Query 017548
Match_columns 369
No_of_seqs 327 out of 1930
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 16:12:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017548.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017548hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qj3_A Cathepsin L-like protei 100.0 2.7E-84 9.3E-89 613.1 28.9 298 48-362 17-330 (331)
2 3qt4_A Cathepsin-L-like midgut 100.0 1.7E-83 5.9E-88 606.2 26.5 299 46-362 20-328 (329)
3 1by8_A Protein (procathepsin K 100.0 1.1E-82 3.7E-87 599.0 27.2 297 49-362 7-313 (314)
4 2c0y_A Procathepsin S; proenzy 100.0 1.3E-82 4.3E-87 598.8 26.1 298 49-362 8-314 (315)
5 3tnx_A Papain; hydrolase, cyto 100.0 3.6E-81 1.2E-85 594.7 32.3 291 48-362 61-361 (363)
6 1cs8_A Human procathepsin L; p 100.0 6.8E-82 2.3E-86 594.1 27.0 300 49-362 8-315 (316)
7 2o6x_A Procathepsin L1, secret 100.0 6.7E-82 2.3E-86 592.6 26.7 297 50-364 2-307 (310)
8 1pci_A Procaricain; zymogen, h 100.0 8.5E-81 2.9E-85 587.6 30.1 295 48-362 17-320 (322)
9 1xkg_A DER P I, major mite fec 100.0 8.7E-79 3E-83 570.6 23.8 287 52-366 7-305 (312)
10 3pdf_A Cathepsin C, dipeptidyl 100.0 3.8E-73 1.3E-77 553.1 23.0 283 68-366 135-438 (441)
11 3hhi_A Cathepsin B-like cystei 100.0 4.3E-72 1.5E-76 528.5 17.7 278 72-368 3-317 (325)
12 3pbh_A Procathepsin B; thiol p 100.0 8.7E-68 3E-72 498.2 19.1 266 80-365 11-316 (317)
13 1m6d_A Cathepsin F, catsf; pap 100.0 2E-66 6.7E-71 464.3 19.9 210 137-363 1-213 (214)
14 3i06_A Cruzipain; autocatalyti 100.0 1.2E-65 4.2E-70 459.5 23.7 209 137-363 1-214 (215)
15 3kwz_A Cathepsin K; enzyme inh 100.0 8E-66 2.7E-70 461.2 21.3 209 137-362 1-214 (215)
16 8pch_A Cathepsin H; hydrolase, 100.0 7.2E-66 2.5E-70 463.0 19.3 213 137-364 1-219 (220)
17 3ovx_A Cathepsin S; hydrolase, 100.0 1.2E-65 4E-70 461.0 19.9 212 137-362 2-217 (218)
18 2xu3_A Cathepsin L1; hydrolase 100.0 3.3E-65 1.1E-69 458.5 22.6 215 137-362 1-219 (220)
19 1cqd_A Protein (protease II); 100.0 1.6E-64 5.4E-69 454.0 21.5 209 136-363 2-217 (221)
20 2b1m_A SPE31; papain-like, sug 100.0 2.5E-64 8.5E-69 459.2 21.6 211 136-363 1-224 (246)
21 1iwd_A Ervatamin B; cysteine p 100.0 3.6E-64 1.2E-68 449.6 21.9 206 137-362 1-213 (215)
22 3u8e_A Papain-like cysteine pr 100.0 1.7E-64 5.9E-69 454.2 19.1 208 137-362 1-218 (222)
23 3f5v_A DER P 1 allergen; aller 100.0 2.1E-64 7.2E-69 454.0 19.2 208 135-362 8-221 (222)
24 3p5u_A Actinidin; SAD, cystein 100.0 3.7E-64 1.3E-68 451.6 20.1 210 137-363 1-217 (220)
25 1ppo_A Protease omega; hydrola 100.0 6.3E-64 2.2E-68 448.5 21.2 206 137-362 1-214 (216)
26 1yal_A Chymopapain; hydrolase, 100.0 1.3E-63 4.5E-68 447.1 21.0 207 137-363 1-215 (218)
27 2oul_A Falcipain 2; cysteine p 100.0 1.3E-63 4.4E-68 453.6 20.5 214 135-362 16-239 (241)
28 3ioq_A CMS1MS2; caricaceae, cy 100.0 2.6E-63 8.9E-68 443.8 20.8 204 137-363 1-211 (213)
29 3bwk_A Cysteine protease falci 100.0 1.8E-63 6.1E-68 453.2 19.7 214 135-362 18-241 (243)
30 1s4v_A Cysteine endopeptidase; 100.0 4.2E-63 1.5E-67 446.9 21.6 212 136-364 1-220 (229)
31 1o0e_A Ervatamin C; plant cyst 100.0 7.4E-63 2.5E-67 438.9 22.4 201 137-362 1-206 (208)
32 2cio_A Papain; hydrolase/inhib 100.0 1.1E-62 3.7E-67 439.3 22.9 202 137-362 1-210 (212)
33 3f75_A Toxopain-2, cathepsin L 100.0 1.3E-63 4.5E-68 449.6 16.9 213 135-362 5-223 (224)
34 2fo5_A Cysteine proteinase EP- 100.0 4E-63 1.4E-67 453.8 19.7 212 135-363 2-224 (262)
35 2bdz_A Mexicain; cysteine prot 100.0 1.7E-62 5.7E-67 438.5 22.9 203 137-363 1-211 (214)
36 3qsd_A Cathepsin B-like peptid 100.0 1.9E-61 6.7E-66 443.0 18.6 211 136-363 2-253 (254)
37 3cbj_A Cathepsin B; cathepsin 100.0 1.7E-61 5.9E-66 446.1 17.8 216 135-367 5-261 (266)
38 1deu_A Procathepsin X; cystein 100.0 1.1E-60 3.7E-65 442.3 20.0 211 134-364 33-276 (277)
39 2wbf_X Serine-repeat antigen p 100.0 2.8E-56 9.6E-61 411.7 20.6 217 139-366 9-261 (265)
40 3ois_A Cysteine protease; alph 100.0 2.1E-53 7.2E-58 396.9 12.8 236 93-348 13-272 (291)
41 2cb5_A Protein (bleomycin hydr 100.0 1.1E-42 3.9E-47 336.4 13.9 216 137-363 48-423 (453)
42 2e01_A Cysteine proteinase 1; 100.0 1.6E-41 5.6E-46 328.6 18.2 214 137-363 53-424 (457)
43 3pw3_A Aminopeptidase C; bleom 100.0 1.6E-35 5.4E-40 280.8 18.0 194 148-348 21-356 (383)
44 3f75_P Toxopain-2, cathepsin L 99.7 3.9E-18 1.3E-22 132.9 8.9 78 41-118 13-90 (106)
45 2l95_A Crammer, LP06209P; cyst 99.7 3.9E-17 1.3E-21 121.7 7.0 68 49-118 6-77 (80)
46 1pxv_A Cysteine protease; hydr 97.5 0.0026 8.9E-08 52.8 13.2 131 154-350 26-164 (183)
47 1cv8_A Staphopain; cysteine pr 97.4 0.005 1.7E-07 50.9 13.6 129 154-348 17-153 (174)
48 1x9y_A Cysteine proteinase; ha 97.2 0.0062 2.1E-07 55.9 13.2 132 153-350 201-340 (367)
49 4d8b_A Streptopain; papain fol 83.4 1.3 4.5E-05 39.5 5.0 54 263-347 171-226 (261)
50 3erv_A Putative C39-like pepti 83.2 2.8 9.4E-05 36.8 7.0 49 262-314 131-188 (236)
51 1dki_A Pyrogenic exotoxin B zy 67.3 13 0.00045 34.7 7.4 54 263-347 289-344 (371)
52 3bb7_A Interpain A; cysteine p 66.0 13 0.00045 34.0 6.9 60 264-347 239-298 (321)
53 2r9f_A Calpain-1 catalytic sub 37.3 65 0.0022 29.5 6.6 68 264-346 211-312 (339)
54 2nqa_A Calpain 8; calpain, cal 34.8 68 0.0023 29.2 6.3 68 264-346 206-307 (326)
55 1jb0_F Photosystem 1 reaction 33.0 27 0.00091 28.3 2.7 26 52-77 36-61 (164)
56 1ziv_A Calpain 9; cysteine pro 28.1 1.1E+02 0.0039 27.9 6.6 69 264-346 210-312 (339)
57 3bx4_B Aggretin beta chain; to 26.6 14 0.00047 28.9 0.0 19 1-19 1-19 (146)
58 1co7_I BPTI, bovine pancreatic 25.0 15 0.00052 27.3 0.0 16 1-16 2-17 (99)
59 3bow_A Calpain-2 catalytic sub 21.9 1.4E+02 0.0046 30.4 6.4 68 264-346 226-327 (714)
60 1th5_A NIFU1; iron-sulfur clus 21.1 33 0.0011 24.0 1.1 26 149-176 37-62 (74)
No 1
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} SCOP: d.3.1.0
Probab=100.00 E-value=2.7e-84 Score=613.13 Aligned_cols=298 Identities=37% Similarity=0.738 Sum_probs=265.9
Q ss_pred cHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHhcCC----CCCeeeeeccCCCCChHHHHhhhcCCccCCCCC
Q 017548 48 NAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLL----DPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLP 123 (369)
Q Consensus 48 ~~~~~f~~f~~~~~k~Y~~~~e~~~R~~iF~~N~~~I~~~N~~----~~s~~~giN~FaDlt~~Ef~~~~~~~~~~~~~~ 123 (369)
..+.+|++|+++|+|+|.+.+|+.+|+.||++|+++|++||++ +.+|++|+|+|+|||.+||++.+++.+.+....
T Consensus 17 ~l~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlt~eEf~~~~~~~~~~~~~~ 96 (331)
T 3qj3_A 17 FVAEKWENFKTTYARSYVNAKEETFRKQIFQKKLETFEEHNEKYRQGLVSYTLGVNLFTDMTPEEMKAYTHGLIMPADLH 96 (331)
T ss_dssp HHHHHHHHHHHHTTCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSEEECCSTTTTCCHHHHHHHHSCCCCCSSTT
T ss_pred HHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCceeecccccccCCHHHHHHHhcccccccccc
Confidence 4567899999999999999899999999999999999999975 579999999999999999999988765421110
Q ss_pred CCCC--CCC----CCCCCCCCCceeccCCCCCCcccCCCCCccHHHHHhhhHHHHHHhhhcCC--ccccChhHhhhcCCC
Q 017548 124 ADAQ--KAP----ILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGE--LVSLSEQQLVDCDHE 195 (369)
Q Consensus 124 ~~~~--~~~----~~~~~~lP~~~Dwr~~g~v~pV~dQg~cgsCwAfa~~~~le~~~~~~~~~--~~~lS~q~l~dc~~~ 195 (369)
.... ..+ .....+||++||||++|+|+||||||.||||||||++++||+++++++++ .++||+|+|+||+..
T Consensus 97 ~~~~~~~~~~~~~~~~~~~lP~s~DwR~~g~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~~~LSeQ~LvdC~~~ 176 (331)
T 3qj3_A 97 KNGIPIKTREDLGLNASVRYPASFDWRDQGMVSPVKNQGSCGSSWAFSSTGAIESQMKIANGAGYDSSVSEQQLVDCVPN 176 (331)
T ss_dssp TTCEEECSGGGGTCCSSCCCCSSEEGGGGTCSCCCCBCCSSCCHHHHHHHHHHHHHHHHHHCTTSCCCBCHHHHHHHCTT
T ss_pred ccCcccccccccccccccCCCcceecccCCccCCCccCcccchhhHHHHHHHHHHHHHHHhCCCcccCcCHHHHhhhccC
Confidence 0000 000 00224799999999999999999999999999999999999999999998 899999999999974
Q ss_pred CCCCCCCCCCCCCCCCChHHHHHHHHHcCCcCCCCCcccCCCCCCCccCCCCCceEEeeeeEecCc-hHHHHHHHHHhcC
Q 017548 196 CDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISS-DEDQMAANLVKHG 274 (369)
Q Consensus 196 ~~~~~~~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPy~~~~~~~c~~~~~~~~~~i~~~~~~~~-~~~~ik~~l~~~g 274 (369)
+.||+||++..|++|+.+++||++|++|||.+.+ +.|+.......+++++|..++. ++++||++|+++|
T Consensus 177 ---------~~GC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~-~~C~~~~~~~~~~i~~~~~v~~~~e~~lk~al~~~G 246 (331)
T 3qj3_A 177 ---------ALGCSGGWMNDAFTYVAQNGGIDSEGAYPYEMAD-GNCHYDPNQVAARLSGYVYLSGPDENMLADMVATKG 246 (331)
T ss_dssp ---------SCGGGCCCHHHHHHHHHHHTCEEBTTTSCCCSSC-CCCCCCTTSEEECCSEEEEESSCCHHHHHHHHHHHC
T ss_pred ---------CCCCCCCCHHHHHHHHHHcCCcCcccccCccCCC-CCCCCCcccceeEeeEEEEeCCCCHHHHHHHHHhCC
Confidence 7899999999999999998899999999999988 8999888888889999999986 8999999999999
Q ss_pred CeEEEEEccc-ccccCCCeeecCCCCC-cCCeEEEEEEecccCCcCCcCCCCCEEEEEcCCCCCCCCCcEEEEEeCC-Ce
Q 017548 275 PLAVGINAVW-MQTYIGGVSCPYICGK-YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NV 351 (369)
Q Consensus 275 PV~v~~~~~~-f~~y~~Gi~~~~~~~~-~~~Hav~iVGyg~~~~~~~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~~-n~ 351 (369)
||+|+|++.. |++|++|||..+.|+. .++|||+|||||++ +|++|||||||||++|||+|||||+|+. |.
T Consensus 247 PV~v~i~a~~~f~~Y~~Gvy~~~~c~~~~~~HaV~iVGyg~~-------~g~~yWivkNSWG~~WGe~GY~~i~r~~~n~ 319 (331)
T 3qj3_A 247 PVAVAFDADDPFGSYSGGVYYNPTCETNKFTHAVLIVGYGNE-------NGQDYWLVKNSWGDGWGLDGYFKIARNANNH 319 (331)
T ss_dssp CEEEEECCCTTGGGEEEEEECCTTCCSSCCCEEEEEEEEEEE-------TTEEEEEEECSBCTTSTBTTEEEEECSSSSG
T ss_pred CEEEEEEcccccccccCceEeCCCCCCCcCCEEEEEEEEecc-------CCceEEEEEcCCCCCcCCCCEEEEEcCCCCc
Confidence 9999999877 9999999999888974 59999999999987 6899999999999999999999999998 99
Q ss_pred eccccceeeEE
Q 017548 352 CGVDSMVSSVA 362 (369)
Q Consensus 352 cgi~~~~~~~~ 362 (369)
|||++.++.+.
T Consensus 320 CgI~~~~~~p~ 330 (331)
T 3qj3_A 320 CGIAGVASVPT 330 (331)
T ss_dssp GGTTTSCEEEE
T ss_pred cCcCCceeeee
Confidence 99999999875
No 2
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor}
Probab=100.00 E-value=1.7e-83 Score=606.15 Aligned_cols=299 Identities=37% Similarity=0.697 Sum_probs=262.7
Q ss_pred hhcHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHhcCC----CCCeeeeeccCCCCChHHHHhhhcCCccCCC
Q 017548 46 LLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLL----DPTAVHGVTKFSDLTPSEFRRQFLGLNRRLR 121 (369)
Q Consensus 46 ~~~~~~~f~~f~~~~~k~Y~~~~e~~~R~~iF~~N~~~I~~~N~~----~~s~~~giN~FaDlt~~Ef~~~~~~~~~~~~ 121 (369)
....+.+|++|+++|+|+|.+.+|+.+|+.||++|+++|++||++ +.+|++|+|+|+|||.+||++ +++.++...
T Consensus 20 ~~~~~~~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlt~eEf~~-~~g~~~~~~ 98 (329)
T 3qt4_A 20 KSLFQEQWSQFKLTHKKSYSSPIEEIRRQLIFKDNVAKIAEHNAKFEKGEVTYSKAMNQFGDMSKEEFLA-YVNRGKAQK 98 (329)
T ss_dssp CCHHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSEEECCCGGGGCCHHHHHH-HHHHTCCC-
T ss_pred HHHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCeEEeccccccCCHHHHHH-hcCCccccc
Confidence 346778999999999999999889999999999999999999974 579999999999999999999 776553211
Q ss_pred CCCC--CCCCCCCCCCCCCCceeccCCCCCCcccCCCCCccHHHHHhhhHHHHHHhhhcCCccccChhHhhhcCCCCCCC
Q 017548 122 LPAD--AQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPE 199 (369)
Q Consensus 122 ~~~~--~~~~~~~~~~~lP~~~Dwr~~g~v~pV~dQg~cgsCwAfa~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~~ 199 (369)
.... .......+..+||++||||++ +|+||||||.||||||||++++||+++++++++.++||+|+|+||+..
T Consensus 99 ~~~~~~~~~~~~~~~~~lP~~~DwR~~-~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~LSeQ~LvdC~~~---- 173 (329)
T 3qt4_A 99 PKHPENLRMPYVSSKKPLAASVDWRSN-AVSEVKDQGQCGSSWSFSTTGAVEGQLALQRGRLTSLSEQNLIDCSSS---- 173 (329)
T ss_dssp -----CCEEECCCCCSCCCSCEECTTT-SCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGG----
T ss_pred ccccccccccccCCccCCCCCEEcccc-ccCCCccCCCCcChHHHHHHHHHHHHHHHHcCCcccCCHHHHHHhccc----
Confidence 0000 000000112479999999999 999999999999999999999999999999999999999999999864
Q ss_pred CCCCCCCCCCCCChHHHHHHHHHcCCcCCCCCcccCCCCCCCccCCCCCceEEeeeeEecCc-hHHHHHHHHHhcCCeEE
Q 017548 200 ESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISS-DEDQMAANLVKHGPLAV 278 (369)
Q Consensus 200 ~~~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPy~~~~~~~c~~~~~~~~~~i~~~~~~~~-~~~~ik~~l~~~gPV~v 278 (369)
..+.||+||++..|++|+.++ ||++|++|||.+.+ +.|+.......+++++|..++. ++++||++|+++|||+|
T Consensus 174 ---~g~~GC~GG~~~~a~~yi~~~-Gi~~e~~yPY~~~~-~~C~~~~~~~~~~i~~~~~v~~~~e~~lk~al~~~GPV~v 248 (329)
T 3qt4_A 174 ---YGNAGCDGGWMDSAFSYIHDY-GIMSESAYPYEAQG-DYCRFDSSQSVTTLSGYYDLPSGDENSLADAVGQAGPVAV 248 (329)
T ss_dssp ---GTCCTTBCCCHHHHHHHHHHS-CBCBTTTSCCCSSC-CCCCCCGGGCCBCCSEEEECCTTCHHHHHHHHHHTCCEEE
T ss_pred ---cCCCCCCCCChhHHHHHHHHc-CCCcHHHeeeecCC-CCCCCCcccceEEeceEEEecCCCHHHHHHHHHhCCCEEE
Confidence 137899999999999999998 99999999999988 8999887777788999999986 79999999999999999
Q ss_pred EEEccc-ccccCCCeeecCCCCC-cCCeEEEEEEecccCCcCCcCCCCCEEEEEcCCCCCCCCCcEEEEEeCC-Ceeccc
Q 017548 279 GINAVW-MQTYIGGVSCPYICGK-YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVD 355 (369)
Q Consensus 279 ~~~~~~-f~~y~~Gi~~~~~~~~-~~~Hav~iVGyg~~~~~~~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~~-n~cgi~ 355 (369)
+|++.. |++|++|||..+.|+. .++|||+|||||++ ++++|||||||||++||++|||||+|+. |.|||+
T Consensus 249 ~i~a~~~f~~Y~~GVy~~~~c~~~~~~HaV~iVGyg~~-------~g~~yWivkNSWG~~WGe~GY~~i~r~~~n~CgI~ 321 (329)
T 3qt4_A 249 AIDATDELQFYSGGLFYDQTCNQSDLNHGVLVVGYGSD-------NGQDYWILKNSWGSGWGESGYWRQVRNYGNNCGIA 321 (329)
T ss_dssp EECCCGGGTTEEEEEECCSSCCSSCCCEEEEEEEEEEE-------TTEEEEEEECSBCTTSTBTTEEEEESSSSSGGGTT
T ss_pred EEecChhhhhccCceeecCCCCCCcCCEEEEEEEEEee-------CCccEEEEEeCCCCcccCCcEEEEEeCCCCccCCC
Confidence 999985 9999999999888974 59999999999987 6899999999999999999999999998 999999
Q ss_pred cceeeEE
Q 017548 356 SMVSSVA 362 (369)
Q Consensus 356 ~~~~~~~ 362 (369)
+.++.+.
T Consensus 322 ~~~~yp~ 328 (329)
T 3qt4_A 322 TAASYPA 328 (329)
T ss_dssp TTCEEEE
T ss_pred CceeEee
Confidence 9999875
No 3
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A
Probab=100.00 E-value=1.1e-82 Score=598.96 Aligned_cols=297 Identities=36% Similarity=0.663 Sum_probs=260.2
Q ss_pred HHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHhcCC----CCCeeeeeccCCCCChHHHHhhhcCCccCCCCCC
Q 017548 49 AEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLL----DPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPA 124 (369)
Q Consensus 49 ~~~~f~~f~~~~~k~Y~~~~e~~~R~~iF~~N~~~I~~~N~~----~~s~~~giN~FaDlt~~Ef~~~~~~~~~~~~~~~ 124 (369)
.+.+|++|+++|+|+|.+.+|+.+|+.+|++|+++|++||+. ..+|++|+|+|+|||.+||++.+++.++......
T Consensus 7 ~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~~~~~g~N~FaDlt~eEf~~~~~g~~~~~~~~~ 86 (314)
T 1by8_A 7 LDTHWELWKKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPLSHSR 86 (314)
T ss_dssp HHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCSEEECCCTTSSSCHHHHHHHSCCCCCCSCCCC
T ss_pred HHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCcceEEcccccccCCHHHHHHHhccCCCCccccc
Confidence 456899999999999998899999999999999999999974 3689999999999999999988887654221100
Q ss_pred CCCCCCCCCCCC-CCCceeccCCCCCCcccCCCCCccHHHHHhhhHHHHHHhhhcCCccccChhHhhhcCCCCCCCCCCC
Q 017548 125 DAQKAPILPTND-LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGS 203 (369)
Q Consensus 125 ~~~~~~~~~~~~-lP~~~Dwr~~g~v~pV~dQg~cgsCwAfa~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~~~~~~ 203 (369)
...........+ ||++||||++|+|+||||||.||||||||++++||+++++++|+.++||+|+|+||+.
T Consensus 87 ~~~~~~~~~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFs~~~alE~~~~i~~g~~~~LSeq~lvdC~~--------- 157 (314)
T 1by8_A 87 SNDTLYIPEWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVS--------- 157 (314)
T ss_dssp SSSSSBCCCCSSCCCSCCBSTTTTCSCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHTTCT---------
T ss_pred CCccccccccccCCCCeEeCCCCCCCCCcccCCCCCCcHHHHHHHHHHHHHHHhcCCCcccCHHHHHHhcC---------
Confidence 000111111223 9999999999999999999999999999999999999999999999999999999985
Q ss_pred CCCCCCCCChHHHHHHHHHcCCcCCCCCcccCCCCCCCccCCCCCceEEeeeeEecCc-hHHHHHHHHHhcCCeEEEEEc
Q 017548 204 CDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISS-DEDQMAANLVKHGPLAVGINA 282 (369)
Q Consensus 204 ~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPy~~~~~~~c~~~~~~~~~~i~~~~~~~~-~~~~ik~~l~~~gPV~v~~~~ 282 (369)
++.||+||++..|++|+.+++||++|++|||.+.+ +.|+..+....+++++|..++. ++++||++|+++|||+|+|++
T Consensus 158 ~~~gC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~-~~C~~~~~~~~~~i~~~~~v~~~~~~~i~~al~~~GPV~v~i~~ 236 (314)
T 1by8_A 158 ENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQE-ESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDA 236 (314)
T ss_dssp TSCGGGCCCSHHHHHHHHHTTCBCBTTTSCCCSSC-CCCCCCGGGCCBCCSCEEECCSSCHHHHHHHHHHHCCEEEEECC
T ss_pred CCCCCcCCCHHHHHHHHHHcCCcCcHhhCCCCCCC-CCcCCCCccceeEECcEEEecCCCHHHHHHHHHHcCCEEEEEEe
Confidence 27899999999999999877799999999999988 8998776656678899998875 899999999999999999999
Q ss_pred c--cccccCCCeeecCCCCC-cCCeEEEEEEecccCCcCCcCCCCCEEEEEcCCCCCCCCCcEEEEEeCC-Ceeccccce
Q 017548 283 V--WMQTYIGGVSCPYICGK-YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMV 358 (369)
Q Consensus 283 ~--~f~~y~~Gi~~~~~~~~-~~~Hav~iVGyg~~~~~~~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~~-n~cgi~~~~ 358 (369)
. .|++|++|||..+.|+. .++|||+|||||++ +|++|||||||||++|||+|||||+|+. |.|||++.+
T Consensus 237 ~~~~f~~Y~~Gvy~~~~c~~~~~~HaV~iVGyg~~-------~g~~yWivkNSWG~~WGe~GY~~i~r~~~n~CgI~~~~ 309 (314)
T 1by8_A 237 SLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQ-------KGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLA 309 (314)
T ss_dssp CSHHHHTEEEECBCCTTCCSSCCCEEEEEEEEEEE-------TTEEEEEEECSBTTTSTBTTEEEECCSSSCGGGTTSSC
T ss_pred ChHHhhhccCceecCCCCCCCCCCeEEEEEEEecc-------CCceEEEEEcCCCCCcCcCCEEEEEcCCCCcCCccCee
Confidence 7 39999999998877986 59999999999987 6899999999999999999999999995 899999999
Q ss_pred eeEE
Q 017548 359 SSVA 362 (369)
Q Consensus 359 ~~~~ 362 (369)
+.+.
T Consensus 310 ~~p~ 313 (314)
T 1by8_A 310 SFPK 313 (314)
T ss_dssp EEEC
T ss_pred EEee
Confidence 8864
No 4
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens}
Probab=100.00 E-value=1.3e-82 Score=598.78 Aligned_cols=298 Identities=37% Similarity=0.697 Sum_probs=260.3
Q ss_pred HHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHhcCC----CCCeeeeeccCCCCChHHHHhhhcCCccCCCCCC
Q 017548 49 AEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLL----DPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPA 124 (369)
Q Consensus 49 ~~~~f~~f~~~~~k~Y~~~~e~~~R~~iF~~N~~~I~~~N~~----~~s~~~giN~FaDlt~~Ef~~~~~~~~~~~~~~~ 124 (369)
.+.+|++|+++|+|+|.+.+|+.+|+.+|++|+++|++||+. ..+|++|+|+|+|||.+||++.+++.++.....
T Consensus 8 ~~~~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~s~~~g~N~FaDlt~eEf~~~~~g~~~~~~~~- 86 (315)
T 2c0y_A 8 LDHHWHLWKKTYGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVMSLMSSLRVPSQWQ- 86 (315)
T ss_dssp GHHHHHHHHHHHTCCCCSTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCCGGGGCCHHHHHHHTTSBCCCCGGG-
T ss_pred HHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCcceEeccCccccCCHHHHHHHhcCCCCCcccc-
Confidence 456899999999999988889999999999999999999964 368999999999999999998888765421110
Q ss_pred CCCCCCCCCCCCCCCceeccCCCCCCcccCCCCCccHHHHHhhhHHHHHHhhhcCCccccChhHhhhcC-CCCCCCCCCC
Q 017548 125 DAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCD-HECDPEESGS 203 (369)
Q Consensus 125 ~~~~~~~~~~~~lP~~~Dwr~~g~v~pV~dQg~cgsCwAfa~~~~le~~~~~~~~~~~~lS~q~l~dc~-~~~~~~~~~~ 203 (369)
...........+||++||||++|+|+||||||.||||||||++++||+++++++|+.++||+|+|+||+ .. .
T Consensus 87 ~~~~~~~~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAfs~~~alE~~~~i~~g~~~~LSeq~lvdC~~~~-------~ 159 (315)
T 2c0y_A 87 RNITYKSNPNRILPDSVDWREKGCVTEVKYQGSCGAAWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEK-------Y 159 (315)
T ss_dssp SCBCC------CCCSCEETTTTTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHSCGG-------G
T ss_pred CCccccCcccCCCCCeEecCCCCCcCCCcCcccCCCcHHHHHHHHHHHHHHHHhCCCcCcCHHHHHhhcccc-------c
Confidence 000000011236999999999999999999999999999999999999999999999999999999998 32 1
Q ss_pred CCCCCCCCChHHHHHHHHHcCCcCCCCCcccCCCCCCCccCCCCCceEEeeeeEecCc-hHHHHHHHHHhcCCeEEEEEc
Q 017548 204 CDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISS-DEDQMAANLVKHGPLAVGINA 282 (369)
Q Consensus 204 ~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPy~~~~~~~c~~~~~~~~~~i~~~~~~~~-~~~~ik~~l~~~gPV~v~~~~ 282 (369)
++.||+||++..|++|+.+++||++|++|||.+.+ +.|+..+....+++++|..++. ++++||++|+++|||+|+|++
T Consensus 160 ~~~gC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~-~~C~~~~~~~~~~i~~~~~v~~~~~~~i~~al~~~GPV~v~i~~ 238 (315)
T 2c0y_A 160 GNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMD-QKCQYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDA 238 (315)
T ss_dssp TCCGGGCBCHHHHHHHHHHHTCEEBTTTSCCCSSC-CCCCCCGGGEEECCCEEEECCTTCHHHHHHHHHHTCCEEEEECC
T ss_pred CCCCCCCCCHHHHHHHHHHhCCcCchhcCCCccCC-CCcccCCcccccccCCeEEeCCCCHHHHHHHHHHcCCEEEEEec
Confidence 37899999999999999876799999999999988 8999876666788899998875 799999999999999999999
Q ss_pred c-c-ccccCCCeeecCCCCCcCCeEEEEEEecccCCcCCcCCCCCEEEEEcCCCCCCCCCcEEEEEeCC-Ceecccccee
Q 017548 283 V-W-MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVS 359 (369)
Q Consensus 283 ~-~-f~~y~~Gi~~~~~~~~~~~Hav~iVGyg~~~~~~~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~~-n~cgi~~~~~ 359 (369)
. . |++|++|||..+.|+..++|||+|||||++ +|++|||||||||++||++|||||+|+. |.|||++.++
T Consensus 239 ~~~~f~~Y~~Gvy~~~~c~~~~~HaV~iVGyg~~-------~g~~yWivkNSWG~~WGe~GY~~i~r~~~n~CgI~~~~~ 311 (315)
T 2c0y_A 239 RHPSFFLYRSGVYYEPSCTQNVNHGVLVVGYGDL-------NGKEYWLVKNSWGHNFGEEGYIRMARNKGNHCGIASFPS 311 (315)
T ss_dssp CSHHHHTEEEEEECCTTCCSCCCEEEEEEEEEEE-------TTEEEEEEECSBCTTSTBTTEEEEECSSSSGGGTTTSCE
T ss_pred CchhhhccCCCcccCCCCCCcCCEEEEEEEEeec-------CCCcEEEEEcCCCCCcCCCcEEEEEcCCCCccCcCceeE
Confidence 7 3 999999999887798889999999999987 6899999999999999999999999995 9999999998
Q ss_pred eEE
Q 017548 360 SVA 362 (369)
Q Consensus 360 ~~~ 362 (369)
.+.
T Consensus 312 ~p~ 314 (315)
T 2c0y_A 312 YPE 314 (315)
T ss_dssp EEE
T ss_pred Eee
Confidence 775
No 5
>3tnx_A Papain; hydrolase, cytoplasm for recombinant expression; 2.62A {Carica papaya}
Probab=100.00 E-value=3.6e-81 Score=594.74 Aligned_cols=291 Identities=34% Similarity=0.621 Sum_probs=248.0
Q ss_pred cHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeeeccCCCCChHHHHhhhcCCccCCCCCCCCC
Q 017548 48 NAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQ 127 (369)
Q Consensus 48 ~~~~~f~~f~~~~~k~Y~~~~e~~~R~~iF~~N~~~I~~~N~~~~s~~~giN~FaDlt~~Ef~~~~~~~~~~~~~~~~~~ 127 (369)
...+.|++|+++|+|+|.+.+|+.+|+.||++|+++|++||+.+.+|++|+|+|+|||.+||++++++..+.........
T Consensus 61 ~~~~lf~~f~~~~~K~Y~~~~E~~~R~~iF~~Nl~~I~~~N~~~~sy~~g~N~FaDlT~eEf~~~~~~~~~~~~~~~~~~ 140 (363)
T 3tnx_A 61 RLIQLFESWMLKHNKIYKNIDEKIYRFEIFKDNLKYIDETNKKNNSYWLGLNVFADMSNDEFKEKYTGSIAGNYTTTELS 140 (363)
T ss_dssp HHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHTTSCCSEEECSCTTTTSCHHHHHHHHSCSSCSCCCCSSSS
T ss_pred HHHHHHHHHHHHcCCcCCCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEeccccccCCHHHHHHHhcccccccccccccc
Confidence 44568999999999999999999999999999999999999999999999999999999999999988654322111111
Q ss_pred CCC--CCCCCCCCCceeccCCCCCCcccCCCCCccHHHHHhhhHHHHHHhhhcCCccccChhHhhhcCCCCCCCCCCCCC
Q 017548 128 KAP--ILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCD 205 (369)
Q Consensus 128 ~~~--~~~~~~lP~~~Dwr~~g~v~pV~dQg~cgsCwAfa~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~~~~~~~~ 205 (369)
... .....+||++||||++|+|+||||||.||||||||+++++|+++++++|+.+.||+|+|+||+.. +
T Consensus 141 ~~~~~~~~~~~lP~s~DWR~~g~VtpVkdQG~CGSCWAFsa~~alE~~~~i~tg~~~~LSeQ~LvdC~~~---------~ 211 (363)
T 3tnx_A 141 YEEVLNDGDVNIPEYVDWRQKGAVTPVKNQGSCGSAWAFSAVSTIESIIKIRTGNLNEYSEQELLDCDRR---------S 211 (363)
T ss_dssp SSCCCCCSCCCCCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTT---------S
T ss_pred cccccCcccCCCCcceecccCCCCCCCccCCcCCchhhhhhcccHHHHHHHHcCCCCCcCHHHHhcccCC---------C
Confidence 111 12235799999999999999999999999999999999999999999999999999999999874 7
Q ss_pred CCCCCCChHHHHHHHHHcCCcCCCCCcccCCCCCCCccC-CCCCceEEeeeeEecCch-HHHHHHHHHhcCCeEEEEEcc
Q 017548 206 SGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKF-DKSKIAAAVSNFSVISSD-EDQMAANLVKHGPLAVGINAV 283 (369)
Q Consensus 206 ~gC~GG~~~~a~~~~~~~~Gi~~e~~yPy~~~~~~~c~~-~~~~~~~~i~~~~~~~~~-~~~ik~~l~~~gPV~v~~~~~ 283 (369)
.||+||.+..|++|+.+. |+++|++|||.+.+ +.|.. ........+.++..+... +..++.+ +.+|||+|++++.
T Consensus 212 ~GC~GG~~~~a~~yi~~~-Gi~~e~~yPY~~~~-~~c~~~~~~~~~~~~~~~~~~~~~~e~~l~~~-v~~gPvsvai~a~ 288 (363)
T 3tnx_A 212 YGCNGGYPWSALQLVAQY-GIHYRNTYPYEGVQ-RYCRSREKGPYAAKTDGVRQVQPYNEGALLYS-IANQPVSVVLEAA 288 (363)
T ss_dssp CTTBCCCHHHHHHHHHHT-CBCBTTTSCCCSSC-CCCCGGGGCSCSBCCCEEEEECSSCHHHHHHH-HTTSCEEEEECCC
T ss_pred CCCCCCChHHHHhHHHhc-CccccccCCCcCcC-CCcccCCCCCceeeccceEEcchhhHHHHHHH-HHcCCcEEEEEec
Confidence 899999999999999876 99999999999988 65554 344445566777777664 5555554 5679999999876
Q ss_pred c--ccccCCCeeecCCCCCcCCeEEEEEEecccCCcCCcCCCCCEEEEEcCCCCCCCCCcEEEEEeCC----Ceeccccc
Q 017548 284 W--MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR----NVCGVDSM 357 (369)
Q Consensus 284 ~--f~~y~~Gi~~~~~~~~~~~Hav~iVGyg~~~~~~~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~~----n~cgi~~~ 357 (369)
. |++|++|||.. +|+..++|||+|||||++ |||||||||++|||+|||||+||. |+|||++.
T Consensus 289 ~~~F~~Y~sGVy~~-~~~~~lnHaV~iVGyG~~-----------YWIVKNSWGt~WGe~GY~rI~Rg~~~~~~~CGI~~~ 356 (363)
T 3tnx_A 289 GKDFQLYRGGIFVG-PCGNKVDHAVAAVGYGPN-----------YILIRNSWGTGWGENGYIRIKRGTGNSYGVCGLYTS 356 (363)
T ss_dssp SHHHHTEEEEEECC-CCCSCCCEEEEEEEEETT-----------EEEEECSBCTTSTBTTEEEEECCSCCSSCGGGTTSC
T ss_pred chhhhCCCCCEECC-CCCCCCCeEEEEEEcCCC-----------cEEEEeCCCCccccCcEEEEEcCCCCCCCcCCccce
Confidence 4 99999999975 477779999999999964 999999999999999999999986 46999999
Q ss_pred eeeEE
Q 017548 358 VSSVA 362 (369)
Q Consensus 358 ~~~~~ 362 (369)
++++.
T Consensus 357 a~yPi 361 (363)
T 3tnx_A 357 SFYPV 361 (363)
T ss_dssp EEEEE
T ss_pred eeecc
Confidence 98764
No 6
>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A*
Probab=100.00 E-value=6.8e-82 Score=594.07 Aligned_cols=300 Identities=38% Similarity=0.709 Sum_probs=259.9
Q ss_pred HHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHhcCC----CCCeeeeeccCCCCChHHHHhhhcCCccCCCCCC
Q 017548 49 AEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLL----DPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPA 124 (369)
Q Consensus 49 ~~~~f~~f~~~~~k~Y~~~~e~~~R~~iF~~N~~~I~~~N~~----~~s~~~giN~FaDlt~~Ef~~~~~~~~~~~~~~~ 124 (369)
.+.+|++|+++|+|+| +.+|+.+|+.+|++|+++|++||+. +.+|++|+|+|+|||.+||++.+++.++......
T Consensus 8 ~~~~f~~~~~~~~k~Y-~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~~~~~g~N~F~Dlt~eEf~~~~~g~~~~~~~~~ 86 (316)
T 1cs8_A 8 LEAQWTKWKAMHNRLY-GMNEEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPRKG 86 (316)
T ss_dssp GHHHHHHHHHHTTCCC-CTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCCTTTTCCHHHHHHHHCCBCCCCCSCC
T ss_pred HHHHHHHHHHHhCCCC-CHHHHHHHHHHHHHHHHHHHHhhhccccCCcceEEccCccCCCCHHHHHHHhcCCCCCccccC
Confidence 4568999999999999 7789999999999999999999974 4689999999999999999988887654211100
Q ss_pred CCCCCCCCCCCCCCCceeccCCCCCCcccCCCCCccHHHHHhhhHHHHHHhhhcCCccccChhHhhhcCCCCCCCCCCCC
Q 017548 125 DAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSC 204 (369)
Q Consensus 125 ~~~~~~~~~~~~lP~~~Dwr~~g~v~pV~dQg~cgsCwAfa~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~~~~~~~ 204 (369)
.........+||++||||++|+|+||||||.||||||||++++||+++++++|+.++||+|+|+||+.. .+
T Consensus 87 --~~~~~~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~g~~~~LSeq~lvdC~~~-------~g 157 (316)
T 1cs8_A 87 --KVFQEPLFYEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGP-------QG 157 (316)
T ss_dssp --EECCCCTTCCCCSCEEGGGGTCCCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGG-------GT
T ss_pred --ccccCccccCCCCcEecCCCCCcCCCCcccCCccHHHHHHHHHHHHHHHHHcCCCcCcCHHHHHHhccc-------cC
Confidence 000111124799999999999999999999999999999999999999999999999999999999863 13
Q ss_pred CCCCCCCChHHHHHHHHHcCCcCCCCCcccCCCCCCCccCCCCCceEEeeeeEecCchHHHHHHHHHhcCCeEEEEEccc
Q 017548 205 DSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW 284 (369)
Q Consensus 205 ~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPy~~~~~~~c~~~~~~~~~~i~~~~~~~~~~~~ik~~l~~~gPV~v~~~~~~ 284 (369)
+.||+||++..|++|+.+++||++|++|||.+.+ +.|+..+....+++++|..++.++++||++|+++|||+|+|++..
T Consensus 158 ~~gC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~-~~C~~~~~~~~~~i~~~~~v~~~~~~ik~~l~~~GPV~v~i~~~~ 236 (316)
T 1cs8_A 158 NEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATE-ESCKYNPKYSVANDAGFVDIPKQEKALMKAVATVGPISVAIDAGH 236 (316)
T ss_dssp CCGGGCBCHHHHHHHHHHHTCEEBTTTSCCCSSC-CCCCCCGGGEEECCCCEEECCSCHHHHHHHHHHHCCEEEEECCCS
T ss_pred CCCCCCCCHHHHHHHHHHhCCcCchhccCCCCCC-CCcCCCCccceeEeccEEEeCCCHHHHHHHHHhcCCEEEEEecCC
Confidence 6899999999999999866699999999999988 899987666678899999988789999999999999999999873
Q ss_pred --ccccCCCeeecCCCCC-cCCeEEEEEEecccCCcCCcCCCCCEEEEEcCCCCCCCCCcEEEEEeCC-Ceeccccceee
Q 017548 285 --MQTYIGGVSCPYICGK-YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVSS 360 (369)
Q Consensus 285 --f~~y~~Gi~~~~~~~~-~~~Hav~iVGyg~~~~~~~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~~-n~cgi~~~~~~ 360 (369)
|++|++|||..+.|+. .++|||+|||||++.. +++|++|||||||||++|||+|||||+|+. |.|||++.++.
T Consensus 237 ~~f~~Y~~Gvy~~~~c~~~~~~HaV~iVGygd~~~---~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~n~CgI~~~~~~ 313 (316)
T 1cs8_A 237 ESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFEST---ESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASY 313 (316)
T ss_dssp HHHHTEEEEEECCTTCCSSCCCEEEEEEEEEEECC---SSCCEEEEEEECSBCTTSTBTTEEEEECSSSSGGGTTTSCEE
T ss_pred hhhccccCceECCCCCCCCCCCEEEEEEEecCCcc---cCCCCcEEEEEcCCCCCcccCCEEEEECCCCCccCccceeeE
Confidence 9999999998877986 5999999999993210 125789999999999999999999999997 89999999987
Q ss_pred EE
Q 017548 361 VA 362 (369)
Q Consensus 361 ~~ 362 (369)
+.
T Consensus 314 p~ 315 (316)
T 1cs8_A 314 PT 315 (316)
T ss_dssp EC
T ss_pred ee
Confidence 64
No 7
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica}
Probab=100.00 E-value=6.7e-82 Score=592.60 Aligned_cols=297 Identities=34% Similarity=0.694 Sum_probs=257.8
Q ss_pred HHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHhcCC----CCCeeeeeccCCCCChHHHHhhhcC-CccCCCCCC
Q 017548 50 EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLL----DPTAVHGVTKFSDLTPSEFRRQFLG-LNRRLRLPA 124 (369)
Q Consensus 50 ~~~f~~f~~~~~k~Y~~~~e~~~R~~iF~~N~~~I~~~N~~----~~s~~~giN~FaDlt~~Ef~~~~~~-~~~~~~~~~ 124 (369)
+.+|++|+++|+|+|.+.+|+.+| .+|++|+++|++||+. +.+|++|+|+|+|||.+||++.+++ .+.......
T Consensus 2 ~~~f~~~~~~~~K~Y~~~~E~~~R-~iF~~N~~~I~~~N~~~~~g~~~~~~g~N~F~Dlt~eEf~~~~~g~~~~~~~~~~ 80 (310)
T 2o6x_A 2 DDLWHQWKRMYNKEYNGADDQHRR-NIWEKNVKHIQEHNLRHDLGLVTYTLGLNQFTDMTFEEFKAKYLTEMSRASDILS 80 (310)
T ss_dssp HHHHHHHHHHHTCCCCHHHHHHHH-HHHHHHHHHHHHHHHHHHTTSSSEEECCCTTTTSCHHHHHHHHCCCCCCGGGGSC
T ss_pred hHHHHHHHHHhCCCCCCHHHHHHH-HHHHHHHHHHHHHHhhhccCCCcEEEeccccCCCCHHHHHHHhcCCCCCcccccc
Confidence 357999999999999988899999 9999999999999965 4689999999999999999988877 543211000
Q ss_pred CCCCCCCCCCCCCCCceeccCCCCCCcccCCCCCccHHHHHhhhHHHHHHhhhcCCccccChhHhhhcCCCCCCCCCCCC
Q 017548 125 DAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSC 204 (369)
Q Consensus 125 ~~~~~~~~~~~~lP~~~Dwr~~g~v~pV~dQg~cgsCwAfa~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~~~~~~~ 204 (369)
....... ...+||++||||++|+|+||||||.||||||||++++||+++++++++.+.||+|+|+||+.. ..
T Consensus 81 ~~~~~~~-~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAfa~~~alE~~~~i~~g~~~~LS~q~lvdC~~~-------~~ 152 (310)
T 2o6x_A 81 HGVPYEA-NNRAVPDKIDWRESGYVTEVKDQGNCGSGWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSRP-------WG 152 (310)
T ss_dssp SSEECCC-----CCSCEEGGGGTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHSSCCCBCHHHHHHHCGG-------GT
T ss_pred cCCcccc-ccCCCCCeEecCcCCCCCCcccCCCCCccHHHHhHHHHHHHHHHHhCCCcCcCHHHHHHhhhc-------cC
Confidence 0000000 112699999999999999999999999999999999999999999999999999999999863 13
Q ss_pred CCCCCCCChHHHHHHHHHcCCcCCCCCcccCCCCCCCccCCCCCceEEeeeeEecCc-hHHHHHHHHHhcCCeEEEEEcc
Q 017548 205 DSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISS-DEDQMAANLVKHGPLAVGINAV 283 (369)
Q Consensus 205 ~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPy~~~~~~~c~~~~~~~~~~i~~~~~~~~-~~~~ik~~l~~~gPV~v~~~~~ 283 (369)
+.||+||++..|++|+. ++||++|++|||.+.+ +.|+.+.....+++++|..++. ++++||++|+++|||+|+|++.
T Consensus 153 ~~gC~GG~~~~a~~yi~-~~Gi~~e~~yPY~~~~-~~C~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~~GPV~v~i~~~ 230 (310)
T 2o6x_A 153 NNGCGGGLMENAYQYLK-QFGLETESSYPYTAVE-GQCRYNKQLGVAKVTGFYTVHSGSEVELKNLVGAEGPAAVAVDVE 230 (310)
T ss_dssp CCGGGCCCHHHHHHHHT-TSCBCBTTTSCCCSSC-CCCCCCGGGCCEEEEEEEEECSCCHHHHHHHHHHHCCEEEEECCC
T ss_pred CCCCCCCCHHHHHHHHH-HCCcCchhcCCCCCCC-CCccCCCCCCceEeCeEEEeCCCCHHHHHHHHHhcCCeEEEEecc
Confidence 78999999999999998 5599999999999987 8999876666788999999975 8999999999999999999987
Q ss_pred c-ccccCCCeeecCCCCC-cCCeEEEEEEecccCCcCCcCCCCCEEEEEcCCCCCCCCCcEEEEEeCC-Ceeccccceee
Q 017548 284 W-MQTYIGGVSCPYICGK-YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVSS 360 (369)
Q Consensus 284 ~-f~~y~~Gi~~~~~~~~-~~~Hav~iVGyg~~~~~~~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~~-n~cgi~~~~~~ 360 (369)
. |++|++|||..+.|+. .++|||+|||||++ +|++|||||||||++|||+|||||+|+. |+|||++.++.
T Consensus 231 ~~f~~Y~~Gvy~~~~c~~~~~~HaV~iVGyg~~-------~g~~yWivkNSWG~~WGe~GY~~i~r~~~n~Cgi~~~~~~ 303 (310)
T 2o6x_A 231 SDFMMYRSGIYQSQTCSPLRVNHAVLAVGYGTQ-------GGTDYWIVKNSWGLSWGERGYIRMVRNRGNMCGIASLASL 303 (310)
T ss_dssp HHHHTEEEEEECCSSCCTTCCCEEEEEEEEEEE-------TTEEEEEEECSBCTTSTBTTEEEEECSSSSGGGTTTSEEE
T ss_pred hhhhhCCCceecCCCCCCCCCCEEEEEEEEecc-------CCceEEEEEeCCCCccCCCcEEEEEcCCCCcCCccceeeE
Confidence 5 9999999998778975 58999999999987 6899999999999999999999999997 89999999988
Q ss_pred EEEe
Q 017548 361 VAAI 364 (369)
Q Consensus 361 ~~~~ 364 (369)
+...
T Consensus 304 p~~~ 307 (310)
T 2o6x_A 304 PMVA 307 (310)
T ss_dssp EEEE
T ss_pred EEee
Confidence 7653
No 8
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1
Probab=100.00 E-value=8.5e-81 Score=587.60 Aligned_cols=295 Identities=34% Similarity=0.644 Sum_probs=257.9
Q ss_pred cHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeeeccCCCCChHHHHhhhcCCccCCCCC-CCC
Q 017548 48 NAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLP-ADA 126 (369)
Q Consensus 48 ~~~~~f~~f~~~~~k~Y~~~~e~~~R~~iF~~N~~~I~~~N~~~~s~~~giN~FaDlt~~Ef~~~~~~~~~~~~~~-~~~ 126 (369)
....+|++|+++|+|+|.+.+|+.+|+.+|++|+++|++||+.+.+|++|+|+|+|||.+||++++++.+...... ...
T Consensus 17 ~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~~N~~~~~~~~g~N~FaDlt~eEf~~~~~g~~~~~~~~~~~~ 96 (322)
T 1pci_A 17 RLIQLFNSWMLNHNKFYENVDEKLYRFEIFKDNLNYIDETNKKNNSYWLGLNEFADLSNDEFNEKYVGSLIDATIEQSYD 96 (322)
T ss_dssp HHHHHHHHHHHTTTCCCSSHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECSCTTTTSCHHHHHHHHCCCBCCCSSCCCCS
T ss_pred HHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHhhccCCceEEecCccccCCHHHHHHHhcCCCCccccccccc
Confidence 3456899999999999998899999999999999999999988789999999999999999999888765321110 000
Q ss_pred CCCCCCCCCCCCCceeccCCCCCCcccCCCCCccHHHHHhhhHHHHHHhhhcCCccccChhHhhhcCCCCCCCCCCCCCC
Q 017548 127 QKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDS 206 (369)
Q Consensus 127 ~~~~~~~~~~lP~~~Dwr~~g~v~pV~dQg~cgsCwAfa~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~~~~~~~~~ 206 (369)
..........||++||||++|+|+||||||.||||||||++++||+++++++|+.+.||+|+|+||+. ++.
T Consensus 97 ~~~~~~~~~~lP~~~DwR~~g~vt~VkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~lSeq~lvdC~~---------~~~ 167 (322)
T 1pci_A 97 EEFINEDIVNLPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCER---------RSH 167 (322)
T ss_dssp EECCCCCCCCSCSCEETTTTTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHSCT---------TSC
T ss_pred cccccccccCCCCeEecccCCCCCCccccccCCccHHHHHHHHHHHHHHHHcCCccccCHHHHHhhcC---------CCC
Confidence 00111122479999999999999999999999999999999999999999999999999999999985 278
Q ss_pred CCCCCChHHHHHHHHHcCCcCCCCCcccCCCCCCCccCCC-CCceEEeeeeEecCc-hHHHHHHHHHhcCCeEEEEEcc-
Q 017548 207 GCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDK-SKIAAAVSNFSVISS-DEDQMAANLVKHGPLAVGINAV- 283 (369)
Q Consensus 207 gC~GG~~~~a~~~~~~~~Gi~~e~~yPy~~~~~~~c~~~~-~~~~~~i~~~~~~~~-~~~~ik~~l~~~gPV~v~~~~~- 283 (369)
||+||++..|++|+.++ ||++|++|||.+.+ +.|+... ....+++++|..++. ++++||++|++ |||+|+|++.
T Consensus 168 gC~GG~~~~a~~yi~~~-Gi~~e~~yPY~~~~-~~C~~~~~~~~~~~i~~~~~v~~~~e~~l~~~l~~-GPV~v~i~~~~ 244 (322)
T 1pci_A 168 GCKGGYPPYALEYVAKN-GIHLRSKYPYKAKQ-GTCRAKQVGGPIVKTSGVGRVQPNNEGNLLNAIAK-QPVSVVVESKG 244 (322)
T ss_dssp GGGCBCHHHHHHHHHHH-CBCBTTTSCCCSSC-CCCTTTTCCSCCBCCCCEEECCSSBHHHHHHHHHH-SCEEEEECTTC
T ss_pred CCCCCCHHHHHHHHHHh-CCCchhhCCCCCCC-CCCCCCCCCCceEEEeeEEEeCCCcHHHHHHHHHH-CCEEEEEeccc
Confidence 99999999999999988 79999999999988 8998764 335678889998876 78899999976 9999999996
Q ss_pred c-ccccCCCeeecCCCCCcCCeEEEEEEecccCCcCCcCCCCCEEEEEcCCCCCCCCCcEEEEEeCC----Ceeccccce
Q 017548 284 W-MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR----NVCGVDSMV 358 (369)
Q Consensus 284 ~-f~~y~~Gi~~~~~~~~~~~Hav~iVGyg~~~~~~~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~~----n~cgi~~~~ 358 (369)
. |++|++|||.+ +|+..++|||+|||||++ +|++|||||||||++|||+|||||+|+. |.|||++.+
T Consensus 245 ~~f~~Y~~Gvy~~-~c~~~~~HaV~iVGyg~~-------~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~n~CgI~~~~ 316 (322)
T 1pci_A 245 RPFQLYKGGIFEG-PCGTKVDGAVTAVGYGKS-------GGKGYILIKNSWGTAWGEKGYIRIKRAPGNSPGVCGLYKSS 316 (322)
T ss_dssp HHHHTEEEEEECC-SCCSCCCEEEEEEEEEEE-------TTEEEEEEECSBCSSSTBTTEEEEECCCSBSSCGGGGGGCC
T ss_pred ccccccCCeEeCC-CCCCCCCEEEEEEEEecc-------CCccEEEEEeCCCCcccCCeEEEEEcCCCCCCCcCCcccce
Confidence 3 99999999975 588779999999999988 6899999999999999999999999996 899999999
Q ss_pred eeEE
Q 017548 359 SSVA 362 (369)
Q Consensus 359 ~~~~ 362 (369)
+.+.
T Consensus 317 ~yp~ 320 (322)
T 1pci_A 317 YYPT 320 (322)
T ss_dssp EEEC
T ss_pred eEEE
Confidence 8875
No 9
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1
Probab=100.00 E-value=8.7e-79 Score=570.59 Aligned_cols=287 Identities=29% Similarity=0.517 Sum_probs=250.4
Q ss_pred HHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeeeccCCCCChHHHHhhhcCCccCCCC-CCCCCCCC
Q 017548 52 HFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRL-PADAQKAP 130 (369)
Q Consensus 52 ~f~~f~~~~~k~Y~~~~e~~~R~~iF~~N~~~I~~~N~~~~s~~~giN~FaDlt~~Ef~~~~~~~~~~~~~-~~~~~~~~ 130 (369)
.|++|+++|+|+|.+.+|+.+|+.+|++|+++|++ |. + |+|+|+|||.+||++.+++.+..... .......+
T Consensus 7 ~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~-N~---~---g~N~F~Dlt~eEf~~~~~~~~~~~~~~~~~~~~~~ 79 (312)
T 1xkg_A 7 TFEEYKKAFNKSYATFEDEEAARKNFLESVKYVQS-NG---G---AINHLSDLSLDEFKNRFLMSAEAFEHLKTQFDLNA 79 (312)
T ss_dssp SHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHH-HC---C---CCCTTTTSCHHHHHHHHSBCHHHHHHHHHHHC---
T ss_pred HHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHh-cc---C---CCCcccCCCHHHHHHHhcCCCCccccccCCccccc
Confidence 49999999999999889999999999999999999 74 2 99999999999999877764321100 00000000
Q ss_pred C----CCCCCCCCceeccCCCCCCcccCCCCCccHHHHHhhhHHHHHHhhhcCCccccChhHhhhcCCCCCCCCCCCCCC
Q 017548 131 I----LPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDS 206 (369)
Q Consensus 131 ~----~~~~~lP~~~Dwr~~g~v~pV~dQg~cgsCwAfa~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~~~~~~~~~ 206 (369)
. .....||++||||++|+|+||||||.||||||||++++||+++++++|+.+.||+|+|+||+. ..
T Consensus 80 ~~~~~~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~g~~~~LSeq~lvdC~~----------~~ 149 (312)
T 1xkg_A 80 ETNACSINGNAPAEIDLRQMRTVTPIRMQGGCGSAWAFSGVAATESAYLAYRDQSLDLAEQELVDCAS----------QH 149 (312)
T ss_dssp --CBCCCCSCCCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHTC----------SS
T ss_pred ccccccccccCCCccccccCCCcCCccccCCCCccHHHHHHHHHHHHHHHHhCCCCCcCHHHHHhccC----------CC
Confidence 0 011379999999999999999999999999999999999999999999999999999999982 37
Q ss_pred CCCCCChHHHHHHHHHcCCcCCCCCcccCCCCCCCccCCCCCceEEeeeeEecCc-hHHHHHHHHHh-cCCeEEEEEcc-
Q 017548 207 GCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISS-DEDQMAANLVK-HGPLAVGINAV- 283 (369)
Q Consensus 207 gC~GG~~~~a~~~~~~~~Gi~~e~~yPy~~~~~~~c~~~~~~~~~~i~~~~~~~~-~~~~ik~~l~~-~gPV~v~~~~~- 283 (369)
||+||++..|++|+.+. ||++|++|||.+.. +.|+ +.....+++++|..++. ++++||++|++ +|||+|+|++.
T Consensus 150 GC~GG~~~~a~~yi~~~-Gi~~e~~yPY~~~~-~~C~-~~~~~~~~i~~y~~v~~~~~~~ik~al~~~~GPV~v~i~~~~ 226 (312)
T 1xkg_A 150 GCHGDTIPRGIEYIQHN-GVVQESYYRYVARE-QSCR-RPNAQRFGISNYCQIYPPNANKIREALAQTHSAIAVIIGIKD 226 (312)
T ss_dssp TTBCCCHHHHHHHHHHH-CEEBGGGSCCCSSC-CCCC-CCSSCEECCSEEEECCSCCHHHHHHHHHHHCCCEEEEEEESC
T ss_pred CCCCCCHHHHHHHHHHc-CCCccccCCccCCC-CCCC-CCCCceEEEeeEEEeCCCCHHHHHHHHHhcCCCEEEEEEecc
Confidence 99999999999999885 99999999999987 8999 65556788999999975 89999999999 99999999987
Q ss_pred --cccccCCCeeecCCCC-C-cCCeEEEEEEecccCCcCCcCCCCCEEEEEcCCCCCCCCCcEEEEEeCCCeecccccee
Q 017548 284 --WMQTYIGGVSCPYICG-K-YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVS 359 (369)
Q Consensus 284 --~f~~y~~Gi~~~~~~~-~-~~~Hav~iVGyg~~~~~~~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~~n~cgi~~~~~ 359 (369)
.|++|++|||..+.|+ . . +|||+|||||++ +|++|||||||||++|||+|||||+|+.|.|||++.++
T Consensus 227 ~~~f~~Y~~GVy~~~~c~~~~~-~HaV~iVGyg~~-------~g~~yWivkNSWG~~WGe~GY~~i~r~~n~CgI~~~~~ 298 (312)
T 1xkg_A 227 LDAFRHYDGRTIIQRDNGYQPN-YHAVNIVGYSNA-------QGVDYWIVRNSWDTNWGDNGYGYFAANIDLMMIEEYPY 298 (312)
T ss_dssp HHHHHTCCSSSCBCCCCSSCCE-EEEEEEEEEEEE-------TTEEEEEEECSBCTTSTBTTEEEEECSSCGGGTTTCCE
T ss_pred cccccccCCcEEcCCCCCCCcC-ceEEEEEEEecc-------CCceEEEEEeCCCCcccCCcEEEEEcCCCcccccceeE
Confidence 5999999999988887 4 6 999999999987 68999999999999999999999999999999999999
Q ss_pred eEEEecc
Q 017548 360 SVAAIHT 366 (369)
Q Consensus 360 ~~~~~~~ 366 (369)
++.+..|
T Consensus 299 ~~~~~~~ 305 (312)
T 1xkg_A 299 VVILGQT 305 (312)
T ss_dssp EEECTTC
T ss_pred EeeccCC
Confidence 9887665
No 10
>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C*
Probab=100.00 E-value=3.8e-73 Score=553.12 Aligned_cols=283 Identities=31% Similarity=0.569 Sum_probs=191.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCeeee-eccCCCCChHHHHhhhcCCccCCCCCCCCCC--CCCCCCCCCCCceecc
Q 017548 68 EEHDYRFRVFKANLRRAKRRQLLDPTAVHG-VTKFSDLTPSEFRRQFLGLNRRLRLPADAQK--APILPTNDLPTDFDWR 144 (369)
Q Consensus 68 ~e~~~R~~iF~~N~~~I~~~N~~~~s~~~g-iN~FaDlt~~Ef~~~~~~~~~~~~~~~~~~~--~~~~~~~~lP~~~Dwr 144 (369)
-+..+|+.||++|+++|++||+.+.+|+++ +|+|+|||.+||++++++.+.....+..... .......+||++||||
T Consensus 135 ~~~~~R~~if~~N~~~I~~~N~~~~~~~~~~~n~faDlT~eEf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~s~DwR 214 (441)
T 3pdf_A 135 SQEKYSNRLYKYDHNFVKAINAIQKSWTATTYMEYETLTLGDMIRRSGGHSRKIPRPKPAPLTAEIQQKILFLPTSWDWR 214 (441)
T ss_dssp -----------------------------------------------------------------------CCCSCEETT
T ss_pred hhHHHHHHHHHHHHHHHHHHHccCCceEeecccccccCCHHHHHHHhCCCcccccccccCccccccccccccCCCCEECC
Confidence 455789999999999999999988899998 8999999999999988765432111100000 0011235799999999
Q ss_pred CCC---CCCcccCCCCCccHHHHHhhhHHHHHHhhhcCCcc--ccChhHhhhcCCCCCCCCCCCCCCCCCCCChHHH-HH
Q 017548 145 DHG---AVTGVKDQGACGSCWSFSATGALEGAHFLSTGELV--SLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSA-FE 218 (369)
Q Consensus 145 ~~g---~v~pV~dQg~cgsCwAfa~~~~le~~~~~~~~~~~--~lS~q~l~dc~~~~~~~~~~~~~~gC~GG~~~~a-~~ 218 (369)
+++ +|+||||||.||||||||++++||++++|++++.. .||+|+|+||+.. +.||+||++..+ ++
T Consensus 215 ~~~g~~~VtpVkdQG~CGSCWAFsa~~alE~~~~i~tg~~~~~~LSeQ~LvdC~~~---------~~GC~GG~~~~aa~~ 285 (441)
T 3pdf_A 215 NVHGINFVSPVRNQASCGSCYSFASMGMLEARIRILTNNSQTPILSPQEVVSCSQY---------AQGCEGGFPYLIAGK 285 (441)
T ss_dssp CBTTBCCSCCCCBCTTSBCHHHHHHHHHHHHHHHHHHTTSCCCCBCHHHHHHHCTT---------SCTTBCCCHHHHTTH
T ss_pred cCCCCCccCcccccCCCchHHHHHHHHHHHHHHHHhccCCCccccCHHHHHhhccC---------CCCCCCCchhHHHHH
Confidence 964 89999999999999999999999999999998764 4999999999863 789999999987 89
Q ss_pred HHHHcCCcCCCCCcccCCCCCCCccCCCCCceEEeeeeEecC-----chHHHHHHHHHhcCCeEEEEEccc-ccccCCCe
Q 017548 219 YILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVIS-----SDEDQMAANLVKHGPLAVGINAVW-MQTYIGGV 292 (369)
Q Consensus 219 ~~~~~~Gi~~e~~yPy~~~~~~~c~~~~~~~~~~i~~~~~~~-----~~~~~ik~~l~~~gPV~v~~~~~~-f~~y~~Gi 292 (369)
|+.+. ||++|++|||.+.+ +.|+.......+.+.+|..+. .++++||++|+++|||+|+|++.. |++|++||
T Consensus 286 yi~~~-Gi~tE~~yPY~~~~-~~C~~~~~~~~~~~~~y~~v~~~~~~~~e~~ik~al~~~GPVsvai~a~~~F~~Y~sGV 363 (441)
T 3pdf_A 286 YAQDF-GLVEEACFPYTGTD-SPCKMKEDCFRYYSSEYHYVGGFYGGCNEALMKLELVHHGPMAVAFEVYDDFLHYKKGI 363 (441)
T ss_dssp HHHHT-CBCBGGGSCCCSSC-CCSCCCSSCCCBCEEEEEETTSSTTCCCHHHHHHHHHHHCCEEEEECCCGGGGGCCSSE
T ss_pred HHHhc-CCCcHHHeeecccC-CCCCCccccceeeeccEEEeCCccCCCcHHHHHHHHHHCCCeEEEEEecccccccCCce
Confidence 99877 99999999999987 899987666667778888875 378999999999999999999875 99999999
Q ss_pred eecCCCCC------cCCeEEEEEEecccCCcCCcCCCCCEEEEEcCCCCCCCCCcEEEEEeCCCeeccccceeeEEEecc
Q 017548 293 SCPYICGK------YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIHT 366 (369)
Q Consensus 293 ~~~~~~~~------~~~Hav~iVGyg~~~~~~~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~~n~cgi~~~~~~~~~~~~ 366 (369)
|....|.. .++|||+|||||++. .+|++|||||||||++|||+|||||+||.|+|||+++++++.|.+.
T Consensus 364 y~~~~~~~~~~~~~~~~HaV~iVGyG~~~-----~~G~~YWIVkNSWG~~WGe~GYfri~rg~n~CGI~s~~~a~~P~~~ 438 (441)
T 3pdf_A 364 YHHTGLRDPFNPFELTNHAVLLVGYGTDS-----ASGMDYWIVKNSWGTGWGENGYFRIRRGTDECAIESIAVAATPIPK 438 (441)
T ss_dssp ECCC---CCCCCCCCCCEEEEEEEEEECT-----TTCCEEEEEECSBCTTSTBTTEEEEECSSCGGGTTSCCEEEEECCC
T ss_pred EecCCCCcccCCCCcCCeEEEEEEecccC-----CCCceEEEEEcCCCCCcCCCeEEEEEcCCCccCCCCceEEeeccCC
Confidence 98665532 389999999999851 2688999999999999999999999999999999999999998765
No 11
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} SCOP: d.3.1.0 PDB: 4hwy_A* 3mor_A*
Probab=100.00 E-value=4.3e-72 Score=528.46 Aligned_cols=278 Identities=25% Similarity=0.428 Sum_probs=186.8
Q ss_pred HHHHHHHHHHHHHHHhcCCC-CCeeeeec-cCCCCChHHHHhhhcCCccCCCCCCCCCCCCCC---CCCCCCCceeccCC
Q 017548 72 YRFRVFKANLRRAKRRQLLD-PTAVHGVT-KFSDLTPSEFRRQFLGLNRRLRLPADAQKAPIL---PTNDLPTDFDWRDH 146 (369)
Q Consensus 72 ~R~~iF~~N~~~I~~~N~~~-~s~~~giN-~FaDlt~~Ef~~~~~~~~~~~~~~~~~~~~~~~---~~~~lP~~~Dwr~~ 146 (369)
.|+..+..+.++|+++|+.+ .+|++|+| +|+|||.+||+++ ++..+...........+.. ...+||++||||++
T Consensus 3 ~~~~a~~~~~~~i~~~N~~~~~~~~~~~n~~f~dlt~eE~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~lP~s~DwR~~ 81 (325)
T 3hhi_A 3 VAEDAPVLSKAFVDRVNRLNRGIWKAKYDGVMQNITLREAKRL-NGVIKKNNNASILPKRRFTEEEARAPLPSSFDSAEA 81 (325)
T ss_dssp ------------------------------------------------------CCSCBCCCCHHHHHCCCCSCEEHHHH
T ss_pred cccccccccHHHHHHHHhCCCCceEEecccccccCCHHHHHHH-hCCCCCCcccccccCccccccccccCCCCcEehhHh
Confidence 56677788899999999864 78999999 8999999999875 4433211110000001110 12579999999998
Q ss_pred ----CCCCcccCCCCCccHHHHHhhhHHHHHHhhhcCC-ccccChhHhhhcCCCCCCCCCCCCCCCCCCCChHHHHHHHH
Q 017548 147 ----GAVTGVKDQGACGSCWSFSATGALEGAHFLSTGE-LVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYIL 221 (369)
Q Consensus 147 ----g~v~pV~dQg~cgsCwAfa~~~~le~~~~~~~~~-~~~lS~q~l~dc~~~~~~~~~~~~~~gC~GG~~~~a~~~~~ 221 (369)
|.|+||||||.||||||||++++||++++|++++ .++||+|+|+||+.. ++.||+||++..|++|+.
T Consensus 82 w~~~g~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~~~~~~~LSeQ~LvdC~~~--------~~~GC~GG~~~~A~~yi~ 153 (325)
T 3hhi_A 82 WPNCPTIPQIADQSACGSCWAVAAASAMSDRFCTMGGVQDVHISAGDLLACCSD--------CGDGCNGGDPDRAWAYFS 153 (325)
T ss_dssp STTCTTTTCCCBCCSSBCHHHHHHHHHHHHHHHHTSSCSSCCBCHHHHHHHCGG--------GBCTTBCBCHHHHHHHHH
T ss_pred cCCCCccccccCCCCccccHHHHHHHHHHHHHHHHhCCCccccCHHHHHHhccC--------CCCCCCCCCHHHHHHHHH
Confidence 8999999999999999999999999999999997 899999999999863 378999999999999999
Q ss_pred HcCCcCCCCCcccC-CC---------CCCCccCC-------------C---CCceEEeeeeEecCchHHHHHHHHHhcCC
Q 017548 222 KAGGVEREKDYPYT-GT---------DGGSCKFD-------------K---SKIAAAVSNFSVISSDEDQMAANLVKHGP 275 (369)
Q Consensus 222 ~~~Gi~~e~~yPy~-~~---------~~~~c~~~-------------~---~~~~~~i~~~~~~~~~~~~ik~~l~~~gP 275 (369)
++ |+++|++|||. +. ..+.|... . ....+.+..|. + .++++||++|+++||
T Consensus 154 ~~-Gi~~e~~yPY~~~~c~~~~~~~~~~~~C~~~~~~~~~c~~~c~~~~~~~~~~~~~~~y~-v-~~~~~i~~~i~~~GP 230 (325)
T 3hhi_A 154 ST-GLVSDYCQPYPFPHCSHHSKSKNGYPPCSQFNFDTPKCDYTCDDPTIPVVNYRSWTSYA-L-QGEDDYMRELFFRGP 230 (325)
T ss_dssp HT-CBCBTTTSCCSSCCCBSSSCCTTCCCBGGGCCCCCCCCCSSCSSTTSCCCCBCEEEEEE-E-CSHHHHHHHHHHHCC
T ss_pred Hh-CCCcccccCCccccccccccccccCCCCCCcccCCcchhhcccccccccceEEeecceE-e-CCHHHHHHHHHHCCC
Confidence 88 99999999998 32 01456510 0 01223456776 5 689999999999999
Q ss_pred eEEEEEccc-ccccCCCeeecCCCCCcCCeEEEEEEecccCCcCCcCCCCCEEEEEcCCCCCCCCCcEEEEEeCCCeecc
Q 017548 276 LAVGINAVW-MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGV 354 (369)
Q Consensus 276 V~v~~~~~~-f~~y~~Gi~~~~~~~~~~~Hav~iVGyg~~~~~~~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~~n~cgi 354 (369)
|+|+|++.. |++|++|||....+...++|||+|||||++ +|++|||||||||++|||+|||||+||.|+|||
T Consensus 231 V~v~i~~~~~f~~Y~~GVy~~~~~~~~~~HaV~iVGyG~~-------~g~~YWivkNSWG~~WGe~GY~~i~rg~n~CGI 303 (325)
T 3hhi_A 231 FEVAFDVYEDFIAYNSGVYHHVSGQYLGGHAVRLVGWGTS-------NGVPYWKIANSWNTEWGMDGYFLIRRGSSECGI 303 (325)
T ss_dssp EEEEEEEEHHHHTCCSSEECCCSCCEEEEEEEEEEEEEEE-------TTEEEEEEECSBCTTSTBTTEEEEECSSCGGGT
T ss_pred EEEEEEeccccccccCceecCCCCCCCCCEEEEEEEEEec-------CCceEEEEEeCCCCCcccCCEEEEEcCCCeecC
Confidence 999999865 999999999765444447999999999987 789999999999999999999999999999999
Q ss_pred ccceeeEEEeccCC
Q 017548 355 DSMVSSVAAIHTTS 368 (369)
Q Consensus 355 ~~~~~~~~~~~~~~ 368 (369)
++.+++..|.+++|
T Consensus 304 ~~~~~~g~p~~~~~ 317 (325)
T 3hhi_A 304 EDGGSAGIPLAPNT 317 (325)
T ss_dssp TSCEEEEEEC----
T ss_pred ccceEEeecCCCCc
Confidence 99999999999987
No 12
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A
Probab=100.00 E-value=8.7e-68 Score=498.23 Aligned_cols=266 Identities=27% Similarity=0.529 Sum_probs=211.6
Q ss_pred HHHHHHHhcCCCCCeeeeeccCCCCChHHHHhhhcCCccCCCCCCCCCCCCCCCCCCCCCceeccCC----CCCCcccCC
Q 017548 80 NLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDH----GAVTGVKDQ 155 (369)
Q Consensus 80 N~~~I~~~N~~~~s~~~giN~FaDlt~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~Dwr~~----g~v~pV~dQ 155 (369)
+.++|++||+.+.+|++|+| |++++.++++ .+++.++...... .........+||++||||++ +.|+|||||
T Consensus 11 ~~~~i~~~N~~~~~~~~~~n-f~~~~~e~~~-~~lg~~~~~~~~~--~~~~~~~~~~lP~s~DwR~~~~~c~~vtpVkdQ 86 (317)
T 3pbh_A 11 SDELVNYVNKRNTTWQAGHN-FYNVDMSYLK-RLCGTFLGGPKPP--QRVMFTEDLKLPASFDAREQWPQCPTIKEIRDQ 86 (317)
T ss_dssp CHHHHHHHHHHTCSEEECCC-CSSCCHHHHH-HTCCBCTTCCCCS--EEECCCSCCCCCSSEEHHHHCTTCGGGTCCCBC
T ss_pred cHHHHHHHHCCCCCeEEeec-cccCCHHHHH-HHcCCCCCccccC--cccccccccCCCCCEechhccCCCCCcCCcccc
Confidence 35678888877889999999 9988876654 5666654221110 00011123589999999987 689999999
Q ss_pred CCCccHHHHHhhhHHHHHHhhhcCC--ccccChhHhhhcCCCCCCCCCCCCCCCCCCCChHHHHHHHHHcCCcCCCCCc-
Q 017548 156 GACGSCWSFSATGALEGAHFLSTGE--LVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDY- 232 (369)
Q Consensus 156 g~cgsCwAfa~~~~le~~~~~~~~~--~~~lS~q~l~dc~~~~~~~~~~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~y- 232 (369)
|.||||||||++++||++++|+++. .+.||+|+|+||+.. .++.||+||++..|++|+.++ ||++|.+|
T Consensus 87 g~CGSCWAFsa~~ale~~~~i~~~~~~~~~LSeq~LvdC~~~-------~~~~GC~GG~~~~A~~yi~~~-Gi~te~~Y~ 158 (317)
T 3pbh_A 87 GSCGSCWAFGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGS-------MCGDGCNGGYPAEAWNFWTRK-GLVSGGLYE 158 (317)
T ss_dssp CSSCCHHHHHHHHHHHHHHHHHTTTSCCCCBCHHHHHHHSCT-------TTBCGGGCBCHHHHHHHHHHT-CEEBBCSTT
T ss_pred CCccchHHHHHHHHHHHHHHHHhCCCCcccCCHHHHHHhccc-------cCCCCCCCCCHHHHHHHHHHh-CCCcchhcc
Confidence 9999999999999999999999874 789999999999862 247899999999999999988 99999988
Q ss_pred ------ccCCC--------CCCCccCCC--------CCce---------EEeeeeEecCchHHHHHHHHHhcCCeEEEEE
Q 017548 233 ------PYTGT--------DGGSCKFDK--------SKIA---------AAVSNFSVISSDEDQMAANLVKHGPLAVGIN 281 (369)
Q Consensus 233 ------Py~~~--------~~~~c~~~~--------~~~~---------~~i~~~~~~~~~~~~ik~~l~~~gPV~v~~~ 281 (369)
||... ..+.|.... +... ........++.++++||++|+++|||+|+|+
T Consensus 159 ~~~~c~PY~~~~c~~~~~~~~~~C~~~~~~~~c~~~c~~~~~~~~~~~~~~~~~~~~v~~~e~~i~~~i~~~GPV~v~i~ 238 (317)
T 3pbh_A 159 SHVGCRPYSIPPCEHHVNGSRPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVSNSEKDIMAEIYKNGPVEGAFS 238 (317)
T ss_dssp CCCBSSCCCSCCCCCCCTTCCSCCCSCCCCCCCCCSCCSSCCSCGGGSEECBCCCEEECSCHHHHHHHHHHHCCEEEEEE
T ss_pred CCCCCcCcccCcccccccCcCCCCCCcCCCCcccccccCCCccceeeeeeeeeecccCCcHHHHHHHHHHHCCCEEEEEE
Confidence 99842 114554210 0000 1111223456689999999999999999999
Q ss_pred ccc-ccccCCCeeecCCCCCc-CCeEEEEEEecccCCcCCcCCCCCEEEEEcCCCCCCCCCcEEEEEeCCCeecccccee
Q 017548 282 AVW-MQTYIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVS 359 (369)
Q Consensus 282 ~~~-f~~y~~Gi~~~~~~~~~-~~Hav~iVGyg~~~~~~~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~~n~cgi~~~~~ 359 (369)
+.. |++|++|||... |... ++|||+|||||++ +|++|||||||||++|||+|||||+||.|+|||++.++
T Consensus 239 ~~~~f~~Y~~GVy~~~-~~~~~~~HaV~iVGyG~~-------~g~~YWivkNSWG~~WGe~GY~ri~rg~n~CgI~~~~~ 310 (317)
T 3pbh_A 239 VYSDFLLYKSGVYQHV-TGEMMGGHAIRILGWGVE-------NGTPYWLVANSWNTDWGDNGFFKILRGQDHCGIESEVV 310 (317)
T ss_dssp EEGGGGGEEEEEECCC-SCCEEEEEEEEEEEEEEE-------TTEEEEEEECSBCTTSTBTTEEEEECSSCGGGTTTSCE
T ss_pred ecccccCCCCcEEccC-CCCCCCCEEEEEEEEEEe-------CCeeEEEEEcCCCCCcCCCcEEEEEcCCCcccCCCceE
Confidence 865 999999999765 5444 6999999999987 78999999999999999999999999999999999999
Q ss_pred eEEEec
Q 017548 360 SVAAIH 365 (369)
Q Consensus 360 ~~~~~~ 365 (369)
+..|.+
T Consensus 311 a~~p~~ 316 (317)
T 3pbh_A 311 AGIPRT 316 (317)
T ss_dssp ECCBCC
T ss_pred eeecCC
Confidence 887754
No 13
>1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1
Probab=100.00 E-value=2e-66 Score=464.32 Aligned_cols=210 Identities=50% Similarity=0.976 Sum_probs=193.1
Q ss_pred CCCceeccCCCCCCcccCCCCCccHHHHHhhhHHHHHHhhhcCCccccChhHhhhcCCCCCCCCCCCCCCCCCCCChHHH
Q 017548 137 LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSA 216 (369)
Q Consensus 137 lP~~~Dwr~~g~v~pV~dQg~cgsCwAfa~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~~~~~~~~~gC~GG~~~~a 216 (369)
||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||... +.||+||++..|
T Consensus 1 lP~~~DwR~~~~vt~VkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~---------~~gC~GG~~~~a 71 (214)
T 1m6d_A 1 APPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKM---------DKACMGGLPSNA 71 (214)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCSS---------SCTTBCCCHHHH
T ss_pred CCCcCcCCCCCCCCCCccCCCCchHHHHHHHHHHHHHHHHHcCCCcccCHHHHHHhcCC---------CCCCCCCCHHHH
Confidence 79999999999999999999999999999999999999999999999999999999863 789999999999
Q ss_pred HHHHHHcCCcCCCCCcccCCCCCCCccCCCCCceEEeeeeEecCchHHHHHHHHHhcCCeEEEEEcccccccCCCeeecC
Q 017548 217 FEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPY 296 (369)
Q Consensus 217 ~~~~~~~~Gi~~e~~yPy~~~~~~~c~~~~~~~~~~i~~~~~~~~~~~~ik~~l~~~gPV~v~~~~~~f~~y~~Gi~~~~ 296 (369)
++|+.+++|+++|++|||.+.. ..|+....+..+++.++..++.++++||++|+++|||+++|++..|++|++|||.+.
T Consensus 72 ~~~i~~~~Gi~~e~~yPY~~~~-~~C~~~~~~~~~~i~~~~~i~~~~~~ik~~l~~~GPV~v~i~~~~f~~Y~~Giy~~~ 150 (214)
T 1m6d_A 72 YSAIKNLGGLETEDDYSYQGHM-QSCQFSAEKAKVYIQDSVELSQNEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPL 150 (214)
T ss_dssp HHHHHHHTCBCBTTTSCCCSSC-CCCCCCGGGCCBCCSEEEECCSCHHHHHHHHHHHCCEEEEECTHHHHHCCSSEECCC
T ss_pred HHHHHHhcCcccccCcCcCCCC-CcCCCCcccceEEecCEEEeChHHHHHHHHHHhCCCEEEEEEechhhhcCCceecCC
Confidence 9999887799999999999887 889877666567788888888889999999999999999999877899999999763
Q ss_pred --CCCCc-CCeEEEEEEecccCCcCCcCCCCCEEEEEcCCCCCCCCCcEEEEEeCCCeeccccceeeEEE
Q 017548 297 --ICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAA 363 (369)
Q Consensus 297 --~~~~~-~~Hav~iVGyg~~~~~~~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~~n~cgi~~~~~~~~~ 363 (369)
.|+.. ++|||+|||||++ ++++|||||||||++|||+|||||+|+.|.|||+++++.+.+
T Consensus 151 ~~~c~~~~~~HaV~iVGyg~~-------~g~~yWivkNSWG~~WGe~Gy~~i~r~~n~Cgi~~~~~~~~~ 213 (214)
T 1m6d_A 151 RPLCSPWLIDHAVLLVGYGQR-------SDVPFWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVV 213 (214)
T ss_dssp GGGSCTTCCCEEEEEEEEEEE-------TTEEEEEEECSBCTTSTBTTEEEEESSSCGGGTTTTCEEEEC
T ss_pred CCcCCCCcCCEEEEEEEEeec-------CCcEEEEEEeCCCCCcccCcEEEEEcCCCccccCceeEEEEe
Confidence 47654 8999999999987 688999999999999999999999999999999999988763
No 14
>3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} SCOP: d.3.1.1 PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ...
Probab=100.00 E-value=1.2e-65 Score=459.51 Aligned_cols=209 Identities=49% Similarity=0.904 Sum_probs=190.1
Q ss_pred CCCceeccCCCCCCcccCCCCCccHHHHHhhhHHHHHHhhhcCCccccChhHhhhcCCCCCCCCCCCCCCCCCCCChHHH
Q 017548 137 LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSA 216 (369)
Q Consensus 137 lP~~~Dwr~~g~v~pV~dQg~cgsCwAfa~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~~~~~~~~~gC~GG~~~~a 216 (369)
||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||+.. +.||+||++..|
T Consensus 1 lP~~~Dwr~~g~vtpVkdQg~cGsCWAfa~~~ale~~~~i~~~~~~~lS~q~l~dC~~~---------~~gC~GG~~~~a 71 (215)
T 3i06_A 1 APAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKT---------DSGCSGGLMNNA 71 (215)
T ss_dssp CCSEEEGGGGTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHTTSCCCCCCHHHHHHHCSS---------SCGGGCCCHHHH
T ss_pred CCCcccCCcCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHhCCCCCccCHHHHhccCCC---------CCCCCCCCHHHH
Confidence 79999999999999999999999999999999999999999999999999999999863 789999999999
Q ss_pred HHHHHHc--CCcCCCCCcccCCCC--CCCccCCCCCceEEeeeeEecCchHHHHHHHHHhcCCeEEEEEcccccccCCCe
Q 017548 217 FEYILKA--GGVEREKDYPYTGTD--GGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGV 292 (369)
Q Consensus 217 ~~~~~~~--~Gi~~e~~yPy~~~~--~~~c~~~~~~~~~~i~~~~~~~~~~~~ik~~l~~~gPV~v~~~~~~f~~y~~Gi 292 (369)
++|+.++ +|+++|++|||.... .+.|+.......+++++|..++.++++||++|+++|||+++|++..|++|++||
T Consensus 72 ~~y~~~~~~gGi~~e~~yPY~~~~~~~~~C~~~~~~~~~~i~~~~~v~~~~~~ik~~l~~~gPV~v~~~~~~f~~Y~~Gi 151 (215)
T 3i06_A 72 FEWIVQENNGAVYTEDSYPYASGEGISPPCTTSGHTVGATITGHVELPQDEAQIAAWLAVNGPVAVAVDASSWMTYTGGV 151 (215)
T ss_dssp HHHHHHHSTTEEEC-CCSCCCCTTSCCCCCCCSSCCEEEEEEEEEECCSCHHHHHHHHHHHCCEEEEECCTTGGGCCSSE
T ss_pred HHHHHHhccccccccCccCCcCCCCCCCccccCCcccceEecceEEeCChHHHHHHHHHHCCCEEEEEEchHHhcCCCCc
Confidence 9999885 579999999999754 247987776667889999999889999999999999999999986699999999
Q ss_pred eecCCCCC-cCCeEEEEEEecccCCcCCcCCCCCEEEEEcCCCCCCCCCcEEEEEeCCCeeccccceeeEEE
Q 017548 293 SCPYICGK-YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAA 363 (369)
Q Consensus 293 ~~~~~~~~-~~~Hav~iVGyg~~~~~~~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~~n~cgi~~~~~~~~~ 363 (369)
|. .|.. .++|||+|||||++ ++++|||||||||++|||+|||||+||.|+|||+++++++.+
T Consensus 152 y~--~~~~~~~~HaV~iVGyg~~-------~g~~yWivkNSWG~~WGe~Gy~~i~rg~n~cgi~~~~~~~~~ 214 (215)
T 3i06_A 152 MT--SCVSEQLDHGVLLVGYNDS-------AAVPYWIIKNSWTTQWGEEGYIRIAKGSNQCLVKEEASSAVV 214 (215)
T ss_dssp EC--SCCCSCCCEEEEEEEEESS-------SSSCEEEEECSBCTTSTBTTEEEEESSSCGGGTTSSEEEEEE
T ss_pred cc--CCCCCccCcEEEEEEEecc-------CCcEEEEEECCCCCCcccCceEEEecCCCeecCCCceeEEec
Confidence 96 3543 48999999999987 688999999999999999999999999999999999998764
No 15
>3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ...
Probab=100.00 E-value=8e-66 Score=461.16 Aligned_cols=209 Identities=44% Similarity=0.850 Sum_probs=195.0
Q ss_pred CCCceeccCCCCCCcccCCCCCccHHHHHhhhHHHHHHhhhcCCccccChhHhhhcCCCCCCCCCCCCCCCCCCCChHHH
Q 017548 137 LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSA 216 (369)
Q Consensus 137 lP~~~Dwr~~g~v~pV~dQg~cgsCwAfa~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~~~~~~~~~gC~GG~~~~a 216 (369)
||++||||++|+|+||||||.||||||||+++++|+++++++++.++||+|+|+||+.. +.||+||++..|
T Consensus 1 lP~~~Dwr~~~~v~pvkdQg~cGsCWAfa~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~---------~~gC~GG~~~~a 71 (215)
T 3kwz_A 1 APDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE---------NDGCGGGYMTNA 71 (215)
T ss_dssp CTTCEETTTTTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTT---------SCTTBCCCHHHH
T ss_pred CCCCCccCcCCCCCCcccCCCCcHHHHHHHHHHHHHHHHHHcCCCcccCHHHHHHhcCC---------CCCCCCCCHHHH
Confidence 79999999999999999999999999999999999999999999999999999999863 789999999999
Q ss_pred HHHHHHcCCcCCCCCcccCCCCCCCccCCCCCceEEeeeeEecCc-hHHHHHHHHHhcCCeEEEEEcc--cccccCCCee
Q 017548 217 FEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISS-DEDQMAANLVKHGPLAVGINAV--WMQTYIGGVS 293 (369)
Q Consensus 217 ~~~~~~~~Gi~~e~~yPy~~~~~~~c~~~~~~~~~~i~~~~~~~~-~~~~ik~~l~~~gPV~v~~~~~--~f~~y~~Gi~ 293 (369)
++|+.+++|+++|++|||.+.+ +.|+..+.....++++|..++. ++++||++|+++|||+++|++. .|++|++|||
T Consensus 72 ~~~~~~~~Gi~~e~~yPY~~~~-~~C~~~~~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Giy 150 (215)
T 3kwz_A 72 FQYVQKNRGIDSEDAYPYVGQE-ESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVY 150 (215)
T ss_dssp HHHHHHHTCEEBTTTSCCCSSC-CCCCCCGGGEEECCCCEEECCTTCHHHHHHHHHHTCCEEEEECCCSHHHHTCCSSEE
T ss_pred HHHHHHhCCccccccCCCccCC-CccccCCCCceeEecceEEeCCCCHHHHHHHHHHCCCEEEEEeechhhhhcccCCeE
Confidence 9999988899999999999988 8999877777788899999986 7899999999999999999987 3999999999
Q ss_pred ecCCCCC-cCCeEEEEEEecccCCcCCcCCCCCEEEEEcCCCCCCCCCcEEEEEeCC-CeeccccceeeEE
Q 017548 294 CPYICGK-YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVSSVA 362 (369)
Q Consensus 294 ~~~~~~~-~~~Hav~iVGyg~~~~~~~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~~-n~cgi~~~~~~~~ 362 (369)
..+.|+. .++|||+|||||++ ++++|||||||||++|||+|||||+|+. |+|||+++++.+.
T Consensus 151 ~~~~~~~~~~~HaV~iVGyg~~-------~g~~yWivkNSWG~~WG~~Gy~~i~r~~~n~Cgi~~~~~~p~ 214 (215)
T 3kwz_A 151 YDESCNSDNLNHAVLAVGYGIQ-------KGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPK 214 (215)
T ss_dssp CCTTCCTTCCCEEEEEEEEEEE-------TTEEEEEEECSBCTTSTBTTEEEEESSSSSGGGTTSSCEEEC
T ss_pred CCCCCCCChhhCEEEEEEEecc-------CCceEEEEECCcCcccccCCEEEEecCCCCccCcCCceeeee
Confidence 9888864 59999999999987 6889999999999999999999999997 8999999998764
No 16
>8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A*
Probab=100.00 E-value=7.2e-66 Score=463.04 Aligned_cols=213 Identities=44% Similarity=0.860 Sum_probs=197.3
Q ss_pred CCCceeccCCC-CCCcccCCCCCccHHHHHhhhHHHHHHhhhcCCccccChhHhhhcCCCCCCCCCCCCCCCCCCCChHH
Q 017548 137 LPTDFDWRDHG-AVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNS 215 (369)
Q Consensus 137 lP~~~Dwr~~g-~v~pV~dQg~cgsCwAfa~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~~~~~~~~~gC~GG~~~~ 215 (369)
||++||||++| +|+||||||.||||||||++++||+++++++++.++||+|+|+||+.. ..+.||+||++..
T Consensus 1 lP~~~DwR~~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dc~~~-------~~~~gC~GG~~~~ 73 (220)
T 8pch_A 1 YPPSMDWRKKGNFVSPVKNQGSCGSCWTFSTTGALESAVAIATGKMLSLAEQQLVDCAQN-------FNNHGCQGGLPSQ 73 (220)
T ss_dssp CCSCEEHHHHSSCSCCCCBCTTSCCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHGGG-------GTCCGGGCCCHHH
T ss_pred CCCCEecCcCCCcCCcccccCCCchHHHHHHHHHHHHHHHHHcCCCCCCCHHHHhhCcCc-------cCCCCCCCCCHHH
Confidence 79999999999 899999999999999999999999999999999999999999999863 2378999999999
Q ss_pred HHHHHHHcCCcCCCCCcccCCCCCCCccCCCCCceEEeeeeEecCc-hHHHHHHHHHhcCCeEEEEEccc-ccccCCCee
Q 017548 216 AFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISS-DEDQMAANLVKHGPLAVGINAVW-MQTYIGGVS 293 (369)
Q Consensus 216 a~~~~~~~~Gi~~e~~yPy~~~~~~~c~~~~~~~~~~i~~~~~~~~-~~~~ik~~l~~~gPV~v~~~~~~-f~~y~~Gi~ 293 (369)
|++|+.+++|+++|++|||.+.. +.|+..+....+++++|..++. ++++||++|+++|||++++++.. |+.|++|||
T Consensus 74 a~~~~~~~~Gi~~e~~yPY~~~~-~~C~~~~~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~~~~~~~~~f~~Y~~Giy 152 (220)
T 8pch_A 74 AFEYIRYNKGIMGEDTYPYKGQD-DHCKFQPDKAIAFVKDVANITMNDEEAMVEAVALYNPVSFAFEVTNDFLMYRKGIY 152 (220)
T ss_dssp HHHHHHHHTCEEBTTTSCCCSSC-CCCCCCGGGEEECEEEEEECCTTCHHHHHHHHHHTCCEEEEECCCHHHHTCCSSEE
T ss_pred HHHHHHHcCCcCcccccCccCCC-CCCCCCCCcceEEeCCEEEeCCCCHHHHHHHHHhcCCEEEEEEeccchhhcCCCcc
Confidence 99999988899999999999987 8999887777788899998875 78999999999999999999885 999999999
Q ss_pred ecCCCCC---cCCeEEEEEEecccCCcCCcCCCCCEEEEEcCCCCCCCCCcEEEEEeCCCeeccccceeeEEEe
Q 017548 294 CPYICGK---YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAI 364 (369)
Q Consensus 294 ~~~~~~~---~~~Hav~iVGyg~~~~~~~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~~n~cgi~~~~~~~~~~ 364 (369)
.++.|.. .++|||+|||||++ ++++|||||||||++|||+|||||+|+.|+|||+++++.+.|.
T Consensus 153 ~~~~~~~~~~~~~HaV~iVGyg~~-------~g~~yWivkNSWG~~WGe~Gy~~i~r~~n~cgi~~~~~~~~p~ 219 (220)
T 8pch_A 153 SSTSCHKTPDKVNHAVLAVGYGEE-------NGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASYPIPL 219 (220)
T ss_dssp CCSSCCCSTTTCCEEEEEEEEEEE-------TTEEEEEEECSBCTTSTBTTEEEEECSSCGGGTTTSCEEEEEC
T ss_pred cCCcCCCCCCcCCcEEEEEEEEcc-------CCeeEEEEECCCCcCcccCCEEEEEcCCCccccCCCceeEeec
Confidence 9888865 48999999999987 6889999999999999999999999999999999999988774
No 17
>3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} SCOP: d.3.1.1 PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ...
Probab=100.00 E-value=1.2e-65 Score=461.01 Aligned_cols=212 Identities=44% Similarity=0.895 Sum_probs=195.6
Q ss_pred CCCceeccCCCCCCcccCCCCCccHHHHHhhhHHHHHHhhhcCCccccChhHhhhcCCCCCCCCCCCCCCCCCCCChHHH
Q 017548 137 LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSA 216 (369)
Q Consensus 137 lP~~~Dwr~~g~v~pV~dQg~cgsCwAfa~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~~~~~~~~~gC~GG~~~~a 216 (369)
||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||+.. ...+.||+||++..|
T Consensus 2 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~~c~~~------~~~~~gC~GG~~~~a 75 (218)
T 3ovx_A 2 LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTE------KYGNKGCNGGFMTTA 75 (218)
T ss_dssp CCSCEEGGGGTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHSCG------GGTCCGGGCCCHHHH
T ss_pred CCCCCCcccCCCCCCCccCCCCccHHHHHHHHHHHHHHHHHcCCccccCHHHheeccCC------cCCCCCCCCCCHHHH
Confidence 79999999999999999999999999999999999999999999999999999999831 013789999999999
Q ss_pred HHHHHHcCCcCCCCCcccCCCCCCCccCCCCCceEEeeeeEecCc-hHHHHHHHHHhcCCeEEEEEccc--ccccCCCee
Q 017548 217 FEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISS-DEDQMAANLVKHGPLAVGINAVW--MQTYIGGVS 293 (369)
Q Consensus 217 ~~~~~~~~Gi~~e~~yPy~~~~~~~c~~~~~~~~~~i~~~~~~~~-~~~~ik~~l~~~gPV~v~~~~~~--f~~y~~Gi~ 293 (369)
++|+.+++|+++|++|||.+.. +.|+........++.+|..++. ++++||++|+++|||++++++.. |++|++|||
T Consensus 76 ~~~~~~~~Gi~~e~~yPY~~~~-~~C~~~~~~~~~~i~~~~~~~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Giy 154 (218)
T 3ovx_A 76 FQYIIDNKGIDSDASYPYKAMD-QKCQYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVY 154 (218)
T ss_dssp HHHHHHHTCEEBTTTSCCCSSC-CCCCCCGGGEEECCCEEEECCTTCHHHHHHHHHHTCCEEEEECCCSHHHHHCCSSEE
T ss_pred HHHHHHhCCcCcccccCccCCC-CcccCCCccceeeeccEEEeCCCCHHHHHHHHHhcCCEEEEEEecchhhhcccCcee
Confidence 9999886799999999999988 8999887777788899998876 78999999999999999999864 999999999
Q ss_pred ecCCCCCcCCeEEEEEEecccCCcCCcCCCCCEEEEEcCCCCCCCCCcEEEEEeCC-CeeccccceeeEE
Q 017548 294 CPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVSSVA 362 (369)
Q Consensus 294 ~~~~~~~~~~Hav~iVGyg~~~~~~~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~~-n~cgi~~~~~~~~ 362 (369)
..+.|...++|||+|||||++ ++++|||||||||++|||+|||||+|+. |+|||+++++.+.
T Consensus 155 ~~~~~~~~~~HaV~iVGyg~~-------~g~~ywivkNSWG~~WG~~Gy~~i~~~~~n~cgi~~~~~~p~ 217 (218)
T 3ovx_A 155 YEPSCTQNVNHGVLVVGYGDL-------NGKEYWLVKNSWGHNFGEEGYIRMARNKGNHCGIASFPSYPE 217 (218)
T ss_dssp CCTTCCSCCCEEEEEEEEEEE-------TTEEEEEEECSBCTTSTBTTEEEEECSSSSGGGTTTSCEEEE
T ss_pred cCCCCCcccCcEEEEEEEecc-------CCceEEEEECCCCCccccCCEEEEecCCCCcccccCceeeee
Confidence 988897779999999999987 6889999999999999999999999997 9999999998765
No 18
>2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ...
Probab=100.00 E-value=3.3e-65 Score=458.46 Aligned_cols=215 Identities=46% Similarity=0.881 Sum_probs=193.4
Q ss_pred CCCceeccCCCCCCcccCCCCCccHHHHHhhhHHHHHHhhhcCCccccChhHhhhcCCCCCCCCCCCCCCCCCCCChHHH
Q 017548 137 LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSA 216 (369)
Q Consensus 137 lP~~~Dwr~~g~v~pV~dQg~cgsCwAfa~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~~~~~~~~~gC~GG~~~~a 216 (369)
||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||+.. ..+.||+||++..|
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~-------~g~~gC~GG~~~~a 73 (220)
T 2xu3_A 1 APRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGP-------QGNEGCNGGLMDYA 73 (220)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTT-------TTCCTTBCCCHHHH
T ss_pred CCCcEeCCCCCCCCCCcccCcccHHHHHHhHHHHHHHHHHhcCCceecCHHHHHhhccC-------CCCCCCCCCCHHHH
Confidence 79999999999999999999999999999999999999999999999999999999864 13789999999999
Q ss_pred HHHHHHcCCcCCCCCcccCCCCCCCccCCCCCceEEeeeeEecCchHHHHHHHHHhcCCeEEEEEccc--ccccCCCeee
Q 017548 217 FEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSC 294 (369)
Q Consensus 217 ~~~~~~~~Gi~~e~~yPy~~~~~~~c~~~~~~~~~~i~~~~~~~~~~~~ik~~l~~~gPV~v~~~~~~--f~~y~~Gi~~ 294 (369)
++|+.++.|+++|++|||.+.+ +.|+..+....+++++|..++.++++||++|+++|||+++|++.. |++|++|||.
T Consensus 74 ~~y~~~~~Gi~~e~~yPY~~~~-~~C~~~~~~~~~~i~~~~~v~~~~~~ik~~l~~~GPV~v~~~~~~~~f~~Y~~Gvy~ 152 (220)
T 2xu3_A 74 FQYVQDNGGLDSEESYPYEATE-ESCKYNPKYSVANDTGFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYF 152 (220)
T ss_dssp HHHHHHHTCEEBTTTSCCCSSC-CCCCCCGGGEEECCSEEEECCSCHHHHHHHHHHTCCEEEEECCCSHHHHTCCSSEEC
T ss_pred HHHHHHhCCcccccccCCcccC-cCccCCCCCcceeeeeEEEeCCCHHHHHHHHHhcCCEEEEEeecCcccccccceEEc
Confidence 9999755699999999999987 899887666678889999888789999999999999999999873 9999999998
Q ss_pred cCCCCC-cCCeEEEEEEecccCCcCCcCCCCCEEEEEcCCCCCCCCCcEEEEEeCC-CeeccccceeeEE
Q 017548 295 PYICGK-YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVSSVA 362 (369)
Q Consensus 295 ~~~~~~-~~~Hav~iVGyg~~~~~~~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~~-n~cgi~~~~~~~~ 362 (369)
.+.|+. .++|||+|||||++.. ..++++|||||||||++|||+|||||+|+. |+|||+++++.+.
T Consensus 153 ~~~c~~~~~~HaV~iVGygd~~~---~~~g~~yWivkNSWG~~WG~~Gy~~i~~~~~n~Cgi~~~~~~p~ 219 (220)
T 2xu3_A 153 EPDCSSEDMDHGVLVVGYGFEST---ESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPT 219 (220)
T ss_dssp CTTCCSSCCCEEEEEEEEEECCC---SSSCCEEEEEECSBCTTSTBTTEEEEECSSSSGGGTTTSCEEEE
T ss_pred CCCCCCCCCCeEEEEEEcCCccc---cCCCCcEEEEEeCCCCCcccCcEEEEecCCCCcCCccccceeee
Confidence 777876 5899999999994310 016889999999999999999999999997 8999999998764
No 19
>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1
Probab=100.00 E-value=1.6e-64 Score=453.97 Aligned_cols=209 Identities=41% Similarity=0.887 Sum_probs=190.8
Q ss_pred CCCCceeccCCCCCCcccCCCCCccHHHHHhhhHHHHHHhhhcCCccccChhHhhhcCCCCCCCCCCCCCCCCCCCChHH
Q 017548 136 DLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNS 215 (369)
Q Consensus 136 ~lP~~~Dwr~~g~v~pV~dQg~cgsCwAfa~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~~~~~~~~~gC~GG~~~~ 215 (369)
+||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||+.. +.||+||++..
T Consensus 2 ~lP~~~DwR~~~~v~~VkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~---------~~gC~GG~~~~ 72 (221)
T 1cqd_A 2 DLPDSIDWRENGAVVPVKNQGGCGSCWAFSTVAAVEGINQIVTGDLISLSEQQLVDCTTA---------NHGCRGGWMNP 72 (221)
T ss_dssp -CCSCEETTTTTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTT---------SCTTBCCCHHH
T ss_pred CCCCcCcCCCCCCcCCcccCCCCccHHHHHHHHHHHHHHHHhcCCeeeeccceeEECCCC---------CCCCCCCCHHH
Confidence 589999999999999999999999999999999999999999999999999999999864 78999999999
Q ss_pred HHHHHHHcCCcCCCCCcccCCCCCCCccCCCCCceEEeeeeEecCc-hHHHHHHHHHhcCCeEEEEEcc--cccccCCCe
Q 017548 216 AFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISS-DEDQMAANLVKHGPLAVGINAV--WMQTYIGGV 292 (369)
Q Consensus 216 a~~~~~~~~Gi~~e~~yPy~~~~~~~c~~~~~~~~~~i~~~~~~~~-~~~~ik~~l~~~gPV~v~~~~~--~f~~y~~Gi 292 (369)
|++|+.+++|+++|++|||.+.+ +.|+.......+++++|..++. ++++||++|.+ |||+++|++. .|+.|++||
T Consensus 73 a~~y~~~~~Gi~~e~~yPY~~~~-~~C~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~-GPV~v~i~~~~~~f~~Y~~Gi 150 (221)
T 1cqd_A 73 AFQFIVNNGGINSEETYPYRGQD-GICNSTVNAPVVSIDSYENVPSHNEQSLQKAVAN-QPVSVTMDAAGRDFQLYRSGI 150 (221)
T ss_dssp HHHHHHHHTSBCBTTTSCCCSSC-CCCCSSSCCCSBCCSEEEECCSSCHHHHHHHHTT-SCEEEEECCCSHHHHTCCSSE
T ss_pred HHHHHHHhCCccccccCCccCCC-CCcCCCCCCceEEeccEEEeCCchHHHHHHHHHh-CCEEEEEeccCcccccccCcc
Confidence 99999988899999999999887 8898776666688899988876 68899999865 9999999987 399999999
Q ss_pred eecCCCCCcCCeEEEEEEecccCCcCCcCCCCCEEEEEcCCCCCCCCCcEEEEEeC----CCeeccccceeeEEE
Q 017548 293 SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMG----RNVCGVDSMVSSVAA 363 (369)
Q Consensus 293 ~~~~~~~~~~~Hav~iVGyg~~~~~~~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~----~n~cgi~~~~~~~~~ 363 (369)
|.+ .|...++|||+|||||++ ++++|||||||||++|||+|||||+|+ .|.|||+++++.+..
T Consensus 151 y~~-~~~~~~~HaV~iVGyg~~-------~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~~p~~ 217 (221)
T 1cqd_A 151 FTG-SCNISANHALTVVGYGTE-------NDKDFWIVKNSWGKNWGESGYIRAERNIENPDGKCGITRFASYPVK 217 (221)
T ss_dssp ECC-CCCCCCCEEEEEEEEEEE-------TTEEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSSCEEEEC
T ss_pred ccC-CCCCcCCeEEEEEEEccc-------CCCcEEEEEeCCCCCcccCCEEEEEcCCCCCCcccceeeeeeEEEe
Confidence 986 687779999999999987 689999999999999999999999998 389999999987763
No 20
>2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A*
Probab=100.00 E-value=2.5e-64 Score=459.20 Aligned_cols=211 Identities=43% Similarity=0.825 Sum_probs=192.5
Q ss_pred CCCCceeccCCCCCCcccCCCCCccHHHHHhhhHHHHHHhhhcCCccccChhHhhhcCCCCCCCCCCCCCCCCCCCChHH
Q 017548 136 DLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNS 215 (369)
Q Consensus 136 ~lP~~~Dwr~~g~v~pV~dQg~cgsCwAfa~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~~~~~~~~~gC~GG~~~~ 215 (369)
+||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||+.. +.||+||++..
T Consensus 1 ~lP~~~DwR~~g~vtpVkdQg~CGsCWAfa~~~~lE~~~~i~~g~~~~LS~q~lvdC~~~---------~~gC~GG~~~~ 71 (246)
T 2b1m_A 1 DAPESWDWSKKGVITKVKFQGQCGSGWAFSATGAIEAAHAIATGNLVSLSEQELIDCVDE---------SEGCYNGWHYQ 71 (246)
T ss_dssp -CCSCEEGGGTTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTT---------SBTTTBCCHHH
T ss_pred CCCCcCCCCCCCCCCCcccCCCCchHHHHHHHHHHHHHHHHHcCCCcccCHHHHHhhcCC---------CCCCCCCCHHH
Confidence 489999999999999999999999999999999999999999999999999999999852 78999999999
Q ss_pred HHHHHHHcCCcCCCCCcccCCCCCCCccCCCCCceEEeeee---EecCc-hHHHHHHHHHh---cCCeEEEEEccccccc
Q 017548 216 AFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNF---SVISS-DEDQMAANLVK---HGPLAVGINAVWMQTY 288 (369)
Q Consensus 216 a~~~~~~~~Gi~~e~~yPy~~~~~~~c~~~~~~~~~~i~~~---~~~~~-~~~~ik~~l~~---~gPV~v~~~~~~f~~y 288 (369)
|++|+.+++|+++|++|||.+.. +.|+.......+++++| ..++. ++++||++|++ +|||+++|++..|++|
T Consensus 72 a~~y~~~~~Gi~~e~~yPY~~~~-~~C~~~~~~~~~~i~~y~~~~~v~~~~~~~ik~~l~~~~~~GPV~v~i~~~~f~~Y 150 (246)
T 2b1m_A 72 SFEWVVKHGGIASEADYPYKARD-GKCKANEIQDKVTIDNYGVQILSNESTESEAESSLQSFVLEQPISVSIDAKDFHFY 150 (246)
T ss_dssp HHHHHHHTTCBCBTTTSCCCSSC-CCCCGGGCCCCBCCSEEEEEECCTTSCHHHHHHHHHHHHHHSCEEEEECCTTGGGC
T ss_pred HHHHHHHhCCcCccccccccCCC-CcCcCCCCCCceeEcCcceeeecCCChHHHHHHHHHhhccCCCEEEEEEcchhhcc
Confidence 99999988799999999999887 89987655556788888 77764 78899999998 6999999999449999
Q ss_pred CCCeeecCCCCCc--CCeEEEEEEecccCCcCCcCCCCCEEEEEcCCCCCCCCCcEEEEEeCC----CeeccccceeeEE
Q 017548 289 IGGVSCPYICGKY--LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR----NVCGVDSMVSSVA 362 (369)
Q Consensus 289 ~~Gi~~~~~~~~~--~~Hav~iVGyg~~~~~~~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~~----n~cgi~~~~~~~~ 362 (369)
++|||..+.|+.. ++|||+|||||++ ++++|||||||||++|||+|||||+|+. |+|||++.++.+.
T Consensus 151 ~~Giy~~~~c~~~~~~~HaV~iVGyg~~-------~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~n~CgI~~~~~~p~ 223 (246)
T 2b1m_A 151 SGGIYDGGNCSSPYGINHFVLIVGYGSE-------DGVDYWIAKNSWGEDWGIDGYIRIQRNTGNLLGVCGMNYFASYPI 223 (246)
T ss_dssp CSSEECCTTCCSSCCCCEEEEEEEEEEE-------TTEEEEEEECSBCTTSTBTTEEEEECCSSCTTCGGGTTSEEEEEE
T ss_pred cceeecCCCCCCCCcCceEEEEEEEecc-------CCceEEEEEeCCCCcccCCcEEEEEcCCCCCCccccccceeeEEE
Confidence 9999988778775 8999999999987 6889999999999999999999999997 8999999998776
Q ss_pred E
Q 017548 363 A 363 (369)
Q Consensus 363 ~ 363 (369)
.
T Consensus 224 ~ 224 (246)
T 2b1m_A 224 I 224 (246)
T ss_dssp C
T ss_pred e
Confidence 4
No 21
>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1
Probab=100.00 E-value=3.6e-64 Score=449.57 Aligned_cols=206 Identities=42% Similarity=0.900 Sum_probs=188.5
Q ss_pred CCCceeccCCCCCCcccCCCCCccHHHHHhhhHHHHHHhhhcCCccccChhHhhhcCCCCCCCCCCCCCCCCCCCChHHH
Q 017548 137 LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSA 216 (369)
Q Consensus 137 lP~~~Dwr~~g~v~pV~dQg~cgsCwAfa~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~~~~~~~~~gC~GG~~~~a 216 (369)
||++||||++|+|+||||||.||||||||+++++|+++++++++.++||+|+|+||+.. +.||+||++..|
T Consensus 1 lP~~~DwR~~~~v~~VkdQg~cGsCWAfa~~~~~e~~~~i~~g~~~~lS~q~l~dC~~~---------~~gC~GG~~~~a 71 (215)
T 1iwd_A 1 LPSFVDWRSKGAVNSIKNQKQCGSCWAFSAVAAVESINKIRTGQLISLSEQELVDCDTA---------SHGCNGGWMNNA 71 (215)
T ss_dssp CCSCEEGGGGTCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTT---------SCTTBCCCHHHH
T ss_pred CCCcEeCCCCCCCCCcccCCCCchHHHHHHHHHHHHHHHHhcCCccccChhHeEECcCC---------CCCCCCCCHHHH
Confidence 79999999999999999999999999999999999999999999999999999999863 789999999999
Q ss_pred HHHHHHcCCcCCCCCcccCCCCCCCccCCCCCceEEeeeeEecCc-hHHHHHHHHHhcCCeEEEEEccc--ccccCCCee
Q 017548 217 FEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISS-DEDQMAANLVKHGPLAVGINAVW--MQTYIGGVS 293 (369)
Q Consensus 217 ~~~~~~~~Gi~~e~~yPy~~~~~~~c~~~~~~~~~~i~~~~~~~~-~~~~ik~~l~~~gPV~v~~~~~~--f~~y~~Gi~ 293 (369)
++|+.+++|+++|++|||.+.+ +.|+.... ..+++++|..++. ++++||++|.+ |||+++|++.. |+.|++|||
T Consensus 72 ~~~~~~~~Gi~~e~~yPY~~~~-~~C~~~~~-~~~~i~~~~~v~~~~~~~ik~~l~~-GPV~v~i~~~~~~f~~Y~~Gvy 148 (215)
T 1iwd_A 72 FQYIITNGGIDTQQNYPYSAVQ-GSCKPYRL-RVVSINGFQRVTRNNESALQSAVAS-QPVSVTVEAAGAPFQHYSSGIF 148 (215)
T ss_dssp HHHHHHHTCBCBTTTSCCCSSC-CCCCTTCC-CCBCCCEEEECCTTCHHHHHHHHHH-SCEEEEECCCSHHHHTCCSSEE
T ss_pred HHHHHHhCCcccccccCccCCC-CCCCCCCC-ceEEeCcEEEeCCCcHHHHHHHHHh-CCEEEEEecCCcchhhcCCceE
Confidence 9999988799999999999887 88987653 4678888988875 68899999876 99999999864 999999999
Q ss_pred ecCCCCCcCCeEEEEEEecccCCcCCcCCCCCEEEEEcCCCCCCCCCcEEEEEeCC----CeeccccceeeEE
Q 017548 294 CPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR----NVCGVDSMVSSVA 362 (369)
Q Consensus 294 ~~~~~~~~~~Hav~iVGyg~~~~~~~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~~----n~cgi~~~~~~~~ 362 (369)
.+ .|...++|||+|||||++ ++++|||||||||++|||+|||||+|+. |+|||+++++.+.
T Consensus 149 ~~-~c~~~~~HaV~iVGyg~~-------~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~ 213 (215)
T 1iwd_A 149 TG-PCGTAQNHGVVIVGYGTQ-------SGKNYWIVRNSWGQNWGNQGYIWMERNVASSAGLCGIAQLPSYPT 213 (215)
T ss_dssp CC-CCCCCCCEEEEEEEEEEE-------TTEEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSSCEEEE
T ss_pred CC-CCCCcCCEEEEEEEEecc-------CCccEEEEEeCCCCCcCCCcEEEEEcCCCCCCCCCCccccceeee
Confidence 76 587778999999999987 6899999999999999999999999996 8999999998875
No 22
>3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} SCOP: d.3.1.0
Probab=100.00 E-value=1.7e-64 Score=454.23 Aligned_cols=208 Identities=44% Similarity=0.894 Sum_probs=186.2
Q ss_pred CCCceeccCCCCCCcccCCCCCccHHHHHhhhHHHHHHhhhcCCccccChhHhhhcCCCCCCCCCCCCCCCCCCCChHHH
Q 017548 137 LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSA 216 (369)
Q Consensus 137 lP~~~Dwr~~g~v~pV~dQg~cgsCwAfa~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~~~~~~~~~gC~GG~~~~a 216 (369)
||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||+.. +.||+||++..|
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGSCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~---------~~gC~GG~~~~a 71 (222)
T 3u8e_A 1 APASIDWRKKGAVTSVKDQGACGMCWAFGATGAIEGIDAITTGRLISVSEQQIVDCDTX---------XXXXXGGDADDA 71 (222)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSCSSCTTTTHHHHHHHHHHHHHSCCCCBCHHHHHHHCC---------------CCCHHHH
T ss_pred CCCcCcCCcCCCCCCcccCCCCccHHHHHHHHHHHHHHHHHcCCCcccCHHHHHhccCc---------ccccCCCCHHHH
Confidence 79999999999999999999999999999999999999999999999999999999874 789999999999
Q ss_pred HHHHHHcCCcCCCCCcccCCCCCCCccCCCCCceEEeeeeEecCchHHHHHHHHHhcCCeEEEEEccc--ccccCC-Cee
Q 017548 217 FEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIG-GVS 293 (369)
Q Consensus 217 ~~~~~~~~Gi~~e~~yPy~~~~~~~c~~~~~~~~~~i~~~~~~~~~~~~ik~~l~~~gPV~v~~~~~~--f~~y~~-Gi~ 293 (369)
++|+.+++|+++|++|||.+.. +.|+..... .+++++|..++.++++||++| .+|||+++|++.. |++|++ |||
T Consensus 72 ~~~~~~~~Gi~~e~~yPY~~~~-~~C~~~~~~-~~~i~~~~~v~~~~~~i~~~l-~~GPV~v~i~~~~~~f~~Y~~~Giy 148 (222)
T 3u8e_A 72 FRWVITNGGIASDANYPYTGVD-GTCDLNKPI-AARIDGYTNVPNSSSALLDAV-AKQPVSVNIYTSSTSFQLYTGPGIF 148 (222)
T ss_dssp HHHHHHHTCBCBTTTSCCCSSC-CCCCCCSCC-CBCCCEEEECCSCHHHHHHHH-HHSCEEEEECCCSHHHHTCCCSSCB
T ss_pred HHHHHHcCCccchhcCCCcccC-CccccCCCC-eEEEccEEEeCCcHHHHHHHH-hCCCEEEEEEecChhhhcEeCCceE
Confidence 9999998899999999999887 889876555 678889999987889999999 5699999999863 999999 999
Q ss_pred ecCCCCC---cCCeEEEEEEecccCCcCCcCCCCCEEEEEcCCCCCCCCCcEEEEEeCCC----eeccccceeeEE
Q 017548 294 CPYICGK---YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRN----VCGVDSMVSSVA 362 (369)
Q Consensus 294 ~~~~~~~---~~~Hav~iVGyg~~~~~~~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~~n----~cgi~~~~~~~~ 362 (369)
....|.. .++|||+|||||++. ++++|||||||||++|||+|||||+|+.| +|||+++++.+.
T Consensus 149 ~~~~~~~~~~~~~HaV~iVGyg~~~------~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~g~Cgi~~~~~~p~ 218 (222)
T 3u8e_A 149 AGSSCSDDPATVDHTVLIVGYGSNG------TNADYWIVKNSWGTEWGIDGYILIRRNTNRPDGVCAIDAWGSYPT 218 (222)
T ss_dssp CCTTCCCCGGGCCEEEEEEEEEESS------TTCEEEEEECSBCTTSTBTTEEEEECSCSCTTCGGGTTSSCEEEE
T ss_pred CCCcccCCCCcCCEEEEEEEEeecC------CCCcEEEEECCCCCCcccCCEEEEEcCCCCCCCcCCccccceEEE
Confidence 8878876 589999999999872 28899999999999999999999999987 999999998764
No 23
>3f5v_A DER P 1 allergen; allergy, asthma, DUST mites, glycoprotein, hydrola protease, secreted, thiol protease; HET: P6G; 1.36A {Dermatophagoides pteronyssinus} PDB: 2as8_A 3rvw_A* 3rvx_A 3rvv_A* 3d6s_A*
Probab=100.00 E-value=2.1e-64 Score=453.97 Aligned_cols=208 Identities=32% Similarity=0.591 Sum_probs=190.5
Q ss_pred CCCCCceeccCCCCCCcccCCCCCccHHHHHhhhHHHHHHhhhcCCccccChhHhhhcCCCCCCCCCCCCCCCCCCCChH
Q 017548 135 NDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMN 214 (369)
Q Consensus 135 ~~lP~~~Dwr~~g~v~pV~dQg~cgsCwAfa~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~~~~~~~~~gC~GG~~~ 214 (369)
.+||++||||++|+|+||||||.||||||||+++++|+++++++++.++||+|+|+||.. +.||+||++.
T Consensus 8 ~~lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~lE~~~~~~~~~~~~lS~q~l~dc~~----------~~gC~GG~~~ 77 (222)
T 3f5v_A 8 GNAPAEIDLRQMRTVTPIRMQGGCGSAWAFSGVAATESAYLAYRQQSLDLAEQELVDCAS----------QHGCHGDTIP 77 (222)
T ss_dssp CCCCSCEEHHHHTCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHTC----------SSTTBCCCHH
T ss_pred cCCCCCCCCccCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhCcC----------CCCCCCCCHH
Confidence 479999999999999999999999999999999999999999999999999999999985 6799999999
Q ss_pred HHHHHHHHcCCcCCCCCcccCCCCCCCccCCCCCceEEeeeeEecC-chHHHHHHHHHh-cCCeEEEEEcc---cccccC
Q 017548 215 SAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVIS-SDEDQMAANLVK-HGPLAVGINAV---WMQTYI 289 (369)
Q Consensus 215 ~a~~~~~~~~Gi~~e~~yPy~~~~~~~c~~~~~~~~~~i~~~~~~~-~~~~~ik~~l~~-~gPV~v~~~~~---~f~~y~ 289 (369)
.|++|+.++ |+++|++|||.+.. +.|+ .+....+++++|..++ .++++||++|++ +|||+++|++. .|++|+
T Consensus 78 ~a~~~~~~~-Gi~~e~~yPY~~~~-~~C~-~~~~~~~~i~~~~~v~~~~~~~ik~~l~~~~gpV~v~~~~~~~~~f~~Y~ 154 (222)
T 3f5v_A 78 RGIEYIQHN-GVVQESYYRYVARE-QSCR-RPNAQRFGISNYCQIYPPNANKIREALAQTHSAIAVIIGIKDLDAFRHYD 154 (222)
T ss_dssp HHHHHHHHH-CEEBGGGSCCCSSC-CCCC-CCSSCEECCSEEEECCSCCHHHHHHHHHHHCCCEEEEEEESCHHHHHTCC
T ss_pred HHHHHHHHc-CCCchhhCCCcccC-CCcc-CCcCcceeeccEEEeCCCCHHHHHHHHHhcCCCEEEEEEeccchhhhccC
Confidence 999999997 99999999999887 8898 5566678899999985 489999999999 89999999873 299999
Q ss_pred CCeeecCCCC-CcCCeEEEEEEecccCCcCCcCCCCCEEEEEcCCCCCCCCCcEEEEEeCCCeeccccceeeEE
Q 017548 290 GGVSCPYICG-KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVA 362 (369)
Q Consensus 290 ~Gi~~~~~~~-~~~~Hav~iVGyg~~~~~~~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~~n~cgi~~~~~~~~ 362 (369)
+||+....|. ..++|||+|||||++ ++++|||||||||++|||+|||||+|+.|+|||+++++.+.
T Consensus 155 ~gi~~~~~~~~~~~~HaV~iVGyg~~-------~g~~ywivkNSWG~~WGe~Gy~~i~r~~n~cgi~~~~~~p~ 221 (222)
T 3f5v_A 155 GRTIIQRDNGYQPNYHAVNIVGYSNA-------QGVDYWIVRNSWDTNWGDNGYGYFAANIDLMMIEEYPYVVI 221 (222)
T ss_dssp SSSCBCCCCSSSCEEEEEEEEEEEEE-------TTEEEEEEECSBCTTSTBTTEEEEECSSCGGGTTTSCEEEE
T ss_pred CCceecCCCCCCccCcEEEEEEEecc-------CCCEEEEEEcCCCCCcccCCEEEEEcCCCeecCCCceeEEe
Confidence 9988655554 458999999999987 68999999999999999999999999999999999999875
No 24
>3p5u_A Actinidin; SAD, cysteine proteinases, hydrolase; 1.50A {Actinidia arguta} SCOP: d.3.1.1 PDB: 3p5v_A 3p5w_A 3p5x_A 1aec_A* 2act_A
Probab=100.00 E-value=3.7e-64 Score=451.62 Aligned_cols=210 Identities=40% Similarity=0.845 Sum_probs=189.3
Q ss_pred CCCceeccCCCCCCcccCCCCCccHHHHHhhhHHHHHHhhhcCCccccChhHhhhcCCCCCCCCCCCCCCCCCCCChHHH
Q 017548 137 LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSA 216 (369)
Q Consensus 137 lP~~~Dwr~~g~v~pV~dQg~cgsCwAfa~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~~~~~~~~~gC~GG~~~~a 216 (369)
||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||+.. ..+.||+||++..|
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~lE~~~~i~~~~~~~LS~q~l~dC~~~-------~~~~gC~GG~~~~a 73 (220)
T 3p5u_A 1 LPDYVDWRSSGAVVDIKDQGQCGSAWAFSTIAAVEGINKIATGDLISLSEQELVDCGRT-------QNTRGCDGGFMTDG 73 (220)
T ss_dssp CCSCEETTTTTCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCC-------SSCCTTBCCCHHHH
T ss_pred CCCCCcCCcCCCCCCCCcCCCChhHHHHHHHHHHHHHHHHHcCCCCCcCHhHcEECCCC-------CCCCCCCCCCHHHH
Confidence 79999999999999999999999999999999999999999999999999999999874 23789999999999
Q ss_pred HHHHHHcCCcCCCCCcccCCCCCCCccCCCC-CceEEeeeeEecCc-hHHHHHHHHHhcCCeEEEEEccc--ccccCCCe
Q 017548 217 FEYILKAGGVEREKDYPYTGTDGGSCKFDKS-KIAAAVSNFSVISS-DEDQMAANLVKHGPLAVGINAVW--MQTYIGGV 292 (369)
Q Consensus 217 ~~~~~~~~Gi~~e~~yPy~~~~~~~c~~~~~-~~~~~i~~~~~~~~-~~~~ik~~l~~~gPV~v~~~~~~--f~~y~~Gi 292 (369)
++|+.+++|+++|++|||.+.. +.|+.... ...+++++|..++. ++++|+++| .+|||+++|++.. |++|++||
T Consensus 74 ~~~~~~~~Gi~~e~~yPY~~~~-~~C~~~~~~~~~~~i~~~~~v~~~~~~~l~~~l-~~GPV~v~~~~~~~~f~~Y~~Gi 151 (220)
T 3p5u_A 74 FQFIINNGGINTEANYPYTAEE-GQCNLDLQQEKYVSIDTYENVPYNNEWALQTAV-AYQPVSVALEAAGYNFQHYSSGI 151 (220)
T ss_dssp HHHHHHHTCBCBTTTSCCCSSC-CCCCHHHHTCCSBCCCEEEECCTTCHHHHHHHH-TTSCEEEEECCCSHHHHTCCSSE
T ss_pred HHHHHHhCCcCcccccccccCC-CCcCcCCCCCceEEEccEEEeCCCcHHHHHHHH-hcCCEEEEEecCchhhccccCce
Confidence 9999998899999999999887 88986432 23467888988865 678888887 7899999999863 99999999
Q ss_pred eecCCCCCcCCeEEEEEEecccCCcCCcCCCCCEEEEEcCCCCCCCCCcEEEEEeCCC---eeccccceeeEEE
Q 017548 293 SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRN---VCGVDSMVSSVAA 363 (369)
Q Consensus 293 ~~~~~~~~~~~Hav~iVGyg~~~~~~~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~~n---~cgi~~~~~~~~~ 363 (369)
|.+ .|...++|||+|||||++ ++++|||||||||++|||+|||||+|+.| +|||++.++.+..
T Consensus 152 y~~-~~~~~~~HaV~iVGyg~~-------~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~Cgi~~~~~~p~~ 217 (220)
T 3p5u_A 152 FTG-PCGTAVDHAVTIVGYGTE-------GGIDYWIVKNSWGTTWGEEGYMRIQRNVGGVGQCGIAKKASYPVK 217 (220)
T ss_dssp ECC-CCCCSCCEEEEEEEEEEE-------TTEEEEEEECSBCTTSTBTTEEEEECCCCTTCGGGTTSSCEEEEC
T ss_pred ECC-CCCCccceEEEEEEEecC-------CCceEEEEECCCCCCcccCCEEEEECCCCCCCccCcccccceEEE
Confidence 975 687779999999999987 68899999999999999999999999986 9999999998764
No 25
>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A*
Probab=100.00 E-value=6.3e-64 Score=448.55 Aligned_cols=206 Identities=41% Similarity=0.802 Sum_probs=188.1
Q ss_pred CCCceeccCCCCCCcccCCCCCccHHHHHhhhHHHHHHhhhcCCccccChhHhhhcCCCCCCCCCCCCCCCCCCCChHHH
Q 017548 137 LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSA 216 (369)
Q Consensus 137 lP~~~Dwr~~g~v~pV~dQg~cgsCwAfa~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~~~~~~~~~gC~GG~~~~a 216 (369)
||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||+.. +.||+||++..|
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~---------~~gC~GG~~~~a 71 (216)
T 1ppo_A 1 LPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCERR---------SHGCKGGYPPYA 71 (216)
T ss_dssp CCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCSS---------SCTTBCCCHHHH
T ss_pred CCCcCcCCCCCCCCCCccCCcCccHHHHHHHHHHHHHHHHccCCceecCHHHHHhccCC---------CCCCCCCCHHHH
Confidence 69999999999999999999999999999999999999999999999999999999852 789999999999
Q ss_pred HHHHHHcCCcCCCCCcccCCCCCCCccCCCC-CceEEeeeeEecCc-hHHHHHHHHHhcCCeEEEEEcc-c-ccccCCCe
Q 017548 217 FEYILKAGGVEREKDYPYTGTDGGSCKFDKS-KIAAAVSNFSVISS-DEDQMAANLVKHGPLAVGINAV-W-MQTYIGGV 292 (369)
Q Consensus 217 ~~~~~~~~Gi~~e~~yPy~~~~~~~c~~~~~-~~~~~i~~~~~~~~-~~~~ik~~l~~~gPV~v~~~~~-~-f~~y~~Gi 292 (369)
++|+.++ |+++|++|||.+.. +.|+.... ...+++++|..++. ++++||++|++ |||+++|++. . |++|++||
T Consensus 72 ~~yi~~~-Gi~~e~~yPY~~~~-~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~-GPV~v~~~~~~~~f~~Y~~Gi 148 (216)
T 1ppo_A 72 LEYVAKN-GIHLRSKYPYKAKQ-GTCRAKQVGGPIVKTSGVGRVQPNNEGNLLNAIAK-QPVSVVVESKGRPFQLYKGGI 148 (216)
T ss_dssp HHHHHHH-CBCBTTTSCCCSSC-CCCCGGGCCSCCBCCCEEEECCSSCHHHHHHHHHH-SCEEEEECCCSHHHHHCCSSE
T ss_pred HHHHHHh-CcCccccCCccCCC-CCcCCCCCCCceEEeccEEEECCCCHHHHHHHHHh-CCEEEEEecCChhhhhcCCce
Confidence 9999988 79999999999887 88987543 45678889988875 78899999986 9999999985 3 99999999
Q ss_pred eecCCCCCcCCeEEEEEEecccCCcCCcCCCCCEEEEEcCCCCCCCCCcEEEEEeCC----CeeccccceeeEE
Q 017548 293 SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR----NVCGVDSMVSSVA 362 (369)
Q Consensus 293 ~~~~~~~~~~~Hav~iVGyg~~~~~~~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~~----n~cgi~~~~~~~~ 362 (369)
|.+ +|+..++|||+|||||++ ++++|||||||||++|||+|||||+|+. |+|||+++++.+.
T Consensus 149 y~~-~~~~~~~HaV~iVGyg~~-------~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~n~Cgi~~~~~~p~ 214 (216)
T 1ppo_A 149 FEG-PCGTKVDHAVTAVGYGKS-------GGKGYILIKNSWGTAWGEKGYIRIKRAPGNSPGVCGLYKSSYYPT 214 (216)
T ss_dssp ECC-SCCSCCCEEEEEEEEEEE-------TTEEEEEEECSBCSSSTBTTEEEEECCCSSSSCGGGTTSCCEEEE
T ss_pred ECC-CCCCCCCEEEEEEEeecc-------CCccEEEEEeCCCCCcccCcEEEEEcCCCCCCCcCccccceeeEe
Confidence 975 687778999999999988 6889999999999999999999999995 8999999998875
No 26
>1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E*
Probab=100.00 E-value=1.3e-63 Score=447.12 Aligned_cols=207 Identities=42% Similarity=0.767 Sum_probs=188.1
Q ss_pred CCCceeccCCCCCCcccCCCCCccHHHHHhhhHHHHHHhhhcCCccccChhHhhhcCCCCCCCCCCCCCCCCCCCChHHH
Q 017548 137 LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSA 216 (369)
Q Consensus 137 lP~~~Dwr~~g~v~pV~dQg~cgsCwAfa~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~~~~~~~~~gC~GG~~~~a 216 (369)
||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||.. .+.||+||++..|
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~---------~~~gC~GG~~~~a 71 (218)
T 1yal_A 1 YPQSIDWRAKGAVTPVKNQGACGSCWAFSTIATVEGINKIVTGNLLELSEQELVDCDK---------HSYGCKGGYQTTS 71 (218)
T ss_dssp CCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT---------TSCTTBCCCHHHH
T ss_pred CCCcCcCCCCCCCCCCccCccchhHHHHHHHHHHHHHHHHhcCCccccCHHHHHHhcC---------CCCCCCCCCHHHH
Confidence 7999999999999999999999999999999999999999999999999999999984 2789999999999
Q ss_pred HHHHHHcCCcCCCCCcccCCCCCCCccCCCC-CceEEeeeeEecCc-hHHHHHHHHHhcCCeEEEEEcc-c-ccccCCCe
Q 017548 217 FEYILKAGGVEREKDYPYTGTDGGSCKFDKS-KIAAAVSNFSVISS-DEDQMAANLVKHGPLAVGINAV-W-MQTYIGGV 292 (369)
Q Consensus 217 ~~~~~~~~Gi~~e~~yPy~~~~~~~c~~~~~-~~~~~i~~~~~~~~-~~~~ik~~l~~~gPV~v~~~~~-~-f~~y~~Gi 292 (369)
++|+.++ |+++|++|||.+.. +.|+.... ...+++++|..++. ++++||++|++ |||+++|++. . |++|++||
T Consensus 72 ~~~~~~~-Gi~~e~~yPY~~~~-~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~-GPV~v~i~~~~~~f~~Y~~Gi 148 (218)
T 1yal_A 72 LQYVANN-GVHTSKVYPYQAKQ-YKCRATDKPGPKVKITGYKRVPSNCETSFLGALAN-QPLSVLVEAGGKPFQLYKSGV 148 (218)
T ss_dssp HHHHHHH-CBCBTTTSCCCSSC-CCCCGGGCCSCCBCCSEEEECCSSBHHHHHHHHTT-SCEEEEECCCSHHHHTCCSSE
T ss_pred HHHHHHc-CCCccccccccCCC-CCcccCcCCCceEEEeeEEEeCCCCHHHHHHHHHh-CCEEEEEeccchhccccCCce
Confidence 9999988 79999999999887 88987533 45678889988876 78899999876 9999999986 3 99999999
Q ss_pred eecCCCCCcCCeEEEEEEecccCCcCCcCCCCCEEEEEcCCCCCCCCCcEEEEEeCC----CeeccccceeeEEE
Q 017548 293 SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR----NVCGVDSMVSSVAA 363 (369)
Q Consensus 293 ~~~~~~~~~~~Hav~iVGyg~~~~~~~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~~----n~cgi~~~~~~~~~ 363 (369)
|.+ +|+..++|||+|||||++ ++++|||||||||++|||+|||||+|+. |.|||+++++.+..
T Consensus 149 y~~-~~~~~~~HaV~iVGyg~~-------~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 215 (218)
T 1yal_A 149 FDG-PCGTKLDHAVTAVGYGTS-------DGKNYIIIKNSWGPNWGEKGYMRLKRQSGNSQGTCGVYKSSYYPFK 215 (218)
T ss_dssp ECC-SCCSCCCEEEEEEEEEEE-------TTEEEEEEECSBCTTSTBTTEEEEECCCSBSCCGGGTTSSCEEEEC
T ss_pred ECC-CCCCCCCEEEEEEEeecc-------CCccEEEEEeCCCCCcccCcEEEEECCCCCCCCccccccceeeEEE
Confidence 975 687778999999999988 6889999999999999999999999985 89999999988753
No 27
>2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A
Probab=100.00 E-value=1.3e-63 Score=453.62 Aligned_cols=214 Identities=36% Similarity=0.725 Sum_probs=191.3
Q ss_pred CCCCCceeccCCCCCCcccCCCCCccHHHHHhhhHHHHHHhhhcCCccccChhHhhhcCCCCCCCCCCCCCCCCCCCChH
Q 017548 135 NDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMN 214 (369)
Q Consensus 135 ~~lP~~~Dwr~~g~v~pV~dQg~cgsCwAfa~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~~~~~~~~~gC~GG~~~ 214 (369)
.+||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||+.. +.||+||++.
T Consensus 16 ~~lP~~~DwR~~~~vtpVkdQg~CGsCWAFaa~~alE~~~~i~~~~~~~lSeq~l~dC~~~---------~~gC~GG~~~ 86 (241)
T 2oul_A 16 NFDHAAYDWRLHSGVTPVKDQKNCGSCWAFSSIGSVESQYAIRKNKLITLSEQELVDCSFK---------NYGCNGGLIN 86 (241)
T ss_dssp CCCSSCEEGGGTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHCTT---------SCTTBCBCHH
T ss_pred ccCCCccccCcCCCCCCCccCccchHHHHHHHHHHHHHHHHHhcCCCcccCHHHHHhhcCC---------CCCCCCCCHH
Confidence 4799999999999999999999999999999999999999999999999999999999863 7899999999
Q ss_pred HHHHHHHHcCCcCCCCCcccCCCCCCC-ccCCCCCceEEeeeeEecCc-hHHHHHHHHHhcCCeEEEEEccc-ccccCCC
Q 017548 215 SAFEYILKAGGVEREKDYPYTGTDGGS-CKFDKSKIAAAVSNFSVISS-DEDQMAANLVKHGPLAVGINAVW-MQTYIGG 291 (369)
Q Consensus 215 ~a~~~~~~~~Gi~~e~~yPy~~~~~~~-c~~~~~~~~~~i~~~~~~~~-~~~~ik~~l~~~gPV~v~~~~~~-f~~y~~G 291 (369)
.|++|+.++.|+++|++|||.+.. +. |+.+.....+++++|..++. ++++||++| |||+++|++.. |+.|++|
T Consensus 87 ~a~~yi~~~~Gi~~e~~yPY~~~~-~~~C~~~~~~~~~~i~~~~~v~~~~~~~ik~~l---GPV~v~i~~~~~f~~Y~~G 162 (241)
T 2oul_A 87 NAFEDMIELGGICPDGDYPYVSDA-PNLCNIDRCTEKYGIKNYLSVPDNKLKEALRFL---GPISISVAVSDDFAFYKEG 162 (241)
T ss_dssp HHHHHHHHTTSBCBTTSSCCCTTS-CCCCCTTSSSCCBCCSEEEECCTTCHHHHHHHT---CCEEEEECBCHHHHTCCSS
T ss_pred HHHHHHHHhCCcCccccCCCcCCC-CCcCCCCCCccceeeeeEEEeCCCCHHHHHHhh---CCEEEEEecCcchhhcCCc
Confidence 999999886699999999999987 66 99876666788999988876 788999999 99999999875 9999999
Q ss_pred eeecCCCCCcCCeEEEEEEecccCC---cCCcCCCCCEEEEEcCCCCCCCCCcEEEEEeCCCe----eccccceeeEE
Q 017548 292 VSCPYICGKYLDHGVLIVGYGSSGF---APIRFKEKPYWIIKNSWGENWGENGYYKICMGRNV----CGVDSMVSSVA 362 (369)
Q Consensus 292 i~~~~~~~~~~~Hav~iVGyg~~~~---~~~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~~n~----cgi~~~~~~~~ 362 (369)
||.+ .|+..++|||+|||||++.. ...++.+++|||||||||++|||+|||||+|+.|. |||+++++++.
T Consensus 163 iy~~-~c~~~~~HaV~iVGyg~~~~~~~~~~~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~g~Cgi~~~~~~~~ 239 (241)
T 2oul_A 163 IFDG-ECGDQLNHAVMLVGFGMKEIVNPLTKKGEKHYYYIIKNSWGQQWGERGFINIETDESGLMRKCGLGTDAFIPL 239 (241)
T ss_dssp BCCS-CBCSSCCEEEEEEEEEEEEEECTTTCSEEEEEEEEEECSBCTTSTBTTEEEEEECSSSCCCGGGTTSSEEEEE
T ss_pred EEcC-cCCCCCCEEEEEEEeccccccccccccCCCCCEEEEEeCCCCCcccCCEEEEEcCCCCCCCcCCccceEEEEe
Confidence 9987 78766999999999998720 01112378899999999999999999999999876 99999998875
No 28
>3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} SCOP: d.3.1.1
Probab=100.00 E-value=2.6e-63 Score=443.79 Aligned_cols=204 Identities=39% Similarity=0.793 Sum_probs=185.0
Q ss_pred CCCceeccCCCCCCcccCCCCCccHHHHHhhhHHHHHHhhhcCCccccChhHhhhcCCCCCCCCCCCCCCCCCCCChHHH
Q 017548 137 LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSA 216 (369)
Q Consensus 137 lP~~~Dwr~~g~v~pV~dQg~cgsCwAfa~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~~~~~~~~~gC~GG~~~~a 216 (369)
||++||||++|+|+||||||.||||||||+++++|+++++++++.++||+|+|+||+.. +.||+||++..|
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~---------~~gC~GG~~~~a 71 (213)
T 3ioq_A 1 IPTSIDWRQKGAVTPVRNQGGCGSCWTFSSVAAVEGINKIVTGQLLSLSEQELLDCERR---------SYGCRGGFPLYA 71 (213)
T ss_dssp CCSCEEGGGGTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTT---------SCTTBCCCHHHH
T ss_pred CCCCCCcccCCCCCCCCcCCCChhHHHHHHHHHHHHHHHHHcCCCcccCHHHhhhhcCC---------CCCCCCCCHHHH
Confidence 79999999999999999999999999999999999999999999999999999999864 789999999999
Q ss_pred HHHHHHcCCcCCCCCcccCCCCCCCccCC-CCCceEEeeeeEecCchHHHHHHHHHhcCCeEEEEEcc-c-ccccCCCee
Q 017548 217 FEYILKAGGVEREKDYPYTGTDGGSCKFD-KSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAV-W-MQTYIGGVS 293 (369)
Q Consensus 217 ~~~~~~~~Gi~~e~~yPy~~~~~~~c~~~-~~~~~~~i~~~~~~~~~~~~ik~~l~~~gPV~v~~~~~-~-f~~y~~Gi~ 293 (369)
++|+.++ |+++|++|||.+.. +.|+.. .....+++.+|..++.++++++++++.+|||+++|++. . |+.|++|||
T Consensus 72 ~~~~~~~-Gi~~e~~yPY~~~~-~~C~~~~~~~~~~~i~~~~~v~~~~~~~~~~~~~~GPV~v~i~~~~~~f~~y~~Giy 149 (213)
T 3ioq_A 72 LQYVANS-GIHLRQYYPYEGVQ-RQCRASQAKGPKVKTDGVGRVPRNNEQALIQRIAIQPVSIVVEAKGRAFQNYRGGIF 149 (213)
T ss_dssp HHHHHHH-CEEBGGGSCCCSSC-CCCCGGGCCSCEECCCEEEECCSSCHHHHHHHHTTSCEEEEECCCSHHHHTCCSSEE
T ss_pred HHHHHHc-CCCchhccCcCCCC-CCCCCCccCCceEEeccEEEeCCchHHHHHHHHHhCCEEEEEEechhhhhhccCCeE
Confidence 9999998 99999999999887 889863 34566788999999876666666667789999999997 3 999999999
Q ss_pred ecCCCCCcCCeEEEEEEecccCCcCCcCCCCCEEEEEcCCCCCCCCCcEEEEEeCC----CeeccccceeeEEE
Q 017548 294 CPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR----NVCGVDSMVSSVAA 363 (369)
Q Consensus 294 ~~~~~~~~~~Hav~iVGyg~~~~~~~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~~----n~cgi~~~~~~~~~ 363 (369)
.. .|...++|||+|||||+ +|||||||||++|||+|||||+||. |+|||++.++.+..
T Consensus 150 ~~-~~~~~~~HaV~iVGyg~-----------~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~~p~~ 211 (213)
T 3ioq_A 150 AG-PCGTSIDHAVAAVGYGN-----------DYILIKNSWGTGWGEGGYIRIKRGSGNPQGACGVLSDSVFPTK 211 (213)
T ss_dssp CC-SCCSCCCEEEEEEEEET-----------TEEEEECSBCTTSTBTTEEEEESSCSSTTCGGGTTSCCEEEEC
T ss_pred cC-CCCCccCceEEEEecCC-----------CeEEEECCCCCCcccCCeEEEEcCCCCCCCcccccCcceEeEe
Confidence 86 67777999999999985 4999999999999999999999997 89999999988753
No 29
>3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A*
Probab=100.00 E-value=1.8e-63 Score=453.25 Aligned_cols=214 Identities=35% Similarity=0.698 Sum_probs=191.0
Q ss_pred CCCCCceeccCCCCCCcccCCCCCccHHHHHhhhHHHHHHhhhcCCccccChhHhhhcCCCCCCCCCCCCCCCCCCCChH
Q 017548 135 NDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMN 214 (369)
Q Consensus 135 ~~lP~~~Dwr~~g~v~pV~dQg~cgsCwAfa~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~~~~~~~~~gC~GG~~~ 214 (369)
.+||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||+.. +.||+||++.
T Consensus 18 ~~lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~alE~~~~i~~~~~~~lSeq~lvdC~~~---------~~gC~GG~~~ 88 (243)
T 3bwk_A 18 KLDRIAYDWRLHGGVTPVKDQALCGSCWAFSSVGSVESQYAIRKKALFLFSEQELVDCSVK---------NNGCYGGYIT 88 (243)
T ss_dssp CCCCSCEEGGGTTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHCSCCCBCHHHHHHHCTT---------SCGGGCCCHH
T ss_pred ccCCCceecCcCCCCCCCccCCCCchHHHHHHHHHHHHHHHHhcCCCcccCHHHHHHhcCC---------CCCCCCCCHH
Confidence 5799999999999999999999999999999999999999999999999999999999863 7899999999
Q ss_pred HHHHHHHHcCCcCCCCCcccCCCCCCC-ccCCCCCceEEeeeeEecCc-hHHHHHHHHHhcCCeEEEEEccc-ccccCCC
Q 017548 215 SAFEYILKAGGVEREKDYPYTGTDGGS-CKFDKSKIAAAVSNFSVISS-DEDQMAANLVKHGPLAVGINAVW-MQTYIGG 291 (369)
Q Consensus 215 ~a~~~~~~~~Gi~~e~~yPy~~~~~~~-c~~~~~~~~~~i~~~~~~~~-~~~~ik~~l~~~gPV~v~~~~~~-f~~y~~G 291 (369)
.|++|+.++.|+++|++|||.+.. +. |+.+.....+++++|..++. ++++||++| |||+++|++.. |+.|++|
T Consensus 89 ~a~~y~~~~~Gi~~e~~yPY~~~~-~~~C~~~~~~~~~~i~~~~~v~~~~~~~ik~~l---GPV~v~i~~~~~f~~Y~~G 164 (243)
T 3bwk_A 89 NAFDDMIDLGGLCSQDDYPYVSNL-PETCNLKRCNERYTIKSYVSIPDDKFKEALRYL---GPISISIAASDDFAFYRGG 164 (243)
T ss_dssp HHHHHHHHTTSBCBTTTSCCCTTS-CCCCCGGGCSSCBCCCEEEECCTTCHHHHHHHT---CCEEEEECCCHHHHTCCSS
T ss_pred HHHHHHHHhCCcccccccCCcCCC-CCcCCCCCCccceeeeeEEEeCCCCHHHHHHhh---CCEEEEEecChhHHhcCCc
Confidence 999999886699999999999987 66 98866666788899988876 789999999 99999999875 9999999
Q ss_pred eeecCCCCCcCCeEEEEEEecccCC---cCCcCCCCCEEEEEcCCCCCCCCCcEEEEEeCCCe----eccccceeeEE
Q 017548 292 VSCPYICGKYLDHGVLIVGYGSSGF---APIRFKEKPYWIIKNSWGENWGENGYYKICMGRNV----CGVDSMVSSVA 362 (369)
Q Consensus 292 i~~~~~~~~~~~Hav~iVGyg~~~~---~~~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~~n~----cgi~~~~~~~~ 362 (369)
||.+ .|+..++|||+|||||++.. ...++.+++|||||||||++|||+|||||+|+.|. |||+++++++.
T Consensus 165 iy~~-~c~~~~~HaV~iVGyg~~~~~~~~~~~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~g~Cgi~~~~~~~~ 241 (243)
T 3bwk_A 165 FYDG-ECGAAPNHAVILVGYGMKDIYNEDTGRMEKFYYYIIKNSWGSDWGEGGYINLETDENGYKKTCSIGTEAYVPL 241 (243)
T ss_dssp SCCC-CCCSSCCEEEEEEEEEEEEEECTTTCSEEEEEEEEEECSBCTTSTBTTEEEEEECSSSCCCSTTTTSSEEEEE
T ss_pred eecC-CCCCcCCeEEEEEEecCccccccccccCCCCCEEEEEeCCCCCcCCCcEEEEEcCCCCCCCcCCccceEEEEe
Confidence 9987 78766999999999998720 01122378899999999999999999999999876 99999998875
No 30
>1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1
Probab=100.00 E-value=4.2e-63 Score=446.85 Aligned_cols=212 Identities=45% Similarity=0.879 Sum_probs=189.3
Q ss_pred CCCCceeccCCCCCCcccCCCCCccHHHHHhhhHHHHHHhhhcCCccccChhHhhhcCCCCCCCCCCCCCCCCCCCChHH
Q 017548 136 DLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNS 215 (369)
Q Consensus 136 ~lP~~~Dwr~~g~v~pV~dQg~cgsCwAfa~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~~~~~~~~~gC~GG~~~~ 215 (369)
+||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||+.. .+.||+||++..
T Consensus 1 ~lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~--------~~~gC~GG~~~~ 72 (229)
T 1s4v_A 1 TVPASVDWRKKGAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDTD--------QNQGCNGGLMDY 72 (229)
T ss_dssp CCCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCS--------SCCTTBCBCHHH
T ss_pred CCCCCEeCCCCCCCCCCccCccchHHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhhCCC--------CCCCCCCCCHHH
Confidence 489999999999999999999999999999999999999999999999999999999852 378999999999
Q ss_pred HHHHHHHcCCcCCCCCcccCCCCCCCccCCC-CCceEEeeeeEecCc-hHHHHHHHHHhcCCeEEEEEcc-c-ccccCCC
Q 017548 216 AFEYILKAGGVEREKDYPYTGTDGGSCKFDK-SKIAAAVSNFSVISS-DEDQMAANLVKHGPLAVGINAV-W-MQTYIGG 291 (369)
Q Consensus 216 a~~~~~~~~Gi~~e~~yPy~~~~~~~c~~~~-~~~~~~i~~~~~~~~-~~~~ik~~l~~~gPV~v~~~~~-~-f~~y~~G 291 (369)
|++|+.+++|+++|++|||.+.. +.|+... ....+++++|..++. +++.||++|.+ |||+++|++. . |++|++|
T Consensus 73 a~~y~~~~~Gi~~e~~yPY~~~~-~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~-GPV~v~i~~~~~~f~~Y~~G 150 (229)
T 1s4v_A 73 AFEFIKQRGGITTEANYPYEAYD-GTCDVSKENAPAVSIDGHENVPENDENALLKAVAN-QPVSVAIDAGGSDFQFYSEG 150 (229)
T ss_dssp HHHHHHHHTCBCBTTTSCCCSSC-CCCCHHHHTCCCBCCCEEEECCTTCHHHHHHHHHH-SCEEEEECCCSHHHHTCCSS
T ss_pred HHHHHHHhCCccccccCCccCCC-CCCCCCCCCCcEEEeeeEEEeCCccHHHHHHHHhc-CCEEEEEEeCcHHHhhCCCc
Confidence 99999988799999999999887 8898642 334577888988876 68889998876 9999999984 3 9999999
Q ss_pred eeecCCCCCcCCeEEEEEEecccCCcCCcCCCCCEEEEEcCCCCCCCCCcEEEEEeCC----CeeccccceeeEEEe
Q 017548 292 VSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR----NVCGVDSMVSSVAAI 364 (369)
Q Consensus 292 i~~~~~~~~~~~Hav~iVGyg~~~~~~~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~~----n~cgi~~~~~~~~~~ 364 (369)
||.+ +|+..++|||+|||||++. ++++|||||||||++|||+|||||+|+. |+|||+++++.+...
T Consensus 151 iy~~-~c~~~~~HaV~iVGyg~~~------~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~~p~~~ 220 (229)
T 1s4v_A 151 VFTG-SCGTELDHGVAIVGYGTTI------DGTKYWTVKNSWGPEWGEKGYIRMERGISDKEGLCGIAMEASYPIKK 220 (229)
T ss_dssp EECC-CCCCCCCEEEEEEEEEECT------TSCEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSSCEEEECC
T ss_pred EECC-CCCCCCCeEEEEEEecccc------CCCCEEEEEeCCCCCccCCcEEEEEcCCCCCCCcCcccccceeeEec
Confidence 9975 5877789999999999872 3889999999999999999999999995 899999999887643
No 31
>1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A*
Probab=100.00 E-value=7.4e-63 Score=438.90 Aligned_cols=201 Identities=40% Similarity=0.873 Sum_probs=183.7
Q ss_pred CCCceeccCCCCCCcccCCCCCccHHHHHhhhHHHHHHhhhcCCccccChhHhhhcCCCCCCCCCCCCCCCCCCCChHHH
Q 017548 137 LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSA 216 (369)
Q Consensus 137 lP~~~Dwr~~g~v~pV~dQg~cgsCwAfa~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~~~~~~~~~gC~GG~~~~a 216 (369)
||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||+.. +.||+||++..|
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~---------~~gC~GG~~~~a 71 (208)
T 1o0e_A 1 LPEQIDWRKKGAVTPVKNQGSCGSCWAFSTVSTVESINQIRTGNLISLSEQELVDCDKK---------NHGCLGGAFVFA 71 (208)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTT---------SCTTBCCCHHHH
T ss_pred CCCcCcCCCCCCCCCCccCCCCccHHHHHHHHHHHHHHHHhcCCceecCHHHhhhhcCC---------CCCCCCCCHHHH
Confidence 79999999999999999999999999999999999999999999999999999999852 789999999999
Q ss_pred HHHHHHcCCcCCCCCcccCCCCCCCccCCCCCceEEeeeeEecCc-hHHHHHHHHHhcCCeEEEEEccc--ccccCCCee
Q 017548 217 FEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISS-DEDQMAANLVKHGPLAVGINAVW--MQTYIGGVS 293 (369)
Q Consensus 217 ~~~~~~~~Gi~~e~~yPy~~~~~~~c~~~~~~~~~~i~~~~~~~~-~~~~ik~~l~~~gPV~v~~~~~~--f~~y~~Gi~ 293 (369)
++|+.+++|+++|++|||.+.+ +.|+. ....+++++|..++. ++++||++|.+ |||+++|++.. |++|++|||
T Consensus 72 ~~y~~~~~Gi~~e~~yPY~~~~-~~C~~--~~~~~~i~~~~~v~~~~~~~i~~~l~~-GPV~v~i~~~~~~f~~Y~~Gvy 147 (208)
T 1o0e_A 72 YQYIINNGGIDTQANYPYKAVQ-GPCQA--ASKVVSIDGYNGVPFCNEXALKQAVAV-QPSTVAIDASSAQFQQYSSGIF 147 (208)
T ss_dssp HHHHHHHTCBCBTTTSCCCSSC-CCCCC--CCCCBCCCEEEECCTTCHHHHHHHHHH-SCEEEEECCCSHHHHTCCSSEE
T ss_pred HHHHHHhCCcCcccccCccCCC-CcCCC--CCceEEeCeEEEeCCCCHHHHHHHHHh-CCEEEEEEccCcccccccCceE
Confidence 9999988799999999999887 88986 344577888988875 78899999876 99999999863 999999999
Q ss_pred ecCCCCCcCCeEEEEEEecccCCcCCcCCCCCEEEEEcCCCCCCCCCcEEEEEeCC--CeeccccceeeEE
Q 017548 294 CPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR--NVCGVDSMVSSVA 362 (369)
Q Consensus 294 ~~~~~~~~~~Hav~iVGyg~~~~~~~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~~--n~cgi~~~~~~~~ 362 (369)
.+ +|+..++|||+|||||+ +|||||||||++|||+|||||+|+. |.|||+++++.+.
T Consensus 148 ~~-~c~~~~~HaV~iVGyg~-----------~yWivkNSWG~~WGe~Gy~~i~~~~~~~~Cgi~~~~~~p~ 206 (208)
T 1o0e_A 148 SG-PCGTKLNHGVTIVGYQA-----------NYWIVRNSWGRYWGEKGYIRMLRVGGCGLCGIARLPYYPT 206 (208)
T ss_dssp CC-CCCSCCCEEEEEEEECS-----------SEEEEECSBCTTSTBTTEEEEECCSTTCGGGTTSSCEEEE
T ss_pred CC-CCCCcCCEEEEEEEeCC-----------CeEEEEcCCCCcccCCcEEEEEcCCCCCcCCCcccceeee
Confidence 76 58777899999999995 5999999999999999999999997 8999999998875
No 32
>2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ...
Probab=100.00 E-value=1.1e-62 Score=439.32 Aligned_cols=202 Identities=41% Similarity=0.782 Sum_probs=184.3
Q ss_pred CCCceeccCCCCCCcccCCCCCccHHHHHhhhHHHHHHhhhcCCccccChhHhhhcCCCCCCCCCCCCCCCCCCCChHHH
Q 017548 137 LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSA 216 (369)
Q Consensus 137 lP~~~Dwr~~g~v~pV~dQg~cgsCwAfa~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~~~~~~~~~gC~GG~~~~a 216 (369)
||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||+.. +.||+||++..|
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~CGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~---------~~gC~GG~~~~a 71 (212)
T 2cio_A 1 IPEYVDWRQKGAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRTGNLNQYSEQELLDCDRR---------SYGCNGGYPWSA 71 (212)
T ss_dssp CCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTT---------SCTTBCCCHHHH
T ss_pred CCCcccCCCCCCCCCCccCCccchHHHHHHHHHHHHHHHHhcCCccccCHHHHHHhCCC---------CCCCCCCCHHHH
Confidence 79999999999999999999999999999999999999999999999999999999852 789999999999
Q ss_pred HHHHHHcCCcCCCCCcccCCCCCCCccCCC-CCceEEeeeeEecCc-hHHHHHHHHHhcCCeEEEEEcc--cccccCCCe
Q 017548 217 FEYILKAGGVEREKDYPYTGTDGGSCKFDK-SKIAAAVSNFSVISS-DEDQMAANLVKHGPLAVGINAV--WMQTYIGGV 292 (369)
Q Consensus 217 ~~~~~~~~Gi~~e~~yPy~~~~~~~c~~~~-~~~~~~i~~~~~~~~-~~~~ik~~l~~~gPV~v~~~~~--~f~~y~~Gi 292 (369)
++|+.++ |+++|++|||.+.. +.|+... ....+++++|..++. ++++||++|.+ |||+++|++. .|++|++||
T Consensus 72 ~~yi~~~-Gi~~e~~yPY~~~~-~~C~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~-GPV~v~i~~~~~~f~~Y~~Gv 148 (212)
T 2cio_A 72 LQLVAQY-GIHYRNTYPYEGVQ-RYCRSREKGPYAAKTDGVRQVQPYNEGALLYSIAN-QPVSVVLEAAGKDFQLYRGGI 148 (212)
T ss_dssp HHHHHHT-CBCBTTTSCCCSSC-CCCCTTTTCSCSBCCSEEEECCSSCHHHHHHHHHH-SCEEEEECCCSHHHHTCCSSE
T ss_pred HHHHHHh-CcCcccccCCcCCC-CCcCCCCCCCceEEEeeEEEeCCccHHHHHHHHHh-CCEEEEEeccCcchhhcCCce
Confidence 9999987 79999999999887 8898765 355678889988876 78899999876 9999999986 399999999
Q ss_pred eecCCCCCcCCeEEEEEEecccCCcCCcCCCCCEEEEEcCCCCCCCCCcEEEEEeCC----CeeccccceeeEE
Q 017548 293 SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR----NVCGVDSMVSSVA 362 (369)
Q Consensus 293 ~~~~~~~~~~~Hav~iVGyg~~~~~~~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~~----n~cgi~~~~~~~~ 362 (369)
|.+ +|+..++|||+|||||+ +|||||||||++|||+|||||+|+. |+|||+++++.+.
T Consensus 149 y~~-~~~~~~~HaV~iVGyg~-----------~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~ 210 (212)
T 2cio_A 149 FVG-PCGNKVDHAVAAVGYGP-----------NYILIKNSWGTGWGENGYIRIKRGTGNSYGVCGLYTSSFYPV 210 (212)
T ss_dssp ECC-CCCSCCCEEEEEEEEET-----------TEEEEECSBCTTSTBTTEEEEECSSSCTTCGGGTTSCCEEEE
T ss_pred ecC-CCCCCCCEEEEEEEecC-----------CeEEEEeCCCCCcccCcEEEEEcCCCCCCCccCcccceeEEE
Confidence 976 58777899999999995 5999999999999999999999996 8999999998765
No 33
>3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} SCOP: d.3.1.0
Probab=100.00 E-value=1.3e-63 Score=449.64 Aligned_cols=213 Identities=45% Similarity=0.864 Sum_probs=193.1
Q ss_pred CCCCCceeccCCCCCCcccCCCCCccHHHHHhhhHHHHHHhhhcCCccccChhHhhhcCCCCCCCCCCCCCCCCCCCChH
Q 017548 135 NDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMN 214 (369)
Q Consensus 135 ~~lP~~~Dwr~~g~v~pV~dQg~cgsCwAfa~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~~~~~~~~~gC~GG~~~ 214 (369)
.+||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||+.. ..+.||+||++.
T Consensus 5 ~~lP~~~Dwr~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~~c~~~-------~~~~gC~GG~~~ 77 (224)
T 3f75_A 5 SELPAGVDWRSRGCVTPVKDQRDCGSCWAFSTTGALEGAHCAKTGKLVSLSEQELMDCSRA-------EGNQSCSGGEMN 77 (224)
T ss_dssp GGSCSCEEHHHHTCCCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGG-------GTCCGGGCBCHH
T ss_pred cCCCCceecccCCCCCCCccCCCCccHHHHHHHHHHHHHHHHhcCCCceeCHHHHhhcccC-------CCCCCCCCCCHH
Confidence 4799999999999999999999999999999999999999999999999999999999864 237899999999
Q ss_pred HHHHHHHHcCCcCCCCCcccCCCCCCCccCCCCCceEEeeeeEecCc-hHHHHHHHHHhcCCeEEEEEccc--ccccCCC
Q 017548 215 SAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISS-DEDQMAANLVKHGPLAVGINAVW--MQTYIGG 291 (369)
Q Consensus 215 ~a~~~~~~~~Gi~~e~~yPy~~~~~~~c~~~~~~~~~~i~~~~~~~~-~~~~ik~~l~~~gPV~v~~~~~~--f~~y~~G 291 (369)
.|++|+.+++|+++|++|||.+.+ +.|+.......+++.+|..++. ++++||++|. +|||+++|++.. |++|++|
T Consensus 78 ~a~~~~~~~~Gi~~e~~yPY~~~~-~~C~~~~~~~~~~i~~~~~~~~~~~~~l~~~l~-~gPV~v~i~~~~~~f~~y~~G 155 (224)
T 3f75_A 78 DAFQYVLDSGGICSEDAYPYLARD-EECRAQSCEKVVKILGFKDVPRRSEAAMKAALA-KSPVSIAIEADQMPFQFYHEG 155 (224)
T ss_dssp HHHHHHHHHTCBCBTTTSCCCSSC-CCCCGGGSCCCBCCSEEEECCSSCHHHHHHHHH-HSCEEEEECCCSHHHHTEEEE
T ss_pred HHHHHHHHhCCccccccCCCcCCC-CCCCcCCCCceEEeccEEEeCCChHHHHHHHHc-CCCEEEEEeccchhhhcCccc
Confidence 999999985699999999999988 8898776666677889988865 7889999998 899999999874 9999999
Q ss_pred eeecCCCCCcCCeEEEEEEecccCCcCCcCCCCCEEEEEcCCCCCCCCCcEEEEEeCC---CeeccccceeeEE
Q 017548 292 VSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR---NVCGVDSMVSSVA 362 (369)
Q Consensus 292 i~~~~~~~~~~~Hav~iVGyg~~~~~~~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~~---n~cgi~~~~~~~~ 362 (369)
||. +.|...++|||+|||||++. +++++|||||||||++|||+|||||+|+. |.|||+++++.+.
T Consensus 156 iy~-~~~~~~~~Hav~iVGyg~~~-----~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~cgi~~~~~~p~ 223 (224)
T 3f75_A 156 VFD-ASCGTDLDHGVLLVGYGTDK-----ESKKDFWIMKNSWGTGWGRDGYMYMAMHKGEEGQCGLLLDASFPV 223 (224)
T ss_dssp EEC-CCCCCCCCEEEEEEEEEEET-----TTTEEEEEEECSBCTTSTBTTEEEEESCSCTTCGGGTTSSCEEEE
T ss_pred eEC-CCCCCccCeEEEEEEEeccc-----CCCCCEEEEECCcCcchhhCCEEEEEcCCCCCCcCcccCceeeee
Confidence 998 67877799999999999862 25788999999999999999999999998 9999999998875
No 34
>2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare}
Probab=100.00 E-value=4e-63 Score=453.82 Aligned_cols=212 Identities=43% Similarity=0.884 Sum_probs=190.1
Q ss_pred CCCCCceeccCCCCCCcccCCCCCccHHHHHhhhHHHHHHhhhcCCccccChhHhhhcCCCCCCCCCCCCCCCCCCCChH
Q 017548 135 NDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMN 214 (369)
Q Consensus 135 ~~lP~~~Dwr~~g~v~pV~dQg~cgsCwAfa~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~~~~~~~~~gC~GG~~~ 214 (369)
.+||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||+.. .+.||+||++.
T Consensus 2 ~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~LSeQ~lvdC~~~--------~~~GC~GG~~~ 73 (262)
T 2fo5_A 2 SDLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTA--------DNDGCQGGLMD 73 (262)
T ss_dssp -CCCSCEETTTTTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCS--------SCCGGGCBCHH
T ss_pred CCCCCcccCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhhcCC--------CCCCCCCCCHH
Confidence 3699999999999999999999999999999999999999999999999999999999862 37899999999
Q ss_pred HHHHHHHHcCCcCCCCCcccCCCCCCCccCCC---CCc-eEEeeeeEecCc-hHHHHHHHHHhcCCeEEEEEcc--cccc
Q 017548 215 SAFEYILKAGGVEREKDYPYTGTDGGSCKFDK---SKI-AAAVSNFSVISS-DEDQMAANLVKHGPLAVGINAV--WMQT 287 (369)
Q Consensus 215 ~a~~~~~~~~Gi~~e~~yPy~~~~~~~c~~~~---~~~-~~~i~~~~~~~~-~~~~ik~~l~~~gPV~v~~~~~--~f~~ 287 (369)
.|++|+.+++|+++|++|||.+.. +.|+... ... .+++++|..++. +++.||++|.+ |||+++|++. .|++
T Consensus 74 ~a~~yi~~~~Gi~~e~~yPY~~~~-~~C~~~~~~~~~~~~~~i~~y~~v~~~~e~~ik~al~~-GPV~v~i~~~~~~f~~ 151 (262)
T 2fo5_A 74 NAFEYIKNNGGLITEAAYPYRAAR-GTCNVARAAQNSPVVVHIDGHQDVPANSEEDLARAVAN-QPVSVAVEASGKAFMF 151 (262)
T ss_dssp HHHHHHHHTTCEEBTTTSCCCSSC-CCCCHHHHHHHCCCEECCCEEEECCTTCHHHHHHHHHH-SCEEEEECCCSHHHHT
T ss_pred HHHHHHHHcCCcCchhcCCCcCcc-CccCCcccccCCceeEEeceEEEcCCchHHHHHHHHHh-CCEEEEEecChHHHhc
Confidence 999999988799999999999987 8898653 344 678889988875 78889999877 9999999986 3999
Q ss_pred cCCCeeecCCCCCcCCeEEEEEEecccCCcCCcCCCCCEEEEEcCCCCCCCCCcEEEEEeCC----CeeccccceeeEEE
Q 017548 288 YIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR----NVCGVDSMVSSVAA 363 (369)
Q Consensus 288 y~~Gi~~~~~~~~~~~Hav~iVGyg~~~~~~~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~~----n~cgi~~~~~~~~~ 363 (369)
|++|||.. .|+..++|||+|||||++. +|++|||||||||++|||+|||||+|+. |.|||++.++.+..
T Consensus 152 Y~sGVy~~-~c~~~~~HaV~IVGyg~~~------~G~~YWivkNSWG~~WGe~GY~ri~r~~n~~~~~CgI~~~~~~p~~ 224 (262)
T 2fo5_A 152 YSEGVFTG-ECGTELDHGVAVVGYGVAE------DGKAYWTVKNSWGPSWGEQGYIRVEKDSGASGGLCGIAMEASYPVK 224 (262)
T ss_dssp CCSSEECC-CCCCCCCEEEEEEEEEECT------TSCEEEEEECSBCTTSTBTTEEEEESSCSCTTCGGGTTTSCEEEEC
T ss_pred cCCceECC-CCCCcCCEEEEEEEEcccC------CCceEEEEEeCCCCCCCCCeEEEEEcCCCCCCCccceeeeeeEEEe
Confidence 99999976 6877789999999999872 4889999999999999999999999986 45999999987764
No 35
>2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana}
Probab=100.00 E-value=1.7e-62 Score=438.54 Aligned_cols=203 Identities=38% Similarity=0.813 Sum_probs=185.7
Q ss_pred CCCceeccCCCCCCcccCCCCCccHHHHHhhhHHHHHHhhhcCCccccChhHhhhcCCCCCCCCCCCCCCCCCCCChHHH
Q 017548 137 LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSA 216 (369)
Q Consensus 137 lP~~~Dwr~~g~v~pV~dQg~cgsCwAfa~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~~~~~~~~~gC~GG~~~~a 216 (369)
||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||+.. +.||+||++..|
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~---------~~gC~GG~~~~a 71 (214)
T 2bdz_A 1 YPESIDWREKGAVTPVKNQNPCGSCWAFSTVATIEGINKIITGQLISLSEQELLDCERR---------SHGCDGGYQTTS 71 (214)
T ss_dssp CCSCEETTTTTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCBCCBCHHHHHHHCTT---------SCTTBCCCHHHH
T ss_pred CCCcEeCCCCCCCCCCccCCCCccHHHHHhHHHHHHHHHHhcCCccccCHHHHHhhcCC---------CCCCCCCCHHHH
Confidence 69999999999999999999999999999999999999999999999999999999852 789999999999
Q ss_pred HHHHHHcCCcCCCCCcccCCCCCCCccCCCC-CceEEeeeeEecCc-hHHHHHHHHHhcCCeEEEEEcc-c-ccccCCCe
Q 017548 217 FEYILKAGGVEREKDYPYTGTDGGSCKFDKS-KIAAAVSNFSVISS-DEDQMAANLVKHGPLAVGINAV-W-MQTYIGGV 292 (369)
Q Consensus 217 ~~~~~~~~Gi~~e~~yPy~~~~~~~c~~~~~-~~~~~i~~~~~~~~-~~~~ik~~l~~~gPV~v~~~~~-~-f~~y~~Gi 292 (369)
++|+.++ |+++|++|||.+.. +.|+.... ...+++++|..++. ++++||++|++ |||+++|++. . |++|++||
T Consensus 72 ~~y~~~~-Gi~~e~~yPY~~~~-~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~-gPV~v~i~~~~~~f~~Y~~Gi 148 (214)
T 2bdz_A 72 LQYVVDN-GVHTEREYPYEKKQ-GRCRAKDKKGPKVYITGYKYVPANDEISLIQAIAN-QPVSVVTDSRGRGFQFYKGGI 148 (214)
T ss_dssp HHHHHHH-CEEBTTTSCCCSSC-CCCCTTTCCSCEECCCEEEEECSSBHHHHHHHHHH-SCEEEEECCCSHHHHTCCSSE
T ss_pred HHHHHHh-CCCccccCCCCCCC-CCCCCCCCCCceeeecCEEEeCCCcHHHHHHHHHh-CCEEEEEeeChhHhhcccCce
Confidence 9999998 99999999999887 88987654 45678899988875 78899999987 9999999987 3 99999999
Q ss_pred eecCCCCCcCCeEEEEEEecccCCcCCcCCCCCEEEEEcCCCCCCCCCcEEEEEeCC----CeeccccceeeEEE
Q 017548 293 SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR----NVCGVDSMVSSVAA 363 (369)
Q Consensus 293 ~~~~~~~~~~~Hav~iVGyg~~~~~~~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~~----n~cgi~~~~~~~~~ 363 (369)
|.. +|...++|||+|||||+ +|||||||||++|||+|||||+|+. |+|||++.++.+..
T Consensus 149 y~~-~~~~~~~HaV~iVGyg~-----------~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 211 (214)
T 2bdz_A 149 YEG-PCGTNTDHAVTAVGYGK-----------TYLLLKNSWGPNWGEKGYIRIKRASGRSKGTCGVYTSSFFPIK 211 (214)
T ss_dssp ECC-SCCSCCCEEEEEEEECS-----------SEEEEECSBCTTSTBTTEEEEECCCSBSSCGGGTTSCEEEEEC
T ss_pred ecC-CCCCCCCeEEEEEEcCC-----------CeEEEEeCCCCCcccCCEEEEEcCCCCCCCcccccccceEEEe
Confidence 976 58777999999999995 5999999999999999999999986 89999999987653
No 36
>3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} SCOP: d.3.1.0 PDB: 3s3q_A* 3s3r_A*
Probab=100.00 E-value=1.9e-61 Score=443.01 Aligned_cols=211 Identities=31% Similarity=0.701 Sum_probs=178.4
Q ss_pred CCCCceeccCC----CCCCcccCCCCCccHHHHHhhhHHHHHHhhhcC--CccccChhHhhhcCCCCCCCCCCCCCCCCC
Q 017548 136 DLPTDFDWRDH----GAVTGVKDQGACGSCWSFSATGALEGAHFLSTG--ELVSLSEQQLVDCDHECDPEESGSCDSGCN 209 (369)
Q Consensus 136 ~lP~~~Dwr~~----g~v~pV~dQg~cgsCwAfa~~~~le~~~~~~~~--~~~~lS~q~l~dc~~~~~~~~~~~~~~gC~ 209 (369)
+||++||||++ +.|+||||||.||||||||++++||++++|+++ ..++||+|+|+||+.. .+.||+
T Consensus 2 ~lP~s~D~R~~~~~~~~vtpVkdQg~CGSCWAFaa~~ale~~~~i~~~~~~~~~LSeQ~lvdC~~~--------~~~GC~ 73 (254)
T 3qsd_A 2 EIPSSFDSRKKWPRCKSIATIRDQSRCGSCWAFGAVEAMSDRSCIQSGGKQNVELSAVDLLSCCES--------CGLGCE 73 (254)
T ss_dssp CCCSCEEHHHHCTTCGGGGCCCBCCSSBCHHHHHHHHHHHHHHHHHTTTCCCCCBCHHHHHHHCTT--------SBCTTB
T ss_pred CCCCcCccccccCCCCccCCCCCcccCccHHHHHHHHHHHHHHHHHhCCCccccCCHHHHHhhhcC--------CCCCCC
Confidence 58999999998 689999999999999999999999999999976 6789999999999863 368999
Q ss_pred CCChHHHHHHHHHcCCcCCCCCc-------ccC---------CCCCCCccCCC--------------CCc----eEEeee
Q 017548 210 GGLMNSAFEYILKAGGVEREKDY-------PYT---------GTDGGSCKFDK--------------SKI----AAAVSN 255 (369)
Q Consensus 210 GG~~~~a~~~~~~~~Gi~~e~~y-------Py~---------~~~~~~c~~~~--------------~~~----~~~i~~ 255 (369)
||++..|++|++++ ||++|++| ||. +.. +.|.... ... ......
T Consensus 74 GG~~~~a~~yi~~~-Gi~~e~~y~~~~~c~PY~~~~c~~~~~~~~-~~C~~~~~~~~~c~~~c~~~~~~~~~~~~~~~~~ 151 (254)
T 3qsd_A 74 GGILGPAWDYWVKE-GIVTGSSKENHAGCEPYPFPKCEHHTKGKY-PPCGSKIYKTPRCKQTCQKKYKTPYTQDKHRGKS 151 (254)
T ss_dssp CBCHHHHHHHHHHT-CBCBCCCTTTCCSSSCCSSCCCBCSSCSSS-CBCCSCCCCCCCCCCCCCTTCCSCGGGGCBCCSE
T ss_pred CCCHHHHHHHHHHc-CCCcccccccCcCcCCcccccccccccCcC-CCCcccccCCccccccccCCccceeeeeeeeeee
Confidence 99999999999988 99999988 996 222 4453210 000 000111
Q ss_pred eEecCchHHHHHHHHHhcCCeEEEEEccc-ccccCCCeeecCCCCCcCCeEEEEEEecccCCcCCcCCCCCEEEEEcCCC
Q 017548 256 FSVISSDEDQMAANLVKHGPLAVGINAVW-MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWG 334 (369)
Q Consensus 256 ~~~~~~~~~~ik~~l~~~gPV~v~~~~~~-f~~y~~Gi~~~~~~~~~~~Hav~iVGyg~~~~~~~~~~~~~ywivkNSWG 334 (369)
...++.++++||++|+++|||+++|++.. |++|++|||....+...++|||+|||||++ ++++|||||||||
T Consensus 152 ~~~~~~~~~~i~~~l~~~gPv~~~~~~~~~f~~y~~Gi~~~~~~~~~~~Hav~iVGyg~~-------~g~~ywivkNSWG 224 (254)
T 3qsd_A 152 SYNVKNDEKAIQKEIMKYGPVEAGFTVYEDFLNYKSGIYKHITGETLGGHAIRIIGWGVE-------NKAPYWLIANSWN 224 (254)
T ss_dssp EEECCSCHHHHHHHHHHHCCEEEEEEEEGGGGGCCSSEECCCSSCEEEEEEEEEEEEEEE-------TTEEEEEEECSBC
T ss_pred eEecCCcHHHHHHHHHHcCCEEEEEEeccccccccCCeeccCCCCCCCCeEEEEEEEeec-------CCeeEEEEEeCCC
Confidence 22455689999999999999999999865 999999999876554457999999999987 6889999999999
Q ss_pred CCCCCCcEEEEEeCCCeeccccceeeEEE
Q 017548 335 ENWGENGYYKICMGRNVCGVDSMVSSVAA 363 (369)
Q Consensus 335 ~~WG~~Gy~~i~~~~n~cgi~~~~~~~~~ 363 (369)
++|||+|||||+||.|+|||++.+++..|
T Consensus 225 ~~WG~~Gy~~i~rg~n~CgI~~~~~~~~p 253 (254)
T 3qsd_A 225 EDWGENGYFRIVRGRDECSIESEVTAGRI 253 (254)
T ss_dssp TTSTBTTEEEEECSSCGGGTTSSEEEEEC
T ss_pred CCcccCCeEEEEcCCCeecCCCceEeecc
Confidence 99999999999999999999999998876
No 37
>3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ...
Probab=100.00 E-value=1.7e-61 Score=446.08 Aligned_cols=216 Identities=29% Similarity=0.591 Sum_probs=181.7
Q ss_pred CCCCCceeccCC----CCCCcccCCCCCccHHHHHhhhHHHHHHhhhcC--CccccChhHhhhcCCCCCCCCCCCCCCCC
Q 017548 135 NDLPTDFDWRDH----GAVTGVKDQGACGSCWSFSATGALEGAHFLSTG--ELVSLSEQQLVDCDHECDPEESGSCDSGC 208 (369)
Q Consensus 135 ~~lP~~~Dwr~~----g~v~pV~dQg~cgsCwAfa~~~~le~~~~~~~~--~~~~lS~q~l~dc~~~~~~~~~~~~~~gC 208 (369)
.+||++||||++ +.|+||||||.||||||||++++||++++|+++ ..+.||+|+|+||+.. .++.||
T Consensus 5 ~~lP~~~D~R~~w~~~~~vt~VkdQg~CGSCWAfa~~~ale~~~~i~~~~~~~~~LS~q~lvdC~~~-------~~~~gC 77 (266)
T 3cbj_A 5 LKLPASFDAREQWPQCPTIKEIRDQGSCGSAWAFGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGS-------MCGDGC 77 (266)
T ss_dssp CCCCSCEEHHHHSTTCGGGGCCCBCCSSBCHHHHHHHHHHHHHHHHHTTTSCCCCBCHHHHHHHCGG-------GGBCTT
T ss_pred CCCCccCcchhccCCCCcCCCCCCCCCcchHHHHHHHHHHHHHHHHHhCCCCccccCHHHHHhhccc-------cCCCCC
Confidence 479999999987 789999999999999999999999999999875 3789999999999852 136899
Q ss_pred CCCChHHHHHHHHHcCCcCC-------CCCcccCC---------CCCCCccCC---------C----C----C-ceEEee
Q 017548 209 NGGLMNSAFEYILKAGGVER-------EKDYPYTG---------TDGGSCKFD---------K----S----K-IAAAVS 254 (369)
Q Consensus 209 ~GG~~~~a~~~~~~~~Gi~~-------e~~yPy~~---------~~~~~c~~~---------~----~----~-~~~~i~ 254 (369)
+||++..|++|+.++ |+++ |.+|||.. .. +.|... . . . ..+.+.
T Consensus 78 ~GG~~~~a~~y~~~~-Gi~~~~~Y~~~e~~~PY~~~~~~~~~~~~~-~~C~~~~~~p~c~~~c~~~~~~~~~~~~~~~~~ 155 (266)
T 3cbj_A 78 NGGYPAEAWNFWTRK-GLVSGGLYESHVGCRPYSIPPCEAHVNGAR-PPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYN 155 (266)
T ss_dssp BCBCHHHHHHHHHHT-CBCBCCSTTCCCSSSCCCSCCCSCCCSCSS-CCCCSCCCCCCCCCSCCTTCCSCTGGGCBCBSC
T ss_pred CCCCHHHHHHHHHHh-CcCcCccccccccccCcccccccccccCCC-CCCccccCCCccccccCCCCcceeeeeeeeeee
Confidence 999999999999887 9999 99999983 23 455321 0 0 0 011222
Q ss_pred eeEecCchHHHHHHHHHhcCCeEEEEEccc-ccccCCCeeecCCCCCcCCeEEEEEEecccCCcCCcCCCCCEEEEEcCC
Q 017548 255 NFSVISSDEDQMAANLVKHGPLAVGINAVW-MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSW 333 (369)
Q Consensus 255 ~~~~~~~~~~~ik~~l~~~gPV~v~~~~~~-f~~y~~Gi~~~~~~~~~~~Hav~iVGyg~~~~~~~~~~~~~ywivkNSW 333 (369)
+..++.++++||++|+++|||+++|++.. |+.|++|||....+...++|||+|||||++ +|++||||||||
T Consensus 156 -~~~v~~~~~~i~~~i~~~GPV~v~i~~~~~f~~Y~~Gvy~~~~~~~~~~HaV~iVGyg~~-------~g~~yWivkNSW 227 (266)
T 3cbj_A 156 -SYSVSNSEKDIMAEIYKNGPVEGAFSVYSDFLLYKSGVYQHVTGEMMGGHAIRILGWGVE-------NGTPYWLVANSW 227 (266)
T ss_dssp -CEECCSCHHHHHHHHHHHCCEEEEEEEEGGGGGCCSSEECCCSSCEEEEEEEEEEEEEEE-------TTEEEEEEECSB
T ss_pred -eEEeCCCHHHHHHHHHhcCCEEEEEEeccchhhcCCeEEecCCCCccCCeEEEEEEeccc-------CCceEEEEEcCC
Confidence 33456689999999999999999999865 999999999865333337999999999987 689999999999
Q ss_pred CCCCCCCcEEEEEeCCCeeccccceeeEEEeccC
Q 017548 334 GENWGENGYYKICMGRNVCGVDSMVSSVAAIHTT 367 (369)
Q Consensus 334 G~~WG~~Gy~~i~~~~n~cgi~~~~~~~~~~~~~ 367 (369)
|++|||+|||||+|+.|.|||++.++++.|.+++
T Consensus 228 G~~WGe~Gy~~i~rg~n~cgI~~~~~~~~p~~~~ 261 (266)
T 3cbj_A 228 NTDWGDNGFFKILRGQDHCGIESEVVAGIPRTDQ 261 (266)
T ss_dssp CTTSTBTTEEEEECSSCGGGTTTSCEECCBCCCC
T ss_pred CCccCCCCEEEEEcCCCcccccCceEEEEeeccc
Confidence 9999999999999999999999999999887764
No 38
>1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A
Probab=100.00 E-value=1.1e-60 Score=442.33 Aligned_cols=211 Identities=29% Similarity=0.632 Sum_probs=186.6
Q ss_pred CCCCCCceeccCC---CCCCcccCCC---CCccHHHHHhhhHHHHHHhhhcC-C--ccccChhHhhhcCCCCCCCCCCCC
Q 017548 134 TNDLPTDFDWRDH---GAVTGVKDQG---ACGSCWSFSATGALEGAHFLSTG-E--LVSLSEQQLVDCDHECDPEESGSC 204 (369)
Q Consensus 134 ~~~lP~~~Dwr~~---g~v~pV~dQg---~cgsCwAfa~~~~le~~~~~~~~-~--~~~lS~q~l~dc~~~~~~~~~~~~ 204 (369)
..+||++||||++ ++|+|||||| .||||||||++++||++++++++ + .++||+|+|+||+.
T Consensus 33 ~~~lP~~~DwR~~~~~~~vtpVkdQg~~~~CGSCWAfa~~~alE~~~~i~~~g~~~~~~LS~Q~lvdC~~---------- 102 (277)
T 1deu_A 33 PADLPKSWDWRNVDGVNYASITRNQHIPQYCGSCWAHASTSAMADRINIKRKGAWPSTLLSVQNVIDCGN---------- 102 (277)
T ss_dssp GGGSCSCEETTSBTTBCCCCCCCBTTCSSCCBCHHHHHHHHHHHHHHHHHTTTCSSCCCBCHHHHHHHSS----------
T ss_pred cccCCCceecccCCCCCcCCccccCCCCCCCcchHHHHHHHHHHHHHHHHhCCCCCCcccCHHHHHhCcC----------
Confidence 4579999999998 6899999999 99999999999999999999875 3 47899999999985
Q ss_pred CCCCCCCChHHHHHHHHHcCCcCCCCCcccCCCCCCCccC-C--------------CCCceEEeeeeEecCchHHHHHHH
Q 017548 205 DSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKF-D--------------KSKIAAAVSNFSVISSDEDQMAAN 269 (369)
Q Consensus 205 ~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPy~~~~~~~c~~-~--------------~~~~~~~i~~~~~~~~~~~~ik~~ 269 (369)
..||+||++..|++|+.++ |+++|++|||.+.+ +.|+. + .....+++..|..++ ++++||++
T Consensus 103 ~~gC~GG~~~~a~~yi~~~-Gi~~e~~yPY~~~~-~~C~~~~~~~~~~~~~~c~~~~~~~~~~i~~y~~v~-~~~~i~~~ 179 (277)
T 1deu_A 103 AGSCEGGNDLSVWDYAHQH-GIPDETCNNYQAKD-QECDKFNQCGTCNEFKECHAIRNYTLWRVGDYGSLS-GREKMMAE 179 (277)
T ss_dssp SEETBEECHHHHHHHHHHT-CBCBGGGSCCCSSC-CCCCHHHHSEEEEETTEEEECSSCCCBCEEEEEEEC-SHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHc-CCCcCccCCCcCCC-CCccccccccccccCcccccccCcceEEeceeEecC-CHHHHHHH
Confidence 4799999999999999887 99999999999887 77873 1 112345667777775 58899999
Q ss_pred HHhcCCeEEEEEccc-ccccCCCeeecCCCCCcCCeEEEEEEecccCCcCCcCCCCCEEEEEcCCCCCCCCCcEEEEEeC
Q 017548 270 LVKHGPLAVGINAVW-MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMG 348 (369)
Q Consensus 270 l~~~gPV~v~~~~~~-f~~y~~Gi~~~~~~~~~~~Hav~iVGyg~~~~~~~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~ 348 (369)
|+++|||+++|++.. |+.|++|||....|...++|||+|||||++ ++++|||||||||++|||+|||||+|+
T Consensus 180 i~~~GPV~v~i~~~~~f~~Y~~GIy~~~~~~~~~~HaV~iVGyg~~-------~g~~YWivkNSWG~~WGe~GY~~i~rg 252 (277)
T 1deu_A 180 IYANGPISCGIMATERLANYTGGIYAEYQDTTYINHVVSVAGWGIS-------DGTEYWIVRNSWGEPWGERGWLRIVTS 252 (277)
T ss_dssp HHHHCCEEEEECCCHHHHTCCSSEECBCCSCCCCCEEEEEEEEEEE-------TTEEEEEEECSBCTTSTBTTEEEEECT
T ss_pred HHHcCCEEEEEecccccccCcCcEECCCCCCCcCCeEEEEEEeccc-------CCccEEEEEeCCCCccCCCcEEEEEcC
Confidence 999999999999875 999999999877666669999999999987 689999999999999999999999999
Q ss_pred CC--------eeccccceeeEEEe
Q 017548 349 RN--------VCGVDSMVSSVAAI 364 (369)
Q Consensus 349 ~n--------~cgi~~~~~~~~~~ 364 (369)
.| .||||+.++++.|.
T Consensus 253 ~n~~g~g~~~~cgIe~~~~~~~p~ 276 (277)
T 1deu_A 253 TYKDGKGARYNLAIEEHCTFGDPI 276 (277)
T ss_dssp THHHHTGGGTBTTTTSCEEEEEEC
T ss_pred CCcccccccccceeccccEeeccc
Confidence 98 99999999998875
No 39
>2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X
Probab=100.00 E-value=2.8e-56 Score=411.66 Aligned_cols=217 Identities=26% Similarity=0.492 Sum_probs=173.1
Q ss_pred CceeccCC-CCCC--cccCCCCCccHHHHHhhhHHHHHHhhhcCCccccChhHhhhcCCCCCCCCCCCCCCCCCCCChH-
Q 017548 139 TDFDWRDH-GAVT--GVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMN- 214 (369)
Q Consensus 139 ~~~Dwr~~-g~v~--pV~dQg~cgsCwAfa~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~~~~~~~~~gC~GG~~~- 214 (369)
...|||++ |+++ ||||||.||||||||++++||+++++++++.+.||+|+|+||+.. .++.||+||...
T Consensus 9 ~~~dWR~~~~~~~it~VkdQg~CGSCWAFaa~~alE~~~~i~~~~~~~LS~Q~lvdC~~~-------~~~~GC~GG~~~~ 81 (265)
T 2wbf_X 9 YCNRLKDENNCISNLQVEDQGNCDTSWIFASKYHLETIRCMKGYEPTKISALYVANCYKG-------EHKDRCDEGSSPM 81 (265)
T ss_dssp CBCGGGCTTSTGGGSCCCBCTTSSCHHHHHHHHHHHHHHHHTTCCCCCBCHHHHHHCCSS-------SCCCTTTCCCCHH
T ss_pred HHHhhccCCCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHhhcc-------cCCCCCCCCCCHH
Confidence 46799999 6877 999999999999999999999999999999999999999999864 247899999654
Q ss_pred HHHHHHHHcCCcCCCCCcccCCCC-CCCccCCCC-----------------CceEEeeeeEecCc-----h----HHHHH
Q 017548 215 SAFEYILKAGGVEREKDYPYTGTD-GGSCKFDKS-----------------KIAAAVSNFSVISS-----D----EDQMA 267 (369)
Q Consensus 215 ~a~~~~~~~~Gi~~e~~yPy~~~~-~~~c~~~~~-----------------~~~~~i~~~~~~~~-----~----~~~ik 267 (369)
.++.|+.+++|+++|++|||.+.. .+.|+.... ...+++.+|..++. + +++||
T Consensus 82 ~~~~~i~~~Ggi~~e~~yPY~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~ik 161 (265)
T 2wbf_X 82 EFLQIIEDYGFLPAESNYPYNYVKVGEQCPKVEDHWMNLWDNGKILHNKNEPNSLDGKGYTAYESERFHDNMDAFVKIIK 161 (265)
T ss_dssp HHHHHHHHHCCCCBTTTSCCCGGGTTSCCCCCCTTCCCTTTTCEECCCCCSSSTTCCSSEEEEEGGGGTTCHHHHHHHHH
T ss_pred HHHHHHHHcCCCCCccccCCcCCCCCCCCCCccccccccccccccccccCCCceeecCCceEeeccccccchhhHHHHHH
Confidence 555777778669999999998631 267875422 11245667766643 2 47899
Q ss_pred HHHHhcCCeEEEEEcccccccC-CCeeecCCCCC-cCCeEEEEEEecccCCcCCcCCC--CCEEEEEcCCCCCCCCCcEE
Q 017548 268 ANLVKHGPLAVGINAVWMQTYI-GGVSCPYICGK-YLDHGVLIVGYGSSGFAPIRFKE--KPYWIIKNSWGENWGENGYY 343 (369)
Q Consensus 268 ~~l~~~gPV~v~~~~~~f~~y~-~Gi~~~~~~~~-~~~Hav~iVGyg~~~~~~~~~~~--~~ywivkNSWG~~WG~~Gy~ 343 (369)
++|+++|||+++|++..|+.|+ +|++....|+. .++|||+|||||++.. .+| ++|||||||||++|||+|||
T Consensus 162 ~~i~~~GPV~v~i~~~~f~~y~~~g~~~~~~c~~~~~~HaV~iVGyG~~~~----~~g~~~~YWivkNSWG~~WGe~GY~ 237 (265)
T 2wbf_X 162 TEVMNKGSVIAYIKAENVMGYEFSGKKVKNLCGDDTADHAVNIVGYGNYVN----SEGEKKSYWIVRNSWGPYWGDEGYF 237 (265)
T ss_dssp HHHHHHSCEEEEECGGGGCSGGGGSSSEECCCCCSCCCEEEEEEEEEEEEC----TTSCEEEEEEEECSBCTTSTBTTEE
T ss_pred HHHHhcCCEEEEEEcccccccccCCcEEcCCCCCCcCCEEEEEEEEeCCcc----cCCCcCCEEEEEcCCCCccCCCCEE
Confidence 9999999999999986676664 55544346875 4899999999998410 034 68999999999999999999
Q ss_pred EEEe-CCCeeccccceeeEEEecc
Q 017548 344 KICM-GRNVCGVDSMVSSVAAIHT 366 (369)
Q Consensus 344 ~i~~-~~n~cgi~~~~~~~~~~~~ 366 (369)
||+| +.|+|||++.+.++.+.+.
T Consensus 238 ri~~~g~n~Cgi~~~~~~~~~~~~ 261 (265)
T 2wbf_X 238 KVDMYGPTHCHFNFIHSVVIFNVD 261 (265)
T ss_dssp EEESSCCTTCSSCSCCEEEEECEE
T ss_pred EEEecCCCccCcceeEEEEecccc
Confidence 9987 5789999999988877653
No 40
>3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa}
Probab=100.00 E-value=2.1e-53 Score=396.86 Aligned_cols=236 Identities=21% Similarity=0.268 Sum_probs=177.3
Q ss_pred CeeeeeccCCCCChHHHHhhhcCCccCCCCCCCCCCCCCCC-CCCCCCceeccCCCCCCcccCCCCCccHHHHHhhhHHH
Q 017548 93 TAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILP-TNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALE 171 (369)
Q Consensus 93 s~~~giN~FaDlt~~Ef~~~~~~~~~~~~~~~~~~~~~~~~-~~~lP~~~Dwr~~g~v~pV~dQg~cgsCwAfa~~~~le 171 (369)
...-..|++.++..+.++.. +|..++..........+... ..+||++||||+++ ||||||.||||||||+++++|
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~-lG~~p~~~d~rd~~~~~~~~~~~~lP~s~DwR~~~---pVkdQG~CGSCWAFAa~~alE 88 (291)
T 3ois_A 13 GLVPRGSHMQTVLKRRKKSG-YGYIPDIADIRDFSYTPEKSVIAALPPKVDLTPPF---QVYDQGRIGSCTANALAAAIQ 88 (291)
T ss_dssp ----------CCCCCCCCTT-CCEECCCCCTTCCBCCCCHHHHHTCCSEEECCCSS---CCCBCTTSSCHHHHHHHHHHH
T ss_pred CcccchhhHhHhhhcccccc-CCCCCCCCcccccccCCCccccccCCcceecccCC---CcccCCCCccHHHHHHHHHHH
Confidence 34556788888887877654 45554322111111111111 24799999999984 999999999999999999999
Q ss_pred HHHhhhcCCccccChhHhh--hcCCCCCCCCCCCCCCCCCCCChHHHHHHHHHcCCcCCCCCcccCCCC--CCCccCCC-
Q 017548 172 GAHFLSTGELVSLSEQQLV--DCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTD--GGSCKFDK- 246 (369)
Q Consensus 172 ~~~~~~~~~~~~lS~q~l~--dc~~~~~~~~~~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPy~~~~--~~~c~~~~- 246 (369)
++++ ++++.+.||+|+|+ +|..... .+..+|.||++..|++|+.++ ||++|++|||.+.. .+.|++.+
T Consensus 89 ~~~~-~~g~~~~lS~q~l~~~~c~~~~~-----~~~~~c~GG~~~~A~~yi~~~-Gi~~e~~yPY~~~~~~~~~C~~~~~ 161 (291)
T 3ois_A 89 FERI-HDKQSPEFIPSRLFIYYNERKIE-----GHVNYDSGAMIRDGIKVLHKL-GVCPEKEWPYGDTPADPRTEEFPPG 161 (291)
T ss_dssp HHHH-HTTCSSCCCBCHHHHHHHHHHHS-----SCTTSCCCEEHHHHHHHHHHT-CCCBGGGSCCCCCCCCTTTCSCCTT
T ss_pred HHHH-HhCCCCCcCcCHHHHHhhhhhhh-----cCCCCCCCcCHHHHHHHHHHh-CCCCHhhCCCCCCcccccccccccc
Confidence 9875 46777899999998 6763200 113468999999999999888 99999999999863 14565521
Q ss_pred -------------CCceEEeeeeEecCchHHHHHHHHHhcCCeEEEEEccc-ccccCC--CeeecCCCCCc--CCeEEEE
Q 017548 247 -------------SKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW-MQTYIG--GVSCPYICGKY--LDHGVLI 308 (369)
Q Consensus 247 -------------~~~~~~i~~~~~~~~~~~~ik~~l~~~gPV~v~~~~~~-f~~y~~--Gi~~~~~~~~~--~~Hav~i 308 (369)
....+++++|..++.++++||++|+++|||+++|++.. |+.|++ |||..+.|... ++|||+|
T Consensus 162 ~~~~~~p~~~C~~~~~~~~i~~y~~v~~~e~~i~~al~~~gPV~v~~~~~~~f~~y~~~~Gi~~~~~~~~~~~~~Hav~i 241 (291)
T 3ois_A 162 APASKKPSDQCYKDAQNYKITEYSRVAQDIDHLKACLAVGSPFVFGFSVYNSWVGNNSLPVRIPLPTKNDTLEGGHAVLC 241 (291)
T ss_dssp CGGGSCCCHHHHHHHGGGCCCEEEECCSCHHHHHHHHHTTCCEEEEEEEEHHHHGGGCCCSBCCCCCTTSCEEEEEEEEE
T ss_pred ccccCCCCHHHHhhcccceeccEEEcCcCHHHHHHHHHcCCCEEEEEEeccchhhcCCCCeEEeCCCCCCCCcCCeEEEE
Confidence 12346788999998899999999999999999999875 889998 99987777543 6999999
Q ss_pred EEecccCCcCCcCCCCCEEEEEcCCCCCCCCCcEEEEEeC
Q 017548 309 VGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMG 348 (369)
Q Consensus 309 VGyg~~~~~~~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~ 348 (369)
||||+ +++|||||||||++|||+|||||+|+
T Consensus 242 VGy~~---------~~~ywivkNSWG~~WG~~Gy~~i~~~ 272 (291)
T 3ois_A 242 VGYDD---------EIRHFRIRNSWGNNVGEDGYFWMPYE 272 (291)
T ss_dssp EEEET---------TTTEEEEECSBCTTSTBTTEEEEEHH
T ss_pred EEEeC---------CCCEEEEEeCCCCCCCCCcEEEEEHH
Confidence 99983 47899999999999999999999997
No 41
>2cb5_A Protein (bleomycin hydrolase); aminopeptidase, cysteine protease, SELF- compartmentalizing, cylinase; 1.85A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cb5_A
Probab=100.00 E-value=1.1e-42 Score=336.38 Aligned_cols=216 Identities=20% Similarity=0.293 Sum_probs=162.2
Q ss_pred CCCceeccCCCCCCcccCCCCCccHHHHHhhhHHHHHHhhh-cCCccccCh----------------hHhhhcCCCCCCC
Q 017548 137 LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLS-TGELVSLSE----------------QQLVDCDHECDPE 199 (369)
Q Consensus 137 lP~~~Dwr~~g~v~pV~dQg~cgsCwAfa~~~~le~~~~~~-~~~~~~lS~----------------q~l~dc~~~~~~~ 199 (369)
.|..|+++....++||+|||.||+|||||+++++|+.++++ +++.++||+ |+|+||+....+.
T Consensus 48 ~~~~F~~~~~~~~tpVknQg~cGsCWaFs~~~~le~~~~~k~~~~~~~lSe~yl~fwDKlEkan~flq~lidc~~~~~~~ 127 (453)
T 2cb5_A 48 AQHVFQHAVPQEGKPITNQKSSGRSWIFSCLNVMRLPFMKKLNIEEFEFSQSYLFFWDKVERCYFFLSAFVDTAQRKEPE 127 (453)
T ss_dssp CCCCCSEECSCCCSSCCBCCBSSCHHHHHHHHHHHHHHHHHTTCSCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCT
T ss_pred CCCceeeeeccCCCCcccCCCccchHhhhhHHHHHHHHHHHhcCCeEeeChHHHHHHHHHHHhhHHHHHHHHHHhccCCc
Confidence 46678888888899999999999999999999999999998 578899999 9999997420000
Q ss_pred CC-----CCCCCCCCCCChHHHHHHHHHcCCcCCCCCcccCCCCC--------------------------C------C-
Q 017548 200 ES-----GSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDG--------------------------G------S- 241 (369)
Q Consensus 200 ~~-----~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPy~~~~~--------------------------~------~- 241 (369)
.. -..+.||+||.+..++.++.++ |++++++|||+.... + .
T Consensus 128 d~R~v~~l~~~~gcdGG~~~~a~~~i~ky-Gl~p~~~yP~~~~s~ns~~mn~~L~~kLr~~a~~LR~~~~~g~~~~~l~~ 206 (453)
T 2cb5_A 128 DGRLVQFLLMNPANDGGQWDMLVNIVEKY-GVIPKKCFPESYTTEATRRMNDILNHKMREFCIRLRNLVHSGATKGEISA 206 (453)
T ss_dssp TSHHHHHHHHCTTCSCBCHHHHHHHHHHH-CCCBGGGSCCCTGGGBCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred chhhHHHhcCCCCCCCCChHHHHHHHHHc-CccchhhccccccccchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHH
Confidence 00 0026899999999999999876 999999999986310 1 1
Q ss_pred ---------------c----------cC-CCCC-----------------ceE--EeeeeE-------------------
Q 017548 242 ---------------C----------KF-DKSK-----------------IAA--AVSNFS------------------- 257 (369)
Q Consensus 242 ---------------c----------~~-~~~~-----------------~~~--~i~~~~------------------- 257 (369)
| .. +..+ ... .+.+|.
T Consensus 207 ~k~~~l~~iy~il~~clG~pP~~F~~~~~dkd~~~~~~~~~TP~~F~~~~~~~~~~~~~yv~l~n~p~~~~py~~~y~v~ 286 (453)
T 2cb5_A 207 TQDVMMEEIFRVVCICLGNPPETFTWEYRDKDKNYEKIGPITPLEFYREHVKPLFNMEDKICLVNDPRPQHKHNKLYTVE 286 (453)
T ss_dssp HHHHHHHHHHHHHHHHHCCCCSSEEEEEECTTSCEEEEEEECHHHHHHHHTTTTSCGGGEEEEECCCCTTSCSSEEEEET
T ss_pred HHHHHHHHHHHHHHHHcCCCCceeeEEEEccCCcccccCCCCHHHHHHHhcCCcCCCCCeEEEecCCCCcCcccceeEEe
Confidence 4 22 0000 000 222232
Q ss_pred --------------ecCchH--HHHHHHHHhcCCeEEEEEcccccccCCCeeecCCC----------------------C
Q 017548 258 --------------VISSDE--DQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYIC----------------------G 299 (369)
Q Consensus 258 --------------~~~~~~--~~ik~~l~~~gPV~v~~~~~~f~~y~~Gi~~~~~~----------------------~ 299 (369)
+++.++ +.++.+|.++|||++++++..+.++++|||.+..| .
T Consensus 287 ~~~Nv~~g~~~~y~Nvp~~~l~~~~~~al~~g~PV~~~~Dv~~~~~~k~GI~~~~~~~~~~~fg~~~~~m~KaeRl~~~~ 366 (453)
T 2cb5_A 287 YLSNMVGGRKTLYNNQPIDFLKKMVAASIKDGEAVWFGCDVGKHFNSKLGLSDMNLYDHELVFGVSLKNMNKAERLTFGE 366 (453)
T ss_dssp TCCSSTTCCCCCEEECCHHHHHHHHHHHHHTTCCEEEEECTTTTEETTTTEECTTSBCHHHHHSCCSCSSCHHHHHHTTS
T ss_pred ecCcccccccccccccCHHHHHHHHHHHHHcCCCEEEEEEeChhhccCCcEEcCccccchhhcCccccccCHHHHhhccC
Confidence 334332 45668888899999999998766779999987655 2
Q ss_pred CcCCeEEEEEEec--ccCCcCCcCCCC-CEEEEEcCCCCCCCCCcEEEEEeCCCeeccccceeeEEE
Q 017548 300 KYLDHGVLIVGYG--SSGFAPIRFKEK-PYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAA 363 (369)
Q Consensus 300 ~~~~Hav~iVGyg--~~~~~~~~~~~~-~ywivkNSWG~~WG~~Gy~~i~~~~n~cgi~~~~~~~~~ 363 (369)
+..+|||+||||| .+. +|+ +|||||||||++||++|||+|+|+ .++.+++.+.+
T Consensus 367 s~~~HAmlivGyg~~~d~------~G~~~yWiVkNSWG~~wG~~GY~~ms~~----wf~ey~~~vvV 423 (453)
T 2cb5_A 367 SLMTHAMTFTAVSEKDDQ------DGAFTKWRVENSWGEDHGHKGYLCMTDE----WFSEYVYEVVV 423 (453)
T ss_dssp CCCCEEEEEEEEEECTTS------CSCEEEEEEECSBCTTSTBTTEEEEEHH----HHHHHEEEEEE
T ss_pred CCCCeEEEEEEecccccc------CCCccEEEEEcCcCCCcCcCceEEechh----hHhhceEEEEe
Confidence 3479999999999 542 577 899999999999999999999985 56666665544
No 42
>2e01_A Cysteine proteinase 1; bleomycin hydrolase, thiol protease, C1 protease, hydrolase; 1.73A {Saccharomyces cerevisiae} PDB: 2e02_A 2e03_A 2dzy_A 1a6r_A 2e00_A 2dzz_A 3gcb_A 1gcb_A
Probab=100.00 E-value=1.6e-41 Score=328.63 Aligned_cols=214 Identities=18% Similarity=0.226 Sum_probs=149.7
Q ss_pred CCCceeccCCCCCCcccCCCCCccHHHHHhhhHHHHHHhhh-cCCccccCh----------------hHhhhcCCCCCCC
Q 017548 137 LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLS-TGELVSLSE----------------QQLVDCDHECDPE 199 (369)
Q Consensus 137 lP~~~Dwr~~g~v~pV~dQg~cgsCwAfa~~~~le~~~~~~-~~~~~~lS~----------------q~l~dc~~~~~~~ 199 (369)
.|..|+|+..+.++||||||.||+|||||+++++|+.++++ +++.++||+ |+|+||+... .
T Consensus 53 ~~~~F~~~~~~~vtpVknQg~cGsCWaFs~~~~lE~~~~~~~~~~~~~LSe~yl~~~dklEkan~flq~lvdc~~~~--~ 130 (457)
T 2e01_A 53 DNRVFNTVVSTDSTPVTNQKSSGRCWLFAATNQLRLNVLSELNLKEFELSQAYLFFYDKLEKANYFLDQIVSSADQD--I 130 (457)
T ss_dssp CCCCCSEECC------------CCHHHHHHHHHHHHHHHHHTTCSSCCBCHHHHHHHHHHHHHHHHHHHHHHTTTSC--T
T ss_pred CCCceEEEecCCccCcccCCCCccchhHHhHHHHHHHHHHHhCCCceeeCChhhhhhhHHHHHHHHHHHHHHhcCCc--c
Confidence 46678888888899999999999999999999999999998 888899999 7889997520 0
Q ss_pred CCC-----CCCCCCCCCChHHHHHHHHHcCCcCCCCCccc-CCC------------------------------C--C--
Q 017548 200 ESG-----SCDSGCNGGLMNSAFEYILKAGGVEREKDYPY-TGT------------------------------D--G-- 239 (369)
Q Consensus 200 ~~~-----~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPy-~~~------------------------------~--~-- 239 (369)
... ..+.||+||.+..++.++.++ |++++++||| +.. . .
T Consensus 131 ~~r~v~~l~~~~gcdGG~~~~a~~~i~ky-Givpe~~yP~~s~~s~ns~~~n~~L~~kLr~~a~~lR~~~~~~~~~~~~l 209 (457)
T 2e01_A 131 DSRLVQYLLAAPTEDGGQYSMFLNLVKKY-GLIPKDLYGDLPYSTTASRKWNSLLTTKLREFAETLRTALKERSADDSII 209 (457)
T ss_dssp TSHHHHHHHHCTTCSCBCHHHHHHHHHHH-CCCBGGGSCSCSHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHSCTTSHHH
T ss_pred cchhhhhhccCCCCCCCCHHHHHHHHHHc-CccchhhcCCcccCcccHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhH
Confidence 000 027899999999999999876 9999999999 310 0 0
Q ss_pred -------------------CCccC----------------------------------CCCC-------------ceEEe
Q 017548 240 -------------------GSCKF----------------------------------DKSK-------------IAAAV 253 (369)
Q Consensus 240 -------------------~~c~~----------------------------------~~~~-------------~~~~i 253 (369)
+.|+. +... ..+.+
T Consensus 210 ~~~~~~~l~~iy~il~~~LG~pP~~~~~~F~~~~~dkd~~~~~~~~TP~~F~~~~v~~~~~dyV~l~n~p~~py~~~y~v 289 (457)
T 2e01_A 210 VTLREQMQREIFRLMSLFMDIPPVQPNEQFTWEYVDKDKKIHTIKSTPLEFASKYAKLDPSTPVSLINDPRHPYGKLIKI 289 (457)
T ss_dssp HHHHHHHHHHHHHHHHHHSCCCSSCTTSCEEEEEECTTSCEEEEEECHHHHHHHTTCCCTTSEEEEECCTTSCTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCCCceEEEEEEcCCCCccCCCcChHHHHHHHcCCCchheEEEeecCCCccCeeEEE
Confidence 00110 0000 00111
Q ss_pred e-----------eeEecCchH--HHHHHHHHhcCCeEEEEEcccccccCCCeeecCCC--------------------CC
Q 017548 254 S-----------NFSVISSDE--DQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYIC--------------------GK 300 (369)
Q Consensus 254 ~-----------~~~~~~~~~--~~ik~~l~~~gPV~v~~~~~~f~~y~~Gi~~~~~~--------------------~~ 300 (369)
. .|.+++.++ +.++.+|..+|||++++++..+.+|++||+.+..| .+
T Consensus 290 e~~~N~~~g~~~~y~Nvp~d~l~~~~~~aL~~g~PV~~~~Dv~~~~~~~~GI~~~~~~~~~~fg~~~~m~KaeRl~~~~s 369 (457)
T 2e01_A 290 DRLGNVLGGDAVIYLNVDNETLSKLVVKRLQNNKAVFFGSHTPKFMDKKTGVMDIELWNYPAIGYNLPQQKASRIRYHES 369 (457)
T ss_dssp TTCCSSTTCCCEEEEECCHHHHHHHHHHHHHTTCCEEEEECTTTTEETTTTEECTTSBCGGGGTCCCCCCHHHHHHTTSC
T ss_pred eccCCeecCCceeEEEcCHHHHHHHHHHHHHhCCCEEEEEEcCHhHcccCceecccccchhhcCcccccCHHHhhccCCC
Confidence 0 144455443 56678888899999999998877899999976542 23
Q ss_pred cCCeEEEEEEecccCCcCCcCCCC--CEEEEEcCCCCCCCCCcEEEEEeCCCeeccccceeeEEE
Q 017548 301 YLDHGVLIVGYGSSGFAPIRFKEK--PYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAA 363 (369)
Q Consensus 301 ~~~Hav~iVGyg~~~~~~~~~~~~--~ywivkNSWG~~WG~~Gy~~i~~~~n~cgi~~~~~~~~~ 363 (369)
..+|||+|||||.+. +|+ +|||||||||++||++|||+|+|+ .++.+++.+.+
T Consensus 370 ~~~HAmlivGyg~d~------~G~~p~yW~VkNSWG~~wG~~GY~~ms~~----wf~ey~~~ivV 424 (457)
T 2e01_A 370 LMTAAMLITGCHVDE------TSKLPLRYRVENSWGKDSGKDGLYVMTQK----YFEEYCFQIVV 424 (457)
T ss_dssp CCCEEEEEEEEEECT------TTCCEEEEEEECSSCTTSTBTTEEEEEHH----HHHHHEEEEEE
T ss_pred CCCeEEEEEEEEecc------CCCccCEEEEEeCccCCcCCCceEEeehh----hHhhccEEEEe
Confidence 489999999999752 577 899999999999999999999995 56666665544
No 43
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis}
Probab=100.00 E-value=1.6e-35 Score=280.85 Aligned_cols=194 Identities=22% Similarity=0.226 Sum_probs=135.9
Q ss_pred CCCcccCCCCCccHHHHHhhhHHHHHHhhhcCCccccChhHhhhcCCCCCCC---CCCCCCCCCCCCChHHHHHHHHHcC
Q 017548 148 AVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPE---ESGSCDSGCNGGLMNSAFEYILKAG 224 (369)
Q Consensus 148 ~v~pV~dQg~cgsCwAfa~~~~le~~~~~~~~~~~~lS~q~l~dc~~~~~~~---~~~~~~~gC~GG~~~~a~~~~~~~~ 224 (369)
.++||||||.||+|||||+++++|+.+++++++.++||+|+|++|+...... .....+.||+||.+..|+.|+.++
T Consensus 21 ~vtpVknQg~cGsCWaFSa~~~lE~~~~~k~~~~~~LSeq~Lvdcd~~ekan~~l~~~g~~~gcdGG~~~~a~~~i~k~- 99 (383)
T 3pw3_A 21 PITSVKNQNRAGTCWCYSSYSFLESELLRMGKGEYDLSEMFTVYNTYLDRADAAVRTHGDVSFSQGGSFYDALYGMETF- 99 (383)
T ss_dssp CCCCCCBCCBSSCHHHHHHHHHHHHHHHHTTCCCCCBCHHHHHHHHHHHHHHHHHHTTTCSCCCSCCCHHHHHHHHHHT-
T ss_pred CCCCcccCCCCcHHHHHHhHHHHHHHHHHHcCCCCccChHHHHhhchhhhhhhhhhhccCCCCCCCCCHHHHHHHHHHc-
Confidence 3899999999999999999999999999999999999999999997410000 000125799999999999999887
Q ss_pred CcCCCCCcc------cCCCC----------------CC-CccC-------------------------------------
Q 017548 225 GVEREKDYP------YTGTD----------------GG-SCKF------------------------------------- 244 (369)
Q Consensus 225 Gi~~e~~yP------y~~~~----------------~~-~c~~------------------------------------- 244 (369)
||+++++|| +.... .. .-+.
T Consensus 100 Givpe~~YP~~~~~~~~s~n~~~m~~~L~~~Lr~~a~~~~r~l~~~~~~~~~~~~~i~~il~~~LG~pP~~F~~~gk~~T 179 (383)
T 3pw3_A 100 GLVPEEEMRPGMMYADTLSNHTELSALTDAMVAAIAKGKLRKLQSDENNAMLWKKAVAAVHQIYLGVPPEKFTYKGKEYT 179 (383)
T ss_dssp CCCBGGGSCTTGGGTCSSCBCHHHHHHHHHHHHHHHSSCCSSCCBCTTCCBHHHHHHHHHHHHHHCCCCSSEEETTEEEC
T ss_pred CcCcHHhCCCCCCCCccchhHHHHHHHHHHHHHHHHHHHhhhhhhchhhHHHHHHHHHHHHHHHhCCCCceEEecCCCcC
Confidence 999999999 22111 00 0000
Q ss_pred --------------------CCCC---ceEEe--------eeeEecCch--HHHHHHHHHhcCCeEEEEEcccccccCCC
Q 017548 245 --------------------DKSK---IAAAV--------SNFSVISSD--EDQMAANLVKHGPLAVGINAVWMQTYIGG 291 (369)
Q Consensus 245 --------------------~~~~---~~~~i--------~~~~~~~~~--~~~ik~~l~~~gPV~v~~~~~~f~~y~~G 291 (369)
++.. ..+.+ ..|.+++.+ .+.+..+|.++-||..+-++....+-+.|
T Consensus 180 P~~F~~~v~~~~~dyV~l~n~p~~py~~~y~ve~~~N~~~g~~~Nvp~d~l~~~~~~~Lk~G~~V~fg~DV~~~~f~~~G 259 (383)
T 3pw3_A 180 PKSFFESTGLKASDYVSLTSYTHHPFYTQFPLEIQDNWRHGMSYNLPLDEFMEVFDNAINTGYTIAWGSDVSESGFTRDG 259 (383)
T ss_dssp HHHHHHHHTCCGGGEEEEECCSSSCTTCEEECCCTTCTTCCEEEECCHHHHHHHHHHHHHTTCCEEEEEECCSTTBCTTS
T ss_pred HHHHHHHhCCCccceEEEeeCCCCccCceEEEecCCCccCCccCCcCHHHHHHHHHHHHHcCCcEEEEcccCccccCCCc
Confidence 0000 00011 012233322 23445566667799999999862233889
Q ss_pred eeecCC-------------------------------------------C---CCcCCeEEEEEEecccCCcCCcCCCCC
Q 017548 292 VSCPYI-------------------------------------------C---GKYLDHGVLIVGYGSSGFAPIRFKEKP 325 (369)
Q Consensus 292 i~~~~~-------------------------------------------~---~~~~~Hav~iVGyg~~~~~~~~~~~~~ 325 (369)
|...+. . .+..+|||+|||||.+. +|++
T Consensus 260 i~~~~~~~~~~~~~g~~~~~~~~~~kaer~~~~~~~~e~~~tk~~R~~~~d~~~t~~~Ha~~ivG~~~d~------~g~~ 333 (383)
T 3pw3_A 260 VAVMPDDEKVQELSGSDMAHWLKLKPEEKKLNTKPQPQKWCTQAERQLAYDNYETTDDHGMQIYGIAKDQ------EGNE 333 (383)
T ss_dssp EECCBCHHHHHHHSSCCHHHHHTSCHHHHCTTTSCCCBCCCCHHHHHHHHHTTSSCCEEEEEEEEEEECT------TCCE
T ss_pred eeeCcchhhHHHhcCcchhhhccCCHHHhhhccCCCcccCCCHHHHHHHhhhccCcCCeEEEEEEEEEcC------CCce
Confidence 873210 0 12257999999999752 6789
Q ss_pred EEEEEcCCCCCCCCCcEEEEEeC
Q 017548 326 YWIIKNSWGENWGENGYYKICMG 348 (369)
Q Consensus 326 ywivkNSWG~~WG~~Gy~~i~~~ 348 (369)
|||||||||++||++||++|+++
T Consensus 334 yw~vkNSWg~~~g~~Gy~~m~~~ 356 (383)
T 3pw3_A 334 YYMVKNSWGTNSKYNGIWYASKA 356 (383)
T ss_dssp EEEEECSBCSCSTTTTEEEEEHH
T ss_pred EEEEEeCCCCCCCcCCeEEecHH
Confidence 99999999999999999999974
No 44
>3f75_P Toxopain-2, cathepsin L propeptide; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii}
Probab=99.74 E-value=3.9e-18 Score=132.90 Aligned_cols=78 Identities=31% Similarity=0.498 Sum_probs=69.4
Q ss_pred CchhhhhcHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeeeccCCCCChHHHHhhhcCCcc
Q 017548 41 QSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNR 118 (369)
Q Consensus 41 ~~~~~~~~~~~~f~~f~~~~~k~Y~~~~e~~~R~~iF~~N~~~I~~~N~~~~s~~~giN~FaDlt~~Ef~~~~~~~~~ 118 (369)
+.+......+..|++|+++|+|.|.+.+|+.+|+.||++|++.|++||+.+.+|++|+|+|+|||.+||++.++|.+.
T Consensus 13 ~~~~~~~~~~~~F~~wk~~~~K~Y~~~~E~~~R~~iF~~Nl~~I~~hN~~~~sy~lglN~FaDLT~eEF~~~~lg~~~ 90 (106)
T 3f75_P 13 IWEWKEAHFQDAFSSFQAMYAKSYATEEEKQRRYAIFKNNLVYIHTHNQQGYSYSLKMNHFGDLSRDEFRRKYLGFKK 90 (106)
T ss_dssp ---CCHHHHHHHHHHHHHHHTCCCSSHHHHHHHHHHHHHHHHHHHHHHTSCCSEEECCCTTTTCCHHHHHHHSCCBCC
T ss_pred hhccCcHHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCCeeeCCcccccCCHHHHHHHHcCCCC
Confidence 344555667789999999999999998999999999999999999999888899999999999999999999988765
No 45
>2l95_A Crammer, LP06209P; cysteine proteinase inhibitor, intrinsic disorder P like protein, hydrolase; NMR {Drosophila melanogaster}
Probab=99.68 E-value=3.9e-17 Score=121.66 Aligned_cols=68 Identities=29% Similarity=0.478 Sum_probs=61.1
Q ss_pred HHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHhcCC----CCCeeeeeccCCCCChHHHHhhhcCCcc
Q 017548 49 AEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLL----DPTAVHGVTKFSDLTPSEFRRQFLGLNR 118 (369)
Q Consensus 49 ~~~~f~~f~~~~~k~Y~~~~e~~~R~~iF~~N~~~I~~~N~~----~~s~~~giN~FaDlt~~Ef~~~~~~~~~ 118 (369)
.+..|+.|+.+|+|+|.+.+|+.+| .||++|++.|++||.. ..+|++|+|+|+|||++|| +.++|.+.
T Consensus 6 ~~~~f~~~k~~~~K~Y~~~~E~~~R-~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlT~eEf-~~~~g~~~ 77 (80)
T 2l95_A 6 SDEEWVEYKSKFDKNYEAEEDLMRR-RIYAESKARIEEHNRKFEKGEVTWKMGINHLADLTPEEF-AQRSGKKV 77 (80)
T ss_dssp CHHHHHHHHHHHTCCCCHHHHHHHH-HHHHHHHHHHHHHHTTGGGTSCCCCCCCCGGGTSSHHHH-HHHHTSCC
T ss_pred HHHHHHHHHHHhCCCCCCHHHHHHH-HHHHHHHHHHHHHHHHhccCCCCeEecCcccccCCHHHH-HHHhCCCC
Confidence 4568999999999999988899999 9999999999999975 3589999999999999999 88887653
No 46
>1pxv_A Cysteine protease; hydrolase; 1.80A {Staphylococcus aureus} SCOP: d.3.1.1 PDB: 1y4h_A
Probab=97.48 E-value=0.0026 Score=52.77 Aligned_cols=131 Identities=18% Similarity=0.158 Sum_probs=88.6
Q ss_pred CCCCCccHHHHHhhhHHHHHHhhhc--------CCccccChhHhhhcCCCCCCCCCCCCCCCCCCCChHHHHHHHHHcCC
Q 017548 154 DQGACGSCWSFSATGALEGAHFLST--------GELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGG 225 (369)
Q Consensus 154 dQg~cgsCwAfa~~~~le~~~~~~~--------~~~~~lS~q~l~dc~~~~~~~~~~~~~~gC~GG~~~~a~~~~~~~~G 225 (369)
.||.-+-|-+|+.++.|.+..-... .-...+|+|+|.++ |..+...++|+... |
T Consensus 26 TQg~~~WCa~Y~~aAilN~~~nt~~~nA~~iMr~~yPN~s~~~l~~t-----------------~~~~~q~Iky~~s~-G 87 (183)
T 1pxv_A 26 QQFDNSWAAGFSMAALLNATKNTDTYNAHDIMRTLYPEVSEQDLPNC-----------------ATFPNQMIEYGKSQ-G 87 (183)
T ss_dssp CCCSSSCHHHHHHHHHHHHHHTCSCCCHHHHHHHHSTTSCTTTGGGC-----------------CBCHHHHHHHHHHT-T
T ss_pred ccCcCchHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCChhHHhhc-----------------CCCHHHHHHHHHHc-C
Confidence 5999999999999998886542211 11256788877664 44688889998755 4
Q ss_pred cCCCCCcccCCCCCCCccCCCCCceEEeeeeEecCchHHHHHHHHHhcCCeEEEEEcccccccCCCeeecCCCCCcCCeE
Q 017548 226 VEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHG 305 (369)
Q Consensus 226 i~~e~~yPy~~~~~~~c~~~~~~~~~~i~~~~~~~~~~~~ik~~l~~~gPV~v~~~~~~f~~y~~Gi~~~~~~~~~~~Ha 305 (369)
... .+..-..+.+++++.+-++-|+.+..... +. .......+||
T Consensus 88 ~~~--------------------------~~~nr~ls~neV~~~i~~Nk~I~v~~~~v---------~e-~~~~~~~gHA 131 (183)
T 1pxv_A 88 RDI--------------------------HYQEGVPSYNQVDQLTKDNVGIMILAQSV---------SQ-NPNDPHLGHA 131 (183)
T ss_dssp CCC--------------------------EEEESCCCHHHHHHHHHTTCCEEEEEECC---------CS-STTSCCCEEE
T ss_pred cCh--------------------------hHhcCCCCHHHHHHHHhcCCcEEEEcccc---------cc-CCCCccCcee
Confidence 310 11112236788999999999999876532 11 1112247899
Q ss_pred EEEEEecccCCcCCcCCCCCEEEEEcCCCCCCCCCcEEEEEeCCC
Q 017548 306 VLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRN 350 (369)
Q Consensus 306 v~iVGyg~~~~~~~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~~n 350 (369)
++||||-.- ++.++.+|=|-|-. |++-++.+.+
T Consensus 132 ~av~Gya~~-------~~~~~y~~WNPW~~-----~~~~~~a~S~ 164 (183)
T 1pxv_A 132 LAVVGNAKI-------NDQEKLIYWNPWDT-----ELSIQDADSS 164 (183)
T ss_dssp EEEEEEEEE-------TTEEEEEEECTTCS-----SCEEEETTCC
T ss_pred EEEEeeeec-------CCCeEEEEeCCccC-----CcEeecCCCC
Confidence 999999875 56789999888843 7777765533
No 47
>1cv8_A Staphopain; cysteine protease, thiol protease, papain family; HET: E64; 1.75A {Staphylococcus aureus} SCOP: d.3.1.1
Probab=97.37 E-value=0.005 Score=50.94 Aligned_cols=129 Identities=16% Similarity=0.112 Sum_probs=86.5
Q ss_pred CCCCCccHHHHHhhhHHHHHHhhh--------cCCccccChhHhhhcCCCCCCCCCCCCCCCCCCCChHHHHHHHHHcCC
Q 017548 154 DQGACGSCWSFSATGALEGAHFLS--------TGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGG 225 (369)
Q Consensus 154 dQg~cgsCwAfa~~~~le~~~~~~--------~~~~~~lS~q~l~dc~~~~~~~~~~~~~~gC~GG~~~~a~~~~~~~~G 225 (369)
.||.-+-|-+|+.+++|-+..-.. ..-...+|+++|..+. ..+...++|+...+
T Consensus 17 TQg~~pWCa~Ya~aailN~~~~~~~~~A~~imr~~yPn~S~~~l~~~~-----------------~t~~e~iky~~s~g- 78 (174)
T 1cv8_A 17 TQGNNGWCAGYTMSALLNATYNTNKYHAEAVMRFLHPNLQGQQFQFTG-----------------LTPREMIYFGQTQG- 78 (174)
T ss_dssp CCCSSSCHHHHHHHHHHHHHHTCCCCCHHHHHHHHCSSCCHHHHHHCC-----------------CCHHHHHHHHHHTT-
T ss_pred ccCCCchHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCCHHHHhhcC-----------------CCHHHHHHHHHHcC-
Confidence 599999999999999988654221 1123578999998654 34778889987763
Q ss_pred cCCCCCcccCCCCCCCccCCCCCceEEeeeeEecCchHHHHHHHHHhcCCeEEEEEcccccccCCCeeecCCCCCcCCeE
Q 017548 226 VEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHG 305 (369)
Q Consensus 226 i~~e~~yPy~~~~~~~c~~~~~~~~~~i~~~~~~~~~~~~ik~~l~~~gPV~v~~~~~~f~~y~~Gi~~~~~~~~~~~Ha 305 (369)
- .- .+..-..+.+++++++.++-|+.+..+... .. .....+||
T Consensus 79 ~-~~-------------------------~~~n~~ls~~eV~~~~~~nk~i~i~~~~ve---~~--------~~~~~gHA 121 (174)
T 1cv8_A 79 R-SP-------------------------QLLNRMTTYNEVDNLTKNNKGIAILGSRVE---SR--------NGMHAGHA 121 (174)
T ss_dssp C-CC-------------------------EEESSCCCHHHHHHHHHTTCCEEEEEEESS---CB--------TTBCCEEE
T ss_pred C-Ch-------------------------hhhcCCCCHHHHHHHHhcCCceEEEccccc---CC--------CCCCCcee
Confidence 2 10 011112356788899989899988776421 11 11347899
Q ss_pred EEEEEecccCCcCCcCCCCCEEEEEcCCCCCCCCCcEEEEEeC
Q 017548 306 VLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMG 348 (369)
Q Consensus 306 v~iVGyg~~~~~~~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~ 348 (369)
++||||-.-. +|.+|.++=|-|-. +.+-++-+
T Consensus 122 lav~Gy~~~~------ng~~~y~~WNPW~~-----~~~~~s~~ 153 (174)
T 1cv8_A 122 MAVVGNAKLN------NGQEVIIIWNPWDN-----GFMTQDAK 153 (174)
T ss_dssp EEEEEEEEET------TSCEEEEEECTTCS-----SCEEEETT
T ss_pred EEEEeeeeec------CCceEEEEeCCccC-----CcEEecCC
Confidence 9999998742 56789999998843 45554443
No 48
>1x9y_A Cysteine proteinase; half-barrel, barrel-sandwich-hybrid, hydrolase; 2.50A {Staphylococcus aureus} SCOP: d.3.1.1 d.17.1.4
Probab=97.16 E-value=0.0062 Score=55.88 Aligned_cols=132 Identities=17% Similarity=0.186 Sum_probs=86.6
Q ss_pred cCCCCCccHHHHHhhhHHHHHHhhh--------cCCccccChhHhhhcCCCCCCCCCCCCCCCCCCCChHHHHHHHHHcC
Q 017548 153 KDQGACGSCWSFSATGALEGAHFLS--------TGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAG 224 (369)
Q Consensus 153 ~dQg~cgsCwAfa~~~~le~~~~~~--------~~~~~~lS~q~l~dc~~~~~~~~~~~~~~gC~GG~~~~a~~~~~~~~ 224 (369)
..||.-+-|-+|+.+++|-+..-.. ..-...+|+++|.++ |..+...++|+...
T Consensus 201 ETQg~~pWCa~Ya~aailN~~~~t~~~nA~~iMr~~yPN~S~~~l~~t-----------------s~~~~q~Iky~qsy- 262 (367)
T 1x9y_A 201 EQQFDNSWCAGFSMAALLNATKNTDTYNAHDIMRTLYPEVSEQDLPNC-----------------ATFPNQMIEYGKSQ- 262 (367)
T ss_dssp CCCSSSSCHHHHHHHHHHHHHTTCSCCCHHHHHHHHCTTSCTTTGGGC-----------------CCCHHHHHHHHHHT-
T ss_pred eccCCCchHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCChhHHhhc-----------------CCCHHHHHHHHHHh-
Confidence 4599999999999999887653211 111246777777764 44588889998754
Q ss_pred CcCCCCCcccCCCCCCCccCCCCCceEEeeeeEecCchHHHHHHHHHhcCCeEEEEEcccccccCCCeeecCCCCCcCCe
Q 017548 225 GVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDH 304 (369)
Q Consensus 225 Gi~~e~~yPy~~~~~~~c~~~~~~~~~~i~~~~~~~~~~~~ik~~l~~~gPV~v~~~~~~f~~y~~Gi~~~~~~~~~~~H 304 (369)
|.- + .+..-..+.+++++.+-.+-|+.+...... .+ ......+|
T Consensus 263 G~~-------------------------~-~~~n~~ls~deVk~~id~Nk~I~v~~~~v~----~~------~n~~~~gH 306 (367)
T 1x9y_A 263 GRD-------------------------I-HYQEGVPSYNQVDQLTKDNVGIMILAQSVS----QN------PNDPHLGH 306 (367)
T ss_dssp TEE-------------------------E-EEEESCCCHHHHHHHHHTTCCEEEEEEETT----SC------SSSCCCSE
T ss_pred Ccc-------------------------h-hhhcCCCCHHHHHHHHhcCCcEEEEccccc----cC------CCCccCce
Confidence 431 0 122222357788899988899998776421 11 11224789
Q ss_pred EEEEEEecccCCcCCcCCCCCEEEEEcCCCCCCCCCcEEEEEeCCC
Q 017548 305 GVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRN 350 (369)
Q Consensus 305 av~iVGyg~~~~~~~~~~~~~ywivkNSWG~~WG~~Gy~~i~~~~n 350 (369)
||+||||-.. ++.+|.++-|-|-. +++-++...+
T Consensus 307 AlavvGyA~~-------~~~~~y~~WNPW~~-----~~~~~sa~S~ 340 (367)
T 1x9y_A 307 ALAVVGNAKI-------NDQEKLIYWNPWDT-----ELSIQDADSS 340 (367)
T ss_dssp EEEEEEEEEE-------TTEEEEEEECTTCS-----SCEEEETTCC
T ss_pred eEEEEecccc-------CCCcEEEEecCccC-----CceeecCCCC
Confidence 9999999654 46789999888843 3666665433
No 49
>4d8b_A Streptopain; papain fold, cysteine protease, secreted, hydrolase; 1.06A {Streptococcus pyogenes} PDB: 4d8e_A* 4d8i_A* 2uzj_A* 2jtc_A
Probab=83.43 E-value=1.3 Score=39.48 Aligned_cols=54 Identities=24% Similarity=0.597 Sum_probs=39.4
Q ss_pred HHHHHHHHHhcCCeEEEEEcccccccCCCeeecCCCCCcCCeEEEEEEecccCCcCCcCCCCCEEEEEcCCCCCCC--CC
Q 017548 263 EDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWG--EN 340 (369)
Q Consensus 263 ~~~ik~~l~~~gPV~v~~~~~~f~~y~~Gi~~~~~~~~~~~Hav~iVGyg~~~~~~~~~~~~~ywivkNSWG~~WG--~~ 340 (369)
.+.|+++|.+..||.+.-.. ..++||.+|=||..+ +|+-|- || || .+
T Consensus 171 ~~~I~~eL~~grPV~~~G~~-----------------~~gGHAwViDGY~~~----------~~~H~N--wG--WgG~~n 219 (261)
T 4d8b_A 171 EAQIDKELSQNQPVYYQGVG-----------------KVGGHAFVIDGADGR----------NFYHVN--WG--WGGVSD 219 (261)
T ss_dssp HHHHHHHHHTTCCEEEEEEE-----------------TTEEEEEEEEEEESS----------SCEEEE--CS--STTTTC
T ss_pred HHHHHHHHHcCCCEEEEeec-----------------CCCceEEEEcccccC----------CEEEEE--cC--CCCCCC
Confidence 46789999999999875431 136899999999753 465554 65 55 48
Q ss_pred cEEEEEe
Q 017548 341 GYYKICM 347 (369)
Q Consensus 341 Gy~~i~~ 347 (369)
|||.+.-
T Consensus 220 GYy~l~~ 226 (261)
T 4d8b_A 220 GFFRLDA 226 (261)
T ss_dssp EEECTTC
T ss_pred ceeeccc
Confidence 9999864
No 50
>3erv_A Putative C39-like peptidase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.10A {Bacillus anthracis}
Probab=83.20 E-value=2.8 Score=36.79 Aligned_cols=49 Identities=20% Similarity=0.419 Sum_probs=32.0
Q ss_pred hHHHHHHHHHhcCCeEEEEEccc-------cccc--CCCeeecCCCCCcCCeEEEEEEeccc
Q 017548 262 DEDQMAANLVKHGPLAVGINAVW-------MQTY--IGGVSCPYICGKYLDHGVLIVGYGSS 314 (369)
Q Consensus 262 ~~~~ik~~l~~~gPV~v~~~~~~-------f~~y--~~Gi~~~~~~~~~~~Hav~iVGyg~~ 314 (369)
+.++|++.|.++.||.|..+... |+.+ .+|-... ...+|+|+|+||+..
T Consensus 131 sl~~L~~~I~~G~PVIv~~t~~~~p~~~~~~~~W~~~~G~~~~----~~~~H~VVl~GYd~~ 188 (236)
T 3erv_A 131 SIEELYKSVKAGQPVVIITNATFAPLDEDEFTTWETNNGDVSI----TYNEHCVVLIGYDQE 188 (236)
T ss_dssp CHHHHHHHHHTTCCEEEEEETTSSCCCGGGCEEEEETTEEEEE----CTTEEEEEEEEECSS
T ss_pred CHHHHHHHHHCCCeEEEEEeCCcccccccccceeecCCCceee----ccCCeEEEEEEEeCC
Confidence 68999999998889999876421 1111 1222110 125799999999854
No 51
>1dki_A Pyrogenic exotoxin B zymogen; cysteine protease, papain-like; 1.60A {Streptococcus pyogenes} SCOP: d.3.1.1 PDB: 1pvj_A*
Probab=67.30 E-value=13 Score=34.74 Aligned_cols=54 Identities=24% Similarity=0.597 Sum_probs=38.5
Q ss_pred HHHHHHHHHhcCCeEEEEEcccccccCCCeeecCCCCCcCCeEEEEEEecccCCcCCcCCCCCEEEEEcCCCCCCC--CC
Q 017548 263 EDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWG--EN 340 (369)
Q Consensus 263 ~~~ik~~l~~~gPV~v~~~~~~f~~y~~Gi~~~~~~~~~~~Hav~iVGyg~~~~~~~~~~~~~ywivkNSWG~~WG--~~ 340 (369)
.+.|+++|.++.||.+.-.. ..++||.+|=||..+ +||-|= || || .+
T Consensus 289 ~~~i~~eL~~~rPV~~~G~~-----------------~~gGHAfV~DGy~~~----------~~~H~N--wG--WgG~~n 337 (371)
T 1dki_A 289 EAQIDKELSQNQPVYYQGVG-----------------KVGGHAFVIDGADGR----------NFYHVN--WG--WGGVSD 337 (371)
T ss_dssp HHHHHHHHHTTCCEEEEEEE-----------------TTEEEEEEEEEECSS----------SEEEEE--CS--STTTTC
T ss_pred HHHHHHHHHcCCCEEEEeec-----------------CCCceEEEECcccCC----------CeEEEE--eC--cCCCCC
Confidence 46788999999999753321 016899999999753 476665 55 54 48
Q ss_pred cEEEEEe
Q 017548 341 GYYKICM 347 (369)
Q Consensus 341 Gy~~i~~ 347 (369)
|||.+.-
T Consensus 338 Gyy~l~~ 344 (371)
T 1dki_A 338 GFFRLDA 344 (371)
T ss_dssp EEEESCC
T ss_pred cceeccC
Confidence 9999863
No 52
>3bb7_A Interpain A; cysteine protease, zymogen activation, bacterial odontopatho hydrolase; 1.50A {Prevotella intermedia} PDB: 3bba_A
Probab=66.00 E-value=13 Score=34.04 Aligned_cols=60 Identities=28% Similarity=0.464 Sum_probs=38.6
Q ss_pred HHHHHHHHhcCCeEEEEEcccccccCCCeeecCCCCCcCCeEEEEEEecccCCcCCcCCCCCEEEEEcCCCCCCCCCcEE
Q 017548 264 DQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYY 343 (369)
Q Consensus 264 ~~ik~~l~~~gPV~v~~~~~~f~~y~~Gi~~~~~~~~~~~Hav~iVGyg~~~~~~~~~~~~~ywivkNSWG~~WG~~Gy~ 343 (369)
+.|+++|.++.||.+.-..... . ...++||.+|=||..+ +||-|==.||-. .+|||
T Consensus 239 ~~i~~eL~~~rPV~~~G~~~~~------~------~~~~GHafV~DGY~~~----------~~~H~NwGWgG~--~nGyy 294 (321)
T 3bb7_A 239 DIVFSELTKGHPLIYGGVSPGS------M------GQDAGHAFVIDGYNKA----------GLVSVNWGWNGD--VDGYY 294 (321)
T ss_dssp HHHHHHHHTTCCEEEEEC-------------------CCCEEEEEEEECTT----------SCEEEECSSTTT--TCEEE
T ss_pred HHHHHHHHhCCCEEEEEecCCC------C------CCCCceEEEEccccCC----------CeEEEecCCCCC--CCceE
Confidence 5789999999998764322111 1 1247899999999753 477665444411 38999
Q ss_pred EEEe
Q 017548 344 KICM 347 (369)
Q Consensus 344 ~i~~ 347 (369)
.+.-
T Consensus 295 ~l~~ 298 (321)
T 3bb7_A 295 KIDL 298 (321)
T ss_dssp CCTT
T ss_pred eccC
Confidence 9863
No 53
>2r9f_A Calpain-1 catalytic subunit; protease, peptidase, inhibitor, alpha-ketoamide, hydrolase, thiol protease; HET: K2Z; 1.60A {Rattus norvegicus} SCOP: d.3.1.3 PDB: 1tlo_A* 2g8e_A* 1tl9_A* 2nqg_A* 2nqi_A* 2r9c_A* 2g8j_A* 1kxr_A 2ary_A 1zcm_A* 1mdw_A
Probab=37.30 E-value=65 Score=29.50 Aligned_cols=68 Identities=16% Similarity=0.277 Sum_probs=0.0
Q ss_pred HHHHHHHHhcCCeEEEEEccc----ccccCCCeeecCCCCCcCCeEEEEEEecc----cCCcCCcCCCCCEEEEEcCCC-
Q 017548 264 DQMAANLVKHGPLAVGINAVW----MQTYIGGVSCPYICGKYLDHGVLIVGYGS----SGFAPIRFKEKPYWIIKNSWG- 334 (369)
Q Consensus 264 ~~ik~~l~~~gPV~v~~~~~~----f~~y~~Gi~~~~~~~~~~~Hav~iVGyg~----~~~~~~~~~~~~ywivkNSWG- 334 (369)
+.|++++.++.+++.++.... -..-..|+. .+||-.|++... . .+...-.+||-||
T Consensus 211 ~~l~~~~~~g~l~~~s~~~t~~~~~~~~~~~GLv--------~~HaYsVl~v~~v~~~~-------~~~~Lv~LrNPWg~ 275 (339)
T 2r9f_A 211 QIILKALERGSLLGCSINISDIRDLEAITFKNLV--------RGHAYSVTDAKQVTYQG-------QRVNLIRMRNPWGE 275 (339)
T ss_dssp HHHHHHHHHTCEEEEECCCSSSSTTCSBCTTSCB--------TTCCEEEEEEEEEEETT-------EEEEEEEEECTTSC
T ss_pred HHHHHHHHCCCeEEEEecCCCccchhhhhccCCc--------CCceEEEeEEEEEecCC-------CceEEEEEeCCCCC
Q ss_pred CCCC-------------------------CCcEEEEE
Q 017548 335 ENWG-------------------------ENGYYKIC 346 (369)
Q Consensus 335 ~~WG-------------------------~~Gy~~i~ 346 (369)
..|- ++|-|||+
T Consensus 276 ~eW~G~wsd~s~~W~~~~~~~~~~l~~~~~dG~FWMs 312 (339)
T 2r9f_A 276 VEWKGPWSDNSYEWNKVDPYEREQLRVKMEDGEFWMS 312 (339)
T ss_dssp CCCCSTTSTTCGGGGGSCHHHHHHHCCCCCSSEEEEE
T ss_pred ccccCCCCcCCccccccCHHHHHHhCCCCCCCEEEEE
No 54
>2nqa_A Calpain 8; calpain, calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC; HET: AR7; 2.20A {Homo sapiens}
Probab=34.83 E-value=68 Score=29.19 Aligned_cols=68 Identities=16% Similarity=0.310 Sum_probs=0.0
Q ss_pred HHHHHHHHhcCCeEEEEEccc----ccccCCCeeecCCCCCcCCeEEEEEEecccCCcCCcCC----CCCEEEEEcCCC-
Q 017548 264 DQMAANLVKHGPLAVGINAVW----MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFK----EKPYWIIKNSWG- 334 (369)
Q Consensus 264 ~~ik~~l~~~gPV~v~~~~~~----f~~y~~Gi~~~~~~~~~~~Hav~iVGyg~~~~~~~~~~----~~~ywivkNSWG- 334 (369)
+.|++++..+.+|+.++.... -..-..|+. .+||-.|++.... + +...-.+||-||
T Consensus 206 ~~l~~~~~~g~l~~~~~~~~~~~~~~~~~~~GLv--------~~HaYsVl~v~~v-------~~~~~~~~lv~lrNPWg~ 270 (326)
T 2nqa_A 206 QIIRKALCAGSLLGCSIDVYSAAEAEAITSQKLV--------KSHAYSVTGVEEV-------NFQGHPEKLIRLRNPWGE 270 (326)
T ss_dssp HHHHHHHHTTCEEEEECCCSSGGGTTCBCTTSCB--------SSCCEEEEEEEEE-------EETTEEEEEEEEECTTCC
T ss_pred HHHHHHHhCCCceEEeecCCCcccchhhhccCCc--------cCceEEEEEEEEE-------ecCCCceEEEEecCCCcC
Q ss_pred CCCC-------------------------CCcEEEEE
Q 017548 335 ENWG-------------------------ENGYYKIC 346 (369)
Q Consensus 335 ~~WG-------------------------~~Gy~~i~ 346 (369)
..|- ++|-|||+
T Consensus 271 ~eW~G~wsd~s~~W~~~~~~~~~~l~~~~~dG~FWMs 307 (326)
T 2nqa_A 271 VEWSGAWSDDAPEWNHIDPRRKEELDKKVEDGEFWMS 307 (326)
T ss_dssp -CCCSTTSTTCGGGGGSCHHHHHHHCCCCCSSEEEEE
T ss_pred ccccCCCCCCCccccccCHHHHHHhCCCCCCCEEEEE
No 55
>1jb0_F Photosystem 1 reaction centre subunit III; membrane protein, multiprotein-pigment complex, photosynthes; HET: CL1 PQN BCR LHG LMG; 2.50A {Synechococcus elongatus} SCOP: f.23.16.1 PDB: 3pcq_F*
Probab=33.05 E-value=27 Score=28.31 Aligned_cols=26 Identities=19% Similarity=0.188 Sum_probs=13.2
Q ss_pred HHHHHHHHhCCccCCHHHHHHHHHHH
Q 017548 52 HFSLFKSKFSKTYATQEEHDYRFRVF 77 (369)
Q Consensus 52 ~f~~f~~~~~k~Y~~~~e~~~R~~iF 77 (369)
.|++=.++.-|+-.+.+....||..|
T Consensus 36 aF~kr~k~~~~~~~s~~~~k~RFe~Y 61 (164)
T 1jb0_F 36 AFQKRAAAAVNTTADPASGQKRFERY 61 (164)
T ss_dssp HHHHHHHTCCCCSSSTTHHHHHHHHH
T ss_pred HHHHHHHhhccCCCChHHHHHHHHHH
Confidence 46655554444444555555555433
No 56
>1ziv_A Calpain 9; cysteine protease, papain, calcium-dependent, thiol protease, structural genomics consortium, SGC, hydrolase; 2.31A {Homo sapiens} SCOP: d.3.1.3 PDB: 2p0r_A*
Probab=28.10 E-value=1.1e+02 Score=27.88 Aligned_cols=69 Identities=19% Similarity=0.356 Sum_probs=0.0
Q ss_pred HHHHHHHHhcCCeEEEEEccc----ccccCCCeeecCCCCCcCCeEEEEEEeccc---CCcCCcCCCCCEEEEEcCCCC-
Q 017548 264 DQMAANLVKHGPLAVGINAVW----MQTYIGGVSCPYICGKYLDHGVLIVGYGSS---GFAPIRFKEKPYWIIKNSWGE- 335 (369)
Q Consensus 264 ~~ik~~l~~~gPV~v~~~~~~----f~~y~~Gi~~~~~~~~~~~Hav~iVGyg~~---~~~~~~~~~~~ywivkNSWG~- 335 (369)
+.|++++..+.+++.++.... -..-..|+. .+||-.|++.-.. . .+...-.+||-||.
T Consensus 210 ~~l~~~~~~g~l~~~~~~~t~~~~~e~~~~~GLv--------~~HaYsVl~v~~v~~~~------~~~~Lv~LrNPWg~~ 275 (339)
T 1ziv_A 210 EILEKALKRGSLLGCFIDTRSAAESEARTPFGLI--------KGHAYSVTGIDQVSFRG------QRIELIRIRNPWGQV 275 (339)
T ss_dssp HHHHHHHHHTCEEEEECCCSSGGGTTCBCTTSCB--------TTCCEEEEEEEEEEETT------EEEEEEEEECCSSCC
T ss_pred HHHHHHHhCCCeEEEEeccCCccchhhhhccCcc--------cCeeEEEeEEEEEecCC------CceEEEEecCCCCCC
Q ss_pred ----CCC----------------------CCcEEEEE
Q 017548 336 ----NWG----------------------ENGYYKIC 346 (369)
Q Consensus 336 ----~WG----------------------~~Gy~~i~ 346 (369)
.|. ++|-|||+
T Consensus 276 eW~G~wsd~s~~W~~~~~~~~~~l~~~~~~dG~FWMs 312 (339)
T 1ziv_A 276 EWNGSWSDSSPEWRSVGPAEQKRLCHTALDDGEFWMA 312 (339)
T ss_dssp CCCSTTSTTCHHHHHSCHHHHHHTTCCCCSSSEEEEE
T ss_pred ccCCCCCcCChhccccCHHHHHHhhCCCCCCCEEEEE
No 57
>3bx4_B Aggretin beta chain; toxin; 1.70A {Agkistrodon rhodostoma} PDB: 2vrp_B
Probab=26.65 E-value=14 Score=28.89 Aligned_cols=19 Identities=37% Similarity=0.453 Sum_probs=0.0
Q ss_pred ChhhHHHHHHHHHHHHHhh
Q 017548 1 MERLILSSLLLLLLSSVLA 19 (369)
Q Consensus 1 m~~~~~~~~~~~~~~~~~~ 19 (369)
|.|.|+++++||+++++++
T Consensus 1 M~~~~~~~~~ll~~~~~~~ 19 (146)
T 3bx4_B 1 MGRFIFVSFGLLVVFLSLS 19 (146)
T ss_dssp -------------------
T ss_pred CceeHHHHHHHHHHHHhcc
Confidence 8887776554444443333
No 58
>1co7_I BPTI, bovine pancreatic trypsin inhibitor; complex (serine protease/inhibitor), hydrolase/hydrolase inhibitor complex; 1.90A {Bos taurus} SCOP: g.8.1.1
Probab=25.04 E-value=15 Score=27.26 Aligned_cols=16 Identities=56% Similarity=0.746 Sum_probs=0.0
Q ss_pred ChhhHHHHHHHHHHHH
Q 017548 1 MERLILSSLLLLLLSS 16 (369)
Q Consensus 1 m~~~~~~~~~~~~~~~ 16 (369)
|.|+.+..++||+|.+
T Consensus 2 m~~~~ls~~lllll~~ 17 (99)
T 1co7_I 2 MSRLCLSVALLVLLGT 17 (99)
T ss_dssp ----------------
T ss_pred cchHHHHHHHHHHHHH
Confidence 7776554444433333
No 59
>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L
Probab=21.92 E-value=1.4e+02 Score=30.37 Aligned_cols=68 Identities=19% Similarity=0.330 Sum_probs=0.0
Q ss_pred HHHHHHHHhcCCeEEEEEccc----ccccCCCeeecCCCCCcCCeEEEEEEecc----cCCcCCcCCCCCEEEEEcCCCC
Q 017548 264 DQMAANLVKHGPLAVGINAVW----MQTYIGGVSCPYICGKYLDHGVLIVGYGS----SGFAPIRFKEKPYWIIKNSWGE 335 (369)
Q Consensus 264 ~~ik~~l~~~gPV~v~~~~~~----f~~y~~Gi~~~~~~~~~~~Hav~iVGyg~----~~~~~~~~~~~~ywivkNSWG~ 335 (369)
+.|++++..+.+++.++.... -..-..|+. .+||-.|++... . .+...-.+||-||.
T Consensus 226 ~~l~~~~~~g~l~~~~~~~~~~~~~~~~~~~GL~--------~~HaYsvl~~~~v~~~~-------~~~~lv~lrNPWg~ 290 (714)
T 3bow_A 226 KIIQKALEKGSLLGCSIDITSAADSEAVTYQKLV--------KGHAYSVTGAEEVESSG-------SLQKLIRIRNPWGQ 290 (714)
T ss_dssp HHHHHHHHTTCEEEEECCSTTSCTTCCBCTTSCB--------TTSCEEEEEEEEEEETT-------EEEEEEEEECTTSC
T ss_pred HHHHHHHhCCCeEEEEcccCCcccccchhcCCCc--------CCceEEEeeeEEeecCC-------CceEEEEEECCCCC
Q ss_pred -CCC-------------------------CCcEEEEE
Q 017548 336 -NWG-------------------------ENGYYKIC 346 (369)
Q Consensus 336 -~WG-------------------------~~Gy~~i~ 346 (369)
.|- ++|-|||+
T Consensus 291 ~ew~G~wsd~s~~W~~~~~~~~~~l~~~~~dg~FWm~ 327 (714)
T 3bow_A 291 VEWTGKWNDNCPSWNTVDPEVRANLTERQEDGEFWMS 327 (714)
T ss_dssp CCCCSTTSTTCGGGGGSCHHHHHHHCCCCCSSEEEEE
T ss_pred cccCCCCCCCCccccccCHHHHHHhCCCCCCCeEEEE
No 60
>1th5_A NIFU1; iron-sulfur cluster binding, structural genomics, program for RICE genome research, unknown function; NMR {Oryza sativa} SCOP: d.52.8.1
Probab=21.11 E-value=33 Score=24.00 Aligned_cols=26 Identities=12% Similarity=-0.001 Sum_probs=18.7
Q ss_pred CCcccCCCCCccHHHHHhhhHHHHHHhh
Q 017548 149 VTGVKDQGACGSCWSFSATGALEGAHFL 176 (369)
Q Consensus 149 v~pV~dQg~cgsCwAfa~~~~le~~~~~ 176 (369)
+--|+-||.|++| ...-..+|..+..
T Consensus 37 ~V~v~l~GaC~gc--~Tlk~gIe~~L~~ 62 (74)
T 1th5_A 37 IVKVRLTGPAAVV--RTVRIAVSKKLRE 62 (74)
T ss_dssp EEEECCCSSSSSS--SSHHHHHHHHHHH
T ss_pred EEEEEEecCCcch--HHHHHHHHHHHHH
Confidence 4578999999999 2333578877654
Done!