQHNKTY-LQKQDVGRRAIFEANIKKINAHNLLYDLGRSSYRLGLNGFADMT 81

Query: 106 PSEFRRQFLGLNRRLRLPADAQKAPILPTND-----LPTDFDWRDHGAVTGVKDQGACGS 160
           P EF +      R  R  A+  +   L   D     +P   DWR  G VT VK+QG CGS
Sbjct: 82  PDEFEKY-----RGTRFEANEARVSKLQHRDNRSMHVPDTVDWRTEGYVTPVKNQGVCGS 136

Query: 161 CWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYI 220
           CW+FS TGALEG HF  +G+LVSLSEQ LVDC        +   ++GCNGGLM++AF +I
Sbjct: 137 CWAFSTTGALEGQHFRRSGDLVSLSEQMLVDC-------SAVYGNAGCNGGLMDNAFRFI 189

Query: 221 LKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQM--AANLVKHGPLA 277
             AGG+E EK YPYTG D G+C FD   I A ++ F  V S DE+ +  AA +V  GP++
Sbjct: 190 KDAGGLETEKSYPYTGKD-GTCHFDARGIGAKLTGFVDVPSRDEEALKEAAGVV--GPVS 246

Query: 278 VGINAVW--MQTYIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWG 334
           V I+A     Q Y  GV     C    LDHGVL+VGYG++         K YW++KNSWG
Sbjct: 247 VAIDASGQNFQFYKDGVYDEITCSSTSLDHGVLVVGYGTT------RDGKDYWLVKNSWG 300

Query: 335 ENWGENGYYKICMGR-NVCGVDSMVS 359
            +WG++GY ++   + N CG+ +M S
Sbjct: 301 SSWGQSGYIQMSRNKENQCGIATMAS 326


>gi|18402225|ref|NP_566633.1| Granulin repeat cysteine protease family protein [Arabidopsis
           thaliana]
 gi|11994461|dbj|BAB02463.1| cysteine proteinase [Arabidopsis thaliana]
 gi|17065298|gb|AAL32803.1| cysteine proteinase [Arabidopsis thaliana]
 gi|20260004|gb|AAM13349.1| cysteine proteinase [Arabidopsis thaliana]
 gi|332642713|gb|AEE76234.1| Granulin repeat cysteine protease family protein [Arabidopsis
           thaliana]
          Length = 452

 Score =  221 bits (564), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 139/370 (37%), Positives = 199/370 (53%), Gaps = 39/370 (10%)

Query: 1   MERLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKF 60
           M   I S  L LL+ SVL  ++++         V  ++  ++E     A   +  +  + 
Sbjct: 1   MATSIKSITLALLIFSVLLISLSLG-------SVTATETTRNEAE---ARRMYERWLVEN 50

Query: 61  SKTYATQEEHDYRFRVFKANLRRAKRRQLL-DPTAVHGVTKFSDLTPSEFRRQFLGLN-R 118
            K Y    E + RF +FK NL+  +    + + T   G+T+F+DLT  EFR  +L     
Sbjct: 51  RKNYNGLGEKERRFEIFKDNLKFVEEHSSIPNRTYEVGLTRFADLTNDEFRAIYLRSKME 110

Query: 119 RLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLST 178
           R R+P   +K      + LP   DWR  GAV  VKDQG+CGSCW+FSA GA+EG + + T
Sbjct: 111 RTRVPVKGEKYLYKVGDSLPDAIDWRAKGAVNPVKDQGSCGSCWAFSAIGAVEGINQIKT 170

Query: 179 GELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTD 238
           GEL+SLSEQ+LVDCD         S + GC GGLM+ AF++I++ GG++ E+DYPY  TD
Sbjct: 171 GELISLSEQELVDCDT--------SYNDGCGGGLMDYAFKFIIENGGIDTEEDYPYIATD 222

Query: 239 GGSCKFDKSKI-AAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSCP 295
              C  DK       +  +  +  ++++     + + P++V I A     Q Y  GV   
Sbjct: 223 VNVCNSDKKNTRVVTIDGYEDVPQNDEKSLKKALANQPISVAIEAGGRAFQLYTSGVFTG 282

Query: 296 YICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNV---- 351
             CG  LDHGV+ VGYGS G        + YWI++NSWG NWGE+GY+K  + RN+    
Sbjct: 283 -TCGTSLDHGVVAVGYGSEG-------GQDYWIVRNSWGSNWGESGYFK--LERNIKESS 332

Query: 352 --CGVDSMVS 359
             CGV  M S
Sbjct: 333 GKCGVAMMAS 342


>gi|301784869|ref|XP_002927853.1| PREDICTED: cathepsin F-like [Ailuropoda melanoleuca]
          Length = 394

 Score =  221 bits (564), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 141/350 (40%), Positives = 201/350 (57%), Gaps = 30/350 (8%)

Query: 23  AVNDDDAMIRQVVPSDGEQS--EDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKAN 80
             +D +  +  V+P   ++   +D  +     F  F + +++TY ++EE ++R  VF  N
Sbjct: 65  VTDDKNETLSSVLPLLNKEPLPQDFSVRMVSIFKEFVTTYNRTYESKEEAEWRMSVFSNN 124

Query: 81  LRRAKRRQLLDP-TAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPT--NDL 137
           + RA++ Q LD  TA +G+TKFSDLT  EFR  +L  N  LR     +K  +  +  +  
Sbjct: 125 VMRAQKIQALDRGTAQYGITKFSDLTEEEFRTIYL--NPLLR-ENRGKKMDLAKSIGDSA 181

Query: 138 PTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECD 197
           P ++DWR+ GAVT VKDQG CGSCW+FS TG +EG  FL  G L+SLSEQ+L+DCD    
Sbjct: 182 PPEWDWRNKGAVTQVKDQGMCGSCWAFSVTGNVEGQWFLKRGALLSLSEQELLDCDK--- 238

Query: 198 PEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFS 257
                  D  C GGL ++A+  I   GG+E E DY Y G    +C F   K    +++  
Sbjct: 239 ------VDKACLGGLPSNAYSAIKTLGGLETEDDYSYRG-HVQTCSFSSKKARVYINDSV 291

Query: 258 VISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPY--ICGKYL-DHGVLIVGYGS- 313
            +S +E ++ A L ++GP++V INA  MQ Y  G+S P   +C  +L DH VL+VGYG+ 
Sbjct: 292 ELSQNEQKLVAWLAQNGPISVAINAFGMQFYRRGISHPLRPLCSPWLIDHAVLLVGYGNR 351

Query: 314 SGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAA 363
           SG         P+W IKNSWG +WGE GYY +  G   CGV++M SS   
Sbjct: 352 SGI--------PFWAIKNSWGTDWGEEGYYYLHRGSGACGVNTMASSAVV 393


>gi|11464866|gb|AAG35358.1|AF314930_1 cruzipain [Trypanosoma cruzi]
          Length = 467

 Score =  221 bits (563), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 132/326 (40%), Positives = 167/326 (51%), Gaps = 34/326 (10%)

Query: 52  HFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRR 111
            F+ FK K  + Y +  E  +R  VF+ NL  A+     +P A  GVT FSDLT  EFR 
Sbjct: 37  QFAEFKQKHGRVYESAAEEAFRLSVFRENLFLARLHAAANPHATFGVTPFSDLTREEFRS 96

Query: 112 Q-------FLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSF 164
           +       F     R R+P   +          P   DWR  GAVT VKDQG CGSCW+F
Sbjct: 97  RYHNGAAHFAAAQERARVPVKVEVV------GAPAAVDWRARGAVTAVKDQGQCGSCWAF 150

Query: 165 SATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA- 223
           SA G +E   FL+   L +LSEQ LV CD           DSGC+GGLMN+AFE+I++  
Sbjct: 151 SAIGNVECQWFLAGHPLTNLSEQMLVSCDKT---------DSGCSGGLMNNAFEWIVQEN 201

Query: 224 -GGVEREKDYPYTGTDGGS--CKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGI 280
            G V  E  YPY   +G S  C      + A ++    +  DE Q+AA L  +GP+AV +
Sbjct: 202 NGAVYTEDSYPYASGEGISPPCTTSGHTVGATITGHVGLPQDEAQIAAWLAVNGPVAVAV 261

Query: 281 NAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGEN 340
           +A    TY GGV    +  + LDHGVL+VGY  S          PYWIIKNS    WGE 
Sbjct: 262 DASSWMTYTGGVMTSCV-SEQLDHGVLLVGYNDSAAV-------PYWIIKNSRTTQWGEE 313

Query: 341 GYYKICMGRNVCGVDSMVSSVAAIHT 366
           GY +I  G N C V    SS   + +
Sbjct: 314 GYIRIAKGSNQCLVKEEASSAVVLRS 339


>gi|13507095|gb|AAK28439.1| cysteine protease 3 precursor [Clonorchis sinensis]
          Length = 320

 Score =  221 bits (563), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 130/315 (41%), Positives = 186/315 (59%), Gaps = 26/315 (8%)

Query: 48  NAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTP 106
           NA   +  FK K+ K+Y+  ++ +YRFRVFK NL R K+ Q ++  TA +GVT+FSDLT 
Sbjct: 26  NARQLYEEFKLKYKKSYSN-DDDEYRFRVFKDNLLRIKQFQNMERGTAKYGVTQFSDLTA 84

Query: 107 SEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSA 166
            EF+ ++L  ++   +P D +  P +  +    +FDWR+HGAV  V DQG CGSCW+FSA
Sbjct: 85  QEFKVRYL-RSKFGGVPVDREPVPFIRMDVDDDNFDWRNHGAVGPVLDQGDCGSCWAFSA 143

Query: 167 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGV 226
            G +EG  F  T  L+ LSEQQL+DCD           D GCNGG    AF  IL  GG+
Sbjct: 144 VGNIEGQWFRKTDNLLQLSEQQLLDCD---------GVDEGCNGGTPQQAFRQILGMGGL 194

Query: 227 EREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQ 286
           + + DYPY G + G C+   SK+   ++   ++  DE   A  L + GPL+  +NA+++Q
Sbjct: 195 QLDSDYPYEGRE-GQCRMVPSKVKVYINGSKILPEDEQIQAQMLKETGPLSSALNALFLQ 253

Query: 287 TYIGGVSCPYIC-GKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKI 345
             +     P +C  + L+H VL VGYG  G         PYW +KNSW   +GENGY++I
Sbjct: 254 HPL-----PALCDAQSLNHAVLTVGYGKEG-------RLPYWTVKNSWSTMFGENGYFRI 301

Query: 346 CMGRNVCGVDSMVSS 360
             G   CG++++VS+
Sbjct: 302 YRGDGTCGINTLVST 316


>gi|354496134|ref|XP_003510182.1| PREDICTED: cathepsin F [Cricetulus griseus]
 gi|344250261|gb|EGW06365.1| Cathepsin F [Cricetulus griseus]
          Length = 462

 Score =  221 bits (562), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 135/323 (41%), Positives = 187/323 (57%), Gaps = 24/323 (7%)

Query: 43  EDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKF 101
           +D  +     F  F   +++TY ++EE  +R  VF  N+ +A++ + LD  TA +G+TKF
Sbjct: 155 QDFSVKMTTVFKDFMITYNRTYESREETQWRLTVFTRNMVKAQKIEALDRGTAQYGITKF 214

Query: 102 SDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTND-LPTDFDWRDHGAVTGVKDQGACGS 160
           SDLT  EF   +L  N  L+    ++ +     ND  P ++DWR  GAVT VKDQG CGS
Sbjct: 215 SDLTEEEFYTIYL--NPLLQKKPGSKMSLAKSINDPAPPEWDWRKKGAVTKVKDQGMCGS 272

Query: 161 CWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYI 220
           CW+FS TG +EG  FL+ G L+SLSEQ+L+DCD           D  C GG+ ++A+  I
Sbjct: 273 CWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDK---------MDKACLGGMPSNAYTAI 323

Query: 221 LKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGI 280
              GG+E E DY Y G    +C F   K    +++   +S +E +MAA L + GP++V I
Sbjct: 324 KSLGGLETEDDYSYKGY-VQACNFSAQKAKVYINDSVELSKNESKMAAWLAQKGPISVAI 382

Query: 281 NAVWMQTYIGGVSCPY--ICGKYL-DHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENW 337
           NA  MQ Y  G++ P   +C  +L DH VL+VGYG+           PYW IKNSWG NW
Sbjct: 383 NAFGMQFYRHGIAHPLRPLCSPWLIDHAVLLVGYGNRS-------NTPYWAIKNSWGSNW 435

Query: 338 GENGYYKICMGRNVCGVDSMVSS 360
           GE GYY +  G   CGV++M SS
Sbjct: 436 GEEGYYYLYRGSGACGVNTMASS 458


>gi|343474734|emb|CCD13687.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 524

 Score =  221 bits (562), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 123/319 (38%), Positives = 174/319 (54%), Gaps = 26/319 (8%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEF 109
           +  F+ FK K+S++Y    E  +RFR+FK ++ RAK     +P A  GVT+FSD++P EF
Sbjct: 117 QQQFAAFKQKYSRSYKDATEEAFRFRMFKQSMERAKEEAAANPYATFGVTQFSDMSPEEF 176

Query: 110 RRQFL-GLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATG 168
           R  +L G           +K   + T   P   DWR  GAVT VKDQG+CGSCW+F+A G
Sbjct: 177 RATYLNGAKYYAAALKRPRKVVNVSTGKAPPAVDWRKKGAVTPVKDQGSCGSCWAFAAIG 236

Query: 169 ALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA--GGV 226
            +EG   ++  EL SLSEQ LV CD         + +  C GG  + AF++I+ +  G V
Sbjct: 237 NIEGQWKIAGHELTSLSEQMLVSCD---------TTEDNCGGGFADRAFKWIVSSNKGNV 287

Query: 227 EREKDYPYTGTDG--GSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW 284
             E+ YPY   DG    C      + A +S    +  DE+ +A  L ++GP+A+ ++A  
Sbjct: 288 FTERSYPYASIDGYVPPCNKSGKVVGAKISGHINLPKDENAIAEWLARNGPVAIAVDAST 347

Query: 285 MQTYIGGV--SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGY 342
              Y GGV  SC     K+++H VL+VGY  +        + PYWIIKNSW + WGE GY
Sbjct: 348 FLDYKGGVLTSC---SSKHVNHEVLLVGYNDTS-------KPPYWIIKNSWDKEWGEEGY 397

Query: 343 YKICMGRNVCGVDSMVSSV 361
            +I  G N+C +     SV
Sbjct: 398 IRIEKGTNLCLMKEYARSV 416


>gi|151547430|gb|ABS12459.1| cysteine protease Cp [Citrus sinensis]
          Length = 361

 Score =  221 bits (562), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 144/369 (39%), Positives = 201/369 (54%), Gaps = 33/369 (8%)

Query: 5   ILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDG----EQSEDHLLNAEHH---FSLFK 57
           ++SS++LLL  +  ASA A + DD+   ++V SDG    E S   ++    H   F+ F 
Sbjct: 7   LVSSVILLLCCAAAASASASSFDDSNPIRLVSSDGLRDFETSVLQVIGQARHALSFARFA 66

Query: 58  SKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLN 117
            ++ K Y + EE   RF  F  NL   +       +   G+ KF+D +  EF+R  LG  
Sbjct: 67  RRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNKFADWSWEEFQRHRLGAA 126

Query: 118 RRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLS 177
           +     A  +    L  + LP   DWR+ G V+ VKDQG CGSCW+FS TG+LE A+  +
Sbjct: 127 QNC--SATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQA 184

Query: 178 TGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGT 237
            G+ +SLSEQQLVDC    +       + GCNGGL + AFEYI   GG++ E+ YPYTG 
Sbjct: 185 FGKGISLSEQQLVDCAQAFN-------NQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGK 237

Query: 238 DGGSCKFDKSKIAAAV---SNFSVISSDEDQMAANLVKHGPLAVGINAV-WMQTYIGGVS 293
           D G CKF    +   V    N ++ + DE Q A  LV+  P++V    V   + Y  GV 
Sbjct: 238 D-GVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVR--PVSVAFEVVDGFRFYKSGVY 294

Query: 294 CPYICGKY---LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRN 350
               CG     ++H V+ VGYG            PYW+IKNSWGENWG++GY+KI MG+N
Sbjct: 295 SSTKCGNTPMDVNHAVVAVGYGVE-------DGVPYWLIKNSWGENWGDHGYFKIKMGKN 347

Query: 351 VCGVDSMVS 359
           +CG+ +  S
Sbjct: 348 MCGIATCAS 356


>gi|146335576|gb|ABQ23397.1| cathepsin L [Trypanosoma carassii]
          Length = 456

 Score =  221 bits (562), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 127/314 (40%), Positives = 177/314 (56%), Gaps = 21/314 (6%)

Query: 52  HFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRR 111
            F+ FK++  K+Y +  E  YR RVF+ +++ A+     +P A  GVTKFSDLT  EF+ 
Sbjct: 35  QFAAFKAEHGKSYTSAAEEGYRMRVFEESMKAAQAHAAANPHAKFGVTKFSDLTHEEFKT 94

Query: 112 QFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALE 171
            +          A   + P+  T   P ++DWR  GAVT VKDQG CGSCW+FS TG +E
Sbjct: 95  LYANGAAHFAAAAKRARRPVSVTGTAPDEWDWRKKGAVTPVKDQGHCGSCWTFSTTGNIE 154

Query: 172 GAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA--GGVERE 229
           G   ++  EL +LSEQ LV CD           D GC+GGLM++AFE+I+    G V  E
Sbjct: 155 GQWAVAGNELTNLSEQMLVSCDAR---------DYGCSGGLMDNAFEWIVNQNDGFVFTE 205

Query: 230 KDYPYTGTDGGS--CKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQT 287
           + YPY    G +  C     K+ A +     + +DE++MAA L  +GP+++ ++A   + 
Sbjct: 206 ESYPYASGSGDAPLCDVGGRKVGATIKGHVGLPNDEEKMAAWLAANGPISIAVDADSFKA 265

Query: 288 YIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICM 347
           Y GGV      G+ LDHGVL+VGY        +    PYWIIKNSWG NWGE+GY ++  
Sbjct: 266 YKGGVLTGCEEGQ-LDHGVLLVGYN-------KVANPPYWIIKNSWGPNWGEHGYIRVGF 317

Query: 348 GRNVCGVDSMVSSV 361
           G N C ++S   S 
Sbjct: 318 GTNQCNLNSYACSA 331


>gi|343471318|emb|CCD16236.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 445

 Score =  220 bits (561), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 123/310 (39%), Positives = 171/310 (55%), Gaps = 26/310 (8%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEF 109
           +  F+ FK K+S++Y    E  +RFR+FK ++ RAK     +P A  GVT+FSD++P EF
Sbjct: 38  QQQFAAFKQKYSRSYKDATEEAFRFRMFKQSMERAKEEAAANPYATFGVTQFSDMSPEEF 97

Query: 110 RRQFL-GLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATG 168
           R  +L G           +K   + T   P   DWR  GAVT VKDQG+CGSCW+F+ATG
Sbjct: 98  RATYLNGAKYYAAALERPRKVVNVSTGKAPPAVDWRKKGAVTPVKDQGSCGSCWAFAATG 157

Query: 169 ALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA--GGV 226
            +EG   ++  EL SLSEQ LV CD         + +  C GG  + AF++I+ +  G V
Sbjct: 158 NIEGQWKIAGHELTSLSEQMLVSCD---------TTEDNCRGGFADRAFKWIVSSNKGNV 208

Query: 227 EREKDYPYTGTDG--GSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW 284
             E+ YPY  TDG    C      + A +S    +  DE+ +A  L ++GP+A+ ++A  
Sbjct: 209 FTEESYPYASTDGYVPPCNKSGKVVGAKISGHINLPKDENAIAEWLARNGPVAIAVDAST 268

Query: 285 MQTYIGGV--SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGY 342
              Y GGV  SC     + L H VL+VGY  +        + PYWIIKNSW + WGE GY
Sbjct: 269 FLDYKGGVLTSCS---SEGLSHDVLLVGYNDT-------SKPPYWIIKNSWDKEWGEEGY 318

Query: 343 YKICMGRNVC 352
            +I  G N+C
Sbjct: 319 IRIEKGTNLC 328


>gi|297793593|ref|XP_002864681.1| hypothetical protein ARALYDRAFT_496172 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297310516|gb|EFH40940.1| hypothetical protein ARALYDRAFT_496172 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 361

 Score =  220 bits (560), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 140/365 (38%), Positives = 198/365 (54%), Gaps = 35/365 (9%)

Query: 3   RLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDG----EQSEDHLLNAEHH---FSL 55
           + +LSS++L++L +  A+A    D+   IR V  SDG    E++   +L    H   F+ 
Sbjct: 4   KTVLSSVVLVILIAASAAADIGFDELNPIRMV--SDGLREVEETVSQILGQSRHVLTFAR 61

Query: 56  FKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLG 115
           F  ++ K Y   EE   RF +FK NL   +       +   GV +F+DLT  EF+R  LG
Sbjct: 62  FTHRYGKKYQNVEEMKLRFSIFKENLDLIRSTNKKGLSYKLGVNQFADLTWQEFQRTKLG 121

Query: 116 LNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHF 175
             +     A  + +  L    LP   DWR+ G V+ VKDQG CGSCW+FS TGALE A+ 
Sbjct: 122 AAQNC--SATLKGSHKLTEAALPETKDWREDGIVSPVKDQGGCGSCWTFSTTGALEAAYH 179

Query: 176 LSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYT 235
            + G+ +SLSEQQLVDC    +       + GCNGGL + AFEYI   GG++ E+ YPY 
Sbjct: 180 QAFGKGISLSEQQLVDCAGAYN-------NYGCNGGLPSQAFEYIKSNGGLDTEEAYPYI 232

Query: 236 GTDGGSCKFDKSKIAAAV---SNFSVISSDEDQMAANLVKHGPLAVGINAVW-MQTYIGG 291
           G D G+CKF    +   V    N ++ + DE + A  LV+  P+++    +   + Y  G
Sbjct: 233 GKD-GTCKFSAENVGVQVLDSVNITLGAEDELKHAVGLVR--PVSIAFEVIHSFRLYKSG 289

Query: 292 VSCPYICGKY---LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMG 348
           V     CG     ++H VL VGYG            PYW+IKNSWG +WG+ GY+K+ MG
Sbjct: 290 VYTDSHCGSTPMDVNHAVLAVGYGVEDGV-------PYWLIKNSWGADWGDKGYFKMEMG 342

Query: 349 RNVCG 353
           +N+CG
Sbjct: 343 KNMCG 347


>gi|66378053|gb|AAY45871.1| cathepsin L-like cysteine proteinase [Longidorus elongatus]
          Length = 358

 Score =  220 bits (560), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 142/376 (37%), Positives = 203/376 (53%), Gaps = 53/376 (14%)

Query: 10  LLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSL---FKSKFSKTYAT 66
           + LLL S+       ++  + I+       E   ++LL    ++ +   FK K +K+Y T
Sbjct: 4   ITLLLHSIFLLGFVNSEQISQIQ-------EHPRNNLLINHPYYPVWTNFKLKHAKSYKT 56

Query: 67  QEEHDYRFRVFKANLRRAKRRQLLDPTAVHG----VTKFSDLTPSEFRRQFLGLNRRLRL 122
           ++E   RF+VF +N +  ++  +      H     + KF+D+T +EFR++  G     +L
Sbjct: 57  KDEELLRFQVFASNHKVIEQHNIEYEAGQHSFALSLNKFADMTNAEFRQRMNGF----KL 112

Query: 123 PAD---AQKAPI--------LPTN-DLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGAL 170
           PA    A+  P+        +P N  +P   DWR  G VT VKDQG+CGSCW+FSATG+L
Sbjct: 113 PAKRKLAKSQPLKEDGMIFEMPDNVTIPDSVDWRKEGYVTKVKDQGSCGSCWAFSATGSL 172

Query: 171 EGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREK 230
           EG H+  TG+LVSLSEQ LVDCD   D       D GCNGG M+ AF+Y+    G++ E 
Sbjct: 173 EGQHYKQTGKLVSLSEQNLVDCDVNGD-------DEGCNGGYMDGAFQYVETNKGIDTEA 225

Query: 231 DYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVGINAV--WMQT 287
            YPY G D G C+F    + A  + F  +   +E  + A +   GP++V I+A     Q 
Sbjct: 226 SYPYKGRD-GRCRFKSEDVGATDTGFVDIPEGNETLLEAAIATVGPVSVAIDAASFKFQF 284

Query: 288 YIGGVSCPYICG-KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKIC 346
           Y  GV     C  +YLDHGVL VGY S+         K Y+I+KNSW E+WG++GY  I 
Sbjct: 285 YSHGVYYDRSCSPEYLDHGVLAVGYNSTK------DGKQYYIVKNSWSEDWGDDGY--IL 336

Query: 347 MGR---NVCGVDSMVS 359
           M R   N CG+ +M S
Sbjct: 337 MSRRKNNNCGIATMAS 352


>gi|449452572|ref|XP_004144033.1| PREDICTED: thiol protease aleurain-like [Cucumis sativus]
 gi|449500499|ref|XP_004161114.1| PREDICTED: thiol protease aleurain-like [Cucumis sativus]
          Length = 356

 Score =  220 bits (560), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 148/369 (40%), Positives = 194/369 (52%), Gaps = 33/369 (8%)

Query: 3   RLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSED--HLLNAEHH---FSLFK 57
           RL   S LLL+LS  +A +V   DD   IR V     E   +   +L    H   F+ F 
Sbjct: 4   RLFFVSSLLLVLSCAVAGSVF--DDSNPIRMVSDRLRELELEVVRVLGQVPHALRFARFA 61

Query: 58  SKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLN 117
            ++ K Y T EE   RF +F  +L   K       +   GV +F+D T  EFR+  LG  
Sbjct: 62  HRYGKKYETAEEMKLRFGIFLESLELIKSTNKQGLSYKLGVNQFADWTWEEFRKHRLGAA 121

Query: 118 RRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLS 177
           +     A  + +  L    LP   DWR  G V+ VKDQG CGSCW+FS TGALE A+  +
Sbjct: 122 QNC--SATTKGSHKLTDTALPESKDWRKDGIVSPVKDQGHCGSCWTFSTTGALEAAYAQA 179

Query: 178 TGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGT 237
            G+ +SLSEQQLVDC         G  + GCNGGL + AFEYI   GG++ E+ YPYTG 
Sbjct: 180 HGKGISLSEQQLVDCGR-------GFNNFGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGV 232

Query: 238 DGGSCKFDKSKIAAAV---SNFSVISSDEDQMAANLVKHGPLAVGINAV-WMQTYIGGVS 293
           D GSCKF    +   V    N ++ + DE + A   V+  P++V    V   + Y  GV 
Sbjct: 233 D-GSCKFVPENVGVQVIDSVNITLGAEDELKHAVAFVR--PVSVAFEVVSGFRLYSKGVY 289

Query: 294 CPYICGKY---LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRN 350
               CG     ++H VL VGYG            PYW+IKNSWG NWG+NGY+K+ MG+N
Sbjct: 290 TSNSCGSTPMDVNHAVLAVGYGVE-------DGIPYWLIKNSWGGNWGDNGYFKMEMGKN 342

Query: 351 VCGVDSMVS 359
           +CGV +  S
Sbjct: 343 MCGVATCAS 351


>gi|154332647|ref|XP_001562140.1| cathepsin L-like protease [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134059588|emb|CAM37170.1| cathepsin L-like protease [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 441

 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 126/311 (40%), Positives = 170/311 (54%), Gaps = 30/311 (9%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           F  FK  + + YAT +E   R   F+ NL   +  Q  +P A  G+TKF DL+  EF  +
Sbjct: 38  FEEFKQTYQRVYATLDEEQQRLANFQRNLELMREHQANNPHARFGITKFFDLSEEEFATR 97

Query: 113 FLG----LNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATG 168
           +L       +  +  +   +      +  P   DWR+ GAVT VKDQG CGSCW+FSA G
Sbjct: 98  YLSGATHFAKAKKFASQHYRKVGADLSTAPAAVDWREKGAVTPVKDQGMCGSCWAFSAIG 157

Query: 169 ALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYIL--KAGGV 226
            +E   +L+T  L+SLSEQ+LV CD           D GCNGGLM  AF+++L  + G V
Sbjct: 158 NIESQWYLATHSLISLSEQELVSCD---------DVDEGCNGGLMLQAFDWLLNNRNGAV 208

Query: 227 EREKDYPYTGTDGGSCKFDKSK---IAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAV 283
                YPY   +G   +  +S    I A +     I S+ED MAA L  +GP+A+ ++A 
Sbjct: 209 YTGVSYPYVSGNGSVPECSESSDLVIGAYIDGHVTIESNEDTMAAWLAANGPIAIAVDAS 268

Query: 284 WMQTYIGGV--SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENG 341
              +Y GGV  SC    GK L+HGVL+VGY  +G       E PYW+IKNSWG+NWGE G
Sbjct: 269 AFMSYTGGVLTSCD---GKQLNHGVLLVGYNMTG-------EVPYWLIKNSWGKNWGEKG 318

Query: 342 YYKICMGRNVC 352
           Y ++  G N C
Sbjct: 319 YVRVRKGTNEC 329


>gi|405971603|gb|EKC36430.1| Cathepsin L [Crassostrea gigas]
          Length = 360

 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 136/321 (42%), Positives = 181/321 (56%), Gaps = 28/321 (8%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLL----DPTAVHGVTKFSDLT 105
           E  +  FK    KTY   EE   RF +F+ N+++ +    L      +   GV +FSDL 
Sbjct: 53  EQAWKEFKILHDKTYDALEEESRRFEIFRENVQKIEEHNKLYHLGKKSYYLGVNQFSDLK 112

Query: 106 PSEFRRQFLGLNRRLRLPADAQKAPILPTNDL--PTDFDWRDHGAVTGVKDQGACGSCWS 163
             EF + + GL ++  L  D   +  L  N+L  P   DWR  G VT VK+QG CGSCWS
Sbjct: 113 HEEFVK-YNGL-KKTSLK-DGGCSSYLAANNLVEPDSVDWRKKGYVTDVKNQGQCGSCWS 169

Query: 164 FSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA 223
           FS TG+LEG HF  +G+LVSLSE QLVDC      E       GCNGGLM++AF+YI   
Sbjct: 170 FSTTGSLEGQHFRKSGKLVSLSESQLVDCSQSFGNE-------GCNGGLMDNAFKYIKSV 222

Query: 224 GGVEREKDYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVGINA 282
           GG+E E+DYPY     G+CKFD +K+AA  +    V S  E  +   + + GP++V I+A
Sbjct: 223 GGLESEEDYPYKPKQ-GTCKFDDTKVAATDTGCVDVESGSESALKKAVSEVGPVSVAIDA 281

Query: 283 VW--MQTYIGGV-SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGE 339
                Q+Y GGV   P    + LDHGVL VGYG+        + + YWI+KNSWG  WGE
Sbjct: 282 SHSSFQSYAGGVYDEPECSSEQLDHGVLCVGYGTDD------QGQDYWIVKNSWGAEWGE 335

Query: 340 NGYYKICMG-RNVCGVDSMVS 359
           +GY K+    +N CG+ +  S
Sbjct: 336 DGYVKMSRNKKNQCGIATQAS 356


>gi|18141289|gb|AAL60582.1|AF454960_1 senescence-associated cysteine protease [Brassica oleracea]
          Length = 359

 Score =  219 bits (559), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 140/371 (37%), Positives = 204/371 (54%), Gaps = 35/371 (9%)

Query: 3   RLIL-SSLLLLLLSSVLASAVAVNDDDAMIRQVVPS--DGEQSEDHLLNAEHH---FSLF 56
           R IL S++LL+L+++  A ++   D+   IR V     + E+S   +L    H   F+ F
Sbjct: 5   RTILPSAVLLILIAASTAESIGF-DESNPIRMVSDRLREVEESVVQILGQSRHVISFARF 63

Query: 57  KSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGL 116
             ++ K Y   EE   RF +FK NL   +       +   GV +F+D+T  EF+R  LG 
Sbjct: 64  AHRYGKRYENAEEMKLRFSIFKENLDLIRSTNKKGLSYKLGVNQFADMTWQEFQRTKLGA 123

Query: 117 NRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFL 176
            +     A  +    L    LP   DWR+ G V+ VKDQG CGSCW+FS TGALE A+  
Sbjct: 124 AQNC--SATLKGTHKLTGEALPETKDWREDGIVSPVKDQGGCGSCWTFSTTGALEAAYHQ 181

Query: 177 STGELVSLSEQQLVDCDHECDPEESGSCDS-GCNGGLMNSAFEYILKAGGVEREKDYPYT 235
           + G+ +SLSEQQLVDC        +G+ ++ GCNGGL + AFEYI   GG++ E+ YPYT
Sbjct: 182 AFGKGISLSEQQLVDC--------AGAFNNYGCNGGLPSQAFEYIKSNGGLDTEEAYPYT 233

Query: 236 GTDGGSCKFDKSKIAAAV---SNFSVISSDEDQMAANLVKHGPLAVGINAVW-MQTYIGG 291
           G D G+CK+    +   V    N ++ + DE + A  LV+  P+++    +   + Y  G
Sbjct: 234 GED-GTCKYSAENVGVEVLDSVNITLGAEDELKHAVGLVR--PVSIAFEVIHSFRLYKSG 290

Query: 292 VSCPYICGKY---LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMG 348
           V     CG+    ++H VL VGYG            PYW+IKNSWG +WG+ GY+K+ MG
Sbjct: 291 VYSDSHCGQTPMDVNHAVLAVGYGIEDGV-------PYWLIKNSWGADWGDKGYFKMEMG 343

Query: 349 RNVCGVDSMVS 359
           +N+CG+ +  S
Sbjct: 344 KNMCGIATCAS 354


>gi|297830592|ref|XP_002883178.1| hypothetical protein ARALYDRAFT_479457 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297329018|gb|EFH59437.1| hypothetical protein ARALYDRAFT_479457 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 452

 Score =  219 bits (559), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 143/371 (38%), Positives = 198/371 (53%), Gaps = 41/371 (11%)

Query: 1   MERLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKF 60
           M   I S  L LL+ S+L  ++++         V  +D  ++E     A   +  +  + 
Sbjct: 1   MATPIKSITLALLIFSMLLISLSLG-------SVTAADTTRNEAE---ARRMYEQWLVEN 50

Query: 61  SKTYATQEEHDYRFRVFKANLRRAKRRQLL-DPTAVHGVTKFSDLTPSEFRRQFL-GLNR 118
            K Y    E + RF +F  NL+  +    + + T   G+T+F+DLT  EFR  +L     
Sbjct: 51  RKNYNGLGEKETRFEIFTDNLKYIEEHNSVPNQTFEVGLTRFADLTNDEFRAIYLRSKME 110

Query: 119 RLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLST 178
           R R+P   ++      + LP   DWR  GAV  VKDQG CGSCW+FSA GA+EG + + T
Sbjct: 111 RTRVPVKGERYLYKVGDTLPDQIDWRAKGAVNPVKDQGNCGSCWAFSAIGAVEGINQIKT 170

Query: 179 GELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTD 238
           GEL+SLSEQ+LVDCD         S + GC GGLM+ AF++I++ GG++ E+DYPYT TD
Sbjct: 171 GELISLSEQELVDCDT--------SYNGGCGGGLMDYAFKFIIENGGIDTEEDYPYTATD 222

Query: 239 GGSCKFDK--SKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSC 294
              C  DK  S++        V  +DE  +   L    P++V I A     Q Y  GV  
Sbjct: 223 DNICNSDKKNSRVVTIDGYEDVPQNDEKSLKKALANQ-PISVAIEAGGRAFQLYKSGVFT 281

Query: 295 PYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNV--- 351
              CG  LDHGV+ VGYGS G        + YWI++NSWG NWGE+GY+K  + RN+   
Sbjct: 282 G-TCGTSLDHGVVAVGYGSEG-------GQDYWIVRNSWGSNWGESGYFK--LERNIKES 331

Query: 352 ---CGVDSMVS 359
              CGV  M S
Sbjct: 332 SGKCGVAMMAS 342


>gi|146215996|gb|ABQ10200.1| cysteine protease Cp2 [Actinidia deliciosa]
          Length = 376

 Score =  219 bits (559), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 117/306 (38%), Positives = 178/306 (58%), Gaps = 25/306 (8%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           ++ + +K  K Y    E + RF +FK NL+        + +   G+ +F+DLT  E+R  
Sbjct: 47  YAEWLAKHGKAYNGIGERERRFEIFKDNLKFVDEHNSENRSYKVGLNRFADLTNEEYRSM 106

Query: 113 FLGLN-----RRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSAT 167
           FLG       R ++  + +++  +  ++ LP   DWR+ GAV  +KDQG+CGSCW+FS  
Sbjct: 107 FLGTKTDSKRRFMKSKSASRRYAVQDSDMLPESVDWRESGAVAPIKDQGSCGSCWAFSTV 166

Query: 168 GALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVE 227
            A+EG + ++TGE++ LSEQ+LVDCD         + D+GCNGGLM+ AFE+I+  GG++
Sbjct: 167 AAVEGVNQIATGEMIQLSEQELVDCDR--------TYDAGCNGGLMDYAFEFIINNGGID 218

Query: 228 REKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--M 285
            E+DYPY G DG      K+    +++++  +   ++      V H P++V I A     
Sbjct: 219 TEEDYPYRGVDGTCDPERKNTKVVSINDYEDVPPYDEMALKKAVAHQPVSVAIEASGRAF 278

Query: 286 QTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKI 345
           Q Y+ GV     CG+ LDHGV++VGYG+   A        +WI++NSWG +WGENGY  I
Sbjct: 279 QLYLSGVFTGE-CGRALDHGVVVVGYGTDNGA-------DHWIVRNSWGTSWGENGY--I 328

Query: 346 CMGRNV 351
            M RNV
Sbjct: 329 RMERNV 334


>gi|297852302|ref|XP_002894032.1| F2G19.31/F2G19.31 [Arabidopsis lyrata subsp. lyrata]
 gi|297339874|gb|EFH70291.1| F2G19.31/F2G19.31 [Arabidopsis lyrata subsp. lyrata]
          Length = 455

 Score =  219 bits (559), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 128/346 (36%), Positives = 194/346 (56%), Gaps = 22/346 (6%)

Query: 9   LLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQE 68
           ++L L    +ASAV ++      +  V + G +S+  +++    + L K   ++   +  
Sbjct: 2   VILFLAMVAVASAVDMSIISYDEKHGVSTTGGRSDAEVMSIYEAW-LVKHGKAQNQNSLV 60

Query: 69  EHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLR-LPADAQ 127
           E D RF +FK NLR        + +   G+T+F+DLT  E+R ++LG     +     +Q
Sbjct: 61  EKDRRFEIFKDNLRFIDDHNKKNLSYRLGLTRFADLTNDEYRSKYLGAKMEKKGERRTSQ 120

Query: 128 KAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQ 187
           +      ++LP   DWR  GAV  VKDQG+CGSCW+FS  GA+EG + + TG+L++LSEQ
Sbjct: 121 RYEARVGDELPESIDWRKKGAVAEVKDQGSCGSCWAFSTIGAVEGINQIVTGDLITLSEQ 180

Query: 188 QLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKS 247
           +LVDCD         S + GCNGGLM+ AFE+I+K GG++ +KDYPY G DG   +  K+
Sbjct: 181 ELVDCDT--------SYNEGCNGGLMDYAFEFIIKNGGIDTDKDYPYKGVDGTCDQIRKN 232

Query: 248 KIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSCPYICGKYLDHG 305
                + ++  + +  ++     V H P++V I A     Q Y  G+     CG  LDHG
Sbjct: 233 AKVVTIDSYEDVPTYSEESLKKAVAHQPVSVAIEAGGRAFQLYDSGIF-DGTCGTQLDHG 291

Query: 306 VLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNV 351
           V+ VGYG+          K YWI++NSWG++WGE+GY K  M RN+
Sbjct: 292 VVAVGYGTE-------NGKDYWIVRNSWGKSWGESGYLK--MARNI 328


>gi|2804262|dbj|BAA24442.1| cysteine proteinase [Sitophilus zeamais]
          Length = 338

 Score =  219 bits (559), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 147/366 (40%), Positives = 196/366 (53%), Gaps = 50/366 (13%)

Query: 10  LLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEE 69
           L L+L++V+ S  AV+  D +  Q                   +S FK + SK Y ++ E
Sbjct: 3   LFLILAAVVISCQAVSFYDLVQEQ-------------------WSSFKMQHSKNYDSETE 43

Query: 70  HDYRFRVFKANLRR-AKRRQLLDPTAVH---GVTKFSDLTPSEFRRQFLGLNR---RLRL 122
             +R ++F  N  + AK  +L     V    G+ K++D+   EF     G N+    +  
Sbjct: 44  ERFRMKIFMENAHKVAKHNKLFSQGFVKFKLGLNKYADMLHHEFVSTLNGFNKTKNNILK 103

Query: 123 PADAQKAP--ILPTN-DLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTG 179
            +D   A   I P N  LP   DWRD GAVT VKDQG CGSCWSFSATG+LEG HF  TG
Sbjct: 104 GSDLNDAVRFISPANVKLPDTVDWRDKGAVTEVKDQGHCGSCWSFSATGSLEGQHFRKTG 163

Query: 180 ELVSLSEQQLVDCDHECDPEESGSC-DSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTD 238
           +LVSLSEQ LVDC        SG   ++GCNGGLM++AF YI   GG++ EK YPY   D
Sbjct: 164 KLVSLSEQNLVDC--------SGRYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYPYLAED 215

Query: 239 GGSCKFDKSKIAAAVSNFSVI-SSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGV-SC 294
              C +      A    F  I  ++ED + A +   GP+++ I+A     Q Y  GV S 
Sbjct: 216 -EKCHYKAQNSGATDKGFVDIEEANEDDLKAAVATVGPVSIAIDASHETFQLYSDGVYSD 274

Query: 295 PYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCG 353
           P    + LDHGVL+VGYG+S         + YW++KNSWG +WG NGY K+   + N+CG
Sbjct: 275 PECSSQELDHGVLVVGYGTSD------DGQDYWLVKNSWGPSWGLNGYIKMARNQDNMCG 328

Query: 354 VDSMVS 359
           V S  S
Sbjct: 329 VASQAS 334


>gi|261328618|emb|CBH11596.1| cysteine peptidase precursor, (fragment) [Trypanosoma brucei
           gambiense DAL972]
          Length = 404

 Score =  219 bits (558), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 127/314 (40%), Positives = 174/314 (55%), Gaps = 38/314 (12%)

Query: 60  FSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ------- 112
           + K Y   +E  +RFR F+ N+ +AK +   +P A  GVT FSD+T  EFR +       
Sbjct: 2   YGKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVTPFSDMTREEFRARYRNGASY 61

Query: 113 FLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEG 172
           F    +RLR      K   + T   P   DWR+ GAVT +KDQG CGSCW+F + G +EG
Sbjct: 62  FAAAQKRLR------KTVNVTTGRAPAAVDWREKGAVTPMKDQGQCGSCWAFYSIGNIEG 115

Query: 173 AHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA--GGVEREK 230
              ++   LVSLSEQ LV CD         + D GC GGLM++AF +I+ +  G V  E 
Sbjct: 116 QWQVAGNPLVSLSEQMLVSCD---------TIDFGCGGGLMDNAFNWIVNSNGGNVFTEA 166

Query: 231 DYPYTGTDG--GSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTY 288
            YPY   +G    C+ +  +I AA+++   +  DED +AA L ++GPLA+ ++A     Y
Sbjct: 167 SYPYVSGNGEQPQCQMNGHEIGAAITDHVDLPQDEDAIAAYLAENGPLAIAVDATSFMDY 226

Query: 289 IGGV--SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKIC 346
            GG+  SC     + LDHGVL+VGY  +          PYWIIKNSW   WGE+GY +I 
Sbjct: 227 NGGILTSC---TSEQLDHGVLLVGYNDN-------SNPPYWIIKNSWSNMWGEDGYIRIE 276

Query: 347 MGRNVCGVDSMVSS 360
            G N C ++  VSS
Sbjct: 277 KGTNQCLMNQAVSS 290


>gi|401416322|ref|XP_003872656.1| putative cathepsin L-like protease [Leishmania mexicana
           MHOM/GT/2001/U1103]
 gi|322488880|emb|CBZ24130.1| putative cathepsin L-like protease [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 366

 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 127/309 (41%), Positives = 169/309 (54%), Gaps = 26/309 (8%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           F  FK  + + Y T  E   R   F+ NL   +  Q  +P A  G+TKF DL+ +EF  +
Sbjct: 38  FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFAAR 97

Query: 113 FLG----LNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATG 168
           +L          R  A   +      + +P   DWR+ GAVT VKDQGACGSCW+FSA G
Sbjct: 98  YLNGAAYFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAFSAVG 157

Query: 169 ALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK--AGGV 226
            +EG  +L+  ELVSLSEQQLV CD   D         GC+GGLM  AF+++L+   G +
Sbjct: 158 NIEGQWYLAGHELVSLSEQQLVSCDDMND---------GCSGGLMLQAFDWLLQNTNGHL 208

Query: 227 EREKDYPYTGTDGGSCKFDKSK---IAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAV 283
             E  YPY   +G   +   S    + A +    +I S E  MAA L K+GP+A+ ++A 
Sbjct: 209 YTEDSYPYVSGNGYVPECSNSSELVVGAQIDGHVLIGSSEKAMAAWLAKNGPIAIALDAS 268

Query: 284 WMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYY 343
              +Y  GV    I GK L+HGVL+VGY  +G       E PYW+IKNSWG +WGE GY 
Sbjct: 269 SFMSYKSGVLTACI-GKQLNHGVLLVGYDMTG-------EVPYWVIKNSWGGDWGEQGYV 320

Query: 344 KICMGRNVC 352
           ++ MG N C
Sbjct: 321 RVVMGVNAC 329


>gi|9542|emb|CAA78443.1| cysteine proteinase [Leishmania mexicana]
          Length = 443

 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 133/331 (40%), Positives = 179/331 (54%), Gaps = 31/331 (9%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           F  FK  + + Y T  E   R   F+ NL   +  Q  +P A  G+TKF DL+ +EF  +
Sbjct: 38  FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFAAR 97

Query: 113 FLG----LNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATG 168
           +L          R  A   +      + +P   DWR+ GAVT VKDQGACGSCW+FSA G
Sbjct: 98  YLNGAAYFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAFSAVG 157

Query: 169 ALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK--AGGV 226
            +EG  +L+  ELVSLSEQQLV CD           D+GC+GGLM  AF+++L+   G +
Sbjct: 158 NIEGQWYLAGHELVSLSEQQLVSCD---------DMDNGCSGGLMLQAFDWLLQNTNGHL 208

Query: 227 EREKDYPYTGTDGGSCKFDKSK---IAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAV 283
             E  YPY   +G   +   S    + A +    +I S E  MAA L K+GP+A+ ++A 
Sbjct: 209 HTEDSYPYVSGNGYVPECSNSSELVVGAQIDGHVLIGSSEKAMAAWLAKNGPIAIALDAS 268

Query: 284 WMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYY 343
              +Y  GV    I GK L+HGVL+VGY  +G       E PYW+IKNSWG +WGE GY 
Sbjct: 269 SFMSYKSGVLTACI-GKQLNHGVLLVGYDMTG-------EVPYWVIKNSWGGDWGEQGYV 320

Query: 344 KICMGRNVC-----GVDSMVSSVAAIHTTSS 369
           ++ MG N C      V + V   AA  T++S
Sbjct: 321 RVVMGVNACLLSEYPVSAHVRESAAPGTSTS 351


>gi|225438807|ref|XP_002283263.1| PREDICTED: germination-specific cysteine protease 1-like isoform 1
           [Vitis vinifera]
          Length = 374

 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 124/319 (38%), Positives = 179/319 (56%), Gaps = 28/319 (8%)

Query: 41  QSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTK 100
           +SE+ ++     +  + +K  K Y    E + RF +FK NL+        + T   G+ +
Sbjct: 37  RSEEEVMGM---YQWWMAKHGKAYNGLGEKEKRFEIFKDNLKFIDEHNAQNRTYKVGLNR 93

Query: 101 FSDLTPSEFRRQFLGL----NRRL-RLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQ 155
           F+DLT  E+R  +LG      RR  +L   + +  ++P   LP   DWR+ GAV  VKDQ
Sbjct: 94  FADLTNEEYRAIYLGTRSDPKRRFAKLKNASPRYAVMPGEVLPESVDWRETGAVNPVKDQ 153

Query: 156 GACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNS 215
            +CGSCW+FS   A+EG + + TGEL+SLSEQ+LVDCD E         D GCNGGLM+ 
Sbjct: 154 RSCGSCWAFSTVAAVEGINQIVTGELISLSEQELVDCDTE--------YDMGCNGGLMDY 205

Query: 216 AFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGP 275
           AF++I+K GG++ EKDYPYTG DG      KS    ++  +  +   +++     V H P
Sbjct: 206 AFDFIIKNGGLDTEKDYPYTGFDGECNLSGKSSKVVSIDGYEDVPPFDEKALQKAVAHQP 265

Query: 276 LAVGINA--VWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSW 333
           ++V + A    +Q Y+ G+     CG  LDHG++ VGYG+            YWI++NSW
Sbjct: 266 VSVAVEAGGRALQLYVSGIFTGE-CGTALDHGIVAVGYGTE-------NGTDYWIVRNSW 317

Query: 334 GENWGENGYYKICMGRNVC 352
           G +WGENGY  I M RN+ 
Sbjct: 318 GSSWGENGY--IRMERNMA 334


>gi|148927394|gb|ABR19828.1| cysteine proteinase [Elaeis guineensis]
          Length = 469

 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 121/324 (37%), Positives = 184/324 (56%), Gaps = 32/324 (9%)

Query: 39  GEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH-- 96
           GE+S+D +      +  +K++ +++Y   +E + R  +F+ NLR   +         +  
Sbjct: 36  GERSDDEV---HRLYQAWKAQHARSYNALDEDEQRLEIFRDNLRFIDQHNAAANAGKYSF 92

Query: 97  --GVTKFSDLTPSEFRRQFLGLN-----RRLRLPADAQKAPILPTNDLPTDFDWRDHGAV 149
             G+T+F+DLT  E+R  +LG+      RR      + +     ++DLP   DWRD GAV
Sbjct: 93  RLGLTRFADLTNEEYRSTYLGVRTAGSRRRRNSTVGSNRYRFRSSDDLPDSIDWRDKGAV 152

Query: 150 TGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCN 209
             VKDQG+CGSCW+FS   A+EG + + TG+L+SLSEQ+LVDCD           + GCN
Sbjct: 153 VDVKDQGSCGSCWAFSTIAAVEGINHIVTGDLISLSEQELVDCDT--------YYNQGCN 204

Query: 210 GGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAAN 269
           GGLM+ AFE+I+  GG++ ++DYPYTG DG   ++ K+     + ++  +  ++++    
Sbjct: 205 GGLMDYAFEFIISNGGIDTDEDYPYTGRDGSCDQYRKNAHVVTIDSYEDVPINDEKSLQK 264

Query: 270 LVKHGPLAVGINA--VWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYW 327
            V + P++V I A     Q Y  G+   Y CG  LDHGV  +GYGS          K YW
Sbjct: 265 AVANQPVSVAIEAGGRAFQLYESGIFTGY-CGTELDHGVTAIGYGSE-------NGKYYW 316

Query: 328 IIKNSWGENWGENGYYKICMGRNV 351
           I+KNSWG +WGE+GY +  M RN+
Sbjct: 317 IVKNSWGSDWGESGYIR--MERNI 338


>gi|401430387|ref|XP_003886572.1| unnamed protein product, partial [Leishmania mexicana
           MHOM/GT/2001/U1103]
 gi|356491640|emb|CBZ40951.1| unnamed protein product, partial [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 332

 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 127/309 (41%), Positives = 169/309 (54%), Gaps = 26/309 (8%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           F  FK  + + Y T  E   R   F+ NL   +  Q  +P A  G+TKF DL+ +EF  +
Sbjct: 38  FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFAAR 97

Query: 113 FLG----LNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATG 168
           +L          R  A   +      + +P   DWR+ GAVT VKDQGACGSCW+FSA G
Sbjct: 98  YLNGAAYFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAFSAVG 157

Query: 169 ALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK--AGGV 226
            +EG  +L+  ELVSLSEQQLV CD   D         GC+GGLM  AF+++L+   G +
Sbjct: 158 NIEGQWYLAGHELVSLSEQQLVSCDDMND---------GCSGGLMLQAFDWLLQNTNGHL 208

Query: 227 EREKDYPYTGTDGGSCKFDKSK---IAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAV 283
             E  YPY   +G   +   S    + A +    +I S E  MAA L K+GP+A+ ++A 
Sbjct: 209 HTEDSYPYVSGNGYVPECSNSSELVVGAQIDGHVLIGSSEKAMAAWLAKNGPIAIALDAS 268

Query: 284 WMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYY 343
              +Y  GV    I GK L+HGVL+VGY  +G       E PYW+IKNSWG +WGE GY 
Sbjct: 269 SFMSYKSGVLTACI-GKQLNHGVLLVGYDMTG-------EVPYWVIKNSWGGDWGEQGYV 320

Query: 344 KICMGRNVC 352
           ++ MG N C
Sbjct: 321 RVVMGVNAC 329


>gi|62320725|dbj|BAD95392.1| cysteine proteinase RD21A [Arabidopsis thaliana]
          Length = 433

 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 129/350 (36%), Positives = 195/350 (55%), Gaps = 32/350 (9%)

Query: 10  LLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEE 69
           +L L    ++SAV ++      +  V + G +SE  +++    + L K   +++  +  E
Sbjct: 10  ILFLAMVAVSSAVDMSIISYDEKHGVSTTGGRSEAEVMSIYEAW-LVKHGKAQSQNSLVE 68

Query: 70  HDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLN------RRLRLP 123
            D RF +FK NLR        + +   G+T+F+DLT  E+R ++LG        RR  L 
Sbjct: 69  KDRRFEIFKDNLRFVDEHNEKNLSYRLGLTRFADLTNDEYRSKYLGAKMEKKGERRTSLR 128

Query: 124 ADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVS 183
            +A+       ++LP   DWR  GAV  VKDQG CGSCW+FS  GA+EG + + TG+L++
Sbjct: 129 YEARVG-----DELPESIDWRKKGAVAEVKDQGGCGSCWAFSTIGAVEGINQIVTGDLIT 183

Query: 184 LSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCK 243
           LSEQ+LVDCD         S + GCNGGLM+ AFE+I+K GG++ +KDYPY G DG   +
Sbjct: 184 LSEQELVDCDT--------SYNEGCNGGLMDYAFEFIIKNGGIDTDKDYPYKGVDGTCDQ 235

Query: 244 FDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSCPYICGKY 301
             K+     + ++  + +  ++     V H P+++ I A     Q Y  G+     CG  
Sbjct: 236 IRKNAKVVTIDSYEDVPTYSEESLKKAVAHQPISIAIEAGGRAFQLYDSGIF-DGSCGTQ 294

Query: 302 LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNV 351
           LDHGV+ VGYG+          K YWI++NSWG++WGE+GY +  M RN+
Sbjct: 295 LDHGVVAVGYGTE-------NGKDYWIVRNSWGKSWGESGYLR--MARNI 335


>gi|146215994|gb|ABQ10199.1| cysteine protease Cp1 [Actinidia deliciosa]
          Length = 358

 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 141/373 (37%), Positives = 199/373 (53%), Gaps = 34/373 (9%)

Query: 1   MERLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLL----NAEH--HFS 54
           M R   S L++L+     AS+ +  DD+  IR VV     + E  +L    ++ H   F+
Sbjct: 1   MARTSFSLLIILIACVAGASSASTFDDENPIRTVVSDALREFETSILSVLGDSRHALSFA 60

Query: 55  LFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFL 114
            F  ++ K Y T EE   RF +F  NL+  +       +   GV  F+D T  EFRR  L
Sbjct: 61  RFAHRYGKRYETAEETKLRFAIFSENLKLIRSHNKKGLSYTLGVNHFADWTWEEFRRHRL 120

Query: 115 GLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAH 174
           G  +     A  +    L    LP   DWR  G V+ VKDQG CGSCW+FS TGALE A+
Sbjct: 121 GAAQNC--SATTKGNHKLTEEALPEMKDWRVSGIVSPVKDQGHCGSCWTFSTTGALEAAY 178

Query: 175 FLSTGELVSLSEQQLVDCDHECDPEESGSCDS-GCNGGLMNSAFEYILKAGGVEREKDYP 233
             + G+ +SLSEQQLVDC        +G+ ++ GC+GGL + AFEY+   GG++ E+ YP
Sbjct: 179 KQAFGKGISLSEQQLVDC--------AGAFNNFGCSGGLPSQAFEYVKYNGGLDTEEAYP 230

Query: 234 YTGTDGGSCKFDKSKIAAAV---SNFSVISSDEDQMAANLVKHGPLAVGINAV-WMQTYI 289
           YTG + G CKF    +   V    N ++ + DE + A   V+  P++V    V   + Y 
Sbjct: 231 YTGKN-GECKFSSENVGVQVLDSVNITLGAEDELKHAVAFVR--PVSVAFQVVNGFRLYK 287

Query: 290 GGVSCPYICGKY---LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKIC 346
            GV     CG+    ++H VL VGYG            PYW+IKNSWG +WG++GY+K+ 
Sbjct: 288 EGVYTSDTCGRTPMDVNHAVLAVGYGVENGV-------PYWLIKNSWGADWGDSGYFKME 340

Query: 347 MGRNVCGVDSMVS 359
           MG+N+CGV +  S
Sbjct: 341 MGKNMCGVATCAS 353


>gi|2511689|emb|CAB17074.1| cysteine proteinase precursor [Phaseolus vulgaris]
          Length = 364

 Score =  219 bits (557), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 128/358 (35%), Positives = 189/358 (52%), Gaps = 42/358 (11%)

Query: 1   MERLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKF 60
           M  +++ +LLLL  +   A+A+++ +               SE+ +++    + +   K 
Sbjct: 1   MPSMLIPTLLLLSFTFSHATAMSIIN--------------YSENEVMDMYEEWLV---KH 43

Query: 61  SKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLN--- 117
            K Y   +E + RF+VFK NL   +     + T   G+ KF+D+T  E+R  +LG     
Sbjct: 44  RKVYNGLDEKEKRFQVFKDNLGFIQDHNAQNNTYTLGLNKFADITNEEYRAMYLGTRTDA 103

Query: 118 --RRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHF 175
             R ++      +      + LP   DWR  GAV  +KDQG CGSCW+FS   A+EG + 
Sbjct: 104 KRRVMKTQNTGHRYAYNSGDQLPVHVDWRLKGAVGPIKDQGNCGSCWAFSTVAAVEGINN 163

Query: 176 LSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYT 235
           + TGE VSLSEQ+LVDCD E         D GCNGGLM+ AF++I++ GG++ E+DYPY 
Sbjct: 164 IVTGEFVSLSEQELVDCDRE--------YDEGCNGGLMDYAFQFIIQNGGIDTEEDYPYQ 215

Query: 236 GTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVS 293
           G DG   +  K      +  +  + S+ +      V H P++V I A    +Q Y  GV 
Sbjct: 216 GIDGTCDQTKKKTKVVQIDGYEDVPSNNENALKKAVSHQPVSVAIEASGRALQLYQSGVF 275

Query: 294 CPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNV 351
               CG  LDHGV++VGYG+            YW+++NSWG  WGE+GY+K  M RNV
Sbjct: 276 TGK-CGTALDHGVVVVGYGTENGV-------DYWLVRNSWGTGWGEDGYFK--MERNV 323


>gi|14517542|gb|AAK62661.1| F2G19.31/F2G19.31 [Arabidopsis thaliana]
 gi|19548039|gb|AAL87383.1| F2G19.31/F2G19.31 [Arabidopsis thaliana]
          Length = 462

 Score =  219 bits (557), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 129/350 (36%), Positives = 195/350 (55%), Gaps = 32/350 (9%)

Query: 10  LLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEE 69
           +L L    ++SAV ++      +  V + G +SE  +++    + L K   +++  +  E
Sbjct: 10  ILFLAMVTVSSAVDMSIISYDEKHGVSTTGGRSEAEVMSIYEAW-LVKHGKAQSQNSLVE 68

Query: 70  HDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLN------RRLRLP 123
            D RF +FK NLR        + +   G+T+F+DLT  E+R ++LG        RR  L 
Sbjct: 69  KDRRFEIFKDNLRFVDEHNEKNLSYRLGLTRFADLTNDEYRSKYLGAKMEKKGERRTSLR 128

Query: 124 ADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVS 183
            +A+       ++LP   DWR  GAV  VKDQG CGSCW+FS  GA+EG + + TG+L++
Sbjct: 129 YEARVG-----DELPESIDWRKKGAVAEVKDQGGCGSCWAFSTIGAVEGINQIVTGDLIT 183

Query: 184 LSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCK 243
           LSEQ+LVDCD         S + GCNGGLM+ AFE+I+K GG++ +KDYPY G DG   +
Sbjct: 184 LSEQELVDCDT--------SYNEGCNGGLMDYAFEFIIKNGGIDTDKDYPYKGVDGTCDQ 235

Query: 244 FDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSCPYICGKY 301
             K+     + ++  + +  ++     V H P+++ I A     Q Y  G+     CG  
Sbjct: 236 IRKNAKVVTIDSYEDVPTYSEESLKKAVAHQPISIAIEAGGRAFQLYDSGIF-DGSCGTQ 294

Query: 302 LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNV 351
           LDHGV+ VGYG+          K YWI++NSWG++WGE+GY +  M RN+
Sbjct: 295 LDHGVVAVGYGTE-------NGKDYWIVRNSWGKSWGESGYLR--MARNI 335


>gi|195628596|gb|ACG36128.1| vignain precursor [Zea mays]
          Length = 362

 Score =  219 bits (557), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 130/369 (35%), Positives = 196/369 (53%), Gaps = 30/369 (8%)

Query: 2   ERLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSD--GEQSEDHLLNAEHHFSLFKSK 59
           + + +++L+LLL    +A  +      A+  +V PS   G  +          +  + ++
Sbjct: 9   KHITMTTLMLLLCVIAIADCIC---QAAVAARVEPSTTVGRTTGGDEAMMMARYKKWMAQ 65

Query: 60  FSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTA-VHGVTKFSDLTPSEFRRQFLGLNR 118
           + + Y    E  +RF+VFKAN     R         V G  +F+DLT  EF   + GL +
Sbjct: 66  YRRKYKDDAEKAHRFQVFKANAEFIDRSNAGGKKKYVLGTNQFADLTSKEFAAMYTGLRK 125

Query: 119 RLRLPADAQKAPI------LPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEG 172
              +P+ A++ P           D     DWR  GAVT VK+QG CG CW+FSA GA+EG
Sbjct: 126 PAAVPSGAKQIPAGFKYQNFTRLDDDVQVDWRQQGAVTPVKNQGQCGCCWAFSAVGAMEG 185

Query: 173 AHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDY 232
              ++TG LVSLSEQQ++DCD     E  G  + GCNGG M++AF+Y++  GGV  E  Y
Sbjct: 186 LIMITTGNLVSLSEQQILDCD-----ESDG--NQGCNGGYMDNAFQYVVNNGGVTTEDAY 238

Query: 233 PYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGIN--AVWMQTYIG 290
           PY+    G+C+    + AA +S F  + S ++   AN V + P++VG++  +   Q Y G
Sbjct: 239 PYSAVQ-GTCQ--NVQPAATISGFQDLPSGDENALANAVANQPVSVGVDGGSSPFQFYQG 295

Query: 291 GVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRN 350
           G+     CG  ++H V  +GYG+        +   YWI+KNSWG  WGENG+ ++ MG  
Sbjct: 296 GIYDGDGCGTDMNHAVTAIGYGADD------QGTQYWILKNSWGTGWGENGFMQLQMGVG 349

Query: 351 VCGVDSMVS 359
            CG+ +M S
Sbjct: 350 ACGISTMAS 358


>gi|18401614|ref|NP_564497.1| cysteine proteinase RD21a [Arabidopsis thaliana]
 gi|1172873|sp|P43297.1|RD21A_ARATH RecName: Full=Cysteine proteinase RD21a; Short=RD21; Flags:
           Precursor
 gi|12321010|gb|AAG50628.1|AC083835_13 cysteine protease, putative [Arabidopsis thaliana]
 gi|435619|dbj|BAA02374.1| thiol protease [Arabidopsis thaliana]
 gi|18175926|gb|AAL59952.1| putative cysteine proteinase RD21A [Arabidopsis thaliana]
 gi|22136972|gb|AAM91715.1| putative cysteine proteinase RD21A [Arabidopsis thaliana]
 gi|332194014|gb|AEE32135.1| cysteine proteinase RD21a [Arabidopsis thaliana]
          Length = 462

 Score =  219 bits (557), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 129/350 (36%), Positives = 195/350 (55%), Gaps = 32/350 (9%)

Query: 10  LLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEE 69
           +L L    ++SAV ++      +  V + G +SE  +++    + L K   +++  +  E
Sbjct: 10  ILFLAMVAVSSAVDMSIISYDEKHGVSTTGGRSEAEVMSIYEAW-LVKHGKAQSQNSLVE 68

Query: 70  HDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLN------RRLRLP 123
            D RF +FK NLR        + +   G+T+F+DLT  E+R ++LG        RR  L 
Sbjct: 69  KDRRFEIFKDNLRFVDEHNEKNLSYRLGLTRFADLTNDEYRSKYLGAKMEKKGERRTSLR 128

Query: 124 ADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVS 183
            +A+       ++LP   DWR  GAV  VKDQG CGSCW+FS  GA+EG + + TG+L++
Sbjct: 129 YEARVG-----DELPESIDWRKKGAVAEVKDQGGCGSCWAFSTIGAVEGINQIVTGDLIT 183

Query: 184 LSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCK 243
           LSEQ+LVDCD         S + GCNGGLM+ AFE+I+K GG++ +KDYPY G DG   +
Sbjct: 184 LSEQELVDCDT--------SYNEGCNGGLMDYAFEFIIKNGGIDTDKDYPYKGVDGTCDQ 235

Query: 244 FDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSCPYICGKY 301
             K+     + ++  + +  ++     V H P+++ I A     Q Y  G+     CG  
Sbjct: 236 IRKNAKVVTIDSYEDVPTYSEESLKKAVAHQPISIAIEAGGRAFQLYDSGIF-DGSCGTQ 294

Query: 302 LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNV 351
           LDHGV+ VGYG+          K YWI++NSWG++WGE+GY +  M RN+
Sbjct: 295 LDHGVVAVGYGTE-------NGKDYWIVRNSWGKSWGESGYLR--MARNI 335


>gi|398010921|ref|XP_003858657.1| cathepsin L-like protease, partial [Leishmania donovani]
 gi|322496866|emb|CBZ31937.1| cathepsin L-like protease, partial [Leishmania donovani]
          Length = 345

 Score =  219 bits (557), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 131/313 (41%), Positives = 175/313 (55%), Gaps = 34/313 (10%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           F  FK  + + Y T  E   R   F+ NL   +  Q  +P A  G+TKF DL+ +EF  +
Sbjct: 38  FEEFKRTYRRAYGTLAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 113 FLGLNRRLRLPADAQKA------PILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSA 166
           +L  N      A  Q A           + +P   DWR+ GAVT VK+QGACGSCW+FSA
Sbjct: 98  YL--NGAAYFAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSCWAFSA 155

Query: 167 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK--AG 224
            G +E     +   LVSLSEQQLV CD +         D+GCNGGLM  AFE++L+   G
Sbjct: 156 VGNIESQWARAGHGLVSLSEQQLVSCDDK---------DNGCNGGLMLQAFEWLLRHMYG 206

Query: 225 GVEREKDYPYTGTDGGSCK-FDKSKI--AAAVSNFSVISSDEDQMAANLVKHGPLAVGIN 281
            V  EK YPYT  +G   +  + SK+   A +  + +I S+E  MAA L ++GP+A+ ++
Sbjct: 207 IVFTEKSYPYTSGNGDVAECLNSSKLVPGAQIDGYVMIPSNETVMAAWLAENGPIAIAVD 266

Query: 282 AVWMQTYIGGV--SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGE 339
           A    +Y  GV  SC    G  L+HGVL+VGY  +G         PYW+IKNSWGE+WGE
Sbjct: 267 ASSFMSYQSGVLTSC---AGDALNHGVLLVGYNKTGGV-------PYWVIKNSWGEDWGE 316

Query: 340 NGYYKICMGRNVC 352
            GY ++ MGRN C
Sbjct: 317 KGYVRVAMGRNAC 329


>gi|1256830|gb|AAB68374.1| cysteine endopeptidase 1 [Phaseolus vulgaris]
 gi|2959418|emb|CAA12118.1| cysteine protease [Phaseolus vulgaris]
          Length = 364

 Score =  219 bits (557), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 128/358 (35%), Positives = 189/358 (52%), Gaps = 42/358 (11%)

Query: 1   MERLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKF 60
           M  +++ +LLLL  +   A+A+++ +               SE+ +++    + +   K 
Sbjct: 1   MPSMLIPTLLLLSFTFSHATAMSIIN--------------YSENEVMDMYEEWLV---KH 43

Query: 61  SKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLN--- 117
            K Y   +E + RF+VFK NL   +     + T   G+ KF+D+T  E+R  +LG     
Sbjct: 44  RKVYNGLDEKEKRFQVFKDNLGFIQDHNAQNNTYTLGLNKFADITNKEYRAMYLGTRTDA 103

Query: 118 --RRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHF 175
             R ++      +      + LP   DWR  GAV  +KDQG CGSCW+FS   A+EG + 
Sbjct: 104 KRRVMKTQNTGHRYAYNSGDQLPVHVDWRLKGAVGPIKDQGNCGSCWAFSTVAAVEGINN 163

Query: 176 LSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYT 235
           + TGE VSLSEQ+LVDCD E         D GCNGGLM+ AF++I++ GG++ E+DYPY 
Sbjct: 164 IVTGEFVSLSEQELVDCDRE--------YDEGCNGGLMDYAFQFIIQNGGIDTEEDYPYQ 215

Query: 236 GTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVS 293
           G DG   +  K      +  +  + S+ +      V H P++V I A    +Q Y  GV 
Sbjct: 216 GIDGTCDETKKKTKVVQIDGYEDVPSNNENALKKAVSHQPVSVAIEASGRALQLYQSGVF 275

Query: 294 CPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNV 351
               CG  LDHGV++VGYG+            YW+++NSWG  WGE+GY+K  M RNV
Sbjct: 276 TGK-CGTALDHGVVVVGYGTENGV-------DYWLVRNSWGTGWGEDGYFK--MERNV 323


>gi|154336052|ref|XP_001564262.1| cysteine peptidase A (CPA) [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134061296|emb|CAM38321.1| cysteine peptidase A (CPA) [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 479

 Score =  218 bits (556), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 129/311 (41%), Positives = 175/311 (56%), Gaps = 25/311 (8%)

Query: 49  AEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVT-KFSDLTPS 107
           A  HF  FK +  K++  +    +RF  FK N++ A      +P A + V+ KF+ LTP 
Sbjct: 38  ASAHFMHFKKQHGKSFGEEAVEGHRFNAFKENMQTAVYLNAQNPHAHYDVSGKFAALTPQ 97

Query: 108 EFRRQFLGLNRRLR-LPADAQKAPILP-TNDLPTDFDWRDHGAVTGVKDQGACGSCWSFS 165
           EF +Q+L  +   R L A  ++A +        +  DWR+ GAVT VKDQG CGSCW+FS
Sbjct: 98  EFAKQYLNPDYYTRQLKAHKERAHVYEGVRGGLSAVDWREKGAVTEVKDQGLCGSCWAFS 157

Query: 166 ATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK--A 223
           A G +EG   LS   LVSLSEQ LV CD         + D GCNGGLM+ A+ +I+K  +
Sbjct: 158 AIGNIEGQWALSGNTLVSLSEQMLVSCD---------TVDMGCNGGLMDQAWAWIIKNHS 208

Query: 224 GGVEREKDYPYTGTDGGSCK-FDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA 282
           G V  E  YPYT  DG +       K+ A +S    +  DED + A L K+GP+++ ++A
Sbjct: 209 GAVYTEVSYPYTSGDGSTASCLSTGKVGARISGQVSLPQDEDAIEAWLEKNGPISIAVDA 268

Query: 283 VWMQTYIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENG 341
              Q Y GGV     C  Y L+HGVL+VGY +S          PYWI+KNSWG +WGE+G
Sbjct: 269 TTWQLYFGGVVSN--CFAYNLNHGVLLVGYNNSA-------NPPYWIVKNSWGTSWGEHG 319

Query: 342 YYKICMGRNVC 352
           Y ++  G N C
Sbjct: 320 YIRLAKGSNQC 330


>gi|15593249|gb|AAL02221.1|AF410881_1 cysteine protease CP10 precursor [Frankliniella occidentalis]
          Length = 334

 Score =  218 bits (556), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 133/334 (39%), Positives = 177/334 (52%), Gaps = 30/334 (8%)

Query: 35  VPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKAN-LRRAKRRQLLDPT 93
           +PSD        +  + H+  FK+  +KTYA   E  YR +VFK N +R AK   L    
Sbjct: 18  IPSD--------MEIQAHWESFKATHAKTYANTVEEAYRAKVFKENAIRIAKHNDLFASG 69

Query: 94  AVH---GVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVT 150
            V    G ++++D+   E   +  G    L+  +         +       DWR  GAVT
Sbjct: 70  EVTFKVGYSQYADMHTHEVTEKLNGYRSGLKQASAFVHTASNDSWPWSKKVDWRSKGAVT 129

Query: 151 GVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNG 210
            +KDQG CGSCWSFSATG+LEG  FL    LVSLSEQ LVDC  +   E       GCNG
Sbjct: 130 PIKDQGQCGSCWSFSATGSLEGQLFLKNKNLVSLSEQNLVDCSWDFGNE-------GCNG 182

Query: 211 GLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFS-VISSDEDQMAAN 269
           GLM+SAFEY+   GG++ E+ YPYT  DG SC +  +  A   + +  V +  E  +   
Sbjct: 183 GLMDSAFEYVESNGGIDTEESYPYTAVDGDSCLYKAANNAGVNTGYKDVQAKSESALRDA 242

Query: 270 LVKHGPLAVGINAV-W-MQTYIGGVSCPYICGK-YLDHGVLIVGYGSSGFAPIRFKEKPY 326
           + K GP++V I+A  W  Q Y  G+     C   YLDHGVL VGYGS       +  K +
Sbjct: 243 VEKAGPVSVAIDASNWSFQMYSSGIYYESACSSDYLDHGVLAVGYGS------EWPNKEF 296

Query: 327 WIIKNSWGENWGENGYYKICMG-RNVCGVDSMVS 359
           WI+KNSWG +WGE GY K+    +N CG+ +  S
Sbjct: 297 WIVKNSWGTSWGEEGYIKMARNKKNNCGIATEAS 330


>gi|330805273|ref|XP_003290609.1| hypothetical protein DICPUDRAFT_92519 [Dictyostelium purpureum]
 gi|325079248|gb|EGC32857.1| hypothetical protein DICPUDRAFT_92519 [Dictyostelium purpureum]
          Length = 333

 Score =  218 bits (556), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 136/310 (43%), Positives = 177/310 (57%), Gaps = 29/310 (9%)

Query: 59  KFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGL-- 116
           K  + Y+ +E  D R++ FK N+    +    +   V G+TKF+DLT  E+++ +LG+  
Sbjct: 39  KHDRAYSHEEFTD-RYQAFKENMDFIHKWNSQESDTVLGLTKFADLTNEEYKKHYLGIKV 97

Query: 117 NRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFL 176
           N +  L A AQK         P   DWR+ GAV+ VKDQG CGSCWSFS TGA+EGAH +
Sbjct: 98  NVKKNLNA-AQKGLKFFKFTGPDSIDWREKGAVSQVKDQGQCGSCWSFSTTGAVEGAHQI 156

Query: 177 STGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTG 236
            +G +VSLSEQ LVDC  +         + GC GGLM +AFEYI+  GG+  E  YPYT 
Sbjct: 157 KSGNMVSLSEQNLVDCSGQYG-------NQGCEGGLMVNAFEYIIDNGGIATESSYPYTA 209

Query: 237 TDGGSCKFDKSKIAAAVSNFSVI-SSDEDQMAANLVKHGPLAVGINAVWM--QTYIGGV- 292
              G CKF KS   A +  +  I   +ED + A L K  P++V I+A  M  Q Y  GV 
Sbjct: 210 AQ-GRCKFTKSMNGANIIGYKEIPQGEEDSLTAALAKQ-PVSVAIDASHMSFQLYSSGVY 267

Query: 293 SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNV- 351
             P    + LDHGVL VGYG+        + K Y+IIKNSWG  WG++GY  I M RN  
Sbjct: 268 DEPACSSEALDHGVLAVGYGT-------LEGKDYYIIKNSWGPTWGQDGY--IFMSRNAQ 318

Query: 352 --CGVDSMVS 359
             CGV +M S
Sbjct: 319 NQCGVATMAS 328


>gi|224131910|ref|XP_002328138.1| predicted protein [Populus trichocarpa]
 gi|222837653|gb|EEE76018.1| predicted protein [Populus trichocarpa]
          Length = 349

 Score =  218 bits (556), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 139/372 (37%), Positives = 197/372 (52%), Gaps = 42/372 (11%)

Query: 1   MERLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKF 60
           M   +L +  L   +S+   +V  +D   +           S +HL + +    LF+S  
Sbjct: 1   MALSVLKTSFLTFFASLFVCSVLAHDFSIV---------GYSPEHLTSVDKLVELFESWI 51

Query: 61  S---KTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLN 117
           S   K Y + EE  +RF VFK NL+   +R     +   G+ +F+DL+  EF+ +FLGL 
Sbjct: 52  SGHGKAYNSLEEKLHRFEVFKENLKHIDQRNKEVTSYWLGLNEFADLSHEEFKSKFLGLY 111

Query: 118 RRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLS 177
                   ++        DLP   DWR  GAVT VK+QG+CGSCW+FS   A+EG + + 
Sbjct: 112 PEFPRKKSSEDFSYRDVVDLPKSIDWRKKGAVTPVKNQGSCGSCWAFSTVAAVEGINQIV 171

Query: 178 TGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGT 237
            G L SLSEQQL+DCD         S ++GCNGGLM+ AFE+I+  GG+ +E+DYPY   
Sbjct: 172 AGNLTSLSEQQLIDCD--------TSFNNGCNGGLMDYAFEFIVNNGGLHKEEDYPYL-M 222

Query: 238 DGGSCKFDKSKI-AAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGV-S 293
           + G+C   + ++    +S +  +  +++Q     + H PL+V I+A     Q Y GGV S
Sbjct: 223 EEGTCDEKREEMEVVTISGYHDVPRNDEQSLLKALAHQPLSVAIDASGRDFQFYSGGVFS 282

Query: 294 CPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRN--- 350
            P  CG  LDHGV  VGYGSS           Y I+KNSWG  WGE GY +  M RN   
Sbjct: 283 GP--CGTDLDHGVAAVGYGSSSGI-------DYIIVKNSWGPKWGERGYLR--MKRNTGK 331

Query: 351 ---VCGVDSMVS 359
              +CG++ M S
Sbjct: 332 PEGLCGINKMAS 343


>gi|401430288|ref|XP_003886537.1| unnamed protein product [Leishmania mexicana MHOM/GT/2001/U1103]
 gi|356491333|emb|CBZ40988.1| unnamed protein product [Leishmania mexicana MHOM/GT/2001/U1103]
          Length = 533

 Score =  218 bits (555), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 133/331 (40%), Positives = 178/331 (53%), Gaps = 31/331 (9%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           F  FK  + + Y T  E   R   F+ NL   +  Q  +P A  G+TKF DL+ +EF  +
Sbjct: 128 FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFAAR 187

Query: 113 FLG----LNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATG 168
           +L          R  A   +      + +P   DWR+ GAVT VKDQGACGSCW+FSA G
Sbjct: 188 YLNGAAYFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAFSAVG 247

Query: 169 ALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK--AGGV 226
            +EG  +L+  ELVSLSEQQLV CD   D         GC+GGLM  AF+++L+   G +
Sbjct: 248 NIEGQWYLAGHELVSLSEQQLVSCDDMND---------GCDGGLMLQAFDWLLQNTNGHL 298

Query: 227 EREKDYPYTGTDGGSCKFDKSK---IAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAV 283
             E  YPY   +G   +   S    + A +    +I S E  MAA L K+GP+A+ ++A 
Sbjct: 299 HTEDSYPYVSGNGYVPECSNSSELVVGAQIDGHVLIGSSEKAMAAWLAKNGPIAIALDAS 358

Query: 284 WMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYY 343
              +Y  GV    I GK L+HGVL+VGY  +G       E PYW+IKNSWG +WGE GY 
Sbjct: 359 SFMSYKSGVLTACI-GKQLNHGVLLVGYDMTG-------EVPYWVIKNSWGGDWGEQGYV 410

Query: 344 KICMGRNVC-----GVDSMVSSVAAIHTTSS 369
           ++ MG N C      V + V   AA  T++S
Sbjct: 411 RVVMGVNACLLSEYPVSAHVRESAAPGTSTS 441


>gi|374713649|gb|AEZ65082.1| cysteine protease [Carica papaya]
          Length = 471

 Score =  218 bits (555), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 135/370 (36%), Positives = 201/370 (54%), Gaps = 40/370 (10%)

Query: 5   ILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSD----GEQSEDHLLNAEHHFSLFKSKF 60
           I  S L ++ S  LAS   ++ D       +P+D     E++E H++    H+ +   K 
Sbjct: 10  IAISFLFMVFSLSLASMSIIDYD-------LPADPLQSTERTEAHMMKMYEHWLV---KH 59

Query: 61  SKTYATQEEHDYRFRVFKANLRRA-KRRQLLDPTAVHGVTKFSDLTPSEFRRQFLG--LN 117
            K Y    E + RF +FK NLR   ++  +   T   G+TKF+DLT  E+R  +LG  + 
Sbjct: 60  GKNYNAIGEKERRFEIFKDNLRFVDEQNSVPGRTYKLGLTKFADLTNEEYRAMYLGAKME 119

Query: 118 RRLRLPADAQKAPILPT---NDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAH 174
           ++ +L  +  +  +      +DLP+  DWR+ GAVT VKDQG CGSCW+FS  G++EG +
Sbjct: 120 KKEKLRTERSQRYLHKAGNDDDLPSHVDWREKGAVTEVKDQGQCGSCWAFSTVGSVEGIN 179

Query: 175 FLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPY 234
            + TG+L+SLSEQ+LVDCD         + + GCNGGLM+ AFE+I+K GG++ E DYPY
Sbjct: 180 QIVTGDLISLSEQELVDCDK--------AYNQGCNGGLMDYAFEFIIKNGGIDSEADYPY 231

Query: 235 TGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGV 292
             +D       K+     +  +  +  ++++     V + P++V I A     Q Y  GV
Sbjct: 232 RASDNMCDSNRKNAHVVTIDGYEDVPENDEESLKKAVANQPVSVAIEAGGREFQLYQSGV 291

Query: 293 SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVC 352
                CG  LDHGV+ VGYG+            YWI++NSWG  WGE+GY +  M RNV 
Sbjct: 292 FTGR-CGTNLDHGVVAVGYGTENGI-------DYWIVRNSWGPKWGESGYIR--MERNVA 341

Query: 353 GVDSMVSSVA 362
             D+    +A
Sbjct: 342 STDTGKCGIA 351


>gi|401397136|ref|XP_003879989.1| cathepsin L, related [Neospora caninum Liverpool]
 gi|325114397|emb|CBZ49954.1| cathepsin L, related [Neospora caninum Liverpool]
          Length = 415

 Score =  218 bits (555), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 135/358 (37%), Positives = 193/358 (53%), Gaps = 34/358 (9%)

Query: 4   LILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDG--------EQSEDHLLNAEHHFSL 55
           L+ +++ LL+ +S L       DDD  +    P +         E  E+H  NA   F  
Sbjct: 67  LVAAAVSLLVFASFLIQWQG--DDDRGVFPPSPVEDHKTPVNIWEWKEEHFQNA---FGS 121

Query: 56  FKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLG 115
           F++ + K+YAT+EE   R+ +FK NL           +    +  F DL+  EFRR++LG
Sbjct: 122 FRATYGKSYATEEETQKRYAIFKNNLAYIHTHNQQGYSYSLKMNHFGDLSREEFRRKYLG 181

Query: 116 LNRRLRLPAD----AQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALE 171
            N+   L ++    A +   +  +D+P+  DWR+ G VT VKDQ  CGSCW+FSATGALE
Sbjct: 182 YNKSRNLKSNNLGVATELLKVSPSDVPSAVDWREKGCVTPVKDQRDCGSCWAFSATGALE 241

Query: 172 GAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKD 231
           GAH   TGEL+SLSEQ+LVDC            + GC+GG MN AF+Y++ +GG+  E+ 
Sbjct: 242 GAHCAKTGELLSLSEQELVDCS-------LAEGNQGCSGGEMNDAFQYVVDSGGLCSEEG 294

Query: 232 YPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTYI 289
           YPY   D G CK    K+   +S F  +    +      + H P+++ I A  +  Q Y 
Sbjct: 295 YPYLARD-GECKRACKKV-VTISGFKDVPRKSETAMKAALAHSPVSIAIEADQLPFQFYH 352

Query: 290 GGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICM 347
            GV     CG  LDHGVL+VGYG+      +  +K +WI+KNSWG  WG +GY  + M
Sbjct: 353 EGV-FDASCGTDLDHGVLLVGYGTD-----KETKKDFWIMKNSWGSGWGRDGYMYMAM 404


>gi|72008176|ref|XP_780713.1| PREDICTED: cathepsin L-like [Strongylocentrotus purpuratus]
          Length = 335

 Score =  218 bits (555), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 131/322 (40%), Positives = 180/322 (55%), Gaps = 27/322 (8%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANL----RRAKRRQLLDPTAVHGVTKFSDLT 105
           +  ++ +K++  K Y + EE   R  +++ NL    +   +  L   T   G+ +F+DL 
Sbjct: 25  DEDWNQWKNEHGKRYLSDEEEASRKLIWEKNLDIVIKHNLKYDLGHFTYALGMNQFADLK 84

Query: 106 PSEFRRQFLGLNRRLRLPADAQKAPILPTN---DLPTDFDWRDHGAVTGVKDQGACGSCW 162
             EF     G  R       A+ +  LP+N   +LP   DWR  G VT VKDQG CGSCW
Sbjct: 85  NEEFVAMMTGF-RVNGTSKAAKGSTFLPSNNIGELPKTVDWRTKGYVTPVKDQGQCGSCW 143

Query: 163 SFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK 222
           +FS TG+LEG HF +TG+LVSLSEQ LVDC  +   E       GC+GGLM+ AF+YI+K
Sbjct: 144 AFSTTGSLEGQHFKATGKLVSLSEQNLVDCSGKEGNE-------GCDGGLMDQAFQYIIK 196

Query: 223 AGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKH-GPLAVGIN 281
           AGG++ E+ YPY   D G C F K+ I A V+ ++ ++SD +      V H GP++V I+
Sbjct: 197 AGGIDTEESYPYKAVD-GECHFKKANIGATVTGYTDVTSDSETALQKAVAHIGPISVAID 255

Query: 282 AVWM--QTYIGGV-SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWG 338
           A  M  Q Y  GV + P      LDHGVL VGYG++           YWI+KNSW E WG
Sbjct: 256 ASHMSFQLYKSGVYNEPDCSSTLLDHGVLAVGYGTTSDGT------DYWIVKNSWAETWG 309

Query: 339 ENGYYKICMGR-NVCGVDSMVS 359
            NGY  +   + N CG+ +  S
Sbjct: 310 MNGYLWMSRNKDNQCGIATQAS 331


>gi|195124431|ref|XP_002006696.1| GI21205 [Drosophila mojavensis]
 gi|193911764|gb|EDW10631.1| GI21205 [Drosophila mojavensis]
          Length = 339

 Score =  218 bits (555), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 134/320 (41%), Positives = 177/320 (55%), Gaps = 30/320 (9%)

Query: 56  FKSKFSKTYATQEEHDYRFRVFKANLRR-AKRRQLL---DPTAVHGVTKFSDLTPSEFRR 111
           FK +  KTY  + E  +R ++F  N  + AK  Q     + T    V K++D+   EFR 
Sbjct: 30  FKLEHRKTYQDETEERFRLKIFNENKHKIAKHNQRYATGEVTFKMAVNKYADMLHHEFRE 89

Query: 112 QFLGLN----RRLRL--PADAQKAPILPTN-DLPTDFDWRDHGAVTGVKDQGACGSCWSF 164
              G N    + LR   P+      I P +  LP   DWR+ GAVT VKDQG CGSCW+F
Sbjct: 90  TMNGFNYTLHKELRASDPSFTGITFISPAHVKLPKSVDWREKGAVTAVKDQGHCGSCWAF 149

Query: 165 SATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAG 224
           S+TGALEG HF  TG LVSLSEQ LVDC        +   ++GCNGGLM++AF YI   G
Sbjct: 150 SSTGALEGQHFRKTGTLVSLSEQNLVDC-------SAKYGNNGCNGGLMDNAFRYIKDNG 202

Query: 225 GVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVI-SSDEDQMAANLVKHGPLAVGINAV 283
           G++ EK YPY G D  SC F+K  + A    F+ I   +E +MA  +   GP++V I+A 
Sbjct: 203 GIDTEKSYPYEGID-DSCHFNKDSVGATDRGFADIPQGNEKKMAEAVATIGPVSVAIDAS 261

Query: 284 W--MQTYIGGV-SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGEN 340
               Q Y  G+ + P    + LDHGVL+VGYG+          K YW++KNSWG  WG+ 
Sbjct: 262 HESFQFYSEGIYNEPECNSQNLDHGVLVVGYGTDESG------KDYWLVKNSWGTTWGDK 315

Query: 341 GYYKICMGR-NVCGVDSMVS 359
           G+ K+     N CG+ S  S
Sbjct: 316 GFIKMARNEDNQCGIASASS 335


>gi|195056367|ref|XP_001995082.1| GH22826 [Drosophila grimshawi]
 gi|193899288|gb|EDV98154.1| GH22826 [Drosophila grimshawi]
          Length = 340

 Score =  218 bits (555), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 134/323 (41%), Positives = 175/323 (54%), Gaps = 30/323 (9%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRR-AKRRQLLDPTAVH---GVTKFSDLTPSE 108
           +  FK +  K Y  + E  +R ++F  N  + AK  QL     V    G+ K++D+   E
Sbjct: 28  WQTFKLEHRKQYQDETEERFRLKIFNENKHKIAKHNQLYAAGEVSFKMGLNKYADMLHHE 87

Query: 109 FRRQFLGLNRRLRLPADAQKAP------ILPTN-DLPTDFDWRDHGAVTGVKDQGACGSC 161
           F     G N  L     A  A       I P +  LP   DWR+ GAVTGVKDQG CGSC
Sbjct: 88  FHETMNGFNYTLHKQLRASDATFTGVTFISPEHVKLPQSVDWRNKGAVTGVKDQGHCGSC 147

Query: 162 WSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYIL 221
           W+FS+TGALEG HF  TG L+SLSEQ LVDC        +   ++GCNGGLM++AF YI 
Sbjct: 148 WAFSSTGALEGQHFRKTGTLISLSEQNLVDC-------STKYGNNGCNGGLMDNAFRYIK 200

Query: 222 KAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVI-SSDEDQMAANLVKHGPLAVGI 280
             GG++ EK YPY G D  SC F+K  I A    F+ I   DE ++A  +   GP++V I
Sbjct: 201 DNGGIDTEKSYPYEGID-DSCHFNKGTIGATDRGFTDIPQGDEKKLAQAVATIGPVSVAI 259

Query: 281 NAVW--MQTYIGGVSCPYICG-KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENW 337
           +A     Q Y  GV     C  + LDHGVL+VGYG+          K YW++KNSWG  W
Sbjct: 260 DASHESFQFYSTGVYDEPQCDPQNLDHGVLVVGYGTDE------NGKDYWLVKNSWGTTW 313

Query: 338 GENGYYKICMG-RNVCGVDSMVS 359
           G+ G+ K+     N CG+ +  S
Sbjct: 314 GDKGFIKMARNDDNQCGIATASS 336


>gi|18407961|ref|NP_566880.1| thiol protease aleurain-like protein [Arabidopsis thaliana]
 gi|73622182|sp|Q8RWQ9.1|ALEUL_ARATH RecName: Full=Thiol protease aleurain-like; Flags: Precursor
 gi|20147207|gb|AAM10319.1| AT3g45310/F18N11_70 [Arabidopsis thaliana]
 gi|332644500|gb|AEE78021.1| thiol protease aleurain-like protein [Arabidopsis thaliana]
          Length = 358

 Score =  218 bits (555), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 142/365 (38%), Positives = 200/365 (54%), Gaps = 33/365 (9%)

Query: 3   RLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPS--DGEQSEDHLLNAEHH---FSLFK 57
           +L LSS +LL+L +  AS     D+   I+ V  +  + E +   +L    H   FS F 
Sbjct: 4   KLNLSSSILLILFAAAASKEIGFDESNPIKMVSDNLHELEDTVVQILGQSRHVLSFSRFT 63

Query: 58  SKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLN 117
            ++ K Y + EE   RF VFK NL   +       +    + +F+DLT  EF+R  LG  
Sbjct: 64  HRYGKKYQSVEEMKLRFSVFKENLDLIRSTNKKGLSYKLSLNQFADLTWQEFQRYKLGAA 123

Query: 118 RRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLS 177
           +     A  + +  +    +P   DWR+ G V+ VK+QG CGSCW+FS TGALE A+  +
Sbjct: 124 QNC--SATLKGSHKITEATVPDTKDWREDGIVSPVKEQGHCGSCWTFSTTGALEAAYHQA 181

Query: 178 TGELVSLSEQQLVDCDHECDPEESGSCDS-GCNGGLMNSAFEYILKAGGVEREKDYPYTG 236
            G+ +SLSEQQLVDC        +G+ ++ GC+GGL + AFEYI   GG++ E+ YPYTG
Sbjct: 182 FGKGISLSEQQLVDC--------AGTFNNFGCHGGLPSQAFEYIKYNGGLDTEEAYPYTG 233

Query: 237 TDGGSCKFDKSKIAAAVS---NFSVISSDEDQMAANLVKHGPLAVGINAVW-MQTYIGGV 292
            DGG CKF    I   V    N ++ + DE + A  LV+  P++V    V   + Y  GV
Sbjct: 234 KDGG-CKFSAKNIGVQVRDSVNITLGAEDELKHAVGLVR--PVSVAFEVVHEFRFYKKGV 290

Query: 293 SCPYICGKY---LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR 349
                CG     ++H VL VGYG          + PYW+IKNSWG  WG+NGY+K+ MG+
Sbjct: 291 FTSNTCGNTPMDVNHAVLAVGYGVE-------DDVPYWLIKNSWGGEWGDNGYFKMEMGK 343

Query: 350 NVCGV 354
           N+CGV
Sbjct: 344 NMCGV 348


>gi|401416324|ref|XP_003872657.1| putative cathepsin L-like protease [Leishmania mexicana
           MHOM/GT/2001/U1103]
 gi|322488881|emb|CBZ24131.1| putative cathepsin L-like protease [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 443

 Score =  218 bits (555), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 133/331 (40%), Positives = 178/331 (53%), Gaps = 31/331 (9%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           F  FK  + + Y T  E   R   F+ NL   +  Q  +P A  G+TKF DL+ +EF  +
Sbjct: 38  FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFAAR 97

Query: 113 FLG----LNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATG 168
           +L          R  A   +      + +P   DWR+ GAVT VKDQGACGSCW+FSA G
Sbjct: 98  YLNGAAYFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAFSAVG 157

Query: 169 ALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK--AGGV 226
            +EG  +L+  ELVSLSEQQLV CD   D         GC+GGLM  AF+++L+   G +
Sbjct: 158 NIEGQWYLAGHELVSLSEQQLVSCDDMND---------GCDGGLMLQAFDWLLQNTNGHL 208

Query: 227 EREKDYPYTGTDGGSCKFDKSK---IAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAV 283
             E  YPY   +G   +   S    + A +    +I S E  MAA L K+GP+A+ ++A 
Sbjct: 209 HTEDSYPYVSGNGYVPECSNSSELVVGAQIDGHVLIGSSEKAMAAWLAKNGPIAIALDAS 268

Query: 284 WMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYY 343
              +Y  GV    I GK L+HGVL+VGY  +G       E PYW+IKNSWG +WGE GY 
Sbjct: 269 SFMSYKSGVLTACI-GKQLNHGVLLVGYDMTG-------EVPYWVIKNSWGGDWGEQGYV 320

Query: 344 KICMGRNVC-----GVDSMVSSVAAIHTTSS 369
           ++ MG N C      V + V   AA  T++S
Sbjct: 321 RVVMGVNACLLSEYPVSAHVRESAAPGTSTS 351


>gi|16304178|gb|AAL16954.1|AF426414_1 cathepsin L-like cysteine protease precursor [Delia radicum]
          Length = 337

 Score =  218 bits (554), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 131/321 (40%), Positives = 175/321 (54%), Gaps = 28/321 (8%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRR-AKRRQLLDPTAVH---GVTKFSDLTPSE 108
           +  FK +  K + ++ E  +R ++F  N  + AK  QL     V    G+ K+SD+   E
Sbjct: 27  WQTFKMEHRKNFLSEVEERFRMKIFNENRHKIAKHNQLYAQGKVSFKLGLNKYSDMLYHE 86

Query: 109 FRRQFLGLNRRLRLPADAQKAP----ILPTN-DLPTDFDWRDHGAVTGVKDQGACGSCWS 163
           F+    G N  +R    AQ       I P N  +P   DWR HGAVT VKDQG CGSCW+
Sbjct: 87  FKETMNGYNHTMRKVLRAQGFSGIIYIPPANVQIPKSVDWRQHGAVTAVKDQGHCGSCWA 146

Query: 164 FSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA 223
           FS+T ALEG HF   G LVSLSEQ LVDC        +   ++GCNGGLM++AF YI   
Sbjct: 147 FSSTAALEGQHFRKAGVLVSLSEQNLVDC-------STKYGNNGCNGGLMDNAFRYIKDN 199

Query: 224 GGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVGINA 282
           GG++ EK YPY G D  SC F KS + A  + F  +   DE+ +   +   GP++V I+A
Sbjct: 200 GGIDTEKSYPYEGID-DSCHFTKSGVGATDTGFVDIPQGDEEALMKAVATMGPVSVAIDA 258

Query: 283 VW--MQTYIGGV-SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGE 339
                Q Y  GV + P    + LDHGVL+VGYG+            YW++KNSWG  WG+
Sbjct: 259 SHESFQLYSEGVYNEPECDAQNLDHGVLVVGYGTDKTGL------DYWLVKNSWGTTWGD 312

Query: 340 NGYYKICMGR-NVCGVDSMVS 359
            GY K+   + N CG+ +  S
Sbjct: 313 QGYIKMARNQDNQCGIATASS 333


>gi|1730100|sp|P36400.2|LMCPB_LEIME RecName: Full=Cysteine proteinase B; Flags: Precursor
 gi|899313|emb|CAA90236.1| LmCPb2.8 [Leishmania mexicana]
          Length = 443

 Score =  218 bits (554), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 133/331 (40%), Positives = 178/331 (53%), Gaps = 31/331 (9%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           F  FK  + + Y T  E   R   F+ NL   +  Q  +P A  G+TKF DL+ +EF  +
Sbjct: 38  FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFAAR 97

Query: 113 FLG----LNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATG 168
           +L          R  A   +      + +P   DWR+ GAVT VKDQGACGSCW+FSA G
Sbjct: 98  YLNGAAYFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAFSAVG 157

Query: 169 ALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK--AGGV 226
            +EG  +L+  ELVSLSEQQLV CD   D         GC+GGLM  AF+++L+   G +
Sbjct: 158 NIEGQWYLAGHELVSLSEQQLVSCDDMND---------GCDGGLMLQAFDWLLQNTNGHL 208

Query: 227 EREKDYPYTGTDGGSCKFDKSK---IAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAV 283
             E  YPY   +G   +   S    + A +    +I S E  MAA L K+GP+A+ ++A 
Sbjct: 209 HTEDSYPYVSGNGYVPECSNSSELVVGAQIDGHVLIGSSEKAMAAWLAKNGPIAIALDAS 268

Query: 284 WMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYY 343
              +Y  GV    I GK L+HGVL+VGY  +G       E PYW+IKNSWG +WGE GY 
Sbjct: 269 SFMSYKSGVLTACI-GKQLNHGVLLVGYDMTG-------EVPYWVIKNSWGGDWGEQGYV 320

Query: 344 KICMGRNVC-----GVDSMVSSVAAIHTTSS 369
           ++ MG N C      V + V   AA  T++S
Sbjct: 321 RVVMGVNACLLSEYPVSAHVRESAAPGTSTS 351


>gi|461905|sp|Q05094.1|CYSP2_LEIPI RecName: Full=Cysteine proteinase 2; AltName: Full=Amastigote
           cysteine proteinase A-2; Flags: Precursor
 gi|159298|gb|AAA29229.1| cysteine proteinase [Leishmania pifanoi]
          Length = 444

 Score =  218 bits (554), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 133/332 (40%), Positives = 178/332 (53%), Gaps = 32/332 (9%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           F  FK  + + Y T  E   R   F+ NL   +  Q  +P A  G+TKF DL+ +EF  +
Sbjct: 38  FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFAAR 97

Query: 113 FLG----LNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATG 168
           +L          R  A   +      + +P   DWR+ GAVT VKDQGACGSCW+FSA G
Sbjct: 98  YLNGAAYFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAFSAVG 157

Query: 169 ALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK--AGGV 226
            +EG  +L+  ELVSLSEQQLV CD   D         GC+GGLM  AF+++L+   G +
Sbjct: 158 NIEGQWYLAGHELVSLSEQQLVSCDDMND---------GCDGGLMLQAFDWLLQNTNGHL 208

Query: 227 EREKDYPYTGTDGGSCKFDKSK----IAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA 282
             E  YPY   +G   +   S     + A +    +I S E  MAA L K+GP+A+ ++A
Sbjct: 209 HTEDSYPYVSGNGYVPECSNSSEELVVGAQIDGHVLIGSSEKAMAAWLAKNGPIAIALDA 268

Query: 283 VWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGY 342
               +Y  GV    I GK L+HGVL+VGY  +G       E PYW+IKNSWG +WGE GY
Sbjct: 269 SSFMSYKSGVLTACI-GKQLNHGVLLVGYDMTG-------EVPYWVIKNSWGGDWGEQGY 320

Query: 343 YKICMGRNVC-----GVDSMVSSVAAIHTTSS 369
            ++ MG N C      V + V   AA  T++S
Sbjct: 321 VRVVMGVNACLLSEYPVSAHVRESAAPGTSTS 352


>gi|229893789|gb|ACQ90252.1| cathepsin L [Pinctada fucata]
          Length = 362

 Score =  218 bits (554), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 137/316 (43%), Positives = 175/316 (55%), Gaps = 28/316 (8%)

Query: 56  FKSKFSKTYATQEEHDYRFRVFKANLRRA----KRRQLLDPTAVHGVTKFSDLTPSEFRR 111
           FK+ F K Y T EE   RF +F+  L R     ++  +   +   GV +FSD++  E+ R
Sbjct: 57  FKTLFGKVYDTVEEEIKRFDIFRDTLERIEEHNRKYHMGQKSYYMGVNQFSDMSHDEYLR 116

Query: 112 QFLGLNRRLRLPADAQ--KAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGA 169
              GL R  R  +  +   +       L    DWRD G VT VK+QG CGSCWSFS TG+
Sbjct: 117 HN-GLRRGNRKYSKGEGCDSYTKSGKQLDDKVDWRDKGYVTPVKNQGQCGSCWSFSTTGS 175

Query: 170 LEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSC-DSGCNGGLMNSAFEYILKAGGVER 228
           LEG HF  TG+L+SLSEQQLVDC        SG+  + GCNGGLM++AFEYI   GG+E 
Sbjct: 176 LEGQHFRQTGKLISLSEQQLVDC--------SGTFGNEGCNGGLMDNAFEYIKSIGGLEG 227

Query: 229 EKDYPYTGTDGGSCKFDKSKIAAAVSNFS-VISSDEDQMAANLVKHGPLAVGINA--VWM 285
           E DYPYT    G C   KS   A  +  + V S DED +   L   GP++V I+A     
Sbjct: 228 EDDYPYTAKQ-GKCHLKKSLFKANDTGCTDVESGDEDALKDALASVGPISVAIDASHASF 286

Query: 286 QTYIGGVSCPYIC-GKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYK 344
           Q+Y GGV     C  + LDHGVL VGYG+            YW++KNSWGE WGE GY K
Sbjct: 287 QSYDGGVYDEEECSSQNLDHGVLTVGYGTEENGG------DYWLVKNSWGEMWGEEGYIK 340

Query: 345 ICMGR-NVCGVDSMVS 359
           +   + N CG+ +  S
Sbjct: 341 MSRNKDNQCGIATQAS 356


>gi|8347420|dbj|BAA96501.1| cysteine protease [Nicotiana tabacum]
          Length = 360

 Score =  218 bits (554), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 143/376 (38%), Positives = 200/376 (53%), Gaps = 38/376 (10%)

Query: 1   MERLILSSLLLL---LLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNA---EHH-- 52
           M R  L   L++   L +S LA      D++  IRQVV     + E+ +L       H  
Sbjct: 1   MSRFSLLLALVVAGGLFASALAGPATFADENP-IRQVVSDGLHELENAILQVVGKTRHAL 59

Query: 53  -FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRR 111
            F+ F  ++ K Y + EE   RF VF  NL+  +       +   GV +F+DLT  EFRR
Sbjct: 60  SFARFAHRYGKRYESVEEIKQRFEVFLDNLKMIRSHNKKGLSYKLGVNEFTDLTWDEFRR 119

Query: 112 QFLGLNRRLRLPADAQKAPILPTND-LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGAL 170
             LG  +     +   K  +  TN  LP   DWR+ G V+ VK+QG CGSCW+FS TGAL
Sbjct: 120 DRLGAAQNC---SATTKGNLKVTNVVLPETKDWREAGIVSPVKNQGKCGSCWTFSTTGAL 176

Query: 171 EGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREK 230
           E A+  + G+ +SLSEQQLVDC    +       + GCNGGL + AFEYI   GG++ E+
Sbjct: 177 EAAYSQAFGKGISLSEQQLVDCAGAFN-------NFGCNGGLPSQAFEYIKSNGGLDTEE 229

Query: 231 DYPYTGTDGGSCKFDKSKIAAAV---SNFSVISSDEDQMAANLVKHGPLAVGINAV-WMQ 286
            YPYTG + G CKF    +   V    N ++ + DE + A  LV+  P+++    +   +
Sbjct: 230 AYPYTGKN-GLCKFSSENVGVKVIDSVNITLGAEDELKYAVALVR--PVSIAFEVIKGFK 286

Query: 287 TYIGGVSCPYICGKY---LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYY 343
            Y  GV     CG     ++H VL VGYG            PYW+IKNSWG +WG+NGY+
Sbjct: 287 QYKSGVYTSTECGNTPMDVNHAVLAVGYGVENGV-------PYWLIKNSWGADWGDNGYF 339

Query: 344 KICMGRNVCGVDSMVS 359
           K+ MG+N+CG+ +  S
Sbjct: 340 KMEMGKNMCGIATCAS 355


>gi|146216004|gb|ABQ10204.1| cysteine protease Cp6 [Actinidia deliciosa]
          Length = 461

 Score =  218 bits (554), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 124/307 (40%), Positives = 170/307 (55%), Gaps = 29/307 (9%)

Query: 59  KFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLN- 117
           K  K+Y    E + RF++FK NLR          T   G+ +F+DLT  E+R  +LG   
Sbjct: 52  KHGKSYNAIGEKEKRFQIFKDNLRFIDEHNAESRTYKVGLNRFADLTNDEYRSMYLGART 111

Query: 118 ---RRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAH 174
              RRL     + +   +    LP   DWR+ GAV GVKDQG+CGSCW+FS   A+EG +
Sbjct: 112 GSRRRLSTQKRSDRYVPVAGESLPDSVDWREKGAVVGVKDQGSCGSCWAFSTIAAVEGIN 171

Query: 175 FLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPY 234
            + TG+L+SLSEQ+LVDCD         S + GCNGGLM+ AFE+I+K GG++ E+DYPY
Sbjct: 172 QIVTGDLISLSEQELVDCDT--------SYNEGCNGGLMDYAFEFIIKNGGIDTEEDYPY 223

Query: 235 TGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWM--QTYIGGV 292
              DG   ++ K+     + ++  +  + +Q     V + P++V I A  M  Q Y  GV
Sbjct: 224 NARDGRCDQYRKNAKVVTIDDYEDVPVNNEQALQKAVANQPVSVAIEASGMAFQFYESGV 283

Query: 293 SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNV- 351
                CG  LDHGV  VGYG+            YWI+KNSWG +WGE+GY +  M RN  
Sbjct: 284 FTGN-CGTALDHGVTAVGYGTE-------NSVDYWIVKNSWGSSWGESGYIR--MERNTG 333

Query: 352 ----CGV 354
               CG+
Sbjct: 334 ATGKCGI 340


>gi|358339356|dbj|GAA47436.1| cathepsin L [Clonorchis sinensis]
          Length = 236

 Score =  218 bits (554), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 110/240 (45%), Positives = 152/240 (63%), Gaps = 18/240 (7%)

Query: 124 ADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVS 183
           ++  K    PT  LP  FDWR HG VT VKDQG CGSCW+F+ TG +EG  +  T +LVS
Sbjct: 8   SNRPKVTSYPTQSLPGSFDWRQHGVVTEVKDQGMCGSCWAFAVTGNIEGQWYKKTKKLVS 67

Query: 184 LSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCK 243
           LSEQQL+DCD +         D  CNGG    A+E I+K GG+  EKDYPY      +C 
Sbjct: 68  LSEQQLLDCDKK---------DEACNGGFPEWAYESIVKMGGLMSEKDYPYEAHK-ETCN 117

Query: 244 FDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCP--YICGKY 301
              + I+A +++   +S DE ++AA L ++GP++VG+NA ++Q Y GGVS P   +C + 
Sbjct: 118 LKPNNISAYINDSVTLSKDEKELAAWLTENGPISVGMNANFLQFYFGGVSHPPHMLCSEQ 177

Query: 302 -LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSS 360
            LDH VL+VGYG + F      ++PYWI+KNSWG +WGE GY++I  G   CG+++  +S
Sbjct: 178 GLDHAVLLVGYGVTSFW-----QRPYWIVKNSWGRSWGEKGYFRIYRGDGTCGINADATS 232


>gi|300175452|emb|CBK20763.2| unnamed protein product [Blastocystis hominis]
          Length = 313

 Score =  217 bits (553), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 129/321 (40%), Positives = 174/321 (54%), Gaps = 36/321 (11%)

Query: 47  LNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTP 106
           L  E+ F+ F++++ K Y    E  +R +VF  N+  A++    D     G T F+D+T 
Sbjct: 17  LRYENTFNSFEARYGKNYINAAERAFRQKVFAYNMEWAQKINSEDHPYTVGATPFADMTN 76

Query: 107 SEFRRQFLG---LNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWS 163
           +EF    L    L  ++  PA     PI+         DWR+ GAVT VK+Q +CGSCW+
Sbjct: 77  TEFAVSKLCGCMLKPKMTKPA----TPIM--EPAAEAVDWREKGAVTPVKNQASCGSCWA 130

Query: 164 FSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA 223
           FSATGA+EG +F++ GEL+SLSEQQLVDCDH+          SGC GGLM  AFEY  K 
Sbjct: 131 FSATGAMEGRNFVANGELISLSEQQLVDCDHQ---------SSGCGGGLMTYAFEY-AKK 180

Query: 224 GGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA- 282
            G+ +E+DYPY   D   CK DK         +  +   +       V  GP++V + A 
Sbjct: 181 KGMCKEEDYPYHAVD-EDCKDDKCTPVVFPKGYEEVPRFDGAALKQAVSQGPVSVAVEAD 239

Query: 283 -VWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENG 341
            +  Q Y GGV     CG  L+HGVL VGYG+            YWI+KNSWGE+WG+ G
Sbjct: 240 SIVFQMYTGGVIDSSACGTSLNHGVLAVGYGAD-----------YWIVKNSWGESWGDKG 288

Query: 342 YYKICM---GRNVCGVDSMVS 359
           Y KI     G  +CG++ M S
Sbjct: 289 YLKIKYTESGAGICGINQMNS 309


>gi|2780176|emb|CAA71085.1| cystein proteinase [Leishmania mexicana]
          Length = 443

 Score =  217 bits (553), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 132/331 (39%), Positives = 179/331 (54%), Gaps = 31/331 (9%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           F  FK  + + Y T  E   R   F+ NL   +  Q  +P A  G+TKF DL+ +EF  +
Sbjct: 38  FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFAAR 97

Query: 113 FLG----LNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATG 168
           +L          R  A   +      + +P   DWR+ GAVT VK+QGACGSCW+FSA G
Sbjct: 98  YLNGAAYFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSCWAFSAVG 157

Query: 169 ALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK--AGGV 226
            +EG  +L+  ELVSLSEQQLV CD           D+GC+GGLM  AF+++L+   G +
Sbjct: 158 NIEGQWYLAGHELVSLSEQQLVSCD---------DMDNGCSGGLMLQAFDWLLQNTNGHL 208

Query: 227 EREKDYPYTGTDGGSCKFDKSK---IAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAV 283
             E  YPY   +G   +   S    + A +    +I S E  MAA L K+GP+A+ ++A 
Sbjct: 209 YTEDSYPYVSGNGYVPECSNSSELVVGAQIDGHVLIGSSEKAMAAWLAKNGPIAIALDAS 268

Query: 284 WMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYY 343
              +Y  GV    I GK L+HGVL+VGY  +G       E PYW+IKNSWG +WGE GY 
Sbjct: 269 SFMSYKSGVLTACI-GKQLNHGVLLVGYDMTG-------EVPYWVIKNSWGGDWGEQGYV 320

Query: 344 KICMGRNVC-----GVDSMVSSVAAIHTTSS 369
           ++ MG N C      V + V   AA  T++S
Sbjct: 321 RVVMGVNACLLSEYPVSAHVRESAAPGTSTS 351


>gi|161598418|gb|ABX74953.1| cysteine protease [Leishmania panamensis]
          Length = 441

 Score =  217 bits (553), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 124/319 (38%), Positives = 172/319 (53%), Gaps = 30/319 (9%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           F  FK  + + YAT  E   R   F+ NL   +  Q  +P A  G+TKF DL+ +EF  +
Sbjct: 38  FEEFKQTYKRVYATLAEEQQRVANFQRNLELMREHQANNPHARFGITKFFDLSEAEFATR 97

Query: 113 FLG----LNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATG 168
           +L       +  +  +   +      +  P   DWR  GAVT V DQGACGSCW+FSA G
Sbjct: 98  YLSGATHFAKAKKFASQHYRKVGADLSTAPAAVDWRQMGAVTPVNDQGACGSCWAFSAIG 157

Query: 169 ALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYIL--KAGGV 226
            +E   +++T  L++LSEQ+LV CD           D GCNGGLM  AF+++L  K G V
Sbjct: 158 NIESQWYVTTHSLITLSEQELVSCD---------DVDEGCNGGLMLQAFDWLLNNKNGAV 208

Query: 227 EREKDYPYTGTDGGSCKFDKSK---IAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAV 283
                YPY   +G   +  +S    + A +     I S+ED MAA L  +GP+A+ ++A 
Sbjct: 209 YTGASYPYVSGNGSVPECSESSELVVGAYIDGHVTIESNEDTMAAWLAVNGPIAIAVDAS 268

Query: 284 WMQTYIGGV--SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENG 341
              +Y GG+  SC    G+ L+HGVL+VGY  +G       E PYW+IKNSWGENWGE G
Sbjct: 269 AFMSYTGGILTSCD---GRQLNHGVLLVGYNMTG-------EVPYWLIKNSWGENWGEKG 318

Query: 342 YYKICMGRNVCGVDSMVSS 360
           Y ++  G N C +    +S
Sbjct: 319 YVRVRKGTNECLIQEYPAS 337


>gi|401430350|ref|XP_003886559.1| unnamed protein product, partial [Leishmania mexicana
           MHOM/GT/2001/U1103]
 gi|356491516|emb|CBZ40966.1| unnamed protein product, partial [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 503

 Score =  217 bits (552), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 133/331 (40%), Positives = 178/331 (53%), Gaps = 31/331 (9%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           F  FK  + + Y T  E   R   F+ NL   +  Q  +P A  G+TKF DL+ +EF  +
Sbjct: 98  FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFAAR 157

Query: 113 FLG----LNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATG 168
           +L          R  A   +      + +P   DWR+ GAVT VKDQGACGSCW+FSA G
Sbjct: 158 YLNGAAYFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAFSAVG 217

Query: 169 ALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK--AGGV 226
            +EG  +L+  ELVSLSEQQLV CD   D         GC+GGLM  AF+++L+   G +
Sbjct: 218 NIEGQWYLAGHELVSLSEQQLVSCDDMND---------GCDGGLMLQAFDWLLQNTNGHL 268

Query: 227 EREKDYPYTGTDGGSCKFDKSK---IAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAV 283
             E  YPY   +G   +   S    + A +    +I S E  MAA L K+GP+A+ ++A 
Sbjct: 269 YTEDSYPYVSGNGYVPECSNSSELVVGAQIDGHVLIGSSEKAMAAWLAKNGPIAIALDAS 328

Query: 284 WMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYY 343
              +Y  GV    I GK L+HGVL+VGY  +G       E PYW+IKNSWG +WGE GY 
Sbjct: 329 SFMSYKSGVLTACI-GKQLNHGVLLVGYDMTG-------EVPYWVIKNSWGGDWGEQGYV 380

Query: 344 KICMGRNVC-----GVDSMVSSVAAIHTTSS 369
           ++ MG N C      V + V   AA  T++S
Sbjct: 381 RVVMGVNACLLSEYPVSAHVRESAAPGTSTS 411


>gi|344271925|ref|XP_003407787.1| PREDICTED: cathepsin L1-like [Loxodonta africana]
          Length = 333

 Score =  217 bits (552), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 129/323 (39%), Positives = 175/323 (54%), Gaps = 22/323 (6%)

Query: 44  DHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVT---- 99
           D  L+A+  ++ ++S + K YA  EE D+R  V++ N++  +R         HG T    
Sbjct: 22  DQSLDAQ--WNQWRSTYKKVYAVNEE-DWRRAVWEKNMKMIERHNQEYSQGKHGFTMAMN 78

Query: 100 KFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACG 159
            F D T  EFR+   G   +          P+     +PT  DW   G VT VKDQG CG
Sbjct: 79  AFGDKTNEEFRQLMNGFQSQKHKKGKLFYEPVF--GHIPTSVDWTQKGYVTPVKDQGQCG 136

Query: 160 SCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEY 219
           SCW+FSATGALEG  F  TG+LVSLSEQ LVDC            + GCNGGLM++AF+Y
Sbjct: 137 SCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSWR-------EGNEGCNGGLMDNAFQY 189

Query: 220 ILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVG 279
           +   GG++ E+ YPYT TD   C+++    AA  + F  I   E  +   +   GP++V 
Sbjct: 190 VKDNGGLDSEESYPYTATDTQDCRYNPKYSAANDTGFVDIPPQEKALMKAVATVGPISVA 249

Query: 280 INA--VWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENW 337
           I+A  V  Q Y  G+     C   ++HGVL VGYG  G  P + K   YW++KNSWG++W
Sbjct: 250 IDAGQVSFQFYSSGIYFDPACRLTVNHGVLAVGYGFEGTDPDKNK---YWLVKNSWGKSW 306

Query: 338 GENGYYKICMGRNV-CGVDSMVS 359
           G +GY KI   RN  CG+    S
Sbjct: 307 GADGYIKIAKDRNNHCGIARAAS 329


>gi|353441042|gb|AEQ94105.1| putative drought-inducible cysteine proteinase [Elaeis guineensis]
          Length = 187

 Score =  217 bits (552), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 115/175 (65%), Positives = 138/175 (78%), Gaps = 7/175 (4%)

Query: 11  LLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHL-LNAEHHFSLFKSKFSKTYATQEE 69
           + L +SV +S  +  +DD +I QVVP   E  ED L LNAE HFS F  +F K+YA ++E
Sbjct: 15  VALSASVASSWPSYAEDDPLIVQVVP---ESDEDELRLNAEAHFSSFLRRFGKSYADEKE 71

Query: 70  HDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLP---ADA 126
           H YRF VFKANLRRA+R Q +DPTAVHG+TKFSDLTP+EFRR +LGL    RL    A +
Sbjct: 72  HAYRFSVFKANLRRARRHQKMDPTAVHGITKFSDLTPAEFRRTYLGLRGGRRLRRALASS 131

Query: 127 QKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGEL 181
            +APILPTN+LPTDFDWRDHGAVTGVKDQG+CGSCWSFSA+GALEGA+FL+TG+L
Sbjct: 132 HEAPILPTNNLPTDFDWRDHGAVTGVKDQGSCGSCWSFSASGALEGANFLATGQL 186


>gi|281204396|gb|EFA78592.1| cysteine proteinase 3 [Polysphondylium pallidum PN500]
          Length = 330

 Score =  217 bits (552), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 134/334 (40%), Positives = 185/334 (55%), Gaps = 32/334 (9%)

Query: 39  GEQSEDHLLNAEHH---FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAV 95
           G  S + L + +H+   F+ +  +  + Y   E  D R+  FK NL    +      + V
Sbjct: 12  GIASANRLFSEQHYQNQFTNWMVRLDRAYDVFEFQD-RYNAFKNNLDLIHKWNSQGHSTV 70

Query: 96  HGVTKFSDLTPSEFRRQFLGLNRRL-RLPADAQKAPILPTNDL----PTDFDWRDHGAVT 150
            GV   +DL+  E+R  +LG+     RLP   Q+A  +  N +        DWR  GAV 
Sbjct: 71  LGVNHLADLSNEEYRNLYLGVKVDASRLP---QQAASIKLNKVFAPVAASLDWRSSGAVG 127

Query: 151 GVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNG 210
            VKDQG CGSCWSFS TG++EGA+ ++TG   SLSEQQL+DC  +   E       GCNG
Sbjct: 128 RVKDQGQCGSCWSFSTTGSIEGANQIATGNFASLSEQQLMDCSRDYGNE-------GCNG 180

Query: 211 GLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAAN 269
           GLM++A +Y++  GG++ E+ YPYT +D  +CKF+ + I A +S++  V    E  +AA 
Sbjct: 181 GLMDAAMKYVIAQGGLDTEESYPYTMSDSYTCKFNPANIGAKISSYIDVQRGSETDLAAK 240

Query: 270 LVKHGPLAVGINAVW--MQTYIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPY 326
           L K GP++V I+A     Q Y  GV     C  Y LDHGVL VGYG+ G          Y
Sbjct: 241 LNK-GPVSVAIDASHSSFQLYKSGVYYEPACSSYNLDHGVLAVGYGTEG-------SSNY 292

Query: 327 WIIKNSWGENWGENGYYKICMGR-NVCGVDSMVS 359
           WI+KNSWG NWG +GY  +   + N CG+ SM S
Sbjct: 293 WIVKNSWGPNWGLSGYIWMAKDKSNHCGISSMAS 326


>gi|241062152|gb|ACS66748.1| cysteine protease [Leishmania guyanensis]
          Length = 441

 Score =  217 bits (552), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 123/311 (39%), Positives = 169/311 (54%), Gaps = 30/311 (9%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           F  FK  + + YAT  E   R   F+ NL   +  Q  +P A  G+TKF DL+ +EF  +
Sbjct: 38  FEEFKQTYKRVYATLAEEQQRVANFQRNLELMREHQANNPHARFGITKFFDLSEAEFATR 97

Query: 113 FLG----LNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATG 168
           +L       +  +  +   +      +  P   DWR  GAVT VKDQGACGSCW+ SA G
Sbjct: 98  YLSGATHFAKAKKFASQHYRKVGADLSTAPAAVDWRQMGAVTPVKDQGACGSCWALSAIG 157

Query: 169 ALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYIL--KAGGV 226
            +E   +++T  L++LSEQ+LV CD           D GCNGGLM  AF+++L  K G V
Sbjct: 158 NIESQWYVTTHSLITLSEQELVSCD---------DVDEGCNGGLMLQAFDWLLNNKNGAV 208

Query: 227 EREKDYPYTGTDGGSCKFDKSK---IAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAV 283
                YPY   +G   +  +S    + A +     I S+ED MAA L  +GP+A+ ++A 
Sbjct: 209 YTGASYPYVSGNGSVPECSESSELVVGAYIDGHVTIESNEDTMAAWLAVNGPIAIAVDAS 268

Query: 284 WMQTYIGGV--SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENG 341
              +Y GG+  SC    G+ L+HGVL+VGY  +G       E PYW+IKNSWGENWGE G
Sbjct: 269 AFMSYTGGILTSCD---GRQLNHGVLLVGYNMTG-------EVPYWLIKNSWGENWGEKG 318

Query: 342 YYKICMGRNVC 352
           Y ++  G N C
Sbjct: 319 YVRVRKGTNEC 329


>gi|171702843|dbj|BAG16377.1| cysteine protease [Brassica rapa var. perviridis]
          Length = 431

 Score =  217 bits (552), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 118/295 (40%), Positives = 168/295 (56%), Gaps = 20/295 (6%)

Query: 59  KFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNR 118
           K  K   +  E D RF +FK NLR        + +   G+TKF+DLT  E+R  +LG   
Sbjct: 48  KHGKAQNSLTEKDRRFEIFKDNLRFIDEHNGKNLSYRLGLTKFADLTNDEYRSMYLGSRL 107

Query: 119 RLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLST 178
           + +    + +      + +P   DWR  GAV  VKDQG+CGSCW+FS  GA+EG + + T
Sbjct: 108 KRKATKTSLRYEARVGDAIPESVDWRKEGAVAEVKDQGSCGSCWAFSTIGAVEGINKIVT 167

Query: 179 GELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTD 238
           G+L+SLSEQ+LVDCD         S + GCNGGLM+ AFE+I+K GG++ E+DYPY G D
Sbjct: 168 GDLISLSEQELVDCDT--------SYNEGCNGGLMDYAFEFIIKNGGIDTEEDYPYKGVD 219

Query: 239 GGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGIN--AVWMQTYIGGVSCPY 296
           G   +  K+     + ++  + ++ ++     + H P++V I       Q Y  G+    
Sbjct: 220 GRCDQTRKNAKVVTIDSYEDVPANSEESLKKALSHQPISVAIEGGGRAFQLYDSGIF-DG 278

Query: 297 ICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNV 351
           ICG  LDHGV+ VGYG+          K YWI+KNSWG +WGE+GY +  M RN+
Sbjct: 279 ICGTDLDHGVVAVGYGTE-------NGKDYWIVKNSWGTSWGESGYIR--MERNI 324


>gi|77379397|gb|ABA71355.1| cysteine protease [Brassica napus]
          Length = 359

 Score =  217 bits (552), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 137/369 (37%), Positives = 196/369 (53%), Gaps = 31/369 (8%)

Query: 3   RLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPS--DGEQSEDHLLNAEHH---FSLFK 57
           R IL S+ LL+L +V  +      +   IR V     + E+S   +L    H   F+ F 
Sbjct: 5   RTILPSVALLILIAVSTAESIGFYESNPIRMVFDRLLEVEESVVQILGQTRHVLSFARFT 64

Query: 58  SKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLN 117
            ++ K Y   EE   RF +FK NL   +       +   GV +F+D+T  EF+R  LG  
Sbjct: 65  HRYGKRYENAEEMKLRFSIFKENLDLIRSTNKKGLSYKLGVNQFTDMTWQEFQRTKLGAA 124

Query: 118 RRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLS 177
           +     A  +    L    LP   DWR+ G V+ VKDQG CGSCW+FS TGALE A+  +
Sbjct: 125 QNC--SATLKGTHKLTGEALPETKDWREDGIVSPVKDQGGCGSCWTFSTTGALEAAYHQA 182

Query: 178 TGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGT 237
            G+ +SLSEQQLVDC    +       + GCNGGL + AFEYI   GG++ E+ YPYTG 
Sbjct: 183 FGKGISLSEQQLVDCAGAFN-------NYGCNGGLPSQAFEYIKSNGGLDTEEAYPYTGE 235

Query: 238 DGGSCKFDKSKIAAAV---SNFSVISSDEDQMAANLVKHGPLAVGINAVW-MQTYIGGVS 293
           D G+CK+    +   V    N ++ + DE + A  L++  P+++    +   + Y  GV 
Sbjct: 236 D-GTCKYSAENVGVQVLDSVNITLGAEDELKHAVGLLR--PVSIAFEVIHSFRLYKSGVY 292

Query: 294 CPYICGKY---LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRN 350
               CG+    ++H VL VGYG            PYW+IKNSWG +WG+ GY+K+ MG+N
Sbjct: 293 SDSHCGQTPMDVNHAVLAVGYGIEDGV-------PYWLIKNSWGADWGDKGYFKMEMGKN 345

Query: 351 VCGVDSMVS 359
           +CG+ +  S
Sbjct: 346 MCGIATCAS 354


>gi|320164780|gb|EFW41679.1| cathepsin L2 [Capsaspora owczarzaki ATCC 30864]
          Length = 334

 Score =  217 bits (552), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 136/330 (41%), Positives = 178/330 (53%), Gaps = 42/330 (12%)

Query: 47  LNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP---TAVH----GVT 99
           LN E  F  +K  F K+Y+   E   R  V++AN      + L+D      +H    G+ 
Sbjct: 26  LNME--FEAWKRTFGKSYSDAVEEINRRAVWEAN------KMLVDAHNGAGIHSYTLGMN 77

Query: 100 KFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTND---LPTDFDWRDHGAVTGVKDQG 156
            F+DLT  EF+R +LG    L  P     +  +PT +   LP   DWR  G VT VKDQG
Sbjct: 78  IFADLTHEEFKRFYLGTKVDLNRPRSNFSSTFIPTANVGALPDSVDWRTAGIVTPVKDQG 137

Query: 157 ACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSA 216
            CGSCWSFS TG++EG H   TG+LVSLSEQ LVDC            + GCNGGLM+ A
Sbjct: 138 QCGSCWSFSTTGSVEGQHARKTGQLVSLSEQNLVDCSK-------AQGNQGCNGGLMDDA 190

Query: 217 FEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKH-GP 275
           F+YI+   G++ E  YPYT  D G+CKF+ + + A +S+F  I+   +    N V   GP
Sbjct: 191 FQYIITNKGIDTEASYPYTAKD-GTCKFNAANVGATLSSFQDITRGSESDLQNAVATVGP 249

Query: 276 LAVGINAVW--MQTYIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNS 332
           ++V I+A     Q Y  GV     C    LDHGVL  GYG+S          PYW++KNS
Sbjct: 250 VSVAIDASKNSFQLYTSGVYNEKKCSSTSLDHGVLAAGYGTS-------NGTPYWLVKNS 302

Query: 333 WGENWGENGYYKICMGRNV---CGVDSMVS 359
           WG +WG+ GY  I M RN    CG+ +  S
Sbjct: 303 WGSSWGQAGY--IWMSRNANNQCGIATSAS 330


>gi|297791625|ref|XP_002863697.1| hypothetical protein ARALYDRAFT_917391 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309532|gb|EFH39956.1| hypothetical protein ARALYDRAFT_917391 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 463

 Score =  216 bits (551), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 135/362 (37%), Positives = 189/362 (52%), Gaps = 37/362 (10%)

Query: 1   MERLILSSLLLLL----LSSVLASAVAVNDDDAMIRQVVP-SDGEQSEDHLLNAEHHFSL 55
           M  L LS ++LLL    +S  +  ++   D++  I  V   SD E         E  +  
Sbjct: 1   MGFLKLSPMILLLAMIGVSYAIDMSIISYDENHHISTVSSRSDAE--------VERIYEA 52

Query: 56  FKSKFSKTYATQE----EHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRR 111
           +  +  K    Q     E D RF +FK NLR        + +   G+T+F+DLT  E+R 
Sbjct: 53  WMVEHGKKKMNQNGLGAEKDQRFEIFKDNLRYIDEHNTKNLSYKLGLTRFADLTNDEYRS 112

Query: 112 QFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALE 171
            +LG     R+   + +      + LP   DWR  GAV  VKDQG+CGSCW+FS  GA+E
Sbjct: 113 MYLGAKPVKRVLKTSDRYEARVGDALPDSVDWRKEGAVADVKDQGSCGSCWAFSTIGAVE 172

Query: 172 GAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKD 231
           G + + TG+L+SLSEQ+LVDCD         S + GCNGGLM+ AFE+I+K GG++ E D
Sbjct: 173 GINKIVTGDLISLSEQELVDCDT--------SYNQGCNGGLMDYAFEFIIKNGGIDTEAD 224

Query: 232 YPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTYI 289
           YPY   DG   +  K+     + ++  +  + +      + H P++V I A     Q Y 
Sbjct: 225 YPYKAADGRCDQNRKNAKVVTIDSYEDVPENSEASLKKALAHQPISVAIEAGGRAFQLYS 284

Query: 290 GGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR 349
            GV    ICG  LDHGV+ VGYG+          K YWI++NSWG  WGE+GY K  M R
Sbjct: 285 SGVF-DGICGTELDHGVVAVGYGTE-------NGKDYWIVRNSWGNRWGESGYIK--MAR 334

Query: 350 NV 351
           N+
Sbjct: 335 NI 336


>gi|18418684|ref|NP_567983.1| Xylem cysteine proteinase 1 [Arabidopsis thaliana]
 gi|71153408|sp|O65493.1|XCP1_ARATH RecName: Full=Xylem cysteine proteinase 1; Short=AtXCP1; Flags:
           Precursor
 gi|6708181|gb|AAF25831.1|AF191027_1 papain-type cysteine endopeptidase XCP1 [Arabidopsis thaliana]
 gi|3080415|emb|CAA18734.1| cysteine proteinase-like protein [Arabidopsis thaliana]
 gi|7270487|emb|CAB80252.1| cysteine proteinase-like protein [Arabidopsis thaliana]
 gi|26449881|dbj|BAC42063.1| putative cysteine proteinase [Arabidopsis thaliana]
 gi|28827736|gb|AAO50712.1| unknown protein [Arabidopsis thaliana]
 gi|332661101|gb|AEE86501.1| Xylem cysteine proteinase 1 [Arabidopsis thaliana]
          Length = 355

 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 134/332 (40%), Positives = 184/332 (55%), Gaps = 37/332 (11%)

Query: 44  DHLLNAEHHFSLFKS---KFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTK 100
           +HL N +    LF+S   + SK Y + EE  +RF VF+ NL    +R     +   G+ +
Sbjct: 39  EHLTNTDKLLELFESWMSEHSKAYKSVEEKVHRFEVFRENLMHIDQRNNEINSYWLGLNE 98

Query: 101 FSDLTPSEFRRQFLGLNR----RLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQG 156
           F+DLT  EF+ ++LGL +    R R P+   +   +   DLP   DWR  GAV  VKDQG
Sbjct: 99  FADLTHEEFKGRYLGLAKPQFSRKRQPSANFRYRDI--TDLPKSVDWRKKGAVAPVKDQG 156

Query: 157 ACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSA 216
            CGSCW+FS   A+EG + ++TG L SLSEQ+L+DCD         + +SGCNGGLM+ A
Sbjct: 157 QCGSCWAFSTVAAVEGINQITTGNLSSLSEQELIDCDT--------TFNSGCNGGLMDYA 208

Query: 217 FEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIA-AAVSNFSVISSDEDQMAANLVKHGP 275
           F+YI+  GG+ +E DYPY   + G C+  K  +    +S +  +  ++D+     + H P
Sbjct: 209 FQYIISTGGLHKEDDYPYL-MEEGICQEQKEDVERVTISGYEDVPENDDESLVKALAHQP 267

Query: 276 LAVGINAVW--MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSW 333
           ++V I A     Q Y GGV     CG  LDHGV  VGYGSS       K   Y I+KNSW
Sbjct: 268 VSVAIEASGRDFQFYKGGVFNGK-CGTDLDHGVAAVGYGSS-------KGSDYVIVKNSW 319

Query: 334 GENWGENGYYKICMGRN------VCGVDSMVS 359
           G  WGE G+  I M RN      +CG++ M S
Sbjct: 320 GPRWGEKGF--IRMKRNTGKPEGLCGINKMAS 349


>gi|340371596|ref|XP_003384331.1| PREDICTED: digestive cysteine proteinase 2-like [Amphimedon
           queenslandica]
          Length = 327

 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 121/313 (38%), Positives = 176/313 (56%), Gaps = 22/313 (7%)

Query: 47  LNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTP 106
           +N    + L+K K+ KTY +  E + R +++  N         +D +    V +F+DLT 
Sbjct: 23  VNDAEEWRLWKGKYGKTYRSIYEDNMRQKIWLQNRDYVNEHNSMDSSFQLEVNEFADLTA 82

Query: 107 SEFRRQFLGLNR-RLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFS 165
            EF   + G  + R R   +           +P   DWR  G VT VK+Q  CGSCW+FS
Sbjct: 83  EEFSSIYNGYGKGRNRENHENTTIYRYTGGAIPDSVDWRTKGLVTPVKNQKQCGSCWAFS 142

Query: 166 ATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGG 225
            TG+LEGAH   TG+LVSLSEQ LVDCD +         D GC GGLM +AF+YI +  G
Sbjct: 143 TTGSLEGAHAKKTGKLVSLSEQNLVDCDKK---------DHGCQGGLMTTAFKYIEENKG 193

Query: 226 VEREKDYPYTGTDGGSCKFDKSKIAAAVS-NFSVISSDEDQMAANLVKHGPLAVGINAVW 284
           ++ E+ YPY   + G C+F K  I A V  + S++++D + +   + + GP++V ++A  
Sbjct: 194 IDTEESYPYKAKN-GRCEFKKDDIGATVERHVSILTTDCEALKKAVAEIGPISVAMDASH 252

Query: 285 --MQTYIGGVSCPYIC-GKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENG 341
              Q Y  G+  P IC  + LDHGVL+VGYG       +   + YW++KNSWG+NWG  G
Sbjct: 253 SSFQLYKSGIYDPKICSSRKLDHGVLVVGYG-------KEDGEEYWLVKNSWGKNWGMEG 305

Query: 342 YYKICMGRNVCGV 354
           Y+KI   +N+CG+
Sbjct: 306 YFKIASKKNLCGI 318


>gi|224096714|ref|XP_002310708.1| predicted protein [Populus trichocarpa]
 gi|222853611|gb|EEE91158.1| predicted protein [Populus trichocarpa]
          Length = 356

 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 136/335 (40%), Positives = 184/335 (54%), Gaps = 38/335 (11%)

Query: 41  QSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTK 100
           +S+D +++    +  +  K  K Y    E   RF +FK NLR        + T   G+TK
Sbjct: 19  RSDDEVMSI---YKWWLQKHGKAYNRLGEKAKRFEIFKNNLRFIDEHNSQNRTYKVGLTK 75

Query: 101 FSDLTPSEFRRQFLGL----NRRLRLPADAQKAPILPTND-LPTDFDWRDHGAVTGVKDQ 155
           F+DLT  E+R  FLG      RRL    +  +       D LP   DWR  GAV  +KDQ
Sbjct: 76  FADLTNQEYRAMFLGTRSDPKRRLMKSKNPSERYAYKAGDKLPESVDWRGKGAVNPIKDQ 135

Query: 156 GACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNS 215
           G+CGSCW+FS   A+EG + + TGEL+SLSEQ+LVDCD           ++GCNGGLM+ 
Sbjct: 136 GSCGSCWAFSTVAAVEGINQIVTGELISLSEQELVDCDR--------FYNAGCNGGLMDY 187

Query: 216 AFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKI-AAAVSNFSVISSDEDQMAANLVKHG 274
           AF++I+  GG++ EKDYPY G D  +C  DK K  A ++  F  +   +++     V H 
Sbjct: 188 AFQFIINNGGLDTEKDYPYLGND-DTCDRDKMKTKAVSIDGFEDVLPFDEKALQKAVAHQ 246

Query: 275 PLAVGINAVWM--QTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNS 332
           P++V I A  M  Q Y  GV     CG  LDHGV++VGYG+        K   YW+++NS
Sbjct: 247 PVSVAIEASGMALQFYQSGVFTGE-CGTALDHGVVVVGYGTE-------KGLDYWLVRNS 298

Query: 333 WGENWGENGYYKICMGRNV-------CGVDSMVSS 360
           WG  WGE+GY K  M RNV       CG+ +M SS
Sbjct: 299 WGTEWGEHGYIK--MQRNVRDTYTGRCGI-AMESS 330


>gi|378943060|gb|AFC76271.1| cathepsin L-like protease [Leishmania major]
          Length = 348

 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 129/312 (41%), Positives = 174/312 (55%), Gaps = 32/312 (10%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           F  FK  + + Y T  E   R   F+ NL   +  Q  +P A  G+TKF DL+ +EF  +
Sbjct: 38  FEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 113 FLGLNRRLRLPADAQKA------PILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSA 166
           +L  N      A  Q A           + +P   DWR+ GAVT VK+QGACGSCW+FSA
Sbjct: 98  YL--NGAAYFAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSCWAFSA 155

Query: 167 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK--AG 224
            G +E    ++  +LV LSEQQLV CDH          D+GC GGLM  AFE++L+   G
Sbjct: 156 VGNIESQWAVAGHKLVRLSEQQLVSCDH---------VDNGCGGGLMLQAFEWVLRNMNG 206

Query: 225 GVEREKDYPYTGTDGG--SCKFDKSKIA--AAVSNFSVISSDEDQMAANLVKHGPLAVGI 280
            V  EK YPYT  +G    C  + S++A  A +  +  + S E  MAA L K+GP+++ +
Sbjct: 207 TVFTEKSYPYTSGNGDVPECS-NSSELAPGARIDGYVSMESSERVMAAWLAKNGPISIAV 265

Query: 281 NAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGEN 340
           +A    +Y  GV    I G+ L+HGVL+VGY  +G       E PYW+IKNSWGE+WGE 
Sbjct: 266 DASSFMSYHSGVLTSCI-GEQLNHGVLLVGYNMTG-------EVPYWVIKNSWGEDWGEK 317

Query: 341 GYYKICMGRNVC 352
           GY ++ MG N C
Sbjct: 318 GYVRVTMGVNAC 329


>gi|66814630|ref|XP_641494.1| cysteine protease [Dictyostelium discoideum AX4]
 gi|118121|sp|P04989.1|CYSP2_DICDI RecName: Full=Cysteine proteinase 2; AltName: Full=Prestalk
           cathepsin; Flags: Precursor
 gi|167860|gb|AAA33240.1| pst-cathepsin [Dictyostelium discoideum]
 gi|1834417|emb|CAA27050.1| cysteine proteinase 2 [Dictyostelium discoideum]
 gi|60469522|gb|EAL67513.1| cysteine protease [Dictyostelium discoideum AX4]
 gi|225484|prf||1304284A cathepsin,prestalk
          Length = 376

 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 131/345 (37%), Positives = 178/345 (51%), Gaps = 46/345 (13%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKR-RQLLDPTAVHGVTKFSDLTPSEFRR 111
           F+ +  KF++ Y++ E  + R+ +FK+N+          D   V G+  F+D+T  E+R+
Sbjct: 36  FTEWTLKFNRQYSSSEFSN-RYSIFKSNMDYVDNWNSKGDSQTVLGLNNFADITNEEYRK 94

Query: 112 QFLGLNRRLRLPADAQKAPILPTNDL---PTDFDWRDHGAVTGVKDQGACGSCWSFSATG 168
            +LG               +L   DL   P   DWR   AVT +KDQG CGSCWSFS TG
Sbjct: 95  TYLGTRVNAHSYNGYDGREVLNVEDLQTNPKSIDWRTKNAVTPIKDQGQCGSCWSFSTTG 154

Query: 169 ALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVER 228
           + EGAH L T +LVSLSEQ LVDC     PEE    + GC+GGLMN+AF+YI+K  G++ 
Sbjct: 155 STEGAHALKTKKLVSLSEQNLVDC---SGPEE----NFGCDGGLMNNAFDYIIKNKGIDT 207

Query: 229 EKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQ 286
           E  YPYT   G +C F+KS I A +  +  I++  +    N  +HGP++V I+A     Q
Sbjct: 208 ESSYPYTAETGSTCLFNKSDIGATIKGYVNITAGSEISLENGAQHGPVSVAIDASHNSFQ 267

Query: 287 TYIGGVSCPYICGKY-LDHGVLIVGYGSSG------------------------------ 315
            Y  G+     C    LDHGVL+VGYG  G                              
Sbjct: 268 LYTSGIYYEPKCSPTELDHGVLVVGYGVQGKDDEGPVLNRKQTIVIHKNEDNKVESSDDS 327

Query: 316 FAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVS 359
              +R K   YWI+KNSWG +WG  GY  +   R N CG+ S+ S
Sbjct: 328 SDSVRPKANNYWIVKNSWGTSWGIKGYILMSKDRKNNCGIASVSS 372


>gi|297830594|ref|XP_002883179.1| hypothetical protein ARALYDRAFT_318695 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297329019|gb|EFH59438.1| hypothetical protein ARALYDRAFT_318695 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 308

 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 129/309 (41%), Positives = 174/309 (56%), Gaps = 39/309 (12%)

Query: 62  KTYATQEEHDYRFRVFKANLRRA-KRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRL 120
           K Y    E + R ++FK NL+   +   L + T   G+T+F+DLT  E  + F+  +R L
Sbjct: 11  KNYNGLGEKERRCKIFKENLKFIDEHNSLPNQTFEVGLTRFADLTNDE-PKDFMKADRYL 69

Query: 121 RLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGE 180
               D           LP + DWR  GAV  VKDQG CGSCW+FSA GA+EG + + TGE
Sbjct: 70  YKEGDI----------LPDEIDWRAKGAVVPVKDQGNCGSCWAFSAVGAVEGINQIKTGE 119

Query: 181 LVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGG 240
           L+SLS+Q+L+DCD        G  ++GC GG+MN AFE+I+  GG+E ++DYPYT TD G
Sbjct: 120 LISLSDQELIDCDR-------GFVNAGCEGGVMNYAFEFIINNGGIESDQDYPYTATDLG 172

Query: 241 SCKFDKSKIAAAVS--NFSVISSDEDQMAANLVKHGPLAVGINAV--WMQTYIGGVSCPY 296
            C  DK      V    +  ++ ++++     V H P+ V I A     + Y  GV    
Sbjct: 173 VCNADKKNNTRVVKIDGYEYVAQNDEKSLKKAVAHQPVGVAIEASSQAFKLYKSGVFTG- 231

Query: 297 ICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNV----- 351
            CG YLDHGV++VGYG+S         + YWII+NSWG NWGENGY K  + RN+     
Sbjct: 232 TCGIYLDHGVVVVGYGTS-------SGEDYWIIRNSWGLNWGENGYVK--LQRNIDDSFG 282

Query: 352 -CGVDSMVS 359
            CGV  M S
Sbjct: 283 KCGVAMMPS 291


>gi|394331805|gb|AFN27125.1| cysteine protease [Leishmania major]
          Length = 348

 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 128/312 (41%), Positives = 173/312 (55%), Gaps = 32/312 (10%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           F  FK  + + Y T  E   R   F+ NL   +  Q  +P A  G+TKF DL+ +EF  +
Sbjct: 38  FEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 113 FLGLNRRLRLPADAQKA------PILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSA 166
           +L  N      A  Q A           + +P   DWR+ GAVT VK+QGACGSCW+FSA
Sbjct: 98  YL--NGAAYFAAAKQHAGQHYRKACADLSAVPDAVDWREKGAVTPVKNQGACGSCWAFSA 155

Query: 167 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK--AG 224
            G +E    ++  +LV LSEQQLV CDH          D+GC GGLM  AFE++L+   G
Sbjct: 156 VGNIESQWAVAGHKLVRLSEQQLVSCDH---------VDNGCGGGLMLQAFEWVLRNMNG 206

Query: 225 GVEREKDYPYTGTDGG--SCKFDKSKIA--AAVSNFSVISSDEDQMAANLVKHGPLAVGI 280
            V  EK YPY   +G    C  + S++A  A +  +  + S E  MAA L K+GP+++ +
Sbjct: 207 TVSTEKSYPYVSGNGDVPECS-NSSELAPGARIDGYVSMESSERVMAAWLAKNGPISIAV 265

Query: 281 NAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGEN 340
           +A    +Y  GV    I G+ L+HGVL+VGY  +G       E PYW+IKNSWGE+WGE 
Sbjct: 266 DASSFMSYHSGVLTSCI-GEQLNHGVLLVGYNMTG-------EVPYWVIKNSWGEDWGEK 317

Query: 341 GYYKICMGRNVC 352
           GY ++ MG N C
Sbjct: 318 GYVRVTMGVNAC 329


>gi|50355619|dbj|BAD29958.1| cysteine protease [Daucus carota]
          Length = 496

 Score =  216 bits (550), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 119/314 (37%), Positives = 181/314 (57%), Gaps = 29/314 (9%)

Query: 54  SLFKS---KFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH-GVTKFSDLTPSEF 109
           +LF+S      K+Y    E + RF++FK NLR    + L++      G+ KF+DLT  E+
Sbjct: 43  TLFESWLVTHGKSYNALGEEEKRFQIFKNNLRYIDEQNLVEDRGFKLGLNKFADLTNEEY 102

Query: 110 RRQFLGL---NRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSA 166
           R ++ G+   + R ++ A + +   L    LP   DWR+ GAV  VKDQG+CGSCW+FS 
Sbjct: 103 RSKYTGIKSKDLRKKVSAKSGRYATLSGESLPESVDWRESGAVATVKDQGSCGSCWAFST 162

Query: 167 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGV 226
             A+EG + ++TG+L++LSEQ+LVDCD         S + GCNGGLM+ AFE+I+  GG+
Sbjct: 163 ISAVEGINQIATGKLITLSEQELVDCDR--------SYNEGCNGGLMDYAFEFIINNGGI 214

Query: 227 EREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW-- 284
           + + DYPYTG DG   ++ K+     + ++  + + ++        + P++V I A    
Sbjct: 215 DTDVDYPYTGRDGKCDQYRKNAKVVTIDSYEDVPAYDELALKKAAANQPISVAIEASGRD 274

Query: 285 MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYK 344
            Q Y  G+     CG  LDHGV++VGYG+          K YWI++NSWG +WGENGY +
Sbjct: 275 FQFYDSGIFTG-KCGIALDHGVVVVGYGTE-------NGKDYWIVRNSWGADWGENGYLR 326

Query: 345 ICMG----RNVCGV 354
           +  G      +CG+
Sbjct: 327 MERGISSKTGICGI 340


>gi|391328505|ref|XP_003738729.1| PREDICTED: cathepsin L-like [Metaseiulus occidentalis]
          Length = 323

 Score =  216 bits (550), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 136/327 (41%), Positives = 183/327 (55%), Gaps = 38/327 (11%)

Query: 49  AEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAK----RRQLLDPTAVHGVTKFSDL 104
           A  ++ L+K    K+Y   EEH +R ++F  ++ +      R  L   T   G+ KF+D+
Sbjct: 15  ASANWDLYKKVHGKSYGHDEEH-FRRQLFYKSVAKINAHNLRHDLGLTTYRMGLNKFTDM 73

Query: 105 TPSEFRRQFLGL----NRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGS 160
           T  EFR  F GL     +  R     QK   L    LPT  DWR+ G VT VK+QG CGS
Sbjct: 74  TSEEFR-NFKGLKFDATKTKRNGTRFQKE--LLGEALPTQVDWREKGYVTPVKNQGQCGS 130

Query: 161 CWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYI 220
           CW+FS TG+LEG HF +TG+LVSLSEQ LVDC            ++GCNGGLM++ F YI
Sbjct: 131 CWAFSTTGSLEGQHFKATGKLVSLSEQNLVDCSRV-------EGNNGCNGGLMDNGFTYI 183

Query: 221 LKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVG 279
            + GG++ E+ YPYTG D G C F+++ + A V  F  V   DE  + A +   GP++V 
Sbjct: 184 QQNGGIDTEESYPYTGKD-GDCAFNENSVGARVKGFVDVPQRDEAALQAAVASVGPVSVA 242

Query: 280 INAV--WMQTYIGGV----SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSW 333
           I+A     Q Y  GV    SC +     LDHGVL+VGYG+            YW++KNSW
Sbjct: 243 IDASNDSFQYYKEGVYDEPSCSF---SQLDHGVLVVGYGTENGV-------DYWLVKNSW 292

Query: 334 GENWGENGYYKICMGR-NVCGVDSMVS 359
           G  WG++GY K+   + N CG+ SM S
Sbjct: 293 GPTWGQDGYIKMMRNKENQCGIASMAS 319


>gi|449500145|ref|XP_004161017.1| PREDICTED: xylem cysteine proteinase 1-like [Cucumis sativus]
          Length = 349

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 131/359 (36%), Positives = 191/359 (53%), Gaps = 37/359 (10%)

Query: 12  LLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKS---KFSKTYATQE 68
           L+LS+ L    A+  D +++          S +HL + +    LF+S   K SKTY + E
Sbjct: 11  LILSATLFITYAIAHDFSIVGY--------SPEHLASMDKTIELFESWMSKHSKTYRSIE 62

Query: 69  EHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQK 128
           E  +RF +F  NL+          +   G+ +F+DL+  EF+ ++LGL         ++ 
Sbjct: 63  EKLHRFEIFLDNLKHIDETNKKVSSYWLGLNEFADLSHEEFKSKYLGLRVEFPRKRSSRG 122

Query: 129 APILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQ 188
                  DLP   DWR  GAVT VK+QG+CGSCW+FS   A+EG + + TG L SLSEQ+
Sbjct: 123 FSYGDVEDLPESVDWRTKGAVTPVKNQGSCGSCWAFSTVAAVEGINQIVTGNLTSLSEQE 182

Query: 189 LVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSK 248
           L+DCD         S ++GC GGLM+ AF+YI+   G+ +E+DYPY   +G   +  +  
Sbjct: 183 LIDCDR--------SFNNGCYGGLMDYAFQYIMSNSGLRKEEDYPYLMEEGRCIREKEQF 234

Query: 249 IAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKYLDHGV 306
               +S +  + ++++Q     + H P++V I A     Q Y GG+     CG  +DHGV
Sbjct: 235 EVVTISGYEDVPANDEQSLLKALSHQPVSVAIEASSRNFQFYKGGIFTGR-CGTQMDHGV 293

Query: 307 LIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRN------VCGVDSMVS 359
             VGYGSS       +   Y I+KNSWG  WGENGY  I M RN      +CG++ M S
Sbjct: 294 TAVGYGSS-------EGTDYIIVKNSWGPKWGENGY--IRMKRNTGKPEGLCGINQMAS 343


>gi|5231178|gb|AAD41105.1|AF157961_1 cysteine proteinase [Hypera postica]
          Length = 324

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 119/315 (37%), Positives = 176/315 (55%), Gaps = 39/315 (12%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLL----DPTAVHGVTKFSDLTPSE 108
           F  FK +  KTY  Q E   RF +F  N+R  +    L      +   G+ KF+D++  E
Sbjct: 26  FQAFKLEHGKTYLNQAEESKRFNIFTDNVRAIEAHNALYEQGKVSYKKGINKFTDMSQEE 85

Query: 109 FRRQFLGLNRRLRLPADAQKAPILPTN-------DLPTDFDWRDHGAVTGVKDQGACGSC 161
           F+           L   A + P L T        ++P+  DWR  G VTGVKDQG CGSC
Sbjct: 86  FKTM---------LTLSASRKPTLETTSYVKTGVEIPSSVDWRKEGRVTGVKDQGDCGSC 136

Query: 162 WSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYIL 221
           W+FS TG+ EGA+   +G+LVSLSEQQL+DC   C         +GC+GG ++  F+Y++
Sbjct: 137 WAFSITGSTEGAYARKSGKLVSLSEQQLIDC---CT-----DTSAGCDGGSLDDNFKYVM 188

Query: 222 KAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVI-SSDEDQMAANLVKHGPLAVGI 280
           K  G++ E+ Y Y G D G+CK++ + +   VS ++ I + DED +   +   GP++VG+
Sbjct: 189 K-DGLQSEESYTYKGED-GACKYNVASVVTKVSKYTSIPAEDEDALLEAVATVGPVSVGM 246

Query: 281 NAVWMQTYIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGE 339
           +A ++ +Y  G+     C    L+H +L VGYG+          K YWIIKNSWG +WGE
Sbjct: 247 DASYLSSYDSGIYEDQDCSPAGLNHAILAVGYGTE-------NGKDYWIIKNSWGASWGE 299

Query: 340 NGYYKICMGRNVCGV 354
            GY+++  G+N CG+
Sbjct: 300 QGYFRLARGKNQCGI 314


>gi|285002340|ref|YP_003422404.1| cathepsin [Pseudaletia unipuncta granulovirus]
 gi|197343600|gb|ACH69415.1| cathepsin [Pseudaletia unipuncta granulovirus]
          Length = 338

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 119/328 (36%), Positives = 176/328 (53%), Gaps = 28/328 (8%)

Query: 46  LLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLT 105
           L N+E  F  F +K+ K YA   E   RF VFKANL     R   + +A  G+  +SDL+
Sbjct: 30  LSNSEVLFDEFVTKYGKVYANDAERKSRFDVFKANLAIINERNAQEESATFGINFYSDLS 89

Query: 106 PSEFRRQFLGLNRRLRLPADAQKAPILPTND---------LPTDFDWRDHGAVTGVKDQG 156
            +E  R+  G   +  L  D +K     T           LP  F+WRD  AVT VK Q 
Sbjct: 90  SNELLRKQTGF--KTALHNDNEKKSKYCTRRVITGPSTRLLPEAFNWRDSDAVTSVKQQR 147

Query: 157 ACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSA 216
            CGSCW+FSA   +E  +++   + V LSEQQ+VDCD           ++GCNGGLM+ A
Sbjct: 148 DCGSCWAFSAVANIESQYYIKNKQYVDLSEQQIVDCD---------PINNGCNGGLMSWA 198

Query: 217 FEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPL 276
            EY++++GGV+ E+DY Y G + G CK + + +       S    +E+++   LV +GP+
Sbjct: 199 MEYVMRSGGVQLEEDYQYVGNE-GVCKNNSANVVQISGCVSYDLRNEERLRELLVSNGPI 257

Query: 277 AVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGEN 336
           +V I+ + +  Y  G++        L+H VL+VGYG            PYW+ KNSWG +
Sbjct: 258 SVAIDVMDVTNYQSGIAKHCSVAHGLNHAVLLVGYGVQ-------NNTPYWVFKNSWGSD 310

Query: 337 WGENGYYKICMGRNVCGVDSMVSSVAAI 364
           WGENGY+++    N CG+ +  ++ A +
Sbjct: 311 WGENGYFRVLRDVNSCGMLNQYAATAIL 338


>gi|6649593|gb|AAF21470.1|U85983_1 cysteine proteinase [Clonorchis sinensis]
          Length = 259

 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 120/272 (44%), Positives = 157/272 (57%), Gaps = 25/272 (9%)

Query: 93  TAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTD---FDWRDHGAV 149
           TA +GVT+FSDLT  EF+ ++L    R+R         + P  D+  D   FDWR+HGAV
Sbjct: 5   TAHYGVTQFSDLTSEEFKTRYL----RMRFDGPIVSEDLTPEEDVTMDNEKFDWREHGAV 60

Query: 150 TGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCN 209
             V DQG CGSCW+FS  G + G  F  TG L++LSEQQLVDCD+          D GC+
Sbjct: 61  GPVLDQGKCGSCWAFSVIGNVVGQWFRKTGHLLALSEQQLVDCDY---------LDDGCD 111

Query: 210 GGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAAN 269
           GG     +  I K GG+E   DYPYTG  GG C  DKSK  A V+  +++   E   A  
Sbjct: 112 GGYPPQTYTAIQKMGGLELASDYPYTGV-GGICHMDKSKFVAYVNGSTILPLSEKVQAQK 170

Query: 270 LVKHGPLAVGINAVWMQTYIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWI 328
           L   GPL+  +NA  +Q Y GG+  P  C    ++H VL VGYG           KPYWI
Sbjct: 171 LRAIGPLSSALNADTLQLYKGGIMRPKWCDPAGVNHAVLTVGYGVQ-------NGKPYWI 223

Query: 329 IKNSWGENWGENGYYKICMGRNVCGVDSMVSS 360
           +KNSWGE++GE GY++I  G   CG++S+V++
Sbjct: 224 VKNSWGEDFGEEGYFRIYRGDGTCGINSIVTT 255


>gi|157864843|ref|XP_001681130.1| cathepsin L-like protease [Leishmania major strain Friedlin]
 gi|68124424|emb|CAJ02280.1| cathepsin L-like protease [Leishmania major strain Friedlin]
          Length = 348

 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 129/312 (41%), Positives = 174/312 (55%), Gaps = 32/312 (10%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           F  FK  + + Y T  E   R   F+ NL   +  Q  +P A  G+TKF DL+ +EF  +
Sbjct: 38  FEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 113 FLGLNRRLRLPADAQKA------PILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSA 166
           +L  N      A  Q A           + +P   DWR+ GAVT VK+QGACGSCW+FSA
Sbjct: 98  YL--NGAAYFAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSCWAFSA 155

Query: 167 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK--AG 224
            G +E    ++  +LV LSEQQLV CDH          D+GC GGLM  AFE++L+   G
Sbjct: 156 VGNIESQWAVAGHKLVRLSEQQLVSCDH---------VDNGCGGGLMLQAFEWVLRNMNG 206

Query: 225 GVEREKDYPYTGTDG--GSCKFDKSKIA--AAVSNFSVISSDEDQMAANLVKHGPLAVGI 280
            V  EK YPYT T G    C  + S++A  A +  +  + S E  MAA L K+GP+++ +
Sbjct: 207 TVFTEKSYPYTSTFGYVPECS-NSSELAPGARIDGYVSMESSERVMAAWLAKNGPISIAV 265

Query: 281 NAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGEN 340
           +A    +Y  GV    I G+ L+HGVL+VGY  +G       E PYW+IKNSWG++WGE 
Sbjct: 266 DASSFMSYHSGVLTSCI-GEQLNHGVLLVGYNMTG-------EVPYWVIKNSWGKDWGEK 317

Query: 341 GYYKICMGRNVC 352
           GY ++ MG N C
Sbjct: 318 GYVRVTMGVNAC 329


>gi|18422289|ref|NP_568620.1| Granulin repeat cysteine protease family protein [Arabidopsis
           thaliana]
 gi|9757832|dbj|BAB08269.1| cysteine protease component of protease-inhibitor complex
           [Arabidopsis thaliana]
 gi|17065064|gb|AAL32686.1| cysteine protease component of protease-inhibitor complex
           [Arabidopsis thaliana]
 gi|21387153|gb|AAM47980.1| cysteine protease component of protease-inhibitor complex
           [Arabidopsis thaliana]
 gi|332007522|gb|AED94905.1| Granulin repeat cysteine protease family protein [Arabidopsis
           thaliana]
          Length = 463

 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 131/362 (36%), Positives = 189/362 (52%), Gaps = 37/362 (10%)

Query: 1   MERLILSSLLLLLLS-----SVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSL 55
           M  L LS ++LLL       ++  S ++ +++  +  +   SD E         E  +  
Sbjct: 1   MGFLKLSPMILLLAMIGVSYAMDMSIISYDENHHITTETSRSDSE--------VERIYEA 52

Query: 56  FKSKFSKTYATQE----EHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRR 111
           +  +  K    Q     E D RF +FK NLR        + +   G+T+F+DLT  E+R 
Sbjct: 53  WMVEHGKKKMNQNGLGAEKDQRFEIFKDNLRFIDEHNTKNLSYKLGLTRFADLTNEEYRS 112

Query: 112 QFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALE 171
            +LG     R+   + +      + LP   DWR  GAV  VKDQG+CGSCW+FS  GA+E
Sbjct: 113 MYLGAKPTKRVLKTSDRYQARVGDALPDSVDWRKEGAVADVKDQGSCGSCWAFSTIGAVE 172

Query: 172 GAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKD 231
           G + + TG+L+SLSEQ+LVDCD         S + GCNGGLM+ AFE+I+K GG++ E D
Sbjct: 173 GINKIVTGDLISLSEQELVDCDT--------SYNQGCNGGLMDYAFEFIIKNGGIDTEAD 224

Query: 232 YPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTYI 289
           YPY   DG   +  K+     + ++  +  + +      + H P++V I A     Q Y 
Sbjct: 225 YPYKAADGRCDQNRKNAKVVTIDSYEDVPENSEASLKKALAHQPISVAIEAGGRAFQLYS 284

Query: 290 GGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR 349
            GV    +CG  LDHGV+ VGYG+          K YWI++NSWG  WGE+GY K  M R
Sbjct: 285 SGVF-DGLCGTELDHGVVAVGYGTE-------NGKDYWIVRNSWGNRWGESGYIK--MAR 334

Query: 350 NV 351
           N+
Sbjct: 335 NI 336


>gi|401419663|ref|XP_003874321.1| cysteine peptidase A (CBA) [Leishmania mexicana MHOM/GT/2001/U1103]
 gi|1706259|sp|P35591.2|CYSP1_LEIPI RecName: Full=Cysteine proteinase 1; AltName: Full=Amastigote
           cysteine proteinase A-1; Flags: Precursor
 gi|1220383|gb|AAA91859.1| cysteine proteinase [Leishmania pifanoi]
 gi|322490556|emb|CBZ25817.1| cysteine peptidase A (CBA) [Leishmania mexicana MHOM/GT/2001/U1103]
          Length = 354

 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 138/367 (37%), Positives = 198/367 (53%), Gaps = 39/367 (10%)

Query: 12  LLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHD 71
           LL + V+     V    A+I Q  P       D+ + A  H+  FK +  K +    E  
Sbjct: 7   LLFAIVVTILFVVCYGSALIAQTPPP-----VDNFV-ASAHYGSFKKRHGKAFGGDAEEG 60

Query: 72  YRFRVFKANLRRAKRRQLLDPTAVHGVT-KFSDLTPSEFRRQFLGLNRRLRLPADAQKAP 130
           +RF  FK N++ A      +P A + V+ KF+DLTP EF + +L  +   R   D  K  
Sbjct: 61  HRFNAFKQNMQTAYFLNTQNPHAHYDVSGKFADLTPQEFAKLYLNPDYYARHLKD-HKED 119

Query: 131 ILPTNDLPT---DFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQ 187
           +   +  P+     DWRD GAVT VK+QG CGSCW+FSA G +EG    S   LVSLSEQ
Sbjct: 120 VHVDDSAPSGVMSVDWRDKGAVTPVKNQGLCGSCWAFSAIGNIEGQWAASGHSLVSLSEQ 179

Query: 188 QLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA--GGVEREKDYPYTGTDGGSCK-- 243
            LV CD         + D GCNGGLM+ A  +I+++  G V  E  YPY  T GG  +  
Sbjct: 180 MLVSCD---------NIDEGCNGGLMDQAMNWIMQSHNGSVFTEASYPY--TSGGGTRPP 228

Query: 244 -FDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKY- 301
             D+ ++ A ++ F  +  DE+++A  + K GP+AV ++A   Q Y GGV    +C  + 
Sbjct: 229 CHDEGEVGAKITGFLSLPHDEERIAEWVEKRGPVAVAVDATTWQLYFGGVVS--LCLAWS 286

Query: 302 LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDS--MVS 359
           L+HGVLIVG+  +        + PYWI+KNSWG +WGE GY ++ MG N C + +  + +
Sbjct: 287 LNHGVLIVGFNKNA-------KPPYWIVKNSWGSSWGEKGYIRLAMGSNQCMLKNYPVSA 339

Query: 360 SVAAIHT 366
           +V + HT
Sbjct: 340 TVESPHT 346


>gi|410978262|ref|XP_003995514.1| PREDICTED: cathepsin L1-like [Felis catus]
          Length = 333

 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 128/315 (40%), Positives = 172/315 (54%), Gaps = 22/315 (6%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVT----KFSDLTPSE 108
           +S +K+   K Y   EE  +R  V+K N++  ++         H  T     F D+T  E
Sbjct: 29  WSQWKATHGKLYGMDEE-GWRREVWKKNMKMIRQHNWEHSQGKHSFTVAMNGFGDMTNEE 87

Query: 109 FRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATG 168
           F++   GL  +        +AP+     +P+  DWR+ G VT VKDQG CGSCW+FSATG
Sbjct: 88  FKQVMNGLQMQKHKKGKMFQAPLFAK--IPSSVDWREKGYVTPVKDQGPCGSCWAFSATG 145

Query: 169 ALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVER 228
           ALEG  F  TG+LVSLSEQ LVDC            + GCNGGLMN+AF+Y+   GG++ 
Sbjct: 146 ALEGQMFRKTGKLVSLSEQNLVDCSQ-------AEGNEGCNGGLMNNAFQYVKDNGGLDS 198

Query: 229 EKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQ 286
           E+ YPY   D  SCK+     AA  + F  I   E  +   +   GP++VGI+A     Q
Sbjct: 199 EESYPYHAQD-ESCKYKPQDSAANDTGFFDIPQQEKALMVAVATKGPISVGIDASHFTFQ 257

Query: 287 TYIGGVSC-PYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKI 345
            Y  G+   P    + LDHGVL++GYG+     I    K YWI+KNSWG NWG +GY K+
Sbjct: 258 FYHEGIYYDPDCSSEDLDHGVLVIGYGTEIGQSIN---KTYWIVKNSWGANWGIDGYIKM 314

Query: 346 CMGR-NVCGVDSMVS 359
              R N CG+ +M S
Sbjct: 315 AKDRKNHCGIATMAS 329


>gi|226508570|ref|NP_001141984.1| uncharacterized protein LOC100274134 precursor [Zea mays]
 gi|194706676|gb|ACF87422.1| unknown [Zea mays]
 gi|413920745|gb|AFW60677.1| vignain [Zea mays]
          Length = 363

 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 120/318 (37%), Positives = 176/318 (55%), Gaps = 26/318 (8%)

Query: 52  HFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTA-VHGVTKFSDLTPSEFR 110
            +  + +++ + Y    E  +RF+VFKAN     R         V G  +F+DLT  EF 
Sbjct: 58  RYKKWMAQYRRKYKDDAEKAHRFQVFKANAEFIDRSNAGGKKKYVLGTNQFADLTSKEFA 117

Query: 111 RQFLGLNRRLRLPADAQKAPILPTN-------DLPTDFDWRDHGAVTGVKDQGACGSCWS 163
             + GL +   +P+ A++ P   +        D     DWR  GAVT VK+QG CG CW+
Sbjct: 118 AMYTGLRKPAAVPSGAKQIPAAGSKYQNFTRLDDDVQVDWRQQGAVTPVKNQGQCGCCWA 177

Query: 164 FSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA 223
           FSA GA+EG   ++TG LVSLSEQQ++DCD     E  G  + GCNGG M++AF+Y++  
Sbjct: 178 FSAVGAMEGLIMITTGNLVSLSEQQILDCD-----ESDG--NQGCNGGYMDNAFQYVINN 230

Query: 224 GGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGIN-- 281
           GGV  E  YPY+    G+C+    + AA +S F  + S ++   AN V + P++VG++  
Sbjct: 231 GGVTTEDAYPYSAVQ-GTCQ--NVQPAATISGFQDLPSGDENALANAVANQPVSVGVDGG 287

Query: 282 AVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENG 341
           +   Q Y GG+     CG  ++H V  +GYG+        +   YWI+KNSWG  WGENG
Sbjct: 288 SSPFQFYQGGIYDGDGCGTDMNHAVTAIGYGADD------QGTQYWILKNSWGTGWGENG 341

Query: 342 YYKICMGRNVCGVDSMVS 359
           + ++ MG   CG+ +M S
Sbjct: 342 FMQLQMGVGACGISTMAS 359


>gi|356530431|ref|XP_003533785.1| PREDICTED: cysteine proteinase [Glycine max]
          Length = 354

 Score =  215 bits (548), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 131/316 (41%), Positives = 176/316 (55%), Gaps = 30/316 (9%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLR--RAKRRQLLDPTAVHGVTKFSDLTPSEFR 110
           F+ F S+F K+Y ++EE   R+ +F  NLR  R+  ++ L  T    V  F+D T  EF+
Sbjct: 55  FARFVSRFGKSYQSEEEMKERYEIFSQNLRFIRSHNKKRLPYTL--SVNHFADWTWEEFK 112

Query: 111 RQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGAL 170
           R  LG  +      +      L    LP   DWR  G V+ VKDQG+CGSCW+FS TGAL
Sbjct: 113 RHRLGAAQNCSATLNGNHK--LTDAVLPPTKDWRKEGIVSSVKDQGSCGSCWTFSTTGAL 170

Query: 171 EGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREK 230
           E A+  + G+ +SLSEQQLVDC    +       + GC+GGL + AFEYI   GG+E E+
Sbjct: 171 EAAYAQAFGKSISLSEQQLVDCAGPFN-------NFGCHGGLPSQAFEYIKYNGGLETEE 223

Query: 231 DYPYTGTDGGSCKFDKSKIAAAV---SNFSVISSDEDQMAANLVKHGPLAVGINAV-WMQ 286
            YPYTG D G CKF    +A  V    N ++ + DE + A   V+  P++V    V    
Sbjct: 224 AYPYTGKD-GVCKFSAENVAVQVLDSVNITLGAEDELKHAVAFVR--PVSVAFQVVNGFH 280

Query: 287 TYIGGVSCPYICGKY---LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYY 343
            Y  GV     CG     ++H VL VGYG            PYW+IKNSWGE+WGENGY+
Sbjct: 281 FYENGVFTSDTCGSTSQDVNHAVLAVGYGVENGV-------PYWLIKNSWGESWGENGYF 333

Query: 344 KICMGRNVCGVDSMVS 359
           K+ +G+N+CGV +  S
Sbjct: 334 KMELGKNMCGVATCAS 349


>gi|410923307|ref|XP_003975123.1| PREDICTED: cathepsin L1-like [Takifugu rubripes]
          Length = 336

 Score =  215 bits (548), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 135/321 (42%), Positives = 178/321 (55%), Gaps = 24/321 (7%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH----GVTKFSDLT 105
           + H++L+K   SK Y  +EE  +R  V++ NL++ +   L      H    G+  F D+T
Sbjct: 25  DEHWNLWKDWHSKKYHEKEE-GWRRMVWEKNLKKIELHNLEHSMGKHTYSLGMNHFGDMT 83

Query: 106 PSEFRRQFLGLNRRLRLPADAQKAPILPTNDL--PTDFDWRDHGAVTGVKDQGACGSCWS 163
             EFR+   G   +L+     + +  +  N L  P   DWRD G VT VKDQG CGSCW+
Sbjct: 84  HEEFRQIMNGY--KLKSQRKLRGSLFMEPNFLEAPRSVDWRDKGYVTPVKDQGQCGSCWA 141

Query: 164 FSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA 223
           FS TGA+EG HF  TG LVSLSEQ LVDC     PE     + GCNGGLM+ AF+YI   
Sbjct: 142 FSTTGAMEGQHFRKTGTLVSLSEQNLVDCSR---PE----GNEGCNGGLMDQAFQYIKDN 194

Query: 224 GGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVGINA 282
           GG++ E+ YPY GTD G C +D S  +A  + F  V S  E  +   +   GP++V I+A
Sbjct: 195 GGLDSEESYPYLGTDEGPCHYDPSYNSANDTGFVDVPSGSERALMKAVASVGPVSVAIDA 254

Query: 283 VW--MQTYIGGVSCPYIC-GKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGE 339
                Q Y  G+     C  + LDHGVL+VGY   GF       K YWI+KNSW ENWG+
Sbjct: 255 GHESFQFYHSGIYYDKECSSEELDHGVLVVGY---GFEGKDVDGKKYWIVKNSWSENWGD 311

Query: 340 NGY-YKICMGRNVCGVDSMVS 359
            GY Y     +N CG+ +  S
Sbjct: 312 KGYIYMAKDKKNHCGIATAAS 332


>gi|148927396|gb|ABR19829.1| cysteine proteinase [Elaeis guineensis]
          Length = 358

 Score =  215 bits (548), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 140/375 (37%), Positives = 199/375 (53%), Gaps = 39/375 (10%)

Query: 1   MERLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNA------EHHFS 54
           M R +    L+ L S++LA A    D+  +I Q V    +  E  LL          HF+
Sbjct: 1   MARFLAFLALVFLSSAILARANHAFDEANLI-QSVTERIDSLETSLLGVLGQTRNALHFA 59

Query: 55  LFKSKFSKTYATQEEHDYRFRVFKANL---RRAKRRQLLDPTAVHGVTKFSDLTPSEFRR 111
            F  ++ K Y + EE   RF +F  NL   R   RR L  P  + G+ +++D++  EFR 
Sbjct: 60  RFAHRYGKRYQSVEEMKLRFAIFMENLELIRSTNRRGL--PYKL-GINRYADMSWEEFRA 116

Query: 112 QFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALE 171
             LG  +     A  +    +    LP   DWR+ G V+ VKDQG+CGSCW+FS TGALE
Sbjct: 117 SRLGAAQNC--SATLKGNHKMTDELLPKTKDWREDGIVSPVKDQGSCGSCWTFSTTGALE 174

Query: 172 GAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKD 231
            A+  +TG+ +SLSEQQLVDC +  +       + GCNGGL + AFEYI   GG++ E+ 
Sbjct: 175 AAYTQATGKGISLSEQQLVDCAYAFN-------NFGCNGGLPSQAFEYIKYNGGLDTEES 227

Query: 232 YPYTGTDGGSCKFDKSKIAAAV---SNFSVISSDEDQMAANLVKHGPLAVGINAV-WMQT 287
           YPY G + G C F    +   V    N ++ + DE   A  LV+  P+++    V   + 
Sbjct: 228 YPYAGVN-GFCHFKPENVGVKVVESVNITLGAEDELLHAVGLVR--PVSIAFEVVSGFRF 284

Query: 288 YIGGVSCPYICGKY---LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYK 344
           Y GGV     CG+    ++H VL VGYG            PYW+IKNSWGE WG +GY+K
Sbjct: 285 YKGGVYTSDTCGRTQMDVNHAVLAVGYGVE-------NGVPYWLIKNSWGEEWGVDGYFK 337

Query: 345 ICMGRNVCGVDSMVS 359
           + +G+N+CG+ +  S
Sbjct: 338 MELGKNMCGIATCAS 352


>gi|297802418|ref|XP_002869093.1| hypothetical protein ARALYDRAFT_491113 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297314929|gb|EFH45352.1| hypothetical protein ARALYDRAFT_491113 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 355

 Score =  215 bits (548), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 143/370 (38%), Positives = 198/370 (53%), Gaps = 47/370 (12%)

Query: 6   LSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKS---KFSK 62
            S L+ +  S++L SA+A    D  I    P       + L + E    LF+S   + SK
Sbjct: 11  FSLLVAISASALLCSALA---RDFSIVGYTP-------EQLTSTEKLLELFESWMSEHSK 60

Query: 63  TYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNR---- 118
            Y + EE  +RF VF+ NL    +R     +   G+ +F+DLT  EF+ ++LGL +    
Sbjct: 61  VYKSVEEKVHRFEVFRENLMHIDQRNNEINSYWLGLNEFADLTHEEFKGRYLGLAKPQFS 120

Query: 119 RLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLST 178
           R R P+   +   +   DLP   DWR  GAV  VKDQG CGSCW+FS   A+EG + ++T
Sbjct: 121 RKRQPSANFRYRDI--TDLPKSVDWRKKGAVAPVKDQGQCGSCWAFSTVAAVEGINQITT 178

Query: 179 GELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTD 238
           G L SLSEQ+L+DCD         + +SGCNGGLM+ AF+YI+  GG+ +E DYPY   +
Sbjct: 179 GNLSSLSEQELIDCDT--------TFNSGCNGGLMDYAFQYIISTGGLHKEDDYPYL-ME 229

Query: 239 GGSCKFDKSKIA-AAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCP 295
            G C+  K  +    +S +  +  ++D+     + H P++V I A     Q Y GGV   
Sbjct: 230 EGICQEQKEDVERVTISGYEDVPENDDESLVKALAHQPVSVAIEASGRDFQFYKGGVFNG 289

Query: 296 YICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRN----- 350
             CG  LDHGV  VGYGSS       K   Y I+KNSWG  WGE G+  I M RN     
Sbjct: 290 Q-CGTDLDHGVAAVGYGSS-------KGSDYVIVKNSWGPRWGEKGF--IRMKRNTGKPE 339

Query: 351 -VCGVDSMVS 359
            +CG++ M S
Sbjct: 340 GLCGINKMAS 349


>gi|124484387|dbj|BAF46304.1| cysteine proteinase precursor [Ipomoea nil]
          Length = 474

 Score =  215 bits (548), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 135/355 (38%), Positives = 204/355 (57%), Gaps = 33/355 (9%)

Query: 8   SLLLLLLSSVLASAVAVNDDDAMIR--QVVPSDG-EQSEDHLLNAEHHFSLFKSKFSKTY 64
           S+L   L +V+++A A  +D ++I   Q  P+ G  +SED +   +  F  +  K  K+Y
Sbjct: 5   SILFTFLFAVVSAAAAAAEDMSIITYDQQHPAKGLVRSEDEV---KEMFESWLVKHGKSY 61

Query: 65  ATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH-GVTKFSDLTPSEFRRQFLGLNR---RL 120
              +E D RF++F+ NL+    +  L+  +   G+ +F+D+T  E+R  +LG  R   R 
Sbjct: 62  NAVDEKDKRFKIFRDNLKYIDEKNSLENRSYKLGLNRFADITNEEYRTGYLGAKRDASRN 121

Query: 121 RLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGE 180
            + + + +   +  + LP   DWR+ GAVTGVKDQG+CGSCW+FS   A+EG + L+TG 
Sbjct: 122 MVKSKSDRYAPVAGDSLPDSIDWREKGAVTGVKDQGSCGSCWAFSTIAAVEGVNQLATGN 181

Query: 181 LVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDG- 239
           L+SLSEQ+LVDCD +         + GCNGG M  AF++I+K GG++ E+DYPYTG DG 
Sbjct: 182 LISLSEQELVDCDRK--------INQGCNGGDMGYAFQFIIKNGGIDSEEDYPYTGKDGK 233

Query: 240 -GSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSCPY 296
             S + + +K+ A++  +  +  + ++     V + P++V I A     Q Y  G+    
Sbjct: 234 CDSYRQNNAKV-ASIDGYEEVPVNNEKSLQKAVANQPVSVAIEAGGYDFQLYSSGIFTG- 291

Query: 297 ICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNV 351
            CG  LDHGV  VGYG+            YWI+KNSWG+ WGE GY +  M RNV
Sbjct: 292 SCGTDLDHGVAAVGYGTENGV-------DYWIVKNSWGDYWGEKGYVR--MQRNV 337


>gi|15593255|gb|AAL02223.1|AF410883_1 cysteine protease CP19 precursor [Frankliniella occidentalis]
          Length = 334

 Score =  215 bits (548), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 132/334 (39%), Positives = 175/334 (52%), Gaps = 30/334 (8%)

Query: 35  VPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKAN-LRRAKRRQLLDPT 93
           +PSD        +  + H+  FK+  +KTYA   E  YR +VFK N +R AK   L    
Sbjct: 18  IPSD--------MEIQAHWESFKATHAKTYANAVEEAYRAKVFKENAIRIAKHNDLFASG 69

Query: 94  AVH---GVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVT 150
            V    G  +++D+   E   +  G    L+  +         +       DWR  GA T
Sbjct: 70  EVTFKVGYNQYADMHTHEVTEKLNGYRSGLKQASAFVHTASNDSWPWSKKVDWRSKGAAT 129

Query: 151 GVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNG 210
            +KDQG CGSCWSFSATG+LEG  FL    LVSLSEQ LVDC  +   E       GCNG
Sbjct: 130 PIKDQGQCGSCWSFSATGSLEGQLFLKNKNLVSLSEQNLVDCSWDFGNE-------GCNG 182

Query: 211 GLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFS-VISSDEDQMAAN 269
           GLM+SAFEY+   GG++ E+ YPYT  DG SC +  +  A   + +  V +  E  +   
Sbjct: 183 GLMDSAFEYVKSNGGIDTEESYPYTAVDGDSCLYRAANNAGVNTGYKDVQAKSESALRDA 242

Query: 270 LVKHGPLAVGINAV-W-MQTYIGGVSCPYICGK-YLDHGVLIVGYGSSGFAPIRFKEKPY 326
           + K GP++V I+A  W  Q Y  G+     C   YLDHGVL VGYGS       +  K +
Sbjct: 243 VEKVGPVSVAIDASNWSFQMYSSGIYYESACSSDYLDHGVLAVGYGS------EWPNKEF 296

Query: 327 WIIKNSWGENWGENGYYKICMG-RNVCGVDSMVS 359
           WI+KNSWG +WGE GY K+    +N CG+ +  S
Sbjct: 297 WIVKNSWGTSWGEEGYIKMARNKKNNCGIATEAS 330


>gi|343472970|emb|CCD15012.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 382

 Score =  215 bits (548), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 125/314 (39%), Positives = 170/314 (54%), Gaps = 26/314 (8%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEF 109
           +  F+ FK K+S++Y    E  +RFRVFK N+ RAK     +P A  GVT+FSD++P EF
Sbjct: 38  QQQFAAFKQKYSRSYRDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSPEEF 97

Query: 110 RRQFL-GLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATG 168
           R  +  G           +K   + T   P   DWR  GAVT VKDQG C S W+FSA G
Sbjct: 98  RATYHNGAEYYAAALKRPRKVVNVSTGKAPPAIDWRKKGAVTPVKDQGQCDSSWAFSAIG 157

Query: 169 ALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA--GGV 226
            +EG   ++  EL SLSEQ LV CD         + D GC GG  + AF++I+ +  G V
Sbjct: 158 NIEGQWKVAGHELTSLSEQMLVSCD---------TNDFGCGGGFSDPAFKWIVSSNKGNV 208

Query: 227 EREKDYPYTGTDGGSCKFDKSK--IAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW 284
             E+ YPY    G     DKS   + A + +   +  DE+ +A  L K+GP+A+ ++A  
Sbjct: 209 FTEQSYPYASGGGNVPTCDKSGKVVGAKIRDRVDLPRDENAIAEWLAKNGPVAIAVDATS 268

Query: 285 MQTYIGGV--SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGY 342
            Q+Y GGV  SC     K ++  VL+VGY  +        + PYWIIKNSW + WGE GY
Sbjct: 269 FQSYTGGVLTSC---ISKEMNSAVLLVGYDDTS-------KPPYWIIKNSWSKGWGEKGY 318

Query: 343 YKICMGRNVCGVDS 356
            +I  G N C V +
Sbjct: 319 IRIEKGTNQCLVKN 332


>gi|375073984|gb|AFA34859.1| cathepsin L-like protein [Trypanosoma rangeli]
          Length = 467

 Score =  215 bits (548), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 131/316 (41%), Positives = 168/316 (53%), Gaps = 24/316 (7%)

Query: 52  HFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRR 111
           HF+ FK +  K Y +  E  +R  VFK NL  A+     +P A  GVT FSDLT  EFR 
Sbjct: 37  HFAAFKQRHGKVYRSAAEEAFRLGVFKENLLLARLHAAANPHASFGVTPFSDLTREEFRS 96

Query: 112 QF---LGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATG 168
           ++          +  A       +     P   DWR  GAVT VKDQG CGSCW+FS  G
Sbjct: 97  RYHNAAAHFAAAQKRARVPVEVEVEVGGAPAAVDWRARGAVTAVKDQGECGSCWAFSTIG 156

Query: 169 ALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYIL--KAGGV 226
            +EG   L+   L SLSEQ LV CD+          D+GC+GGLM++AF++I+    G V
Sbjct: 157 NIEGQWHLAGNPLTSLSEQMLVSCDNA---------DNGCDGGLMDNAFDWIVGKNNGTV 207

Query: 227 EREKDYPYTGTDGGSCKFDKSK--IAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW 284
             E  Y Y    G S K D S   + A +S    +  DED+MAA L  +GPLA+ ++A  
Sbjct: 208 YTEASYSYVSGGGNSQKCDMSGHVVGAVISGHVDLPKDEDKMAAWLAANGPLAIAVDATS 267

Query: 285 MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYK 344
             +Y GGV    I  + LDHGV++VGY  S          PYWIIKNSWG +WGE GY +
Sbjct: 268 FMSYTGGVLTNCISDQ-LDHGVVLVGYNDS-------SNPPYWIIKNSWGADWGEGGYIR 319

Query: 345 ICMGRNVCGVDSMVSS 360
           I  G N C V++   S
Sbjct: 320 IQKGTNQCLVNNYACS 335


>gi|18141285|gb|AAL60580.1|AF454958_1 senescence-associated cysteine protease [Brassica oleracea]
          Length = 485

 Score =  215 bits (548), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 125/354 (35%), Positives = 189/354 (53%), Gaps = 30/354 (8%)

Query: 3   RLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQ---SEDHLLNAEHHFSLFKSK 59
           +L+ S+ ++L L+ ++ S+       AM   ++  D      S          +  +  K
Sbjct: 2   KLLNSATVILFLTMIVVSS-------AMDMSIISYDKNHHTVSSRSDAEVSRLYEEWLVK 54

Query: 60  FSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRR 119
             K   +  E D RF +FK NLR        + +   G+TKF+DLT  E+R  +LG   +
Sbjct: 55  HGKAQNSLTEKDRRFEIFKDNLRFIDEHNGKNLSYRLGLTKFADLTNDEYRSMYLGSRLK 114

Query: 120 LRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTG 179
            +    + +  +   + +P   DWR  GAV  VKDQG+CGSCW+FS  GA+EG + + TG
Sbjct: 115 RKATKSSLRYEVRVGDAIPESVDWRKEGAVAEVKDQGSCGSCWAFSTIGAVEGINKIVTG 174

Query: 180 ELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDG 239
           +L++LSEQ+LVDCD         S + GCNGGLM+ AFE+I+  GG++ E+DYPY G DG
Sbjct: 175 DLITLSEQELVDCDT--------SYNEGCNGGLMDYAFEFIINNGGIDTEEDYPYKGVDG 226

Query: 240 GSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGIN--AVWMQTYIGGVSCPYI 297
              +  K+     +  +  + ++ ++     + H P++V I       Q Y  G+    I
Sbjct: 227 RCDQTRKNAKVVTIDLYEDVPANSEESLKKALSHQPISVAIEGGGRAFQLYDSGIF-DGI 285

Query: 298 CGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNV 351
           CG  LDHGV+ VGYG+          K YWI+KNSWG +WGE+GY +  M RN+
Sbjct: 286 CGTDLDHGVVAVGYGTE-------NGKDYWIVKNSWGTSWGESGYIR--MERNI 330


>gi|20069912|ref|NP_613116.1| cathepsin [Mamestra configurata NPV-A]
 gi|37077373|sp|Q8QLK1.1|CATV_NPVMC RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|20043306|gb|AAM09141.1| cathepsin [Mamestra configurata NPV-A]
 gi|33331744|gb|AAQ11052.1| putative cysteine proteinase [Mamestra configurata NPV-A]
          Length = 337

 Score =  215 bits (548), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 130/369 (35%), Positives = 203/369 (55%), Gaps = 43/369 (11%)

Query: 6   LSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYA 65
           ++ +L+LLL   L SAV  + D     QVV    + +  ++ +A  +F  F S+++K Y+
Sbjct: 1   MNKILILLL---LVSAVLTSHD-----QVVAVTIKPNLYNINSAPLYFEKFISQYNKQYS 52

Query: 66  TQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPAD 125
           +++E  YR+ +F+ N+     +   + +AV+ + +F+D+T +E       +NR   L + 
Sbjct: 53  SEDEKKYRYNIFRHNIESINAKNSRNDSAVYKINRFADMTKNEV------VNRHTGLASG 106

Query: 126 AQKAPILPT--------NDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLS 177
              A    T           P +FDWR++  VT VKDQG CG+CW+F+  GALE  + + 
Sbjct: 107 DIGANFCETIVVDGPGQRQRPANFDWRNYNKVTSVKDQGMCGACWAFAGLGALESQYAIK 166

Query: 178 TGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGT 237
              L+ L+EQQLVDCD           D GC+GGL+++A+E I+  GGVE+E DYPY   
Sbjct: 167 YDRLIDLAEQQLVDCDF---------VDMGCDGGLIHTAYEQIMHIGGVEQEYDYPYKAV 217

Query: 238 DGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKH-GPLAVGINAVWMQTYIGGVSCP 295
               C     K A  V N +  +   E+++  +L++H GP+A+ ++AV +  Y GGV   
Sbjct: 218 R-LPCAVKPHKFAVGVRNCYRYVLLSEERL-EDLLRHVGPIAIAVDAVDLTDYYGGV-IS 274

Query: 296 YICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVD 355
           +     L+H VL+VGYG            PYW IKNSWG ++GENGY +I  G N CG+ 
Sbjct: 275 FCENNGLNHAVLLVGYGIE-------NNVPYWTIKNSWGSDYGENGYVRIRRGVNSCGMI 327

Query: 356 SMVSSVAAI 364
           + ++S A I
Sbjct: 328 NELASSAQI 336


>gi|71084302|gb|AAZ23596.1| cysteine protease [Leishmania aethiopica]
          Length = 443

 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 129/313 (41%), Positives = 169/313 (53%), Gaps = 34/313 (10%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           F  FK  + + Y T  E   R   F+ NL   +  Q  +P A  G+TKF DL+ +EF  +
Sbjct: 38  FEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 113 FLGLNRRLRLPADAQKA------PILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSA 166
           +L  N      A  Q A           + +P   DWR+ GAVT VK+QGACGSCW+FS 
Sbjct: 98  YL--NGAAYFAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSCWAFSV 155

Query: 167 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK--AG 224
            G +E    ++   L +LSEQQLV CD           DSGC GGLM  AFE++L+   G
Sbjct: 156 VGNIESQWAVAGHRLTALSEQQLVSCD---------DMDSGCGGGLMTQAFEWLLRNMNG 206

Query: 225 GVEREKDYPYTGTDG--GSCKFDKSKIAAA-VSNFSVISSDEDQMAANLVKHGPLAVGIN 281
            +  E  YPY  T G    C      +  A +  + +I S+E  MAA L K GP+++G++
Sbjct: 207 TMFTEDSYPYVSTFGYVPECTNSSQLVPGARIDGYVMIESNETVMAAWLAKSGPISIGVD 266

Query: 282 AVWMQTYIGGV--SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGE 339
           A    +Y GGV  SC    GK L+HGVL+VGY  +G       E PYW+IKNSWGENWGE
Sbjct: 267 ASSFMSYHGGVLTSC---AGKQLNHGVLLVGYNMTG-------EVPYWVIKNSWGENWGE 316

Query: 340 NGYYKICMGRNVC 352
            GY ++ MG N C
Sbjct: 317 KGYVRVTMGVNAC 329


>gi|57282619|emb|CAE54307.1| cysteine proteinase [Gossypium hirsutum]
          Length = 372

 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 133/321 (41%), Positives = 184/321 (57%), Gaps = 43/321 (13%)

Query: 55  LFKS---KFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH-GVTKFSDLTPSEFR 110
           L+KS   +  K Y    E + RF +FK NLR        + T    G+ KF+DLT  E+R
Sbjct: 45  LYKSWVIQHGKAYNGIGEEEKRFEIFKDNLRFIDEHNSNNNTTYKLGLNKFADLTNQEYR 104

Query: 111 RQFLGLN----RRL---RLPAD--AQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSC 161
            +FLG      RRL   ++P+   A +A     ++LP   +WRDHGAV+ VKDQG+CGSC
Sbjct: 105 AKFLGTRTDPRRRLMKSKIPSSRYAHRA----GDNLPDSVNWRDHGAVSRVKDQGSCGSC 160

Query: 162 WSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYIL 221
           W+FSA  A+EG + + +GEL+SLSEQ+LVDCD         S D+GCNGGLM+ AF++I+
Sbjct: 161 WAFSAIAAVEGINKIVSGELISLSEQELVDCDR--------SYDAGCNGGLMDYAFQFII 212

Query: 222 KAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGIN 281
             GG++ EKDYPY G +       K+    ++  +  + ++E+ +    V H P+++ I 
Sbjct: 213 DNGGIDTEKDYPYLGFNNQCDPTKKNAKVVSIDGYEDVPNNENALKK-AVAHQPVSIAIE 271

Query: 282 A--VWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGE 339
           A     Q Y  GV     CG  LDHGV+ VGYGS          + YWI++NSWG NWGE
Sbjct: 272 AGGRAFQLYESGVFNGE-CGLALDHGVVAVGYGSDDNG------QDYWIVRNSWGGNWGE 324

Query: 340 NGYYKICMGRNV------CGV 354
           NGY  I M RN+      CG+
Sbjct: 325 NGY--IRMERNINANTGKCGI 343


>gi|348564702|ref|XP_003468143.1| PREDICTED: cathepsin F-like [Cavia porcellus]
          Length = 462

 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 134/314 (42%), Positives = 181/314 (57%), Gaps = 26/314 (8%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTPSEFRR 111
           F  F + +++TY ++EE  +R  VF  N+  A++ Q LD  TA +GVTKFSDLT  EFR 
Sbjct: 165 FKKFVATYNRTYESKEETQWRLSVFTRNMILAQKIQALDRGTAQYGVTKFSDLTEEEFRT 224

Query: 112 QFLGLNRRLRL-PADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGAL 170
            +L  N  LR  P+   +   +  +  P ++DWR  GAVT VK+QG CGSCW+FS TG +
Sbjct: 225 IYL--NPLLREHPSKTMRQAKIVHDSAPPEWDWRKKGAVTEVKNQGMCGSCWAFSVTGNV 282

Query: 171 EGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREK 230
           EG  FL  G L+SLSEQ+L+DCD           D  C GGL  +A+  I   GG+E E 
Sbjct: 283 EGQWFLKKGTLLSLSEQELLDCD---------KVDKACMGGLPINAYSAIKSLGGLETED 333

Query: 231 DYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIG 290
           DY Y G    +C F   K    +++   +S +E  +AA L   GP+++ INA  MQ Y  
Sbjct: 334 DYSYQG-HMEACNFSAKKAKVYINDSVELSKNEQYLAAWLAVKGPISIAINAFGMQFYRH 392

Query: 291 GVSCPY--ICGK-YLDHGVLIVGYGS-SGFAPIRFKEKPYWIIKNSWGENWGENGYYKIC 346
           G++ P   +C   ++DH +LIVGYG  SG         P+W IKNSWG +WGE GYY + 
Sbjct: 393 GIAHPLQPLCSPWFIDHAMLIVGYGKRSGV--------PFWAIKNSWGTDWGEEGYYYLH 444

Query: 347 MGRNVCGVDSMVSS 360
            G   CGV+ M SS
Sbjct: 445 RGSRSCGVNVMASS 458


>gi|161408095|dbj|BAF94151.1| cathepsin L-like cysteine protease 1 [Plautia stali]
          Length = 344

 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 125/327 (38%), Positives = 173/327 (52%), Gaps = 27/327 (8%)

Query: 45  HLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAK----RRQLLDPTAVHGVTK 100
           ++  A   F+ FKS++ K Y +     YR +V+K N +  +    R +  + T    +  
Sbjct: 15  YIAEAASEFTRFKSQYRKDYPSDSVERYRKKVYKQNEKFVREHNERYERGEVTYKMALNH 74

Query: 101 FSDLTPSEFRRQFLGLNRRLRLPADAQKA-PILPTND--LPTDFDWRDHGAVTGVKDQGA 157
            +D+ P EF   FLG NR LR      +  P     D  +  + DWR  GA++ VKDQG 
Sbjct: 75  LADMHPREFMATFLGFNRSLRATNKVPEGIPFRHNKDAVIQKEVDWRQKGAISPVKDQGH 134

Query: 158 CGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAF 217
           CGSCW+FS+TGALE   FL  G  VSLSEQ L+DC            ++GC GGLM  AF
Sbjct: 135 CGSCWAFSSTGALEAHTFLKKGRRVSLSEQNLIDCS-------LNYGNNGCEGGLMEQAF 187

Query: 218 EYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVI-SSDEDQMAANLVKHGPL 276
           +Y+    G++ E+ YPY G D   C+F K+ + A  + F  I S DE  +   +   GPL
Sbjct: 188 QYVRDNDGIDTEEAYPYEGED-SECRFKKNNVGATDAGFVTIPSGDEQALMEAVATQGPL 246

Query: 277 AVGINAV--WMQTYIGGVSC-PYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSW 333
           ++ I+A     Q Y  GV   P      LDHGVL+VGYG         K++ YW++KNSW
Sbjct: 247 SIAIDASNPSFQFYSEGVYYEPECSSAQLDHGVLLVGYGVE-------KDQKYWLVKNSW 299

Query: 334 GENWGENGYYKICMGR-NVCGVDSMVS 359
            E WGENGY K+   + N CG+ +  S
Sbjct: 300 SEQWGENGYIKMARNKDNNCGIATQAS 326


>gi|18141283|gb|AAL60579.1|AF454957_1 senescence-associated cysteine protease [Brassica oleracea]
          Length = 460

 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 117/286 (40%), Positives = 164/286 (57%), Gaps = 20/286 (6%)

Query: 68  EEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQ 127
           EE D RF +FK NLR        + +   G+T+F+DLT  E+R  +LG   + R+   + 
Sbjct: 68  EEKDQRFEIFKDNLRFIDEHNNKNLSYKLGLTRFADLTNEEYRSIYLGAKSKKRVLKTSD 127

Query: 128 KAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQ 187
           +      + +P   DWR  GAV  VKDQG+CGSCW+FS  GA+EG + + TG+L+SLSEQ
Sbjct: 128 RYQPRVGDAIPDSVDWRKEGAVAAVKDQGSCGSCWAFSTIGAVEGINKIVTGDLISLSEQ 187

Query: 188 QLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKS 247
           +LVDCD         S + GCNGGLM+ AFE+I+K GG++ E+DYPY   DG   +  K+
Sbjct: 188 ELVDCDT--------SYNQGCNGGLMDYAFEFIIKNGGIDTEEDYPYKAADGRCDQTRKN 239

Query: 248 KIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSCPYICGKYLDHG 305
                +  +  +  + +      + + P++V I A     Q Y  GV    ICG  LDHG
Sbjct: 240 AKVVTIDAYEDVPENNEAALKKTLANQPISVAIEAGGRAFQLYSSGVF-DGICGTELDHG 298

Query: 306 VLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNV 351
           V+ VGYG+          K YWI++NSWG +WGE+GY K  M RN+
Sbjct: 299 VVAVGYGTE-------NGKDYWIVRNSWGGSWGESGYIK--MARNI 335


>gi|154183745|gb|ABS70713.1| cathepsin L-like cysteine proteinase [Dermacentor variabilis]
          Length = 333

 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 135/321 (42%), Positives = 173/321 (53%), Gaps = 30/321 (9%)

Query: 52  HFSLFKSKFSKTYATQEEHDYRFRVFKAN-LRRAKRRQLLDPTAVH---GVTKFSDLTPS 107
            +  FK+   K+Y +  E   RF++F  N L  A+  +      V    G+ +F DL P 
Sbjct: 26  QWEAFKATHKKSYQSNMEELLRFKIFSENSLLVARHNEKYARGLVSYKLGMNQFGDLLPH 85

Query: 108 EFRRQFLGLNRRLRLPADAQKAPILPTN----DLPTDFDWRDHGAVTGVKDQGACGSCWS 163
           EF R F G   R    A      + P N     LP   DWR+ GAVT VK+QG CGSCW+
Sbjct: 86  EFARMFNGY--RGARTAGRGSTFLPPANVNYSSLPQSMDWREKGAVTPVKNQGQCGSCWA 143

Query: 164 FSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA 223
           FS TG+LEG HFL TG LVSLSEQ LVDC      E  G  + GC GGLM++AF+YI   
Sbjct: 144 FSTTGSLEGQHFLKTGVLVSLSEQNLVDC-----SETFG--NHGCEGGLMDNAFQYIKAN 196

Query: 224 GGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISS-DEDQMAANLVKHGPLAVGINA 282
           GG++ EK YPY   D G C+F K  + A  + F  I    ED +   +   GP++V I+A
Sbjct: 197 GGIDTEKSYPYEAED-GECRFKKQNVGATDTGFVDIEQGSEDDLKKAVATVGPVSVAIDA 255

Query: 283 VW--MQTYIGGVSCPYIC-GKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGE 339
                Q Y  GV     C  + LDHGVL+VGYG           K YW++KNSW E+WG+
Sbjct: 256 SHSSFQLYSEGVYDETECSSEQLDHGVLVVGYGVE-------DGKKYWLVKNSWAESWGD 308

Query: 340 NGYYKICMGR-NVCGVDSMVS 359
           NGY K+   + N CG+ S  S
Sbjct: 309 NGYIKMSRDKDNQCGIASAAS 329


>gi|355344587|gb|AER60490.1| cysteine proteases [Gossypium hirsutum]
          Length = 371

 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 132/321 (41%), Positives = 182/321 (56%), Gaps = 43/321 (13%)

Query: 55  LFKS---KFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH-GVTKFSDLTPSEFR 110
           L+KS   +  K Y    E + RF +FK NLR        + T    G+ KF+DLT  E+R
Sbjct: 44  LYKSWVIQHGKAYNGIGEEEKRFEIFKDNLRFIDEHNSNNNTTYKLGLNKFADLTNQEYR 103

Query: 111 RQFLGLN----RRL---RLPAD--AQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSC 161
            +FLG      RRL   ++P+   A +A     ++LP   DWRDHGAV+ VKDQG+CGSC
Sbjct: 104 AKFLGTRTDPRRRLMKSKIPSSRYAHRA----GDNLPDSVDWRDHGAVSPVKDQGSCGSC 159

Query: 162 WSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYIL 221
           W+FS    +EG + + +GELVSLSEQ+LVDCD         S D+GCNGGLM+ AF++I+
Sbjct: 160 WAFSTIATVEGINKIVSGELVSLSEQELVDCDR--------SYDAGCNGGLMDYAFQFIM 211

Query: 222 KAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGIN 281
             GG++ EKDYPY G +       K+    ++  +  + ++E+ +    V H P+++ I 
Sbjct: 212 DNGGIDTEKDYPYLGFNNQCDPTKKNAKVVSIDGYEDVPNNENALKK-AVAHQPVSIAIE 270

Query: 282 A--VWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGE 339
           A     Q Y  GV     CG  LDHGV+ VGYG+          + YWI++NSWG NWGE
Sbjct: 271 AGGRAFQLYESGVFNGE-CGLALDHGVVAVGYGTDDNG------QDYWIVRNSWGSNWGE 323

Query: 340 NGYYKICMGRNV------CGV 354
           NGY  I M RN+      CG+
Sbjct: 324 NGY--IRMERNINANTGKCGI 342


>gi|30142040|gb|AAN34825.1| cysteine proteinase [Leishmania amazonensis]
 gi|30142042|gb|AAN34826.1| cysteine proteinase [Leishmania amazonensis]
 gi|30142572|gb|AAP21894.1| cysteine proteinase [Leishmania amazonensis]
          Length = 354

 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 138/367 (37%), Positives = 199/367 (54%), Gaps = 39/367 (10%)

Query: 12  LLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHD 71
           LL + V+     V    A+I Q  P+      D+ + A  H+  FK + SK +    E  
Sbjct: 7   LLFAIVVTILFVVCYGSALIAQTPPA-----VDNFV-ASAHYGSFKKRHSKAFGGDAEEG 60

Query: 72  YRFRVFKANLRRAKRRQLLDPTAVHGVT-KFSDLTPSEFRRQFLGLNRRLRLPADAQKAP 130
           +RF  FK N++ A      +P A + V+ KF+DLTP EF + +L  +       D  K  
Sbjct: 61  HRFNAFKQNMQTAYFLNTQNPHAHYDVSGKFADLTPQEFAKLYLNPDYYTSHLKD-HKED 119

Query: 131 ILPTNDLPT---DFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQ 187
           +   +  P+     DWRD GAVT VK+QG CGSCW+FSA G +EG    S   LVSLSEQ
Sbjct: 120 VHVDDSAPSGVMSVDWRDKGAVTPVKNQGLCGSCWAFSAIGNIEGQWAASGHSLVSLSEQ 179

Query: 188 QLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA--GGVEREKDYPYTGTDGGSCK-- 243
            LV CD         + D GCNGGLM+ A  +I+++  G V  E  YPY  T GG  +  
Sbjct: 180 MLVSCD---------NVDEGCNGGLMDQAMNWIMQSHNGSVFTEASYPY--TSGGGTRPP 228

Query: 244 -FDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKY- 301
             D+ ++ A ++ F  +  DE+++A  + K GP+AV ++A   Q Y GGV    +C  + 
Sbjct: 229 CHDEGEVGAKITGFLSLPHDEERIADWVEKRGPVAVAVDATTWQLYFGGVVS--LCLAWS 286

Query: 302 LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDS--MVS 359
           L+HGVLIVG+  +        + PYWI+KNSWG +WGE GY ++ MG N C + +  + +
Sbjct: 287 LNHGVLIVGFNKNA-------KPPYWIVKNSWGSSWGEKGYIRLAMGSNQCMLKNYPVSA 339

Query: 360 SVAAIHT 366
           +V + HT
Sbjct: 340 TVESPHT 346


>gi|332326585|gb|AEE42616.1| cysteine protease [Leishmania aethiopica]
          Length = 443

 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 127/313 (40%), Positives = 170/313 (54%), Gaps = 34/313 (10%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           F  FK  + + Y T  E   R   F+ NL   +  Q  +P A  G+TKF DL+ +EF  +
Sbjct: 38  FEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 113 FLGLNRRLRLPADAQKA------PILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSA 166
           +L  N      A  Q A           + +P   DWR+ GAVT VKBQGACGSCW+FSA
Sbjct: 98  YL--NGAAYFAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKBQGACGSCWAFSA 155

Query: 167 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA--G 224
            G +E    ++   L  LSEQQLV CD +         DSGC GGLM  AFE++L+   G
Sbjct: 156 VGNIESQWAVAGHRLXXLSEQQLVSCDDK---------DSGCXGGLMTQAFEWLLRXMNG 206

Query: 225 GVEREKDYPYTGTDGG--SCKFDKSKIAAA-VSNFSVISSDEDQMAANLVKHGPLAVGIN 281
            +  E  YPY  + G    C      +  A +  + +I S+E  MAA L K GP+++G++
Sbjct: 207 TMFTEDSYPYVSSTGDVPECTNSSELVPGARIDGYVMIESNETVMAAWLAKSGPISIGVD 266

Query: 282 AVWMQTYIGGV--SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGE 339
           A    +Y  GV  SC    GK+L+HGVL+VGY  +G       E PYW+IKNSWGE+WGE
Sbjct: 267 ASSFMSYESGVLTSC---AGKHLNHGVLLVGYNMTG-------EVPYWVIKNSWGEDWGE 316

Query: 340 NGYYKICMGRNVC 352
            GY ++ MG N C
Sbjct: 317 KGYVRVTMGVNAC 329


>gi|167521499|ref|XP_001745088.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163776702|gb|EDQ90321.1| predicted protein [Monosiga brevicollis MX1]
          Length = 294

 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 130/307 (42%), Positives = 173/307 (56%), Gaps = 33/307 (10%)

Query: 56  FKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH----GVTKFSDLTPSEFRR 111
           FKS +SK+Y ++     R   F+ANL    +        +H    GV +F+DLT  EF  
Sbjct: 1   FKSDYSKSYESEAVEAKRLAAFEANLEFINKHNAEHAQGLHSYTVGVNEFADLTIDEFMA 60

Query: 112 QFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALE 171
            ++       +P +    P    + +    DWR  GAVT +K+QG CGSCWSFS TG+ E
Sbjct: 61  LYVPSKFNRTMPYNTVYLPATSEDSV----DWRTKGAVTPIKNQGQCGSCWSFSTTGSTE 116

Query: 172 GAHFLSTGELVSLSEQQLVDCDHECDPEESGSC-DSGCNGGLMNSAFEYILKAGGVEREK 230
           GAH ++TG LVSLSEQQLVDC        SGS  + GCNGGLM+ AF+YI+   G++ E+
Sbjct: 117 GAHAIATGNLVSLSEQQLVDC--------SGSFGNQGCNGGLMDDAFKYIISNKGLDTEE 168

Query: 231 DYPYTGTDGGSCKFDKSKIAAAVSNFS-VISSDEDQMAANLVKHGPLAVGINA--VWMQT 287
           DYPYT  DG   K  ++K AA +S++S V  ++EDQ+AA + K GP++V I A     Q 
Sbjct: 169 DYPYTAQDGTCNKEKEAKHAATISSYSDVPKNNEDQLAAAVAK-GPVSVAIEADQSGFQL 227

Query: 288 YIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICM 347
           Y  GV     CG  LDHGVL+VGY              YWI+KNSWG  WG  GY  +  
Sbjct: 228 YKSGV-FDGNCGTNLDHGVLVVGY-----------TDDYWIVKNSWGTTWGVEGYINMKR 275

Query: 348 GRNVCGV 354
           G +  G+
Sbjct: 276 GVSASGI 282


>gi|394331743|gb|AFN27094.1| cysteine protease [Leishmania major]
          Length = 348

 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 128/312 (41%), Positives = 173/312 (55%), Gaps = 32/312 (10%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           F  FK  + + Y T  E   R   F+ NL   +  Q  +P A  G+TKF DL+ +EF  +
Sbjct: 38  FEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 113 FLGLNRRLRLPADAQKA------PILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSA 166
           +L  N      A  Q A           + +P   DWR+ GAVT VK+QGACGSCW+FSA
Sbjct: 98  YL--NGAAYFAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSCWAFSA 155

Query: 167 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK--AG 224
            G +E    ++  +LV LSEQQLV CDH          D+GC GGLM  AFE++L+   G
Sbjct: 156 VGNIESQWAVAGHKLVRLSEQQLVSCDH---------VDNGCGGGLMLQAFEWVLRNMNG 206

Query: 225 GVEREKDYPYTGTDGG--SCKFDKSKIA--AAVSNFSVISSDEDQMAANLVKHGPLAVGI 280
            V  EK YPY   +G    C  + S++A  A +  +  + S E  MAA L K+GP+++ +
Sbjct: 207 TVFTEKSYPYVSGNGDVPECS-NSSELAPGARIDGYVSMESSERVMAAWLAKNGPISIAV 265

Query: 281 NAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGEN 340
           +A    +Y  GV    I G+ L+HGVL+VGY  +G       E PYW+IKNSWGE+WGE 
Sbjct: 266 DASSFMSYHSGVLTSCI-GEQLNHGVLLVGYNMTG-------EVPYWVIKNSWGEDWGEK 317

Query: 341 GYYKICMGRNVC 352
           GY ++ MG N C
Sbjct: 318 GYVRVTMGVNAC 329


>gi|340503366|gb|EGR29962.1| hypothetical protein IMG5_145110 [Ichthyophthirius multifiliis]
          Length = 1095

 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 107/275 (38%), Positives = 159/275 (57%), Gaps = 23/275 (8%)

Query: 93   TAVHGVTKFSDLTPSEFRRQFLGLNRR--LRLPADAQK--APILP----TNDLPTDFDWR 144
            +AV G TKFSDL+P +F ++ L LN++  L++  + +K   PI        ++P  FDWR
Sbjct: 831  SAVFGHTKFSDLSPQQFAQKHLKLNQKKLLQVKKETKKLTTPIQQDITVEENVPEQFDWR 890

Query: 145  DHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSC 204
            D   VT  K Q  CGSCW+FS TG +E  + +   +LV  SEQQLVDCD           
Sbjct: 891  DRNVVTEPKYQNTCGSCWTFSTTGVIESQYAIKHQKLVPFSEQQLVDCD---------DI 941

Query: 205  DSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDED 264
            + GC+GGLM  A++Y+ ++GG+E  +DY         CKFD +K+ A +  +  I  DE+
Sbjct: 942  NDGCHGGLMTDAYKYLQQSGGLEFAEDYGDYKNKKEKCKFDLNKVQAKIKEWQQIDEDEE 1001

Query: 265  QMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEK 324
             +   L ++GP+A G+NA  +Q Y  G+  P  C   ++H +LIVGYG      +    +
Sbjct: 1002 IIKKQLYQNGPIAAGVNARLLQFYKSGIFDPKECDSDINHAILIVGYG------VEKDGQ 1055

Query: 325  PYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVS 359
             YWIIKN WG++WG +GY+K+  G+  CG+ +  S
Sbjct: 1056 KYWIIKNQWGKDWGMDGYFKLARGKKQCGIHTYAS 1090


>gi|156398078|ref|XP_001638016.1| predicted protein [Nematostella vectensis]
 gi|156225133|gb|EDO45953.1| predicted protein [Nematostella vectensis]
          Length = 326

 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 124/311 (39%), Positives = 170/311 (54%), Gaps = 25/311 (8%)

Query: 56  FKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLG 115
           +KS   K+Y+   E   R  +++ NL + KR    D +    +    DLT  EFR  +LG
Sbjct: 30  WKSYHGKSYSDVHEERTRMAIWQQNLEKIKRHNAEDHSYKMAMNHLGDLTEDEFRYFYLG 89

Query: 116 LNRRLRLPADAQKAPILPTN-DLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAH 174
           +              + P+N  +P+  DW   G VTGVK+QG CGSCW+FS TG++EG H
Sbjct: 90  VRAHHNSTKRGWATYMPPSNVKIPSSVDWSQKGYVTGVKNQGQCGSCWAFSTTGSVEGQH 149

Query: 175 FLSTGELVSLSEQQLVDCDHECDPEESGSC-DSGCNGGLMNSAFEYILKAGGVEREKDYP 233
           F  TG LVSLSEQ L+DC        SGS  ++GC GGLM++AF YI   GG++ E  YP
Sbjct: 150 FRKTGSLVSLSEQNLIDC--------SGSYGNNGCQGGLMDNAFRYIESNGGIDTESSYP 201

Query: 234 YTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQ-MAANLVKHGPLAVGINAVWMQTYIGGV 292
           Y G   GSC F  S + A V+ +  I    +Q + + +   GP++V ++A   Q Y  GV
Sbjct: 202 YLGQQ-GSCHFSSSHVGARVTGYQDIPQGSEQALQSAVATVGPVSVAVDASQWQFYSSGV 260

Query: 293 -SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-- 349
              PY     LDHGVL++GYG+       +  + YW++KNSWG +WG  GY  I M R  
Sbjct: 261 YDNPYCSSTQLDHGVLVIGYGN-------YNGQDYWLVKNSWGYSWGVEGY--IMMSRNK 311

Query: 350 -NVCGVDSMVS 359
            N CG+ S  S
Sbjct: 312 NNQCGIASSAS 322


>gi|2677828|gb|AAB97142.1| cysteine protease [Prunus armeniaca]
          Length = 358

 Score =  215 bits (547), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 143/371 (38%), Positives = 203/371 (54%), Gaps = 38/371 (10%)

Query: 4   LILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDG----EQSEDHLLNAEH---HFSLF 56
           L+LS+ L+L+  S  A+A +  D+   IR V  SDG    EQ    +L       HF+ F
Sbjct: 6   LVLSAALVLVAISCGAAASSF-DESNPIRLV--SDGLRELEQQVVQVLGNSRRALHFARF 62

Query: 57  KSKFSKTYATQEEHDYRFRVFKAN--LRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFL 114
             ++ K Y + EE   R+ +F  N  L R+  ++ L  T    V +F+D +  EFRRQ L
Sbjct: 63  AHRYGKKYESVEEMKLRYEIFSENKKLIRSTNKKGLPYTL--AVNRFADWSWEEFRRQRL 120

Query: 115 GLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAH 174
           G  +     A  + +  L    LP   +WR+ G VT VKDQG CGSCW+FS TGALE A+
Sbjct: 121 GAAQNC--SATTKGSHELTDAVLPESKNWREEGIVTPVKDQGHCGSCWTFSTTGALEAAY 178

Query: 175 FLSTGELVSLSEQQLVDCDHECDPEESGSCDS-GCNGGLMNSAFEYILKAGGVEREKDYP 233
             +  + +SLSEQQLVDC        +G+ ++ GC+GGL + AFEYI   GG++ E  YP
Sbjct: 179 VQAFRKQISLSEQQLVDC--------AGAFNNFGCHGGLPSQAFEYIKYNGGLDTEAAYP 230

Query: 234 YTGTDGGSCKFDKSKIAAAV-SNFSVISSDEDQMAANLVKHGPLAVGINAVW-MQTYIGG 291
           Y GTD G+CKF    +   V  + ++   DE ++   +    P++V    V   + Y  G
Sbjct: 231 YVGTD-GACKFSAENVGVQVLDSVNITLGDEQELKHAVAFVRPVSVAFQVVKSFRIYKSG 289

Query: 292 VSCPYICGKY---LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMG 348
           V     CG     ++H VL VGYG  G         P+W+IKNSWGE+WG+NGY+K+  G
Sbjct: 290 VYTSDTCGSSPMDVNHAVLAVGYGEEGGV-------PFWLIKNSWGESWGDNGYFKMEFG 342

Query: 349 RNVCGVDSMVS 359
           +N+CGV +  S
Sbjct: 343 KNMCGVATCAS 353


>gi|157864851|ref|XP_001681134.1| cathepsin L-like protease [Leishmania major strain Friedlin]
 gi|68124428|emb|CAJ02284.1| cathepsin L-like protease [Leishmania major strain Friedlin]
 gi|378943050|gb|AFC76266.1| cathepsin L-like protease [Leishmania major]
 gi|378943052|gb|AFC76267.1| cathepsin L-like protease [Leishmania major]
 gi|378943054|gb|AFC76268.1| cathepsin L-like protease [Leishmania major]
 gi|378943058|gb|AFC76270.1| cathepsin L-like protease [Leishmania major]
 gi|394331737|gb|AFN27091.1| cysteine protease [Leishmania major]
 gi|394331741|gb|AFN27093.1| cysteine protease [Leishmania major]
 gi|394331747|gb|AFN27096.1| cysteine protease [Leishmania major]
 gi|394331749|gb|AFN27097.1| cysteine protease [Leishmania major]
 gi|394331751|gb|AFN27098.1| cysteine protease [Leishmania major]
 gi|394331753|gb|AFN27099.1| cysteine protease [Leishmania major]
 gi|394331755|gb|AFN27100.1| cysteine protease [Leishmania major]
 gi|394331757|gb|AFN27101.1| cysteine protease [Leishmania major]
 gi|394331759|gb|AFN27102.1| cysteine protease [Leishmania major]
 gi|394331761|gb|AFN27103.1| cysteine protease [Leishmania major]
 gi|394331763|gb|AFN27104.1| cysteine protease [Leishmania major]
 gi|394331765|gb|AFN27105.1| cysteine protease [Leishmania major]
 gi|394331767|gb|AFN27106.1| cysteine protease [Leishmania major]
 gi|394331769|gb|AFN27107.1| cysteine protease [Leishmania major]
 gi|394331771|gb|AFN27108.1| cysteine protease [Leishmania major]
 gi|394331773|gb|AFN27109.1| cysteine protease [Leishmania major]
 gi|394331775|gb|AFN27110.1| cysteine protease [Leishmania major]
 gi|394331777|gb|AFN27111.1| cysteine protease [Leishmania major]
 gi|394331779|gb|AFN27112.1| cysteine protease [Leishmania major]
 gi|394331781|gb|AFN27113.1| cysteine protease [Leishmania major]
 gi|394331783|gb|AFN27114.1| cysteine protease [Leishmania major]
 gi|394331785|gb|AFN27115.1| cysteine protease [Leishmania major]
 gi|394331787|gb|AFN27116.1| cysteine protease [Leishmania major]
 gi|394331789|gb|AFN27117.1| cysteine protease [Leishmania major]
 gi|394331791|gb|AFN27118.1| cysteine protease [Leishmania major]
 gi|394331793|gb|AFN27119.1| cysteine protease [Leishmania major]
 gi|394331795|gb|AFN27120.1| cysteine protease [Leishmania major]
 gi|394331797|gb|AFN27121.1| cysteine protease [Leishmania major]
 gi|394331799|gb|AFN27122.1| cysteine protease [Leishmania major]
 gi|394331801|gb|AFN27123.1| cysteine protease [Leishmania major]
 gi|394331803|gb|AFN27124.1| cysteine protease [Leishmania major]
          Length = 348

 Score =  215 bits (547), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 128/312 (41%), Positives = 173/312 (55%), Gaps = 32/312 (10%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           F  FK  + + Y T  E   R   F+ NL   +  Q  +P A  G+TKF DL+ +EF  +
Sbjct: 38  FEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 113 FLGLNRRLRLPADAQKA------PILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSA 166
           +L  N      A  Q A           + +P   DWR+ GAVT VK+QGACGSCW+FSA
Sbjct: 98  YL--NGAAYFAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSCWAFSA 155

Query: 167 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK--AG 224
            G +E    ++  +LV LSEQQLV CDH          D+GC GGLM  AFE++L+   G
Sbjct: 156 VGNIESQWAVAGHKLVRLSEQQLVSCDH---------VDNGCGGGLMLQAFEWVLRNMNG 206

Query: 225 GVEREKDYPYTGTDGG--SCKFDKSKIA--AAVSNFSVISSDEDQMAANLVKHGPLAVGI 280
            V  EK YPY   +G    C  + S++A  A +  +  + S E  MAA L K+GP+++ +
Sbjct: 207 TVFTEKSYPYVSGNGDVPECS-NSSELAPGARIDGYVSMESSERVMAAWLAKNGPISIAV 265

Query: 281 NAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGEN 340
           +A    +Y  GV    I G+ L+HGVL+VGY  +G       E PYW+IKNSWGE+WGE 
Sbjct: 266 DASSFMSYHSGVLTSCI-GEQLNHGVLLVGYNMTG-------EVPYWVIKNSWGEDWGEK 317

Query: 341 GYYKICMGRNVC 352
           GY ++ MG N C
Sbjct: 318 GYVRVTMGVNAC 329


>gi|378943046|gb|AFC76264.1| cathepsin L-like protease [Leishmania major]
 gi|378943056|gb|AFC76269.1| cathepsin L-like protease [Leishmania major]
 gi|394331745|gb|AFN27095.1| cysteine protease [Leishmania major]
          Length = 348

 Score =  214 bits (546), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 128/312 (41%), Positives = 173/312 (55%), Gaps = 32/312 (10%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           F  FK  + + Y T  E   R   F+ NL   +  Q  +P A  G+TKF DL+ +EF  +
Sbjct: 38  FEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 113 FLGLNRRLRLPADAQKA------PILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSA 166
           +L  N      A  Q A           + +P   DWR+ GAVT VK+QGACGSCW+FSA
Sbjct: 98  YL--NGAAYFAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSCWAFSA 155

Query: 167 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK--AG 224
            G +E    ++  +LV LSEQQLV CDH          D+GC GGLM  AFE++L+   G
Sbjct: 156 VGNIESQWAVAGHKLVRLSEQQLVSCDH---------VDNGCGGGLMLQAFEWVLRNMNG 206

Query: 225 GVEREKDYPYTGTDGG--SCKFDKSKIA--AAVSNFSVISSDEDQMAANLVKHGPLAVGI 280
            V  EK YPY   +G    C  + S++A  A +  +  + S E  MAA L K+GP+++ +
Sbjct: 207 TVFTEKSYPYVSGNGDVPECS-NSSELAPGARIDGYVSMESSERVMAAWLAKNGPISIAV 265

Query: 281 NAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGEN 340
           +A    +Y  GV    I G+ L+HGVL+VGY  +G       E PYW+IKNSWGE+WGE 
Sbjct: 266 DASSFMSYHSGVLTSCI-GEQLNHGVLLVGYNMTG-------EVPYWVIKNSWGEDWGEK 317

Query: 341 GYYKICMGRNVC 352
           GY ++ MG N C
Sbjct: 318 GYVRVTMGVNAC 329


>gi|394331739|gb|AFN27092.1| cysteine protease [Leishmania major]
          Length = 348

 Score =  214 bits (546), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 128/312 (41%), Positives = 173/312 (55%), Gaps = 32/312 (10%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           F  FK  + + Y T  E   R   F+ NL   +  Q  +P A  G+TKF DL+ +EF  +
Sbjct: 38  FEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 113 FLGLNRRLRLPADAQKA------PILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSA 166
           +L  N      A  Q A           + +P   DWR+ GAVT VK+QGACGSCW+FSA
Sbjct: 98  YL--NGAAYFAAAKQHAGQHCRKARADLSAVPDAVDWREKGAVTPVKNQGACGSCWAFSA 155

Query: 167 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK--AG 224
            G +E    ++  +LV LSEQQLV CDH          D+GC GGLM  AFE++L+   G
Sbjct: 156 VGNIESQWAVAGHKLVRLSEQQLVSCDH---------VDNGCGGGLMLQAFEWVLRNMNG 206

Query: 225 GVEREKDYPYTGTDGG--SCKFDKSKIA--AAVSNFSVISSDEDQMAANLVKHGPLAVGI 280
            V  EK YPY   +G    C  + S++A  A +  +  + S E  MAA L K+GP+++ +
Sbjct: 207 TVFTEKSYPYVSGNGDVPECS-NSSELAPGARIDGYVSMESSERVMAAWLAKNGPISIAV 265

Query: 281 NAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGEN 340
           +A    +Y  GV    I G+ L+HGVL+VGY  +G       E PYW+IKNSWGE+WGE 
Sbjct: 266 DASSFMSYHSGVLTSCI-GEQLNHGVLLVGYNMTG-------EVPYWVIKNSWGEDWGEK 317

Query: 341 GYYKICMGRNVC 352
           GY ++ MG N C
Sbjct: 318 GYVRVTMGVNAC 329


>gi|577617|gb|AAC37213.1| cysteine proteinase [Trypanosoma cruzi]
          Length = 467

 Score =  214 bits (546), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 135/368 (36%), Positives = 183/368 (49%), Gaps = 53/368 (14%)

Query: 4   LILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKT 63
           L L+++L+++   V A+  +++ ++ +  Q                   F+ FK K  + 
Sbjct: 8   LSLAAVLVVMACLVPAATASLHAEETLASQ-------------------FAEFKQKHGRV 48

Query: 64  YATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ-------FLGL 116
           Y +  E  +R  VF+ANL  A+     +P A  GVT FSDLT  EFR +       F   
Sbjct: 49  YGSAAEEAFRLSVFRANLFLARLHAAANPHATFGVTPFSDLTREEFRSRYHNGAAHFAAA 108

Query: 117 NRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFL 176
             R R+P D +          P   DWR+ GAVT VK+QG CGSCW+F+A G +EG  FL
Sbjct: 109 EERARVPVDVEVV------GAPAAKDWREEGAVTAVKNQGICGSCWAFAAIGNIEGQWFL 162

Query: 177 STGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA--GGVEREKDYPY 234
           +   L  LSEQ LV CD+          +SGC GGL + AFE+I++   G V  E  YPY
Sbjct: 163 AGNPLTRLSEQMLVSCDNT---------NSGCGGGLSSKAFEWIVQENNGAVYTEDSYPY 213

Query: 235 TGTDGGS--CKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGV 292
               G    CK     + A ++    +  DE Q+AA+    GPL+V ++A     Y GGV
Sbjct: 214 HSCIGIKLPCKDSDRTVGATITGHVELPQDEAQIAASGAVKGPLSVAVDASSWFFYTGGV 273

Query: 293 SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVC 352
               +  K L H VL+VGY  S          PYWIIKNSW  +WGE GY +I  G N C
Sbjct: 274 LTNCV-SKRLSHAVLLVGYNDSAAV-------PYWIIKNSWTTHWGEGGYIRIAKGSNQC 325

Query: 353 GVDSMVSS 360
            V   VSS
Sbjct: 326 LVKEEVSS 333


>gi|194883222|ref|XP_001975702.1| GG20414 [Drosophila erecta]
 gi|190658889|gb|EDV56102.1| GG20414 [Drosophila erecta]
          Length = 341

 Score =  214 bits (546), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 136/320 (42%), Positives = 175/320 (54%), Gaps = 30/320 (9%)

Query: 56  FKSKFSKTYATQEEHDYRFRVFKANLRR-AKRRQLLDPTAVH---GVTKFSDLTPSEFRR 111
           FK +  K Y    E  +R ++F  N  + AK  Q      V     V K++DL   EFR+
Sbjct: 32  FKLEHRKNYQDDTEERFRLKIFNENKHKIAKHNQRYAEGKVSFKLAVNKYADLLHHEFRQ 91

Query: 112 QFLGLN----RRLRLPADAQKAP--ILPTN-DLPTDFDWRDHGAVTGVKDQGACGSCWSF 164
              G N    ++LR   D+ K    I P +  LP   DWR  GAVT VKDQG CGSCW+F
Sbjct: 92  LMNGFNYTLHKQLRSTDDSFKGVTFISPAHVTLPKSVDWRTKGAVTAVKDQGHCGSCWAF 151

Query: 165 SATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAG 224
           S+TGALEG HF  +G LVSLSEQ LVDC        +   ++GCNGGLM++AF YI   G
Sbjct: 152 SSTGALEGQHFRKSGVLVSLSEQNLVDC-------STKYGNNGCNGGLMDNAFRYIKDNG 204

Query: 225 GVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVI-SSDEDQMAANLVKHGPLAVGINAV 283
           G++ EK YPY   D  SC F+K  I A    F+ I   DE +MA  +   GP+AV I+A 
Sbjct: 205 GIDTEKSYPYEAID-DSCHFNKGAIGATDRGFTDIPQGDEKKMAEAVATVGPVAVAIDAS 263

Query: 284 W--MQTYIGGV-SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGEN 340
               Q Y  GV + P    + LDHGVL+VGYG+            YW++KNSWG  WG+ 
Sbjct: 264 HESFQFYSEGVYNEPQCDAQNLDHGVLVVGYGTDESGD------DYWLVKNSWGTTWGDK 317

Query: 341 GYYKICMGR-NVCGVDSMVS 359
           G+ K+   + N CG+ S  S
Sbjct: 318 GFIKMLRNKDNQCGIASASS 337


>gi|15824691|gb|AAL09443.1| cysteine protease [Leishmania donovani]
          Length = 443

 Score =  214 bits (546), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 130/313 (41%), Positives = 174/313 (55%), Gaps = 34/313 (10%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           F  FK  + + Y T  E   R   F+ NL   +  Q  +P A  G+TKF DL+ +EF  +
Sbjct: 38  FEEFKRTYRRAYGTLAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 113 FLGLNRRLRLPADAQKA------PILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSA 166
           +L  N      A  Q A           + +P   DWR+ GAVT VK+QGACGSCW+FSA
Sbjct: 98  YL--NGAAYFAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSCWAFSA 155

Query: 167 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK--AG 224
            G +E         LVSLSEQQLV CD +         D+GCNGGLM  AFE++L+   G
Sbjct: 156 VGNIESQWARVGHGLVSLSEQQLVSCDDK---------DNGCNGGLMLQAFEWLLRHMYG 206

Query: 225 GVEREKDYPYTGTDGGSCK-FDKSKI--AAAVSNFSVISSDEDQMAANLVKHGPLAVGIN 281
            V  EK YPYT  +G   +  + SK+   A +  + +I S+E  MAA L ++GP+A+ ++
Sbjct: 207 IVFTEKSYPYTSGNGDVAECLNSSKLVPGAQIDGYVMIPSNETVMAAWLAENGPIAIAVD 266

Query: 282 AVWMQTYIGGV--SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGE 339
           A    +Y  GV  SC    G  L+HGVL+VGY  +G         PYW+IKNSWGE+WGE
Sbjct: 267 ASSFMSYQSGVLTSC---AGDALNHGVLLVGYNKTGGV-------PYWVIKNSWGEDWGE 316

Query: 340 NGYYKICMGRNVC 352
            GY ++ MG+N C
Sbjct: 317 KGYVRVAMGKNAC 329


>gi|157864845|ref|XP_001681131.1| cathepsin L-like protease [Leishmania major strain Friedlin]
 gi|68124425|emb|CAJ02281.1| cathepsin L-like protease [Leishmania major strain Friedlin]
          Length = 348

 Score =  214 bits (546), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 127/312 (40%), Positives = 172/312 (55%), Gaps = 32/312 (10%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           F  FK  + + Y T  E   R   F+ NL   +  Q  +P A  G+TKF DL+ +EF  +
Sbjct: 38  FEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 113 FLGLNRRLRLPADAQKA------PILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSA 166
           +L  N      A  Q A           + +P   DWR+ GAVT VK+QGACGSCW+FSA
Sbjct: 98  YL--NGAAYFAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSCWAFSA 155

Query: 167 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK--AG 224
            G +E    ++  +LV LSEQQLV CDH          D+GC GGLM  AFE++L+   G
Sbjct: 156 VGNIESQWAVAGHKLVRLSEQQLVSCDH---------VDNGCGGGLMLQAFEWVLRNMNG 206

Query: 225 GVEREKDYPYTGTDGG--SCKFDKSKIA--AAVSNFSVISSDEDQMAANLVKHGPLAVGI 280
            V  EK YPY   +G    C  + S++A  A +  +  + S E  M A L K+GP+++ +
Sbjct: 207 TVSTEKSYPYVSGNGDVPECS-NSSELAPGARIDGYVSMESSERVMTAWLAKNGPISIAV 265

Query: 281 NAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGEN 340
           +A    +Y  GV    I G+ L+HGVL+VGY  +G       E PYW+IKNSWGE+WGE 
Sbjct: 266 DASSFMSYHSGVLTSCI-GEQLNHGVLLVGYNMTG-------EVPYWVIKNSWGEDWGEK 317

Query: 341 GYYKICMGRNVC 352
           GY ++ MG N C
Sbjct: 318 GYVRVTMGVNAC 329


>gi|1581746|prf||2117247B Cys protease:ISOTYPE=2
          Length = 467

 Score =  214 bits (546), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 125/316 (39%), Positives = 163/316 (51%), Gaps = 24/316 (7%)

Query: 52  HFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRR 111
            F+ FK +  K Y +  E  +R  VFK NL  A+     +P A  GVT FSDLT  EFR 
Sbjct: 37  QFAAFKQRHGKVYGSAAEEAFRLGVFKENLLFARLHAAANPHASFGVTPFSDLTREEFRS 96

Query: 112 QF---LGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATG 168
           ++          +          +     P   DWR  GAVT +KDQG CGSCW+FS  G
Sbjct: 97  RYHNAAAHFAAAQKRVRVPVEVEVEVGGAPAAVDWRARGAVTAIKDQGGCGSCWAFSTIG 156

Query: 169 ALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYIL--KAGGV 226
            +EG   L+   L  LSEQ LV CD+          D+GC+GGLM+SAF++I+    G V
Sbjct: 157 NIEGQWHLAGNPLTGLSEQMLVSCDNA---------DNGCDGGLMDSAFDWIVGQNNGSV 207

Query: 227 EREKDYPYT--GTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW 284
             E  Y Y   G D  +C      + A +S    +  DED+MAA L  +GPLA+ ++A  
Sbjct: 208 YTEASYSYVSGGGDSQTCNMSSHVVGAVISGHVDLPQDEDKMAAWLAVNGPLAIAVDATS 267

Query: 285 MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYK 344
             +Y GGV    +  + LDHGV++VGY  S          PYWIIKNSWG +WGE GY +
Sbjct: 268 FMSYTGGVLTNCVSDQ-LDHGVVLVGYNDS-------SNPPYWIIKNSWGADWGEEGYIR 319

Query: 345 ICMGRNVCGVDSMVSS 360
           I  G N C V +   S
Sbjct: 320 IQKGTNQCLVKNYACS 335


>gi|344271892|ref|XP_003407771.1| PREDICTED: cathepsin L1-like [Loxodonta africana]
          Length = 334

 Score =  214 bits (546), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 126/326 (38%), Positives = 173/326 (53%), Gaps = 21/326 (6%)

Query: 42  SEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVT-- 99
           ++ H  + +  +  +KS + K YA  EE D+R  V++ N++  +R         HG T  
Sbjct: 18  AQKHDESLDEQWYQWKSLYKKPYAANEE-DWRRAVWEKNMKMIERHNQEYSQGKHGFTMT 76

Query: 100 --KFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGA 157
              F D+T  EFR+   G   + R+       P+     +P   DW   G VT VKDQG 
Sbjct: 77  MNAFGDMTNEEFRQVMNGFQNQKRIQGKLLYEPVF--GHIPKSVDWTQKGYVTPVKDQGQ 134

Query: 158 CGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAF 217
           CGSCW+FSATGALEG  F  TG+LVSLSEQ LVDC            + GCNGGLM++AF
Sbjct: 135 CGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRR-------EGNEGCNGGLMDNAF 187

Query: 218 EYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLA 277
           +YI   GG++ E+ YPYT  D   C+++    AA  + F  I   E  +   +   GP++
Sbjct: 188 QYIKDNGGLDSEESYPYTAMDKQDCRYNPKYSAANDTGFVDIPPQEKALMKAVATVGPIS 247

Query: 278 VGINA--VWMQTYIGGVSCPYIC-GKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWG 334
           V ++A     Q Y  G+     C  K L+HGVL+VGY   GF  I      YW++KNSWG
Sbjct: 248 VAVDAGHESFQFYKSGIYYDSNCSSKDLNHGVLVVGY---GFEGIDSANNRYWLVKNSWG 304

Query: 335 ENWGENGYYKICMGRNV-CGVDSMVS 359
             WG +GY K+   RN  CG+ +  S
Sbjct: 305 TGWGTDGYIKMAKDRNNHCGIATAAS 330


>gi|225444726|ref|XP_002278624.1| PREDICTED: thiol protease aleurain-like isoform 1 [Vitis vinifera]
 gi|147826441|emb|CAN62278.1| hypothetical protein VITISV_031382 [Vitis vinifera]
 gi|297738562|emb|CBI27807.3| unnamed protein product [Vitis vinifera]
          Length = 362

 Score =  214 bits (546), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 148/377 (39%), Positives = 208/377 (55%), Gaps = 48/377 (12%)

Query: 1   MERLILSSLLLLLLSSVLASAV-----AVNDDDAMIRQVVPS--DGEQSEDHLLNAEHH- 52
           M RL + + +L+LL +V +        +  D++  IR V  S  D E S   L+    H 
Sbjct: 1   MARLSVVAAVLILLCAVASGEADHHFRSSFDEENPIRLVSDSIRDLESSVLRLIGDTRHA 60

Query: 53  --FSLFKSKFSKTYATQEEHDYRFRVFKANLR--RAKRRQLLDPTAVHGVTKFSDLTPSE 108
             F+ F  ++ K+Y T +E   RF +F  NL+  R+  R+ L  T    V +F+D T  E
Sbjct: 61  HSFASFAHRYGKSYKTVDEIKLRFEIFSENLKLIRSTNRKGLPYTL--AVNQFADWTWEE 118

Query: 109 FRRQFLGL--NRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSA 166
           FRR  LG   N    L  + +   ++    LP   DWR+ G V+ +KDQG CGSCW+FS 
Sbjct: 119 FRRHRLGAAQNCSATLKGNHKLTDVI----LPETKDWREDGIVSPIKDQGHCGSCWTFST 174

Query: 167 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDS-GCNGGLMNSAFEYILKAGG 225
           TGALE A+  + G+ +SLSEQQLVDC        +G+ ++ GC+GGL + AFEYI   GG
Sbjct: 175 TGALEAAYAQAFGKGISLSEQQLVDC--------AGAFNNFGCHGGLPSQAFEYIKYNGG 226

Query: 226 VEREKDYPYTGTDGGSCKFDKSKIAAAV---SNFSVISSDEDQMAANLVKHGPLAVGINA 282
           ++ E+ YPYTG D G+CKF    I   V    N ++ + DE + A   V+  P++V    
Sbjct: 227 LDTEEAYPYTGLD-GTCKFSSENIGVQVLDSVNITLGAEDELKHAVAFVR--PVSVAFEV 283

Query: 283 VW-MQTYIGGVSCPYICGKY---LDHGVLIVGYG-SSGFAPIRFKEKPYWIIKNSWGENW 337
           V   + Y  GV     CG     ++H VL VGYG   G A        YW+IKNSWGENW
Sbjct: 284 VHDFRFYKKGVYTSGTCGSTPMDVNHAVLAVGYGVEDGVA--------YWLIKNSWGENW 335

Query: 338 GENGYYKICMGRNVCGV 354
           G+NGY+K+ +G+N+CGV
Sbjct: 336 GDNGYFKMELGKNMCGV 352


>gi|171702831|dbj|BAG16371.1| cysteine protease [Brassica oleracea var. italica]
          Length = 441

 Score =  214 bits (545), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 116/295 (39%), Positives = 167/295 (56%), Gaps = 20/295 (6%)

Query: 59  KFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNR 118
           K  K   +  E D RF +FK NLR        + +   G+TKF+DLT  E+R  +LG   
Sbjct: 48  KHGKAQNSLTEKDRRFEIFKDNLRFIDEHNGKNLSYRLGLTKFADLTNDEYRSMYLGSRL 107

Query: 119 RLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLST 178
           + +    + +  +   + +P   DWR  GAV  VKDQG+CGSCW+FS  GA+EG + + T
Sbjct: 108 KRKATKSSLRYEVRVGDAIPESVDWRKEGAVAEVKDQGSCGSCWAFSTIGAVEGINKIVT 167

Query: 179 GELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTD 238
           G+L++LSEQ+LVDCD         S + GCNGGLM+ AFE+I+  GG++ E+DYPY G D
Sbjct: 168 GDLITLSEQELVDCDT--------SYNEGCNGGLMDYAFEFIINNGGIDTEEDYPYKGVD 219

Query: 239 GGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGIN--AVWMQTYIGGVSCPY 296
           G   +  K+     +  +  + ++ ++     + H P++V I       Q Y  G+    
Sbjct: 220 GRCDQTRKNAKVVTIDLYEDVPANSEESLKKALSHQPISVAIEGGGRAFQLYDSGIF-DG 278

Query: 297 ICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNV 351
           ICG  LDHGV+ VGYG+          K YWI+KNSWG +WGE+GY +  M RN+
Sbjct: 279 ICGTDLDHGVVAVGYGTE-------NGKDYWIVKNSWGTSWGESGYIR--MERNI 324


>gi|261289779|ref|XP_002611751.1| hypothetical protein BRAFLDRAFT_284345 [Branchiostoma floridae]
 gi|229297123|gb|EEN67761.1| hypothetical protein BRAFLDRAFT_284345 [Branchiostoma floridae]
          Length = 330

 Score =  214 bits (545), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 130/322 (40%), Positives = 174/322 (54%), Gaps = 32/322 (9%)

Query: 47  LNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH----GVTKFS 102
           L+ E  +  FK K  K Y+ +EE+  R  +F+ NL+  +       T  H    GV +F+
Sbjct: 18  LSFESQWEAFKIKHDKVYSEKEEYARRL-IFQDNLKTIESHNQEADTGKHSYWLGVNQFA 76

Query: 103 DLTPSEFRRQFLG---LNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACG 159
           D+T +E+  Q +G   +   L           +P   +    DWRD G VT +KDQG CG
Sbjct: 77  DMTHAEYLNQVIGGCLITSNLTKTGSRATYRYMPNMQVNDTVDWRDKGLVTDIKDQGQCG 136

Query: 160 SCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEY 219
           SCW+FS TG+LEG H  +TG LVSLSEQ LVDC  +         + GC GG M+  F+Y
Sbjct: 137 SCWAFSTTGSLEGQHAKATGTLVSLSEQNLVDCSRQ-------EGNKGCEGGDMDQGFQY 189

Query: 220 ILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFS-VISSDEDQMAANLVKHGPLAV 278
           I++  G++ E+ YPY   +   CKFD S I A +S+F+ V S DED +       GP++V
Sbjct: 190 IIQNKGIDTEQCYPYKAKN-HRCKFDNSCIGATMSSFTDVTSGDEDALKQACANIGPISV 248

Query: 279 GINAVW--MQTYIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGE 335
           GI+A     Q Y  GV   + C    LDHGVL+VGYG+ G        K YW++KNSWG 
Sbjct: 249 GIDASHQSFQFYSSGVYNEFECSSTKLDHGVLVVGYGTYG-------SKDYWLVKNSWGT 301

Query: 336 NWGENGYYKICMGR---NVCGV 354
            WG  GY  I M R   N CGV
Sbjct: 302 VWGNEGY--IMMSRNKDNQCGV 321


>gi|119964630|ref|YP_950826.1| cathepsin [Maruca vitrata MNPV]
 gi|119514473|gb|ABL76048.1| cathepsin [Maruca vitrata MNPV]
          Length = 324

 Score =  214 bits (545), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 118/325 (36%), Positives = 180/325 (55%), Gaps = 28/325 (8%)

Query: 46  LLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLT 105
           LL A ++F  F  +F+K Y ++ E   RF++F+ NL     +   D  A + + KFSDL+
Sbjct: 21  LLKAPNYFEEFVLQFNKNYGSEIEKLRRFKIFQHNLNEIINKNQNDSAAKYEINKFSDLS 80

Query: 106 PSEFRRQFLGLNRRLRLPADAQ---KAPIL--PTNDLPTDFDWRDHGAVTGVKDQGACGS 160
             E   ++ GL+    LP   Q   K  +L  P    P +FDWR    VT VK+QG CG+
Sbjct: 81  KDETIAKYTGLS----LPIQTQNFCKVIVLDQPPGKGPFEFDWRRLNKVTNVKNQGVCGA 136

Query: 161 CWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYI 220
           CW+F+A  +LE    +   +L+ LSEQQ++DCD         S D+GCNGGL+++AFE +
Sbjct: 137 CWAFAALASLESQFAMKHNQLIDLSEQQMIDCD---------SVDAGCNGGLLHTAFEAV 187

Query: 221 LKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVG 279
           +K GGV+ EKDYPY   +  +C+ + +K    V + +  I   E+++   L   GP+ + 
Sbjct: 188 IKMGGVQLEKDYPYEAAN-NNCRMNSNKFLVKVKDCYRYIIVYEEKLKDLLRSVGPIPMA 246

Query: 280 INAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGE 339
           I+A  +  Y  G+   Y     L+H VL+VGYG            PYW  KN+WG +WGE
Sbjct: 247 IDAADIVNYKQGI-IKYCLNSGLNHAVLLVGYGVEN-------NIPYWTFKNTWGTDWGE 298

Query: 340 NGYYKICMGRNVCGVDSMVSSVAAI 364
           +GY+++    N CG+ + ++S A I
Sbjct: 299 SGYFRLQQNINACGMRNELASTAVI 323


>gi|343477446|emb|CCD11725.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 361

 Score =  214 bits (545), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 122/316 (38%), Positives = 168/316 (53%), Gaps = 22/316 (6%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEF 109
           +  F+ FK K+S++Y    E  +RFRVFK N+ RAK     +P A  GVT+FSD++P EF
Sbjct: 38  QQQFAAFKQKYSRSYRDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSPEEF 97

Query: 110 RRQFL-GLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATG 168
           R  +  G           +K   + T   P   DWR  GAVT VKDQG C S W+F+  G
Sbjct: 98  RATYHNGAEYYAAALKRPRKVVNVSTGKAPEAVDWRKKGAVTPVKDQGKCDSSWAFTVIG 157

Query: 169 ALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA--GGV 226
            +EG   ++  EL SLSEQ LV CD         + D GC  G M++AF++I+    G V
Sbjct: 158 NIEGQWKIAGHELTSLSEQMLVSCD---------TNDLGCRAGFMDTAFKWIVSPNDGNV 208

Query: 227 EREKDYPYTGTDGG--SCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW 284
             E+ YPY    G   +C      + A + +   I  +E+ +A  L K+GP+A+ ++A  
Sbjct: 209 FTEQSYPYASGGGNVPACNKSGKVVGANIDDHVHILDNENAIAEWLAKNGPVAIAVDATS 268

Query: 285 MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYK 344
            Q Y GGV    I  K ++   L+VGY  +        + PYWIIKNSWG+ WGE GY +
Sbjct: 269 FQRYTGGVLTSCI-SKEVNSAALLVGYDDT-------SKPPYWIIKNSWGKGWGEEGYIR 320

Query: 345 ICMGRNVCGVDSMVSS 360
           I  G N C +   VSS
Sbjct: 321 IEKGTNQCRMKDYVSS 336


>gi|340381055|ref|XP_003389037.1| PREDICTED: cathepsin L1-like [Amphimedon queenslandica]
          Length = 329

 Score =  214 bits (545), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 125/319 (39%), Positives = 180/319 (56%), Gaps = 26/319 (8%)

Query: 52  HFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTA-------VHGVTKFSDL 104
            + L+K    K Y++++E  YR  +++AN     ++ +L+  A          +  F+DL
Sbjct: 22  EWELWKRTNGKDYSSEKEELYRQTIWEAN-----KKIVLEHNANADKWGWTLEMNAFADL 76

Query: 105 TPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSF 164
             SEF   + G  R  R  ++A +  +   N LP   DWR  GAVT VK+Q  CGSCW+F
Sbjct: 77  ESSEFAAMYNGYRRSAR-KSNATRYHVPTGNALPDTVDWRTKGAVTPVKNQKQCGSCWAF 135

Query: 165 SATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAG 224
           S TG+LEG  FL  G L SLSEQQLVDC  +         + GC GGLM++AF+YI   G
Sbjct: 136 STTGSLEGQTFLKKGTLPSLSEQQLVDCSDKYG-------NHGCQGGLMDNAFKYIEANG 188

Query: 225 GVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDE-DQMAANLVKHGPLAVGINAV 283
           G++ E  YPY   + G C+F +S +AA  + +  I  D+ D +   +   GP++V ++A 
Sbjct: 189 GIDSEASYPYEAKN-GKCRFQQSAVAATCTGYKDIPHDDIDGLQDAVANVGPISVAMDAS 247

Query: 284 W--MQTYIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGEN 340
               Q Y  GV  P +C    LDHGVL VGYG+   + +  +EKPYW++KNSWG +WG+ 
Sbjct: 248 HSSFQLYAAGVYDPLLCSSTRLDHGVLAVGYGTEP-SGLFHEEKPYWLVKNSWGPDWGQQ 306

Query: 341 GYYKICMGRNVCGVDSMVS 359
           GY+KI    N CG+ +  S
Sbjct: 307 GYFKIVRKDNKCGIATDAS 325


>gi|79314271|ref|NP_001030812.1| thiol protease aleurain-like protein [Arabidopsis thaliana]
 gi|332644501|gb|AEE78022.1| thiol protease aleurain-like protein [Arabidopsis thaliana]
          Length = 357

 Score =  214 bits (545), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 140/363 (38%), Positives = 198/363 (54%), Gaps = 33/363 (9%)

Query: 3   RLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPS--DGEQSEDHLLNAEHH---FSLFK 57
           +L LSS +LL+L +  AS     D+   I+ V  +  + E +   +L    H   FS F 
Sbjct: 4   KLNLSSSILLILFAAAASKEIGFDESNPIKMVSDNLHELEDTVVQILGQSRHVLSFSRFT 63

Query: 58  SKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLN 117
            ++ K Y + EE   RF VFK NL   +       +    + +F+DLT  EF+R  LG  
Sbjct: 64  HRYGKKYQSVEEMKLRFSVFKENLDLIRSTNKKGLSYKLSLNQFADLTWQEFQRYKLGAA 123

Query: 118 RRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLS 177
           +     A  + +  +    +P   DWR+ G V+ VK+QG CGSCW+FS TGALE A+  +
Sbjct: 124 QNC--SATLKGSHKITEATVPDTKDWREDGIVSPVKEQGHCGSCWTFSTTGALEAAYHQA 181

Query: 178 TGELVSLSEQQLVDCDHECDPEESGSCDS-GCNGGLMNSAFEYILKAGGVEREKDYPYTG 236
            G+ +SLSEQQLVDC        +G+ ++ GC+GGL + AFEYI   GG++ E+ YPYTG
Sbjct: 182 FGKGISLSEQQLVDC--------AGTFNNFGCHGGLPSQAFEYIKYNGGLDTEEAYPYTG 233

Query: 237 TDGGSCKFDKSKIAAAVS---NFSVISSDEDQMAANLVKHGPLAVGINAVW-MQTYIGGV 292
            DGG CKF    I   V    N ++ + DE + A  LV+  P++V    V   + Y  GV
Sbjct: 234 KDGG-CKFSAKNIGVQVRDSVNITLGAEDELKHAVGLVR--PVSVAFEVVHEFRFYKKGV 290

Query: 293 SCPYICGKY---LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR 349
                CG     ++H VL VGYG          + PYW+IKNSWG  WG+NGY+K+ MG+
Sbjct: 291 FTSNTCGNTPMDVNHAVLAVGYGVE-------DDVPYWLIKNSWGGEWGDNGYFKMEMGK 343

Query: 350 NVC 352
           N+C
Sbjct: 344 NMC 346


>gi|343473977|emb|CCD14279.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 361

 Score =  214 bits (545), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 122/316 (38%), Positives = 168/316 (53%), Gaps = 22/316 (6%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEF 109
           +  F+ FK K+S++Y    E  +RFRVFK N+ RAK     +P A  GVT+FSD++P EF
Sbjct: 38  QQQFAAFKQKYSRSYRDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSPEEF 97

Query: 110 RRQFL-GLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATG 168
           R  +  G           +K   + T   P   DWR  GAVT VKDQG C S W+F+  G
Sbjct: 98  RATYHNGAEYYAAALKRPRKVVNVSTGKAPEAVDWRKKGAVTPVKDQGKCDSSWAFTVIG 157

Query: 169 ALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA--GGV 226
            +EG   ++  EL SLSEQ LV CD         + D GC  G M++AF++I+    G V
Sbjct: 158 NIEGQWKIAGHELTSLSEQMLVSCD---------TNDLGCRAGFMDTAFKWIVSPNDGNV 208

Query: 227 EREKDYPYTGTDGG--SCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW 284
             E+ YPY    G   +C      + A + +   I  +E+ +A  L K+GP+A+ ++A  
Sbjct: 209 FTEQSYPYASGGGNVPACNKSGKVVGANIRDHVHILDNENAIAEWLAKNGPVAIAVDATS 268

Query: 285 MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYK 344
            Q Y GGV    I  K ++   L+VGY  +        + PYWIIKNSWG+ WGE GY +
Sbjct: 269 FQRYTGGVLTSCI-SKEVNSAALLVGYDDT-------SKPPYWIIKNSWGKGWGEEGYIR 320

Query: 345 ICMGRNVCGVDSMVSS 360
           I  G N C +   VSS
Sbjct: 321 IEKGTNQCRMKDYVSS 336


>gi|71482942|gb|AAZ32410.1| cysteine proteinase aleuran type [Nicotiana benthamiana]
          Length = 360

 Score =  214 bits (545), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 135/348 (38%), Positives = 191/348 (54%), Gaps = 36/348 (10%)

Query: 27  DDAMIRQVVPSDGEQSEDHLLNA---EHH---FSLFKSKFSKTYATQEEHDYRFRVFKAN 80
           D+  IRQ+V     + E+ +L       H   F+ F  ++ K Y T EE   RF VF  N
Sbjct: 29  DENPIRQIVSDGLHELENGILQVVGKTRHALLFARFAHRYGKRYETVEEIKQRFEVFLDN 88

Query: 81  LRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTND-LPT 139
           L+  +       +   GV +F+D+T  EFRR  LG  +     +   K  +  TN  LP 
Sbjct: 89  LKMIRSHNKKGLSYKLGVNEFTDITWDEFRRDRLGAAQNC---SATTKGNLKLTNVVLPE 145

Query: 140 DFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPE 199
             DWR+ G V+ VK+QG CGSCW+FS TGALE A+  + G+ +SLSEQQLVDC       
Sbjct: 146 TKDWREAGIVSPVKNQGKCGSCWTFSTTGALEAAYGQAFGKGISLSEQQLVDC------- 198

Query: 200 ESGSCDS-GCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAV---SN 255
            +G+ ++ GCNGGL + AFEYI   GG++ E+ YPYTG + G CKF    +   V    N
Sbjct: 199 -AGAFNNFGCNGGLPSQAFEYIKSNGGLDTEEAYPYTGKN-GLCKFSSENVGVKVIDSVN 256

Query: 256 FSVISSDEDQMAANLVKHGPLAVGINAV-WMQTYIGGVSCPYICGKY---LDHGVLIVGY 311
            ++ + DE + A  LV+  P+++    +   + Y  GV     CG     ++H VL VGY
Sbjct: 257 ITLGAEDELKYAVALVR--PVSIAFEVIKGFKQYKSGVYTSTECGNTPMDVNHAVLAVGY 314

Query: 312 GSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVS 359
           G            PYW+IKNSWG +WG+NGY+K+ MG+N+CG+ +  S
Sbjct: 315 GVENGV-------PYWLIKNSWGADWGDNGYFKMEMGKNMCGIATCAS 355


>gi|151176971|gb|ABR88030.1| digestive cysteine protease [Dermestes frischii]
          Length = 339

 Score =  214 bits (545), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 131/326 (40%), Positives = 176/326 (53%), Gaps = 30/326 (9%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRR-AKRRQLLDPTAVH---GVTKFSDLT 105
           +  +  FK +  K Y +  E  +R ++F  N  + AK  +L +   V     + K++D+ 
Sbjct: 24  QEQWGTFKLQHKKQYKSDTEEKFRMKIFMENSHKVAKXNKLYEMGLVSYKLKINKYADML 83

Query: 106 PSEFRRQFLGLNRRLRLP-----ADAQKAP-ILPTN-DLPTDFDWRDHGAVTGVKDQGAC 158
             EF     G NR    P      D Q A  I P N   P + DWR+HGAVT VKDQG C
Sbjct: 84  HHEFVHTVNGFNRTKNTPLLGTSEDEQGATFIAPANVKFPENVDWREHGAVTXVKDQGHC 143

Query: 159 GSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFE 218
           GSCWSFSATGALEG HF  T +LVSLSEQ LVDC        +   + GCNGGLM++AF+
Sbjct: 144 GSCWSFSATGALEGQHFRKTNKLVSLSEQNLVDC-------STKFGNDGCNGGLMDNAFK 196

Query: 219 YILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLA 277
           Y+    G++ E  YPY   D   C ++     A    F  + + DE+++ A +   GP++
Sbjct: 197 YVKYNHGIDTEASYPYHADD-EKCHYNPKTSGATDRGFVDIPTGDEEKLMAAVATVGPVS 255

Query: 278 VGINAVW--MQTYIGGVSC-PYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWG 334
           V I+A     Q Y  GV   P    + LDHGVL+VGYG+          + YWI+KNSWG
Sbjct: 256 VAIDASHESFQLYSEGVYYDPECSSEELDHGVLVVGYGTDE------NGQDYWIVKNSWG 309

Query: 335 ENWGENGYYKICMGR-NVCGVDSMVS 359
           E+WGE GY K+   R N CG+ +  S
Sbjct: 310 ESWGEQGYIKMARNRDNNCGIATQAS 335


>gi|157864853|ref|XP_001681135.1| cathepsin L-like protease [Leishmania major strain Friedlin]
 gi|157864857|ref|XP_001681137.1| cathepsin L-like protease [Leishmania major strain Friedlin]
 gi|68124429|emb|CAJ02285.1| cathepsin L-like protease [Leishmania major strain Friedlin]
 gi|68124431|emb|CAJ02287.1| cathepsin L-like protease [Leishmania major strain Friedlin]
          Length = 443

 Score =  214 bits (545), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 128/312 (41%), Positives = 173/312 (55%), Gaps = 32/312 (10%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           F  FK  + + Y T  E   R   F+ NL   +  Q  +P A  G+TKF DL+ +EF  +
Sbjct: 38  FEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 113 FLGLNRRLRLPADAQKA------PILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSA 166
           +L  N      A  Q A           + +P   DWR+ GAVT VK+QGACGSCW+FSA
Sbjct: 98  YL--NGAAYFAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSCWAFSA 155

Query: 167 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK--AG 224
            G +E    ++  +LV LSEQQLV CDH          D+GC GGLM  AFE++L+   G
Sbjct: 156 VGNIESQWAVAGHKLVRLSEQQLVSCDH---------VDNGCGGGLMLQAFEWVLRNMNG 206

Query: 225 GVEREKDYPYTGTDGG--SCKFDKSKIA--AAVSNFSVISSDEDQMAANLVKHGPLAVGI 280
            V  EK YPY   +G    C  + S++A  A +  +  + S E  MAA L K+GP+++ +
Sbjct: 207 TVFTEKSYPYVSGNGDVPECS-NSSELAPGARIDGYVSMESSERVMAAWLAKNGPISIAV 265

Query: 281 NAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGEN 340
           +A    +Y  GV    I G+ L+HGVL+VGY  +G       E PYW+IKNSWGE+WGE 
Sbjct: 266 DASSFMSYHSGVLTSCI-GEQLNHGVLLVGYNMTG-------EVPYWVIKNSWGEDWGEK 317

Query: 341 GYYKICMGRNVC 352
           GY ++ MG N C
Sbjct: 318 GYVRVTMGVNAC 329


>gi|6967097|emb|CAB72480.1| cysteine protease-like protein [Arabidopsis thaliana]
          Length = 377

 Score =  214 bits (545), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 140/363 (38%), Positives = 198/363 (54%), Gaps = 33/363 (9%)

Query: 3   RLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPS--DGEQSEDHLLNAEHH---FSLFK 57
           +L LSS +LL+L +  AS     D+   I+ V  +  + E +   +L    H   FS F 
Sbjct: 4   KLNLSSSILLILFAAAASKEIGFDESNPIKMVSDNLHELEDTVVQILGQSRHVLSFSRFT 63

Query: 58  SKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLN 117
            ++ K Y + EE   RF VFK NL   +       +    + +F+DLT  EF+R  LG  
Sbjct: 64  HRYGKKYQSVEEMKLRFSVFKENLDLIRSTNKKGLSYKLSLNQFADLTWQEFQRYKLGAA 123

Query: 118 RRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLS 177
           +     A  + +  +    +P   DWR+ G V+ VK+QG CGSCW+FS TGALE A+  +
Sbjct: 124 QNC--SATLKGSHKITEATVPDTKDWREDGIVSPVKEQGHCGSCWTFSTTGALEAAYHQA 181

Query: 178 TGELVSLSEQQLVDCDHECDPEESGSCDS-GCNGGLMNSAFEYILKAGGVEREKDYPYTG 236
            G+ +SLSEQQLVDC        +G+ ++ GC+GGL + AFEYI   GG++ E+ YPYTG
Sbjct: 182 FGKGISLSEQQLVDC--------AGTFNNFGCHGGLPSQAFEYIKYNGGLDTEEAYPYTG 233

Query: 237 TDGGSCKFDKSKIAAAVS---NFSVISSDEDQMAANLVKHGPLAVGINAVW-MQTYIGGV 292
            DGG CKF    I   V    N ++ + DE + A  LV+  P++V    V   + Y  GV
Sbjct: 234 KDGG-CKFSAKNIGVQVRDSVNITLGAEDELKHAVGLVR--PVSVAFEVVHEFRFYKKGV 290

Query: 293 SCPYICGKY---LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR 349
                CG     ++H VL VGYG          + PYW+IKNSWG  WG+NGY+K+ MG+
Sbjct: 291 FTSNTCGNTPMDVNHAVLAVGYGVE-------DDVPYWLIKNSWGGEWGDNGYFKMEMGK 343

Query: 350 NVC 352
           N+C
Sbjct: 344 NMC 346


>gi|339896953|ref|XP_003392238.1| cathepsin L-like protease [Leishmania infantum JPCM5]
 gi|14349351|gb|AAC38832.2| cysteine protease [Leishmania chagasi]
 gi|17384031|emb|CAD12393.1| cysteine proteinase [Leishmania infantum]
 gi|321398984|emb|CBZ08377.1| cathepsin L-like protease [Leishmania infantum JPCM5]
          Length = 443

 Score =  214 bits (545), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 130/313 (41%), Positives = 174/313 (55%), Gaps = 34/313 (10%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           F  FK  + + Y T  E   R   F+ NL   +  Q  +P A  G+TKF DL+ +EF  +
Sbjct: 38  FEEFKRTYRRAYGTLAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 113 FLGLNRRLRLPADAQKA------PILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSA 166
           +L  N      A  Q A           + +P   DWR+ GAVT VK+QGACGSCW+FSA
Sbjct: 98  YL--NGAAYFAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSCWAFSA 155

Query: 167 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK--AG 224
            G +E     +   LVSLSEQQLV CD +         D+GCNGGLM  AFE++L+   G
Sbjct: 156 VGNIESQWARAGHGLVSLSEQQLVSCDDK---------DNGCNGGLMLQAFEWLLRHMYG 206

Query: 225 GVEREKDYPYTGTDGGSCK-FDKSKI--AAAVSNFSVISSDEDQMAANLVKHGPLAVGIN 281
            V  EK YPYT  +G   +  + SK+   A +  + +I S+E  MAA L ++GP+A+ ++
Sbjct: 207 IVFTEKSYPYTSGNGDVAECLNSSKLVPGAQIDGYVMIPSNETVMAAWLAENGPIAIAVD 266

Query: 282 AVWMQTYIGGV--SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGE 339
           A    +Y  GV  SC    G  L+HGVL+VGY  +G         PYW+IKNSWGE+WGE
Sbjct: 267 ASSFMSYQSGVLTSCA---GDALNHGVLLVGYNKTGGV-------PYWVIKNSWGEDWGE 316

Query: 340 NGYYKICMGRNVC 352
            GY ++ MG N C
Sbjct: 317 KGYVRVVMGLNAC 329


>gi|343472974|emb|CCD15016.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 361

 Score =  214 bits (545), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 125/316 (39%), Positives = 166/316 (52%), Gaps = 22/316 (6%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEF 109
           +  F+ FK K+S++Y    E  +RFRVFK N+ RAK     +P A  GVT+FSD++P EF
Sbjct: 38  QQQFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSPEEF 97

Query: 110 RRQFL-GLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATG 168
           R  +  G           +K   + T   P   DWR  GAVT VKDQG C S W+FSATG
Sbjct: 98  RATYHNGAEYYAAALKRPRKVVNVSTGRPPMTVDWRKKGAVTPVKDQGKCDSSWAFSATG 157

Query: 169 ALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA--GGV 226
            +EG   ++  EL SLSEQ LV CD +         D GC  G  + AF +I+ +  G V
Sbjct: 158 NIEGQWKVAGHELTSLSEQMLVSCDTD---------DLGCRDGFPDIAFNWIVSSNKGNV 208

Query: 227 EREKDYPYTGTDGGSCKFDKSK--IAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW 284
             E+ YPY    G     DKS   + A + +   ++ DED +A  L + GP A+ ++A  
Sbjct: 209 FTEQSYPYASGGGNVPTCDKSGKVVGAKIRDHVDLARDEDMIAEWLARKGPAAITVDATS 268

Query: 285 MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYK 344
            Q Y GGV    I  K ++   L+VGY  +        + PYWIIKNSWG+ WGE GY +
Sbjct: 269 FQRYTGGVLTSCI-SKEMNSAALLVGYDDTS-------KPPYWIIKNSWGKGWGEEGYIR 320

Query: 345 ICMGRNVCGVDSMVSS 360
           I  G N C V     S
Sbjct: 321 IEKGTNQCLVQEYARS 336


>gi|126021|sp|P25775.1|LMCPA_LEIME RecName: Full=Cysteine proteinase A; Flags: Precursor
 gi|9573|emb|CAA44094.1| cysteine proteinase [Leishmania mexicana]
          Length = 354

 Score =  214 bits (544), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 137/367 (37%), Positives = 198/367 (53%), Gaps = 39/367 (10%)

Query: 12  LLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHD 71
           LL + V+     V    A+I Q  P       D+ + A  H+  FK +  K +    E  
Sbjct: 7   LLFAIVVTILFVVCYGSALIAQTPPP-----VDNFV-ASAHYGSFKKRHGKAFGGDAEEG 60

Query: 72  YRFRVFKANLRRAKRRQLLDPTAVHGVT-KFSDLTPSEFRRQFLGLNRRLRLPADAQKAP 130
           +RF  FK N++ A      +P A + V+ KF+DLTP EF + +L  +   R   +  K  
Sbjct: 61  HRFNAFKQNMQTAYFLNTQNPHAHYDVSGKFADLTPQEFAKLYLNPDYYARHLKN-HKED 119

Query: 131 ILPTNDLPT---DFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQ 187
           +   +  P+     DWRD GAVT VK+QG CGSCW+FSA G +EG    S   LVSLSEQ
Sbjct: 120 VHVDDSAPSGVMSVDWRDKGAVTPVKNQGLCGSCWAFSAIGNIEGQWAASGHSLVSLSEQ 179

Query: 188 QLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA--GGVEREKDYPYTGTDGGSCK-- 243
            LV CD         + D GCNGGLM+ A  +I+++  G V  E  YPY  T GG  +  
Sbjct: 180 MLVSCD---------NIDEGCNGGLMDQAMNWIMQSHNGSVFTEASYPY--TSGGGTRPP 228

Query: 244 -FDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKY- 301
             D+ ++ A ++ F  +  DE+++A  + K GP+AV ++A   Q Y GGV    +C  + 
Sbjct: 229 CHDEGEVGAKITGFLSLPHDEERIAEWVEKRGPVAVAVDATTWQLYFGGVVS--LCLAWS 286

Query: 302 LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDS--MVS 359
           L+HGVLIVG+  +        + PYWI+KNSWG +WGE GY ++ MG N C + +  + +
Sbjct: 287 LNHGVLIVGFNKNA-------KPPYWIVKNSWGSSWGEKGYIRLAMGSNQCMLKNYPVSA 339

Query: 360 SVAAIHT 366
           +V + HT
Sbjct: 340 TVESPHT 346


>gi|332326581|gb|AEE42614.1| cysteine protease [Leishmania aethiopica]
          Length = 443

 Score =  214 bits (544), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 127/313 (40%), Positives = 168/313 (53%), Gaps = 34/313 (10%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           F  FK  + + Y T  E   R   F+ NL   +  Q  +P A  G+TKF DL+ +EF  +
Sbjct: 38  FEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 113 FLGLNRRLRLPADAQKA------PILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSA 166
           +L  N      A  Q A           + +P   DWR+ GAVT VKDQGACGSCW+FSA
Sbjct: 98  YL--NGAAYFAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAFSA 155

Query: 167 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK--AG 224
            G +E    ++   L +LSEQQLV CD +         DSGC GGLM  AFE++L+   G
Sbjct: 156 VGNIESQWAVAGHRLTALSEQQLVSCDDK---------DSGCGGGLMTQAFEWLLRNMNG 206

Query: 225 GVEREKDYPYTGTDGG--SCKFDKSKIAAA-VSNFSVISSDEDQMAANLVKHGPLAVGIN 281
            +  E  YPY  + G   +C      +  A +  +  I S E  MAA L K GP+++ ++
Sbjct: 207 TMXTEDSYPYVSSTGDVPACTNSSQLVPGARIDGYVTIESSETVMAAWLAKSGPISIAVD 266

Query: 282 AVWMQTYIGGV--SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGE 339
           A    +Y  GV  SC    GK L+HGVL+VGY  +G       E PYW+IKNSWGE+WGE
Sbjct: 267 ASSFMSYXSGVLTSC---AGKXLNHGVLLVGYNMTG-------EVPYWVIKNSWGEDWGE 316

Query: 340 NGYYKICMGRNVC 352
            GY ++ MG N C
Sbjct: 317 KGYVRVTMGVNAC 329


>gi|1848231|gb|AAB48120.1| cathepsin L-like protease [Leishmania major]
          Length = 443

 Score =  214 bits (544), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 128/312 (41%), Positives = 173/312 (55%), Gaps = 32/312 (10%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           F  FK  + + Y T  E   R   F+ NL   +  Q  +P A  G+TKF DL+ +EF  +
Sbjct: 38  FEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 113 FLGLNRRLRLPADAQKA------PILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSA 166
           +L  N      A  Q A           + +P   DWR+ GAVT VK+QGACGSCW+FSA
Sbjct: 98  YL--NGAAYFAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSCWAFSA 155

Query: 167 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK--AG 224
            G +E    ++  +LV LSEQQLV CDH          D+GC GGLM  AFE++L+   G
Sbjct: 156 VGNIESQWAVAGHKLVRLSEQQLVSCDH---------VDNGCGGGLMLQAFEWVLRNMNG 206

Query: 225 GVEREKDYPYTGTDGG--SCKFDKSKIA--AAVSNFSVISSDEDQMAANLVKHGPLAVGI 280
            V  EK YPY   +G    C  + S++A  A +  +  + S E  MAA L K+GP+++ +
Sbjct: 207 TVFTEKSYPYVSGNGDVPECS-NSSELAPGARIDGYVSMESSERVMAAWLAKNGPISIAV 265

Query: 281 NAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGEN 340
           +A    +Y  GV    I G+ L+HGVL+VGY  +G       E PYW+IKNSWGE+WGE 
Sbjct: 266 DASSFMSYHSGVLTSCI-GEQLNHGVLLVGYNMTG-------EVPYWVIKNSWGEDWGEK 317

Query: 341 GYYKICMGRNVC 352
           GY ++ MG N C
Sbjct: 318 GYVRVTMGVNAC 329


>gi|394331735|gb|AFN27090.1| cysteine protease [Leishmania major]
          Length = 348

 Score =  214 bits (544), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 128/312 (41%), Positives = 172/312 (55%), Gaps = 32/312 (10%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           F  FK  + + Y T  E   R   F+ NL   +  Q  +P A  G+TKF DL+ +EF  +
Sbjct: 38  FEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 113 FLGLNRRLRLPADAQKA------PILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSA 166
           +L  N      A  Q A           + +P   DWR  GAVT VK+QGACGSCW+FSA
Sbjct: 98  YL--NGAAYFAAAKQHAGQHYRKARADLSAVPDAVDWRKKGAVTPVKNQGACGSCWAFSA 155

Query: 167 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK--AG 224
            G +E    ++  +LV LSEQQLV CDH          D+GC GGLM  AFE++L+   G
Sbjct: 156 VGNIESQWAVAGHKLVRLSEQQLVSCDH---------VDNGCGGGLMLQAFEWVLRNMNG 206

Query: 225 GVEREKDYPYTGTDGG--SCKFDKSKIA--AAVSNFSVISSDEDQMAANLVKHGPLAVGI 280
            V  EK YPY   +G    C  + S++A  A +  +  + S E  MAA L K+GP+++ +
Sbjct: 207 TVFTEKSYPYVSGNGDVPECS-NSSELAPGARIDGYVSMESSERVMAAWLAKNGPISIAV 265

Query: 281 NAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGEN 340
           +A    +Y  GV    I G+ L+HGVL+VGY  +G       E PYW+IKNSWGE+WGE 
Sbjct: 266 DASSFMSYHSGVLTSCI-GEQLNHGVLLVGYNMTG-------EVPYWVIKNSWGEDWGEK 317

Query: 341 GYYKICMGRNVC 352
           GY ++ MG N C
Sbjct: 318 GYVRVTMGVNAC 329


>gi|371781445|emb|CCA95082.1| putative responsive to dehydration 19, partial [Ginkgo biloba]
          Length = 130

 Score =  214 bits (544), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 101/128 (78%), Positives = 116/128 (90%), Gaps = 2/128 (1%)

Query: 219 YILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAV 278
           Y LKAGG+E+E+DYPYTGTDG +CKFD  K+ AAVSNFSV+S DEDQ+AANLVK+GPL+V
Sbjct: 4   YALKAGGLEKEEDYPYTGTDG-TCKFDDKKVVAAVSNFSVVSIDEDQIAANLVKNGPLSV 62

Query: 279 GINAVWMQTYIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENW 337
           GINAV+MQTYIGGVSCPYIC K  LDHGVL+VGYGS+G+APIR K+KPYWIIKNSWG NW
Sbjct: 63  GINAVFMQTYIGGVSCPYICSKRNLDHGVLLVGYGSAGYAPIRMKDKPYWIIKNSWGANW 122

Query: 338 GENGYYKI 345
           GE GYYK+
Sbjct: 123 GEQGYYKL 130


>gi|326430491|gb|EGD76061.1| cathepsin [Salpingoeca sp. ATCC 50818]
          Length = 381

 Score =  214 bits (544), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 133/294 (45%), Positives = 172/294 (58%), Gaps = 33/294 (11%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH----GVTKFSDLTPSE 108
           F  FK+ F K Y + EE   RF +F  NL    R        +H    GV +F+DLT  E
Sbjct: 20  FDDFKTTFEKQYESPEEEARRFAIFADNLAFIARHNAEAARGLHTHTVGVNQFADLTNEE 79

Query: 109 FRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATG 168
           +R+ +L       L  + Q+  +   N      DWR  GAVT +K+QG CGSCWSFS TG
Sbjct: 80  YRQLYLRPYPTELLGRERQEVWLDGPN--AGSVDWRQKGAVTPIKNQGQCGSCWSFSTTG 137

Query: 169 ALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSC-DSGCNGGLMNSAFEYILKAGGVE 227
           ++EGAH ++TG LVSLSEQQLVDC        SGS  + GCNGGLM++AF+YI+  GG++
Sbjct: 138 SVEGAHAIATGNLVSLSEQQLVDC--------SGSFGNQGCNGGLMDNAFKYIISNGGLD 189

Query: 228 REKDYPYTGTDGGSCKFDKSKIAAAVSNFS-VISSDEDQMAANLVKHGPLAVGINA--VW 284
            E+DYPYT  DG   K  +SK A ++S +  V  ++EDQ+AA  V+ GP++V I A    
Sbjct: 190 TEQDYPYTARDGVCDKSKESKHAVSISGYKDVPQNNEDQLAA-AVEKGPVSVAIEADQQS 248

Query: 285 MQTYIGGV-SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENW 337
            Q Y  GV S P  CG  LDHGVL+VGY S            YWI+KNSWG +W
Sbjct: 249 FQMYSSGVFSGP--CGTNLDHGVLVVGYTSD-----------YWIVKNSWGASW 289


>gi|86355549|ref|YP_473217.1| Cathepsin [Hyphantria cunea nucleopolyhedrovirus]
 gi|86198154|dbj|BAE72318.1| Cathepsin [Hyphantria cunea nucleopolyhedrovirus]
          Length = 324

 Score =  214 bits (544), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 118/326 (36%), Positives = 180/326 (55%), Gaps = 28/326 (8%)

Query: 46  LLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLT 105
           LL A  +F  F  KF+K Y+++ E   RF++F+ NL     +   D TA + + KFSDL+
Sbjct: 21  LLKAPSYFEDFLHKFNKHYSSESEKLRRFQIFQHNLEEIIIKNQNDTTAQYEINKFSDLS 80

Query: 106 PSEFRRQFLGLNRRLRLPADAQ---KAPIL--PTNDLPTDFDWRDHGAVTGVKDQGACGS 160
             E   ++ GL     LP   Q   +  +L  P +  P +FDWR    VT VK+QG CG+
Sbjct: 81  KDETISKYTGL----ALPLQTQNFCEVVVLNRPPDKGPLEFDWRRLNKVTSVKNQGICGA 136

Query: 161 CWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYI 220
           CW+F+   +LE    +   +L++LSEQQL+DCD+          D+GCNGGL+++A+E +
Sbjct: 137 CWAFATLASLESQFAIKHNQLINLSEQQLIDCDY---------VDAGCNGGLLHTAYEAV 187

Query: 221 LKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGI 280
           ++ GGV+ E DYPY G+DG         +      +  I+  E+++   L   GP+ V I
Sbjct: 188 MQMGGVQAENDYPYEGSDGNCRVDVAKFVVKVKKCYRYIAVFEEKLKDLLRIVGPIPVAI 247

Query: 281 NAVWMQTYIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGE 339
           +A  +  Y  G+     C  Y L+H VL+VGYG            PYWI+KN+WGE+WGE
Sbjct: 248 DASDIVNYRRGIM--RYCSNYGLNHAVLLVGYGVEN-------NVPYWILKNTWGEDWGE 298

Query: 340 NGYYKICMGRNVCGVDSMVSSVAAIH 365
            GY+++    N CG+ + + + A I+
Sbjct: 299 QGYFRVQQNINACGIRNELLASAEIY 324


>gi|116781957|gb|ABK22314.1| unknown [Picea sitchensis]
          Length = 369

 Score =  214 bits (544), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 119/297 (40%), Positives = 161/297 (54%), Gaps = 26/297 (8%)

Query: 68  EEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQ 127
           EEH  RF +FK N++        D     G+ KF+DL+  EF+  ++G    LR   + Q
Sbjct: 62  EEHAERFEIFKENVKYIDSVNKKDSPYKLGLNKFADLSNEEFKAIYMGTKMDLRGDREVQ 121

Query: 128 KAPILPTND--LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLS 185
               +  N   LP   DWR  GAV  VK+QG CGSCW+FS   ++EG ++++TG LVSLS
Sbjct: 122 SGSFMYQNSEPLPASIDWRQKGAVAAVKNQGHCGSCWAFSTVASVEGINYITTGNLVSLS 181

Query: 186 EQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYT--GTDGGSCK 243
           EQQLVDC  E         +SGCNGGLM++AF+YI+  GG+  E +YPYT   T+  S K
Sbjct: 182 EQQLVDCSTE---------NSGCNGGLMDTAFQYIINNGGIVTEDNYPYTAEATECSSTK 232

Query: 244 FDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKY 301
            +       +  F  + ++ +Q     V H P++V I A     Q Y  GV     CG  
Sbjct: 233 INSQTTRVVIDGFEDVPANNEQALKEAVAHQPVSVAIEASGQDFQFYSTGVFTGK-CGTA 291

Query: 302 LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMG----RNVCGV 354
           LDHGV+ VGYG+S   P       YWI++NSWG  WGE GY ++  G       CG+
Sbjct: 292 LDHGVVAVGYGTS---PEGIN---YWIVRNSWGPKWGEEGYIRMQQGIEAAEGKCGI 342


>gi|229596051|ref|XP_001013456.3| Papain family cysteine protease containing protein [Tetrahymena
           thermophila]
 gi|225565626|gb|EAR93211.3| Papain family cysteine protease containing protein [Tetrahymena
           thermophila SB210]
          Length = 315

 Score =  214 bits (544), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 127/312 (40%), Positives = 176/312 (56%), Gaps = 35/312 (11%)

Query: 48  NAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPS 107
           N +  +S FK+K++K YA  +   YR  +F  NL+  +       T  +G+T+F D+T  
Sbjct: 35  NIQALWSAFKTKYNKKYADPDFERYRIEIFTENLKVVESN-----TKNYGITQFMDITRE 89

Query: 108 EFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSAT 167
           EF++ +L L  +  L A    +P    ND   + DW   GAVT VKDQG CGSCWSFS T
Sbjct: 90  EFKQTYLTLKMKNGLKA----SPFAKFNDAGVEIDWTTKGAVTPVKDQGQCGSCWSFSTT 145

Query: 168 GALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVE 227
           GA+EGA FLST +L SLSEQ LVDC        S   + GCNGGLM++AF++I +  G+ 
Sbjct: 146 GAVEGALFLSTKKLTSLSEQYLVDC--------SKDGNEGCNGGLMDTAFDFISQH-GIP 196

Query: 228 REKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQT 287
            E  YPY   D G+CK         +S+ + I    D +  N ++  P+A+ ++A   Q 
Sbjct: 197 TEAAYPYKAVD-GTCKMTSGPY--KISSHTDIQDCNDLL--NKIQKQPIAIAVDANNFQY 251

Query: 288 YIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICM 347
           Y   +     CG  LDHGVL+VGY +SG          YW +KNSWG NWGE+G+ ++  
Sbjct: 252 YQKDIFSD--CGTELDHGVLLVGYSASG---------KYWKVKNSWGPNWGESGFIRLAA 300

Query: 348 GRNVCGVDSMVS 359
           G N CG+ +M S
Sbjct: 301 G-NTCGLCNMAS 311


>gi|18424347|ref|NP_568921.1| thiol protease aleurain [Arabidopsis thaliana]
 gi|71152227|sp|Q8H166.2|ALEU_ARATH RecName: Full=Thiol protease aleurain; Short=AtALEU; AltName:
           Full=Senescence-associated gene product 2; Flags:
           Precursor
 gi|7230640|gb|AAF43041.1|AF233883_1 AALP protein [Arabidopsis thaliana]
 gi|13430722|gb|AAK25983.1|AF360273_1 putative cysteine proteinase AALP [Arabidopsis thaliana]
 gi|9757740|dbj|BAB08221.1| AALP protein [Arabidopsis thaliana]
 gi|21617934|gb|AAM66984.1| cysteine proteinase AALP [Arabidopsis thaliana]
 gi|23397068|gb|AAN31819.1| putative cysteine proteinase AALP [Arabidopsis thaliana]
 gi|23397074|gb|AAN31822.1| putative cysteine proteinase AALP [Arabidopsis thaliana]
 gi|24417304|gb|AAN60262.1| unknown [Arabidopsis thaliana]
 gi|222423506|dbj|BAH19723.1| AT5G60360 [Arabidopsis thaliana]
 gi|222424411|dbj|BAH20161.1| AT5G60360 [Arabidopsis thaliana]
 gi|332009930|gb|AED97313.1| thiol protease aleurain [Arabidopsis thaliana]
          Length = 358

 Score =  214 bits (544), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 135/348 (38%), Positives = 186/348 (53%), Gaps = 35/348 (10%)

Query: 26  DDDAMIRQVVPSDG----EQSEDHLLNAEHH---FSLFKSKFSKTYATQEEHDYRFRVFK 78
           D+   IR V  SDG    E+S   +L    H   F+ F  ++ K Y   EE   RF +FK
Sbjct: 27  DESNPIRMV--SDGLREVEESVSQILGQSRHVLSFARFTHRYGKKYQNVEEMKLRFSIFK 84

Query: 79  ANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLP 138
            NL   +       +   GV +F+DLT  EF+R  LG  +     A  + +  +    LP
Sbjct: 85  ENLDLIRSTNKKGLSYKLGVNQFADLTWQEFQRTKLGAAQNC--SATLKGSHKVTEAALP 142

Query: 139 TDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDP 198
              DWR+ G V+ VKDQG CGSCW+FS TGALE A+  + G+ +SLSEQQLVDC    + 
Sbjct: 143 ETKDWREDGIVSPVKDQGGCGSCWTFSTTGALEAAYHQAFGKGISLSEQQLVDCAGAFN- 201

Query: 199 EESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAV---SN 255
                 + GCNGGL + AFEYI   GG++ EK YPYTG D  +CKF    +   V    N
Sbjct: 202 ------NYGCNGGLPSQAFEYIKSNGGLDTEKAYPYTGKD-ETCKFSAENVGVQVLNSVN 254

Query: 256 FSVISSDEDQMAANLVKHGPLAVGINAVW-MQTYIGGVSCPYICGKY---LDHGVLIVGY 311
            ++ + DE + A  LV+  P+++    +   + Y  GV     CG     ++H VL VGY
Sbjct: 255 ITLGAEDELKHAVGLVR--PVSIAFEVIHSFRLYKSGVYTDSHCGSTPMDVNHAVLAVGY 312

Query: 312 GSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVS 359
           G            PYW+IKNSWG +WG+ GY+K+ MG+N+CG+ +  S
Sbjct: 313 GVEDGV-------PYWLIKNSWGADWGDKGYFKMEMGKNMCGIATCAS 353


>gi|302790836|ref|XP_002977185.1| hypothetical protein SELMODRAFT_106228 [Selaginella moellendorffii]
 gi|300155161|gb|EFJ21794.1| hypothetical protein SELMODRAFT_106228 [Selaginella moellendorffii]
          Length = 299

 Score =  214 bits (544), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 123/316 (38%), Positives = 173/316 (54%), Gaps = 31/316 (9%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLL-DPTAVHGVTKFSDLTPSEFRR 111
           F  + +K  K+Y++  E   R  +F   L   ++     + T   G+ KFSDLT +EFR 
Sbjct: 2   FEDWAAKHGKSYSSDSEKARRLMIFSDTLAYIEKHNAQPNTTFTLGLNKFSDLTNAEFRA 61

Query: 112 QFLGLNRRLRLPADAQKAPI----LPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSAT 167
            ++G   + + P    + P     +  + LPT  DWR  GAVT +KDQG CGSCW+FSA 
Sbjct: 62  NYVG---KFKSPRYQDRRPAKDVDVDVSSLPTSLDWRQEGAVTPIKDQGQCGSCWAFSAI 118

Query: 168 GALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVE 227
            ++E AHFL+T ELVSLSEQQL+DCD         + D GC GG    AF+++++ GGV 
Sbjct: 119 ASIESAHFLATKELVSLSEQQLIDCD---------TVDQGCQGGFPEDAFKFVVENGGVT 169

Query: 228 REKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGI--NAVWM 285
            E+ YPYTG   GSC  +K+K+   ++ +  ++ D        V   P+ VGI  +    
Sbjct: 170 TEEAYPYTGF-AGSCNANKNKV-VEITGYKDVTKDSADALMKAVSKTPVTVGICGSDQNF 227

Query: 286 QTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKI 345
           Q Y  G+     C    DH VL++GYG+ G         PYWIIKNSWG +WGENG+ KI
Sbjct: 228 QNYRSGILSGQ-CSNSRDHAVLVIGYGTEG-------GMPYWIIKNSWGTSWGENGFMKI 279

Query: 346 CM--GRNVCGVDSMVS 359
               G  +CG++   S
Sbjct: 280 KKKDGEGMCGMNGQSS 295


>gi|225428879|ref|XP_002285299.1| PREDICTED: cysteine proteinase RD21a-like [Vitis vinifera]
          Length = 469

 Score =  214 bits (544), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 120/310 (38%), Positives = 172/310 (55%), Gaps = 24/310 (7%)

Query: 59  KFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLG--- 115
           K  K+Y    E + RF +FK NLR  +    ++ T   G+ +F+DLT  E+R ++LG   
Sbjct: 60  KHGKSYNALGERERRFEIFKDNLRFIEEHNAVNRTYKVGLNRFADLTNEEYRSRYLGRRD 119

Query: 116 -LNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAH 174
              R LR    + +       DLP   DWR+ GAV  VKDQG CGSCW+FS   A+EG +
Sbjct: 120 ETRRGLRASRVSDRYSFRAGEDLPESVDWREKGAVVPVKDQGNCGSCWAFSTIAAVEGIN 179

Query: 175 FLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPY 234
            ++TG+L+SLSEQ+LVDCD         S + GCNGGLM+ AFE+I+  GG++ E+DYPY
Sbjct: 180 QIATGDLISLSEQELVDCDK--------SYNQGCNGGLMDYAFEFIINNGGIDSEEDYPY 231

Query: 235 TGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGV 292
              D       K+    ++  +  +  ++++     V + P++V I A     Q Y  GV
Sbjct: 232 RAADTTCDPNRKNARVVSIDGYEDVPQNDERSLKKAVANQPVSVAIEAGGRAFQLYQSGV 291

Query: 293 SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVC 352
                CG  LDHGV+ VGYG+            YWI++NSWG NWGE+GY K  + RN+ 
Sbjct: 292 FTGQ-CGTQLDHGVVAVGYGTENSV-------DYWIVRNSWGPNWGESGYIK--LERNLA 341

Query: 353 GVDSMVSSVA 362
           G ++    +A
Sbjct: 342 GTETGKCGIA 351


>gi|413919736|gb|AFW59668.1| cysteine protease 1 [Zea mays]
          Length = 469

 Score =  214 bits (544), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 125/324 (38%), Positives = 178/324 (54%), Gaps = 28/324 (8%)

Query: 35  VPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTA 94
           + S GE+SE+    A   ++ + +   +TY    E + RF VF+ NLR            
Sbjct: 31  IVSYGERSEEE---ARRMYAEWMAAHGRTYNAVGEEERRFEVFRDNLRYVDAHNAAADAG 87

Query: 95  VH----GVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTN-DLPTDFDWRDHGAV 149
           VH    G+ +F+DLT  E+R  +LG+  R +         +   N DLP   DWR  GAV
Sbjct: 88  VHSFRLGLNRFADLTNDEYRATYLGVRSRPQRERRLGDRYLAGDNEDLPESVDWRAKGAV 147

Query: 150 TGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCN 209
             VKDQG+CGSCW+FS   A+EG + + TG+++SLSEQ+LVDCD         S + GCN
Sbjct: 148 AEVKDQGSCGSCWAFSTIAAVEGINQIVTGDMISLSEQELVDCDT--------SYNQGCN 199

Query: 210 GGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAAN 269
           GGLM+ AFE+I+  GG++ E+DYPY GTDG      K+     + ++  + ++ ++    
Sbjct: 200 GGLMDYAFEFIINNGGIDTEEDYPYKGTDGRCDVNRKNAKVVTIDSYEDVPANSEKSLQK 259

Query: 270 LVKHGPLAVGINA--VWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYW 327
            V + P++V I A     Q Y  G+     CG  LDHGV  VGYG+          K YW
Sbjct: 260 AVANQPISVAIEAGGRAFQLYNSGIFTG-TCGTALDHGVTAVGYGTE-------NGKDYW 311

Query: 328 IIKNSWGENWGENGYYKICMGRNV 351
           I+KNSWG +WGE+GY +  M RN+
Sbjct: 312 IVKNSWGSSWGESGYVR--MERNI 333


>gi|157864847|ref|XP_001681132.1| cathepsin L-like protease [Leishmania major strain Friedlin]
 gi|68124426|emb|CAJ02282.1| cathepsin L-like protease [Leishmania major strain Friedlin]
          Length = 443

 Score =  214 bits (544), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 128/312 (41%), Positives = 173/312 (55%), Gaps = 32/312 (10%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           F  FK  + + Y T  E   R   F+ NL   +  Q  +P A  G+TKF DL+ +EF  +
Sbjct: 38  FEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 113 FLGLNRRLRLPADAQKA------PILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSA 166
           +L  N      A  Q A           + +P   DWR+ GAVT VK+QGACGSCW+FSA
Sbjct: 98  YL--NGAAYFAAVKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSCWAFSA 155

Query: 167 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK--AG 224
            G +E    ++  +LV LSEQQLV CDH          D+GC GGLM  AFE++L+   G
Sbjct: 156 VGNIESQWAVAGHKLVRLSEQQLVSCDH---------VDNGCGGGLMLQAFEWVLRNMNG 206

Query: 225 GVEREKDYPYTGTDGG--SCKFDKSKIA--AAVSNFSVISSDEDQMAANLVKHGPLAVGI 280
            V  EK YPY   +G    C  + S++A  A +  +  + S E  MAA L K+GP+++ +
Sbjct: 207 TVFTEKSYPYVSGNGDVPECS-NSSELAPGARIDGYVSMESSERVMAAWLAKNGPISIAV 265

Query: 281 NAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGEN 340
           +A    +Y  GV    I G+ L+HGVL+VGY  +G       E PYW+IKNSWGE+WGE 
Sbjct: 266 DASSFMSYHSGVLTSCI-GEQLNHGVLLVGYNMTG-------EVPYWVIKNSWGEDWGEK 317

Query: 341 GYYKICMGRNVC 352
           GY ++ MG N C
Sbjct: 318 GYVRVTMGVNAC 329


>gi|2499879|sp|Q40143.1|CYSP3_SOLLC RecName: Full=Cysteine proteinase 3; Flags: Precursor
 gi|1235545|emb|CAA88629.1| pre-pro-cysteine proteinase [Solanum lycopersicum]
          Length = 356

 Score =  213 bits (543), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 145/376 (38%), Positives = 203/376 (53%), Gaps = 42/376 (11%)

Query: 1   MERLILSSLLLLLLSSVLASAVA---VNDDDAMIRQVVPSDGEQSEDHLLNAEHH----- 52
           M RL   SL+L+L++ + A+A+A      D   IRQVV  D  + E+ +L          
Sbjct: 1   MSRL---SLVLILVAGLFATALAGPATFADKNPIRQVVFPD--ELENGILQVVGQTRSAL 55

Query: 53  -FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRR 111
            F+ F  +  K Y + EE   RF +F  NL+  +       +   G+ +F+DLT  EFR+
Sbjct: 56  SFARFAIRHRKRYDSVEEIKQRFEIFLDNLKMIRSHNRKGLSYKLGINEFTDLTWDEFRK 115

Query: 112 QFLGLNRRLRLPADAQKAPILPTND-LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGAL 170
             LG ++     +   K  +  TN  LP   DWR  G V+ VK QG CGSCW+FS TGAL
Sbjct: 116 HKLGASQNC---SATTKGNLKLTNVVLPETKDWRKDGIVSPVKAQGKCGSCWTFSTTGAL 172

Query: 171 EGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREK 230
           E A+  + G+ +SLSEQQLVDC    +       + GCNGGL + AFEYI   GG++ E+
Sbjct: 173 EAAYAQAFGKGISLSEQQLVDCAGAFN-------NFGCNGGLPSQAFEYIKFNGGLDTEE 225

Query: 231 DYPYTGTDGGSCKFDKSKIAAAV---SNFSVISSDEDQMAANLVKHGPLAVGINAV-WMQ 286
            YPYTG + G CKF ++ I   V    N ++ +  E + A  LV+  P++V    V   +
Sbjct: 226 AYPYTGKN-GICKFSQANIGVKVISSVNITLGAEYELKYAVALVR--PVSVAFEVVKGFK 282

Query: 287 TYIGGVSCPYICGKY---LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYY 343
            Y  GV     CG     ++H VL VGYG            PYW+IKNSWG +WGE+GY+
Sbjct: 283 QYKSGVYASTECGDTPMDVNHAVLAVGYGVE-------NGTPYWLIKNSWGADWGEDGYF 335

Query: 344 KICMGRNVCGVDSMVS 359
           K+ MG+N+CGV +  S
Sbjct: 336 KMEMGKNMCGVATCAS 351


>gi|28192371|gb|AAK07729.1| NTCP23-like cysteine proteinase [Nicotiana tabacum]
          Length = 360

 Score =  213 bits (543), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 142/376 (37%), Positives = 198/376 (52%), Gaps = 38/376 (10%)

Query: 1   MERLILSSLLLL---LLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNA----EHHF 53
           M R  L   L++   L +S LA      D++  IRQVV     + E+ +L       H  
Sbjct: 1   MSRFSLLLALVVAGGLFASALAGPATFADENP-IRQVVSDGLHELENAILQVVGKTRHAL 59

Query: 54  S--LFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRR 111
           S   F  ++ K Y + EE   RF VF  NL+  +       +   GV +F+DLT  EFRR
Sbjct: 60  SSARFAHRYGKRYESVEEIKQRFEVFLDNLKMIRSHNKKGLSYKLGVNEFTDLTWDEFRR 119

Query: 112 QFLGLNRRLRLPADAQKAPILPTND-LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGAL 170
             LG  +     +   K  +  TN  LP    WR+ G V+ VK+QG CGSCW+FS TGAL
Sbjct: 120 DRLGAAQNC---SATTKGNLKVTNVVLPETKGWREAGIVSPVKNQGKCGSCWTFSTTGAL 176

Query: 171 EGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREK 230
           E A+  + G+ +SLSEQQLVDC    +       + GCNGGL + AFEYI   GG++ E+
Sbjct: 177 EAAYSQAFGKGISLSEQQLVDCAGAFN-------NFGCNGGLPSQAFEYIKSNGGLDTEE 229

Query: 231 DYPYTGTDGGSCKFDKSKIAAAV---SNFSVISSDEDQMAANLVKHGPLAVGINAV-WMQ 286
            YPYTG + G CKF    +   V    N ++ + DE + A  LV+  P+++    +   +
Sbjct: 230 AYPYTGKN-GLCKFSSENVGVKVIDSVNITLGAEDELKYAVALVR--PVSIAFEVIKGFK 286

Query: 287 TYIGGVSCPYICGKY---LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYY 343
            Y  GV     CG     ++H VL VGYG            PYW+IKNSWG +WG+NGY+
Sbjct: 287 QYKSGVYTSTECGNTPMDVNHAVLAVGYGVENGV-------PYWLIKNSWGADWGDNGYF 339

Query: 344 KICMGRNVCGVDSMVS 359
           K+ MG+N+CG+ +  S
Sbjct: 340 KMEMGKNMCGIATCAS 355


>gi|356564154|ref|XP_003550321.1| PREDICTED: cysteine proteinase RD21a-like [Glycine max]
          Length = 476

 Score =  213 bits (543), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 128/354 (36%), Positives = 195/354 (55%), Gaps = 37/354 (10%)

Query: 4   LILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSED--HLLNAEHHFSLFKS--- 58
           + +++++LL     ++SA+ ++        ++  D   ++    L   E   S+++    
Sbjct: 13  MTMAAIVLLFTVFAVSSALDMS--------IISYDSAHADKAATLRTEEELMSMYEQWLV 64

Query: 59  KFSKTYATQEEHDYRFRVFKANLRRAK-RRQLLDPTAVHGVTKFSDLTPSEFRRQFLGL- 116
           K  K Y    E + RF++FK NLR         D T   G+ +F+DLT  E+R ++LG  
Sbjct: 65  KHGKVYNALGEKEKRFQIFKDNLRFIDDHNSAEDRTYKLGLNRFADLTNEEYRAKYLGTK 124

Query: 117 ---NRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGA 173
              NRRL      + AP +  + LP   DWR  GAV  VKDQG CGSCW+FSA GA+EG 
Sbjct: 125 IDPNRRLGKTPSNRYAPRV-GDKLPDSVDWRKEGAVPPVKDQGGCGSCWAFSAIGAVEGI 183

Query: 174 HFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYP 233
           + + TGEL+SLSEQ+LVDCD           + GCNGGLM+ AFE+I+  GG++ ++DYP
Sbjct: 184 NKIVTGELISLSEQELVDCDT--------GYNQGCNGGLMDYAFEFIINNGGIDSDEDYP 235

Query: 234 YTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGIN--AVWMQTYIGG 291
           Y G DG    + K+    ++ ++  + + ++      V + P++V I       Q Y+ G
Sbjct: 236 YRGVDGRCDTYRKNAKVVSIDDYEDVPAYDELALKKAVANQPVSVAIEGGGREFQLYVSG 295

Query: 292 VSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKI 345
           V     CG  LDHGV+ VGYG++       K   YWI++NSWG +WGE+GY ++
Sbjct: 296 VFTGR-CGTALDHGVVAVGYGTA-------KGHDYWIVRNSWGSSWGEDGYIRL 341


>gi|300121328|emb|CBK21708.2| unnamed protein product [Blastocystis hominis]
          Length = 318

 Score =  213 bits (543), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 128/302 (42%), Positives = 171/302 (56%), Gaps = 21/302 (6%)

Query: 45  HLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDL 104
           +L N+E  F+ + SK+ KTYA  EE  YR RVF  NL + K     +     GV KF+D+
Sbjct: 16  NLRNSE--FTSYMSKYGKTYAAPEEARYRLRVFNDNLLKIKEHNAKNLPWTLGVNKFADV 73

Query: 105 TPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSF 164
           +  EF  +F G  +  +     Q   +    D+P   DWR+ GAVT VK+QG CGSCW+F
Sbjct: 74  SAEEFAYKFCGCAKDPKTRGTRQTTLV---GDVPARVDWREQGAVTPVKNQGMCGSCWAF 130

Query: 165 SATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAG 224
           S TG  EGA+FL TG LVSLSEQQLVDC    DPE     + GC+GG   SA +Y+ K  
Sbjct: 131 STTGTTEGAYFLKTGNLVSLSEQQLVDCAR--DPEYE---NFGCSGGWPWSAVDYVTKH- 184

Query: 225 GVEREKDYPYTGTDGGSCKFDKSKIAA-AVSNFSVISSDEDQMAANLVKHGPLAVGINAV 283
           G+  E+DYPY G D   CK    K+A  +V    +   DED +A  + K  P+++ ++A 
Sbjct: 185 GLCTEEDYPYKGVD-AECKESSCKVAVQSVDKVQLPVGDEDSLAVAVSKT-PVSIVLDAT 242

Query: 284 WMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYY 343
            MQ Y  G+     C + ++H VL VGY       ++     YWIIKNSWG +WGE GY 
Sbjct: 243 AMQLYDKGIITR--CSESINHAVLAVGYDKDAETGLK-----YWIIKNSWGADWGEEGYC 295

Query: 344 KI 345
           +I
Sbjct: 296 RI 297


>gi|343470212|emb|CCD17026.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 445

 Score =  213 bits (543), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 121/316 (38%), Positives = 167/316 (52%), Gaps = 22/316 (6%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEF 109
           +  F+ FK K+S++Y    E  +RFRVFK N+ RAK     +P A  GVT+FSD++P EF
Sbjct: 38  QQQFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSPEEF 97

Query: 110 RRQFL-GLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATG 168
           R  +  G           +K   + T   P   DWR  GAVT VKDQG C S W+F+  G
Sbjct: 98  RATYHNGAEYYAAALKRPRKVVNVSTGKAPEAVDWRKKGAVTPVKDQGKCDSSWAFTVIG 157

Query: 169 ALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA--GGV 226
            +EG   ++  EL SLSEQ LV CD           D GC  G M++AF++I+ +  G V
Sbjct: 158 NIEGQWKIAGHELTSLSEQMLVSCDTN---------DLGCRAGFMDTAFKWIVSSNNGNV 208

Query: 227 EREKDYPYTGTDGG--SCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW 284
             E+ YPY    G   +C      + A + +   I  +E+ +A  L K GP+A+ ++A  
Sbjct: 209 FTEQSYPYASGGGNVPTCNKSGKVVGANIDDHVHILDNENAIAEWLAKKGPVAIAVDATS 268

Query: 285 MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYK 344
            Q+Y GGV    I  K ++   L+VGY  +        + PYWIIKNSW + WGE GY +
Sbjct: 269 FQSYTGGVLTSCI-SKEVNSAALLVGYDDTS-------KPPYWIIKNSWSKGWGEEGYIR 320

Query: 345 ICMGRNVCGVDSMVSS 360
           I  G N C +   VSS
Sbjct: 321 IEKGTNQCRMKEYVSS 336


>gi|228244|prf||1801240B Cys protease 2
          Length = 323

 Score =  213 bits (543), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 131/323 (40%), Positives = 171/323 (52%), Gaps = 25/323 (7%)

Query: 46  LLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRA----KRRQLLDPTAVHGVTKF 101
           L  A   +  FK K+ + Y   EE  YR  +F+ N +      K+ +  + T    + KF
Sbjct: 13  LAAASPSWEHFKGKYGRQYVDAEEDSYRRVIFEQNQKYIEEFNKKYENGEVTFNLAMNKF 72

Query: 102 SDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSC 161
            D+T  EF     G   R   P      P   T    T+ DWR  GAVT VKDQG CGSC
Sbjct: 73  GDMTLEEFNAVMKGNIPRRSAPVSV-FYPKKETGPQATEVDWRTKGAVTPVKDQGQCGSC 131

Query: 162 WSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYIL 221
           W+FS TG+LEG HFL TG L+SL+EQQLVDC     P+       GCNGG MN AF+YI 
Sbjct: 132 WAFSTTGSLEGQHFLKTGSLISLAEQQLVDCSRPYGPQ-------GCNGGWMNDAFDYIK 184

Query: 222 KAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKH-GPLAVGI 280
              G++ E  YPY   D GSC+FD + +AA  S  + I+S  +      V+  GP++V I
Sbjct: 185 ANNGIDTEASYPYEARD-GSCRFDSNSVAATCSGHTNIASGSETGLQQAVRDIGPISVTI 243

Query: 281 NAVW--MQTYIGGVSCPYICG-KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENW 337
           +A     Q Y  GV     C   YLDH VL VGYGS G        + +W++KNSW  +W
Sbjct: 244 DAAHSSFQFYSSGVYYEPSCSPSYLDHAVLAVGYGSEG-------GQDFWLVKNSWATSW 296

Query: 338 GENGYYKICMGR-NVCGVDSMVS 359
           G+ GY K+   R N CG+ ++ S
Sbjct: 297 GDAGYIKMSRNRNNNCGIATVAS 319


>gi|195334204|ref|XP_002033774.1| GM21500 [Drosophila sechellia]
 gi|194125744|gb|EDW47787.1| GM21500 [Drosophila sechellia]
          Length = 341

 Score =  213 bits (543), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 134/320 (41%), Positives = 176/320 (55%), Gaps = 30/320 (9%)

Query: 56  FKSKFSKTYATQEEHDYRFRVFKANLRR-AKRRQLLDPTAVH---GVTKFSDLTPSEFRR 111
           FK +  K Y    E  +R ++F  N  + AK  Q      V     V K++DL   EFR+
Sbjct: 32  FKLEHRKNYQDDTEERFRLKIFNENKHKIAKHNQRFAEGKVSFKLAVNKYADLLHHEFRQ 91

Query: 112 QFLGLN----RRLRLPADAQKAP--ILPTN-DLPTDFDWRDHGAVTGVKDQGACGSCWSF 164
              G N    ++LR   ++ K    I P +  LP   DWR  GAVT VKDQG CGSCW+F
Sbjct: 92  LMNGFNYTLHKQLRAADESFKGVTFISPAHVTLPKSVDWRTKGAVTAVKDQGHCGSCWAF 151

Query: 165 SATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAG 224
           S+TGALEG HF  +G LVSLSEQ LVDC        +   ++GCNGGLM++AF YI   G
Sbjct: 152 SSTGALEGQHFRKSGVLVSLSEQNLVDC-------STKYGNNGCNGGLMDNAFRYIKDNG 204

Query: 225 GVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVI-SSDEDQMAANLVKHGPLAVGINAV 283
           G++ EK YPY   D  SC F+K  I A    F+ I   DE +MA  +   GP+AV I+A 
Sbjct: 205 GIDTEKSYPYEAID-DSCHFNKGTIGATDRGFTDIPQGDEKKMAEAVATVGPVAVAIDAS 263

Query: 284 W--MQTYIGGV-SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGEN 340
               Q Y  GV + P    + LDHGVL+VG+G+          + YW++KNSWG  WG+ 
Sbjct: 264 HESFQFYSEGVYNEPQCDAQNLDHGVLVVGFGTDESG------EDYWLVKNSWGTTWGDK 317

Query: 341 GYYKICMGR-NVCGVDSMVS 359
           G+ K+   + N CG+ S  S
Sbjct: 318 GFIKMLRNKENQCGIASASS 337


>gi|30023547|gb|AAO48766.2| cathepsin L-like cysteine proteinase [Tenebrio molitor]
          Length = 337

 Score =  213 bits (543), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 131/323 (40%), Positives = 177/323 (54%), Gaps = 26/323 (8%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRR-AKRRQLLDPTAVH---GVTKFSDLT 105
           +  +  FK   +K Y ++ E  +R ++F  N    AK  +L     V    G+ K++D+ 
Sbjct: 24  QEQWGAFKMTHNKQYQSETEERFRMKIFMENSHTVAKHNKLYAQGLVSFKLGINKYADML 83

Query: 106 PSEFRRQFLGLNRR---LRLPADAQKAPILPTND--LPTDFDWRDHGAVTGVKDQGACGS 160
             EF +   G NR    LR          LP  +  LP   DWRD GAVT VKDQG CGS
Sbjct: 84  HHEFVQVLNGFNRTKSGLRSGESDDSVTFLPPANVQLPGQIDWRDKGAVTPVKDQGQCGS 143

Query: 161 CWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYI 220
           CWSFSATG+LEG HF  +G+LVSLSEQ LVDC      E+ G  ++GCNGGLM++AF YI
Sbjct: 144 CWSFSATGSLEGQHFRQSGKLVSLSEQNLVDC-----SEKFG--NNGCNGGLMDNAFRYI 196

Query: 221 LKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGI 280
              GG++ E+ YPY   D       K+K A       + S +ED++ + +   GP++V I
Sbjct: 197 KANGGIDTEQAYPYKAEDEKCHYKPKNKGATDRGYVDIESGNEDKLQSAVATVGPVSVAI 256

Query: 281 NAVW--MQTYIGGVSC-PYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENW 337
           +A     Q Y GGV   P      LDHGVL+VGYG+            YW++KNSWG++W
Sbjct: 257 DASHQSFQLYSGGVYYEPDCSASQLDHGVLVVGYGTEDDGT------DYWLVKNSWGKSW 310

Query: 338 GENGYYKICMGR-NVCGVDSMVS 359
           G+ GY K+   R N CG+ +  S
Sbjct: 311 GDQGYIKMARNRNNNCGIATEAS 333


>gi|1134882|emb|CAA92583.1| cysteine protease [Pisum sativum]
          Length = 350

 Score =  213 bits (543), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 138/359 (38%), Positives = 199/359 (55%), Gaps = 35/359 (9%)

Query: 8   SLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHH---FSLFKSKFSKTY 64
           SLL++L     A+A     D   IR V  SD E+    ++    H   F+ F +++ K Y
Sbjct: 5   SLLIVLFCVASAAAGFSFHDSNPIRMV--SDVEEQLLQVIGESRHAVSFARFANRYGKRY 62

Query: 65  ATQEEHDYRFRVFKANL---RRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLR 121
            + +E   RF++F  NL   R + +R+L   +   GV  F+D T  EFR   LG  +   
Sbjct: 63  DSVDEMKLRFKIFSENLELIRSSNKRRL---SYKLGVNHFADWTWEEFRSHRLGAAQNC- 118

Query: 122 LPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGEL 181
             A  +    +   +LP + DWR  G V+GVKDQG+CGSCW+FS TGALE A+  + G+ 
Sbjct: 119 -SATLKGNHKITDANLPDEKDWRKEGIVSGVKDQGSCGSCWTFSTTGALESAYAQAFGKN 177

Query: 182 VSLSEQQLVDCDHECDPEESGSCDS-GCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGG 240
           +SLSEQQLVDC        +G+ ++ GC+GGL + AFEYI   GG+E E+ YPYTG++ G
Sbjct: 178 ISLSEQQLVDC--------AGAFNNFGCSGGLPSQAFEYIKYNGGLETEEAYPYTGSN-G 228

Query: 241 SCKFDKSKIAAAV-SNFSVISSDEDQMAANLVKHGPLAVGINAVW-MQTYIGGVSCPYIC 298
            CKF    +A  V  + ++    ED++   +    P++V    V   + Y  GV     C
Sbjct: 229 LCKFRSEHVAVKVLGSVNITLGAEDELKHAIAFARPVSVAFEVVHDFRLYKSGVYTSTAC 288

Query: 299 GKY---LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGV 354
           G     ++H VL VGYG            PYW+IKNSWG +WG++GY+K+ MG+N+CGV
Sbjct: 289 GSTPMDVNHAVLAVGYGIE-------DGIPYWLIKNSWGGDWGDHGYFKMEMGKNMCGV 340


>gi|146216000|gb|ABQ10202.1| cysteine protease Cp4 [Actinidia deliciosa]
          Length = 463

 Score =  213 bits (543), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 121/309 (39%), Positives = 171/309 (55%), Gaps = 29/309 (9%)

Query: 62  KTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLR 121
           K Y    E + RF +FK NLR       +  +   G+ +F+DLT  E+R  FLG N  ++
Sbjct: 56  KAYNAIGEKERRFEIFKDNLRFVDEHNAVAGSYRVGLNRFADLTNEEYRSMFLGGNMEMK 115

Query: 122 LPADAQKA---PILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLST 178
             + + K+        + LP   DWR+ GAV+ VKDQG CGSCW+FS   A+EG + + T
Sbjct: 116 ERSASTKSDRYAFRAGDKLPGSVDWREKGAVSPVKDQGQCGSCWAFSTISAVEGINQIVT 175

Query: 179 GELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTD 238
           GEL+SLSEQ+LVDCD         S + GCNGGLM+  F++I+  GG++ E+DYPY   D
Sbjct: 176 GELISLSEQELVDCDK--------SYNMGCNGGLMDYGFQFIINNGGIDTEEDYPYRAVD 227

Query: 239 GGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSCPY 296
           G   +F K+    +++ +  +  D++      V + P++V I A     Q Y  GV   +
Sbjct: 228 GTCDQFRKNARVVSINGYEDVPEDDENSLKKAVANQPVSVAIEAGGRAFQLYESGVFTGH 287

Query: 297 ICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNV----- 351
            CG  LDHGV+ VGYG+            YW ++NSWG  WGENGY K  + RN+     
Sbjct: 288 -CGTNLDHGVVAVGYGTENGV-------DYWTVRNSWGPKWGENGYIK--LERNINATSG 337

Query: 352 -CGVDSMVS 359
            CG+ SM S
Sbjct: 338 KCGIASMAS 346


>gi|116242316|gb|ABJ89815.1| putative cathepsin L preprotein [Clonorchis sinensis]
          Length = 371

 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 133/323 (41%), Positives = 176/323 (54%), Gaps = 44/323 (13%)

Query: 56  FKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLL----DPTAVHGVTKFSDLTPSEFR- 110
           F  K+ + Y ++ E + R  +F  N  R     LL    + +   G+  FSD T SE   
Sbjct: 70  FLEKYKRVYDSKLEEERRLGIFTENFIRISEHNLLFEKGEVSYSMGINAFSDKTNSELDV 129

Query: 111 -RQFLGLNRRLR-----LPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSF 164
            R F   ++  R     +P DA  AP       P + DWR  GAVT VK+QG CGSCW+F
Sbjct: 130 LRGFRHSSKASRSGSQYIPFDA--AP-------PAEVDWRTKGAVTPVKNQGDCGSCWAF 180

Query: 165 SATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAG 224
           SATG +EG H+L+TG+LVSLSEQQLVDC          S + GC+GGLM+ AFEY+ +  
Sbjct: 181 SATGGIEGQHYLATGKLVSLSEQQLVDCS---------SSNDGCDGGLMDLAFEYVKEHK 231

Query: 225 GVEREKDYPYTGTDGG---SCKFDKSKIAAAVSNFSVISSDEDQMAANLVK-HGPLAVGI 280
           G++ E  YPY   + G    C FD    A  V+ +  I   ++ +    V  HGP++VGI
Sbjct: 232 GIDTEVHYPYVSGNTGYARQCSFDPKYAAVNVTGYVDIPEGQELLLQQAVGFHGPISVGI 291

Query: 281 NAVW--MQTYIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENW 337
           NA       Y  G+   + C  + LDHGVL+VGYG            PYW+IKNSWGE+W
Sbjct: 292 NAGLPSFMAYESGIYSDHRCNPHDLDHGVLVVGYGVDNGV-------PYWLIKNSWGEDW 344

Query: 338 GENGYYKICMGR-NVCGVDSMVS 359
           GENGY +I     N+CGV +M S
Sbjct: 345 GENGYVRILRNHNNLCGVATMAS 367


>gi|195484843|ref|XP_002090843.1| GE12574 [Drosophila yakuba]
 gi|194176944|gb|EDW90555.1| GE12574 [Drosophila yakuba]
          Length = 341

 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 134/320 (41%), Positives = 175/320 (54%), Gaps = 30/320 (9%)

Query: 56  FKSKFSKTYATQEEHDYRFRVFKANLRR-AKRRQLLDPTAVH---GVTKFSDLTPSEFRR 111
           FK +  K Y    E  +R ++F  N  + AK  Q      V     V K++DL   EFR+
Sbjct: 32  FKLEHRKNYQDDTEERFRLKIFNENKHKIAKHNQRFAEGKVSFKLAVNKYADLLHHEFRQ 91

Query: 112 QFLGLN----RRLRLPADAQKAP--ILPTN-DLPTDFDWRDHGAVTGVKDQGACGSCWSF 164
              G N    ++LR   D+ K    I P +  LP   DWR  GAVT VKDQG CGSCW+F
Sbjct: 92  LMNGFNYTLHKQLRATDDSFKGVTFISPAHVTLPKSVDWRSKGAVTAVKDQGHCGSCWAF 151

Query: 165 SATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAG 224
           S+TGALEG HF  +G LVSLSEQ LVDC        +   ++GCNGGLM++AF YI   G
Sbjct: 152 SSTGALEGQHFRKSGVLVSLSEQNLVDC-------STKYGNNGCNGGLMDNAFRYIKDNG 204

Query: 225 GVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVI-SSDEDQMAANLVKHGPLAVGINAV 283
           G++ EK YPY   D  SC F+K  I A    F+ I   DE +MA  +   GP++V I+A 
Sbjct: 205 GIDTEKSYPYEAID-DSCHFNKGTIGATDRGFTDIPQGDEKKMAEAVATVGPVSVAIDAS 263

Query: 284 W--MQTYIGGV-SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGEN 340
               Q Y  GV + P    + LDHGVL+VG+G+            YW++KNSWG  WG+ 
Sbjct: 264 HESFQFYSEGVYNEPQCDAQNLDHGVLVVGFGTDESGD------DYWLVKNSWGTTWGDK 317

Query: 341 GYYKICMGR-NVCGVDSMVS 359
           G+ K+   + N CG+ S  S
Sbjct: 318 GFIKMLRNKDNQCGIASASS 337


>gi|414585111|tpg|DAA35682.1| TPA: cysteine proteinase Mir3 [Zea mays]
          Length = 468

 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 127/327 (38%), Positives = 180/327 (55%), Gaps = 34/327 (10%)

Query: 35  VPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTA 94
           + S GE+S++    A   ++ + +   +TY    E + R++VF+ NLR            
Sbjct: 31  IVSYGERSDEE---ARRMYAEWMAAHGRTYNAVGEEERRYQVFRDNLRYIDAHNAAADAG 87

Query: 95  VH----GVTKFSDLTPSEFRRQFLGL----NRRLRLPADAQKAPILPTNDLPTDFDWRDH 146
           VH    G+ +F+DLT  E+R  +LG      R  +L A    A      DLP   DWR  
Sbjct: 88  VHSFRLGLNRFADLTNDEYRATYLGARTRPQRERKLGARYHAAD---NEDLPESVDWRAK 144

Query: 147 GAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDS 206
           GAV  VKDQG+CGSCW+FS   A+EG + + TG+L+SLSEQ+LVDCD         S + 
Sbjct: 145 GAVAEVKDQGSCGSCWAFSTIAAVEGINQIVTGDLISLSEQELVDCDT--------SYNQ 196

Query: 207 GCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQM 266
           GCNGGLM+ AFE+I+  GG++ EKDYPY GTDG      K+     + ++  + +++++ 
Sbjct: 197 GCNGGLMDYAFEFIINNGGIDTEKDYPYKGTDGRCDVNRKNAKVVTIDSYEDVPANDEKS 256

Query: 267 AANLVKHGPLAVGINA--VWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEK 324
               V + P++V I A     Q Y  G+     CG  LDHGV  VGYG+          K
Sbjct: 257 LQKAVANQPVSVAIEAAGTAFQLYSSGIFTG-SCGTALDHGVTAVGYGTE-------NGK 308

Query: 325 PYWIIKNSWGENWGENGYYKICMGRNV 351
            YWI+KNSWG +WGE+GY +  M RN+
Sbjct: 309 DYWIVKNSWGSSWGESGYVR--MERNI 333


>gi|226496089|ref|NP_001149658.1| cysteine protease 1 precursor [Zea mays]
 gi|195629242|gb|ACG36262.1| cysteine protease 1 precursor [Zea mays]
          Length = 469

 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 124/324 (38%), Positives = 178/324 (54%), Gaps = 28/324 (8%)

Query: 35  VPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTA 94
           + S GE+SE+    A   ++ + +   +TY    E + RF VF+ NLR            
Sbjct: 31  IVSYGERSEEE---ARRMYAEWMAAHGRTYNAVGEEERRFEVFRDNLRYVDAHNAAADAG 87

Query: 95  VH----GVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTN-DLPTDFDWRDHGAV 149
           VH    G+ +F+DLT  E+R  +LG+  R +         +   N DLP   DWR  GAV
Sbjct: 88  VHSFRLGLNRFADLTNDEYRATYLGVRSRPQRERRLGDRYLAGDNEDLPESVDWRAKGAV 147

Query: 150 TGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCN 209
             +KDQG+CGSCW+FS   A+EG + + TG+++SLSEQ+LVDCD         S + GCN
Sbjct: 148 AEIKDQGSCGSCWAFSTIAAVEGINQIVTGDMISLSEQELVDCDT--------SYNQGCN 199

Query: 210 GGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAAN 269
           GGLM+ AFE+I+  GG++ E+DYPY GTDG      K+     + ++  + ++ ++    
Sbjct: 200 GGLMDYAFEFIINNGGIDTEEDYPYKGTDGRCDVNRKNAKVVTIDSYEDVPANSEKSLQK 259

Query: 270 LVKHGPLAVGINA--VWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYW 327
            V + P++V I A     Q Y  G+     CG  LDHGV  VGYG+          K YW
Sbjct: 260 AVANQPISVAIEAGGRAFQLYNSGIFTG-TCGTALDHGVTAVGYGTE-------NGKDYW 311

Query: 328 IIKNSWGENWGENGYYKICMGRNV 351
           I+KNSWG +WGE+GY +  M RN+
Sbjct: 312 IVKNSWGSSWGESGYVR--MERNI 333


>gi|157864855|ref|XP_001681136.1| cathepsin L-like protease [Leishmania major strain Friedlin]
 gi|68124430|emb|CAJ02286.1| cathepsin L-like protease [Leishmania major strain Friedlin]
          Length = 348

 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 127/312 (40%), Positives = 172/312 (55%), Gaps = 32/312 (10%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           F  FK  + + Y T  E   R   F+ NL   +  Q  +P A  G+TKF DL+ +EF  +
Sbjct: 38  FEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 113 FLGLNRRLRLPADAQKA------PILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSA 166
           +L  N      A  Q A           + +P   DWR+ GAVT VK+QGACGSCW+FSA
Sbjct: 98  YL--NGAAYFAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSCWAFSA 155

Query: 167 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK--AG 224
            G +E    ++  +LV LSEQQLV CDH          D+GC GGLM  AFE++L+   G
Sbjct: 156 VGNIESQWAVAGHKLVRLSEQQLVSCDH---------VDNGCGGGLMLQAFEWVLRNMNG 206

Query: 225 GVEREKDYPYTGTDGG--SCKFDKSKIA--AAVSNFSVISSDEDQMAANLVKHGPLAVGI 280
            V  EK YPY   +G    C  + S++A  A +  +  + S E  M A L K+GP+++ +
Sbjct: 207 TVFTEKSYPYVSGNGDVPECS-NSSELAPGARIDGYVSMESSERVMTAWLAKNGPISIAV 265

Query: 281 NAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGEN 340
           +A    +Y  GV    I G+ L+HGVL+VGY  +G       E PYW+IKNSWGE+WGE 
Sbjct: 266 DASSFMSYHSGVLTSCI-GEQLNHGVLLVGYNMTG-------EVPYWVIKNSWGEDWGEK 317

Query: 341 GYYKICMGRNVC 352
           GY ++ MG N C
Sbjct: 318 GYVRVTMGVNAC 329


>gi|402770501|gb|AFQ98385.1| cathepsin L [Rhipicephalus microplus]
          Length = 332

 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 136/321 (42%), Positives = 169/321 (52%), Gaps = 31/321 (9%)

Query: 52  HFSLFKSKFSKTYATQEEHDYRFRVFKAN-LRRAKRRQLLDPTAVH---GVTKFSDLTPS 107
            +  FK+   KTY +  E   RF++F  N L  AK         V    G+ +F DL   
Sbjct: 26  QWEAFKTTHKKTYQSHMEELLRFKIFTENSLIIAKHNAKYAKGLVSYKLGMNQFGDLLAH 85

Query: 108 EFRRQFLGLNRRLRLPADAQKAPILPTND--LPTDFDWRDHGAVTGVKDQGACGSCWSFS 165
           EF R F G +   R    +   P    ND  LP   DWR  GAVT VKDQG CGSCW+FS
Sbjct: 86  EFARIFNG-HHGTRKTGGSTFLPPANVNDSSLPKAVDWRKKGAVTPVKDQGQCGSCWAFS 144

Query: 166 ATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGG 225
           ATG+LEG HFL  GELVSLSEQ LVDC            ++GC GGLM  AF+YI    G
Sbjct: 145 ATGSLEGQHFLKNGELVSLSEQNLVDCSQSFG-------NNGCEGGLMEDAFKYIKANDG 197

Query: 226 VEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISS-DEDQMAANLVKHGPLAVGINAVW 284
           ++ EK YPY   D G C+F K  + A  + +  I +  ED +   +   GP++V I+A  
Sbjct: 198 IDTEKSYPYEAVD-GECRFKKEDVGATDTGYVEIKAGSEDDLKKAVATVGPISVAIDASH 256

Query: 285 --MQTYIGGV-SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENG 341
              Q Y  GV   P    + LDHGVL+VGYG  G        K YW++KNSW E+WG+ G
Sbjct: 257 SSFQLYSEGVYDEPECSSEDLDHGVLVVGYGVKG-------GKKYWLVKNSWAESWGDQG 309

Query: 342 YYKICMGR---NVCGVDSMVS 359
           Y  I M R   N CG+ S  S
Sbjct: 310 Y--ILMSRDNNNQCGIASQAS 328


>gi|255555337|ref|XP_002518705.1| cysteine protease, putative [Ricinus communis]
 gi|223542086|gb|EEF43630.1| cysteine protease, putative [Ricinus communis]
          Length = 471

 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 122/315 (38%), Positives = 173/315 (54%), Gaps = 23/315 (7%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           + ++  +  K Y    E + RF +FK NLR       +D +   G+ +F+DLT  E++  
Sbjct: 51  YEMWLVEHGKAYNALGEKEKRFEIFKDNLRFIDEHNSVDRSYKVGLNRFADLTNEEYKAM 110

Query: 113 FLG--LNRRLR-LPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGA 169
           FLG  + R+ R L   +Q+      +DLP + DWR+ GAV  VKDQG CGSCW+FS  GA
Sbjct: 111 FLGTKMERKNRFLGTRSQRYLFKDGDDLPENVDWREKGAVVPVKDQGQCGSCWAFSTVGA 170

Query: 170 LEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVERE 229
           +EG + + TGEL+SLSEQ+LVDCD         S + GCNGGLM+ AFE+I+  GG++ E
Sbjct: 171 VEGINQIVTGELISLSEQELVDCDK--------SYNQGCNGGLMDYAFEFIINNGGIDTE 222

Query: 230 KDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQT 287
           +DYPY  +D       K+     +  +  +  +++      V H P++V I A     Q 
Sbjct: 223 EDYPYKASDNICDPNRKNAKVVTIDGYEDVPENDENSLKKAVAHQPVSVAIEAGGRAFQL 282

Query: 288 YIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICM 347
           Y  GV     CG  LDHGV+ VGYG+            YWI++NSWG  WGE+GY +  M
Sbjct: 283 YKSGVFTGR-CGTELDHGVVAVGYGTENGV-------NYWIVRNSWGSAWGESGYIR--M 332

Query: 348 GRNVCGVDSMVSSVA 362
            RNV    +    +A
Sbjct: 333 ERNVANTKTGKCGIA 347


>gi|157864849|ref|XP_001681133.1| cathepsin L-like protease [Leishmania major strain Friedlin]
 gi|68124427|emb|CAJ02283.1| cathepsin L-like protease [Leishmania major strain Friedlin]
          Length = 348

 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 127/312 (40%), Positives = 173/312 (55%), Gaps = 32/312 (10%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           F  FK  + + Y T  E   R   F+ NL   +  Q  +P A  G+TKF DL+ +EF  +
Sbjct: 38  FEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 113 FLGLNRRLRLPADAQKA------PILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSA 166
           +L  N      A  Q A           + +P   DWR+ GAVT VK+QGACGSCW+FSA
Sbjct: 98  YL--NGAAYFAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSCWAFSA 155

Query: 167 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK--AG 224
            G +E    ++  +LV LSEQQLV CDH          D+GC GGLM  AFE++L+   G
Sbjct: 156 VGNIESQWAVAGHKLVRLSEQQLVSCDH---------VDNGCGGGLMLQAFEWVLRNMNG 206

Query: 225 GVEREKDYPYTGTDGG--SCKFDKSKIA--AAVSNFSVISSDEDQMAANLVKHGPLAVGI 280
            V  EK YPY   +G    C  + S++A  A +  +  + S E  MAA L K+GP+++ +
Sbjct: 207 TVFTEKSYPYVSGNGDVPECS-NSSELAPGARIDGYVSMESSERVMAAWLAKNGPISIAV 265

Query: 281 NAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGEN 340
           +A    +Y  GV    I G+ L+HGVL+VGY  +G       E PYW+IKNSWG++WGE 
Sbjct: 266 DASSFMSYHSGVLTSCI-GEQLNHGVLLVGYNMTG-------EVPYWVIKNSWGKDWGEK 317

Query: 341 GYYKICMGRNVC 352
           GY ++ MG N C
Sbjct: 318 GYVRVTMGVNAC 329


>gi|255522980|gb|ACU12382.1| RE21773p [Drosophila melanogaster]
          Length = 375

 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 132/320 (41%), Positives = 177/320 (55%), Gaps = 30/320 (9%)

Query: 56  FKSKFSKTYATQEEHDYRFRVFKANLRR-AKRRQLLDPTAVH---GVTKFSDLTPSEFRR 111
           FK +  K Y  + E  +R ++F  N  + AK  Q      V     V K++DL   EFR+
Sbjct: 66  FKLEHRKNYQDETEERFRLKIFNENKHKIAKHNQRFAEGKVSFKLAVNKYADLLHHEFRQ 125

Query: 112 QFLGLN----RRLRLPADAQKAP--ILPTN-DLPTDFDWRDHGAVTGVKDQGACGSCWSF 164
              G N    ++LR   ++ K    I P +  LP   DWR  GAVT VKDQG CGSCW+F
Sbjct: 126 LMNGFNYTLHKQLRAADESFKGVTFISPAHVTLPKSVDWRTKGAVTAVKDQGHCGSCWAF 185

Query: 165 SATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAG 224
           S+TGALEG HF  +G LVSLSEQ LVDC        +   ++GCNGGLM++AF YI   G
Sbjct: 186 SSTGALEGQHFRKSGVLVSLSEQNLVDC-------STKYGNNGCNGGLMDNAFRYIKDNG 238

Query: 225 GVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVI-SSDEDQMAANLVKHGPLAVGINAV 283
           G++ EK YPY   D  SC F+K  + A    F+ I   DE +MA  +   GP++V I+A 
Sbjct: 239 GIDTEKSYPYEAID-DSCHFNKGTVGATDRGFTDIPQGDEKKMAEAVATVGPVSVAIDAS 297

Query: 284 W--MQTYIGGV-SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGEN 340
               Q Y  GV + P    + LDHGVL+VG+G+          + YW++KNSWG  WG+ 
Sbjct: 298 HESFQFYSEGVYNEPQCDAQNLDHGVLVVGFGTDESG------EDYWLVKNSWGTTWGDK 351

Query: 341 GYYKICMGR-NVCGVDSMVS 359
           G+ K+   + N CG+ S  S
Sbjct: 352 GFIKMLRNKENQCGIASASS 371


>gi|344953542|gb|AEN28617.1| cathepsin L-like cysteine protease [Epinephelus coioides]
          Length = 336

 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 133/319 (41%), Positives = 175/319 (54%), Gaps = 24/319 (7%)

Query: 52  HFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH----GVTKFSDLTPS 107
           H+ L+KS  SK Y  +EE  +R  V++ NL++ +   L      H    G+  F D+T  
Sbjct: 27  HWELWKSWHSKKYHEKEE-GWRRMVWEKNLKKIELHNLEHSMGTHSYRLGMNHFGDMTHE 85

Query: 108 EFRRQFLGLNRRLRLPADAQKAPILPTNDL--PTDFDWRDHGAVTGVKDQGACGSCWSFS 165
           EFR+   G  R+      A+ +  L  N L  P   DWRD+G VT VKDQG CGSCW+FS
Sbjct: 86  EFRQLMNGYKRKAE--TKARGSLFLEPNFLEAPKSVDWRDNGYVTPVKDQGQCGSCWAFS 143

Query: 166 ATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGG 225
            TGALEG HF  TG+LVSLSEQ LVDC     PE     + GCNGGLM+ AF+Y+    G
Sbjct: 144 TTGALEGQHFRKTGKLVSLSEQNLVDCSR---PE----GNEGCNGGLMDQAFQYVKDNQG 196

Query: 226 VEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKH-GPLAVGINA-- 282
           ++ E  YPY GTD   C +D +  +   + F  I S +++     V   GP++V I+A  
Sbjct: 197 LDSEDSYPYLGTDDQPCHYDPTYNSVNDTGFVDIPSGKERALMKAVAAVGPVSVAIDAGH 256

Query: 283 VWMQTYIGGVSCPYIC-GKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENG 341
              Q Y  G+     C  + LDHGVL+VGY   GF       K YWI+KNSW E WG+ G
Sbjct: 257 ESFQFYQSGIYYEKECSSEELDHGVLVVGY---GFQGEDVDGKKYWIVKNSWSEKWGDKG 313

Query: 342 YYKICMGR-NVCGVDSMVS 359
           Y  +   R N CG+ +  S
Sbjct: 314 YIYMAKDRKNHCGIATAAS 332


>gi|449454309|ref|XP_004144898.1| PREDICTED: xylem cysteine proteinase 1-like [Cucumis sativus]
 gi|449471311|ref|XP_004153272.1| PREDICTED: xylem cysteine proteinase 1-like [Cucumis sativus]
          Length = 349

 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 130/359 (36%), Positives = 189/359 (52%), Gaps = 37/359 (10%)

Query: 12  LLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKS---KFSKTYATQE 68
           L+LS+ L    A   D +++          S +HL + +    LF+S   K SK Y + E
Sbjct: 11  LILSATLFITYATAHDFSIVGY--------SPEHLASMDKTIELFESWMSKHSKAYRSIE 62

Query: 69  EHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQK 128
           E  +RF +F  NL+          +   G+ +F+DL+  EF+ ++LGL         ++ 
Sbjct: 63  EKLHRFEIFLDNLKHIDETNKKVSSYWLGLNEFADLSHEEFKSKYLGLRVEFPRKRSSRG 122

Query: 129 APILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQ 188
                  DLP   DWR  GAVT VK+QG+CGSCW+FS   A+EG + + TG L SLSEQ+
Sbjct: 123 FSYGDVEDLPESVDWRTKGAVTPVKNQGSCGSCWAFSTVAAVEGINQIVTGNLTSLSEQE 182

Query: 189 LVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSK 248
           L+DCD         S ++GC GGLM+ AF+YI+   G+ +E+DYPY   +G   +  +  
Sbjct: 183 LIDCDR--------SFNNGCYGGLMDYAFQYIMSNSGLRKEEDYPYLMEEGRCIREKEQF 234

Query: 249 IAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKYLDHGV 306
               +S +  + ++++Q     + H P++V I A     Q Y GG+     CG  +DHGV
Sbjct: 235 EVVTISGYEDVPANDEQSLLKALSHQPVSVAIEASSRNFQFYKGGIFTGR-CGTQMDHGV 293

Query: 307 LIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRN------VCGVDSMVS 359
             VGYGSS       +   Y I+KNSWG  WGENGY  I M RN      +CG++ M S
Sbjct: 294 TAVGYGSS-------EGTDYIIVKNSWGPKWGENGY--IRMKRNTGKPEGLCGINQMAS 343


>gi|24653514|ref|NP_523735.2| cysteine proteinase-1, isoform C [Drosophila melanogaster]
 gi|118572624|sp|Q95029.2|CATL_DROME RecName: Full=Cathepsin L; AltName: Full=Cysteine proteinase 1;
           Contains: RecName: Full=Cathepsin L heavy chain;
           Contains: RecName: Full=Cathepsin L light chain; Flags:
           Precursor
 gi|21627209|gb|AAM68565.1| cysteine proteinase-1, isoform C [Drosophila melanogaster]
          Length = 371

 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 132/320 (41%), Positives = 177/320 (55%), Gaps = 30/320 (9%)

Query: 56  FKSKFSKTYATQEEHDYRFRVFKANLRR-AKRRQLLDPTAVH---GVTKFSDLTPSEFRR 111
           FK +  K Y  + E  +R ++F  N  + AK  Q      V     V K++DL   EFR+
Sbjct: 62  FKLEHRKNYQDETEERFRLKIFNENKHKIAKHNQRFAEGKVSFKLAVNKYADLLHHEFRQ 121

Query: 112 QFLGLN----RRLRLPADAQKAP--ILPTN-DLPTDFDWRDHGAVTGVKDQGACGSCWSF 164
              G N    ++LR   ++ K    I P +  LP   DWR  GAVT VKDQG CGSCW+F
Sbjct: 122 LMNGFNYTLHKQLRAADESFKGVTFISPAHVTLPKSVDWRTKGAVTAVKDQGHCGSCWAF 181

Query: 165 SATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAG 224
           S+TGALEG HF  +G LVSLSEQ LVDC        +   ++GCNGGLM++AF YI   G
Sbjct: 182 SSTGALEGQHFRKSGVLVSLSEQNLVDCS-------TKYGNNGCNGGLMDNAFRYIKDNG 234

Query: 225 GVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVI-SSDEDQMAANLVKHGPLAVGINAV 283
           G++ EK YPY   D  SC F+K  + A    F+ I   DE +MA  +   GP++V I+A 
Sbjct: 235 GIDTEKSYPYEAID-DSCHFNKGTVGATDRGFTDIPQGDEKKMAEAVATVGPVSVAIDAS 293

Query: 284 W--MQTYIGGV-SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGEN 340
               Q Y  GV + P    + LDHGVL+VG+G+          + YW++KNSWG  WG+ 
Sbjct: 294 HESFQFYSEGVYNEPQCDAQNLDHGVLVVGFGTDESG------EDYWLVKNSWGTTWGDK 347

Query: 341 GYYKICMGR-NVCGVDSMVS 359
           G+ K+   + N CG+ S  S
Sbjct: 348 GFIKMLRNKENQCGIASASS 367


>gi|109390302|gb|ABG33750.1| cysteine protease [Hevea brasiliensis]
          Length = 457

 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 131/352 (37%), Positives = 190/352 (53%), Gaps = 35/352 (9%)

Query: 9   LLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQS----EDHLLNAEHHFSLFKSKFSKTY 64
            +LL  +S L+SA      D  I     S G +S    +D ++     + +   K  K Y
Sbjct: 2   FMLLFFASTLSSA-----SDLSIISYDQSHGTKSSWRTDDEVMAIYEDWLV---KHGKAY 53

Query: 65  ATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGL---NRRLR 121
            +  E + RF VFK NLR        + T   G+ +F+DLT  E+R  +LG     RR +
Sbjct: 54  NSLGEKERRFEVFKDNLRFIDEHNSENRTYRVGLNRFADLTNEEYRSMYLGALSGIRRNK 113

Query: 122 LPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGEL 181
           L   + +      + LP   DWR  GAV GVKDQG+CGSCW+FSA  A+EG + + TG+L
Sbjct: 114 LRKISDRYTPRVGDSLPDSVDWRKEGAVVGVKDQGSCGSCWAFSAVAAVEGINKIVTGDL 173

Query: 182 VSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGS 241
           +SLSEQ+LVDCD+        S + GCNGGLM+  FE+I+  GG++ E+DYPY   DG  
Sbjct: 174 ISLSEQELVDCDN--------SYNEGCNGGLMDYGFEFIINNGGIDSEEDYPYLARDGRC 225

Query: 242 CKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICG 299
             + K+    ++ ++  +  + +      V + P++V I A     Q Y  GV     CG
Sbjct: 226 DTYRKNARVVSIDSYEDVPVNNEAALQKAVANQPVSVAIEAGGRDFQLYSSGVFSGR-CG 284

Query: 300 KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNV 351
             LDHGV+ VGYG+          + YWI++NSWG++WGE+GY +  M RN+
Sbjct: 285 TALDHGVVAVGYGTE-------NGQDYWIVRNSWGKSWGESGYLR--MARNI 327


>gi|1749812|emb|CAA90237.1| cysteine proteinase LmCPB1 [Leishmania mexicana]
          Length = 359

 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 132/333 (39%), Positives = 178/333 (53%), Gaps = 35/333 (10%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           F  FK  + + Y T  E   R   F+ NL   +  Q  +P A  G+TKF DL+ +EF  +
Sbjct: 38  FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFCAR 97

Query: 113 FLGLNRRLRLPADAQKAPI------LPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSA 166
           +L  N      A  +  P          + +P   DWR+ GAVT VKDQGACGSCW+FSA
Sbjct: 98  YL--NGAAYFAAAKRHTPQHYPKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAFSA 155

Query: 167 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK--AG 224
            G +EG  +L+  ELVSLSEQQLV CD   D         GC+GGLM  AF+++L+   G
Sbjct: 156 VGNIEGQWYLAGHELVSLSEQQLVSCDDMND---------GCDGGLMLQAFDWLLQNTNG 206

Query: 225 GVEREKDYPYTGTDGGSCKFDKSK---IAAAVSNFSVISSDEDQMAANLVKHGPLAVGIN 281
            +  E  YPY   +G   +   S    + A +    +I S E  MAA L K+GP+A+ ++
Sbjct: 207 HLYTEDSYPYVSGNGYLPECSNSSKLVVGAQIDGHVLIGSSEKAMAAWLAKNGPIAIALD 266

Query: 282 AVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENG 341
           A    +Y  GV    I GK ++H VL+VGY  +G       E PYW+IKNSWG +WGE G
Sbjct: 267 ASSFMSYKSGVLTACI-GKQVNHAVLLVGYDMTG-------EVPYWVIKNSWGGDWGEQG 318

Query: 342 YYKICMGRNVC-----GVDSMVSSVAAIHTTSS 369
           Y ++ MG N C      V + V   AA  T++S
Sbjct: 319 YVRVVMGVNACLLSEYPVSAHVRESAAPGTSTS 351


>gi|356553978|ref|XP_003545327.1| PREDICTED: cysteine proteinase RD21a-like [Glycine max]
          Length = 496

 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 128/349 (36%), Positives = 193/349 (55%), Gaps = 30/349 (8%)

Query: 4   LILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKT 63
           + ++++LLL     ++SA+   D   +      +   +S++ L++    + +   K  K 
Sbjct: 36  MAMATILLLFTVFAVSSAL---DMSIISYDNAHAATSRSDEELMSMYEQWLV---KHGKV 89

Query: 64  YATQEEHDYRFRVFKANLRRAK-RRQLLDPTAVHGVTKFSDLTPSEFRRQFLGL----NR 118
           Y    E + RF++FK NLR         D T   G+ +F+DLT  E+R ++LG     NR
Sbjct: 90  YNALGEKEKRFQIFKDNLRFIDDHNSQEDRTYKLGLNRFADLTNEEYRAKYLGTKIDPNR 149

Query: 119 RLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLST 178
           RL      + AP +  + LP   DWR  GAV  VKDQG CGSCW+FSA GA+EG + + T
Sbjct: 150 RLGKTPSNRYAPRV-GDKLPESVDWRKEGAVPPVKDQGGCGSCWAFSAIGAVEGINKIVT 208

Query: 179 GELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTD 238
           GEL+SLSEQ+LVDCD           + GCNGGLM+ AFE+I+  GG++ E+DYPY G D
Sbjct: 209 GELISLSEQELVDCDT--------GYNEGCNGGLMDYAFEFIINNGGIDSEEDYPYRGVD 260

Query: 239 GGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGIN--AVWMQTYIGGVSCPY 296
           G    + K+    ++ ++  + + ++      V + P++V I       Q Y+ GV    
Sbjct: 261 GRCDTYRKNAKVVSIDDYEDVPAYDELALKKAVANQPVSVAIEGGGREFQLYVSGVFTGR 320

Query: 297 ICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKI 345
            CG  LDHGV+ VGYG++           YWI++NSWG +WGE+GY ++
Sbjct: 321 -CGTALDHGVVAVGYGTA-------NGHDYWIVRNSWGPSWGEDGYIRL 361


>gi|118123|sp|P25782.1|CYSP2_HOMAM RecName: Full=Digestive cysteine proteinase 2; Flags: Precursor
 gi|11053|emb|CAA45128.1| cysteine proteinase preproenzyme [Homarus americanus]
          Length = 323

 Score =  213 bits (541), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 131/323 (40%), Positives = 171/323 (52%), Gaps = 25/323 (7%)

Query: 46  LLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRA----KRRQLLDPTAVHGVTKF 101
           L  A   +  FK K+ + Y   EE  YR  +F+ N +      K+ +  + T    + KF
Sbjct: 13  LAAASPSWEHFKGKYGRQYVDAEEDSYRRVIFEQNQKYIEEFNKKYENGEVTFNLAMNKF 72

Query: 102 SDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSC 161
            D+T  EF     G   R   P      P   T    T+ DWR  GAVT VKDQG CGSC
Sbjct: 73  GDMTLEEFNAVMKGNIPRRSAPVSV-FYPKKETGPQATEVDWRTKGAVTPVKDQGQCGSC 131

Query: 162 WSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYIL 221
           W+FS TG+LEG HFL TG L+SL+EQQLVDC     P+       GCNGG MN AF+YI 
Sbjct: 132 WAFSTTGSLEGQHFLKTGSLISLAEQQLVDCSRPYGPQ-------GCNGGWMNDAFDYIK 184

Query: 222 KAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKH-GPLAVGI 280
              G++ E  YPY   D GSC+FD + +AA  S  + I+S  +      V+  GP++V I
Sbjct: 185 ANNGIDTEAAYPYEARD-GSCRFDSNSVAATCSGHTNIASGSETGLQQAVRDIGPISVTI 243

Query: 281 NAVW--MQTYIGGVSCPYICG-KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENW 337
           +A     Q Y  GV     C   YLDH VL VGYGS G        + +W++KNSW  +W
Sbjct: 244 DAAHSSFQFYSSGVYYEPSCSPSYLDHAVLAVGYGSEG-------GQDFWLVKNSWATSW 296

Query: 338 GENGYYKICMGR-NVCGVDSMVS 359
           G+ GY K+   R N CG+ ++ S
Sbjct: 297 GDAGYIKMSRNRNNNCGIATVAS 319


>gi|156399477|ref|XP_001638528.1| predicted protein [Nematostella vectensis]
 gi|156225649|gb|EDO46465.1| predicted protein [Nematostella vectensis]
          Length = 325

 Score =  213 bits (541), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 127/318 (39%), Positives = 175/318 (55%), Gaps = 22/318 (6%)

Query: 47  LNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTP 106
           L+ +  +  +K    KTY T EE D R  ++  NL   K+    + +    +  F+DLT 
Sbjct: 21  LSQDRQWHAWKDFHGKTY-TGEEEDLRRAIWNDNLEIVKKHNAENHSYKLDMNHFADLTV 79

Query: 107 SEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSA 166
           +EF+++F+G          +   P L    LP + DWRD G VT VK+QG CGSCW+FS+
Sbjct: 80  TEFKQRFMGYRAASNSTGGSTFLP-LSNVQLPAEVDWRDKGFVTAVKNQGQCGSCWAFSS 138

Query: 167 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGV 226
           TG+LEG HF  TG+LVSLSEQ LVDC  +         ++GC GGLM+ AF+YI    G+
Sbjct: 139 TGSLEGQHFRKTGKLVSLSEQNLVDCSKKYG-------NNGCEGGLMDYAFKYIKNNDGI 191

Query: 227 EREKDYPYTGTDGGSCKFDKSKIAAAVSNFS-VISSDEDQMAANLVKHGPLAVGINA--V 283
           + E+ YPYT  D G C F    + A V+ ++ V    E  + + +   GP++V I+A   
Sbjct: 192 DTEQSYPYTARD-GQCHFKPGSVGATVTGYTDVQRGSEGDLQSAVATVGPISVAIDAGHS 250

Query: 284 WMQTYIGGV-SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGY 342
             Q Y  GV S P      LDHGVL VGYG+          K YW++KNSWGE WG NGY
Sbjct: 251 SFQLYKTGVYSEPDCSSTQLDHGVLAVGYGAE-------DGKDYWLVKNSWGEGWGMNGY 303

Query: 343 YKICMGR-NVCGVDSMVS 359
            K+   + N CG+ +  S
Sbjct: 304 IKMSRNKDNQCGIATQAS 321


>gi|394331816|gb|AFN27127.1| cysteine protease [Leishmania tropica]
          Length = 443

 Score =  213 bits (541), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 128/313 (40%), Positives = 168/313 (53%), Gaps = 34/313 (10%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           F  FK  + + Y T  E   R   F+ NL   +  Q  +P A  G+TKF DL+ +EF  +
Sbjct: 38  FEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 113 FLGLNRRLRLPADAQKA------PILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSA 166
           +L  N      A  Q A           + +P   DWR  GAVT VKDQGACGSCW+FSA
Sbjct: 98  YL--NGAAYFAAAKQHAGQHYRKARADLSAVPDAVDWRKKGAVTPVKDQGACGSCWAFSA 155

Query: 167 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK--AG 224
            G++E    L+   L +LSEQQLV CD +         D+GC GGLM  AFE++L+   G
Sbjct: 156 VGSIESQWALAGHRLTALSEQQLVSCDDK---------DNGCAGGLMLQAFEWLLRNMNG 206

Query: 225 GVEREKDYPYTGTDG--GSCKFDKSKIAAA-VSNFSVISSDEDQMAANLVKHGPLAVGIN 281
            +  E  YPY  + G    C      +  A +  +  I S E  MAA L K+GP+++ ++
Sbjct: 207 TMFTEDSYPYVSSTGYVPECSNSSQLVPGARIDGYLTIESSETVMAAWLAKNGPISIAVD 266

Query: 282 AVWMQTYIGGV--SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGE 339
           A    +Y  GV  SC    G  L+HGVL+VGY  +G       E PYW+IKNSWGENWGE
Sbjct: 267 ASSFMSYQSGVLTSC---AGDALNHGVLLVGYNRTG-------EVPYWVIKNSWGENWGE 316

Query: 340 NGYYKICMGRNVC 352
           NGY ++ MG N C
Sbjct: 317 NGYVRVTMGVNAC 329


>gi|402770503|gb|AFQ98386.1| cathepsin L [Rhipicephalus microplus]
          Length = 332

 Score =  213 bits (541), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 136/321 (42%), Positives = 170/321 (52%), Gaps = 31/321 (9%)

Query: 52  HFSLFKSKFSKTYATQEEHDYRFRVFKAN-LRRAKRRQLLDPTAVH---GVTKFSDLTPS 107
            +  FK+   KTY +  E   RF++F  N L  AK         V    G+ +F DL   
Sbjct: 26  QWEAFKTTHKKTYQSHMEELLRFKIFTENSLIIAKHNAKYAKGLVSYKLGMNQFGDLLAH 85

Query: 108 EFRRQFLGLNRRLRLPADAQKAPILPTND--LPTDFDWRDHGAVTGVKDQGACGSCWSFS 165
           EF R F G +   R    +   P    ND  LP   DWR  GAVT VKDQG CGSCW+FS
Sbjct: 86  EFARIFNG-HHGTRKTGGSTFLPPANVNDSSLPKVVDWRKKGAVTPVKDQGQCGSCWAFS 144

Query: 166 ATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGG 225
           ATG+LEG HFL  GELVSLSEQ LVDC            ++GC GGLM  AF+YI +  G
Sbjct: 145 ATGSLEGRHFLKNGELVSLSEQNLVDCSQSFG-------NNGCEGGLMEDAFKYIKENDG 197

Query: 226 VEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISS-DEDQMAANLVKHGPLAVGINAVW 284
           ++ EK YPY   D G C+F K  + A  + +  I +  ED +   +   GP++V I+A  
Sbjct: 198 IDTEKSYPYEAVD-GECRFKKEDVGATDTGYVEIKAGSEDDLKKAVATVGPISVAIDASH 256

Query: 285 --MQTYIGGV-SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENG 341
              Q Y  GV   P    + LDHGVL+VGYG  G        K YW++KNSW E+WG+ G
Sbjct: 257 SSFQLYSEGVYDEPECSSEDLDHGVLVVGYGVKG-------GKKYWLVKNSWAESWGDQG 309

Query: 342 YYKICMGR---NVCGVDSMVS 359
           Y  I M R   N CG+ S  S
Sbjct: 310 Y--ILMSRDNNNQCGIASQAS 328


>gi|168057475|ref|XP_001780740.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162667829|gb|EDQ54449.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 463

 Score =  213 bits (541), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 135/355 (38%), Positives = 190/355 (53%), Gaps = 46/355 (12%)

Query: 3   RLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQ--SEDHLLNAEHHFSLFKSKF 60
           R +  SL+LL++      A+    D      +V  +G Q  S+D +L+  H +       
Sbjct: 6   RALGLSLVLLVI------AIGQQADAGRANAIVDYEGNQLHSDDAILDVFHQWL---ETH 56

Query: 61  SKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLG---LN 117
           S+ Y +  E  +RF++FK N            +   G+ KFSDLT  EFR Q+LG   +N
Sbjct: 57  SRVYRSLSEKHHRFQIFKENFLYIHAHNKQQKSYWLGLNKFSDLTHQEFRAQYLGTKPVN 116

Query: 118 RRLR----LPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGA 173
           R+ +    +  D +  P +         DWR  GAVT VKDQGACGSCW+FSA G++EG 
Sbjct: 117 RQRKEANFMYEDVEAEPKV---------DWRLKGAVTDVKDQGACGSCWAFSAVGSVEGV 167

Query: 174 HFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYP 233
           + + TGELVSLSEQ+LVDCD +         + GCNGGLM+ AFE+I+K GG++ EKDYP
Sbjct: 168 NAIKTGELVSLSEQELVDCDRK--------QNQGCNGGLMDYAFEFIIKNGGIDTEKDYP 219

Query: 234 YTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGG 291
           Y   DG   +  ++     + ++  + +  +      +   P++V I A     Q Y GG
Sbjct: 220 YKARDGRCDEGRRNSKVVVIDDYQDVPTQSESALMKALTKNPVSVAIEAGGRDFQHYQGG 279

Query: 292 V-SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKI 345
           V + P  CG  LDHGVL VGYG+            YWI+KNSWG  WGE GY ++
Sbjct: 280 VFTGP--CGSELDHGVLAVGYGTDDDGV------NYWIVKNSWGPGWGEKGYIRM 326


>gi|332326587|gb|AEE42617.1| cysteine protease [Leishmania aethiopica]
          Length = 443

 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 127/313 (40%), Positives = 167/313 (53%), Gaps = 34/313 (10%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           F  FK  + + Y T  E   R   F+ NL   +  Q  +P A  G+TKF DL+ +EF  +
Sbjct: 38  FEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 113 FLGLNRRLRLPADAQKA------PILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSA 166
           +L  N      A  Q A           + +P   DWR+ GAVT VKDQGACGSCW+FSA
Sbjct: 98  YL--NGAAYFAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAFSA 155

Query: 167 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK--AG 224
            G +E    ++   L +LSEQQLV CD +         DSGCNGGLM  AFE++L+   G
Sbjct: 156 VGNIESQWAVAGHRLTALSEQQLVSCDDK---------DSGCNGGLMTQAFEWLLRNMNG 206

Query: 225 GVEREKDYPYTGTDGG--SCKFDKSKIAAA-VSNFSVISSDEDQMAANLVKHGPLAVGIN 281
            +  E  YPY  + G    C      +  A +  +  I S E  MAA L K GP+++ ++
Sbjct: 207 TMLTEDSYPYVSSTGDVPECTNSSQLVPGARIDGYVTIESSETVMAAWLAKSGPISIAVD 266

Query: 282 AVWMQTYIGGV--SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGE 339
           A    +Y  GV  SC    G  L+HGVL+VGY  +G       E PYW+IKNSWGE+WGE
Sbjct: 267 ASSFMSYESGVLTSC---AGDALNHGVLLVGYNXTG-------EVPYWVIKNSWGEDWGE 316

Query: 340 NGYYKICMGRNVC 352
            GY ++ MG N C
Sbjct: 317 KGYVRVTMGVNAC 329


>gi|18141281|gb|AAL60578.1|AF454956_1 senescence-associated cysteine protease [Brassica oleracea]
          Length = 445

 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 128/309 (41%), Positives = 173/309 (55%), Gaps = 30/309 (9%)

Query: 62  KTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH-GVTKFSDLTPSEFRRQFLGLN-RR 119
           K Y    E D RF +F  NL+  +    +   +   G+T+F+DLT  EFR  +L     R
Sbjct: 46  KNYNGLGEKDKRFEIFMDNLKFVQEHNSVPNQSYELGLTRFADLTNEEFRAIYLRSKMER 105

Query: 120 LRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTG 179
            R    +++      + LP + DWR  GAV  VKDQG+CGSCW+FSA GA+EG + + TG
Sbjct: 106 TRDSVKSERYLHNVGDKLPDEVDWRAKGAVVPVKDQGSCGSCWAFSAIGAVEGINQIKTG 165

Query: 180 ELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDG 239
           ELVSLSEQ+LVDCD         S ++GC GGLM+ AF++I+  GG++ E+DYPYT TD 
Sbjct: 166 ELVSLSEQELVDCDT--------SYNNGCGGGLMDYAFQFIISNGGIDTEEDYPYTATDD 217

Query: 240 GSCKFDKSKI-AAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSCPY 296
             C  DK       +  +  +  +E+ +   L    P++V I A     Q Y  GV    
Sbjct: 218 NICNTDKKNTRVVTIDGYEDVPENENSLKKALANQ-PISVAIEAGGRGFQLYKSGVFTG- 275

Query: 297 ICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNV----- 351
            CG  LDHGV+ VGYG+S       + + YWII+NSWG NWGE+GY K  + RN+     
Sbjct: 276 TCGTALDHGVVAVGYGTS-------EGQDYWIIRNSWGSNWGESGYIK--LQRNIKDSSG 326

Query: 352 -CGVDSMVS 359
            CGV  M S
Sbjct: 327 KCGVAMMAS 335


>gi|14422331|emb|CAC41636.1| early leaf senescence abundant cysteine protease [Pisum sativum]
          Length = 350

 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 137/359 (38%), Positives = 199/359 (55%), Gaps = 35/359 (9%)

Query: 8   SLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHH---FSLFKSKFSKTY 64
           SLL++L     A+A     D   IR V  SD E+    ++    H   F+ F +++ K Y
Sbjct: 5   SLLIVLFCVASAAAGFSFHDSNPIRMV--SDVEEQLLQVIGESRHAVSFARFANRYGKRY 62

Query: 65  ATQEEHDYRFRVFKANL---RRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLR 121
            + +E   RF++F  N+   R + +R+L   +   GV  F+D T  EFR   LG  +   
Sbjct: 63  DSVDEMKLRFKIFSENIELIRSSNKRRL---SYKLGVNHFADWTWEEFRSHRLGAAQNC- 118

Query: 122 LPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGEL 181
             A  +    +   +LP + DWR  G V+GVKDQG+CGSCW+FS TGALE A+  + G+ 
Sbjct: 119 -SATLKGNHKITDANLPDEKDWRKEGIVSGVKDQGSCGSCWTFSTTGALESAYAQAFGKN 177

Query: 182 VSLSEQQLVDCDHECDPEESGSCDS-GCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGG 240
           +SLSEQQLVDC        +G+ ++ GC+GGL + AFEYI   GG+E E+ YPYTG++ G
Sbjct: 178 ISLSEQQLVDC--------AGAFNNFGCSGGLPSQAFEYIKYNGGLETEEAYPYTGSN-G 228

Query: 241 SCKFDKSKIAAAV-SNFSVISSDEDQMAANLVKHGPLAVGINAVW-MQTYIGGVSCPYIC 298
            CKF    +A  V  + ++    ED++   +    P++V    V   + Y  GV     C
Sbjct: 229 LCKFRSEHVAVKVLGSVNITLGAEDELKHAIAFARPVSVAFEVVHDFRLYKSGVYTSTAC 288

Query: 299 GKY---LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGV 354
           G     ++H VL VGYG            PYW+IKNSWG +WG++GY+K+ MG+N+CGV
Sbjct: 289 GSTPMDVNHAVLAVGYGIE-------DGIPYWLIKNSWGGDWGDHGYFKMEMGKNMCGV 340


>gi|394331814|gb|AFN27126.1| cysteine protease [Leishmania tropica]
          Length = 443

 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 128/313 (40%), Positives = 168/313 (53%), Gaps = 34/313 (10%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           F  FK  + + Y T  E   R   F+ NL   +  Q  +P A  G+TKF DL+ +EF  +
Sbjct: 38  FEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 113 FLGLNRRLRLPADAQKA------PILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSA 166
           +L  N      A  Q A           + +P   DWR  GAVT VKDQGACGSCW+FSA
Sbjct: 98  YL--NGAAYFAAAKQHAGQHYRKARADLSAVPYAVDWRKKGAVTPVKDQGACGSCWAFSA 155

Query: 167 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK--AG 224
            G++E    L+   L +LSEQQLV CD +         DSGC GGLM  AFE++L+   G
Sbjct: 156 VGSIESQWALAGHRLTALSEQQLVSCDDK---------DSGCGGGLMLQAFEWLLRNMNG 206

Query: 225 GVEREKDYPYTGTDG--GSCKFDKSKIAAA-VSNFSVISSDEDQMAANLVKHGPLAVGIN 281
            +  E  YPY  + G    C      +  A +  +  I S E  MAA L K+GP+++ ++
Sbjct: 207 TMFTEDSYPYVSSSGYVPECSNSSQLVPGARIDGYMTIESSETVMAAWLAKNGPISIAVD 266

Query: 282 AVWMQTYIGGV--SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGE 339
           A    +Y  GV  SC    G  L+HGVL+VGY  +G       E PYW+IKNSWGE+WGE
Sbjct: 267 ASSFMSYESGVLTSC---AGDTLNHGVLLVGYNMTG-------EVPYWVIKNSWGEDWGE 316

Query: 340 NGYYKICMGRNVC 352
           NGY ++ MG N C
Sbjct: 317 NGYVRVTMGVNAC 329


>gi|50355617|dbj|BAD29957.1| cysteine protease [Daucus carota]
          Length = 437

 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 121/302 (40%), Positives = 174/302 (57%), Gaps = 29/302 (9%)

Query: 59  KFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH--GVTKFSDLTPSEFRRQFLGL 116
           K  K+Y    E + RF++FK NLR        DP   +  G+ +F+DLT  E+R ++LG 
Sbjct: 55  KHGKSYNALGEKETRFQIFKDNLRYIDNHNA-DPDRSYELGLNRFADLTNEEYRAKYLGT 113

Query: 117 NRRLRLPADAQK-----APILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALE 171
             R   P  ++      AP+    +LP   DWR+ GAV  VKDQG+CGSCW+FSA GA+E
Sbjct: 114 KSRESRPKLSKGPSDRYAPV-EGEELPDSIDWREKGAVAAVKDQGSCGSCWAFSAIGAVE 172

Query: 172 GAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKD 231
           G + ++TGEL++LSEQ+LVDCD         S + GC GGLM+ AF +I+K GG++ + D
Sbjct: 173 GINQITTGELITLSEQELVDCDR--------SYNEGCEGGLMDYAFNFIIKNGGIDSDLD 224

Query: 232 YPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWM--QTYI 289
           YPYTG DG   +  ++     + ++  +   +++       + P++V I A  M  Q Y+
Sbjct: 225 YPYTGRDGTCNQNKENAKVVTIDSYEDVPVYDEKALQKAAANQPISVAIEAGGMDFQLYV 284

Query: 290 GGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR 349
            G+     CG  +DHGV++VGYGS        +   YWI++NSWG  WGE GY K  M R
Sbjct: 285 SGIFTG-KCGTAVDHGVVVVGYGSE-------EGMDYWIVRNSWGAAWGEAGYLK--MQR 334

Query: 350 NV 351
           NV
Sbjct: 335 NV 336


>gi|24653516|ref|NP_725347.1| cysteine proteinase-1, isoform A [Drosophila melanogaster]
 gi|24653518|ref|NP_725348.1| cysteine proteinase-1, isoform B [Drosophila melanogaster]
 gi|1658527|gb|AAB18345.1| cysteine proteinase 1 [Drosophila melanogaster]
 gi|2305221|gb|AAB65749.1| cysteine proteinase-1 [Drosophila melanogaster]
 gi|7303249|gb|AAF58311.1| cysteine proteinase-1, isoform A [Drosophila melanogaster]
 gi|21627210|gb|AAM68566.1| cysteine proteinase-1, isoform B [Drosophila melanogaster]
 gi|54650754|gb|AAV36956.1| LP06554p [Drosophila melanogaster]
 gi|220951982|gb|ACL88534.1| Cp1-PA [synthetic construct]
          Length = 341

 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 132/320 (41%), Positives = 177/320 (55%), Gaps = 30/320 (9%)

Query: 56  FKSKFSKTYATQEEHDYRFRVFKANLRR-AKRRQLLDPTAVH---GVTKFSDLTPSEFRR 111
           FK +  K Y  + E  +R ++F  N  + AK  Q      V     V K++DL   EFR+
Sbjct: 32  FKLEHRKNYQDETEERFRLKIFNENKHKIAKHNQRFAEGKVSFKLAVNKYADLLHHEFRQ 91

Query: 112 QFLGLN----RRLRLPADAQKAP--ILPTN-DLPTDFDWRDHGAVTGVKDQGACGSCWSF 164
              G N    ++LR   ++ K    I P +  LP   DWR  GAVT VKDQG CGSCW+F
Sbjct: 92  LMNGFNYTLHKQLRAADESFKGVTFISPAHVTLPKSVDWRTKGAVTAVKDQGHCGSCWAF 151

Query: 165 SATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAG 224
           S+TGALEG HF  +G LVSLSEQ LVDC        +   ++GCNGGLM++AF YI   G
Sbjct: 152 SSTGALEGQHFRKSGVLVSLSEQNLVDC-------STKYGNNGCNGGLMDNAFRYIKDNG 204

Query: 225 GVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVI-SSDEDQMAANLVKHGPLAVGINAV 283
           G++ EK YPY   D  SC F+K  + A    F+ I   DE +MA  +   GP++V I+A 
Sbjct: 205 GIDTEKSYPYEAID-DSCHFNKGTVGATDRGFTDIPQGDEKKMAEAVATVGPVSVAIDAS 263

Query: 284 W--MQTYIGGV-SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGEN 340
               Q Y  GV + P    + LDHGVL+VG+G+          + YW++KNSWG  WG+ 
Sbjct: 264 HESFQFYSEGVYNEPQCDAQNLDHGVLVVGFGTDESG------EDYWLVKNSWGTTWGDK 317

Query: 341 GYYKICMGR-NVCGVDSMVS 359
           G+ K+   + N CG+ S  S
Sbjct: 318 GFIKMLRNKENQCGIASASS 337


>gi|302763837|ref|XP_002965340.1| hypothetical protein SELMODRAFT_143126 [Selaginella moellendorffii]
 gi|302790566|ref|XP_002977050.1| hypothetical protein SELMODRAFT_232903 [Selaginella moellendorffii]
 gi|300155026|gb|EFJ21659.1| hypothetical protein SELMODRAFT_232903 [Selaginella moellendorffii]
 gi|300167573|gb|EFJ34178.1| hypothetical protein SELMODRAFT_143126 [Selaginella moellendorffii]
          Length = 300

 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 122/316 (38%), Positives = 175/316 (55%), Gaps = 31/316 (9%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLL-DPTAVHGVTKFSDLTPSEFRR 111
           F  + +K  K+Y++  E   R  +F   L   ++   L + T   G+ KFSDLT +EFR 
Sbjct: 2   FEGWAAKHGKSYSSDWEKARRLMIFSDTLAYIEKHNALPNTTFTLGLNKFSDLTNAEFRA 61

Query: 112 QFLGLNRRLRLPADAQKAPI----LPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSAT 167
            ++G   + + P    + P     +  + LPT  DWR  GAVT +KDQG CGSCW+FSA 
Sbjct: 62  NYVG---KFKPPRYQDRRPAKDVDVDVSSLPTSLDWRQEGAVTPIKDQGQCGSCWAFSAI 118

Query: 168 GALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVE 227
            ++E AHFL+T ELVSLSEQQL+DCD         + D GC GG    AF+++++ GGV 
Sbjct: 119 ASIESAHFLATKELVSLSEQQLIDCD---------TVDQGCQGGFPEDAFKFVVENGGVT 169

Query: 228 REKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGI--NAVWM 285
            E+ YPYTG   GSC  +K+K+   ++ +  ++ D        V   P+ VGI  +    
Sbjct: 170 TEEAYPYTGF-AGSCNANKNKV-VEITGYKDVTKDSADALMKAVSKTPVTVGICGSDQNF 227

Query: 286 QTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKI 345
           Q Y  G+   + C    DH VL++GYG+ G         PYWIIKNSWG +WGE+G+ +I
Sbjct: 228 QNYRSGILSGH-CSNSRDHAVLVIGYGTEG-------GMPYWIIKNSWGTSWGEDGFMRI 279

Query: 346 CM--GRNVCGVDSMVS 359
               G  +CG++   S
Sbjct: 280 KKEDGEGMCGMNGQSS 295


>gi|302790570|ref|XP_002977052.1| hypothetical protein SELMODRAFT_268054 [Selaginella moellendorffii]
 gi|300155028|gb|EFJ21661.1| hypothetical protein SELMODRAFT_268054 [Selaginella moellendorffii]
          Length = 300

 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 122/316 (38%), Positives = 175/316 (55%), Gaps = 31/316 (9%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLL-DPTAVHGVTKFSDLTPSEFRR 111
           F  + +K  K+Y++  E   R  +F   L   ++   L + T   G+ KFSDLT +EFR 
Sbjct: 2   FEGWAAKHGKSYSSDWEKARRLMIFSDTLAYIEKHNALPNTTFTLGLNKFSDLTNAEFRA 61

Query: 112 QFLGLNRRLRLPADAQKAPI----LPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSAT 167
            ++G   + + P    + P     +  + LPT  DWR  GAVT +KDQG CGSCW+FSA 
Sbjct: 62  NYVG---KFKPPRYQDRRPAKDVDVDVSSLPTSLDWRQEGAVTPIKDQGQCGSCWAFSAI 118

Query: 168 GALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVE 227
            ++E AHFL+T ELVSLSEQQL+DCD         + D GC GG    AF+++++ GGV 
Sbjct: 119 ASIESAHFLATKELVSLSEQQLIDCD---------TVDQGCQGGFPEDAFKFVVENGGVT 169

Query: 228 REKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGI--NAVWM 285
            E+ YPYTG   GSC  +K+K+   ++ +  ++ D        V   P+ VGI  +    
Sbjct: 170 TEEAYPYTGF-AGSCNANKNKV-VEITGYKDVTKDSADALMKAVSKTPVTVGICGSDQNF 227

Query: 286 QTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKI 345
           Q Y  G+   + C    DH VL++GYG+ G         PYWIIKNSWG +WGE+G+ +I
Sbjct: 228 QNYRSGILSGH-CSNSRDHAVLVIGYGTEG-------GMPYWIIKNSWGTSWGEDGFMRI 279

Query: 346 CM--GRNVCGVDSMVS 359
               G  +CG++   S
Sbjct: 280 KKKDGEGMCGMNGQSS 295


>gi|33112583|gb|AAP94047.1| cathepsin-L-like cysteine peptidase 03 [Tenebrio molitor]
          Length = 337

 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 133/334 (39%), Positives = 179/334 (53%), Gaps = 26/334 (7%)

Query: 39  GEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRR-AKRRQLLDPTAVH- 96
           G Q+       +  +  FK   +K Y +  E  +R ++F  N    AK  +L     V  
Sbjct: 13  GSQAVSFFDLVQEQWGAFKMTHNKQYQSDTEERFRMKIFMENSHTVAKHNKLYAQGLVSF 72

Query: 97  --GVTKFSDLTPSEFRRQFLGLNRR---LRLPADAQKAPILPTND--LPTDFDWRDHGAV 149
             G+ K++D+   EF +   G NR    LR          LP  +  LP   DWRD GAV
Sbjct: 73  KLGINKYADMLHHEFVQVLNGFNRTKSGLRSGESDDSVTFLPPANVQLPGQIDWRDKGAV 132

Query: 150 TGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCN 209
           T VKDQG CGSCWSFSATG+LEG HF  +G+LVSLSEQ LVDC      E+ G  ++GCN
Sbjct: 133 TPVKDQGQCGSCWSFSATGSLEGQHFRKSGKLVSLSEQNLVDC-----SEKFG--NNGCN 185

Query: 210 GGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAAN 269
           GGLM++AF YI   GG++ E+ YPY   D       K+K A       + S +ED++ + 
Sbjct: 186 GGLMDNAFRYIKANGGIDTEQAYPYKAEDEKCHYKPKNKGATDRGYVDIESGNEDKLQSA 245

Query: 270 LVKHGPLAVGINAVW--MQTYIGGVSC-PYICGKYLDHGVLIVGYGSSGFAPIRFKEKPY 326
           +   GP++V I+A     Q Y GGV   P      LDHGVL+VGYG+            Y
Sbjct: 246 VATVGPVSVAIDASHQSFQLYSGGVYYEPDCSASQLDHGVLVVGYGTEDDGT------DY 299

Query: 327 WIIKNSWGENWGENGYYKICMGR-NVCGVDSMVS 359
           W++KNSWG++WG+ GY K+   R N CG+ +  S
Sbjct: 300 WLVKNSWGKSWGDQGYIKMARNRDNNCGIATEAS 333


>gi|13124026|sp|Q9WGE0.1|CATV_NPVHC RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|4884631|gb|AAD31760.1|AF120926_1 cysteine proteinase [Hyphantria cunea nucleopolyhedrovirus]
          Length = 324

 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 117/326 (35%), Positives = 179/326 (54%), Gaps = 28/326 (8%)

Query: 46  LLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLT 105
           LL A  +F  F  KF+K Y+++ E   RF++F+ NL     +   D TA + + KFSDL+
Sbjct: 21  LLKAPSYFEDFLHKFNKHYSSESEKLRRFQIFQHNLEEIIIKNQNDTTAQYEINKFSDLS 80

Query: 106 PSEFRRQFLGLNRRLRLPADAQ---KAPIL--PTNDLPTDFDWRDHGAVTGVKDQGACGS 160
             E   ++ GL     LP   Q   +  +L  P +  P +FDWR    VT VK+QG CG+
Sbjct: 81  KDETISKYTGL----ALPLQTQNFCEVVVLNRPPDKGPLEFDWRRLNKVTSVKNQGICGA 136

Query: 161 CWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYI 220
           CW+F+   +LE    +   +L++LSEQQL+DCD+          D+GCNGGL+++A+E +
Sbjct: 137 CWAFATLASLESQFAIKHNQLINLSEQQLIDCDY---------VDAGCNGGLLHTAYEAV 187

Query: 221 LKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGI 280
           ++ GGV+ E DYPY G+DG         +      +  I+  E+++   L   GP+ V I
Sbjct: 188 MQMGGVQAENDYPYEGSDGNCRVDVAKFVVKVKKCYRYIAVFEEKLKDLLRIVGPIPVAI 247

Query: 281 NAVWMQTYIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGE 339
           +A  +  Y  G+     C  Y  +H VL+VGYG            PYWI+KN+WGE+WGE
Sbjct: 248 DASDIVNYRRGIM--RYCSNYGFNHAVLLVGYGVEN-------NVPYWILKNTWGEDWGE 298

Query: 340 NGYYKICMGRNVCGVDSMVSSVAAIH 365
            GY+++    N CG+ + + + A I+
Sbjct: 299 QGYFRVQQNINACGIRNELLASAEIY 324


>gi|226495425|ref|NP_001148706.1| cysteine protease 1 precursor [Zea mays]
 gi|195621544|gb|ACG32602.1| cysteine protease 1 precursor [Zea mays]
          Length = 463

 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 127/327 (38%), Positives = 179/327 (54%), Gaps = 34/327 (10%)

Query: 35  VPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTA 94
           + S GE+S +    A   ++ + +   +TY    E + R++VF+ NLR            
Sbjct: 26  IVSYGERSXEE---ARRMYAEWMAAHGRTYNAVGEEERRYQVFRDNLRYIDAHNAAADAG 82

Query: 95  VH----GVTKFSDLTPSEFRRQFLGL----NRRLRLPADAQKAPILPTNDLPTDFDWRDH 146
           VH    G+ +F+DLT  E+R  +LG      R  +L A    A      DLP   DWR  
Sbjct: 83  VHSFRLGLNRFADLTNDEYRATYLGARTRPQRERKLGARYHAAD---NEDLPESVDWRAK 139

Query: 147 GAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDS 206
           GAV  VKDQG+CGSCW+FS   A+EG + + TG+L+SLSEQ+LVDCD         S + 
Sbjct: 140 GAVAEVKDQGSCGSCWAFSTIAAVEGINQIVTGDLISLSEQELVDCDT--------SYNQ 191

Query: 207 GCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQM 266
           GCNGGLM+ AFE+I+  GG++ EKDYPY GTDG      K+     + ++  + +++++ 
Sbjct: 192 GCNGGLMDYAFEFIINNGGIDTEKDYPYKGTDGRCDVNRKNAKVVTIDSYEDVPANDEKS 251

Query: 267 AANLVKHGPLAVGINA--VWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEK 324
               V + P++V I A     Q Y  G+     CG  LDHGV  VGYG+          K
Sbjct: 252 LQKAVANQPVSVAIEAAGTAFQLYSSGIFTG-SCGTALDHGVTAVGYGTE-------NGK 303

Query: 325 PYWIIKNSWGENWGENGYYKICMGRNV 351
            YWI+KNSWG +WGE+GY +  M RN+
Sbjct: 304 DYWIVKNSWGSSWGESGYVR--MERNI 328


>gi|15824693|gb|AAL09444.1| cysteine protease [Leishmania donovani]
          Length = 394

 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 130/313 (41%), Positives = 175/313 (55%), Gaps = 34/313 (10%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           F  FK  + + Y T  E   R   F+ NL   +  Q  +P A  G+TKF DL+ +EF  +
Sbjct: 38  FEEFKRTYRRAYGTLAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 113 FLGLNRRLRLPADAQKA------PILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSA 166
           +L  N      A  Q A           + +P   DWR+ GAVT VK+QGACGSCW+FSA
Sbjct: 98  YL--NGAAYFAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSCWAFSA 155

Query: 167 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK--AG 224
            G +E     +   LVSLSEQQLV CD +         D+GCNGGLM  AFE++L+   G
Sbjct: 156 VGNIESQWARAGHGLVSLSEQQLVSCDDK---------DNGCNGGLMLQAFEWLLRHMYG 206

Query: 225 GVEREKDYPYTGTDGGSCK-FDKSKI--AAAVSNFSVISSDEDQMAANLVKHGPLAVGIN 281
            V  EK YPYT  +G   +  + SK+   A +  + +I S+E  MAA L ++GP+A+G++
Sbjct: 207 IVFTEKSYPYTSGNGDVAECLNSSKLVPGARIDGYVMIPSNETVMAAWLAENGPIAIGVD 266

Query: 282 AVWMQTYIGGV--SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGE 339
           A    +Y  GV  SC    G  L+HGVL+VGY ++G         PY +IKNSWGE+WGE
Sbjct: 267 ASSFMSYQSGVLTSC---AGDALNHGVLLVGYNTTGGV-------PYCVIKNSWGEDWGE 316

Query: 340 NGYYKICMGRNVC 352
            GY ++ MG N C
Sbjct: 317 KGYVRVAMGLNAC 329


>gi|401416326|ref|XP_003872658.1| putative cathepsin L-like protease [Leishmania mexicana
           MHOM/GT/2001/U1103]
 gi|14348750|emb|CAC41275.1| CPB2 protein [Leishmania mexicana]
 gi|322488882|emb|CBZ24132.1| putative cathepsin L-like protease [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 359

 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 123/309 (39%), Positives = 168/309 (54%), Gaps = 26/309 (8%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           F  FK  + + Y T  E   R   F+ NL   +  Q  +P A  G+TKF DL+ +EF  +
Sbjct: 38  FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFAAR 97

Query: 113 FLG----LNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATG 168
           +L          R  A   +      + +P   DWR+ GAVT VKDQG CGSCW+FS+ G
Sbjct: 98  YLNGAAYFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKDQGECGSCWAFSSVG 157

Query: 169 ALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK--AGGV 226
            +EG  +L+  ELVSLSEQQLV CD   D         GC+GGLM  AF+++L+   G +
Sbjct: 158 NIEGQWYLAGHELVSLSEQQLVSCDDMND---------GCDGGLMLQAFDWLLQNTNGHL 208

Query: 227 EREKDYPYTGTDGGSCKFDKSK---IAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAV 283
             E  YPY   +G   +   S    + A + +  +I S E  MAA L K+GP+A+ ++A 
Sbjct: 209 YTEDSYPYVSGNGYLPECSNSSELVVGAQIDSHVLIGSSEKAMAAWLAKNGPIAIALDAS 268

Query: 284 WMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYY 343
              +Y  GV    I GK ++H VL+VGY  +G       E PYW+IKNSWG +WGE GY 
Sbjct: 269 SFMSYKSGVLTACI-GKEVNHAVLLVGYDMTG-------EVPYWVIKNSWGGDWGEQGYV 320

Query: 344 KICMGRNVC 352
           ++ MG N C
Sbjct: 321 RVVMGVNAC 329


>gi|12597541|ref|NP_075125.1| cathepsin [Helicoverpa armigera nucleopolyhedrovirus G4]
 gi|15426394|ref|NP_203611.1| cathepsin [Helicoverpa armigera NPV]
 gi|12483807|gb|AAG53799.1|AF271059_56 cathepsin [Helicoverpa armigera nucleopolyhedrovirus G4]
 gi|15384470|gb|AAK96381.1|AF303045_123 cathepsin [Helicoverpa armigera NPV]
 gi|18027090|gb|AAL55725.1|AF268612_1 cathepsin [Helicoverpa armigera NPV]
          Length = 365

 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 125/328 (38%), Positives = 180/328 (54%), Gaps = 38/328 (11%)

Query: 45  HLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRR--AKRRQL----------LDP 92
           +L  +E +F  F  +++K+Y   +E+ YR+ VFK NL +  ++ R+           L  
Sbjct: 47  NLDQSEIYFKHFLQQYNKSYDDPKEYQYRYNVFKDNLNKINSQNRENLLNNKNNNDSLST 106

Query: 93  TAVHGVTKFSDLTPSEFRRQ----FLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGA 148
           +A  GV KFSD TP E        FL L++   L  + +     P   LP  +DWRD   
Sbjct: 107 SAQFGVNKFSDKTPDEVLHSNTGFFLNLSQHYTL-CENRIVKGAPNIRLPDYYDWRDTNK 165

Query: 149 VTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGC 208
           VT +KDQG CGSCW+F A G +E  + +   +L+ LSEQQL+DCD           D GC
Sbjct: 166 VTPIKDQGVCGSCWAFVAIGNIESQYAIRHNKLIDLSEQQLLDCD---------EVDLGC 216

Query: 209 NGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMA 267
           NGGLM+ AF+ +L  GGVE E DYPY G++   C  D  KIA  +++ F     DE+++ 
Sbjct: 217 NGGLMHLAFQELLLMGGVETEADYPYQGSE-QMCTLDNRKIAVKLNSCFKYDIRDENKLK 275

Query: 268 ANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPY 326
             +   GP+A+ ++A+ +  Y  G+     C  Y L+H VL++G+G            PY
Sbjct: 276 ELVYTTGPVAIAVDAMDIINYRRGILNQ--CHIYDLNHAVLLIGWGIEN-------NVPY 326

Query: 327 WIIKNSWGENWGENGYYKICMGRNVCGV 354
           WIIKNSWGE+WGENGY ++    N CG+
Sbjct: 327 WIIKNSWGEDWGENGYLRVRRNVNACGL 354


>gi|357437715|ref|XP_003589133.1| Cysteine proteinase [Medicago truncatula]
 gi|87240770|gb|ABD32628.1| Granulin; Peptidase C1A, papain [Medicago truncatula]
 gi|355478181|gb|AES59384.1| Cysteine proteinase [Medicago truncatula]
          Length = 474

 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 129/355 (36%), Positives = 187/355 (52%), Gaps = 26/355 (7%)

Query: 1   MERLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAE--HHFSLFKS 58
           M+   LS  + L++  +++S       D  I     +  ++S     N E    +  +  
Sbjct: 1   MDSNTLSPAMKLMIVLIISSFTVSLALDMSIISYDKTHPDKSTSKRTNKEVLTMYEEWLV 60

Query: 59  KFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGL-- 116
           K  K+Y    E D RF +FK NL+       L+ T   G+T+F+DLT  E+R +FLG   
Sbjct: 61  KHGKSYNGLGEKDKRFEIFKDNLKFIDEHNGLNSTYRLGLTRFADLTNEEYRSKFLGTKI 120

Query: 117 --NRRLRLPADAQKAPILPT--NDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEG 172
             NRR++    ++     P   + LP   DWR  GAV GVKDQ +CGSCW+FSA  A+EG
Sbjct: 121 DPNRRMKKLGGSKSNRYAPRVGDKLPESVDWRKEGAVVGVKDQASCGSCWAFSAIAAVEG 180

Query: 173 AHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDY 232
            + + TG+L+SLSEQ+LVDCD         S + GCNGGLM+ AFE+I+  GG++ E DY
Sbjct: 181 INKIVTGDLISLSEQELVDCDT--------SYNEGCNGGLMDYAFEFIISNGGIDSEDDY 232

Query: 233 PYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGIN--AVWMQTYIG 290
           PY   DG   +  K+     + ++  + + ++      V + P+AV +       Q Y  
Sbjct: 233 PYKAVDGRCDQNRKNAKVVTIDDYEDVPAYDELALQKAVANQPIAVAVEGGGREFQLYEY 292

Query: 291 GVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKI 345
           GV     CG  LDHGV  VGYG+          K YWI++NSWG +WGE GY ++
Sbjct: 293 GVFTGR-CGTALDHGVAAVGYGTE-------NGKDYWIVRNSWGGSWGEQGYIRL 339


>gi|320169658|gb|EFW46557.1| cathepsin L2 [Capsaspora owczarzaki ATCC 30864]
          Length = 324

 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 130/316 (41%), Positives = 176/316 (55%), Gaps = 26/316 (8%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           F  +K+    +YAT  E   R  +++ANL   ++      +    V KF+DLT  EF  +
Sbjct: 22  FDSWKATHGVSYATVGEETARRGIYRANLDFIEKHNSEGHSYKLAVNKFADLTYPEFAAK 81

Query: 113 FLGLNRRLRLPADAQKAPI-LPTN-DLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGAL 170
           +LGL         +  A   LP    LP   DWR  G VT +KDQG CGSCWSFS TG++
Sbjct: 82  YLGLRFDATNATKSFAASTYLPRMVSLPDSVDWRTAGIVTPIKDQGQCGSCWSFSTTGSV 141

Query: 171 EGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREK 230
           EG H   TG+LVSLSEQ LVDC        S   ++GCNGGLM+ AF+YI+   G++ E 
Sbjct: 142 EGQHARKTGQLVSLSEQNLVDC-------SSAQGNAGCNGGLMDQAFQYIISNNGIDTES 194

Query: 231 DYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKH-GPLAVGINAVW--MQT 287
            YPYT  D G+C+F+ + + A V+++  I+S  +    N V   GP++V I+A     Q 
Sbjct: 195 SYPYTAQD-GTCQFNSANVGATVASYQDIASGSESDLQNAVATVGPISVAIDASQPSFQF 253

Query: 288 YIGGV-SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKIC 346
           Y  GV + P      LDHGVL VGYG+SG          YW++KNSWG +WG++GY  I 
Sbjct: 254 YSSGVYNEPACSSSQLDHGVLAVGYGTSG-------SSDYWLVKNSWGTSWGQSGY--IW 304

Query: 347 MGRNV---CGVDSMVS 359
           M RN    CG+ +  S
Sbjct: 305 MTRNSNNQCGIATAAS 320


>gi|254674508|dbj|BAH86062.1| cysteine protease [Haemaphysalis longicornis]
          Length = 333

 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 136/331 (41%), Positives = 174/331 (52%), Gaps = 32/331 (9%)

Query: 42  SEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKAN-LRRAKRRQLLDPTAVH---G 97
           S   +L  E  +  FKS+ +K Y++  E   RF++F  N L  AK         V     
Sbjct: 18  SSQEILRTE--WEAFKSQHNKAYSSHVEELLRFKIFTENTLLVAKHNAKYAKGLVSYKLA 75

Query: 98  VTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTND--LPTDFDWRDHGAVTGVKDQ 155
           + KF DL P EF +   G   +          P    ND  LPT  DWR  GAVT VK+Q
Sbjct: 76  MNKFGDLLPHEFAKMVNGYRGKQNKEQRPTFIPPANLNDSSLPTTVDWRKKGAVTPVKNQ 135

Query: 156 GACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNS 215
           G CGSCW+FS TG+LEG HF  TG+LVSLSEQ LVDC  +         + GCNGGLM++
Sbjct: 136 GQCGSCWAFSTTGSLEGQHFRKTGKLVSLSEQNLVDCSDDFG-------NQGCNGGLMDN 188

Query: 216 AFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHG 274
            F+YI   GG++ E+ +PYT  D G CKF K+ + A  + F  +    ED +   +   G
Sbjct: 189 GFQYIKANGGIDTEESHPYTAQD-GDCKFKKADVGATDAGFVDIQQGSEDDLKKAVATVG 247

Query: 275 PLAVGINAVW--MQTYIGGV-SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKN 331
           P++V I+A     Q Y  GV   P      LDHGVL VGYG           K YW++KN
Sbjct: 248 PVSVAIDASHGSFQLYSQGVYDEPDCSSSQLDHGVLTVGYGVK-------NGKKYWLVKN 300

Query: 332 SWGENWGENGYYKICMGR---NVCGVDSMVS 359
           SWG +WG+NGY  I M R   N CG+ S  S
Sbjct: 301 SWGGDWGDNGY--ILMSRDKDNQCGIASSAS 329


>gi|344310882|gb|AEN03980.1| cathepsin-like cysteine proteinase [Helicoverpa armigera NPV strain
           Australia]
          Length = 367

 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 125/328 (38%), Positives = 180/328 (54%), Gaps = 38/328 (11%)

Query: 45  HLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRR--AKRRQL----------LDP 92
           +L  +E +F  F  +++K+Y   +E+ YR+ VFK NL +  ++ R+           L  
Sbjct: 49  NLDQSEIYFKHFLQQYNKSYDDPKEYQYRYNVFKDNLNKINSQNRENLLNNKNNNDSLST 108

Query: 93  TAVHGVTKFSDLTPSEFRRQ----FLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGA 148
           +A  GV KFSD TP E        FL L++   L  + +     P   LP  +DWRD   
Sbjct: 109 SAQFGVNKFSDKTPDEVLHSNTGFFLNLSQHYTL-CENRIVKGAPNIRLPDYYDWRDTNK 167

Query: 149 VTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGC 208
           VT +KDQG CGSCW+F A G +E  + +   +L+ LSEQQL+DCD           D GC
Sbjct: 168 VTPIKDQGVCGSCWAFVAIGNIESQYAIRHNKLIDLSEQQLLDCD---------EVDLGC 218

Query: 209 NGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMA 267
           NGGLM+ AF+ +L  GGVE E DYPY G++   C  D  KIA  +++ F     DE+++ 
Sbjct: 219 NGGLMHLAFQELLLMGGVETEADYPYQGSE-QMCTLDNRKIAVKLNSCFKYDIRDENKLK 277

Query: 268 ANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPY 326
             +   GP+A+ ++A+ +  Y  G+     C  Y L+H VL++G+G            PY
Sbjct: 278 ELVYTTGPVAIAVDAMDIINYRRGILNQ--CHIYDLNHAVLLIGWGIEN-------NVPY 328

Query: 327 WIIKNSWGENWGENGYYKICMGRNVCGV 354
           WIIKNSWGE+WGENGY ++    N CG+
Sbjct: 329 WIIKNSWGEDWGENGYLRVRRNVNACGL 356


>gi|357437719|ref|XP_003589135.1| Cysteine proteinase [Medicago truncatula]
 gi|355478183|gb|AES59386.1| Cysteine proteinase [Medicago truncatula]
          Length = 457

 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 129/355 (36%), Positives = 187/355 (52%), Gaps = 26/355 (7%)

Query: 1   MERLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAE--HHFSLFKS 58
           M+   LS  + L++  +++S       D  I     +  ++S     N E    +  +  
Sbjct: 1   MDSNTLSPAMKLMIVLIISSFTVSLALDMSIISYDKTHPDKSTSKRTNKEVLTMYEEWLV 60

Query: 59  KFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGL-- 116
           K  K+Y    E D RF +FK NL+       L+ T   G+T+F+DLT  E+R +FLG   
Sbjct: 61  KHGKSYNGLGEKDKRFEIFKDNLKFIDEHNGLNSTYRLGLTRFADLTNEEYRSKFLGTKI 120

Query: 117 --NRRLRLPADAQKAPILPT--NDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEG 172
             NRR++    ++     P   + LP   DWR  GAV GVKDQ +CGSCW+FSA  A+EG
Sbjct: 121 DPNRRMKKLGGSKSNRYAPRVGDKLPESVDWRKEGAVVGVKDQASCGSCWAFSAIAAVEG 180

Query: 173 AHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDY 232
            + + TG+L+SLSEQ+LVDCD         S + GCNGGLM+ AFE+I+  GG++ E DY
Sbjct: 181 INKIVTGDLISLSEQELVDCDT--------SYNEGCNGGLMDYAFEFIISNGGIDSEDDY 232

Query: 233 PYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGIN--AVWMQTYIG 290
           PY   DG   +  K+     + ++  + + ++      V + P+AV +       Q Y  
Sbjct: 233 PYKAVDGRCDQNRKNAKVVTIDDYEDVPAYDELALQKAVANQPIAVAVEGGGREFQLYEY 292

Query: 291 GVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKI 345
           GV     CG  LDHGV  VGYG+          K YWI++NSWG +WGE GY ++
Sbjct: 293 GVFTGR-CGTALDHGVAAVGYGTE-------NGKDYWIVRNSWGGSWGEQGYIRL 339


>gi|50355623|dbj|BAD29960.1| cysteine protease [Daucus carota]
          Length = 460

 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 119/325 (36%), Positives = 183/325 (56%), Gaps = 28/325 (8%)

Query: 42  SEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKAN-LRRAKRRQLLDPTAVHGVTK 100
           S D ++ A +   L K    K+Y    E + RF++FK N L   ++    D +   G+ +
Sbjct: 35  STDDVIMAAYESWLVK--HGKSYNALGEKEQRFQIFKDNFLYIDEQNAAKDRSFKLGLNR 92

Query: 101 FSDLTPSEFRRQFLGL---NRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGA 157
           F+DLT  E+R ++ G+   + R ++   +Q+   L    LP   DWR+HGAV  VKDQG 
Sbjct: 93  FADLTNEEYRSKYTGIRTKDSRKKVSGKSQRYASLAGESLPESVDWREHGAVASVKDQGQ 152

Query: 158 CGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAF 217
           CGSCW+FS   A+EG + ++TG+L++LSEQ+LVDCD         S + GCNGGLM+ AF
Sbjct: 153 CGSCWAFSTISAVEGINQIATGKLITLSEQELVDCDR--------SYNEGCNGGLMDDAF 204

Query: 218 EYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLA 277
           ++I+  GG++ + DYPYTG DG   ++ K+     + ++  +   +++       + P++
Sbjct: 205 QFIINNGGIDSDADYPYTGRDGQCDQYRKNAKVVTIDSYEDVPEYDEKALQKAAANQPIS 264

Query: 278 VGINAVW--MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGE 335
           V I A     Q Y  G+     CG  LDHGV++VGYG+          K YWI++NSWG 
Sbjct: 265 VAIEASGRDFQFYDSGIFTG-KCGTDLDHGVVVVGYGTE-------NGKDYWIVRNSWGA 316

Query: 336 NWGENGYYKICMG----RNVCGVDS 356
           +WGE GY ++  G      +CG+ S
Sbjct: 317 DWGEKGYLRMERGISSKAGICGITS 341


>gi|401430108|ref|XP_003879535.1| unnamed protein product [Leishmania mexicana MHOM/GT/2001/U1103]
 gi|356491914|emb|CBZ40911.1| unnamed protein product [Leishmania mexicana MHOM/GT/2001/U1103]
          Length = 359

 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 123/309 (39%), Positives = 167/309 (54%), Gaps = 26/309 (8%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           F  FK  + + Y T  E   R   F+ NL   +  Q  +P A  G+TKF DL+ +EF  +
Sbjct: 38  FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFAAR 97

Query: 113 FLG----LNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATG 168
           +L          R  A   +      + +P   DWR+ GAVT VKDQG CGSCW+FS+ G
Sbjct: 98  YLNGAAYFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKDQGECGSCWAFSSVG 157

Query: 169 ALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK--AGGV 226
            +EG  +L+  ELVSLSEQQLV CD   D         GC+GGLM  AF+++L+   G +
Sbjct: 158 NIEGQWYLAGHELVSLSEQQLVSCDDMND---------GCDGGLMLQAFDWLLQNTNGHL 208

Query: 227 EREKDYPYTGTDGGSCKFDKSK---IAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAV 283
             E  YPY   +G   +   S    + A +    +I S E  MAA L K+GP+A+ ++A 
Sbjct: 209 YTEDSYPYVSGNGYLPECSNSSKLVVGAQIDGHVLIGSSEKAMAAWLAKNGPIAIALDAS 268

Query: 284 WMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYY 343
              +Y  GV    I GK ++H VL+VGY  +G       E PYW+IKNSWG +WGE GY 
Sbjct: 269 SFMSYKSGVLTACI-GKQVNHAVLLVGYDMTG-------EVPYWVIKNSWGGDWGEQGYV 320

Query: 344 KICMGRNVC 352
           ++ MG N C
Sbjct: 321 RVVMGVNAC 329


>gi|224081756|ref|XP_002306486.1| predicted protein [Populus trichocarpa]
 gi|222855935|gb|EEE93482.1| predicted protein [Populus trichocarpa]
          Length = 352

 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 129/325 (39%), Positives = 177/325 (54%), Gaps = 36/325 (11%)

Query: 53  FSLFK---SKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEF 109
            S++K   +K  K Y    E   RF +FK NLR        + T   G+TKF+DLT  E+
Sbjct: 1   MSMYKWWLAKHGKAYNGLGEEAERFEIFKNNLRFIDEHNSQNHTYKVGLTKFADLTNEEY 60

Query: 110 RRQFLGLN-----RRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSF 164
           R  FLG       R ++  + +++      + LP   DWR  GAV  +KDQG+CGSCW+F
Sbjct: 61  RAMFLGTRSDAKRRLMKSKSPSERYAFKAGDKLPESVDWRAKGAVNPIKDQGSCGSCWAF 120

Query: 165 SATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAG 224
           S   A+EG + + TGEL+SLSEQ+LVDCD         + ++GCNGGLM+ AF++I+  G
Sbjct: 121 STVAAVEGINQIVTGELISLSEQELVDCDR--------TYNAGCNGGLMDYAFQFIINNG 172

Query: 225 GVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW 284
           G++ EKDYPY G D    K      A ++  F  +   +++     V H P++V I A  
Sbjct: 173 GLDTEKDYPYVGDDDKCDKDKMKTKAVSIDGFEDVLPYDEKALQKAVAHQPVSVAIEASG 232

Query: 285 M--QTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGY 342
           M  Q Y  GV     CG  LDHGV++VGY S            YW+++NSWG  WGE+GY
Sbjct: 233 MALQFYQSGVFTGE-CGTALDHGVVVVGYASENGL-------DYWLVRNSWGTEWGEHGY 284

Query: 343 YKICMGRNV-------CGVDSMVSS 360
            K  M RNV       CG+ +M SS
Sbjct: 285 IK--MQRNVGDTYTGRCGI-AMESS 306


>gi|394331822|gb|AFN27130.1| cysteine protease [Leishmania tropica]
          Length = 443

 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 128/313 (40%), Positives = 168/313 (53%), Gaps = 34/313 (10%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           F  FK  + + Y T  E   R   F+ NL   +  Q  +P A  G+TKF DL+ +EF  +
Sbjct: 38  FEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 113 FLGLNRRLRLPADAQKA------PILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSA 166
           +L  N      A  Q A           + +P   DWR  GAVT VKDQGACGSCW+FSA
Sbjct: 98  YL--NGAAYFAAAKQHAGQHYRKARADLSAVPYAVDWRKKGAVTPVKDQGACGSCWAFSA 155

Query: 167 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK--AG 224
            G++E    L+   L +LSEQQLV CD +         DSGC GGLM  AFE++L+   G
Sbjct: 156 VGSIESQWALAGHRLTALSEQQLVSCDDK---------DSGCGGGLMLQAFEWLLRNMNG 206

Query: 225 GVEREKDYPYTGTDG--GSCKFDKSKIAAA-VSNFSVISSDEDQMAANLVKHGPLAVGIN 281
            +  E  YPY  + G    C      +  A +  +  I S E  MAA L K+GP+++ ++
Sbjct: 207 TMFTEDSYPYVSSSGYVPECSNSSQLVPGARIDGYMTIESSETVMAAWLAKNGPISIAVD 266

Query: 282 AVWMQTYIGGV--SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGE 339
           A    +Y  GV  SC    G  L+HGVL+VGY  +G       E PYW+IKNSWGE+WGE
Sbjct: 267 ASSFMSYESGVLTSC---AGITLNHGVLLVGYNMTG-------EVPYWVIKNSWGEDWGE 316

Query: 340 NGYYKICMGRNVC 352
           NGY ++ MG N C
Sbjct: 317 NGYVRVTMGVNAC 329


>gi|302845628|ref|XP_002954352.1| hypothetical protein VOLCADRAFT_76255 [Volvox carteri f.
           nagariensis]
 gi|300260282|gb|EFJ44502.1| hypothetical protein VOLCADRAFT_76255 [Volvox carteri f.
           nagariensis]
          Length = 489

 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 129/331 (38%), Positives = 185/331 (55%), Gaps = 31/331 (9%)

Query: 40  EQSEDHLLNAEHH----FSLFKSKFSKTYATQ-EEHDYRFRVFKANLRRAKRRQLLDPTA 94
           EQ E  LL+A+ +    F  +  +++K YA   +E + RF V+  NL           + 
Sbjct: 28  EQHEKLLLDAKANPMAAFQQWMMQYTKAYANDIKELETRFSVWLENLNYILAYNARTTSH 87

Query: 95  VHGVTKFSDLTPSEFRRQFLGLNRRLRLPADA-QKAPIL----PTNDLPTDFDWRDHGAV 149
              +  F+DLT  EFR + LG + + R  ++  Q +P +      N LPT+ DWR  GAV
Sbjct: 88  WLHLNAFADLTTDEFRNR-LGYDFKARQASNRLQSSPFIYDNVDANQLPTEIDWRKKGAV 146

Query: 150 TGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCN 209
           T VK+QG CGSCW+F+ TG++EG + + TGEL SLSEQ+LVDCD +         D GC+
Sbjct: 147 TEVKNQGQCGSCWAFATTGSVEGINAIVTGELASLSEQELVDCDTD--------EDRGCS 198

Query: 210 GGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAAN 269
           GGLM+ A+++I+K GG++ E DYPYT  DG      K++    +  +  I  +++     
Sbjct: 199 GGLMDYAYQWIIKNGGLDTEDDYPYTAEDGVCVAAKKNRRVVTIDGYVDIPENDEVALKK 258

Query: 270 LVKHGPLAVGI--NAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYW 327
              H P+AV I  +A   Q Y GGV     CG  L+HGVL+VGYG        F    YW
Sbjct: 259 AAAHQPIAVAIEADAKSFQLYGGGVYDDPTCGTSLNHGVLVVGYGKDP----HFGN--YW 312

Query: 328 IIKNSWGENWGENGYYKICMG----RNVCGV 354
           I+KNSWG  WG+NGY ++ MG    + +CG+
Sbjct: 313 IVKNSWGPEWGDNGYIRLRMGAEDVQGMCGI 343


>gi|6650705|gb|AAF21977.1|AF115280_1 thiolproteinase SmTP1 [Sarcocystis muris]
          Length = 394

 Score =  212 bits (539), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 134/346 (38%), Positives = 183/346 (52%), Gaps = 31/346 (8%)

Query: 19  ASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFK 78
           AS  ++ D DA      P    + +DH   ++  F  F+   +K YAT+EE   R+ +FK
Sbjct: 61  ASPSSITDGDAKY----PEKIWEWKDHHFQSQ--FYQFQRDHNKFYATEEERLKRYAIFK 114

Query: 79  ANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNR-RLRLPADAQKAPI--LPTN 135
            NL       +   + V  + KF DLT  EFR+++LG  +  LR P       +  +  N
Sbjct: 115 NNLTYIHNHNMQGYSYVLKMNKFGDLTLEEFRQRYLGYKKPDLRTPPREVDTTLESVEDN 174

Query: 136 DLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHE 195
           D+PT  DWR  G VT VKDQG CGSCW+FSATGA+EG +   TG+LV+LS+QQLVDC   
Sbjct: 175 DIPTHVDWRQRGCVTSVKDQGDCGSCWAFSATGAMEGVYCAKTGKLVNLSQQQLVDCSRF 234

Query: 196 CDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSN 255
                    + GC+GG M  AFEY+++ GG+   ++YPY   D G CK  +    A ++ 
Sbjct: 235 LG-------NQGCDGGRMEEAFEYVVENGGICSGENYPYMRKD-GVCKSSQCTSVATITG 286

Query: 256 F-SVISSDEDQMAANLVKHGPLAVGI--NAVWMQTYIGGV-SCPYICGKYLDHGVLIVGY 311
           + SV    E  M   L    P++V I  N    Q Y  G+   P  CG  LDHGVL+VGY
Sbjct: 287 YRSVPRRSEKSMKTALALRSPVSVAIQANQAAFQFYYDGIFDAP--CGTNLDHGVLLVGY 344

Query: 312 GSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR---NVCGV 354
            +         +  YWI+KNSWG  WG+ GY  + M +     CGV
Sbjct: 345 SAETAG-----QGDYWIMKNSWGAAWGKGGYMLMAMHKGPAGQCGV 385


>gi|356508487|ref|XP_003522988.1| PREDICTED: xylem cysteine proteinase 2-like [Glycine max]
          Length = 349

 Score =  212 bits (539), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 134/362 (37%), Positives = 196/362 (54%), Gaps = 33/362 (9%)

Query: 7   SSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYAT 66
           S  L L  S  L +++AV  D +++     S+  +S D L+     F  + S+  K Y +
Sbjct: 6   SKALFLACSFCLFASLAVAGDFSIVG--YSSEDLKSMDKLIEL---FESWMSRHGKIYQS 60

Query: 67  QEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADA 126
            EE  +RF +FK NL+    R  +      G+ +F+DL+  EF+ ++LGL        ++
Sbjct: 61  IEEKLHRFDIFKDNLKHIDERNKVVSNYWLGLNEFADLSHQEFKNKYLGLKVDYSRRRES 120

Query: 127 QKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSE 186
            +       +LP   DWR  GAVT VK+QG+CGSCW+FS   A+EG + + TG L SLSE
Sbjct: 121 PEEFTYKDFELPKSVDWRKKGAVTQVKNQGSCGSCWAFSTVAAVEGINQIVTGNLTSLSE 180

Query: 187 QQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDK 246
           Q+L+DCD         + ++GCNGGLM+ AF +I++ GG+ +E+DYPY   + G+C+  K
Sbjct: 181 QELIDCDR--------TYNNGCNGGLMDYAFSFIVENGGLHKEEDYPYI-MEEGTCEMTK 231

Query: 247 SKI-AAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKYLD 303
            +     +S +  +  + +Q     + + PL+V I A     Q Y GGV   + CG  LD
Sbjct: 232 EETEVVTISGYHDVPQNNEQSLLKALVNQPLSVAIEASGRDFQFYSGGVFDGH-CGSDLD 290

Query: 304 HGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRN------VCGVDSM 357
           HGV  VGYG+S       K   Y I+KNSWG  WGE GY  I M RN      +CG+  M
Sbjct: 291 HGVAAVGYGTS-------KGVNYIIVKNSWGSKWGEKGY--IRMRRNIGKPEGICGIYKM 341

Query: 358 VS 359
            S
Sbjct: 342 AS 343


>gi|378943048|gb|AFC76265.1| cathepsin L-like protease [Leishmania major]
          Length = 348

 Score =  212 bits (539), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 127/312 (40%), Positives = 172/312 (55%), Gaps = 32/312 (10%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           F  FK  + + Y T  E   R   F+ NL   +  Q  +P A  G+TKF DL+ + F  +
Sbjct: 38  FEEFKRTYQRAYGTLTEEQRRLANFERNLELMREHQARNPHARFGITKFFDLSEAVFAAR 97

Query: 113 FLGLNRRLRLPADAQKA------PILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSA 166
           +L  N      A  Q A           + +P   DWR+ GAVT VK+QGACGSCW+FSA
Sbjct: 98  YL--NGAAYFAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSCWAFSA 155

Query: 167 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK--AG 224
            G +E    ++  +LV LSEQQLV CDH          D+GC GGLM  AFE++L+   G
Sbjct: 156 VGNIESQWAVAGHKLVRLSEQQLVSCDH---------VDNGCGGGLMLQAFEWVLRNMNG 206

Query: 225 GVEREKDYPYTGTDGG--SCKFDKSKIA--AAVSNFSVISSDEDQMAANLVKHGPLAVGI 280
            V  EK YPY   +G    C  + S++A  A +  +  + S E  MAA L K+GP+++ +
Sbjct: 207 TVFTEKSYPYVSGNGDVPECS-NSSELAPGARIDGYVSMESSERVMAAWLAKNGPISIAV 265

Query: 281 NAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGEN 340
           +A    +Y  GV    I G+ L+HGVL+VGY  +G       E PYW+IKNSWGE+WGE 
Sbjct: 266 DASSFMSYHSGVLTSCI-GEQLNHGVLLVGYNMTG-------EVPYWVIKNSWGEDWGEK 317

Query: 341 GYYKICMGRNVC 352
           GY ++ MG N C
Sbjct: 318 GYVRVTMGVNAC 329


>gi|405971604|gb|EKC36431.1| Cathepsin L [Crassostrea gigas]
          Length = 384

 Score =  212 bits (539), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 143/372 (38%), Positives = 197/372 (52%), Gaps = 41/372 (11%)

Query: 11  LLLLSSVLA--SAVAVNDDDAMIRQVVPSDGEQSEDHLLNA---------EHHFSLFKSK 59
           +L + SVLA  S   V +++     +  +     + H+L A         E  +  FK  
Sbjct: 26  VLWIVSVLAVVSGANVQNENVQWFDLESAQKHPEQLHILKAQTGINYQPYEQAWKEFKIL 85

Query: 60  FSKTYATQEEHDYRFRVFKANLRRAKRRQLL----DPTAVHGVTKFSDLTPSEFRRQFLG 115
             K+Y   EE   RF +F+ N+ R ++   L      +   GV +F+DL  +EF   F G
Sbjct: 86  HDKSYEDHEEESRRFEIFRENVLRIEKHNKLFHLGKKSYYLGVNQFTDLEYAEFV-NFNG 144

Query: 116 LNRRLRLPADAQKAPILPTNDL--PTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGA 173
           L  ++    + + +  L  N++  P   DWR  G VT VK+QGACGSCW+FSATG+LEG 
Sbjct: 145 L--KMTNLNNTKCSSHLSANNIVVPDSVDWRSKGYVTKVKNQGACGSCWAFSATGSLEGQ 202

Query: 174 HFLSTGELVSLSEQQLVDCDHECDPEESGSC-DSGCNGGLMNSAFEYILKAGGVEREKDY 232
           +F   G+LV LSE QLVDC        SGS  + GCNGG M +AF+Y+   GG+E E DY
Sbjct: 203 YFRKNGKLVPLSESQLVDC--------SGSFGNEGCNGGFMENAFKYVKSVGGIESESDY 254

Query: 233 PYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVGINA--VWMQTYI 289
           PY      +C FDK+K+ A VS    V S  E  +   + + GP++V I+A     Q Y 
Sbjct: 255 PYKARQ-RTCAFDKTKVIATVSGCVDVESGSESSLKEVVSEVGPVSVAIDAGHSSFQLYA 313

Query: 290 GGVSCPYICG-KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMG 348
           GGV    +C    L+HGVL VGYG+S       + K YWI+KNSWG  WG  GY K+   
Sbjct: 314 GGVYDEPLCSTSRLNHGVLCVGYGTS------LQGKDYWIVKNSWGVRWGVEGYIKMSRN 367

Query: 349 R-NVCGVDSMVS 359
           + N CG+ S  S
Sbjct: 368 KNNQCGIASEAS 379


>gi|402770505|gb|AFQ98387.1| cathepsin L [Rhipicephalus microplus]
          Length = 332

 Score =  212 bits (539), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 136/321 (42%), Positives = 169/321 (52%), Gaps = 31/321 (9%)

Query: 52  HFSLFKSKFSKTYATQEEHDYRFRVFKAN-LRRAKRRQLLDPTAVH---GVTKFSDLTPS 107
            +  FK+   KTY +  E   RF++F  N L  AK         V    G+ +F DL   
Sbjct: 26  QWEAFKTTHKKTYQSHMEELLRFKIFTENSLIIAKHNAKYAKGLVSYKLGMNQFGDLLAH 85

Query: 108 EFRRQFLGLNRRLRLPADAQKAPILPTND--LPTDFDWRDHGAVTGVKDQGACGSCWSFS 165
           EF R F G +R  R    +   P    ND  LP   DWR  GAVT VKDQG CGSCW+FS
Sbjct: 86  EFARIFNG-HRGTRKTGGSTFLPPANVNDSSLPKAVDWRKKGAVTPVKDQGQCGSCWAFS 144

Query: 166 ATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGG 225
           ATG+LEG HFL  GELVSLSEQ LVDC            ++GC GGLM  AF+YI    G
Sbjct: 145 ATGSLEGQHFLKNGELVSLSEQNLVDCSQSFG-------NNGCEGGLMEDAFKYIKANDG 197

Query: 226 VEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISS-DEDQMAANLVKHGPLAVGINAVW 284
           ++ EK YPY   D G C+F K  + A  + +  I +  E  +   +   GP++V I+A  
Sbjct: 198 IDTEKSYPYEAVD-GECRFKKEDVGATDTGYVEIKAGSEVDLKKAVATVGPISVAIDASH 256

Query: 285 --MQTYIGGV-SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENG 341
              Q Y  GV   P    + LDHGVL+VGYG  G        K YW++KNSW E+WG+ G
Sbjct: 257 SSFQLYSEGVYDEPECSSEDLDHGVLVVGYGVKG-------GKKYWLVKNSWAESWGDQG 309

Query: 342 YYKICMGR---NVCGVDSMVS 359
           Y  I M R   N CG+ S  S
Sbjct: 310 Y--ILMSRDNNNQCGIASQAS 328


>gi|332326589|gb|AEE42618.1| cysteine protease [Leishmania aethiopica]
          Length = 443

 Score =  212 bits (539), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 127/313 (40%), Positives = 167/313 (53%), Gaps = 34/313 (10%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           F  FK  + + Y T  E   R   F+ NL   +  Q  +P A  G+TKF DL+ +EF  +
Sbjct: 38  FEEFKRTYWRVYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 113 FLGLNRRLRLPADAQKA------PILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSA 166
           +L  N      A  Q A           + +P   DWR+ GAVT VKDQGACGSCW+FSA
Sbjct: 98  YL--NGAAYFAAAKQHAGQHHRKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAFSA 155

Query: 167 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK--AG 224
            G +E    ++   L +LSEQQLV CD +         DSGCNGGLM  AFE++L+   G
Sbjct: 156 VGNIESQWAVAGHRLTALSEQQLVSCDDK---------DSGCNGGLMTQAFEWLLRNMNG 206

Query: 225 GVEREKDYPYTGTDGG--SCKFDKSKIAAA-VSNFSVISSDEDQMAANLVKHGPLAVGIN 281
            +  E  YPY  + G    C      +  A +  +  I S E  MAA L K GP+++ ++
Sbjct: 207 TMLTEDSYPYVSSTGDVPECTNSSQLVPGARIDGYVTIESSETVMAAWLAKSGPISIAVD 266

Query: 282 AVWMQTYIGGV--SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGE 339
           A    +Y  GV  SC    G  L+HGVL+VGY  +G       E PYW+IKNSWGE+WGE
Sbjct: 267 ASSFMSYESGVLTSC---AGDALNHGVLLVGYNRTG-------EVPYWVIKNSWGEDWGE 316

Query: 340 NGYYKICMGRNVC 352
            GY ++ MG N C
Sbjct: 317 KGYVRVTMGVNAC 329


>gi|357474523|ref|XP_003607546.1| Cysteine proteinase [Medicago truncatula]
 gi|358347207|ref|XP_003637651.1| Cysteine proteinase [Medicago truncatula]
 gi|355503586|gb|AES84789.1| Cysteine proteinase [Medicago truncatula]
 gi|355508601|gb|AES89743.1| Cysteine proteinase [Medicago truncatula]
          Length = 345

 Score =  212 bits (539), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 124/360 (34%), Positives = 191/360 (53%), Gaps = 30/360 (8%)

Query: 1   MERLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKF 60
           M   IL++ + +LL       +A   +        P   +Q    +   +  F  +  + 
Sbjct: 1   MTSTILTTTIFILLMLCNTCVIASESE-------CPPTHKQKSSDVEAMKKRFDGWVKRH 53

Query: 61  SKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRL 120
            + Y   +E + RF +++AN++  + +     +      KF+DLT  EF+  ++GL+ RL
Sbjct: 54  GRKYKHNDEREVRFGIYQANVQYIQCKNAQKNSYNLTDNKFADLTNEEFQSTYMGLSTRL 113

Query: 121 RLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGE 180
           R      +       DLP   DWR  GAVT + DQG CG CW+F+A  A+EG + + +G+
Sbjct: 114 RSHNTGFRYD--EHGDLPESKDWRKEGAVTEIMDQGQCGGCWAFAAVAAVEGINKIKSGK 171

Query: 181 LVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGG 240
           L+SLSEQ+L+DCD +       S + GC GGLM +A+ +I++ GG+  E+DYPY G D G
Sbjct: 172 LISLSEQELIDCDVK-------SGNQGCQGGLMETAYTFIIENGGLTTEQDYPYEGVD-G 223

Query: 241 SCKFDK-SKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSCPYI 297
           +CK +K +  AA++S +  + +D +        H P++V I+A     Q Y  GV    I
Sbjct: 224 TCKMEKAAHYAASISGYEEVPADNEAKLKAAAAHQPVSVAIDAGGYSFQFYSEGVFSG-I 282

Query: 298 CGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSM 357
           CGK L+HGV +VGYG             YWI+KNSWG +WGE+GY  I M R+    + M
Sbjct: 283 CGKQLNHGVTVVGYGKETI-------NKYWIVKNSWGADWGESGY--IRMKRDTLSKEGM 333


>gi|302763109|ref|XP_002964976.1| hypothetical protein SELMODRAFT_83176 [Selaginella moellendorffii]
 gi|302763113|ref|XP_002964978.1| hypothetical protein SELMODRAFT_83554 [Selaginella moellendorffii]
 gi|300167209|gb|EFJ33814.1| hypothetical protein SELMODRAFT_83176 [Selaginella moellendorffii]
 gi|300167211|gb|EFJ33816.1| hypothetical protein SELMODRAFT_83554 [Selaginella moellendorffii]
          Length = 300

 Score =  212 bits (539), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 123/316 (38%), Positives = 174/316 (55%), Gaps = 31/316 (9%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLL-DPTAVHGVTKFSDLTPSEFRR 111
           F  + +K  K+Y++  E   R  VF   L   ++     + T   G+ KFSDLT +EFR 
Sbjct: 2   FEDWAAKHDKSYSSDWEKARRLMVFSDTLAYIEKHNAQPNTTFTLGLNKFSDLTNAEFRA 61

Query: 112 QFLGLNRRLRLPADAQKAPI----LPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSAT 167
            ++G   + + P    + P     +  + LPT  DWR  GAVT +KDQG CGSCW+FSA 
Sbjct: 62  NYVG---KFKPPRYQDRRPAKDVDVDVSSLPTSLDWRQEGAVTPIKDQGQCGSCWAFSAI 118

Query: 168 GALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVE 227
            ++E AHFL+T ELVSLSEQQL+DCD         + D GC GG  + AF+++++ GGV 
Sbjct: 119 ASIESAHFLATKELVSLSEQQLIDCD---------TVDQGCQGGFPDDAFKFVVENGGVT 169

Query: 228 REKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGI--NAVWM 285
            E+ YPYTG   GSC  +K+K+   ++ +  ++ D        V   P+ VGI  +    
Sbjct: 170 TEEAYPYTGF-AGSCNTNKNKV-VEITGYKDVTKDSADALMKAVSKTPVTVGICGSDQNF 227

Query: 286 QTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKI 345
           Q Y  G+     C    DH VL++GYG+ G         PYWIIKNSWG +WGE+G+ KI
Sbjct: 228 QNYRSGILSGQCCNS-RDHAVLVIGYGTEG-------GMPYWIIKNSWGTSWGEDGFMKI 279

Query: 346 CM--GRNVCGVDSMVS 359
               G  +CG++   S
Sbjct: 280 KKKDGEGMCGMNGQSS 295


>gi|33112581|gb|AAP94046.1| cathepsin-L-like cysteine peptidase 02 [Tenebrio molitor]
          Length = 337

 Score =  212 bits (539), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 133/334 (39%), Positives = 179/334 (53%), Gaps = 26/334 (7%)

Query: 39  GEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRR-AKRRQLLDPTAVH- 96
           G Q+       +  +  FK   +K Y +  E  +R ++F  N    AK  +L     V  
Sbjct: 13  GSQAVSFFDLVQEQWGAFKMTHNKQYQSDTEERFRMKIFMENSHTVAKHNKLYAQGLVSF 72

Query: 97  --GVTKFSDLTPSEFRRQFLGLNRR---LRLPADAQKAPILPTND--LPTDFDWRDHGAV 149
             G+ K++D+   EF +   G NR    LR          LP  +  LP   DWRD GAV
Sbjct: 73  KLGINKYADMLHHEFVQVLNGFNRTKSGLRSGESDDSVTFLPPANVQLPGQIDWRDKGAV 132

Query: 150 TGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCN 209
           T VKDQG CGSCWSFSATG+LEG HF  +G+LVSLSEQ LVDC      E+ G  ++GCN
Sbjct: 133 TPVKDQGQCGSCWSFSATGSLEGQHFRKSGKLVSLSEQNLVDC-----SEKFG--NNGCN 185

Query: 210 GGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAAN 269
           GGLM++AF YI   GG++ E+ YPY   D       K+K A       + S +ED++ + 
Sbjct: 186 GGLMDNAFRYIKANGGIDTEQAYPYKAEDEKCHYKPKNKGATDRGYVDIESGNEDKLQSA 245

Query: 270 LVKHGPLAVGINAVW--MQTYIGGVSC-PYICGKYLDHGVLIVGYGSSGFAPIRFKEKPY 326
           +   GP++V I+A     Q Y GGV   P      LDHGVL+VGYG+            Y
Sbjct: 246 VATVGPVSVAIDASHQSFQLYSGGVYYEPECSPSQLDHGVLVVGYGTEDDGT------DY 299

Query: 327 WIIKNSWGENWGENGYYKICMGR-NVCGVDSMVS 359
           W++KNSWG++WG+ GY K+   R N CG+ +  S
Sbjct: 300 WLVKNSWGKSWGDQGYIKMARNRDNNCGIATEAS 333


>gi|332326593|gb|AEE42620.1| cysteine protease [Leishmania aethiopica]
          Length = 443

 Score =  211 bits (538), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 127/313 (40%), Positives = 167/313 (53%), Gaps = 34/313 (10%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           F  FK  + + Y T  E   R   F+ NL   +  Q  +P A  G+TKF DL+ +EF  +
Sbjct: 38  FEEFKRTYWRVYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 113 FLGLNRRLRLPADAQKA------PILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSA 166
           +L  N      A  Q A           + +P   DWR+ GAVT VKDQGACGSCW+FSA
Sbjct: 98  YL--NGAAYFAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAFSA 155

Query: 167 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK--AG 224
            G +E    ++   L +LSEQQLV CD +         DSGC GGLM  AFE++L+   G
Sbjct: 156 VGNIESQWAVAGHRLTALSEQQLVSCDDK---------DSGCGGGLMTQAFEWLLRNMNG 206

Query: 225 GVEREKDYPYTGTDGG--SCKFDKSKIAAA-VSNFSVISSDEDQMAANLVKHGPLAVGIN 281
            +  E  YPY  + G    C      +  A +  +  I S E  MAA L K GP+++G++
Sbjct: 207 TMFTEDSYPYVSSXGDVPECTNSSQLVPGARIDGYVTIESSETVMAAWLAKSGPISIGVD 266

Query: 282 AVWMQTYIGGV--SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGE 339
           A    +Y  GV  SC    G  L+HGVL+VGY  +G       E PYW+IKNSWGE+WGE
Sbjct: 267 ASSFMSYESGVLTSC---AGBXLNHGVLLVGYNXTG-------EVPYWVIKNSWGEDWGE 316

Query: 340 NGYYKICMGRNVC 352
            GY ++ MG N C
Sbjct: 317 KGYVRVAMGVNAC 329


>gi|195583187|ref|XP_002081405.1| GD10995 [Drosophila simulans]
 gi|194193414|gb|EDX06990.1| GD10995 [Drosophila simulans]
          Length = 341

 Score =  211 bits (538), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 133/320 (41%), Positives = 175/320 (54%), Gaps = 30/320 (9%)

Query: 56  FKSKFSKTYATQEEHDYRFRVFKANLRR-AKRRQLLDPTAVH---GVTKFSDLTPSEFRR 111
           FK +  K Y    E  +R ++F  N  + AK  Q      V     V K++DL   EFR+
Sbjct: 32  FKLEHRKNYQDDTEERFRLKIFNENKHKIAKHNQRFAEGKVSFKLAVNKYADLLHHEFRQ 91

Query: 112 QFLGLN----RRLRLPADAQKAP--ILPTN-DLPTDFDWRDHGAVTGVKDQGACGSCWSF 164
              G N    ++LR   ++ K    I P +  LP   DWR  GAVT VKDQG CGSCW+F
Sbjct: 92  LMNGFNYTLHKQLRAADESFKGVTFISPAHVTLPKSVDWRTKGAVTAVKDQGHCGSCWAF 151

Query: 165 SATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAG 224
           S+TGALEG HF  +G LVSLSEQ LVDC        +   ++GCNGGLM++AF YI   G
Sbjct: 152 SSTGALEGQHFRKSGVLVSLSEQNLVDC-------STKYGNNGCNGGLMDNAFRYIKDNG 204

Query: 225 GVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVI-SSDEDQMAANLVKHGPLAVGINAV 283
           G++ EK YPY   D  SC F+K  I A    F+ I   DE +MA  +   GP++V I+A 
Sbjct: 205 GIDTEKSYPYEAID-DSCHFNKGTIGATDRGFTDIPQGDEKKMAEAVATVGPVSVAIDAS 263

Query: 284 W--MQTYIGGV-SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGEN 340
               Q Y  GV + P    + LDHGVL+VG+G+            YW++KNSWG  WG+ 
Sbjct: 264 HESFQFYSEGVYNEPQCDAQNLDHGVLVVGFGTDESGD------DYWLVKNSWGTTWGDK 317

Query: 341 GYYKICMGR-NVCGVDSMVS 359
           G+ K+   + N CG+ S  S
Sbjct: 318 GFIKMLRNKENQCGIASASS 337


>gi|292397748|ref|YP_003517814.1| cathepsin [Lymantria xylina MNPV]
 gi|291065465|gb|ADD73783.1| cathepsin [Lymantria xylina MNPV]
          Length = 335

 Score =  211 bits (538), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 122/329 (37%), Positives = 183/329 (55%), Gaps = 30/329 (9%)

Query: 45  HLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRR--AKRRQLLD-PTAVHGVTKF 101
           +L  A  +F  F   ++K Y +  E + R+ +FK NL    AK     D PTA +G+ KF
Sbjct: 27  NLQRAPDYFESFVENYNKNYTSDWEKNKRYSIFKDNLHEINAKNGNATDGPTATYGINKF 86

Query: 102 SDLTPSEFRRQFLGLNRRLRLPADAQKAPIL--PTNDLPTDFDWRDHGAVTGVKDQGACG 159
           SDL+ SE   +F GL+   R  ++  K  +L  P +  P  FDWR+   VT +K+QGACG
Sbjct: 87  SDLSKSELIAKFTGLSIPQR-ASNFCKTIVLNQPPDKGPLHFDWREQNKVTSIKNQGACG 145

Query: 160 SCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEY 219
           +CW+F+   ++E    +    LV LSEQQL+DCD         S D GCNGGL+++AFE 
Sbjct: 146 ACWAFATLASVESQFAMRHNRLVDLSEQQLIDCD---------SVDMGCNGGLLHTAFEE 196

Query: 220 ILKAGGVEREKDYPYTGTDGGSCKFDKSK--IAAAVSNFSVISSDEDQMAANLVKHGPLA 277
           I++ GGV+ E DYP+ G D   C  D+ +  + + V  +  +  +E+++   L   GP+ 
Sbjct: 197 IIRMGGVQAELDYPFVGRD-RRCGVDRHRPYVVSLVGCYRYVMVNEEKLKDLLRAVGPIP 255

Query: 278 VGINAVWMQTYIGGV--SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGE 335
           + I+A  +  Y  GV  SC       L+H VL+VGYG            PYW  KN+WG+
Sbjct: 256 MAIDAADIVNYYRGVISSCE---NNGLNHAVLLVGYGVENGV-------PYWAFKNTWGD 305

Query: 336 NWGENGYYKICMGRNVCGVDSMVSSVAAI 364
           +WGENGY+++    N CG+ + ++S A +
Sbjct: 306 DWGENGYFRVRQNINACGMVNDLASTAVL 334


>gi|157868354|ref|XP_001682730.1| cysteine peptidase A (CPA) [Leishmania major strain Friedlin]
 gi|68126185|emb|CAJ07238.1| cysteine peptidase A (CPA) [Leishmania major strain Friedlin]
          Length = 354

 Score =  211 bits (538), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 124/311 (39%), Positives = 170/311 (54%), Gaps = 25/311 (8%)

Query: 49  AEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVT-KFSDLTPS 107
           A  H+  FK +  K++    +  +RF  FK N++ A      +P A + V+ KF+DLTP 
Sbjct: 38  ASAHYGRFKERHGKSFGEDADEGHRFNAFKQNMQTAYFLNTHNPHAHYDVSGKFADLTPQ 97

Query: 108 EFRRQFLGLNRRLRLPADAQKAPILPTNDL--PTDFDWRDHGAVTGVKDQGACGSCWSFS 165
           EF + +L  +       D ++   +  + L      DWR+ GAVT VK+QG CGSCW+FS
Sbjct: 98  EFAKLYLNPDYYAHRGKDYKEHVHVDDSVLSGAMSVDWREKGAVTPVKNQGMCGSCWAFS 157

Query: 166 ATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK--A 223
           A G +E    L    LVSLSEQ LV CD           D GCNGGLM+ A E+I++   
Sbjct: 158 AIGNIESQWALKNHSLVSLSEQMLVSCD---------DIDDGCNGGLMDQAMEWIIQHHN 208

Query: 224 GGVEREKDYPYTGTDGGSCK-FDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA 282
           G V  EK YPY    G S    DK +  A +S +  +  DE  +AA + K GP+AV ++A
Sbjct: 209 GTVPTEKSYPYASAGGTSPPCHDKGEFGARISGYMSLPHDEKAIAAYVEKKGPVAVAVDA 268

Query: 283 VWMQTYIGGVSCPYIC-GKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENG 341
              Q Y GGV    +C G  L+HGVL+VG+        +  + PYWI+KNSWG +WGE G
Sbjct: 269 TTWQLYFGGVVT--LCFGLSLNHGVLVVGFN-------KRAKPPYWIVKNSWGTSWGEKG 319

Query: 342 YYKICMGRNVC 352
           Y ++ MG N C
Sbjct: 320 YIRLAMGSNQC 330


>gi|440792185|gb|ELR13413.1| cathepsin L, putative [Acanthamoeba castellanii str. Neff]
          Length = 331

 Score =  211 bits (537), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 116/315 (36%), Positives = 169/315 (53%), Gaps = 21/315 (6%)

Query: 51  HHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQL-LDPTAVHGVTKFSDLTPSEF 109
             F+ F  ++ K+YA+ EE + RF +F  NL       +  +     G+TKF+D++  EF
Sbjct: 32  EQFNAFVQRYGKSYASAEEAEQRFAIFTQNLAETAALNIKYEGKTQFGITKFADMSQEEF 91

Query: 110 RRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDH-GAVTGVKDQGACGSCWSFSATG 168
           + + L  N          + P       P+ FDWR+  G VT V DQG CGSCW+FSAT 
Sbjct: 92  QSRVLMSNPPPPPTEKPYRGPKFEGFTAPSTFDWRNKPGVVTPVYDQGQCGSCWAFSATE 151

Query: 169 ALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVER 228
            +E    L+  +L  LS QQ+VDC            D GC GG  + A++Y++ A G++ 
Sbjct: 152 NIESQWALAGHKLTGLSMQQIVDCSW---------WDDGCGGGFPSYAYDYVIDAPGLDA 202

Query: 229 EKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSD--EDQMAANLVKHGPLAVGINAVWMQ 286
             +YPYT   GGSC F +S++ A +S+++  ++D  E QMA  L +HGP++V ++A    
Sbjct: 203 LANYPYTAV-GGSCAFKESQVVAKISSWTYTTTDSNEHQMANYLAQHGPISVCVDAESWP 261

Query: 287 TYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKIC 346
           +Y GGV     CG  +DH VL VGY  +          PYWII+NSWG +WG  GY  + 
Sbjct: 262 SYTGGVYRASACGTSIDHCVLAVGYNLTA-------NPPYWIIRNSWGTSWGLEGYMHLE 314

Query: 347 MGRNVCGVDSMVSSV 361
            G + C V  M +S 
Sbjct: 315 FGTDACAVAEMTTSA 329


>gi|356565778|ref|XP_003551114.1| PREDICTED: thiol protease aleurain-like [Glycine max]
          Length = 353

 Score =  211 bits (537), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 139/345 (40%), Positives = 185/345 (53%), Gaps = 33/345 (9%)

Query: 26  DDDAMIRQVVPSDGEQSEDHLLNAEHH---FSLFKSKFSKTYATQEEHDYRFRVFKANLR 82
           DD   IR  + SD E     ++    H   F+ F  +  K Y + +E   RFR+F  NL+
Sbjct: 26  DDANPIR--LASDLESQVLDVIGQSRHALSFARFARRHGKRYRSVDEIRNRFRIFSDNLK 83

Query: 83  RAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFD 142
             +       T   GV  F+D T  EF R  LG  +     A  +    L    LP + D
Sbjct: 84  LIRSTNRRSLTYTLGVNHFADWTWEEFTRHKLGAPQNC--SATLKGNHRLTDAVLPDEKD 141

Query: 143 WRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESG 202
           WR  G V+ VKDQG CGSCW+FS TGALE A+  + G+ +SLSEQQLVDC        +G
Sbjct: 142 WRKEGIVSQVKDQGNCGSCWTFSTTGALEAAYAQAFGKNISLSEQQLVDC--------AG 193

Query: 203 SCDS-GCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAV---SNFSV 258
           + ++ GCNGGL + AFEYI   GG++ E+ YPYTG D G CKF    +A  V    N ++
Sbjct: 194 AFNNFGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKD-GVCKFTAKNVAVRVIDSINITL 252

Query: 259 ISSDEDQMAANLVKHGPLAVGIN-AVWMQTYIGGVSCPYICGKY---LDHGVLIVGYGSS 314
            + DE + A   V+  P++V    A   + Y  GV    ICG     ++H VL VGYG  
Sbjct: 253 GAEDELKQAVAFVR--PVSVAFEVAKDFRFYNNGVYTSTICGSTPMDVNHAVLAVGYGVE 310

Query: 315 GFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVS 359
                     PYWIIKNSWG NWG+NGY+K+ +G+N+CGV +  S
Sbjct: 311 -------DGVPYWIIKNSWGSNWGDNGYFKMELGKNMCGVATCAS 348


>gi|158524604|gb|ABW71226.1| cysteine protease [Nicotiana tabacum]
          Length = 360

 Score =  211 bits (537), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 134/344 (38%), Positives = 189/344 (54%), Gaps = 36/344 (10%)

Query: 31  IRQVVPSDGEQSEDHLLN----AEHHFSL--FKSKFSKTYATQEEHDYRFRVFKANLRRA 84
           IRQVV     + E+ +L     + H  S   F  ++ K Y + EE   RF VF  NL+  
Sbjct: 33  IRQVVSDGLHELENGILQVVGQSRHALSFVRFAHRYGKRYESVEEIKQRFEVFLDNLKMI 92

Query: 85  KRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTND-LPTDFDW 143
           +       +   GV +F+DLT  EFRR  LG  +     +   K  +  TN  LP   DW
Sbjct: 93  RSHNKKGLSYKLGVNEFTDLTWDEFRRDRLGAAQNC---SATTKGNVKLTNAVLPETKDW 149

Query: 144 RDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGS 203
           R+ G V+ VK+QG CGSCW+FS TGALE A+  + G+ +SLSEQQLVDC        +G+
Sbjct: 150 REDGIVSPVKNQGKCGSCWTFSTTGALEAAYSQAFGKGISLSEQQLVDC--------AGA 201

Query: 204 CDS-GCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAV---SNFSVI 259
            ++ GCNGGL + AFEYI   GG++ E+ YPYTG + G CKF    +   V    N ++ 
Sbjct: 202 FNNFGCNGGLPSQAFEYIKSNGGLDTEEAYPYTGKN-GLCKFSSENVGVKVIDSVNITLG 260

Query: 260 SSDEDQMAANLVKHGPLAVGINAV-WMQTYIGGVSCPYICGKY---LDHGVLIVGYGSSG 315
           + DE + A  LV+  P+++    +   + Y  GV     CG     ++H VL VGYG   
Sbjct: 261 AEDELKYAVALVR--PVSIAFEVIKGFKQYKSGVYSSTECGNTPMDVNHAVLAVGYGVEN 318

Query: 316 FAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVS 359
                    PYW+IKNSWG +WG++GY+K+ MG+N+CG+ +  S
Sbjct: 319 GV-------PYWLIKNSWGADWGDDGYFKMEMGKNMCGIATCAS 355


>gi|194757786|ref|XP_001961143.1| GF13722 [Drosophila ananassae]
 gi|190622441|gb|EDV37965.1| GF13722 [Drosophila ananassae]
          Length = 417

 Score =  211 bits (537), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 129/316 (40%), Positives = 175/316 (55%), Gaps = 34/316 (10%)

Query: 62  KTYATQEEHDYRFRVFKANLRR-AKRRQLLDPTAVH---GVTKFSDLTPSEFRRQFLGLN 117
           K Y  + E  +R ++F  N  + AK  QL     V     V K++D+   EFR+   G N
Sbjct: 114 KNYLDETEERFRLKIFNENKHKIAKHNQLWASGKVSYKLAVNKYADMLHHEFRQLMNGFN 173

Query: 118 ----RRLRLPADAQKAPILPTND---LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGAL 170
               + LR   ++ K     + +   LP   DWRD GAVTGVKDQG CGSCW+FS+TGAL
Sbjct: 174 YTLHKELRAADESFKGVTFISPEHVTLPKSVDWRDKGAVTGVKDQGHCGSCWAFSSTGAL 233

Query: 171 EGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREK 230
           EG H+  +G LVSLSEQ LVDC        +   ++GCNGGLM++AF YI   GG++ EK
Sbjct: 234 EGQHYRKSGVLVSLSEQNLVDC-------STKYGNNGCNGGLMDNAFRYIKDNGGIDTEK 286

Query: 231 DYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVGINAVW--MQT 287
            YPY   D  SC F+K  I A    F  +   +E ++A  +   GP++V I+A     Q 
Sbjct: 287 SYPYEALD-DSCHFNKGTIGATDRGFVDIPQGNEKKLAEAVATIGPVSVAIDASHESFQF 345

Query: 288 YIGGVSCPYIC-GKYLDHGVLIVGYGS--SGFAPIRFKEKPYWIIKNSWGENWGENGYYK 344
           Y  GV     C  + LDHGVL+VG+G+  SG        + YW++KNSWG  WG+ G+ K
Sbjct: 346 YSEGVYVEPACDAQNLDHGVLVVGFGTDESG--------QDYWLVKNSWGTTWGDKGFIK 397

Query: 345 ICMGR-NVCGVDSMVS 359
           +   + N CG+ S  S
Sbjct: 398 MLRNKDNQCGIASASS 413


>gi|145334857|ref|NP_001078774.1| thiol protease aleurain [Arabidopsis thaliana]
 gi|332009932|gb|AED97315.1| thiol protease aleurain [Arabidopsis thaliana]
          Length = 361

 Score =  211 bits (537), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 134/342 (39%), Positives = 183/342 (53%), Gaps = 35/342 (10%)

Query: 26  DDDAMIRQVVPSDG----EQSEDHLLNAEHH---FSLFKSKFSKTYATQEEHDYRFRVFK 78
           D+   IR V  SDG    E+S   +L    H   F+ F  ++ K Y   EE   RF +FK
Sbjct: 27  DESNPIRMV--SDGLREVEESVSQILGQSRHVLSFARFTHRYGKKYQNVEEMKLRFSIFK 84

Query: 79  ANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLP 138
            NL   +       +   GV +F+DLT  EF+R  LG  +     A  + +  +    LP
Sbjct: 85  ENLDLIRSTNKKGLSYKLGVNQFADLTWQEFQRTKLGAAQNC--SATLKGSHKVTEAALP 142

Query: 139 TDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDP 198
              DWR+ G V+ VKDQG CGSCW+FS TGALE A+  + G+ +SLSEQQLVDC    + 
Sbjct: 143 ETKDWREDGIVSPVKDQGGCGSCWTFSTTGALEAAYHQAFGKGISLSEQQLVDCAGAFN- 201

Query: 199 EESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAV---SN 255
                 + GCNGGL + AFEYI   GG++ EK YPYTG D  +CKF    +   V    N
Sbjct: 202 ------NYGCNGGLPSQAFEYIKSNGGLDTEKAYPYTGKD-ETCKFSAENVGVQVLNSVN 254

Query: 256 FSVISSDEDQMAANLVKHGPLAVGINAVW-MQTYIGGVSCPYICGKY---LDHGVLIVGY 311
            ++ + DE + A  LV+  P+++    +   + Y  GV     CG     ++H VL VGY
Sbjct: 255 ITLGAEDELKHAVGLVR--PVSIAFEVIHSFRLYKSGVYTDSHCGSTPMDVNHAVLAVGY 312

Query: 312 GSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCG 353
           G            PYW+IKNSWG +WG+ GY+K+ MG+N+CG
Sbjct: 313 GVEDGV-------PYWLIKNSWGADWGDKGYFKMEMGKNMCG 347


>gi|1581747|prf||2117247C Cys protease:ISOTYPE=3
          Length = 469

 Score =  211 bits (537), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 125/318 (39%), Positives = 166/318 (52%), Gaps = 26/318 (8%)

Query: 52  HFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRR 111
            F+ FK +  K Y +  E  +R  VFK NL  A+     +P A  GVT FSDLT  EFR 
Sbjct: 37  QFAAFKQRHGKVYGSAAEETFRLGVFKENLLFARLHAAANPHASFGVTPFSDLTREEFRS 96

Query: 112 QF-----LGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSA 166
           ++          + R+    +    +     P   DWR  GAVT +KDQG C SCW+FS 
Sbjct: 97  RYHNAAAHFAAAQKRVRVPVEVEVEVEVGGAPAAVDWRARGAVTAIKDQGNCSSCWAFST 156

Query: 167 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA--G 224
            G +EG   L+   L  LSEQ LV CD+          D+GC+GGLM+SAF++I++   G
Sbjct: 157 IGNIEGQWHLAGNPLTGLSEQMLVSCDNA---------DNGCDGGLMDSAFDWIVEQNNG 207

Query: 225 GVEREKDYPYT--GTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA 282
            V  E  Y Y   G D  +C      + A +S    +  DED+MAA L  +GPLA+ ++A
Sbjct: 208 SVYTEASYSYVSGGGDSQTCDMSDHVVGAVISGHVDLPQDEDKMAAWLAVNGPLAIAVDA 267

Query: 283 VWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGY 342
               +Y GGV    +  + LDHGV++VGY  S          PYWIIKNSWG +WGE GY
Sbjct: 268 TSFMSYTGGVLTNCVSDQ-LDHGVVLVGYNDS-------SNPPYWIIKNSWGADWGEEGY 319

Query: 343 YKICMGRNVCGVDSMVSS 360
            +I  G N C V +   S
Sbjct: 320 IRIQKGTNQCLVKNYACS 337


>gi|402770509|gb|AFQ98389.1| cathepsin L [Rhipicephalus microplus]
          Length = 332

 Score =  211 bits (537), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 134/321 (41%), Positives = 171/321 (53%), Gaps = 31/321 (9%)

Query: 52  HFSLFKSKFSKTYATQEEHDYRFRVF-KANLRRAKRRQLLDPTAVH---GVTKFSDLTPS 107
            +  FK+   KTY +  E   RF++F +++L  A+         V    G+ +F DL   
Sbjct: 26  QWEAFKTTHKKTYQSHMEELLRFKIFTESSLIIARHNAKYAKGLVSYKLGMNQFGDLLAH 85

Query: 108 EFRRQFLGLNRRLRLPADAQKAPILPTND--LPTDFDWRDHGAVTGVKDQGACGSCWSFS 165
           EF R F G +   R    +   P    ND  LP   DWR  GAVT VKDQG CGSCW+FS
Sbjct: 86  EFARIFNG-HHGTRKTGGSTFLPPANVNDSSLPKAVDWRKKGAVTPVKDQGQCGSCWAFS 144

Query: 166 ATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGG 225
           ATG+LEG HFL  GELVSLSEQ LVDC            ++GC GGLM  AF+YI    G
Sbjct: 145 ATGSLEGQHFLKNGELVSLSEQNLVDCSQSFG-------NNGCEGGLMEDAFKYIKANDG 197

Query: 226 VEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISS-DEDQMAANLVKHGPLAVGINAVW 284
           ++ EK YPY   D G C+F K  + A  + +  I +  ED +   +   GP++V I+A  
Sbjct: 198 IDTEKSYPYEAVD-GECRFKKEDVGATDTGYVEIKAGSEDDLKKAVATVGPISVAIDASH 256

Query: 285 --MQTYIGGV-SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENG 341
              Q Y  GV   P    + LDHGVL+VGYG  G        K YW++KNSW E+WG+ G
Sbjct: 257 SSFQLYSEGVYDEPECSSEDLDHGVLVVGYGVKG-------GKKYWLVKNSWAESWGDQG 309

Query: 342 YYKICMGR---NVCGVDSMVS 359
           Y  I M R   N CG+ S  S
Sbjct: 310 Y--ILMSRDNNNQCGIASQAS 328


>gi|82659048|gb|ABB88697.1| cysteine protease [Leishmania tropica]
          Length = 443

 Score =  211 bits (537), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 127/313 (40%), Positives = 168/313 (53%), Gaps = 34/313 (10%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           F  FK  + + Y T  E   R   F+ NL   +  Q  +P A  G+TKF DL+ +EF  +
Sbjct: 38  FEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 113 FLGLNRRLRLPADAQKA------PILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSA 166
           +L  N      A  Q A           + +P   DWR  GAVT VKDQGACGSCW+FSA
Sbjct: 98  YL--NGAAYFAAAKQHAGQHYRKARADLSAVPDAVDWRKKGAVTPVKDQGACGSCWAFSA 155

Query: 167 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK--AG 224
            G++E    L+   L +LSEQQLV CD +         D+GC GGLM  AFE++L+   G
Sbjct: 156 VGSIESQWALAGHGLTALSEQQLVSCDDK---------DNGCGGGLMLQAFEWLLRNMNG 206

Query: 225 GVEREKDYPYTGTDG--GSCKFDKSKIAAA-VSNFSVISSDEDQMAANLVKHGPLAVGIN 281
            +  E  YPY  + G    C      +  A +  +  I S E  MAA L K+GP+++ ++
Sbjct: 207 TMFTEDSYPYVSSSGYVPECSNSSQLVPGARIDGYMTIESSETVMAAWLAKNGPISIAVD 266

Query: 282 AVWMQTYIGGV--SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGE 339
           A    +Y  GV  SC    G  L+HGVL+VGY  +G       E PYW+IKNSWGE+WGE
Sbjct: 267 ASSFMSYQSGVLTSC---AGDALNHGVLLVGYNRTG-------EVPYWVIKNSWGEDWGE 316

Query: 340 NGYYKICMGRNVC 352
           NGY ++ MG N C
Sbjct: 317 NGYVRVTMGVNAC 329


>gi|27728675|gb|AAO18731.1| cysteine protease [Gossypium hirsutum]
          Length = 389

 Score =  211 bits (537), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 135/344 (39%), Positives = 193/344 (56%), Gaps = 47/344 (13%)

Query: 40  EQSEDHLLNAEHHFSLF---KSKFSKTYATQEEHDYRFRVFKANL-----RRAKRRQLLD 91
           E   D  L+ E    +F   K K  K Y   EE + RF  FK NL     R AKR+    
Sbjct: 33  EHEIDAFLSEERVLEIFQQWKEKHRKVYRHAEEAEKRFENFKGNLKYILERNAKRKANKW 92

Query: 92  PTAVHGVTKFSDLTPSEFRRQFLG-----LNRRLRLPADAQKAPILPTNDLPTDFDWRDH 146
              V G+ KF+D++  EFR+ +L      +N+ + L  + ++   + + D P+  DWR++
Sbjct: 93  EHHV-GLNKFADMSNEEFRKAYLSKVKKPINKGITLSRNMRRK--VQSCDAPSSLDWRNY 149

Query: 147 GAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDS 206
           G VT VKDQG+CGSCW+FS+TGA+EG + L TG+L+SLSEQ+LV+CD         + + 
Sbjct: 150 GVVTAVKDQGSCGSCWAFSSTGAMEGINALVTGDLISLSEQELVECD---------TSNY 200

Query: 207 GCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDK--SKIAAAVSNFSVISSDED 264
           GC GG M+ AFE+++  GG++ E DYPYTG D G+C   K  +K+ +      V  SD  
Sbjct: 201 GCEGGYMDYAFEWVINNGGIDSESDYPYTGVD-GTCNTTKEETKVVSIDGYQDVEQSDSA 259

Query: 265 QMAANLVKHGPLAVGIN--AVWMQTYIGGV---SCPYICGKYLDHGVLIVGYGSSGFAPI 319
            + A  V   P++VGI+  A+  Q Y GG+   SC       +DH VLIVGYGS      
Sbjct: 260 LLCA--VAQQPVSVGIDGSAIDFQLYTGGIYDGSCSDDPDD-IDHAVLIVGYGSE----- 311

Query: 320 RFKEKPYWIIKNSWGENWGENGYYKIC----MGRNVCGVDSMVS 359
               + YWI+KNSWG +WG +GY+ +     +   VC V++M S
Sbjct: 312 --DSEEYWIVKNSWGTSWGIDGYFYLKRDTDLPYGVCAVNAMAS 353


>gi|18390634|ref|NP_563764.1| cysteine proteinase-like protein [Arabidopsis thaliana]
 gi|8844131|gb|AAF80223.1|AC025290_12 Contains similarity to a cysteine endopeptidase 1 from Phaseolus
           vulgaris gb|U52970 and is a member of the papain
           cysteine protease family PF|00112 [Arabidopsis thaliana]
 gi|332189848|gb|AEE27969.1| cysteine proteinase-like protein [Arabidopsis thaliana]
          Length = 343

 Score =  211 bits (537), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 124/319 (38%), Positives = 174/319 (54%), Gaps = 28/319 (8%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEF 109
           +  F  +    SK Y  ++E   RF ++++N++       L         +F+D+T SEF
Sbjct: 40  KQRFEKWLKTHSKLYGGRDEWMLRFGIYQSNVQLIDYINSLHLPFKLTDNRFADMTNSEF 99

Query: 110 RRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGA 169
           +  FLGLN         Q+    P  ++P   DWR  GAVT +++QG CG CW+FSA  A
Sbjct: 100 KAHFLGLNTSSLRLHKKQRPVCDPAGNVPDAVDWRTQGAVTPIRNQGKCGGCWAFSAVAA 159

Query: 170 LEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVERE 229
           +EG + + TG LVSLSEQQL+DCD        G+ + GC+GGLM +AFE+I   GG+  E
Sbjct: 160 IEGINKIKTGNLVSLSEQQLIDCD-------VGTYNKGCSGGLMETAFEFIKTNGGLATE 212

Query: 230 KDYPYTGTDGGSCKFDKSK-IAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQ 286
            DYPYTG + G+C  +KSK     +  +  ++ +E  +     +  P++VGI+A     Q
Sbjct: 213 TDYPYTGIE-GTCDQEKSKNKVVTIQGYQKVAQNEASLQIAAAQQ-PVSVGIDAGGFIFQ 270

Query: 287 TYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKIC 346
            Y  GV   Y CG  L+HGV +VGYG  G       ++ YWI+KNSWG  WGE GY  I 
Sbjct: 271 LYSSGVFTNY-CGTNLNHGVTVVGYGVEG-------DQKYWIVKNSWGTGWGEEGY--IR 320

Query: 347 MGRNV------CGVDSMVS 359
           M R V      CG+  M S
Sbjct: 321 MERGVSEDTGKCGIAMMAS 339


>gi|383849553|ref|XP_003700409.1| PREDICTED: cathepsin L-like [Megachile rotundata]
          Length = 343

 Score =  211 bits (537), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 139/324 (42%), Positives = 179/324 (55%), Gaps = 39/324 (12%)

Query: 56  FKSKFSKTYATQEEHDYRFRVFKAN-LRRAKRR---QLLDPTAVHGVTKFSDLTPSEFRR 111
           FK +  K Y  + E   R +++  N L+ A+     +L   T    + K+ D+   EF+ 
Sbjct: 31  FKMEHKKCYKHEAEERLRMKIYMKNKLQIAQHNCDYELKKVTYRLKINKYGDMLNHEFKN 90

Query: 112 QFLGLNRRL-------RLPADAQKAPILPTN-DLPTDFDWRDHGAVTGVKDQGACGSCWS 163
              G NR +       RLP  A  A I P N +LP   DWR  GAVT VKDQG CGSCW+
Sbjct: 91  MLNGYNRTINHTLRNERLPVGA--AFIEPCNVELPKMVDWRKCGAVTEVKDQGHCGSCWA 148

Query: 164 FSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSC-DSGCNGGLMNSAFEYILK 222
           FSATG+LEG HF  TG LVSLSEQ L+DC        SGS  ++GCNGGLM+ AF YI  
Sbjct: 149 FSATGSLEGQHFRRTGVLVSLSEQNLIDC--------SGSYGNNGCNGGLMDQAFSYIKD 200

Query: 223 AGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVIS-SDEDQMAANLVKHGPLAVGIN 281
             G++ EK YPY G D   C++DK    A+   F  I   DE ++ A +   GP++V I+
Sbjct: 201 NKGLDTEKTYPYEGED-DKCRYDKRSSGASDVGFVDIPVGDEQKLKAAVATVGPVSVAID 259

Query: 282 AVW--MQTYIGGVSC-PYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWG 338
           A     Q Y  G+   P      LDHGVL+VGYG+        + + YWI+KNSWGE+WG
Sbjct: 260 ASHQSFQFYSDGIYFEPECSSTNLDHGVLVVGYGTDE------EGRDYWIVKNSWGESWG 313

Query: 339 ENGYYKICMGRNV---CGVDSMVS 359
           E GY K  M RN+   CG+ S  S
Sbjct: 314 EKGYIK--MARNIDNHCGIASSAS 335


>gi|449438381|ref|XP_004136967.1| PREDICTED: cysteine proteinase RD21a-like [Cucumis sativus]
          Length = 479

 Score =  211 bits (537), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 128/337 (37%), Positives = 181/337 (53%), Gaps = 25/337 (7%)

Query: 31  IRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLL 90
           I ++  SD  Q  D  + A +   L      K Y    E + RF +FK NLR        
Sbjct: 42  IPEIPHSDAHQRPDEEVAALYESWLVH--HGKAYNAIGEKERRFEIFKDNLRFIDEHNRE 99

Query: 91  DPTAVHGVTKFSDLTPSEFRRQFLG--LNRRLRL-PADAQKAPILPTNDLPTDFDWRDHG 147
             T   G+T+F+DLT  E+R +FLG   +R+ RL  A + +      +DLP D DWR  G
Sbjct: 100 SRTYKVGLTRFADLTNEEYRARFLGGRFSRKPRLSAAKSGRYAAALGDDLPDDVDWRKKG 159

Query: 148 AVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSG 207
           AV  VKDQG CGSCW+FS+  A+EG + + TGEL+ LSEQ+LVDCD         S + G
Sbjct: 160 AVATVKDQGQCGSCWAFSSVAAVEGINQIVTGELIPLSEQELVDCDK--------SFNMG 211

Query: 208 CNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMA 267
           CNGGLM+ AF++I+  GG++ E+DYPY G D       K+     +  +  +  +++   
Sbjct: 212 CNGGLMDYAFQFIIGNGGIDTEEDYPYKGRDAACDPNRKNAKVVTIDGYEDVPENDESSL 271

Query: 268 ANLVKHGPLAVGINA--VWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKP 325
              V + P++V I A     Q Y  GV     CG  LDHGV+ VGYG+            
Sbjct: 272 KKAVANQPVSVAIEAGGRAFQLYQSGVFTGR-CGTDLDHGVVAVGYGTD-------NGTD 323

Query: 326 YWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVA 362
           YWI++NSWG++WGE+GY +  + RNV  + +    +A
Sbjct: 324 YWIVRNSWGKDWGESGYIR--LERNVANITTGKCGIA 358


>gi|224136808|ref|XP_002326950.1| predicted protein [Populus trichocarpa]
 gi|222835265|gb|EEE73700.1| predicted protein [Populus trichocarpa]
          Length = 456

 Score =  211 bits (537), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 128/346 (36%), Positives = 182/346 (52%), Gaps = 24/346 (6%)

Query: 10  LLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEE 69
           +L+LL  V A + A +       Q   +      D  + A +   L K    K Y    E
Sbjct: 1   MLMLLFLVFALSSAFDMSIISYHQTHATKSSWRTDDEVMAMYEEWLVKH--GKNYNALGE 58

Query: 70  HDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLN--RRLRLPADAQ 127
            + RF +FK NL    +    + T   G+ +F+DLT  EFR  +LG     + RLP  + 
Sbjct: 59  KEKRFEIFKDNLMFIDQHNSENRTYTVGLNRFADLTNEEFRSMYLGTRTGHKKRLPKTSD 118

Query: 128 KAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQ 187
           +      + LP   DWR  GAV  VKDQG CGSCW+FS   A+EG + + TG+L++LSEQ
Sbjct: 119 RYAPRVGDSLPDSVDWRKEGAVAEVKDQGGCGSCWAFSTIAAVEGINKIVTGDLIALSEQ 178

Query: 188 QLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKS 247
           +LVDCD         S + GCNGGLM+ AFE+I+  GG++ E DYPY G DG    + K+
Sbjct: 179 ELVDCDT--------SYNEGCNGGLMDYAFEFIINNGGIDTEDDYPYLGRDGRCDTYRKN 230

Query: 248 KIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKYLDHG 305
               ++ ++  +  +++      V + P++V I       Q Y  GV     CG  LDHG
Sbjct: 231 AKVVSIDSYEDVPENDETALKKAVANQPVSVAIEGGGRNFQLYNSGVFTGE-CGTSLDHG 289

Query: 306 VLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNV 351
           V  VGYG+        K K YWI++NSWG++WGE+GY +  M RN+
Sbjct: 290 VAAVGYGTE-------KGKDYWIVRNSWGKSWGESGYIR--MERNI 326


>gi|350538043|ref|NP_001234324.1| cysteine protease TDI-65 precursor [Solanum lycopersicum]
 gi|5726641|gb|AAD48496.1|AF172856_1 cysteine protease TDI-65 [Solanum lycopersicum]
 gi|2828252|emb|CAA05894.1| CYP1 [Solanum lycopersicum]
          Length = 466

 Score =  211 bits (537), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 127/354 (35%), Positives = 197/354 (55%), Gaps = 38/354 (10%)

Query: 8   SLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKS---KFSKTY 64
           S+LL+L+ S L+SA     D ++I        +++  H    +   +L++S   +  K+Y
Sbjct: 11  SILLMLIFSTLSSA----SDMSIISY------DETHIHRRTDDEVSALYESWLIEHGKSY 60

Query: 65  ATQEEHDYRFRVFKANLRRA-KRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNR---RL 120
               E D RF++FK NLR   ++  + + +   G+TKF+DLT  E+R  +LG      R 
Sbjct: 61  NALGEKDKRFQIFKDNLRYIDEQNSVPNQSYKLGLTKFADLTNEEYRSIYLGTKSSGDRK 120

Query: 121 RLPADAQKAPILPTND-LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTG 179
           +L  +     +    D LP   DWR+ G + GVKDQG+CGSCW+FSA  A+E  + + TG
Sbjct: 121 KLSKNKSDRYLPKVGDSLPESIDWREKGVLVGVKDQGSCGSCWAFSAVAAMESINAIVTG 180

Query: 180 ELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDG 239
            L+SLSEQ+LVDCD         S + GC+GGLM+ AFE+++K GG++ E+DYPY   +G
Sbjct: 181 NLISLSEQELVDCDR--------SYNEGCDGGLMDYAFEFVIKNGGIDTEEDYPYKERNG 232

Query: 240 GSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYI 297
              ++ K+     + ++  +  + ++     V H P+++ + A     Q Y  G+     
Sbjct: 233 VCDQYRKNAKVVKIDSYEDVPVNNEKALQKAVAHQPVSIALEAGGRDFQHYKSGIFTGK- 291

Query: 298 CGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNV 351
           CG  +DHGV+I GYG+            YWI++NSWG NWGENGY ++   RNV
Sbjct: 292 CGTAVDHGVVIAGYGTE-------NGMDYWIVRNSWGANWGENGYLRV--QRNV 336


>gi|237643659|ref|YP_002884349.1| V-CATH [Bombyx mandarina nucleopolyhedrovirus]
 gi|229358205|gb|ACQ57300.1| V-CATH [Bombyx mandarina nucleopolyhedrovirus]
          Length = 323

 Score =  211 bits (537), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 118/325 (36%), Positives = 181/325 (55%), Gaps = 29/325 (8%)

Query: 47  LNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTP 106
           L A ++F  F  +F+K Y+++ E   RF++F+ NL     +   D +A + + KFSDL+ 
Sbjct: 22  LKAPNYFEEFVHRFNKNYSSEVEKLRRFKIFQHNLNEIINKNQND-SAKYEINKFSDLSK 80

Query: 107 SEFRRQFLGLNRRLRLPADAQ---KAPIL--PTNDLPTDFDWRDHGAVTGVKDQGACGSC 161
            E   ++ GL+    LP   Q   K  IL  P    P +FDWR    VT VK+QG CG+C
Sbjct: 81  DETIAKYTGLS----LPTQTQNFCKVIILDQPPGKGPLEFDWRRLNKVTSVKNQGMCGAC 136

Query: 162 WSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYIL 221
           W+F+  G+LE    +   EL++LSEQQ++DCD           D+GCNGGL+++AFE I+
Sbjct: 137 WAFATLGSLESQFAIKHNELINLSEQQMIDCDF---------VDAGCNGGLLHTAFEAII 187

Query: 222 KAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVGI 280
           K GGV+ E DYPY   D  +C+ + +K    V + +  I   E+++   L   GP+ + I
Sbjct: 188 KMGGVQLESDYPYEA-DNNNCRMNSNKFLVQVKDCYRYIIVYEEKLKDLLRLVGPIPMAI 246

Query: 281 NAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGEN 340
           +A  +  Y  G+   Y     L+H VL+VGYG            PYW  KN+WG +WGE+
Sbjct: 247 DAADIVNYKQGI-IKYCFNSGLNHAVLLVGYGVEN-------NIPYWTFKNTWGTDWGED 298

Query: 341 GYYKICMGRNVCGVDSMVSSVAAIH 365
           G++++    N CG+ + ++S A I+
Sbjct: 299 GFFRVQQNINACGMRNELASTAVIY 323


>gi|332326583|gb|AEE42615.1| cysteine protease [Leishmania aethiopica]
          Length = 443

 Score =  211 bits (537), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 127/313 (40%), Positives = 166/313 (53%), Gaps = 34/313 (10%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           F  FK  + + Y T  E   R   F+ NL   +  Q  +P A  G+TKF DL+ +EF  +
Sbjct: 38  FEEFKRTYWRVYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 113 FLGLNRRLRLPADAQKA------PILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSA 166
           +L  N      A  Q A           + +P   DWR+ GAVT VKDQGACGSCW+FSA
Sbjct: 98  YL--NGAAYFAAAKQHAGQHHRKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAFSA 155

Query: 167 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK--AG 224
            G +E    ++   L  LSEQQLV CD +         DSGCNGGLM  AFE++L+   G
Sbjct: 156 VGNIESQWAVADHRLXXLSEQQLVSCDDK---------DSGCNGGLMTQAFEWLLRNMNG 206

Query: 225 GVEREKDYPYTGTDGG--SCKFDKSKIAAA-VSNFSVISSDEDQMAANLVKHGPLAVGIN 281
            +  E  YPY  + G    C      +  A +  +  I S E  MAA L K GP+++ ++
Sbjct: 207 TMLTEDSYPYVSSTGDVPECTNSSQLVPGARIDGYVTIESSETVMAAWLAKSGPISIAVD 266

Query: 282 AVWMQTYIGGV--SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGE 339
           A    +Y  GV  SC    G  L+HGVL+VGY  +G       E PYW+IKNSWGE+WGE
Sbjct: 267 ASSFMSYESGVLTSC---AGDALNHGVLLVGYNRTG-------EVPYWVIKNSWGEDWGE 316

Query: 340 NGYYKICMGRNVC 352
            GY ++ MG N C
Sbjct: 317 KGYVRVTMGVNAC 329


>gi|50355611|dbj|BAD29954.1| cysteine protease [Daucus carota]
          Length = 474

 Score =  211 bits (536), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 137/359 (38%), Positives = 192/359 (53%), Gaps = 39/359 (10%)

Query: 4   LILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKS---KF 60
           L  S    L+LSS    ++   D+   +     S   ++ D LL      SL++S   K 
Sbjct: 18  LFFSLASFLMLSSASDMSIITYDETHGLN----SPPLRTHDQLL------SLYESWLVKH 67

Query: 61  SKTYATQEEHDYRFRVFKANLRRAKRRQ-LLDPTAVHGVTKFSDLTPSEFRRQFLG--LN 117
            K Y    E + RF +FK N+    R   + + +   G+ KF+DLT  E+R  +L   + 
Sbjct: 68  HKNYNALGEKETRFGIFKDNVGFVDRHNSMRNQSYKLGLNKFADLTNDEYRSLYLSGKMM 127

Query: 118 RRLRLPADAQKAPILPTND---LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAH 174
           +R R   D  ++      D   LP   DWRD GAV  VKDQG CGSCW+FS  GA+EG +
Sbjct: 128 KRERKNEDGFRSDRFVFEDGDHLPESVDWRDRGAVAPVKDQGQCGSCWAFSTVGAVEGIN 187

Query: 175 FLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPY 234
            + TGEL+SLSEQ+LVDCD+          + GCNGGLM+ AFE+I+K GG++ E DYPY
Sbjct: 188 KIVTGELISLSEQELVDCDN--------GYNQGCNGGLMDYAFEFIVKNGGIDTEDDYPY 239

Query: 235 TGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGV 292
            G DG   +  K+     ++ +  +  ++++     V H P++V I A     Q Y  GV
Sbjct: 240 KGVDGLCDQNRKNAKVVTINGYEDVPHNDEKSLKKAVAHQPVSVAIEAGGRAFQLYESGV 299

Query: 293 SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNV 351
                CG  LDHGV+ VGYGS          K YWI++NSWG +WGE+GY +  + RNV
Sbjct: 300 FTGQ-CGTELDHGVVAVGYGSE-------NGKDYWIVRNSWGPDWGESGYIR--LERNV 348


>gi|390337645|ref|XP_001199228.2| PREDICTED: cathepsin L-like [Strongylocentrotus purpuratus]
          Length = 333

 Score =  211 bits (536), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 131/318 (41%), Positives = 175/318 (55%), Gaps = 33/318 (10%)

Query: 56  FKSKFSKTYATQEEHDYRFRVFKANL----RRAKRRQLLDPTAVHGVTKFSDLTPSEFRR 111
           +K++  K Y + EE   R  +++ NL    R   +  L   T   G+ +F+DL   EF  
Sbjct: 31  WKNEHGKRYLSDEEEASRRLIWQKNLDIVIRHNLKYDLGHFTYDLGMNQFADLQNKEFVA 90

Query: 112 QFLGLNRRLRLPADAQKAPILPTND---LPTDFDWRDHGAVTGVKDQGACGSCWSFSATG 168
              G  R       A+ +  LP N+   LP   DWR  G VT VKDQG CGSCW+FSATG
Sbjct: 91  MMTGF-RVNGTSKAAKGSTFLPPNNVGKLPKTVDWRTKGYVTPVKDQGQCGSCWAFSATG 149

Query: 169 ALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVER 228
           +LEG HF  TG+LVSLSEQ LVDC  +         + GCNGGLM+ AF+YI+ AGG++ 
Sbjct: 150 SLEGQHFKKTGKLVSLSEQNLVDCSDK---------NYGCNGGLMDRAFQYIIDAGGIDT 200

Query: 229 EKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKH-GPLAVGINA--VWM 285
           E+ YPY   D G+C F  + + A V+ ++ ++S  ++     V H GP++V I+A     
Sbjct: 201 EESYPYIAMD-GNCHFKTANVGATVTGYTDVTSGSEKALQKAVAHIGPISVAIDASHFSF 259

Query: 286 QTYIGGV-SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYK 344
           Q Y  GV + P      LDHGVL VGYG++           YWI+KNSW E WG NGY  
Sbjct: 260 QLYQSGVYNEPGCSSTLLDHGVLAVGYGTT------IDGTDYWIVKNSWAETWGMNGY-- 311

Query: 345 ICMGR---NVCGVDSMVS 359
           I M R   N CG+ +  S
Sbjct: 312 IWMSRNKDNQCGIATQAS 329


>gi|346469447|gb|AEO34568.1| hypothetical protein [Amblyomma maculatum]
          Length = 333

 Score =  211 bits (536), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 136/344 (39%), Positives = 178/344 (51%), Gaps = 32/344 (9%)

Query: 29  AMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKAN-LRRAKRR 87
           A++  +V +    +   +L  E  +  FKS   KTY +  E   RF++F  N L  AK  
Sbjct: 5   ALLCAIVAAATAATSQEILRTE--WEAFKSTHKKTYKSNVEELLRFKIFTENSLFIAKHN 62

Query: 88  QLLDPTAVH---GVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTND--LPTDFD 142
                  V    G+ +F+DL P EF +   G   +      +   P    ND  LP   D
Sbjct: 63  VKYAKGLVSYKLGINQFADLLPHEFVKMMNGYQGKRLAGRGSTYLPPANLNDSSLPKTVD 122

Query: 143 WRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESG 202
           WR  GAVT VKDQG CGSCW+FS+TG+LEG HFL TG+LVSLSEQ LVDC        S 
Sbjct: 123 WRKKGAVTPVKDQGQCGSCWAFSSTGSLEGQHFLKTGKLVSLSEQNLVDC-------SSA 175

Query: 203 SCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISS 261
             + GCNGGLM+++F YI   GG++ E  YPY   D G C++ K  + A  + F  +   
Sbjct: 176 YGNQGCNGGLMDNSFNYIKANGGIDTEDSYPYEAED-GDCRYKKEDVGATDTGFVDIKEG 234

Query: 262 DEDQMAANLVKHGPLAVGINAVW--MQTYIGGV-SCPYICGKYLDHGVLIVGYGSSGFAP 318
            E  +   +   GP++V I+A     Q Y  GV   P    + LDHGVL VGYG      
Sbjct: 235 SEKDLQKAVATVGPVSVAIDASQQSFQLYSEGVYDEPNCSSESLDHGVLAVGYGVK---- 290

Query: 319 IRFKEKPYWIIKNSWGENWGENGYYKICMGR---NVCGVDSMVS 359
                K YW++KNSW E WG++GY  I M R   N CG+ S  S
Sbjct: 291 ---NGKKYWLVKNSWAETWGQDGY--ILMSRDKNNQCGIASSAS 329


>gi|297845064|ref|XP_002890413.1| hypothetical protein ARALYDRAFT_472321 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297336255|gb|EFH66672.1| hypothetical protein ARALYDRAFT_472321 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 357

 Score =  211 bits (536), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 139/362 (38%), Positives = 196/362 (54%), Gaps = 37/362 (10%)

Query: 11  LLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEH 70
           L L ++ L+ +VA + D +++    P D E S D L+     F  + S F K Y T EE 
Sbjct: 14  LALSAATLSLSVAASHDYSIV-GYSPEDLE-SHDKLIEL---FENWISNFEKAYETVEEK 68

Query: 71  DYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAP 130
             RF VFK NL+          +   G+ +F+DL+  EF++ +LGL   +    + +   
Sbjct: 69  LLRFEVFKDNLKHIDETNKKVKSYWLGLNEFADLSHEEFKKMYLGLKTDIVRRDEERSYA 128

Query: 131 ILPTNDL---PTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQ 187
                D+   P   DWR  GAV  VK+QG+CGSCW+FS   A+EG + + TG L +LSEQ
Sbjct: 129 EFAYRDVEAVPKSVDWRKKGAVAEVKNQGSCGSCWAFSTVAAVEGINKIVTGNLTTLSEQ 188

Query: 188 QLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKF--D 245
           +L+DCD         + ++GCNGGLM+ AFEYI+K GG+ +E+DYPY+  + G+C+   D
Sbjct: 189 ELIDCDT--------TYNNGCNGGLMDYAFEYIVKNGGLRKEEDYPYS-MEEGTCEMQKD 239

Query: 246 KSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAV--WMQTYIGGVSCPYICGKYLD 303
           +S+      +  V ++DE  +   L  H PL+V I+A     Q Y G       CG  LD
Sbjct: 240 ESETVTIDGHQDVPTNDEKSLLKALA-HQPLSVAIDASGREFQFYSGVSVFDGRCGVDLD 298

Query: 304 HGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRN------VCGVDSM 357
           HGV  VGYGSS       K   Y I+KNSWG  WGE GY  I + RN      +CG++ M
Sbjct: 299 HGVAAVGYGSS-------KGSDYIIVKNSWGPKWGEKGY--IRLKRNTGKPEGLCGINKM 349

Query: 358 VS 359
            S
Sbjct: 350 AS 351


>gi|332326591|gb|AEE42619.1| cysteine protease [Leishmania aethiopica]
          Length = 443

 Score =  211 bits (536), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 127/313 (40%), Positives = 168/313 (53%), Gaps = 34/313 (10%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           F  FK  + + Y T  E   R   F+ NL   +  Q  +P A  G+TKF DL+ +EF  +
Sbjct: 38  FEEFKRTYWRAYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 113 FLGLNRRLRLPADAQKA------PILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSA 166
           +L  N      A  Q A           + +P   DWR+ GAVT VKBQGACGSCW+FSA
Sbjct: 98  YL--NGAAYFAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKBQGACGSCWAFSA 155

Query: 167 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK--AG 224
            G +E    ++   LV LSEQQLV CD +         DSGC GGLM  AFE++L+   G
Sbjct: 156 VGNIESQWAVAXHGLVRLSEQQLVSCDDK---------DSGCGGGLMTQAFEWLLRNMNG 206

Query: 225 GVEREKDYPYTGTDG--GSCKFDKSKIAAA-VSNFSVISSDEDQMAANLVKHGPLAVGIN 281
            +  E  YPY  + G    C      +  A +  + +I S E  MAA L K GP+++ ++
Sbjct: 207 TMFTEDSYPYVSSTGDVPECTNSSELVPGARIDGYVMIESXETVMAAWLAKSGPISIAVD 266

Query: 282 AVWMQTYIGGV--SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGE 339
           A    +Y  GV  SC    GK L+HGVL+VGY  +G       E PYW+IKNSWGE+WGE
Sbjct: 267 ASPFMSYESGVLTSC---VGKXLNHGVLLVGYNMTG-------EVPYWVIKNSWGEDWGE 316

Query: 340 NGYYKICMGRNVC 352
            GY ++ MG N C
Sbjct: 317 KGYVRVTMGVNAC 329


>gi|115743|sp|P07154.2|CATL1_RAT RecName: Full=Cathepsin L1; AltName: Full=Cyclic protein 2;
           Short=CP-2; AltName: Full=Major excreted protein;
           Short=MEP; Contains: RecName: Full=Procathepsin L;
           Contains: RecName: Full=Cathepsin L1 heavy chain;
           Contains: RecName: Full=Cathepsin L1 light chain; Flags:
           Precursor
 gi|38648869|gb|AAH63175.1| Cathepsin L1 [Rattus norvegicus]
 gi|149029152|gb|EDL84437.1| cathepsin L, isoform CRA_a [Rattus norvegicus]
 gi|386267881|dbj|BAM14518.1| cathepsin L [Rattus norvegicus]
          Length = 334

 Score =  211 bits (536), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 128/324 (39%), Positives = 176/324 (54%), Gaps = 24/324 (7%)

Query: 44  DHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVT---- 99
           D   NA+ H   +KS   + Y T EE ++R  V++ N+R  +          HG T    
Sbjct: 22  DQTFNAQWH--QWKSTHRRLYGTNEE-EWRRAVWEKNMRMIQLHNGEYSNGKHGFTMEMN 78

Query: 100 KFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACG 159
            F D+T  EFR+   G   +        + P++    +P   DWR+ G VT VK+QG CG
Sbjct: 79  AFGDMTNEEFRQIVNGYRHQKHKKGRLFQEPLML--QIPKTVDWREKGCVTPVKNQGQCG 136

Query: 160 SCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEY 219
           SCW+FSA+G LEG  FL TG+L+SLSEQ LVDC H+         + GCNGGLM+ AF+Y
Sbjct: 137 SCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHD-------QGNQGCNGGLMDFAFQY 189

Query: 220 ILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVG 279
           I + GG++ E+ YPY   D GSCK+      A  + F  I   E  +   +   GP++V 
Sbjct: 190 IKENGGLDSEESYPYEAKD-GSCKYRAEYAVANDTGFVDIPQQEKALMKAVATVGPISVA 248

Query: 280 INAVW--MQTYIGGVSC-PYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGEN 336
           ++A    +Q Y  G+   P    K LDHGVL+VGYG  G    + K   YW++KNSWG+ 
Sbjct: 249 MDASHPSLQFYSSGIYYEPNCSSKDLDHGVLVVGYGYEGTDSNKDK---YWLVKNSWGKE 305

Query: 337 WGENGYYKICMGRNV-CGVDSMVS 359
           WG +GY KI   RN  CG+ +  S
Sbjct: 306 WGMDGYIKIAKDRNNHCGLATAAS 329


>gi|449673497|ref|XP_002169904.2| PREDICTED: cathepsin L-like [Hydra magnipapillata]
          Length = 325

 Score =  211 bits (536), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 127/317 (40%), Positives = 170/317 (53%), Gaps = 26/317 (8%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEF 109
           E  + ++K   +K Y+ + E + R+ ++K N+ R           +  +  F D+T +EF
Sbjct: 24  ESSWYVWKMAHNKAYSHESEENVRYAIWKDNMNRITEYNSKSKNVILRMNHFGDMTNTEF 83

Query: 110 RRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGA 169
           R +  GL   L    +     +      P   DWR  G VT VK+QG CGSCW+FS+TGA
Sbjct: 84  RAKMNGL--LLHKHQNGSTFLVPSHTAAPDAVDWRSEGYVTPVKNQGQCGSCWAFSSTGA 141

Query: 170 LEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVERE 229
           LEG HF  TG LVSLSEQ LVDC  +         ++GCNGGLM++AF YI   GG++ E
Sbjct: 142 LEGQHFKKTGRLVSLSEQNLVDCSTDYG-------NNGCNGGLMDNAFSYIKANGGIDTE 194

Query: 230 KDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVGINAVWM--Q 286
             YPY G D G+C++ KS I A  + F  +   DED +   +   GP++V I+A  M  Q
Sbjct: 195 TGYPYEGQD-GTCRYSKSSIGADDTGFVDIPEGDEDALKQAVATVGPVSVAIDASHMSFQ 253

Query: 287 TYIGGV-SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKI 345
            Y  GV   P      LDHGVL+VGYG+          K YW++KNSWG  WG  GY  I
Sbjct: 254 FYHSGVYDEPQCSPSALDHGVLVVGYGTD-------NGKDYWLVKNSWGTGWGTEGY--I 304

Query: 346 CMGR---NVCGVDSMVS 359
            M R   N CG+ S  S
Sbjct: 305 YMSRNNQNQCGIASKAS 321


>gi|111036374|dbj|BAF02516.1| cathepsin L-like proteinase [Echinococcus multilocularis]
          Length = 338

 Score =  211 bits (536), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 135/319 (42%), Positives = 175/319 (54%), Gaps = 32/319 (10%)

Query: 56  FKSKFSKTYATQEEHDYRFRVFKAN---LRRAKRRQLLD-PTAVHGVTKFSDLTPSEFRR 111
           +K   +KTYAT  E   R R+F  N   +R    R  L   T    +  F+DLT  EF  
Sbjct: 33  WKVANNKTYATLREEHLRMRIFINNYLFVRWHNERYYLGLETYSTALNAFADLTLEEFAE 92

Query: 112 QFLGLNRRLR--LPADAQKAPI-LPTNDL-PTDFDWRDHGAVTGVKDQGACGSCWSFSAT 167
           ++L L +     +  D     +  PT  L P   DWR  G VT +KDQG CGSCW+FSAT
Sbjct: 93  KYLTLKQTPMEGIWQDMSTQYVERPTRMLVPDSIDWRKKGLVTPIKDQGDCGSCWAFSAT 152

Query: 168 GALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVE 227
           GALEG     TG+L+SLSEQQLVDC        + + + GCNGG MN AF Y ++  G E
Sbjct: 153 GALEGQLKRKTGKLISLSEQQLVDC-------STYTGNEGCNGGDMNDAFRYWMR-NGAE 204

Query: 228 REKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVGINAV--W 284
            E DYPYT  D G CKF+ SK+   VS F  V    EDQ+  ++ + GP++V I+A    
Sbjct: 205 SESDYPYTAMD-GKCKFNSSKVVTKVSKFVKVPKKREDQLKLSVAQVGPVSVAIDATSSG 263

Query: 285 MQTYIGGVSCPYICG-KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYY 343
              Y  G+     C  +YLDH VL+VGY +          + YWI+KNSWGE+WG+ GY 
Sbjct: 264 FMLYKKGIYQDNTCSQQYLDHAVLVVGYDADK------TRQKYWIVKNSWGEDWGQRGY- 316

Query: 344 KICMGR---NVCGVDSMVS 359
            I M R   N+CG+ +M S
Sbjct: 317 -IWMARDKGNMCGIATMAS 334


>gi|2351557|gb|AAB68595.1| cathepsin [Choristoneura fumiferana MNPV]
          Length = 324

 Score =  211 bits (536), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 114/326 (34%), Positives = 180/326 (55%), Gaps = 28/326 (8%)

Query: 46  LLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLT 105
           LL A  +F  F   F+K Y+++ E  +RF++F+ NL     + L D +A + + KFSDL+
Sbjct: 21  LLKAPSYFEDFLHNFNKNYSSKSEKLHRFKIFQHNLEEIINKNLNDTSAQYEINKFSDLS 80

Query: 106 PSEFRRQFLGLNRRLRLPADAQ---KAPIL--PTNDLPTDFDWRDHGAVTGVKDQGACGS 160
             E   ++ GL+    LP   Q   +  +L  P +  P +FDWR    VT VK+QG CG+
Sbjct: 81  KDETISKYTGLS----LPLQNQNFCEVVVLNRPPDKGPLEFDWRRLNKVTSVKNQGTCGA 136

Query: 161 CWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYI 220
           CW+F+  G+LE    +   +L++LSEQQL+DCD           D GC+GGL+++A+E +
Sbjct: 137 CWAFATLGSLESQFAIKHDQLINLSEQQLIDCDF---------VDMGCDGGLLHTAYEAV 187

Query: 221 LKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVG 279
           +  GG++ E DYPY   + G C+ + +K    V   +  I+  E+++   L   GP+ V 
Sbjct: 188 MNMGGIQAENDYPYEANN-GDCRANAAKFVVKVKKCYRYITVFEEKLKDLLRSVGPIPVA 246

Query: 280 INAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGE 339
           I+A  +  Y  G+   Y     L+H VL+VGY             P+WI+KN+WG +WGE
Sbjct: 247 IDASDIVNYKRGI-MKYCANHGLNHAVLLVGYAVQNGV-------PFWILKNTWGADWGE 298

Query: 340 NGYYKICMGRNVCGVDSMVSSVAAIH 365
            GY+++    N CG+ + + S A I+
Sbjct: 299 QGYFRVQQNINACGIQNELPSSAEIY 324


>gi|402770507|gb|AFQ98388.1| cathepsin L [Rhipicephalus microplus]
          Length = 332

 Score =  210 bits (535), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 135/321 (42%), Positives = 168/321 (52%), Gaps = 31/321 (9%)

Query: 52  HFSLFKSKFSKTYATQEEHDYRFRVFKAN-LRRAKRRQLLDPTAVH---GVTKFSDLTPS 107
            +  FK+   KTY +  E   RF++F  N L  AK         V    G+ +F DL   
Sbjct: 26  QWEAFKTTHKKTYQSHMEELLRFKIFTENSLIIAKHNAKYAKGLVSYKLGMNQFGDLLAH 85

Query: 108 EFRRQFLGLNRRLRLPADAQKAPILPTND--LPTDFDWRDHGAVTGVKDQGACGSCWSFS 165
           EF R F G +   R    +   P    ND  LP   DWR  GAVT VKDQG CGSCW+FS
Sbjct: 86  EFARIFNGYHGS-RKSGGSTFLPPANVNDSSLPKAVDWRKKGAVTPVKDQGQCGSCWAFS 144

Query: 166 ATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGG 225
            TG+LEG HFL  GELVSLSEQ LVDC            ++GC GGLM  AF+YI    G
Sbjct: 145 TTGSLEGQHFLKNGELVSLSEQNLVDCSQSFG-------NNGCEGGLMEDAFKYIKANDG 197

Query: 226 VEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSD-EDQMAANLVKHGPLAVGINAVW 284
           ++ EK YPY   D G C+F K  + A  + +  I +  ED +   +   GP++V I+A  
Sbjct: 198 IDTEKSYPYEAVD-GECRFKKEDVGATDTGYVEIKAGCEDDLKKAVATVGPISVAIDASH 256

Query: 285 --MQTYIGGV-SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENG 341
              Q Y  GV   P    + LDHGVL+VGYG  G        K YW++KNSW E+WG+ G
Sbjct: 257 SSFQLYSEGVYDEPECSSEDLDHGVLVVGYGVKG-------GKKYWLVKNSWAESWGDQG 309

Query: 342 YYKICMGR---NVCGVDSMVS 359
           Y  I M R   N CG+ S  S
Sbjct: 310 Y--ILMSRDNNNQCGIASQAS 328


>gi|6978723|ref|NP_037288.1| cathepsin L1 preproprotein [Rattus norvegicus]
 gi|55888|emb|CAA68691.1| prepro-cathepsin L [Rattus norvegicus]
          Length = 334

 Score =  210 bits (535), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 128/324 (39%), Positives = 176/324 (54%), Gaps = 24/324 (7%)

Query: 44  DHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVT---- 99
           D   NA+ H   +KS   + Y T EE ++R  V++ N+R  +          HG T    
Sbjct: 22  DQTFNAQWH--QWKSTHRRLYGTNEE-EWRRAVWEKNMRMIQLHNGEYSNGKHGFTMEMN 78

Query: 100 KFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACG 159
            F D+T  EFR+   G   +        + P++    +P   DWR+ G VT VK+QG CG
Sbjct: 79  AFGDMTNEEFRQIVNGYRHQKHKKGRLFQEPLML--QIPKTVDWREKGCVTPVKNQGQCG 136

Query: 160 SCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEY 219
           SCW+FSA+G LEG  FL TG+L+SLSEQ LVDC H+         + GCNGGLM+ AF+Y
Sbjct: 137 SCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHD-------QGNQGCNGGLMDFAFQY 189

Query: 220 ILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVG 279
           I + GG++ E+ YPY   D GSCK+      A  + F  I   E  +   +   GP++V 
Sbjct: 190 IKENGGLDSEESYPYEAKD-GSCKYRAEYAVANDTGFVDIPQQEKALMKPVATVGPISVA 248

Query: 280 INAVW--MQTYIGGVSC-PYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGEN 336
           ++A    +Q Y  G+   P    K LDHGVL+VGYG  G    + K   YW++KNSWG+ 
Sbjct: 249 MDASHPSLQFYSSGIYYEPNCSSKDLDHGVLVVGYGYEGTDSNKDK---YWLVKNSWGKE 305

Query: 337 WGENGYYKICMGRNV-CGVDSMVS 359
           WG +GY KI   RN  CG+ +  S
Sbjct: 306 WGMDGYIKIAKDRNNHCGLATAAS 329


>gi|46309423|ref|YP_006313.1| ORF31 [Agrotis segetum granulovirus]
 gi|46200640|gb|AAS82707.1| ORF31 [Agrotis segetum granulovirus]
          Length = 327

 Score =  210 bits (535), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 116/328 (35%), Positives = 178/328 (54%), Gaps = 30/328 (9%)

Query: 45  HLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDL 104
           +L ++E  F  F  K++K+Y+++EE   +F  FK N+R    +  L  +AV+ +  +SD+
Sbjct: 17  NLNDSEKLFEDFVQKYNKSYSSEEERQIKFDNFKNNIRSINEKNSLSNSAVYDINFYSDM 76

Query: 105 TPSEFRRQFLGLNRRLR---------LPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQ 155
             +E  R+  G    L+         +  + +     P   LP  FDWRD   +T VK+Q
Sbjct: 77  NKNELLRKQTGFKINLKKNNLDLSWNIKCNKKLINGNPAVLLPDSFDWRDRHVITSVKNQ 136

Query: 156 GACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNS 215
             CGSCW+FS    +E  + +   +L+ LSEQQLV+CD +         ++GCNGGLM+ 
Sbjct: 137 RDCGSCWAFSTIANIESLYAIKYNKLLDLSEQQLVNCDEQ---------NNGCNGGLMHW 187

Query: 216 AFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGP 275
           A E I++ GGV  E D+PYT +D G CK  +  +     N   I S+ED++   L+ +GP
Sbjct: 188 AMEEIIRQGGVSNETDFPYTASD-GFCKRKQGFVNINGCN-QFILSNEDRLRELLIFNGP 245

Query: 276 LAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGE 335
           +++ I+ + +  Y  G+S        L+H VL+VGYG            PYWI+KNSWG 
Sbjct: 246 ISIAIDVIDVIDYSQGISSTCRNDNGLNHAVLLVGYGVKN-------NIPYWILKNSWGS 298

Query: 336 NWGENGYYKICMGRNVCGVDSMVSSVAA 363
            WGENGY+++    N CG   M++  AA
Sbjct: 299 QWGENGYFRVQRNINSCG---MINDYAA 323


>gi|260819200|ref|XP_002604925.1| hypothetical protein BRAFLDRAFT_77225 [Branchiostoma floridae]
 gi|229290254|gb|EEN60935.1| hypothetical protein BRAFLDRAFT_77225 [Branchiostoma floridae]
          Length = 520

 Score =  210 bits (535), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 127/345 (36%), Positives = 184/345 (53%), Gaps = 38/345 (11%)

Query: 51  HHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFR 110
           H  S +K + ++ Y T +E   RF  F+ NL + ++             +F+D++  EFR
Sbjct: 173 HFASQWKHEHNRRYKTADEEKARFATFQDNLLKIEKLNAEYSGTEFATNQFADMSEEEFR 232

Query: 111 RQFLGLNRRLRLPADAQKAPIL-PTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGA 169
            + L   R        +        NDLP  ++W DHGAVT +KDQG+ GSCW+FS    
Sbjct: 233 SKILMRPRPPPQHPRERYLRDYGEVNDLPEAYNWVDHGAVTPIKDQGSAGSCWAFSTIEN 292

Query: 170 LEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVERE 229
           LEG  FL+   L +LS +Q+VDCD   DP ++G+ D G  GG    AF+YI + GG+E+E
Sbjct: 293 LEGQWFLTKHPLTNLSVEQVVDCDDNTDP-KTGNADCGVFGGWPYLAFQYIKRVGGIEKE 351

Query: 230 KDYPYTGTDGG-----------------------------SCKF--DKSKIAAA--VSNF 256
           +DYPY    GG                             SC F  DKSK      V+++
Sbjct: 352 EDYPYCSGLGGEKGTCFPCPAPAYNTSMCGPAVSYCNETESCGFRLDKSKFIPGLQVTDW 411

Query: 257 SVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICG-KYLDHGVLIVGYGSSG 315
           + I ++E  +A  L+K GPL+V +NAV +Q Y  GV  P+ C  K LDH VL+ G+G   
Sbjct: 412 AAIDTNETTIAVQLMKIGPLSVALNAVLLQFYHRGVFEPHFCDPKSLDHAVLLTGWGVE- 470

Query: 316 FAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSS 360
              I  ++KPYWI+KNSWG+ WG +GY+ I  G   CG+++ V++
Sbjct: 471 -KTIFGEKKPYWIVKNSWGKKWGMDGYFYIKRGVGQCGINTQVAT 514



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/137 (35%), Positives = 67/137 (48%), Gaps = 34/137 (24%)

Query: 202 GSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGG--------------------- 240
           G+ D G  GG    AF+YI + GG+E+E+DYPY    GG                     
Sbjct: 20  GNADCGVFGGWPYLAFQYIKRVGGIEKEEDYPYCSGLGGEKGTCFPCPAPAYNASMCGPA 79

Query: 241 --------SCKF--DKSKIAAA--VSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTY 288
                   SC F  DKSK      V++++ I ++E  +A  L+K GPL+V +NAV +Q Y
Sbjct: 80  VSYCNETESCGFRLDKSKFIPGLQVTDWAAIDTNETTIAVQLMKIGPLSVALNAVLLQFY 139

Query: 289 IGGVSCPYICG-KYLDH 304
             GV  P+ C  K LDH
Sbjct: 140 HRGVFEPHFCDPKSLDH 156


>gi|9631045|ref|NP_047715.1| cathepsin-like proteinase [Lymantria dispar MNPV]
 gi|13124028|sp|Q9YMP9.1|CATV_NPVLD RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|3822313|gb|AAC70264.1| cathepsin-like proteinase [Lymantria dispar MNPV]
          Length = 356

 Score =  210 bits (535), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 120/329 (36%), Positives = 184/329 (55%), Gaps = 30/329 (9%)

Query: 45  HLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRR--AKRRQLLD-PTAVHGVTKF 101
           +L  A  +F  F   ++K Y +  E + R+ +FK NL    AK     D PTA + + KF
Sbjct: 48  NLQRAPDYFESFVENYNKNYTSDWEKNKRYSIFKDNLHEINAKNGNATDGPTATYKINKF 107

Query: 102 SDLTPSEFRRQFLGLNRRLRLPADAQKAPIL--PTNDLPTDFDWRDHGAVTGVKDQGACG 159
           SDL+ SE   +F GL+   R+ ++  K  IL  P +  P  FDWR+   VT +K+QGACG
Sbjct: 108 SDLSKSELIAKFTGLSIPERV-SNFCKTIILNQPPDKGPLHFDWREQNKVTSIKNQGACG 166

Query: 160 SCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEY 219
           +CW+F+   ++E    +    L+ LSEQQL+DCD         S D GCNGGL+++AFE 
Sbjct: 167 ACWAFATLASVESQFAMRHNRLIDLSEQQLIDCD---------SVDMGCNGGLLHTAFEE 217

Query: 220 ILKAGGVEREKDYPYTGTDGGSCKFDKSK--IAAAVSNFSVISSDEDQMAANLVKHGPLA 277
           I++ GGV+ E DYP+ G +   C  D+ +  + + V  +  +  +E+++   L   GP+ 
Sbjct: 218 IMRMGGVQTELDYPFVGRN-RRCGLDRHRPYVVSLVGCYRYVMVNEEKLKDLLRAVGPIP 276

Query: 278 VGINAVWMQTYIGGV--SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGE 335
           + I+A  +  Y  GV  SC       L+H VL+VGYG            PYW+ KN+WG+
Sbjct: 277 MAIDAADIVNYYRGVISSCE---NNGLNHAVLLVGYGVENGV-------PYWVFKNTWGD 326

Query: 336 NWGENGYYKICMGRNVCGVDSMVSSVAAI 364
           +WGENGY+++    N CG+ + ++S A +
Sbjct: 327 DWGENGYFRVRQNVNACGMVNDLASTAVL 355


>gi|18391078|ref|NP_563855.1| xylem bark cysteine peptidase 3 [Arabidopsis thaliana]
 gi|110741821|dbj|BAE98853.1| papain-like cysteine peptidase XBCP3 [Arabidopsis thaliana]
 gi|111074448|gb|ABH04597.1| At1g09850 [Arabidopsis thaliana]
 gi|332190386|gb|AEE28507.1| xylem bark cysteine peptidase 3 [Arabidopsis thaliana]
          Length = 437

 Score =  210 bits (535), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 131/325 (40%), Positives = 184/325 (56%), Gaps = 32/325 (9%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLL-DPTAVHGVTKFSDLTPSEFRR 111
           F  +  K  KTY ++EE   R ++FK N     +  L+ + T    +  F+DLT  EF+ 
Sbjct: 32  FDDWCQKHGKTYGSEEERQQRIQIFKDNHDFVTQHNLITNATYSLSLNAFADLTHHEFKA 91

Query: 112 QFLGLNRRLRLPADAQKAPILPTN-DLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGAL 170
             LGL+        A K   L  +  +P   DWR  GAVT VKDQG+CG+CWSFSATGA+
Sbjct: 92  SRLGLSVSAPSVIMASKGQSLGGSVKVPDSVDWRKKGAVTNVKDQGSCGACWSFSATGAM 151

Query: 171 EGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREK 230
           EG + + TG+L+SLSEQ+L+DCD         S ++GCNGGLM+ AFE+++K  G++ EK
Sbjct: 152 EGINQIVTGDLISLSEQELIDCDK--------SYNAGCNGGLMDYAFEFVIKNHGIDTEK 203

Query: 231 DYPYTGTDGGSCKFDKSK-IAAAVSNFSVISSDEDQMAANLVKHGPLAVGI--NAVWMQT 287
           DYPY   D G+CK DK K     + +++ + S++++     V   P++VGI  +    Q 
Sbjct: 204 DYPYQERD-GTCKKDKLKQKVVTIDSYAGVKSNDEKALMEAVAAQPVSVGICGSERAFQL 262

Query: 288 YIGGV-SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKIC 346
           Y  G+ S P  C   LDH VLIVGYGS            YWI+KNSWG++WG +G+    
Sbjct: 263 YSSGIFSGP--CSTSLDHAVLIVGYGSQNGV-------DYWIVKNSWGKSWGMDGFMH-- 311

Query: 347 MGRN------VCGVDSMVSSVAAIH 365
           M RN      VCG++ + S     H
Sbjct: 312 MQRNTENSDGVCGINMLASYPIKTH 336


>gi|388890776|gb|AFK80364.1| cysteine proteinase 3, partial [Acanthamoeba castellanii]
          Length = 329

 Score =  210 bits (535), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 124/305 (40%), Positives = 174/305 (57%), Gaps = 23/305 (7%)

Query: 61  SKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRL 120
           SK+Y + EE  +R+ V++ N +  +     + T+   + KF DLT +EF + F GL    
Sbjct: 38  SKSY-SNEEFVFRWNVWRENQQLIEEHNRSNKTSFLAMNKFGDLTNAEFNKLFKGLAFDY 96

Query: 121 RLPADAQKA-PILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTG 179
              A+   A   +P   L  DFDWR  GAVT VK+QG CGSCWSFS TG+ EGA+FL TG
Sbjct: 97  SFHANKAAAEKAVPAPGLSADFDWRQKGAVTHVKNQGQCGSCWSFSTTGSTEGANFLKTG 156

Query: 180 ELVSLSEQQLVDCDHECDPEESGSC-DSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTD 238
            L SLSEQ L+DC        SGS  ++GCNGGLM+ AFEYI+   G++ E  YPY  T 
Sbjct: 157 RLTSLSEQNLIDC--------SGSYGNNGCNGGLMDYAFEYIINNKGIDTEASYPYQ-TA 207

Query: 239 GGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPY 296
             +C+++ +    ++++++ +SS ++    N V   P +V I+A     Q Y GGV    
Sbjct: 208 QYTCQYNPANSGGSLTSYTDVSSGDENALLNAVATEPTSVAIDASHNSFQFYSGGVYYES 267

Query: 297 ICGK-YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGV 354
            C    LDHGVL VG+G+          + YW++KNSWG +WG  GY K+   R N CG+
Sbjct: 268 ACSSTQLDHGVLAVGWGTE-------DGQDYWLVKNSWGADWGLAGYIKMARNRSNNCGI 320

Query: 355 DSMVS 359
            +  S
Sbjct: 321 ATSAS 325


>gi|530734|emb|CAA56914.1| cathepsin l [Nephrops norvegicus]
 gi|1582620|prf||2119193A cathepsin L-related Cys protease
          Length = 324

 Score =  210 bits (535), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 133/322 (41%), Positives = 169/322 (52%), Gaps = 32/322 (9%)

Query: 46  LLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRA----KRRQLLDPTAVHGVTKF 101
           L  A   +  FK KF + Y   EE  YR  VF  NL+      K+ +  + T    + +F
Sbjct: 13  LAAANPSWEEFKGKFGRKYVDLEEERYRLNVFLDNLQYIEEFNKKYESGEVTYNLAINQF 72

Query: 102 SDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLP--TDFDWRDHGAVTGVKDQGACG 159
           SDLT  EF     G    LR P     A    T+  P  T+ DWR  G VT VKDQG CG
Sbjct: 73  SDLTNDEFNSMMKGYKTSLR-PKPV--AVFTSTDAAPETTEVDWRTKGCVTHVKDQGQCG 129

Query: 160 SCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSC--DSGCNGGLMNSAF 217
           SCW+FSATG+LEG HFL  GELVSL+EQQLVDC        +G    + GCNGG +N AF
Sbjct: 130 SCWAFSATGSLEGQHFLKYGELVSLAEQQLVDC--------AGGIYYNQGCNGGWVNQAF 181

Query: 218 EYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPL 276
           +YI   GG++ E  YPY   D  +C+F+ + +AA  S F S+    E          GP+
Sbjct: 182 KYIKANGGIDTESSYPYEARD-NTCRFNSNSVAATCSGFVSIAQGSESPEVRRTTNTGPI 240

Query: 277 AVGINAVW--MQTYIGGVSC-PYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSW 333
           +V I+A     Q+Y  GV   P      LDH VL VGYGS G        + +W++KNSW
Sbjct: 241 SVAIDAAHRSFQSYSSGVYYEPSCSSSQLDHAVLAVGYGSEG-------GQDFWLVKNSW 293

Query: 334 GENWGENGYYKICMGR-NVCGV 354
           G +WG  GY  +   R N CG+
Sbjct: 294 GTSWGSAGYINMARNRNNNCGI 315


>gi|351710879|gb|EHB13798.1| Cathepsin F [Heterocephalus glaber]
          Length = 482

 Score =  210 bits (535), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 131/313 (41%), Positives = 179/313 (57%), Gaps = 24/313 (7%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLD-PTAVHGVTKFSDLTPSEFRR 111
           F  F + +++TY +++E  +R  VF  N+  A+R Q LD  TA +GVTKFSDLT  EFR 
Sbjct: 185 FKNFVATYNRTYESKKEAQWRLSVFTRNMVLAQRIQALDHGTAQYGVTKFSDLTEEEFRT 244

Query: 112 QFLGLNRRLRL-PADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGAL 170
            +L  N  LR  P           +  P ++DWR  GAVT VK+QG CGSCW+FS TG +
Sbjct: 245 IYL--NPLLREEPGKKMHLAKAVRDPAPLEWDWRKKGAVTEVKNQGMCGSCWAFSVTGNV 302

Query: 171 EGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREK 230
           EG  FL+ G L+SLSEQ+L+DCD           D  C GG  ++A+  I   GG+E E 
Sbjct: 303 EGQWFLNRGTLLSLSEQELLDCD---------KMDKACMGGFPSNAYLAIKSLGGLETED 353

Query: 231 DYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIG 290
           DY Y G    +C F   K    +++   +S +E ++AA L   GP++V INA  MQ Y  
Sbjct: 354 DYSYQG-HMKACNFSAKKAKVYINDSVELSKNEQKLAAWLAVKGPISVAINAFGMQFYRH 412

Query: 291 GVSCPY--ICGK-YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICM 347
           G++ P   +C   ++DH +L+VGYG+           P+W IKNSWG +WGE GYY +  
Sbjct: 413 GIAHPLRPLCSPWFIDHAMLVVGYGNR-------SNVPFWAIKNSWGTDWGEEGYYYLHR 465

Query: 348 GRNVCGVDSMVSS 360
           G   CGV+ M SS
Sbjct: 466 GSGACGVNIMASS 478


>gi|394331820|gb|AFN27129.1| cysteine protease [Leishmania tropica]
          Length = 443

 Score =  210 bits (535), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 127/313 (40%), Positives = 167/313 (53%), Gaps = 34/313 (10%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           F  FK  + + Y T  E   R   F+ NL   +  Q  +P A  G+TKF DL+ +EF  +
Sbjct: 38  FEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 113 FLGLNRRLRLPADAQKA------PILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSA 166
           +L  N      A  Q A           + +P   DWR  GAVT VKDQGACGSCW+FSA
Sbjct: 98  YL--NGAAYFAAAKQHAGQHYRKARADLSAVPDAVDWRKKGAVTPVKDQGACGSCWAFSA 155

Query: 167 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK--AG 224
            G++E    L+   L +LSEQQLV CD +         D+GC GGLM  AFE++L+   G
Sbjct: 156 VGSIESQWALAGHRLTALSEQQLVSCDDK---------DNGCRGGLMLQAFEWLLRNMNG 206

Query: 225 GVEREKDYPYTGTDG--GSCKFDKSKIAAA-VSNFSVISSDEDQMAANLVKHGPLAVGIN 281
            +  E  YPY  + G    C      +  A +  +  I S E  MAA L K+GP+++ ++
Sbjct: 207 TMFTEDSYPYVSSTGYVPECSNSSQLVPGARIDGYMTIESSETVMAAWLAKNGPISIAVD 266

Query: 282 AVWMQTYIGGV--SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGE 339
           A    +Y  GV  SC    G  L+HGVL+V Y  +G       E PYW+IKNSWGENWGE
Sbjct: 267 ASSFMSYQSGVLTSC---AGMPLNHGVLLVWYNRTG-------EVPYWVIKNSWGENWGE 316

Query: 340 NGYYKICMGRNVC 352
           NGY ++ MG N C
Sbjct: 317 NGYVRVTMGVNAC 329


>gi|281203744|gb|EFA77940.1| hypothetical protein PPL_08585 [Polysphondylium pallidum PN500]
          Length = 505

 Score =  210 bits (535), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 123/332 (37%), Positives = 182/332 (54%), Gaps = 30/332 (9%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEF 109
           ++ F  +  +F K Y   E    RF +FK+N+         +   V G+   +DLT  E+
Sbjct: 178 KNEFENWIDRFEKKYDVSE-FKKRFSIFKSNMDFVHSWNSKNSQTVLGLNHLADLTNLEY 236

Query: 110 RRQFLGLNRR--LRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSAT 167
           R+ +LG +++  L  P + + + +          DWR  GAV+ +KDQG CGSCWSFS T
Sbjct: 237 RQFYLGTHKKAVLGTPGNHEVSNLQSVFGDSATVDWRQKGAVSPIKDQGQCGSCWSFSTT 296

Query: 168 GALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVE 227
           G++EGAH + +G +V LSEQ LVDC        +   + GCNGGLM+ AFEYI+   G++
Sbjct: 297 GSVEGAHQIKSGNMVELSEQNLVDC-------STSEGNMGCNGGLMDYAFEYIITNNGID 349

Query: 228 REKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKH-GPLAVGINAVW-- 284
            E  YPYT + G +CK++K+   A +S++  I++  +   A+ VK+ GP++V I+A    
Sbjct: 350 TESSYPYTASSGTTCKYNKANSGATISSYKNITAGSESDLADAVKNAGPVSVAIDASHNS 409

Query: 285 MQTYIGGVSCPYICGKY-LDHGVLIVGYGSS---------GFAPIRFK------EKPYWI 328
            Q Y  G+     C    LDHGVL+VGYGS            + +R K       K YWI
Sbjct: 410 FQLYSHGIYYDASCSSVNLDHGVLVVGYGSGTPDSDSRVHKGSQVRVKVPKTDDTKNYWI 469

Query: 329 IKNSWGENWGENGYYKICMGR-NVCGVDSMVS 359
           +KNSWG +WG+ G+  +   R N CG+ S  S
Sbjct: 470 VKNSWGTSWGDKGFIYMSKDRDNNCGIASCAS 501


>gi|2511693|emb|CAB17076.1| cysteine proteinase precursor [Phaseolus vulgaris]
          Length = 455

 Score =  210 bits (535), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 118/294 (40%), Positives = 170/294 (57%), Gaps = 25/294 (8%)

Query: 59  KFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGL-- 116
           K  K Y    E D RF++FK NLR   ++   + T   G+ +F+DLT  E+R ++LG   
Sbjct: 46  KHGKLYNALGEKDKRFQIFKDNLRFIDQQNAENRTYKLGLNRFADLTNEEYRARYLGTKI 105

Query: 117 --NRRL-RLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGA 173
             NRRL R P++     +  T  LP   DWR  GAV  VKDQ +CGSCW+FSA GA+EG 
Sbjct: 106 DPNRRLGRTPSNRYAPRVGET--LPDSVDWRKEGAVVPVKDQASCGSCWAFSAIGAVEGI 163

Query: 174 HFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYP 233
           + + TG+L+SLSEQ+LVDCD           + GCNGGLM+ AFE+I+K GG++ E+DYP
Sbjct: 164 NKIVTGDLISLSEQELVDCDT--------GYNMGCNGGLMDYAFEFIIKNGGIDSEEDYP 215

Query: 234 YTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGIN--AVWMQTYIGG 291
           Y G DG   ++ K+    ++  +  +++ ++      V + P++V +       Q Y  G
Sbjct: 216 YKGVDGRCDEYRKNAKVVSIDGYEDVNTYDELALKKAVANQPVSVAVEGGGREFQLYSSG 275

Query: 292 VSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKI 345
           V     CG  LDHGV+ VGYG+            +WI++NSWG +WGE GY ++
Sbjct: 276 VFTGR-CGTALDHGVVAVGYGTD-------NGHDFWIVRNSWGADWGEEGYIRL 321


>gi|79331505|ref|NP_001032106.1| thiol protease aleurain [Arabidopsis thaliana]
 gi|332009931|gb|AED97314.1| thiol protease aleurain [Arabidopsis thaliana]
          Length = 357

 Score =  210 bits (534), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 133/341 (39%), Positives = 182/341 (53%), Gaps = 35/341 (10%)

Query: 26  DDDAMIRQVVPSDG----EQSEDHLLNAEHH---FSLFKSKFSKTYATQEEHDYRFRVFK 78
           D+   IR V  SDG    E+S   +L    H   F+ F  ++ K Y   EE   RF +FK
Sbjct: 27  DESNPIRMV--SDGLREVEESVSQILGQSRHVLSFARFTHRYGKKYQNVEEMKLRFSIFK 84

Query: 79  ANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLP 138
            NL   +       +   GV +F+DLT  EF+R  LG  +     A  + +  +    LP
Sbjct: 85  ENLDLIRSTNKKGLSYKLGVNQFADLTWQEFQRTKLGAAQNC--SATLKGSHKVTEAALP 142

Query: 139 TDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDP 198
              DWR+ G V+ VKDQG CGSCW+FS TGALE A+  + G+ +SLSEQQLVDC    + 
Sbjct: 143 ETKDWREDGIVSPVKDQGGCGSCWTFSTTGALEAAYHQAFGKGISLSEQQLVDCAGAFN- 201

Query: 199 EESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAV---SN 255
                 + GCNGGL + AFEYI   GG++ EK YPYTG D  +CKF    +   V    N
Sbjct: 202 ------NYGCNGGLPSQAFEYIKSNGGLDTEKAYPYTGKD-ETCKFSAENVGVQVLNSVN 254

Query: 256 FSVISSDEDQMAANLVKHGPLAVGINAVW-MQTYIGGVSCPYICGKY---LDHGVLIVGY 311
            ++ + DE + A  LV+  P+++    +   + Y  GV     CG     ++H VL VGY
Sbjct: 255 ITLGAEDELKHAVGLVR--PVSIAFEVIHSFRLYKSGVYTDSHCGSTPMDVNHAVLAVGY 312

Query: 312 GSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVC 352
           G            PYW+IKNSWG +WG+ GY+K+ MG+N+C
Sbjct: 313 GVEDGV-------PYWLIKNSWGADWGDKGYFKMEMGKNMC 346


>gi|89272015|emb|CAJ83143.1| cathepsin L2 [Xenopus (Silurana) tropicalis]
          Length = 335

 Score =  210 bits (534), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 124/319 (38%), Positives = 177/319 (55%), Gaps = 22/319 (6%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH----GVTKFSDLT 105
           ++H++L+K+   K+YA +EE  +R  +++ NLR  +   L      H    G+ +F D+T
Sbjct: 26  DNHWNLWKNWHKKSYAPKEE-GWRRVLWEKNLRMIEFHNLEHSLGKHSHSLGMNQFGDMT 84

Query: 106 PSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFS 165
             EFR+   G   + ++      AP     + P   DWR  G VT VKDQG CGSCW+FS
Sbjct: 85  NEEFRQLMNGYKNQKKIRGSTFLAP--NNFESPKSVDWRKKGYVTPVKDQGQCGSCWAFS 142

Query: 166 ATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGG 225
            TGALEG H+ +TG+++SLSEQ LVDC            + GCNGGLM+ AF+Y+   GG
Sbjct: 143 TTGALEGQHYRNTGKMISLSEQNLVDC-------SRAQGNQGCNGGLMDQAFQYVKDNGG 195

Query: 226 VEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKH-GPLAVGINA-- 282
           ++ E  YPYT  D   C +D +  +A  + F  ++S+ ++   N V   GP++V ++A  
Sbjct: 196 IDSEDSYPYTAKDDQECHYDPNYNSANDTGFVDVTSESEKDLMNAVASVGPVSVAVDAGH 255

Query: 283 VWMQTYIGGVSC-PYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENG 341
              Q Y  G+   P    + LDHGVL+VGYG  G        K YWI+KNSW E WG +G
Sbjct: 256 QSFQFYKSGIYYEPECSSEDLDHGVLVVGYGFEGEDE---DGKKYWIVKNSWSEKWGNDG 312

Query: 342 YYKICMGR-NVCGVDSMVS 359
           Y  I   R N CG+ +  S
Sbjct: 313 YIYIAKDRHNHCGIATAAS 331


>gi|18138384|ref|NP_542680.1| cathepsin [Helicoverpa zea SNPV]
 gi|209401110|ref|YP_002273979.1| viral cathepsin-like protein [Helicoverpa armigera NPV NNg1]
 gi|37077430|sp|Q8V5U0.1|CATV_NPVHZ RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|18028766|gb|AAL56202.1|AF334030_127 ORF57 [Helicoverpa zea SNPV]
 gi|209364362|dbj|BAG74621.1| viral cathepsin-like protein [Helicoverpa armigera NPV NNg1]
          Length = 367

 Score =  210 bits (534), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 124/328 (37%), Positives = 180/328 (54%), Gaps = 38/328 (11%)

Query: 45  HLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRR--AKRRQL----------LDP 92
           +L  +E +F  F  +++K+Y   +E+ YR+ VFK NL +  ++ R+           L  
Sbjct: 49  NLDQSEIYFKHFLQQYNKSYDDPKEYQYRYNVFKDNLNKINSQNRENLLNNKNNNDSLST 108

Query: 93  TAVHGVTKFSDLTPSEFRRQ----FLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGA 148
           +A  GV KFSD TP E        FL L++   L  + +     P   LP  +DWRD   
Sbjct: 109 SAQFGVNKFSDKTPDEVLHSNTGFFLNLSQHYTL-CENRIVKGAPDIRLPDYYDWRDTNK 167

Query: 149 VTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGC 208
           VT +KDQG CGSCW+F A G +E  + +   +L+ LSEQQL+DCD           D GC
Sbjct: 168 VTPIKDQGVCGSCWAFVAIGNIESQYAIRHNKLIDLSEQQLLDCD---------EVDLGC 218

Query: 209 NGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMA 267
           NGGLM+ AF+ +L  GGVE E DYPY G++   C  D  KIA  +++ F     DE+++ 
Sbjct: 219 NGGLMHLAFQELLLMGGVETEADYPYQGSE-QMCTLDNRKIAVKLNSCFKYDIRDENKLK 277

Query: 268 ANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPY 326
             +   GP+A+ ++A+ +  Y  G+     C  Y L+H VL++G+G            PY
Sbjct: 278 ELVYTTGPVAIAVDAMDIINYRRGILNQ--CHIYDLNHAVLLIGWGIEN-------NVPY 328

Query: 327 WIIKNSWGENWGENGYYKICMGRNVCGV 354
           WIIKNSWGE+WGENG+ ++    N CG+
Sbjct: 329 WIIKNSWGEDWGENGFLRVRRNVNACGL 356


>gi|209170907|ref|YP_002268053.1| agip23 [Agrotis ipsilon multiple nucleopolyhedrovirus]
 gi|208436498|gb|ACI28725.1| viral cathepsin [Agrotis ipsilon multiple nucleopolyhedrovirus]
          Length = 364

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 122/365 (33%), Positives = 202/365 (55%), Gaps = 30/365 (8%)

Query: 4   LILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKT 63
           +I++  LL LL  ++++A+   +D      + P+       ++ +A  +F  F S+++K 
Sbjct: 25  IIMNKSLLFLL--LVSTALTRQNDAVHTPTIKPT-----LYNINSAPLYFEKFISQYNKH 77

Query: 64  YATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLP 123
           Y  ++E  YR+ +F+ N+     +   + +AV+ + +F+D+T +E   +  GL     L 
Sbjct: 78  YKNEDEKKYRYNIFRHNIESINHKNSRNDSAVYKINRFADMTKNEVVIRHTGLASG-ELG 136

Query: 124 ADAQKAPILP---TNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGE 180
            +  +  ++        PT FDWR    VT VKDQG CG+CW+F+  GALE  + +    
Sbjct: 137 VNFCETIVVDGPGQRQRPTSFDWRTLNKVTSVKDQGMCGACWAFAGLGALESQYAIKYDR 196

Query: 181 LVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGG 240
           L+ LSEQQLVDCDH          D GC+GGL+++A+E I++ GGVE++ DYPY   +  
Sbjct: 197 LIDLSEQQLVDCDH---------VDMGCDGGLIHTAYEEIMRMGGVEQDFDYPYRA-ERQ 246

Query: 241 SCKFDKSKIAAAV-SNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICG 299
            C     K AA V S +  +  +E+++   L   GP+A+ ++AV +  Y GG+   +   
Sbjct: 247 PCALKPHKFAAGVRSCYRYVLLNEERLEDLLRHVGPIAIAVDAVDITDYYGGI-VSFCEN 305

Query: 300 KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVS 359
             L+H VL+VGYG            PYWI+KNSWG ++GE+GY ++  G N CG+ + ++
Sbjct: 306 NGLNHAVLLVGYGVE-------NNVPYWILKNSWGSDYGEDGYVRVRRGVNSCGMINELA 358

Query: 360 SVAAI 364
           S A +
Sbjct: 359 SSAQV 363


>gi|125811033|ref|XP_001361727.1| GA25021 [Drosophila pseudoobscura pseudoobscura]
 gi|54636904|gb|EAL26307.1| GA25021 [Drosophila pseudoobscura pseudoobscura]
          Length = 341

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 139/370 (37%), Positives = 192/370 (51%), Gaps = 49/370 (13%)

Query: 6   LSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYA 65
           + + L+L L +++A A AV+  + +          Q E H    EH          K Y 
Sbjct: 1   MRTALILPLLALVAVAQAVSYAEVI----------QEEWHTFKLEHR---------KNYQ 41

Query: 66  TQEEHDYRFRVFKANLRR-AKRRQLLDPTAVH---GVTKFSDLTPSEFRRQFLGLN---- 117
            + E  +R ++F  N  + AK  QL    AV     V K++D+   EF     G N    
Sbjct: 42  DETEERFRLKIFNENKHKIAKHNQLWATGAVSFKMAVNKYADMLHHEFYSTMNGFNYTLH 101

Query: 118 RRLRLPADAQKAPILPTND---LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAH 174
           ++LR   ++ K     + +   LP   DWR  GAVT VKDQG CGSCW+FS+TGALEG H
Sbjct: 102 KQLRNADESFKGVTFISPEHVTLPKQVDWRTKGAVTDVKDQGHCGSCWAFSSTGALEGQH 161

Query: 175 FLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPY 234
           +  +G LVSLSEQ LVDC        +   ++GCNGGLM++AF YI   GG++ EK YPY
Sbjct: 162 YRKSGVLVSLSEQNLVDC-------STKYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYPY 214

Query: 235 TGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGG 291
              D  SC F+K  I A    F  +   +E +MA  +   GP+AV I+A     Q Y  G
Sbjct: 215 EAID-DSCHFNKGTIGATDRGFVDIPQGNEKKMAEAVATIGPVAVAIDASHESFQFYSEG 273

Query: 292 VSCPYIC-GKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR- 349
           V     C  + LDHGVL+VG+G+          + YW++KNSWG  WG+ G+ K+   + 
Sbjct: 274 VYNEPACDAQNLDHGVLVVGFGTDESG------QDYWLVKNSWGTTWGDKGFIKMLRNKE 327

Query: 350 NVCGVDSMVS 359
           N CG+ S  S
Sbjct: 328 NQCGIASASS 337


>gi|297843784|ref|XP_002889773.1| hypothetical protein ARALYDRAFT_471096 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297335615|gb|EFH66032.1| hypothetical protein ARALYDRAFT_471096 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 439

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 129/327 (39%), Positives = 185/327 (56%), Gaps = 34/327 (10%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLL-DPTAVHGVTKFSDLTPSEFRR 111
           F  +  +  KTY ++EE   R ++FK N     +  L+ + T    +  F+DLT  EF+ 
Sbjct: 32  FDDWCQRHGKTYGSEEERQQRIQIFKDNHDFVTQHNLITNATYSLSLNAFADLTHHEFKA 91

Query: 112 QFLGLNRRLRLPADAQKAPILPTN-DLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGAL 170
             LGL+        A K   L  N  +P   DWR  GAVT VKDQG+CG+CWSFSATGA+
Sbjct: 92  SRLGLSVSASSLIMASKGQSLGGNAKVPDSVDWRKKGAVTNVKDQGSCGACWSFSATGAM 151

Query: 171 EGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREK 230
           EG + + TG+L+SLSEQ+L+DCD         S ++GCNGGLM+ AFE+++K  G++ EK
Sbjct: 152 EGINQIVTGDLISLSEQELIDCDK--------SYNAGCNGGLMDYAFEFVIKNHGIDTEK 203

Query: 231 DYPYTGTDGGSCKFDKSK-IAAAVSNFSVISSDEDQMAANLVKHGPLAVGI----NAVWM 285
           DYPY   D G+CK DK K     + +++ + S++++     V   P++VGI     A  +
Sbjct: 204 DYPYQERD-GTCKKDKLKQKVVTIDSYAGVKSNDEKALREAVAAQPVSVGICGSERAFQL 262

Query: 286 QTYIGGV-SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYK 344
            + + G+ S P  C   LDH VLIVGYGS            YWI+KNSWG++WG +G+  
Sbjct: 263 YSRVSGIFSGP--CSTSLDHAVLIVGYGSQNGV-------DYWIVKNSWGKSWGMDGFMH 313

Query: 345 ICMGRN------VCGVDSMVSSVAAIH 365
             M RN      +CG++ + S     H
Sbjct: 314 --MQRNTGNSEGICGINMLASYPIKTH 338


>gi|313224805|emb|CBY20597.1| unnamed protein product [Oikopleura dioica]
          Length = 343

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 123/313 (39%), Positives = 173/313 (55%), Gaps = 21/313 (6%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRR-AKRRQLLDPTAVHGVTKFSDLTPSEFRR 111
           F  ++ +FSK Y T EE   R + F  N        Q  D T   G+   +DLT SEF+ 
Sbjct: 42  FRQYEVEFSKMYETAEERRIRAQTFSKNFEMITSHNQREDVTWTMGLNFDADLTFSEFQS 101

Query: 112 QFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALE 171
           ++L +++     A + +   +    LP +FDWR+HG V+ VK+QG CGSCW+FS TG LE
Sbjct: 102 RYLMVSQDC--SATSTRDLDIDILSLPENFDWREHGGVSPVKNQGHCGSCWTFSTTGCLE 159

Query: 172 GAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKD 231
            AH +   +  +LSEQQLVDC  + D       + GCNGGL + AFEYI   GG+E E+D
Sbjct: 160 SAHLIHHKKAYNLSEQQLVDCAQDFD-------NHGCNGGLPSHAFEYIHYVGGLEEEQD 212

Query: 232 YPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVGINAV-WMQTYI 289
           Y Y   + G C+FD +K A  V   F++  +DEDQ+   L    P++V    V   + Y 
Sbjct: 213 YSYHAEE-GLCEFDPTKTAGTVREVFNITETDEDQLTIALAYFNPVSVAFEVVDGFRFYK 271

Query: 290 GGVSCPYICG---KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKIC 346
            GV     C    + ++H VL VGYG       +  E PY+I+KNSWG  WG+ G++KI 
Sbjct: 272 EGVYQSDTCKSGPEDVNHAVLAVGYGM-----CKKCETPYFIVKNSWGAEWGDEGFFKIK 326

Query: 347 MGRNVCGVDSMVS 359
            G N+CG+ +  S
Sbjct: 327 RGENMCGIATCAS 339


>gi|37651368|ref|NP_932731.1| cathepsin [Choristoneura fumiferana DEF MNPV]
 gi|82024252|sp|Q6VTL7.1|CATV_NPVCD RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|37499277|gb|AAQ91676.1| cathepsin [Choristoneura fumiferana DEF MNPV]
          Length = 324

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 115/326 (35%), Positives = 179/326 (54%), Gaps = 28/326 (8%)

Query: 46  LLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLT 105
           LL A  +F  F   F+K Y+++ E  +RF++F+ NL     + L D +A + + KFSDL+
Sbjct: 21  LLKAPSYFEDFLHNFNKNYSSKSEKLHRFKIFQHNLEEIINKNLNDTSAQYEINKFSDLS 80

Query: 106 PSEFRRQFLGLNRRLRLPADAQ---KAPIL--PTNDLPTDFDWRDHGAVTGVKDQGACGS 160
             E   ++ GL+    LP   Q   +  +L  P +  P +FDWR    VT VK+QG CG+
Sbjct: 81  KDETISKYTGLS----LPLQNQNFCEVVVLNRPPDKGPLEFDWRRLNKVTSVKNQGTCGA 136

Query: 161 CWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYI 220
           CW+F+  G+LE    +   +L++LSEQQL+DCD           D GC+GGL+++A+E +
Sbjct: 137 CWAFATLGSLESQFAIKHDQLINLSEQQLIDCDF---------VDMGCDGGLLHTAYEAV 187

Query: 221 LKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVG 279
           +  GG++ E DYPY   + G C+ + +K    V   +  +   E+++   L   GPL V 
Sbjct: 188 MNMGGIQAENDYPYEANN-GDCRLNAAKFVVKVKKCYRYVLMFEEKLKDLLRIVGPLPVA 246

Query: 280 INAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGE 339
           I+A  +  Y  GV   Y     L+H VL+VGY             P+WI+KN+WG +WGE
Sbjct: 247 IDASDIVNYKRGV-IRYCANHGLNHAVLLVGYAVENGV-------PFWILKNTWGTDWGE 298

Query: 340 NGYYKICMGRNVCGVDSMVSSVAAIH 365
            GY+++    N CG+ + + S A I+
Sbjct: 299 QGYFRVQQNINACGIQNELPSSAEIY 324


>gi|118486542|gb|ABK95110.1| unknown [Populus trichocarpa]
          Length = 465

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 118/297 (39%), Positives = 165/297 (55%), Gaps = 22/297 (7%)

Query: 59  KFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLN- 117
           K  K Y    E + RF +FK NL    +    + T   G+ +F+DLT  EFR  +LG   
Sbjct: 57  KHGKNYNALGEKEKRFEIFKDNLMFIDQHNSENRTYTVGLNRFADLTNEEFRSMYLGTRT 116

Query: 118 -RRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFL 176
             + RLP  + +      + LP   DWR  GAV  VKDQG CGSCW+FS   A+EG + +
Sbjct: 117 GHKKRLPKTSDRYAPRVGDSLPDSVDWRKEGAVAEVKDQGGCGSCWAFSTIAAVEGINKI 176

Query: 177 STGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTG 236
            TG+L++LSEQ+LVDCD         S + GCNGGLM+ AFE+I+  GG++ E DYPY G
Sbjct: 177 VTGDLIALSEQELVDCDT--------SYNEGCNGGLMDYAFEFIINNGGIDTEDDYPYLG 228

Query: 237 TDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSC 294
            DG    + K+    ++ ++  +  +++      V + P++V I       Q Y  GV  
Sbjct: 229 RDGRCDTYRKNAKVVSIDSYEDVPENDETALKKAVANQPVSVAIEGGGRNFQLYNSGVFT 288

Query: 295 PYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNV 351
              CG  LDHGV  VGYG+        K K YWI++NSWG++WGE+GY +  M RN+
Sbjct: 289 GE-CGTSLDHGVAAVGYGTE-------KGKDYWIVRNSWGKSWGESGYIR--MERNI 335


>gi|320169652|gb|EFW46551.1| cathepsin L2 [Capsaspora owczarzaki ATCC 30864]
          Length = 325

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 127/317 (40%), Positives = 174/317 (54%), Gaps = 26/317 (8%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTPSEFRR 111
           F+ +K+  ++ YA+ +E   R  ++ +NL            +   G+ +F DL   EF  
Sbjct: 21  FAEWKALHNRQYASAQEEALRQEIYLSNLELINEHNAAGRHSYTLGMNEFGDLAHHEFAA 80

Query: 112 QFLGLN-RRLRLPADAQKAPILPTN-DLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGA 169
           ++LG+    +        +  LP    LP   DWR  G VT VK+QG CGSCWSFS TG+
Sbjct: 81  KYLGVRFNGVNATKSFASSTYLPRMVSLPDSVDWRTAGIVTPVKNQGQCGSCWSFSTTGS 140

Query: 170 LEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVERE 229
           +EG H   TG LVSLSEQ LVDC  +   E       GCNGGLM+ AFEYI+K GG++ E
Sbjct: 141 VEGQHARKTGTLVSLSEQNLVDCSSQEGNE-------GCNGGLMDDAFEYIIKNGGIDTE 193

Query: 230 KDYPYTGTDGGSCKFDKSKIAAAVSNFS-VISSDEDQMAANLVKHGPLAVGINA--VWMQ 286
             YPYT T  G+CKF+ + I A V+++  +I+  E  +   +   GP++V I+A  +  Q
Sbjct: 194 ASYPYTATT-GTCKFNAANIGATVASYQDIITGSESDLQNAVATVGPVSVAIDASHINFQ 252

Query: 287 TYIGGVSCPYICG-KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKI 345
            Y  GV     C    LDHGVL VGYG+S       + K YW++KNSWG  WG+ GY  I
Sbjct: 253 FYFTGVYNEKKCSTTQLDHGVLAVGYGTST------EGKDYWLVKNSWGATWGKAGY--I 304

Query: 346 CMGRNV---CGVDSMVS 359
            M RN    CG+ +  S
Sbjct: 305 WMSRNADNQCGIATSAS 321


>gi|340380715|ref|XP_003388867.1| PREDICTED: pro-cathepsin H-like [Amphimedon queenslandica]
          Length = 347

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 134/362 (37%), Positives = 192/362 (53%), Gaps = 39/362 (10%)

Query: 9   LLLLLLSSVLASAVAVND-DDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQ 67
           +LL LL+S    +++ +  DD ++ + V    E            F  +  K  KTYAT 
Sbjct: 10  ILLFLLASFTDVSLSFDPLDDFVMSESVQRAAE------------FERWTIKHKKTYATA 57

Query: 68  EEHDYRFRVFKANLRRAKR-RQLLDPTAVHGVTKFSDLTPSEFRRQFLGLN-RRLRLPAD 125
           EE+++R RV+ AN    KR  +   P     + +F+DLT +EF+R +L  + +  R    
Sbjct: 58  EEYNWRLRVYTANHYYVKRLNEGHGPATEFELNQFADLTFAEFKRIYLSSSSQHCRATTG 117

Query: 126 AQKAPILPTN-DLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSL 184
             + P+   N + P   DWR    +T V+DQG+CGSCW+FSAT  L     L TG+L+SL
Sbjct: 118 NFQMPVKKNNVEDPVAIDWRKRNVITPVRDQGSCGSCWAFSATSCLSAHLALKTGQLISL 177

Query: 185 SEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKF 244
           S+QQL+DC    +       + GC GGL + AFEYI   GG+E E+DYPY   +   C F
Sbjct: 178 SKQQLLDCSRSFN-------NRGCKGGLPSQAFEYIRYNGGIESERDYPYKDRE-EKCHF 229

Query: 245 DKSKIAAAVS---NFSVISSDEDQMAANLVKHGPLAVGINAVW-MQTYIGGVSCPYICGK 300
             S +AA V+   NF+     ED +A  L   GP+++GI++     TY  G+    +C K
Sbjct: 230 KPSLVAATVTGVVNFT--QGAEDDIAVALANIGPVSIGIHSTKSFATYKKGIYQGKLCSK 287

Query: 301 ---YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSM 357
               ++H VLIVGY  +         + YWI KNSWG NWG NGY+ I  G N CG+ + 
Sbjct: 288 NPRKINHAVLIVGYDQTA------SGEKYWIGKNSWGTNWGMNGYFWIRRGHNACGLATC 341

Query: 358 VS 359
            S
Sbjct: 342 AS 343


>gi|113195461|ref|YP_717598.1| V-CATH [Clanis bilineata nucleopolyhedrosis virus]
 gi|66968272|gb|AAY59557.1| V-CATH [Clanis bilineata nucleopolyhedrosis virus]
          Length = 325

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 118/325 (36%), Positives = 180/325 (55%), Gaps = 26/325 (8%)

Query: 46  LLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLT 105
           LL A  +F  F + ++K Y   +E  YR+++FK NL     +  ++  AV  + KFSD++
Sbjct: 20  LLKAPDYFESFVANYNKMYNDTQEKAYRYKIFKHNLEEINIKNQVEDHAVFSINKFSDMS 79

Query: 106 PSEFRRQFLGLNRRLRLPADAQKAPIL--PTNDLPTDFDWRDHGAVTGVKDQGACGSCWS 163
            SE   ++ GL+    +  +  +A IL  P N  P +FDWR + AVT V+ QG CGSCW+
Sbjct: 80  KSEIISKYTGLSLPSLMQENFCRAIILDGPPNKAPINFDWRQYNAVTPVRVQGNCGSCWA 139

Query: 164 FSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA 223
           FS    +E  + +   + +SLS QQLVDCD         + + GC GGL+++A E I+ A
Sbjct: 140 FSTLAGIESQYSIKYNKQISLSVQQLVDCD---------TSNMGCAGGLLHTALEQIINA 190

Query: 224 -GGVEREKDYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVGIN 281
            GGV +E+DYPY G D   C    +  A  V   +  I  +E+++   L   GP+ V I+
Sbjct: 191 GGGVLQEEDYPYKGVD-KQCNLPHNNFAVQVLGCYRYIVMNEEKLKDVLRAVGPIPVAID 249

Query: 282 AVWMQTYIGGV--SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGE 339
           A  +  Y  G+  +C Y     L+H VL+VGYG            PYW +KN+WG++WGE
Sbjct: 250 AASIVDYSRGIIRTCTYYG---LNHAVLLVGYGVQDGV-------PYWTLKNTWGDDWGE 299

Query: 340 NGYYKICMGRNVCGVDSMVSSVAAI 364
           +GY+++    N CG+ + ++S A I
Sbjct: 300 HGYFRVRQNVNSCGIINDLASTAVI 324


>gi|393660044|gb|AFN09033.1| V-Cath [Bombyx mori NPV]
          Length = 323

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 117/325 (36%), Positives = 181/325 (55%), Gaps = 29/325 (8%)

Query: 47  LNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTP 106
           L A ++F  F  +F+K Y+++ E   RF++F+ NL     +   D +A + + KFSDL+ 
Sbjct: 22  LKAPNYFEEFVHRFNKNYSSEVEKLRRFKIFQHNLNEIINKNQND-SAKYEINKFSDLSK 80

Query: 107 SEFRRQFLGLNRRLRLPADAQ---KAPIL--PTNDLPTDFDWRDHGAVTGVKDQGACGSC 161
            E   ++ GL+    LP   Q   K  +L  P    P +FDWR    VT VK+QG CG+C
Sbjct: 81  DETIAKYTGLS----LPTQTQNFCKVILLDQPPGKGPLEFDWRRLNKVTSVKNQGMCGAC 136

Query: 162 WSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYIL 221
           W+F+  G+LE    +   EL++LSEQQ++DCD           D+GCNGGL+++AFE I+
Sbjct: 137 WAFATLGSLESQFAIKHNELINLSEQQMIDCDF---------VDAGCNGGLLHTAFEAII 187

Query: 222 KAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVGI 280
           K GGV+ E DYPY   D  +C+ + +K    V + +  I   E+++   L   GP+ + I
Sbjct: 188 KMGGVQLESDYPYEA-DNNNCRMNSNKFLVQVKDCYRYIIVYEEKLKDLLRLVGPIPMAI 246

Query: 281 NAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGEN 340
           +A  +  Y  G+   Y     L+H VL+VGYG            PYW  KN+WG +WGE+
Sbjct: 247 DAADIVNYKQGI-IKYCFNSGLNHAVLLVGYGVEN-------NIPYWTFKNTWGTDWGED 298

Query: 341 GYYKICMGRNVCGVDSMVSSVAAIH 365
           G++++    N CG+ + ++S A I+
Sbjct: 299 GFFRVQQNINACGMRNELASTAVIY 323


>gi|357619727|gb|EHJ72186.1| cathepsin [Danaus plexippus]
          Length = 336

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 125/348 (35%), Positives = 187/348 (53%), Gaps = 32/348 (9%)

Query: 9   LLLLLLSSVLASAVAVNDDDAMIRQV-VPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQ 67
           +++ +L ++  +A A  +D + + +V  P      E  +L     F  F  +++K Y ++
Sbjct: 1   MIVFVLCAISFTAAAPQNDVSDVEKVRKPVFYSMDEAPIL-----FENFIREYNKKYDSK 55

Query: 68  EEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQ 127
           E+ + RF++F  NL+R          AVHG+ KF+DL+  EF++ + G         D  
Sbjct: 56  EKEE-RFKIFVNNLKRINDLNHKSTNAVHGINKFTDLSKEEFKKFYTGFKPDKSFLDDNI 114

Query: 128 KAPILPTNDL--PTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLS 185
           K P   + ++  P  FDWRD G VT VK+QG CGSCW+FS  G +E  + +  G LV LS
Sbjct: 115 KKPSQLSFNITAPPAFDWRDKGVVTRVKNQGTCGSCWAFSTIGNVESVNAIKHGNLVELS 174

Query: 186 EQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFD 245
           EQQLVDCD         S D  C+ GL ++A +Y++  G +  E+ YPY G    +C +D
Sbjct: 175 EQQLVDCD---------SKDEACDSGLPDNAQQYLVSHGAIS-EQSYPYKGY-AANCTYD 223

Query: 246 KSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGV---SCPYICGKYL 302
            S++   +SNF  +   E QMA  L    PL++ I A  + TY  G+    C     + L
Sbjct: 224 SSQVVVRLSNFEKVVLSECQMAEKLYSTAPLSIVIAAEVLGTYTKGILVNECEQ--SQDL 281

Query: 303 DHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRN 350
           +H VL+VGYG+ G          +WI+KNSWG NWGE GY++I  G N
Sbjct: 282 NHAVLLVGYGNEG-------GTNFWILKNSWGTNWGEGGYFRIKRGVN 322


>gi|195153545|ref|XP_002017686.1| GL17172 [Drosophila persimilis]
 gi|194113482|gb|EDW35525.1| GL17172 [Drosophila persimilis]
          Length = 341

 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 139/370 (37%), Positives = 192/370 (51%), Gaps = 49/370 (13%)

Query: 6   LSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYA 65
           + + L+L L +++A A AV+  + +          Q E H    EH          K Y 
Sbjct: 1   MRTALILPLLALVAVAQAVSYAEVI----------QEEWHTFKLEHR---------KNYQ 41

Query: 66  TQEEHDYRFRVFKANLRR-AKRRQLLDPTAVH---GVTKFSDLTPSEFRRQFLGLN---- 117
            + E  +R ++F  N  + AK  QL    AV     V K++D+   EF     G N    
Sbjct: 42  DETEERFRLKIFNENKHKIAKHNQLWATGAVSFKMAVNKYADMLHHEFYSTMNGFNYTLH 101

Query: 118 RRLRLPADAQKAPILPTND---LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAH 174
           ++LR   ++ K     + +   LP   DWR  GAVT VKDQG CGSCW+FS+TGALEG H
Sbjct: 102 KQLRNADESFKGVTFISPEHVTLPKQVDWRTKGAVTDVKDQGHCGSCWAFSSTGALEGQH 161

Query: 175 FLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPY 234
           +  +G LVSLSEQ LVDC        +   ++GCNGGLM++AF YI   GG++ EK YPY
Sbjct: 162 YRKSGVLVSLSEQNLVDC-------STKYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYPY 214

Query: 235 TGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGG 291
              D  SC F+K  I A    F  +   +E +MA  +   GP+AV I+A     Q Y  G
Sbjct: 215 EAID-DSCHFNKGSIGATDRGFVDIPQGNEKKMAEAVATIGPVAVAIDASHESFQFYSEG 273

Query: 292 VSCPYIC-GKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR- 349
           V     C  + LDHGVL+VG+G+          + YW++KNSWG  WG+ G+ K+   + 
Sbjct: 274 VYNEPACDAQNLDHGVLVVGFGTDESG------EDYWLVKNSWGTTWGDKGFIKMLRNKE 327

Query: 350 NVCGVDSMVS 359
           N CG+ S  S
Sbjct: 328 NQCGIASASS 337


>gi|118360450|ref|XP_001013459.1| Papain family cysteine protease containing protein [Tetrahymena
           thermophila]
 gi|89295226|gb|EAR93214.1| Papain family cysteine protease containing protein [Tetrahymena
           thermophila SB210]
          Length = 320

 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 130/315 (41%), Positives = 182/315 (57%), Gaps = 39/315 (12%)

Query: 48  NAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH-GVTKFSDLTP 106
           N +  +S FK+ ++K YA  +   YR  VF  NL+      ++D    + G+TKF DLT 
Sbjct: 38  NIKTLWSTFKNSYNKKYADPDFEQYRIEVFTENLK------IIDSNCQNFGITKFMDLTQ 91

Query: 107 SEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDF--DWRDHGAVTGVKDQGACGSCWSF 164
            EF++ +L L  +  +    ++ P    ND   D   DW   GAVT VKDQG CGSCWSF
Sbjct: 92  EEFKQTYLTLKTKKYI----EEIPETVFNDSNGDIEIDWTMKGAVTPVKDQGKCGSCWSF 147

Query: 165 SATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAG 224
           S TGA+EGAHFLS+ ELVSLSEQ L+DC        S + + GCNGGLM++AF++I +  
Sbjct: 148 STTGAVEGAHFLSSNELVSLSEQYLIDC--------SKNGNEGCNGGLMDTAFDFIAQ-N 198

Query: 225 GVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW 284
           G+  E  YPY   D G+CK         +S++  I S  D ++   ++  P+A+ ++A  
Sbjct: 199 GIPTENAYPYKALD-GTCKMTTG--PYKISSYQNIISCNDLLSK--LQKQPIAIAVDANN 253

Query: 285 MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYK 344
            Q Y  G+     CGK LDHGVL+VGY S        K+K +W +KNSWG +WGE+GY +
Sbjct: 254 FQFYTKGIFSK--CGKNLDHGVLLVGYSS--------KDK-FWKVKNSWGSSWGEDGYIR 302

Query: 345 ICMGRNVCGVDSMVS 359
           +  G N CG+ +  S
Sbjct: 303 LSAG-NTCGLCNQAS 316


>gi|118425914|gb|ABK90856.1| cathepsin-L-like cysteine peptidase [Radix peregra]
          Length = 324

 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 133/322 (41%), Positives = 179/322 (55%), Gaps = 32/322 (9%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP----TAVHGVTKFSDLT 105
           E ++++FK+K +KTY+  E+   R+ +++ NL++ +    L      T   G  K++D+T
Sbjct: 19  EANWAIFKAKHNKTYSGDEDIIRRY-IWQTNLQKIEAHNELYAKGLSTYFLGENKYADMT 77

Query: 106 PSEFRRQFLGLNRRLRL-PADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSF 164
             EFRR   GL     L P D      +  + LPT  DWR  G VT VKDQG CGSCW+F
Sbjct: 78  NEEFRRTLSGLRVDKELTPGDFVSG--MFKDSLPTAVDWRKEGYVTEVKDQGQCGSCWAF 135

Query: 165 SATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAG 224
           S TG+LEG HF +T +LVSLSE  LVDC  +         + GCNGGLM++AF+YI    
Sbjct: 136 STTGSLEGQHFKATKQLVSLSESNLVDCSKKWG-------NQGCNGGLMDNAFKYIADNK 188

Query: 225 GVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISS-DEDQMAANLVKHGPLAVGINAV 283
           G++ EK YPY   D   C F K+ + A    +  I+S  ED +   +   GP++V I+A 
Sbjct: 189 GIDTEKSYPYKPED-RKCNFKKANVGATDKLYKDITSGSEDALQEAVATIGPISVAIDAS 247

Query: 284 W--MQTYIGGVSCPYICG-KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGEN 340
               Q Y GGV     C  K LDHGVL VGY S            YWI+KNSWG++WG +
Sbjct: 248 HDSFQLYSGGVYNEKACSTKTLDHGVLAVGYDSK-------NGDDYWIVKNSWGKSWGID 300

Query: 341 GYYKICMGR---NVCGVDSMVS 359
           GY  I M R   N CG+ +M S
Sbjct: 301 GY--IWMSRNKKNQCGIATMAS 320


>gi|1834307|dbj|BAA09820.1| cysteine proteinase [Spirometra erinaceieuropaei]
 gi|1834309|dbj|BAA09821.1| cysteine proteinase [Spirometra erinaceieuropaei]
          Length = 336

 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 132/315 (41%), Positives = 179/315 (56%), Gaps = 28/315 (8%)

Query: 56  FKSKFSKTYATQEEHDYRFRVFKANL----RRAKRR-QLLDPTAVHGVTKFSDLTPSEFR 110
           +K  F K Y + EE  +R R F  NL    R  +R  Q L+  AV  +  FSDLTP EF 
Sbjct: 35  WKLAFKKEYFSSEEELHRKRAFFNNLDFIIRHNQRYYQQLESYAVR-LNDFSDLTPGEFA 93

Query: 111 RQFLGLNRRLRLPADAQKAPILPTND-LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGA 169
            ++L L   +      ++A  +P  + LP   +WR+ GAVT VK+QG CGSCWSFSA GA
Sbjct: 94  ERYLCLRGIVLTKLRRKEAVSVPLKENLPDSVNWRERGAVTSVKNQGQCGSCWSFSANGA 153

Query: 170 LEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVERE 229
           +EGA  + TG L SLSEQQL+DC  +         + GCNGGLM  AF+Y  +  GVE E
Sbjct: 154 IEGAIQIKTGALRSLSEQQLMDCSWDYG-------NQGCNGGLMPQAFQYAQRY-GVEAE 205

Query: 230 KDYPYTGTDGGSCKFDKSKIAAAVSNFSVI-SSDEDQMAANLVKHGPLAVGINAV--WMQ 286
            DY YT  D G C++ +  + A V+ ++ +   DE  +   +   GP++VGI+A      
Sbjct: 206 VDYRYTERD-GVCRYRQDLVVANVTGYAELPEGDEGGLQRAVATIGPISVGIDAADPGFM 264

Query: 287 TYIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKI 345
           +Y  GV     C  Y +DHGVL+VGYG+            YW++KNSWG +WGE+GY K+
Sbjct: 265 SYSHGVFVSKTCSPYAIDHGVLVVGYGAE-------NGDAYWLVKNSWGSSWGEDGYLKM 317

Query: 346 CMGR-NVCGVDSMVS 359
              R N+CG+ SM S
Sbjct: 318 ARNRNNMCGIASMAS 332


>gi|357619725|gb|EHJ72184.1| hypothetical protein KGM_03271 [Danaus plexippus]
          Length = 338

 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 124/356 (34%), Positives = 184/356 (51%), Gaps = 32/356 (8%)

Query: 16  SVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFR 75
           S++   V  + D   +R++    G++    L  A   F  F   ++K Y   E+ + RF+
Sbjct: 8   SMVHVLVLFSIDQCKVREL----GQRRLYSLEEAPTLFEQFIKDYNKEYDESEKEE-RFK 62

Query: 76  VFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTN 135
           +F  NL+           AV+G+ KFSDL+  EF + + GL R      +  K   LP +
Sbjct: 63  IFVNNLKDINAMNERSSNAVYGINKFSDLSKEEFIKYYTGLKREESPSNEDHKKTDLPES 122

Query: 136 ---DLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDC 192
                P  FDWR  G V+ +K+Q  CGSCW+FSA   +E  H + TG+L+ +SEQQL+DC
Sbjct: 123 FNVTAPDQFDWRKKGVVSSIKNQKHCGSCWAFSAAANVESIHAIKTGKLIDVSEQQLLDC 182

Query: 193 DHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAA 252
           D           DSGC+GGL   A  Y + A G    K YPY   + G C++D SK+   
Sbjct: 183 D---------KYDSGCSGGLPWDALRYFV-ANGAMSLKSYPYVAKE-GKCRYDSSKVEIR 231

Query: 253 VSNFSVISS-DEDQMAANLVKHGPLAVGINAVWMQTYIGGV---SCPYICGKYLDHGVLI 308
           +  + + S   EDQ+  +L   GPL++ I+   ++ Y+GG+    C  +C   ++H VL+
Sbjct: 232 LKGYKIFSKISEDQIKEHLYNIGPLSIAIDVSPIKPYVGGIVMEECHEVCQ--VNHAVLL 289

Query: 309 VGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAI 364
           VGYG             YWI+KNSWG NWGENGY+++  G N   + S   + A I
Sbjct: 290 VGYGKEYSV-------EYWIVKNSWGPNWGENGYFRMERGVNCLLLTSTGITTAVI 338


>gi|118429523|gb|ABK91809.1| cathepsin L-like proteinase precursor [Clonorchis sinensis]
          Length = 373

 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 127/317 (40%), Positives = 171/317 (53%), Gaps = 29/317 (9%)

Query: 56  FKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLL----DPTAVHGVTKFSDLTPSEFRR 111
           F + + + Y    EH+ RF++F  N  R  +  +       +   G+ +FSD T  E +R
Sbjct: 69  FMTTYKRNYIDPSEHERRFKIFANNFVRISKHNVRFIQGQVSYTMGINEFSDKTDEELKR 128

Query: 112 QFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALE 171
                   L    D  K  I      P++ DWR+ GAVT VK+QG CGSCW+FSATGA+E
Sbjct: 129 -LRCFRGSLNASRDGSKY-ITIAAPPPSEIDWRNKGAVTPVKNQGNCGSCWAFSATGAIE 186

Query: 172 GAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKD 231
           G +FL+TG LVSLSEQQLVDC  E         ++ CNGGLM++AF+Y+  + G++ E  
Sbjct: 187 GQNFLATGNLVSLSEQQLVDCSSEYG-------NNACNGGLMDNAFKYVKDSNGIDTEAS 239

Query: 232 YPY----TGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKH-GPLAVGINAVW-- 284
           YPY    TG    +C+F+  +    V+ +  +   +       V H GP++V INA    
Sbjct: 240 YPYVSGETGDANPTCRFNLKEAVVRVTGYIDLPRGQVSELKQAVGHYGPISVAINAGLPS 299

Query: 285 MQTYIGGVSCPYICGK-YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYY 343
             +Y  GV     C    LDHGVL+VGYG            PYW+IKNSWG +WGENGY 
Sbjct: 300 FMSYKSGVYSDDQCSSDDLDHGVLLVGYGEE-------NGIPYWLIKNSWGPHWGENGYV 352

Query: 344 KICMG-RNVCGVDSMVS 359
           KI     N+CGV SM S
Sbjct: 353 KILRDHNNLCGVASMAS 369


>gi|30387350|ref|NP_848429.1| cathepsin [Choristoneura fumiferana MNPV]
 gi|1168799|sp|P41715.1|CATV_NPVCF RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|332509|gb|AAA96732.1| cathepsin [Choristoneura fumiferana MNPV]
 gi|30270084|gb|AAP29900.1| cathepsin [Choristoneura fumiferana MNPV]
          Length = 324

 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 113/326 (34%), Positives = 181/326 (55%), Gaps = 28/326 (8%)

Query: 46  LLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLT 105
           +L A ++F  F  KF+K+Y+++ E   RF++F+ NL     +   D TA + + KF+DL+
Sbjct: 21  VLKAPNYFEDFLHKFNKSYSSESEKLRRFQIFRHNLEEIINKNHNDSTAQYEINKFADLS 80

Query: 106 PSEFRRQFLGLNRRLRLPADAQ---KAPIL--PTNDLPTDFDWRDHGAVTGVKDQGACGS 160
             E   ++ GL+    LP   Q   +  +L  P +  P +FDWR    VT VK+QG CG+
Sbjct: 81  KDETISKYTGLS----LPLQTQNFCEVVVLDRPPDKGPLEFDWRRLNKVTSVKNQGMCGA 136

Query: 161 CWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYI 220
           CW+F+  G+LE    +   + ++LSEQQL+DCD           D+GC+GGL+++AFE +
Sbjct: 137 CWAFATLGSLESQFAIKHNQFINLSEQQLIDCDF---------VDAGCDGGLLHTAFEAV 187

Query: 221 LKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVG 279
           +  GG++ E DYPY   + G C+ + +K    V   +  I+  E+++   L   GP+ V 
Sbjct: 188 MNMGGIQAESDYPYEANN-GDCRANAAKFVVKVKKCYRYITVFEEKLKDLLRSVGPIPVA 246

Query: 280 INAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGE 339
           I+A  +  Y  G+   Y     L+H VL+VGY             P+WI+KN+WG +WGE
Sbjct: 247 IDASDIVNYKRGIM-KYCANHGLNHAVLLVGYAVENGV-------PFWILKNTWGADWGE 298

Query: 340 NGYYKICMGRNVCGVDSMVSSVAAIH 365
            GY+++    N CG+ + + S A I+
Sbjct: 299 QGYFRVQQNINACGIQNELPSSAEIY 324


>gi|390457768|ref|XP_002742793.2| PREDICTED: cathepsin L2 [Callithrix jacchus]
          Length = 588

 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 128/329 (38%), Positives = 171/329 (51%), Gaps = 22/329 (6%)

Query: 48  NAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVT----KFSD 103
           N +  +  +K+   + Y T EE  +R  V++ N++  +          HG T     F D
Sbjct: 24  NLDTQWYQWKATHRRLYGTNEE-GWRRAVWEKNMKMIELHNGEYSQGKHGFTMAMNAFGD 82

Query: 104 LTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWS 163
           +T  EFR+  +    +        + P+L   +LP   DWR  G VT VK+Q  CGSCW+
Sbjct: 83  MTNEEFRQVMVCFRNQKHKNRKVFRGPLL--LNLPKSVDWRKKGYVTPVKNQKQCGSCWA 140

Query: 164 FSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA 223
           FSATGALEG  F  TG+LVSLSEQ LVDC H          + GCNGG MN+AF+Y+ + 
Sbjct: 141 FSATGALEGQMFRKTGKLVSLSEQNLVDCSHP-------QGNQGCNGGFMNNAFQYVKEN 193

Query: 224 GGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAV 283
           GG++ E  YPY   D GSCK+      A  + F VI + E ++   +   GP++V ++A 
Sbjct: 194 GGLDSEASYPYVAKD-GSCKYKPENSVANDTGFVVIPAHEKELMKAVATVGPISVAVDAS 252

Query: 284 W--MQTYIGGVSCPYIC-GKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGEN 340
               Q Y  G+     C  K LDHGVL+VGY   GF         YW+IKNSWG  WG N
Sbjct: 253 HSSFQFYKSGIYFEQDCSSKNLDHGVLVVGY---GFEGTNSNNNNYWLIKNSWGPEWGSN 309

Query: 341 GYYKICMGRNV-CGVDSMVSSVAAIHTTS 368
           GY KI   RN  CG+ +  S      T S
Sbjct: 310 GYIKIAKDRNNHCGIATAASYPIVWKTPS 338


>gi|15128493|dbj|BAB62718.1| plerocercoid growth factor/cysteine protease [Spirometra
           erinaceieuropaei]
 gi|15130639|dbj|BAB62799.1| plerocercoid growth factor-2/cysteine protease [Spirometra
           erinaceieuropaei]
          Length = 336

 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 132/315 (41%), Positives = 179/315 (56%), Gaps = 28/315 (8%)

Query: 56  FKSKFSKTYATQEEHDYRFRVFKANL----RRAKRR-QLLDPTAVHGVTKFSDLTPSEFR 110
           +K  F K Y + EE  +R R F  NL    R  +R  Q L+  AV  +  FSDLTP EF 
Sbjct: 35  WKLAFKKEYFSSEEELHRKRAFFNNLDFIIRHNQRYYQQLESYAVR-LNDFSDLTPGEFA 93

Query: 111 RQFLGLNRRLRLPADAQKAPILP-TNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGA 169
            ++L L   +      ++A  +P   +LP   +WR+ GAVT VK+QG CGSCWSFSA GA
Sbjct: 94  ERYLCLRGIVLTKLRRKEAVSVPLKENLPDSVNWRERGAVTSVKNQGQCGSCWSFSANGA 153

Query: 170 LEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVERE 229
           +EGA  + TG L SLSEQQL+DC  +         + GCNGGLM  AF+Y  +  GVE E
Sbjct: 154 IEGAIQIKTGALRSLSEQQLMDCSWDYG-------NQGCNGGLMPQAFQYAQRY-GVEAE 205

Query: 230 KDYPYTGTDGGSCKFDKSKIAAAVSNFSVI-SSDEDQMAANLVKHGPLAVGINAV--WMQ 286
            DY YT  D G C++ +  + A V+ ++ +   DE  +   +   GP++VGI+A      
Sbjct: 206 VDYRYTERD-GVCRYRQDLVVANVTGYAELPEGDEGGLQRAVATIGPISVGIDAADPGFM 264

Query: 287 TYIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKI 345
           +Y  GV     C  Y +DHGVL+VGYG+          + YW++KNSWG +WGE GY K+
Sbjct: 265 SYSHGVFVSKTCSPYAIDHGVLVVGYGAE-------NGEAYWLVKNSWGSSWGEGGYVKM 317

Query: 346 CMGR-NVCGVDSMVS 359
              R N+CG+ SM S
Sbjct: 318 ARNRNNMCGIASMAS 332


>gi|225428328|ref|XP_002279940.1| PREDICTED: cysteine proteinase-like [Vitis vinifera]
          Length = 707

 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 128/318 (40%), Positives = 173/318 (54%), Gaps = 31/318 (9%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           F  + SK  K Y + EE  +RF VF+ NL     R     +   G+ +F+DL+  EF+ +
Sbjct: 404 FESWVSKHGKVYKSMEEKLHRFEVFRENLNHIDERNKEVSSYWLGLNEFADLSHEEFKSK 463

Query: 113 FLGLNRRLRLPAD-AQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALE 171
           +LGL        D + +       DLP   DWR  GAVT VK+QGACGSCW+FS   A+E
Sbjct: 464 YLGLRAEFPRSRDYSGEFRYRDVADLPESVDWRKKGAVTHVKNQGACGSCWAFSTVAAVE 523

Query: 172 GAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKD 231
           G + + TG L +LSEQ+L+DCD         + +SGCNGGLM+ AF +I   GG+ +E D
Sbjct: 524 GINQIVTGNLTTLSEQELIDCD--------TTFNSGCNGGLMDYAFAFIASNGGLHKEDD 575

Query: 232 YPYTGTDGGSCKFDKSKI-AAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTY 288
           YPY   + G+C+  K  +    +S +  +   +++     + H PL+V I A     Q Y
Sbjct: 576 YPYL-MEEGTCEEQKEDVDIVTISGYEDVPEKDEESLLKALAHQPLSVAIEASGRDFQFY 634

Query: 289 IGGV-SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICM 347
            GGV + P  CG  LDHGV  VGYGSS       K   Y I+KNSWG  WGE GY  I M
Sbjct: 635 SGGVFNGP--CGTELDHGVAAVGYGSS-------KGLDYIIVKNSWGPKWGEKGY--IRM 683

Query: 348 GRN------VCGVDSMVS 359
            RN      +CG++ M S
Sbjct: 684 KRNTGKTEGLCGINKMAS 701


>gi|356508490|ref|XP_003522989.1| PREDICTED: xylem cysteine proteinase 2-like [Glycine max]
          Length = 349

 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 135/367 (36%), Positives = 197/367 (53%), Gaps = 41/367 (11%)

Query: 6   LSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYA 65
            S  L+L  S  L +++A   D +++     S+  +S D L+     F  + SK  K Y 
Sbjct: 5   FSKALVLACSFCLFASLAFGRDFSIVG--YSSEDLKSMDKLIEL---FESWMSKHGKIYQ 59

Query: 66  TQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGL----NRRLR 121
           + EE   RF +FK NL+    R  +      G+ +F+DL+  EF+ ++LGL    +RR  
Sbjct: 60  SIEEKLLRFEIFKDNLKHIDERNKVVSNYWLGLNEFADLSHQEFKNKYLGLKVDYSRRRE 119

Query: 122 LPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGEL 181
            P +     +    +LP   DWR  GAV  VK+QG+CGSCW+FS   A+EG + + TG L
Sbjct: 120 SPEEFTYKDV----ELPKSVDWRKKGAVAPVKNQGSCGSCWAFSTVAAVEGINQIVTGNL 175

Query: 182 VSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGS 241
            SLSEQ+L+DCD         + ++GCNGGLM+ AF +I++ GG+ +E+DYPY   + G+
Sbjct: 176 TSLSEQELIDCDR--------TYNNGCNGGLMDYAFSFIVENGGLHKEEDYPYI-MEEGT 226

Query: 242 CKFDKSKI-AAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYIC 298
           C+  K +     +S +  +  + +Q     + + PL+V I A     Q Y GGV   + C
Sbjct: 227 CEMTKEETEVVTISGYHDVPQNNEQSLLKALANQPLSVAIEASGRDFQFYSGGVFDGH-C 285

Query: 299 GKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRN------VC 352
           G  LDHGV  VGYG++       K   Y I+KNSWG  WGE GY  I M RN      +C
Sbjct: 286 GSDLDHGVAAVGYGTA-------KGVDYIIVKNSWGSKWGEKGY--IRMRRNIGKPEGIC 336

Query: 353 GVDSMVS 359
           G+  M S
Sbjct: 337 GIYKMAS 343


>gi|300122868|emb|CBK23875.2| unnamed protein product [Blastocystis hominis]
          Length = 316

 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 123/316 (38%), Positives = 182/316 (57%), Gaps = 33/316 (10%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEF 109
           E  F  F++K+ K Y + E  +YR +V   N+   ++    + +   G+T F+D+T +EF
Sbjct: 24  EKLFQTFEAKYGKNYLSSE-REYRKKVLAYNMDWIEKFNSDEHSFTLGMTPFADMTNTEF 82

Query: 110 RRQFLGLNRRLRLPADAQKAPILPTNDLPTD-FDWRDHGAVTGVKDQGACGSCWSFSATG 168
                 L   ++ P + ++A +L  N++  +  DWR+ GAVT VK+QG+CGSCW+FSATG
Sbjct: 83  ATS--KLCGCMKKPLNHKQARVL--NNMAVESIDWREKGAVTPVKNQGSCGSCWAFSATG 138

Query: 169 ALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVER 228
           ALEG +F++TG+LVSLSEQQLVDCD E         D+GC GG M++AFEY++K  G+  
Sbjct: 139 ALEGGNFVATGKLVSLSEQQLVDCDTE---------DAGCGGGFMDTAFEYVMKK-GLCT 188

Query: 229 EKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQ 286
           E+DYPY   D   CK D+     +++ +  + +++       +   P++V I A     Q
Sbjct: 189 EEDYPYHAKD-EDCKDDQCTSVISITGYEDVPANDGVALKQALTKAPVSVAIQADSFVFQ 247

Query: 287 TYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKIC 346
            Y GGV    +CG  L+HGVL VGY            K Y I+KNSWG +WG+ GY KI 
Sbjct: 248 MYTGGVLDSDMCGTSLNHGVLAVGYA-----------KEYIIVKNSWGASWGDKGYVKIA 296

Query: 347 ---MGRNVCGVDSMVS 359
               G  +CG++   S
Sbjct: 297 HRDQGEGICGINMAAS 312


>gi|2414570|emb|CAB16317.1| cysteine proteinase precursor [Nicotiana tabacum]
          Length = 374

 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 129/363 (35%), Positives = 192/363 (52%), Gaps = 38/363 (10%)

Query: 1   MERLILSSLLLLLLSS----VLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLF 56
           M + I+++LL  L SS    +  S +   ++    +  + SD    ED + N    + ++
Sbjct: 1   MAKTIITTLLFALFSSLSYAIDMSIIDYKNNHYARKWTLQSD----EDQVKN---RYEMW 53

Query: 57  KSKFSKTYATQEEHDYRFRVFKANLRRAK-RRQLLDPTAVHGVTKFSDLTPSEFRRQFLG 115
            ++  + Y    E + RF +FK NLR  +      + T   G+ +F+DLT  E+R  +LG
Sbjct: 54  LAEHGRAYNALGEKEKRFEIFKDNLRFIEGHNNSGNRTYKVGLNQFADLTNEEYRTMYLG 113

Query: 116 LN-----RRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGAL 170
                  R ++    +Q+    P   +P   DWR  GAV  +K+QG+CGSCW+FS   A+
Sbjct: 114 TKSDARRRFVKSKNPSQRYASRPNELMPHSVDWRKRGAVAPIKNQGSCGSCWAFSTVAAV 173

Query: 171 EGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREK 230
           EG + + TGE+++LSEQ+LVDCD           +SGCNGGLM+ AFE+I+  GG++ EK
Sbjct: 174 EGINQIVTGEMITLSEQELVDCDR--------VQNSGCNGGLMDYAFEFIISNGGMDTEK 225

Query: 231 DYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAV--WMQTY 288
            YPY G +G      K+    ++  +  +  +E  +    V H P+ V I A     Q Y
Sbjct: 226 HYPYRGVEGRCDPVRKNYKVVSIDGYEDVPRNERAL-QKAVAHQPVCVAIEASGRAFQLY 284

Query: 289 IGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMG 348
             GV     CG+ +DHGV++VGYGS            YWI++NSWG  WGENGY K  M 
Sbjct: 285 SSGVFTGE-CGEEVDHGVVVVGYGSEDGV-------DYWIVRNSWGTKWGENGYVK--ME 334

Query: 349 RNV 351
           RNV
Sbjct: 335 RNV 337


>gi|393717301|gb|AFN21222.1| V-Cath [Bombyx mori NPV]
          Length = 323

 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 117/325 (36%), Positives = 181/325 (55%), Gaps = 29/325 (8%)

Query: 47  LNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTP 106
           L A ++F  F  +F+K Y+++ E   RF++F+ NL     +   D +A + + KFSDL+ 
Sbjct: 22  LKAPNYFEEFVHRFNKNYSSEVEKLRRFKIFQHNLNEIINKNQND-SAKYEINKFSDLSK 80

Query: 107 SEFRRQFLGLNRRLRLPADAQ---KAPIL--PTNDLPTDFDWRDHGAVTGVKDQGACGSC 161
            E   ++ GL+    LP   Q   K  +L  P    P +FDWR    VT VK+QG CG+C
Sbjct: 81  DETIAKYTGLS----LPTQTQNFCKVILLDQPPGKGPLEFDWRRLNKVTSVKNQGMCGAC 136

Query: 162 WSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYIL 221
           W+F+  G+LE    +   EL++LSEQQ++DCD           D+GCNGGL+++AFE I+
Sbjct: 137 WAFATLGSLESQFAIKHNELINLSEQQMIDCDF---------VDAGCNGGLLHTAFEAII 187

Query: 222 KAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVGI 280
           K GGV+ E DYPY   D  +C+ + +K    V + +  I   E+++   L   GP+ + I
Sbjct: 188 KMGGVQLESDYPYEA-DNNNCRMNSNKFLVQVKDCYRYIIVYEEKLKDLLRLVGPIPMAI 246

Query: 281 NAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGEN 340
           +A  +  Y  G+   Y     L+H VL+VGYG            PYW  KN+WG +WGE+
Sbjct: 247 DAADIVNYKQGI-IKYCFDSGLNHAVLLVGYGVEN-------NVPYWTFKNTWGTDWGED 298

Query: 341 GYYKICMGRNVCGVDSMVSSVAAIH 365
           G++++    N CG+ + ++S A I+
Sbjct: 299 GFFRVQQNINACGMRNELASTAVIY 323


>gi|14600257|gb|AAK71314.1|AF388175_1 papain-like cysteine peptidase XBCP3 [Arabidopsis thaliana]
          Length = 437

 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 131/325 (40%), Positives = 184/325 (56%), Gaps = 32/325 (9%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLL-DPTAVHGVTKFSDLTPSEFRR 111
           F  +  K  KTY ++EE   R ++FK N     +  L+ + T    +  F+DLT  EF+ 
Sbjct: 32  FDDWCQKHGKTYGSEEERQQRIQIFKDNHDFVTQHNLITNATYSLSLNAFADLTHHEFKA 91

Query: 112 QFLGLNRRLRLPADAQKAPILPTN-DLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGAL 170
             LGL+        A K   L  +  +P   DWR  GAVT VKDQG+CG+CWSFSATGA+
Sbjct: 92  SRLGLSVSAPSVIMASKGQSLGGSVKVPDSVDWRKKGAVTNVKDQGSCGACWSFSATGAM 151

Query: 171 EGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREK 230
           EG + + TG+L+SLSEQ+L+DCD         S ++GCNGGLM+ AFE+++K  G++ EK
Sbjct: 152 EGINQIVTGDLISLSEQELIDCDK--------SYNAGCNGGLMDYAFEFVIKNHGIDTEK 203

Query: 231 DYPYTGTDGGSCKFDKSK-IAAAVSNFSVISSDEDQMAANLVKHGPLAVGI--NAVWMQT 287
           DYPY   D G+CK DK K     + +++ + S++++     V   P++VGI  +    Q 
Sbjct: 204 DYPYQERD-GTCKKDKLKQKVVTIDSYAGVKSNDEKALMEAVAAQPVSVGICGSERAFQL 262

Query: 288 YIGGV-SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKIC 346
           Y  G+ S P  C   LDH VLIVGYGS            YWI+KNSWG++WG +G+    
Sbjct: 263 YSRGIFSGP--CSTSLDHAVLIVGYGSQNGV-------DYWIVKNSWGKSWGMDGFMH-- 311

Query: 347 MGRN------VCGVDSMVSSVAAIH 365
           M RN      VCG++ + S     H
Sbjct: 312 MQRNTENSDGVCGINMLASYPIKTH 336


>gi|44844204|emb|CAF32698.1| cysteine proteinase [Leishmania infantum]
          Length = 443

 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 129/313 (41%), Positives = 171/313 (54%), Gaps = 34/313 (10%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           F  FK  + + Y T  E   R   F+ NL   +  Q  +P A  G+TKF DL+ +EF  +
Sbjct: 38  FEEFKRTYRRAYGTLAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 113 FLGLNRRLRLPADAQKA------PILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSA 166
           +L  N      A  Q A           + +P   DWR+ GAVT VK  GACGSCW+FSA
Sbjct: 98  YL--NGAAYFAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKXXGACGSCWAFSA 155

Query: 167 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK--AG 224
            G +E     +   LVSLSEQQLV CD +         D+GCNGGLM  AFE +L+   G
Sbjct: 156 VGNIESQWARAGHGLVSLSEQQLVSCDDK---------DNGCNGGLMLQAFEXLLRHMYG 206

Query: 225 GVEREKDYPYTGTDGGSCK-FDKSKI--AAAVSNFSVISSDEDQMAANLVKHGPLAVGIN 281
            V  EK YPYT  +G   +  + SK+   A +  + +I S+E  MAA L ++GP+A+ ++
Sbjct: 207 IVFTEKSYPYTSGNGDVAECLNSSKLVPGAQIDGYVMIPSNETVMAAWLAENGPIAIAVD 266

Query: 282 AVWMQTYIGGV--SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGE 339
           A    +Y  GV  SC    G  L+HGVL+VGY  +G         PYW+IKNSWGE+WGE
Sbjct: 267 ASSFMSYQSGVLTSCA---GDALNHGVLLVGYNKTGGV-------PYWVIKNSWGEDWGE 316

Query: 340 NGYYKICMGRNVC 352
            GY ++ MG N C
Sbjct: 317 KGYVRVVMGXNAC 329


>gi|167833701|gb|ACA02577.1| cathepsin [Spodoptera frugiperda MNPV]
          Length = 340

 Score =  209 bits (532), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 113/320 (35%), Positives = 182/320 (56%), Gaps = 23/320 (7%)

Query: 49  AEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSE 108
           A  +F  F ++++K Y +++E  YR+ +F+ N+    ++   + +AV+ + +F+D+T +E
Sbjct: 39  APLYFEKFIAQYNKQYKSEDEKKYRYNIFRHNIESINQKNSRNDSAVYKINRFADMTKNE 98

Query: 109 FRRQFLGLNRRLRLPADAQKAPIL---PTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFS 165
              +  GL     L A+  +  ++        P +FDWR    VT VKDQG CG+CW+F+
Sbjct: 99  IVIRHTGLASG-ELGANFCETVVVDGPAQRQRPANFDWRTLNKVTSVKDQGMCGACWAFA 157

Query: 166 ATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGG 225
             GALE  + +    L+ L+EQQLVDCD           D GC+GGL+++A+E I++ GG
Sbjct: 158 GLGALESQYAIKYDRLIDLAEQQLVDCDF---------VDMGCDGGLIHTAYEQIMRMGG 208

Query: 226 VEREKDYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVGINAVW 284
           VE+E DYPY   +   C     K AA V N +  +  +E+++   L   GP+A+ ++AV 
Sbjct: 209 VEQEFDYPYK-AERQPCALKPHKFAAGVRNCYRYVLMNEERLEDLLRYVGPIAIAVDAVD 267

Query: 285 MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYK 344
           +  Y GG+   +     L+H VL+VGYG            PYWIIKNSWG ++GE+GY +
Sbjct: 268 LTDYYGGI-VSFCKNNGLNHAVLLVGYGVE-------NNVPYWIIKNSWGSDYGEDGYVR 319

Query: 345 ICMGRNVCGVDSMVSSVAAI 364
           +  G N CG+ + ++S A +
Sbjct: 320 VRRGVNSCGMINELASSAQV 339


>gi|125860143|ref|YP_001036312.1| viral cathepsin [Spodoptera frugiperda MNPV]
 gi|120969288|gb|ABM45731.1| viral cathepsin [Spodoptera frugiperda MNPV]
 gi|319997353|gb|ADV91251.1| V-CATH [Spodoptera frugiperda MNPV]
 gi|384087478|gb|AFH58958.1| v-cath [Spodoptera frugiperda MNPV]
          Length = 339

 Score =  209 bits (532), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 113/320 (35%), Positives = 182/320 (56%), Gaps = 23/320 (7%)

Query: 49  AEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSE 108
           A  +F  F ++++K Y +++E  YR+ +F+ N+    ++   + +AV+ + +F+D+T +E
Sbjct: 38  APLYFEKFIAQYNKQYKSEDEKKYRYNIFRHNIESINQKNSRNDSAVYKINRFADMTKNE 97

Query: 109 FRRQFLGLNRRLRLPADAQKAPIL---PTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFS 165
              +  GL     L A+  +  ++        P +FDWR    VT VKDQG CG+CW+F+
Sbjct: 98  IVIRHTGLASG-ELGANFCETVVVDGPAQRQRPANFDWRTLNKVTSVKDQGMCGACWAFA 156

Query: 166 ATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGG 225
             GALE  + +    L+ L+EQQLVDCD           D GC+GGL+++A+E I++ GG
Sbjct: 157 GLGALESQYAIKYDRLIDLAEQQLVDCDF---------VDMGCDGGLIHTAYEQIMRMGG 207

Query: 226 VEREKDYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVGINAVW 284
           VE+E DYPY   +   C     K AA V N +  +  +E+++   L   GP+A+ ++AV 
Sbjct: 208 VEQEFDYPYK-AERQPCALKPHKFAAGVRNCYRYVLMNEERLEDLLRYVGPIAIAVDAVD 266

Query: 285 MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYK 344
           +  Y GG+   +     L+H VL+VGYG            PYWIIKNSWG ++GE+GY +
Sbjct: 267 LTDYYGGI-VSFCKNNGLNHAVLLVGYGVE-------NNVPYWIIKNSWGSDYGEDGYVR 318

Query: 345 ICMGRNVCGVDSMVSSVAAI 364
           +  G N CG+ + ++S A +
Sbjct: 319 VRRGVNSCGMINELASSAQV 338


>gi|14349349|gb|AAC38833.2| cysteine protease [Leishmania chagasi]
          Length = 353

 Score =  209 bits (532), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 122/311 (39%), Positives = 167/311 (53%), Gaps = 25/311 (8%)

Query: 49  AEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVT-KFSDLTPS 107
           A  H+  FK +  K +    E   RF  FK N++ A      +P A + V+ KF+DLTP 
Sbjct: 37  ASAHYGRFKKRHGKPFGEDAEEGRRFNAFKQNMQTAYFLNAHNPHAHYDVSGKFADLTPQ 96

Query: 108 EFRRQFLGLNRRLRLPADAQKAPIL--PTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFS 165
           EF + +L  N   R   D ++   +           DWR+ G VT VK+QG CGSCW+F+
Sbjct: 97  EFAKLYLNPNYYARHGKDYKEHVHVDDSVRSGVMSVDWREKGVVTPVKNQGMCGSCWAFA 156

Query: 166 ATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK--A 223
            TG +EG   L    LVSLSEQ LV CD         + D GCNGGLM  A ++I+    
Sbjct: 157 TTGNIEGQWALKNHSLVSLSEQVLVSCD---------NIDDGCNGGLMQQAMQWIINDHN 207

Query: 224 GGVEREKDYPYTGTDGGSCK-FDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA 282
           G V  E  YPYT   G      D   + A ++ +  +  DE+++AA + K+GP+AV ++A
Sbjct: 208 GTVPTEDSYPYTSAGGTRPPCHDNGTVGAKIAGYMSLPHDEEEIAAYVGKNGPVAVAVDA 267

Query: 283 VWMQTYIGGVSCPYIC-GKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENG 341
              Q Y GGV    +C G  L+HGVL+VG+        R  + PYWI+KNSWG +WGE G
Sbjct: 268 TTWQLYFGGVVT--LCFGLSLNHGVLVVGFN-------RQAKPPYWIVKNSWGSSWGEKG 318

Query: 342 YYKICMGRNVC 352
           Y ++ MG N C
Sbjct: 319 YIRLAMGSNQC 329


>gi|194352750|emb|CAQ00103.1| papain-like cysteine proteinase [Hordeum vulgare subsp. vulgare]
 gi|326514262|dbj|BAJ92281.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326519402|dbj|BAJ96700.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326524351|dbj|BAK00559.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326531998|dbj|BAK01375.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 356

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 141/370 (38%), Positives = 199/370 (53%), Gaps = 41/370 (11%)

Query: 4   LILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFK---SKF 60
           + LS  LLLL    + + VA N D +++          SE+ L + E    LF+   +K 
Sbjct: 8   MKLSGALLLL---CVGACVARNSDFSIVGY--------SEEDLSSNERLVELFEKWLAKH 56

Query: 61  SKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRR- 119
            K YA+ EE  +RF VFK NL+   +      +   G+ +F+DLT  EF+  +LGL+   
Sbjct: 57  QKAYASFEEKLHRFEVFKDNLKHIDKINREVTSYWLGLNEFADLTHDEFKAAYLGLDAAP 116

Query: 120 -LRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLST 178
             R  + + +   +  +DLP   DWR  GAVT VK+QG CGSCW+FS   A+EG + + T
Sbjct: 117 ARRGSSRSFRYEDVSASDLPKSVDWRKKGAVTEVKNQGQCGSCWAFSTVAAVEGINAIVT 176

Query: 179 GELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTD 238
           G L +LSEQ+L+DC        S   +SGCNGGLM+ AF YI  +GG+  E+ YPY   +
Sbjct: 177 GNLTALSEQELIDC--------SVDGNSGCNGGLMDYAFSYIASSGGLHTEEAYPYL-ME 227

Query: 239 GGSCKFDKSKIAAAV--SNFSVISSDEDQMAANLVKHGPLAVGINAV--WMQTYIGGV-S 293
            GSC   K   + AV  S +  + ++++Q     + H P++V I A     Q Y GGV  
Sbjct: 228 EGSCGDGKKAESEAVTISGYEDVPANDEQALIKALAHQPVSVAIEASGRHFQFYSGGVFD 287

Query: 294 CPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKI----CMGR 349
            P  CG  LDHGV  VGYGS      + K   Y I++NSWG  WGE GY ++      G 
Sbjct: 288 GP--CGAQLDHGVAAVGYGSD-----KGKGHDYIIVRNSWGAQWGEKGYIRMKRGTSNGE 340

Query: 350 NVCGVDSMVS 359
            +CG++ M S
Sbjct: 341 GLCGINKMAS 350


>gi|393717160|gb|AFN21082.1| V-Cath [Bombyx mori NPV]
 gi|393717442|gb|AFN21362.1| V-Cath [Bombyx mori NPV]
          Length = 323

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 117/325 (36%), Positives = 181/325 (55%), Gaps = 29/325 (8%)

Query: 47  LNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTP 106
           L A ++F  F  +F+K Y+++ E   RF++F+ NL     +   D +A + + KFSDL+ 
Sbjct: 22  LKAPNYFEEFVHRFNKNYSSEVEKLRRFKIFQHNLNEIINKNQND-SAKYEINKFSDLSK 80

Query: 107 SEFRRQFLGLNRRLRLPADAQ---KAPIL--PTNDLPTDFDWRDHGAVTGVKDQGACGSC 161
            E   ++ GL+    LP   Q   K  +L  P    P +FDWR    VT VK+QG CG+C
Sbjct: 81  DETIAKYTGLS----LPTQTQNFCKVILLDQPPGKGPLEFDWRRLNKVTSVKNQGMCGAC 136

Query: 162 WSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYIL 221
           W+F+  G+LE    +   EL++LSEQQ++DCD           D+GCNGGL+++AFE I+
Sbjct: 137 WAFATLGSLESQFAIKHNELINLSEQQMIDCDF---------VDAGCNGGLLHTAFEAII 187

Query: 222 KAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVGI 280
           K GGV+ E DYPY   D  +C+ + +K    V + +  I   E+++   L   GP+ + I
Sbjct: 188 KMGGVQLESDYPYEA-DNNNCRMNSNKFLVQVKDCYRYIIVYEEKLKDLLRLVGPIPMAI 246

Query: 281 NAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGEN 340
           +A  +  Y  G+   Y     L+H VL+VGYG            PYW  KN+WG +WGE+
Sbjct: 247 DAADIVNYKQGI-IKYCFDSGLNHAVLLVGYGVEN-------NIPYWTFKNTWGTDWGED 298

Query: 341 GYYKICMGRNVCGVDSMVSSVAAIH 365
           G++++    N CG+ + ++S A I+
Sbjct: 299 GFFRVQQNINACGMRNELASTAVIY 323


>gi|288548566|gb|ADC52431.1| cathepsin L2 cysteine protease [Pinctada fucata]
          Length = 330

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 125/323 (38%), Positives = 177/323 (54%), Gaps = 33/323 (10%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH----GVTKFSDLT 105
           ++ +++FK +++K Y  +EE   R  V+++NL       L      H    G+ ++ D+T
Sbjct: 24  DNEWNIFKKQYNKLYQNEEEARRRL-VWESNLDFITLHNLAADRGEHTFWVGMNEYGDMT 82

Query: 106 PSEFRRQFLGLNRRLRLPADAQKAPI-LPTN---DLPTDFDWRDHGAVTGVKDQGACGSC 161
             EF +   G     R+      AP+ +P N   DLP   DWR  G VT +K+QG CGSC
Sbjct: 83  NEEFTKTMNGY----RMRNKTSNAPVFMPPNNMGDLPDTVDWRPKGYVTPIKNQGQCGSC 138

Query: 162 WSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYIL 221
           WSFSATG+LEG  F  TG+LVSLSEQ LVDC  +         + GC GGLM+ AF YI 
Sbjct: 139 WSFSATGSLEGQTFKKTGKLVSLSEQNLVDCSKK-------QGNHGCEGGLMDDAFTYIK 191

Query: 222 KAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVGI 280
              G++ E  YPY   D G C+F  + + A  + F  + + DE+ +   +   GP++V I
Sbjct: 192 ANNGIDTEASYPYKARD-GKCEFKSADVGATDTGFVDIKTKDEEALKQAVATVGPISVAI 250

Query: 281 NAVWM--QTYIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENW 337
           +A  M  Q Y  GV   + C +  LDHGVL VGYG+          K YW++KNSWGE+W
Sbjct: 251 DASHMSFQLYRTGVYHDWFCSQTKLDHGVLAVGYGTE-------DSKDYWLVKNSWGESW 303

Query: 338 GENGYYKICMG-RNVCGVDSMVS 359
           G+ GY ++    RN CG+ +  S
Sbjct: 304 GQKGYIQMSRNRRNNCGIATSAS 326


>gi|402770517|gb|AFQ98393.1| cathepsin L [Rhipicephalus microplus]
          Length = 332

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 135/321 (42%), Positives = 168/321 (52%), Gaps = 31/321 (9%)

Query: 52  HFSLFKSKFSKTYATQEEHDYRFRVFKAN-LRRAKRRQLLDPTAVH---GVTKFSDLTPS 107
            +  FK+   KTY +  E   RF++F  N L  AK         V    G+ +F DL   
Sbjct: 26  QWEAFKTTHKKTYQSHMEELLRFKIFTENSLIIAKHNAKYAKGLVSYKLGMNQFGDLLAH 85

Query: 108 EFRRQFLGLNRRLRLPADAQKAPILPTND--LPTDFDWRDHGAVTGVKDQGACGSCWSFS 165
           EF R F G +   R    +   P    ND  LP   DWR  GAVT VKDQG CGSCW+FS
Sbjct: 86  EFARIFNG-HHGTRKTGGSSFLPPANVNDSSLPKVVDWRKKGAVTPVKDQGQCGSCWAFS 144

Query: 166 ATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGG 225
           ATG+LEG HFL  GELVSLSEQ LVDC            ++GC GGLM  AF+YI    G
Sbjct: 145 ATGSLEGQHFLKNGELVSLSEQNLVDCSQSFG-------NNGCEGGLMEDAFKYIKANDG 197

Query: 226 VEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISS-DEDQMAANLVKHGPLAVGINAVW 284
           ++ EK YPY   D G C+F K  + A  + +  I +  E  +   +   GP++V I+A  
Sbjct: 198 IDTEKSYPYKAVD-GECRFKKEDVGATDTGYVEIKAGSEVDLKKAVATVGPISVAIDASH 256

Query: 285 --MQTYIGGV-SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENG 341
              Q Y  GV   P    + LDHGVL+VGYG  G        K YW++KNSW E+WG+ G
Sbjct: 257 SSFQLYSEGVYDEPECSSEDLDHGVLVVGYGVKG-------GKKYWLVKNSWAESWGDQG 309

Query: 342 YYKICMGR---NVCGVDSMVS 359
           Y  I M R   N CG+ S  S
Sbjct: 310 Y--ILMSRDNNNQCGIASQAS 328


>gi|9630927|ref|NP_047524.1| Cystein Protease [Bombyx mori NPV]
 gi|1168798|sp|P41721.1|CATV_NPVBM RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|540066|gb|AAB49542.1| cysteine protease [Bombyx mori NPV]
 gi|3745946|gb|AAC63793.1| Cystein Protease [Bombyx mori NPV]
          Length = 323

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 117/325 (36%), Positives = 181/325 (55%), Gaps = 29/325 (8%)

Query: 47  LNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTP 106
           L A ++F  F  +F+K Y+++ E   RF++F+ NL     +   D +A + + KFSDL+ 
Sbjct: 22  LKAPNYFEEFVHRFNKNYSSEVEKLRRFKIFQHNLNEIINKNQND-SAKYEINKFSDLSK 80

Query: 107 SEFRRQFLGLNRRLRLPADAQ---KAPIL--PTNDLPTDFDWRDHGAVTGVKDQGACGSC 161
            E   ++ GL+    LP   Q   K  +L  P    P +FDWR    VT VK+QG CG+C
Sbjct: 81  DETIAKYTGLS----LPTQTQNFCKVILLDQPPGKGPLEFDWRRLNKVTSVKNQGMCGAC 136

Query: 162 WSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYIL 221
           W+F+  G+LE    +   EL++LSEQQ++DCD           D+GCNGGL+++AFE I+
Sbjct: 137 WAFATLGSLESQFAIKHNELINLSEQQMIDCDF---------VDAGCNGGLLHTAFEAII 187

Query: 222 KAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVGI 280
           K GGV+ E DYPY   D  +C+ + +K    V + +  I   E+++   L   GP+ + I
Sbjct: 188 KMGGVQLESDYPYEA-DNNNCRMNSNKFLVQVKDCYRYIIVYEEKLKDLLPLVGPIPMAI 246

Query: 281 NAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGEN 340
           +A  +  Y  G+   Y     L+H VL+VGYG            PYW  KN+WG +WGE+
Sbjct: 247 DAADIVNYKQGI-IKYCFDSGLNHAVLLVGYGVEN-------NIPYWTFKNTWGTDWGED 298

Query: 341 GYYKICMGRNVCGVDSMVSSVAAIH 365
           G++++    N CG+ + ++S A I+
Sbjct: 299 GFFRVQQNINACGMRNELASTAVIY 323


>gi|168063167|ref|XP_001783545.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162664932|gb|EDQ51634.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 461

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 123/302 (40%), Positives = 168/302 (55%), Gaps = 21/302 (6%)

Query: 52  HFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRR 111
            F+ +  K  K Y   E+  +RF V+K NL   +  +  + T   G+TKF+DLT  EFRR
Sbjct: 53  QFAAWAHKHGKAYHDAEQCLHRFAVWKDNLAYIRHSET-NRTYSLGLTKFADLTNEEFRR 111

Query: 112 QFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALE 171
            + G        A  +       ++ P   DWR +GAVT VKDQG+CGSCW+FSA G++E
Sbjct: 112 MYTGTRIDRSRRAKRRTGFRYADSEAPESVDWRKNGAVTSVKDQGSCGSCWAFSAVGSVE 171

Query: 172 GAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKD 231
           G + +  GE VSLSEQ+LVDCD E         + GCNGGLM+ AF++I++ GG++ EKD
Sbjct: 172 GINAIRNGEAVSLSEQELVDCDLE--------YNQGCNGGLMDYAFDFIIQNGGIDTEKD 223

Query: 232 YPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYI 289
           YPY G DG      K+     +  +  +  ++++     V   P++V I A     Q Y 
Sbjct: 224 YPYKGFDGRCDNSKKNAHVVTIDGYEDVPENDEEALKKAVAGQPVSVAIEAGGRDFQLYA 283

Query: 290 GGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR 349
            GV     CG  LDHGVL VGYG+            YWI+KNSWGE WGE+GY +  M R
Sbjct: 284 QGVF-SGECGTDLDHGVLAVGYGTEDGV-------DYWIVKNSWGEYWGESGYLR--MKR 333

Query: 350 NV 351
           N+
Sbjct: 334 NM 335


>gi|15824704|gb|AAL09448.1| cysteine protease [Leishmania donovani]
          Length = 353

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 122/311 (39%), Positives = 167/311 (53%), Gaps = 25/311 (8%)

Query: 49  AEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVT-KFSDLTPS 107
           A  H+  FK +  K +    E   RF  FK N++ A      +P A + V+ KF+DLTP 
Sbjct: 37  ASAHYGRFKKRHGKPFGEDAEEGRRFNAFKQNMQTAYFLNAHNPHAHYDVSGKFADLTPQ 96

Query: 108 EFRRQFLGLNRRLRLPADAQKAPIL--PTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFS 165
           EF + +L  N   R   D ++   +           DWR+ G VT VK+QG CGSCW+F+
Sbjct: 97  EFAKLYLNPNYYARHGKDYKEHVHVDDSVRSGVMSVDWREKGVVTPVKNQGMCGSCWAFA 156

Query: 166 ATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK--A 223
            TG +EG   L    LVSLSEQ LV CD         + D GCNGGLM  A ++I+    
Sbjct: 157 TTGNIEGQWALKNHSLVSLSEQVLVSCD---------NIDDGCNGGLMEQAMQWIINDHN 207

Query: 224 GGVEREKDYPYTGTDGGSCK-FDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA 282
           G V  E  YPYT   G      D   + A ++ +  +  DE+++AA + K+GP+AV ++A
Sbjct: 208 GTVPTEDSYPYTSAGGTRPPCHDNGTVGAKIAGYMSLPHDEEEIAAYVGKNGPVAVAVDA 267

Query: 283 VWMQTYIGGVSCPYIC-GKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENG 341
              Q Y GGV    +C G  L+HGVL+VG+        R  + PYWI+KNSWG +WGE G
Sbjct: 268 TTWQLYFGGVVT--LCFGLSLNHGVLVVGFN-------RQAKPPYWIVKNSWGSSWGEKG 318

Query: 342 YYKICMGRNVC 352
           Y ++ MG N C
Sbjct: 319 YIRLAMGSNQC 329


>gi|402770511|gb|AFQ98390.1| cathepsin L [Rhipicephalus microplus]
 gi|402770513|gb|AFQ98391.1| cathepsin L [Rhipicephalus microplus]
          Length = 332

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 135/321 (42%), Positives = 168/321 (52%), Gaps = 31/321 (9%)

Query: 52  HFSLFKSKFSKTYATQEEHDYRFRVFKAN-LRRAKRRQLLDPTAVH---GVTKFSDLTPS 107
            +  FK+   KTY +  E   RF++F  N L  AK         V    G+ +F DL   
Sbjct: 26  QWEAFKTTHKKTYQSHMEELLRFKIFTENSLIIAKHNAKYAKGLVSYKLGMNQFGDLLAH 85

Query: 108 EFRRQFLGLNRRLRLPADAQKAPILPTND--LPTDFDWRDHGAVTGVKDQGACGSCWSFS 165
           EF R F G +   R    +   P    ND  LP   DWR  GAVT VKDQG CGSCW+FS
Sbjct: 86  EFARIFNG-HHGTRKTGGSSFLPPANVNDSSLPKVVDWRKKGAVTPVKDQGQCGSCWAFS 144

Query: 166 ATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGG 225
           ATG+LEG HFL  GELVSLSEQ LVDC            ++GC GGLM  AF+YI    G
Sbjct: 145 ATGSLEGQHFLKNGELVSLSEQNLVDCSQSFG-------NNGCEGGLMEDAFKYIKANDG 197

Query: 226 VEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISS-DEDQMAANLVKHGPLAVGINAVW 284
           ++ EK YPY   D G C+F K  + A  + +  I +  E  +   +   GP++V I+A  
Sbjct: 198 IDTEKSYPYEAVD-GECRFKKEDVGATDTGYVEIKAGSEVDLKKAVATVGPISVAIDASH 256

Query: 285 --MQTYIGGV-SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENG 341
              Q Y  GV   P    + LDHGVL+VGYG  G        K YW++KNSW E+WG+ G
Sbjct: 257 SSFQLYSEGVYDEPECSSEDLDHGVLVVGYGVKG-------GKKYWLVKNSWAESWGDQG 309

Query: 342 YYKICMGR---NVCGVDSMVS 359
           Y  I M R   N CG+ S  S
Sbjct: 310 Y--ILMSRDNNNQCGIASQAS 328


>gi|356560855|ref|XP_003548702.1| PREDICTED: P34 probable thiol protease-like [Glycine max]
          Length = 357

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 125/323 (38%), Positives = 181/323 (56%), Gaps = 45/323 (13%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLR-----RAKRRQLLDPTA-VHGVTKFSDLTP 106
           F L++ +    Y   +E   RF +F +NL       AKR     P+  + G+  F+D +P
Sbjct: 52  FQLWRKEHGLVYKDLKEMAKRFEIFLSNLNYIIEFNAKRS---SPSGYLLGLNNFADWSP 108

Query: 107 SEFRRQFLGLNRRLRLPADAQ---KAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWS 163
           SEF+  +L     L +P D+      P+L +   P   DWR+  AVT +K+QG+CGSCW+
Sbjct: 109 SEFQEIYL---HSLDMPTDSAPKLNGPLL-SCIAPASLDWRNKVAVTAIKNQGSCGSCWA 164

Query: 164 FSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA 223
           FSA GA+EG H ++TGEL+SLSEQ+LV+CD             GCNGG +N AF++++  
Sbjct: 165 FSAAGAIEGIHAITTGELISLSEQELVNCDR---------VSKGCNGGWVNKAFDWVISN 215

Query: 224 GGVEREKDYPYTGTDGGSCKFDKS-KIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA 282
           GG+  E +YPYTG DGG+C  DK   I A +  +  +   ++ +  ++VK  P+++ +NA
Sbjct: 216 GGITLEAEYPYTGKDGGNCNSDKQVPIKATIDGYEQVEQSDNGLLCSIVKQ-PISICLNA 274

Query: 283 VWMQTYIGGVSCPYIC---GKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGE 339
              Q Y  G+     C    KY +H VLIVGY SS         + YWI+KNSWG  WG 
Sbjct: 275 TDFQLYESGIFDGQQCSSSSKYTNHCVLIVGYDSS-------NGEDYWIVKNSWGTKWGI 327

Query: 340 NGYYKICMGRN------VCGVDS 356
           NGY  I + RN      VCG+++
Sbjct: 328 NGY--IWIKRNTGLPYGVCGMNA 348


>gi|297843430|ref|XP_002889596.1| hypothetical protein ARALYDRAFT_887827 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297335438|gb|EFH65855.1| hypothetical protein ARALYDRAFT_887827 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 343

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 119/317 (37%), Positives = 173/317 (54%), Gaps = 24/317 (7%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEF 109
           +  F  +    SK Y  ++E   RF ++++N++       L         +F+D+T SEF
Sbjct: 40  KQRFEKWLKTHSKLYGGRDEWMLRFGIYQSNVQLIDYINSLHLPFKLTDNRFADMTNSEF 99

Query: 110 RRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGA 169
           +  FLGLN         Q+    P  ++P   DWR  GAVT +++QG CG CW+FSA  A
Sbjct: 100 KAHFLGLNTSSLRLHKKQRPVCDPAGNVPDAVDWRTQGAVTPIRNQGKCGGCWAFSAVAA 159

Query: 170 LEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVERE 229
           +EG + + TG LVSLSEQQL+DCD        G+ + GC+GGLM +AFE+I   GG+  E
Sbjct: 160 IEGINKIKTGNLVSLSEQQLIDCD-------VGTYNKGCSGGLMETAFEFIKSNGGLTTE 212

Query: 230 KDYPYTGTDGGSCKFDKSK-IAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQ 286
            DYPYTG + G+C  +K+K     +  +  ++ +E  +     +  P++VGI+A     Q
Sbjct: 213 TDYPYTGIE-GTCDQEKAKNKVVTIQGYQKVAQNEASLQIAAAQQ-PVSVGIDAGGFIFQ 270

Query: 287 TYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKIC 346
            Y  GV   Y CG  L+HGV +VGYG  G       ++ YWI+KNSWG  WGE GY ++ 
Sbjct: 271 LYSSGVFTSY-CGTNLNHGVTVVGYGVEG-------DQKYWIVKNSWGTGWGEEGYIRME 322

Query: 347 MG----RNVCGVDSMVS 359
            G       CG+  + S
Sbjct: 323 RGISEDTGKCGIAMLAS 339


>gi|398014254|ref|XP_003860318.1| cysteine peptidase A (CBA) [Leishmania donovani]
 gi|13518086|gb|AAK27384.1| cysteine proteinase-like protein [Leishmania donovani]
 gi|322498538|emb|CBZ33611.1| cysteine peptidase A (CBA) [Leishmania donovani]
          Length = 354

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 122/311 (39%), Positives = 167/311 (53%), Gaps = 25/311 (8%)

Query: 49  AEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVT-KFSDLTPS 107
           A  H+  FK +  K +    E   RF  FK N++ A      +P A + V+ KF+DLTP 
Sbjct: 38  ASAHYGRFKKRHGKPFGEDAEEGRRFNAFKQNMQTAYFLNAHNPHAHYDVSGKFADLTPQ 97

Query: 108 EFRRQFLGLNRRLRLPADAQKAPIL--PTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFS 165
           EF + +L  N   R   D ++   +           DWR+ G VT VK+QG CGSCW+F+
Sbjct: 98  EFAKLYLNPNYYARHGKDYKEHVHVDDSVRSGVMSVDWREKGVVTPVKNQGMCGSCWAFA 157

Query: 166 ATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK--A 223
            TG +EG   L    LVSLSEQ LV CD         + D GCNGGLM  A ++I+    
Sbjct: 158 TTGNIEGQWALKNHSLVSLSEQVLVSCD---------NIDDGCNGGLMEQAMQWIINDHN 208

Query: 224 GGVEREKDYPYTGTDGGSCK-FDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA 282
           G V  E  YPYT   G      D   + A ++ +  +  DE+++AA + K+GP+AV ++A
Sbjct: 209 GTVPTEDSYPYTSAGGTRPPCHDNGTVGAKIAGYMSLPHDEEEIAAYVGKNGPVAVAVDA 268

Query: 283 VWMQTYIGGVSCPYIC-GKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENG 341
              Q Y GGV    +C G  L+HGVL+VG+        R  + PYWI+KNSWG +WGE G
Sbjct: 269 TTWQLYFGGVVT--LCFGLSLNHGVLVVGFN-------RQAKPPYWIVKNSWGSSWGEKG 319

Query: 342 YYKICMGRNVC 352
           Y ++ MG N C
Sbjct: 320 YIRLAMGSNQC 330


>gi|18394919|ref|NP_564126.1| Xylem cysteine proteinase 2 [Arabidopsis thaliana]
 gi|71153409|sp|Q9LM66.2|XCP2_ARATH RecName: Full=Xylem cysteine proteinase 2; Short=AtXCP2; Flags:
           Precursor
 gi|4836904|gb|AAD30607.1|AC007369_17 Putative cysteine proteinase [Arabidopsis thaliana]
 gi|6708183|gb|AAF25832.1|AF191028_1 papain-type cysteine endopeptidase XCP2 [Arabidopsis thaliana]
 gi|28466959|gb|AAO44088.1| At1g20850 [Arabidopsis thaliana]
 gi|110743795|dbj|BAE99733.1| putative cysteine proteinase [Arabidopsis thaliana]
 gi|332191910|gb|AEE30031.1| Xylem cysteine proteinase 2 [Arabidopsis thaliana]
          Length = 356

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 137/345 (39%), Positives = 186/345 (53%), Gaps = 37/345 (10%)

Query: 28  DAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRR 87
           D  I    P D E S D L+     F  + S F K Y T EE   RF VFK NL+     
Sbjct: 30  DYSIVGYSPEDLE-SHDKLIEL---FENWISNFEKAYETVEEKFLRFEVFKDNLKHIDET 85

Query: 88  QLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDL---PTDFDWR 144
                +   G+ +F+DL+  EF++ +LGL   +    + +        D+   P   DWR
Sbjct: 86  NKKGKSYWLGLNEFADLSHEEFKKMYLGLKTDIVRRDEERSYAEFAYRDVEAVPKSVDWR 145

Query: 145 DHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSC 204
             GAV  VK+QG+CGSCW+FS   A+EG + + TG L +LSEQ+L+DCD         + 
Sbjct: 146 KKGAVAEVKNQGSCGSCWAFSTVAAVEGINKIVTGNLTTLSEQELIDCDT--------TY 197

Query: 205 DSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKF--DKSKIAAAVSNFSVISSD 262
           ++GCNGGLM+ AFEYI+K GG+ +E+DYPY+  + G+C+   D+S+      +  V ++D
Sbjct: 198 NNGCNGGLMDYAFEYIVKNGGLRKEEDYPYS-MEEGTCEMQKDESETVTINGHQDVPTND 256

Query: 263 EDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIR 320
           E  +   L  H PL+V I+A     Q Y GGV     CG  LDHGV  VGYGSS      
Sbjct: 257 EKSLLKALA-HQPLSVAIDASGREFQFYSGGV-FDGRCGVDLDHGVAAVGYGSS------ 308

Query: 321 FKEKPYWIIKNSWGENWGENGYYKICMGRN------VCGVDSMVS 359
            K   Y I+KNSWG  WGE GY  I + RN      +CG++ M S
Sbjct: 309 -KGSDYIIVKNSWGPKWGEKGY--IRLKRNTGKPEGLCGINKMAS 350


>gi|402770515|gb|AFQ98392.1| cathepsin L [Rhipicephalus microplus]
          Length = 332

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 135/321 (42%), Positives = 168/321 (52%), Gaps = 31/321 (9%)

Query: 52  HFSLFKSKFSKTYATQEEHDYRFRVFKAN-LRRAKRRQLLDPTAVH---GVTKFSDLTPS 107
            +  FK+   KTY +  E   RF++F  N L  AK         V    G+ +F DL   
Sbjct: 26  QWEAFKTTHKKTYQSHMEELLRFKIFTENSLIIAKHNAKYAKGLVSYKLGMNQFGDLLAH 85

Query: 108 EFRRQFLGLNRRLRLPADAQKAPILPTND--LPTDFDWRDHGAVTGVKDQGACGSCWSFS 165
           EF R F G +   R    +   P    ND  LP   DWR  GAVT VKDQG CGSCW+FS
Sbjct: 86  EFARIFNG-HHGTRKTGGSSFLPPANVNDSSLPKVVDWRKKGAVTPVKDQGQCGSCWAFS 144

Query: 166 ATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGG 225
           ATG+LEG HFL  GELVSLSEQ LVDC            ++GC GGLM  AF+YI    G
Sbjct: 145 ATGSLEGQHFLKNGELVSLSEQNLVDCSQSFG-------NNGCEGGLMEDAFKYIKANDG 197

Query: 226 VEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISS-DEDQMAANLVKHGPLAVGINAVW 284
           ++ EK YPY   D G C+F K  + A  + +  I +  E  +   +   GP++V I+A  
Sbjct: 198 IDTEKSYPYEAVD-GECRFKKEDVGATDTGYVEIKAGSEVDLKKAVATVGPISVAIDASH 256

Query: 285 --MQTYIGGV-SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENG 341
              Q Y  GV   P    + LDHGVL+VGYG  G        K YW++KNSW E+WG+ G
Sbjct: 257 SSFQLYSEGVYDEPECSSEDLDHGVLVVGYGVKG-------GKKYWLVKNSWAESWGDQG 309

Query: 342 YYKICMGR---NVCGVDSMVS 359
           Y  I M R   N CG+ S  S
Sbjct: 310 Y--ILMSRDNNNQCGIASQAS 328


>gi|157093563|gb|ABV22436.1| cysteine proteinase [Oxyrrhis marina]
          Length = 329

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 130/321 (40%), Positives = 171/321 (53%), Gaps = 24/321 (7%)

Query: 56  FKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLG 115
           FK+KF ++Y  +EE   R  VF  N++          T   GV +F+DLT  EF + ++G
Sbjct: 22  FKAKFGESYNGEEEEAERKGVFAQNVQLINEENSKGHTYTLGVNQFADLTVEEFSKTYMG 81

Query: 116 LNRRLRLPADAQKAP--ILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGA 173
             +  +   DA      +     LPT  DW   GAVT VK+QG CGSCWSFS TG+LEGA
Sbjct: 82  FKKPAQKYGDAAYLGRHVYNGEALPTSVDWSSQGAVTPVKNQGQCGSCWSFSTTGSLEGA 141

Query: 174 HFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYP 233
           + +STG+LVSLSEQQ VDC            + GCNGGLM+SAF+Y  +A  +  E+ YP
Sbjct: 142 NEISTGKLVSLSEQQFVDCAGTYG-------NQGCNGGLMDSAFKYA-EANALCTEQSYP 193

Query: 234 YTGTDGGSCKFDKSKIAAA---VSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTY 288
           Y GTD GSC+        A   VS +  +SSD +Q   + V   P+++ I A     Q Y
Sbjct: 194 YKGTD-GSCQASSCSTGLAKGSVSGYKDVSSDSEQDMMSAVAQQPVSIAIEADKSVFQLY 252

Query: 289 IGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMG 348
            GGV     CG  LDHGVL VGYG+            YW +KNSWG  WG +GY  +  G
Sbjct: 253 SGGV-LTGACGASLDHGVLAVGYGT-------LSGTDYWKVKNSWGSTWGMSGYVLLQRG 304

Query: 349 RNVCGVDSMVSSVAAIHTTSS 369
           +   G   ++S  +    T S
Sbjct: 305 KGGSGECGLLSEPSYPQVTGS 325


>gi|146084829|ref|XP_001465113.1| cysteine peptidase A (CPA) [Leishmania infantum JPCM5]
 gi|134069209|emb|CAM67356.1| cysteine peptidase A (CPA) [Leishmania infantum JPCM5]
          Length = 354

 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 123/317 (38%), Positives = 169/317 (53%), Gaps = 25/317 (7%)

Query: 49  AEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVT-KFSDLTPS 107
           A  H+  FK +  K +    E   RF  FK N++ A      +P A + V+ KF+DLTP 
Sbjct: 38  ASAHYGRFKKRHGKPFGEDAEEGRRFNAFKQNMQTAYFLNAHNPHAHYDVSGKFADLTPQ 97

Query: 108 EFRRQFLGLNRRLRLPADAQKAPIL--PTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFS 165
           EF + +L  N   R   D ++   +           DWR+ G VT VK+QG CGSCW+F+
Sbjct: 98  EFAKLYLNPNYYARHGKDYKEHVHVDDSVRSGVMSVDWREKGVVTPVKNQGMCGSCWAFA 157

Query: 166 ATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK--A 223
            TG +EG   L    LVSLSEQ LV CD         + D GCNGGLM  A ++I+    
Sbjct: 158 TTGNIEGQWALKNHSLVSLSEQVLVSCD---------NIDDGCNGGLMQQAMQWIINDHN 208

Query: 224 GGVEREKDYPYTGTDGGSCK-FDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA 282
           G V  E  YPYT   G      D   + A +  +  +  DE+++AA + K+GP+AV ++A
Sbjct: 209 GTVPTEDSYPYTSAGGTRPPCHDNGTVGAKIKGYMSLPHDEEEIAAYVGKNGPVAVAVDA 268

Query: 283 VWMQTYIGGVSCPYIC-GKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENG 341
              Q Y GGV    +C G  L+HGVL+VG+        R  + PYWI+KNSWG +WGE G
Sbjct: 269 TTWQLYFGGVVT--LCFGLSLNHGVLVVGFN-------RQAKPPYWIVKNSWGSSWGEKG 319

Query: 342 YYKICMGRNVCGVDSMV 358
           Y ++ MG N C + + V
Sbjct: 320 YIRLAMGSNQCLLKNYV 336


>gi|162459393|ref|NP_001105993.1| cysteine protease component of protease-inhibitor complex precursor
           [Zea mays]
 gi|6682829|dbj|BAA88898.1| cysteine protease component of protease-inhibitor complex [Zea
           mays]
          Length = 465

 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 126/327 (38%), Positives = 179/327 (54%), Gaps = 34/327 (10%)

Query: 35  VPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTA 94
           + S GE+S++    A   ++ + +   +TY    E + R++VF+ NLR            
Sbjct: 29  IVSYGERSDEE---ARRMYAEWMAAHGRTYNAVGEEERRYQVFRDNLRYIDAHNAAADAG 85

Query: 95  VH----GVTKFSDLTPSEFRRQFLGL----NRRLRLPADAQKAPILPTNDLPTDFDWRDH 146
           VH    G+ +F+DLT  E+R  +LG      R  +L A    A      DLP   DWR  
Sbjct: 86  VHSFRLGLNRFADLTNDEYRATYLGARTRPQRERKLGARYHAAD---NEDLPESVDWRAK 142

Query: 147 GAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDS 206
           GAV  VKDQG+ GSCW+FS   A+EG + + TG+L+SLSEQ+LVDCD         S + 
Sbjct: 143 GAVAEVKDQGSYGSCWAFSTIAAVEGINQIVTGDLISLSEQELVDCDT--------SYNQ 194

Query: 207 GCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQM 266
           GCNGGLM+ AFE+I+  GG++ EKDYPY GTDG      K+     + ++  + +++++ 
Sbjct: 195 GCNGGLMDYAFEFIINNGGIDTEKDYPYKGTDGRCDVNRKNAKVVTIDSYEDVPANDEKS 254

Query: 267 AANLVKHGPLAVGINA--VWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEK 324
               V + P++V I A     Q Y  G+     CG  LDHGV  VGYG+          K
Sbjct: 255 LQKAVANQPVSVAIEAAGTQFQLYSSGIFTG-SCGTALDHGVTAVGYGTE-------NGK 306

Query: 325 PYWIIKNSWGENWGENGYYKICMGRNV 351
            YWI+KNSWG +WGE+GY +  M RN+
Sbjct: 307 DYWIVKNSWGSSWGESGYVR--MERNI 331


>gi|440793751|gb|ELR14926.1| Cysteine proteinase 5, putative [Acanthamoeba castellanii str.
           Neff]
          Length = 326

 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 135/359 (37%), Positives = 193/359 (53%), Gaps = 46/359 (12%)

Query: 7   SSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYAT 66
           ++LL L ++  +AS  AV+ D        P  G             F+ +  +  K+YA 
Sbjct: 4   TTLLALCVALFVASTFAVSHD--------PLTGV------------FADWMQEHQKSYAN 43

Query: 67  QEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPAD- 125
            EE  YR+ V++ N    +     + +    + KF DLT +EF + F GL+    + AD 
Sbjct: 44  -EEFVYRWNVWRENYLYIEAHNHQNKSFHLAMNKFGDLTNAEFNKLFKGLS----ITADQ 98

Query: 126 -AQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSL 184
             Q++ I P   LP DFDWR  GAVT VK+QG CGSCWSFS TG+ EGA+FL  G L SL
Sbjct: 99  AKQESDIAPAPGLPADFDWRQKGAVTHVKNQGQCGSCWSFSTTGSTEGANFLKHGRLTSL 158

Query: 185 SEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKF 244
           SEQ LVDC        +   + GCNGGLM+ AFEYI++  G++ E+ YPY  +  G+C++
Sbjct: 159 SEQNLVDC-------STSYGNHGCNGGLMDYAFEYIIRNKGIDTEESYPYHASQ-GTCRY 210

Query: 245 DKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGV-SCPYICGKY 301
           +K      + +++ + S  +    N V   P +V I+A     Q Y GGV   P      
Sbjct: 211 NKQHSGGELVSYTNVPSGNEGALLNAVATQPTSVAIDASHSSFQFYKGGVYDEPACSSSR 270

Query: 302 LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVS 359
           LDHGVL VG+G      +R   K YW++KNSWG +WG +GY ++   + N CG+ +  S
Sbjct: 271 LDHGVLAVGWG------VR-DGKDYWLVKNSWGADWGLSGYIEMSRNKHNQCGIATAAS 322


>gi|9630063|ref|NP_046281.1| cathepsin [Orgyia pseudotsugata MNPV]
 gi|2499880|sp|O10364.1|CATV_NPVOP RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|7435821|pir||T10394 cathepsin - Orgyia pseudotsugata nuclear polyhedrosis virus
 gi|1911371|gb|AAC59124.1| cathepsin [Orgyia pseudotsugata MNPV]
          Length = 324

 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 118/327 (36%), Positives = 181/327 (55%), Gaps = 30/327 (9%)

Query: 46  LLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLT 105
           LL A ++F  F  KF+K Y+++ E  +RF++F+ NL     +   D TA + + KFSDL+
Sbjct: 21  LLKAPNYFEDFLHKFNKNYSSESEKLHRFKIFQHNLEEIINKNQNDSTAQYEINKFSDLS 80

Query: 106 PSEFRRQFLGLNRRLRLPADAQ---KAPIL--PTNDLPTDFDWRDHGAVTGVKDQGACGS 160
             E   ++ GL+    LP   Q   +  IL  P +  P +FDWR    VT VK+QG CG+
Sbjct: 81  KEEAISKYTGLS----LPHQTQNFCEVVILDRPPDRGPLEFDWRQFNKVTSVKNQGVCGA 136

Query: 161 CWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYI 220
           CW+F+  G+LE    +    L++LSEQQ +DCD           ++GC+GGL+++AFE  
Sbjct: 137 CWAFATLGSLESQFAIKYNRLINLSEQQFIDCDR---------VNAGCDGGLLHTAFESA 187

Query: 221 LKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAV-SNFSVISSDEDQMAANLVKHGPLAVG 279
           ++ GGV+ E DYPY  T  G C+ + ++    V S    I   E+++   L   GP+ V 
Sbjct: 188 MEMGGVQMESDYPYE-TANGQCRINPNRFVVGVRSCRRYIVMFEEKLKDLLRAVGPIPVA 246

Query: 280 INAVWMQTYIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWG 338
           I+A  +  Y  G+     C  + L+H VL+VGY             PYWI+KN+WG +WG
Sbjct: 247 IDASDIVNYRRGIMRQ--CANHGLNHAVLLVGYAVEN-------NIPYWILKNTWGTDWG 297

Query: 339 ENGYYKICMGRNVCGVDSMVSSVAAIH 365
           E+GY+++    N CG+ + + S A I+
Sbjct: 298 EDGYFRVQQNINACGIRNELVSSAEIY 324


>gi|17384029|emb|CAD12392.1| cysteine proteinase [Leishmania infantum]
          Length = 354

 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 123/317 (38%), Positives = 169/317 (53%), Gaps = 25/317 (7%)

Query: 49  AEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVT-KFSDLTPS 107
           A  H+  FK +  K +    E   RF  FK N++ A      +P A + V+ KF+DLTP 
Sbjct: 38  ASAHYGRFKKRHGKPFGEDAEEGRRFNAFKQNMQTAYFLNAHNPHAHYDVSGKFADLTPQ 97

Query: 108 EFRRQFLGLNRRLRLPADAQKAPIL--PTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFS 165
           EF + +L  N   R   D ++   +           DWR+ G VT VK+QG CGSCW+F+
Sbjct: 98  EFAKLYLNPNYYARHGKDYKEHVHVDDSVRSGVMSVDWREKGVVTPVKNQGMCGSCWAFA 157

Query: 166 ATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK--A 223
            TG +EG   L    LVSLSEQ LV CD         + D GCNGGLM  A ++I+    
Sbjct: 158 TTGNIEGQWALKNHSLVSLSEQVLVSCD---------NIDDGCNGGLMQQAMQWIINDHN 208

Query: 224 GGVEREKDYPYTGTDGGSCK-FDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA 282
           G V  E  YPYT   G      D   + A +  +  +  DE+++AA + K+GP+AV ++A
Sbjct: 209 GTVPTEDSYPYTSAGGTRPPCHDNGTVGAKIKGYMSLPHDEEEIAAYVGKNGPVAVAVDA 268

Query: 283 VWMQTYIGGVSCPYIC-GKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENG 341
              Q Y GGV    +C G  L+HGVL+VG+        R  + PYWI+KNSWG +WGE G
Sbjct: 269 TTRQLYFGGVVT--LCFGLSLNHGVLVVGFN-------RQAKPPYWIVKNSWGSSWGEKG 319

Query: 342 YYKICMGRNVCGVDSMV 358
           Y ++ MG N C + + V
Sbjct: 320 YIRLAMGSNQCLLKNYV 336


>gi|62526575|gb|AAX84673.1| cysteine protease CP1 [Manihot esculenta]
          Length = 467

 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 132/357 (36%), Positives = 185/357 (51%), Gaps = 33/357 (9%)

Query: 9   LLLLLLSSVLASAVAVNDDDAMIR--QVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYAT 66
            +LL LS  L+SA     D ++I   Q   +      D  + A +   L K    K Y  
Sbjct: 12  FVLLFLSFTLSSA----SDMSIISYDQTHATKSSWRTDDEVMAIYEEWLVKQ--GKVYNA 65

Query: 67  QEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLN---RRLRLP 123
             E + RF+VFK NLR        + T   G+  F+DLT  E+R  +LG     +R RL 
Sbjct: 66  LGEREKRFQVFKDNLRFIDEHNSENRTYKLGLNGFADLTNEEYRSTYLGARGGMKRNRLR 125

Query: 124 ADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVS 183
             + +        LP   DWR  GAV  VKDQG+CGSCW+FS   A+EG + + TG+L+S
Sbjct: 126 KTSDRYAPRVGESLPDSVDWRKEGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGDLIS 185

Query: 184 LSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCK 243
           LSEQ+LVDCD         S + GCNGGLM+ AFE+I+  GG++ E+DYPY   DG    
Sbjct: 186 LSEQELVDCDT--------SYNEGCNGGLMDYAFEFIINNGGIDTEEDYPYLARDGRCDT 237

Query: 244 FDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKY 301
           + K+     + ++  +  + +      V + P++V I A     Q Y  G+     CG  
Sbjct: 238 YRKNAKVVTIDDYEDVPVNSETALQKAVANQPVSVAIEAGGRDFQFYASGIFSGR-CGTQ 296

Query: 302 LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRN----VCGV 354
           LDHGV  VGYG+          K YWI++NSWG++WGENGY ++    N    +CG+
Sbjct: 297 LDHGVAAVGYGTE-------NGKDYWIVRNSWGKSWGENGYLRMARSINSPTGICGI 346


>gi|238481789|gb|ACR43934.1| cathepsin L-like cysteine proteinase [Haliotis diversicolor
           supertexta]
          Length = 347

 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 132/315 (41%), Positives = 175/315 (55%), Gaps = 27/315 (8%)

Query: 56  FKSKFSKTYATQEEHDYRFRVFKANLR----RAKRRQLLDPTAVHGVTKFSDLTPSEFRR 111
           FK +  + Y   EE + RF +FK NL+      K+  L   +   G+ +F+D+   EFR 
Sbjct: 45  FKKQHGRLYEKHEEEEERFEIFKQNLQYIEEHNKKFSLGQKSYYLGINQFADMKNEEFR- 103

Query: 112 QFLGLNRRLRLPADAQKAPILPTNDL--PTDFDWRDHGAVTGVKDQGACGSCWSFSATGA 169
            + GL R      + Q +  L    L  P + DWR  G VT VK+QG CGSCWSFS TG+
Sbjct: 104 MYNGLRRDYNYSREVQCSNHLTPEYLVAPDEVDWRKKGYVTAVKNQGQCGSCWSFSTTGS 163

Query: 170 LEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVERE 229
           LEG HF  +G+LVSLSEQQLVDC  +   E       GCNGGLM+ AFEYI+  GG+E E
Sbjct: 164 LEGQHFHKSGKLVSLSEQQLVDCSGKFGNE-------GCNGGLMDQAFEYIITNGGIETE 216

Query: 230 KDYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVGINAVW--MQ 286
           ++YPY       C F KS++AA  S    V S DE  +  ++ + GP+++ I+A     Q
Sbjct: 217 EEYPYDARQ-ERCHFKKSEVAATASGCVDVKSGDETDLKNSVAEVGPVSIAIDASHQSFQ 275

Query: 287 TYIGGV-SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKI 345
            Y GGV   P      LDHGVL+VGYG+          + YW++KNSWG  WG  GY K+
Sbjct: 276 LYSGGVYDEPKCSSTELDHGVLVVGYGTD-------DGQDYWLVKNSWGTTWGLEGYVKM 328

Query: 346 CMGR-NVCGVDSMVS 359
              + N CGV +  S
Sbjct: 329 SRNQDNQCGVATQAS 343


>gi|449448298|ref|XP_004141903.1| PREDICTED: germination-specific cysteine protease 1-like [Cucumis
           sativus]
 gi|449531757|ref|XP_004172852.1| PREDICTED: germination-specific cysteine protease 1-like [Cucumis
           sativus]
          Length = 365

 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 127/361 (35%), Positives = 191/361 (52%), Gaps = 51/361 (14%)

Query: 8   SLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQ 67
           +LL     S+ ASA++             SDGE  E         + L+ +K  K Y   
Sbjct: 9   ALLSFFFLSISASALSRR-----------SDGEVRE--------IYDLWLAKHGKAYNGI 49

Query: 68  EEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLN-----RRLRL 122
           +E + RF++FK NL+        + T   G+  F+DLT  E+R  +LG       R ++ 
Sbjct: 50  DEREKRFQIFKENLKFIDDHNSENRTYKVGLNMFADLTNEEYRALYLGTRSPPARRVMKA 109

Query: 123 PADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELV 182
              +++  +   + LP   DWR  GAV  VK+QG+CGSCW+FS   A+EG + + TGEL+
Sbjct: 110 KTASRRYAVNNLDRLPESMDWRTRGAVAPVKNQGSCGSCWAFSTIAAVEGINQIVTGELI 169

Query: 183 SLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSC 242
           SLSEQ+LV CD +         +SGCNGGLM+ AF++I+  GG++ E+DYPY   DG   
Sbjct: 170 SLSEQELVSCDKK--------YNSGCNGGLMDYAFQFIIDNGGLDTEEDYPYEAFDGQCD 221

Query: 243 KFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSCPYICGK 300
              K+    ++  +  + +++++     V H P++V I A  + +Q Y  GV     CG 
Sbjct: 222 PTRKNAKVVSIDAYEDVPANDEESLKKAVAHQPVSVAIEASGLALQLYQSGVFTGK-CGS 280

Query: 301 YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNV-------CG 353
            LDHGV+ VGYG             YW+++NSWG +WGE+GY+K  + RNV       CG
Sbjct: 281 ALDHGVVAVGYGKENGV-------DYWLVRNSWGTSWGEDGYFK--LERNVKHITEGKCG 331

Query: 354 V 354
           +
Sbjct: 332 I 332


>gi|402770499|gb|AFQ98384.1| cathepsin L, partial [Hyalomma anatolicum anatolicum]
          Length = 312

 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 134/322 (41%), Positives = 173/322 (53%), Gaps = 33/322 (10%)

Query: 52  HFSLFKSKFSKTYATQEEHDYRFRVFKAN-LRRAKRRQLLDPTAVH---GVTKFSDLTPS 107
            +  FK+   K+Y ++ E   R+++F  N L  AK         V    G+ +F DL P 
Sbjct: 6   QWEAFKTTHKKSYQSKMEELLRYKIFTENSLLIAKHNAKYAKGLVSYKLGMNQFGDLLPH 65

Query: 108 EFRRQFLGLNRRLRLPADAQKAPILPTND--LPTDFDWRDHGAVTGVKDQGACGSCWSFS 165
           EF + F G +   R    +   P    ND  LP   DWR  GAVT VKDQG CGSCW+FS
Sbjct: 66  EFAKMFNGYHGE-RKGRGSTFLPPANVNDSSLPKTVDWRKKGAVTPVKDQGQCGSCWAFS 124

Query: 166 ATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSC-DSGCNGGLMNSAFEYILKAG 224
           ATG+LEG HFL +G+LVSLSEQ L+DC        SGS  + GC GGLM++AF+YI    
Sbjct: 125 ATGSLEGQHFLKSGKLVSLSEQNLIDC--------SGSFGNEGCGGGLMDNAFKYIKAND 176

Query: 225 GVEREKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVGINAV 283
           G++ E+ YPY   D G C+F K  + A  + F  +    ED +   +   GP++V I+A 
Sbjct: 177 GIDTEESYPYEAMD-GDCRFKKEDVGATDTGFVDIQQGSEDDLQKAVATVGPISVAIDAS 235

Query: 284 W--MQTYIGGV-SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGEN 340
               Q Y  GV   P    + LDHGVL VGYG           K YW++KNSW E WG+N
Sbjct: 236 HSSFQLYSEGVYDEPNCSSEELDHGVLAVGYGVK-------NGKKYWLVKNSWAETWGDN 288

Query: 341 GYYKICMGR---NVCGVDSMVS 359
           GY  I M R   N CG+ S  S
Sbjct: 289 GY--ILMSRDKDNQCGIASSAS 308


>gi|390337642|ref|XP_780653.3| PREDICTED: cathepsin L-like [Strongylocentrotus purpuratus]
          Length = 333

 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 129/318 (40%), Positives = 173/318 (54%), Gaps = 33/318 (10%)

Query: 56  FKSKFSKTYATQEEHDYRFRVFKANL----RRAKRRQLLDPTAVHGVTKFSDLTPSEFRR 111
           +K++  K Y + EE   R  +++ NL    +   +  L   T   G+ +F+DL   EF  
Sbjct: 31  WKNEHGKRYLSDEEEASRRLIWQKNLDIVIKHNLKYDLGHFTYDLGINQFTDLQNEEFVA 90

Query: 112 QFLGLNRRLRLPADAQKAPILPTN---DLPTDFDWRDHGAVTGVKDQGACGSCWSFSATG 168
              G  R       A+ +  LP N   +LP   DWR  G VT VKDQG CGSCW+FS TG
Sbjct: 91  MMTGF-RVSGTSKAAKGSTFLPPNNVGELPKTVDWRTKGYVTPVKDQGQCGSCWAFSTTG 149

Query: 169 ALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVER 228
           ++EG HF +TG+LVSLSEQ LVDC            D+GC+GG M+ AF+YI+ AGG++ 
Sbjct: 150 SVEGQHFKATGKLVSLSEQNLVDCSGR---------DAGCDGGFMDRAFQYIIDAGGIDT 200

Query: 229 EKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKH-GPLAVGINAVWM-- 285
           E  YPY   D G C F K+ + A V+ ++ ++S  ++     V H GP++V I+A  M  
Sbjct: 201 EASYPYKAVD-GKCHFKKANVGATVTGYTDVTSGSEKALQKAVAHVGPISVAIDASHMSF 259

Query: 286 QTYIGGVSCPYIC-GKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYK 344
           Q Y  GV     C    LDHGVL VGYG+S           YWI+KNSW E WG NGY  
Sbjct: 260 QHYKSGVYNEPGCDSTVLDHGVLAVGYGTSS------DGTDYWIVKNSWAETWGMNGY-- 311

Query: 345 ICMGR---NVCGVDSMVS 359
           + M R   N CG+ +  S
Sbjct: 312 VWMSRNKDNQCGIATNAS 329


>gi|330803818|ref|XP_003289899.1| hypothetical protein DICPUDRAFT_154350 [Dictyostelium purpureum]
 gi|325080010|gb|EGC33584.1| hypothetical protein DICPUDRAFT_154350 [Dictyostelium purpureum]
          Length = 326

 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 122/314 (38%), Positives = 176/314 (56%), Gaps = 30/314 (9%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           F  +  K  K+Y T +E   R+ VF+ N+    +        + G+   +DLT  EF++ 
Sbjct: 32  FQNWMVKHQKSY-TNDEFGSRYSVFQDNMDIVAKWNQKGSNTILGLNVMADLTNEEFKKL 90

Query: 113 FLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEG 172
           +LG    +      +K  ++  + LP   DWR +GAVT VK+QG CG C++FS TG++EG
Sbjct: 91  YLGTKANVTY----KKKTLVGVSGLPASVDWRANGAVTAVKNQGQCGGCYAFSTTGSVEG 146

Query: 173 AHFLSTGELVSLSEQQLVDCDHECDPEESGS-CDSGCNGGLMNSAFEYILKAGGVEREKD 231
            H +++ +LV LSEQQ++DC        SGS  ++GC+GGLM ++FEYI+  GG++ E  
Sbjct: 147 IHEITSQQLVPLSEQQILDC--------SGSEGNNGCDGGLMTNSFEYIIAVGGLDTEAS 198

Query: 232 YPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYI 289
           YPYTG + G CKF+K  I A ++ +  + S  +      V   P++V I+A     Q Y 
Sbjct: 199 YPYTG-EVGKCKFNKKNIGATITGYKNVESGSESDLQTAVAAQPVSVAIDASQSSFQLYA 257

Query: 290 GGVSC-PYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMG 348
            GV   P      LDHGVL VGYGS          + YWI+KNSWG +WGENG+  I M 
Sbjct: 258 SGVYYEPECSSTQLDHGVLAVGYGSQ-------SGQDYWIVKNSWGADWGENGF--ILMA 308

Query: 349 RNV---CGVDSMVS 359
           RN    CG+ +M S
Sbjct: 309 RNKDNNCGIATMAS 322


>gi|52345644|ref|NP_001004869.1| cathepsin L2 precursor [Xenopus (Silurana) tropicalis]
 gi|49522051|gb|AAH74718.1| MGC69486 protein [Xenopus (Silurana) tropicalis]
          Length = 335

 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 124/319 (38%), Positives = 176/319 (55%), Gaps = 22/319 (6%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH----GVTKFSDLT 105
           ++H++L+K+   K+YA +EE  +R  +++ NLR  +   L      H    G+ +F D+T
Sbjct: 26  DNHWNLWKNWHKKSYAPKEE-GWRRVLWEKNLRMIEFHNLEHSLGKHSHSLGMNQFGDMT 84

Query: 106 PSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFS 165
             EFR+   G   + ++      AP     + P   DWR  G VT VKDQG CGSCW+FS
Sbjct: 85  NEEFRQLMNGYKNQKKIRGSTFLAP--NNFESPKSVDWRKKGYVTPVKDQGQCGSCWAFS 142

Query: 166 ATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGG 225
            TGALEG H+ +TG+++SLSEQ LVDC            + GCNGGLM+ AF+Y+   GG
Sbjct: 143 TTGALEGQHYRNTGKMISLSEQNLVDC-------SRAQGNQGCNGGLMDQAFQYVKDNGG 195

Query: 226 VEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKH-GPLAVGINA-- 282
           ++ E  YPYT  D   C +D +  +A  + F  ++S  ++   N V   GP++V ++A  
Sbjct: 196 IDSEDSYPYTAKDDQECHYDPNYNSANDTGFVDVTSGSEKDLMNAVASVGPVSVAVDAGH 255

Query: 283 VWMQTYIGGVSC-PYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENG 341
              Q Y  G+   P    + LDHGVL+VGYG  G        K YWI+KNSW E WG +G
Sbjct: 256 QSFQFYKSGIYYEPECSSEDLDHGVLVVGYGFEGEDE---DGKKYWIVKNSWSEKWGNDG 312

Query: 342 YYKICMGR-NVCGVDSMVS 359
           Y  I   R N CG+ +  S
Sbjct: 313 YIYIAKDRHNHCGIATAAS 331


>gi|2804264|dbj|BAA24443.1| cysteine proteinase [Sitophilus zeamais]
          Length = 331

 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 142/363 (39%), Positives = 193/363 (53%), Gaps = 50/363 (13%)

Query: 10  LLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEE 69
           LLL+L++V+ S  AV+  D +  Q                   +S FK + SK Y ++ E
Sbjct: 3   LLLILAAVVISCQAVSFYDLVQEQ-------------------WSSFKMQHSKNYDSETE 43

Query: 70  HDYRFRVFKANLRR-AKRRQLLDPTAVH---GVTKFSDLTPSEFRRQFLGLNR---RLRL 122
             +R ++F  N  + AK  +L     V    G+ K++D+   EF     G N+    +  
Sbjct: 44  ERFRMKIFMENAHKVAKHSKLFSQGFVKFKLGLNKYADMLHHEFVSTLNGFNKTKNNILK 103

Query: 123 PADAQKAP--ILPTN-DLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTG 179
            +D   A   I P N  LP   DWRD GAVT VKDQG CGSCWSFS +G+LEG HF  TG
Sbjct: 104 GSDLNDAVRFISPANVKLPDTVDWRDKGAVTKVKDQGHCGSCWSFSGSGSLEGQHFRKTG 163

Query: 180 ELVSLSEQQLVDCDHECDPEESGSC-DSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTD 238
           +LVSLSEQ LVDC        SG   ++GCNGGLM++AF YI   GG++ E+ YPY   D
Sbjct: 164 KLVSLSEQNLVDC--------SGRYGNNGCNGGLMDNAFRYIKDNGGIDTEQSYPYLAED 215

Query: 239 GGSCKFDKSKIAAAVSNFSVISS-DEDQMAANLVKHGPLAVGINAVW--MQTYIGGV-SC 294
              C +      A    F  I   +ED + A +   GP+++ I+A +   Q Y  GV S 
Sbjct: 216 -EKCHYKTQNSGATDKGFVDIEEGNEDDLKAAVATVGPISIAIDASYETFQLYSDGVYSD 274

Query: 295 PYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCG 353
           P    + LDHGVL+VGYG+S         + YW++KNSW  + G NGY K+   + N+CG
Sbjct: 275 PECISQELDHGVLVVGYGTSD------DGQDYWLVKNSWRPSCGLNGYIKMARNQDNMCG 328

Query: 354 VDS 356
           V S
Sbjct: 329 VAS 331


>gi|149755237|ref|XP_001495795.1| PREDICTED: cathepsin L1-like [Equus caballus]
          Length = 339

 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 126/312 (40%), Positives = 169/312 (54%), Gaps = 23/312 (7%)

Query: 56  FKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVT----KFSDLTPSEFRR 111
           +K+   + Y   +E  +R  V++ N+R  +          HG T     F D+T  EFR+
Sbjct: 32  WKATHRRLYGVNKEA-WRRAVWEKNMRMIELHNQEYSQGKHGFTMAMNAFGDMTNEEFRQ 90

Query: 112 QFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALE 171
              GL+ +        + P+  + +LP   DWR  G VT VK+QG CGSCW+FSATGALE
Sbjct: 91  VMNGLHNQTHKKGRVFREPL--SAELPKSVDWRKKGYVTPVKNQGLCGSCWAFSATGALE 148

Query: 172 GAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKD 231
           G  F  TG+LVSLSEQ LVDC            + GC+GGLM+ AF+Y+   GG++ EK 
Sbjct: 149 GQMFRKTGKLVSLSEQNLVDCSW-------AQGNEGCSGGLMDYAFQYVKDNGGLDSEKS 201

Query: 232 YPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYI 289
           YPY   D G CK+     AA  + F  I   E  +   +   GP++ GI+A     Q Y 
Sbjct: 202 YPYLAED-GFCKYKPEYSAANDTGFLDIQQQEKFLMEAVATVGPISAGIDASLESFQFYK 260

Query: 290 GGVSC-PYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMG 348
            G+   P    KYLDHGVL+VGYG  G    +     YW++KNSWGE+WG NGY K+   
Sbjct: 261 EGIYYDPDCSSKYLDHGVLVVGYGFEG----KDSRNKYWLVKNSWGEDWGMNGYIKMAKD 316

Query: 349 R-NVCGVDSMVS 359
           R N CG+ +M S
Sbjct: 317 RENHCGIATMAS 328


>gi|157132324|ref|XP_001655999.1| cathepsin l [Aedes aegypti]
 gi|108881694|gb|EAT45919.1| AAEL002833-PA [Aedes aegypti]
          Length = 339

 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 140/367 (38%), Positives = 195/367 (53%), Gaps = 51/367 (13%)

Query: 10  LLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEE 69
           +L+LL + +A+A AV+     + ++V  +              ++ FK +  K Y ++ E
Sbjct: 3   ILILLMAFVAAANAVS-----LYELVKEE--------------WNAFKLQHRKNYDSETE 43

Query: 70  HDYRFRVFKANLRR-AKRRQLLDPTAVH---GVTKFSDLTPSEFRRQFLGLNR---RLRL 122
              R +++  N  + AK  Q  D         V K++DL   EF +   G NR   +  L
Sbjct: 44  ERIRLKIYVQNKHKIAKHNQRFDLGQEKYRLRVNKYADLLHEEFVQTVNGFNRTDSKKSL 103

Query: 123 PADAQKAPIL---PTN-DLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLST 178
                + P+    P N ++PT  DWR  GAVT VKDQG CGSCWSFSATGALEG HF  T
Sbjct: 104 KGVRIEEPVTFIEPANVEVPTTVDWRKKGAVTPVKDQGHCGSCWSFSATGALEGQHFRKT 163

Query: 179 GELVSLSEQQLVDCDHECDPEESGSC-DSGCNGGLMNSAFEYILKAGGVEREKDYPYTGT 237
           G+LVSLSEQ LVDC        SG   ++GCNGG+M+ AF+YI   GG++ EK YPY   
Sbjct: 164 GKLVSLSEQNLVDC--------SGKYGNNGCNGGMMDYAFQYIKDNGGIDTEKSYPYEAI 215

Query: 238 DGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSC 294
           D  +C F+   + A    +  +   DE+ +   L   GP+++ I+A     Q Y  GV  
Sbjct: 216 D-DTCHFNPKAVGATDKGYVDIPQGDEEALKKALATVGPVSIAIDASHESFQFYSEGVYY 274

Query: 295 PYIC-GKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVC 352
              C  + LDHGVL VGYG+S       + + YW++KNSWG  WG+ GY K+   R N C
Sbjct: 275 EPQCDSENLDHGVLAVGYGTSE------EGEDYWLVKNSWGTTWGDQGYVKMARNRDNHC 328

Query: 353 GVDSMVS 359
           GV +  S
Sbjct: 329 GVATCAS 335


>gi|535473|emb|CAA53377.1| cysteine protease [Vicia sativa]
          Length = 368

 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 118/312 (37%), Positives = 168/312 (53%), Gaps = 25/312 (8%)

Query: 59  KFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLG--- 115
           K  K Y    E D RF++FK NL         + T + G+ KF+D+T  E+R  +LG   
Sbjct: 45  KHQKVYNGLREKDQRFQIFKDNLNFIDEHNAQNYTYIVGLNKFADMTNEEYRDMYLGTRS 104

Query: 116 -LNRR-LRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGA 173
            + RR ++      +      + LP   DWR  GA+T +KDQG+CGSCW+FS    +E  
Sbjct: 105 DIKRRIMKNKITGHRYAYNSGDRLPVHVDWRLKGAITHIKDQGSCGSCWAFSTIATVEAI 164

Query: 174 HFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYP 233
           + + TG+LVSLSEQ+LVDCD         + + GCNGGLM+ AFE+I+  GG++ ++ YP
Sbjct: 165 NKIVTGKLVSLSEQELVDCDR--------AFNEGCNGGLMDYAFEFIIGNGGIDTDQHYP 216

Query: 234 YTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAV--WMQTYIGG 291
           Y G +G      K     ++  +  + S+ +      V H P++V I A    +Q Y  G
Sbjct: 217 YKGFEGRCDPTRKKAKIVSIDGYEDVPSNNENALKKAVAHQPVSVAIEASGRALQLYQSG 276

Query: 292 VSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNV 351
           V     CG  LDH V+IVGYGS            YW+++NSWG NWGE+GY+K  M RNV
Sbjct: 277 VFTGK-CGTSLDHAVVIVGYGSE-------NGLDYWLVRNSWGTNWGEDGYFK--MERNV 326

Query: 352 CGVDSMVSSVAA 363
            G  +    +A 
Sbjct: 327 KGTHTGKCGIAV 338


>gi|258406688|gb|ACV72067.1| putative cysteine protease [Lathyrus sativus]
          Length = 350

 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 139/361 (38%), Positives = 196/361 (54%), Gaps = 39/361 (10%)

Query: 8   SLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHH---FSLFKSKFSKTY 64
           SLL++L     A+A     D   IR V  SD E+    ++    H   F+ F +++ K Y
Sbjct: 5   SLLIVLFCVTTAAAGFSFHDSNPIRMV--SDAEEQLLQVIGESRHAVSFARFANRYGKLY 62

Query: 65  ATQEEHDYRFRVFKANL---RRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLR 121
            + +E   RF++F  NL   R   +R+L   +   GV  F+D T  EF+   LG  +   
Sbjct: 63  DSVDEMKLRFKIFSENLELIRSTNKRRL---SYKLGVNHFADWTWEEFKSHRLGAAQNC- 118

Query: 122 LPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGEL 181
             A  +    +   +LP + DWR  G V+ VKDQG CGSCW+FS TGALE A+  + G+ 
Sbjct: 119 -SATLKGNHKITDANLPDEKDWRKEGIVSEVKDQGHCGSCWTFSTTGALESAYAQAFGKN 177

Query: 182 VSLSEQQLVDCDHECDPEESGSCDS-GCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGG 240
           +SLSEQQLVDC        +G+ ++ GC+GGL + AFEYI   GG+E E+ YPYTG++ G
Sbjct: 178 ISLSEQQLVDC--------AGAFNNFGCSGGLPSQAFEYIKYNGGLETEETYPYTGSN-G 228

Query: 241 SCKFDKSKIAAAV---SNFSVISSDEDQMAANLVKHGPLAVGINAVW-MQTYIGGVSCPY 296
            CKF    +A  V    N ++ S DE + A    +  P++V    V   + Y  GV    
Sbjct: 229 LCKFTSENVALKVLGSVNITLGSEDELKHAVAFAR--PVSVAFEVVHDFRLYKSGVYTST 286

Query: 297 ICGKY---LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCG 353
            CG     ++H VL VGYG            PYW IKNSWG +WG++GY+K+ MG+N+CG
Sbjct: 287 ACGNTPMDVNHAVLAVGYGIE-------DGIPYWHIKNSWGGDWGDHGYFKMEMGKNMCG 339

Query: 354 V 354
           V
Sbjct: 340 V 340


>gi|359491865|ref|XP_002273243.2| PREDICTED: xylem cysteine proteinase 1-like [Vitis vinifera]
          Length = 351

 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 135/364 (37%), Positives = 192/364 (52%), Gaps = 34/364 (9%)

Query: 6   LSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYA 65
            S+  LL +S  + +  A   D +++      D   S D L +    F  + SK  K+Y 
Sbjct: 6   FSNFFLLFISMAVFAYSAFARDFSIVG--YSPDDLTSMDKLTDL---FESWMSKHGKSYR 60

Query: 66  TQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPAD 125
           + EE  +RF VF+ NL+          +   G+ +F+DL+  EF+R++LGL   L    D
Sbjct: 61  SFEEKLHRFEVFQDNLKHIDETNKKVSSYWLGLNEFADLSHEEFKRKYLGLKIELPKRRD 120

Query: 126 A-QKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSL 184
           + ++       DLP   DWR  GAV  VK+QGACGSCW+FS   A+EG + + TG L +L
Sbjct: 121 SPEEFSYKDVADLPKSVDWRKKGAVAHVKNQGACGSCWAFSTVAAVEGINQIVTGNLTAL 180

Query: 185 SEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKF 244
           SEQ+L+DCD           ++GCNGGLM+ AF +I+  GG+ +E+DYPY   + G+C  
Sbjct: 181 SEQELIDCDK--------PFNNGCNGGLMDYAFAFIISNGGLRKEEDYPYV-MEEGTCGE 231

Query: 245 DKSKI-AAAVSNFSVISSDEDQMAANLVKHGPLAVGINAV--WMQTYIGGVSCPYICGKY 301
            K ++    +S +  +  D +Q     + + PL+V I A     Q Y GG+   + CG  
Sbjct: 232 KKEELEVVTISGYHDVPEDNEQSFLKALANQPLSVAIEASSRGFQFYSGGIFNGH-CGTE 290

Query: 302 LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNV------CGVD 355
           LDHGV  VGYG+S       K   Y  +KNSWG  WGE GY  I M RNV      CG+ 
Sbjct: 291 LDHGVAAVGYGTS-------KGVDYITVKNSWGSKWGEKGY--IRMKRNVGKPEGICGIY 341

Query: 356 SMVS 359
            M S
Sbjct: 342 KMAS 345


>gi|281346354|gb|EFB21938.1| hypothetical protein PANDA_009085 [Ailuropoda melanoleuca]
          Length = 333

 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 124/320 (38%), Positives = 175/320 (54%), Gaps = 22/320 (6%)

Query: 48  NAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH----GVTKFSD 103
           N +  ++ +K+   K Y   EE  +R  V++ N++   +         H     +  F D
Sbjct: 24  NLDARWTRWKAANGKLYNKDEEV-WRRAVWEKNMKMIDQHNEEYSQGKHSFILAMNAFGD 82

Query: 104 LTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWS 163
           LT  EF++   GL  +++ P +     +LP  + P+  DWR+ G VT VKDQG CGSCW+
Sbjct: 83  LTNEEFKQVMNGL--KIQNPREGNMFQLLPFAETPSSVDWREKGYVTPVKDQGQCGSCWA 140

Query: 164 FSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA 223
           FSATGALEG  F  TG+LVSLSEQ LVDC            ++GCNGGLM++AF Y+   
Sbjct: 141 FSATGALEGQMFRKTGKLVSLSEQNLVDCSR-------AEGNAGCNGGLMDNAFRYVKDN 193

Query: 224 GGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA- 282
           GG++ E+ YPY   D G CK+   + AA  + F+ I  DE+ +  ++   GP++V I+A 
Sbjct: 194 GGLDSEESYPYLAQD-GRCKYKPEQSAANDTGFADIHQDEESLMLSVATVGPISVAIDAS 252

Query: 283 --VWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGEN 340
              +   Y G    P    + LDHGVL+VGYGS        + K YWI+KNSWG  WG  
Sbjct: 253 LDTFRFYYKGIYYDPNCSSEDLDHGVLVVGYGSD---EREAENKNYWIVKNSWGTQWGMQ 309

Query: 341 GYYKICMGR-NVCGVDSMVS 359
           GY  +   R N CG+ +  S
Sbjct: 310 GYILMAKDRGNHCGIATSAS 329


>gi|91092014|ref|XP_970644.1| PREDICTED: similar to cathepsin-L-like cysteine peptidase 02
           [Tribolium castaneum]
 gi|270001249|gb|EEZ97696.1| cathepsin L precursor [Tribolium castaneum]
          Length = 337

 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 131/326 (40%), Positives = 175/326 (53%), Gaps = 30/326 (9%)

Query: 49  AEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRR-AKRRQLLDPTAVH---GVTKFSDL 104
            +  +  FK    K Y ++ E  +R ++F  N  + AK  +L     V    GV K+SD+
Sbjct: 23  VQEQWGAFKVTHKKQYESETEERFRMKIFMENAHKVAKHNKLYAQGLVSFKLGVNKYSDM 82

Query: 105 TPSEFRRQFLGLNRRLRLPA-----DAQKAPILPTN-DLPTDFDWRDHGAVTGVKDQGAC 158
              EF     G NR  + P      D     I P N +LP   DWR  GAVT VKDQG C
Sbjct: 83  LNHEFVHTLNGYNRS-KTPLRSGELDESITFIPPANVELPKQIDWRKLGAVTPVKDQGQC 141

Query: 159 GSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFE 218
           GSCWSFS TG+LEG HF  + +LVSLSEQ L+DC      E+ G  ++GCNGGLM++AF 
Sbjct: 142 GSCWSFSTTGSLEGQHFRKSKKLVSLSEQNLIDCS-----EKYG--NNGCNGGLMDNAFR 194

Query: 219 YILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISS-DEDQMAANLVKHGPLA 277
           YI   GG++ E+ YPY   D   C +      A    F  I S DE+++ A +   GP++
Sbjct: 195 YIKDNGGIDTEQSYPYKAED-EKCHYKPRNKGATDRGFVDIESGDEEKLKAAVATVGPIS 253

Query: 278 VGINAVW--MQTYIGGVSC-PYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWG 334
           V I+A     Q Y  GV   P    + LDHGVL+VGYG+            YW++KNSWG
Sbjct: 254 VAIDASHPTFQQYSEGVYYEPECSSEQLDHGVLVVGYGTDEDG------NDYWLVKNSWG 307

Query: 335 ENWGENGYYKICMGR-NVCGVDSMVS 359
           ++WG+ GY K+   R N CG+ +  S
Sbjct: 308 DSWGDQGYIKMARNRDNNCGIATQAS 333


>gi|195429415|ref|XP_002062758.1| GK19626 [Drosophila willistoni]
 gi|194158843|gb|EDW73744.1| GK19626 [Drosophila willistoni]
          Length = 341

 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 128/323 (39%), Positives = 175/323 (54%), Gaps = 30/323 (9%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRR-AKRRQLLDPTAVH---GVTKFSDLTPSE 108
           ++ FK +  K YA   E  +R ++F  N    AK  Q      V     + K++D+   E
Sbjct: 29  WNTFKLEHRKNYADSTEETFRMKIFNENKHHIAKHNQRYATGEVSYKLALNKYADMLHHE 88

Query: 109 FRRQFLGLN----RRLRLPADAQKAPILPTND---LPTDFDWRDHGAVTGVKDQGACGSC 161
           FR    G N    ++LR   ++       + +   LPT  DWR  GAVT VKDQG CGSC
Sbjct: 89  FRETMNGFNYTLHKQLRSTDESFTGVTFISPEHVKLPTAVDWRTKGAVTEVKDQGHCGSC 148

Query: 162 WSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYIL 221
           W+FS+TGA+EG HF  +G LVSLSEQ LVDC        +   ++GCNGGLM++AF Y+ 
Sbjct: 149 WAFSSTGAIEGQHFRKSGTLVSLSEQNLVDC-------STKYGNNGCNGGLMDNAFRYVK 201

Query: 222 KAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVI-SSDEDQMAANLVKHGPLAVGI 280
             GG++ EK Y Y G D  SC FDK+ I A    F+ I   +E ++A  +   GP++V I
Sbjct: 202 DNGGIDTEKSYAYEGID-DSCHFDKNSIGATDRGFADIPQGNEKKLAQAVATIGPVSVAI 260

Query: 281 NAVW--MQTYIGGV-SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENW 337
           +A     Q Y  GV   P    + LDHGVL+VGYG+            YW++KNSWG  W
Sbjct: 261 DASQQSFQFYSEGVYDEPNCSAENLDHGVLVVGYGTEKDGS------DYWLVKNSWGTTW 314

Query: 338 GENGYYKICMGR-NVCGVDSMVS 359
           G+ G+ K+   + N CG+ S  S
Sbjct: 315 GDKGFIKMSRNKENQCGIASASS 337


>gi|15617524|ref|NP_258322.1| cathepsin-like cysteine proteinase [Spodoptera litura NPV]
 gi|37077642|sp|Q91BH1.1|CATV_NPVST RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|15553260|gb|AAL01738.1|AF325155_50 cathepsin-like cysteine proteinase [Spodoptera litura NPV]
          Length = 337

 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 123/326 (37%), Positives = 172/326 (52%), Gaps = 33/326 (10%)

Query: 49  AEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSE 108
           A  ++  F  + +K Y T ++ D  F  FK NL        +   AV+G+ KFSD+    
Sbjct: 29  ASVYYENFIKQHNKEYTTPDQRDAAFVNFKRNLADMNAMNNVSNQAVYGINKFSDIDKIT 88

Query: 109 FRRQFLGLNRRLRLPADAQKAPIL---------PTNDLPTDFDWRDHGAVTGVKDQGACG 159
           F  +  GL   L    D+   P           P+   P  FDWR    VT VK+QG CG
Sbjct: 89  FVNEHAGLVSNLINSTDSNFDPYRLCEYVTVAGPSARTPESFDWRKLNKVTKVKEQGVCG 148

Query: 160 SCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEY 219
           SCW+F+A G +E  + +    L+ LSEQQL+DCD           D GC+GGLM+ AF+ 
Sbjct: 149 SCWAFAAIGNIESQYAIMHDSLIDLSEQQLLDCDR---------VDQGCDGGLMHLAFQE 199

Query: 220 ILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAV 278
           I++ GGVE E DYPY G +  +C+   SK+A  +S+ +     DE ++   L K+GP+AV
Sbjct: 200 IIRIGGVEHEIDYPYQGIE-YACRLAPSKLAVRLSHCYQYDLRDERKLLELLYKNGPIAV 258

Query: 279 GINAVWMQTYIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENW 337
            I+ V +  Y  G++   +C    L+H VL+VGYG          + PYWI KNSWG NW
Sbjct: 259 AIDCVDIIDYRSGIAT--VCNDNGLNHAVLLVGYGIE-------NDTPYWIFKNSWGSNW 309

Query: 338 GENGYYKICMGRNVCGVDSMVSSVAA 363
           GENGY++     N CG   M++  AA
Sbjct: 310 GENGYFRARRNINACG---MLNEFAA 332


>gi|397133545|gb|AFO10079.1| V-CATH [Bombyx mandarina nucleopolyhedrovirus S2]
          Length = 323

 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 116/326 (35%), Positives = 181/326 (55%), Gaps = 29/326 (8%)

Query: 46  LLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLT 105
           LL A ++F  F  +F+K Y ++ E   RF++F+ NL     +   D +A + + KFSDL+
Sbjct: 21  LLKAPNYFEEFVHRFNKDYGSEVEKLRRFKIFQHNLNEIINKDQND-SAKYEINKFSDLS 79

Query: 106 PSEFRRQFLGLNRRLRLPADAQ---KAPIL--PTNDLPTDFDWRDHGAVTGVKDQGACGS 160
             E   ++ GL+    LP   Q   K  +L  P    P +FDWR    VT VK+QG CG+
Sbjct: 80  KDETIAKYTGLS----LPIQTQNFCKVIVLDQPPGKGPLEFDWRRLNKVTSVKNQGMCGA 135

Query: 161 CWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYI 220
           CW+F+   +LE    +   +L++LSEQQ++DCD           D+GCNGGL+++AFE I
Sbjct: 136 CWAFATLASLESQFAIKHNQLINLSEQQMIDCDF---------VDAGCNGGLLHTAFEAI 186

Query: 221 LKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVG 279
           +K GGV+ E DYPY   D  +C+ + +K    V + +  I+  E+++   L   GP+ + 
Sbjct: 187 IKMGGVQLESDYPYEA-DNNNCRMNSNKFLVQVKDCYRYITVYEEKLKDLLRLVGPIPMA 245

Query: 280 INAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGE 339
           I+A  +  Y  G+   Y     L+H VL+VGYG            PYW  KN+WG +WGE
Sbjct: 246 IDAADIVNYKQGI-IKYCFNSGLNHAVLLVGYGVEN-------NIPYWTFKNTWGTDWGE 297

Query: 340 NGYYKICMGRNVCGVDSMVSSVAAIH 365
           +G++++    N CG+ + ++S A I+
Sbjct: 298 DGFFRVQQNINACGMRNELASTAVIY 323


>gi|33348834|gb|AAQ16117.1| cathepsin L-like cysteine proteinase A [Rhipicephalus
           haemaphysaloides haemaphysaloides]
          Length = 332

 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 143/364 (39%), Positives = 183/364 (50%), Gaps = 50/364 (13%)

Query: 9   LLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQE 68
           L L LL +++A  VA N  + +  Q                   +  FK+   K+Y +  
Sbjct: 2   LRLSLLCAIVAVTVAANSHEILRTQ-------------------WEAFKTTHKKSYESHM 42

Query: 69  EHDYRFRVFKAN-LRRAKRRQLLDPTAVH---GVTKFSDLTPSEFRRQFLGLNRRLRLPA 124
           E   RF++F  N L  AK         V    G+ +F DL   EF + F G  R  R   
Sbjct: 43  EELLRFKIFTENSLIIAKHNAKYAKGLVSYKLGMNQFGDLLAHEFAKIFNGY-RGQRTSR 101

Query: 125 DAQKAPILPTND--LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELV 182
            +   P    ND  LP+  DWR  GAVT VKDQG CGSCW+FSATG+LEG HFL  GELV
Sbjct: 102 GSTFMPPANVNDSSLPSTVDWRKKGAVTPVKDQGQCGSCWAFSATGSLEGQHFLKDGELV 161

Query: 183 SLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSC 242
           SLSEQ LVDC            ++GC GGLM++AF+YI    G++ E+ YPY   D   C
Sbjct: 162 SLSEQNLVDCSQSFG-------NNGCEGGLMDNAFKYIKANDGIDAEESYPYEAMD-DKC 213

Query: 243 KFDKSKIAAAVSNFSVIS-SDEDQMAANLVKHGPLAVGINA--VWMQTYIGGV-SCPYIC 298
           +F K  + A  + F  I    ED +   +   GP++V I+A     Q Y  GV   P   
Sbjct: 214 RFKKEDVGATDTGFVDIEGGSEDDLKKAVATVGPISVAIDAGHSSFQLYSEGVYDEPECS 273

Query: 299 GKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR---NVCGVD 355
            + LDHGVL VGYG           K YW++KNSWG +WG+NGY  I M R   N CG+ 
Sbjct: 274 SEELDHGVLAVGYGVK-------DGKKYWLVKNSWGGSWGDNGY--ILMSRDKNNQCGIA 324

Query: 356 SMVS 359
           S  S
Sbjct: 325 SAAS 328


>gi|342305188|dbj|BAK55648.1| cathepsin L [Oplegnathus fasciatus]
          Length = 336

 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 130/321 (40%), Positives = 174/321 (54%), Gaps = 24/321 (7%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH----GVTKFSDLT 105
           + H+ L+KS  +K Y  +EE  +R  V++ NL++ +   L      H    G+  F D+T
Sbjct: 25  DEHWDLWKSWHTKKYHEKEE-GWRRMVWEKNLKKIELHNLEHSMGEHTYRLGMNHFGDMT 83

Query: 106 PSEFRRQFLGLNRRLRLPADAQKAPILPTNDL--PTDFDWRDHGAVTGVKDQGACGSCWS 163
             EFR+   G  R+       + +  +  N L  P   DWRD+G VT VKDQG CGSCW+
Sbjct: 84  HEEFRQIMYGYKRKSE--RKFKGSLFMEPNFLEAPRSVDWRDNGYVTPVKDQGQCGSCWA 141

Query: 164 FSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA 223
           FS TGA+EG HF  TG+LVSLSEQ LVDC     PE     + GCNGGLM+ AF+YI   
Sbjct: 142 FSTTGAMEGQHFRKTGKLVSLSEQNLVDCSR---PE----GNEGCNGGLMDQAFQYIKDN 194

Query: 224 GGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVGINA 282
            G++ E  YPY GTD   C +D    +A  + F  + S  E  +   +   GP++V I+A
Sbjct: 195 QGLDSEDSYPYLGTDDQPCHYDPKYNSANDTGFIDIPSGKERALMKAVAAVGPVSVAIDA 254

Query: 283 --VWMQTYIGGVSCPYIC-GKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGE 339
                Q Y  G+     C  + LDHGVL+VGY   GF       K YWI+KNSW E WG+
Sbjct: 255 GHESFQFYQSGIYYEKECSSEELDHGVLVVGY---GFEGEDVDGKKYWIVKNSWSEKWGD 311

Query: 340 NGYYKICMGR-NVCGVDSMVS 359
            GY  +   R N CG+ +  S
Sbjct: 312 KGYIYMAKDRKNHCGIATAAS 332


>gi|9627870|ref|NP_054157.1| viral cathepsin-like protein [Autographa californica
           nucleopolyhedrovirus]
 gi|114680178|ref|YP_758591.1| viral cathepsin [Plutella xylostella multiple nucleopolyhedrovirus]
 gi|115751|sp|P25783.1|CATV_NPVAC RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|332491|gb|AAA46752.1| viral cathepsin [Autographa californica nucleopolyhedrovirus]
 gi|559196|gb|AAA66757.1| viral cathepsin-like protein [Autographa californica
           nucleopolyhedrovirus]
 gi|113015253|gb|ABE68510.1| viral cathepsin [Plutella xylostella multiple nucleopolyhedrovirus]
          Length = 323

 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 116/326 (35%), Positives = 181/326 (55%), Gaps = 29/326 (8%)

Query: 46  LLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLT 105
           LL A ++F  F  +F+K Y ++ E   RF++F+ NL     +   D +A + + KFSDL+
Sbjct: 21  LLKAPNYFEEFVHRFNKDYGSEVEKLRRFKIFQHNLNEIINKNQND-SAKYEINKFSDLS 79

Query: 106 PSEFRRQFLGLNRRLRLPADAQ---KAPIL--PTNDLPTDFDWRDHGAVTGVKDQGACGS 160
             E   ++ GL+    LP   Q   K  +L  P    P +FDWR    VT VK+QG CG+
Sbjct: 80  KDETIAKYTGLS----LPIQTQNFCKVIVLDQPPGKGPLEFDWRRLNKVTSVKNQGMCGA 135

Query: 161 CWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYI 220
           CW+F+   +LE    +   +L++LSEQQ++DCD           D+GCNGGL+++AFE I
Sbjct: 136 CWAFATLASLESQFAIKHNQLINLSEQQMIDCDF---------VDAGCNGGLLHTAFEAI 186

Query: 221 LKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVG 279
           +K GGV+ E DYPY   D  +C+ + +K    V + +  I+  E+++   L   GP+ + 
Sbjct: 187 IKMGGVQLESDYPYEA-DNNNCRMNSNKFLVQVKDCYRYITVYEEKLKDLLRLVGPIPMA 245

Query: 280 INAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGE 339
           I+A  +  Y  G+   Y     L+H VL+VGYG            PYW  KN+WG +WGE
Sbjct: 246 IDAADIVNYKQGI-IKYCFNSGLNHAVLLVGYGVEN-------NIPYWTFKNTWGTDWGE 297

Query: 340 NGYYKICMGRNVCGVDSMVSSVAAIH 365
           +G++++    N CG+ + ++S A I+
Sbjct: 298 DGFFRVQQNINACGMRNELASTAVIY 323


>gi|6630974|gb|AAF19631.1|AF194427_1 cysteine proteinase precursor [Myxine glutinosa]
          Length = 324

 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 130/309 (42%), Positives = 171/309 (55%), Gaps = 25/309 (8%)

Query: 56  FKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH----GVTKFSDLTPSEFRR 111
           +K K+ K+Y  + E   R RV+++NL+  ++  +L          G+  ++DL   EF  
Sbjct: 22  WKGKYGKSYLGRGEEVLRKRVWESNLQIVQQHNVLADQGQANYRLGMNTYADLYNEEFMA 81

Query: 112 -QFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGAL 170
            +  G   + +  +  Q    L    LP+  DWR+ G VT VKDQG CGSCW+FSATG+L
Sbjct: 82  LKGSGGLLQAKDKSSTQTFKPLVGVTLPSSVDWRNQGYVTPVKDQGQCGSCWTFSATGSL 141

Query: 171 EGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREK 230
           EG HF  TG L+SLSEQQLVDC            + GCNGGLM SA++YI   GGVE E 
Sbjct: 142 EGQHFAKTGNLLSLSEQQLVDCAGRYG-------NYGCNGGLMESAYDYIKGVGGVELES 194

Query: 231 DYPYTGTDGGSCKFDKSKIAAAVSNFSVIS-SDEDQMAANLVKHGPLAVGINA--VWMQT 287
            YPYT  D G CKFD+SK+ A    + VI   DE  +   +   GP+AV I+A     Q 
Sbjct: 195 AYPYTARD-GRCKFDRSKVVATCKGYVVIPVGDEQALMQAVGTIGPVAVSIDASGYSFQL 253

Query: 288 YIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKIC 346
           Y  GV     C    LDHGVL VGYG+ G        + YW++KNSWG  WG+ GY K+ 
Sbjct: 254 YESGVYDFRRCSSTNLDHGVLAVGYGTEG-------GQNYWLVKNSWGPGWGDQGYIKMS 306

Query: 347 MGR-NVCGV 354
             + N CG+
Sbjct: 307 KDKNNQCGI 315


>gi|71084306|gb|AAZ23598.1| cysteine protease [Leishmania major]
          Length = 327

 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 123/311 (39%), Positives = 170/311 (54%), Gaps = 25/311 (8%)

Query: 49  AEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVT-KFSDLTPS 107
           A  H+  FK +  K++    +  +RF  FK N++ A      +P A + V+ KF+DLTP 
Sbjct: 11  ASAHYGRFKERHGKSFGEDADEGHRFNAFKQNMQTAYFLNTHNPHAHYDVSGKFADLTPQ 70

Query: 108 EFRRQFLGLNRRLRLPADAQKAPILPTNDL--PTDFDWRDHGAVTGVKDQGACGSCWSFS 165
           EF + +L  +   R   D ++   +  + L      DWR+  AVT VK+QG CGSCW+FS
Sbjct: 71  EFAKLYLNPDYYARRGKDYKEHVHVDDSVLSGAMSVDWREKVAVTPVKNQGMCGSCWAFS 130

Query: 166 ATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK--A 223
           A G +E    L    LVSLSEQ LV CD           D GCNGGLM+ A E+I++   
Sbjct: 131 AIGNIESQWALKNHSLVSLSEQMLVSCD---------DIDDGCNGGLMDQAMEWIIQHHN 181

Query: 224 GGVEREKDYPYTGTDGGSCK-FDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA 282
           G V  E+ YPY    G S    DK +  A +S +  +  DE  +AA + K GP+AV ++A
Sbjct: 182 GTVPTEESYPYASAGGTSPPCHDKGEFGARISGYMSLPHDEKAIAAYVEKKGPVAVAVDA 241

Query: 283 VWMQTYIGGVSCPYIC-GKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENG 341
              Q Y GGV    +C G  L+HGVL+VG+        +  + PYWI+KNSWG +WGE G
Sbjct: 242 TTWQLYFGGVVT--LCFGWSLNHGVLVVGFN-------KRAKPPYWIVKNSWGTSWGEKG 292

Query: 342 YYKICMGRNVC 352
           Y ++ MG N C
Sbjct: 293 YIRLAMGSNQC 303


>gi|438000427|ref|YP_007250532.1| v-cath protein [Thysanoplusia orichalcea NPV]
 gi|429842964|gb|AGA16276.1| v-cath protein [Thysanoplusia orichalcea NPV]
          Length = 323

 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 118/326 (36%), Positives = 183/326 (56%), Gaps = 29/326 (8%)

Query: 46  LLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLT 105
           LL A ++F  F  +F+K Y+++ E   RF++F+ NL     +   D +A + + KFSDL+
Sbjct: 21  LLKAPNYFEEFVHRFNKNYSSETEKLRRFKIFQHNLNEIINKNQND-SAKYEINKFSDLS 79

Query: 106 PSEFRRQFLGLNRRLRLPADAQ---KAPIL--PTNDLPTDFDWRDHGAVTGVKDQGACGS 160
             E   ++ GL+    LP   Q   K  IL  P    P DFDWR    VT VK+QG CG+
Sbjct: 80  KDETIAKYTGLS----LPTQTQNFCKVIILDQPPGKGPLDFDWRRLNKVTNVKNQGTCGA 135

Query: 161 CWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYI 220
           CW+F+   +LE  + +   +L++LSEQQ++DCD           D+GCNGGL+++AFE I
Sbjct: 136 CWAFATLASLESQYAIKHNQLINLSEQQMIDCDF---------VDAGCNGGLLHTAFEAI 186

Query: 221 LKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVG 279
           +K GGV+ E DYPY   +      + +K A  V + +  ++  E+++   L   GP+ + 
Sbjct: 187 IKMGGVQLESDYPYEANNNNCRM-NGNKFAVRVKDCYRYVTVYEEKLKDLLRVAGPIPMA 245

Query: 280 INAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGE 339
           I+A  +  Y  GV   Y     L+H VL+VGYG            P+WI KN+WG +WGE
Sbjct: 246 IDAADIVNYKQGV-IRYCFNSGLNHAVLLVGYGVEN-------NIPFWIFKNTWGTDWGE 297

Query: 340 NGYYKICMGRNVCGVDSMVSSVAAIH 365
           +GY+++    N CG+ + ++S+A I+
Sbjct: 298 DGYFRVQQNINACGMRNELASIATIY 323


>gi|394331824|gb|AFN27131.1| cysteine protease [Leishmania tropica]
          Length = 443

 Score =  208 bits (529), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 127/313 (40%), Positives = 166/313 (53%), Gaps = 34/313 (10%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           F  FK  + + Y T  E   R   F+ NL   +  Q  +P A  G+TKF DL+ +EF  +
Sbjct: 38  FEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 113 FLGLNRRLRLPADAQKA------PILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSA 166
           +L  N      A  Q A           + +P   DWR  GAVT VKDQGACGSCW+FSA
Sbjct: 98  YL--NGAAYFAAAKQHAGQHYRKARADLSAVPDAVDWRKKGAVTPVKDQGACGSCWAFSA 155

Query: 167 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK--AG 224
            G++E    L+   L +LSEQQLV CD +         DSGC   LM  AFE++L+   G
Sbjct: 156 VGSIESQWALAGHRLTALSEQQLVSCDDK---------DSGCRARLMLQAFEWLLRNMNG 206

Query: 225 GVEREKDYPYTGTDG--GSCKFDKSKIAAA-VSNFSVISSDEDQMAANLVKHGPLAVGIN 281
            +  E  YPY  + G    C      +  A +  +  I S E  MAA L K+GP+++ ++
Sbjct: 207 TMFTEDSYPYVSSTGYVPECSNSIQLVPGARIDGYMTIESSETVMAAWLAKNGPISIAVD 266

Query: 282 AVWMQTYIGGV--SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGE 339
           A    +Y  GV  SC    G  L+HGVL+VGY  +G       E PYW+IKNSWGENWGE
Sbjct: 267 ASSFMSYQRGVVTSC---AGMPLNHGVLLVGYNRTG-------EVPYWVIKNSWGENWGE 316

Query: 340 NGYYKICMGRNVC 352
           NGY ++ MG N C
Sbjct: 317 NGYVRVTMGVNAC 329


>gi|215401412|ref|YP_002332715.1| cathepsin [Spodoptera litura nucleopolyhedrovirus II]
 gi|209483953|gb|ACI47386.1| cathepsin [Spodoptera litura nucleopolyhedrovirus II]
          Length = 337

 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 114/320 (35%), Positives = 181/320 (56%), Gaps = 23/320 (7%)

Query: 49  AEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSE 108
           A  +F  F ++++K Y T++E  YR+ +F+ N+     +   + +A++ + +F+D+T +E
Sbjct: 36  APLYFEKFIAQYNKKYKTEDEKKYRYNIFRHNMESINHKNSRNDSAIYKINRFADMTKNE 95

Query: 109 FRRQFLGLNRRLRLPADAQKAPIL---PTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFS 165
              +  GL     L A+  +  ++        PT FDWR    VT VKDQG CG+CW+F+
Sbjct: 96  VVIRHTGLASG-ELGANFCETIVVDGPAQRQRPTSFDWRTLNKVTSVKDQGMCGACWAFA 154

Query: 166 ATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGG 225
             GALE  + +    L+ L+EQQLVDCD         S D GC+GGL+++A+E I+  GG
Sbjct: 155 GLGALESQYAIKYDRLIDLAEQQLVDCD---------SVDMGCDGGLIHTAYEQIMHMGG 205

Query: 226 VEREKDYPYTGTDGGSCKFDKSKIAAAV-SNFSVISSDEDQMAANLVKHGPLAVGINAVW 284
           VE+E DYPY   +   C     K AA V S +  +  +E+++   L   GP+A+ ++AV 
Sbjct: 206 VEQEFDYPYRA-ERQPCALKPHKFAAGVRSCYRYVLLNEERLEDLLRYVGPIAIAVDAVD 264

Query: 285 MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYK 344
           +  Y GG+   +     L+H VL+VGYG            P+WIIKNSWG ++GE+GY +
Sbjct: 265 LTDYYGGI-VSFCENNGLNHAVLLVGYGVE-------NNVPFWIIKNSWGSDYGEDGYVR 316

Query: 345 ICMGRNVCGVDSMVSSVAAI 364
           +  G N CG+ + ++S A +
Sbjct: 317 VRRGVNSCGMINELASSAQV 336


>gi|22549430|ref|NP_689203.1| cath gene product [Mamestra configurata NPV-B]
 gi|215401259|ref|YP_002332563.1| cathepsin [Helicoverpa armigera multiple nucleopolyhedrovirus]
 gi|22476609|gb|AAM95015.1| putative cysteine proteinase [Mamestra configurata NPV-B]
 gi|198448759|gb|ACH88549.1| cathepsin [Helicoverpa armigera multiple nucleopolyhedrovirus]
 gi|390165231|gb|AFL64878.1| cathepsin [Mamestra brassicae MNPV]
 gi|401665635|gb|AFP95747.1| putative cysteine proteinase [Mamestra brassicae MNPV]
          Length = 341

 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 116/323 (35%), Positives = 180/323 (55%), Gaps = 35/323 (10%)

Query: 52  HFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRR 111
           +F  F ++++K Y++++E  YR+ +F+ N+     +   + +AV+ + +F+D+T +E   
Sbjct: 43  YFEKFITQYNKQYSSEDEKKYRYNIFRHNIESINAKNSRNDSAVYKINRFADMTKNEV-- 100

Query: 112 QFLGLNRRLRLPADAQKAPILPT--------NDLPTDFDWRDHGAVTGVKDQGACGSCWS 163
               +NR   L +    A    T           P +FDWR++  VT VKDQG CG+CW+
Sbjct: 101 ----VNRHTGLASGDTGANFCETIVVDGPGQRQRPANFDWRNYNKVTSVKDQGMCGACWA 156

Query: 164 FSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA 223
           F+  GALE  + +    L+ L+EQQLVDCD           D GC+GGL+++A+E I+  
Sbjct: 157 FAGLGALESQYAIKYDRLIDLAEQQLVDCDF---------VDMGCDGGLIHTAYEQIMHI 207

Query: 224 GGVEREKDYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKH-GPLAVGIN 281
           GGVE+E DYPY       C     K A  V N +  +   E+++  +L++H GP+A+ ++
Sbjct: 208 GGVEQEYDYPYKAVR-LPCAVKPHKFAVGVRNCYRYVLLSEERL-EDLLRHVGPIAIAVD 265

Query: 282 AVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENG 341
           AV +  Y GGV   +     L+H VL+VGYG            PYW IKNSWG ++GENG
Sbjct: 266 AVDLTDYYGGV-ISFCENNGLNHAVLLVGYGVE-------NNVPYWTIKNSWGPDYGENG 317

Query: 342 YYKICMGRNVCGVDSMVSSVAAI 364
           Y +I  G N CG+ + ++S A I
Sbjct: 318 YVRIRRGVNSCGMINELASSAQI 340


>gi|55740402|gb|AAV63977.1| cathepsin L precursor [Artemia franciscana]
          Length = 338

 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 128/327 (39%), Positives = 176/327 (53%), Gaps = 29/327 (8%)

Query: 45  HLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLL----DPTAVHGVTK 100
           +LL  E H  LFK+   K Y +Q E  +R +++  N  +  +  +L    + +    + K
Sbjct: 25  NLLADEWH--LFKATHKKEYPSQLEEKFRMKIYLENKHKVAKHNILYEKGEKSYQVAMNK 82

Query: 101 FSDLTPSEFRRQFLGLNRRLRLPADAQKAPIL--PTN-DLPTDFDWRDHGAVTGVKDQGA 157
           F DL   EFR    G   + +  + A+       P N ++P   DWR+ GA+T VKDQG 
Sbjct: 83  FGDLLHHEFRSIMNGYQHKKQNSSRAESTFTFMEPANVEVPESVDWREKGAITPVKDQGQ 142

Query: 158 CGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAF 217
           CGSCW+FS+TGALEG  F  TG+L+SLSEQ L+DC  +   E       GCNGGLM+ AF
Sbjct: 143 CGSCWAFSSTGALEGQTFRKTGKLISLSEQNLIDCSGKYGNE-------GCNGGLMDQAF 195

Query: 218 EYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPL 276
           +YI    G++ E  YPY   D   C+++     A    F  + S +ED++ A +   GP+
Sbjct: 196 QYIKDNKGIDTENTYPYEAED-DVCRYNPRNRGAVDRGFVDIPSGEEDKLKAAVATVGPV 254

Query: 277 AVGINAVW--MQTYIGGVSCPYIC-GKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSW 333
           +V I+A     Q Y  GV     C    LDHGVL+VGYGS          K YW++KNSW
Sbjct: 255 SVAIDASHESFQFYSKGVYYEPSCDSDDLDHGVLVVGYGSDN-------GKDYWLVKNSW 307

Query: 334 GENWGENGYYKICMGR-NVCGVDSMVS 359
            E+WG+ GY KI   R N CGV +  S
Sbjct: 308 SEHWGDEGYIKIARNRKNHCGVATAAS 334


>gi|322799749|gb|EFZ20954.1| hypothetical protein SINV_06041 [Solenopsis invicta]
          Length = 337

 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 134/366 (36%), Positives = 193/366 (52%), Gaps = 45/366 (12%)

Query: 6   LSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYA 65
           + S++ LL  +VLA    V                 S + +L+AE  + +FK   +K Y 
Sbjct: 1   MKSVVALLFLAVLAMGQTV-----------------SFNKILDAE--WFIFKLHHNKVYK 41

Query: 66  TQEEHDYRFRVFKANLRRA----KRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLR 121
           +  E  YR +++  N R+     ++ +L + T   G+ K+ D+   EF     G N+ + 
Sbjct: 42  SPVEEGYRMKIYMDNKRKIAEHNRKYELNEVTYKLGMNKYGDMLHHEFVNTLNGFNKSVT 101

Query: 122 LPADAQKAPIL-PTN-DLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTG 179
              + +    + P N  LP + DW   GAVT VKDQG CGSCW+FS+TGALEG HF STG
Sbjct: 102 AGIETEGVTFISPANVKLPDEVDWTKQGAVTAVKDQGHCGSCWAFSSTGALEGQHFRSTG 161

Query: 180 ELVSLSEQQLVDCDHECDPEESGSC-DSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTD 238
            LVSLSEQ L+DC        SG   ++GCNGGLM+ AF+YI    G++ EK YPY   +
Sbjct: 162 YLVSLSEQNLIDC--------SGKYGNNGCNGGLMDYAFQYIKDNKGLDTEKTYPYE-AE 212

Query: 239 GGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSC- 294
              C+++     A    +  +   DE+++ A +   GP++V I+A     Q Y  GV   
Sbjct: 213 NDRCRYNPRNSGATDKGYVDIPQGDEEKLKAAVATIGPISVAIDASHESFQLYSEGVYYD 272

Query: 295 PYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNV-CG 353
           P    + LDHGVLIVGYG+            YW++KNSWG+ WG+ GY K+   +N  CG
Sbjct: 273 PDCSAENLDHGVLIVGYGTD-----ETSGHDYWLVKNSWGKTWGQKGYIKMARNKNNHCG 327

Query: 354 VDSMVS 359
           + S  S
Sbjct: 328 IASSAS 333


>gi|94420703|gb|ABF18679.1| cysteine protease [Medicago sativa]
          Length = 350

 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 135/358 (37%), Positives = 190/358 (53%), Gaps = 33/358 (9%)

Query: 8   SLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHH---FSLFKSKFSKTY 64
           +LL++      A+A     D   IR V  SD E+    ++    H   F+ F +++ K Y
Sbjct: 5   TLLIVFFCVATAAAGLSFHDSNPIRMV--SDMEKQLLQVIGESRHAVSFARFANRYGKRY 62

Query: 65  ATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGL--NRRLRL 122
            T +E   RF++F  NL+  +           GV  F+D T  EFR   LG   N    L
Sbjct: 63  DTVDEMKRRFKIFSENLQLIESTNKKRLGYTLGVNHFADWTWEEFRSHRLGAAQNCSATL 122

Query: 123 PADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELV 182
             + +   ++    LP + DWR  G V+ VKDQG CGSCW+FS TGALE A+  + G+ +
Sbjct: 123 KGNHRITDVV----LPAEKDWRKEGIVSEVKDQGHCGSCWTFSTTGALESAYAQAFGKNI 178

Query: 183 SLSEQQLVDCDHECDPEESGSCDS-GCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGS 241
           SLSEQQLVDC        +G+ ++ GCNGGL + AFEYI   GG+E E+ YPYTG + G 
Sbjct: 179 SLSEQQLVDC--------AGAFNNFGCNGGLPSQAFEYIKYNGGLETEEAYPYTGQN-GP 229

Query: 242 CKFDKSKIAAAV-SNFSVISSDEDQMAANLVKHGPLAVGINAV-WMQTYIGGVSCPYICG 299
           CKF    +A  V  + ++    ED++   +    P++V    V   + Y  GV     CG
Sbjct: 230 CKFTSEDVAVQVLGSVNITLGAEDELKHAVAFARPVSVAFEVVDDFRLYKKGVYTSTTCG 289

Query: 300 KY---LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGV 354
                ++H VL VGYG            PYW+IKNSWG  WG++GY+K+ MG+N+CGV
Sbjct: 290 NTPMDVNHAVLAVGYGIE-------DGVPYWLIKNSWGGEWGDHGYFKMEMGKNMCGV 340


>gi|301769893|ref|XP_002920368.1| PREDICTED: cathepsin L1-like [Ailuropoda melanoleuca]
          Length = 503

 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 123/320 (38%), Positives = 176/320 (55%), Gaps = 22/320 (6%)

Query: 48  NAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH----GVTKFSD 103
           N +  ++ +K+   K Y  ++E  +R  V++ N++   +         H     +  F D
Sbjct: 24  NLDARWTRWKAANGKLY-NKDEEVWRRAVWEKNMKMIDQHNEEYSQGKHSFILAMNAFGD 82

Query: 104 LTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWS 163
           LT  EF++   GL  +++ P +     +LP  + P+  DWR+ G VT VKDQG CGSCW+
Sbjct: 83  LTNEEFKQVMNGL--KIQNPREGNMFQLLPFAETPSSVDWREKGYVTPVKDQGQCGSCWA 140

Query: 164 FSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA 223
           FSATGALEG  F  TG+LVSLSEQ LVDC            ++GCNGGLM++AF Y+   
Sbjct: 141 FSATGALEGQMFRKTGKLVSLSEQNLVDCSR-------AEGNAGCNGGLMDNAFRYVKDN 193

Query: 224 GGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA- 282
           GG++ E+ YPY   D G CK+   + AA  + F+ I  DE+ +  ++   GP++V I+A 
Sbjct: 194 GGLDSEESYPYLAQD-GRCKYKPEQSAANDTGFADIHQDEESLMLSVATVGPISVAIDAS 252

Query: 283 --VWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGEN 340
              +   Y G    P    + LDHGVL+VGYGS        + K YWI+KNSWG  WG  
Sbjct: 253 LDTFRFYYKGIYYDPNCSSEDLDHGVLVVGYGSD---EREAENKNYWIVKNSWGTQWGMQ 309

Query: 341 GYYKICMGR-NVCGVDSMVS 359
           GY  +   R N CG+ +  S
Sbjct: 310 GYILMAKDRGNHCGIATSAS 329



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 6/96 (6%)

Query: 250 AAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSC-PYICGKYLDHGV 306
           AA V+    +   E+ +   +   GP++  I A     Q    G+   P    + LDHGV
Sbjct: 391 AADVTGPVNVPQQEEAVMLAVAAGGPVSAAIRASLGSFQFCKEGIYYDPNCSSEDLDHGV 450

Query: 307 LIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGY 342
           L+VGYGS        + K YWI+KNSWG +WG  GY
Sbjct: 451 LVVGYGSD---EREAENKNYWIVKNSWGTDWGLQGY 483


>gi|74151179|dbj|BAE27712.1| unnamed protein product [Mus musculus]
          Length = 334

 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 126/324 (38%), Positives = 174/324 (53%), Gaps = 24/324 (7%)

Query: 44  DHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHG----VT 99
           D   +AE H   +KS   + Y T EE ++R  +++ N+R  +          HG    + 
Sbjct: 22  DQTFSAEWH--QWKSTHRRLYGTNEE-EWRRAIWEKNMRMIQLHNGEYSNGQHGFSMEMN 78

Query: 100 KFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACG 159
            F D+T  EFR+   G   +        + P++    +P   DWR+ G VT VK+QG CG
Sbjct: 79  AFGDMTNEEFRQVVNGYRHQKHKKGRLFQEPLMLK--IPKSVDWREKGCVTPVKNQGQCG 136

Query: 160 SCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEY 219
           SCW+FSA+G LEG  FL TG+L+SLSEQ LVDC H          + GCNGGLM+ AF+Y
Sbjct: 137 SCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSH-------AQGNQGCNGGLMDFAFQY 189

Query: 220 ILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVG 279
           I + GG++ E+ YPY   D GSCK+      A  + F  I   E+ +   +   GP++V 
Sbjct: 190 IKENGGLDSEESYPYEAKD-GSCKYRAEFAVANDTGFVDIPQQEEALMKAVATVGPISVA 248

Query: 280 INAVW--MQTYIGGVSC-PYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGEN 336
           ++A    +Q Y  G+   P    K LDHGVL+VGYG  G    + K   YW++KNSWG  
Sbjct: 249 MDASHPSLQFYSSGIYYEPNCSSKNLDHGVLLVGYGYEGTDSNKNK---YWLVKNSWGSE 305

Query: 337 WGENGYYKICMGR-NVCGVDSMVS 359
           WG  GY KI   R N CG+ +  S
Sbjct: 306 WGMEGYIKIAKDRDNHCGLATAAS 329


>gi|410898132|ref|XP_003962552.1| PREDICTED: cathepsin L-like [Takifugu rubripes]
          Length = 335

 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 129/325 (39%), Positives = 175/325 (53%), Gaps = 32/325 (9%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH----GVTKFSDLT 105
           E  F  +K KF ++Y T  E   R +++  N +      +L    +     G+T+F+D+ 
Sbjct: 24  EMEFHAWKLKFGRSYRTPSEEVQRMQIWLNNRKLVLVHNILADQGIKSYRLGMTQFADMD 83

Query: 106 PSEFRRQF-LGLNRRLRLPADAQKAPILPTND---LPTDFDWRDHGAVTGVKDQGACGSC 161
             E++    LG  R     A  + +      +   LPT  DWRD G VTGVKDQ  CGSC
Sbjct: 84  NEEYKSLISLGCLRAFNTSAPRRGSAFFRLAEGTHLPTTVDWRDKGYVTGVKDQKQCGSC 143

Query: 162 WSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYIL 221
           W+FSATG+LEG +F  TG+LVSLSEQQLVDC  +         + GCNGGLM+ AF+YI 
Sbjct: 144 WAFSATGSLEGQNFRKTGKLVSLSEQQLVDCSGDYG-------NMGCNGGLMDYAFKYIQ 196

Query: 222 KAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVGI 280
           + GG++ EK YPY   D G C+F    + A  + +  V   DED +   +   GP++VGI
Sbjct: 197 ENGGIDTEKSYPYEAED-GQCRFKPENVGAKCTGYVDVTVGDEDALKEAVATIGPVSVGI 255

Query: 281 NAVW--MQTYIGGVSCPYIC-GKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENW 337
           +A     Q Y  GV     C  + LDHGVL VGYG+          + YW++KNSWG  W
Sbjct: 256 DASHSSFQLYDSGVYDEQDCSSQDLDHGVLAVGYGTD-------NGQDYWLVKNSWGLGW 308

Query: 338 GENGYYKICMGR---NVCGVDSMVS 359
           G+ GY  I M R   N CG+ +  S
Sbjct: 309 GQEGY--IMMSRNKDNQCGIATAAS 331


>gi|312381833|gb|EFR27483.1| hypothetical protein AND_05794 [Anopheles darlingi]
          Length = 344

 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 144/371 (38%), Positives = 190/371 (51%), Gaps = 54/371 (14%)

Query: 10  LLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEE 69
           L LLL S LA+A AV+     I  +V  +              ++ FK +  K Y ++ E
Sbjct: 3   LFLLLVSFLAAANAVS-----IFNLVKEE--------------WNAFKLQHRKKYDSESE 43

Query: 70  HDYRFRVFKANLRR-AKRRQLLDPTAVH---GVTKFSDLTPSEFRRQFLGLNRRL----R 121
              R +++  N  + AK  Q  D         V K++DL   EF     G NR      +
Sbjct: 44  ERIRMKIYVQNKHKIAKHNQRYDLGQEKFRLRVNKYADLLHEEFVHTLNGFNRSAAAGSK 103

Query: 122 LPADAQ----KAPIL---PTN-DLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGA 173
           L    Q    + PI    P N D+PT  DWR+ GAVT VKDQG CGSCWSFSATGALEG 
Sbjct: 104 LLGREQLMTIEEPITWIEPANVDVPTTIDWREKGAVTPVKDQGHCGSCWSFSATGALEGQ 163

Query: 174 HFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYP 233
           HF  TG+LVSLSEQ LVDC        +   ++GCNGGLM++AF+Y+    G++ EK YP
Sbjct: 164 HFRKTGKLVSLSEQNLVDCS-------TKYGNNGCNGGLMDNAFQYVKDNKGIDTEKAYP 216

Query: 234 YTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIG 290
           Y   D   C ++   I A    F  +   DE  +   L   GP++V I+A     Q Y  
Sbjct: 217 YEAID-DECHYNPKAIGATDKGFVDIPQGDEKALKKALATVGPVSVAIDASHESFQFYSE 275

Query: 291 GVSCPYIC-GKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR 349
           GV     C  + LDHGVL VGYG++         + YW++KNSWG  WG+ GY K+   R
Sbjct: 276 GVYYEPQCDSEQLDHGVLAVGYGTTEDG------EDYWLVKNSWGTTWGDQGYVKMARNR 329

Query: 350 -NVCGVDSMVS 359
            N CG+ +  S
Sbjct: 330 ENHCGIATTAS 340


>gi|2804266|dbj|BAA24444.1| cysteine proteinase [Sitophilus zeamais]
          Length = 331

 Score =  207 bits (528), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 142/363 (39%), Positives = 193/363 (53%), Gaps = 50/363 (13%)

Query: 10  LLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEE 69
           LLL+L++V+ S  AV+  D +  Q                   +S FK + SK Y ++ E
Sbjct: 3   LLLILAAVVISCQAVSFYDLVQEQ-------------------WSSFKMQHSKNYDSETE 43

Query: 70  HDYRFRVFKANLRR-AKRRQLLDPTAVH---GVTKFSDLTPSEFRRQFLGLNR---RLRL 122
             +R ++F  N  + AK  +L     V    G+ K++D+   EF     G N+    +  
Sbjct: 44  ERFRMKIFMENDHKVAKHSKLFSQGFVKFKLGLNKYADMLHHEFVSTLNGFNKTKNNILK 103

Query: 123 PADAQKAP--ILPTN-DLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTG 179
            +D   A   I P N  LP   DWRD GAVT VKDQG CGSCWSFS +G+LEG HF  TG
Sbjct: 104 GSDLNDAVRFISPANVKLPDTVDWRDKGAVTKVKDQGHCGSCWSFSGSGSLEGQHFRKTG 163

Query: 180 ELVSLSEQQLVDCDHECDPEESGSC-DSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTD 238
           +LVSLSEQ LVDC        SG   ++GCNGGLM++AF YI   GG++ E+ YPY   D
Sbjct: 164 KLVSLSEQNLVDC--------SGRYGNTGCNGGLMDNAFRYIKDNGGIDTEQSYPYLAED 215

Query: 239 GGSCKFDKSKIAAAVSNFSVISS-DEDQMAANLVKHGPLAVGINAVW--MQTYIGGV-SC 294
              C +      A    F  I   +ED + A +   GP+++ I+A +   Q Y  GV S 
Sbjct: 216 -EKCHYKTQNSGATDKGFVDIEEGNEDDLKAAVATVGPVSIAIDASYETFQLYSDGVYSD 274

Query: 295 PYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCG 353
           P    + LDHGVL+VGYG+S         + YW++KNSW  + G NGY K+   + N+CG
Sbjct: 275 PECSSQELDHGVLVVGYGTSDDG------QDYWLVKNSWRPSCGLNGYIKMARNQDNMCG 328

Query: 354 VDS 356
           V S
Sbjct: 329 VAS 331


>gi|242088413|ref|XP_002440039.1| hypothetical protein SORBIDRAFT_09g024940 [Sorghum bicolor]
 gi|241945324|gb|EES18469.1| hypothetical protein SORBIDRAFT_09g024940 [Sorghum bicolor]
          Length = 463

 Score =  207 bits (528), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 132/339 (38%), Positives = 176/339 (51%), Gaps = 53/339 (15%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQL---------LDPTAVHGVTK 100
           E  F  + ++  K YAT EE   R  VF  N                    P+    +  
Sbjct: 38  EALFDAWCAEHGKAYATPEERAARLAVFADNAAFVAAHNARVNAAGGGGAPPSYTLALNA 97

Query: 101 FSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPT--------NDLPTDFDWRDHGAVTGV 152
           F+DLT  EFR   LG   R+   A A ++P  P           +P   DWR++GAVT V
Sbjct: 98  FADLTHEEFRAARLG---RIAAGAAALRSPAAPVYRGLDGGLGAVPDALDWRENGAVTKV 154

Query: 153 KDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGL 212
           KDQG+CG+CWSFSATGA+EG + + TG LVSLSEQ+L+DCD         S +SGC GGL
Sbjct: 155 KDQGSCGACWSFSATGAMEGINKIKTGSLVSLSEQELIDCDR--------SYNSGCGGGL 206

Query: 213 MNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVK 272
           M+ A+++++K GG++ E+DYPY   DG   K    K    +  +S + S+++ +    V 
Sbjct: 207 MDYAYKFVVKNGGIDTEEDYPYREADGTCNKNKLKKRIVTIDGYSDVPSNKEDLLLQAVA 266

Query: 273 HGPLAVGINA------VWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPY 326
             P++VGI        ++ Q  I    CP      LDH VLIVGYGS G        K Y
Sbjct: 267 QQPVSVGICGSARAFQLYSQQGIFDGPCP----TSLDHAVLIVGYGSEG-------GKDY 315

Query: 327 WIIKNSWGENWGENGYYKICMGRN------VCGVDSMVS 359
           WI+KNSWGE+WG  GY    M RN      VCG++ M S
Sbjct: 316 WIVKNSWGESWGMKGYMH--MHRNTGDSKGVCGINMMAS 352


>gi|281200606|gb|EFA74824.1| cysteine proteinase 5 precursor [Polysphondylium pallidum PN500]
          Length = 307

 Score =  207 bits (528), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 120/303 (39%), Positives = 167/303 (55%), Gaps = 17/303 (5%)

Query: 66  TQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLN---RRLRL 122
           T +E   RF +FK N+    +      + V G+   +D++  E++R +LG +    + R 
Sbjct: 9   TAQEFGTRFNIFKKNMDFVHKWNAKGSSTVLGLNSMADISNEEYQRVYLGTHIDASQFRQ 68

Query: 123 PADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELV 182
            A + K           + DWR  GAVT +K+QG CGSCWSFS TG+ EGAHF+ TG LV
Sbjct: 69  QAASHKLG-RTFKVQAANVDWRAKGAVTPIKNQGQCGSCWSFSTTGSTEGAHFIKTGNLV 127

Query: 183 SLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSC 242
           SLSEQ L+DC     PE     + GCNGGLM +AFEYI+K  G++ E  YPY   DG  C
Sbjct: 128 SLSEQNLMDCS---KPEG----NQGCNGGLMTAAFEYIIKNNGIDTESSYPYKAEDGKKC 180

Query: 243 KFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGK 300
            ++ +  AA +S++  +++  +   A     GP++V I+A     Q Y  GV     C +
Sbjct: 181 LYNPANSAATLSSYVNVTTGSESDLAVKSGLGPVSVAIDASHNSFQLYSSGVYYEPKCSQ 240

Query: 301 -YLDHGVLIVGYGSSGF--APIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDS 356
             LDHGVL+VGYGS     A +      +WI+KNSWG  WG  GY  +   R N CG+ +
Sbjct: 241 TQLDHGVLVVGYGSDALPSAGVSAGSGDWWIVKNSWGTTWGVEGYIYMSRNRNNNCGIAT 300

Query: 357 MVS 359
           M S
Sbjct: 301 MAS 303


>gi|7381610|gb|AAF61565.1|AF227957_1 cathepsin L-like proteinase precursor [Rhipicephalus microplus]
          Length = 332

 Score =  207 bits (528), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 134/321 (41%), Positives = 168/321 (52%), Gaps = 31/321 (9%)

Query: 52  HFSLFKSKFSKTYATQEEHDYRFRVFKAN-LRRAKRRQLLDPTAVH---GVTKFSDLTPS 107
            +  FK+   K+Y +  E   RF++F  N L  AK         V    G+ +F DL   
Sbjct: 26  QWEAFKTTHKKSYQSHMEELLRFKIFTENSLIIAKHNAKYAKGLVSYKLGMNQFGDLLAH 85

Query: 108 EFRRQFLGLNRRLRLPADAQKAPILPTND--LPTDFDWRDHGAVTGVKDQGACGSCWSFS 165
           EF R F G +   R    +   P    ND  LP   DWR  GAVT VKDQG CGSCW+FS
Sbjct: 86  EFARIFNG-HHGTRKTGGSTFLPPANVNDSSLPKVVDWRKKGAVTPVKDQGQCGSCWAFS 144

Query: 166 ATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGG 225
           ATG+LEG HFL  GELVSLSEQ LVDC            ++GC GGLM  AF+YI    G
Sbjct: 145 ATGSLEGQHFLKNGELVSLSEQNLVDCSQSFG-------NNGCEGGLMEDAFKYIKANDG 197

Query: 226 VEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISS-DEDQMAANLVKHGPLAVGINAVW 284
           ++ EK YPY   D G C+F K  + A  + +  I +  E  +   +   GP++V I+A  
Sbjct: 198 IDTEKSYPYEAVD-GECRFKKEDVGATDTGYVEIKAGSEVDLKKAVATVGPISVAIDASH 256

Query: 285 --MQTYIGGV-SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENG 341
              Q Y  GV   P    + LDHGVL+VGYG  G        K YW++KNSW E+WG+ G
Sbjct: 257 SSFQLYSEGVYDEPECSSEDLDHGVLVVGYGVKG-------GKKYWLVKNSWAESWGDQG 309

Query: 342 YYKICMGR---NVCGVDSMVS 359
           Y  I M R   N CG+ S  S
Sbjct: 310 Y--ILMSRDNNNQCGIASQAS 328


>gi|94448674|emb|CAI91575.1| cathepsin L2 [Lubomirskia baicalensis]
          Length = 324

 Score =  207 bits (528), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 124/316 (39%), Positives = 172/316 (54%), Gaps = 32/316 (10%)

Query: 56  FKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVT----KFSDLTPSEFRR 111
           +K++  K+Y   +E   R   ++AN +            V G T    +F DL  SEF+ 
Sbjct: 25  WKAEHGKSYRNHKEEMLRHVTWQANKKYIDEHN--QHAGVFGYTLKMNQFGDLENSEFKS 82

Query: 112 QFLGLNRRLRLPADAQKAPILP---TNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATG 168
            + G  R    P   +  P +P     DLP   DW   G VT VK+QG CGSCWSFSATG
Sbjct: 83  LYNGY-RMSNAPRKGK--PFVPAARVQDLPASVDWSKKGWVTPVKNQGQCGSCWSFSATG 139

Query: 169 ALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVER 228
           ++EG HF +TG L+SLSEQ LVDC        +   + GCNGGLM+ AFEY++K  G++ 
Sbjct: 140 SMEGQHFNATGTLMSLSEQNLVDC-------SAAEGNHGCNGGLMDDAFEYVIKNNGIDT 192

Query: 229 EKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSD-EDQMAANLVKHGPLAVGINA--VWM 285
           E  YPY   D  +CKF+ + + A +S +  ++ D E  +   +   GP++V I+A  +  
Sbjct: 193 EASYPYRAVD-STCKFNTADVGATISGYVDVTKDSESDLQVAVATIGPVSVAIDASHISF 251

Query: 286 QTYIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYK 344
           Q Y  GV  P IC    LDHGVL VGYG+ G        K YW++KNSWG +WG +GY +
Sbjct: 252 QFYSSGVYDPLICSSTNLDHGVLAVGYGTDG-------SKDYWLVKNSWGASWGMSGYIE 304

Query: 345 ICMGR-NVCGVDSMVS 359
           +     N CG+ +  S
Sbjct: 305 MVRNHNNKCGIATSAS 320


>gi|388513209|gb|AFK44666.1| unknown [Lotus japonicus]
 gi|388514955|gb|AFK45539.1| unknown [Lotus japonicus]
          Length = 352

 Score =  207 bits (528), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 132/343 (38%), Positives = 181/343 (52%), Gaps = 29/343 (8%)

Query: 26  DDDAMIRQVVPSDGEQSEDHLLNAEHH---FSLFKSKFSKTYATQEEHDYRFRVFKANLR 82
           +D   IR V  SD E+    ++    H   F+ F SK+ K Y + EE  +RFR+F  NL 
Sbjct: 25  EDSNPIRLV--SDLEEQVLQVIGQTRHAVSFARFASKYGKRYDSVEEIQHRFRIFSENLE 82

Query: 83  RAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFD 142
             K       +   G+  F+DL+  EFR Q LG  +             L    LP + D
Sbjct: 83  LIKSTNKKRLSYKLGLNHFADLSWDEFRTQKLGAAQNCSATLIGNHK--LTDAVLPAEKD 140

Query: 143 WRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESG 202
           WR    V+ VKDQ  CGSCW+FS TGALE A+  + G+ +SLSEQQLVDC        +G
Sbjct: 141 WRKESIVSEVKDQAHCGSCWTFSTTGALEAAYAQAHGKNISLSEQQLVDC--------AG 192

Query: 203 SCDS-GCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAV-SNFSVIS 260
           + ++ GCNGGL + AFEYI   GG+  EK+YPYT  D  +CKF    +A  V  + ++  
Sbjct: 193 AFNNFGCNGGLPSQAFEYIKYNGGIALEKEYPYTAKD-EACKFTAENVAVRVLDSVNITL 251

Query: 261 SDEDQMAANLVKHGPLAVGINAV-WMQTYIGGVSCPYICGKY---LDHGVLIVGYGSSGF 316
             ED++   +    P++V    V   + Y  GV     CG     ++H VL VGYG    
Sbjct: 252 GAEDELKHAVAFARPVSVAFQVVDGFRLYKEGVYTSDTCGNTPMDVNHAVLAVGYGVE-- 309

Query: 317 APIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVS 359
                   PYWIIKNSWG  WG++GY+K+ +G+N+CGV +  S
Sbjct: 310 -----NNVPYWIIKNSWGSTWGDHGYFKMELGKNMCGVATCAS 347


>gi|55735421|gb|AAV59468.1| cathepsin [Bombyx mori NPV]
          Length = 323

 Score =  207 bits (528), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 115/325 (35%), Positives = 181/325 (55%), Gaps = 29/325 (8%)

Query: 47  LNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTP 106
           L A ++F  F  +F+K Y+++ E   RF++F+ NL     +   D +A + + KFSDL+ 
Sbjct: 22  LKAPNYFEEFVHRFNKNYSSEVEKLRRFKIFQHNLNEIINKNQND-SAKYEINKFSDLSK 80

Query: 107 SEFRRQFLGLNRRLRLPADAQ---KAPIL--PTNDLPTDFDWRDHGAVTGVKDQGACGSC 161
            E   ++ GL+    LP   Q   K  +L  P    P +FDWR    VT VK+QG CG+C
Sbjct: 81  DETIAKYTGLS----LPTQTQNFCKVILLDQPPGKGPLEFDWRRLNKVTSVKNQGMCGAC 136

Query: 162 WSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYIL 221
           W+F+   +LE    +   +L++LSEQQ++DCD           D+GCNGGL+++AFE I+
Sbjct: 137 WAFATLASLESQFAIKHNQLINLSEQQMIDCDF---------VDAGCNGGLLHTAFEAII 187

Query: 222 KAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVGI 280
           K GGV+ E DYPY   D  +C+ + +K    V + +  I+  E+++   L   GP+ + I
Sbjct: 188 KMGGVQLESDYPYEA-DNNNCRMNSNKFLVQVKDCYRYITVYEEKLKDLLRLVGPIPMAI 246

Query: 281 NAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGEN 340
           +A  +  Y  G+   Y     L+H VL+VGYG            PYW  KN+WG +WGE+
Sbjct: 247 DAADIVNYKQGI-IKYCFDSGLNHAVLLVGYGVEN-------NIPYWTFKNTWGTDWGED 298

Query: 341 GYYKICMGRNVCGVDSMVSSVAAIH 365
           G++++    N CG+ + ++S A I+
Sbjct: 299 GFFRVQQNINACGMRNELASTAVIY 323


>gi|148224022|ref|NP_001087489.1| cathepsin L2 precursor [Xenopus laevis]
 gi|51258284|gb|AAH80004.1| MGC81823 protein [Xenopus laevis]
          Length = 335

 Score =  207 bits (527), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 125/317 (39%), Positives = 169/317 (53%), Gaps = 22/317 (6%)

Query: 52  HFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH----GVTKFSDLTPS 107
           H+ L+K+   K+Y  +EE  +R  +++ NLR  +   L      H    G+ +F D+T  
Sbjct: 28  HWHLWKNWHKKSYLPKEE-GWRRVLWEKNLRTIEFHNLDHSLGKHSYRLGMNQFGDMTNE 86

Query: 108 EFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSAT 167
           EFR+   G   +  +      AP     + P   DWR+ G VT VKDQG CGSCW+FS T
Sbjct: 87  EFRQLMNGYKNQKMIKGSTFLAP--NNFEAPKTVDWREKGYVTPVKDQGQCGSCWAFSTT 144

Query: 168 GALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVE 227
           GALEG H+   G+L+SLSEQ LVDC            + GCNGGLM+ AF+Y+   GG++
Sbjct: 145 GALEGQHYRKAGKLISLSEQNLVDC-------SRAQGNQGCNGGLMDQAFQYVKDNGGID 197

Query: 228 REKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVGINA--VW 284
            E  YPYT  D   C +D +  +A  + F  V S  E  +   +   GP++V ++A    
Sbjct: 198 SEDSYPYTAKDDQECHYDPNYNSANDTGFVDVPSGSEKDLMKAVASVGPVSVAVDAGHKS 257

Query: 285 MQTYIGGVSC-PYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYY 343
            Q Y  G+   P    + LDHGVL+VGY   GF       K YWI+KNSW E WG NGY 
Sbjct: 258 FQFYQSGIYYDPECSSEDLDHGVLVVGY---GFEGEDVDGKRYWIVKNSWSEKWGNNGYI 314

Query: 344 KICMGR-NVCGVDSMVS 359
           KI   R N CG+ +  S
Sbjct: 315 KIAKDRHNHCGIATAAS 331


>gi|299507656|gb|ADJ21807.1| cathepsin L [Oplegnathus fasciatus]
          Length = 336

 Score =  207 bits (527), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 130/321 (40%), Positives = 174/321 (54%), Gaps = 24/321 (7%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH----GVTKFSDLT 105
           + H+ L+KS  +K Y  +EE  +R  V++ NL++ +   L      H    G+  F D+T
Sbjct: 25  DEHWDLWKSWHTKKYHEKEE-GWRRMVWEKNLKKIELHNLEHSMGEHTYRLGMNHFGDMT 83

Query: 106 PSEFRRQFLGLNRRLRLPADAQKAPILPTNDL--PTDFDWRDHGAVTGVKDQGACGSCWS 163
             EFR+   G  R+       + +  +  N L  P   DWRD+G VT VKDQG CGSCW+
Sbjct: 84  HEEFRQIMNGYKRKSE--RKFKGSLFMEPNFLEAPRSVDWRDNGYVTPVKDQGQCGSCWA 141

Query: 164 FSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA 223
           FS TGA+EG HF  TG+LVSLSEQ LVDC     PE     + GCNGGLM+ AF+YI   
Sbjct: 142 FSTTGAMEGQHFRKTGKLVSLSEQNLVDCSR---PE----GNEGCNGGLMDQAFQYIKDN 194

Query: 224 GGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVGINA 282
            G++ E  YPY GTD   C +D    +A  + F  + S  E  +   +   GP++V I+A
Sbjct: 195 QGLDSEDSYPYLGTDDQPCHYDPKYNSANDTGFIDIPSGKERALMKAVAAVGPVSVAIDA 254

Query: 283 --VWMQTYIGGVSCPYIC-GKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGE 339
                Q Y  G+     C  + LDHGVL+VGY   GF       K YWI+KNSW E WG+
Sbjct: 255 GHESFQFYQSGIYYEKECSSEELDHGVLVVGY---GFEGEDVDGKKYWIVKNSWSEKWGD 311

Query: 340 NGYYKICMGR-NVCGVDSMVS 359
            GY  +   R N CG+ +  S
Sbjct: 312 KGYIYMAKDRKNHCGIATAAS 332


>gi|109939734|sp|P25776.2|ORYA_ORYSJ RecName: Full=Oryzain alpha chain; Flags: Precursor
 gi|78192122|gb|ABB30151.1| oryzain alpha [Oryza sativa Japonica Group]
          Length = 458

 Score =  207 bits (527), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 121/324 (37%), Positives = 176/324 (54%), Gaps = 28/324 (8%)

Query: 35  VPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTA 94
           + S GE+SE+    A   ++ +K++  K+Y    E + R+  F+ NLR            
Sbjct: 25  IVSYGERSEEE---ARRLYAEWKAEHGKSYNAVGEEERRYAAFRDNLRYIDEHNAAADAG 81

Query: 95  VH----GVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTND-LPTDFDWRDHGAV 149
           VH    G+ +F+DLT  E+R  +LGL  + R         +   N+ LP   DWR  GAV
Sbjct: 82  VHSFRLGLNRFADLTNEEYRDTYLGLRNKPRRERKVSDRYLAADNEALPESVDWRTKGAV 141

Query: 150 TGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCN 209
             +KDQG CGSCW+FSA  A+EG + + TG+L+SLSEQ+LVDCD         S + GCN
Sbjct: 142 AEIKDQGGCGSCWAFSAIAAVEGINQIVTGDLISLSEQELVDCDT--------SYNEGCN 193

Query: 210 GGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAAN 269
           GGLM+ AF++I+  GG++ E DYPY G D       K+     + ++  ++ + +     
Sbjct: 194 GGLMDYAFDFIINNGGIDTEDDYPYKGKDERCDVNRKNAKVVTIDSYEDVTPNSETSLQK 253

Query: 270 LVKHGPLAVGINA--VWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYW 327
            V + P++V I A     Q Y  G+     CG  LDHGV  VGYG+          K YW
Sbjct: 254 AVANQPVSVAIEAGGRAFQLYSSGIFTG-KCGTALDHGVAAVGYGTE-------NGKDYW 305

Query: 328 IIKNSWGENWGENGYYKICMGRNV 351
           I++NSWG++WGE+GY +  M RN+
Sbjct: 306 IVRNSWGKSWGESGYVR--MERNI 327


>gi|37780041|gb|AAP32193.1| cysteine protease 14 [Trifolium repens]
          Length = 351

 Score =  207 bits (527), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 136/364 (37%), Positives = 192/364 (52%), Gaps = 35/364 (9%)

Query: 7   SSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYAT 66
           S  L+L  S  L  ++A   D +++     S+  +S D L+     F  + S+  K Y T
Sbjct: 6   SKTLVLTCSLCLFLSLAFGRDFSIVG--YSSEDLKSMDKLIEL---FESWMSRHGKIYET 60

Query: 67  QEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRL--RLPA 124
            EE   RF VFK NL+    R  +      G+ +F+DL+  EF+ ++LGL   L  R  +
Sbjct: 61  IEEKLLRFEVFKDNLKHIDERNKIVSNYWLGLNEFADLSHQEFKNKYLGLKVNLSQRRES 120

Query: 125 DAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSL 184
             ++       DLP   DWR  GAVT VK+QG CGSCW+FS   A+EG + + TG L SL
Sbjct: 121 SNEEEFTYRDVDLPKSVDWRKKGAVTPVKNQGQCGSCWAFSTVAAVEGINQIVTGNLTSL 180

Query: 185 SEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKF 244
           SEQ+L+DCD         + ++GCNGGLM+ AF +I++ GG+ +E DYPY   +  +C+ 
Sbjct: 181 SEQELIDCD--------TTYNNGCNGGLMDYAFSFIVQNGGLHKEDDYPYI-MEESTCEM 231

Query: 245 DKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKY 301
            K +      N +  +  + +Q     + + PL+V I A     Q Y GGV   + CG  
Sbjct: 232 KKEETQVVTINGYHDVPQNNEQSLLKALANQPLSVAIEASSRDFQFYSGGVFDGH-CGSD 290

Query: 302 LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRN------VCGVD 355
           LDHGV  VGYG+S       K   Y I+KNSWG  WGE G+  I M RN      +CG+ 
Sbjct: 291 LDHGVSAVGYGTS-------KNLDYIIVKNSWGAKWGEKGF--IRMKRNIGKPEGICGLY 341

Query: 356 SMVS 359
            M S
Sbjct: 342 KMAS 345


>gi|23577865|ref|NP_703114.1| viral cathepsin [Rachiplusia ou MNPV]
 gi|37077115|sp|Q8B9D5.1|CATV_NPVR1 RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|23476510|gb|AAN28057.1| viral cathepsin [Rachiplusia ou MNPV]
          Length = 323

 Score =  207 bits (527), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 116/326 (35%), Positives = 180/326 (55%), Gaps = 29/326 (8%)

Query: 46  LLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLT 105
           LL A ++F  F  +F+K Y ++ E   RF++F+ NL     +   D +A + + KFSDL+
Sbjct: 21  LLKAPNYFEEFVHRFNKDYGSEVEKLRRFKIFQHNLNEIIIKNQND-SAKYEINKFSDLS 79

Query: 106 PSEFRRQFLGLNRRLRLPADAQ---KAPIL--PTNDLPTDFDWRDHGAVTGVKDQGACGS 160
             E   ++ GL+    LP   Q   K  +L  P    P +FDWR    VT VK+QG CG+
Sbjct: 80  KDETIAKYTGLS----LPIQTQNFCKVIVLDQPPGKGPLEFDWRRLNKVTSVKNQGMCGA 135

Query: 161 CWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYI 220
           CW+F+   +LE    +   +L++LSEQQ++DCD           D+GCNGGL+++AFE I
Sbjct: 136 CWAFATLASLESQFAIKHNQLINLSEQQMIDCDF---------VDAGCNGGLLHTAFEAI 186

Query: 221 LKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVG 279
           +K GGV+ E DYPY   D  +C+ + +K    V + +  I+  E+++   L   GP+ + 
Sbjct: 187 IKMGGVQLESDYPYEA-DNNNCRMNTNKFLVQVKDCYRYITVYEEKLKDLLRLVGPIPMA 245

Query: 280 INAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGE 339
           I+A  +  Y  G+   Y     L+H VL+VGYG            PYW  KN+WG +WGE
Sbjct: 246 IDAADIVNYKQGI-IKYCFNSGLNHAVLLVGYGVEN-------NIPYWTFKNTWGTDWGE 297

Query: 340 NGYYKICMGRNVCGVDSMVSSVAAIH 365
            G++++    N CG+ + ++S A I+
Sbjct: 298 EGFFRVQQNINACGMRNELASTAVIY 323


>gi|327358519|gb|AEA51106.1| cathepsin F, partial [Oryzias melastigma]
          Length = 255

 Score =  207 bits (527), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 121/267 (45%), Positives = 160/267 (59%), Gaps = 22/267 (8%)

Query: 99  TKFSDLTPSEFRRQFLG-LNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGA 157
           TKFSDLT  EF   +L  L  +  L  + + AP   +    + +DWRDHGAV+ VK+QG 
Sbjct: 4   TKFSDLTEEEFHSAYLNPLLSQWTLHREMKPAPPAKSPAPDS-WDWRDHGAVSPVKNQGM 62

Query: 158 CGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAF 217
           CGSCW+FS TG +EG  FL  G L+SLSEQ+LVDCD           D  C GGL ++A+
Sbjct: 63  CGSCWAFSVTGNIEGQWFLKNGTLLSLSEQELVDCD---------GLDQACRGGLPSNAY 113

Query: 218 EYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLA 277
           E I K GG+E E DY YTG     C F   K+AA +++   +  DE ++AA L ++GP++
Sbjct: 114 EAIEKLGGLETETDYSYTGKK-QRCDFTNRKVAAYINSSVELPKDEKEIAAWLAENGPIS 172

Query: 278 VGINAVWMQTYIGGVSCPY--ICGKYL-DHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWG 334
           V +NA  MQ Y  GVS P+   C  ++ DH VL+VGYG            P+W IKNSWG
Sbjct: 173 VALNAFAMQFYKKGVSHPWKIFCNPWMIDHAVLLVGYGER-------NGIPFWAIKNSWG 225

Query: 335 ENWGENGYYKICMGRNVCGVDSMVSSV 361
           E++GE GYY +  G N CG++ M SS 
Sbjct: 226 EDYGEQGYYYLHRGSNACGINKMGSSA 252


>gi|449469929|ref|XP_004152671.1| PREDICTED: cysteine proteinase RD21a-like [Cucumis sativus]
 gi|449529596|ref|XP_004171784.1| PREDICTED: cysteine proteinase RD21a-like [Cucumis sativus]
          Length = 431

 Score =  207 bits (527), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 130/325 (40%), Positives = 182/325 (56%), Gaps = 35/325 (10%)

Query: 48  NAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTA-VHGVTKFSDLTP 106
           N    F ++ ++  K+Y++ EE  YR  VF  N         LD ++    +  ++DLT 
Sbjct: 24  NVSELFEIWCTEHGKSYSSAEEKLYRLGVFADNYEFVTHHNNLDNSSYTLSLNSYADLTH 83

Query: 107 SEFRRQFLGLNRRLR--LPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSF 164
            EF+   LG +  LR   P   Q+ P LP  D+P   DWR  GAVT VKDQG+CG+CWSF
Sbjct: 84  HEFKVSRLGFSPALRNFRPVLPQE-PSLP-RDVPDSLDWRKKGAVTAVKDQGSCGACWSF 141

Query: 165 SATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAG 224
           SATGA+EG + + TG L+SLSEQ+L+DCD         S +SGC GGLM+ A+++++   
Sbjct: 142 SATGAMEGINQIMTGSLISLSEQELIDCDR--------SYNSGCGGGLMDYAYQFVISNH 193

Query: 225 GVEREKDYPYTGTDGGSCKFDK-SKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGI--N 281
           G++ E DYPY   D GSC+ DK  +    +  ++ I S+++      V   P++VGI  +
Sbjct: 194 GIDTENDYPYQARD-GSCRKDKLQRNVVTIDGYADIPSNDEGKLLQAVAAQPVSVGICGS 252

Query: 282 AVWMQTYIGGV-SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGEN 340
               Q Y  G+ S P  C   LDH VLIVGYGS            YWI+KNSWG++WG +
Sbjct: 253 ERAFQLYSKGIFSGP--CSTSLDHAVLIVGYGSENGV-------DYWIVKNSWGKSWGMD 303

Query: 341 GYYKICMGRN------VCGVDSMVS 359
           GY    M RN      VCG++ + S
Sbjct: 304 GYMH--MQRNSGNSEGVCGINKLAS 326


>gi|302764466|ref|XP_002965654.1| hypothetical protein SELMODRAFT_230713 [Selaginella moellendorffii]
 gi|300166468|gb|EFJ33074.1| hypothetical protein SELMODRAFT_230713 [Selaginella moellendorffii]
          Length = 345

 Score =  207 bits (527), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 126/309 (40%), Positives = 171/309 (55%), Gaps = 41/309 (13%)

Query: 62  KTYATQEEHDYRFRVFKANL--------RRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQF 113
           K Y +  E+  RF++FK N+        RR     L       G+ KF+DLT SEFR  +
Sbjct: 47  KAYNSAHEYKKRFQIFKENVNYINSHNARRNNSHSL-------GLNKFADLTNSEFRGLY 99

Query: 114 LGLNRRLRLPADAQK-APILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEG 172
           +G   RL+ PA   +   I    D  T  DWR  G VT +KDQG CGSCW+FSA  A+EG
Sbjct: 100 VG---RLQRPAPFHEVGDIALVADTATSVDWRKKGGVTEIKDQGDCGSCWAFSAVAAVEG 156

Query: 173 AHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDY 232
             FLSTG LVSLSEQ+LVDCD         + + GC+GG+M+ AF+Y+++ GG+  + +Y
Sbjct: 157 LTFLSTGTLVSLSEQELVDCDT--------TVNQGCDGGIMDYAFQYMIRNGGITSQSNY 208

Query: 233 PYTGTDGGSCKFDKSKI-AAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYI 289
           PY     G+C  DK K  AA ++ F  I    +++    V + P++V I A     Q Y 
Sbjct: 209 PYRALR-GACDKDKVKYHAATINGFQAIPPQSEELLLRAVANQPVSVAIEAGGQDFQLYS 267

Query: 290 GGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICM-- 347
            GV     CG  LDHGV IVGYG+          + YW++KNSWG  WGE+GY ++    
Sbjct: 268 SGVFTGE-CGSNLDHGVAIVGYGTDAGG------RQYWLVKNSWGSGWGESGYVRMERQG 320

Query: 348 -GRNVCGVD 355
            G  VCG++
Sbjct: 321 PGAGVCGIN 329


>gi|359359213|gb|AEV41117.1| putative oryzain beta chain precursor [Oryza officinalis]
          Length = 465

 Score =  207 bits (527), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 124/322 (38%), Positives = 175/322 (54%), Gaps = 29/322 (9%)

Query: 49  AEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLR--RAKRRQLLDPTAVHGVTKFSDLTP 106
           A   + L+ ++  ++Y    EH+ RFRVF  NLR   A   +  D     G+ +F+DLT 
Sbjct: 50  ARAAYDLWLAENGRSYNALGEHERRFRVFWDNLRFADAHNARADDHGFRLGMNRFADLTN 109

Query: 107 SEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSA 166
            EFR  FLG     R  A  ++       +LP   DWR+ GAV  VK+QG CGSCW+FSA
Sbjct: 110 EEFRATFLGAKVVERSRAAGERYRHDGVEELPESVDWREKGAVAPVKNQGQCGSCWAFSA 169

Query: 167 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGV 226
              +E  + L TGE+++LSEQ+LV+C        +   +SGCNGGLM+ AF++I+K GG+
Sbjct: 170 VSTVESINQLVTGEMITLSEQELVEC-------STNGQNSGCNGGLMDDAFDFIIKNGGI 222

Query: 227 EREKDYPYTGTDGGSCKFDKSKI-AAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--V 283
           + E DYPY   D G C  ++      ++  F  +  ++++     V H P++V I A   
Sbjct: 223 DTEDDYPYKAVD-GKCDINRENAKVVSIDGFEDVPQNDEKSLQKAVAHQPVSVAIEAGGR 281

Query: 284 WMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYY 343
             Q Y  GV     CG  LDHGV+ VGYG+          K YWI++NSWG  WGE+GY 
Sbjct: 282 EFQLYHSGVFSGR-CGTSLDHGVVAVGYGTD-------NGKDYWIVRNSWGPKWGESGYV 333

Query: 344 KICMGRNV------CGVDSMVS 359
           +  M RN+      CG+  M S
Sbjct: 334 R--MERNINVTTGKCGIAMMAS 353


>gi|222629675|gb|EEE61807.1| hypothetical protein OsJ_16426 [Oryza sativa Japonica Group]
          Length = 459

 Score =  207 bits (527), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 121/324 (37%), Positives = 176/324 (54%), Gaps = 28/324 (8%)

Query: 35  VPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTA 94
           + S GE+SE+    A   ++ +K++  K+Y    E + R+  F+ NLR            
Sbjct: 26  IVSYGERSEEE---ARRLYAEWKAEHGKSYNAVGEEERRYAAFRDNLRYIDEHNAAADAG 82

Query: 95  VH----GVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTND-LPTDFDWRDHGAV 149
           VH    G+ +F+DLT  E+R  +LGL  + R         +   N+ LP   DWR  GAV
Sbjct: 83  VHSFRLGLNRFADLTNEEYRDTYLGLRNKPRRERKVSDRYLAADNEALPESVDWRTKGAV 142

Query: 150 TGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCN 209
             +KDQG CGSCW+FSA  A+EG + + TG+L+SLSEQ+LVDCD         S + GCN
Sbjct: 143 AEIKDQGGCGSCWAFSAIAAVEGINQIVTGDLISLSEQELVDCDT--------SYNEGCN 194

Query: 210 GGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAAN 269
           GGLM+ AF++I+  GG++ E DYPY G D       K+     + ++  ++ + +     
Sbjct: 195 GGLMDYAFDFIINNGGIDTEDDYPYKGKDERCDVNRKNAKVVTIDSYEDVTPNSETSLQK 254

Query: 270 LVKHGPLAVGINA--VWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYW 327
            V + P++V I A     Q Y  G+     CG  LDHGV  VGYG+          K YW
Sbjct: 255 AVANQPVSVAIEAGGRAFQLYSSGIFTG-KCGTALDHGVAAVGYGTE-------NGKDYW 306

Query: 328 IIKNSWGENWGENGYYKICMGRNV 351
           I++NSWG++WGE+GY +  M RN+
Sbjct: 307 IVRNSWGKSWGESGYVR--MERNI 328


>gi|21483188|gb|AAK77918.1| cathepsin L 1 [Dictyocaulus viviparus]
          Length = 347

 Score =  207 bits (527), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 133/318 (41%), Positives = 172/318 (54%), Gaps = 31/318 (9%)

Query: 56  FKSKFSKTYATQEEHDYRFRVFKANL----RRAKRRQLLDPTAVHGVTKFSDLTPSEFRR 111
           +K K+ K Y  +EE+DY    F  N+          +L   T   G+   +DL  SE+R+
Sbjct: 43  YKIKYDKHYDPEEENDY-MEAFVKNMIHIEEHNHEHRLGRKTFEMGLNNIADLPFSEYRK 101

Query: 112 QFLGLNRRLRLPADAQKAP----ILPTN-DLPTDFDWRDHGAVTGVKDQGACGSCWSFSA 166
             L   R  RL  D+ +      ++P N  +P   DWR+H  VT VK+QG CGSCW+FSA
Sbjct: 102 --LNGYRHRRLFGDSMRKNGTKFLVPFNVKVPDSVDWREHNLVTPVKNQGMCGSCWAFSA 159

Query: 167 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGV 226
           TGALEG HF +TG+LVSLSEQ LVDC        +   + GCNGGLM+ AFEYI    G+
Sbjct: 160 TGALEGQHFRATGKLVSLSEQNLVDC-------STKYGNHGCNGGLMDLAFEYIKDNHGI 212

Query: 227 EREKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVGINA--V 283
           + E+ YPY G +   C F K  I A    F  +   DED +   +   GP+++ I+A   
Sbjct: 213 DTEEGYPYVGKE-MRCHFKKRDIGAEDRGFVDLPEGDEDALKVAVATQGPISIAIDAGHR 271

Query: 284 WMQTYIGGVSCPYIC-GKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGY 342
             Q Y  GV     C  + LDHGVL+VGYG+   A        YWIIKNSWG  WGE GY
Sbjct: 272 SFQLYKKGVYFDEECSSEELDHGVLLVGYGTDPEAG------DYWIIKNSWGTKWGEKGY 325

Query: 343 YKICMGRNV-CGVDSMVS 359
            +I   RN  CGV +  S
Sbjct: 326 VRIARNRNNHCGVATKAS 343


>gi|945081|gb|AAC49361.1| P21 [Petunia x hybrida]
          Length = 358

 Score =  207 bits (527), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 135/347 (38%), Positives = 185/347 (53%), Gaps = 34/347 (9%)

Query: 27  DDAMIRQVVPSDGEQSED---HLLNAEHH---FSLFKSKFSKTYATQEEHDYRFRVFKAN 80
           D+  IRQVV     + E    H++    H   F+ F  ++ K Y + EE   RF +F  N
Sbjct: 27  DENPIRQVVSDSFHELESGILHVVGQTRHALSFARFARRYGKRYDSVEEIKQRFDIFLDN 86

Query: 81  LRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTD 140
           L           +   GV +FSDLT  EFRR  LG  +     A  +    L    LP  
Sbjct: 87  LEMINSHNDKGLSYKLGVNEFSDLTWDEFRRDRLGAAQNC--SATTKGNLKLRDAVLPET 144

Query: 141 FDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEE 200
            DWR+ G V+ VK+QG CGSCW+FS TGALE A+    G+ +SLSEQQLVDC        
Sbjct: 145 KDWREAGIVSPVKNQGKCGSCWTFSTTGALEAAYTQKFGKGISLSEQQLVDC-------- 196

Query: 201 SGSCDS-GCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVS---NF 256
           +G+ ++ GCNGGL + AFEYI   GG+E E+ YPYTG + G CKF    +   V+   N 
Sbjct: 197 AGAFNNFGCNGGLPSQAFEYIKSNGGLETEEAYPYTGKN-GLCKFSSQNVGVKVTDSVNI 255

Query: 257 SVISSDEDQMAANLVKHGPLAVGINAV-WMQTYIGGVSCPYICGKY---LDHGVLIVGYG 312
           ++ + DE + A  LV+  P++V    V   + Y  GV     CG     ++H VL VGYG
Sbjct: 256 TLGAEDELKYAVALVR--PVSVAFEVVKGFKQYKSGVYTSTECGTTPMDVNHAVLAVGYG 313

Query: 313 SSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVS 359
                       P+W+IKNSWG +WG+N Y+K+ MG ++CG+ +  S
Sbjct: 314 VE-------YGVPFWLIKNSWGADWGDNAYFKMEMGNDMCGIATCAS 353


>gi|50355615|dbj|BAD29956.1| cysteine protease [Daucus carota]
          Length = 423

 Score =  207 bits (527), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 120/310 (38%), Positives = 174/310 (56%), Gaps = 26/310 (8%)

Query: 59  KFSKTYATQEEHDYRFRVFKANLRRA-KRRQLLDPTAVHGVTKFSDLTPSEFRRQFLG-- 115
           K  K Y      + RF +FK NLR   +  + ++ +   G+ KF+DL+  E++  FLG  
Sbjct: 13  KHHKNYNALGAKEKRFEIFKDNLRFIDEHNKGVNQSFKLGLNKFADLSNEEYKSMFLGGR 72

Query: 116 -LNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAH 174
            +  R    +D  K  +   ++LP   DWR+ GAV  VKDQG CGSCW+FS   A+EG +
Sbjct: 73  MVRDRKGFESDRFKYGV--GDELPQSVDWREKGAVAPVKDQGQCGSCWAFSTVAAVEGIN 130

Query: 175 FLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPY 234
            ++TG+L+SLSEQ+LVDCD           + GCNGG M+ AFE+I+K GG++ E DYPY
Sbjct: 131 QIATGDLISLSEQELVDCDK--------GFNQGCNGGFMDYAFEFIVKNGGIDTEDDYPY 182

Query: 235 TGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGV 292
            G DG   +  K+     ++ F  +  ++++     V H P++V I A     Q Y  G+
Sbjct: 183 KGVDGQCDQNRKNAKVVTINGFEDVPQNDEKSLKKAVAHQPVSVAIEAGGRAFQLYESGI 242

Query: 293 SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVC 352
               +CG  LDHGV+ VGYG+          K YWI++NSWG NWGENGY +  + RNV 
Sbjct: 243 F-NGLCGTDLDHGVVAVGYGTE-------DGKDYWIVRNSWGPNWGENGYIR--LERNVA 292

Query: 353 GVDSMVSSVA 362
             ++    +A
Sbjct: 293 STNTGKCGIA 302


>gi|47086859|ref|NP_997749.1| cathepsin L, 1 a precursor [Danio rerio]
 gi|42542930|gb|AAH66490.1| Cathepsin L1, a [Danio rerio]
          Length = 337

 Score =  207 bits (527), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 130/321 (40%), Positives = 171/321 (53%), Gaps = 28/321 (8%)

Query: 52  HFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH----GVTKFSDLTPS 107
           H+  +K   SK Y   EE  +R  +++ NL++ +   L     +H    G+  F D+T  
Sbjct: 28  HWDQWKKWHSKKYHATEE-GWRRVIWEKNLKKIEMHNLEHSMGIHTYRLGMNHFGDMTHE 86

Query: 108 EFRRQFLGL----NRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWS 163
           EFR+   G     +RR R     +   I    ++P   DWR+ G VT VKDQG CGSCW+
Sbjct: 87  EFRQVMNGFKHKKDRRFRGSLFMEPNFI----EVPNKLDWREKGYVTPVKDQGECGSCWA 142

Query: 164 FSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA 223
           FS TGALEG  F  TG+LVSLSEQ LVDC     PE     + GCNGGLM+ AF+Y+   
Sbjct: 143 FSTTGALEGQMFRKTGKLVSLSEQNLVDCSR---PE----GNEGCNGGLMDQAFQYVKDQ 195

Query: 224 GGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVGINA 282
            G++ E+ YPY GTD   C FD    AA  + F  + S  E  +   +   GP++V I+A
Sbjct: 196 NGLDSEESYPYLGTDDQPCHFDPKNSAANDTGFVDIPSGKERALMKAIAAVGPVSVAIDA 255

Query: 283 --VWMQTYIGGVSCPYIC-GKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGE 339
                Q Y  G+     C  + LDHGVL VGY   GF       K YWI+KNSW ENWG+
Sbjct: 256 GHESFQFYQSGIYYEKECSSEELDHGVLAVGY---GFEGEDVDGKKYWIVKNSWSENWGD 312

Query: 340 NGYYKICMGR-NVCGVDSMVS 359
            GY  +   R N CG+ +  S
Sbjct: 313 KGYIYMAKDRHNHCGIATAAS 333


>gi|530736|emb|CAA56915.1| cathepsin l [Nephrops norvegicus]
 gi|1582621|prf||2119193B cathepsin L-related Cys protease
          Length = 313

 Score =  207 bits (527), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 129/323 (39%), Positives = 169/323 (52%), Gaps = 27/323 (8%)

Query: 46  LLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRA----KRRQLLDPTAVHGVTKF 101
           L  A   +  FK+++ + Y   +E  YR RVF+ N +      K+ +  + T    + +F
Sbjct: 5   LATASPSWEHFKTQYGRKYGDAKEELYRQRVFQQNEQLVEAFNKKFENGEVTFKVAMNQF 64

Query: 102 SDLTPSEFRRQFLGLNRRLR-LPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGS 160
            D+T  EF     G  +  R  P     A   P   +  D DWR  GAVT VKDQG CGS
Sbjct: 65  GDMTNEEFNAVMKGYKKGSRGEPTTVFTAEGRP---MAADVDWRTKGAVTPVKDQGQCGS 121

Query: 161 CWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYI 220
           CW+FSATG+LEG HFL   ELVSLSEQ+LVDC  E         + GC GG M SAF+YI
Sbjct: 122 CWAFSATGSLEGQHFLKNNELVSLSEQELVDCSTEYG-------NDGCGGGWMTSAFDYI 174

Query: 221 LKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGI 280
              GG++ E  YPY   D  SC+FD + I A  + F  +   E+ +   +   GP++V I
Sbjct: 175 KDNGGIDTESSYPYEAQD-RSCRFDANSIGATCTGFVEVQHTEEALHEAVSDIGPISVAI 233

Query: 281 NA--VWMQTYIGGVSCPYICG-KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENW 337
           +A     Q Y  GV     C    LDHGVL VGYG+          + YW++KNSWG  W
Sbjct: 234 DASHFSFQFYSSGVYYEKKCSPTNLDHGVLAVGYGTE-------STEDYWLVKNSWGSGW 286

Query: 338 GENGYYKICMGR-NVCGVDSMVS 359
           G+ GY K+   R N CG+ S  S
Sbjct: 287 GDAGYIKMSRNRDNNCGIASEPS 309


>gi|224103643|ref|XP_002313136.1| predicted protein [Populus trichocarpa]
 gi|222849544|gb|EEE87091.1| predicted protein [Populus trichocarpa]
          Length = 477

 Score =  207 bits (527), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 130/359 (36%), Positives = 190/359 (52%), Gaps = 32/359 (8%)

Query: 11  LLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEH 70
              LS  LA  +++ D +    QV     E++E   L     + ++  K+ K Y    E 
Sbjct: 14  FYFLSVCLAIDMSIIDYNLKHGQVP----ERTEAETLRL---YEMWLVKYGKAYNALGEK 66

Query: 71  DYRFRVFKANLRRAKRRQLL-DPTAVHGVTKFSDLTPSEFRRQFLG--LNRRLRLPADAQ 127
           + RF +FK NL+   +   + +P+   G+ KF+DL+  E+R  +LG  ++ + RL    +
Sbjct: 67  ERRFEIFKDNLKFVDQHNSVGNPSYKLGLNKFADLSNEEYRAAYLGTRMDGKRRLLGGPK 126

Query: 128 KAPIL--PTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLS 185
            A  L    +DLP   DWR+ GAV  VKDQG CGSCW+FS  GA+EG + + TG L SLS
Sbjct: 127 SARYLFKDGDDLPESVDWREKGAVAPVKDQGQCGSCWAFSTVGAVEGINQIVTGNLTSLS 186

Query: 186 EQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFD 245
           EQ+LVDCD           + GCNGGLM+ AFE+I+K GG++ E+DYPY   D       
Sbjct: 187 EQELVDCDK--------VYNQGCNGGLMDYAFEFIMKNGGIDTEEDYPYKAVDSMCDPNR 238

Query: 246 KSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSCPYICGKYLD 303
           K+     +  +  +  ++++     V + P++V I A     Q Y  GV     CG  LD
Sbjct: 239 KNARVVTIDGYEDVPQNDEKSLRKAVANQPVSVAIEAGGRAFQLYQSGVFTG-SCGTQLD 297

Query: 304 HGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVA 362
           HGV+ VGYG+            YW+++NSWG  WGENGY +  M RNV   ++    +A
Sbjct: 298 HGVVAVGYGTENGV-------DYWVVRNSWGPAWGENGYIR--MERNVASTETGKCGIA 347


>gi|12847813|dbj|BAB27719.1| unnamed protein product [Mus musculus]
          Length = 334

 Score =  207 bits (527), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 126/324 (38%), Positives = 173/324 (53%), Gaps = 24/324 (7%)

Query: 44  DHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHG----VT 99
           D   +AE H   +KS   + Y T EE ++R  +++ N+R  +          HG    + 
Sbjct: 22  DQTFSAEWH--QWKSTHRRLYGTNEE-EWRRAIWEKNMRMIQLHNGEYSNGQHGFSMEMN 78

Query: 100 KFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACG 159
            F D+T  EFR+   G   +        + P++    +P   DWR+ G VT VK+QG CG
Sbjct: 79  AFGDMTNEEFRQVVNGYRHQKHKKGRLFQEPLMLK--IPKSVDWREKGCVTPVKNQGQCG 136

Query: 160 SCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEY 219
           SCW+FSA+G LEG  FL TG+L+SLSEQ LVDC H          + GCNGGLM+ AF+Y
Sbjct: 137 SCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSH-------AQGNQGCNGGLMDYAFQY 189

Query: 220 ILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVG 279
           I + GG++ E+ YPY   D GSCK+      A  + F  I   E  +   +   GP++V 
Sbjct: 190 IKENGGLDSEESYPYEAKD-GSCKYRAEFAVANDTGFVDIPQQEKALMKAVATVGPISVA 248

Query: 280 INAVW--MQTYIGGVSC-PYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGEN 336
           ++A    +Q Y  G+   P    K LDHGVL+VGYG  G    + K   YW++KNSWG  
Sbjct: 249 MDASHPSLQFYSSGIYYEPNCSSKNLDHGVLLVGYGYEGTDSNKNK---YWLVKNSWGSE 305

Query: 337 WGENGYYKICMGR-NVCGVDSMVS 359
           WG  GY KI   R N CG+ +  S
Sbjct: 306 WGMEGYIKIAKDRDNHCGLATAAS 329


>gi|74149661|dbj|BAE36450.1| unnamed protein product [Mus musculus]
          Length = 334

 Score =  207 bits (526), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 126/324 (38%), Positives = 173/324 (53%), Gaps = 24/324 (7%)

Query: 44  DHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHG----VT 99
           D   +AE H   +KS   + Y T EE ++R  +++ N+R  +          HG    + 
Sbjct: 22  DQTFSAEWH--QWKSTHRRLYGTNEE-EWRRAIWEKNMRMIQLHNGEYSNGQHGFSMEMN 78

Query: 100 KFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACG 159
            F D+T  EFR+   G   +        + P++    +P   DWR+ G VT VK+QG CG
Sbjct: 79  AFGDMTNEEFRQVVNGYRHQKHKKGRLFQEPLMLK--IPKSVDWREKGCVTPVKNQGQCG 136

Query: 160 SCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEY 219
           SCW+FSA+G LEG  FL TG+L+SLSEQ LVDC H          + GCNGGLM+ AF+Y
Sbjct: 137 SCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSH-------AQGNQGCNGGLMDFAFQY 189

Query: 220 ILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVG 279
           I + GG++ E+ YPY   D GSCK+      A  + F  I   E  +   +   GP++V 
Sbjct: 190 IKENGGLDSEESYPYEAKD-GSCKYRAEFAVANGTGFVDIPQQEKALMKAVATVGPISVA 248

Query: 280 INAVW--MQTYIGGVSC-PYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGEN 336
           ++A    +Q Y  G+   P    K LDHGVL+VGYG  G    + K   YW++KNSWG  
Sbjct: 249 MDASHPSLQFYSSGIYYEPNCSSKNLDHGVLLVGYGYEGTDSNKNK---YWLVKNSWGSE 305

Query: 337 WGENGYYKICMGR-NVCGVDSMVS 359
           WG  GY KI   R N CG+ +  S
Sbjct: 306 WGMEGYIKIAKDRDNHCGLATAAS 329


>gi|340368362|ref|XP_003382721.1| PREDICTED: cathepsin L1-like [Amphimedon queenslandica]
          Length = 329

 Score =  207 bits (526), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 123/313 (39%), Positives = 174/313 (55%), Gaps = 27/313 (8%)

Query: 51  HHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVT----KFSDLTP 106
           + + L+K+ + K+Y T EE  YR   ++ N    K       +  HG T     F DLT 
Sbjct: 25  NEWELWKATYGKSYLTLEEEKYRRDTWEENSLLIKTHNT--DSDKHGYTLEMNSFGDLTS 82

Query: 107 SEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSA 166
           +EF   + G  + L        + +   N +P+  DWRD   VT VK+QG CGSCW+FS 
Sbjct: 83  AEFSSLYNGYRQNLETSGSVFSSSL--RNAMPSSLDWRDKKVVTDVKNQGKCGSCWAFST 140

Query: 167 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGV 226
           TG+LEG H L TG LVSLSEQQL+DC  +         ++GC+GG M SAF+YI  AGG 
Sbjct: 141 TGSLEGLHALKTGHLVSLSEQQLMDCSVKYG-------NNGCDGGNMRSAFQYIKDAGGD 193

Query: 227 EREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVI-SSDEDQMAANLVKHGPLAVGINA--V 283
           + E+ YPYT  +  SC+FD  K+ A    +  I S DE  +   L + GP++V ++A   
Sbjct: 194 DTEESYPYTAKN-ESCRFDPKKVGATDEGYVRIPSGDEVSLMHALYEVGPISVAMDAGLK 252

Query: 284 WMQTYIGGVSCPYICGK-YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGY 342
             Q Y  G+   Y+C   +L+HGV ++GYG S          PYW++KNSWG++WG +GY
Sbjct: 253 TFQFYKKGIYSDYLCSNTHLNHGVTLIGYGESSDGS------PYWLVKNSWGKDWGIDGY 306

Query: 343 YKIC-MGRNVCGV 354
           + +     N+CGV
Sbjct: 307 FMLARYVGNMCGV 319


>gi|6753558|ref|NP_034114.1| cathepsin L1 preproprotein [Mus musculus]
 gi|115742|sp|P06797.2|CATL1_MOUSE RecName: Full=Cathepsin L1; AltName: Full=Major excreted protein;
           Short=MEP; AltName: Full=p39 cysteine proteinase;
           Contains: RecName: Full=Cathepsin L1 heavy chain;
           Contains: RecName: Full=Cathepsin L1 light chain; Flags:
           Precursor
 gi|53047|emb|CAA29470.1| unnamed protein product [Mus musculus]
 gi|309186|gb|AAA37445.1| preprocysteine proteinase [Mus musculus]
 gi|12832050|dbj|BAB21945.1| unnamed protein product [Mus musculus]
 gi|26340196|dbj|BAC33761.1| unnamed protein product [Mus musculus]
 gi|45768760|gb|AAH68163.1| Cathepsin L [Mus musculus]
 gi|74139700|dbj|BAE31701.1| unnamed protein product [Mus musculus]
 gi|74146632|dbj|BAE41323.1| unnamed protein product [Mus musculus]
 gi|74151584|dbj|BAE41141.1| unnamed protein product [Mus musculus]
 gi|74185397|dbj|BAE30172.1| unnamed protein product [Mus musculus]
 gi|74197196|dbj|BAE35143.1| unnamed protein product [Mus musculus]
 gi|74203006|dbj|BAE26206.1| unnamed protein product [Mus musculus]
 gi|74219606|dbj|BAE29572.1| unnamed protein product [Mus musculus]
 gi|148684295|gb|EDL16242.1| cathepsin L [Mus musculus]
          Length = 334

 Score =  207 bits (526), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 126/324 (38%), Positives = 173/324 (53%), Gaps = 24/324 (7%)

Query: 44  DHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHG----VT 99
           D   +AE H   +KS   + Y T EE ++R  +++ N+R  +          HG    + 
Sbjct: 22  DQTFSAEWH--QWKSTHRRLYGTNEE-EWRRAIWEKNMRMIQLHNGEYSNGQHGFSMEMN 78

Query: 100 KFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACG 159
            F D+T  EFR+   G   +        + P++    +P   DWR+ G VT VK+QG CG
Sbjct: 79  AFGDMTNEEFRQVVNGYRHQKHKKGRLFQEPLMLK--IPKSVDWREKGCVTPVKNQGQCG 136

Query: 160 SCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEY 219
           SCW+FSA+G LEG  FL TG+L+SLSEQ LVDC H          + GCNGGLM+ AF+Y
Sbjct: 137 SCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSH-------AQGNQGCNGGLMDFAFQY 189

Query: 220 ILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVG 279
           I + GG++ E+ YPY   D GSCK+      A  + F  I   E  +   +   GP++V 
Sbjct: 190 IKENGGLDSEESYPYEAKD-GSCKYRAEFAVANDTGFVDIPQQEKALMKAVATVGPISVA 248

Query: 280 INAVW--MQTYIGGVSC-PYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGEN 336
           ++A    +Q Y  G+   P    K LDHGVL+VGYG  G    + K   YW++KNSWG  
Sbjct: 249 MDASHPSLQFYSSGIYYEPNCSSKNLDHGVLLVGYGYEGTDSNKNK---YWLVKNSWGSE 305

Query: 337 WGENGYYKICMGR-NVCGVDSMVS 359
           WG  GY KI   R N CG+ +  S
Sbjct: 306 WGMEGYIKIAKDRDNHCGLATAAS 329


>gi|390994425|gb|AFM37362.1| cathepsin L2 [Dictyocaulus viviparus]
          Length = 352

 Score =  207 bits (526), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 133/318 (41%), Positives = 172/318 (54%), Gaps = 31/318 (9%)

Query: 56  FKSKFSKTYATQEEHDYRFRVFKANL----RRAKRRQLLDPTAVHGVTKFSDLTPSEFRR 111
           +K K+ K Y  +EE+DY    F  N+          +L   T   G+   +DL  SE+R+
Sbjct: 48  YKIKYDKHYDPEEENDY-MEAFVKNMIHIEEHNHEHRLGRKTFEMGLNNIADLPFSEYRK 106

Query: 112 QFLGLNRRLRLPADAQKAP----ILPTN-DLPTDFDWRDHGAVTGVKDQGACGSCWSFSA 166
             L   R  RL  D+ +      ++P N  +P   DWR+H  VT VK+QG CGSCW+FSA
Sbjct: 107 --LNGYRHRRLFGDSMRKNGTKFLVPFNVKVPDSVDWREHNLVTPVKNQGMCGSCWAFSA 164

Query: 167 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGV 226
           TGALEG HF +TG+LVSLSEQ LVDC        +   + GCNGGLM+ AFEYI    G+
Sbjct: 165 TGALEGQHFRATGKLVSLSEQNLVDCS-------TKYGNHGCNGGLMDLAFEYIKDNHGI 217

Query: 227 EREKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVGINA--V 283
           + E+ YPY G +   C F K  I A    F  +   DED +   +   GP+++ I+A   
Sbjct: 218 DTEEGYPYVGKE-MRCHFKKRDIGAEDRGFVDLPEGDEDALKVAVATQGPISIAIDAGHR 276

Query: 284 WMQTYIGGVSCPYIC-GKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGY 342
             Q Y  GV     C  + LDHGVL+VGYG+   A        YWIIKNSWG  WGE GY
Sbjct: 277 SFQLYKKGVYFDEECSSEELDHGVLLVGYGTDPEAG------DYWIIKNSWGTKWGEKGY 330

Query: 343 YKICMGRNV-CGVDSMVS 359
            +I   RN  CGV +  S
Sbjct: 331 VRIARNRNNHCGVATKAS 348


>gi|242086591|ref|XP_002439128.1| hypothetical protein SORBIDRAFT_09g000960 [Sorghum bicolor]
 gi|241944413|gb|EES17558.1| hypothetical protein SORBIDRAFT_09g000960 [Sorghum bicolor]
          Length = 371

 Score =  207 bits (526), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 129/326 (39%), Positives = 179/326 (54%), Gaps = 35/326 (10%)

Query: 51  HHFSLFK------SKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDL 104
           HH  L K      +K+ K YA+ EE  +RF VFK NL           T   G+  F+DL
Sbjct: 58  HHDRLIKLFEEWVAKYRKAYASFEEKLHRFEVFKDNLHHIDEANKKVTTYWLGLNAFADL 117

Query: 105 TPSEFRRQFLGLNR-RLRLPADAQ-KAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCW 162
           T  EF+  +LGL +   +   D++ +   +  +D+P   DWR  GAVT VK+QG CGSCW
Sbjct: 118 THDEFKATYLGLRQPETKKTTDSRFRYGGVADDDVPASVDWRKKGAVTDVKNQGQCGSCW 177

Query: 163 SFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK 222
           +FS   A+EG + + TG L SLSEQ+LVDC        S   ++GCNGG+M++AF YI  
Sbjct: 178 AFSTVAAVEGINQIVTGNLTSLSEQELVDC--------STDGNNGCNGGVMDNAFSYIAS 229

Query: 223 AGGVEREKDYPYTGTDGGSC--KFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGI 280
           +GG+  E+ YPY   + G C  K    +    +S +  + ++++Q     + H PL+V I
Sbjct: 230 SGGLRTEEAYPYL-MEEGDCDDKARDGEQVVTISGYEDVPANDEQALVKALAHQPLSVAI 288

Query: 281 NAV--WMQTYIGGV-SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENW 337
            A     Q Y GGV + P  CG  LDHGV  VGYGSS       K + Y I+KNSWG +W
Sbjct: 289 EASGRHFQFYSGGVFNGP--CGSELDHGVAAVGYGSS-------KGQDYIIVKNSWGSHW 339

Query: 338 GENGYYKICMG----RNVCGVDSMVS 359
           GE GY ++  G      +CG++ M S
Sbjct: 340 GEKGYIRMKRGTGKPEGLCGINKMAS 365


>gi|302759380|ref|XP_002963113.1| hypothetical protein SELMODRAFT_270344 [Selaginella moellendorffii]
 gi|300169974|gb|EFJ36576.1| hypothetical protein SELMODRAFT_270344 [Selaginella moellendorffii]
          Length = 479

 Score =  207 bits (526), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 132/305 (43%), Positives = 169/305 (55%), Gaps = 35/305 (11%)

Query: 69  EHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLG--LNR-RLRLPAD 125
           E   R+ +FK NLR        +     G+  F+DLT  EFR Q  G   +R R R   +
Sbjct: 81  EKATRYGIFKDNLRFIHGENEKNQGYFLGLNAFADLTNEEFRAQRHGGRFDRSRERTSYE 140

Query: 126 AQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLS 185
             +   +   DLP   DWR+ GAV GVKDQG+CGSCW+FSA  A+EG + L+TGELVSLS
Sbjct: 141 EFRYGSVQLKDLPDSIDWREKGAVVGVKDQGSCGSCWAFSAVAAIEGVNKLATGELVSLS 200

Query: 186 EQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFD 245
           EQ+LVDCD           D GCNGGLM+ AF +++K GG++ E DYPY G  G  C  D
Sbjct: 201 EQELVDCDK--------GEDEGCNGGLMDYAFGFVIKNGGLDTEADYPYKGY-GTRC--D 249

Query: 246 KSKIAAAV---SNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSCPYICGK 300
           +SK+ A V     +  +  +++      V H P++V I+A    MQ Y  G+     CG 
Sbjct: 250 RSKMNAKVVTIDGYEDVPVNDETALLKAVAHQPVSVAIDAGGSSMQFYRSGIFTGR-CGT 308

Query: 301 YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRN------VCGV 354
            LDHGV  VGYG       +   K YWIIKNSWG NWGE GY K  M RN      +CG+
Sbjct: 309 DLDHGVTNVGYG-------KEDGKAYWIIKNSWGSNWGEKGYIK--MARNTGLAAGLCGI 359

Query: 355 DSMVS 359
           +   S
Sbjct: 360 NMEAS 364


>gi|218195711|gb|EEC78138.1| hypothetical protein OsI_17694 [Oryza sativa Indica Group]
          Length = 458

 Score =  207 bits (526), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 121/324 (37%), Positives = 175/324 (54%), Gaps = 28/324 (8%)

Query: 35  VPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTA 94
           + S GE+SE+    A   ++ +K++  K Y    E + R+  F+ NLR            
Sbjct: 25  IVSYGERSEEE---ARRLYAEWKAEHGKNYNAVGEEERRYAAFRDNLRYIDEHNAAADAG 81

Query: 95  VH----GVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTND-LPTDFDWRDHGAV 149
           VH    G+ +F+DLT  E+R  +LGL  + R         +   N+ LP   DWR  GAV
Sbjct: 82  VHSFRLGLNRFADLTNEEYRDTYLGLRNKPRRERKVSDRYLAADNEALPESVDWRTKGAV 141

Query: 150 TGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCN 209
             +KDQG CGSCW+FSA  A+EG + + TG+L+SLSEQ+LVDCD         S + GCN
Sbjct: 142 AEIKDQGGCGSCWAFSAIAAVEGINQIVTGDLISLSEQELVDCDT--------SYNEGCN 193

Query: 210 GGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAAN 269
           GGLM+ AF++I+  GG++ E DYPY G D       K+     + ++  ++ + +     
Sbjct: 194 GGLMDYAFDFIINNGGIDTEDDYPYKGKDERCDVNRKNAKVVTIDSYEDVTPNSETSLQK 253

Query: 270 LVKHGPLAVGINA--VWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYW 327
            V + P++V I A     Q Y  G+     CG  LDHGV  VGYG+          K YW
Sbjct: 254 AVANQPVSVAIEAGGRAFQLYSSGIFTG-KCGTALDHGVAAVGYGTE-------NGKDYW 305

Query: 328 IIKNSWGENWGENGYYKICMGRNV 351
           I++NSWG++WGE+GY +  M RN+
Sbjct: 306 IVRNSWGKSWGESGYVR--MERNI 327


>gi|302796898|ref|XP_002980210.1| hypothetical protein SELMODRAFT_153766 [Selaginella moellendorffii]
 gi|300151826|gb|EFJ18470.1| hypothetical protein SELMODRAFT_153766 [Selaginella moellendorffii]
          Length = 479

 Score =  207 bits (526), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 132/305 (43%), Positives = 169/305 (55%), Gaps = 35/305 (11%)

Query: 69  EHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLG--LNR-RLRLPAD 125
           E   R+ +FK NLR        +     G+  F+DLT  EFR Q  G   +R R R   +
Sbjct: 81  EKATRYGIFKDNLRFIHGENEKNQGYFLGLNAFADLTNEEFRAQRHGGRFDRSRERTSHE 140

Query: 126 AQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLS 185
             +   +   DLP   DWR+ GAV GVKDQG+CGSCW+FSA  A+EG + L+TGELVSLS
Sbjct: 141 EFRYGSVQLKDLPDSIDWREKGAVVGVKDQGSCGSCWAFSAVAAIEGVNKLATGELVSLS 200

Query: 186 EQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFD 245
           EQ+LVDCD           D GCNGGLM+ AF +++K GG++ E DYPY G  G  C  D
Sbjct: 201 EQELVDCDK--------GEDEGCNGGLMDYAFGFVIKNGGLDTEADYPYKGY-GTRC--D 249

Query: 246 KSKIAAAV---SNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSCPYICGK 300
           +SK+ A V     +  +  +++      V H P++V I+A    MQ Y  G+     CG 
Sbjct: 250 RSKMNAKVVTIDGYEDVPVNDETALLKAVAHQPVSVAIDAGGSSMQFYRSGIFTGR-CGT 308

Query: 301 YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRN------VCGV 354
            LDHGV  VGYG       +   K YWIIKNSWG NWGE GY K  M RN      +CG+
Sbjct: 309 DLDHGVTNVGYG-------KEDGKAYWIIKNSWGSNWGEKGYVK--MARNTGLAAGLCGI 359

Query: 355 DSMVS 359
           +   S
Sbjct: 360 NMEAS 364


>gi|157644745|gb|ABV59078.1| cathepsin L [Lates calcarifer]
          Length = 337

 Score =  207 bits (526), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 131/319 (41%), Positives = 173/319 (54%), Gaps = 23/319 (7%)

Query: 52  HFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH----GVTKFSDLTPS 107
           H+ L+KS  SK Y  +EE  +R  V++ NL++ +   L      H    G+  F D+T  
Sbjct: 27  HWDLWKSWHSKKYHEKEE-GWRRMVWEKNLKKIELHNLEHSMGKHPYRLGMNHFGDMTHE 85

Query: 108 EFRRQFLGLNRRLRLPADAQKAPILPTNDL--PTDFDWRDHGAVTGVKDQGACGSCWSFS 165
           EFR+   G  +R +     + +  +  N L  P   DWRD G VT VKDQG CGSCW+FS
Sbjct: 86  EFRQIMNGYKQR-KTERKFKGSLFMEPNFLEAPRALDWRDKGYVTPVKDQGQCGSCWAFS 144

Query: 166 ATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGG 225
            TGALEG  F  TG+LVSLSEQ LVDC     PE     + GCNGGLM+ AF+Y+    G
Sbjct: 145 TTGALEGQQFRKTGKLVSLSEQNLVDCSR---PE----GNEGCNGGLMDQAFQYVKDNQG 197

Query: 226 VEREKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVGINA-- 282
           ++ E  YPY GTD   C +D +  +A  + F  V S  E  +   +   GP++V I+A  
Sbjct: 198 LDSEDSYPYLGTDDQPCHYDPNYNSANDTGFVDVPSGKERALMKAVAAVGPVSVAIDAGH 257

Query: 283 VWMQTYIGGVSCPYIC-GKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENG 341
              Q Y  G+     C  + LDHGVL+VGYG  G        K YWI+KNSW E WG+ G
Sbjct: 258 ESFQFYQSGIYYEKDCSSEELDHGVLVVGYGYEG---EDVDGKKYWIVKNSWSEKWGDKG 314

Query: 342 YYKICMGR-NVCGVDSMVS 359
           Y  +   R N CG+ +  S
Sbjct: 315 YIYMAKDRKNHCGIATAAS 333


>gi|47524507|gb|AAT34987.1| putative cysteine protease [Gossypium hirsutum]
          Length = 344

 Score =  207 bits (526), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 126/310 (40%), Positives = 173/310 (55%), Gaps = 29/310 (9%)

Query: 58  SKFSKTYA-TQEEH-DYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLG 115
           S+  + YA  QE+H + RF VFK N+ R +       T    + +F+DLT  EFR  + G
Sbjct: 42  SQHGRVYADEQEDHKNKRFNVFKENVERIEEFND-GKTFKLAINQFADLTNEEFRASYNG 100

Query: 116 LNRRLRLPADAQK-APILPTN---DLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALE 171
               + L +   K  P    N    LP   DWR  GAVT VK+QG CG CW+FSA  A+E
Sbjct: 101 FKGPMVLSSQITKPTPFRYENVSSALPVSVDWRKKGAVTPVKNQGQCGCCWAFSAVAAIE 160

Query: 172 GAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKD 231
           G   +STG+L+SLSEQ+LVDCD       +   D GC GGLM++AFE+I+  GG+  E +
Sbjct: 161 GITQISTGKLISLSEQELVDCD-------TKGIDHGCEGGLMDTAFEFIINNGGLTTESN 213

Query: 232 YPYTGTDGGSCKFDKSK-IAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTY 288
           YPY G D G+C F+K+  IA +++ +  + ++++Q     V H P++V I A     Q Y
Sbjct: 214 YPYKGED-GTCNFNKTNPIAVSITGYEDVPANDEQALMKAVAHQPVSVAIEAGGSDFQFY 272

Query: 289 IGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYK---- 344
             GV     CG  LDH V  VGYG S           YWI+KNSWG  WGE+GY +    
Sbjct: 273 SSGVFTGE-CGTELDHAVTAVGYGESE------DGSKYWIVKNSWGTKWGESGYIEMQKD 325

Query: 345 ICMGRNVCGV 354
           I + + +CG+
Sbjct: 326 IKVKQGLCGI 335


>gi|182375363|gb|ACB87490.1| mucunain [Mucuna pruriens]
          Length = 422

 Score =  207 bits (526), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 115/294 (39%), Positives = 166/294 (56%), Gaps = 23/294 (7%)

Query: 59  KFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGL-- 116
           K  K Y    E D RF +FK NLR        + T   G+ +F+DLT  E+R ++LG   
Sbjct: 10  KHGKAYNALGEKDKRFDIFKDNLRFIDDHNADNRTYKLGLNRFADLTNEEYRARYLGTRI 69

Query: 117 --NRR-LRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGA 173
             NRR ++    + +      ++LP   DWR+  AV  VKDQG CGSCW+FS  GA+EG 
Sbjct: 70  DPNRRFVKTKTQSNRYAPRVGDNLPESVDWRNESAVLPVKDQGNCGSCWAFSTIGAVEGI 129

Query: 174 HFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYP 233
           + + TG+L+SLSEQ+LVDCD         S + GCNGGLM+ A+E+I+  GG++ E+DYP
Sbjct: 130 NKIVTGDLISLSEQELVDCDT--------SYNQGCNGGLMDYAYEFIINNGGIDSEEDYP 181

Query: 234 YTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGIN--AVWMQTYIGG 291
           Y   DG   ++ K+     + ++  + ++++      V + P++V I       Q Y+ G
Sbjct: 182 YRAVDGTCDQYRKNAKVVTIDSYEDVPANDELALKKAVANQPVSVAIEGGGREFQLYVSG 241

Query: 292 VSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKI 345
           V     CG  LDHGV+ VGYGS        K   YWI++NSWG +WGE GY ++
Sbjct: 242 VFTGR-CGTALDHGVVAVGYGS-------VKGHDYWIVRNSWGASWGEEGYVRL 287


>gi|394331818|gb|AFN27128.1| cysteine protease [Leishmania tropica]
          Length = 443

 Score =  207 bits (526), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 125/313 (39%), Positives = 165/313 (52%), Gaps = 34/313 (10%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           F  FK  + + Y T  E   R   F+ NL   +  Q  +P A  G+TKF DL+ +EF  +
Sbjct: 38  FEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 113 FLGLNRRLRLPADAQKA------PILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSA 166
           +L  N      A  Q A           + +P   DWR  GAVT VKDQGACGSCW+FSA
Sbjct: 98  YL--NGAAYFAAAKQHAGQHYRKARADLSAVPDAVDWRKKGAVTPVKDQGACGSCWAFSA 155

Query: 167 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK--AG 224
            G++E    L+   L +LSE  LV C  +         +SGC GGLM  AFE++L+   G
Sbjct: 156 VGSIESQWALAGHRLTALSEHHLVSCHDK---------NSGCTGGLMLQAFEWLLRNMNG 206

Query: 225 GVEREKDYPYTGTDG--GSCKFDKSKIAAA-VSNFSVISSDEDQMAANLVKHGPLAVGIN 281
            +  E  YPY  + G    C      +  A +  +  I S E  MAA L K+GP+++ ++
Sbjct: 207 TMFTEDSYPYVSSSGYVPECSNSSQLVPGARIDGYMTIESSETVMAAWLAKNGPISIAVD 266

Query: 282 AVWMQTYIGGV--SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGE 339
           A    +Y  GV  SC    G  L+HGVL+VGY  +G       E PYW+IKNSWGENWGE
Sbjct: 267 ASSFMSYQSGVLTSC---AGISLNHGVLLVGYNRTG-------EVPYWVIKNSWGENWGE 316

Query: 340 NGYYKICMGRNVC 352
           NGY ++ MG N C
Sbjct: 317 NGYVRVTMGVNAC 329


>gi|344271616|ref|XP_003407633.1| PREDICTED: cathepsin L1-like [Loxodonta africana]
          Length = 334

 Score =  207 bits (526), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 123/316 (38%), Positives = 168/316 (53%), Gaps = 21/316 (6%)

Query: 52  HFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVT----KFSDLTPS 107
            ++ ++S + K YA  EE D+R  V++ N++  +R         HG T     F D+T  
Sbjct: 28  QWNQWRSTYKKPYAVNEE-DWRRAVWEKNVKMIERHNQEYSQGKHGFTMAMNAFGDMTNE 86

Query: 108 EFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSAT 167
           EFR+   G   +          P+     +PT  DW   G VT VK+QG CGSCW+FSAT
Sbjct: 87  EFRQVMNGFQNQKHKKGKLFYEPVF--GHIPTSVDWTQKGYVTPVKNQGQCGSCWAFSAT 144

Query: 168 GALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVE 227
           GALEG  F  TG+LVSLSEQ LVDC            + GCNGGLM++AF+Y+   GG++
Sbjct: 145 GALEGQMFRKTGKLVSLSEQNLVDCSRR-------EGNEGCNGGLMDNAFQYVQDNGGLD 197

Query: 228 REKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWM 285
            E+ YPY  TD  +C +     AA  + F  I   E  +   +   GP++V I+A     
Sbjct: 198 SEESYPYLATDTHTCNYKPECSAANDTGFVDIPQREKALMKAVATVGPISVAIDAGHESF 257

Query: 286 QTYIGGVSC-PYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYK 344
           Q Y  G+   P    K LDHGVL+VGY   GF     +   +WI+KNSWG +WG NGY K
Sbjct: 258 QFYKSGIYYEPGCSSKDLDHGVLLVGY---GFEGKDSENNKFWIVKNSWGTSWGTNGYVK 314

Query: 345 ICMGRNV-CGVDSMVS 359
           +   +N  CG+ +  S
Sbjct: 315 MAKDQNNHCGIATAAS 330


>gi|96979798|ref|YP_611001.1| cathepsin [Antheraea pernyi nucleopolyhedrovirus]
 gi|37077647|sp|Q91CL9.1|CATV_NPVAP RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|16041073|dbj|BAB69773.1| cathepsin [Antheraea pernyi nucleopolyhedrovirus]
 gi|94983331|gb|ABF50271.1| cathepsin [Antheraea pernyi nucleopolyhedrovirus]
 gi|146229694|gb|ABQ12259.1| cathepsin [Antheraea pernyi nucleopolyhedrovirus]
          Length = 324

 Score =  207 bits (526), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 114/326 (34%), Positives = 180/326 (55%), Gaps = 28/326 (8%)

Query: 46  LLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLT 105
           LL A  +F  F  KF+K Y+++ E   RF++F+ NL     +   D +A + + KFSDL+
Sbjct: 21  LLKAPSYFEEFLHKFNKNYSSESEKLRRFKIFQHNLEEIINKNQNDTSAQYEINKFSDLS 80

Query: 106 PSEFRRQFLGLNRRLRLPADAQ---KAPIL--PTNDLPTDFDWRDHGAVTGVKDQGACGS 160
             E   ++ GL+    LP   Q   +  +L  P +  P +FDWR    VT VK+QG CG+
Sbjct: 81  KDETISKYTGLS----LPLQKQNFCEVVVLDRPPDKGPLEFDWRRLNKVTSVKNQGMCGA 136

Query: 161 CWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYI 220
           CW+F+  G+LE    +   +L++LSEQQL+DCD           D GC+GGL+++A+E +
Sbjct: 137 CWAFATLGSLESQFAIKHDQLINLSEQQLIDCDF---------VDVGCDGGLLHTAYEAV 187

Query: 221 LKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVG 279
           +  GG++ E DYPY   + G C+ + +K    V   +  ++  E+++   L   GP+ V 
Sbjct: 188 MNMGGIQAENDYPYEANN-GPCRVNAAKFVVRVKKCYRYVTLFEEKLKDLLRIVGPIPVA 246

Query: 280 INAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGE 339
           I+A  +  Y  G+   Y     L+H VL+VGYG            P+WI+KN+WG +WGE
Sbjct: 247 IDASDIVGYKRGI-IRYCENHGLNHAVLLVGYGVENGI-------PFWILKNTWGADWGE 298

Query: 340 NGYYKICMGRNVCGVDSMVSSVAAIH 365
            GY+++    N CG+ + + S A I+
Sbjct: 299 QGYFRVQQNINACGIKNELPSSAEIY 324


>gi|403368476|gb|EJY84073.1| Cathepsin L [Oxytricha trifallax]
          Length = 338

 Score =  207 bits (526), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 127/314 (40%), Positives = 174/314 (55%), Gaps = 25/314 (7%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLL-DPTAVHGVTKFSDLTPSE 108
           +H F+ F +K+ K+Y T+EE+D+R ++FK NL +     +  D T   G+ KF+D T +E
Sbjct: 40  DHAFTNFVAKYGKSYGTKEEYDFRSKLFKQNLAKVSMNNVRNDVTYRLGLNKFADYTEAE 99

Query: 109 FRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATG 168
           ++R  LG   +        K    P ND     +W + GAVT VKDQG CGSCWSFSATG
Sbjct: 100 YKR-LLGFGGQKNKNPRNIKVLGAPKND---GVNWVEQGAVTPVKDQGQCGSCWSFSATG 155

Query: 169 ALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVER 228
           A+EG   +  G L SLSEQQLVDC            + GC GG M+ AF+Y+ +   +E 
Sbjct: 156 AMEGHAKIQFGTLYSLSEQQLVDCSQ-------AEGNEGCGGGWMDQAFQYVEQT-ALET 207

Query: 229 EKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWM--Q 286
           E  YPY   D  +C+   + +    S   V  ++ +++ A L K GP++V I A  M  Q
Sbjct: 208 EDQYPYEAVD-DTCRASSAGVVKVDSFVDVTPNNVNELKAALDK-GPVSVAIEADQMVFQ 265

Query: 287 TYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKIC 346
            Y GGV     CG  LDHGVL VGYG+          + Y+++KNSWG +WGE GY KI 
Sbjct: 266 FYSGGVINDASCGTTLDHGVLAVGYGNE-------SGQDYFLVKNSWGASWGEEGYVKIA 318

Query: 347 MG-RNVCGVDSMVS 359
               N+CG+ S  S
Sbjct: 319 ASPDNICGILSQAS 332


>gi|146215986|gb|ABQ10195.1| actinidin Act2d [Actinidia eriantha]
          Length = 381

 Score =  207 bits (526), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 128/361 (35%), Positives = 192/361 (53%), Gaps = 39/361 (10%)

Query: 8   SLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQ 67
           S+ LL  S++L  + A++  +++ R         + D ++ A +   L +    K+Y + 
Sbjct: 11  SMSLLFFSTLLILSSALDIKNSVQR---------TNDQVM-AMYESWLVEQ--GKSYNSL 58

Query: 68  EEHDYRFRVFKANLRRAKRRQL-LDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADA 126
           +E + RF +FK NLR         + +   G+ +F+DLT  E+R  +LG     +     
Sbjct: 59  DEKEMRFEIFKENLRIIDDHNADANRSYSLGLNRFADLTDEEYRSTYLGFKSGPKAKVSN 118

Query: 127 QKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSE 186
           +  P +    LP   DWR  GAV GVKDQG C SCW+FSA  A+EG + + TG L+SLSE
Sbjct: 119 RYVPKVGV-VLPNYVDWRTVGAVVGVKDQGLCSSCWAFSAVAAVEGINKIVTGNLISLSE 177

Query: 187 QQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDK 246
           Q+LVDC              GCN G MN AF++I+  GG+  E +YPYT  DG    + K
Sbjct: 178 QELVDCGRTQRTR-------GCNRGYMNDAFQFIIDNGGINTEDNYPYTAQDGQCDWYRK 230

Query: 247 SKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKYLDH 304
           ++    + N+  + ++ + +  N V + P+ VG+ +     + Y  G+   Y CG  +DH
Sbjct: 231 NQRYVTIDNYEQLPANNEWVLQNAVAYQPITVGLESEGGKFKLYTSGIYTGY-CGTAIDH 289

Query: 305 GVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNV-----CGVDSMVS 359
           GV IVGYG+        +   YWI+KNSWG NWGENGY +I   RN+     CG+ +MV 
Sbjct: 290 GVTIVGYGTE-------RGLDYWIVKNSWGTNWGENGYIRI--QRNIGGAGKCGI-AMVP 339

Query: 360 S 360
           S
Sbjct: 340 S 340


>gi|15593246|gb|AAL02220.1|AF410880_1 cysteine protease CP7 precursor [Frankliniella occidentalis]
          Length = 333

 Score =  207 bits (526), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 130/334 (38%), Positives = 174/334 (52%), Gaps = 31/334 (9%)

Query: 35  VPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKAN-LRRAKRRQLLDPT 93
           +PSD        +  + H+  FK+  +KTYA   E  YR +VFK N +R AK        
Sbjct: 18  IPSD--------MEIQAHWESFKATHAKTYANAAEEAYRAKVFKENAIRIAKHNDRFASG 69

Query: 94  AVH---GVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVT 150
            V    G  +++D+   E   +  G    L+  +         +       DWR  GAVT
Sbjct: 70  EVTFKVGYNQYADMHTHEVTEKLNGYRSGLKQASAFVHTASNDSWPWSKKVDWRSKGAVT 129

Query: 151 GVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNG 210
            +KDQG CGSCWSFSATG+LEG  FL    LVSLSEQ LVDC  +   E       GCNG
Sbjct: 130 PIKDQGQCGSCWSFSATGSLEGQLFLKNKNLVSLSEQNLVDCSWDFGNE-------GCNG 182

Query: 211 GLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFS-VISSDEDQMAAN 269
           GLM+SAFEY+   GG++ E+ YPYT  D G+C +  +  A   + +  V +  E  +   
Sbjct: 183 GLMDSAFEYVKSYGGIDTEESYPYTAED-GTCLYKAANNAGVNTGYKDVQAKSESALRDA 241

Query: 270 LVKHGPLAVGINAV-W-MQTYIGGVSCPYICGK-YLDHGVLIVGYGSSGFAPIRFKEKPY 326
           + K GP++V I+A  W  Q Y  G+     C    LDHGVL VGYGS       +  K +
Sbjct: 242 VEKVGPVSVAIDASNWSFQMYTSGIYYEPACSSDSLDHGVLAVGYGS------EWPNKEF 295

Query: 327 WIIKNSWGENWGENGYYKICMG-RNVCGVDSMVS 359
           WI+KNSWG +WGE GY K+    +N CG+ +  S
Sbjct: 296 WIVKNSWGTSWGEEGYIKMARNKKNNCGIATEAS 329


>gi|442754503|gb|JAA69411.1| Putative cathepsin l-like cysteine proteinase b [Ixodes ricinus]
          Length = 335

 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 128/331 (38%), Positives = 176/331 (53%), Gaps = 30/331 (9%)

Query: 42  SEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRR-AKRRQLLDPTAV---HG 97
           S   +L AE  +S FK+K  K+Y ++ E  +R +++  N  + AK  +      V     
Sbjct: 18  SYQEVLGAE--WSAFKAKHGKSYVSETEEVFRLKIYMENRHKIAKHNEKYARGEVPYSMA 75

Query: 98  VTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTN----DLPTDFDWRDHGAVTGVK 153
           + +F D+   EF     G  R  +         + P N     LP   DWR  GAVT VK
Sbjct: 76  MNEFGDMLHHEFVSTRNGFKRNYKDQPREGSTYLEPENIEDFSLPKTVDWRTKGAVTPVK 135

Query: 154 DQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLM 213
           +QG CGSCW+FSATG+LEG HF  +G +VSLSEQ LVDC  +         ++GC GGLM
Sbjct: 136 NQGQCGSCWAFSATGSLEGQHFRKSGSMVSLSEQNLVDCSTDFG-------NNGCEGGLM 188

Query: 214 NSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVK 272
           ++AF+YI    G++ EK YPY GTD G+C F KS + A  S F  +    E Q+   +  
Sbjct: 189 DNAFKYIRANKGIDTEKSYPYNGTD-GTCHFKKSTVGATDSGFVDIKEGSETQLKKAVAT 247

Query: 273 HGPLAVGINAVW--MQTYIGGV-SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWII 329
            GP++V I+A     Q Y  GV   P    + LDHGVL+VGYG+            YW++
Sbjct: 248 VGPISVAIDASHESFQFYSDGVYDEPECDSESLDHGVLVVGYGT-------LNGTDYWLV 300

Query: 330 KNSWGENWGENGYYKICMG-RNVCGVDSMVS 359
           KNSWG  WG+ GY ++    +N CG+ S  S
Sbjct: 301 KNSWGTTWGDEGYIRMSRNKKNQCGIASSAS 331


>gi|5823020|gb|AAD53012.1|AF089849_1 senescence-specific cysteine protease [Brassica napus]
          Length = 344

 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 116/293 (39%), Positives = 162/293 (55%), Gaps = 26/293 (8%)

Query: 62  KTYATQEEHDYRFRVFKANLRRAKRRQLLDP--TAVHGVTKFSDLTPSEFRRQFLGLNRR 119
           + YA   E + R+ VFK N+ R +R   +    T    V +F+DLT  EFR  + G    
Sbjct: 47  RVYADANEKNNRYAVFKRNVERIERLNDVQSGLTFKLAVNQFADLTNEEFRSMYTGFKGN 106

Query: 120 LRLPADAQKAPI----LPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHF 175
             L +  +        + ++ LP   DWR  GAVT +KDQG CGSCW+FSA  A+EG   
Sbjct: 107 SVLSSRTKPTSFRYQNVSSDALPVSVDWRKKGAVTPIKDQGLCGSCWAFSAVAAIEGVAQ 166

Query: 176 LSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYT 235
           +  G+L+SLSEQ+LVDCD         + D GC GGLM++AF Y +  GG+  E +YPY 
Sbjct: 167 IKKGKLISLSEQELVDCD---------TNDGGCMGGLMDTAFNYTITIGGLTSESNYPYK 217

Query: 236 GTDGGSCKFDKSK-IAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGV 292
            T+ G+C F+K+K IA ++  F  + +++++     V H P+++GI    +  Q Y  GV
Sbjct: 218 STN-GTCNFNKTKQIATSIKGFEDVPANDEKALMKAVAHHPVSIGIAGGDIGFQFYSSGV 276

Query: 293 SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKI 345
                C  +LDHGV  VGYG S           YWI+KNSWG  WGE GY +I
Sbjct: 277 FSGE-CTTHLDHGVTAVGYGRSK------NGLKYWILKNSWGPKWGERGYMRI 322


>gi|307192137|gb|EFN75465.1| Cathepsin L [Harpegnathos saltator]
          Length = 339

 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 123/323 (38%), Positives = 179/323 (55%), Gaps = 31/323 (9%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRA----KRRQLLDPTAVHGVTKFSDLTPSE 108
           ++ FK    K Y ++ E  +R ++F  N  +     ++ +L + +   G+ K+ D+   E
Sbjct: 28  WNTFKVTHRKAYDSKIEESFRMKIFMENWHKIALHNQKYELNEVSYKLGMNKYGDMLHHE 87

Query: 109 FRRQFLGLNRRLRLPADAQKAPI-----LPTN-DLPTDFDWRDHGAVTGVKDQGACGSCW 162
           F     G N+ +     AQ+ PI      P N ++P+  DWR HGAVT +KDQG CGSCW
Sbjct: 88  FINTLNGFNKSVSAQLRAQRRPIGSRFIEPANVEIPSSVDWRTHGAVTPIKDQGHCGSCW 147

Query: 163 SFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSC-DSGCNGGLMNSAFEYIL 221
           SFSATGALEG H+  TG+LVSLSEQ L+DC        SG   ++GCNGGLM+ AF+YI 
Sbjct: 148 SFSATGALEGQHYRITGKLVSLSEQNLIDC--------SGRYGNNGCNGGLMDQAFQYIK 199

Query: 222 KAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVGI 280
              G++ E  YPY   +   C+++     A  S +  +   +E ++ A +   GP++V I
Sbjct: 200 DNHGLDTEISYPYE-AENDKCRYNPRNNGATDSGYVDIPEGNEKKLKAAVATIGPVSVAI 258

Query: 281 NAVW--MQTYIGGVSC-PYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENW 337
           +A     Q Y  GV   P    + LDHGVL+VGYG+         ++ YW++KNSWG  W
Sbjct: 259 DASAESFQFYREGVYYEPRCSSENLDHGVLVVGYGTDD------NDQDYWLVKNSWGVTW 312

Query: 338 GENGYYKICMGR-NVCGVDSMVS 359
           G+ GY K+   + N CG+ S  S
Sbjct: 313 GDEGYIKMARNKDNHCGIASSAS 335


>gi|151573014|gb|ABS17682.1| cathepsin L-1 [Artemia salina]
          Length = 334

 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 129/327 (39%), Positives = 175/327 (53%), Gaps = 29/327 (8%)

Query: 45  HLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLL----DPTAVHGVTK 100
           +LL  E H  LFK+   K Y +Q E  +R +++  N  +  +  +L    + +    + K
Sbjct: 21  NLLADEWH--LFKATHKKEYPSQLEEKFRMKIYLENKHKVAKHNILYEKGEKSYHVAMNK 78

Query: 101 FSDLTPSEFRRQFLGLNRRLRLPADAQKAPIL--PTN-DLPTDFDWRDHGAVTGVKDQGA 157
           F DL   EFR    G   + +  + A+       P N  +P   DWR+ GA+T VKDQG 
Sbjct: 79  FGDLLHHEFRSIMNGYQHKKQNSSRAESTFTFMEPANVTVPESVDWREKGAITPVKDQGQ 138

Query: 158 CGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAF 217
           CGSCW+FS+TGALEG  F  TG+LVSLSEQ L+DC  +   E       GCNGGLM+ AF
Sbjct: 139 CGSCWAFSSTGALEGQTFRKTGKLVSLSEQNLIDCSGKYGNE-------GCNGGLMDQAF 191

Query: 218 EYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPL 276
           +YI    G++ E  YPY   D   C+++     A    F  + S +ED++ A +   GP+
Sbjct: 192 QYIKDNKGIDTENTYPYEAED-DVCRYNPRNRGAVDRGFVDIPSGEEDKLKAAVATVGPV 250

Query: 277 AVGINAVW--MQTYIGGVSCPYIC-GKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSW 333
           +V I+A     Q Y  GV     C    LDHGVL+VGYGS          K YW++KNSW
Sbjct: 251 SVAIDASHESFQFYSKGVYYEPSCDSDDLDHGVLVVGYGSD-------NGKDYWLVKNSW 303

Query: 334 GENWGENGYYKICMGR-NVCGVDSMVS 359
            E+WG+ GY K+   R N CGV S  S
Sbjct: 304 SEHWGDEGYIKMARNRKNHCGVASAAS 330


>gi|260516678|gb|ACX43965.1| cysteine protease 1 [Brachiaria hybrid cultivar]
          Length = 338

 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 128/330 (38%), Positives = 175/330 (53%), Gaps = 30/330 (9%)

Query: 29  AMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAK-RR 87
           A+  + VPS+        +  +  F+ F  ++SK Y +  E   RF  FKAN+   +   
Sbjct: 26  ALFSEEVPSE--------VMLQDMFTAFMKQYSKAY-SHAEFSSRFNQFKANVETIRLHN 76

Query: 88  QLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHG 147
            L + +   G+ +F+DL+  EF+ ++ G     R  A +           PT  DWR   
Sbjct: 77  TLANASYTMGLNEFADLSFEEFKGKYFGYKHVEREFARSNNLH-QEVEAAPTSIDWRTSN 135

Query: 148 AVTGVKDQGACGSCWSFSATGALEGAHFLSTGE-LVSLSEQQLVDCDHECDPEESGSCDS 206
           AVT +KDQG CGSCW+FSATG++EGA  L     L SLSEQQLVDC        +   D+
Sbjct: 136 AVTPIKDQGQCGSCWAFSATGSIEGAWVLQGKHTLTSLSEQQLVDCS-------TSYGDA 188

Query: 207 GCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQM 266
           GCNGGLM+ AFEYI+   G+  E  YPY G  GG C+   +K+        V S DE  +
Sbjct: 189 GCNGGLMDYAFEYIIANKGICAESAYPYKGV-GGLCQKSCTKVVTISGYKDVASGDEASL 247

Query: 267 AANLVKHGPLAVGINA--VWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEK 324
              +   GP++V I A     Q Y  GV     CG  LDHGVL VGYG++G        +
Sbjct: 248 LNAVGTVGPVSVAIEADQAGFQFYSSGVFSG-TCGHNLDHGVLAVGYGTTG-------SQ 299

Query: 325 PYWIIKNSWGENWGENGYYKICMGRNVCGV 354
            YWI+KNSWG +WGE+GY ++   +N CG+
Sbjct: 300 DYWIVKNSWGTSWGESGYIRMIRNKNQCGI 329


>gi|374713651|gb|AEZ65083.1| cysteine protease [Carica papaya]
          Length = 467

 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 129/371 (34%), Positives = 195/371 (52%), Gaps = 35/371 (9%)

Query: 1   MERLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKF 60
           + R  LS  LL++ ++  A  +++   D   ++       +++D ++     +  +  K 
Sbjct: 3   LHRSSLSLFLLMIFTASSAVDMSIVSYD---QRHADKSSWRTDDEVM---AMYEAWLVKH 56

Query: 61  SKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGL---- 116
            K Y    E + RF +FK NLR        + T   G+ +F+DLT  E+R  +LG+    
Sbjct: 57  GKAYNALGEKEKRFGIFKDNLRFIDEHNSQNLTYRLGLNRFADLTNEEYRSMYLGVKPGA 116

Query: 117 ---NRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGA 173
               R++   +D   A +   + LP   DWR  GAV GVKDQG+CGSCW+FS   A+EG 
Sbjct: 117 TRVTRKVSRKSDRFAARV--GDALPDFIDWRKEGAVVGVKDQGSCGSCWAFSTIAAVEGI 174

Query: 174 HFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYP 233
           + + TG+L+SLSEQ+LVDCD         S + GCNGGLM+ AFE+I+  GG++ E+DYP
Sbjct: 175 NQIVTGDLISLSEQELVDCDT--------SYNEGCNGGLMDYAFEFIINNGGIDSEEDYP 226

Query: 234 YTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGG 291
           Y   D    ++ K+    ++  +  +  +++      V   P++V I A     Q Y  G
Sbjct: 227 YRAADQKCDQYRKNANVVSIDGYEDVPENDEAALKKAVAKQPVSVAIEAGGRAFQLYQSG 286

Query: 292 VSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNV 351
           V     CG  LDHGV  VGYG+          + YWI+ NSWG+NWGE+GY +  M RN+
Sbjct: 287 VFTGK-CGTSLDHGVAAVGYGTE-------NGQDYWIVGNSWGKNWGEDGYIR--MERNL 336

Query: 352 CGVDSMVSSVA 362
            G  S    +A
Sbjct: 337 AGSSSGKCGIA 347


>gi|21666724|gb|AAM73806.1|AF448505_1 cysteine proteinase [Brassica napus]
 gi|21666726|gb|AAM73807.1|AF448506_1 cysteine proteinase [Brassica napus]
          Length = 343

 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 116/293 (39%), Positives = 160/293 (54%), Gaps = 26/293 (8%)

Query: 62  KTYATQEEHDYRFRVFKANLRRAKRRQLLD--PTAVHGVTKFSDLTPSEFRRQFLGLNRR 119
           + YA   E + R+ VFK N+   +R   +    T    V +F+DLT  EFR  + G    
Sbjct: 46  RVYADANEKNNRYVVFKRNVESIERLNEVQYGLTFKLAVNQFADLTNEEFRSMYTGYKGN 105

Query: 120 LRLPADAQKAPI----LPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHF 175
             L +  +        + ++ LP   DWR  GAVT +KDQG+CGSCW+FSA  A+EG   
Sbjct: 106 SVLSSRTKPTSFRYQHVSSDALPISVDWRKKGAVTPIKDQGSCGSCWAFSAVAAIEGVAQ 165

Query: 176 LSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYT 235
           +  G+L+SLSEQ+LVDCD         + D GC GG MNSAF Y +  GG+  E +YPY 
Sbjct: 166 IKKGKLISLSEQELVDCD---------TNDDGCMGGYMNSAFNYTMTTGGLTSESNYPYK 216

Query: 236 GTDGGSCKFDKSK-IAAAVSNFSVISSDEDQMAANLVKHGPLAVGI--NAVWMQTYIGGV 292
            TD G+C  +K+K IA ++  F  + +++++     V H P+++GI       Q Y  GV
Sbjct: 217 STD-GTCNINKTKQIATSIKGFEDVPANDEKALMKAVAHHPVSIGIAGGGTGFQFYSSGV 275

Query: 293 SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKI 345
                C  +LDHGV +VGYG S           YWI+KNSWG  WGE GY +I
Sbjct: 276 FSGE-CSTHLDHGVAVVGYGKSS------NGSKYWILKNSWGPKWGERGYMRI 321


>gi|71400414|ref|XP_803044.1| cysteine peptidase [Trypanosoma cruzi strain CL Brener]
 gi|70865609|gb|EAN81598.1| cysteine peptidase, putative [Trypanosoma cruzi]
          Length = 467

 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 132/368 (35%), Positives = 183/368 (49%), Gaps = 53/368 (14%)

Query: 4   LILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKT 63
           L L+++L+++   V A+  +++ ++ +  Q                   F+ FK K  + 
Sbjct: 8   LSLAAVLVVMACLVPAATASLHAEETLASQ-------------------FAEFKQKHGRV 48

Query: 64  YATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ-------FLGL 116
           Y +  E  +R  VF+ANL  A+     +P A  GVT FSDLT  EFR +       F   
Sbjct: 49  YGSAAEEAFRLSVFRANLFLARLHAAANPHATFGVTPFSDLTREEFRSRYHNGAAHFAAA 108

Query: 117 NRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFL 176
             R R+P D +          P   DWR+ GAVT VK+QG CGSCW+F+A G +E   FL
Sbjct: 109 QERARVPVDVEFV------GAPAAKDWREEGAVTAVKNQGMCGSCWAFAAIGNIECQWFL 162

Query: 177 STGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYIL--KAGGVEREKDYPY 234
           +   L  LSEQ LV CD+          +SGC GG    AF++I+    G V  E+ YPY
Sbjct: 163 AGNPLTRLSEQMLVSCDNT---------NSGCGGGWPLVAFKWIVDRNNGTVYTEESYPY 213

Query: 235 TGTDGGS--CKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGV 292
               G S  C      + A ++ +  I  DE+ +AA L  +GP+AV ++A     Y GGV
Sbjct: 214 HSCIGISPPCTTSGHTVGATITGYVTIPRDENGIAAWLAVNGPVAVVVDASSWIFYTGGV 273

Query: 293 SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVC 352
               +  K L H VL+VGY  S          P+WIIKNSW  +WGE+GY +I  G N C
Sbjct: 274 MTSCV-SKQLSHAVLLVGYNDSA-------TVPHWIIKNSWTTHWGEDGYIRIAKGSNQC 325

Query: 353 GVDSMVSS 360
            V   VSS
Sbjct: 326 LVKEGVSS 333


>gi|288548564|gb|ADC52430.1| cathepsin L1 cysteine protease [Pinctada fucata]
          Length = 331

 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 122/319 (38%), Positives = 169/319 (52%), Gaps = 25/319 (7%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH----GVTKFSDLT 105
           +  ++++K  F+K Y   EE   R  V++ N+   ++         H    G  +++D+T
Sbjct: 25  DQEWAIYKDMFAKNYVADEERMRRL-VWEDNIDYIEKHNRRADRGEHKFWLGTNEYADMT 83

Query: 106 PSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFS 165
             EF+    G   +     D   +P     DLP   DWRD G VT VK+QG CGSCWSFS
Sbjct: 84  IDEFKAIMNGFIMQNGTKGDTYMSPS-NIGDLPDKVDWRDKGYVTPVKNQGHCGSCWSFS 142

Query: 166 ATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGG 225
           ATG+LEG HF STG+LVSLSEQ L+DC  +         + GC GGLM+ AFEYI K  G
Sbjct: 143 ATGSLEGQHFKSTGKLVSLSEQNLIDCSKK-------EGNHGCKGGLMDFAFEYIQKNDG 195

Query: 226 VEREKDYPYTGTDGGSCKFDKSKIAAA-VSNFSVISSDEDQMAANLVKHGPLAVGINA-- 282
           ++ E+ YPYT  DG  C+F K+ + A       +    E  +   +   GP++V ++A  
Sbjct: 196 IDTEQSYPYTAKDGIECRFKKADVGATDKGKVDLPRQSEKALQEAVATVGPISVAMDAGH 255

Query: 283 VWMQTYIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENG 341
              Q Y  G+    +C    LDHGVL VGYGS G       E  YW++KNSWG  WG  G
Sbjct: 256 RSFQLYKRGIYTEPMCSSTKLDHGVLAVGYGSEG-------EGDYWLVKNSWGATWGMEG 308

Query: 342 YYKICMG-RNVCGVDSMVS 359
           ++ +    RN CG+ +  S
Sbjct: 309 FFMLARNHRNECGIATQAS 327


>gi|116786779|gb|ABK24233.1| unknown [Picea sitchensis]
          Length = 463

 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 131/359 (36%), Positives = 194/359 (54%), Gaps = 27/359 (7%)

Query: 11  LLLLSSVLA-SAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEE 69
           +LLL +VLA SA+A +   A    +     +  ED  +     + L+ ++  K Y    E
Sbjct: 3   ILLLFAVLALSAMAGSASRADFSIIGYDSKDLREDDAI--MELYELWLAQHKKAYNGLGE 60

Query: 70  HDYRFRVFKAN-LRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLG--LNRRLRLP-AD 125
              RF VFK N L   +     +P+   G+ +F+DL+  EF+  +LG  L+ + RL  + 
Sbjct: 61  KQNRFSVFKDNFLYIHQHNNQGNPSYKLGLNQFADLSHEEFKATYLGAKLDTKKRLSNSP 120

Query: 126 AQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLS 185
           + +       DLP   DWR+ GAVT VKDQG+CGSCW+FS   A+EG + + TG L SLS
Sbjct: 121 SPRYQYSDGEDLPESIDWREKGAVTAVKDQGSCGSCWAFSTVAAVEGINQIVTGNLTSLS 180

Query: 186 EQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFD 245
           EQ+LVDCD         S + GCNGGLM+ AF++I+  GG++ E DYPY   DG    + 
Sbjct: 181 EQELVDCDT--------SYNQGCNGGLMDYAFQFIINNGGLDSEDDYPYKANDGSCDAYR 232

Query: 246 KSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAV--WMQTYIGGVSCPYICGKYLD 303
           K+     + ++  +  ++++       + P++V I A     Q Y  GV     CG  LD
Sbjct: 233 KNAHVVTIDDYEDVPENDEKSLKKAAANQPISVAIEASGRAFQFYESGVFTS-TCGTQLD 291

Query: 304 HGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVA 362
           HGV +VGYGS            YWI+KNSWG++WGE G+ +  + RN+ GV + +  +A
Sbjct: 292 HGVTLVGYGSE-------SGTDYWIVKNSWGKSWGEKGFIR--LQRNIEGVSTGMCGIA 341


>gi|162463464|ref|NP_001104879.1| cysteine proteinase Mir3 precursor [Zea mays]
 gi|2425066|gb|AAB88263.1| cysteine proteinase Mir3 [Zea mays]
          Length = 480

 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 123/327 (37%), Positives = 178/327 (54%), Gaps = 34/327 (10%)

Query: 35  VPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTA 94
           + S GE++++    A   ++ + +   +TY      + R++VF+ NLR            
Sbjct: 29  IVSYGERTDEE---ARRMYAEWMAAHGRTYNAVGAEERRYQVFRDNLRYIDAHNAAADAG 85

Query: 95  VH----GVTKFSDLTPSEFRRQFLGLNRR----LRLPADAQKAPILPTNDLPTDFDWRDH 146
           VH    G+ +F+DLT  E+   +LG   R     +L A    A      DLP   DWR  
Sbjct: 86  VHSFRLGLNRFADLTNDEYPATYLGARTRPQRDRKLGARYHAAD---NEDLPESVDWRAK 142

Query: 147 GAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDS 206
           GAV  VKDQG+CG+CW+FS   A+EG + + TG+L+SLSEQ+LVDCD         S + 
Sbjct: 143 GAVAEVKDQGSCGTCWAFSTIAAVEGINQIVTGDLISLSEQELVDCDT--------SYNQ 194

Query: 207 GCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQM 266
           GCNGGLM+ AFE+I+  GG++ EKDYPY GTDG      K+     + ++  + +++++ 
Sbjct: 195 GCNGGLMDYAFEFIINNGGIDTEKDYPYKGTDGRCDVNRKNAKVVTIDSYEDVPANDEKS 254

Query: 267 AANLVKHGPLAVGINA--VWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEK 324
               V + P++V I A     Q Y  G+     CG  LDHGV  VGYG+          K
Sbjct: 255 LQKAVANQPVSVAIEAAGTAFQLYSSGIFTG-SCGTRLDHGVTAVGYGTE-------NGK 306

Query: 325 PYWIIKNSWGENWGENGYYKICMGRNV 351
            YWI+KNSWG +WGE+GY +  M RN+
Sbjct: 307 DYWIVKNSWGSSWGESGYVR--MERNI 331


>gi|4886998|gb|AAD32136.1|AF121837_1 cathepsin L [Mus musculus]
 gi|4887000|gb|AAD32137.1|AF121838_1 cathepsin L [Mus musculus]
 gi|4887002|gb|AAD32138.1|AF121839_1 cathepsin L [Mus musculus]
 gi|200501|gb|AAA39984.1| preprocathepsin L precursor [Mus musculus]
          Length = 334

 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 126/324 (38%), Positives = 173/324 (53%), Gaps = 24/324 (7%)

Query: 44  DHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHG----VT 99
           D   +AE H   +KS   + Y T EE ++R  +++ N+R  +          HG    + 
Sbjct: 22  DQTFSAEWH--QWKSTHRRLYGTNEE-EWRRAIWEKNMRIIQLHNGEYSNGQHGFSMEMN 78

Query: 100 KFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACG 159
            F D+T  EFR+   G   +        + P++    +P   DWR+ G VT VK+QG CG
Sbjct: 79  AFGDMTNEEFRQVVNGYRHQKHKKGRLFQEPLMLK--IPKSVDWREKGCVTPVKNQGQCG 136

Query: 160 SCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEY 219
           SCW+FSA+G LEG  FL TG+L+SLSEQ LVDC H          + GCNGGLM+ AF+Y
Sbjct: 137 SCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSH-------AQGNQGCNGGLMDFAFQY 189

Query: 220 ILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVG 279
           I + GG++ E+ YPY   D GSCK+      A  + F  I   E  +   +   GP++V 
Sbjct: 190 IKENGGLDSEESYPYEAKD-GSCKYRAEFAVANDTGFVDIPQQEKALMKAVATVGPISVA 248

Query: 280 INAVW--MQTYIGGVSC-PYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGEN 336
           ++A    +Q Y  G+   P    K LDHGVL+VGYG  G    + K   YW++KNSWG  
Sbjct: 249 MDASHPSLQFYSSGIYYEPNCSSKNLDHGVLLVGYGYEGTDSNKNK---YWLVKNSWGSE 305

Query: 337 WGENGYYKICMGR-NVCGVDSMVS 359
           WG  GY KI   R N CG+ +  S
Sbjct: 306 WGMEGYIKIAKDRDNHCGLATAAS 329


>gi|340727787|ref|XP_003402217.1| PREDICTED: cathepsin L-like [Bombus terrestris]
          Length = 343

 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 134/367 (36%), Positives = 190/367 (51%), Gaps = 50/367 (13%)

Query: 9   LLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQE 68
           L L L+ +VLA+A A+                 S   L+N E  ++ FK + +K Y    
Sbjct: 3   LFLFLIVAVLATAQAI-----------------SFFELVNQE--WTTFKMEHNKVYKNDV 43

Query: 69  EHDYRFRVFKANLRRAKRR----QLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPA 124
           E  +R ++F  N  +  +     ++   +    + K+ D+   EF     G N+ +    
Sbjct: 44  EERFRMKIFMDNKHKIAKHNGNYEMKKVSYKLKMNKYGDMLHHEFVNTLNGFNKSINTQL 103

Query: 125 DAQKAPIL-----PTND-LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLST 178
            +++ PI      P N  LP   DWR+HGAVT VKDQG CGSCWSFSATGALEG HF  T
Sbjct: 104 RSERLPIAASFIEPANVVLPKTVDWREHGAVTPVKDQGHCGSCWSFSATGALEGQHFRRT 163

Query: 179 GELVSLSEQQLVDCDHECDPEESGSC-DSGCNGGLMNSAFEYILKAGGVEREKDYPYTGT 237
           G L+ LSEQ L+DC        SG   ++GCNGGLM+ AF+YI    G++ E  YPY   
Sbjct: 164 GILIPLSEQNLIDC--------SGKYGNNGCNGGLMDQAFQYIKDNKGLDTEVTYPYE-A 214

Query: 238 DGGSCKFDKSKIAAA-VSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSC 294
           +   C+++ +   A  V    +   +E ++ A +   GP++V I+A     Q Y  GV  
Sbjct: 215 ENDKCRYNAANSGARDVGYVDIPQGNEKKLKAAVATIGPVSVAIDASHQSFQFYSEGVYY 274

Query: 295 -PYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVC 352
            P    + LDHGVL VGYG+          + YW++KNSWGE WG+NGY K+   + N C
Sbjct: 275 EPECSSENLDHGVLAVGYGTDE------NGQDYWLVKNSWGETWGDNGYIKMARNKLNHC 328

Query: 353 GVDSMVS 359
           G+ S  S
Sbjct: 329 GIASTAS 335


>gi|350412176|ref|XP_003489564.1| PREDICTED: cathepsin L-like [Bombus impatiens]
          Length = 343

 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 134/367 (36%), Positives = 191/367 (52%), Gaps = 50/367 (13%)

Query: 9   LLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQE 68
           L LLL+ ++LA+A A+                 S   L+N E  ++ FK + +K Y    
Sbjct: 3   LFLLLIVAILATAQAI-----------------SFFELVNQE--WTTFKMEHNKVYKNDI 43

Query: 69  EHDYRFRVFKANLRRAKRR----QLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPA 124
           E  +R ++F  N  +  +     ++   +    + K+ D+   EF     G N+ +    
Sbjct: 44  EERFRMKIFMDNKHKIAKHNGNYEMKKVSYKLKMNKYGDMLHHEFVNTLNGFNKSINTQL 103

Query: 125 DAQKAPI-----LPTND-LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLST 178
            +++ PI      P N  LP   DWR+HGAVT VKDQG CGSCWSFSATGALEG HF  T
Sbjct: 104 RSERLPIGASFIEPANVVLPKTVDWREHGAVTPVKDQGHCGSCWSFSATGALEGQHFRRT 163

Query: 179 GELVSLSEQQLVDCDHECDPEESGSC-DSGCNGGLMNSAFEYILKAGGVEREKDYPYTGT 237
           G L+ LSEQ L+DC        SG   ++GCNGGLM+ AF+YI    G++ E  YPY   
Sbjct: 164 GILIPLSEQNLIDC--------SGKYGNNGCNGGLMDQAFQYIKDNKGLDTEVTYPYE-A 214

Query: 238 DGGSCKFDKSKIAAA-VSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSC 294
           +   C+++ +   A  V    +   +E ++ A +   GP++V I+A     Q Y  GV  
Sbjct: 215 ENDKCRYNAANSGARDVGYVDIPQGNEKKLKAAVATIGPVSVAIDASHQSFQFYSEGVYY 274

Query: 295 -PYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVC 352
            P    + LDHGVL VGYG+          + YW++KNSWGE WG+NGY K+   + N C
Sbjct: 275 EPECSSENLDHGVLAVGYGTDE------NGQDYWLVKNSWGETWGDNGYIKMARNKLNHC 328

Query: 353 GVDSMVS 359
           G+ S  S
Sbjct: 329 GIASTAS 335


>gi|332375975|gb|AEE63128.1| unknown [Dendroctonus ponderosae]
          Length = 338

 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 127/324 (39%), Positives = 171/324 (52%), Gaps = 25/324 (7%)

Query: 49  AEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH----GVTKFSDL 104
            +  ++ FK +  K Y ++ E  +R ++F  N  +  +   L    ++     + K+ DL
Sbjct: 23  VQEQWNSFKVQHKKQYESETEERFRMKIFMDNSHKVAKHNKLFEQGLYPYKLAMNKYGDL 82

Query: 105 TPSEFRRQFLGLNRRL----RLPADAQKAPILPTN-DLPTDFDWRDHGAVTGVKDQGACG 159
              EF     G NR      R         I P + D+P   DWR  GAVT VKDQG CG
Sbjct: 83  LHHEFVGLLNGFNRTKTYLKRGELQDSITFIEPAHVDIPDTVDWRQEGAVTPVKDQGHCG 142

Query: 160 SCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEY 219
           SCWSFSATGALEG HF  T +LVSLSEQ LVDC        S   ++GCNGGLM++AF Y
Sbjct: 143 SCWSFSATGALEGQHFRQTKKLVSLSEQNLVDC-------SSRFGNNGCNGGLMDNAFRY 195

Query: 220 ILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVG 279
           I   GG++ E  YPY G D       K++ A       + S DED++ A +   GP+++ 
Sbjct: 196 IKNNGGIDTEAAYPYMGEDEKFRYSAKNRGATDKGFVDIPSGDEDKLKAAVATVGPISIA 255

Query: 280 INAVW--MQTYIGGV-SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGEN 336
           I+A     Q Y  GV S P      LDHGVL+VGYG+     +      YW++KNSWG+ 
Sbjct: 256 IDASHESFQLYSNGVYSDPTCSSTELDHGVLVVGYGTDEKTGM-----DYWLVKNSWGDT 310

Query: 337 WGENGYYKICMGR-NVCGVDSMVS 359
           WG +GY K+   + N CGV +  S
Sbjct: 311 WGLDGYIKMARNQDNQCGVATQAS 334


>gi|21483190|gb|AAL14223.1| cathepsin L [Dictyocaulus viviparus]
          Length = 347

 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 133/318 (41%), Positives = 171/318 (53%), Gaps = 31/318 (9%)

Query: 56  FKSKFSKTYATQEEHDYRFRVFKANL----RRAKRRQLLDPTAVHGVTKFSDLTPSEFRR 111
           +K K+ K Y  +EE+DY    F  N+          +L   T   G+   +DL  SE+R+
Sbjct: 43  YKIKYDKHYDPEEENDY-MEAFVKNMIHIEEHNHEHRLGRKTFEMGLNNIADLPFSEYRK 101

Query: 112 QFLGLNRRLRLPADAQKAP----ILPTN-DLPTDFDWRDHGAVTGVKDQGACGSCWSFSA 166
             L   R  RL  D+ +      ++P N   P   DWR+H  VT VK+QG CGSCW+FSA
Sbjct: 102 --LNGYRHRRLFGDSMRKNGTKFLVPFNVKAPDSVDWREHNLVTPVKNQGMCGSCWAFSA 159

Query: 167 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGV 226
           TGALEG HF +TG+LVSLSEQ LVDC        +   + GCNGGLM+ AFEYI    G+
Sbjct: 160 TGALEGQHFRATGKLVSLSEQNLVDC-------STKYGNHGCNGGLMDLAFEYIKDNHGI 212

Query: 227 EREKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVGINA--V 283
           + E+ YPY G +   C F K  I A    F  +   DED +   +   GP+++ I+A   
Sbjct: 213 DTEEGYPYVGKE-MRCHFKKRDIGAEDRGFVDLPEGDEDALKVAVATQGPISIAIDAGHR 271

Query: 284 WMQTYIGGVSCPYIC-GKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGY 342
             Q Y  GV     C  + LDHGVL+VGYG+   A        YWIIKNSWG  WGE GY
Sbjct: 272 SFQLYKKGVYFDEECSSEELDHGVLLVGYGTDPEAG------DYWIIKNSWGTKWGEKGY 325

Query: 343 YKICMGRNV-CGVDSMVS 359
            +I   RN  CGV +  S
Sbjct: 326 VRIARNRNNHCGVATKAS 343


>gi|171702829|dbj|BAG16370.1| cysteine protease [Brassica oleracea var. italica]
          Length = 332

 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 116/293 (39%), Positives = 160/293 (54%), Gaps = 26/293 (8%)

Query: 62  KTYATQEEHDYRFRVFKANLRRAKRRQLLDP--TAVHGVTKFSDLTPSEFRRQFLGLNRR 119
           + YA   E + R+ VFK N+   +R   +    T    V +F+DLT  EFR  + G    
Sbjct: 40  RVYADANEKNNRYVVFKRNVESIERLNEVQYGLTFKLAVNQFADLTNEEFRSMYTGYKGN 99

Query: 120 LRLPADAQKAPI----LPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHF 175
             L +  +        + ++ LP   DWR  GAVT +KDQG+CGSCW+FSA  A+EG   
Sbjct: 100 SVLSSRTKPTSFRYQHVSSDALPISVDWRKKGAVTPIKDQGSCGSCWAFSAVAAIEGVAQ 159

Query: 176 LSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYT 235
           +  G+L+SLSEQ+LVDCD         + D GC GG MNSAF Y +  GG+  E +YPY 
Sbjct: 160 IKKGKLISLSEQELVDCD---------TNDDGCMGGYMNSAFNYTMTTGGLTSESNYPYK 210

Query: 236 GTDGGSCKFDKSK-IAAAVSNFSVISSDEDQMAANLVKHGPLAVGI--NAVWMQTYIGGV 292
            TD G+C  +K+K IA ++  F  + +++++     V H P+++GI       Q Y  GV
Sbjct: 211 STD-GTCNINKTKQIATSIKGFEDVPANDEKALMKAVAHHPVSIGIAGGGTGFQFYSSGV 269

Query: 293 SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKI 345
                C  +LDHGV +VGYG S           YWI+KNSWG  WGE GY +I
Sbjct: 270 FSGE-CSTHLDHGVAVVGYGKSSNGS------KYWILKNSWGPKWGERGYMRI 315


>gi|15593252|gb|AAL02222.1|AF410882_1 cysteine protease CP14 precursor [Frankliniella occidentalis]
          Length = 333

 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 130/334 (38%), Positives = 174/334 (52%), Gaps = 31/334 (9%)

Query: 35  VPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKAN-LRRAKRRQLLDPT 93
           +PSD        +  + H+  FK+  +KTYA   E  YR +VFK N +R AK        
Sbjct: 18  IPSD--------MEIQAHWESFKATHAKTYANAVEEAYRAKVFKENAIRIAKHNDRFASG 69

Query: 94  AVH---GVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVT 150
            V    G  +++D+   E   +  G    L+  +         +       DWR  GAVT
Sbjct: 70  EVTFKVGYNQYADMHTHEVTEKLNGYRSGLKQASAFVHTASNDSWPWSKKVDWRSKGAVT 129

Query: 151 GVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNG 210
            +KDQG CGSCWSFSATG+LEG  FL    LVSLSEQ LVDC  +   E       GCNG
Sbjct: 130 PIKDQGQCGSCWSFSATGSLEGQLFLKNKNLVSLSEQNLVDCSWDFGNE-------GCNG 182

Query: 211 GLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFS-VISSDEDQMAAN 269
           GLM+SAFEY+   GG++ E+ YPYT  D G+C +  +  A   + +  V +  E  +   
Sbjct: 183 GLMDSAFEYVKSNGGIDTEESYPYTAED-GTCLYKAANNAGVNTGYKDVQAKSESALRDA 241

Query: 270 LVKHGPLAVGINAV-W-MQTYIGGVSCPYICGK-YLDHGVLIVGYGSSGFAPIRFKEKPY 326
           + K GP++V I+A  W  Q Y  G+     C    LDHGVL VGYGS       +  K +
Sbjct: 242 VEKVGPVSVAIDASNWSFQMYTSGIYYEPACSSDSLDHGVLAVGYGS------EWPNKEF 295

Query: 327 WIIKNSWGENWGENGYYKICMG-RNVCGVDSMVS 359
           WI+KNSWG +WGE GY K+    +N CG+ +  S
Sbjct: 296 WIVKNSWGTSWGEEGYIKMARNKKNNCGIATEAS 329


>gi|55740406|gb|AAV63979.1| cathepsin L1 precursor [Artemia parthenogenetica]
          Length = 338

 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 128/327 (39%), Positives = 175/327 (53%), Gaps = 29/327 (8%)

Query: 45  HLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLL----DPTAVHGVTK 100
           +LL  E H  LFK+   K Y +Q E   R +++  N  +  +  +L    + +    + K
Sbjct: 25  NLLADEWH--LFKATHKKEYPSQLEEKLRMKIYLENKHKVAKHNILYEKGEKSYQVAMNK 82

Query: 101 FSDLTPSEFRRQFLGLNRRLRLPADAQKAPIL--PTN-DLPTDFDWRDHGAVTGVKDQGA 157
           F DL   EFR    G   + +  + A+       P N ++P   DWR+ GA+T VKDQG 
Sbjct: 83  FGDLLHHEFRSIMNGYQHKKQNSSRAESTFTFMEPANVEVPESVDWREKGAITPVKDQGQ 142

Query: 158 CGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAF 217
           CGSCW+FS+TGALEG  F  TG+LVSLSEQ L+DC  +   E       GCNGGLM+ AF
Sbjct: 143 CGSCWAFSSTGALEGQTFRKTGKLVSLSEQNLIDCSGKYGNE-------GCNGGLMDQAF 195

Query: 218 EYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPL 276
           +YI    G++ E  YPY   D G C+++     A    F  + S +ED++ A +   GP+
Sbjct: 196 QYIKDNKGIDTENTYPYEAED-GVCRYNPRNRGAVDRGFVDIPSGEEDKLKAAVATVGPV 254

Query: 277 AVGINAVW--MQTYIGGVSCPYIC-GKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSW 333
           +V I+A     Q Y  G      C    LDHGVL+VGYGS          + YW++KNSW
Sbjct: 255 SVAIDASHESFQFYSKGXYYEPSCDSDDLDHGVLVVGYGSDN-------GEDYWLVKNSW 307

Query: 334 GENWGENGYYKICMGR-NVCGVDSMVS 359
            E+WG+ GY KI   R N CGV +  S
Sbjct: 308 SEHWGDEGYIKIARNRKNHCGVATAAS 334


>gi|171702841|dbj|BAG16376.1| cysteine protease [Brassica rapa var. perviridis]
          Length = 333

 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 116/297 (39%), Positives = 164/297 (55%), Gaps = 26/297 (8%)

Query: 58  SKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP--TAVHGVTKFSDLTPSEFRRQFLG 115
           ++  + YA   E + R+ VFK N+ R +R   +    T    V +F+DLT  EFR  + G
Sbjct: 37  TEHGRVYADANEKNNRYAVFKRNVERIERLNDVQSGLTFKLAVNQFADLTNEEFRSMYTG 96

Query: 116 LNRRLRLPADAQKAPI----LPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALE 171
                 L +  +        + ++ LP   DWR  GAVT +KDQG CGSCW+FSA  A+E
Sbjct: 97  FKGNSVLSSRTKPTSFRYQNVSSDALPVSVDWRKKGAVTPIKDQGLCGSCWAFSAVAAIE 156

Query: 172 GAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKD 231
           G   +  G+L+SLSEQ+LVDCD         + D GC GGLM++AF Y +  GG+  E +
Sbjct: 157 GVAQIKKGKLISLSEQELVDCD---------TNDGGCMGGLMDTAFNYTITIGGLTSESN 207

Query: 232 YPYTGTDGGSCKFDKSK-IAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTY 288
           YPY  T+ G+C F+K+K IA ++  F  + +++++     V H P+++GI    +  Q Y
Sbjct: 208 YPYKSTN-GTCNFNKTKQIATSIKGFEDVPANDEKALMKAVAHHPVSIGIAGGDIGFQFY 266

Query: 289 IGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKI 345
             GV     C  +LDHGV  VGYG S           YWI+KNSWG  WGE GY +I
Sbjct: 267 SSGVFSGE-CTTHLDHGVTAVGYGRSKNGL------KYWILKNSWGPKWGERGYMRI 316


>gi|403333364|gb|EJY65772.1| Cathepsin L [Oxytricha trifallax]
          Length = 338

 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 127/314 (40%), Positives = 173/314 (55%), Gaps = 25/314 (7%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLL-DPTAVHGVTKFSDLTPSE 108
           +H F+ F +K+ K+Y T+EE+D+R ++FK NL +        D T   G+ KF+D T +E
Sbjct: 40  DHAFTNFVAKYGKSYGTKEEYDFRSKLFKQNLAKVSMNNARNDVTYRLGLNKFADYTEAE 99

Query: 109 FRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATG 168
           ++R  LG   +        K    P ND     +W + GAVT VKDQG CGSCWSFSATG
Sbjct: 100 YKR-LLGFGGQKNKNPRNIKVLGAPKND---GVNWVEQGAVTPVKDQGQCGSCWSFSATG 155

Query: 169 ALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVER 228
           A+EG   +  G L SLSEQQLVDC            + GC GG M+ AF+Y+ +   +E 
Sbjct: 156 AMEGHAKIQFGTLYSLSEQQLVDCSQ-------AEGNEGCGGGWMDQAFQYVEQT-ALET 207

Query: 229 EKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWM--Q 286
           E  YPY   D  +C+   + +    S   V  ++ +++ A L K GP++V I A  M  Q
Sbjct: 208 EDQYPYEAVD-DTCRASSAGVVKVDSFVDVTPNNVNELKAALDK-GPVSVAIEADQMVFQ 265

Query: 287 TYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKIC 346
            Y GGV     CG  LDHGVL VGYG+          + Y+++KNSWG +WGE GY KI 
Sbjct: 266 FYSGGVINDASCGTTLDHGVLAVGYGNE-------SGQDYFLVKNSWGASWGEEGYVKIA 318

Query: 347 MG-RNVCGVDSMVS 359
               N+CG+ S  S
Sbjct: 319 ASPDNICGILSQAS 332


>gi|2160175|gb|AAB60738.1| Strong similarity to Dianthus cysteine proteinase (gb|U17135)
           [Arabidopsis thaliana]
          Length = 416

 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 129/335 (38%), Positives = 181/335 (54%), Gaps = 45/335 (13%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLL-DPTAVHGVTKFSDLTPSEFRR 111
           F  +  K  KTY ++EE   R ++FK N     +  L+ + T    +  F+DLT  EF+ 
Sbjct: 30  FDDWCQKHGKTYGSEEERQQRIQIFKDNHDFVTQHNLITNATYSLSLNAFADLTHHEFKA 89

Query: 112 QFLGLNRRLRLPADAQKAPILPTN-DLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGAL 170
             LGL+        A K   L  +  +P   DWR  GAVT VKDQG+CG+CWSFSATGA+
Sbjct: 90  SRLGLSVSAPSVIMASKGQSLGGSVKVPDSVDWRKKGAVTNVKDQGSCGACWSFSATGAM 149

Query: 171 EGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREK 230
           EG + + TG+L+SLSEQ+L+DCD         S ++GCNGGLM+ AFE+++K  G++ EK
Sbjct: 150 EGINQIVTGDLISLSEQELIDCDK--------SYNAGCNGGLMDYAFEFVIKNHGIDTEK 201

Query: 231 DYPYTGTDGGSCKFDKSK-IAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA------- 282
           DYPY   D G+CK DK K     + +++ + S++++     V   P++VGI         
Sbjct: 202 DYPYQERD-GTCKKDKLKQKVVTIDSYAGVKSNDEKALMEAVAAQPVSVGICGSERAFQL 260

Query: 283 ------VWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGEN 336
                 + MQ    G      C   LDH VLIVGYGS            YWI+KNSWG++
Sbjct: 261 YSSKFYLLMQGIFSGP-----CSTSLDHAVLIVGYGSQNGV-------DYWIVKNSWGKS 308

Query: 337 WGENGYYKICMGRN------VCGVDSMVSSVAAIH 365
           WG +G+    M RN      VCG++ + S     H
Sbjct: 309 WGMDGFMH--MQRNTENSDGVCGINMLASYPIKTH 341


>gi|340380717|ref|XP_003388868.1| PREDICTED: pro-cathepsin H-like [Amphimedon queenslandica]
          Length = 337

 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 129/367 (35%), Positives = 187/367 (50%), Gaps = 57/367 (15%)

Query: 8   SLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQ 67
           +L  LL S  +A   + +DD+ M                      F+++  K+ KTY+T 
Sbjct: 9   ALFFLLASFTVALPFSPSDDEVMAES-------------------FNMWMKKYEKTYSTM 49

Query: 68  EEHDYRFRVFKANLRRAKR-RQLLDPTAVHGVTKFSDLTPSEFRRQFL-------GLNRR 119
           EE++ R RV+ +N    ++  +   P   + + +FSDLT +EF++ +L         N  
Sbjct: 50  EEYNERLRVYTSNYYYIEQLNKEHGPHTEYELNQFSDLTFAEFKKIYLTEPQHCSATNGN 109

Query: 120 LRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTG 179
            + P +A+          P   DWR+   +T VKDQG CGSCW+FS TG LE  H + TG
Sbjct: 110 FQKPVNARD---------PVAVDWREKNVITPVKDQGKCGSCWTFSTTGCLEAHHAIKTG 160

Query: 180 ELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDG 239
           +L+SLSEQQLVDC    +       + GCNGGL + AFEYI   GG+E E +Y YT  D 
Sbjct: 161 QLISLSEQQLVDCAGAFN-------NHGCNGGLPSQAFEYIKYNGGIESESNYNYTAKD- 212

Query: 240 GSCKFDKSKIAAAVSNFSVISSD-EDQMAANLVKHGPLAVGINAVW-MQTYIGGVSCPYI 297
           G C+F+ S +AA VS+   I+ D E  +   +   GP+++        Q Y  GV    I
Sbjct: 213 GVCRFNSSLVAATVSDVVNITKDAEGDIGTAVANVGPVSIAFEVTKSFQHYKKGVYQGEI 272

Query: 298 --CGKYLD---HGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVC 352
             C +  D   H VL+VGY  +         + YWI+KNSW  +WG +GY+ I  G N C
Sbjct: 273 EVCSQSPDKVNHAVLVVGYNQTKLG------EEYWIVKNSWSASWGMDGYFWIRRGHNAC 326

Query: 353 GVDSMVS 359
           G+ +  S
Sbjct: 327 GLATCAS 333


>gi|33242880|gb|AAQ01144.1| cathepsin [Branchiostoma lanceolatum]
          Length = 334

 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 137/370 (37%), Positives = 191/370 (51%), Gaps = 59/370 (15%)

Query: 9   LLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQE 68
           +LLL+L +V++ A A          V+P + E            + ++K +  K Y T+ 
Sbjct: 1   MLLLILGAVISMATA---------GVLPHNKE------------WEMWKLQHGKQYETEA 39

Query: 69  EHDYRFRVFKANLRRAKRRQLLDPTAVHGVT----KFSDLTPSEFRRQFLGLNRRLRLPA 124
           E   R  +F+ N  +     +     +H  T    KF D+   EF ++ +G   ++    
Sbjct: 40  EEYSRRFIFEKNTVKIAEHNIRASLGMHSYTLAMNKFGDMHHEEFHQRIMGGCLKIV--- 96

Query: 125 DAQKAPILPT----ND----LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFL 176
              K P+L +    ND    LP   DWR+   V+ VKDQG CGSCW+FS TG+LEG H  
Sbjct: 97  ---KKPLLGSEVGDNDDNGTLPKSVDWRNSHMVSEVKDQGECGSCWAFSTTGSLEGQHSN 153

Query: 177 STGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTG 236
            TG+LV LSEQQLVDC  +         + GC GGLM+ AF+YI   GG++ E+ YPYT 
Sbjct: 154 KTGKLVDLSEQQLVDCSKDFG-------NQGCGGGLMDQAFQYIKANGGLDTEESYPYTA 206

Query: 237 TDGGSCKFDKSKIAAAVSNFS-VISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGV- 292
           TD   CKFD S + A +  +  V SS+E  +   +   GP++V I+A     Q Y  GV 
Sbjct: 207 TDDKPCKFDNSSVGATLIGYKDVKSSNEHALKRAVATVGPVSVAIDAGHESFQFYSSGVY 266

Query: 293 SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR--- 349
             P    + LDHGVL+VGYG    A      + +WI+KNSWG NWG+ GY  I M R   
Sbjct: 267 DEPQCSTEQLDHGVLVVGYG----AMNDNSHQAFWIVKNSWGPNWGDQGY--IMMSRNKN 320

Query: 350 NVCGVDSMVS 359
           N CG+ +  S
Sbjct: 321 NQCGIATSAS 330


>gi|1581745|prf||2117247A Cys protease:ISOTYPE=1
          Length = 467

 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 123/316 (38%), Positives = 162/316 (51%), Gaps = 24/316 (7%)

Query: 52  HFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRR 111
            F+ FK +  K Y +  E  +R  VFK NL  A+     +P A   VT FSDLT  EFR 
Sbjct: 37  QFAAFKQRHGKVYGSAAEEAFRLGVFKENLLFARLHAAANPHASFAVTPFSDLTREEFRS 96

Query: 112 QF---LGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATG 168
           ++          +          +     P   DWR  GAVT +KDQG C SCW+FS  G
Sbjct: 97  RYHNAAAHFAAAQKRVRVPVEVEVEVGGPPAAVDWRARGAVTAIKDQGNCSSCWAFSTIG 156

Query: 169 ALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA--GGV 226
            +EG   L+   L  LSEQ LV CD+          D+GC+GGLM+SAF++I++   G V
Sbjct: 157 NIEGQWHLAGNPLTGLSEQMLVSCDNA---------DNGCDGGLMDSAFDWIVEQNNGSV 207

Query: 227 EREKDYPYT--GTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW 284
             E  Y Y   G D  +C      + A +S    +  DED+MAA L  +GPLA+ ++A  
Sbjct: 208 YTEASYSYVSGGGDSQTCDMSDHVVGAVISGHVDLPQDEDKMAAWLAVNGPLAIAVDATS 267

Query: 285 MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYK 344
             +Y GGV    +  + LDHGV++VGY  S          PYWIIKNSWG +WGE GY +
Sbjct: 268 FMSYTGGVLTNCVSDQ-LDHGVVLVGYNDS-------SNPPYWIIKNSWGADWGEEGYIR 319

Query: 345 ICMGRNVCGVDSMVSS 360
           I  G N C V +   S
Sbjct: 320 IQKGTNQCLVKNYACS 335


>gi|27819101|gb|AAO23117.1| cysteine proteinase [Bombyx mori NPV]
          Length = 323

 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 116/325 (35%), Positives = 180/325 (55%), Gaps = 29/325 (8%)

Query: 47  LNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTP 106
           L A ++F  F  +F+K Y+++ E   RF++F+ NL     +   D +A + + KFSDL+ 
Sbjct: 22  LKAPNYFEEFVHRFNKNYSSEVEKLRRFKIFQHNLNEIINKNQND-SAKYEINKFSDLSK 80

Query: 107 SEFRRQFLGLNRRLRLPADAQ---KAPIL--PTNDLPTDFDWRDHGAVTGVKDQGACGSC 161
            E   ++ GL+    LP   Q   K  +L  P    P +FDWR    VT VK+QG CG+C
Sbjct: 81  DETIAKYTGLS----LPTQTQNFCKVILLDQPPGKGPLEFDWRRLNKVTSVKNQGMCGAC 136

Query: 162 WSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYIL 221
           W+F+  G+LE    +   EL++LSEQQ++ CD           D+GCNGGL+++AFE I+
Sbjct: 137 WAFATLGSLESQFAIKHNELINLSEQQMIGCDF---------VDAGCNGGLLHTAFEAII 187

Query: 222 KAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVGI 280
           K GGV+ E DYPY   D  +C+ + +K    V + +  I   E+++   L   GP+ + I
Sbjct: 188 KMGGVQLESDYPYEA-DNNNCRMNSNKFLVQVKDCYRYIIVYEEKLKDLLRLVGPIPMAI 246

Query: 281 NAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGEN 340
           +A  +  Y  G+   Y     L+H VL+VGYG            PYW  KN+WG +WGE+
Sbjct: 247 DAADIVNYKQGI-IKYCFDSGLNHAVLLVGYGVEN-------NIPYWTFKNTWGTDWGED 298

Query: 341 GYYKICMGRNVCGVDSMVSSVAAIH 365
           G++++    N CG+ + ++S A I+
Sbjct: 299 GFFRVQQNINACGMRNELASTAVIY 323


>gi|255538210|ref|XP_002510170.1| cysteine protease, putative [Ricinus communis]
 gi|223550871|gb|EEF52357.1| cysteine protease, putative [Ricinus communis]
          Length = 469

 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 114/288 (39%), Positives = 164/288 (56%), Gaps = 23/288 (7%)

Query: 69  EHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLN---RRLRLPAD 125
           E + RF+VFK NLR        + +   G+ +F+DLT  E+R  +LG     +R RL   
Sbjct: 70  EKERRFQVFKDNLRFIDEHNSENRSYKVGLNRFADLTNEEYRSMYLGARSGAKRNRLSRS 129

Query: 126 AQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLS 185
           + +      + LP   DWR  GAV  VKDQG+CGSCW+FS   A+EG + + TG+L+SLS
Sbjct: 130 SNRYLPRVGDSLPDSVDWRKEGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGDLISLS 189

Query: 186 EQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFD 245
           EQ+LVDCD         S + GCNGGLM+ AF++I+  GG++ E+DYPY   DG    + 
Sbjct: 190 EQELVDCDR--------SYNEGCNGGLMDYAFQFIINNGGIDSEEDYPYLARDGTCDTYR 241

Query: 246 KSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSCPYICGKYLD 303
           K+     + N+  +  ++++     V + P++V I A     Q Y  G+     CG  LD
Sbjct: 242 KNAKVVTIDNYEDVPVNDEKALQKAVANQPVSVAIEAGGREFQFYQSGIFTGR-CGTALD 300

Query: 304 HGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNV 351
           HGV  VGYG+          K YWI++NSWG++WGE+GY +  M RN+
Sbjct: 301 HGVAAVGYGTE-------NGKDYWIVRNSWGKSWGESGYIR--MERNI 339


>gi|146215984|gb|ABQ10194.1| actinidin Act2c [Actinidia arguta]
          Length = 378

 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 115/306 (37%), Positives = 167/306 (54%), Gaps = 26/306 (8%)

Query: 62  KTYATQEEHDYRFRVFKANLRRAKRRQL-LDPTAVHGVTKFSDLTPSEFRRQFLGLNRRL 120
           K+Y + +E + RF +FK NLR         + +   G+ +F+DLT  E+R  +LG     
Sbjct: 51  KSYNSLDEKEMRFEIFKDNLRIIDDHNADANRSFSLGLNRFADLTDEEYRSTYLGFKSGP 110

Query: 121 RLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGE 180
           +     +  P +  + LP   DWR  GAV GVK+QG C SCW+FSA  A+EG + + TG 
Sbjct: 111 KAKVSNRYVPKV-GDVLPNYVDWRTVGAVVGVKNQGLCSSCWAFSAVAAVEGINKIMTGN 169

Query: 181 LVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGG 240
           L+SLSEQ+LVDC              GCN G M  AF++I+  GG+  E +YPYT  DG 
Sbjct: 170 LLSLSEQELVDCGRT-------QSTRGCNRGYMTDAFQFIINNGGINTEDNYPYTAQDGQ 222

Query: 241 SCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYIC 298
             ++ +++    + ++  + S+ +    N V H P++VG+ +     + Y  G+   Y C
Sbjct: 223 CNRYLQNQKYVTIDDYENVPSNNEWALQNAVAHQPVSVGLESEGGKFKLYTSGIFTQY-C 281

Query: 299 GKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNV-----CG 353
           G  +DHGV IVGYG+        +   YWI+KNSWG NWGENGY +I   RN+     CG
Sbjct: 282 GTAIDHGVTIVGYGTE-------RGLDYWIVKNSWGTNWGENGYIRI--QRNIGGAGKCG 332

Query: 354 VDSMVS 359
           +  M S
Sbjct: 333 IARMAS 338


>gi|339244637|ref|XP_003378244.1| cathepsin F [Trichinella spiralis]
 gi|316972865|gb|EFV56511.1| cathepsin F [Trichinella spiralis]
          Length = 317

 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 112/287 (39%), Positives = 162/287 (56%), Gaps = 29/287 (10%)

Query: 93  TAVHGVTKFSDLTPSEFRRQFLG-LNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTG 151
           TA++G T F+D+T  EFR+ +L  L     LP   Q+  +L   D P  FDWR++  VT 
Sbjct: 10  TAIYGPTIFADMTQDEFRKTYLNMLETSALLPK--QRIALLKV-DRPNKFDWRNYNVVTK 66

Query: 152 VKDQ----------GACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEES 201
           VK Q          G CGS W+FS    +E A  +  G+L+SLSEQQ++DCD        
Sbjct: 67  VKRQVWHKMQKKFLGKCGSSWAFSTIANIESAWAIKFGDLISLSEQQIIDCD-------- 118

Query: 202 GSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISS 261
              + GC GG    A+  I++  GV+ E DYPYTG  G SCK +K KI   +++  ++  
Sbjct: 119 -KINRGCRGGQPLKAYHEIIRMSGVQAESDYPYTGLHG-SCKLNKEKIKVYINDTVLLHK 176

Query: 262 DEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICG---KYLDHGVLIVGYGSSGFAP 318
           +E  +A  L +HGP+AV +NA  +  Y  G+  P        +L+HG  I+GYG   +  
Sbjct: 177 NETTIANYLYEHGPVAVRMNADILMLYRKGIIKPTKSSCNPNFLNHGATIIGYGKESW-- 234

Query: 319 IRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIH 365
           + +   PYWIIKNSWG +WGENGY+++  G   CGV+ MV+S++ + 
Sbjct: 235 LHWWSNPYWIIKNSWGVDWGENGYFRLYRGNEACGVNRMVTSMSEMQ 281


>gi|218181|dbj|BAA14402.1| oryzain alpha precursor [Oryza sativa Japonica Group]
          Length = 458

 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 120/324 (37%), Positives = 176/324 (54%), Gaps = 28/324 (8%)

Query: 35  VPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTA 94
           + S GE+SE+    A   ++ +K++  K+Y    E + R+  F+ NLR            
Sbjct: 25  IVSYGERSEEE---ARRLYAEWKAEHGKSYNAVGEEERRYAAFRDNLRYIDEHNAAADAG 81

Query: 95  VH----GVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTND-LPTDFDWRDHGAV 149
           VH    G+ +F+DLT  E+R  +LGL  + R         +   N+ LP   DWR  GAV
Sbjct: 82  VHSFRLGLNRFADLTNEEYRDTYLGLRNKPRRERKVSDRYLAADNEALPESVDWRTKGAV 141

Query: 150 TGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCN 209
             +KDQG CGSCW+FSA  A+E  + + TG+L+SLSEQ+LVDCD         S + GCN
Sbjct: 142 AEIKDQGGCGSCWAFSAIAAVEDINQIVTGDLISLSEQELVDCDT--------SYNEGCN 193

Query: 210 GGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAAN 269
           GGLM+ AF++I+  GG++ E DYPY G D       K+     + ++  ++ + +     
Sbjct: 194 GGLMDYAFDFIINNGGIDTEDDYPYKGKDERCDVNRKNAKVVTIDSYEDVTPNSETSLQK 253

Query: 270 LVKHGPLAVGINA--VWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYW 327
            V++ P++V I A     Q Y  G+     CG  LDHGV  VGYG+          K YW
Sbjct: 254 AVRNQPVSVAIEAGGRAFQLYSSGIFTG-KCGTALDHGVAAVGYGTE-------NGKDYW 305

Query: 328 IIKNSWGENWGENGYYKICMGRNV 351
           I++NSWG++WGE+GY +  M RN+
Sbjct: 306 IVRNSWGKSWGESGYVR--MERNI 327


>gi|388509526|gb|AFK42829.1| unknown [Lotus japonicus]
          Length = 333

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 125/321 (38%), Positives = 175/321 (54%), Gaps = 31/321 (9%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH----GVTKFSDLT 105
           + H++LFK+ F K Y+T EE   R   ++AN+   ++  L     +H    G+  ++DLT
Sbjct: 25  DSHWALFKTTFGKQYSTAEEITRRL-AWEANVAIIRQHNLEHDLGLHTYTLGLNNYADLT 83

Query: 106 PSEFRRQFLGLNRRLRLPADA-QKAPILPTN-DLPTDFDWRDHGAVTGVKDQGACGSCWS 163
            +EF +   GL         A ++  + P   +LPT  DWR  G VT +KDQG CGSCW+
Sbjct: 84  NAEFNQVMNGLRVNASQTKSANRRTYVAPVGVELPTSVDWRTKGYVTPIKDQGQCGSCWA 143

Query: 164 FSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA 223
           FS+TG+LEG HF  TG+LVSLSEQ L DC  +         + GCNGGLM+ AF YI + 
Sbjct: 144 FSSTGSLEGQHFAKTGQLVSLSEQNLTDCSQK-------QGNMGCNGGLMDQAFTYIKEN 196

Query: 224 GGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVIS-SDEDQMAANLVKHGPLAVGINA 282
            G++ E  YPY   D   C F  + + A  + ++ I+  DE+ + + +   GP++V I+A
Sbjct: 197 NGIDTESSYPYKAVD-EKCHFKAADVGATDTGYTDIAQQDENALQSAIATVGPISVAIDA 255

Query: 283 VW--MQTYIGGVSCPYIC-GKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGE 339
                Q Y  G      C    LDHGVL VGY S          K Y+I+KNSWG +WG+
Sbjct: 256 SHSSFQLYRSGAYNERACSATQLDHGVLAVGYDSE-------DGKDYYIVKNSWGTSWGQ 308

Query: 340 NGYYKICMGR---NVCGVDSM 357
            GY  I M R   N CG+ +M
Sbjct: 309 KGY--IWMTRNKNNQCGIATM 327


>gi|195381187|ref|XP_002049336.1| GJ20806 [Drosophila virilis]
 gi|194144133|gb|EDW60529.1| GJ20806 [Drosophila virilis]
          Length = 339

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 128/323 (39%), Positives = 173/323 (53%), Gaps = 30/323 (9%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRR-AKRRQLLDPTAVH---GVTKFSDLTPSE 108
           +  FK +  K Y  + E  +R ++F  N  + AK  Q      V     V K++D+   E
Sbjct: 27  WQTFKLEHRKNYVDETEERFRLKIFNENKHKIAKHNQRYASGEVSFKMAVNKYADMLHHE 86

Query: 109 FRRQFLGLN----RRLRL--PADAQKAPILPTN-DLPTDFDWRDHGAVTGVKDQGACGSC 161
           F     G N    ++LR   P+      I P +  +P   DWR  GAVT VKDQG CGSC
Sbjct: 87  FHTTMNGFNYTLHKQLRASDPSFVGVTFISPEHVKIPKSVDWRSKGAVTEVKDQGHCGSC 146

Query: 162 WSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYIL 221
           W+FS+TGALEG HF   G L+SLSEQ LVDC        +   ++GCNGGLM++AF YI 
Sbjct: 147 WAFSSTGALEGQHFRKAGTLISLSEQNLVDC-------STKYGNNGCNGGLMDNAFRYIK 199

Query: 222 KAGGVEREKDYPYTGTDGGSCKFDKSKIAAA-VSNFSVISSDEDQMAANLVKHGPLAVGI 280
             GG++ EK YPY G D  SC F+K+ I A    +  +   DE +MA  +   GP++V I
Sbjct: 200 DNGGIDTEKSYPYEGID-DSCHFNKATIGATDRGSVDIPQGDEKKMAEAVATIGPVSVAI 258

Query: 281 NAVW--MQTYIGGVSCPYICG-KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENW 337
           +A     Q Y  G+     C  + LDHGVL+VGYG+          + YW++KNSWG  W
Sbjct: 259 DASHESFQFYSEGIYNEPQCDPQNLDHGVLVVGYGTDESG------QDYWLVKNSWGTTW 312

Query: 338 GENGYYKICM-GRNVCGVDSMVS 359
           G+ G+ K+     N CG+ S  S
Sbjct: 313 GDKGFIKMARNADNQCGIASASS 335


>gi|90592736|ref|YP_529689.1| VCATH [Agrotis segetum nucleopolyhedrovirus]
 gi|71559186|gb|AAZ38185.1| VCATH [Agrotis segetum nucleopolyhedrovirus]
          Length = 343

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 116/362 (32%), Positives = 202/362 (55%), Gaps = 28/362 (7%)

Query: 8   SLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQ 67
           +L++LL+ + L +      D+ ++     +  + S  ++ +A  +F  F S+++K Y  +
Sbjct: 4   TLIILLVVNALLNW----RDNELVDAAGTAANKPSLYNINSAPQYFEQFISQYNKQYKNE 59

Query: 68  EEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQ 127
            E  +RF +F  N+    ++   + +AV+ + +F+D+T +E   +  GL     L ++  
Sbjct: 60  AEKRHRFNIFMHNIEEINQKNSRNDSAVYKINRFADMTKNEVVIRHTGLASIGELNSNFC 119

Query: 128 KAPILP---TNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSL 184
           +  ++        P+ FDWR +  VT VKDQ  CG+CW+F++ GALE  + +    L+ L
Sbjct: 120 ETVVVDGPGQRQRPSSFDWRTYNKVTSVKDQSMCGACWAFASLGALESQYAIKYDRLIDL 179

Query: 185 SEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKF 244
           +EQQLVDCD           D GC+GGL+++A+E I++ GGVE+E DYPY   +   C  
Sbjct: 180 AEQQLVDCDF---------VDMGCDGGLIHTAYEQIMQMGGVEQEFDYPYRA-ERQPCAL 229

Query: 245 DKSKIAAAVSN-FSVISSDEDQMAANLVKH-GPLAVGINAVWMQTYIGGVSCPYICGKYL 302
              K AA V   F  +  +E+++  +L++H GP+A+ ++AV +  Y GG+   +     L
Sbjct: 230 KPHKFAAGVRKCFRYVLRNEERL-EDLLRHVGPIAIAVDAVDLTDYYGGI-VSFCENNGL 287

Query: 303 DHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVA 362
           +H VL+VGYG            P+W +KNSWG ++GE+GY ++  G N CG+ + ++S A
Sbjct: 288 NHAVLLVGYGVE-------NNVPFWTLKNSWGSDYGEDGYVRVRRGVNSCGLVNELASSA 340

Query: 363 AI 364
            +
Sbjct: 341 QV 342


>gi|84660246|emb|CAI43320.1| cathepsin L [Lubomirskia baicalensis]
 gi|85677150|emb|CAI46307.1| cathepsin L [Lubomirskia baicalensis]
          Length = 327

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 127/321 (39%), Positives = 168/321 (52%), Gaps = 41/321 (12%)

Query: 56  FKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH--------GVTKFSDLTPS 107
           +K +  K Y +  E   R  +++AN      R+ +D    H        G+ +F+DL  S
Sbjct: 25  WKKEHGKVYNSDREELTRHIIWQAN------RKYVDEHNAHAEKFGFTVGMNQFADLESS 78

Query: 108 EFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSAT 167
           EF R + G N +  +     K       DLPT  DWR  G VT +K+QG CGSCW+FSA 
Sbjct: 79  EFGRLYNGYNNKPSMKKAQSKVFSTKVGDLPTSVDWRTKGFVTAIKNQGQCGSCWAFSAV 138

Query: 168 GALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVE 227
             LEG HF +TG LVSLSEQ LVDC        +   + GCNGGLM++AF+Y++K GG++
Sbjct: 139 AGLEGQHFNATGTLVSLSEQNLVDCS-------TAEGNQGCNGGLMDNAFQYVIKNGGID 191

Query: 228 REKDYPYTGTDGGSCKFDKSKIAAAVSNFSVI--SSDEDQMAANLVKHGPLAVGINA--V 283
            E  YPY   D   CKF+ + + +  S FS I     E  +   +   GP++V I+A   
Sbjct: 192 TEASYPYKAVD-QKCKFNAANVGSTCSGFSDILPHKSEAALQVAVAVVGPISVAIDASHT 250

Query: 284 WMQTYIGGVSCPYICGKY-LDHGVLIVGY-GSSGFAPIRFKEKPYWIIKNSWGENWGENG 341
             Q Y  GV     C +  LDHGV  VGY  SSG A        YWI+KNSWG  WG+ G
Sbjct: 251 SFQLYKSGVYSESACSQTSLDHGVTAVGYDSSSGVA--------YWIVKNSWGTTWGQAG 302

Query: 342 YYKICMGR---NVCGVDSMVS 359
           Y  I M R   N CG+ +  S
Sbjct: 303 Y--IWMSRNKNNQCGIATAAS 321


>gi|224116880|ref|XP_002317417.1| predicted protein [Populus trichocarpa]
 gi|118488173|gb|ABK95906.1| unknown [Populus trichocarpa]
 gi|222860482|gb|EEE98029.1| predicted protein [Populus trichocarpa]
          Length = 498

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 118/302 (39%), Positives = 168/302 (55%), Gaps = 27/302 (8%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLR-----RAKRRQLLDPTAVHGVTKFSDLTPS 107
           F L+K K  K Y   EE + R   FK NL+       KR+  L+     G+ KF+DL+  
Sbjct: 50  FKLWKEKHQKVYKHAEEAERRIGNFKRNLKYIIEKNGKRKSGLEHKV--GLNKFADLSNE 107

Query: 108 EFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSAT 167
           EFR  +L   ++     + +K   L T D P+  DWR+ G VT VKDQG CGSCWSFS T
Sbjct: 108 EFREMYLSKVKKPITIEEKRKHRHLQTCDAPSSLDWRNKGVVTAVKDQGDCGSCWSFSTT 167

Query: 168 GALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVE 227
           GA+E  + + TG+L+SLSEQ+LVDCD         + + GC GG M+SAF++++  GG++
Sbjct: 168 GAIEAINAIVTGDLISLSEQELVDCDT--------TNNYGCEGGDMDSAFQWVIGNGGID 219

Query: 228 REKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGIN--AVWM 285
            E DYPYTG DG      + K   ++  +  +   +  +    V+  P++VG++  A+  
Sbjct: 220 TEADYPYTGVDGTCNTAKEEKKVVSIEGYVDVDPSDSALLCATVQQ-PISVGMDGSALDF 278

Query: 286 QTYIGGVSCPYICG--KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYY 343
           Q Y GG+      G    +DH +LIVGYGS         ++ YWI+KNSWG  WG  GY+
Sbjct: 279 QLYTGGIYDGDCSGDPNDIDHAILIVGYGSE-------NDEDYWIVKNSWGTEWGMEGYF 331

Query: 344 KI 345
            I
Sbjct: 332 YI 333


>gi|309380130|gb|ADO65978.1| cathepsin L [Eriocheir sinensis]
 gi|309380134|gb|ADO65980.1| cathepsin L [Eriocheir sinensis]
          Length = 325

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 122/319 (38%), Positives = 173/319 (54%), Gaps = 27/319 (8%)

Query: 51  HHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVT----KFSDLTP 106
           + +  FK+++ K Y + +E  YR  V++ N              +   T    +F D+T 
Sbjct: 20  NEWQQFKARYGKQYRSTKEDSYRQSVYEQNQEFINSHNEQYENGLVSFTLAMNQFGDMTT 79

Query: 107 SEFRRQFLG-LNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFS 165
            E      G L+   ++P      P++  ++LP   DWRD GAVT VKDQ ACGSCW+FS
Sbjct: 80  EEINAAMNGFLSAGKKVPRGTMYQPLV--DELPDTVDWRDKGAVTPVKDQKACGSCWAFS 137

Query: 166 ATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGG 225
           ATG+LEG HFLSTG+LVSLSEQ LVDC  +         + GC GGLM++AF YI    G
Sbjct: 138 ATGSLEGQHFLSTGKLVSLSEQNLVDCSDKYG-------NFGCGGGLMDNAFRYIKDNNG 190

Query: 226 VEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVIS-SDEDQMAANLVKHGPLAVGINA-- 282
           ++ E+ YPY   + G C+F+   + A +S++  I    ED +   + + GP++V I+A  
Sbjct: 191 IDTEESYPYEAKN-GPCRFNSDNVGATLSSYVDIQHGSEDDLQKAVAEKGPVSVAIDAST 249

Query: 283 VWMQTYIGGVSCPYIC-GKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENG 341
                Y  G+     C   +LDHGVL VGYG+            YW++KNSW E WG++G
Sbjct: 250 STFHFYSRGIYYDEKCSSSFLDHGVLAVGYGTD-------DSSDYWLVKNSWNETWGDSG 302

Query: 342 YYKICMGR-NVCGVDSMVS 359
           Y K+   R N CG+ S  S
Sbjct: 303 YIKMSRNRNNNCGIASQAS 321


>gi|269784818|ref|NP_001161481.1| cathepsin L1 precursor [Gallus gallus]
          Length = 353

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 128/318 (40%), Positives = 171/318 (53%), Gaps = 21/318 (6%)

Query: 52  HFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH----GVTKFSDLTPS 107
           H+ L+KS  SK Y  +EE  +R  V++ NL+  +   L      H    G+ +F D+T  
Sbjct: 43  HWQLWKSWHSKDYHEREE-SWRRVVWEKNLKMIELHNLDHSLGKHSYKLGMNQFGDMTAE 101

Query: 108 EFRRQFLGLNRRLRLPADAQKAPILPTN-DLPTDFDWRDHGAVTGVKDQGACGSCWSFSA 166
           EFR+   G   +           + P+  + P   DWR+ G VT VKDQG CGSCW+FS 
Sbjct: 102 EFRQLMNGYKHKKSERKYRGSQFLEPSFLEAPRSVDWREKGYVTPVKDQGQCGSCWAFST 161

Query: 167 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGV 226
           TGALEG HF  TG+LVSLSEQ LVDC     PE     + GCNGGLM+ AF+Y+   GG+
Sbjct: 162 TGALEGQHFRKTGKLVSLSEQNLVDCSR---PE----GNQGCNGGLMDQAFQYVQDNGGI 214

Query: 227 EREKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVGINA--V 283
           + E+ YPYT  D   C++     AA  + F  +    E  +   +   GP++V I+A   
Sbjct: 215 DSEESYPYTAKDDEDCRYKAEYNAANDTGFVDIPQGHERALMKAVASVGPVSVAIDAGHS 274

Query: 284 WMQTYIGGVSC-PYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGY 342
             Q Y  G+   P    + LDHGVL+VGY   GF       K YWI+KNSWGE WG+ GY
Sbjct: 275 SFQFYQSGIYYEPDCSSEDLDHGVLVVGY---GFEGEDVDGKKYWIVKNSWGEKWGDKGY 331

Query: 343 YKICMGR-NVCGVDSMVS 359
             +   R N CG+ +  S
Sbjct: 332 IYMAKDRKNHCGIATAAS 349


>gi|15320768|ref|NP_203280.1| V-CATH [Epiphyas postvittana NPV]
 gi|37077652|sp|Q91GE3.1|CATV_NPVEP RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|15213236|gb|AAK85675.1| V-CATH [Epiphyas postvittana NPV]
          Length = 323

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 117/326 (35%), Positives = 180/326 (55%), Gaps = 29/326 (8%)

Query: 46  LLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLT 105
           +L A ++F  F  +++K Y ++ E   R+++F+ NL     +   D TAV+ + KFSDL+
Sbjct: 21  ILKAPNYFEEFVRQYNKQYDSEYEKLRRYKIFQHNLNDIITKNRND-TAVYKINKFSDLS 79

Query: 106 PSEFRRQFLGLNRRLRLPADAQ---KAPIL--PTNDLPTDFDWRDHGAVTGVKDQGACGS 160
             E   ++ GL+    LP   Q   +  +L  P    P +FDWR    +T VK+QG CG+
Sbjct: 80  KDETIAKYTGLS----LPLHTQNFCEVVVLDRPPGKGPLEFDWRRFNKITSVKNQGMCGA 135

Query: 161 CWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYI 220
           CW+F+   +LE    ++   L++LSEQQ++DCD         S D GC GGL+++AFE I
Sbjct: 136 CWAFATLASLESQFAIAHDRLINLSEQQMIDCD---------SVDVGCEGGLLHTAFEAI 186

Query: 221 LKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFS-VISSDEDQMAANLVKHGPLAVG 279
           +  GGV+ E DYPY  ++   C+ D +K    V   +  I+  E+++   L   GP+ V 
Sbjct: 187 ISMGGVQIENDYPYESSN-NYCRMDPTKFVVGVKQCNRYITIYEEKLKDVLRLAGPIPVA 245

Query: 280 INAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGE 339
           I+A  +  Y  G+   Y     L+H VL+VGYG            PYWI+KNSWG +WGE
Sbjct: 246 IDASDILNYEQGI-IKYCANNGLNHAVLLVGYGVEN-------NVPYWILKNSWGTDWGE 297

Query: 340 NGYYKICMGRNVCGVDSMVSSVAAIH 365
            G++KI    N CG+ + ++S A I+
Sbjct: 298 QGFFKIQQNVNACGIKNELASTAEIN 323


>gi|118197532|ref|YP_874244.1| cathepsin [Ectropis obliqua NPV]
 gi|113472527|gb|ABI35734.1| cathepsin [Ectropis obliqua NPV]
          Length = 299

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 109/316 (34%), Positives = 176/316 (55%), Gaps = 23/316 (7%)

Query: 55  LFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFL 114
           +F + ++K Y    E   R+ +F+ NLR    +  L+ +AV+ + KFSDL+ SE   ++ 
Sbjct: 1   MFVANYNKMYDDDLEKTKRYSIFRDNLRDINIKNKLNGSAVYRINKFSDLSTSEIVLKYT 60

Query: 115 GLN--RRLRLPADAQKAPIL--PTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGAL 170
           GL+     RL  +  K  +L  P    P +FDWR    VT +K+QG CG+CW+F+   ++
Sbjct: 61  GLSVPPTERLTTNFCKTIVLDQPPGKGPLNFDWRHQNKVTSIKNQGVCGACWAFATLASI 120

Query: 171 EGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREK 230
           E  + +     ++LSEQQ++DCD+          D GC+GGL+++AFE +++ GGV+ E 
Sbjct: 121 ESQYAIKHNVQINLSEQQMIDCDY---------VDMGCDGGLLHTAFEQMIEMGGVKHEH 171

Query: 231 DYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVGINAVWMQTYI 289
           +YPY G +  +C+ +    A  +   +  I   E+++   L   GP+ + I+A  +  Y 
Sbjct: 172 EYPYEGIN-MNCRLNDDNFAVKIIGCYRYIVLQEEKLKDLLRAVGPIPIAIDASGIANYY 230

Query: 290 GGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR 349
            GV   Y     L+H VL+VGYG            PYW IKN+WGE+WGENGY+++    
Sbjct: 231 QGV-INYCENHGLNHAVLLVGYGVE-------NNIPYWTIKNTWGEDWGENGYFRVRQNI 282

Query: 350 NVCGVDSMVSSVAAIH 365
           N CG+ + ++S A +H
Sbjct: 283 NACGMTNELASSAVLH 298


>gi|595986|gb|AAA79915.1| cysteine proteinase, partial [Dianthus caryophyllus]
          Length = 427

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 118/309 (38%), Positives = 170/309 (55%), Gaps = 25/309 (8%)

Query: 51  HHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH-----GVTKFSDLT 105
           +H   +  K  K Y    E + RF +F+ NL    +    +          G+ KF+DLT
Sbjct: 3   YHLQSWLVKHRKNYNALGEKEKRFAIFRDNLEFIDQHNNNNNGGGGGEFELGLNKFADLT 62

Query: 106 PSEFRRQFLGLNRRLRLPA-DAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSF 164
             EFRR + G+ R  +  +  + +  +   ++LP   DWR  GAV+ VKDQG CGSCW+F
Sbjct: 63  NDEFRRIYFGVKRPEKAESVKSDRYAVKEGDELPESVDWRKKGAVSHVKDQGQCGSCWAF 122

Query: 165 SATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAG 224
           SA GA+EG + + TG+L++LSEQ+LVDCD         S +SGC+GGLM+ AF +I+  G
Sbjct: 123 SAIGAVEGINKIVTGDLITLSEQELVDCDT--------SYNSGCDGGLMDYAFRFIINNG 174

Query: 225 GVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW 284
           G++ +KDYPY  TDG      K+     +     + ++ ++     V H P+ + I A  
Sbjct: 175 GIDTDKDYPYKATDGSCDSNRKNAKVVTIDGLEDVPANNEKALQKAVAHQPVRLAIEAGG 234

Query: 285 --MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGY 342
              Q Y  GV     CG  LDHGV+ VGYG++         K YWI++NSWG++WGE+GY
Sbjct: 235 RDFQLYKSGVFTG-SCGTSLDHGVVAVGYGTTDDG------KDYWIVRNSWGDDWGEDGY 287

Query: 343 YKICMGRNV 351
             I M RN 
Sbjct: 288 --IRMERNT 294


>gi|198432217|ref|XP_002130230.1| PREDICTED: similar to cathepsin L [Ciona intestinalis]
          Length = 327

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 129/314 (41%), Positives = 169/314 (53%), Gaps = 26/314 (8%)

Query: 56  FKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH----GVTKFSDLTPSEFRR 111
           +K+   K+YA+ EE   R  +++ NLR   +        +H     +TKF+DL   EF  
Sbjct: 26  WKNTHGKSYASHEELK-RQLIWEKNLRVVTQHNYEYDEGLHTYTMAMTKFADLENDEFAA 84

Query: 112 QFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALE 171
            +L   R+          P+    + PT  DWR  G VT VK+Q  CGSCW+FS TG+LE
Sbjct: 85  MYLPRMRKDSRNGFCSAQPVGGFVENPTSIDWRTRGYVTPVKNQLQCGSCWAFSTTGSLE 144

Query: 172 GAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKD 231
           G HF  T  LVSLSEQQL+DC  +         D GC GG+M+ AF+YI  AGGVE E D
Sbjct: 145 GQHFAKTKNLVSLSEQQLMDCSFK-------EGDEGCGGGIMDYAFDYIFLAGGVESEAD 197

Query: 232 YPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVGINA--VWMQTY 288
           YPY   +   C+FD S IAA ++    V S  E Q+   +   GP++V I+A  +  Q Y
Sbjct: 198 YPYEARN-DHCRFDNSSIAATLTGCVDVTSGSETQLEKAVGSIGPVSVAIDASHISFQLY 256

Query: 289 IGGVSCPYICG-KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGE-NGYYKIC 346
             GV+   +C    LDHGVL VGYG+            YWI+KNSWGE WG  NGY K+ 
Sbjct: 257 GSGVNYEPMCSTTTLDHGVLAVGYGAD-------NGNEYWIVKNSWGEGWGHLNGYIKMS 309

Query: 347 MGR-NVCGVDSMVS 359
             R N CG+ +  S
Sbjct: 310 KNRNNNCGIATQAS 323


>gi|74222595|dbj|BAE38161.1| unnamed protein product [Mus musculus]
          Length = 334

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 126/324 (38%), Positives = 173/324 (53%), Gaps = 24/324 (7%)

Query: 44  DHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHG----VT 99
           D   +AE H   +KS   + Y T EE ++R  +++ N+R  +          HG    + 
Sbjct: 22  DQTFSAEWH--QWKSTHRRLYGTNEE-EWRRAIWEKNMRMIQLHNGEYSNGQHGFSMEMN 78

Query: 100 KFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACG 159
            F D+T  EFR+   G   +        + P++    +P   DWR+ G VT VK+QG CG
Sbjct: 79  AFGDMTNEEFRQVVNGYRHQKHKKGRLFQEPLMLK--IPKSVDWREKGCVTPVKNQGQCG 136

Query: 160 SCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEY 219
           SCW+FSA+G LEG  FL TG+L+SLSEQ LVDC H          + GCNGGLM+ AF+Y
Sbjct: 137 SCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSH-------AQGNQGCNGGLMDFAFQY 189

Query: 220 ILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVG 279
           I + GG++ E+ YPY   D GSCK+      A  + F  I   E  +   +   GP++V 
Sbjct: 190 IKENGGLDSEESYPYEAKD-GSCKYRAEFAVANDTGFVDIPQQEKALMKAVATVGPISVA 248

Query: 280 INAVW--MQTYIGGVSC-PYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGEN 336
           ++A    +Q Y  G+   P    K LDHGVL+VGYG  G    + K   YW++KNSWG  
Sbjct: 249 MDASHPSLQFYSLGIYYEPNCSSKNLDHGVLLVGYGYEGTDSNKNK---YWLVKNSWGSE 305

Query: 337 WGENGYYKICMGR-NVCGVDSMVS 359
           WG  GY KI   R N CG+ +  S
Sbjct: 306 WGMEGYIKIAKDRDNHCGLATAAS 329


>gi|116563690|gb|ABJ99858.1| cathepsin L [Hippoglossus hippoglossus]
          Length = 336

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 138/362 (38%), Positives = 187/362 (51%), Gaps = 42/362 (11%)

Query: 9   LLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQE 68
           L LL+L++ L+S ++    DA + +                  H+ L+KS  SK Y  +E
Sbjct: 2   LPLLVLTACLSSVLSAPVLDAQLNE------------------HWDLWKSWHSKKYHEKE 43

Query: 69  EHDYRFRVFKANLRRAKRRQLLDPTAVH----GVTKFSDLTPSEFRRQFLG--LNRRLRL 122
           E  +R  V++ NL++ +   L      H    G+  F D+T  EFR+   G  L  + + 
Sbjct: 44  E-GWRRMVWEKNLQKIELHNLEHSMGTHSFRLGMNHFGDMTHEEFRQIMNGYKLKTQRKF 102

Query: 123 PADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELV 182
                  P   T   P+  DWR+ G VT VKDQG CGSCW+FS TGALEG  F  TG+LV
Sbjct: 103 TGSLFMEPNFMT--APSAVDWREKGYVTPVKDQGQCGSCWAFSTTGALEGQQFRKTGKLV 160

Query: 183 SLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSC 242
           SLSEQ LVDC     PE     + GC GGLM+ AF+Y+    G++ E  YPYTGTD   C
Sbjct: 161 SLSEQNLVDCSR---PE----GNEGCGGGLMDQAFQYVTDNQGLDSEDSYPYTGTDDQPC 213

Query: 243 KFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSCPYIC- 298
            +D    +A  + F  V S  E  +   +   GP++V I+A     Q Y  G+     C 
Sbjct: 214 HYDPLYNSANDTGFVDVPSGKEHALMKAVASVGPVSVAIDAGHESFQFYQSGIYYEKECS 273

Query: 299 GKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSM 357
            + LDHGVL VGYG  G   +    K +WI+KNSWGE WG+ GY  +   R N CG+ + 
Sbjct: 274 SEELDHGVLAVGYGFEGEDKMG---KKFWIVKNSWGEKWGDKGYIYMAKDRKNHCGIATA 330

Query: 358 VS 359
            S
Sbjct: 331 AS 332


>gi|5081735|gb|AAD39513.1|AF147207_1 cathepsin L-like protease precursor [Artemia franciscana]
          Length = 338

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 128/327 (39%), Positives = 175/327 (53%), Gaps = 29/327 (8%)

Query: 45  HLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLL----DPTAVHGVTK 100
           +LL  E H  LFK+   K Y +Q E  +R +++  N  +  +  +L    + +    + K
Sbjct: 25  NLLADEWH--LFKATHKKEYPSQLEEKFRMKIYLENKHKVAKHNILYEKGEKSYQVAMNK 82

Query: 101 FSDLTPSEFRRQFLGLNRRLRLPADAQKAPIL--PTN-DLPTDFDWRDHGAVTGVKDQGA 157
           F DL   EFR    G   + +  + A+       P N ++P   DWR  GA+T VKDQG 
Sbjct: 83  FGDLLHHEFRSIMNGYQHKKQNSSRAESTFTFMEPANVEVPESVDWRVKGAITPVKDQGQ 142

Query: 158 CGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAF 217
           CGSCW+FS+TGALEG  F  TG+L+SLSEQ L+DC  +   E       GCNGGLM+ AF
Sbjct: 143 CGSCWAFSSTGALEGQTFRKTGKLISLSEQNLIDCSGKYGNE-------GCNGGLMDQAF 195

Query: 218 EYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVI-SSDEDQMAANLVKHGPL 276
           +YI    G++ E  YPY   D   C+++     A    F  I S +ED++ A +   GP+
Sbjct: 196 QYIKDNKGIDTENTYPYEAED-NVCRYNPRNRGAIDRGFVHIPSGEEDKLKAAVATVGPV 254

Query: 277 AVGINAVW--MQTYIGGVSCPYIC-GKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSW 333
           +V I+A     Q Y  GV     C    LDHGVL+VGYGS          K YW++KNSW
Sbjct: 255 SVAIDASHESFQFYSKGVYYEPSCDSDDLDHGVLVVGYGSDN-------GKDYWLVKNSW 307

Query: 334 GENWGENGYYKICMGR-NVCGVDSMVS 359
            E+WG+ GY KI   R N CG+ +  S
Sbjct: 308 SEHWGDEGYIKIARNRKNHCGIATAAS 334


>gi|47224192|emb|CAG13112.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 327

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 127/313 (40%), Positives = 171/313 (54%), Gaps = 27/313 (8%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEF 109
           E HF  + +  +K Y+ QE H  R ++F  N RR ++    + +   G+ +FSD+T +EF
Sbjct: 26  EQHFKSWMALHNKAYSVQEFHQ-RLQIFTENKRRIEKHNGGNHSFTMGLNQFSDMTFAEF 84

Query: 110 RRQFLGLNRRLRLPADAQKAPILPTND-LPTDFDWRDHGA-VTGVKDQGACGSCWSFSAT 167
           R++FL    +      A K   + TN   P   DWR  G  VT VK+QGACGSCW+FS T
Sbjct: 85  RKRFLWSEPQ---NCSATKGSYMKTNSPQPESIDWRTKGNYVTPVKNQGACGSCWTFSTT 141

Query: 168 GALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVE 227
           G LE    ++TG+LV LSEQQLVDC  + +       + GCNGGL + AFEYI    G+ 
Sbjct: 142 GCLESVTAINTGKLVPLSEQQLVDCAWDFN-------NHGCNGGLPSQAFEYIKYNKGLM 194

Query: 228 REKDYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVGINAV--W 284
            E  YPYT  + G CK+     AA V N  ++ + DE  M   +  H P++        +
Sbjct: 195 TESGYPYTAFE-GKCKYKPELAAAFVKNVVNITAYDEKGMEDAVATHNPVSFAFEVTDDF 253

Query: 285 MQTYIGGVSCPYICGKYLD---HGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENG 341
           M  Y GGV     C K  D   H VL VGYG++          PYWI+KNSWG  WGENG
Sbjct: 254 MH-YKGGVYSSSRCHKTTDKVNHAVLAVGYGNNN------SSVPYWIVKNSWGPYWGENG 306

Query: 342 YYKICMGRNVCGV 354
           Y+ I  G+N+CG+
Sbjct: 307 YFLIERGKNMCGL 319


>gi|426219875|ref|XP_004004143.1| PREDICTED: cathepsin L1 [Ovis aries]
          Length = 333

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 125/324 (38%), Positives = 177/324 (54%), Gaps = 24/324 (7%)

Query: 44  DHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH----GVT 99
           DH LN +  + L+K+   K Y   EE  +R  V+K N++  +          H     + 
Sbjct: 22  DHSLNTQ--WELWKAVHRKPYDLNEE-GWRKAVWKKNMKMIELHNQEYSQGKHSFSMAMN 78

Query: 100 KFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACG 159
            F DLT  EFR+   G  R+           I  +  +P   DWR+ G VT VK+QG CG
Sbjct: 79  AFGDLTSEEFRQMMNGFQRQENKKGKVFHETIFAS--IPPSVDWREKGYVTPVKNQGKCG 136

Query: 160 SCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEY 219
           SCW+FS TGALEG  F  TG+LVSLSEQ LVDC     PE     + GC+GGLM++AF+Y
Sbjct: 137 SCWAFSTTGALEGQMFRKTGKLVSLSEQNLVDCSQ---PE----GNRGCHGGLMDNAFQY 189

Query: 220 ILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVG 279
           +L  GG++ E+ YPYTG   G+C ++    AA  + F  +   E+ +   +   GP++V 
Sbjct: 190 VLDVGGLDSEESYPYTGLV-GTCNYNPKNSAANETGFVDLPKQENALMKAVATLGPISVA 248

Query: 280 INAV--WMQTYIGGVSCPYIC-GKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGEN 336
           ++A     Q Y  G+     C  + +DHGVL+VGY   GF      +  YW++KNSWG++
Sbjct: 249 VDASNPSFQFYKSGIYYEPKCKSESVDHGVLVVGY---GFEGADSDDNKYWLVKNSWGKH 305

Query: 337 WGENGYYKICMGRNV-CGVDSMVS 359
           WG NGY K+   +N  CG+ +M S
Sbjct: 306 WGINGYIKMAKDQNNHCGIATMAS 329


>gi|330805275|ref|XP_003290610.1| hypothetical protein DICPUDRAFT_98747 [Dictyostelium purpureum]
 gi|325079249|gb|EGC32858.1| hypothetical protein DICPUDRAFT_98747 [Dictyostelium purpureum]
          Length = 334

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 118/314 (37%), Positives = 171/314 (54%), Gaps = 36/314 (11%)

Query: 59  KFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNR 118
           K +K Y   E +D +++ FK N+         +   V G+ +F+DLT  E+++ +LG++ 
Sbjct: 40  KHNKAYHHHEFND-KYQTFKDNMDFIHNWNSKESDTVLGLNRFADLTNEEYKKTYLGMSI 98

Query: 119 RLRLPADAQKAPILPTNDL-------PTDFDWRDHGAVTGVKDQGACGSCWSFSATGALE 171
            + L A+      +P N L       P+  DWR +GAV  VKDQG CGSCW+F+ TGA+E
Sbjct: 99  NVNLRANQ-----VPMNGLNFERFTGPSSIDWRQNGAVAYVKDQGHCGSCWAFATTGAVE 153

Query: 172 GAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKD 231
           GAH + TG +V+ SEQ LVDC            ++GC+GGLM SAF+YI+   G+  E+ 
Sbjct: 154 GAHQIKTGNMVTFSEQHLVDCSGRYG-------NNGCDGGLMTSAFKYIIDNDGIATEEA 206

Query: 232 YPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTYI 289
           YPYT T    C ++ + +  A+S +  +    +      +   P+AV I+A  +  Q Y 
Sbjct: 207 YPYTATQ-NRCVYNTTMLGTAISGYKDVPRGSESALTAAISKQPVAVAIDASPITFQLYK 265

Query: 290 GGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMG 348
            GV     C  Y L+HGVL VGYG+        + K Y+I+KNSW E WG  GY  I M 
Sbjct: 266 SGVYQEATCSSYRLNHGVLAVGYGT-------LEGKDYYIVKNSWAETWGNQGY--ILMA 316

Query: 349 RNV---CGVDSMVS 359
           RN    CG+ +M S
Sbjct: 317 RNANNHCGIATMAS 330


>gi|74213650|dbj|BAE35627.1| unnamed protein product [Mus musculus]
          Length = 334

 Score =  205 bits (522), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 125/324 (38%), Positives = 173/324 (53%), Gaps = 24/324 (7%)

Query: 44  DHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHG----VT 99
           D   +AE H   +KS   + Y T EE ++R  +++ N+R  +          HG    + 
Sbjct: 22  DQTFSAEWH--QWKSTHRRLYGTNEE-EWRRAIWEKNMRMIQLHNGEYSNGQHGFSMEMN 78

Query: 100 KFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACG 159
            F D+T  EFR+   G   +        + P++    +P   DWR+ G VT VK+QG CG
Sbjct: 79  AFGDMTNEEFRQVVNGYRHQKHKKGRLFQEPLMLK--IPKSVDWREKGCVTPVKNQGQCG 136

Query: 160 SCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEY 219
           SCW+FSA+G LEG  FL TG+L+SLSEQ LVDC H          + GCNGGLM+ AF+Y
Sbjct: 137 SCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSH-------AQGNQGCNGGLMDFAFQY 189

Query: 220 ILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVG 279
           I + GG++ E+ YPY   D GSCK+      A  + F  I   E  +   +   GP++V 
Sbjct: 190 IKENGGLDSEESYPYEAKD-GSCKYRAEFAVANDTGFVDIPQQEKALMKAVATVGPISVA 248

Query: 280 INAVW--MQTYIGGVSC-PYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGEN 336
           ++A    +Q Y  G+   P    K LDHGVL+VGYG  G    + K   YW++KNSWG  
Sbjct: 249 MDASHPSLQFYSSGIYYEPNCSSKNLDHGVLLVGYGYEGTDSNKNK---YWLVKNSWGSE 305

Query: 337 WGENGYYKICMGR-NVCGVDSMVS 359
           WG  GY +I   R N CG+ +  S
Sbjct: 306 WGMEGYIEIAKDRDNHCGLATAAS 329


>gi|194320502|gb|ACF48469.1| cathepsin L [Triatoma brasiliensis]
          Length = 330

 Score =  205 bits (522), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 126/319 (39%), Positives = 175/319 (54%), Gaps = 31/319 (9%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAK----RRQLLDPTAVHGVTKFSDLTPSE 108
           + +FK+   KTY  Q E  +R ++F  N ++ +    + +  + +    +  F DL   E
Sbjct: 27  WHVFKAMHGKTYKNQFEEMFRMKIFMDNKKKIEAHNAKYEQGEVSYKMMMNHFGDLMVHE 86

Query: 109 FRRQFLGLNRRLRLPADAQKAPIL--PTN-DLPTDFDWRDHGAVTGVKDQGACGSCWSFS 165
           F+     L    ++  D ++   L  P+N +LP   DWR  GAVT VKDQG CGSCWSFS
Sbjct: 87  FK----ALMNGFKMSPDTKRNGELYFPSNSNLPKTVDWRQKGAVTPVKDQGQCGSCWSFS 142

Query: 166 ATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGG 225
           ATG+LEG  FL TG+LVSLSEQ LVDC        +   ++GC GGLM+ AF+Y+    G
Sbjct: 143 ATGSLEGQVFLKTGKLVSLSEQNLVDC-------STSYGNNGCEGGLMDQAFQYVSDNKG 195

Query: 226 VEREKDYPYTGTDGGSCKFDKSKIAAA-VSNFSVISSDEDQMAANLVKHGPLAVGINAVW 284
           ++ E  YPY   +  +C+F K+K+      +  + + DE  +   L   GP++V I+A  
Sbjct: 196 IDTEASYPYEARE-NTCRFKKNKVGGTDKGHVDIPAGDEKALQNALATVGPISVAIDANH 254

Query: 285 --MQTYIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENG 341
              Q Y  GV     C  Y LDHGVL VGYG+          + YW++KNSWG +WGENG
Sbjct: 255 GSFQFYSKGVYNEPNCSSYDLDHGVLAVGYGTE-------NGQDYWLVKNSWGPSWGENG 307

Query: 342 YYKICMGR-NVCGVDSMVS 359
           Y KI     N CG+ SM S
Sbjct: 308 YIKIARNHSNHCGIASMAS 326


>gi|403300987|ref|XP_003941193.1| PREDICTED: cathepsin L2 [Saimiri boliviensis boliviensis]
          Length = 333

 Score =  205 bits (522), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 126/320 (39%), Positives = 170/320 (53%), Gaps = 22/320 (6%)

Query: 48  NAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVT----KFSD 103
           N +  +  +K+   + Y+T EE  +R  V++ N++  +          HG T     F D
Sbjct: 24  NLDTQWYQWKATHRRLYSTNEE-GWRRAVWEKNMKMIELHNGEYSRGKHGFTMAMNAFGD 82

Query: 104 LTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWS 163
           +T  EFR+  +    +        + P+L   DLP   DWR  G VT VK+Q  CGSCW+
Sbjct: 83  MTNEEFRQVMVCFRNQKHKNGKVFRGPLLL--DLPKSVDWRKKGYVTPVKNQKQCGSCWA 140

Query: 164 FSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA 223
           FSATGALEG  F  TG+LVSLSEQ LVDC     P+     + GCNGG MN AF Y+ + 
Sbjct: 141 FSATGALEGQMFRKTGKLVSLSEQNLVDCSR---PQG----NQGCNGGFMNYAFRYVKEN 193

Query: 224 GGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAV 283
           GG++ E  YPY   D G CK+      A  + F VI + E ++   +   GP++V ++A 
Sbjct: 194 GGLDSEASYPYEAKD-GICKYKPENSVANDTGFVVIPTHEKELMKAVATVGPISVAVDAS 252

Query: 284 W--MQTYIGGVSCPYIC-GKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGEN 340
               Q Y  G+     C  K LDHGVL+VGY   GF     K+  YW+IKNSWG  WG N
Sbjct: 253 HSSFQFYKSGIYFEKKCSSKNLDHGVLVVGY---GFEGANSKDNKYWLIKNSWGPEWGLN 309

Query: 341 GYYKICMGRNV-CGVDSMVS 359
           GY KI   +N  CG+ +  S
Sbjct: 310 GYIKIAKDQNNHCGIATAAS 329


>gi|256082975|ref|XP_002577726.1| subfamily C1A unassigned peptidase (C01 family) [Schistosoma
           mansoni]
          Length = 1471

 Score =  205 bits (522), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 128/326 (39%), Positives = 169/326 (51%), Gaps = 38/326 (11%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRR----QLLDPTAVHGVTKFSDLTPSE 108
           +  FK +F + Y    E   RF +F AN  +        Q    T   GV +F+D T  E
Sbjct: 60  WKFFKIQFKRAYNGIHEETRRFFIFSANFVKMMEHNHAFQEGKVTYKMGVNEFTDKTDYE 119

Query: 109 FRRQFLGLNRRLRLPADA--QKAPILPTND---LPTDFDWRDHGAVTGVKDQGACGSCWS 163
            ++      R  ++ + A   K      ++   LP+  DWR  GAVT VK+QG CGSCW+
Sbjct: 120 LKKL-----RGYKVTSGAIRHKGSTFIRSEHTKLPSKVDWRREGAVTDVKNQGQCGSCWA 174

Query: 164 FSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA 223
           FS TGA+EG H+  T  LV+LSEQQLVDC            ++GC+GGLMNSAFEY+   
Sbjct: 175 FSTTGAIEGQHYRKTNRLVNLSEQQLVDCS-------KSYGNNGCSGGLMNSAFEYVRDN 227

Query: 224 GGVEREKDYPYT---GTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVG 279
            G++ E  YPY    GT+   C F+ S I A V+ + ++   DE  +   +   GP++V 
Sbjct: 228 EGIDSEISYPYVSGDGTENNRCLFNASNILAQVTGYVNIHEGDERALMDAVATKGPVSVA 287

Query: 280 INAVW--MQTYIGGVSCPYICG---KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWG 334
           INA       Y  G+     C      LDHGVL+VGYG           + YW+IKNSWG
Sbjct: 288 INAGLPSFSMYKSGIYSDTDCEGTLDALDHGVLVVGYGEEN-------GRSYWLIKNSWG 340

Query: 335 ENWGENGYYKICMG-RNVCGVDSMVS 359
           E WGE GY KI  G  N+CGV S  S
Sbjct: 341 EEWGEKGYIKISKGSHNMCGVASAAS 366


>gi|146215990|gb|ABQ10197.1| actinidin Act4a [Actinidia eriantha]
          Length = 385

 Score =  205 bits (522), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 114/308 (37%), Positives = 177/308 (57%), Gaps = 25/308 (8%)

Query: 53  FSLFKS---KFSKTYATQEEHDYRFRVFKANLRRAKRRQL-LDPTAVHGVTKFSDLTPSE 108
            ++F+S   ++ K+Y    E + RF +FK NLR        ++ +   G+ +FSDLT +E
Sbjct: 45  IAMFESWLVEYGKSYNALGEKERRFEIFKDNLRFVDEHNADVNRSYKVGLNQFSDLTDAE 104

Query: 109 FRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATG 168
           +   +LG    +R+   + +      + LP   DWR  GAV GVK+QG CGSCW+F++  
Sbjct: 105 YSSIYLGTKFNIRMTNVSDRYEPRVGDQLPDSVDWRKKGAVLGVKNQGNCGSCWTFASIA 164

Query: 169 ALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVER 228
           A+EG + + TG L+SLSEQ++VDC  +         ++GCNGG ++ A+++I+  GG+  
Sbjct: 165 AVEGINKIVTGNLISLSEQEIVDCQRKYP-------NNGCNGGTLSGAYQFIINNGGINT 217

Query: 229 EKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGI--NAVWMQ 286
           E +YPYTG DG   +  K+K    +  +  + S+ ++     V   P++V I  N+   +
Sbjct: 218 EANYPYTGRDGVCDQNKKNKKYVTIDRYENVPSNNEKALQKAVAFQPVSVVIASNSTAFK 277

Query: 287 TYIGGV-SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKI 345
           +Y  G+ + P  CG  +DHGV IVGYG+ G        K YWI++NSWG NWGE+GY  +
Sbjct: 278 SYKSGIFNGP--CGPRIDHGVTIVGYGTEG-------GKDYWIVRNSWGPNWGESGY--V 326

Query: 346 CMGRNVCG 353
            M RNV G
Sbjct: 327 RMQRNVGG 334


>gi|116779845|gb|ABK21448.1| unknown [Picea sitchensis]
 gi|116791731|gb|ABK26088.1| unknown [Picea sitchensis]
 gi|224286276|gb|ACN40847.1| unknown [Picea sitchensis]
          Length = 357

 Score =  205 bits (522), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 130/372 (34%), Positives = 200/372 (53%), Gaps = 38/372 (10%)

Query: 6   LSSLLLLLLSSVLASAVAVND----DDAMIRQVVPSDGEQSEDHLLN------AEHHFSL 55
           ++ +L ++LS++LA A+AV+     ++     +V    +  E  L            F+ 
Sbjct: 1   MARILAIVLSTLLALAIAVSAARSFEETEYIDMVTDKIQNLESSLFKILGTNPKSVQFAE 60

Query: 56  FKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLG 115
           F  ++ K Y +  +  +RF  F  N+   + R  ++      + +F+D+T  EF  Q+LG
Sbjct: 61  FALRYGKRYDSVRQLVHRFNAFVKNVELIESRNSMNLPYTLAINEFADITWEEFHGQYLG 120

Query: 116 LNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHF 175
            ++         K         PT  DWR+ G V+ VK+Q  CGSCW+FS TGALE A+ 
Sbjct: 121 ASQNCSATKSNHK---FTDAQPPTKKDWREEGIVSPVKNQAHCGSCWTFSTTGALEAAYT 177

Query: 176 LSTGELVSLSEQQLVDCDHECDPEESGSCDS-GCNGGLMNSAFEYILKAGGVEREKDYPY 234
            +TG+ V LSEQQLVDC        +G+ ++ GC+GGL + AFEYI   GG++ E+ YPY
Sbjct: 178 QATGKTVILSEQQLVDC--------AGAFNNFGCSGGLPSQAFEYIKYNGGLDTEEAYPY 229

Query: 235 TGTDGGSCKFDKSKIAAAVS---NFSVISSDEDQMAANLVKHGPLAVGINAVW-MQTYIG 290
           T  D G C +D + +   V+   N S+ + DE + A  LV+  P++V    +   + Y  
Sbjct: 230 TAKD-GVCNYDVNNVGVKVADSVNISLGAEDELKSAVGLVR--PVSVAFQVIQDFRFYKE 286

Query: 291 GVSCPYICGKY---LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICM 347
           GV     CG+    ++H VL VGYG S       +  P+WIIKNSWG++WG  GY+K+ M
Sbjct: 287 GVFTSTTCGQGPMDVNHAVLAVGYGVSE------EGTPHWIIKNSWGKSWGVEGYFKMEM 340

Query: 348 GRNVCGVDSMVS 359
           G+N+CGV +  S
Sbjct: 341 GKNMCGVATCAS 352


>gi|326493368|dbj|BAJ85145.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 436

 Score =  205 bits (522), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 123/336 (36%), Positives = 177/336 (52%), Gaps = 40/336 (11%)

Query: 35  VPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTA 94
           + S GE+SE+ +      ++ + ++   TY    E + RF  F+ NLR   +        
Sbjct: 28  IVSYGERSEEEV---RRMYAEWMAEHGSTYNAIGEEERRFEAFRDNLRYIDQHNAAADAG 84

Query: 95  VH----GVTKFSDLTPSEFRRQFLGL----NRRLRLPADAQKAPILPTNDLPTDFDWRDH 146
           VH    G+ +F+DLT  E+R  +LG     +R  +L A  Q A     ++LP   DWR  
Sbjct: 85  VHSFRLGLNRFADLTNEEYRSTYLGARTKPDRERKLSARYQAAD---NDELPESVDWRKK 141

Query: 147 GAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDS 206
           GAV  VKDQG CGSCW+FSA  A+EG + + TG+++ LSEQ+LVDCD         S + 
Sbjct: 142 GAVGAVKDQGGCGSCWAFSAIAAVEGINQIVTGDMIPLSEQELVDCDT--------SYNQ 193

Query: 207 GCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQM 266
           GCNGGLM+ AFE+I+  GG++ E+DYPY   D       K+     +  +  +  + ++ 
Sbjct: 194 GCNGGLMDYAFEFIINNGGIDSEEDYPYKERDNRCDANKKNAKVVTIDGYEDVPVNSEKS 253

Query: 267 AANLVKHGPLAVGINA--VWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEK 324
               V + P++V I A     Q Y  G+     CG  LDHGV  VGYG+          K
Sbjct: 254 LQKAVANQPISVAIEAGGRAFQLYKSGIFTG-TCGTALDHGVAAVGYGTE-------NGK 305

Query: 325 PYWIIKNSWGENWGENGYYKICMGRNV------CGV 354
            YW+++NSWG  WGE+GY  I M RN+      CG+
Sbjct: 306 DYWLVRNSWGSVWGEDGY--IRMERNIKASSGKCGI 339


>gi|537437|gb|AAC35211.1| cysteine proteinase [Hemerocallis hybrid cultivar]
          Length = 359

 Score =  205 bits (522), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 139/355 (39%), Positives = 186/355 (52%), Gaps = 37/355 (10%)

Query: 14  LSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQ---EEH 70
           LS  L S V V    A+  Q +P D    E  L + E  +SL++ K+   +A     ++ 
Sbjct: 4   LSYALLSVVLVLGSVALA-QSIPFD----EKDLASEESLWSLYE-KWRAHHAVSRDLDDT 57

Query: 71  DYRFRVFKANLRRAKR-RQLLDPTAVHGVTKFSDLTPSEFRRQFLGL----NRRLRLPAD 125
           D RF VFK N++      Q  D T    + KF D+T  EFR  + G     +  LR   D
Sbjct: 58  DKRFNVFKENVKFIHEFNQKKDATYKLALNKFGDMTNQEFRSTYAGSKIDHHMTLRGVKD 117

Query: 126 AQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLS 185
           A +      +DLPT  DWR+ GAVTGVKDQG CGSCW+FS   A+EG + + T ELVSLS
Sbjct: 118 AGEFSYEKFHDLPTSVDWREKGAVTGVKDQGQCGSCWAFSTVVAVEGINQIKTNELVSLS 177

Query: 186 EQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFD 245
           EQQLVDCD +         +SGCNGGLM+ AF++I   GG+  E  YPY   +  SC  +
Sbjct: 178 EQQLVDCDTK---------NSGCNGGLMDYAFDFIKNNGGLSSEDSYPYL-AEQKSCGSE 227

Query: 246 KSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSCPYICGKYLD 303
            +     +  +  +  + +      V + P++V I A     Q Y  GV   + CG  LD
Sbjct: 228 ANSAVVTIDGYQDVPRNNEAALMKAVANQPVSVAIEASGYAFQFYSQGVFSGH-CGTELD 286

Query: 304 HGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMG----RNVCGV 354
           HGV  VGYG      +    K YWI+KNSWGE WGE+GY ++  G    R  CG+
Sbjct: 287 HGVAAVGYG------VDDDGKKYWIVKNSWGEGWGESGYIRMERGIKDKRGKCGI 335


>gi|449513868|ref|XP_002191976.2| PREDICTED: cathepsin L1-like [Taeniopygia guttata]
          Length = 443

 Score =  205 bits (522), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 135/345 (39%), Positives = 181/345 (52%), Gaps = 30/345 (8%)

Query: 33  QVVPSDGEQSEDHLL-------NAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAK 85
           QV+P   E S + L          + H+ L+KS   K Y  +EE  +R  V++ NL+  +
Sbjct: 107 QVIPVTKENSTETLHCRWQVDPELDGHWQLWKSWHRKDYHEREE-GWRRVVWEKNLKMIE 165

Query: 86  RRQLLDPTAVH----GVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDL--PT 139
              L      H    G+ +F D+T  EFR+   G   + +     + +  L  N L  P 
Sbjct: 166 IHNLDHALGKHSYKLGMNQFGDMTTEEFRQLMNGYVHK-KSERKYRGSQFLEPNFLEAPR 224

Query: 140 DFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPE 199
             DWR+ G VT VKDQG CGSCW+FS TGALEG HF  TG+LVSLSEQ LVDC     PE
Sbjct: 225 SVDWREKGYVTPVKDQGQCGSCWAFSTTGALEGQHFRKTGKLVSLSEQNLVDCSR---PE 281

Query: 200 ESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNF-SV 258
                + GCNGGLM+ AF+Y+   GG++ E+ YPYT  D   C++     AA  + F  +
Sbjct: 282 ----GNQGCNGGLMDQAFQYVQDNGGIDSEESYPYTAKDDEDCRYKAEYNAANDTGFVDI 337

Query: 259 ISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSC-PYICGKYLDHGVLIVGYGSSG 315
               E  +   +   GP++V I+A     Q Y  G+   P    + LDHGVL+VGY   G
Sbjct: 338 PQGHERALMKAVAAVGPVSVAIDAGHSSFQFYQSGIYYEPDCSSEDLDHGVLVVGY---G 394

Query: 316 FAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVS 359
           F       K YWI+KNSWGE WG+ GY  +   R N CG+ +  S
Sbjct: 395 FEGEDVDGKKYWIVKNSWGEKWGDKGYIYMAKDRKNHCGIATAAS 439


>gi|74142447|dbj|BAE31977.1| unnamed protein product [Mus musculus]
          Length = 334

 Score =  205 bits (522), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 125/324 (38%), Positives = 173/324 (53%), Gaps = 24/324 (7%)

Query: 44  DHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHG----VT 99
           D   +AE H   +KS   + Y T EE ++R  +++ N+R  +          HG    + 
Sbjct: 22  DQTFSAEWH--QWKSTHRRLYGTNEE-EWRRAIWEKNMRMIQLHNGEYSNGQHGFSMEMN 78

Query: 100 KFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACG 159
            F D+T  EFR+   G   +        + P++    +P   DWR+ G VT VK++G CG
Sbjct: 79  AFGDMTNEEFRQVVNGYRHQKHKKGRLFQEPLMLK--IPKSVDWREKGCVTPVKNKGQCG 136

Query: 160 SCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEY 219
           SCW+FSA+G LEG  FL TG+L+SLSEQ LVDC H          + GCNGGLM+ AF+Y
Sbjct: 137 SCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSH-------AQGNQGCNGGLMDFAFQY 189

Query: 220 ILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVG 279
           I + GG++ E+ YPY   D GSCK+      A  + F  I   E  +   +   GP++V 
Sbjct: 190 IKENGGLDSEESYPYEAKD-GSCKYRAEFAVANDTGFVDIPQQEKALMKAVATVGPISVA 248

Query: 280 INAVW--MQTYIGGVSC-PYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGEN 336
           ++A    +Q Y  G+   P    K LDHGVL+VGYG  G    + K   YW++KNSWG  
Sbjct: 249 MDASHPSLQFYSSGIYYEPNCSSKNLDHGVLLVGYGYEGTDSNKNK---YWLVKNSWGSE 305

Query: 337 WGENGYYKICMGR-NVCGVDSMVS 359
           WG  GY KI   R N CG+ +  S
Sbjct: 306 WGMEGYIKIAKDRDNHCGLATAAS 329


>gi|328776427|ref|XP_625135.3| PREDICTED: cathepsin L-like [Apis mellifera]
          Length = 351

 Score =  205 bits (522), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 135/354 (38%), Positives = 188/354 (53%), Gaps = 41/354 (11%)

Query: 28  DAMIRQVVPSDGEQSEDH------LLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANL 81
           DA+++Q + +D  +S  H      L+N E  +  FK +  K Y +  E  +R ++F  N 
Sbjct: 7   DAVVQQKLTND--ESRTHAVSFFELVNQE--WMTFKMEHKKVYKSDVEERFRMKIFMDNK 62

Query: 82  RR-AKRRQLLDPTAVH---GVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAP-----IL 132
            + AK     +   V     + K+ D+   EF     G N+ +     +++ P     I 
Sbjct: 63  HKIAKHNSNYEMKKVSYKLKMNKYGDMLHHEFVNILNGFNKSINTQLRSERLPVGASFIE 122

Query: 133 PTND-LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVD 191
           P N  LP   DWR  GAVT VKDQG CGSCWSFSATGALEG HF  TG LVSLSEQ L+D
Sbjct: 123 PANVVLPKKVDWRKEGAVTPVKDQGHCGSCWSFSATGALEGQHFRRTGVLVSLSEQNLID 182

Query: 192 CDHECDPEESGSC-DSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIA 250
           C        SG   ++GCNGGLM+ AF+YI    G++ E  YPY   +   C+++ +   
Sbjct: 183 C--------SGKYGNNGCNGGLMDQAFQYIKDNKGLDTEASYPYE-AENDKCRYNPANSG 233

Query: 251 AA-VSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSC-PYICGKYLDHGV 306
           A  V    + + DE  + A +   GP++V I+A     Q Y  GV   P    + LDHGV
Sbjct: 234 AIDVGYIDIPTGDEKLLKAAVATIGPVSVAIDASHQSFQFYSEGVYYEPECSSEELDHGV 293

Query: 307 LIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVS 359
           L++GYG++         + YW++KNSWGE WG NGY K+   + N CG+ S  S
Sbjct: 294 LVIGYGTNENG------QDYWLVKNSWGETWGNNGYIKMARNKLNHCGIASSAS 341


>gi|18308182|gb|AAL67857.1|AF462309_1 cysteine proteinase [Acanthamoeba healyi]
          Length = 330

 Score =  205 bits (522), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 117/311 (37%), Positives = 170/311 (54%), Gaps = 25/311 (8%)

Query: 60  FSKTYATQEEHDYRFR------VFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQF 113
           F+K      + +YRF       +++ N+ R +     + +    + +F DLT +EF R F
Sbjct: 30  FAKWMRENTKSNYRFVYSNEEFIYRWNVWRDEEHNRQNKSYFLAMNQFGDLTNAEFNRLF 89

Query: 114 LGLNRRLRLPADAQKA-PILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEG 172
            GL       A    A P  P   +P++FDWR  GAVT VK+QG CGSCWSFS TG+ EG
Sbjct: 90  KGLAFDYSKHAKIHTAAPEAPATGIPSEFDWRQKGAVTHVKNQGQCGSCWSFSTTGSTEG 149

Query: 173 AHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDY 232
           A+FL TG LVSLSEQ L+DC            ++GCNGGLM+ AFEYI+   G++ E  Y
Sbjct: 150 ANFLKTGRLVSLSEQNLIDCSVSYG-------NNGCNGGLMDYAFEYIINNRGIDTEASY 202

Query: 233 PYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIG 290
           PY      +C+++ +    +++ ++ ++S ++    N     P++V I+A     Q Y G
Sbjct: 203 PYQTAGPLTCQYNAANKGGSLTGYTDVTSGDENALLNAAVKEPVSVAIDASHNSFQFYSG 262

Query: 291 GVSCPYICGK-YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR 349
           GV     C    LDHGVL+VG+GS          + +W +KNSWG +WG NGY K+   +
Sbjct: 263 GVYYESACSSTQLDHGVLVVGWGSE-------NGQDFWWVKNSWGASWGLNGYIKMSRNQ 315

Query: 350 -NVCGVDSMVS 359
            N CG+ +  S
Sbjct: 316 NNNCGIATAAS 326


>gi|91992508|gb|ABE72970.1| cathepsin L [Aedes aegypti]
          Length = 339

 Score =  205 bits (522), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 131/324 (40%), Positives = 176/324 (54%), Gaps = 32/324 (9%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRR-AKRRQLLDPTAVH---GVTKFSDLTPSE 108
           ++ FK +  K Y ++ E   R +++  N  + AK  Q  D         V K++DL   E
Sbjct: 27  WNAFKLQHRKNYDSETEERIRLKIYVQNKHKIAKHNQRFDLGQEKYRLRVNKYADLLHEE 86

Query: 109 FRRQFLGLNR---RLRLPADAQKAPIL---PTN-DLPTDFDWRDHGAVTGVKDQGACGSC 161
           F +   G NR   +  L     + P+    P N ++PT  DWR  GAVT VKDQG CGSC
Sbjct: 87  FVQTVNGFNRTDSKKSLKGVRIEEPVTFIEPANVEVPTTVDWRKKGAVTPVKDQGHCGSC 146

Query: 162 WSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSC-DSGCNGGLMNSAFEYI 220
           WSFSATGALEG HF  TG+LVSLSEQ LVDC        SG   ++GCNGG+M+ AF+YI
Sbjct: 147 WSFSATGALEGQHFRKTGKLVSLSEQNLVDC--------SGKYGNNGCNGGMMDYAFQYI 198

Query: 221 LKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVG 279
              GG++ EK YPY   D  +C F+   + A    +  +   DE+ +   L   GP+++ 
Sbjct: 199 KDNGGIDTEKSYPYEAID-DTCHFNPKAVGATDKGYVDIPQGDEEALKKALATVGPVSIA 257

Query: 280 INAVW--MQTYIGGVSCPYIC-GKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGEN 336
           I+A     Q Y  GV     C  + LDHGVL VGYG+S       + + YW++KNSWG  
Sbjct: 258 IDASHESFQFYSEGVYYEPQCDSENLDHGVLAVGYGTSE------EGEDYWLVKNSWGTT 311

Query: 337 WGENGYYKICMGR-NVCGVDSMVS 359
           WG+ GY K+     N CGV +  S
Sbjct: 312 WGDQGYVKMARNHDNHCGVATCAS 335


>gi|186516984|ref|NP_195406.2| cysteine proteinase1 [Arabidopsis thaliana]
 gi|15290508|gb|AAK92229.1| cysteine proteinase [Arabidopsis thaliana]
 gi|332661313|gb|AEE86713.1| cysteine proteinase1 [Arabidopsis thaliana]
          Length = 376

 Score =  205 bits (521), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 126/342 (36%), Positives = 179/342 (52%), Gaps = 34/342 (9%)

Query: 35  VPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQE----EHDYRFRVFKANLRRAKRRQLL 90
           +PSDG+   D  + +   +  + ++  KT         + D RF +FK NLR        
Sbjct: 33  LPSDGKWRTDEEVRS--IYLQWSAEHGKTNNNNNGIINDQDKRFNIFKDNLRFIDLHNEN 90

Query: 91  DPTAVH--GVTKFSDLTPSEFRRQFLGLN----RRLRLPADAQKAPILPTN--DLPTDFD 142
           +  A +  G+TKF+DLT  E+R+ +LG      RR+    +  +      N  ++P   D
Sbjct: 91  NKNATYKLGLTKFTDLTNDEYRKLYLGARTEPARRIAKAKNVNQKYSAAVNGKEVPETVD 150

Query: 143 WRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESG 202
           WR  GAV  +KDQG CGSCW+FS T A+EG + + TGEL+SLSEQ+LVDCD         
Sbjct: 151 WRQKGAVNPIKDQGTCGSCWAFSTTAAVEGINKIVTGELISLSEQELVDCDK-------- 202

Query: 203 SCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSD 262
           S + GCNGGLM+ AF++I+K GG+  EKDYPY G  G    F K+    ++  +  + + 
Sbjct: 203 SYNQGCNGGLMDYAFQFIMKNGGLNTEKDYPYRGFGGKCNSFLKNSRVVSIDGYEDVPTK 262

Query: 263 EDQMAANLVKHGPLAVGINA--VWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIR 320
           ++      + + P++V I A     Q Y  G+     CG  LDH V+ VGYGS       
Sbjct: 263 DETALKKAISYQPVSVAIEAGGRIFQHYQSGIFTGS-CGTNLDHAVVAVGYGSENGV--- 318

Query: 321 FKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVA 362
                YWI++NSWG  WGE GY  I M RN+    S    +A
Sbjct: 319 ----DYWIVRNSWGPRWGEEGY--IRMERNLAASKSGKCGIA 354


>gi|2352469|gb|AAC00067.1| cysteine protease [Trypanosoma cruzi]
          Length = 471

 Score =  205 bits (521), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 133/368 (36%), Positives = 181/368 (49%), Gaps = 55/368 (14%)

Query: 4   LILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKT 63
           ++L+++L+++   V A+  +++ ++ +  Q                   F+ FK K  + 
Sbjct: 8   VLLAAVLVVMACLVPAATASLHAEETLTSQ-------------------FAEFKQKHGRV 48

Query: 64  YATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ-------FLGL 116
           Y +         VF+ NL  A+     +P A  GVT FSDLT  EFR +       F   
Sbjct: 49  YESAARR-LPLSVFRENLFLARLHAAANPHATFGVTPFSDLTREEFRSRYHNGAAHFAAA 107

Query: 117 NRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFL 176
             R R+P   +          P   DWR  GAVT VKDQG CGSCW+FSA G +E   FL
Sbjct: 108 QERARVPVKVEVV------GAPAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFL 161

Query: 177 STGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA--GGVEREKDYPY 234
           +   L +LSEQ LV CD           D GC+GGLMN+AFE+I++   G V  E  YPY
Sbjct: 162 AGHPLTNLSEQMLVSCDKT---------DFGCSGGLMNNAFEWIVQENNGAVYTEDSYPY 212

Query: 235 TGTDGGS--CKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGV 292
              +G S  C      + A ++    +  DE Q+AA +  +GP+AV ++A    TY GGV
Sbjct: 213 ASGEGISPPCTTSGHTVGATITGHVELPQDEAQIAACVAVNGPVAVAVDASSWMTYTGGV 272

Query: 293 SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVC 352
               +  + LDHGVL+VGY  S          PYWIIKNSW    GE GY +I  G N C
Sbjct: 273 MTSCV-SEQLDHGVLLVGYNDSA-------AVPYWIIKNSWTTQ-GEEGYIRIAKGSNQC 323

Query: 353 GVDSMVSS 360
            V    SS
Sbjct: 324 LVKEEASS 331


>gi|323451241|gb|EGB07119.1| hypothetical protein AURANDRAFT_54023 [Aureococcus anophagefferens]
          Length = 377

 Score =  205 bits (521), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 127/319 (39%), Positives = 175/319 (54%), Gaps = 23/319 (7%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGV-TKFSDLTPSEFRR 111
           F  F +KF KTY T EE  +R  VF  N +              G+  +F+D T  EF  
Sbjct: 65  FMTFMTKFEKTYETVEEWAHRLTVFAQNAKIVLEHDAKAEGFALGLDNQFADWTAEEFA- 123

Query: 112 QFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALE 171
            +  L+ R + P+ A     +     PT  DWR  G V  +K+QG+CGSCW+FS   ++E
Sbjct: 124 SYQKLHSRPK-PSQAGATHEVSDKAAPTAVDWRTEGVVADIKNQGSCGSCWTFSTVVSIE 182

Query: 172 GAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA--GGVERE 229
           GA    TG+LV+LSEQ LVDC  +   +    C  GC+GGLM++AF+YI+K   GG++ E
Sbjct: 183 GAAARKTGKLVTLSEQNLVDCVKKDQIDGGDECCMGCSGGLMDNAFDYIIKNQDGGIDTE 242

Query: 230 KDYPYTGTDGGSCKFDKSKIAAAVSNFS-VISSDEDQMAANLVKHGPLAVGINAV--WMQ 286
             Y YTG D G+C FDK+ + A +SN++ V   DE  +A  L   GP+++ ++A   W Q
Sbjct: 243 ASYGYTGKD-GTCAFDKANVGATISNWTDVAVGDEVALADALANAGPVSIALDASKQW-Q 300

Query: 287 TYIGGVSCPY-ICG-----KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGEN 340
            Y GG+  P  I G      + DHGV IVGYG+            YW I+NSWG  WGE+
Sbjct: 301 LYSGGILKPRSILGCSSDPTHADHGVAIVGYGTD-------DGVDYWWIRNSWGTTWGES 353

Query: 341 GYYKICMGRNVCGVDSMVS 359
           GY ++  G N CGV +  S
Sbjct: 354 GYMRLERGVNACGVANFAS 372


>gi|255550445|ref|XP_002516273.1| cysteine protease, putative [Ricinus communis]
 gi|223544759|gb|EEF46275.1| cysteine protease, putative [Ricinus communis]
          Length = 358

 Score =  205 bits (521), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 130/317 (41%), Positives = 179/317 (56%), Gaps = 32/317 (10%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLR--RAKRRQLLDPTAVHGVTKFSDLTPSEFR 110
           FS F  +  K Y +++E   RF +F  NL   R+  R+ L  T    V  F+DLT  EF+
Sbjct: 59  FSRFVYRHGKRYQSEDEMKMRFAIFSENLDFIRSTNRKGLSYTLA--VNDFADLTWQEFQ 116

Query: 111 RQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGAL 170
           +  LG  +     A  +    L    LP   DWR+ G V+ VK+QG CGSCW+FS TGAL
Sbjct: 117 KHRLGAAQNC--SATTKGNHKLTGVALPDTKDWREVGIVSPVKNQGHCGSCWTFSTTGAL 174

Query: 171 EGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDS-GCNGGLMNSAFEYILKAGGVERE 229
           E A+  + G+ +SLSEQQLVDC        +G+ ++ GC+GGL + AFEYI   GG+E E
Sbjct: 175 EAAYHQAFGKGISLSEQQLVDC--------AGAFNNFGCHGGLPSQAFEYIKYNGGLETE 226

Query: 230 KDYPYTGTDGGSCKFDKSKIAAAV---SNFSVISSDEDQMAANLVKHGPLAVGINAV-WM 285
           + YPYTG D G+CKF    +   V    N ++ + DE + A  LV+  P++V    V   
Sbjct: 227 EAYPYTGED-GACKFSSENVGIQVLDSVNITLGAEDELKEAVGLVR--PVSVAFEVVSGF 283

Query: 286 QTYIGGVSCPYICGKY---LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGY 342
           + Y  GV     CG     ++H VL VGYG            PYW++KNSWGENWG++GY
Sbjct: 284 RFYKSGVYTSDTCGSTPMDVNHAVLAVGYGVE-------DGVPYWLVKNSWGENWGDHGY 336

Query: 343 YKICMGRNVCGVDSMVS 359
           +K+ MG+N+CGV +  S
Sbjct: 337 FKMEMGKNMCGVATCAS 353


>gi|46395939|sp|Q94B08.2|GCP1_ARATH RecName: Full=Germination-specific cysteine protease 1; Flags:
           Precursor
 gi|4006883|emb|CAB16767.1| cysteine proteinase [Arabidopsis thaliana]
 gi|7270637|emb|CAB80354.1| cysteine proteinase [Arabidopsis thaliana]
          Length = 376

 Score =  205 bits (521), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 126/342 (36%), Positives = 179/342 (52%), Gaps = 34/342 (9%)

Query: 35  VPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQE----EHDYRFRVFKANLRRAKRRQLL 90
           +PSDG+   D  + +   +  + ++  KT         + D RF +FK NLR        
Sbjct: 33  LPSDGKWRTDEEVRS--IYLQWSAEHGKTNNNNNGIINDQDKRFNIFKDNLRFIDLHNED 90

Query: 91  DPTAVH--GVTKFSDLTPSEFRRQFLGLN----RRLRLPADAQKAPILPTN--DLPTDFD 142
           +  A +  G+TKF+DLT  E+R+ +LG      RR+    +  +      N  ++P   D
Sbjct: 91  NKNATYKLGLTKFTDLTNDEYRKLYLGARTEPARRIAKAKNVNQKYSAAVNGKEVPETVD 150

Query: 143 WRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESG 202
           WR  GAV  +KDQG CGSCW+FS T A+EG + + TGEL+SLSEQ+LVDCD         
Sbjct: 151 WRQKGAVNPIKDQGTCGSCWAFSTTAAVEGINKIVTGELISLSEQELVDCDK-------- 202

Query: 203 SCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSD 262
           S + GCNGGLM+ AF++I+K GG+  EKDYPY G  G    F K+    ++  +  + + 
Sbjct: 203 SYNQGCNGGLMDYAFQFIMKNGGLNTEKDYPYRGFGGKCNSFLKNSRVVSIDGYEDVPTK 262

Query: 263 EDQMAANLVKHGPLAVGINA--VWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIR 320
           ++      + + P++V I A     Q Y  G+     CG  LDH V+ VGYGS       
Sbjct: 263 DETALKKAISYQPVSVAIEAGGRIFQHYQSGIFTGS-CGTNLDHAVVAVGYGSENGV--- 318

Query: 321 FKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVA 362
                YWI++NSWG  WGE GY  I M RN+    S    +A
Sbjct: 319 ----DYWIVRNSWGPRWGEEGY--IRMERNLAASKSGKCGIA 354


>gi|255646767|gb|ACU23856.1| unknown [Glycine max]
          Length = 350

 Score =  205 bits (521), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 132/365 (36%), Positives = 196/365 (53%), Gaps = 41/365 (11%)

Query: 8   SLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQ 67
           +L+L+  S  L +++A   D +++     S+  +S D L+     F  + S+  K Y   
Sbjct: 8   ALVLIACSFCLFASLAFGRDFSIVG--YSSEDLKSMDKLIEL---FESWMSRHGKIYENI 62

Query: 68  EEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGL----NRRLRLP 123
           EE   RF +FK NL+    R  +      G+++F+DL+  EF  ++LGL    +RR   P
Sbjct: 63  EEKLLRFEIFKDNLKHIDERNKVVSNYWLGLSEFADLSHREFNNKYLGLKVDYSRRRESP 122

Query: 124 ADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVS 183
            +     +    +LP   DWR  GAV  VK+QG+CGSCW+FS   A+EG + + TG L S
Sbjct: 123 EEFTYKDV----ELPKSVDWRKKGAVAPVKNQGSCGSCWAFSTVAAVEGINQIVTGNLTS 178

Query: 184 LSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCK 243
           LSEQ+L+DCD         + ++GCNGGLM+ AF +I++ GG+ +E+DYPY   + G+C+
Sbjct: 179 LSEQELIDCDR--------TYNNGCNGGLMDYAFSFIVENGGLHKEEDYPYI-MEEGACE 229

Query: 244 FDKSKI-AAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGK 300
             K +     +S +  +  + +Q     + + PL+V I A     Q Y GGV   + CG 
Sbjct: 230 MTKEETQVVTISGYHDVPQNNEQSLLKALANQPLSVAIEASGRDFQFYSGGVFDGH-CGS 288

Query: 301 YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRN------VCGV 354
            LDHGV  VGYG++       K   Y  +KNSWG  WGE GY  I M RN      +CG+
Sbjct: 289 DLDHGVAAVGYGTA-------KGVDYITVKNSWGSKWGEKGY--IRMRRNIGKPEGICGI 339

Query: 355 DSMVS 359
             M S
Sbjct: 340 YKMAS 344


>gi|394331826|gb|AFN27132.1| cysteine protease [Leishmania tropica]
          Length = 443

 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 124/313 (39%), Positives = 166/313 (53%), Gaps = 34/313 (10%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           F  FK  + + Y T  E   R   F+ NL   +  Q  +P A  G+TKF DL+ +EF  +
Sbjct: 38  FEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 113 FLGLNRRLRLPADAQKA------PILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSA 166
           +L  N      A  Q A           + +P   DWR  GAVT VKDQGACGSCW+FSA
Sbjct: 98  YL--NGAAYFAAAKQHAGQHYRKARADLSAVPDAVDWRKKGAVTPVKDQGACGSCWAFSA 155

Query: 167 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK--AG 224
            G++E    L+   L +LSEQQLV CD +         D+GC+GGLM  AFE++L+   G
Sbjct: 156 VGSIESQWALAGHGLTALSEQQLVSCDDK---------DNGCSGGLMLQAFEWLLRNMNG 206

Query: 225 GVEREKDYPYTGTDG--GSCKFDKSKIAAA-VSNFSVISSDEDQMAANLVKHGPLAVGIN 281
            +  E  YPY  + G    C      +  A +  +  I S E    A L K+GP+++ ++
Sbjct: 207 TMFTEDSYPYVSSSGYVPECSNSSQLVPGARIEGYMTIESSETVKGAWLAKNGPISIAVD 266

Query: 282 AVWMQTYIGGV--SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGE 339
           A    +Y  GV  SC    G  L+HGVL+VGY  +G       E PYW+IKNSWGE+WGE
Sbjct: 267 ASSFMSYQSGVLTSC---AGDALNHGVLLVGYNRTG-------EVPYWVIKNSWGEDWGE 316

Query: 340 NGYYKICMGRNVC 352
            GY ++ MG N C
Sbjct: 317 KGYVRVTMGVNAC 329


>gi|281204231|gb|EFA78427.1| cysteine proteinase 3 [Polysphondylium pallidum PN500]
          Length = 329

 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 128/329 (38%), Positives = 171/329 (51%), Gaps = 39/329 (11%)

Query: 47  LNAEHHFSLFKSKFSKTYATQE------EHDYRFRVFKANLRRAKRRQLLDPTAVHGVTK 100
           L AE H+   +++F+     Q+      E   R+  FK NL    R   ++     G T 
Sbjct: 19  LFAEKHY---QNQFTNWMVVQDRQYDAYEFRTRYSAFKDNLDFIHRWNAVNKETELGATV 75

Query: 101 FSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPT------NDLPTDFDWRDHGAVTGVKD 154
           F+DLT  E+R  +LG+N       DA      P         + +  DWR++GAV  VKD
Sbjct: 76  FADLTNEEYRAVYLGMN------VDASNFAAQPATLDQVYQPVRSTLDWRNNGAVGRVKD 129

Query: 155 QGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMN 214
           QG CGSCW+FS TGA+EGAH ++TG  VSLSEQQL+DC            + GC GGLM+
Sbjct: 130 QGQCGSCWAFSTTGAVEGAHQIATGNFVSLSEQQLMDCSRSYG-------NHGCQGGLMD 182

Query: 215 SAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHG 274
           SA  YI+K GG+  E+ YPY   D  +CK++ +   A +S +S I    +   A  +  G
Sbjct: 183 SAMSYIVKQGGINTEESYPYEMRDSYTCKYNPANNGAKLSGYSNIKRGSEADLAAKLNIG 242

Query: 275 PLAVGINAVW--MQTYIGGVSC-PYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKN 331
           P+A+ ++A     Q Y  GV   P      L HGVL VGYG+ G          YWI+KN
Sbjct: 243 PVAIALDASHSSFQLYKSGVFYDPACSSTSLSHGVLAVGYGTEG-------SSAYWIVKN 295

Query: 332 SWGENWGENGYYKICMGRNV-CGVDSMVS 359
           SWG  WG+ GY  I   RN  CGV +M S
Sbjct: 296 SWGTRWGDAGYIWIAKDRNNHCGVATMSS 324


>gi|357467173|ref|XP_003603871.1| Cysteine proteinase [Medicago truncatula]
 gi|355492919|gb|AES74122.1| Cysteine proteinase [Medicago truncatula]
 gi|388499154|gb|AFK37643.1| unknown [Medicago truncatula]
          Length = 350

 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 134/360 (37%), Positives = 192/360 (53%), Gaps = 34/360 (9%)

Query: 10  LLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEE 69
           L+L  S  L  ++A   D +++     S+  +S D L+     F  + S+  K Y T EE
Sbjct: 9   LVLTCSLCLFLSLAFGRDFSIVG--YSSEDLKSMDKLIEL---FESWMSRHGKIYETIEE 63

Query: 70  HDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKA 129
              RF VFK NL+    R  +      G+ +F+DL+  EF+ ++LGL   L    ++ + 
Sbjct: 64  KLLRFEVFKDNLKHIDDRNKVVSNYWLGLNEFADLSHQEFKNKYLGLKVDLSQRRESSEE 123

Query: 130 PILPTN-DLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQ 188
                + DLP   DWR  GAVT VK+QG CGSCW+FS   A+EG + + TG L SLSEQ+
Sbjct: 124 EFTYRDVDLPKSVDWRKKGAVTPVKNQGQCGSCWAFSTVAAVEGINQIVTGNLTSLSEQE 183

Query: 189 LVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKS- 247
           L+DCD         + ++GCNGGLM+ AF +I+K GG+ +E+DYPY   +  +C+  K  
Sbjct: 184 LIDCDT--------TYNNGCNGGLMDYAFSFIVKNGGLHKEEDYPYI-MEESTCEMKKEV 234

Query: 248 KIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKYLDHG 305
                ++ +  +  + +Q     + + PL+V I A     Q Y GGV   + CG  LDHG
Sbjct: 235 SEVVTINGYHDVPQNNEQSLLKALANQPLSVAIEASGRDFQFYSGGVFDGH-CGSELDHG 293

Query: 306 VLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRN------VCGVDSMVS 359
           V  VGYG+S       K   Y I+KNSWG  WGE G+  I M RN      +CG+  M S
Sbjct: 294 VSAVGYGTS-------KGLDYIIVKNSWGAKWGEKGF--IRMKRNIGKSEGICGLYKMAS 344


>gi|260516654|gb|ACX43954.1| cysteine protease 1 [Brachiaria hybrid cultivar]
 gi|260516656|gb|ACX43955.1| cysteine protease 1 [Brachiaria hybrid cultivar]
 gi|260516658|gb|ACX43956.1| cysteine protease 1 [Brachiaria hybrid cultivar]
 gi|260516660|gb|ACX43957.1| cysteine protease 1 [Brachiaria hybrid cultivar]
 gi|260516662|gb|ACX43958.1| cysteine protease 2 [Brachiaria hybrid cultivar]
 gi|260516664|gb|ACX43959.1| cysteine protease 2 [Brachiaria hybrid cultivar]
 gi|260516666|gb|ACX43960.1| cysteine protease 2 [Brachiaria hybrid cultivar]
 gi|260516668|gb|ACX43961.1| cysteine protease 2 [Brachiaria hybrid cultivar]
 gi|260516670|gb|ACX43962.1| cysteine protease 2 [Brachiaria hybrid cultivar]
          Length = 338

 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 127/330 (38%), Positives = 175/330 (53%), Gaps = 30/330 (9%)

Query: 29  AMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAK-RR 87
           A+  + VPS+        +  +  F+ F  ++SK Y +  E   RF  FKAN+   +   
Sbjct: 26  ALFSEEVPSE--------VMLQDMFTAFMKQYSKAY-SHAEFSSRFNQFKANVETIRLHN 76

Query: 88  QLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHG 147
            L + +   G+ +F+DL+  EF+ ++ G     R  A +           PT  DWR   
Sbjct: 77  TLANASYTMGLNEFADLSFEEFKGKYFGYKHVEREFARSNNLH-QEVEAAPTSIDWRTSN 135

Query: 148 AVTGVKDQGACGSCWSFSATGALEGAHFLSTGE-LVSLSEQQLVDCDHECDPEESGSCDS 206
           AVT +KDQG CGSCW+FSATG++EGA  L     L SLSEQQLVDC        +   ++
Sbjct: 136 AVTPIKDQGQCGSCWAFSATGSIEGAWVLQGKHTLTSLSEQQLVDCS-------TSYGNA 188

Query: 207 GCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQM 266
           GCNGGLM+ AFEYI+   G+  E  YPY G  GG C+   +K+        V S DE  +
Sbjct: 189 GCNGGLMDYAFEYIIANKGICAESAYPYKGV-GGLCQKSCTKVVTISGYKDVASGDEASL 247

Query: 267 AANLVKHGPLAVGINA--VWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEK 324
              +   GP++V I A     Q Y  GV     CG  LDHGVL VGYG++G        +
Sbjct: 248 LNAVGTVGPVSVAIEADQAGFQFYSSGVFSG-TCGHNLDHGVLAVGYGTTG-------SQ 299

Query: 325 PYWIIKNSWGENWGENGYYKICMGRNVCGV 354
            YWI+KNSWG +WGE+GY ++   +N CG+
Sbjct: 300 DYWIVKNSWGTSWGESGYIRMIRNKNQCGI 329


>gi|307110445|gb|EFN58681.1| hypothetical protein CHLNCDRAFT_56822 [Chlorella variabilis]
          Length = 466

 Score =  204 bits (520), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 125/346 (36%), Positives = 182/346 (52%), Gaps = 27/346 (7%)

Query: 4   LILSSLLLLLLSSV-LASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSK 62
           + LS +LL+  S + +A+     +    I+Q V S  E            F  +     +
Sbjct: 1   MRLSCVLLVACSCLAVAAGFPFENHRLFIQQAVESPREA-----------FDFWVQTLKR 49

Query: 63  TYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRL 122
            YA+ EE++ RF V+  NLR          +    +  ++DL+  E+R + LG N  L  
Sbjct: 50  AYASAEEYERRFDVWLDNLRFVHEYNAGHTSHWLSMGVYADLSQDEYRSKALGYNADLHE 109

Query: 123 PADAQKAPILPTNDLP-TDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGEL 181
               + AP L    +P  + DW   GAVT VK+Q  CGSCW+FS TGA+EGA  ++TG+L
Sbjct: 110 ERPLRAAPFLYEGTVPPKEVDWVAKGAVTPVKNQLLCGSCWAFSTTGAVEGASAIATGKL 169

Query: 182 VSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGS 241
            SLSEQ LVDCD E         D+GC+GGLM+ AFE+I+K GG++ E DYPYT  +G  
Sbjct: 170 ASLSEQMLVDCDRE--------RDNGCHGGLMDFAFEFIMKNGGIDTEDDYPYTAEEGMC 221

Query: 242 CKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSCPYICG 299
                 +    + ++  +  +++      V + P++V I A     Q Y GGV     CG
Sbjct: 222 QDNKMRRHVVTIDDYQDVPPNDEHALMKAVANQPVSVAIEADQRAFQLYGGGVF-DAECG 280

Query: 300 KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKI 345
             LDHGVL+VGYG++          PYW++KNSWG  WG+ GY ++
Sbjct: 281 TALDHGVLVVGYGTASNGTHHL---PYWLVKNSWGAEWGDKGYIRL 323


>gi|151573016|gb|ABS17683.1| cathepsin L-1 [Artemia persimilis]
          Length = 334

 Score =  204 bits (520), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 127/327 (38%), Positives = 174/327 (53%), Gaps = 29/327 (8%)

Query: 45  HLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLL----DPTAVHGVTK 100
           +LL  E H  LFK+   K Y +Q E  +R +++  N  +  +  +L    + +    + K
Sbjct: 21  NLLADEWH--LFKATHKKEYPSQLEEKFRMKIYLENKHKVAKHNILFEKGEKSYQVAMNK 78

Query: 101 FSDLTPSEFRRQFLGLNRRLRLPADAQKAPIL--PTN-DLPTDFDWRDHGAVTGVKDQGA 157
           F DL   EFR    G   + +  + A+       P N ++P   DWR+ GA+T VKDQG 
Sbjct: 79  FGDLLHHEFRSIMNGYQHKKQNSSRAESTFTFMEPANVEVPESVDWREKGAITPVKDQGQ 138

Query: 158 CGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAF 217
           CG CW+FS+TGALEG  F  TG+LVSL EQ L+DC  +   E       GCNGGLM+ AF
Sbjct: 139 CGPCWAFSSTGALEGQTFRKTGKLVSLREQNLIDCSGKYGNE-------GCNGGLMDQAF 191

Query: 218 EYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPL 276
           +YI    G++ E  YPY   D   C+++     A    F  + S +ED++ A +   GP+
Sbjct: 192 QYIKDNKGIDTENTYPYEAED-DVCRYNPRNRGAVDRGFVDIPSGEEDKLKAAVATVGPV 250

Query: 277 AVGINAVW--MQTYIGGVSCPYIC-GKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSW 333
           +V I+A     Q Y  GV     C    LDHGVL+VGYGS          K YW++KNSW
Sbjct: 251 SVAIDASHESFQFYSKGVYYEPSCDSDDLDHGVLVVGYGSDN-------GKDYWLVKNSW 303

Query: 334 GENWGENGYYKICMGR-NVCGVDSMVS 359
            E+WG+ GY KI   R N CGV +  S
Sbjct: 304 SEHWGDQGYIKIARNRKNHCGVATAAS 330


>gi|356517188|ref|XP_003527271.1| PREDICTED: xylem cysteine proteinase 2-like [Glycine max]
          Length = 350

 Score =  204 bits (520), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 132/365 (36%), Positives = 195/365 (53%), Gaps = 41/365 (11%)

Query: 8   SLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQ 67
           +L+L+  S  L +++A   D +++     S+  +S D L+     F  + S+  K Y   
Sbjct: 8   ALVLIACSFCLFASLAFGRDFSIVG--YSSEDLKSMDKLIEL---FESWMSRHGKIYENI 62

Query: 68  EEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGL----NRRLRLP 123
           EE   RF +FK NL+    R  +      G+ +F+DL+  EF  ++LGL    +RR   P
Sbjct: 63  EEKLLRFEIFKDNLKHIDERNKVVSNYWLGLNEFADLSHREFNNKYLGLKVDYSRRRESP 122

Query: 124 ADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVS 183
            +     +    +LP   DWR  GAV  VK+QG+CGSCW+FS   A+EG + + TG L S
Sbjct: 123 EEFTYKDV----ELPKSVDWRKKGAVAPVKNQGSCGSCWAFSTVAAVEGINQIVTGNLTS 178

Query: 184 LSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCK 243
           LSEQ+L+DCD         + ++GCNGGLM+ AF +I++ GG+ +E+DYPY   + G+C+
Sbjct: 179 LSEQELIDCDR--------TYNNGCNGGLMDYAFSFIVENGGLHKEEDYPYI-MEEGTCE 229

Query: 244 FDKSKI-AAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGK 300
             K +     +S +  +  + +Q     + + PL+V I A     Q Y GGV   + CG 
Sbjct: 230 MTKEETQVVTISGYHDVPQNNEQSLLKALANQPLSVAIEASGRDFQFYSGGVFDGH-CGS 288

Query: 301 YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRN------VCGV 354
            LDHGV  VGYG++       K   Y  +KNSWG  WGE GY  I M RN      +CG+
Sbjct: 289 DLDHGVAAVGYGTA-------KGVDYITVKNSWGSKWGEKGY--IRMRRNIGKPEGICGI 339

Query: 355 DSMVS 359
             M S
Sbjct: 340 YKMAS 344


>gi|297745594|emb|CBI40759.3| unnamed protein product [Vitis vinifera]
          Length = 300

 Score =  204 bits (520), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 124/312 (39%), Positives = 172/312 (55%), Gaps = 29/312 (9%)

Query: 58  SKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLN 117
           SK  K+Y + EE  +RF VF+ NL+          +   G+ +F+DL+  EF+R++LGL 
Sbjct: 2   SKHGKSYRSFEEKLHRFEVFQDNLKHIDETNKKVSSYWLGLNEFADLSHEEFKRKYLGLK 61

Query: 118 RRLRLPADA-QKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFL 176
             L    D+ ++       DLP   DWR  GAV  VK+QGACGSCW+FS   A+EG + +
Sbjct: 62  IELPKRRDSPEEFSYKDVADLPKSVDWRKKGAVAHVKNQGACGSCWAFSTVAAVEGINQI 121

Query: 177 STGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTG 236
            TG L +LSEQ+L+DCD           ++GCNGGLM+ AF +I+  GG+ +E+DYPY  
Sbjct: 122 VTGNLTALSEQELIDCDK--------PFNNGCNGGLMDYAFAFIISNGGLRKEEDYPYV- 172

Query: 237 TDGGSCKFDKSKI-AAAVSNFSVISSDEDQMAANLVKHGPLAVGINAV--WMQTYIGGVS 293
            + G+C   K ++    +S +  +  D +Q     + + PL+V I A     Q Y GG+ 
Sbjct: 173 MEEGTCGEKKEELEVVTISGYHDVPEDNEQSFLKALANQPLSVAIEASSRGFQFYSGGIF 232

Query: 294 CPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNV-- 351
             + CG  LDHGV  VGYG+S       K   Y  +KNSWG  WGE GY  I M RNV  
Sbjct: 233 NGH-CGTELDHGVAAVGYGTS-------KGVDYITVKNSWGSKWGEKGY--IRMKRNVGK 282

Query: 352 ----CGVDSMVS 359
               CG+  M S
Sbjct: 283 PEGICGIYKMAS 294


>gi|110737959|dbj|BAF00916.1| cysteine proteinase [Arabidopsis thaliana]
          Length = 376

 Score =  204 bits (520), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 126/342 (36%), Positives = 178/342 (52%), Gaps = 34/342 (9%)

Query: 35  VPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQE----EHDYRFRVFKANLRRAKRRQLL 90
           +PSDG+   D  + +   +  + ++  KT         + D RF +FK NLR        
Sbjct: 33  LPSDGKWRTDEEVRS--IYLQWSAEHGKTNNNNNGIINDQDKRFNIFKDNLRFIDLHNEN 90

Query: 91  DPTAVH--GVTKFSDLTPSEFRRQFLGLN----RRLRLPADAQKAPILPTN--DLPTDFD 142
           +  A +  G+TKF+DLT  E+R+ +LG      RR+    +  +      N  ++P   D
Sbjct: 91  NKNATYKLGLTKFTDLTNDEYRKLYLGARTEPARRIAKAKNVNQKYSAAVNGKEVPETVD 150

Query: 143 WRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESG 202
           WR  GAV  +KDQG CGSCW+FS T A+EG + + TGEL+SLSEQ+LVDCD         
Sbjct: 151 WRQKGAVNPIKDQGTCGSCWAFSTTAAVEGINKIVTGELISLSEQELVDCDK-------- 202

Query: 203 SCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSD 262
           S + GCNGGLM+ AF++I+K GG+  EKDYPY G  G    F K+    ++  +  + + 
Sbjct: 203 SYNQGCNGGLMDYAFQFIMKNGGLNTEKDYPYRGFGGKCNSFLKNSRVVSIDGYEDVPTK 262

Query: 263 EDQMAANLVKHGPLAVGINA--VWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIR 320
           ++      + + P+ V I A     Q Y  G+     CG  LDH V+ VGYGS       
Sbjct: 263 DETALKKAISYQPVRVAIEAGGRIFQHYQSGIFTGS-CGTNLDHAVVAVGYGSENGV--- 318

Query: 321 FKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVA 362
                YWI++NSWG  WGE GY  I M RN+    S    +A
Sbjct: 319 ----DYWIVRNSWGPRWGEEGY--IRMERNLAASKSGKCGIA 354


>gi|33242884|gb|AAQ01146.1| cathepsin [Petromyzon marinus]
          Length = 333

 Score =  204 bits (520), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 121/317 (38%), Positives = 174/317 (54%), Gaps = 26/317 (8%)

Query: 52  HFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLL---DPTAVH-GVTKFSDLTPS 107
            +  +KS + K Y +++E  +R  VF+ NL+R  +  LL      + H G+ K+SDL   
Sbjct: 26  QWDTWKSTYGKHYGSEQEDAHRRDVFEQNLKRVLQHNLLADEGNVSFHLGINKYSDLELH 85

Query: 108 EFRRQFLGLNRRLRLPADAQKAP--ILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFS 165
           E+  + +G    LR     + AP  +   ++LP   DWR  G VT VK+QG CGS W+FS
Sbjct: 86  EYHEKVVGRFWNLRNGTRRRGAPFPLRSMDNLPEQVDWRLKGYVTPVKEQGLCGSSWAFS 145

Query: 166 ATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGG 225
           ATG+LEG HF +TG L SLSEQQLVDC            ++GCNGG    A +YI+   G
Sbjct: 146 ATGSLEGQHFAATGNLTSLSEQQLVDC-------TKSYYNNGCNGGRSERALQYIIDNNG 198

Query: 226 VEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVI--SSDEDQMAANLVKHGPLAVGINAV 283
           ++ E  YPY   D G C+F  + +A   S++  +  SS+E+ +   +   GP+A+ +NA 
Sbjct: 199 IDSELSYPYEHAD-GKCRFKPANVATKCSSYQFVEPSSNEEVLRQAVASVGPIAIAMNAD 257

Query: 284 W--MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENG 341
               + Y  G+     C K  +H +L+VGYGS            +WI+KNSWGE+WGE G
Sbjct: 258 LDTFKHYKSGLFNEPSCDKSPNHAMLVVGYGS-------LSGNDFWIVKNSWGEDWGEKG 310

Query: 342 Y-YKICMGRNVCGVDSM 357
           Y Y I    N CG+ S+
Sbjct: 311 YIYMIRNKDNQCGIASI 327


>gi|30141027|dbj|BAC75927.1| cysteine protease-5 [Helianthus annuus]
          Length = 365

 Score =  204 bits (520), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 126/326 (38%), Positives = 180/326 (55%), Gaps = 39/326 (11%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH-GVTKFSDLTPSEFRR 111
           + L+ ++  KTY    E + RFR+F  NL+      L    +   G+ +F+DLT  E+R 
Sbjct: 36  YELWLARHGKTYNALGEKESRFRIFADNLKFIDEHNLSGNRSYKVGLNQFADLTNEEYRS 95

Query: 112 QFLGLN-RRLRLPADAQKAPI-----LPTNDL-PTDFDWRDHGAVTGVKDQGACGSCWSF 164
            +LG      R  A  Q+  I     +  N++ P   DWR+ GAV+ VK+QG CGSCW+F
Sbjct: 96  MYLGTKVDPYRRIAKMQRGEISRRYAVQENEMFPAKVDWRERGAVSPVKNQGGCGSCWAF 155

Query: 165 SATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAG 224
           S   ++EG + + TG+L+SLSEQ+LVDCD++         +SGCNGG M+ AF++I+  G
Sbjct: 156 STVASVEGINKIVTGDLISLSEQELVDCDNK--------YNSGCNGGSMDYAFQFIVSNG 207

Query: 225 GVEREKDYPYTGTDGGSCK--FDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA 282
           G++ E DYPY G  G  C    +K+KI  ++  +  +    ++     V H P++VGI A
Sbjct: 208 GIDSESDYPYKGV-GAVCDPVRNKAKI-VSIDGYEDVPPMNEKALMKAVAHQPVSVGIEA 265

Query: 283 VW--MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGEN 340
                Q Y  GV     CG  LDHGV++VGYGS          K YWI++NSWG  WGE+
Sbjct: 266 SGRAFQLYTSGVLTGS-CGTNLDHGVVVVGYGSE-------NGKDYWIVRNSWGPEWGED 317

Query: 341 GYYKICMGRN-------VCGVDSMVS 359
           GY  I M RN       +CG+  M S
Sbjct: 318 GY--IRMERNMVDTPVGMCGITLMAS 341


>gi|1706261|sp|Q10717.1|CYSP2_MAIZE RecName: Full=Cysteine proteinase 2; Flags: Precursor
 gi|644490|dbj|BAA08245.1| cysteine proteinase [Zea mays]
          Length = 360

 Score =  204 bits (520), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 136/377 (36%), Positives = 190/377 (50%), Gaps = 54/377 (14%)

Query: 10  LLLLLSSVLASAVAVND----DDAMIRQVVPSDGEQSEDHLLNA------EHHFSLFKSK 59
           L +L   VLA   AV +    D   IR V        E  +  A         F+ F  +
Sbjct: 6   LFVLAVVVLADTAAVVNSGFADSNPIRPVTDRAASALESTVFAALGRTRDALRFARFAVR 65

Query: 60  FSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGL--- 116
           + K+Y +  E   RFR+F  +L+  +       +   G+ +F+D++  EFR   LG    
Sbjct: 66  YGKSYESAAEVHKRFRIFSESLQLVRSTNRKGLSYRLGINRFADMSWEEFRATRLGAAQN 125

Query: 117 -------NRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGA 169
                  N R+R  A A          LP   DWR+ G V+ VK+QG CGSCW+FS TGA
Sbjct: 126 CSATLTGNHRMRAAAVA----------LPETKDWREDGIVSPVKNQGHCGSCWTFSTTGA 175

Query: 170 LEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVERE 229
           LE A+  +TG+ +SLSEQQLVDC    +       + GCNGGL + AFEYI   GG++ E
Sbjct: 176 LEAAYTQATGKPISLSEQQLVDCGFAFN-------NFGCNGGLPSQAFEYIKYNGGLDTE 228

Query: 230 KDYPYTGTDGGSCKFDKSKIAAAV---SNFSVISSDEDQMAANLVKHGPLAVGINAVW-M 285
           + YPY G + G CKF    +   V    N ++ + DE + A  LV+  P++V    +   
Sbjct: 229 ESYPYQGVN-GICKFKNENVGVKVLDSVNITLGAEDELKDAVGLVR--PVSVAFEVITGF 285

Query: 286 QTYIGGVSCPYICGKY---LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGY 342
           + Y  GV     CG     ++H VL VGYG            PYW+IKNSWG +WG+ GY
Sbjct: 286 RLYKSGVYTSDHCGTTPMDVNHAVLAVGYGVE-------DGVPYWLIKNSWGADWGDEGY 338

Query: 343 YKICMGRNVCGVDSMVS 359
           +K+ MG+N+CGV +  S
Sbjct: 339 FKMEMGKNMCGVATCAS 355


>gi|449275508|gb|EMC84350.1| Cathepsin L1, partial [Columba livia]
          Length = 319

 Score =  204 bits (520), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 127/318 (39%), Positives = 171/318 (53%), Gaps = 21/318 (6%)

Query: 52  HFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH----GVTKFSDLTPS 107
           H+ L+KS  +K Y  +EE  +R  V++ NL+  +   L      H    G+ +F D+T  
Sbjct: 9   HWQLWKSWHNKDYHEREE-SWRRVVWEKNLKMIELHNLDHTLGKHSYKLGMNQFGDMTTE 67

Query: 108 EFRRQFLGLNRRLRLPADAQKAPILPTN-DLPTDFDWRDHGAVTGVKDQGACGSCWSFSA 166
           EFR+   G   +           + P+  + P   DWR+ G VT VKDQG CGSCW+FS 
Sbjct: 68  EFRQLMNGYAHKKSERKYRGSQFLEPSFLEAPRSVDWREKGYVTPVKDQGQCGSCWAFST 127

Query: 167 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGV 226
           TGALEG HF  TG+LVSLSEQ LVDC     PE     + GCNGGLM+ AF+Y+   GG+
Sbjct: 128 TGALEGQHFRKTGKLVSLSEQNLVDCSR---PE----GNQGCNGGLMDQAFQYVQDNGGI 180

Query: 227 EREKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVGINA--V 283
           + E+ YPYT  D   C++     AA  + F  +    E  +   +   GP++V I+A   
Sbjct: 181 DSEESYPYTAKDDEDCRYKAEYNAANDTGFVDIPQGHERALMKAVAAVGPVSVAIDAGHS 240

Query: 284 WMQTYIGGVSC-PYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGY 342
             Q Y  G+   P    + LDHGVL+VGY   GF       K YWI+KNSWGE WG+ GY
Sbjct: 241 SFQFYQSGIYYEPDCSSEDLDHGVLVVGY---GFEGEDVDGKKYWIVKNSWGEKWGDKGY 297

Query: 343 YKICMGR-NVCGVDSMVS 359
             +   R N CG+ +  S
Sbjct: 298 IYMAKDRKNHCGIATAAS 315


>gi|116787404|gb|ABK24495.1| unknown [Picea sitchensis]
 gi|224286306|gb|ACN40861.1| unknown [Picea sitchensis]
          Length = 452

 Score =  204 bits (519), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 114/305 (37%), Positives = 169/305 (55%), Gaps = 25/305 (8%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           + L+ ++  + Y   +E   RF VFK N          + +   G+ +F+DL+  EF+  
Sbjct: 42  YELWLAEHKRAYNGLDEKQKRFSVFKDNFLYIHEHNQGNRSYKLGLNQFADLSHEEFKAT 101

Query: 113 FLG----LNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATG 168
           +LG      +RL  P  +++       DLP   DWR+ GAVT VKDQG+CGSCW+FS   
Sbjct: 102 YLGAKLDTKKRLSRPP-SRRYQYSDGEDLPESIDWREKGAVTSVKDQGSCGSCWAFSTVA 160

Query: 169 ALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVER 228
           A+EG + + TG+L+SLSEQ+LVDCD         S + GCNGGLM+ AFE+I+  GG++ 
Sbjct: 161 AVEGINQIVTGDLISLSEQELVDCDT--------SYNQGCNGGLMDYAFEFIINNGGLDS 212

Query: 229 EKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQ 286
           E+DYPYT  DG    + K+     + ++  +  ++++       + P++V I A     Q
Sbjct: 213 EEDYPYTAYDGSCDSYRKNAHVVTIDDYEDVPENDEKSLKKAAANQPISVAIEASGREFQ 272

Query: 287 TYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKIC 346
            Y  GV     CG  LDHGV +VGYGS            YW +KNSWG++WGE G+ +  
Sbjct: 273 FYDSGVFTS-TCGTQLDHGVTLVGYGSE-------SGTDYWTVKNSWGKSWGEEGFIR-- 322

Query: 347 MGRNV 351
           + RN+
Sbjct: 323 LQRNI 327


>gi|346466067|gb|AEO32878.1| hypothetical protein [Amblyomma maculatum]
          Length = 358

 Score =  204 bits (519), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 133/370 (35%), Positives = 191/370 (51%), Gaps = 30/370 (8%)

Query: 3   RLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSK 62
           R + + + L L++ V  + +  N+   ++  +  +    +   L+ AE  +S FK+   K
Sbjct: 2   RPLEALIRLFLVTHVPLNGIWKNEGFVVLGCLFVTAAAITHQELVGAE--WSAFKALHGK 59

Query: 63  TYATQEEHDYRFRVFKANLRRAKR--RQLLDPTAVH--GVTKFSDLTPSEFRRQFLGLNR 118
            Y ++ E  YR +++  N  +  R   +  +  A +   + +F DL   EF     G  R
Sbjct: 60  EYHSETEEYYRLKIYMENRLKIARHNEKYANNKASYKLAMNEFGDLLHHEFVSTRNGFKR 119

Query: 119 RLRLPADAQKAPILPT----NDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAH 174
             R         I P       LP   DWR  GAVT VK+QG CGSCW+FS TG+LEG H
Sbjct: 120 NYRSTPREGSFYIEPEGIEDKHLPKTVDWRKKGAVTPVKNQGQCGSCWAFSTTGSLEGQH 179

Query: 175 FLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPY 234
           F  TG +VSLSEQ LVDC  +         ++GC GGLM++AF+YI   GG++ E  YPY
Sbjct: 180 FRKTGRMVSLSEQNLVDCSGKFG-------NNGCEGGLMDNAFKYIKANGGIDTELSYPY 232

Query: 235 TGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKH-GPLAVGINAVW--MQTYIGG 291
            GTD G C F+KS + A  + F  I    +Q+    V   GP++V I+A     Q Y  G
Sbjct: 233 NGTD-GICHFEKSDVGATDTGFVDIPEGNEQLLKKAVATVGPVSVAIDASHESFQFYSQG 291

Query: 292 V-SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR- 349
           V   P    + LDHGVL+VGYG+          + YW++KNSWG  WG++GY  +   + 
Sbjct: 292 VYDEPECSSESLDHGVLVVGYGTK-------DGQDYWLVKNSWGTTWGDDGYIYMTRNKE 344

Query: 350 NVCGVDSMVS 359
           N CG+ S  S
Sbjct: 345 NQCGIASSAS 354


>gi|74200292|dbj|BAE22939.1| unnamed protein product [Mus musculus]
          Length = 308

 Score =  204 bits (519), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 122/312 (39%), Positives = 168/312 (53%), Gaps = 22/312 (7%)

Query: 56  FKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHG----VTKFSDLTPSEFRR 111
           +KS   + Y T EE ++R  +++ N+R  +          HG    +  F D+T  EFR+
Sbjct: 6   WKSTHRRLYGTNEE-EWRRAIWEKNMRMIQLHNGEYSNGQHGFSMEMNAFGDMTNEEFRQ 64

Query: 112 QFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALE 171
              G   +        + P++    +P   DWR+ G VT VK+QG CGSCW+FSA+G LE
Sbjct: 65  VVNGYRHQKHKKGRLFQEPLMLK--IPKSVDWREKGCVTPVKNQGQCGSCWAFSASGCLE 122

Query: 172 GAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKD 231
           G  FL TG+L+SLSEQ LVDC H          + GCNGGLM+ AF+YI + GG++ E+ 
Sbjct: 123 GQMFLKTGKLISLSEQNLVDCSH-------AQGNQGCNGGLMDFAFQYIKENGGLDSEES 175

Query: 232 YPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYI 289
           YPY   D GSCK+      A  + F  I   E  +   +   GP++V ++A    +Q Y 
Sbjct: 176 YPYEAKD-GSCKYRAEFAVANDTGFVDIPQQEKALMKAVATVGPISVAMDASHPSLQFYS 234

Query: 290 GGVSC-PYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMG 348
            G+   P    K LDHGVL+VGYG  G    + K   YW++KNSWG  WG  GY KI   
Sbjct: 235 SGIYYEPNCSSKNLDHGVLLVGYGYEGTDSNKNK---YWLVKNSWGSEWGMEGYIKIAKD 291

Query: 349 R-NVCGVDSMVS 359
           R N CG+ +  S
Sbjct: 292 RDNHCGLATAAS 303


>gi|330803820|ref|XP_003289900.1| hypothetical protein DICPUDRAFT_80649 [Dictyostelium purpureum]
 gi|325080011|gb|EGC33585.1| hypothetical protein DICPUDRAFT_80649 [Dictyostelium purpureum]
          Length = 328

 Score =  204 bits (519), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 122/317 (38%), Positives = 175/317 (55%), Gaps = 34/317 (10%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           F  +  K  K+Y T +E   R+ +F+ N+    +        + G+   +DLT  E++R 
Sbjct: 32  FQNWMVKHQKSY-TNDEFGSRYTIFQDNMDFVTKWNQKGSDTILGLNSMADLTNQEYQRI 90

Query: 113 FLGLNRRLRLPADAQKAPILPTNDL---PTDFDWRDHGAVTGVKDQGACGSCWSFSATGA 169
           +LG    ++ P       I+   D+   P   DWR +GAVT VK+QG CG C+SFS TG+
Sbjct: 91  YLGTKTTVKKPN-----LIIGVTDVSKAPASVDWRANGAVTAVKNQGQCGGCYSFSTTGS 145

Query: 170 LEGAHFLSTGELVSLSEQQLVDCDHECDPEESGS-CDSGCNGGLMNSAFEYILKAGGVER 228
           +EG H +++ +LVSLSEQQ++DC        SGS  ++GC+GGLM ++FEYI+  GG++ 
Sbjct: 146 VEGIHEITSKQLVSLSEQQILDC--------SGSEGNNGCDGGLMTNSFEYIIAVGGLDT 197

Query: 229 EKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQ 286
           E  YPY G   G CKF+K+ I A ++ +  + S  +      V   P++V I+A     Q
Sbjct: 198 EASYPYEGVV-GKCKFNKANIGATITGYKNVKSGSESDLQTAVAAQPVSVAIDASQNSFQ 256

Query: 287 TYIGGVSC-PYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKI 345
            Y  GV   P      LDHGVL VGYGS          + YWI+KNSWG +WGE G+  I
Sbjct: 257 LYSSGVYYEPACSSTQLDHGVLAVGYGSQ-------SGQDYWIVKNSWGADWGEKGF--I 307

Query: 346 CMGRNV---CGVDSMVS 359
            M RN    CG+ +M S
Sbjct: 308 LMARNKHNNCGIATMAS 324


>gi|237844793|ref|XP_002371694.1| cathepsin L-like thiolproteinase, putative [Toxoplasma gondii ME49]
 gi|50313163|gb|AAT74529.1| toxopain-2 [Toxoplasma gondii]
 gi|89242977|gb|ABD64744.1| cathepsin L [Toxoplasma gondii]
 gi|95007485|emb|CAJ20707.1| toxopain-2 [Toxoplasma gondii RH]
 gi|211969358|gb|EEB04554.1| cathepsin L-like thiolproteinase, putative [Toxoplasma gondii ME49]
 gi|221480879|gb|EEE19300.1| cysteine protease, putative [Toxoplasma gondii GT1]
 gi|221501596|gb|EEE27366.1| cysteine protease, putative [Toxoplasma gondii VEG]
          Length = 422

 Score =  204 bits (519), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 134/362 (37%), Positives = 188/362 (51%), Gaps = 37/362 (10%)

Query: 4   LILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQ--------SEDHLLNAEHHFSL 55
           L+ +++ LL+ +S L       +DD  +    P +  Q         E H  +A   FS 
Sbjct: 65  LVAAAVSLLVFASFLIQWQG--EDDRAVFPPSPVEDHQPPANIWEWKEAHFQDA---FSS 119

Query: 56  FKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLG 115
           F++ ++K+YAT+EE   R+ +FK NL           +    +  F DL+  EFRR++LG
Sbjct: 120 FQAMYAKSYATEEEKQRRYAIFKNNLVYIHTHNQQGYSYSLKMNHFGDLSRDEFRRKYLG 179

Query: 116 LNRRLRLPAD-----AQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGAL 170
             +   L +       +   +LP+ +LP   DWR  G VT VKDQ  CGSCW+FS TGAL
Sbjct: 180 FKKSRNLKSHHLGVATELLNVLPS-ELPAGVDWRSRGCVTPVKDQRDCGSCWAFSTTGAL 238

Query: 171 EGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREK 230
           EGAH   TG+LVSLSEQ+L+DC            +  C+GG MN AF+Y+L +GG+  E 
Sbjct: 239 EGAHCAKTGKLVSLSEQELMDCSR-------AEGNQSCSGGEMNDAFQYVLDSGGICSED 291

Query: 231 DYPYTGTDGGSCKFDKSKIAAAVSNFS-VISSDEDQMAANLVKHGPLAVGINAVWM--QT 287
            YPY   D   C+    +    +  F  V    E  M A L K  P+++ I A  M  Q 
Sbjct: 292 AYPYLARD-EECRAQSCEKVVKILGFKDVPRRSEAAMKAALAK-SPVSIAIEADQMPFQF 349

Query: 288 YIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICM 347
           Y  GV     CG  LDHGVL+VGYG+      +  +K +WI+KNSWG  WG +GY  + M
Sbjct: 350 YHEGV-FDASCGTDLDHGVLLVGYGTD-----KESKKDFWIMKNSWGTGWGRDGYMYMAM 403

Query: 348 GR 349
            +
Sbjct: 404 HK 405


>gi|110349475|gb|ABG73218.1| cathepsin L 2 precursor [Diaprepes abbreviatus]
          Length = 348

 Score =  204 bits (519), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 130/336 (38%), Positives = 171/336 (50%), Gaps = 40/336 (11%)

Query: 49  AEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH----GVTKFSDL 104
            +  +  FK +  K Y ++ E++YR  VF  NL +      L    +      +    DL
Sbjct: 24  VQEQWEQFKLEHGKVYESESENEYRQSVFMENLFQINEHNKLYEMGLSSYQMAMNHLGDL 83

Query: 105 TPSEFRRQF------LGLNRRLR-------LPADAQK--APILPTN----DLPTDFDWRD 145
           T  EF R +      L  +  L        LP D Q      LPTN    DLPTD DWR 
Sbjct: 84  TKDEFMRIYTVNMPQLPQSENLSDSEPWLDLPQDLQGFVTYALPTNLDEVDLPTDIDWRQ 143

Query: 146 HGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCD 205
            GAVT VK+Q  CGSCWSFSATGALE   F  T +L+SLSEQQLVDC            +
Sbjct: 144 KGAVTPVKNQRNCGSCWSFSATGALEAQWFKKTNKLISLSEQQLVDCSGRYG-------N 196

Query: 206 SGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQ 265
            GC+GG M+ AF YI + GG++ E+ YPYT  D G C +     AA VS   ++   E+Q
Sbjct: 197 HGCHGGWMHWAFGYIKENGGIDTEQSYPYTAKD-GRCAYKPGNKAATVSQVIMVPRGENQ 255

Query: 266 MAANLVKHGPLAVGINAVW-MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEK 324
           +AA +   GP+++        Q Y  GV     CG  L+H +L VGYGS G        K
Sbjct: 256 LAAKVSSVGPISIAAEVSHKFQFYHSGVYDEPQCGHSLNHAMLAVGYGSMG-------GK 308

Query: 325 PYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVS 359
            +W++KNSWG  WG+ GY ++   + N CG+  M S
Sbjct: 309 NFWLVKNSWGTGWGDQGYIRMAKDKNNQCGIALMAS 344


>gi|302812789|ref|XP_002988081.1| hypothetical protein SELMODRAFT_183539 [Selaginella moellendorffii]
 gi|300144187|gb|EFJ10873.1| hypothetical protein SELMODRAFT_183539 [Selaginella moellendorffii]
          Length = 425

 Score =  204 bits (519), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 125/335 (37%), Positives = 182/335 (54%), Gaps = 38/335 (11%)

Query: 42  SEDHLLNAEHHFSLFKSKFSKTYATQEE-HDYRFRVFKANLRRAKRRQLLDPTAVH-GVT 99
           S D  L+ E  ++ + +KF K  A+     D+RF  FK N R  +        +   G+ 
Sbjct: 4   SSDSDLSGE--YASWCAKFGKECASSNSLGDHRFETFKENFRYIEEHNRAGKHSYRLGLN 61

Query: 100 KFSDLTPSEFRRQFLGLNRRL------RLPADAQKAPILPTNDLPTDFDWRDHGAVTGVK 153
           +FSDLT  EFR++FLGL   L      ++P D+         DLP   DWR HGAVT  K
Sbjct: 62  QFSDLTSEEFRQRFLGLRPDLIDSPVLKMPRDSDIEEGFQNVDLPASVDWRQHGAVTAPK 121

Query: 154 DQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLM 213
           DQG+CG CW+F+ TGA+EG + + TG+LVSLSEQ+L+DCD +         D GC+GGLM
Sbjct: 122 DQGSCGGCWAFATTGAIEGINQIVTGQLVSLSEQELIDCDKK--------ADKGCDGGLM 173

Query: 214 NSAFEYILKAGGVEREKDYPYTGTDGGSCKFDK-SKIAAAVSNFSVISSDEDQMAANLVK 272
            +A+++I++ GG++ E DYPY  ++   C   K +    A+  +  I   ++Q     V 
Sbjct: 174 ENAYQFIVENGGLDTETDYPYHASE-SHCNMKKLNSRVVAIDGYKAIPEGDEQALLLAVA 232

Query: 273 HGPLAVGINAVW--MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIK 330
             P++V I       Q Y  GV   + CG+ ++HGVLIVGYG+            YWI+K
Sbjct: 233 KQPVSVAIEGASKDFQHYASGVFTGH-CGEEINHGVLIVGYGTE-------DGLDYWIVK 284

Query: 331 NSWGENWGENGYYKICMGRN------VCGVDSMVS 359
           NSW   WG+ G+ K  M RN      +C ++++ S
Sbjct: 285 NSWAATWGDGGFVK--MQRNTGKRGGLCSINTLAS 317


>gi|146215982|gb|ABQ10193.1| actinidin Act2b [Actinidia eriantha]
          Length = 378

 Score =  204 bits (519), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 124/360 (34%), Positives = 191/360 (53%), Gaps = 38/360 (10%)

Query: 8   SLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQ 67
           S+ LL  S++L  ++A++ ++++ R         + D ++     +  +  +  K+Y + 
Sbjct: 9   SMSLLFFSTLLILSLALDIENSVQR---------TNDQVM---AMYESWLVEQGKSYNSL 56

Query: 68  EEHDYRFRVFKANLRRAKRRQL-LDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADA 126
           +E + RF +FK NLR         + +   G+ +F+DLT  E+R  +LGL    +     
Sbjct: 57  DEKEMRFEIFKENLRIIDDHNADANRSYSLGLNRFADLTDEEYRSTYLGLKMGPKTDVSN 116

Query: 127 QKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSE 186
           +  P +    LP   DWR  GAV GVK+QG C SCW+FSA  A+EG + + TG L+SLSE
Sbjct: 117 EYMPKV-GEALPDYVDWRTVGAVVGVKNQGLCSSCWAFSAVTAVEGINKIVTGNLISLSE 175

Query: 187 QQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDK 246
           Q+LVDC      +       GCN GLM  AF++I+  GG+  E +YPYT  DG      K
Sbjct: 176 QELVDCGRTQRTK-------GCNRGLMTDAFQFIINNGGINTEDNYPYTAKDGQCNLSLK 228

Query: 247 SKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKYLDH 304
           ++    + N+  + S+ +      V + P++VG+ +     + Y  G+   + CG  +DH
Sbjct: 229 NQKYVTIDNYKNVPSNNEMALKKAVAYQPVSVGVESEGGKFKLYTSGIFTGF-CGTAVDH 287

Query: 305 GVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNV-----CGVDSMVS 359
           GV IVGYG+        +   YWI+KNSWG NWGENGY +I   RN+     CG+  M S
Sbjct: 288 GVTIVGYGTE-------RGMDYWIVKNSWGTNWGENGYIRI--QRNIGGAGKCGIARMPS 338


>gi|255032|gb|AAB23155.1| COT44=cysteine proteinase homolog [Brassica napus, seedling, rapid
           cycling base population CrGC5, Peptide, 328 aa]
          Length = 328

 Score =  204 bits (519), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 120/302 (39%), Positives = 162/302 (53%), Gaps = 34/302 (11%)

Query: 69  EHDYRFRVFKANLRRAKRRQLLDPTAVH--GVTKFSDLTPSEFRRQFLGLN----RRLRL 122
           + D RF +FK NLR        +  A +  G+T F++LT  E+R  +LG      RR+  
Sbjct: 24  QQDERFNIFKDNLRFIDLHNENNKNATYKLGLTIFANLTNDEYRSLYLGARTEPVRRITK 83

Query: 123 PADAQKAPILPTNDL--PTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGE 180
             +         ND+  P   DWR  GAV  +KDQG CGSCW+FS   A+EG + + TGE
Sbjct: 84  AKNVNMKYSAAVNDVEVPVTVDWRQKGAVNAIKDQGTCGSCWAFSTAAAVEGINKIVTGE 143

Query: 181 LVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGG 240
           LVSLSEQ+LVDCD         S + GCNGGLM+ AF++I+K GG+  EKDYPY GT+G 
Sbjct: 144 LVSLSEQELVDCDK--------SYNQGCNGGLMDYAFQFIMKNGGLNTEKDYPYHGTNGK 195

Query: 241 SCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSCPYIC 298
                K+     +  +  + S ++      V + P++V I+A     Q Y  G+     C
Sbjct: 196 CNSLLKNSRVVTIDGYEDVPSKDETALKRAVSYQPVSVAIDAGGRAFQHYQSGIFTGK-C 254

Query: 299 GKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNV------C 352
           G  +DH V+ VGYGS            YWI++NSWG  WGE+GY  I M RNV      C
Sbjct: 255 GTNMDHAVVAVGYGSENGV-------DYWIVRNSWGTRWGEDGY--IRMERNVASKSGKC 305

Query: 353 GV 354
           G+
Sbjct: 306 GI 307


>gi|363814535|ref|NP_001242660.1| uncharacterized protein LOC100807362 precursor [Glycine max]
 gi|255636658|gb|ACU18666.1| unknown [Glycine max]
          Length = 367

 Score =  204 bits (519), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 122/355 (34%), Positives = 193/355 (54%), Gaps = 32/355 (9%)

Query: 6   LSSLLLLLLSSVLASAVAVNDDDAMI---RQVVPSDGEQSEDHLLNAEHHFSLFKSKFSK 62
           L + +L++L +VLA + A+  D ++I   R      G +S++ +++    + +   K  K
Sbjct: 7   LMATILIVLFTVLAVSSAL--DMSIISYDRSHADKSGWKSDEEVMSIYEEWLV---KHGK 61

Query: 63  TYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLN---RR 119
            Y   EE + RF++FK NL   +    ++ T   G+ +FSDL+  E+R ++LG      R
Sbjct: 62  VYNAVEEKEKRFQIFKDNLNFIEEHNAVNRTYKVGLNRFSDLSNEEYRSKYLGTKIDPSR 121

Query: 120 LRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTG 179
           +      + +P +  N LP   DWR  GAV  VK+Q  C  CW+FSA  A+EG + + TG
Sbjct: 122 MMARPSRRYSPRVADN-LPESVDWRKEGAVVRVKNQSECEGCWAFSAIAAVEGINKIVTG 180

Query: 180 ELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDG 239
            L +LSEQ+L+DCD         + ++GC+GGL++ AFE+I+  GG++ E+DYP+ G DG
Sbjct: 181 NLTALSEQELLDCDR--------TVNAGCSGGLVDYAFEFIINNGGIDTEEDYPFQGADG 232

Query: 240 GSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYI 297
              ++  +  A  +  +  + + ++      V + P++V I A     Q Y  G+     
Sbjct: 233 ICDQYKINARAVTIDGYERVPAYDELALKKAVANQPVSVAIEAYGKEFQLYESGIFTG-T 291

Query: 298 CGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVC 352
           CG  +DHGV  VGYG+            YWI+KNSWGENWGE GY  + M RN+ 
Sbjct: 292 CGTSIDHGVTAVGYGTENGI-------DYWIVKNSWGENWGEAGY--VGMERNIA 337


>gi|74927078|sp|Q86GF7.1|CRUST_PANBO RecName: Full=Crustapain; AltName: Full=NsCys; Flags: Precursor
 gi|28971811|dbj|BAC65417.1| crustapain [Pandalus borealis]
          Length = 323

 Score =  204 bits (519), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 129/312 (41%), Positives = 163/312 (52%), Gaps = 33/312 (10%)

Query: 56  FKSKFSKTYATQEEHDYRFRVFKANLR----RAKRRQLLDPTAVHGVTKFSDLTPSEFRR 111
           FK+KF K YA  EE  +R  VF   L+      +R    + T    +  FSDLT  E   
Sbjct: 23  FKTKFGKKYANSEEESHRMSVFMDKLKFIQEHNERYDKGEVTYWLKINNFSDLTHEEVLA 82

Query: 112 QFLGLNRRLR----LPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSAT 167
              G+ RR      LP  A      PT  +  D DWR+ GAVT VKDQG CGSCW+FSA 
Sbjct: 83  TKTGMTRRRHPLSVLPKSA------PTTPMAADVDWRNKGAVTPVKDQGQCGSCWAFSAV 136

Query: 168 GALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVE 227
            ALEGAHFL TG+LVSLSEQ LVDC        S   + GCNGG    A++YI+   G++
Sbjct: 137 AALEGAHFLKTGDLVSLSEQNLVDC-------SSSYGNQGCNGGWPYQAYQYIIANRGID 189

Query: 228 REKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVGINA--VW 284
            E  YPY   D  +C++D   I A VS++    S DE  +   +   GP++V I+A    
Sbjct: 190 TESSYPYKAID-DNCRYDAGNIGATVSSYVEPASGDESALQHAVQNEGPVSVCIDAGQSS 248

Query: 285 MQTYIGGVSCPYICGK-YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYY 343
             +Y GGV     C   Y +H V  VGYG+            YWI+KNSWG  WGE+GY 
Sbjct: 249 FGSYGGGVYYEPNCDSWYANHAVTAVGYGTDA------NGGDYWIVKNSWGAWWGESGYI 302

Query: 344 KICMGR-NVCGV 354
           K+   R N C +
Sbjct: 303 KMARNRDNNCAI 314


>gi|41688064|dbj|BAD08618.1| cathepsin L preproprotein [Cyprinus carpio]
          Length = 337

 Score =  204 bits (519), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 129/325 (39%), Positives = 174/325 (53%), Gaps = 32/325 (9%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH----GVTKFSDLT 105
           ++H+  +K+   K Y  +EE  +R  V++ NL++ +   L      H    G+ +F D+T
Sbjct: 26  DNHWEQWKNWHGKKYHEKEE-GWRRMVWEKNLQKIELHNLEHSMGTHTYRLGMNRFGDMT 84

Query: 106 PSEFRRQFLGLN----RRLRLPADAQKAPILPTN--DLPTDFDWRDHGAVTGVKDQGACG 159
             EFR+   G      RR R       +  +  N  ++P   DWR+ G VT VKDQG CG
Sbjct: 85  HEEFRQVMNGYKHKKERRFR------GSLFMEPNFLEVPNSLDWREKGYVTPVKDQGECG 138

Query: 160 SCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEY 219
           SCW+FS TGA+EG  F  TG+LVSLSEQ LVDC     PE     + GCNGGLM+ AF+Y
Sbjct: 139 SCWAFSTTGAMEGQMFRKTGKLVSLSEQNLVDCSR---PE----GNEGCNGGLMDQAFQY 191

Query: 220 ILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAV 278
           I    G++ E+ YPY GTD   C +D    AA  + F  + S  E  +   +   GP++V
Sbjct: 192 IKDQNGLDSEESYPYVGTDDQPCHYDPKYSAANDTGFVDIPSGKEHALMKAIAAVGPVSV 251

Query: 279 GINA--VWMQTYIGGVSCPYIC-GKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGE 335
            I+A     Q Y  G+     C  + LDHGVL VGY   GF       K YWI+KNSW E
Sbjct: 252 AIDAGHESFQFYQSGIYYEKECSSEELDHGVLAVGY---GFEGEDVDGKKYWIVKNSWSE 308

Query: 336 NWGENGYYKICMGR-NVCGVDSMVS 359
           NWG+ GY  +   R N CG+ +  S
Sbjct: 309 NWGDKGYVYMAKDRHNHCGIATAAS 333


>gi|357465603|ref|XP_003603086.1| Cysteine proteinase [Medicago truncatula]
 gi|355492134|gb|AES73337.1| Cysteine proteinase [Medicago truncatula]
          Length = 474

 Score =  204 bits (519), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 121/355 (34%), Positives = 187/355 (52%), Gaps = 29/355 (8%)

Query: 7   SSLLLLLLSSVLASAVAVNDDDAMIRQVVPSD--GEQSEDHLLNAEHHFSLFKSKFSKTY 64
           S +L++L+   L +A    D   +      SD    +S+  + N    + +   K +   
Sbjct: 8   SPMLVILIVFTLFTATFALDMSIISYDKTHSDKSSRRSDKEVKNIYEEWRVKHGKLNNNI 67

Query: 65  ATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLN------R 118
              E+ D RF +FK NL+        + T   G+ +F+DL+  E+R ++LG         
Sbjct: 68  DGSEK-DKRFEIFKDNLKFIDEHNAENRTYKVGLNRFADLSNEEYRSRYLGTKIDPIGMM 126

Query: 119 RLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLST 178
             R    + +      + LP   DWR  GAV  VKDQG+CGSCW+FS   A+EG + + T
Sbjct: 127 MARTKTRSNRYAPSVGDKLPKSVDWRSQGAVVQVKDQGSCGSCWAFSTIAAVEGINKIVT 186

Query: 179 GELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTD 238
           GELVSLSEQ+LVDCD         + ++GC+GGLM  AFE+I+  GG++ ++DYPY G D
Sbjct: 187 GELVSLSEQELVDCDR--------TVNAGCDGGLMEYAFEFIINNGGIDSDEDYPYRGVD 238

Query: 239 GGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSCPY 296
           G   ++ K+    ++ ++  + + ++      V + P++V I A     Q Y+ G+    
Sbjct: 239 GKCDQYKKNARVVSIDDYEQVPAYDELALKKAVANQPISVAIEAGGREFQLYVSGIFTGK 298

Query: 297 ICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNV 351
            CG  LDHGV  VGYG+            YWI++NSWG++WGE+GY +  M RN+
Sbjct: 299 -CGTALDHGVTAVGYGTENGV-------DYWIVRNSWGKSWGESGYVR--MERNL 343


>gi|37994576|gb|AAH60335.1| Unknown (protein for MGC:68554) [Xenopus laevis]
          Length = 335

 Score =  204 bits (519), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 125/320 (39%), Positives = 172/320 (53%), Gaps = 24/320 (7%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH----GVTKFSDLT 105
           ++H+  +K    KTYA +EE  +R  +++ NL+  +   L      H    G+ +F D+T
Sbjct: 26  DNHWYSWKDWHKKTYAPKEE-GWRRVLWEKNLKMIEFHNLDHSLGKHSYRLGMNQFGDMT 84

Query: 106 PSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFS 165
             EF++   G   +  +      AP     + P   DWR  G VT VKDQG CGSCW+FS
Sbjct: 85  NEEFKQLMNGYKNQKMIRGSTFLAP--NNFEAPKSVDWRKKGYVTPVKDQGQCGSCWAFS 142

Query: 166 ATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGG 225
            TGALEG H+  T +L+SLSEQ LVDC            + GCNGGLM+ AF+Y+   GG
Sbjct: 143 TTGALEGQHYRKTSKLISLSEQNLVDC-------SRAQGNEGCNGGLMDQAFQYVKDNGG 195

Query: 226 VEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISS--DEDQMAANLVKHGPLAVGINA- 282
           ++ E  YPYT  D   C +D +  +A  + F  + S  ++D M A +   GP++V I+A 
Sbjct: 196 IDSEDSYPYTAKDDQECHYDPNNNSANDTGFVDVQSGCEKDLMKA-VASVGPVSVAIDAG 254

Query: 283 -VWMQTYIGGVSC-PYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGEN 340
               Q Y  G+   P    + LDHGVL+VGY   GF       K YWI+KNSW E WG+N
Sbjct: 255 HQSFQFYQSGIYYEPECSSEDLDHGVLVVGY---GFESEDVDGKKYWIVKNSWSEKWGDN 311

Query: 341 GYYKICMGR-NVCGVDSMVS 359
           GY  I   R N CG+ +  S
Sbjct: 312 GYINIAKDRHNHCGIATAAS 331


>gi|47779249|gb|AAT38521.1| cysteine protease [Bombyx mori NPV]
          Length = 323

 Score =  204 bits (519), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 115/325 (35%), Positives = 179/325 (55%), Gaps = 29/325 (8%)

Query: 47  LNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTP 106
           L A ++F  F  +F+K Y+++ E   RF++F+ NL     +   D +A + + KFSDL+ 
Sbjct: 22  LKAPNYFEEFVHRFNKNYSSEVEKLRRFKIFQHNLNEIINKNQND-SAKYEINKFSDLSK 80

Query: 107 SEFRRQFLGLNRRLRLPADAQ---KAPIL--PTNDLPTDFDWRDHGAVTGVKDQGACGSC 161
            E   ++ GL+    LP   Q   K  +L  P    P +FDWR    VT VK+QG CG+C
Sbjct: 81  DETIAKYTGLS----LPTQTQNFCKVILLDQPPGKGPLEFDWRRLNKVTSVKNQGMCGAC 136

Query: 162 WSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYIL 221
           W+F+  G+LE    +   EL++LSEQQ++DCD           D+GCNGGL+++AFE   
Sbjct: 137 WAFATLGSLESQFAIKHNELINLSEQQMIDCDF---------VDAGCNGGLLHTAFEANC 187

Query: 222 KAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVGI 280
           + GGV+ E DYPY   D  +C+ + +K    V + +  I   E+++   L   GP+ + I
Sbjct: 188 RMGGVQLESDYPYEA-DNNNCRMNSNKFLVQVKDCYRYIIVYEEKLKDLLRLVGPIPMAI 246

Query: 281 NAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGEN 340
           +A  +  Y  G+   Y     L+H VL+VGYG            PYW  KN+WG +WGE+
Sbjct: 247 DAADIVNYKQGI-IKYCFNSGLNHAVLLVGYGVEN-------NIPYWTFKNTWGTDWGED 298

Query: 341 GYYKICMGRNVCGVDSMVSSVAAIH 365
           G++++    N CG+ + ++S A I+
Sbjct: 299 GFFRVQQNINACGMRNELASTAVIY 323


>gi|432936690|ref|XP_004082231.1| PREDICTED: cathepsin L-like [Oryzias latipes]
          Length = 334

 Score =  204 bits (518), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 126/322 (39%), Positives = 172/322 (53%), Gaps = 30/322 (9%)

Query: 52  HFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH----GVTKFSDLTPS 107
            F  ++ KF +TY++  E   R + +  N +      +L    +     G+T F+D+   
Sbjct: 25  EFHAWRLKFGRTYSSPTEEAQRRQTWLNNRKLVLVHNILADQGIKSYRLGMTYFADMENE 84

Query: 108 EFRRQF----LGLNRRLRLPADAQKAPILPTN-DLPTDFDWRDHGAVTGVKDQGACGSCW 162
           E++R      LG +    LP        LP N DLP   DWRD G VT VKDQ  CGSCW
Sbjct: 85  EYKRLISQGCLG-SFNASLPRRGSTFFRLPENKDLPAAVDWRDKGYVTDVKDQKQCGSCW 143

Query: 163 SFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK 222
           +FSATG+LEG  F  TG+LVSLSEQQLVDC  +         + GC GGLM+ AF YI  
Sbjct: 144 AFSATGSLEGQTFRKTGKLVSLSEQQLVDCSGDYG-------NMGCGGGLMDDAFRYIQA 196

Query: 223 AGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISS-DEDQMAANLVKHGPLAVGIN 281
            GG++ E+ YPY   D G C++    + A  + +  +SS DED +   +   GP++VGI+
Sbjct: 197 TGGIDTEESYPYEAED-GECRYKPDAVGATCTGYVDVSSGDEDALQEAVATIGPISVGID 255

Query: 282 A--VWMQTYIGGV-SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWG 338
           A  +  Q Y  G+   P      LDHGVL VGYGS          + YW++KNSWG  WG
Sbjct: 256 ASHISFQLYESGLYDEPQCSSSELDHGVLAVGYGSE-------NGQDYWLVKNSWGLTWG 308

Query: 339 ENGYYKICMGR-NVCGVDSMVS 359
           + GY K+   + N CG+ +  S
Sbjct: 309 DQGYIKMSKNKSNQCGIATAAS 330


>gi|6630972|gb|AAF19630.1|AF194426_1 cysteine proteinase precursor [Myxine glutinosa]
          Length = 324

 Score =  204 bits (518), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 127/317 (40%), Positives = 172/317 (54%), Gaps = 33/317 (10%)

Query: 56  FKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH----GVTKFSDLTPSEFRR 111
           +K K+ K+Y  + E   R RV+++NL+  ++  +L          G+  ++DL    +  
Sbjct: 22  WKGKYGKSYLGRGEEVLRKRVWESNLQIVQQHNVLADQGQANYRLGMNTYADL----YNE 77

Query: 112 QFLGLN-----RRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSA 166
           +F+ L       + +  +  Q    L    LP+  DWR+ G VT VKDQG CGSCWSFSA
Sbjct: 78  EFMALKGSSGILQAKDQSSTQTFKPLVGVTLPSSVDWRNQGYVTPVKDQGQCGSCWSFSA 137

Query: 167 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGV 226
           TG+LEG HF  TG LVSLSEQQLVDC            + GC+GGLM SA++YI  AGGV
Sbjct: 138 TGSLEGQHFAKTGTLVSLSEQQLVDCSWSYG-------NYGCSGGLMESAYDYIRDAGGV 190

Query: 227 EREKDYPYTGTDGGSCKFDKSK-IAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW- 284
           + E  YPYT  + G C FD+SK +A    + ++ S DE  +   +   GP+AV I+A   
Sbjct: 191 QLESAYPYTAQN-GRCHFDQSKAVATCTGHVAIPSGDEQSLMQAVGTVGPVAVAIDASGY 249

Query: 285 -MQTYIGGVSCPYIC-GKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGY 342
             Q Y  GV     C    LDHGVL  GYG+ G          YW++KNSWG  WG  GY
Sbjct: 250 DFQLYESGVYDRSRCSSSSLDHGVLAAGYGTEG-------GNDYWLVKNSWGPGWGAQGY 302

Query: 343 YKICMGR-NVCGVDSMV 358
            K+   + N CG+ +M 
Sbjct: 303 IKMSRNKSNQCGIATMA 319


>gi|90399361|emb|CAJ86180.1| H0212B02.7 [Oryza sativa Indica Group]
          Length = 470

 Score =  204 bits (518), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 122/336 (36%), Positives = 176/336 (52%), Gaps = 40/336 (11%)

Query: 35  VPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTA 94
           + S GE+SE+    A   ++ +K++  K Y    E + R+  F+ NLR            
Sbjct: 25  IVSYGERSEEE---ARRLYAEWKAEHGKNYNAVGEEERRYAAFRDNLRYIDEHNAAADAG 81

Query: 95  VH----GVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTND-LPTDFDWRDHGAV 149
           VH    G+ +F+DLT  E+R  +LGL  + R         +   N+ LP   DWR  GAV
Sbjct: 82  VHSFRLGLNRFADLTNEEYRDTYLGLRNKPRRERKVSDRYLAADNEALPESVDWRTKGAV 141

Query: 150 TGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCN 209
             +KDQG CGSCW+FSA  A+EG + + TG+L+SLSEQ+LVDCD         S + GCN
Sbjct: 142 AEIKDQGGCGSCWAFSAIAAVEGINQIVTGDLISLSEQELVDCDT--------SYNEGCN 193

Query: 210 GGLMNSAFEYILKAGGVEREKDYPYTGTDG------------GSCKFDKSKIAAAVSNFS 257
           GGLM+ AF++I+  GG++ E DYPY G D                 F K+     + ++ 
Sbjct: 194 GGLMDYAFDFIINNGGIDTEDDYPYKGKDERCDVNRVSFVFFAPLVFQKNAKVVTIDSYE 253

Query: 258 VISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSG 315
            ++ + +      V + P++V I A     Q Y  G+     CG  LDHGV  VGYG+  
Sbjct: 254 DVTPNSETSLQKAVANQPVSVAIEAGGRAFQLYSSGIFTG-KCGTALDHGVAAVGYGTE- 311

Query: 316 FAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNV 351
                   K YWI++NSWG++WGE+GY +  M RN+
Sbjct: 312 ------NGKDYWIVRNSWGKSWGESGYVR--MERNI 339


>gi|196002275|ref|XP_002111005.1| expressed hypothetical protein [Trichoplax adhaerens]
 gi|190586956|gb|EDV27009.1| expressed hypothetical protein [Trichoplax adhaerens]
          Length = 325

 Score =  204 bits (518), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 118/310 (38%), Positives = 165/310 (53%), Gaps = 22/310 (7%)

Query: 56  FKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLG 115
           +KS   K Y  Q E D+R  VF  N++          T    + +FSDLT  EF + + G
Sbjct: 28  WKSFHGKKYHNQGEDDFRHYVFLQNIKTIAAHNA-KSTFKMAINEFSDLTRKEFVKTYNG 86

Query: 116 LNRRLRLPADAQKAPILPTN-DLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAH 174
               ++   +     + P N ++PT+ DWR  G VT +K+QG CGSCW+FS TG+LEG H
Sbjct: 87  YRLSMKKSTNKPSTFMAPLNTNMPTEVDWRKEGYVTPIKNQGRCGSCWAFSTTGSLEGQH 146

Query: 175 FLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPY 234
           F  TG+LVSLSEQ L+DC        +   + GC GG M+ AFEYI    G++ E  YPY
Sbjct: 147 FRKTGKLVSLSEQNLIDC-------SAAEGNDGCGGGFMDDAFEYIKLNNGIDTEASYPY 199

Query: 235 TGTDGGSCKFDKSKIAAAVSNFSVISS-DEDQMAANLVKHGPLAVGINA---VWMQTYIG 290
            G D   C++ K+   A  + +  I    ED + A +   GP++V I+A    +   + G
Sbjct: 200 EGRD-DICRYKKTNKGAIDTGYMDIKQYSEDDLKAAVATVGPISVAIDASHKSFHMYHTG 258

Query: 291 GVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR- 349
               P      LDHGVL+VGYG+          + YW++KNSWG +WG NGY K+   R 
Sbjct: 259 VYHEPECSQTVLDHGVLVVGYGTE-------NGEDYWLVKNSWGTDWGMNGYIKMSRNRS 311

Query: 350 NVCGVDSMVS 359
           N CG+ +  S
Sbjct: 312 NNCGIATNAS 321


>gi|147790682|emb|CAN61026.1| hypothetical protein VITISV_001146 [Vitis vinifera]
          Length = 469

 Score =  204 bits (518), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 112/298 (37%), Positives = 163/298 (54%), Gaps = 21/298 (7%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           +  + +K  K+Y    E + RF++FK NLR        + T   G+ +F+DLT  E+R  
Sbjct: 53  YEAWLAKHGKSYNALGEKERRFQIFKDNLRFIDEHNAENRTYKVGLNRFADLTNEEYRSM 112

Query: 113 FLGLN---RRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGA 169
           +LG     +R      + +      + LP   DWR  GAV  VKDQG+CGSCW+FS   A
Sbjct: 113 YLGTRTAAKRRSSNKISDRYAFRVGDSLPESVDWRKKGAVVEVKDQGSCGSCWAFSTIAA 172

Query: 170 LEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVERE 229
           +EG + + TG L+SLSEQ+LVDCD         S + GCNGGLM+ AFE+I+  GG++ E
Sbjct: 173 VEGINKIVTGGLISLSEQELVDCDT--------SYNEGCNGGLMDYAFEFIINNGGIDSE 224

Query: 230 KDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQT 287
           +DYPY  +DG   ++ K+     +  +  +  ++++     V + P++V I A     Q 
Sbjct: 225 EDYPYKASDGRCDQYRKNAXVVTIDGYEDVPENDEKSLEKAVANQPVSVAIEAGGREFQL 284

Query: 288 YIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKI 345
           Y  G+     CG  LDHGV  VGYG+            YWI+KNSWG +WGE GY ++
Sbjct: 285 YQSGIFTGR-CGTALDHGVTAVGYGTENGV-------DYWIVKNSWGASWGEEGYIRM 334


>gi|443724292|gb|ELU12369.1| hypothetical protein CAPTEDRAFT_165495 [Capitella teleta]
          Length = 351

 Score =  204 bits (518), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 123/318 (38%), Positives = 172/318 (54%), Gaps = 31/318 (9%)

Query: 56  FKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH----GVTKFSDLTPSEFRR 111
           FK+   + Y   EE   R  VF+ NL++ +    L          G+ +F+D+   EF  
Sbjct: 47  FKTVHERNYGETEEMQ-RKEVFRNNLKKIEMHNYLHSQGKSSYRMGINQFADMEVKEFAS 105

Query: 112 QFLG--LNRRLRLPADAQK---APILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSA 166
              G  +N R ++         +P +P + LP + DWR  G VT +KDQG CGSCWSFS 
Sbjct: 106 VVNGFRMNNRTKVRDHLHSHYISPAIPVS-LPAEVDWRKEGYVTPIKDQGHCGSCWSFST 164

Query: 167 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGV 226
           TGALEG HF  TG+LVSLSEQ L+DC        +   ++GCNGG+M+ AF+YI    G 
Sbjct: 165 TGALEGQHFRKTGKLVSLSEQNLIDC-------STSYGNNGCNGGVMDYAFQYIKDNDGD 217

Query: 227 EREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVI-SSDEDQMAANLVKHGPLAVGINA--V 283
           + E  YPY   D G C+F K  + A  + ++ +   DE++M   +   GP++V I+A   
Sbjct: 218 DTEDSYPYEAAD-GPCRFKKEYVGATDTGYTDLPKGDEEKMKEAVAMVGPVSVAIDASHT 276

Query: 284 WMQTYIGGVSCPYICG-KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGY 342
             Q Y  GV     C  + LDHGVL+VGYG+          + YW++KNSWG  WG+ GY
Sbjct: 277 SFQMYQSGVYDEVECDPEGLDHGVLVVGYGTE-------LGQDYWLVKNSWGTKWGDEGY 329

Query: 343 YKICMGR-NVCGVDSMVS 359
            K+   + N CG+ SM S
Sbjct: 330 IKMSRNKNNQCGISSMAS 347


>gi|242020003|ref|XP_002430447.1| Cathepsin L precursor, putative [Pediculus humanus corporis]
 gi|212515585|gb|EEB17709.1| Cathepsin L precursor, putative [Pediculus humanus corporis]
          Length = 345

 Score =  204 bits (518), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 126/328 (38%), Positives = 178/328 (54%), Gaps = 34/328 (10%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRR----QLLDPTAVHGVTKFSDLTPSE 108
           + LFK++  K Y    E  +R ++F  N ++  +     Q  +     G+ K+SD+   E
Sbjct: 27  WQLFKAEHKKNYNNDVEEKFRMKIFMDNKQKITKHNTKYQRGEVGYKLGLNKYSDMLHHE 86

Query: 109 FRRQFLGLNRRLRLP---ADAQKAP------ILPTN-DLPTDFDWRDHGAVTGVKDQGAC 158
           F   F G N+ +  P   ++  K        I P N  LP   DW   GAVT VKDQG C
Sbjct: 87  FINTFNGFNKSIIPPHLRSNNGKTHLKGSFFIPPANVKLPKHVDWVKLGAVTPVKDQGHC 146

Query: 159 GSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFE 218
           GSCW+FSATGALEG HF  T  LVSLSEQ L+DC  E         ++GCNGGLM+ AF+
Sbjct: 147 GSCWAFSATGALEGLHFRKTKVLVSLSEQNLIDCSTE-------EGNNGCNGGLMDQAFQ 199

Query: 219 YILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFS-VISSDEDQMAANLVKHGPLA 277
           Y+   GG++ E+ YPY G +   C+++     A  + ++ V   DED + + +   GP++
Sbjct: 200 YVRINGGIDTERSYPYEGNN-DVCRYEPENSGAIDTGYTDVPLGDEDALKSAVATVGPVS 258

Query: 278 VGINAVW--MQTYIGGVSCPYICG---KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNS 332
           V I+A     Q Y  GV     C    + LDHGVL+VGYG+         ++ YW++KNS
Sbjct: 259 VAIDASQESFQLYSSGVYFEPNCKNEPESLDHGVLVVGYGTD-----EETQQDYWLVKNS 313

Query: 333 WGENWGENGYYKICM-GRNVCGVDSMVS 359
           WG++WGENGY K+     N CG+ +  S
Sbjct: 314 WGDSWGENGYIKMARNADNQCGIATQPS 341


>gi|148908373|gb|ABR17300.1| unknown [Picea sitchensis]
          Length = 357

 Score =  204 bits (518), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 129/372 (34%), Positives = 200/372 (53%), Gaps = 38/372 (10%)

Query: 6   LSSLLLLLLSSVLASAVAVND----DDAMIRQVVPSDGEQSEDHLLN------AEHHFSL 55
           ++ +L ++LS++LA A+AV+     ++     +V    +  E  L            F+ 
Sbjct: 1   MARILAIVLSTLLALAIAVSAARSFEETEYIDMVTDKIQNLESSLFKILGTNPKSVQFAE 60

Query: 56  FKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLG 115
           F  ++ K Y +  +  +RF  F  N+   + R  ++      + +F+D+T  EF  Q+LG
Sbjct: 61  FALRYGKRYDSVRQLVHRFNAFVKNVELIESRNSMNLPYTLAINEFADITWEEFHGQYLG 120

Query: 116 LNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHF 175
            ++         K         PT  DWR+ G V+ VK+Q  CGSCW+FS TGALE A+ 
Sbjct: 121 ASQNCSATKSNHK---FTDAQPPTKKDWREEGIVSPVKNQAHCGSCWTFSTTGALEAAYT 177

Query: 176 LSTGELVSLSEQQLVDCDHECDPEESGSCDS-GCNGGLMNSAFEYILKAGGVEREKDYPY 234
            +TG+ V LSEQQLVDC        +G+ ++ GC+GGL + AFEYI   GG++ E+ YPY
Sbjct: 178 QATGKTVILSEQQLVDC--------AGAFNNFGCSGGLPSQAFEYIKYNGGLDTEEAYPY 229

Query: 235 TGTDGGSCKFDKSKIAAAVS---NFSVISSDEDQMAANLVKHGPLAVGINAVW-MQTYIG 290
           T  D G C +D + +   V+   N S+ + D+ + A  LV+  P++V    +   + Y  
Sbjct: 230 TAKD-GVCNYDVNNVGVKVADSVNISLGAEDKLKSAVGLVR--PVSVAFQVIQDFRFYKE 286

Query: 291 GVSCPYICGKY---LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICM 347
           GV     CG+    ++H VL VGYG S       +  P+WIIKNSWG++WG  GY+K+ M
Sbjct: 287 GVFTSTTCGQGPMDVNHAVLAVGYGVSE------EGTPHWIIKNSWGKSWGVEGYFKMEM 340

Query: 348 GRNVCGVDSMVS 359
           G+N+CGV +  S
Sbjct: 341 GKNMCGVATCAS 352


>gi|225458701|ref|XP_002284973.1| PREDICTED: cysteine proteinase RD21a-like [Vitis vinifera]
          Length = 467

 Score =  204 bits (518), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 112/298 (37%), Positives = 163/298 (54%), Gaps = 21/298 (7%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           +  + +K  K+Y    E + RF++FK NLR        + T   G+ +F+DLT  E+R  
Sbjct: 51  YEAWLAKHGKSYNALGEKERRFQIFKDNLRFIDEHNAENRTYKVGLNRFADLTNEEYRSM 110

Query: 113 FLGLN---RRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGA 169
           +LG     +R      + +      + LP   DWR  GAV  VKDQG+CGSCW+FS   A
Sbjct: 111 YLGTRTAAKRRSSNKISDRYAFRVGDSLPESVDWRKKGAVVEVKDQGSCGSCWAFSTIAA 170

Query: 170 LEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVERE 229
           +EG + + TG L+SLSEQ+LVDCD         S + GCNGGLM+ AFE+I+  GG++ E
Sbjct: 171 VEGINKIVTGGLISLSEQELVDCDT--------SYNEGCNGGLMDYAFEFIINNGGIDSE 222

Query: 230 KDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQT 287
           +DYPY  +DG   ++ K+     +  +  +  ++++     V + P++V I A     Q 
Sbjct: 223 EDYPYKASDGRCDQYRKNAKVVTIDGYEDVPENDEKSLEKAVANQPVSVAIEAGGREFQL 282

Query: 288 YIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKI 345
           Y  G+     CG  LDHGV  VGYG+            YWI+KNSWG +WGE GY ++
Sbjct: 283 YQSGIFTGR-CGTALDHGVTAVGYGTENGV-------DYWIVKNSWGASWGEEGYIRM 332


>gi|348514005|ref|XP_003444531.1| PREDICTED: cathepsin L1-like [Oreochromis niloticus]
          Length = 338

 Score =  204 bits (518), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 127/321 (39%), Positives = 171/321 (53%), Gaps = 24/321 (7%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH----GVTKFSDLT 105
           + H++L+KS  +K Y  +EE  +R  V++ NL++ +   L      H    G+  F D+T
Sbjct: 27  DEHWNLWKSWHTKKYHEKEE-GWRRMVWEKNLKKIELHNLDHSMGKHTYRLGMNHFGDMT 85

Query: 106 PSEFRRQFLGLNRRLRLPADAQKAPILPTNDL--PTDFDWRDHGAVTGVKDQGACGSCWS 163
             EFR+   G   +         +  L  N L  P   DWRD G VT VKDQG CGSCW+
Sbjct: 86  NEEFRQLMNGYKHKAERKVKG--SLFLEPNFLEAPRSLDWRDKGYVTPVKDQGQCGSCWA 143

Query: 164 FSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA 223
           FSATGALEG  F  TG++V LSEQ LV+C     PE     + GCNGGLM+ AF+Y+   
Sbjct: 144 FSATGALEGQQFRKTGKMVQLSEQNLVECSR---PE----GNEGCNGGLMDQAFQYVKDN 196

Query: 224 GGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVGINA 282
            G++ E+ YPY GTD   C +D    A   + F  + S  E  +   +   GP++V I+A
Sbjct: 197 QGLDSEESYPYLGTDDQKCHYDPRYNAVNDTGFVDIKSGSEHALMKAVTAVGPISVAIDA 256

Query: 283 --VWMQTYIGGVSC-PYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGE 339
                Q Y  G+   P    + LDHGVL+VGY   GF       K YWI+KNSW E WG+
Sbjct: 257 GHESFQFYQSGIYYEPECSSEELDHGVLLVGY---GFEGEDVDGKKYWIVKNSWSEKWGD 313

Query: 340 NGYYKICMGR-NVCGVDSMVS 359
            GY  +   R N CG+ +  S
Sbjct: 314 KGYVYMAKDRQNHCGIATAAS 334


>gi|357130141|ref|XP_003566711.1| PREDICTED: xylem cysteine proteinase 1-like [Brachypodium
           distachyon]
          Length = 457

 Score =  204 bits (518), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 130/335 (38%), Positives = 180/335 (53%), Gaps = 36/335 (10%)

Query: 42  SEDHLLNAEHHFSLFK---SKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGV 98
           SE+ L + +    LF+   +K  K YA+ EE  +RF VFK NL+   +      +   G+
Sbjct: 136 SEEDLSSNDRIIELFEKWLAKHQKAYASFEEKLHRFEVFKDNLKHIDKVNREVTSYWLGL 195

Query: 99  TKFSDLTPSEFRRQFLGLNRRLRLPADAQ------KAPILPTNDLPTDFDWRDHGAVTGV 152
            +F+DLT  EF+  +LGL      PA A+      K   +  +DLP   DWR  GAVT V
Sbjct: 196 NEFADLTHEEFKATYLGLAP----PAPARESRGSFKYEDVSADDLPKSVDWRTKGAVTEV 251

Query: 153 KDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGL 212
           K+QG CGSCW+FS   A+EG + + TG L +LSEQ+L+DC        S   ++GCNGGL
Sbjct: 252 KNQGQCGSCWAFSTVAAVEGINAIVTGNLTALSEQELIDC--------SVDGNNGCNGGL 303

Query: 213 MNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKI-AAAVSNFSVISSDEDQMAANLV 271
           M+ AF YI  +GG+  E+ YPY   +G      KS+  A  +S +  + +  +Q     +
Sbjct: 304 MDYAFSYIASSGGLHTEEAYPYLMEEGSCGDGKKSESEAVTISGYEDVPAHNEQALIKAL 363

Query: 272 KHGPLAVGINAV--WMQTYIGGV-SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWI 328
            H P++V I A     Q Y GGV   P  CG  LDHGV  VGYGS      + K   Y I
Sbjct: 364 AHQPVSVAIEASGRHFQFYSGGVFDGP--CGTQLDHGVAAVGYGSD-----KGKGHDYII 416

Query: 329 IKNSWGENWGENGYYKI----CMGRNVCGVDSMVS 359
           ++NSWG  WGE GY ++      G  +CG++ M S
Sbjct: 417 VRNSWGAKWGEKGYIRMKRGTGKGEGLCGINKMAS 451


>gi|169659203|dbj|BAG12786.1| putative cysteine protease [Sorogena stoianovitchae]
          Length = 293

 Score =  204 bits (518), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 123/310 (39%), Positives = 174/310 (56%), Gaps = 34/310 (10%)

Query: 56  FKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLG 115
            + +++KTY   E+  +R  +F  ++R  +       +   G+ +F+DLT  EF   +LG
Sbjct: 9   LEGEYNKTYGGAEDK-HRLALFAESVRIVETENAKGHSYTLGLNQFADLTTEEFSSLYLG 67

Query: 116 LNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHF 175
           L   L     A ++ +L   D   + DWR  GAVT VKDQ +CGSCW+FSATGA+EGA  
Sbjct: 68  L--VLENKVQASESVVLQDGDSEENVDWRQKGAVTPVKDQKSCGSCWAFSATGAMEGALV 125

Query: 176 LSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYT 235
            STG+L++LSEQQLVDC  +C+         GCNGGLM +AF+Y+L  G    EKDYPY 
Sbjct: 126 KSTGKLINLSEQQLVDCVTKCN---------GCNGGLMTAAFDYVLGRGRAT-EKDYPYK 175

Query: 236 GTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAV-WMQTYIGGVSC 294
           G D G CK  ++     +  ++ +  + +  A       PL+V +NA   +Q Y  GV  
Sbjct: 176 GVD-GRCK--QTATDNKIKGYNNVPQN-NYKALKAAVASPLSVAVNAAGTIQRYKSGV-I 230

Query: 295 PYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRN---- 350
              CG  LDHGVL VGY          + + YWI+KNSWG  +GENGY+++ MG      
Sbjct: 231 DANCGTRLDHGVLAVGY----------QGEDYWIVKNSWGNGYGENGYFRVKMGTQNGGA 280

Query: 351 -VCGVDSMVS 359
            VCG++ M +
Sbjct: 281 GVCGINMMAA 290


>gi|225706370|gb|ACO09031.1| Cathepsin L precursor [Osmerus mordax]
          Length = 337

 Score =  204 bits (518), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 127/321 (39%), Positives = 171/321 (53%), Gaps = 24/321 (7%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH----GVTKFSDLT 105
           + H+ L+KS  SK Y  ++E  +R  V++ NL++ +   L      H    G+  F D+T
Sbjct: 26  DEHWDLWKSWHSKNYQHEKEEGWRRMVWEKNLKKIEMHNLEHSLGKHSYSLGMNHFGDMT 85

Query: 106 PSEFRRQFLGLNRRLRLPADAQKAPILPTNDL--PTDFDWRDHGAVTGVKDQGACGSCWS 163
             EFR+   G   + R     + +  L  N++  P   DWR+ G VT VKDQG CGSCW+
Sbjct: 86  NEEFRQVMNGYKLQQR---KFKGSLFLEPNNMEAPKQVDWREEGYVTPVKDQGQCGSCWA 142

Query: 164 FSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA 223
           FS TGA+EG  F  T +LVSLSEQ LVDC     PE     + GCNGGLM+ AF+YI   
Sbjct: 143 FSTTGAMEGQMFRKTQKLVSLSEQNLVDCSR---PE----GNEGCNGGLMDQAFQYIQDN 195

Query: 224 GGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVGINA 282
            G++ E+ YPY GTD   C +     AA  + F  + S  E  +   +   GP++V I+A
Sbjct: 196 SGLDSEEAYPYLGTDDQPCNYKAEFSAANDTGFMDIPSGKEHALMKAIASVGPVSVAIDA 255

Query: 283 --VWMQTYIGGVSCPYIC-GKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGE 339
                Q Y  G+     C  + LDHGVL VGY   GF       K YWI+KNSW E WG+
Sbjct: 256 GHESFQFYQSGIYYEKECSSEELDHGVLAVGY---GFEGEDVDGKKYWIVKNSWSEKWGD 312

Query: 340 NGYYKICMGR-NVCGVDSMVS 359
            GY  +   R N CG+ +  S
Sbjct: 313 KGYILMAKDRKNHCGIATAAS 333


>gi|6851030|emb|CAB71032.1| cysteine protease [Lolium multiflorum]
          Length = 359

 Score =  204 bits (518), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 131/347 (37%), Positives = 182/347 (52%), Gaps = 33/347 (9%)

Query: 27  DDAMIRQVVPSDGEQSEDHLLNA----EH--HFSLFKSKFSKTYATQEEHDYRFRVFKAN 80
           D   IR V        E  +L A     H   F+ F  +  K+Y +  E   RFR+F  +
Sbjct: 26  DSNPIRPVTERAASAVESTVLGALGRTRHALRFARFAVRHGKSYGSAAEVQRRFRIFSES 85

Query: 81  LRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTD 140
           L   +       +   G+ +FSD+T  EF+   LG  +       A    +   N LP  
Sbjct: 86  LDEVRSTNRKGLSYKLGINRFSDMTWEEFQATKLGAAQTCSATL-AGNHLMRDANALPET 144

Query: 141 FDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEE 200
            DWR+ G V+ VKDQ +CGSCW+FS TGALE A+  +TG+ +SLSEQQLVDC        
Sbjct: 145 KDWRETGIVSPVKDQASCGSCWTFSTTGALEAAYTQATGKNISLSEQQLVDC-------- 196

Query: 201 SGSCDS-GCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVS---NF 256
           +G+ ++ GCNGGL + AFEYI   GG++ E+ YPY G + G CK+     A  V+   N 
Sbjct: 197 AGAYNNFGCNGGLPSQAFEYIKYNGGIDTEESYPYKGVN-GVCKYRPENAAVQVADSVNI 255

Query: 257 SVISSDEDQMAANLVKHGPLAVGINAV-WMQTYIGGVSCPYICGKYLD---HGVLIVGYG 312
           ++ + DE + A  LV+  P++V    +   + Y  GV     CG   D   H VL VGYG
Sbjct: 256 TLNAEDELKNAVGLVR--PVSVAFEVIDGFKQYKSGVYTSDHCGTTPDDVNHAVLAVGYG 313

Query: 313 SSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVS 359
                       PYW+IKNSWG +WGE+GY+K+ MG+N+C V +  S
Sbjct: 314 VENGV-------PYWLIKNSWGADWGEDGYFKMEMGKNMCAVATCAS 353


>gi|428186189|gb|EKX55040.1| hypothetical protein GUITHDRAFT_63227 [Guillardia theta CCMP2712]
          Length = 344

 Score =  203 bits (517), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 127/301 (42%), Positives = 169/301 (56%), Gaps = 27/301 (8%)

Query: 74  FRVFKANL-----RRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLN-RRLRLPAD-- 125
           F VF+ NL        +  Q L    + G+  F+ LT  EF  Q+LG     +  P    
Sbjct: 52  FEVFQKNLDMIMKHNEEYNQGLQSYEM-GLNGFAHLTFEEFSAQYLGYGGAEVEQPKTRR 110

Query: 126 AQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLS 185
           A K      +++P   DWR+ GAV  VK+QGACGSCW+FSA  ALEGAHFL++GEL+SLS
Sbjct: 111 AGKHERKSRSEIPASVDWREKGAVAEVKNQGACGSCWAFSAVAALEGAHFLNSGELISLS 170

Query: 186 EQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK--AGGVEREKDYPYTGTDGGSCK 243
           EQQLVDC  +         + GC GG M++AFEY +     G + EKDYPY G D G CK
Sbjct: 171 EQQLVDCSKKFG-------NHGCAGGYMDNAFEYWMNNTGHGDDSEKDYPYKGMD-GKCK 222

Query: 244 FDKSKIAAAVSNFS-VISSDEDQMAANLVKHGPLAVGINA-VWMQTYIGGV--SCPYICG 299
           F    + A +S ++ V   +E  +   +   GP++V I+A   +Q Y+ GV       C 
Sbjct: 223 FSADGVRATISGYNDVKQGNETDLLDAVANVGPVSVAIHAGAALQFYLRGVFNGVAGTCF 282

Query: 300 KYLDHGVLIVGYGSSGFAPIRFKEK-PYWIIKNSWGENWGENGYYKICMGRNVCGVDSMV 358
             L+HGV  VGYG+   A +RF  K  YWIIKNSWG  WGE G+ +   G+N+CGV +  
Sbjct: 283 GPLNHGVTAVGYGT---ASLRFGRKMDYWIIKNSWGMGWGEKGFVRFARGKNLCGVANGA 339

Query: 359 S 359
           S
Sbjct: 340 S 340


>gi|328866326|gb|EGG14711.1| hypothetical protein DFA_10969 [Dictyostelium fasciculatum]
          Length = 369

 Score =  203 bits (517), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 132/346 (38%), Positives = 188/346 (54%), Gaps = 45/346 (13%)

Query: 46  LLNAEHHFSLFKS---KFSKTYATQEEHDY--RFRVFKANLRRAKRRQLLDPTAVHGV-- 98
           L + E + + FK    +F K Y   E H++  RF +FK N+   K     D +  H +  
Sbjct: 33  LFSHEQYTTEFKGWVGQFEKNY---ESHEFLNRFDIFKKNMDYIKTWN--DKSVDHKLEL 87

Query: 99  TKFSDLTPSEFRRQFLG--LNRRLRL---PADAQ-----KAPILPTNDLPTDFDWRDHGA 148
              +DLT  E++R +LG  +N  LR+    AD +     K+      D P + DWR  GA
Sbjct: 88  NTLADLTDKEYQRLYLGTKVNGALRVGLNHADERDFGHIKSVFSNVKDNP-NVDWRKQGA 146

Query: 149 VTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGC 208
           V+ VK+QG CGSCWSFS+TGA+EGAH + TGE++SLSEQQLVDC            ++GC
Sbjct: 147 VSHVKNQGQCGSCWSFSSTGAIEGAHAIKTGEMISLSEQQLVDCSKRYG-------NNGC 199

Query: 209 NGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVI-SSDEDQMA 267
           NGGLM  AF+Y++ AGG+E E+ YPYT TD  +C F+ +    ++S+   I + +E  + 
Sbjct: 200 NGGLMTLAFDYVIDAGGLESEEAYPYTTTDTSACMFNSTNAVTSISDHQNIRAGNEKHLE 259

Query: 268 ANLVKHGPLAVGINAV--WMQTYIGGV-SCPYICGKYLDHGVLIVGYGSSG--------- 315
             L   GP++V I+A     + Y  G+   P      LDHGVL VG+G            
Sbjct: 260 TVLRNVGPVSVAIDASPRSFRFYKSGIFYAPECSSSQLDHGVLAVGFGKGNPESNFENKV 319

Query: 316 -FAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVS 359
            F     K   Y+I+KNSWG +WG NG+  +   R N CG+ +M +
Sbjct: 320 SFIHDDTKNNEYYIVKNSWGSDWGSNGFIYMSKNRKNNCGIATMAT 365


>gi|356533293|ref|XP_003535200.1| PREDICTED: LOW QUALITY PROTEIN: cysteine proteinase RD21a-like
           [Glycine max]
          Length = 466

 Score =  203 bits (517), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 123/323 (38%), Positives = 172/323 (53%), Gaps = 31/323 (9%)

Query: 51  HHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLL-DPTAVHGVTKFSDLTPSEF 109
           H +  +  K  K Y    E + RF++FK NLR  +      D +   G+ KF+DLT  E+
Sbjct: 46  HVYEAWLVKHGKAYNALGEKERRFKIFKDNLRFIEEHNGAGDKSYKLGLNKFADLTNEEY 105

Query: 110 RRQFLGLNRRLRLPADAQKAPILPTN--------DLPTDFDWRDHGAVTGVKDQGACGSC 161
           R  FLG   R R P +        T+        +LP   DWR+ GAVT +KDQG CGSC
Sbjct: 106 RAMFLGT--RTRGPKNKAAVVAKKTDRYAYRAGEELPAMVDWREKGAVTPIKDQGQCGSC 163

Query: 162 WSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYIL 221
           W+FS  GA+EG + + TG L SLSEQ+LVDCD           + GCNGGLM+ AFE+I+
Sbjct: 164 WAFSTVGAVEGINQIVTGNLTSLSEQELVDCDR--------GYNMGCNGGLMDYAFEFIV 215

Query: 222 KAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGIN 281
           + GG++ E+DYPY   D       K+     +  +  + +++++     V + P++V I 
Sbjct: 216 QNGGIDTEEDYPYHAKDNTCDPNRKNARVVTIDGYEDVPTNDEKSLMKAVANQPVSVAIE 275

Query: 282 AVWM--QTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGE 339
           A  M  Q Y  GV     CG  LDHGV+ VGYG+            YW+++NSWG  WGE
Sbjct: 276 AGGMEFQLYQSGVFTGR-CGTNLDHGVVAVGYGTE-------NGTDYWLVRNSWGSAWGE 327

Query: 340 NGYYKICMGRNVCGVDSMVSSVA 362
           NGY K  + RNV   ++    +A
Sbjct: 328 NGYIK--LERNVQNTETGKCGIA 348


>gi|388521567|gb|AFK48845.1| unknown [Medicago truncatula]
          Length = 343

 Score =  203 bits (517), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 135/355 (38%), Positives = 188/355 (52%), Gaps = 34/355 (9%)

Query: 8   SLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQ 67
           +LL++      A+A     D   IR V  SD E+    ++      S F +++ K Y T 
Sbjct: 5   TLLIVFFCVATAAAGLSFHDSNPIRMV--SDMEEQLLQVIGE----SRFANRYGKRYDTV 58

Query: 68  EEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGL--NRRLRLPAD 125
           +E   RF++F  NL+  K           GV  F+D T  EFR   LG   N    L  +
Sbjct: 59  DEMKRRFKIFSENLQLIKSTNKKRLGYTLGVNHFADWTWEEFRSHRLGAAQNCSATLKGN 118

Query: 126 AQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLS 185
            +   ++    LP + DWR  G V+ VKDQG CGSCW+FS TGALE A+  + G+ +SLS
Sbjct: 119 HRITDVV----LPAEKDWRKEGIVSEVKDQGHCGSCWTFSTTGALESAYAQAFGKNISLS 174

Query: 186 EQQLVDCDHECDPEESGSCDS-GCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKF 244
           EQQLVDC        +G+ ++ GCNGGL + AFEYI   GG+E E+ YPYTG + G CKF
Sbjct: 175 EQQLVDC--------AGAYNNFGCNGGLPSQAFEYIKYNGGLETEEVYPYTGQN-GLCKF 225

Query: 245 DKSKIAAAV-SNFSVISSDEDQMAANLVKHGPLAVGINAV-WMQTYIGGVSCPYICGKY- 301
               +A  V  + ++    ED++   +    P++V    V   + Y  GV     CG   
Sbjct: 226 TSENVAVQVLGSVNITLGAEDELKHAVAFARPVSVAFQVVDDFRLYKKGVYTGTTCGSTP 285

Query: 302 --LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGV 354
             ++H VL VGYG            PYW+IKNSWG  WG++GY+K+ MG+N+CGV
Sbjct: 286 MDVNHAVLAVGYGIE-------DGVPYWLIKNSWGGEWGDHGYFKMEMGKNMCGV 333


>gi|1185457|gb|AAA87848.1| cathepsin L, partial [Schistosoma japonicum]
          Length = 224

 Score =  203 bits (517), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 105/234 (44%), Positives = 147/234 (62%), Gaps = 19/234 (8%)

Query: 130 PILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQL 189
           P     D+P +FDWR+ GAVT VK+QG CGSCW+FS TG +E   F  TG+L+SLSEQQL
Sbjct: 3   PRREVGDIPNNFDWREKGAVTEVKNQGMCGSCWAFSTTGNIESQWFRKTGKLLSLSEQQL 62

Query: 190 VDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKI 249
           VDCD         S D GCNGGL ++A+E I++ GG+  E +YPY   +   C      +
Sbjct: 63  VDCD---------SLDDGCNGGLPSNAYESIIRMGGLMLEDNYPYDAKN-EKCHLKVGNV 112

Query: 250 AAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPY--ICGKY-LDHGV 306
           AA +++   ++ DE ++A  L  H  ++VG+NA+ +Q Y  G+S P+   C KY LDH V
Sbjct: 113 AAYINSSVNLTQDESELAIWLYHHSAISVGMNALLLQFYRHGISHPWWIFCSKYLLDHAV 172

Query: 307 LIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSS 360
           L+VGYG S       K +P+WI+KNSWG  WGE GY+++  G   CG+++  +S
Sbjct: 173 LLVGYGVSE------KNEPFWIVKNSWGVEWGEKGYFRMYRGDGTCGINTGATS 220


>gi|281211531|gb|EFA85693.1| cysteine protease [Polysphondylium pallidum PN500]
          Length = 366

 Score =  203 bits (517), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 123/339 (36%), Positives = 177/339 (52%), Gaps = 47/339 (13%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           F+ +  KF + Y+  E    ++  FK+N+         +   V  +   +D +P E+++ 
Sbjct: 27  FTDWTHKFQRLYSNNEFLK-KYHTFKSNMDYVHSWNAKNSDTVLELNHLADHSPEEYKKF 85

Query: 113 FLGLNRRLRLPADAQKAPI---LPT--NDLPTDFDWRDHGAVTGVKDQGACGSCWSFSAT 167
           +LG  R   +  + Q   I   L T   D     DWR  GAV+ +KDQG CGSCWSFS T
Sbjct: 86  YLGT-RVKHIHFNVQGTHINTQLSTVFEDSGATVDWRKKGAVSPIKDQGQCGSCWSFSTT 144

Query: 168 GALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVE 227
           G++EGAH + TG +V LSEQ LVDC        S   + GCNGGLMN+AF+YI+   G++
Sbjct: 145 GSVEGAHQIKTGNMVELSEQNLVDC-------SSAEGNMGCNGGLMNNAFDYIISNHGID 197

Query: 228 REKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKH-GPLAVGINAVW-- 284
            E+ YPYT   G  CKF+K+ + A +S++  I+   +   AN VK  GP++V I+A    
Sbjct: 198 TEQSYPYTANTGSVCKFNKTNVGATISSYKSITPGSETDLANAVKTAGPVSVAIDASHRS 257

Query: 285 MQTYIGGVSCPYICGKY-LDHGVLIVGYGSS----------------------GFAPIRF 321
            Q Y  G+   ++C    LDHGVL+VGYGS                       G   ++ 
Sbjct: 258 FQLYSHGIYYEWLCSSTRLDHGVLVVGYGSGNPPNSDMDHMILKKTAKTDHYHGKKSLKV 317

Query: 322 KE------KPYWIIKNSWGENWGENGYYKICMGR-NVCG 353
           ++      K YWI+KNSW + WG+ GY  +   R N CG
Sbjct: 318 EKVDTTSSKNYWIVKNSWSDTWGDKGYIYMSKDRKNNCG 356


>gi|9634237|ref|NP_037776.1| ORF16 cathepsin [Spodoptera exigua MNPV]
 gi|37077857|sp|Q9J8B9.1|CATV_NPVSE RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|6960476|gb|AAF33546.1|AF169823_16 ORF16 cathepsin [Spodoptera exigua MNPV]
          Length = 337

 Score =  203 bits (517), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 113/326 (34%), Positives = 179/326 (54%), Gaps = 35/326 (10%)

Query: 49  AEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSE 108
           A  +F  F ++++K Y +++E  YR+ +F+ N+    ++   + +AV+ + +F+D+  +E
Sbjct: 36  APLYFEKFITQYNKQYKSEDEKKYRYNIFRHNIESINQKNSRNDSAVYKINRFADMPKNE 95

Query: 109 FRRQF-------LGLN--RRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACG 159
              +        LGLN    + +   AQ+         P  FDWR    +T VKDQG CG
Sbjct: 96  IVIRHTGLASGELGLNFCETIVVDGPAQRQR-------PVSFDWRSMNKITSVKDQGMCG 148

Query: 160 SCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEY 219
           +CW F++ GALE  + +    L+ LSEQQLVDCD           D GC+GGL+++A+E 
Sbjct: 149 ACWRFASLGALESQYAIKYDRLIDLSEQQLVDCDF---------VDMGCDGGLIHTAYEQ 199

Query: 220 ILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAV 278
           I+K GGVE+E DY Y   +   C     K A  V N +  +  +E+++   L   GP+A+
Sbjct: 200 IMKMGGVEQEFDYSYKA-ERQPCALKPHKFATGVRNCYRYVILNEERLEDLLRYVGPIAI 258

Query: 279 GINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWG 338
            ++AV +  Y GG+   +     L+H VL+VGYG            PYWIIKNSWG ++G
Sbjct: 259 AVDAVDLTDYYGGI-VSFCENNGLNHAVLLVGYGVEN-------NVPYWIIKNSWGSDYG 310

Query: 339 ENGYYKICMGRNVCGVDSMVSSVAAI 364
           E+GY ++  G N CG+ + ++S A +
Sbjct: 311 EDGYVRVRRGVNSCGMINELASSAQV 336


>gi|170041165|ref|XP_001848344.1| cathepsin l [Culex quinquefasciatus]
 gi|167864709|gb|EDS28092.1| cathepsin l [Culex quinquefasciatus]
          Length = 340

 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 127/324 (39%), Positives = 174/324 (53%), Gaps = 31/324 (9%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRR-AKRRQLLDPTAVH---GVTKFSDLTPSE 108
           ++ +K +  K Y ++ E   R +++  N  + AK  Q  +         V K++DL   E
Sbjct: 27  WNAYKLQHRKKYDSETEERLRLKIYVQNKHKIAKHNQRFEQGQEKFRLRVNKYTDLLHEE 86

Query: 109 FRRQFLGLNR-RLRLPA------DAQKAPILPTN-DLPTDFDWRDHGAVTGVKDQGACGS 160
           F +   G NR   + P       D     I P N ++P   DWR+ GAVT VKDQG CGS
Sbjct: 87  FVQTLNGFNRTNAKKPMLKGVKIDEPVTYIEPANVEVPKTVDWREKGAVTPVKDQGHCGS 146

Query: 161 CWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYI 220
           CWSFSATGALEG HF  TG+LVSLSEQ LVDC        +   ++GCNGG+M+ AF+YI
Sbjct: 147 CWSFSATGALEGQHFRKTGKLVSLSEQNLVDCS-------TKYGNNGCNGGMMDFAFQYI 199

Query: 221 LKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVG 279
              GG++ EK YPY   D  +C ++   + A    F  +   DE  +   +   GP++V 
Sbjct: 200 KDNGGIDTEKAYPYEAID-DTCHYNPKAVGATDKGFVDIPQGDEKALMKAIATAGPVSVA 258

Query: 280 INAVW--MQTYIGGVSCPYIC-GKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGEN 336
           I+A     Q Y  GV     C  + LDHGVL VGYG+S       + + YW++KNSWG  
Sbjct: 259 IDASHESFQFYSEGVYYEPQCDSENLDHGVLAVGYGTSE------EGEDYWLVKNSWGTT 312

Query: 337 WGENGYYKICMGR-NVCGVDSMVS 359
           WG+ GY K+   R N CG+ +  S
Sbjct: 313 WGDQGYVKMARNRDNHCGIATAAS 336


>gi|118127|sp|P25251.1|CYSP4_BRANA RecName: Full=Cysteine proteinase COT44; Flags: Precursor
          Length = 328

 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 118/302 (39%), Positives = 165/302 (54%), Gaps = 34/302 (11%)

Query: 69  EHDYRFRVFKANLRRAKRRQLLDPTAVH--GVTKFSDLTPSEFRRQFLGLN----RRLRL 122
           + D RF +FK NLR        +  A +  G+T F++LT  E+R  +LG      RR+  
Sbjct: 24  QQDERFNIFKDNLRFIDLHNENNKNATYKLGLTIFANLTNDEYRSLYLGARTEPVRRITK 83

Query: 123 PADA--QKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGE 180
             +   + +  +  +++P   DWR  GAV  +KDQG CGSCW+FS   A+EG + + TGE
Sbjct: 84  AKNVNMKYSAAVNVDEVPVTVDWRQKGAVNAIKDQGTCGSCWAFSTAAAVEGINKIVTGE 143

Query: 181 LVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGG 240
           LVSLSEQ+LVDCD         S + GCNGGLM+ AF++I+K GG+  EKDYPY GT+G 
Sbjct: 144 LVSLSEQELVDCDK--------SYNQGCNGGLMDYAFQFIMKNGGLNTEKDYPYHGTNGK 195

Query: 241 SCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSCPYIC 298
                K+     +  +  + S ++      V + P++V I+A     Q Y  G+     C
Sbjct: 196 CNSLLKNSRVVTIDGYEDVPSKDETALKRAVSYQPVSVAIDAGGRAFQHYQSGIFTGK-C 254

Query: 299 GKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNV------C 352
           G  +DH V+ VGYGS            YWI++NSWG  WGE+GY  I M RNV      C
Sbjct: 255 GTNMDHAVVAVGYGSENGV-------DYWIVRNSWGTRWGEDGY--IRMERNVASKSGKC 305

Query: 353 GV 354
           G+
Sbjct: 306 GI 307


>gi|146078033|ref|XP_001463431.1| cathepsin L-like protease [Leishmania infantum JPCM5]
 gi|134067516|emb|CAM65796.1| cathepsin L-like protease [Leishmania infantum JPCM5]
          Length = 381

 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 124/311 (39%), Positives = 166/311 (53%), Gaps = 43/311 (13%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           F  FK  + + Y T  E   R   F+ NL   +  Q  +P A  G+TKF DL+ +EF  +
Sbjct: 38  FEEFKRTYRRAYGTLAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 113 FLGLNRRLRLPADAQKA------PILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSA 166
           +L  N      A  Q A           + +P   DWR+ GAVT VKDQGACGSCW+FSA
Sbjct: 98  YL--NGAAYFAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAFSA 155

Query: 167 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK--AG 224
            G +E     +   LVSLSEQQLV CD +         D+GCNGGLM  AFE++L+   G
Sbjct: 156 VGNIESQWARAGHGLVSLSEQQLVSCDDK---------DNGCNGGLMLQAFEWLLRHMYG 206

Query: 225 GVEREKDYPYTGTDGGSCK-FDKSKI--AAAVSNFSVISSDEDQMAANLVKHGPLAVGIN 281
            V  EK YPYT  +G   +  + SK+   A +  + +I S+E  MAA L ++GP+A+ ++
Sbjct: 207 IVFTEKSYPYTSGNGDVAECLNSSKLVPGAQIDGYVMIPSNETVMAAWLAENGPIAIAVD 266

Query: 282 AVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENG 341
           A    +Y                GVL+VGY  +G         PYW+IKNSWGE+WGE G
Sbjct: 267 ASSFMSY--------------QSGVLLVGYNKTGGV-------PYWVIKNSWGEDWGEKG 305

Query: 342 YYKICMGRNVC 352
           Y ++ MG N C
Sbjct: 306 YVRVAMGLNAC 316


>gi|157779038|gb|ABV71063.1| cathepsin L3 precursor [Schistosoma mansoni]
 gi|360044915|emb|CCD82463.1| subfamily C1A unassigned peptidase (C01 family) [Schistosoma
           mansoni]
          Length = 370

 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 128/326 (39%), Positives = 169/326 (51%), Gaps = 38/326 (11%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRR----QLLDPTAVHGVTKFSDLTPSE 108
           +  FK +F + Y    E   RF +F AN  +        Q    T   GV +F+D T  E
Sbjct: 60  WKFFKIQFKRAYNGIHEETRRFFIFSANFVKMMEHNHAFQEGKVTYKMGVNEFTDKTDYE 119

Query: 109 FRRQFLGLNRRLRLPADA--QKAPILPTND---LPTDFDWRDHGAVTGVKDQGACGSCWS 163
            ++      R  ++ + A   K      ++   LP+  DWR  GAVT VK+QG CGSCW+
Sbjct: 120 LKKL-----RGYKVTSGAIRHKGSTFIRSEHTKLPSKVDWRREGAVTDVKNQGQCGSCWA 174

Query: 164 FSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA 223
           FS TGA+EG H+  T  LV+LSEQQLVDC            ++GC+GGLMNSAFEY+   
Sbjct: 175 FSTTGAIEGQHYRKTNRLVNLSEQQLVDCSKSYG-------NNGCSGGLMNSAFEYVRDN 227

Query: 224 GGVEREKDYPYT---GTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVG 279
            G++ E  YPY    GT+   C F+ S I A V+ + ++   DE  +   +   GP++V 
Sbjct: 228 EGIDSEISYPYVSGDGTENNRCLFNASNILAQVTGYVNIHEGDERALMDAVATKGPVSVA 287

Query: 280 INAVW--MQTYIGGVSCPYICG---KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWG 334
           INA       Y  G+     C      LDHGVL+VGYG           + YW+IKNSWG
Sbjct: 288 INAGLPSFSMYKSGIYSDTDCEGTLDALDHGVLVVGYGEE-------NGRSYWLIKNSWG 340

Query: 335 ENWGENGYYKICMG-RNVCGVDSMVS 359
           E WGE GY KI  G  N+CGV S  S
Sbjct: 341 EEWGEKGYIKISKGSHNMCGVASAAS 366


>gi|167526493|ref|XP_001747580.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163774026|gb|EDQ87660.1| predicted protein [Monosiga brevicollis MX1]
          Length = 330

 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 121/292 (41%), Positives = 164/292 (56%), Gaps = 30/292 (10%)

Query: 74  FRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILP 133
           FR   ANLR  +     + +   G+T+F+DLT +EF        +R  +     +  +  
Sbjct: 48  FRCHLANLRVIEAHNAGNSSFTMGITQFADLTAAEFS----AYVKRFPMNVTRPRNEVWI 103

Query: 134 TNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCD 193
           T     + DWR   AVT +K+QG CGSCWSFS TG++EGAH ++TG+LVSLSEQQL+DC 
Sbjct: 104 TEAPLQEVDWRQKNAVTEIKNQGQCGSCWSFSTTGSVEGAHAIATGKLVSLSEQQLMDCS 163

Query: 194 HECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAV 253
                  +   + GCNGGLM+ AFEY++  GG++ E+DYPYT  DG      + K AA +
Sbjct: 164 -------TRYGNHGCNGGLMDYAFEYVIANGGLDTEEDYPYTAEDGKCNTEKEKKHAAEI 216

Query: 254 SNF-SVISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSCPYICGKYLDHGVLIVG 310
             F +V    EDQ+AA  V  GP++V I A     Q Y  GV     CG  LDHGVL+VG
Sbjct: 217 HGFRNVPKEHEDQLAA-AVSIGPVSVAIEADQAGFQHYTSGVF-DGKCGTSLDHGVLVVG 274

Query: 311 YGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMG---RNVCGVDSMVS 359
           Y              YWI+KNSWG++WGE GY ++  G   + +CG+    S
Sbjct: 275 YSDD-----------YWIVKNSWGKSWGEEGYIRLKRGVDKKGMCGITMQAS 315


>gi|334332720|ref|XP_001367595.2| PREDICTED: cathepsin L1-like [Monodelphis domestica]
          Length = 333

 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 129/328 (39%), Positives = 179/328 (54%), Gaps = 32/328 (9%)

Query: 44  DHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH----GVT 99
           D  L+++ H   +K++  +TYA  E+  +R   ++ NL+  +   L      H    G+ 
Sbjct: 22  DQTLDSQWH--QWKAQHRRTYAANED-GWRRATWEKNLKMIEMHNLEYSAGKHSFQLGMN 78

Query: 100 KFSDLTPSEFRRQFLGLNR---RLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQG 156
           KF D+T  EF++   G N    + R      + P+L    LP   DWR+ G VT VK+QG
Sbjct: 79  KFGDMTTEEFKQVMNGYNSNGSQKRTKGSLYREPLLA--QLPKSVDWREKGYVTPVKNQG 136

Query: 157 ACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSA 216
            CGSCW+FSATG+LEG  F  T +LVSLSEQ LVDC        +   ++GC+GGLM++A
Sbjct: 137 QCGSCWAFSATGSLEGQWFHKTKKLVSLSEQNLVDCS-------TSEGNNGCSGGLMDNA 189

Query: 217 FEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISS-DEDQMAANLVKHGP 275
           FEY+   GG++ E+ YPY G D   CK+      A V+ F  I S +E  +   +   GP
Sbjct: 190 FEYVKNNGGIDTEQAYPYLGQD-NECKYRAECSGANVTGFVDIPSMNERALMKAVANVGP 248

Query: 276 LAVGINA--VWMQTYIGGVSC-PYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNS 332
           ++V I+A     Q Y  GV   P      LDHGVL+VGYGS G       +  YWI+KNS
Sbjct: 249 ISVAIDAGNPSFQFYESGVYYEPQCSSSQLDHGVLVVGYGSIG-------KDEYWIVKNS 301

Query: 333 WGENWGENGYYKICMGRNV-CGVDSMVS 359
           WGE WG+ GY  +   RN  CG+ +  S
Sbjct: 302 WGEEWGKKGYVLMAKFRNNHCGIATAAS 329


>gi|323457344|gb|EGB13210.1| hypothetical protein AURANDRAFT_18666 [Aureococcus anophagefferens]
          Length = 346

 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 128/331 (38%), Positives = 176/331 (53%), Gaps = 37/331 (11%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKR---RQLLDPTAVHGVTKFSDLTP 106
           E  F LFKS + K+Y + E    RF +F ANLR+ +    +++ +  A  GVT+F DLT 
Sbjct: 17  ESLFELFKSDYVKSYNSTEAEAERFTIFSANLRKTEALNAQRVDEDDAEFGVTQFMDLTE 76

Query: 107 SEFRRQFLG-LNRRLRLPADAQKAPILPTNDLPTDFDWR--DHGAVTGVKDQGACGSCWS 163
           +EF+ Q+L  +     L  D   AP       P   DWR    G V+ VKDQG CGSCW+
Sbjct: 77  AEFKAQYLNYVPSEQVLAEDVYAAP--EGFAAPGSLDWRTKQSGVVSDVKDQGQCGSCWA 134

Query: 164 FSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA 223
           FSAT  +E    L+  + +  + QQ+V CD           D GCNGG   +A+ Y+ KA
Sbjct: 135 FSATEQIESEWVLAGNDPLVFAPQQIVSCDK---------VDQGCNGGNTETAYAYVEKA 185

Query: 224 GGVEREKDYPY-TGTDGGSCKFDKSKIAAA-VSNFSVI----------SSDEDQMAANLV 271
           GG+  E  YPY +GT G + +  K + A   V +FS +            DED+MAA L 
Sbjct: 186 GGMALESAYPYKSGTSGNTGRCKKFETAGGDVESFSYVVPECKKGKCNDQDEDKMAAALA 245

Query: 272 KHGPLAVGINAVWMQTYIGGVSCPYICGKY----LDHGVLIVGY-GSSGFAPI---RFKE 323
            HGP ++ +NA   QTY  GV     CG +    LDH V +VGY G +G A       K+
Sbjct: 246 SHGPASICVNAGAWQTYTKGVMTNLQCGSHAANALDHCVQVVGYTGYTGDAKACGKGLKD 305

Query: 324 KPYWIIKNSWGENWGENGYYKICMGRNVCGV 354
           K  W ++NSWG +WG  GY ++ MG+N CG+
Sbjct: 306 KCVWNVRNSWGTSWGYQGYIRVQMGKNACGI 336


>gi|168047065|ref|XP_001775992.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672650|gb|EDQ59184.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 336

 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 122/319 (38%), Positives = 167/319 (52%), Gaps = 33/319 (10%)

Query: 52  HFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRR 111
           HF+ F +K+ K Y T EE  +RF  F  +++  +       +    V +F+D+T  EFR 
Sbjct: 28  HFAGFAAKYKKEYKTVEELKHRFVTFLESVKLVETHNKGQHSYSLAVNEFADMTFEEFRD 87

Query: 112 QFLGLNRRLRLPADAQKAP------ILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFS 165
                    RL    Q         +L    LP   DWR+ G V+ VK+Q +CGSCW+FS
Sbjct: 88  S--------RLMKGEQNCSATVGNHVLTGESLPKTKDWREEGIVSQVKNQASCGSCWTFS 139

Query: 166 ATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGG 225
            TGALE AH  +TG++V LSEQQLVDC  E +       + GC GGL + AFEYI   GG
Sbjct: 140 TTGALEAAHAQATGKMVLLSEQQLVDCAGEFN-------NFGCGGGLPSQAFEYIRYNGG 192

Query: 226 VEREKDYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVGINAVW 284
           ++ E  YPY   D   C+F K+ I A V +  ++    E Q+   +    P++V    V 
Sbjct: 193 IDTEDSYPYNAKD-SQCRFHKNTIGAQVWDVVNITEGAETQLKHAIATMRPVSVAFEVVH 251

Query: 285 -MQTYIGGVSCPYICG---KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGEN 340
             + Y GGV     C    + ++H VL VGYG            PYWIIKNSWG +WG N
Sbjct: 252 DFRLYNGGVYTSLNCHTGPQTVNHAVLAVGYGEDENGV------PYWIIKNSWGADWGMN 305

Query: 341 GYYKICMGRNVCGVDSMVS 359
           GY+ + MG+N+CGV +  S
Sbjct: 306 GYFNMEMGKNMCGVATCAS 324


>gi|318037269|ref|NP_001187182.1| cathepsin L precursor [Ictalurus punctatus]
 gi|196475596|gb|ACG76367.1| cathepsin L [Ictalurus punctatus]
          Length = 336

 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 128/319 (40%), Positives = 171/319 (53%), Gaps = 25/319 (7%)

Query: 52  HFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH----GVTKFSDLTPS 107
           H+  +K   +K Y  +EE  +R  V++ NL++ +   L      H     +  F D+   
Sbjct: 28  HWQQWKEWHNKDYHEKEE-GWRRMVWEKNLKKIELHNLEHSLGKHSYRLAMNHFGDMPHE 86

Query: 108 EFRRQFLGLNRRLRLPADAQKAPILPTNDL--PTDFDWRDHGAVTGVKDQGACGSCWSFS 165
           EFR+   G   ++R     + +  +  N L  P+  DWR+ G VT VKDQG CGSCW+FS
Sbjct: 87  EFRQVMNGYKHKVR---KIRGSLFMEPNFLEAPSKLDWREKGYVTPVKDQGQCGSCWAFS 143

Query: 166 ATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGG 225
            TGA+EG  F  TG+LVSLSEQ LVDC     PE     + GCNGGLM+ AF+YI   GG
Sbjct: 144 TTGAMEGQQFRKTGKLVSLSEQNLVDCSR---PE----GNEGCNGGLMDQAFQYIKDNGG 196

Query: 226 VEREKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVGINAVW 284
           ++ EK YPY GTD   C +D S  AA  + F  + S  E  +   +   GP++V I+A  
Sbjct: 197 LDTEKFYPYLGTDDQPCHYDPSYSAANDTGFVDIPSGKEHALMKAVTAVGPVSVAIDAGH 256

Query: 285 --MQTYIGGVSCPYIC-GKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENG 341
              Q Y  G+     C  + LDHGVL+VGYG  G        K YWI+KNSW E WG  G
Sbjct: 257 ESFQFYQSGIYYEADCSSEDLDHGVLVVGYGYEG---ENVDGKKYWIVKNSWSEQWGNKG 313

Query: 342 YYKICMGR-NVCGVDSMVS 359
           Y  +   R N CG+ +  S
Sbjct: 314 YIYMAKDRHNHCGIATAAS 332


>gi|414584879|tpg|DAA35450.1| TPA: cysteine protease 1 [Zea mays]
          Length = 522

 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 122/326 (37%), Positives = 176/326 (53%), Gaps = 41/326 (12%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLR--RAKRRQLLDPTAVHGVTKFSDLTPSEFR 110
           + L+ ++  + Y    E D RFRVF  NLR   A   +  +     G+ +F+DLT  EFR
Sbjct: 109 YELWLAEHGRAYNALGERDRRFRVFWDNLRFVDAHNERAAEHGFRLGMNQFADLTNDEFR 168

Query: 111 RQFLGLNRRLRLPADAQKAPILP--------TNDLPTDFDWRDHGAVTGVKDQGACGSCW 162
             +LG     R+PA  ++   +           +LP   DWR+ GAV  VK+QG CGSCW
Sbjct: 169 AAYLGA----RIPASRRRGTAVGERYRHGGGAEELPESVDWREKGAVAPVKNQGQCGSCW 224

Query: 163 SFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK 222
           +FSA  ++E  + + TGE+V+LSEQ+LV+C  +         +SGCNGGLM++AF++I+K
Sbjct: 225 AFSAVSSVESVNQIVTGEMVTLSEQELVECSTD-------GGNSGCNGGLMDAAFDFIIK 277

Query: 223 AGGVEREKDYPYTGTDGGSCKFDKSKI-AAAVSNFSVISSDEDQMAANLVKHGPLAVGIN 281
            GG++ E DYPY   D G C  ++      ++  F  +  ++++     V H P++V I 
Sbjct: 278 NGGIDTEGDYPYKAVD-GKCDINRENAKVVSIDGFEDVPENDEKSLQKAVAHQPVSVAIE 336

Query: 282 A--VWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGE 339
           A     Q Y  GV     C   LDHGV+ VGYG+          K YWI++NSWG  WGE
Sbjct: 337 AGGREFQLYKAGVF-TGTCTTNLDHGVVAVGYGTE-------NGKDYWIVRNSWGAKWGE 388

Query: 340 NGYYKICMGRNV------CGVDSMVS 359
           +GY +  M RNV      CG+  M S
Sbjct: 389 DGYIR--MERNVNATTGKCGIAMMAS 412


>gi|3451077|emb|CAA20473.1| cysteine proteinase-like protein [Arabidopsis thaliana]
 gi|7269200|emb|CAB79307.1| cysteine proteinase-like protein [Arabidopsis thaliana]
          Length = 355

 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 125/366 (34%), Positives = 195/366 (53%), Gaps = 34/366 (9%)

Query: 3   RLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSK 62
           R +  ++L LL+  VL++  +  D  A       S G    +     E  F ++ SK  K
Sbjct: 5   RPVCMTILFLLIVFVLSAPSSAMDLPAT------SGGHNRSNE--EVEFIFQMWMSKHGK 56

Query: 63  TYATQ-EEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNR-RL 120
           TY     E + RF+ FK NLR   +    + +   G+T+F+DLT  E+R  F G  + + 
Sbjct: 57  TYTNALGEKERRFQNFKDNLRFIDQHNAKNLSYQLGLTRFADLTVQEYRDLFPGSPKPKQ 116

Query: 121 RLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGE 180
           R    +++   L  + LP   DWR  GAV+ +KDQG C SCW+FS   A+EG + + TGE
Sbjct: 117 RNLKTSRRYVPLAGDQLPESVDWRQEGAVSEIKDQGTCNSCWAFSTVAAVEGLNKIVTGE 176

Query: 181 LVSLSEQQLVDCDHECDPEESGSCDSGCNG-GLMNSAFEYILKAGGVEREKDYPYTGTDG 239
           L+SLSEQ+LVDC+           ++GC G GLM++AF++++   G++ EKDYPY GT G
Sbjct: 177 LISLSEQELVDCNL---------VNNGCYGSGLMDTAFQFLINNNGLDSEKDYPYQGTQG 227

Query: 240 GSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPY--I 297
              +     +   + ++  + ++++      V H P++VG++    Q ++   SC Y   
Sbjct: 228 SCNRKQVHLLVITIDSYEDVPANDEISLQKAVAHQPVSVGVDKK-SQEFMLYRSCIYNGP 286

Query: 298 CGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMG----RNVCG 353
           CG  LDH ++IVGYGS          + YWI++NSWG  WG+ GY KI       + +CG
Sbjct: 287 CGTNLDHALVIVGYGSE-------NGQDYWIVRNSWGTTWGDAGYIKIARNFEDPKGLCG 339

Query: 354 VDSMVS 359
           +  + S
Sbjct: 340 IAMLAS 345


>gi|357166359|ref|XP_003580684.1| PREDICTED: oryzain alpha chain-like [Brachypodium distachyon]
          Length = 456

 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 120/321 (37%), Positives = 171/321 (53%), Gaps = 32/321 (9%)

Query: 35  VPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTA 94
           + S GE+SE+ +      +  + ++  +TY    E + RF VF+ NLR   +        
Sbjct: 27  IVSYGERSEEEV---RRMYVEWMAENGRTYNAIGEEERRFEVFRDNLRYVDQHNAAADAG 83

Query: 95  VH----GVTKFSDLTPSEFRRQFLGLN----RRLRLPADAQKAPILPTNDLPTDFDWRDH 146
           +H    G+ +F+DLT  E+R  +LG+     R  RL    Q A      +LP   DWR+ 
Sbjct: 84  LHSFRLGLNRFADLTNEEYRDTYLGVRTKPVRERRLSGRYQAAD---NEELPESVDWREK 140

Query: 147 GAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDS 206
           GAV  VKDQG CGSCW+FSA  A+EG + + TG++++LSEQ+LVDCD         S + 
Sbjct: 141 GAVAKVKDQGGCGSCWAFSAIAAVEGINQIVTGDMIALSEQELVDCDT--------SYNQ 192

Query: 207 GCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQM 266
           GCNGGLM+ AFE+I+  GG++ E+DYPY   D       K+     +  +  +  + +  
Sbjct: 193 GCNGGLMDYAFEFIINNGGIDSEEDYPYKERDNRCDANKKNAKVVTIDGYEDVPVNSELS 252

Query: 267 AANLVKHGPLAVGINA--VWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEK 324
               V + P++V I A     Q Y  G+     CG  LDHGV  VGYGS          K
Sbjct: 253 LKKAVANQPISVAIEAGGRAFQLYKSGIFTGR-CGTALDHGVTAVGYGSE-------NGK 304

Query: 325 PYWIIKNSWGENWGENGYYKI 345
            YWI+KNSWG  WGE+GY ++
Sbjct: 305 DYWIVKNSWGTVWGEDGYVRL 325


>gi|392881548|gb|AFM89606.1| cathepsin L [Callorhinchus milii]
          Length = 338

 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 127/319 (39%), Positives = 170/319 (53%), Gaps = 23/319 (7%)

Query: 52  HFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH----GVTKFSDLTPS 107
           H+  +KS   K+Y  +EE  +R  V++ +LR  +   L      H    G+  F D+   
Sbjct: 28  HWEQWKSWHGKSYEQKEE-TWRRMVWEKHLRVIEIHNLEHSLGKHSFRLGMNHFGDMPNE 86

Query: 108 EFRRQFLGLNRRLRLPADAQKAPILPTN--DLPTDFDWRDHGAVTGVKDQGACGSCWSFS 165
           EFR+   G   + +     Q +  L  N  ++P   DWRD G VT VKDQG CGSCW+FS
Sbjct: 87  EFRQLMNGYKYK-QTHKKLQGSHFLEPNFQEVPKHVDWRDEGYVTPVKDQGQCGSCWAFS 145

Query: 166 ATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGG 225
            TGALEG HF  TG+LVSLSEQ LV+C     PE     + GCNGGLM+ AF+Y+   GG
Sbjct: 146 TTGALEGQHFRRTGQLVSLSEQNLVEC---SKPE----GNEGCNGGLMDQAFQYVKDNGG 198

Query: 226 VEREKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVGINA-- 282
           ++ E  YPY GTD   C ++    AA  + F  + S  E  +   +   GP++V I+A  
Sbjct: 199 IDSEDSYPYVGTDDTPCHYNPQYNAANDTGFVDIPSGKERALMKAIAAVGPVSVAIDAGH 258

Query: 283 VWMQTYIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENG 341
              Q Y  G+     C    LDHGVL+VGY   G        K YWI+KNSW E WG+NG
Sbjct: 259 TSFQFYQSGIYFEAECSSTDLDHGVLVVGY---GVEKRDTDGKKYWIVKNSWSEKWGQNG 315

Query: 342 YYKICMGR-NVCGVDSMVS 359
           Y  +   + N CG+ +  S
Sbjct: 316 YILMAKDKDNHCGIATAAS 334


>gi|242044818|ref|XP_002460280.1| hypothetical protein SORBIDRAFT_02g025920 [Sorghum bicolor]
 gi|241923657|gb|EER96801.1| hypothetical protein SORBIDRAFT_02g025920 [Sorghum bicolor]
          Length = 363

 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 124/325 (38%), Positives = 173/325 (53%), Gaps = 44/325 (13%)

Query: 52  HFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRR 111
            F+ F  ++ K+Y +  E   RFR+F  +L+  +       +   G+ +FSD++  EFR 
Sbjct: 61  RFARFAVRYGKSYESAAEVQKRFRIFSESLQLVRSTNRKGLSYRLGINRFSDMSWEEFRA 120

Query: 112 QFLGL----------NRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSC 161
             LG           N R+R  A A          LP   DWR+ G V+ VK+QG CGSC
Sbjct: 121 TRLGAAQNCSATLAGNHRMRAAAVA----------LPKTKDWREDGIVSPVKNQGHCGSC 170

Query: 162 WSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYIL 221
           W+FS TGALE A+  +TG+ +SLSEQQLVDC    +       + GCNGGL + AFEYI 
Sbjct: 171 WTFSTTGALEAAYTQATGKPISLSEQQLVDCGKPFN-------NFGCNGGLPSQAFEYIK 223

Query: 222 KAGGVEREKDYPYTGTDGGSCKFDKSKIAAAV---SNFSVISSDEDQMAANLVKHGPLAV 278
             GG++ E+ YPY G + G C F    +   V    N ++ + DE + A  LV+  P++V
Sbjct: 224 YNGGLDTEESYPYKGVN-GICDFKAENVGVKVLDSVNITLGAEDELKDAVALVR--PVSV 280

Query: 279 GINAV-WMQTYIGGVSCPYICGKY---LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWG 334
               V   + Y  GV     CG     ++H VL VGYG            PYW+IKNSWG
Sbjct: 281 AFQVVNGFRQYKSGVYTSDSCGNTPMDVNHAVLAVGYGVENGV-------PYWLIKNSWG 333

Query: 335 ENWGENGYYKICMGRNVCGVDSMVS 359
            +WG+ GY+K+ MG+N+CGV +  S
Sbjct: 334 ADWGDKGYFKMEMGKNMCGVATCAS 358


>gi|255568297|ref|XP_002525123.1| cysteine protease, putative [Ricinus communis]
 gi|223535582|gb|EEF37250.1| cysteine protease, putative [Ricinus communis]
          Length = 349

 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 123/321 (38%), Positives = 167/321 (52%), Gaps = 25/321 (7%)

Query: 43  EDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLL-DPTAVHGVTKF 101
           E H L        + +K  K Y   +E   RF++FK+N+   +      + + + G+ KF
Sbjct: 29  ELHELEMTGRHEKWMAKHGKVYKDDKEKLRRFQIFKSNVVFIESFNTAGNKSYMLGINKF 88

Query: 102 SDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSC 161
           +DLT  EFR  + G  R L                LP+  DWR  GAVT +KDQG CGSC
Sbjct: 89  ADLTNEEFRAFWNGYKRPLGASRKITPFKYENVTALPSSIDWRSKGAVTPIKDQGVCGSC 148

Query: 162 WSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYIL 221
           W+FSA  A EG H L TG+LVSLSEQ+LVDCD +         D GC GGLM  AF++I 
Sbjct: 149 WAFSAVAATEGIHKLRTGKLVSLSEQELVDCDVKGQ-------DKGCQGGLMVDAFKFIK 201

Query: 222 KAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGIN 281
           + GG+  E +YPY G DG      ++  A  ++ +  +  + +      V + P++V I+
Sbjct: 202 RHGGMTSEANYPYQGRDGKCDTKKEASRAVKITGYQAVPKNSEAALLKAVANQPVSVAID 261

Query: 282 A--VWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGE 339
           A  +  Q Y  G+    ICGK ++HGV  VGYG S           YWI+KNSWG  WGE
Sbjct: 262 AGSLSFQFYRSGIFTG-ICGKDINHGVAAVGYGRSNSGS------KYWIVKNSWGTEWGE 314

Query: 340 NGYYKICMGRNV------CGV 354
            GY  I M R+V      CG+
Sbjct: 315 KGY--IRMKRDVRSKEGLCGI 333


>gi|358339355|dbj|GAA47435.1| cathepsin F [Clonorchis sinensis]
          Length = 1157

 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 113/276 (40%), Positives = 160/276 (57%), Gaps = 21/276 (7%)

Query: 80  NLRRAKRRQLLDP-TAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLP 138
           N+++A+  Q L+  TA++GVT+FSDLT  EF+  FLGL    +            +  +P
Sbjct: 654 NIKQAEFYQTLERGTALYGVTQFSDLTGEEFQETFLGLRLDEQYSKSQSYVKKKHSVSIP 713

Query: 139 TDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDP 198
            ++DWR +GAV  V DQG CGSCW+FS  G +EG  F  TG+LVSLS+QQLVDCD     
Sbjct: 714 ENYDWRPYGAVGPVLDQGHCGSCWAFSVIGNIEGQWFRKTGQLVSLSKQQLVDCDRS--- 770

Query: 199 EESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSV 258
                   GC GG   + ++ I + GG+E E DY YTG D G C  +  K  A V++   
Sbjct: 771 ------SRGCGGGYPPATYDSIRRIGGLEIELDYRYTGRD-GVCHQNPRKFVAYVNSSVA 823

Query: 259 ISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCP---YICGKYLDHGVLIVGYGSSG 315
           ++ DE+ +A  L  HGP+++ +NA  +Q Y+ G+  P   Y   K + H VL VG+G+ G
Sbjct: 824 LTKDENTIAEWLSYHGPISMALNARLLQFYVSGIMHPPAAYCPVKDISHAVLSVGFGTKG 883

Query: 316 FAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNV 351
                    P+WI+KNSWG  WGE GY++I  G ++
Sbjct: 884 -------NVPFWIVKNSWGTLWGEEGYFRIYRGDDM 912



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 90/206 (43%), Positives = 116/206 (56%), Gaps = 21/206 (10%)

Query: 138 PTD-FDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHEC 196
           P D FDWRD+GAV  V DQ  CG+ W+FSA G +EG +F+    L+SLSEQQLVDCD   
Sbjct: 463 PQDSFDWRDYGAVGPVLDQDRCGASWAFSAIGNIEGQYFMRVHRLLSLSEQQLVDCDR-- 520

Query: 197 DPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNF 256
                   D GC GG    AFE I + GG+E E DYPY G    +C+ +  +   +++  
Sbjct: 521 -------IDQGCAGGTPYGAFEGIQQLGGLELEADYPYLGHQ-DNCQSNPLRFVVSINGS 572

Query: 257 SVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYI--CGKY-LDHGVLIVGYGS 313
             +  DEDQ+A  L  HGPL+VGIN   +Q Y  G+  P    C    ++H  L VG+G 
Sbjct: 573 VQLPKDEDQIAQYLFDHGPLSVGINGALLQYYSSGIMQPLWDNCNPAEMNHAGLAVGFGF 632

Query: 314 SGFAPIRFKEKPYWIIKNSWGENWGE 339
                   ++ PYW IKNSWG  WGE
Sbjct: 633 E-------QDVPYWTIKNSWGMLWGE 651



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 85/209 (40%), Positives = 117/209 (55%), Gaps = 15/209 (7%)

Query: 82   RRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRL-RLPADAQKAPILPTNDLPTD 140
            R  + RQL +   ++    +  +  +E    FL L  R  R P+ A    +    ++P  
Sbjct: 947  RELRERQLYEEFKLN----YGKVYENEGMFYFLYLGARFDREPSRAGSMVVDDLGEIPER 1002

Query: 141  FDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEE 200
            FDWR+ GAV  ++DQG CGSCW+FS  G +EG  F  TG+L++LSEQQL+DCD       
Sbjct: 1003 FDWRELGAVGPIQDQGDCGSCWAFSTIGNIEGQWFKKTGQLLTLSEQQLIDCD------- 1055

Query: 201  SGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVIS 260
              S D GC GG     +  I+K GG+E   DYPY   D G CK ++SK  A V+   V+ 
Sbjct: 1056 --SVDDGCGGGYPPDTYGDIVKMGGLELNADYPYIAAD-GVCKMERSKFRAYVNKSLVLP 1112

Query: 261  SDEDQMAANLVKHGPLAVGINAVWMQTYI 289
            + EDQ A  L K+GPL+ GINA ++Q  I
Sbjct: 1113 TKEDQQAVWLSKNGPLSAGINADYLQVVI 1141



 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 84/242 (34%), Positives = 117/242 (48%), Gaps = 44/242 (18%)

Query: 108 EFRRQFLGLNR-RLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSA 166
           EFRR +L         P D  +  +     LP+ FDWR++GAV  V++QG CGSCW+ SA
Sbjct: 190 EFRRLYLTYKSPDEHEPID--RIHVQEVGQLPSYFDWREYGAVGPVRNQGQCGSCWAISA 247

Query: 167 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGV 226
                                ++VDCDH          D GC+GG    A+E + + GG+
Sbjct: 248 ---------------------EVVDCDH---------ADHGCSGGFPIHAYECVQRLGGL 277

Query: 227 EREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQ 286
           E    YPY G     C+ D     A ++    +  D +Q+A  L   GPL+V ++A  +Q
Sbjct: 278 ELAVRYPYVGYQ-QYCQADPRYFVAYINGSVALPKDSEQIAKFLATFGPLSVVLDARLLQ 336

Query: 287 TYIGGVSCP---YICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYY 343
            Y  G+  P   Y   + L+H VL VG+G+        +  PYWIIKNSWGE WGE    
Sbjct: 337 YYRSGILNPSVAYCNPEELNHAVLSVGFGTE-------QGIPYWIIKNSWGEQWGEQHLT 389

Query: 344 KI 345
           K+
Sbjct: 390 KL 391



 Score = 94.0 bits (232), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 53/157 (33%), Positives = 86/157 (54%), Gaps = 20/157 (12%)

Query: 187 QQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDK 246
           QQLVDCDH          D GC GG    AF  + + GG++   DYPY  +   +C+F+ 
Sbjct: 23  QQLVDCDH---------VDRGCEGGFPLDAFMAVQRLGGLQLSIDYPYIASRQ-ACQFNP 72

Query: 247 SKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGV---SCPYICGKYLD 303
            +  A V+ F+ +  +E  +A  L ++GPL+VG+N+  ++ Y  G+   +      + L+
Sbjct: 73  KQAVAFVTGFAALPRNELLIAEYLHRNGPLSVGLNSRTLKFYNSGILNLAAEQCDPEALN 132

Query: 304 HGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGEN 340
           H  L VG+G+        +  P+WIIKN++G++WGE 
Sbjct: 133 HAALAVGFGTD-------ESTPFWIIKNTFGKDWGEQ 162


>gi|356517184|ref|XP_003527269.1| PREDICTED: xylem cysteine proteinase 2-like [Glycine max]
          Length = 350

 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 129/337 (38%), Positives = 184/337 (54%), Gaps = 40/337 (11%)

Query: 39  GEQSEDHLLNAEHHFSLFKSKFS---KTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAV 95
           G  SED L + +    LF+S  S   K Y + EE  +RF +FK NL+    R  +     
Sbjct: 32  GYSSED-LKSMDKLIELFESWISRHGKIYQSIEEKLHRFEIFKDNLKHIDERNKVVSNYW 90

Query: 96  HGVTKFSDLTPSEFRRQFLGL----NRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTG 151
            G+ +F+DL+  EF+ ++LGL    +RR   P +     +    +LP   DWR  GAVT 
Sbjct: 91  LGLNEFADLSHQEFKNKYLGLKVDYSRRRESPEEFTYKDV----ELPKSVDWRKKGAVTQ 146

Query: 152 VKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGG 211
           VK+QG+CGSCW+FS   A+EG + + TG L SLSEQ+L+DCD         + ++GCNGG
Sbjct: 147 VKNQGSCGSCWAFSTVAAVEGINQIVTGNLTSLSEQELIDCDR--------TYNNGCNGG 198

Query: 212 LMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKI-AAAVSNFSVISSDEDQMAANL 270
           LM+ AF +I++  G+ +E+DYPY   + G+C+  K +     +S +  +  + +Q     
Sbjct: 199 LMDYAFSFIVENDGLHKEEDYPYI-MEEGTCEMAKEETEVVTISGYHDVPQNNEQSLLKA 257

Query: 271 VKHGPLAVGINAVW--MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWI 328
           + + PL+V I A     Q Y GGV   + CG  LDHGV  VGYG++       K   Y  
Sbjct: 258 LANQPLSVAIEASGRDFQFYSGGVFDGH-CGSDLDHGVAAVGYGTA-------KGVDYIT 309

Query: 329 IKNSWGENWGENGYYKICMGRN------VCGVDSMVS 359
           +KNSWG  WGE GY  I M RN      +CG+  M S
Sbjct: 310 VKNSWGSKWGEKGY--IRMRRNIGKPEGICGIYKMAS 344


>gi|5777889|emb|CAB53515.1| cysteine protease [Solanum tuberosum]
          Length = 466

 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 125/354 (35%), Positives = 194/354 (54%), Gaps = 38/354 (10%)

Query: 8   SLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKS---KFSKTY 64
           SLLL+L+ S L+SA     D ++I        +++  H  + +   +L++S   +  K+Y
Sbjct: 11  SLLLMLIFSTLSSA----SDMSIISY------DETHIHHRSDDEVSALYESWLIEHGKSY 60

Query: 65  ATQEEHDYRFRVFKANLRRA-KRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNR---RL 120
               E D RF++FK NL+   ++  + + +   G+TKF+DLT  E+R  +LG      R 
Sbjct: 61  NALGEKDKRFQIFKDNLKYIDEQNSVPNQSYKLGLTKFADLTNEEYRSIYLGTKSSGDRR 120

Query: 121 RLPADAQKAPILPTND-LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTG 179
           +L  +     +    D LP   DWRD G + GVKDQG+CGSCW+FSA  A+E  + + TG
Sbjct: 121 KLSKNKSDRYLPKVGDSLPESVDWRDKGVLVGVKDQGSCGSCWAFSAVAAMESINAIVTG 180

Query: 180 ELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDG 239
            L+SLSEQ+LVDCD         S + GC+GGLM+ AFE+++  GG++ E+DYPY   + 
Sbjct: 181 NLISLSEQELVDCDK--------SYNEGCDGGLMDYAFEFVINNGGIDTEEDYPYKERND 232

Query: 240 GSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYI 297
              ++ K+     + ++  +  + ++     V H P+++ I A    +Q Y  G+     
Sbjct: 233 VCDQYRKNAKVVKIDSYEDVPVNNEKALQKAVAHQPVSIAIEAGGRDLQHYKSGIFTGK- 291

Query: 298 CGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNV 351
           CG  +DHGV+  GYGS            YWI++NSWG  WGE GY ++   RNV
Sbjct: 292 CGTAVDHGVVAAGYGSE-------NGMDYWIVRNSWGAKWGEKGYLRV--QRNV 336


>gi|387914010|gb|AFK10614.1| cathepsin L [Callorhinchus milii]
 gi|392873762|gb|AFM85713.1| cathepsin L [Callorhinchus milii]
 gi|392877488|gb|AFM87576.1| cathepsin L [Callorhinchus milii]
          Length = 338

 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 129/321 (40%), Positives = 171/321 (53%), Gaps = 27/321 (8%)

Query: 52  HFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH----GVTKFSDLTPS 107
           H+  +KS   K+Y  +EE  +R  V++ +LR  +   L      H    G+  F D+   
Sbjct: 28  HWEQWKSWHGKSYEQKEE-TWRRMVWEKHLRVIEIHNLEHSLGKHSFRLGMNHFGDMPNE 86

Query: 108 EFRRQFLGLNRRLRLPADAQKAPILPTN--DLPTDFDWRDHGAVTGVKDQGACGSCWSFS 165
           EFR+   G   + +     Q +  L  N  ++P   DWRD G VT VKDQG CGSCW+FS
Sbjct: 87  EFRQLMNGYKYK-QTHKKLQGSHFLEPNFLEVPKHVDWRDEGYVTPVKDQGQCGSCWAFS 145

Query: 166 ATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGG 225
            TGALEG HF  TG+LVSLSEQ LV+C     PE     + GCNGGLM+ AF+Y+   GG
Sbjct: 146 TTGALEGQHFRRTGQLVSLSEQNLVEC---SKPE----GNEGCNGGLMDQAFQYVKDNGG 198

Query: 226 VEREKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVGINA-- 282
           ++ E  YPY GTD   C ++    AA  + F  + S  E  +   +   GP++V I+A  
Sbjct: 199 IDSEDSYPYVGTDDTPCHYNPQYNAANDTGFVDIPSGKERALMKAIAAVGPVSVAIDAGH 258

Query: 283 VWMQTYIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENG 341
              Q Y  G+     C    LDHGVL+VGY   G        K YWI+KNSW E WG+NG
Sbjct: 259 TSFQFYQSGIYFEAECSSTDLDHGVLVVGY---GVEKRDTDGKKYWIVKNSWSEKWGQNG 315

Query: 342 YYKICMGR---NVCGVDSMVS 359
           Y  I M +   N CG+ +  S
Sbjct: 316 Y--ILMAKDKDNHCGIATAAS 334


>gi|158300877|ref|XP_001689282.1| AGAP011828-PA [Anopheles gambiae str. PEST]
 gi|157013372|gb|EDO63348.1| AGAP011828-PA [Anopheles gambiae str. PEST]
          Length = 344

 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 128/327 (39%), Positives = 170/327 (51%), Gaps = 34/327 (10%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRR-AKRRQLLDPTAVH---GVTKFSDLTPSE 108
           ++ FK +  K Y ++ E   R +++  N  + AK  Q  D         V K++DL   E
Sbjct: 28  WTAFKLQHRKKYDSETEERIRMKIYVQNKHKIAKHNQRYDLGQEKFRLRVNKYADLLHEE 87

Query: 109 FRRQFLGLNRRLR----------LPADAQKAPILPTN-DLPTDFDWRDHGAVTGVKDQGA 157
           F     G NR +            P +     I P N D+PT  DWR  GAVT VKDQG 
Sbjct: 88  FVHTLNGFNRSVSGKGQLLRGELKPIEEPVTWIEPANVDVPTAMDWRTKGAVTQVKDQGH 147

Query: 158 CGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAF 217
           CGSCWSFSATGALEG HF  TG+LVSLSEQ LVDC  +         ++GCNGG+M+ AF
Sbjct: 148 CGSCWSFSATGALEGQHFRKTGKLVSLSEQNLVDCSQKYG-------NNGCNGGMMDFAF 200

Query: 218 EYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPL 276
           +YI    G++ EK YPY   D   C ++   + A    F  +   +E  +   L   GP+
Sbjct: 201 QYIKDNKGIDTEKSYPYEAID-DECHYNPKAVGATDKGFVDIPQGNEKALMKALATVGPV 259

Query: 277 AVGINAVW--MQTYIGGVSCPYIC-GKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSW 333
           +V I+A     Q Y  GV     C  + LDHGVL VGYG++         + YW++KNSW
Sbjct: 260 SVAIDASHESFQFYSEGVYYEPQCDSEQLDHGVLAVGYGTTEDG------EDYWLVKNSW 313

Query: 334 GENWGENGYYKICMGR-NVCGVDSMVS 359
           G  WG+ GY K+   R N CG+ +  S
Sbjct: 314 GTTWGDQGYVKMARNRDNHCGIATTAS 340


>gi|302781881|ref|XP_002972714.1| hypothetical protein SELMODRAFT_98707 [Selaginella moellendorffii]
 gi|300159315|gb|EFJ25935.1| hypothetical protein SELMODRAFT_98707 [Selaginella moellendorffii]
          Length = 446

 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 124/335 (37%), Positives = 181/335 (54%), Gaps = 38/335 (11%)

Query: 42  SEDHLLNAEHHFSLFKSKFSKTYATQEE-HDYRFRVFKANLRRAKRRQLLDPTAVH-GVT 99
           S D  L+ E  ++ + +KF K  A+     D RF  FK N R  +        +   G+ 
Sbjct: 4   SSDSDLSGE--YASWCAKFGKECASSNSLGDRRFETFKENFRYIEEHNRAGKHSYRLGLN 61

Query: 100 KFSDLTPSEFRRQFLGLNRRL------RLPADAQKAPILPTNDLPTDFDWRDHGAVTGVK 153
           +FSDLT  EFR++FLGL   L      ++P D+         DLP   DWR HGAVT  K
Sbjct: 62  QFSDLTSEEFRQRFLGLRPDLIDSPVLKMPRDSDIEEGFQNVDLPASVDWRKHGAVTAPK 121

Query: 154 DQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLM 213
           DQG+CG CW+F+ TGA+EG + + TG+L+SLSEQ+L+DCD +         D GC+GGLM
Sbjct: 122 DQGSCGGCWAFATTGAIEGINQIVTGQLMSLSEQELIDCDKK--------ADKGCDGGLM 173

Query: 214 NSAFEYILKAGGVEREKDYPYTGTDGGSCKFDK-SKIAAAVSNFSVISSDEDQMAANLVK 272
            +A+++I++ GG++ E DYPY  ++   C   K +    A+  +  I   ++Q     V 
Sbjct: 174 ENAYQFIVENGGLDTETDYPYHASE-SHCNMKKLNSRVVAIDGYEAIPDGDEQALLRAVA 232

Query: 273 HGPLAVGINAVW--MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIK 330
             P++V I       Q Y  GV   + CG+ ++HGVLIVGYG+            YWI+K
Sbjct: 233 KQPVSVAIEGASKDFQHYASGVFTGH-CGEEINHGVLIVGYGTE-------DGLDYWIVK 284

Query: 331 NSWGENWGENGYYKICMGRN------VCGVDSMVS 359
           NSW   WG+ G+ K  M RN      +C ++++ S
Sbjct: 285 NSWAATWGDGGFVK--MQRNTGKRGGLCSINTLAS 317


>gi|328869030|gb|EGG17408.1| cysteine protease [Dictyostelium fasciculatum]
          Length = 379

 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 131/342 (38%), Positives = 186/342 (54%), Gaps = 52/342 (15%)

Query: 59  KFSKTYATQEEHDY--RFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLG- 115
           +F K+Y   E  D+  RF VFK N+             V  + +F+D+T  E+RR +LG 
Sbjct: 45  RFEKSY---ESFDFLQRFAVFKTNMDYVHEWNSKKLPTVLELNQFADITNQEYRRLYLGT 101

Query: 116 -LNRR--LRLPADAQKA----PILPTNDLPTD---FDWRDHGAVTGVKDQGACGSCWSFS 165
            +N R  L  P   + +     +   +D  +     DWR  GAV+ +K+QG CGSCWSFS
Sbjct: 102 RINARHLLGTPGTHEMSNNFGKVFGDDDSDSSGATVDWRAKGAVSPIKNQGQCGSCWSFS 161

Query: 166 ATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGS-CDSGCNGGLMNSAFEYILKAG 224
            TG++EGAH++STG++V LSEQ LVDC        SGS  + GC GGLMN AF+YI+K  
Sbjct: 162 TTGSVEGAHYISTGKMVPLSEQNLVDC--------SGSEGNMGCQGGLMNLAFDYIIKNE 213

Query: 225 GVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKH-GPLAVGINAV 283
           G++ E  YPY+   G  C F+K+ + A +S++  I+S ++   A+ VK+ GP++V I+A 
Sbjct: 214 GIDTEDSYPYSAETGKKCLFNKTNVGATISSYKNITSGDESNLADAVKNAGPVSVAIDAS 273

Query: 284 W--MQTYIGGVSCPYICGKY-LDHGVLIVGYGS-------------SGFAPIRFKEK--- 324
               Q Y  G+     C    LDHGVL+VGYGS             SG   + F  +   
Sbjct: 274 HNSFQLYSHGIYYEKDCSSVNLDHGVLVVGYGSGDPSSLANNVGGRSGPKMVVFNNRMVK 333

Query: 325 ------PYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVS 359
                  YWI+KNSWG  WG +G+  + M R N CG+ +  S
Sbjct: 334 TPSSNGDYWIVKNSWGSTWGSHGFIFMSMNRDNNCGIATSAS 375


>gi|312281697|dbj|BAJ33714.1| unnamed protein product [Thellungiella halophila]
          Length = 347

 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 118/314 (37%), Positives = 169/314 (53%), Gaps = 28/314 (8%)

Query: 43  EDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP--TAVHGVTK 100
           +D+ L  +     + +K  + YA  +E + R+ VFK N+ R +R   +    T    V +
Sbjct: 29  DDNELIMQKRHDEWMAKHGRVYADMKEKNNRYVVFKRNVERIERLNNVPAGRTFKLAVNQ 88

Query: 101 FSDLTPSEFRRQFLG------LNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKD 154
           F+DLT  EFR  + G      L+ +      + +   + +  LP   DWR  GAVT +K+
Sbjct: 89  FADLTNDEFRSMYTGYKGGSVLSSQSGTKTSSFRYQNVSSGALPVSVDWRKKGAVTPIKN 148

Query: 155 QGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMN 214
           QG CG CW+FSA  A+EGA  +  G+L+SLSEQQLVDCD           D GC+GGLM+
Sbjct: 149 QGTCGCCWAFSAVAAIEGATKIKKGKLISLSEQQLVDCDTN---------DFGCSGGLMD 199

Query: 215 SAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSK-IAAAVSNFSVISSDEDQMAANLVKH 273
           +AFE+I+  GG+  E +YPY G D  +CK   +K  A +++ +  +  ++++     V H
Sbjct: 200 TAFEHIMATGGLTTESNYPYKGKD-ATCKIKNTKPTATSITGYEDVPVNDEKALMKAVAH 258

Query: 274 GPLAVGIN--AVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKN 331
            P+++GI       Q Y  GV     C  YLDH V  VGYG S           YWIIKN
Sbjct: 259 QPVSIGIEGGGFDFQFYGSGVFTGE-CTTYLDHAVTAVGYGQSSNGS------KYWIIKN 311

Query: 332 SWGENWGENGYYKI 345
           SWG  WGE+GY +I
Sbjct: 312 SWGTKWGESGYMRI 325


>gi|115461667|ref|NP_001054433.1| Os05g0108600 [Oryza sativa Japonica Group]
 gi|14719319|gb|AAK73137.1|AC079022_10 putative cysteine proteinase [Oryza sativa]
 gi|33151125|gb|AAP97431.1| cysteine protease CP1 [Oryza sativa]
 gi|52353572|gb|AAU44138.1| cysteine proteinase CP1 [Oryza sativa Japonica Group]
 gi|113577984|dbj|BAF16347.1| Os05g0108600 [Oryza sativa Japonica Group]
 gi|125550541|gb|EAY96250.1| hypothetical protein OsI_18148 [Oryza sativa Indica Group]
          Length = 358

 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 124/334 (37%), Positives = 178/334 (53%), Gaps = 34/334 (10%)

Query: 42  SEDHLLNAEHHFSLFK---SKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGV 98
           SE+ L + +    LF+   +K+ K YA+ EE   RF VFK NL           +   G+
Sbjct: 37  SEEDLASHDRLIELFEKWVAKYRKAYASFEEKVRRFEVFKDNLNHIDDINKKVTSYWLGL 96

Query: 99  TKFSDLTPSEFRRQFLGL------NRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGV 152
            +F+DLT  EF+  +LGL      +      ++  +   +   ++P + DWR   AVT V
Sbjct: 97  NEFADLTHDEFKATYLGLTPPPTRSNSKHYSSEEFRYGKMSNGEVPKEMDWRKKNAVTEV 156

Query: 153 KDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGL 212
           K+QG CGSCW+FS   A+EG + + TG L SLSEQ+L+DC        S   ++GCNGGL
Sbjct: 157 KNQGQCGSCWAFSTVAAVEGINAIVTGNLTSLSEQELIDC--------STDGNNGCNGGL 208

Query: 213 MNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVK 272
           M+ AF YI   GG+  E+ YPY   + G C   K      +S +  + ++++Q     + 
Sbjct: 209 MDYAFSYIASTGGLRTEEAYPYA-MEEGDCDEGKGAAVVTISGYEDVPANDEQALVKALA 267

Query: 273 HGPLAVGINAV--WMQTYIGGV-SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWII 329
           H P++V I A     Q Y GGV   P  CG+ LDHGV  VGYG+S       K + Y I+
Sbjct: 268 HQPVSVAIEASGRHFQFYSGGVFDGP--CGEQLDHGVTAVGYGTS-------KGQDYIIV 318

Query: 330 KNSWGENWGENGYYKI----CMGRNVCGVDSMVS 359
           KNSWG +WGE GY ++      G  +CG++ M S
Sbjct: 319 KNSWGPHWGEKGYIRMKRGTGKGEGLCGINKMAS 352


>gi|126681066|gb|ABO26562.1| cathepsin L-like cysteine protease [Ixodes ricinus]
          Length = 335

 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 127/331 (38%), Positives = 173/331 (52%), Gaps = 30/331 (9%)

Query: 42  SEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRR-AKRRQLLDPTAV---HG 97
           S   +L AE  +S FK+K  K+Y ++ E  +R +++  N  + AK  +      V     
Sbjct: 18  SYQEVLGAE--WSAFKAKHGKSYVSETEEVFRLKIYMENRHKIAKHNEKYARGEVPYSMA 75

Query: 98  VTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTN----DLPTDFDWRDHGAVTGVK 153
           + +F D+   EF     G  R  +         + P N     LP   DWR  GAVT VK
Sbjct: 76  MNEFGDMLHHEFVSTRNGFKRNYKDQPREGSTYLEPENIEDFSLPKTVDWRTKGAVTPVK 135

Query: 154 DQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLM 213
           +QG CGSCW+FSATG+LEG HF  +G +VSLSEQ LV C  +         ++GC GGLM
Sbjct: 136 NQGQCGSCWAFSATGSLEGQHFRKSGSMVSLSEQNLVGCSTDFG-------NNGCEGGLM 188

Query: 214 NSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVK 272
           + AF+YI    G++ EK YPY GTD G+C F KS + A  S F  +    E Q+   +  
Sbjct: 189 DDAFKYIRANKGIDTEKSYPYNGTD-GTCHFKKSTVGATDSGFVDIKEGSETQLKKAVAT 247

Query: 273 HGPLAVGINAVW--MQTYIGGV-SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWII 329
            GP++V I+A     Q Y  GV   P    + LDHGVL+VGYG+            YW +
Sbjct: 248 VGPISVAIDASHESFQFYSDGVYDEPECDSESLDHGVLVVGYGT-------LNGTDYWFV 300

Query: 330 KNSWGENWGENGYYKICMG-RNVCGVDSMVS 359
           KNSWG  WG+ GY ++    +N CG+ S  S
Sbjct: 301 KNSWGTTWGDEGYIRMSRNKKNQCGIASSAS 331


>gi|146215980|gb|ABQ10192.1| actinidin Act2a [Actinidia deliciosa]
          Length = 378

 Score =  202 bits (515), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 123/357 (34%), Positives = 188/357 (52%), Gaps = 38/357 (10%)

Query: 11  LLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEH 70
           LL  S++L  + A++ ++++ R         + D ++     +  +  +  K+Y + +E 
Sbjct: 12  LLFFSTLLILSSAIDIENSVQR---------TNDQVM---AMYESWLVEHGKSYNSLDEK 59

Query: 71  DYRFRVFKANLRRAKRRQL-LDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKA 129
           + RF +FK NLR         + +   G+ +F+DLT  E+R  +LGL R  +     Q  
Sbjct: 60  EMRFEIFKENLRIIDDHNADANRSYSLGLNRFADLTDEEYRSTYLGLKRGPKTDVSNQYM 119

Query: 130 PILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQL 189
           P +  + LP   DWR  GAV GVK+QG C SCW+FSA  A+EG + + TG L+SLSEQ+L
Sbjct: 120 PKV-GDALPDYVDWRTVGAVVGVKNQGLCSSCWAFSAVAAVEGINKIVTGNLISLSEQEL 178

Query: 190 VDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKI 249
           VDC              GCN GLM  AF++I+  GG+  E +YPYT  DG      K++ 
Sbjct: 179 VDCGRT-------QITKGCNRGLMTDAFKFIINNGGINTENNYPYTAKDGQCNLSLKNQK 231

Query: 250 AAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKYLDHGVL 307
              + ++  + S+ +      V + P++VG+ +     + Y  G+     CG  +DHGV 
Sbjct: 232 YVTIDSYKNVPSNNEMALKKAVAYQPVSVGVESEGGKFKLYTSGIFTGS-CGTAVDHGVT 290

Query: 308 IVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNV-----CGVDSMVS 359
           IVGYG+        +   YWI+KNSWG NWGE+GY +I   RN+     CG+  M S
Sbjct: 291 IVGYGTE-------RGMDYWIVKNSWGTNWGESGYIRI--QRNIGGAGKCGIAKMPS 338


>gi|34559455|gb|AAQ75437.1| cathepsin L-like protease [Helicoverpa armigera]
 gi|338855117|gb|AEJ31938.1| cathepsin L-like protease [Helicoverpa assulta]
          Length = 341

 Score =  202 bits (515), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 128/325 (39%), Positives = 176/325 (54%), Gaps = 32/325 (9%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRR-AKRRQLLDPTAVH---GVTKFSDLTPSE 108
           +S FK + SK Y ++ E  +R +++  N  R AK  Q  +  AV       K++D+   E
Sbjct: 27  WSAFKLEHSKRYDSEVEDKFRMKIYLENKHRIAKHNQRFEQGAVSYKLRPNKYADMLSHE 86

Query: 109 FRRQFLGLNRRLRLPADA-----QKAP---ILPTN-DLPTDFDWRDHGAVTGVKDQGACG 159
           F     G N+ L+ P        +  P   I P +   P   DWR  GAVT VKDQG CG
Sbjct: 87  FVHVMNGFNKTLKHPKAVHGKGRESRPATFIAPAHVTYPDHVDWRKKGAVTEVKDQGKCG 146

Query: 160 SCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEY 219
           SCW+FS TGALEG HF  TG LVSLSEQ L+DC        +   ++GCNGGLM++AF+Y
Sbjct: 147 SCWAFSTTGALEGQHFRKTGYLVSLSEQNLIDC-------SAAYGNNGCNGGLMDNAFKY 199

Query: 220 ILKAGGVEREKDYPYTGTDGGSCKFD-KSKIAAAVSNFSVISSDEDQMAANLVKHGPLAV 278
           I   GG++ EK YPY G D   C+++ K+  A  V    +   DE+++   +   GP++V
Sbjct: 200 IKDNGGIDTEKAYPYEGVD-DKCRYNAKNSGADDVGFVDIPQGDEEKLMQAVATVGPVSV 258

Query: 279 GINAVW--MQTYIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGE 335
            I+A     Q Y  GV     C    LDHGV++VGYG+        +   YW++KNSWG 
Sbjct: 259 AIDASQESFQFYSDGVYYDENCSSTDLDHGVMVVGYGTDE------QGGDYWLVKNSWGR 312

Query: 336 NWGENGYYKICMGRNV-CGVDSMVS 359
            WG+ GY K+   +N  CG+ S  S
Sbjct: 313 TWGDLGYIKMARNKNNHCGIASSAS 337


>gi|238006338|gb|ACR34204.1| unknown [Zea mays]
          Length = 465

 Score =  202 bits (515), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 122/326 (37%), Positives = 176/326 (53%), Gaps = 41/326 (12%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLR--RAKRRQLLDPTAVHGVTKFSDLTPSEFR 110
           + L+ ++  + Y    E D RFRVF  NLR   A   +  +     G+ +F+DLT  EFR
Sbjct: 52  YELWLAEHGRAYNALGERDRRFRVFWDNLRFVDAHNERAAEHGFRLGMNQFADLTNDEFR 111

Query: 111 RQFLGLNRRLRLPADAQKAPILP--------TNDLPTDFDWRDHGAVTGVKDQGACGSCW 162
             +LG     R+PA  ++   +           +LP   DWR+ GAV  VK+QG CGSCW
Sbjct: 112 AAYLGA----RIPASRRRGTAVGERYRHGGGAEELPESVDWREKGAVAPVKNQGQCGSCW 167

Query: 163 SFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK 222
           +FSA  ++E  + + TGE+V+LSEQ+LV+C  +         +SGCNGGLM++AF++I+K
Sbjct: 168 AFSAVSSVESVNQIVTGEMVTLSEQELVECSTD-------GGNSGCNGGLMDAAFDFIIK 220

Query: 223 AGGVEREKDYPYTGTDGGSCKFDKSKI-AAAVSNFSVISSDEDQMAANLVKHGPLAVGIN 281
            GG++ E DYPY   D G C  ++      ++  F  +  ++++     V H P++V I 
Sbjct: 221 NGGIDTEGDYPYKAVD-GKCDINRENAKVVSIDGFEDVPENDEKSLQKAVAHQPVSVAIE 279

Query: 282 A--VWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGE 339
           A     Q Y  GV     C   LDHGV+ VGYG+          K YWI++NSWG  WGE
Sbjct: 280 AGGREFQLYKAGVF-TGTCTTNLDHGVVAVGYGTE-------NGKDYWIVRNSWGAKWGE 331

Query: 340 NGYYKICMGRNV------CGVDSMVS 359
           +GY +  M RNV      CG+  M S
Sbjct: 332 DGYIR--MERNVNATTGKCGIAMMAS 355


>gi|157278115|ref|NP_001098156.1| cathepsin L precursor [Oryzias latipes]
 gi|50251128|dbj|BAD27581.1| cathepsin L [Oryzias latipes]
          Length = 336

 Score =  202 bits (515), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 130/321 (40%), Positives = 171/321 (53%), Gaps = 24/321 (7%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH----GVTKFSDLT 105
           + H+ L+K   SK Y  +EE  +R  V++ NLR+ +   L      H    G+  F D+T
Sbjct: 25  DQHWQLWKGWHSKNYHEKEE-GWRRLVWEKNLRKIELHNLEHSMGKHSYRLGMNHFGDMT 83

Query: 106 PSEFRRQFLGLNRRLRLPADAQKAPILPTNDL--PTDFDWRDHGAVTGVKDQGACGSCWS 163
             EFR+   G  RR +       +  +  N L  P   DWRD G VT VKDQG CGSCW+
Sbjct: 84  HEEFRQIMNGYKRREQRKYSG--SLFMEPNFLEAPRAVDWRDKGYVTPVKDQGQCGSCWA 141

Query: 164 FSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA 223
           FS TGALEG  F  TG+LVSLSEQ LVDC     PE     + GCNGGLM+ AF+Y+   
Sbjct: 142 FSTTGALEGQQFRKTGKLVSLSEQNLVDCSR---PE----GNEGCNGGLMDQAFQYVKDN 194

Query: 224 GGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKH-GPLAVGINA 282
            G++ E  YPY GTD   C+++    A   + F  I S +++     V   GP++V I+A
Sbjct: 195 QGLDSEDFYPYKGTDDQPCQYNAQYSAVNDTGFVDIPSGKERALMKAVASVGPVSVAIDA 254

Query: 283 --VWMQTYIGGVSCPYICGK-YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGE 339
                Q Y  G+     C    LDHGVL+VGY   GF       K YWI+KNSW E WG+
Sbjct: 255 GHESFQFYQSGIYFEKECSSDELDHGVLVVGY---GFEGEDVDGKKYWIVKNSWSEKWGD 311

Query: 340 NGYYKICMGR-NVCGVDSMVS 359
            G+  +   R N CG+ +  S
Sbjct: 312 KGFIYMAKDRHNHCGIATAAS 332


>gi|359806985|ref|NP_001241331.1| uncharacterized protein LOC100811719 precursor [Glycine max]
 gi|255645733|gb|ACU23360.1| unknown [Glycine max]
          Length = 362

 Score =  202 bits (515), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 125/328 (38%), Positives = 180/328 (54%), Gaps = 47/328 (14%)

Query: 44  DHLLNAEHHFSLFKS---KFSKTYATQEEHDYRFRVFKANLR-----RAKRRQLLDPTAV 95
           +   + E  F LF++   +  + Y  QEE   RF++F++NLR      AKR+    PT  
Sbjct: 33  EQFASEEEVFQLFQAWQKEHKREYGNQEEKAKRFQIFQSNLRYINEMNAKRK---SPTTQ 89

Query: 96  H--GVTKFSDLTPSEFRRQFLGLNRRLRLP-------ADAQKAPILPTNDLPTDFDWRDH 146
           H  G+ KF+D++P EF + +L   + + +P          QK      ++LP   DWRD 
Sbjct: 90  HRLGLNKFADMSPEEFMKTYL---KEIEMPYSNLESRKKLQKGDDADCDNLPHSVDWRDK 146

Query: 147 GAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDS 206
           GAVT V+DQG C S W+FS TGA+EG + + TG LVSLS QQ+VDCD             
Sbjct: 147 GAVTEVRDQGKCQSHWAFSVTGAIEGINKIVTGNLVSLSVQQVVDCD---------PASH 197

Query: 207 GCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQM 266
           GC GG   +AF Y+++ GG++ E  YPYT  + G+CK + +K+  ++ N  V+   E+ +
Sbjct: 198 GCAGGFYFNAFGYVIENGGIDTEAHYPYTAQN-GTCKANANKV-VSIDNLLVVVGPEEAL 255

Query: 267 AANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGV---LIVGYGSSGFAPIRFKE 323
              + K  P++V I+A  +Q Y GGV     C K         LIVGYGS G        
Sbjct: 256 LCRVSKQ-PVSVSIDATGLQFYAGGVYGGENCSKNSTKATLVCLIVGYGSVG-------G 307

Query: 324 KPYWIIKNSWGENWGENGYYKICMGRNV 351
           + YWI+KNSWG++WGE GY  + + RNV
Sbjct: 308 EDYWIVKNSWGKDWGEEGY--LLIKRNV 333


>gi|410519429|gb|AFV73398.1| cathepsin L [Haliotis discus hannai]
          Length = 326

 Score =  202 bits (515), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 119/319 (37%), Positives = 165/319 (51%), Gaps = 24/319 (7%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH----GVTKFSDLT 105
           +  + +FK + +K Y   +E  YR  VF   +   ++  L     VH    G+ +++D+ 
Sbjct: 19  DREWGMFKVRHNKQYKDNQEEAYRKGVFMKAVEYIQQHNLEADRGVHSFRVGINEYADMP 78

Query: 106 PSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFS 165
             EF R   G   + + P      P     DLP   DWR  G VT VK+QG CGSCW+FS
Sbjct: 79  NEEFVRVMNGYKMQEQRPKAPTYMPPSNVGDLPATVDWRTKGYVTEVKNQGQCGSCWAFS 138

Query: 166 ATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGG 225
           +TG+LEG  F    +L+SLSEQ LVDC  E         + GC GGLM+ AF YI    G
Sbjct: 139 STGSLEGQTFKKYNKLISLSEQNLVDCSTE-------QGNMGCGGGLMDQAFTYIKVNDG 191

Query: 226 VEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVI-SSDEDQMAANLVKHGPLAVGINAVW 284
           ++ E  YPY     G C+F+K+ + A  + ++ I S  E  + + +   GP+AV I+A  
Sbjct: 192 IDTETSYPYEAAS-GKCRFNKANVGANDTGYTDIKSKSESDLQSAVATVGPIAVAIDASH 250

Query: 285 M--QTYIGGVSCPYICGK-YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENG 341
           M  Q Y  GV     C +  LDHGVL VGYG+          K YW++KNSWG  WG+ G
Sbjct: 251 MSFQLYKSGVYHYIFCSQTRLDHGVLAVGYGTD-------SGKDYWLVKNSWGATWGQQG 303

Query: 342 YYKICMGR-NVCGVDSMVS 359
           Y  +   R N CG+ +  S
Sbjct: 304 YIMMSRNRDNNCGIATQAS 322


>gi|392884266|gb|AFM90965.1| cathepsin L [Callorhinchus milii]
          Length = 338

 Score =  202 bits (515), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 129/321 (40%), Positives = 171/321 (53%), Gaps = 27/321 (8%)

Query: 52  HFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH----GVTKFSDLTPS 107
           H+  +KS   K+Y  +EE  +R  V++ +LR  +   L      H    G+  F D+   
Sbjct: 28  HWEQWKSWHGKSYEQKEE-TWRRMVWEEHLRVIEIHNLEHSLGKHSFRLGMNHFGDMPNE 86

Query: 108 EFRRQFLGLNRRLRLPADAQKAPILPTN--DLPTDFDWRDHGAVTGVKDQGACGSCWSFS 165
           EFR+   G   + +     Q +  L  N  ++P   DWRD G VT VKDQG CGSCW+FS
Sbjct: 87  EFRQLMNGYKYK-QTHKKLQGSHFLEPNFLEVPKHVDWRDEGYVTPVKDQGQCGSCWAFS 145

Query: 166 ATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGG 225
            TGALEG HF  TG+LVSLSEQ LV+C     PE     + GCNGGLM+ AF+Y+   GG
Sbjct: 146 TTGALEGQHFRRTGQLVSLSEQNLVEC---SKPE----GNEGCNGGLMDQAFQYVKDNGG 198

Query: 226 VEREKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVGINA-- 282
           ++ E  YPY GTD   C ++    AA  + F  + S  E  +   +   GP++V I+A  
Sbjct: 199 IDSEDSYPYVGTDDTPCHYNPQYNAANDTGFVDIPSGKERALMKAIAAVGPVSVAIDAGH 258

Query: 283 VWMQTYIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENG 341
              Q Y  G+     C    LDHGVL+VGY   G        K YWI+KNSW E WG+NG
Sbjct: 259 TSFQFYQSGIYFEAECSSTDLDHGVLVVGY---GVEKRDTDGKKYWIVKNSWSEKWGQNG 315

Query: 342 YYKICMGR---NVCGVDSMVS 359
           Y  I M +   N CG+ +  S
Sbjct: 316 Y--ILMAKDKDNHCGIATAAS 334


>gi|157093355|gb|ABV22332.1| cysteine protease 1 [Noctiluca scintillans]
          Length = 338

 Score =  202 bits (515), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 138/352 (39%), Positives = 180/352 (51%), Gaps = 49/352 (13%)

Query: 13  LLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDY 72
           + SS +A+AV V    A   +V P       D+++     F+ FK+K+ K Y    E   
Sbjct: 1   MKSSCIAAAVLV----AAGHEVPP------PDYMM----MFNNFKTKYGKVYNGINEDAV 46

Query: 73  RFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKA-PI 131
           RF +FKAN+         + T   GV +F+DLT  E    + GL      PA      P 
Sbjct: 47  RFGIFKANVDIIYATNARNLTFALGVNEFTDLTQEELAASYTGLK-----PASLWSGLPR 101

Query: 132 LPTND-----LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSE 186
           L T++     L +  DW   G VT VK+QG CGSCWSFS TGALEGA  LSTG LVSLSE
Sbjct: 102 LSTHEYNGAPLASSVDWTTQGVVTPVKNQGQCGSCWSFSTTGALEGAWALSTGNLVSLSE 161

Query: 187 QQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDK 246
           QQ VDCD         + DSGCNGG M++AF +  K   +  E  YPYT TD G+C    
Sbjct: 162 QQFVDCD---------TTDSGCNGGWMDNAFSFA-KKNSICTEGSYPYTATD-GTCNLSG 210

Query: 247 SKIA---AAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSCPYICGKY 301
            ++      V  ++ +S+D +Q   + V   P+++ I A     Q Y  GV     CG  
Sbjct: 211 CQVGIPQGGVVGYTDVSTDSEQAMMSAVAQQPVSIAIEADQYSFQLYSSGV-LTASCGTR 269

Query: 302 LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCG 353
           LDHGVL VGYGS            YW +KNSWG +WGE GY ++  G+   G
Sbjct: 270 LDHGVLAVGYGSE-------AGTDYWKVKNSWGSSWGEQGYVRLQRGKGGAG 314


>gi|37780039|gb|AAP32192.1| cysteine protease 14 [Trifolium repens]
          Length = 351

 Score =  202 bits (515), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 133/362 (36%), Positives = 190/362 (52%), Gaps = 31/362 (8%)

Query: 7   SSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYAT 66
           S  L+L  S  L  ++A   D +++     S+  +S D L+     F  + S+  K Y T
Sbjct: 6   SKTLVLTCSLCLFLSLAFGRDFSIVG--YSSEDLKSMDKLIEL---FESWMSRHGKIYET 60

Query: 67  QEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRL--RLPA 124
            EE   RF VFK NL+    R  +      G+ +F+DL+  EF+ ++LGL   L  R  +
Sbjct: 61  IEEKLLRFEVFKDNLKHIDDRNKIVSNYWLGLNEFADLSHQEFKNKYLGLKVDLSQRRES 120

Query: 125 DAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSL 184
             ++       DLP   DWR  GAVT VK+QG CGSCW+FS   A+EG + + TG L SL
Sbjct: 121 SNEEEFTYRDVDLPKSVDWRKKGAVTPVKNQGQCGSCWAFSTVAAVEGINQIVTGNLTSL 180

Query: 185 SEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKF 244
           SEQ+L+DCD         + ++GCNGGLM+ AF +I + GG+ +E+DYPY   +  +C+ 
Sbjct: 181 SEQELIDCDT--------TYNNGCNGGLMDYAFSFIGQNGGLHKEEDYPYI-MEESTCEM 231

Query: 245 DKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKY 301
            K +      N +  +  + +Q     + + PL+V I A     Q Y GGV   + CG  
Sbjct: 232 KKEETQVVTINGYHDVPQNNEQSLLKALANQPLSVAIEASSRDFQFYSGGVFDGH-CGSD 290

Query: 302 LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYK----ICMGRNVCGVDSM 357
           LDHGV  VGYG+S       K   Y I+KNSWG  WGE G+ +    I     +CG+  M
Sbjct: 291 LDHGVSAVGYGTS-------KNLDYIIVKNSWGAKWGEKGFIRMKRDIGKPEGICGLYKM 343

Query: 358 VS 359
            S
Sbjct: 344 AS 345


>gi|220983358|dbj|BAH11164.1| cysteine protease [Hordeum vulgare]
          Length = 462

 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 120/323 (37%), Positives = 172/323 (53%), Gaps = 34/323 (10%)

Query: 39  GEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH-- 96
           GE+SE+ +      ++ + ++   TY    E + RF  F+ NLR   +        VH  
Sbjct: 31  GERSEEEV---RRMYAEWMAEHHSTYNPIGEEERRFEAFRNNLRYIDQHNAAADAGVHSF 87

Query: 97  --GVTKFSDLTPSEFRRQFLGL----NRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVT 150
             G+ +F+DLT  E+R  +LG     +R  +L A  Q A     ++LP   DWR  GAV 
Sbjct: 88  RLGLNRFADLTNEEYRSTYLGARTKPDRERKLSARYQAAD---NDELPESVDWRKKGAVG 144

Query: 151 GVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNG 210
            VKDQG CGSCW+FSA  A+EG + + TG+++ LSEQ+LVDCD         S + GCNG
Sbjct: 145 AVKDQGGCGSCWAFSAIAAVEGINQIVTGDMIPLSEQELVDCDT--------SYNQGCNG 196

Query: 211 GLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANL 270
           GLM+ AFE+I+  GG++ E+DYPY   D       K+     +  +  +  + ++     
Sbjct: 197 GLMDYAFEFIINNGGIDSEEDYPYKERDNRCDANKKNAKVVTIDGYEDVPVNSEKSLQKA 256

Query: 271 VKHGPLAVGINA--VWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWI 328
           V + P++V I A     Q Y  G+     CG  LDHGV  VGYG+          K YW+
Sbjct: 257 VANQPISVAIEAGGRAFQLYKSGIFTG-TCGTALDHGVAAVGYGTE-------NGKDYWL 308

Query: 329 IKNSWGENWGENGYYKICMGRNV 351
           ++NSWG  WGENGY +  M RN+
Sbjct: 309 VRNSWGSVWGENGYIR--MERNI 329


>gi|194352754|emb|CAQ00105.1| papain-like cysteine proteinase [Hordeum vulgare subsp. vulgare]
 gi|326513690|dbj|BAJ87864.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326514532|dbj|BAJ96253.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 463

 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 120/327 (36%), Positives = 174/327 (53%), Gaps = 34/327 (10%)

Query: 35  VPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTA 94
           + S GE+SE+ +      ++ + ++   TY    E + RF  F+ NLR   +        
Sbjct: 28  IVSYGERSEEEV---RRMYAEWMAEHGSTYNAIGEEERRFEAFRDNLRYIDQHNAAADAG 84

Query: 95  VH----GVTKFSDLTPSEFRRQFLGL----NRRLRLPADAQKAPILPTNDLPTDFDWRDH 146
           VH    G+ +F+DLT  E+R  +LG     +R  +L A  Q A     ++LP   DWR  
Sbjct: 85  VHSFRLGLNRFADLTNEEYRSTYLGARTKPDRERKLSARYQAAD---NDELPESVDWRKK 141

Query: 147 GAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDS 206
           GAV  VKDQG CGSCW+FSA  A+EG + + TG+++ LSEQ+LVDCD         S + 
Sbjct: 142 GAVGAVKDQGGCGSCWAFSAIAAVEGINQIVTGDMIPLSEQELVDCDT--------SYNQ 193

Query: 207 GCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQM 266
           GCNGGLM+ AFE+I+  GG++ E+DYPY   D       K+     +  +  +  + ++ 
Sbjct: 194 GCNGGLMDYAFEFIINNGGIDSEEDYPYKERDNRCDANKKNAKVVTIDGYEDVPVNSEKS 253

Query: 267 AANLVKHGPLAVGINA--VWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEK 324
               V + P++V I A     Q Y  G+     CG  LDHGV  VGYG+          K
Sbjct: 254 LQKAVANQPISVAIEAGGRAFQLYKSGIFTG-TCGTALDHGVAAVGYGTE-------NGK 305

Query: 325 PYWIIKNSWGENWGENGYYKICMGRNV 351
            YW+++NSWG  WGE+GY +  M RN+
Sbjct: 306 DYWLVRNSWGSVWGEDGYIR--MERNI 330


>gi|158268253|gb|ABW25046.1| cathepsin L-like protease [Strongylus vulgaris]
          Length = 354

 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 139/364 (38%), Positives = 188/364 (51%), Gaps = 34/364 (9%)

Query: 10  LLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEE 69
           L+LL +SV AS  + +  D  IR        Q  D        +  +K  F K+Y   EE
Sbjct: 7   LVLLCASVFASIDSGSRHDHTIRLHRVKSLRQKIDEAFKL---WDDYKESFGKSYNKDEE 63

Query: 70  HDYRFRVFKANL----RRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPAD 125
           +DY    F  N+       +  +L   T   G+   +DL  S++R+  L   R  R   D
Sbjct: 64  NDY-MEAFVKNVIHIDEHNQEHRLGRKTFEMGLNSIADLPFSQYRK--LNGYRHRRNFGD 120

Query: 126 AQKAP----ILPTN-DLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGE 180
           + ++     + P N ++P   DWRD G VT VK+QG CGSCW+FSATGALEG H  ++G+
Sbjct: 121 SMQSNGTKWLAPFNVEIPDSVDWRDKGLVTDVKNQGMCGSCWAFSATGALEGQHARASGK 180

Query: 181 LVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGG 240
           +VSLSEQ LVDC        +   + GCNGGLM+ AFEYI    G++ E+ YPY G +  
Sbjct: 181 MVSLSEQNLVDC-------STKYGNHGCNGGLMDLAFEYIKDNHGIDTEESYPYVGRE-T 232

Query: 241 SCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSCPYI 297
            C F K  I A    F  +   DE+ +   +   GP+++ I+A     Q Y  GV     
Sbjct: 233 KCHFKKKDIGAEDKGFVDLPEGDEEALKVAVATQGPISIAIDAGHRTFQLYKKGVYYDEE 292

Query: 298 C-GKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVD 355
           C  + LDHGVL+VGYG+   A        YW+IKNSWG  WGE GY +I   R N CGV 
Sbjct: 293 CSSEELDHGVLLVGYGTDPEAG------DYWLIKNSWGPGWGEKGYIRIARNRSNHCGVA 346

Query: 356 SMVS 359
           +  S
Sbjct: 347 TKAS 350


>gi|29165304|gb|AAO65603.1| cathepsin L precursor [Hydra vulgaris]
          Length = 324

 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 121/310 (39%), Positives = 170/310 (54%), Gaps = 25/310 (8%)

Query: 56  FKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLG 115
           +K   +K Y+   E   R+ ++K N RR +   L     +  + +F D+T SEF+     
Sbjct: 30  WKMYHNKVYSHDGEETVRYTIWKDNERRIREHNLKGGDFILKMNQFGDMTNSEFK----A 85

Query: 116 LNRRLRLPADAQKAPILPTNDL-PTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAH 174
            N  L          + P N + P   DWR+ G VT VKDQG CGSCW+FS TG+LEG H
Sbjct: 86  FNGYLSHKHVNGSTFLTPNNFVAPDTVDWRNEGYVTPVKDQGQCGSCWAFSTTGSLEGQH 145

Query: 175 FLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPY 234
           F  TG+LVSLSEQ LVDC        +   ++GC+GGLM++AF YI +  G++ E  YPY
Sbjct: 146 FKKTGKLVSLSEQNLVDC-------STAYGNNGCDGGLMDNAFTYIKENKGIDSEASYPY 198

Query: 235 TGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGG 291
           T  D G C F KS +AA  + F  +   +E+++   +   GP++V I+A     Q Y  G
Sbjct: 199 TAED-GKCVFKKSSVAATDTGFVDIPEGNENKLKEAVASVGPISVAIDASHESFQFYSSG 257

Query: 292 V-SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICM-GR 349
           V + P      LDHGVL+VGYG+          K YW++KNSW  +WG+ GY K+    +
Sbjct: 258 VYNEPSCSSTELDHGVLVVGYGTE-------SGKDYWLVKNSWNTSWGDKGYIKMRRNAK 310

Query: 350 NVCGVDSMVS 359
           N CG+ +  S
Sbjct: 311 NQCGIATKAS 320


>gi|226501480|ref|NP_001150266.1| cysteine protease 1 precursor [Zea mays]
 gi|195637948|gb|ACG38442.1| cysteine protease 1 precursor [Zea mays]
          Length = 462

 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 122/326 (37%), Positives = 176/326 (53%), Gaps = 41/326 (12%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLR--RAKRRQLLDPTAVHGVTKFSDLTPSEFR 110
           + L+ ++  + Y    E D RFRVF  NLR   A   +  +     G+ +F+DLT  EFR
Sbjct: 49  YELWLAEHGRAYNALGERDRRFRVFWDNLRFVDAHNERAAEHGFRLGMNQFADLTNDEFR 108

Query: 111 RQFLGLNRRLRLPADAQKAPILP--------TNDLPTDFDWRDHGAVTGVKDQGACGSCW 162
             +LG     R+PA  ++   +           +LP   DWR+ GAV  VK+QG CGSCW
Sbjct: 109 AAYLGA----RIPAARRRGTAVGERYRHGGGAEELPESVDWREKGAVAPVKNQGQCGSCW 164

Query: 163 SFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK 222
           +FSA  ++E  + + TGE+V+LSEQ+LV+C  +         +SGCNGGLM++AF++I+K
Sbjct: 165 AFSAVSSVESVNQIVTGEMVTLSEQELVECSTD-------GGNSGCNGGLMDAAFDFIIK 217

Query: 223 AGGVEREKDYPYTGTDGGSCKFDKSKI-AAAVSNFSVISSDEDQMAANLVKHGPLAVGIN 281
            GG++ E DYPY   D G C  ++      ++  F  +  ++++     V H P++V I 
Sbjct: 218 NGGIDTEGDYPYKAVD-GKCDINRENAKVVSIDGFEDVPENDEKSLQKAVAHQPVSVAIE 276

Query: 282 A--VWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGE 339
           A     Q Y  GV     C   LDHGV+ VGYG+          K YWI++NSWG  WGE
Sbjct: 277 AGGREFQLYKAGVF-SGTCTTNLDHGVVAVGYGTE-------NGKDYWIVRNSWGAKWGE 328

Query: 340 NGYYKICMGRNV------CGVDSMVS 359
           +GY +  M RNV      CG+  M S
Sbjct: 329 DGYIR--MERNVNATTGKCGIAMMAS 352


>gi|194352752|emb|CAQ00104.1| papain-like cysteine proteinase [Hordeum vulgare subsp. vulgare]
          Length = 351

 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 134/368 (36%), Positives = 196/368 (53%), Gaps = 36/368 (9%)

Query: 5   ILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFK---SKFS 61
           + S L + +L   + + VA N D +++          SE+ L + +    LF+   +K  
Sbjct: 1   MASKLSVAVLLLCVGACVARNSDFSIVGY--------SEEDLSSHDRLVELFEKWLAKHQ 52

Query: 62  KTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLR 121
           K YA+ EE  +RF VFK NL+          +   G+ +F+DLT  EF+  +LGL+    
Sbjct: 53  KAYASFEEKLHRFEVFKDNLKLIDEINREVTSYWLGLNEFADLTHDEFKTTYLGLSPPPA 112

Query: 122 LPADAQ--KAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTG 179
             + ++  +   +  +DLP   DWR  GAVT VK+QG CGSCW+FS   A+EG + + TG
Sbjct: 113 RRSSSRSFRYENVAAHDLPKAVDWRKKGAVTDVKNQGQCGSCWAFSTVAAVEGINAIVTG 172

Query: 180 ELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDG 239
            L +LSEQ+L+DC        S   +SGCNGG+M+ AF YI  +GG+  E+ YPY   +G
Sbjct: 173 NLTALSEQELIDC--------SVDGNSGCNGGMMDYAFSYIASSGGLHTEEAYPYLMEEG 224

Query: 240 GSCKFDKSKI-AAAVSNFSVISSDEDQMAANLVKHGPLAVGINAV--WMQTYIGGV-SCP 295
                 KS+  A ++S +  + + ++Q     + H P++V I A     Q Y GGV   P
Sbjct: 225 SCGDGKKSESEAVSISGYEDVPTKDEQALIKALAHQPVSVAIEASGRHFQFYSGGVFDGP 284

Query: 296 YICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMG----RNV 351
             CG  LDHGV  VGYGS      + K   Y I+KNSWG  WGE GY ++  G      +
Sbjct: 285 --CGAQLDHGVAAVGYGSD-----KGKGHDYIIVKNSWGGKWGEKGYIRMKRGTGKSEGL 337

Query: 352 CGVDSMVS 359
           CG++ M S
Sbjct: 338 CGINKMAS 345


>gi|363807062|ref|NP_001242584.1| uncharacterized protein LOC100804015 precursor [Glycine max]
 gi|255640677|gb|ACU20623.1| unknown [Glycine max]
          Length = 366

 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 117/310 (37%), Positives = 166/310 (53%), Gaps = 32/310 (10%)

Query: 59  KFSKTYATQEEHDYRFRVFKANLRRAKR-RQLLDPTAVHGVTKFSDLTPSEFRRQFLGLN 117
           +  K Y    + D RF+VFK NL   +     L+ T   G+ KF+D+T  E+R  +LG  
Sbjct: 44  RHQKGYNELGKKDKRFQVFKDNLGFIQEHNNNLNNTYKLGLNKFADMTNEEYRAMYLGTK 103

Query: 118 -----RRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEG 172
                R ++  +   +      + LP   DWR  GAV  +KDQG+CGSCW+FS    +E 
Sbjct: 104 SNAKRRLMKTKSTGHRYAFSARDRLPVHVDWRMKGAVAPIKDQGSCGSCWAFSTVATVEA 163

Query: 173 AHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDY 232
            + + TG+ VSLSEQ+LVDCD         + + GCNGGLM+ AFE+I++ GG++ +KDY
Sbjct: 164 INKIVTGKFVSLSEQELVDCDR--------AYNEGCNGGLMDYAFEFIIQNGGIDTDKDY 215

Query: 233 PYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAV--WMQTYIG 290
           PY G DG      K+     +  +  +   ++      V H P++V I A    +Q Y  
Sbjct: 216 PYRGFDGICDPTKKNAKVVNIDGYEDVPPYDENALKKAVAHQPVSVAIEASGRALQLYQS 275

Query: 291 GVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRN 350
           GV     CG  LDHGV++VGYGS            YW+++NSWG  WGE+GY+K  M RN
Sbjct: 276 GVFTG-KCGTSLDHGVVVVGYGSENGV-------DYWLVRNSWGTGWGEDGYFK--MQRN 325

Query: 351 V------CGV 354
           V      CG+
Sbjct: 326 VRTSTGKCGI 335


>gi|42567068|ref|NP_567686.2| putative cysteine proteinase [Arabidopsis thaliana]
 gi|332659371|gb|AEE84771.1| putative cysteine proteinase [Arabidopsis thaliana]
          Length = 356

 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 129/368 (35%), Positives = 197/368 (53%), Gaps = 37/368 (10%)

Query: 3   RLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSK 62
           R +  ++L LL+  VL++  +  D  A       S G    +     E  F ++ SK  K
Sbjct: 5   RPVCMTILFLLIVFVLSAPSSAMDLPAT------SGGHNRSNE--EVEFIFQMWMSKHGK 56

Query: 63  TYATQ-EEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNR-RL 120
           TY     E + RF+ FK NLR   +    + +   G+T+F+DLT  E+R  F G  + + 
Sbjct: 57  TYTNALGEKERRFQNFKDNLRFIDQHNAKNLSYQLGLTRFADLTVQEYRDLFPGSPKPKQ 116

Query: 121 RLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGE 180
           R    +++   L  + LP   DWR  GAV+ +KDQG C SCW+FS   A+EG + + TGE
Sbjct: 117 RNLKTSRRYVPLAGDQLPESVDWRQEGAVSEIKDQGTCNSCWAFSTVAAVEGLNKIVTGE 176

Query: 181 LVSLSEQQLVDCDHECDPEESGSCDSGCNG-GLMNSAFEYILKAGGVEREKDYPYTGTDG 239
           L+SLSEQ+LVDC+           ++GC G GLM++AF++++   G++ EKDYPY GT  
Sbjct: 177 LISLSEQELVDCNL---------VNNGCYGSGLMDTAFQFLINNNGLDSEKDYPYQGTQ- 226

Query: 240 GSC--KFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPY- 296
           GSC  K   S     + ++  + ++++      V H P++VG++    Q ++   SC Y 
Sbjct: 227 GSCNRKQSTSNKVITIDSYEDVPANDEISLQKAVAHQPVSVGVDKK-SQEFMLYRSCIYN 285

Query: 297 -ICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMG----RNV 351
             CG  LDH ++IVGYGS          + YWI++NSWG  WG+ GY KI       + +
Sbjct: 286 GPCGTNLDHALVIVGYGSE-------NGQDYWIVRNSWGTTWGDAGYIKIARNFEDPKGL 338

Query: 352 CGVDSMVS 359
           CG+  + S
Sbjct: 339 CGIAMLAS 346


>gi|426219849|ref|XP_004004130.1| PREDICTED: cathepsin L1 isoform 1 [Ovis aries]
 gi|426219851|ref|XP_004004131.1| PREDICTED: cathepsin L1 isoform 2 [Ovis aries]
          Length = 334

 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 125/320 (39%), Positives = 168/320 (52%), Gaps = 21/320 (6%)

Query: 48  NAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHG----VTKFSD 103
           N + H+  +K+   + Y   EE  +R  V++ N +             HG    +  F D
Sbjct: 24  NLDAHWHQWKATHRRLYGMNEE-GWRRAVWEKNKKIIDLHNQEYSQGKHGFSMAMNAFGD 82

Query: 104 LTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWS 163
           +T  EFR+   G   + R      + P+L   D+P   DW   G VT VK+QG CGSCW+
Sbjct: 83  MTNEEFRQVMNGFQNQKRKKGKLFREPLLI--DVPKSVDWTKKGYVTPVKNQGQCGSCWA 140

Query: 164 FSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA 223
           FSATGALEG  F  TG+LVSLSEQ LVDC     P+     + GCNGGLM++AF+YI + 
Sbjct: 141 FSATGALEGQMFRKTGKLVSLSEQNLVDCSR---PQG----NQGCNGGLMDNAFQYIKEN 193

Query: 224 GGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA- 282
           GG++ E+ YPY  TD  SC +     AA  + F  I   E  +   +   GP++V I+A 
Sbjct: 194 GGLDSEESYPYLATDTSSCNYKPECSAANDTGFVDIPQREKALMKAVATVGPISVAIDAG 253

Query: 283 -VWMQTYIGGVSC-PYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGEN 340
               Q Y  G+   P    K LDHGVL+VGY   GF         +WI+KNSWG  WG N
Sbjct: 254 HASFQFYKSGIYYDPDCSSKDLDHGVLVVGY---GFEGTDSNNNKFWIVKNSWGPEWGWN 310

Query: 341 GYYKICMGRNV-CGVDSMVS 359
           GY K+   +N  CG+ +  S
Sbjct: 311 GYVKMAKDQNNHCGIATAAS 330


>gi|89274062|dbj|BAE80740.1| cysteine proteinase [Platycodon grandiflorus]
          Length = 462

 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 124/357 (34%), Positives = 189/357 (52%), Gaps = 26/357 (7%)

Query: 3   RLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSK 62
           +L+  S+ + LL ++  ++ A++           S      D  + A +   L K    K
Sbjct: 2   KLLSPSMAIALLFALFVASSALDMSIINYDATHASKSSWRTDDEVMAMYESWLVK--HGK 59

Query: 63  TYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH-GVTKFSDLTPSEFRRQFLGLNRRLR 121
           +Y    E + RF++FK NLR        +  +   G+ +F+DLT  E+R  +LG   + +
Sbjct: 60  SYNALGEKEKRFQIFKDNLRFIDEHNAEENLSYKVGLNRFADLTNEEYRSTYLGAKSKPK 119

Query: 122 LPA--DAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTG 179
           L      + AP +  + LP   DWR  GAV  +KDQG+CGSCW+FS   A+EG + + TG
Sbjct: 120 LSKVKSDRYAPRV-GDSLPESVDWRAKGAVAPIKDQGSCGSCWAFSTVNAVEGINQIVTG 178

Query: 180 ELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDG 239
           EL++LSEQ+LVDCD         S + GC+GGLM+  FE+I+  GG++ +KDYPY G D 
Sbjct: 179 ELITLSEQELVDCDK--------SYNEGCDGGLMDYGFEFIINNGGIDTDKDYPYLGRDA 230

Query: 240 GSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGIN--AVWMQTYIGGVSCPYI 297
              ++ K+     + ++  +  + ++     V   P++VGI       Q Y  G+     
Sbjct: 231 RCDQYRKNAKVVTIDSYEDVPVNNEEALKKAVASQPVSVGIEGGGRAFQFYDSGIFTG-K 289

Query: 298 CGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGV 354
           CG  LDHGV +VGYG+        K K YWI++NSWG +WGE GY +  M RN+ G 
Sbjct: 290 CGTALDHGVNVVGYGTE-------KGKDYWIVRNSWGSSWGEAGYIR--MERNLAGT 337


>gi|23344734|gb|AAN28680.1| cathepsin L [Theromyzon tessulatum]
          Length = 351

 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 123/309 (39%), Positives = 165/309 (53%), Gaps = 25/309 (8%)

Query: 46  LLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTA----VHGVTKF 101
           +L+AE  +  FK + +K Y   EE   R  +F  N +  K    L  T       GV +F
Sbjct: 34  VLDAEVAWHKFKLEHNKVYVGIEEESLRKTIFATNYKFIKDHNALHATGEKSFTVGVNEF 93

Query: 102 SDLTPSEFRRQFLGLN-RRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGS 160
           +D+T  EF +   GL     R+      +P +    LP + DWR  G V+ VK+QG+CGS
Sbjct: 94  ADMTVHEFAQMMNGLKPDSTRVSGSTYLSPNIDA-PLPVEVDWRTKGLVSEVKNQGSCGS 152

Query: 161 CWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYI 220
           CW+FS TG+LEG H   TG +V LSEQ LVDC        +   + GCNGGLM +AF+YI
Sbjct: 153 CWAFSTTGSLEGQHMRKTGTMVDLSEQNLVDC-------STSYGNDGCNGGLMTNAFKYI 205

Query: 221 LKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVI-SSDEDQMAANLVKHGPLAVG 279
               G++ E+ YPY G D G CKF K+K+ A V+ F  I + +E ++   L   GP++V 
Sbjct: 206 KDNKGIDTEEAYPYAGRD-GDCKFKKNKVGATVTGFVEIPAGNEKKLQEALATVGPVSVA 264

Query: 280 INA---VWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGEN 336
           I+A    +M    G    P      LDHGVL VGYGS          K Y+I+KNSWG  
Sbjct: 265 IDANHQSFMLYKSGVYDEPECDSAQLDHGVLAVGYGS-------IHGKDYYIVKNSWGTT 317

Query: 337 WGENGYYKI 345
           WGE GY + 
Sbjct: 318 WGEQGYIRF 326


>gi|387015022|gb|AFJ49630.1| Cathepsin L1-like [Crotalus adamanteus]
          Length = 338

 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 130/319 (40%), Positives = 171/319 (53%), Gaps = 22/319 (6%)

Query: 52  HFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH----GVTKFSDLTPS 107
           H+  +KS  SK Y  +EE  +R  +++ NL+  +   L      H    G+  F D+T  
Sbjct: 27  HWLSWKSWHSKKYHEKEE-GWRRMIWEKNLKMIELHNLDHSLGKHSYRLGMNHFGDMTNE 85

Query: 108 EFRRQFLGLNRRLRLPADAQKAPILPTNDL--PTDFDWRDHGAVTGVKDQGACGSCWSFS 165
           EFR+   G  ++ R     + +  L  N L  P   DWR+ G VT VKDQG CGSCW+FS
Sbjct: 86  EFRQVMNGF-KQSRSQRKYKGSQFLEPNFLQAPKSVDWREKGYVTPVKDQGQCGSCWAFS 144

Query: 166 ATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGG 225
           ATGALEG HF  TG+LVSLSEQ L+DC     PE     + GCNGGLM+ AF+YI    G
Sbjct: 145 ATGALEGQHFRKTGKLVSLSEQNLIDC---SGPE----GNQGCNGGLMDQAFQYIKDNNG 197

Query: 226 VEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKH-GPLAVGINA-- 282
           ++ E+ YPY G D   C +     +A  + F  I    ++     V   GP++V I+A  
Sbjct: 198 IDSEESYPYIGKDDEDCLYKPEYNSANDTGFVDIPEGRERALMKAVAAVGPISVAIDASH 257

Query: 283 VWMQTYIGGVSCPYICG-KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENG 341
              Q Y  GV     C  + LDHGVL+VGYG  G       +K YWI+KNSW E WG+ G
Sbjct: 258 TSFQFYESGVYYEPQCNSEELDHGVLVVGYGYEGTDDDN--KKRYWIVKNSWSEKWGDQG 315

Query: 342 YYKICMGR-NVCGVDSMVS 359
           Y  +   R N CG+ S  S
Sbjct: 316 YIHMAKDRSNNCGIASAAS 334


>gi|224069140|ref|XP_002326284.1| predicted protein [Populus trichocarpa]
 gi|118482340|gb|ABK93094.1| unknown [Populus trichocarpa]
 gi|222833477|gb|EEE71954.1| predicted protein [Populus trichocarpa]
          Length = 358

 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 135/368 (36%), Positives = 195/368 (52%), Gaps = 34/368 (9%)

Query: 4   LILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHH---FSLFKSKF 60
           L++SS+L LL      S+   ++   ++   +  D E S   +L        F+ F  + 
Sbjct: 7   LVVSSILFLLCCVAAGSSFDESNPIKLVSDRL-HDFESSFVKVLGQSRRALSFARFAHRH 65

Query: 61  SKTYATQEEHDYRFRVFKANLR--RAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNR 118
            K Y T+ E   RF +F  +L   R+  ++ L  T   G+ +F+D T  EF++  LG  +
Sbjct: 66  GKRYETEGEMKLRFAIFSESLDLIRSTNKKGLPYTL--GLNQFADWTWQEFQKYRLGAAQ 123

Query: 119 RLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLST 178
                A  +    L    LP   DWR+ G V+ VK+QG CGSCW+FS TGALE A+  + 
Sbjct: 124 NC--SATTRGNHKLTNALLPETKDWREEGIVSPVKNQGHCGSCWTFSTTGALEAAYHQAF 181

Query: 179 GELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTD 238
           G+ +SLSEQQLVDC    +       + GCNGGL + AFEYI   GG++ E+ YPYTG D
Sbjct: 182 GKGISLSEQQLVDCARAFN-------NFGCNGGLPSQAFEYIKFNGGLDTEEAYPYTGKD 234

Query: 239 GGSCKFDKSKIAAAV---SNFSVISSDEDQMAANLVKHGPLAVGINAVW-MQTYIGGVSC 294
             +CKF    +   V    N ++ + DE + A   V+  P++V    V   + Y  GV  
Sbjct: 235 -DACKFSSENVGVRVVESVNITLGAEDELKHAVAFVR--PVSVAFEVVGSFRLYKEGVYT 291

Query: 295 PYICGKY---LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNV 351
              CG     ++H VL VGYG            PYW+IKNSWGE+WG+NGY+K+ MG+N+
Sbjct: 292 TSTCGSTPMDVNHAVLAVGYGVE-------NGIPYWLIKNSWGEDWGDNGYFKMEMGKNM 344

Query: 352 CGVDSMVS 359
           CG+ +  S
Sbjct: 345 CGIATCAS 352


>gi|139947602|ref|NP_001077155.1| cathepsin L1 precursor [Bos taurus]
 gi|134025180|gb|AAI34742.1| CTSL1 protein [Bos taurus]
 gi|296484500|tpg|DAA26615.1| TPA: cathepsin L1 [Bos taurus]
          Length = 333

 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 123/324 (37%), Positives = 175/324 (54%), Gaps = 24/324 (7%)

Query: 44  DHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH----GVT 99
           DH L+ +  + L+K+   K Y   EE  +R  V+K N++  +          H     + 
Sbjct: 22  DHSLDTQ--WKLWKAAHRKPYDLNEE-GWRKAVWKKNMKMIELHNQEYSQGKHSFSMAMN 78

Query: 100 KFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACG 159
            F D+T  EFR    G  R+           I  +  +P   DWR+ G VT VK+QG CG
Sbjct: 79  AFGDMTNEEFRHTMNGFQRQKNKKGKEFHETIFAS--IPPSVDWREKGYVTPVKNQGKCG 136

Query: 160 SCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEY 219
           SCW+FSATGALEG  F  TG+LVSLSEQ LVDC     PE     + GC+GG +++AF+Y
Sbjct: 137 SCWAFSATGALEGQMFQKTGKLVSLSEQNLVDCSQ---PE----GNRGCHGGFIDNAFQY 189

Query: 220 ILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVG 279
           +L  GG++ E+ YPYTG   G+C ++ +  AA  + F  +   E  +   +   GP++V 
Sbjct: 190 VLDVGGLDSEESYPYTGLV-GTCLYNPNNSAANETGFVDLPKQEKALMKAVANLGPISVA 248

Query: 280 INA--VWMQTYIGGVSC-PYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGEN 336
           ++A     Q Y  G+   P    + +DH VL+VGY   GF      +  YW++KNSWGE+
Sbjct: 249 VDAHNPSFQFYKSGIYYEPNCSSESVDHAVLVVGY---GFEGADSDDNKYWLVKNSWGEH 305

Query: 337 WGENGYYKICMGRNV-CGVDSMVS 359
           WG NGY K+   RN  CG+ +M S
Sbjct: 306 WGMNGYIKMAKDRNNHCGIATMAS 329


>gi|94421564|gb|ABF18889.1| cathepsin-L [Lygus lineolaris]
          Length = 314

 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 121/299 (40%), Positives = 164/299 (54%), Gaps = 27/299 (9%)

Query: 56  FKSKFSKTYATQEEHDYRFRVF-----KANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFR 110
           +K+K+ KTY + E    R  ++     K     A+  Q L    + G+  F+D+   EFR
Sbjct: 30  YKAKYGKTYESNENEAARRTIYFMAKEKVMEHNARFEQGLVSYKL-GLNSFADMHNGEFR 88

Query: 111 RQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGAL 170
           +   G  R    P ++    +     LP   DWR  GAVT +K+QG CGSCW+FS TG+L
Sbjct: 89  KMMNGYRRGT--PRNSVVVHVESNITLPASVDWRTKGAVTPIKNQGQCGSCWAFSTTGSL 146

Query: 171 EGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREK 230
           EG H L  G+LVSLSEQ+LVDC        +   + GC+GGLM+ AF YI K  G++ E+
Sbjct: 147 EGQHALKKGKLVSLSEQELVDC-------SAAEGNDGCDGGLMDDAFTYIKKNNGIDTEQ 199

Query: 231 DYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVGINA-VW-MQT 287
            YPYTG D G+C F KS +AA V+ F  V S  E  +       GP++V I+A  W  Q 
Sbjct: 200 SYPYTGED-GTCSFKKSDVAATVTGFVDVTSGSESGLQDASATIGPISVAIDASSWDFQL 258

Query: 288 YIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKI 345
           Y  GV     C    LDHGVL+VGYG+            YW++KNSWG +WG +GY ++
Sbjct: 259 YESGVYDVSDCSTTELDHGVLVVGYGTD-------DGTAYWLVKNSWGTDWGHHGYIQM 310


>gi|164420679|ref|NP_001037464.2| fibroinase precursor [Bombyx mori]
 gi|40556818|gb|AAR87763.1| fibroinase precursor [Bombyx mori]
          Length = 341

 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 127/325 (39%), Positives = 176/325 (54%), Gaps = 32/325 (9%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRR-AKRRQLLDPTAVH---GVTKFSDLTPSE 108
           +S FK +    Y ++ E ++R +++  +    AK  Q  +   V    G+ K+ D+   E
Sbjct: 27  WSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYGDMLHHE 86

Query: 109 FRRQFLGLNR------RLRLPADAQKAP--ILPTN-DLPTDFDWRDHGAVTGVKDQGACG 159
           F +   G N+       L +   + +    I P N  LP   DWR HGAVT +KDQG CG
Sbjct: 87  FVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDWRKHGAVTDIKDQGKCG 146

Query: 160 SCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEY 219
           SCWSFS TGALEG HF  +G LVSLSEQ L+DC      E+ G  ++GCNGGLM++AF+Y
Sbjct: 147 SCWSFSTTGALEGQHFRQSGYLVSLSEQNLIDC-----SEQYG--NNGCNGGLMDNAFKY 199

Query: 220 ILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVI-SSDEDQMAANLVKHGPLAV 278
           I   GG++ E+ YPY G D   C+++     A    F  I   DE ++   +   GP++V
Sbjct: 200 IKDNGGIDTEQTYPYEGVD-DKCRYNPKNTGAEDVGFVDIPEGDEQKLMEAVATVGPVSV 258

Query: 279 GINA--VWMQTYIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGE 335
            I+A     Q Y  GV     C    LDHGVL+VGYG+        +   YW++KNSWG 
Sbjct: 259 AIDASHTSFQLYSSGVYNEEECSSTDLDHGVLVVGYGTDE------QGVDYWLVKNSWGR 312

Query: 336 NWGENGYYKICMGR-NVCGVDSMVS 359
           +WGE GY K+   + N CG+ S  S
Sbjct: 313 SWGELGYIKMIRNKNNRCGIASSAS 337


>gi|226821421|gb|ACO82386.1| cathepsin L-like protein [Lutjanus argentimaculatus]
          Length = 301

 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 129/310 (41%), Positives = 168/310 (54%), Gaps = 24/310 (7%)

Query: 61  SKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH----GVTKFSDLTPSEFRRQFLGL 116
           SK Y  +EE  +R  V++ NL++ +   L      H    G+  F D+T  EFR+   G 
Sbjct: 1   SKKYHEKEE-GWRRMVWEKNLKKIEMHNLEHSMGTHSYRLGMNHFGDMTHEEFRQIMNGY 59

Query: 117 NRRLRLPADAQKAPILPTNDL--PTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAH 174
            R+ +       +  +  N L  P   DWRD+G VT VKDQG CGSCW+FS TGALEG H
Sbjct: 60  KRKPQRKFTG--SLFMEPNFLEAPRAVDWRDNGYVTPVKDQGQCGSCWAFSTTGALEGQH 117

Query: 175 FLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPY 234
           F  TG+LVSLSEQ LVDC     PE     + GCNGGLM+ AF+YI    G++ E  YPY
Sbjct: 118 FRKTGKLVSLSEQNLVDCSR---PE----GNEGCNGGLMDQAFQYIKDNQGLDSEDSYPY 170

Query: 235 TGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKH-GPLAVGINA--VWMQTYIGG 291
            GTD   C +D    +A  + F  I S +++     V   GP++V I+A     Q Y  G
Sbjct: 171 LGTDDQPCHYDPKYNSANDTGFVDIPSGKERALMKAVAAVGPVSVAIDAGHESFQFYQSG 230

Query: 292 VSCPYIC-GKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR- 349
           +     C  + LDHGVL+VGY   GF       K YWI+KNSW E WG+ GY  +   R 
Sbjct: 231 IYYEKDCSSEELDHGVLVVGY---GFEGEDVDGKKYWIVKNSWSEKWGDKGYIYMAKDRK 287

Query: 350 NVCGVDSMVS 359
           N CG+ +  S
Sbjct: 288 NHCGIATAAS 297


>gi|226443040|ref|NP_001140018.1| Cathepsin L1 precursor [Salmo salar]
 gi|221221188|gb|ACM09255.1| Cathepsin L1 precursor [Salmo salar]
          Length = 338

 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 128/321 (39%), Positives = 171/321 (53%), Gaps = 24/321 (7%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH----GVTKFSDLT 105
           E H+ L+K+  SK+Y   EE  +R  V++ NL++ +   L      H    G+  F D+T
Sbjct: 27  EDHWHLWKNWHSKSYHESEE-GWRRMVWEKNLKKIEMHNLEHTMGKHSYRLGMNHFGDMT 85

Query: 106 PSEFRRQFLGLNRRLRLPADAQKAPILPTNDL--PTDFDWRDHGAVTGVKDQGACGSCWS 163
             EFR+   G  +        + +  +  N L  P   DWR+ G VT VKDQG+CGSCW+
Sbjct: 86  NEEFRQTMNGYKQTTE--RKFKGSLFMEPNYLQAPKAVDWREKGYVTPVKDQGSCGSCWA 143

Query: 164 FSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA 223
           FS TGA+EG  F  TG+LVSLSEQ LVDC     PE     + GCNGGLM+ AF+YI   
Sbjct: 144 FSTTGAMEGQQFRKTGKLVSLSEQNLVDCSR---PE----GNEGCNGGLMDQAFQYIQDN 196

Query: 224 GGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVGINA 282
            G++ E+ YPY GTD   C +      A  + F  + S  E  M   +   GP++V I+A
Sbjct: 197 AGLDTEESYPYVGTDEDPCHYKPEFSGANETGFVDIPSGKEHAMMKAVAAVGPVSVAIDA 256

Query: 283 --VWMQTYIGGVSCPYIC-GKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGE 339
                Q Y  G+     C  + LDHGVL+VGY   GF       K YWI+KNSW E WG+
Sbjct: 257 GHESFQFYESGIYYEKECSSEELDHGVLVVGY---GFEGEDVDGKKYWIVKNSWSEKWGD 313

Query: 340 NGYYKICMGR-NVCGVDSMVS 359
            GY  +   R N CG+ +  S
Sbjct: 314 KGYIYMAKDRKNHCGIATASS 334


>gi|226505708|ref|NP_001141813.1| uncharacterized protein LOC100273952 precursor [Zea mays]
 gi|194706024|gb|ACF87096.1| unknown [Zea mays]
 gi|413945958|gb|AFW78607.1| hypothetical protein ZEAMMB73_489507 [Zea mays]
          Length = 460

 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 132/342 (38%), Positives = 175/342 (51%), Gaps = 57/342 (16%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKAN--------------LRRAKRRQLLDPTAV 95
           E  F  + ++  K YAT EE   R  VF  N                         P+  
Sbjct: 33  EAQFDAWCAEHGKAYATPEERAARLAVFADNAAFVAAHNARAGANAAGGGGGGAAPPSYT 92

Query: 96  HGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPT-------NDLPTDFDWRDHGA 148
             +  F+DLT  EFR   LG   R+  P  A ++   P          +P   DWR  GA
Sbjct: 93  LALNAFADLTHEEFRAARLG---RI-APGAALRSRAAPVYWGLGGGAAVPDALDWRKSGA 148

Query: 149 VTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGC 208
           VT VKDQG+CG+CWSFSATGA+EG + + TG LVSLSEQ+L+DCD         S +SGC
Sbjct: 149 VTKVKDQGSCGACWSFSATGAMEGINKIKTGSLVSLSEQELIDCDR--------SYNSGC 200

Query: 209 NGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAA 268
            GGLM+ A+++++K GG++ E+DYPY   DG   K    K    +  ++ + S+++ +  
Sbjct: 201 GGGLMDYAYKFVIKNGGIDTEEDYPYREADGTCNKNKLKKRVVTIDGYTDVPSNKEDLLL 260

Query: 269 NLVKHGPLAVGI--NAVWMQTYIGGV---SCPYICGKYLDHGVLIVGYGSSGFAPIRFKE 323
             V   P++VGI  +A   Q Y  G+    CP      LDH VLIVGYGS G        
Sbjct: 261 QAVAQQPVSVGICGSARAFQLYYQGIFDGPCP----TSLDHAVLIVGYGSEG-------G 309

Query: 324 KPYWIIKNSWGENWGENGYYKICMGRN------VCGVDSMVS 359
           K YWI+KNSWGE+WG  GY    M RN      VCG++ M S
Sbjct: 310 KDYWIVKNSWGESWGMKGYMH--MHRNTGDSKGVCGINMMAS 349


>gi|358255476|dbj|GAA57175.1| cathepsin L [Clonorchis sinensis]
          Length = 385

 Score =  202 bits (513), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 130/356 (36%), Positives = 182/356 (51%), Gaps = 46/356 (12%)

Query: 34  VVPSDGEQSEDHLLNAEHHFSL------FKSKFSKTYATQEEHDYRFRVFKANLRRAKRR 87
           + P D    +D ++  + +F+L      F + + + Y    EH+ RF++F  N  R  + 
Sbjct: 42  LTPLDSMHMQD-VIGVDWNFTLSSIWKHFMTTYKRNYIDPSEHERRFKIFANNFVRISKH 100

Query: 88  QLL----DPTAVHGVTKFSD-----------LTPSEFRRQFLGLNRRLRLPADAQKAPIL 132
            +       +   G+ +FSD               E  ++       L    D  K  I 
Sbjct: 101 NVRFIQGQVSYTMGINEFSDKVIGLIIHTICFQTDEELKRLRCFRGSLNASRDGSKY-IT 159

Query: 133 PTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDC 192
                P++ DWR+ GAVT VK+QG CGSCW+FSATGA+EG +FL+TG LVSLSEQQLVDC
Sbjct: 160 IAAPPPSEIDWRNKGAVTPVKNQGNCGSCWAFSATGAIEGQNFLATGNLVSLSEQQLVDC 219

Query: 193 DHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPY----TGTDGGSCKFDKSK 248
             E         ++ CNGGLM++AF+Y+  + G++ E  YPY    TG    +C+F+  +
Sbjct: 220 SSEYG-------NNACNGGLMDNAFKYVKDSNGIDTEASYPYVSGETGDANPTCRFNLKE 272

Query: 249 IAAAVSNFSVISSDEDQMAANLVKH-GPLAVGINAVW--MQTYIGGVSCPYICGK-YLDH 304
               V+ +  +   +       V H GP++V INA      +Y  GV     C    LDH
Sbjct: 273 AVVRVTGYIDLPRGQVSELKQAVGHYGPISVAINAGLPSFMSYKSGVYSDDQCSSDDLDH 332

Query: 305 GVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVS 359
           GVL+VGYG            PYW+IKNSWG +WGENGY KI     N+CGV SM S
Sbjct: 333 GVLLVGYGEE-------NGIPYWLIKNSWGPHWGENGYVKILRDHNNLCGVASMAS 381


>gi|348546019|ref|XP_003460476.1| PREDICTED: cathepsin L-like [Oreochromis niloticus]
 gi|348546143|ref|XP_003460538.1| PREDICTED: cathepsin L-like [Oreochromis niloticus]
          Length = 334

 Score =  202 bits (513), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 125/321 (38%), Positives = 172/321 (53%), Gaps = 28/321 (8%)

Query: 52  HFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH----GVTKFSDLTPS 107
            F  +K KF ++Y +  E  +R +++  N +      +L    +     G+T F+D+   
Sbjct: 25  EFHAWKLKFERSYHSPSEEAHRRQIWLNNRKFVLVHNILADQGLKSYRLGMTYFADMENE 84

Query: 108 EFRR---QFLGLNRRLRLPADAQKAPILPT-NDLPTDFDWRDHGAVTGVKDQGACGSCWS 163
           E++R   Q    +    LP        LP   DLP   DWRD G VT VKDQ  CGSCW+
Sbjct: 85  EYKRVISQGCLHSFNASLPRRGSTFFRLPEGTDLPDAVDWRDKGYVTDVKDQKQCGSCWA 144

Query: 164 FSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA 223
           FSATG+LEG HF  TG LVSLSEQQLVDC  +         + GC GGLM+ AF+YI   
Sbjct: 145 FSATGSLEGQHFRKTGTLVSLSEQQLVDCSGDYG-------NMGCMGGLMDYAFQYIQAN 197

Query: 224 GGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISS-DEDQMAANLVKHGPLAVGINA 282
           GG++ E+ YPY   + G C+++   I A  + ++ +S  DED +   +   GP++VGI+A
Sbjct: 198 GGIDTEESYPYE-AENGKCRYNPDNIGATSTGYTEVSQGDEDALKEAVATIGPISVGIDA 256

Query: 283 VWM--QTYIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGE 339
             M  Q Y  GV     C    LDHGVL VGYG+            YW++KNSWG  WG+
Sbjct: 257 SQMSFQFYESGVYNEPDCSSLELDHGVLAVGYGTE-------DGNDYWLVKNSWGLEWGD 309

Query: 340 NGYYKICMGR-NVCGVDSMVS 359
            GY K+   + N CG+ +  S
Sbjct: 310 KGYIKMSRNKSNQCGIATAAS 330


>gi|255568299|ref|XP_002525124.1| cysteine protease, putative [Ricinus communis]
 gi|223535583|gb|EEF37251.1| cysteine protease, putative [Ricinus communis]
          Length = 342

 Score =  202 bits (513), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 133/365 (36%), Positives = 182/365 (49%), Gaps = 43/365 (11%)

Query: 1   MERLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKF 60
           M  L     LL+ L  VLA       D A  R++  S   +  +  +          +K 
Sbjct: 1   MALLCKGQFLLIALFFVLAMWA----DQASTRELHESTMVERHEKWM----------AKH 46

Query: 61  SKTYATQEEHDYRFRVFKANLRRAKRRQLL-DPTAVHGVTKFSDLTPSEFRRQFLGLNRR 119
            K Y   EE   RF++FK N+   +      + + + G+ +F+DLT  EFR  + G  R 
Sbjct: 47  GKVYKDDEEKLRRFQIFKNNVEFIESSNAAGNNSYMLGINRFADLTNEEFRASWNGYKR- 105

Query: 120 LRLPADAQK--APILPTN--DLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHF 175
              P DA +   P    N   LP   DWR  GAVT +KDQ  CGSCW+FSA  A EG H 
Sbjct: 106 ---PLDASRIVTPFKYENVTALPYSMDWRRKGAVTSIKDQRECGSCWAFSAVAATEGVHK 162

Query: 176 LSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYT 235
           L TG+LVSLSEQ+LVDCD + +       D GC GGLM  AF++I + GG+  E +Y Y 
Sbjct: 163 LRTGKLVSLSEQELVDCDVKGE-------DKGCQGGLMEDAFKFIKRNGGITTEANYAYR 215

Query: 236 GTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWM--QTYIGGVS 293
           G DG      ++   A ++ + V+  + +      V H P++V I+A  M  Q Y  G+ 
Sbjct: 216 GRDGKCDTKKEASHVAKITGYQVVPENSEAALLKAVAHQPVSVSIDAGSMSFQFYQSGIY 275

Query: 294 CPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYK----ICMGR 349
               CG  L+HGV  VGYG+S           YWI+KNSWG  WGE GY +    I   +
Sbjct: 276 AGS-CGSDLNHGVAAVGYGTSSSGS------KYWIVKNSWGPEWGERGYVRMKRDITSRK 328

Query: 350 NVCGV 354
            +CG+
Sbjct: 329 GLCGI 333


>gi|261289811|ref|XP_002611767.1| hypothetical protein BRAFLDRAFT_284308 [Branchiostoma floridae]
 gi|229297139|gb|EEN67777.1| hypothetical protein BRAFLDRAFT_284308 [Branchiostoma floridae]
          Length = 336

 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 132/366 (36%), Positives = 184/366 (50%), Gaps = 49/366 (13%)

Query: 9   LLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQE 68
           ++LL+L +V+  A A          V+P + E            + ++K +  K Y T+ 
Sbjct: 1   MMLLILGAVITMATA---------GVLPHNKE------------WEMWKLQHGKQYETEA 39

Query: 69  EHDYRFRVFKANLRRAKRRQLLDPTAVHGVT----KFSDLTPSEFRRQFLGLNRRLRLPA 124
           E   R   F+ N  +     +     +H  T    KF D+   EF ++ +G   ++    
Sbjct: 40  EEYSRRFTFEKNTIKIAEHNIRASLGMHSYTLAMNKFGDMHHEEFHQRIMGGCLKIVKVN 99

Query: 125 DAQKAPILPTND----LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGE 180
                  +  ND    LP   DWR+   V+ VKDQG CGSCW+FS TG+LEG H   TG+
Sbjct: 100 KPLLGSEVGDNDDNGTLPKSVDWRNSAMVSEVKDQGECGSCWAFSTTGSLEGQHANKTGK 159

Query: 181 LVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGG 240
           LV LSEQQLVDC  +         + GC GGLM+ AF+YI   GG++ E+ YPYT TD  
Sbjct: 160 LVDLSEQQLVDCSKDFG-------NQGCGGGLMDQAFQYIKANGGLDTEESYPYTATDDK 212

Query: 241 SCKFDKSKIAAAVSNFS-VISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGV-SCPY 296
            CKFD S + A +  +  V S +E  +   +   GP++V I+A     Q Y  GV   P 
Sbjct: 213 PCKFDNSSVGATLIGYKDVKSGNEHALKRAVATVGPISVAIDAGHESFQFYSSGVYDEPQ 272

Query: 297 ICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR---NVCG 353
              + LDHGVL+VGYG    A      + +WI+KNSWG NWG+ GY  I M R   N CG
Sbjct: 273 CSSEQLDHGVLVVGYG----AMNDNSHQAFWIVKNSWGPNWGDQGY--IMMSRNKDNQCG 326

Query: 354 VDSMVS 359
           + +  S
Sbjct: 327 IATSAS 332


>gi|164472556|gb|ABY58967.1| cathepsin L [Toxoplasma gondii]
          Length = 421

 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 126/318 (39%), Positives = 171/318 (53%), Gaps = 27/318 (8%)

Query: 40  EQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVT 99
           E  E H  +A   FS F++ ++K+YAT+EE   R+ +FK NL           +    + 
Sbjct: 106 EWKEAHFQDA---FSSFQAMYAKSYATEEEKQRRYAIFKNNLVYIHTHNQQGYSYSLKMN 162

Query: 100 KFSDLTPSEFRRQFLGLNRRLRLPAD-----AQKAPILPTNDLPTDFDWRDHGAVTGVKD 154
            F DL+  EFRR++LG  +   L +       +   +LP+ +LP   DWR  G VT VKD
Sbjct: 163 HFGDLSRDEFRRKYLGFKKSRNLKSHHLGVATELLNVLPS-ELPAGVDWRSRGCVTPVKD 221

Query: 155 QGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMN 214
           Q  CGSCW+FS TGALEGAH   TG+LVSLSEQ+L+DC            +  C+GG MN
Sbjct: 222 QRDCGSCWAFSTTGALEGAHCAKTGKLVSLSEQELMDCSR-------AEGNQSCSGGEMN 274

Query: 215 SAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFS-VISSDEDQMAANLVKH 273
            AF+Y+L +GG+  E  YPY   D   C+    +    +  F  V    E  M A L K 
Sbjct: 275 DAFQYVLDSGGICSEDAYPYLARD-EECRAQSCEKVVKILGFKDVPRRSEAAMKAALAK- 332

Query: 274 GPLAVGINAVWM--QTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKN 331
            P+++ I A  M  Q Y  GV     CG  LDHGVL+VGYG+      +  +K +WI+KN
Sbjct: 333 SPVSIAIEADQMPFQFYHEGV-FDASCGTDLDHGVLLVGYGTD-----KESKKDFWIMKN 386

Query: 332 SWGENWGENGYYKICMGR 349
           SWG  WG +GY  + M +
Sbjct: 387 SWGTGWGRDGYMYMAMHK 404


>gi|111073715|dbj|BAF02546.1| triticain alpha [Triticum aestivum]
 gi|388890585|gb|AFK80346.1| cysteine endopeptidase EP alpha [Secale cereale x Triticum durum]
          Length = 461

 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 119/327 (36%), Positives = 174/327 (53%), Gaps = 34/327 (10%)

Query: 35  VPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTA 94
           + S GE+SE+ +      ++ + S+  +TY    E + RF VF+ NLR   +        
Sbjct: 26  IVSYGERSEEEV---RRMYAEWMSEHRRTYNAIGEEERRFEVFRDNLRYIDQHNAAADAG 82

Query: 95  VH----GVTKFSDLTPSEFRRQFLGL----NRRLRLPADAQKAPILPTNDLPTDFDWRDH 146
           +H    G+ +F+DLT  E+R  +LG     +R  +L A  Q        +LP   DWR  
Sbjct: 83  LHSFRLGLNRFADLTNEEYRSTYLGARTKPDRERKLSARYQADD---NEELPETVDWRKK 139

Query: 147 GAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDS 206
           GAV  +KDQG CGSCW+FSA  A+EG + + TG+++ LSEQ+LVDCD         S + 
Sbjct: 140 GAVAAIKDQGGCGSCWAFSAIAAVEGINQIVTGDMIPLSEQELVDCDT--------SYNE 191

Query: 207 GCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQM 266
           GCNGGLM+ AFE+I+  GG++ E+DYPY   D       K+     +  +  +  + ++ 
Sbjct: 192 GCNGGLMDYAFEFIINNGGIDSEEDYPYKERDNRCDANKKNAKVVTIDGYEDVPVNSEKS 251

Query: 267 AANLVKHGPLAVGINA--VWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEK 324
               V + P++V I A     Q Y  G+     CG  LDHGV  VGYG+          K
Sbjct: 252 LQKAVANQPISVAIEAGGRAFQLYKSGIFTG-TCGTALDHGVAAVGYGTE-------NGK 303

Query: 325 PYWIIKNSWGENWGENGYYKICMGRNV 351
            YW+++NSWG  WGE+GY +  M RN+
Sbjct: 304 DYWLVRNSWGTVWGEDGYIR--MERNI 328


>gi|388491952|gb|AFK34042.1| unknown [Lotus japonicus]
          Length = 352

 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 131/343 (38%), Positives = 179/343 (52%), Gaps = 29/343 (8%)

Query: 26  DDDAMIRQVVPSDGEQSEDHLLNAEHH---FSLFKSKFSKTYATQEEHDYRFRVFKANLR 82
           +D   IR V  SD E+    ++    H   F+ F SK+ K Y + EE  +RFR+F  NL 
Sbjct: 25  EDSNPIRLV--SDLEEQVLQVIGQTRHAASFARFASKYGKRYDSVEEIQHRFRIFSENLE 82

Query: 83  RAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFD 142
             K       +   G+  F+DL+  EFR Q LG  +             L    L  + D
Sbjct: 83  LIKSTNKKRLSYKLGLNHFADLSWDEFRTQKLGAAQNCSATLIGNHK--LTDAVLSAEKD 140

Query: 143 WRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESG 202
           WR    V+ VKDQ  CGSCW+FS TGALE A+  + G+ +SLSEQQLVDC        +G
Sbjct: 141 WRKESIVSEVKDQAHCGSCWTFSTTGALEAAYAQAHGKNISLSEQQLVDC--------AG 192

Query: 203 SCDS-GCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAV-SNFSVIS 260
           + ++ GCNGGL + AFEYI   GG+  EK+YPYT  D  S KF    +A  V  + ++  
Sbjct: 193 AFNNFGCNGGLPSQAFEYIKYNGGIALEKEYPYTAKDEAS-KFTAENVAVRVLDSVNITL 251

Query: 261 SDEDQMAANLVKHGPLAVGINAV-WMQTYIGGVSCPYICGKY---LDHGVLIVGYGSSGF 316
             ED++   +    P++V    V   + Y  GV     CG     ++H VL VGYG    
Sbjct: 252 GAEDELKHAVAFARPVSVAFQVVDGFRLYKEGVYTSDTCGNTPMDVNHAVLAVGYGVE-- 309

Query: 317 APIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVS 359
                   PYWIIKNSWG  WG++GY+K+ +G+N+CGV +  S
Sbjct: 310 -----NNVPYWIIKNSWGSTWGDHGYFKMELGKNMCGVATCAS 347


>gi|158268255|gb|ABW25047.1| cathepsin L-like protease [Strongylus vulgaris]
          Length = 354

 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 139/364 (38%), Positives = 188/364 (51%), Gaps = 34/364 (9%)

Query: 10  LLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEE 69
           L+LL +SV AS  + +  D  IR        Q  D        +  +K  F K+Y   EE
Sbjct: 7   LVLLCASVFASIDSGSRRDHTIRLHRVKSLRQKIDEAFKL---WDDYKEAFGKSYNKDEE 63

Query: 70  HDYRFRVFKANL----RRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPAD 125
           +DY    F  N+       +  +L   T   G+   +DL  S++R+  L   R  R   D
Sbjct: 64  NDY-MEAFVKNVIHIDEHNQEHRLGRKTFEMGLNSIADLPFSQYRK--LNGYRHRRNFGD 120

Query: 126 AQKAP----ILPTN-DLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGE 180
           + ++     + P N ++P   DWRD G VT VK+QG CGSCW+FSATGALEG H  ++G+
Sbjct: 121 SMQSNGTKWLAPFNVEIPDSVDWRDKGLVTDVKNQGMCGSCWAFSATGALEGQHARASGK 180

Query: 181 LVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGG 240
           +VSLSEQ LVDC        +   + GCNGGLM+ AFEYI    G++ E+ YPY G +  
Sbjct: 181 MVSLSEQNLVDC-------STKYGNHGCNGGLMDLAFEYIKDNHGIDTEESYPYVGRE-T 232

Query: 241 SCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSCPYI 297
            C F K  I A    F  +   DE+ +   +   GP+++ I+A     Q Y  GV     
Sbjct: 233 KCHFKKKDIGAEDKGFVDLPEGDEEALKVAVATQGPISIAIDAGHRTFQLYKKGVYYDEE 292

Query: 298 C-GKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVD 355
           C  + LDHGVL+VGYG+   A        YW+IKNSWG  WGE GY +I   R N CGV 
Sbjct: 293 CSSEELDHGVLLVGYGTDPEAG------DYWLIKNSWGPGWGEKGYIRIARNRSNHCGVA 346

Query: 356 SMVS 359
           +  S
Sbjct: 347 TKAS 350


>gi|144905104|dbj|BAF56427.1| cysteine proteinase [Lotus japonicus]
          Length = 342

 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 121/312 (38%), Positives = 168/312 (53%), Gaps = 37/312 (11%)

Query: 58  SKFSKTYATQEEHDYRFRVFKANLR--RAKRRQLLDPTAVHGVTKFSDLTPSEF---RRQ 112
           +++ K Y   +E + RF +F+ N++   A       P  + GV +F+DLT  EF   R +
Sbjct: 44  ARYGKVYKDLQEKEKRFNIFQENVKYIEASNNAGNKPYKL-GVNQFTDLTNKEFIATRNK 102

Query: 113 FLGLNRRLRLPADAQKAPILPTNDL--PTDFDWRDHGAVTGVKDQGACGSCWSFSATGAL 170
           F G      + +   +       ++  P+  DWR  GAVT VK+QG CG CW+FSA  A 
Sbjct: 103 FKG-----HMSSSITRTTTFKYENVTAPSTVDWRQEGAVTPVKNQGTCGCCWAFSAVAAT 157

Query: 171 EGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREK 230
           EG H LSTG LVSLSEQ+LVDCD       +   D GC GGLM+ AF++I++ GG+  E 
Sbjct: 158 EGIHKLSTGNLVSLSEQELVDCD-------TSGADQGCQGGLMDDAFKFIIQNGGLNTEA 210

Query: 231 DYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTY 288
            YPY G DG     ++    A ++ +  + S+ +Q     V + P++V I+A     Q Y
Sbjct: 211 QYPYQGVDGTCNTNEEVTHVATITGYEDVPSNNEQALQQAVANQPISVAIDASGSDFQNY 270

Query: 289 IGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMG 348
             GV     CG  LDHGV +VGYG S           YW++KNSWGE+WGE GY  I M 
Sbjct: 271 QSGVFTGS-CGTQLDHGVAVVGYGVSD------DGTKYWLVKNSWGEDWGEEGY--IRMQ 321

Query: 349 RNV------CGV 354
           R+V      CG+
Sbjct: 322 RDVEAPEGLCGI 333


>gi|354507493|ref|XP_003515790.1| PREDICTED: cathepsin L1-like [Cricetulus griseus]
 gi|344259154|gb|EGW15258.1| Cathepsin L1 [Cricetulus griseus]
          Length = 333

 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 125/324 (38%), Positives = 171/324 (52%), Gaps = 24/324 (7%)

Query: 44  DHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVT---- 99
           +   NA+ H   +KS + + Y T EE ++R  V++ N++  +          HG T    
Sbjct: 22  NQTFNAQWH--KWKSTYRRLYGTNEE-EWRRAVWEKNMKMIELHNGEYSEGKHGYTMEMN 78

Query: 100 KFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACG 159
            F D+T  EFR+   G   +        + P++    LP   DWR+ G VT VK+QG CG
Sbjct: 79  AFGDMTNEEFRQLVNGYKHQKHRKGKVFQEPLML--QLPKSVDWREKGCVTPVKNQGQCG 136

Query: 160 SCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEY 219
           SCW+FSA GALEG   L TG LVSLSEQ LVDC            + GCNGGLM+ AF+Y
Sbjct: 137 SCWAFSACGALEGQMCLKTGVLVSLSEQNLVDCSQ-------AEGNQGCNGGLMDFAFQY 189

Query: 220 ILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVG 279
           +L   G++ E+ YPY   D G+CK+     AA  + +  I   E  +   +   GP+A+ 
Sbjct: 190 VLNNKGLDSEESYPYEAKD-GTCKYKPEFAAANDTGYVDIPQLEKALMKAVATVGPIAIA 248

Query: 280 INAVW--MQTYIGGVSC-PYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGEN 336
           I+A     Q Y  G+   P    K LDHGVL+VGY   GF      +K YWI+KNSWG +
Sbjct: 249 IDASHPSFQFYSSGIYYEPNCSSKELDHGVLVVGY---GFEGTDSNKKKYWIVKNSWGSS 305

Query: 337 WGENGYYKICMGRNV-CGVDSMVS 359
           WG  G++ I   +N  CGV +  S
Sbjct: 306 WGMGGFFHIAKDKNNHCGVATAAS 329


>gi|161408097|dbj|BAF94152.1| cathepsin L-like cysteine protease 2 [Plautia stali]
          Length = 334

 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 126/323 (39%), Positives = 175/323 (54%), Gaps = 35/323 (10%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKF-------SDLT 105
           F+LFK    K Y  + E  YR ++F  N +R ++    +     G   F       +D+ 
Sbjct: 27  FTLFKKFHRKEYDNELEESYRKKIFLENKKRIEKH---NSRYKQGKVSFKLKLNHLADML 83

Query: 106 PSEFRRQFLGLNRRLRLPADA-QKAPILPTN--DLPTDFDWRDHGAVTGVKDQGACGSCW 162
             E+   +LG N+  +   +  Q    +P     L  + DWR  GAVT VK+QG CGSCW
Sbjct: 84  IHEYSDVYLGFNKSSKANNNKLQSYTFIPPAHVTLNKEVDWRTKGAVTPVKNQGHCGSCW 143

Query: 163 SFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSC-DSGCNGGLMNSAFEYIL 221
           +FS TGALEG +F  TG+LVSLSEQ LVDC        SGS  ++GC GGLM++AF+YI 
Sbjct: 144 AFSTTGALEGQNFRKTGKLVSLSEQNLVDC--------SGSYGNNGCEGGLMDNAFQYIK 195

Query: 222 KAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVGI 280
           +  G++ EK YPY G D  +C+F K+ I A  S F  +   DE+ +   +   GP++V I
Sbjct: 196 ENHGIDTEKSYPYEGED-ETCRFRKTSIGATDSGFVDITQGDEEALMQAVATIGPISVAI 254

Query: 281 NAVW--MQTYIGGVSC-PYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENW 337
           +A     Q Y  GV   P    + LDHGVL+VGYG           + YW++KNSWG  W
Sbjct: 255 DASHQSFQFYSEGVYYEPECSSENLDHGVLVVGYGVE-------DNQKYWLVKNSWGTQW 307

Query: 338 GENGYYKICMGR-NVCGVDSMVS 359
           G+ GY K+   + N CG+ +  S
Sbjct: 308 GDGGYIKMARDQDNNCGIATQAS 330


>gi|391333248|ref|XP_003741031.1| PREDICTED: uncharacterized protein LOC100898636 [Metaseiulus
           occidentalis]
          Length = 642

 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 120/313 (38%), Positives = 177/313 (56%), Gaps = 30/313 (9%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLL-DPTAVH---GVTKFSDLTPSE 108
           + L+K    K+Y  +EE   R R+F+ N+       LL D   V    G+++ +D TP+E
Sbjct: 19  WELYKRIHGKSYDVEEE-SMRRRIFEKNVAMINAHNLLHDLKQVSYRMGLSRLTDATPAE 77

Query: 109 FRRQFLGLNRRLRLPADAQKAPILPT---NDLPTDFDWRDHGAVTGVKDQGACGSCWSFS 165
            +     LN    LP    +   L T    DLP   DW   G VT VKDQG CG+CW+F+
Sbjct: 78  VQ-ALKCLN--FTLPNKTSRKSTLGTLQRQDLPEAVDWTQQGYVTPVKDQGKCGACWTFA 134

Query: 166 ATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGG 225
           ATGA+EG HF +TG LVSLSEQ ++DC          +  +GC+GGL   AF+Y+  +GG
Sbjct: 135 ATGAIEGQHFKATGNLVSLSEQNILDCVKT-------ATSNGCSGGLFVEAFDYLKNSGG 187

Query: 226 VEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISS-DEDQMAANLVKHGPLAVGINA-- 282
           ++ E+ YPY  + GG+C+F +  +AA VS +  IS+ +E ++   +   GP++VGI++  
Sbjct: 188 IDAEESYPYEAS-GGTCRFRQDSVAATVSGYQAISAGNEAELQEAVATIGPISVGIDSGH 246

Query: 283 VWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGY 342
              Q Y GG+     C ++L H VL+VGYG+          + YW++KNSWG ++G  GY
Sbjct: 247 PGFQHYTGGIYYEPECTEHLSHAVLVVGYGTE-------NGEDYWLVKNSWGASYGLQGY 299

Query: 343 YKICMGR-NVCGV 354
            K+   R N CG+
Sbjct: 300 IKMARNRNNNCGI 312



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 125/326 (38%), Positives = 170/326 (52%), Gaps = 30/326 (9%)

Query: 46  LLNAEH-HFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLL-DPTAVH---GVTK 100
           LL   H  + L+K   +K Y   E+   R R+F+ N+       LL D   V    G+++
Sbjct: 331 LLKFSHADWDLYKRVQNKNYGVAED-SMRRRIFEKNVAMINGHNLLHDLKRVSYRMGLSR 389

Query: 101 FSDLTPSEFR-RQFLGLNRRLRLPADAQKA-PILPTNDLPTDFDWRDHGAVTGVKDQGAC 158
           F+D TP E R  + L +N  +      ++    + ++DL    DWR  G VT VK+QG C
Sbjct: 390 FTDSTPEEMRAMRCLNINVSMTTGGPHEEVFDAIESSDLSEAIDWRQQGYVTPVKNQGNC 449

Query: 159 GSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFE 218
           GSCW+FSATGA+EG HF +TG L SLSEQ LVDC  E           GC+GG    AF+
Sbjct: 450 GSCWAFSATGAVEGQHFKATGRLESLSEQNLVDCVKE---------SKGCDGGFFEQAFQ 500

Query: 219 YILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVI-SSDEDQMAANLVKHGPLA 277
           YI   GG+  E  YPY   D GSC+F +  I A VS +  I    E  +   +   GP++
Sbjct: 501 YIKDNGGINTEDSYPYEAFD-GSCRFREDSIGATVSGYQTIPKGSEADLQKAVSTIGPIS 559

Query: 278 VGINAV--WMQTYIGGVSC-PYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWG 334
           V I+      Q Y  GV   P      LDH VL+VGYGS G        + YW++KNSWG
Sbjct: 560 VAIDVSNPSFQNYREGVYYEPSCSSSNLDHAVLVVGYGSDG-------GEDYWLVKNSWG 612

Query: 335 ENWGENGYYKICMGR-NVCGVDSMVS 359
            ++GE GY ++   + N CG+ S  +
Sbjct: 613 TSFGEQGYVRMARNKGNNCGIASAAA 638


>gi|449522968|ref|XP_004168497.1| PREDICTED: xylem cysteine proteinase 1-like [Cucumis sativus]
          Length = 348

 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 138/370 (37%), Positives = 191/370 (51%), Gaps = 42/370 (11%)

Query: 4   LILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKT 63
           + LS LL L +        +   D +++    P D   S D L+     F  + S   K 
Sbjct: 1   MALSKLLPLAMCMSFFVVTSFGKDFSIV-GYWPED-LTSMDRLIEL---FEEWISNHGKI 55

Query: 64  YATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGL----NRR 119
           Y T EE  +RF VFK NL+          +   GV +F+DLT  EF+  +LGL    +R 
Sbjct: 56  YETIEEKWHRFEVFKDNLKHIDETNKKVTSYWLGVNEFADLTHQEFKNMYLGLKVESSRT 115

Query: 120 LRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTG 179
            + P +     ++   DLP   DWR  GAVT VK+QG+CGSCW+FS   A+EG + +  G
Sbjct: 116 RQSPEEFTYKDVV---DLPKSVDWRKKGAVTRVKNQGSCGSCWAFSTVAAVEGINKIVGG 172

Query: 180 ELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDG 239
            L SLSEQ+L+DCD           ++GC+GGLM+ AF +I+ +GG+ +E+DYPY   + 
Sbjct: 173 NLTSLSEQELIDCDR--------PYNNGCHGGLMDYAFSFIVSSGGLHKEEDYPYLEVE- 223

Query: 240 GSCKFDKSKI-AAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGV-SCP 295
            +C   K ++    +S +  +  + +      + H PL+V I A     Q Y GGV   P
Sbjct: 224 STCDNKKGELEVVTISGYKDVPENNEASLIKALAHQPLSVAIEASGRDFQFYSGGVFDGP 283

Query: 296 YICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRN----- 350
             CG  LDHGV  VGYGSS       K   Y I+KNSWG  WGE GY  I M RN     
Sbjct: 284 --CGTQLDHGVTAVGYGSS-------KGVDYIIVKNSWGPKWGEKGY--IRMKRNTGKPA 332

Query: 351 -VCGVDSMVS 359
            +CG++ M S
Sbjct: 333 GLCGINKMAS 342


>gi|155970232|gb|ABU41785.1| cysteine protease [Rosa x borboniana]
          Length = 357

 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 130/348 (37%), Positives = 188/348 (54%), Gaps = 35/348 (10%)

Query: 26  DDDAMIRQVVPSDGEQSEDHLLNA------EHHFSLFKSKFSKTYATQEEHDYRFRVFKA 79
           D+ + IR +VP    + ED ++           F+ F  ++ K Y + EE   RF +F  
Sbjct: 26  DESSPIR-LVPDGLRELEDQVVQVLGQVCHVRSFARFAYRYEKRYESVEEMGRRFEIFAE 84

Query: 80  N--LRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDL 137
           N  L R+  R+ L  +   GV +F+D T  EF+R  LG  +     A  +    L     
Sbjct: 85  NKKLIRSTNRKGL--SYKLGVNRFADWTWEEFQRHRLGAAQNCS--ATTKGNHKLTDAVP 140

Query: 138 PTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECD 197
           P   +WRD G VT VKDQG CGSCW+FS TGALE A+  + G+ +S SEQQLVDC     
Sbjct: 141 PLTKNWRDEGIVTPVKDQGHCGSCWTFSTTGALEAAYVQAFGKQISPSEQQLVDC----- 195

Query: 198 PEESGSCDS-GCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAV-SN 255
              +G+ ++ GC+GGL + AFEYI   GG++ E+ YPYT  D G+CKF    +   V  +
Sbjct: 196 ---AGAFNNFGCSGGLPSQAFEYIKYNGGLDTEQAYPYTAVD-GACKFSSENVGVRVLDS 251

Query: 256 FSVISSDEDQMAANLVKHGPLAVGINAVW-MQTYIGGVSCPYICGKY---LDHGVLIVGY 311
            ++  +DE+++   +    P++V    V   + Y  GV     CG     ++H VL VGY
Sbjct: 252 VNITLNDEEELKHAVAFVRPVSVAFQVVQDFRLYKSGVYTSETCGNTPMDVNHAVLAVGY 311

Query: 312 GSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVS 359
           G            PYW+IKNSWG++WG+NGY+K+  G+N+CGV +  S
Sbjct: 312 GVENGV-------PYWLIKNSWGQSWGDNGYFKMEYGKNMCGVATCAS 352


>gi|157093357|gb|ABV22333.1| cysteine protease 1 [Noctiluca scintillans]
          Length = 338

 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 128/312 (41%), Positives = 163/312 (52%), Gaps = 35/312 (11%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           F+ FK+K+ K Y    E   RF +FKAN+         + T   GV +F+DLT  EF   
Sbjct: 27  FNNFKTKYGKVYNGINEDAVRFGIFKANVDIIYATNARNLTFALGVNEFTDLTQEEFAAS 86

Query: 113 FLGLNRRLRLPADAQKA-PILPTND-----LPTDFDWRDHGAVTGVKDQGACGSCWSFSA 166
           + GL      PA      P L T++     L +  DW   G VT VK+QG CGSCWSFS 
Sbjct: 87  YTGLK-----PASLWSGLPRLSTHEYNGAPLASSVDWTTQGVVTPVKNQGQCGSCWSFST 141

Query: 167 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGV 226
           TGALEGA  LSTG LVSLSEQQ  DCD         + DSGCNGG M++AF +  K   +
Sbjct: 142 TGALEGAWALSTGNLVSLSEQQFEDCD---------TTDSGCNGGWMDNAFSFA-KKNSI 191

Query: 227 EREKDYPYTGTDGGSCKFDKSKIA---AAVSNFSVISSDEDQMAANLVKHGPLAVGINA- 282
             E  YPYT TD G+C     ++      V  ++ +S+D +Q   + V   P+++ I A 
Sbjct: 192 CTEGSYPYTATD-GTCNLSGCQVGIPQGGVVGYTDVSTDSEQAMMSAVAQQPVSIAIEAD 250

Query: 283 -VWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENG 341
               Q Y  GV     CG  LDHGVL VGYGS            YW +KNSWG +WGE G
Sbjct: 251 QYSFQLYSSGV-LTASCGTRLDHGVLAVGYGSE-------AGTDYWKVKNSWGSSWGEQG 302

Query: 342 YYKICMGRNVCG 353
           Y ++  G+   G
Sbjct: 303 YVRLQRGKGGAG 314


>gi|94480716|emb|CAI91577.1| cathepsin L [Aphrocallistes vastus]
          Length = 329

 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 119/311 (38%), Positives = 172/311 (55%), Gaps = 25/311 (8%)

Query: 56  FKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLG 115
           +K K++++Y   EE   R +++  N+   K       +      +F+DLT  E+R+ +LG
Sbjct: 33  WKLKYNRSYGLDEE--LRKKIWANNMLYVKEFNAEGHSYKLAANQFADLTNLEYRQIYLG 90

Query: 116 LNRRLRLPADAQKAPI---LPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEG 172
            +   RL    +       +   DLPT  DWR  G VT VK+QG CGSCWSFSATG+LEG
Sbjct: 91  YDNEARLSRKREGKVFQRKMKDEDLPTTVDWRSKGVVTPVKNQGQCGSCWSFSATGSLEG 150

Query: 173 AHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDY 232
            + + +G+LVS SEQ+LVDC        +   + GC GGLM+ AF+Y  +    E+E DY
Sbjct: 151 QYAIKSGKLVSFSEQELVDCS-------TSLGNHGCQGGLMDYAFKY-WETNLAEKESDY 202

Query: 233 PYTGTDGGSCKFDKSKIAAAVSNFSVISSDE-DQMAANLVKHGPLAVGINA--VWMQTYI 289
            YT  + G CK++        S+F+ I S+  D +   +   GP+AV ++A     Q Y 
Sbjct: 203 TYTAKN-GKCKYNAQLGVTKDSSFTDIPSENCDALKEAVANKGPIAVAMDASHTSFQMYH 261

Query: 290 GGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMG 348
            G+  P++C K  LDHGVL+VGYG+            YW+IKNSWG  WG +GY+KI M 
Sbjct: 262 SGIYTPFLCSKTKLDHGVLVVGYGTDNGV-------DYWLIKNSWGMAWGMDGYFKIEMK 314

Query: 349 RNVCGVDSMVS 359
            + CG+ +  S
Sbjct: 315 SDKCGICTQAS 325


>gi|185135439|ref|NP_001117777.1| procathepsin L precursor [Oncorhynchus mykiss]
 gi|14582899|gb|AAK69706.1|AF358668_1 procathepsin L [Oncorhynchus mykiss]
          Length = 338

 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 129/321 (40%), Positives = 171/321 (53%), Gaps = 24/321 (7%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH----GVTKFSDLT 105
           E H+ L+K+  SK Y   EE  +R  V++ NL++ +   L      H    G+  F D+T
Sbjct: 27  EDHWHLWKNWHSKHYHESEE-GWRRMVWEKNLKKIEIHNLEHTMGKHSYRLGMNHFGDMT 85

Query: 106 PSEFRRQFLGLNRRLRLPADAQKAPILPTNDL--PTDFDWRDHGAVTGVKDQGACGSCWS 163
             EFR+   G  +        + +  +  N L  P   DWR+ G VT VKDQG+CGSCW+
Sbjct: 86  NEEFRQTMNGYKQTTE--RKFKGSLFMEPNYLQAPKAVDWREKGYVTPVKDQGSCGSCWA 143

Query: 164 FSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA 223
           FS TGA+EG  F  TG+LVSLSEQ LVDC     PE     + GCNGGLM+ AF+YI   
Sbjct: 144 FSTTGAMEGQQFRKTGKLVSLSEQNLVDCSR---PE----GNEGCNGGLMDQAFQYIQDN 196

Query: 224 GGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVGINA 282
            G++ E+ YPY GTD   C +     AA  + F  + S  E  M   +   GP++V I+A
Sbjct: 197 AGLDTEESYPYVGTDEDPCHYKPEFSAANETGFVDIPSGKEHAMMKAVAAVGPVSVAIDA 256

Query: 283 --VWMQTYIGGVSCPYIC-GKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGE 339
                Q Y  G+     C  + LDHGVL+VGY   GF       K YWI+KNSW E WG+
Sbjct: 257 GHESFQFYESGIYYEKECSSEELDHGVLVVGY---GFEGEDVDGKKYWIVKNSWSEKWGD 313

Query: 340 NGYYKICMGR-NVCGVDSMVS 359
            GY  +   R N CG+ +  S
Sbjct: 314 KGYIYMAKDRKNHCGIATASS 334


>gi|340504799|gb|EGR31212.1| papain family cysteine protease, putative [Ichthyophthirius
           multifiliis]
          Length = 250

 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 99/223 (44%), Positives = 137/223 (61%), Gaps = 16/223 (7%)

Query: 137 LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHEC 196
           LP+ FDWR+ G +T VK Q  CG CW+F+ TG +E  + L   +LV+ SEQQL+DCD   
Sbjct: 39  LPSYFDWREQGIITPVKYQDTCGGCWTFATTGVIESQYALKYNKLVNFSEQQLIDCD--- 95

Query: 197 DPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNF 256
                 S + GC GGLM  A++ I + GG+E  +DY       G CK D +K++A V N+
Sbjct: 96  ------SINDGCRGGLMTDAYKAIQEMGGLETSEDYGEYLNSKGQCKIDSNKVSAKVINW 149

Query: 257 SVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGF 316
             IS DE+ +   LV++GP+AVG+NA ++Q Y GG+  P +C   ++H VLIVGYG    
Sbjct: 150 YQISEDEEAIRRELVQNGPIAVGVNARFLQFYQGGILDPKLCDDSINHAVLIVGYGEE-- 207

Query: 317 APIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVS 359
                  K YWIIKN WG++WG NGY+K+  G+  CGV +  S
Sbjct: 208 -----NGKKYWIIKNQWGKSWGINGYFKLVRGKKQCGVHTYAS 245


>gi|194689248|gb|ACF78708.1| unknown [Zea mays]
 gi|414885653|tpg|DAA61667.1| TPA: cysteine protease2 [Zea mays]
          Length = 360

 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 122/325 (37%), Positives = 174/325 (53%), Gaps = 44/325 (13%)

Query: 52  HFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRR 111
            F+ F  ++ K+Y +  E   RFR+F  +L+  +       +   G+ +F+D++  EFR 
Sbjct: 58  RFARFAVRYGKSYESAAEVHKRFRIFSESLQLVRSTNRKGLSYRLGINRFADMSWEEFRA 117

Query: 112 QFLGL----------NRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSC 161
             LG           N R+R  A A          LP   DWR+ G V+ VK+QG CGSC
Sbjct: 118 TRLGAAQNCSATLTGNHRMRAAAVA----------LPETKDWREDGIVSPVKNQGHCGSC 167

Query: 162 WSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYIL 221
           W+FS TGALE A+  +TG+ +SLSEQQL+DC    +       + GCNGGL + AFEYI 
Sbjct: 168 WTFSTTGALEAAYTQATGKPISLSEQQLIDCGFAFN-------NFGCNGGLPSQAFEYIK 220

Query: 222 KAGGVEREKDYPYTGTDGGSCKFDKSKIAAAV---SNFSVISSDEDQMAANLVKHGPLAV 278
             GG++ E+ YPY G + G CKF    +   V    N ++ + DE + A  LV+  P++V
Sbjct: 221 YNGGLDTEESYPYQGVN-GICKFKNENVGVKVLDSVNITLGAEDELKDAVGLVR--PVSV 277

Query: 279 GINAVW-MQTYIGGVSCPYICGKY---LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWG 334
               +   + Y  GV     CG     ++H VL VGYG            PYW+IKNSWG
Sbjct: 278 AFEVITGFRLYKSGVYTSDHCGTTPMDVNHAVLAVGYGVE-------DGVPYWLIKNSWG 330

Query: 335 ENWGENGYYKICMGRNVCGVDSMVS 359
            +WG+ GY+K+ MG+N+CGV +  S
Sbjct: 331 ADWGDEGYFKMEMGKNMCGVATCAS 355


>gi|413953668|gb|AFW86317.1| hypothetical protein ZEAMMB73_339067 [Zea mays]
          Length = 433

 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 123/323 (38%), Positives = 177/323 (54%), Gaps = 29/323 (8%)

Query: 42  SEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH-GVTK 100
           S+D ++ A H    + +++S+ Y    E   RF VFKAN++  +            GV +
Sbjct: 121 SDDSVMVARHE--QWMAQYSRVYKDASEKARRFEVFKANVQFIESFNAGGNNKFWLGVNQ 178

Query: 101 FSDLTPSEFR--RQFLGL-NRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGA 157
           F+DLT  EFR  +   GL +  +++P   +   +   + LPT  DWR  GAVT +KDQG 
Sbjct: 179 FADLTNDEFRSTKTNKGLKSSNMKIPTGFRYENV-SADALPTTIDWRTKGAVTPIKDQGQ 237

Query: 158 CGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAF 217
           CG CW+FSA  A EG   +STG+LVSL+EQ+LVDCD   +       D GC GGLM+ AF
Sbjct: 238 CGCCWAFSAVAATEGIVKISTGKLVSLAEQELVDCDVHGE-------DQGCEGGLMDDAF 290

Query: 218 EYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLA 277
           ++I+K GG+  E  YPYT  D G CK   S  AA +  +  + ++++      V + P++
Sbjct: 291 KFIIKNGGLTTESSYPYTAAD-GKCK-SGSNSAATIKGYEDVPANDEAALMKAVANQPVS 348

Query: 278 VGINA--VWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGE 335
           V ++   +  Q Y GGV     CG  LDHG+  +GYG +           YW++KNSWG 
Sbjct: 349 VAVDGGDMTFQFYSGGVMTGS-CGTDLDHGIAAIGYGKTS------DGTKYWLMKNSWGT 401

Query: 336 NWGENGYYK----ICMGRNVCGV 354
            WGENGY +    I   R +CG+
Sbjct: 402 TWGENGYLRMEKDISDKRGMCGL 424


>gi|254746340|emb|CAX16635.1| putative C1A cysteine protease precursor [Manduca sexta]
          Length = 342

 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 126/317 (39%), Positives = 171/317 (53%), Gaps = 32/317 (10%)

Query: 56  FKSKFSKTYATQEEHDYRFRVFKANLRR-AKRRQLLDPTAVH---GVTKFSDLTPSEFRR 111
           FK +  K Y ++ E  +R +++  N  + AK  QL +   V    G  K++D+   EF +
Sbjct: 31  FKMQHDKKYDSEVEDRFRMKIYAENKHKIAKHNQLYEQGLVSYKLGPNKYTDMLHHEFIQ 90

Query: 112 QFLGLNRRLR-------LPADAQKAPILPTNDL--PTDFDWRDHGAVTGVKDQGACGSCW 162
              G NR  +          D + A  +P   +  P   DW   GAVT VKDQG CGSCW
Sbjct: 91  AMNGYNRTAKHNKGLYGKKHDVRGATFIPPAHVKYPDHVDWTKKGAVTEVKDQGKCGSCW 150

Query: 163 SFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK 222
           +FS TGALEG HF  +G LVSLSEQ L+DC        S   ++GCNGGLM++AF+YI  
Sbjct: 151 AFSTTGALEGQHFRKSGYLVSLSEQNLIDC-------SSTYGNNGCNGGLMDNAFKYIKD 203

Query: 223 AGGVEREKDYPYTGTDGGSCKFD-KSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGIN 281
            GG++ EK YPY G D   C+++ K+  A  V    + S DE+++   +   GP++V I+
Sbjct: 204 NGGIDTEKTYPYEGVD-DKCRYNPKNSGAEDVGFVDIPSGDEEKLMQAVATVGPVSVAID 262

Query: 282 AVW--MQTYIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWG 338
           A     Q Y GGV     C    LDHGVL+VGYG+            YW++KNSW   WG
Sbjct: 263 ASQNSFQFYSGGVYYDTECSSTDLDHGVLVVGYGTDEAGG------DYWLVKNSWSRTWG 316

Query: 339 ENGYYKICMGR-NVCGV 354
           E GY K+   R N CG+
Sbjct: 317 ELGYIKMARNRDNHCGI 333


>gi|225719768|gb|ACO15730.1| Cathepsin L1 precursor [Caligus clemensi]
          Length = 338

 Score =  201 bits (512), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 129/321 (40%), Positives = 171/321 (53%), Gaps = 24/321 (7%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH----GVTKFSDLT 105
           E H+ L+K+  SK Y   EE  +R  V++ NL++ +   L      H    G+  F D+T
Sbjct: 27  EDHWHLWKNWHSKNYHASEE-GWRRMVWEKNLKKIEIHNLEHTMGKHSHRLGMNHFGDMT 85

Query: 106 PSEFRRQFLGLNRRLRLPADAQKAPILPTNDL--PTDFDWRDHGAVTGVKDQGACGSCWS 163
             EFR+   G  +        + +  +  N L  P   DWR+ G VT VKDQG+CGSCW+
Sbjct: 86  NEEFRQTMNGYKQTTE--RKFKGSLFMEPNYLQAPKAVDWREKGYVTPVKDQGSCGSCWA 143

Query: 164 FSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA 223
           FS TGA+EG  F  TG+LVSLSEQ LVDC     PE     + GCNGGLM+ AF+YI   
Sbjct: 144 FSTTGAMEGQPFRKTGKLVSLSEQNLVDCSR---PE----GNEGCNGGLMDQAFQYIQDN 196

Query: 224 GGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVGINA 282
            G++ E+ YPY GTD   C +     AA  + F  + S  E  M   +   GP++V I+A
Sbjct: 197 AGLDTEESYPYVGTDEDPCHYKPEFSAANETGFVDIPSGKEHAMMKAVAAVGPVSVAIDA 256

Query: 283 --VWMQTYIGGVSCPYIC-GKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGE 339
                Q Y  G+     C  + LDHGVL+VGY   GF       K YWI+KNSW E WG+
Sbjct: 257 GHESFQFYESGIYYEKECSSEELDHGVLVVGY---GFEGEDVDGKKYWIVKNSWSEKWGD 313

Query: 340 NGYYKICMGR-NVCGVDSMVS 359
            GY  +   R N CG+ +  S
Sbjct: 314 KGYIYMAKDRKNHCGIATASS 334


>gi|12024965|gb|AAG45727.1| cathepsin L-like cysteine protease [Leishmania chagasi]
          Length = 381

 Score =  201 bits (512), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 123/311 (39%), Positives = 166/311 (53%), Gaps = 43/311 (13%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           F  FK  + + Y T  E   R   F+ NL   +  Q  +P A  G+TKF DL+ +EF  +
Sbjct: 38  FEEFKRTYRRAYGTLAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 113 FLGLNRRLRLPADAQKA------PILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSA 166
           +L  N      A  Q A           + +P   DWR+ GAVT VK+QGACGSCW+FSA
Sbjct: 98  YL--NGAAYFAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSCWAFSA 155

Query: 167 TGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK--AG 224
            G +E     +   LVSLSEQQLV CD +         D+GCNGGLM  AFE++L+   G
Sbjct: 156 VGNIESQWARAGHGLVSLSEQQLVSCDDK---------DNGCNGGLMLQAFEWLLRHMYG 206

Query: 225 GVEREKDYPYTGTDGGSCK-FDKSKI--AAAVSNFSVISSDEDQMAANLVKHGPLAVGIN 281
            V  EK YPYT  +G   +  + SK+   A +  + +I S+E  MAA L ++GP+A+ ++
Sbjct: 207 IVFTEKSYPYTSGNGDVAECLNSSKLVPGAQIDGYVMIPSNETVMAAWLAENGPIAIAVD 266

Query: 282 AVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENG 341
           A    +Y                GVL+VGY  +G         PYW+IKNSWGE+WGE G
Sbjct: 267 ASSFMSY--------------QSGVLLVGYNKTGGV-------PYWVIKNSWGEDWGEKG 305

Query: 342 YYKICMGRNVC 352
           Y ++ MG N C
Sbjct: 306 YVRVAMGLNAC 316


>gi|405958751|gb|EKC24845.1| Cathepsin L [Crassostrea gigas]
          Length = 330

 Score =  201 bits (512), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 122/319 (38%), Positives = 168/319 (52%), Gaps = 25/319 (7%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLL----DPTAVHGVTKFSDLT 105
           +  + L+     K Y  +EE   R  +++ NL   ++  L     D +   G+ ++ D+T
Sbjct: 24  DSEWQLYLKAHGKQYGAEEEARRRV-IWEGNLDYIEKHNLAADRGDYSFWLGMNEYGDMT 82

Query: 106 PSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFS 165
             EFR    G   R      +   P     DLP   DWR  G VT +K+QG CGSCWSFS
Sbjct: 83  NEEFRSTMNGYKMRNGTSRGSLYLPPSNIGDLPDTVDWRPKGYVTPIKNQGQCGSCWSFS 142

Query: 166 ATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGG 225
           ATG+LEG  F  TG+L SLSEQ LVDC  +         + GC GGLM+ AF+YI    G
Sbjct: 143 ATGSLEGQTFKKTGKLPSLSEQNLVDCSQK-------QGNHGCQGGLMDDAFQYIKDNNG 195

Query: 226 VEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVI-SSDEDQMAANLVKHGPLAVGINAVW 284
           ++ E  YPY   + G C+F+ + + A  S F+ I S  E  + + +   GP+AV I+A  
Sbjct: 196 IDTESSYPYEAKN-GKCRFNAANVGATDSGFTDIKSKSESDLQSAVATVGPIAVAIDASH 254

Query: 285 M--QTYIGGVSCPYICGK-YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENG 341
           M  Q Y  GV   + C +  LDHGVL VGYG+          K YW++KNSWGE+WG+ G
Sbjct: 255 MSFQLYKSGVYHEFFCSETRLDHGVLAVGYGTE-------SGKDYWLVKNSWGESWGQKG 307

Query: 342 YYKICMG-RNVCGVDSMVS 359
           Y  +    RN CG+ +  S
Sbjct: 308 YIMMSRNKRNNCGIATSAS 326


>gi|298713906|emb|CBJ33775.1| Cathepsin-like proteinase [Ectocarpus siliculosus]
          Length = 462

 Score =  201 bits (512), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 136/367 (37%), Positives = 176/367 (47%), Gaps = 53/367 (14%)

Query: 36  PSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAV 95
           P   E S+  L   E  F  F  KF K+Y   +E   RF VFK NL+R   R        
Sbjct: 112 PRLSELSDQEL---ESLFQEFGIKFEKSYENDDEKAMRFEVFKRNLKRIDERNSKSLGVK 168

Query: 96  HGVTKFSDLTPSEF-----------------RRQFLGLNRRLRLPADAQKAPILP----- 133
           + VT ++DLT  EF                 R + +       +    Q     P     
Sbjct: 169 YDVTMWTDLTHEEFKGYQNYGKISDEAKEVARSKAMSTKDASDMYESCQSCTRFPELEQY 228

Query: 134 -TNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDC 192
            T DLPT+FDWRD+GAVT VK+Q  CGSCW+FS TG LEGA +LS   L SLSEQQLV C
Sbjct: 229 ITGDLPTEFDWRDYGAVTPVKNQAYCGSCWTFSTTGCLEGAWYLSGHPLESLSEQQLVAC 288

Query: 193 DHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYT--------GTDGGSCKF 244
           D         S + GCNGG  + + +YI K GG+  E  YPY         G    S   
Sbjct: 289 DT--------SYNQGCNGGWPSISMDYISKNGGIVPESIYPYRKVFMNGHLGDPVCSDVV 340

Query: 245 DKSKIAAAVSNFSVISSD---EDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKY 301
            +   AA ++    ++ D   E+ MA  L+ +GPL+V ++A+ M  Y  G+     C   
Sbjct: 341 KEGNYAATLAIEVALAEDSMTEEAMARWLILNGPLSVALDAMGMDYYSEGIDMGEYCEPL 400

Query: 302 -LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSS 360
            +DH VLIVGYG             YWIIKNSW   WGE GYY++  G N CG+   V++
Sbjct: 401 EIDHAVLIVGYGEEDGV-------KYWIIKNSWKYLWGERGYYRLVRGVNACGIADDVTT 453

Query: 361 VAAIHTT 367
           +     T
Sbjct: 454 IIVADAT 460


>gi|165969032|ref|YP_001650932.1| peptidase [Orgyia leucostigma NPV]
 gi|164663528|gb|ABY65748.1| peptidase [Orgyia leucostigma NPV]
          Length = 328

 Score =  201 bits (512), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 113/329 (34%), Positives = 176/329 (53%), Gaps = 33/329 (10%)

Query: 46  LLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLT 105
           LL A  +F  F + + K Y    E   R+ +FK NL     +  L+ TAV+ + KFSDL+
Sbjct: 22  LLKAPDYFESFVANYQKNYNDDLEKSKRYTIFKDNLEEINVKNRLNDTAVYRINKFSDLS 81

Query: 106 PSEFRRQFLGLNRRLRLPADAQ---KAPIL--PTNDLPTDFDWRDHGAVTGVKDQGACGS 160
            +E   ++ GLN     P++     K  +L  P    P +FDWR    VT +K+QG+CG+
Sbjct: 82  KTEIISKYTGLN----APSETTNFCKTIVLDQPPGKGPLNFDWRQQNKVTSIKNQGSCGA 137

Query: 161 CWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYI 220
           CW+F+   ++E  + +     ++LSEQQL+DCD+          D GC GGL+++AFE +
Sbjct: 138 CWAFATLASIESQYAIRNDRHINLSEQQLIDCDY---------VDMGCYGGLLHTAFEQM 188

Query: 221 LKAGGVEREKDYPYTGTDGGSCKF----DKSKIAAAVSNFSVISSDEDQMAANLVKHGPL 276
           ++ GGV++E +YPY G +   C+     D S +      +  +   E+++   L   GP+
Sbjct: 189 IQMGGVKQEHEYPYAGVN-KQCELNDITDDSFVVRIKGCYRYVVVREEKLKDLLRAVGPI 247

Query: 277 AVGINAVWMQTYIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGE 335
            + I+A  +  Y  GV     C  Y L+H VL+VGYG            PYW  KN+WG 
Sbjct: 248 PIAIDASGIVNYYKGVIN--YCENYGLNHAVLLVGYGVDNGV-------PYWTFKNTWGV 298

Query: 336 NWGENGYYKICMGRNVCGVDSMVSSVAAI 364
           +WGENGY+++    N CG+ + ++S A I
Sbjct: 299 DWGENGYFRLRQNINACGMANELASSAVI 327


>gi|357627452|gb|EHJ77132.1| cathepsin L-like protease [Danaus plexippus]
          Length = 341

 Score =  201 bits (512), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 136/368 (36%), Positives = 191/368 (51%), Gaps = 51/368 (13%)

Query: 10  LLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEE 69
           +LL+L +V+A+  AV+  D ++R+                   ++ FK +  K Y ++ E
Sbjct: 3   ILLVLCAVVAAGTAVSFFD-LVRE------------------EWNTFKLEHKKQYDSETE 43

Query: 70  HDYRFRVFKANLRR-AKRRQLLDPTAVH---GVTKFSDLTPSEFRRQFLGLNRRLRLPA- 124
             +R +++  N  + AK  Q      V       K+SD+   EF     G N+ ++    
Sbjct: 44  EKFRMKIYAENKHKVAKHNQRYQKGLVSYRLKTNKYSDMLHHEFVNTMNGFNKTVKHNKG 103

Query: 125 ------DAQKAPIL-PTN-DLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFL 176
                 D + A  + P N   P   DWR HGAVT VKDQG CGSCWSFS TGALEG HF 
Sbjct: 104 LYAKGNDIRGATFVSPANVAAPPTVDWRQHGAVTPVKDQGKCGSCWSFSTTGALEGQHFR 163

Query: 177 STGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTG 236
            +G LVSLSEQ L+DC        S   ++GCNGGLM++AF+YI    G++ EK YPY  
Sbjct: 164 KSGFLVSLSEQNLIDC-------SSAYGNNGCNGGLMDNAFKYIKDNDGIDTEKTYPYEA 216

Query: 237 TDGGSCKFD-KSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVS 293
            D   C+++ K+  A  V    + + DE ++   L   GP++V I+A     Q Y  GV 
Sbjct: 217 VD-DKCRYNPKNSGAEDVGFVDIPAGDEHKLMLALATVGPVSVAIDASQESFQLYSDGVY 275

Query: 294 CPYIC-GKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NV 351
               C  + LDHGVL+VGYG+            YW++KNSWG +WG+ GY K+   R N 
Sbjct: 276 YDENCSSENLDHGVLVVGYGTDEDG------GDYWLVKNSWGPSWGDEGYIKMARNRDNH 329

Query: 352 CGVDSMVS 359
           CG+ S  S
Sbjct: 330 CGIASSAS 337


>gi|255078398|ref|XP_002502779.1| cysteine endopeptidase [Micromonas sp. RCC299]
 gi|226518045|gb|ACO64037.1| cysteine endopeptidase [Micromonas sp. RCC299]
          Length = 414

 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 127/355 (35%), Positives = 181/355 (50%), Gaps = 32/355 (9%)

Query: 29  AMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQ 88
           A I Q+  + GE++   + +    F  +  K  KTY ++EE + R ++F  N    ++  
Sbjct: 44  AKINQLKAALGEKATKEVGSLSDLFHEWTQKHGKTYDSEEEKELRLKIFADNHEFVQKHN 103

Query: 89  LLDPTAVH----GVTKFSDLTPSEFRRQFLGLN---RRLRLPADA---QKAPILPTNDLP 138
                  H    G+   +DLT  EF++  LG N   R  R P DA   + A + P    P
Sbjct: 104 AEYENGEHTHFVGLNHLADLTKDEFKK-MLGYNAALRASRAPVDASTWEYADVTP----P 158

Query: 139 TDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDP 198
            + DW   GAVT VK+Q  CGSCW+FS TGA+EG + + TG+L+SLSE++L+ C      
Sbjct: 159 EEIDWVASGAVTPVKNQKQCGSCWAFSTTGAVEGVNAIKTGKLISLSEEELISC------ 212

Query: 199 EESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSV 258
             S + + GCNGGLM++ FE+I+   G++ E  + Y   +     F +   A A+  F  
Sbjct: 213 --STNGNMGCNGGLMDNGFEWIVNNRGIDTEDGWEYVAKEEKCGFFRRHHRAVAIDGFKD 270

Query: 259 ISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGF 316
           + S+++      V   P++V I A     Q Y GGV     CG  LDHGVL+VGYG    
Sbjct: 271 VPSNDEDSLMKAVSQQPVSVAIEADHQSFQLYAGGVYSAKDCGTELDHGVLLVGYGVD-- 328

Query: 317 APIRFKEKPYWIIKNSWGENWGENGYYKICMG----RNVCGVDSMVSSVAAIHTT 367
            P   K K +W IKNSWG  WGE+GY +I  G       CGV    S    + TT
Sbjct: 329 -PKSTKHKHFWKIKNSWGPAWGEDGYIRIAKGGSGVEGQCGVAMQPSYPTKLGTT 382


>gi|148907299|gb|ABR16787.1| unknown [Picea sitchensis]
          Length = 372

 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 117/307 (38%), Positives = 163/307 (53%), Gaps = 32/307 (10%)

Query: 68  EEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGL----NRRLRLP 123
           +EH  RF +FK N++        D     G+ KF+DL+  EF+   +      ++ LR  
Sbjct: 61  DEHARRFEIFKENVKHIDSVNKKDGPYKLGLNKFADLSNEEFKAMHMTTKMEKHKSLRGD 120

Query: 124 ADAQKAPILPTND--LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGEL 181
              +    +  N   LP   DWR  GAVT VK+QG CGSCW+FS   ++EG +++ TG+L
Sbjct: 121 RGVESGSFMYQNSKRLPASIDWRKKGAVTPVKNQGQCGSCWAFSTIASVEGINYIKTGKL 180

Query: 182 VSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGS 241
           VSLSEQQLVDC  E         ++GCNGGLM++AF+YI+  GG+  E +YPYT  + G 
Sbjct: 181 VSLSEQQLVDCSKE---------NAGCNGGLMDNAFQYIIDNGGIVTEDEYPYT-AEAGE 230

Query: 242 C---KFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPY 296
           C   K +   IA  +  F  + ++ +      V H P+++ I A     Q Y  GV    
Sbjct: 231 CSTTKIESKSIATIIDGFEDVPANNEGALKKAVAHQPVSIAIEASGHDFQFYSTGVFTGK 290

Query: 297 ICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMG----RNVC 352
            CG  LDHGV++VGYG S   P       YWI++NSWG  WGE GY ++  G       C
Sbjct: 291 -CGTELDHGVVVVGYGKS---PEGIN---YWIVRNSWGPEWGEQGYIRMQRGIEATEGKC 343

Query: 353 GVDSMVS 359
           G+    S
Sbjct: 344 GISMQAS 350


>gi|312306194|gb|ADQ73946.1| cathepsin L [Paralithodes camtschaticus]
          Length = 324

 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 126/319 (39%), Positives = 170/319 (53%), Gaps = 32/319 (10%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLR--RAKRRQLL--DPTAVHGVTKFSDLTPSE 108
           F  FK ++ + YAT +E  YR  V+  N+    A   Q    + T +  + +F D+T  E
Sbjct: 22  FHQFKVQYGRQYATAQEERYRSSVYDQNMEFIEAHNEQYTNGEVTYMLAINQFGDMTNEE 81

Query: 109 FRRQFLGLNRRLRLPA-DAQKAPILPTND--LPTDFDWRDHGAVTGVKDQGACGSCWSFS 165
                 GL     LPA +++   +L   D  LP + DWR  GAVT VKDQ ACGSCW+FS
Sbjct: 82  INAVMNGL-----LPASESRGVAVLGGRDDTLPAEVDWRTKGAVTPVKDQKACGSCWAFS 136

Query: 166 ATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGG 225
           ATG+LEG HFL  G+LVSLSEQ LVDC        +   D GC GGLM+ AF YI   GG
Sbjct: 137 ATGSLEGQHFLKDGKLVSLSEQNLVDC-------STKQGDHGCGGGLMDFAFTYIKDNGG 189

Query: 226 VEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSD-EDQMAANLVKHGPLAVGINA-- 282
           ++ E  YPY  TD G C+++ +   A V+ +  +  D ED +   +   GP++V I+A  
Sbjct: 190 IDTEASYPYEATD-GKCQYNPANSGATVTGYVDVEHDSEDALQKAVATIGPISVAIDASR 248

Query: 283 VWMQTYIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENG 341
                Y  GV     C    LDHGVL VGYG+            YW++KNSW   WG +G
Sbjct: 249 STFHFYHKGVYYDKECSSTSLDHGVLAVGYGTQ-------DGTDYWLVKNSWNITWGNHG 301

Query: 342 YYKICMGR-NVCGVDSMVS 359
           + ++   R N CG+ +  S
Sbjct: 302 FIEMSRNRNNNCGIATQAS 320


>gi|297794671|ref|XP_002865220.1| senescence-associated gene 12 [Arabidopsis lyrata subsp. lyrata]
 gi|297311055|gb|EFH41479.1| senescence-associated gene 12 [Arabidopsis lyrata subsp. lyrata]
          Length = 346

 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 118/314 (37%), Positives = 168/314 (53%), Gaps = 29/314 (9%)

Query: 43  EDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP--TAVHGVTK 100
           ++ L+  + H   + +K  + YA  +E   R+ VFK+N+ R +    +    T    V +
Sbjct: 29  DNELIMQKRHIE-WMTKHGRVYADVKEKSNRYVVFKSNVERIEHLNNIPAGRTFKLAVNQ 87

Query: 101 FSDLTPSEFRRQFLGLNRRLRLPADAQKAPI------LPTNDLPTDFDWRDHGAVTGVKD 154
           F+DLT  EFR  + G      L + +Q          + +  LP   DWR  GAVT +K+
Sbjct: 88  FADLTNDEFRSMYTGFKGVSSLSSQSQTKTTSFRYQNVSSGALPISVDWRTKGAVTPIKN 147

Query: 155 QGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMN 214
           QG+CG CW+FSA  A+EGA  +  G+L+SLSEQQLVDCD         + D GC GGLM+
Sbjct: 148 QGSCGCCWAFSAVAAIEGATQIKKGKLISLSEQQLVDCD---------TNDFGCEGGLMD 198

Query: 215 SAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSK-IAAAVSNFSVISSDEDQMAANLVKH 273
           +AFE+I+  GG+  E +YPY G D  +C   K+   A +++ +  +  +++Q     V H
Sbjct: 199 TAFEHIMATGGLTTESNYPYKGED-ATCNSKKTNPKATSITGYEDVPVNDEQALMKAVAH 257

Query: 274 GPLAVGIN--AVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKN 331
            P++VGI       Q Y  GV     C  YLDH V  +GYG S           YWIIKN
Sbjct: 258 QPVSVGIEGGGFDFQFYSSGVFTGE-CTTYLDHAVTAIGYGQST------NGSKYWIIKN 310

Query: 332 SWGENWGENGYYKI 345
           SWG  WGE+GY +I
Sbjct: 311 SWGTKWGESGYMRI 324


>gi|66823245|ref|XP_644977.1| cysteine proteinase 5 precursor [Dictyostelium discoideum AX4]
 gi|166201986|sp|P54640.2|CYSP5_DICDI RecName: Full=Cysteine proteinase 5; Flags: Precursor
 gi|60473097|gb|EAL71045.1| cysteine proteinase 5 precursor [Dictyostelium discoideum AX4]
          Length = 344

 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 125/346 (36%), Positives = 174/346 (50%), Gaps = 31/346 (8%)

Query: 30  MIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQL 89
           ++  V  +  + SE    NA   F+ +     K+Y T EE   R+ +FKAN+   ++   
Sbjct: 10  LLVSVATAKQQFSELQYRNA---FTDWMITHQKSY-TSEEFGARYNIFKANMDYVQQWNS 65

Query: 90  LDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAV 149
                V G+  F+D+T  E+R  +LG           Q+  +  T+   +  DWR  GAV
Sbjct: 66  KGSETVLGLNNFADITNEEYRNTYLGTKFDASSLIGTQEEKVFTTSSAASK-DWRSEGAV 124

Query: 150 TGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCN 209
           T VK+QG CG CWSFS TG+ EGAHF S GELVSLSEQ L+DC  E         +SGC+
Sbjct: 125 TPVKNQGQCGGCWSFSTTGSTEGAHFQSKGELVSLSEQNLIDCSTE---------NSGCD 175

Query: 210 GGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAAN 269
           GGLM  AFEYI+   G++ E  YPY   + G C++      A +S++  +++  +    +
Sbjct: 176 GGLMTYAFEYIINNNGIDTESSYPYKA-ENGKCEYKSENSGATLSSYKTVTAGSESSLES 234

Query: 270 LVKHGPLAVGINAVW--MQTYIGGVSC-PYICGKYLDHGVLIVGY------------GSS 314
            V   P++V I+A     Q Y  G+   P    + LDHGVL VGY            G S
Sbjct: 235 AVNVNPVSVAIDASHQSFQLYTSGIYYEPECSSENLDHGVLAVGYGSGSGSSSGQSSGQS 294

Query: 315 GFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVS 359
                      YWI+KNSWG +WG  GY  +   R N CG+ S  S
Sbjct: 295 SGNLSASSSNEYWIVKNSWGTSWGIEGYILMSRNRDNNCGIASSAS 340


>gi|449455625|ref|XP_004145553.1| PREDICTED: xylem cysteine proteinase 1-like [Cucumis sativus]
          Length = 351

 Score =  201 bits (511), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 127/321 (39%), Positives = 173/321 (53%), Gaps = 37/321 (11%)

Query: 53  FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ 112
           F  + S   K Y T EE  +RF VFK NL+          +   GV +F+DLT  EF+  
Sbjct: 48  FEEWISNHGKIYETIEEKWHRFEVFKDNLKHIDETNKKVTSYWLGVNEFADLTHQEFKNM 107

Query: 113 FLGL----NRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATG 168
           +LGL    +R  + P +     ++   DLP   DWR  GAVT VK+QG+CGSCW+FS   
Sbjct: 108 YLGLKVESSRTRQSPEEFTYKDVV---DLPKSVDWRKKGAVTRVKNQGSCGSCWAFSTVA 164

Query: 169 ALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVER 228
           A+EG + +  G L SLSEQ+L+DCD           ++GC+GGLM+ AF +I+ +GG+ +
Sbjct: 165 AVEGINKIVGGNLTSLSEQELIDCDR--------PYNNGCHGGLMDYAFSFIVSSGGLHK 216

Query: 229 EKDYPYTGTDGGSCKFDKSKI-AAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--M 285
           E+DYPY   +  +C   K ++    +S +  +  + +      + H PL+V I A     
Sbjct: 217 EEDYPYLEVE-STCDNKKGELEVVTISGYKDVPENNEASLIKALAHQPLSVAIEASGRDF 275

Query: 286 QTYIGGV-SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYK 344
           Q Y GGV   P  CG  LDHGV  VGYGSS       K   Y I+KNSWG  WGE GY  
Sbjct: 276 QFYSGGVFDGP--CGTQLDHGVTAVGYGSS-------KGVDYIIVKNSWGPKWGEKGY-- 324

Query: 345 ICMGRN------VCGVDSMVS 359
           I M RN      +CG++ M S
Sbjct: 325 IRMKRNTGKPAGLCGINKMAS 345


>gi|66377984|gb|AAY45869.1| cathepsin L-like cysteine proteinase [Globodera pallida]
          Length = 379

 Score =  201 bits (511), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 116/273 (42%), Positives = 155/273 (56%), Gaps = 26/273 (9%)

Query: 97  GVTKFSDLTPSEFR-----RQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTG 151
           G    +DL  SE++     R+ LG N  LR  A    API    DLP   DWRD G VT 
Sbjct: 119 GENHIADLPFSEYKKLNGYRRLLGDN--LRRNASTFLAPI-NIGDLPESVDWRDKGWVTE 175

Query: 152 VKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGG 211
           VK+QG CGSCW+FS+TGALE  H   TG+L+SLSEQ L+DC  +         + GCNGG
Sbjct: 176 VKNQGMCGSCWAFSSTGALEAQHARQTGQLISLSEQNLIDCSKKYG-------NMGCNGG 228

Query: 212 LMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANL 270
           +M++AF+YI    GV++E DYPY    G  C F ++ + A  +  F +   DE+++   +
Sbjct: 229 IMDNAFQYIKDNNGVDKELDYPYKAKTGKKCLFKRNDVGATDTGFFDIAEGDEEKLKIAV 288

Query: 271 VKHGPLAVGINA--VWMQTYIGGVSCPYICG-KYLDHGVLIVGYGSSGFAPIRFKEKPYW 327
              GP +V I+A     Q Y  GV     C  + LDHGVL+VGYG+        ++  YW
Sbjct: 289 ATQGPASVAIDAGHRSFQLYTHGVYFEKECSPENLDHGVLVVGYGTDA------QQGDYW 342

Query: 328 IIKNSWGENWGENGYYKICMGR-NVCGVDSMVS 359
           I+KNSWG +WGE GY ++   R N CG+ S  S
Sbjct: 343 IVKNSWGAHWGEQGYIRMARNRKNNCGIASHAS 375


>gi|222425026|dbj|BAH20463.1| cysteine protease [Spinacia oleracea]
          Length = 473

 Score =  201 bits (511), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 119/302 (39%), Positives = 165/302 (54%), Gaps = 30/302 (9%)

Query: 62  KTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH-GVTKFSDLTPSEFRRQFLG----- 115
           K Y    E + RF +FK NL    +    D      G+ KF+DLT  EFR  +LG     
Sbjct: 62  KNYNALGEKEKRFAIFKDNLEFIDQHNSDDSQTFKVGLNKFADLTNEEFRSVYLGRKKSS 121

Query: 116 ----LNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALE 171
               L    +    + +      ++LP   DWR +GAV  VKDQG CGSCW+FS   A+E
Sbjct: 122 SSSPLLSSAKSKVKSDRYLFKEGDELPEAVDWRKNGAVAKVKDQGQCGSCWAFSTIAAVE 181

Query: 172 GAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKD 231
           G + + TGEL+SLSEQ+LVDCD         S +SGC+GGLM+ A+E+I+  GG++ + D
Sbjct: 182 GINQIVTGELLSLSEQELVDCD--------TSYNSGCDGGLMDYAYEFIINNGGIDTDAD 233

Query: 232 YPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTYI 289
           YPYT  DG   ++ K+     + +F  +  ++++     V H P++V I A     Q Y 
Sbjct: 234 YPYTAKDGKCDQYRKNAKVVTIDDFEDVPENDEKALQKAVAHQPVSVAIEAGGSTFQFYQ 293

Query: 290 GGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR 349
            GV     CG  LDHGV+ VGYGS          K YWI++NSWG +WGE+GY +  M R
Sbjct: 294 SGVFTG-KCGADLDHGVVAVGYGSD-------DGKDYWIVRNSWGADWGESGYIR--MER 343

Query: 350 NV 351
           N+
Sbjct: 344 NL 345


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.318    0.134    0.412 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,032,940,503
Number of Sequences: 23463169
Number of extensions: 261856853
Number of successful extensions: 598755
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6604
Number of HSP's successfully gapped in prelim test: 836
Number of HSP's that attempted gapping in prelim test: 569410
Number of HSP's gapped (non-prelim): 8929
length of query: 369
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 225
effective length of database: 8,980,499,031
effective search space: 2020612281975
effective search space used: 2020612281975
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 77 (34.3 bits)