Query 017551
Match_columns 369
No_of_seqs 190 out of 1469
Neff 7.1
Searched_HMMs 46136
Date Fri Mar 29 09:35:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017551.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017551hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1494 NAD-dependent malate d 100.0 3.1E-75 6.7E-80 537.1 28.5 318 16-344 24-342 (345)
2 TIGR01772 MDH_euk_gproteo mala 100.0 2.2E-68 4.7E-73 515.8 31.6 310 22-342 1-311 (312)
3 cd01337 MDH_glyoxysomal_mitoch 100.0 9.5E-68 2.1E-72 510.6 31.5 299 21-320 1-300 (310)
4 COG0039 Mdh Malate/lactate deh 100.0 4.2E-66 9.2E-71 494.7 30.4 290 21-324 1-305 (313)
5 PLN00106 malate dehydrogenase 100.0 3.2E-64 6.9E-69 488.6 35.3 314 10-323 8-321 (323)
6 cd05290 LDH_3 A subgroup of L- 100.0 5.3E-63 1.2E-67 478.0 30.5 284 22-321 1-304 (307)
7 PTZ00325 malate dehydrogenase; 100.0 3.9E-62 8.4E-67 473.6 33.5 313 18-343 6-319 (321)
8 cd05293 LDH_1 A subgroup of L- 100.0 3.4E-62 7.4E-67 473.6 30.8 290 20-324 3-311 (312)
9 PRK05086 malate dehydrogenase; 100.0 6.6E-62 1.4E-66 472.0 32.8 309 21-342 1-311 (312)
10 TIGR01759 MalateDH-SF1 malate 100.0 6.7E-62 1.5E-66 472.9 30.2 293 18-323 1-320 (323)
11 KOG1495 Lactate dehydrogenase 100.0 1.6E-61 3.6E-66 444.2 27.5 286 17-319 17-323 (332)
12 PLN02602 lactate dehydrogenase 100.0 5.2E-61 1.1E-65 470.7 31.6 290 21-325 38-347 (350)
13 PRK00066 ldh L-lactate dehydro 100.0 3.4E-60 7.4E-65 460.6 32.5 292 17-324 3-311 (315)
14 TIGR01771 L-LDH-NAD L-lactate 100.0 7.5E-61 1.6E-65 461.9 26.5 279 25-319 1-297 (299)
15 PRK05442 malate dehydrogenase; 100.0 1.2E-59 2.7E-64 457.6 29.6 294 18-324 2-320 (326)
16 cd00704 MDH Malate dehydrogena 100.0 5.2E-59 1.1E-63 453.1 28.7 289 21-322 1-318 (323)
17 PTZ00117 malate dehydrogenase; 100.0 2.4E-58 5.3E-63 448.6 33.2 295 18-326 3-314 (319)
18 cd05291 HicDH_like L-2-hydroxy 100.0 1.4E-58 2.9E-63 448.3 30.2 287 21-323 1-304 (306)
19 cd00300 LDH_like L-lactate deh 100.0 1.6E-58 3.5E-63 446.4 29.7 285 23-322 1-298 (300)
20 PLN00112 malate dehydrogenase 100.0 2.3E-58 5.1E-63 461.3 30.3 288 17-317 97-411 (444)
21 PTZ00082 L-lactate dehydrogena 100.0 1.5E-57 3.2E-62 443.0 33.3 290 19-322 5-316 (321)
22 cd01338 MDH_choloroplast_like 100.0 6E-58 1.3E-62 445.5 29.9 292 19-323 1-317 (322)
23 TIGR01757 Malate-DH_plant mala 100.0 8.5E-58 1.9E-62 451.2 30.8 290 17-319 41-357 (387)
24 TIGR01763 MalateDH_bact malate 100.0 1.3E-57 2.8E-62 440.8 30.7 287 21-323 2-302 (305)
25 cd05292 LDH_2 A subgroup of L- 100.0 1.1E-56 2.4E-61 435.1 31.3 287 21-323 1-305 (308)
26 TIGR01758 MDH_euk_cyt malate d 100.0 6.3E-56 1.4E-60 431.7 30.3 292 22-323 1-319 (324)
27 cd01336 MDH_cytoplasmic_cytoso 100.0 2E-55 4.3E-60 428.7 29.1 292 19-323 1-321 (325)
28 cd01339 LDH-like_MDH L-lactate 100.0 1.6E-54 3.5E-59 418.6 30.5 285 23-321 1-297 (300)
29 PRK06223 malate dehydrogenase; 100.0 4.8E-54 1E-58 416.3 32.1 291 20-324 2-304 (307)
30 cd05294 LDH-like_MDH_nadp A la 100.0 3.2E-54 7E-59 417.9 30.8 290 21-324 1-307 (309)
31 PLN00135 malate dehydrogenase 100.0 2.4E-53 5.3E-58 410.1 27.6 261 48-320 15-298 (309)
32 cd05295 MDH_like Malate dehydr 100.0 1.4E-53 3E-58 426.8 26.4 285 17-317 120-441 (452)
33 TIGR01756 LDH_protist lactate 100.0 7.5E-52 1.6E-56 400.6 27.0 266 48-325 17-307 (313)
34 cd00650 LDH_MDH_like NAD-depen 100.0 9.8E-51 2.1E-55 385.3 28.8 251 23-320 1-259 (263)
35 KOG1496 Malate dehydrogenase [ 100.0 2.2E-44 4.8E-49 326.3 20.8 292 18-317 2-317 (332)
36 cd05197 GH4_glycoside_hydrolas 100.0 5.6E-32 1.2E-36 272.0 25.5 274 21-317 1-382 (425)
37 PF00056 Ldh_1_N: lactate/mala 100.0 5.6E-33 1.2E-37 240.1 13.0 139 21-164 1-141 (141)
38 cd05296 GH4_P_beta_glucosidase 100.0 2.5E-31 5.3E-36 267.0 26.6 279 21-316 1-370 (419)
39 PRK15076 alpha-galactosidase; 100.0 1.8E-31 3.8E-36 269.2 24.0 278 21-317 2-376 (431)
40 PF02866 Ldh_1_C: lactate/mala 100.0 4.6E-32 9.9E-37 242.3 13.0 153 166-324 1-168 (174)
41 cd05298 GH4_GlvA_pagL_like Gly 100.0 2.2E-29 4.7E-34 253.8 27.1 281 21-317 1-385 (437)
42 COG1486 CelF Alpha-galactosida 100.0 1.6E-28 3.5E-33 243.3 22.5 284 19-317 2-388 (442)
43 cd05297 GH4_alpha_glucosidase_ 100.0 1.8E-27 4E-32 240.0 26.0 281 21-317 1-379 (423)
44 PF02056 Glyco_hydro_4: Family 99.9 7.6E-22 1.7E-26 176.6 14.0 152 22-183 1-183 (183)
45 COG1004 Ugd Predicted UDP-gluc 98.9 7.7E-08 1.7E-12 94.9 17.1 115 21-147 1-131 (414)
46 PF02737 3HCDH_N: 3-hydroxyacy 98.8 9.8E-09 2.1E-13 92.3 8.6 117 22-167 1-137 (180)
47 COG1250 FadB 3-hydroxyacyl-CoA 98.8 1.4E-08 3.1E-13 98.1 9.3 121 20-166 3-140 (307)
48 PRK07066 3-hydroxybutyryl-CoA 98.7 6.3E-08 1.4E-12 94.7 10.8 120 21-166 8-141 (321)
49 PRK07819 3-hydroxybutyryl-CoA 98.7 1.4E-07 2.9E-12 91.0 11.9 122 21-169 6-146 (286)
50 PF03721 UDPG_MGDP_dh_N: UDP-g 98.7 6.8E-08 1.5E-12 87.3 7.7 133 21-167 1-149 (185)
51 PRK08293 3-hydroxybutyryl-CoA 98.6 6.4E-07 1.4E-11 86.2 12.0 120 21-166 4-142 (287)
52 PRK11730 fadB multifunctional 98.6 3.3E-07 7.2E-12 98.7 11.0 118 21-166 314-450 (715)
53 TIGR02437 FadB fatty oxidation 98.5 3.7E-07 8E-12 98.3 11.0 119 20-166 313-450 (714)
54 TIGR02441 fa_ox_alpha_mit fatt 98.5 2.6E-07 5.6E-12 99.8 9.5 119 21-166 336-472 (737)
55 TIGR02440 FadJ fatty oxidation 98.5 5.7E-07 1.2E-11 96.7 11.4 120 20-166 304-442 (699)
56 PRK11154 fadJ multifunctional 98.5 6.9E-07 1.5E-11 96.2 11.7 119 20-166 309-447 (708)
57 TIGR01915 npdG NADPH-dependent 98.5 3E-06 6.5E-11 78.4 13.8 128 21-170 1-145 (219)
58 KOG2304 3-hydroxyacyl-CoA dehy 98.5 1.8E-07 3.8E-12 85.7 5.3 123 18-167 9-155 (298)
59 TIGR02279 PaaC-3OHAcCoADH 3-hy 98.4 2.3E-06 4.9E-11 88.7 11.9 124 19-169 4-145 (503)
60 PF01210 NAD_Gly3P_dh_N: NAD-d 98.4 1.2E-06 2.5E-11 77.0 8.3 93 22-136 1-102 (157)
61 PRK05808 3-hydroxybutyryl-CoA 98.4 3.9E-06 8.4E-11 80.4 12.3 118 21-166 4-140 (282)
62 PRK06035 3-hydroxyacyl-CoA deh 98.3 5.2E-06 1.1E-10 80.0 12.5 119 21-167 4-144 (291)
63 PLN02353 probable UDP-glucose 98.3 7.8E-06 1.7E-10 84.0 13.5 122 20-147 1-138 (473)
64 PRK08268 3-hydroxy-acyl-CoA de 98.3 4.7E-06 1E-10 86.5 11.7 122 20-169 7-147 (507)
65 PRK09260 3-hydroxybutyryl-CoA 98.3 5E-06 1.1E-10 80.0 10.1 121 21-167 2-140 (288)
66 PRK07530 3-hydroxybutyryl-CoA 98.2 1.6E-05 3.4E-10 76.6 12.9 122 20-169 4-144 (292)
67 PLN02166 dTDP-glucose 4,6-dehy 98.2 1.6E-05 3.5E-10 81.0 13.2 113 19-137 119-233 (436)
68 PRK06130 3-hydroxybutyryl-CoA 98.2 1.8E-05 3.8E-10 76.9 12.8 121 20-166 4-137 (311)
69 PF01073 3Beta_HSD: 3-beta hyd 98.2 1.4E-05 3E-10 76.8 11.1 108 24-131 1-110 (280)
70 COG0240 GpsA Glycerol-3-phosph 98.1 4.9E-05 1.1E-09 74.0 13.8 119 20-165 1-131 (329)
71 PLN02545 3-hydroxybutyryl-CoA 98.1 2.2E-05 4.9E-10 75.7 11.4 122 21-170 5-145 (295)
72 PRK07531 bifunctional 3-hydrox 98.1 2.6E-05 5.5E-10 80.9 12.4 104 20-144 4-121 (495)
73 PRK06129 3-hydroxyacyl-CoA deh 98.1 3E-05 6.6E-10 75.3 11.6 122 21-168 3-142 (308)
74 PF02719 Polysacc_synt_2: Poly 98.0 1.9E-05 4.1E-10 76.0 9.0 121 23-144 1-139 (293)
75 PLN02427 UDP-apiose/xylose syn 98.0 4.8E-05 1E-09 75.8 12.2 114 19-138 13-136 (386)
76 PLN02650 dihydroflavonol-4-red 98.0 0.00014 3E-09 71.5 14.4 118 18-137 3-127 (351)
77 PLN02206 UDP-glucuronate decar 98.0 6.6E-05 1.4E-09 76.7 12.4 113 19-137 118-232 (442)
78 PLN00198 anthocyanidin reducta 98.0 0.00015 3.2E-09 70.9 14.3 116 20-137 9-130 (338)
79 TIGR03026 NDP-sugDHase nucleot 98.0 0.00011 2.3E-09 74.4 13.7 119 21-153 1-137 (411)
80 PLN02662 cinnamyl-alcohol dehy 98.0 0.00014 3.1E-09 70.0 14.0 115 20-137 4-126 (322)
81 COG1086 Predicted nucleoside-d 97.9 0.00014 3.1E-09 75.0 13.1 126 18-144 248-387 (588)
82 PRK15181 Vi polysaccharide bio 97.9 0.00015 3.3E-09 71.3 13.0 116 19-137 14-140 (348)
83 PRK15057 UDP-glucose 6-dehydro 97.9 0.00014 3.1E-09 73.0 12.5 113 21-147 1-128 (388)
84 TIGR03589 PseB UDP-N-acetylglu 97.8 0.00017 3.7E-09 70.4 11.7 113 20-137 4-124 (324)
85 COG2085 Predicted dinucleotide 97.8 0.0002 4.3E-09 65.6 11.1 96 20-140 1-96 (211)
86 PRK12439 NAD(P)H-dependent gly 97.8 0.00037 8E-09 68.8 13.0 119 17-162 4-135 (341)
87 KOG1502 Flavonol reductase/cin 97.8 0.00019 4.2E-09 69.9 10.6 117 19-140 5-130 (327)
88 PRK08125 bifunctional UDP-gluc 97.8 0.00029 6.3E-09 75.5 13.0 113 17-138 312-432 (660)
89 PLN02989 cinnamyl-alcohol dehy 97.8 0.00076 1.6E-08 65.3 14.9 117 19-137 4-128 (325)
90 PF03807 F420_oxidored: NADP o 97.8 8.6E-05 1.9E-09 59.1 6.7 94 22-139 1-96 (96)
91 PRK11908 NAD-dependent epimera 97.7 0.00025 5.5E-09 69.5 11.1 109 21-138 2-118 (347)
92 PRK06522 2-dehydropantoate 2-r 97.7 0.00055 1.2E-08 65.7 13.3 120 21-169 1-126 (304)
93 CHL00194 ycf39 Ycf39; Provisio 97.7 0.00014 3.1E-09 70.6 9.2 108 21-137 1-109 (317)
94 PLN02214 cinnamoyl-CoA reducta 97.7 0.00064 1.4E-08 66.9 13.9 111 19-137 9-126 (342)
95 PTZ00345 glycerol-3-phosphate 97.7 0.00031 6.7E-09 70.0 11.6 98 20-137 11-129 (365)
96 PRK12921 2-dehydropantoate 2-r 97.7 0.00025 5.4E-09 68.3 10.4 123 21-169 1-128 (305)
97 PLN02778 3,5-epimerase/4-reduc 97.7 0.00069 1.5E-08 65.4 13.2 92 17-130 6-104 (298)
98 TIGR03466 HpnA hopanoid-associ 97.7 0.00035 7.5E-09 67.2 11.1 111 21-137 1-112 (328)
99 TIGR01181 dTDP_gluc_dehyt dTDP 97.7 0.00036 7.9E-09 66.5 11.1 113 22-137 1-124 (317)
100 TIGR02622 CDP_4_6_dhtase CDP-g 97.7 0.00062 1.3E-08 66.9 12.8 117 20-138 4-127 (349)
101 PRK14619 NAD(P)H-dependent gly 97.7 0.00035 7.5E-09 67.9 10.7 80 19-139 3-84 (308)
102 PRK00094 gpsA NAD(P)H-dependen 97.7 0.00044 9.6E-09 67.1 11.4 100 21-142 2-110 (325)
103 PRK14620 NAD(P)H-dependent gly 97.6 0.0004 8.6E-09 67.9 11.0 117 21-163 1-131 (326)
104 TIGR03376 glycerol3P_DH glycer 97.6 0.00044 9.5E-09 68.4 11.1 96 22-137 1-116 (342)
105 PRK15182 Vi polysaccharide bio 97.6 0.00082 1.8E-08 68.4 13.4 120 18-153 4-137 (425)
106 PLN02695 GDP-D-mannose-3',5'-e 97.6 0.00026 5.6E-09 70.5 9.3 114 17-137 18-136 (370)
107 PRK11064 wecC UDP-N-acetyl-D-m 97.6 0.00083 1.8E-08 68.2 12.9 112 20-147 3-130 (415)
108 PF13460 NAD_binding_10: NADH( 97.6 0.00094 2E-08 59.0 11.6 93 23-137 1-97 (183)
109 PRK08229 2-dehydropantoate 2-r 97.6 0.00084 1.8E-08 65.9 12.4 100 21-143 3-113 (341)
110 PLN02986 cinnamyl-alcohol dehy 97.6 0.0019 4.2E-08 62.4 14.6 106 20-127 5-117 (322)
111 PLN02896 cinnamyl-alcohol dehy 97.6 0.00082 1.8E-08 66.1 12.0 114 19-137 9-137 (353)
112 PLN03209 translocon at the inn 97.5 0.00082 1.8E-08 70.4 12.2 117 18-137 78-207 (576)
113 TIGR01777 yfcH conserved hypot 97.5 0.00069 1.5E-08 64.0 10.7 99 23-130 1-103 (292)
114 PRK10675 UDP-galactose-4-epime 97.5 0.00092 2E-08 65.0 11.8 113 21-137 1-123 (338)
115 PRK08269 3-hydroxybutyryl-CoA 97.5 0.00057 1.2E-08 66.8 10.0 112 32-167 1-138 (314)
116 COG0451 WcaG Nucleoside-diphos 97.5 0.00073 1.6E-08 64.5 10.4 100 21-126 1-105 (314)
117 PLN02583 cinnamoyl-CoA reducta 97.5 0.0029 6.2E-08 60.9 14.4 114 20-137 6-127 (297)
118 PRK14618 NAD(P)H-dependent gly 97.5 0.001 2.3E-08 65.1 11.5 97 20-141 4-108 (328)
119 PRK09987 dTDP-4-dehydrorhamnos 97.5 0.00037 8.1E-09 67.2 8.2 99 21-137 1-103 (299)
120 TIGR01472 gmd GDP-mannose 4,6- 97.4 0.0011 2.5E-08 64.8 11.0 106 21-128 1-120 (343)
121 PF03446 NAD_binding_2: NAD bi 97.4 0.00071 1.5E-08 59.6 8.5 91 20-137 1-94 (163)
122 PLN02572 UDP-sulfoquinovose sy 97.4 0.00045 9.8E-09 70.6 8.2 115 19-136 46-189 (442)
123 PRK06249 2-dehydropantoate 2-r 97.4 0.0013 2.8E-08 64.1 11.0 123 18-170 3-133 (313)
124 PLN02260 probable rhamnose bio 97.4 0.0031 6.8E-08 67.6 14.4 120 18-137 4-131 (668)
125 PRK10084 dTDP-glucose 4,6 dehy 97.3 0.002 4.3E-08 63.1 11.1 106 21-127 1-114 (352)
126 TIGR01214 rmlD dTDP-4-dehydror 97.3 0.0011 2.3E-08 62.9 8.9 95 22-137 1-99 (287)
127 PLN02653 GDP-mannose 4,6-dehyd 97.3 0.0017 3.7E-08 63.4 10.3 109 19-129 5-126 (340)
128 TIGR02354 thiF_fam2 thiamine b 97.3 0.0026 5.6E-08 58.2 10.8 100 20-136 21-143 (200)
129 PLN02240 UDP-glucose 4-epimera 97.3 0.0052 1.1E-07 60.0 13.5 116 19-137 4-131 (352)
130 PRK06194 hypothetical protein; 97.3 0.0079 1.7E-07 57.0 14.4 115 20-138 6-148 (287)
131 COG1748 LYS9 Saccharopine dehy 97.3 0.0032 6.9E-08 63.1 11.9 75 20-97 1-77 (389)
132 PRK14982 acyl-ACP reductase; P 97.3 0.0019 4.2E-08 63.7 10.3 97 19-143 154-252 (340)
133 PRK10217 dTDP-glucose 4,6-dehy 97.2 0.0033 7.2E-08 61.6 11.9 106 21-127 2-115 (355)
134 PRK07417 arogenate dehydrogena 97.2 0.0021 4.5E-08 61.6 10.2 64 21-96 1-65 (279)
135 COG1087 GalE UDP-glucose 4-epi 97.2 0.0041 8.9E-08 59.9 11.8 154 21-185 1-164 (329)
136 PRK12549 shikimate 5-dehydroge 97.2 0.0024 5.3E-08 61.5 10.3 76 19-99 126-205 (284)
137 PRK07201 short chain dehydroge 97.2 0.0063 1.4E-07 64.8 14.4 111 21-133 1-121 (657)
138 PRK11150 rfaD ADP-L-glycero-D- 97.2 0.0023 5E-08 61.4 10.0 108 23-137 2-115 (308)
139 KOG1429 dTDP-glucose 4-6-dehyd 97.2 0.00092 2E-08 63.7 6.6 78 17-98 24-101 (350)
140 PF01118 Semialdhyde_dh: Semia 97.2 0.0011 2.4E-08 55.4 6.4 72 22-96 1-74 (121)
141 TIGR00872 gnd_rel 6-phosphoglu 97.2 0.0023 5.1E-08 61.9 9.6 95 21-140 1-96 (298)
142 PRK07680 late competence prote 97.1 0.0025 5.5E-08 60.7 9.7 97 21-141 1-100 (273)
143 PRK05865 hypothetical protein; 97.1 0.0053 1.1E-07 67.4 12.9 104 21-140 1-105 (854)
144 PF11975 Glyco_hydro_4C: Famil 97.1 0.0018 3.9E-08 60.5 8.0 77 240-325 133-213 (232)
145 PRK08655 prephenate dehydrogen 97.1 0.004 8.6E-08 63.7 11.0 66 21-96 1-66 (437)
146 KOG1430 C-3 sterol dehydrogena 97.1 0.0046 1E-07 61.4 10.9 111 19-131 3-120 (361)
147 PF01370 Epimerase: NAD depend 97.1 0.0007 1.5E-08 61.8 4.9 109 23-137 1-115 (236)
148 PRK07502 cyclohexadienyl dehyd 97.1 0.0039 8.5E-08 60.5 10.2 67 21-96 7-74 (307)
149 COG0677 WecC UDP-N-acetyl-D-ma 97.0 0.011 2.3E-07 59.0 12.9 132 20-165 9-157 (436)
150 TIGR02197 heptose_epim ADP-L-g 97.0 0.0047 1E-07 59.1 10.4 109 23-137 1-113 (314)
151 PLN02688 pyrroline-5-carboxyla 97.0 0.0037 8.1E-08 59.1 9.4 66 21-96 1-69 (266)
152 PRK13394 3-hydroxybutyrate deh 97.0 0.0049 1.1E-07 57.3 10.1 114 20-137 7-143 (262)
153 PF01488 Shikimate_DH: Shikima 97.0 0.0032 6.9E-08 53.8 8.0 105 19-144 11-116 (135)
154 TIGR01179 galE UDP-glucose-4-e 97.0 0.0048 1E-07 59.0 10.2 110 22-137 1-120 (328)
155 PRK08267 short chain dehydroge 97.0 0.0067 1.4E-07 56.6 11.0 112 21-138 2-136 (260)
156 TIGR01505 tartro_sem_red 2-hyd 97.0 0.0029 6.2E-08 60.8 8.7 63 22-96 1-63 (291)
157 PF10727 Rossmann-like: Rossma 97.0 0.0028 6.2E-08 53.8 7.5 103 18-146 8-115 (127)
158 COG0300 DltE Short-chain dehyd 97.0 0.013 2.9E-07 55.8 12.6 118 17-137 3-142 (265)
159 PRK07231 fabG 3-ketoacyl-(acyl 97.0 0.018 3.9E-07 53.0 13.3 76 19-99 4-92 (251)
160 PRK07634 pyrroline-5-carboxyla 97.0 0.01 2.2E-07 55.3 11.8 70 19-96 3-74 (245)
161 PRK11559 garR tartronate semia 97.0 0.004 8.6E-08 59.9 9.2 64 21-96 3-66 (296)
162 PRK11199 tyrA bifunctional cho 97.0 0.0039 8.5E-08 62.4 9.4 53 20-96 98-150 (374)
163 PRK06545 prephenate dehydrogen 96.9 0.0064 1.4E-07 60.5 10.7 67 21-96 1-68 (359)
164 PRK12320 hypothetical protein; 96.9 0.0058 1.3E-07 65.7 10.9 101 21-137 1-101 (699)
165 PRK11880 pyrroline-5-carboxyla 96.9 0.0052 1.1E-07 58.2 9.5 95 20-140 2-97 (267)
166 PLN02686 cinnamoyl-CoA reducta 96.9 0.0043 9.3E-08 61.7 9.2 108 18-127 51-169 (367)
167 COG2084 MmsB 3-hydroxyisobutyr 96.9 0.0091 2E-07 57.5 10.9 65 21-96 1-65 (286)
168 PLN02657 3,8-divinyl protochlo 96.9 0.011 2.5E-07 59.3 12.2 114 18-137 58-181 (390)
169 PRK12384 sorbitol-6-phosphate 96.9 0.024 5.3E-07 52.7 13.6 117 21-139 3-142 (259)
170 PRK07102 short chain dehydroge 96.9 0.019 4.1E-07 53.0 12.8 115 21-138 2-135 (243)
171 PRK07806 short chain dehydroge 96.9 0.0065 1.4E-07 56.1 9.6 114 20-137 6-134 (248)
172 PRK12480 D-lactate dehydrogena 96.9 0.0059 1.3E-07 60.2 9.7 91 19-138 145-235 (330)
173 PRK07326 short chain dehydroge 96.9 0.014 3E-07 53.5 11.5 115 20-139 6-141 (237)
174 PF02558 ApbA: Ketopantoate re 96.8 0.0039 8.4E-08 53.6 7.2 120 23-169 1-127 (151)
175 PRK12829 short chain dehydroge 96.8 0.014 3.1E-07 54.2 11.6 36 19-56 10-45 (264)
176 PRK08507 prephenate dehydrogen 96.8 0.009 1.9E-07 57.0 10.3 66 21-96 1-66 (275)
177 TIGR03206 benzo_BadH 2-hydroxy 96.8 0.016 3.6E-07 53.3 11.8 115 20-138 3-139 (250)
178 PRK12828 short chain dehydroge 96.8 0.011 2.3E-07 53.9 10.3 116 20-138 7-141 (239)
179 PRK12429 3-hydroxybutyrate deh 96.8 0.011 2.3E-07 54.8 10.4 114 20-138 4-140 (258)
180 PLN02253 xanthoxin dehydrogena 96.8 0.013 2.8E-07 55.4 11.1 114 20-138 18-155 (280)
181 PTZ00142 6-phosphogluconate de 96.8 0.0053 1.2E-07 63.3 9.0 97 21-140 2-104 (470)
182 PRK10538 malonic semialdehyde 96.8 0.0065 1.4E-07 56.4 8.6 113 21-138 1-134 (248)
183 PRK08818 prephenate dehydrogen 96.7 0.011 2.3E-07 59.2 10.5 84 20-136 4-87 (370)
184 PRK05717 oxidoreductase; Valid 96.7 0.0055 1.2E-07 57.1 7.9 115 19-138 9-144 (255)
185 PRK08340 glucose-1-dehydrogena 96.7 0.019 4.2E-07 53.6 11.4 74 21-99 1-87 (259)
186 TIGR01832 kduD 2-deoxy-D-gluco 96.7 0.039 8.3E-07 50.9 13.3 116 19-138 4-140 (248)
187 PRK07523 gluconate 5-dehydroge 96.7 0.015 3.2E-07 54.1 10.5 116 20-139 10-147 (255)
188 PLN00141 Tic62-NAD(P)-related 96.7 0.015 3.4E-07 54.2 10.6 109 19-136 16-130 (251)
189 PRK12490 6-phosphogluconate de 96.7 0.017 3.7E-07 55.9 11.0 64 21-96 1-67 (299)
190 TIGR01746 Thioester-redct thio 96.7 0.019 4.2E-07 55.6 11.6 114 22-137 1-135 (367)
191 PRK12939 short chain dehydroge 96.6 0.042 9.2E-07 50.5 13.2 115 20-138 7-143 (250)
192 PRK08643 acetoin reductase; Va 96.6 0.035 7.6E-07 51.5 12.7 114 21-138 3-139 (256)
193 PRK08265 short chain dehydroge 96.6 0.012 2.6E-07 55.2 9.5 111 20-137 6-136 (261)
194 PRK05708 2-dehydropantoate 2-r 96.6 0.032 6.9E-07 54.2 12.7 121 20-169 2-130 (305)
195 PRK09599 6-phosphogluconate de 96.6 0.018 3.9E-07 55.7 11.0 64 21-96 1-67 (301)
196 COG1893 ApbA Ketopantoate redu 96.6 0.012 2.5E-07 57.5 9.6 122 21-170 1-128 (307)
197 PRK15461 NADH-dependent gamma- 96.6 0.01 2.2E-07 57.4 9.2 64 21-96 2-65 (296)
198 PRK12367 short chain dehydroge 96.6 0.024 5.3E-07 53.1 11.4 99 21-123 15-117 (245)
199 PRK07424 bifunctional sterol d 96.6 0.029 6.3E-07 56.8 12.7 102 19-123 177-283 (406)
200 PRK12491 pyrroline-5-carboxyla 96.6 0.011 2.4E-07 56.6 9.2 67 21-96 3-71 (272)
201 PRK07679 pyrroline-5-carboxyla 96.6 0.024 5.1E-07 54.3 11.4 69 20-96 3-73 (279)
202 PRK08251 short chain dehydroge 96.6 0.094 2E-06 48.3 15.2 102 21-124 3-123 (248)
203 PRK06180 short chain dehydroge 96.6 0.026 5.5E-07 53.4 11.6 113 20-137 4-136 (277)
204 cd01487 E1_ThiF_like E1_ThiF_l 96.6 0.025 5.3E-07 50.5 10.7 33 22-56 1-33 (174)
205 PRK06182 short chain dehydroge 96.6 0.02 4.3E-07 54.0 10.8 113 20-138 3-133 (273)
206 KOG2305 3-hydroxyacyl-CoA dehy 96.6 0.0058 1.2E-07 56.6 6.7 94 21-131 4-114 (313)
207 cd01065 NAD_bind_Shikimate_DH 96.6 0.013 2.7E-07 50.5 8.7 74 18-99 17-92 (155)
208 PRK12937 short chain dehydroge 96.6 0.022 4.9E-07 52.3 10.7 116 19-138 4-140 (245)
209 COG1088 RfbB dTDP-D-glucose 4, 96.6 0.021 4.6E-07 55.0 10.5 110 21-130 1-118 (340)
210 PRK05875 short chain dehydroge 96.6 0.039 8.6E-07 51.9 12.5 117 20-138 7-146 (276)
211 PRK07067 sorbitol dehydrogenas 96.6 0.012 2.7E-07 54.7 9.0 115 20-138 6-140 (257)
212 PRK08945 putative oxoacyl-(acy 96.5 0.046 1E-06 50.5 12.7 118 18-138 10-152 (247)
213 PRK06928 pyrroline-5-carboxyla 96.5 0.03 6.5E-07 53.6 11.7 99 21-142 2-103 (277)
214 KOG1201 Hydroxysteroid 17-beta 96.5 0.053 1.1E-06 52.3 13.1 115 17-137 35-172 (300)
215 PRK06914 short chain dehydroge 96.5 0.041 8.8E-07 51.9 12.4 114 21-137 4-139 (280)
216 PF01113 DapB_N: Dihydrodipico 96.5 0.012 2.7E-07 49.4 7.9 72 21-95 1-74 (124)
217 PRK06172 short chain dehydroge 96.5 0.027 5.9E-07 52.2 11.0 114 20-138 7-144 (253)
218 COG0287 TyrA Prephenate dehydr 96.5 0.025 5.4E-07 54.4 10.9 64 20-96 3-72 (279)
219 PRK08213 gluconate 5-dehydroge 96.5 0.052 1.1E-06 50.5 12.9 115 20-138 12-149 (259)
220 PF04321 RmlD_sub_bind: RmlD s 96.5 0.0024 5.3E-08 61.3 4.0 98 21-137 1-100 (286)
221 PRK06482 short chain dehydroge 96.5 0.024 5.2E-07 53.4 10.7 112 21-137 3-134 (276)
222 COG0569 TrkA K+ transport syst 96.5 0.011 2.5E-07 54.9 8.3 72 21-96 1-74 (225)
223 PRK07774 short chain dehydroge 96.5 0.037 8E-07 51.0 11.7 114 20-137 6-144 (250)
224 PRK07024 short chain dehydroge 96.5 0.015 3.2E-07 54.3 9.1 111 21-137 3-137 (257)
225 PRK06181 short chain dehydroge 96.5 0.033 7.2E-07 51.9 11.4 115 21-139 2-138 (263)
226 PRK05866 short chain dehydroge 96.5 0.043 9.4E-07 52.7 12.5 76 20-99 40-128 (293)
227 PLN02256 arogenate dehydrogena 96.5 0.022 4.8E-07 55.5 10.4 65 19-96 35-100 (304)
228 PRK05653 fabG 3-ketoacyl-(acyl 96.5 0.022 4.7E-07 52.1 9.9 114 20-137 5-140 (246)
229 PLN02996 fatty acyl-CoA reduct 96.5 0.055 1.2E-06 56.1 14.0 109 18-127 9-150 (491)
230 PLN02780 ketoreductase/ oxidor 96.5 0.042 9.1E-07 53.7 12.4 115 20-137 53-192 (320)
231 PRK08085 gluconate 5-dehydroge 96.5 0.025 5.3E-07 52.6 10.3 114 20-137 9-144 (254)
232 PRK07814 short chain dehydroge 96.4 0.045 9.7E-07 51.3 12.1 116 19-138 9-147 (263)
233 PRK09135 pteridine reductase; 96.4 0.037 8E-07 50.8 11.3 104 20-126 6-129 (249)
234 PF00899 ThiF: ThiF family; I 96.4 0.012 2.5E-07 50.1 7.2 35 20-56 2-36 (135)
235 PRK05650 short chain dehydroge 96.4 0.037 7.9E-07 52.0 11.4 113 21-138 1-136 (270)
236 TIGR02356 adenyl_thiF thiazole 96.4 0.02 4.4E-07 52.3 9.3 35 20-56 21-55 (202)
237 PRK05876 short chain dehydroge 96.4 0.041 8.8E-07 52.3 11.7 115 20-138 6-143 (275)
238 KOG1205 Predicted dehydrogenas 96.4 0.068 1.5E-06 51.4 13.1 121 20-144 12-156 (282)
239 PRK06841 short chain dehydroge 96.4 0.027 5.7E-07 52.2 10.2 113 19-137 14-147 (255)
240 PRK07069 short chain dehydroge 96.4 0.075 1.6E-06 48.9 13.2 114 22-138 1-138 (251)
241 PRK09291 short chain dehydroge 96.4 0.076 1.7E-06 49.1 13.3 76 21-100 3-85 (257)
242 PRK12826 3-ketoacyl-(acyl-carr 96.4 0.039 8.5E-07 50.7 11.2 113 20-137 6-141 (251)
243 PRK15469 ghrA bifunctional gly 96.4 0.035 7.5E-07 54.3 11.2 92 19-137 135-226 (312)
244 cd01078 NAD_bind_H4MPT_DH NADP 96.4 0.011 2.5E-07 53.2 7.4 76 19-97 27-106 (194)
245 PRK07832 short chain dehydroge 96.4 0.11 2.4E-06 48.8 14.5 115 21-139 1-139 (272)
246 PF03949 Malic_M: Malic enzyme 96.3 0.014 3E-07 55.3 7.8 106 20-145 25-151 (255)
247 cd05213 NAD_bind_Glutamyl_tRNA 96.3 0.025 5.5E-07 55.1 10.1 99 19-143 177-279 (311)
248 PRK06124 gluconate 5-dehydroge 96.3 0.024 5.2E-07 52.6 9.6 117 19-139 10-148 (256)
249 PRK12481 2-deoxy-D-gluconate 3 96.3 0.026 5.7E-07 52.6 9.8 115 20-138 8-143 (251)
250 PRK07890 short chain dehydroge 96.3 0.061 1.3E-06 49.8 12.3 116 19-138 4-141 (258)
251 PRK06179 short chain dehydroge 96.3 0.041 8.8E-07 51.6 11.2 111 20-138 4-132 (270)
252 PRK05884 short chain dehydroge 96.3 0.019 4.1E-07 52.8 8.7 34 21-56 1-34 (223)
253 COG2910 Putative NADH-flavin r 96.3 0.03 6.5E-07 50.4 9.4 104 21-137 1-104 (211)
254 PLN02712 arogenate dehydrogena 96.3 0.027 5.8E-07 60.6 11.0 68 16-96 48-116 (667)
255 PRK08644 thiamine biosynthesis 96.3 0.037 8E-07 51.0 10.5 35 20-56 28-62 (212)
256 PRK06924 short chain dehydroge 96.3 0.036 7.7E-07 51.3 10.5 34 21-56 2-35 (251)
257 PRK07063 short chain dehydroge 96.3 0.076 1.6E-06 49.4 12.8 116 20-138 7-145 (260)
258 PRK06057 short chain dehydroge 96.3 0.023 4.9E-07 52.9 9.2 35 20-56 7-41 (255)
259 PRK08278 short chain dehydroge 96.3 0.17 3.7E-06 47.8 15.3 116 20-139 6-150 (273)
260 PRK06128 oxidoreductase; Provi 96.3 0.051 1.1E-06 52.2 11.8 115 20-138 55-192 (300)
261 PRK12827 short chain dehydroge 96.3 0.078 1.7E-06 48.6 12.5 102 20-125 6-130 (249)
262 PRK07576 short chain dehydroge 96.3 0.053 1.1E-06 51.0 11.5 117 20-140 9-146 (264)
263 PRK06197 short chain dehydroge 96.3 0.075 1.6E-06 51.1 12.8 117 19-138 15-152 (306)
264 PRK07453 protochlorophyllide o 96.3 0.04 8.7E-07 53.4 11.0 114 20-137 6-144 (322)
265 PRK05867 short chain dehydroge 96.3 0.072 1.6E-06 49.4 12.3 114 20-137 9-145 (253)
266 PRK13243 glyoxylate reductase; 96.3 0.023 5.1E-07 56.0 9.4 92 19-137 149-240 (333)
267 cd05312 NAD_bind_1_malic_enz N 96.3 0.027 5.9E-07 54.0 9.5 120 20-165 25-165 (279)
268 PRK07666 fabG 3-ketoacyl-(acyl 96.3 0.042 9.2E-07 50.4 10.6 116 20-139 7-144 (239)
269 PRK12936 3-ketoacyl-(acyl-carr 96.2 0.024 5.2E-07 51.9 8.9 113 20-139 6-140 (245)
270 PRK05479 ketol-acid reductoiso 96.2 0.033 7.1E-07 54.8 10.2 66 19-96 16-81 (330)
271 PRK09186 flagellin modificatio 96.2 0.048 1E-06 50.4 10.9 36 19-56 3-38 (256)
272 PRK15059 tartronate semialdehy 96.2 0.018 3.9E-07 55.7 8.2 63 21-96 1-63 (292)
273 PRK07478 short chain dehydroge 96.2 0.094 2E-06 48.6 12.8 114 20-138 6-143 (254)
274 TIGR02853 spore_dpaA dipicolin 96.2 0.021 4.5E-07 55.2 8.4 96 19-142 150-246 (287)
275 PRK07574 formate dehydrogenase 96.2 0.035 7.7E-07 55.8 10.3 94 19-137 191-284 (385)
276 PRK08993 2-deoxy-D-gluconate 3 96.2 0.071 1.5E-06 49.6 11.8 115 20-138 10-145 (253)
277 PTZ00431 pyrroline carboxylate 96.2 0.024 5.2E-07 53.7 8.7 61 20-96 3-65 (260)
278 PRK12823 benD 1,6-dihydroxycyc 96.2 0.078 1.7E-06 49.3 12.1 113 20-137 8-143 (260)
279 PRK12935 acetoacetyl-CoA reduc 96.2 0.062 1.3E-06 49.5 11.3 115 20-138 6-143 (247)
280 PRK06476 pyrroline-5-carboxyla 96.2 0.027 5.8E-07 53.2 9.0 68 21-96 1-69 (258)
281 PRK08263 short chain dehydroge 96.2 0.026 5.7E-07 53.2 8.9 111 21-137 4-135 (275)
282 PLN02725 GDP-4-keto-6-deoxyman 96.2 0.014 2.9E-07 55.7 7.0 93 25-136 2-99 (306)
283 PRK06138 short chain dehydroge 96.2 0.1 2.2E-06 48.1 12.7 75 20-99 5-92 (252)
284 PF02882 THF_DHG_CYH_C: Tetrah 96.2 0.024 5.1E-07 50.1 7.9 58 18-100 34-91 (160)
285 PRK07856 short chain dehydroge 96.2 0.042 9.2E-07 51.0 10.2 109 20-138 6-135 (252)
286 PRK07904 short chain dehydroge 96.1 0.086 1.9E-06 49.3 12.3 115 19-137 7-145 (253)
287 PRK12746 short chain dehydroge 96.1 0.093 2E-06 48.5 12.4 114 20-137 6-146 (254)
288 PRK09242 tropinone reductase; 96.1 0.095 2.1E-06 48.7 12.5 117 19-138 8-147 (257)
289 PRK05993 short chain dehydroge 96.1 0.025 5.4E-07 53.6 8.7 112 21-138 5-135 (277)
290 PRK06701 short chain dehydroge 96.1 0.051 1.1E-06 52.1 10.8 116 19-138 45-182 (290)
291 TIGR00873 gnd 6-phosphoglucona 96.1 0.019 4.1E-07 59.2 8.3 97 22-138 1-99 (467)
292 TIGR03325 BphB_TodD cis-2,3-di 96.1 0.019 4.1E-07 53.7 7.7 36 19-56 4-39 (262)
293 PRK12825 fabG 3-ketoacyl-(acyl 96.1 0.049 1.1E-06 49.7 10.3 101 20-124 6-126 (249)
294 TIGR01963 PHB_DH 3-hydroxybuty 96.1 0.091 2E-06 48.4 12.2 113 21-138 2-137 (255)
295 PRK07074 short chain dehydroge 96.1 0.062 1.3E-06 49.9 11.1 112 21-138 3-136 (257)
296 PRK09009 C factor cell-cell si 96.1 0.054 1.2E-06 49.6 10.5 71 21-99 1-78 (235)
297 PRK06198 short chain dehydroge 96.1 0.13 2.8E-06 47.8 13.1 115 20-138 6-144 (260)
298 TIGR02632 RhaD_aldol-ADH rhamn 96.1 0.079 1.7E-06 57.2 13.2 116 20-137 414-552 (676)
299 cd00762 NAD_bind_malic_enz NAD 96.1 0.011 2.5E-07 55.8 5.9 123 20-166 25-167 (254)
300 PRK06196 oxidoreductase; Provi 96.1 0.061 1.3E-06 52.0 11.2 113 20-138 26-156 (315)
301 PLN02260 probable rhamnose bio 96.1 0.055 1.2E-06 58.1 11.8 91 17-129 377-474 (668)
302 PRK08219 short chain dehydroge 96.1 0.062 1.3E-06 48.6 10.6 72 21-99 4-82 (227)
303 PRK06500 short chain dehydroge 96.1 0.044 9.5E-07 50.4 9.7 101 20-127 6-125 (249)
304 PRK12475 thiamine/molybdopteri 96.1 0.042 9.1E-07 54.3 10.0 75 20-96 24-124 (338)
305 PRK08605 D-lactate dehydrogena 96.1 0.028 6.1E-07 55.4 8.8 64 19-96 145-208 (332)
306 PRK06113 7-alpha-hydroxysteroi 96.0 0.086 1.9E-06 49.0 11.7 115 20-138 11-146 (255)
307 PRK08589 short chain dehydroge 96.0 0.08 1.7E-06 49.9 11.6 113 20-138 6-141 (272)
308 cd01483 E1_enzyme_family Super 96.0 0.059 1.3E-06 46.0 9.7 33 22-56 1-33 (143)
309 PRK05557 fabG 3-ketoacyl-(acyl 96.0 0.13 2.8E-06 46.9 12.7 116 19-138 4-142 (248)
310 COG4221 Short-chain alcohol de 96.0 0.044 9.5E-07 51.4 9.4 114 21-138 7-140 (246)
311 PRK05855 short chain dehydroge 96.0 0.064 1.4E-06 55.7 11.8 117 18-138 313-452 (582)
312 PF02826 2-Hacid_dh_C: D-isome 96.0 0.014 3.1E-07 52.1 6.0 95 18-139 34-129 (178)
313 cd05311 NAD_bind_2_malic_enz N 96.0 0.048 1E-06 50.8 9.7 99 19-141 24-132 (226)
314 TIGR02415 23BDH acetoin reduct 96.0 0.086 1.9E-06 48.7 11.3 112 22-137 2-136 (254)
315 PRK09134 short chain dehydroge 96.0 0.089 1.9E-06 49.0 11.5 114 19-136 8-144 (258)
316 PRK08291 ectoine utilization p 96.0 0.031 6.8E-07 54.9 8.7 72 20-96 132-205 (330)
317 PRK07454 short chain dehydroge 96.0 0.078 1.7E-06 48.7 10.9 115 19-138 5-142 (241)
318 PRK08628 short chain dehydroge 96.0 0.12 2.7E-06 47.9 12.4 114 20-137 7-139 (258)
319 PRK08306 dipicolinate synthase 96.0 0.041 8.9E-07 53.3 9.3 67 19-96 151-218 (296)
320 PRK06949 short chain dehydroge 96.0 0.079 1.7E-06 49.1 11.0 36 19-56 8-43 (258)
321 PRK05565 fabG 3-ketoacyl-(acyl 96.0 0.079 1.7E-06 48.5 10.9 102 20-125 5-126 (247)
322 COG1090 Predicted nucleoside-d 96.0 0.069 1.5E-06 51.0 10.4 95 23-128 1-100 (297)
323 PRK00048 dihydrodipicolinate r 95.9 0.36 7.8E-06 45.7 15.5 68 20-96 1-68 (257)
324 PRK09072 short chain dehydroge 95.9 0.14 3E-06 47.8 12.6 114 20-138 5-139 (263)
325 cd01079 NAD_bind_m-THF_DH NAD 95.9 0.022 4.8E-07 51.7 6.8 77 18-100 60-138 (197)
326 PRK06398 aldose dehydrogenase; 95.9 0.026 5.5E-07 52.9 7.6 107 20-137 6-130 (258)
327 COG0345 ProC Pyrroline-5-carbo 95.9 0.056 1.2E-06 51.6 9.9 96 20-140 1-98 (266)
328 PRK08226 short chain dehydroge 95.9 0.089 1.9E-06 49.0 11.3 114 20-137 6-140 (263)
329 PRK14806 bifunctional cyclohex 95.9 0.052 1.1E-06 59.0 10.9 67 21-96 4-71 (735)
330 PRK06523 short chain dehydroge 95.9 0.015 3.3E-07 54.1 6.0 108 19-138 8-138 (260)
331 PLN03139 formate dehydrogenase 95.9 0.054 1.2E-06 54.5 10.1 94 19-137 198-291 (386)
332 PF05368 NmrA: NmrA-like famil 95.9 0.025 5.5E-07 52.0 7.3 92 23-128 1-94 (233)
333 TIGR02371 ala_DH_arch alanine 95.9 0.034 7.4E-07 54.6 8.5 70 20-95 128-199 (325)
334 TIGR01830 3oxo_ACP_reduc 3-oxo 95.9 0.054 1.2E-06 49.3 9.4 113 23-139 1-136 (239)
335 PRK06101 short chain dehydroge 95.9 0.11 2.4E-06 47.9 11.5 114 21-138 2-128 (240)
336 PRK06935 2-deoxy-D-gluconate 3 95.9 0.095 2.1E-06 48.8 11.2 116 19-138 14-150 (258)
337 PRK12742 oxidoreductase; Provi 95.9 0.066 1.4E-06 48.9 9.9 113 20-137 6-131 (237)
338 PRK07060 short chain dehydroge 95.9 0.029 6.3E-07 51.5 7.5 115 19-137 8-136 (245)
339 PRK07035 short chain dehydroge 95.9 0.07 1.5E-06 49.4 10.2 114 20-137 8-144 (252)
340 PRK06114 short chain dehydroge 95.8 0.1 2.2E-06 48.5 11.3 113 20-137 8-144 (254)
341 PRK07825 short chain dehydroge 95.8 0.054 1.2E-06 50.9 9.4 113 20-138 5-137 (273)
342 PF03435 Saccharop_dh: Sacchar 95.8 0.0074 1.6E-07 60.3 3.7 71 23-98 1-77 (386)
343 PRK07688 thiamine/molybdopteri 95.8 0.057 1.2E-06 53.4 9.8 35 20-56 24-58 (339)
344 PRK07062 short chain dehydroge 95.8 0.27 5.8E-06 45.8 14.1 116 20-138 8-146 (265)
345 PRK07677 short chain dehydroge 95.8 0.27 5.9E-06 45.5 14.0 113 21-137 2-137 (252)
346 PRK08339 short chain dehydroge 95.8 0.32 6.9E-06 45.7 14.6 114 21-138 9-144 (263)
347 PRK05872 short chain dehydroge 95.8 0.29 6.3E-06 46.9 14.5 114 20-138 9-143 (296)
348 PRK06139 short chain dehydroge 95.8 0.1 2.2E-06 51.2 11.4 113 20-137 7-142 (330)
349 PRK14194 bifunctional 5,10-met 95.8 0.029 6.2E-07 54.5 7.3 57 18-99 157-213 (301)
350 PRK05854 short chain dehydroge 95.8 0.16 3.5E-06 49.2 12.6 115 19-137 13-149 (313)
351 KOG2666 UDP-glucose/GDP-mannos 95.8 0.044 9.6E-07 53.1 8.3 77 21-101 2-91 (481)
352 PRK08223 hypothetical protein; 95.8 0.046 1E-06 52.7 8.6 35 20-56 27-61 (287)
353 PLN02350 phosphogluconate dehy 95.7 0.039 8.4E-07 57.2 8.5 98 19-139 5-109 (493)
354 TIGR02355 moeB molybdopterin s 95.7 0.065 1.4E-06 50.4 9.4 35 20-56 24-58 (240)
355 PLN00016 RNA-binding protein; 95.7 0.065 1.4E-06 53.3 9.9 37 18-56 50-90 (378)
356 PRK06728 aspartate-semialdehyd 95.7 0.023 4.9E-07 56.3 6.5 74 17-97 2-77 (347)
357 COG1712 Predicted dinucleotide 95.7 0.076 1.6E-06 49.3 9.3 95 21-140 1-96 (255)
358 PRK08324 short chain dehydroge 95.7 0.086 1.9E-06 56.9 11.4 113 20-137 422-557 (681)
359 PRK12745 3-ketoacyl-(acyl-carr 95.7 0.15 3.2E-06 47.2 11.7 34 21-56 3-36 (256)
360 PRK07577 short chain dehydroge 95.7 0.051 1.1E-06 49.5 8.4 35 20-56 3-37 (234)
361 PRK06463 fabG 3-ketoacyl-(acyl 95.7 0.16 3.4E-06 47.2 11.8 113 20-137 7-137 (255)
362 PLN02928 oxidoreductase family 95.7 0.047 1E-06 54.2 8.6 103 19-137 158-262 (347)
363 PRK08618 ornithine cyclodeamin 95.7 0.047 1E-06 53.6 8.6 72 20-96 127-200 (325)
364 PRK08277 D-mannonate oxidoredu 95.7 0.27 5.9E-06 46.2 13.6 75 20-98 10-97 (278)
365 COG1091 RfbD dTDP-4-dehydrorha 95.7 0.054 1.2E-06 52.1 8.7 95 21-137 1-99 (281)
366 PRK06200 2,3-dihydroxy-2,3-dih 95.7 0.041 8.9E-07 51.4 7.8 36 19-56 5-40 (263)
367 PRK06407 ornithine cyclodeamin 95.7 0.045 9.8E-07 53.2 8.3 72 19-95 116-189 (301)
368 cd00757 ThiF_MoeB_HesA_family 95.7 0.071 1.5E-06 49.6 9.3 35 20-56 21-55 (228)
369 PRK12824 acetoacetyl-CoA reduc 95.6 0.21 4.5E-06 45.7 12.3 114 21-138 3-139 (245)
370 TIGR03649 ergot_EASG ergot alk 95.6 0.048 1E-06 51.7 8.3 69 22-97 1-76 (285)
371 PRK08063 enoyl-(acyl carrier p 95.6 0.26 5.6E-06 45.3 13.0 114 21-138 5-141 (250)
372 PRK07023 short chain dehydroge 95.6 0.026 5.6E-07 52.1 6.2 35 20-56 1-35 (243)
373 TIGR00465 ilvC ketol-acid redu 95.6 0.079 1.7E-06 51.9 9.6 65 20-96 3-67 (314)
374 PRK08217 fabG 3-ketoacyl-(acyl 95.6 0.11 2.3E-06 47.8 10.1 35 20-56 5-39 (253)
375 PLN02712 arogenate dehydrogena 95.6 0.08 1.7E-06 57.0 10.4 67 17-96 366-433 (667)
376 PF02423 OCD_Mu_crystall: Orni 95.6 0.039 8.5E-07 53.9 7.5 70 20-95 128-199 (313)
377 PRK07109 short chain dehydroge 95.5 0.22 4.8E-06 48.8 12.8 113 20-137 8-143 (334)
378 cd01485 E1-1_like Ubiquitin ac 95.5 0.1 2.2E-06 47.6 9.6 35 20-56 19-53 (198)
379 PRK05786 fabG 3-ketoacyl-(acyl 95.5 0.09 1.9E-06 48.1 9.4 35 20-56 5-39 (238)
380 PRK08642 fabG 3-ketoacyl-(acyl 95.5 0.15 3.2E-06 47.0 10.9 34 20-55 5-38 (253)
381 PRK08703 short chain dehydroge 95.5 0.42 9.2E-06 43.8 14.0 35 20-56 6-40 (239)
382 PRK07831 short chain dehydroge 95.5 0.42 9.1E-06 44.5 14.1 79 19-99 16-108 (262)
383 PRK08936 glucose-1-dehydrogena 95.5 0.35 7.5E-06 45.1 13.5 116 19-138 6-145 (261)
384 PRK14106 murD UDP-N-acetylmura 95.5 0.096 2.1E-06 53.3 10.5 125 19-154 4-133 (450)
385 PRK07985 oxidoreductase; Provi 95.5 0.51 1.1E-05 45.2 15.0 115 21-138 50-186 (294)
386 PRK08264 short chain dehydroge 95.5 0.13 2.8E-06 47.1 10.4 113 19-139 5-134 (238)
387 PRK07340 ornithine cyclodeamin 95.5 0.051 1.1E-06 52.9 8.0 71 19-96 124-196 (304)
388 cd01080 NAD_bind_m-THF_DH_Cycl 95.5 0.043 9.2E-07 48.9 6.8 56 18-99 42-98 (168)
389 cd05212 NAD_bind_m-THF_DH_Cycl 95.5 0.055 1.2E-06 46.7 7.3 57 18-99 26-82 (140)
390 PRK05690 molybdopterin biosynt 95.5 0.13 2.8E-06 48.4 10.5 35 20-56 32-66 (245)
391 TIGR02992 ectoine_eutC ectoine 95.5 0.062 1.3E-06 52.8 8.5 72 20-96 129-202 (326)
392 PRK06125 short chain dehydroge 95.5 0.58 1.3E-05 43.5 14.8 114 20-137 7-139 (259)
393 PRK01438 murD UDP-N-acetylmura 95.5 0.13 2.9E-06 52.9 11.3 125 20-154 16-147 (480)
394 PRK06141 ornithine cyclodeamin 95.5 0.063 1.4E-06 52.4 8.5 72 19-96 124-197 (314)
395 PRK05476 S-adenosyl-L-homocyst 95.4 0.17 3.8E-06 51.5 11.8 67 19-98 211-277 (425)
396 TIGR01850 argC N-acetyl-gamma- 95.4 0.037 8.1E-07 54.8 6.9 73 21-96 1-76 (346)
397 KOG1371 UDP-glucose 4-epimeras 95.4 0.16 3.5E-06 49.5 10.8 108 20-131 2-122 (343)
398 TIGR01692 HIBADH 3-hydroxyisob 95.4 0.054 1.2E-06 52.0 7.7 60 25-96 1-60 (288)
399 TIGR01035 hemA glutamyl-tRNA r 95.4 0.058 1.3E-06 54.8 8.2 103 18-143 178-283 (417)
400 PRK06171 sorbitol-6-phosphate 95.4 0.031 6.8E-07 52.2 5.8 36 19-56 8-43 (266)
401 PRK06947 glucose-1-dehydrogena 95.3 0.27 5.8E-06 45.2 12.0 74 21-98 3-90 (248)
402 PRK05693 short chain dehydroge 95.3 0.068 1.5E-06 50.3 8.1 34 21-56 2-35 (274)
403 PRK13304 L-aspartate dehydroge 95.3 0.12 2.5E-06 49.3 9.7 67 21-96 2-69 (265)
404 PRK07097 gluconate 5-dehydroge 95.3 0.17 3.6E-06 47.4 10.7 115 20-139 10-147 (265)
405 PRK14175 bifunctional 5,10-met 95.3 0.051 1.1E-06 52.4 7.2 58 18-100 156-213 (286)
406 PRK06550 fabG 3-ketoacyl-(acyl 95.3 0.14 3E-06 46.8 9.9 107 20-137 5-126 (235)
407 COG0136 Asd Aspartate-semialde 95.3 0.081 1.8E-06 51.9 8.5 73 20-97 1-75 (334)
408 PRK07578 short chain dehydroge 95.3 0.063 1.4E-06 48.0 7.3 104 21-137 1-111 (199)
409 PRK13302 putative L-aspartate 95.3 0.06 1.3E-06 51.5 7.5 71 18-97 4-76 (271)
410 PRK03659 glutathione-regulated 95.3 0.052 1.1E-06 57.8 7.8 138 20-189 400-542 (601)
411 PRK12743 oxidoreductase; Provi 95.3 0.6 1.3E-05 43.4 14.2 114 21-138 3-140 (256)
412 PRK06940 short chain dehydroge 95.3 0.19 4.2E-06 47.6 11.0 110 22-138 4-126 (275)
413 PRK08220 2,3-dihydroxybenzoate 95.2 0.12 2.6E-06 47.7 9.2 35 20-56 8-42 (252)
414 cd00401 AdoHcyase S-adenosyl-L 95.2 0.13 2.9E-06 52.2 10.0 90 19-139 201-291 (413)
415 PRK12747 short chain dehydroge 95.2 0.6 1.3E-05 43.1 13.8 34 20-55 4-37 (252)
416 TIGR01724 hmd_rel H2-forming N 95.2 0.16 3.5E-06 49.7 10.0 66 21-96 1-89 (341)
417 PRK07792 fabG 3-ketoacyl-(acyl 95.2 0.23 4.9E-06 47.9 11.3 79 19-101 11-102 (306)
418 PRK08261 fabG 3-ketoacyl-(acyl 95.1 0.22 4.8E-06 50.6 11.7 116 20-137 210-342 (450)
419 PRK07201 short chain dehydroge 95.1 0.2 4.3E-06 53.4 11.8 113 20-137 371-508 (657)
420 PRK08177 short chain dehydroge 95.1 0.11 2.3E-06 47.5 8.5 34 21-56 2-35 (225)
421 PRK14189 bifunctional 5,10-met 95.1 0.066 1.4E-06 51.6 7.3 57 18-99 156-212 (285)
422 COG2344 AT-rich DNA-binding pr 95.1 0.069 1.5E-06 48.2 6.8 100 17-144 81-184 (211)
423 PRK06718 precorrin-2 dehydroge 95.1 0.12 2.7E-06 47.2 8.8 71 19-97 9-79 (202)
424 PRK14192 bifunctional 5,10-met 95.1 0.062 1.3E-06 51.8 7.1 57 18-99 157-213 (283)
425 COG1064 AdhP Zn-dependent alco 95.1 0.45 9.7E-06 47.0 13.0 130 17-179 164-301 (339)
426 PTZ00075 Adenosylhomocysteinas 95.1 0.1 2.2E-06 53.7 8.8 91 18-139 252-343 (476)
427 PRK06123 short chain dehydroge 95.1 0.36 7.9E-06 44.3 11.9 114 22-139 4-144 (248)
428 PRK08862 short chain dehydroge 95.0 0.73 1.6E-05 42.5 13.9 115 20-138 5-144 (227)
429 PRK07589 ornithine cyclodeamin 95.0 0.096 2.1E-06 52.0 8.3 71 20-96 129-201 (346)
430 PRK06077 fabG 3-ketoacyl-(acyl 95.0 0.52 1.1E-05 43.3 12.9 33 20-54 6-38 (252)
431 TIGR01327 PGDH D-3-phosphoglyc 95.0 0.096 2.1E-06 54.9 8.8 92 20-137 138-229 (525)
432 PLN02383 aspartate semialdehyd 95.0 0.058 1.3E-06 53.5 6.7 73 18-97 5-78 (344)
433 PRK14179 bifunctional 5,10-met 95.0 0.068 1.5E-06 51.5 7.0 58 18-100 156-213 (284)
434 PRK06598 aspartate-semialdehyd 95.0 0.12 2.5E-06 51.7 8.9 71 21-97 2-74 (369)
435 PRK08762 molybdopterin biosynt 95.0 0.15 3.2E-06 51.2 9.6 34 20-55 135-168 (376)
436 PRK06953 short chain dehydroge 94.9 0.11 2.4E-06 47.3 8.0 112 21-137 2-129 (222)
437 PRK00421 murC UDP-N-acetylmura 94.9 0.18 3.9E-06 51.7 10.4 124 19-154 6-132 (461)
438 PRK06823 ornithine cyclodeamin 94.9 0.12 2.5E-06 50.7 8.6 71 19-95 127-199 (315)
439 PRK09496 trkA potassium transp 94.9 0.079 1.7E-06 53.8 7.7 71 21-96 1-73 (453)
440 TIGR01745 asd_gamma aspartate- 94.9 0.12 2.5E-06 51.6 8.5 71 21-97 1-73 (366)
441 cd01492 Aos1_SUMO Ubiquitin ac 94.9 0.24 5.3E-06 45.1 10.1 35 20-56 21-55 (197)
442 COG0289 DapB Dihydrodipicolina 94.9 0.19 4.2E-06 47.6 9.6 75 20-95 2-76 (266)
443 PRK00045 hemA glutamyl-tRNA re 94.9 0.11 2.4E-06 52.9 8.7 105 18-144 180-287 (423)
444 PRK14173 bifunctional 5,10-met 94.9 0.086 1.9E-06 50.9 7.3 57 19-100 154-210 (287)
445 PLN02968 Probable N-acetyl-gam 94.9 0.074 1.6E-06 53.5 7.2 76 18-96 36-112 (381)
446 TIGR03736 PRTRC_ThiF PRTRC sys 94.9 0.27 5.8E-06 46.4 10.5 38 18-56 9-55 (244)
447 PRK05600 thiamine biosynthesis 94.8 0.16 3.5E-06 50.8 9.5 35 20-56 41-75 (370)
448 PRK12744 short chain dehydroge 94.8 0.59 1.3E-05 43.4 12.8 103 20-126 8-133 (257)
449 PRK14874 aspartate-semialdehyd 94.8 0.08 1.7E-06 52.2 7.2 69 21-96 2-71 (334)
450 PRK14190 bifunctional 5,10-met 94.8 0.083 1.8E-06 50.9 7.0 58 18-100 156-213 (284)
451 PLN02503 fatty acyl-CoA reduct 94.8 0.4 8.7E-06 51.1 12.8 108 19-127 118-257 (605)
452 PRK10792 bifunctional 5,10-met 94.8 0.1 2.2E-06 50.3 7.5 57 19-100 158-214 (285)
453 PRK12938 acetyacetyl-CoA reduc 94.8 0.38 8.3E-06 44.1 11.3 113 21-138 4-140 (246)
454 PRK14172 bifunctional 5,10-met 94.8 0.097 2.1E-06 50.3 7.3 57 19-100 157-213 (278)
455 TIGR01470 cysG_Nterm siroheme 94.8 0.36 7.8E-06 44.3 10.9 71 20-98 9-79 (205)
456 PRK07775 short chain dehydroge 94.8 0.8 1.7E-05 43.2 13.7 34 21-56 11-44 (274)
457 PRK05671 aspartate-semialdehyd 94.8 0.075 1.6E-06 52.5 6.8 71 19-96 3-74 (336)
458 PRK02705 murD UDP-N-acetylmura 94.8 0.15 3.3E-06 52.1 9.3 124 22-154 2-134 (459)
459 COG1052 LdhA Lactate dehydroge 94.8 0.18 3.8E-06 49.7 9.3 93 18-137 144-236 (324)
460 PRK14176 bifunctional 5,10-met 94.8 0.097 2.1E-06 50.5 7.3 57 19-100 163-219 (287)
461 PRK14177 bifunctional 5,10-met 94.7 0.094 2E-06 50.5 7.2 58 18-100 157-214 (284)
462 PLN00203 glutamyl-tRNA reducta 94.7 0.23 5E-06 51.9 10.5 106 20-143 266-375 (519)
463 PRK00141 murD UDP-N-acetylmura 94.7 0.22 4.8E-06 51.4 10.3 125 19-154 14-146 (473)
464 PRK14187 bifunctional 5,10-met 94.7 0.1 2.2E-06 50.6 7.2 58 18-100 158-215 (294)
465 PRK06046 alanine dehydrogenase 94.7 0.13 2.9E-06 50.5 8.3 71 20-96 129-201 (326)
466 PRK14180 bifunctional 5,10-met 94.7 0.11 2.3E-06 50.1 7.4 58 18-100 156-213 (282)
467 PRK13581 D-3-phosphoglycerate 94.7 0.12 2.7E-06 54.0 8.5 93 19-138 139-231 (526)
468 TIGR01831 fabG_rel 3-oxoacyl-( 94.7 0.2 4.4E-06 45.8 9.1 114 23-140 1-138 (239)
469 PRK14169 bifunctional 5,10-met 94.7 0.11 2.3E-06 50.1 7.3 58 18-100 154-211 (282)
470 COG0002 ArgC Acetylglutamate s 94.6 0.074 1.6E-06 52.3 6.2 73 20-95 2-77 (349)
471 TIGR01809 Shik-DH-AROM shikima 94.6 0.099 2.2E-06 50.3 7.1 73 19-96 124-198 (282)
472 smart00859 Semialdhyde_dh Semi 94.6 0.28 6E-06 40.7 8.9 72 22-96 1-73 (122)
473 PRK15116 sulfur acceptor prote 94.6 0.38 8.3E-06 46.0 10.9 35 20-56 30-64 (268)
474 PRK05599 hypothetical protein; 94.6 0.8 1.7E-05 42.5 13.0 116 21-140 1-139 (246)
475 PRK14170 bifunctional 5,10-met 94.6 0.11 2.4E-06 50.0 7.2 58 18-100 155-212 (284)
476 TIGR01082 murC UDP-N-acetylmur 94.6 0.29 6.3E-06 50.0 10.8 125 22-159 1-128 (448)
477 PRK01710 murD UDP-N-acetylmura 94.6 0.22 4.8E-06 51.1 10.0 124 20-154 14-142 (458)
478 PRK14166 bifunctional 5,10-met 94.6 0.12 2.5E-06 49.8 7.4 58 18-100 155-212 (282)
479 PRK05597 molybdopterin biosynt 94.5 0.28 6E-06 48.8 10.2 35 20-56 28-62 (355)
480 TIGR00936 ahcY adenosylhomocys 94.5 0.23 5E-06 50.3 9.7 92 18-139 193-284 (406)
481 PF07991 IlvN: Acetohydroxy ac 94.5 0.14 3E-06 45.3 7.1 66 19-96 3-68 (165)
482 PRK06199 ornithine cyclodeamin 94.5 0.16 3.5E-06 51.0 8.5 72 20-95 155-230 (379)
483 PRK06719 precorrin-2 dehydroge 94.5 0.44 9.5E-06 41.8 10.3 67 19-96 12-78 (157)
484 PRK15438 erythronate-4-phospha 94.5 0.16 3.4E-06 51.1 8.3 62 18-96 114-175 (378)
485 PRK15409 bifunctional glyoxyla 94.5 0.2 4.3E-06 49.3 8.9 93 19-137 144-236 (323)
486 TIGR01829 AcAcCoA_reduct aceto 94.5 0.7 1.5E-05 42.1 12.2 112 22-138 2-137 (242)
487 PRK06484 short chain dehydroge 94.5 0.11 2.5E-06 53.6 7.6 116 20-139 269-402 (520)
488 PRK06484 short chain dehydroge 94.4 0.17 3.6E-06 52.4 8.9 114 20-137 5-140 (520)
489 PRK00257 erythronate-4-phospha 94.4 0.14 3.1E-06 51.4 8.0 90 19-137 115-207 (381)
490 TIGR00518 alaDH alanine dehydr 94.4 0.12 2.6E-06 51.7 7.5 76 18-99 165-241 (370)
491 PLN02494 adenosylhomocysteinas 94.4 0.25 5.4E-06 50.8 9.7 93 19-142 253-346 (477)
492 PRK14186 bifunctional 5,10-met 94.4 0.13 2.9E-06 49.8 7.4 58 18-100 156-213 (297)
493 PRK14193 bifunctional 5,10-met 94.4 0.13 2.7E-06 49.6 7.2 57 19-100 157-215 (284)
494 PRK07878 molybdopterin biosynt 94.4 0.27 5.9E-06 49.6 9.9 35 20-56 42-76 (392)
495 TIGR02685 pter_reduc_Leis pter 94.4 0.88 1.9E-05 42.6 12.9 32 22-55 3-34 (267)
496 COG0771 MurD UDP-N-acetylmuram 94.4 0.22 4.8E-06 51.0 9.3 127 20-157 7-137 (448)
497 PRK06436 glycerate dehydrogena 94.4 0.17 3.6E-06 49.3 8.1 94 19-142 121-216 (303)
498 cd01491 Ube1_repeat1 Ubiquitin 94.4 0.35 7.6E-06 46.7 10.2 73 21-96 20-113 (286)
499 PRK14188 bifunctional 5,10-met 94.4 0.13 2.7E-06 50.0 7.1 57 18-99 156-212 (296)
500 PRK06483 dihydromonapterin red 94.4 0.51 1.1E-05 43.1 11.0 34 21-56 3-36 (236)
No 1
>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=3.1e-75 Score=537.12 Aligned_cols=318 Identities=70% Similarity=1.075 Sum_probs=306.9
Q ss_pred CCCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEc
Q 017551 16 GGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP 95 (369)
Q Consensus 16 ~~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ 95 (369)
..++..||+|+||+|+|||+++++|++++++++|.|||+..+.|++.||+|++++..+..|++..++++|+++||+|||.
T Consensus 24 ~~~~~~KVAvlGAaGGIGQPLSLLlK~np~Vs~LaLYDi~~~~GVaaDlSHI~T~s~V~g~~g~~~L~~al~~advVvIP 103 (345)
T KOG1494|consen 24 GSQRGLKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIANTPGVAADLSHINTNSSVVGFTGADGLENALKGADVVVIP 103 (345)
T ss_pred cccCcceEEEEecCCccCccHHHHHhcCcccceeeeeecccCCcccccccccCCCCceeccCChhHHHHHhcCCCEEEec
Confidence 46677899999999999999999999999999999999999999999999999999999998888999999999999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEechhcHHHHHH
Q 017551 96 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANT 175 (369)
Q Consensus 96 ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~t~Ld~~R~~~ 175 (369)
||+||||||+|+||+..|+.|+++++..+.++||+|.+.++|||+|.++|+++|++++++.|+|+|+||+|+||++|+++
T Consensus 104 AGVPRKPGMTRDDLFn~NAgIv~~l~~aia~~cP~A~i~vIsNPVNstVPIaaevlKk~G~ydpkklfGVTtLDvVRA~t 183 (345)
T KOG1494|consen 104 AGVPRKPGMTRDDLFNINAGIVKTLAAAIAKCCPNALILVISNPVNSTVPIAAEVLKKAGVYDPKKLFGVTTLDVVRANT 183 (345)
T ss_pred CCCCCCCCCcHHHhhhcchHHHHHHHHHHHhhCccceeEeecCcccccchHHHHHHHHcCCCCccceeceehhhhhhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCC-CCCceeEEeecCCCccccccccCCCCCCCCHHHHHHHHhhhccchhhhhhhhccCCchhhHHHHHHHHH
Q 017551 176 FVAEVLGLDP-RDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKF 254 (369)
Q Consensus 176 ~la~~lgv~~-~~V~~~viG~hg~~~~vp~~S~~~~~~~~~~~~~~~l~~~v~~~~~ev~~~k~g~g~~~~s~A~a~~~l 254 (369)
|+++.++++| ++++++|+|+|.+.|++|++||+.+..++++++++.++.|+|.+|+||+++|+|+||+++|||||.++|
T Consensus 184 Fv~~~~~~~p~~~v~VPVIGGHaG~TIlPLlSQ~~p~~~~~~~~~~~Lt~RiQ~gGtEVV~AKaGaGSATLSMAyAga~f 263 (345)
T KOG1494|consen 184 FVAEVLNLDPAEDVDVPVIGGHAGITIIPLLSQCKPPFRFTDDEIEALTHRIQNGGTEVVKAKAGAGSATLSMAYAGAKF 263 (345)
T ss_pred HHHHHhCCCchhcCCcceecCcCCceEeeecccCCCcccCCHHHHHHHHHHHHhCCceEEEeccCCCchhhhHHHHHHHH
Confidence 9999999999 559999999999999999999999998999999999999999999999999999999999999999999
Q ss_pred HHHHHhccCCCCceeEEEeecCCCCCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHHHHHHHhhhhhccccc
Q 017551 255 ADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQDWLGESEERVSWKH 334 (369)
Q Consensus 255 i~ai~~~~~~~~~v~~~~~~~g~~~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i~~~l~~~~~~~~~~~ 334 (369)
+++++++.++++.+..|+|+.+...+-.||++|+++|++|++++..+++|+++|+++|+.+. ++|+++ |
T Consensus 264 a~s~lrgl~G~~~v~ecafV~s~~~~~~fFaspv~Lg~~Gv~~v~~l~~lsd~E~~~l~~~~----~eLk~s-------I 332 (345)
T KOG1494|consen 264 ADSLLRGLNGDEDVVECAFVASPVTELPFFATPVTLGKKGVEEVLGLGKLSDYEEKALEAAK----PELKKS-------I 332 (345)
T ss_pred HHHHHHHhCCCCCeEEEeEEeccccCccceeceEEecCCceeeecCCCccCHHHHHHHHHHH----HHHHHH-------H
Confidence 99999999998889999999888778899999999999999999999999999999999887 999999 9
Q ss_pred ccchHhHHHh
Q 017551 335 SKGHLLQQEM 344 (369)
Q Consensus 335 ~~~~~~~~~~ 344 (369)
+||+.|++..
T Consensus 333 ~KGv~F~~~~ 342 (345)
T KOG1494|consen 333 EKGVTFVKST 342 (345)
T ss_pred HhhHHHHhhh
Confidence 9999999864
No 2
>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent. Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.
Probab=100.00 E-value=2.2e-68 Score=515.78 Aligned_cols=310 Identities=58% Similarity=0.927 Sum_probs=279.4
Q ss_pred EEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCCCCC
Q 017551 22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRK 101 (369)
Q Consensus 22 KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~p~k 101 (369)
||+||||+|+||+++++.|+.+++++||+|+|++++.|+++||+|......+..+++.+|++++++|||+||+++|.||+
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~g~a~DL~~~~~~~~i~~~~~~~~~~~~~~daDivvitaG~~~~ 80 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAAGVAADLSHIPTAASVKGFSGEEGLENALKGADVVVIPAGVPRK 80 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCCcEEEchhhcCCcCceEEEecCCCchHHHcCCCCEEEEeCCCCCC
Confidence 79999999999999999999999999999999998889999999977434555433233567899999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEechhcHHHHHHHHHHHh
Q 017551 102 PGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVL 181 (369)
Q Consensus 102 ~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~t~Ld~~R~~~~la~~l 181 (369)
|||+|++++..|++++++++++|.+++|+++++++|||+|++++++++++++.++||++||||+|+||++||+++||+++
T Consensus 81 ~g~~R~dll~~N~~I~~~i~~~i~~~~p~~iiivvsNPvDv~~~i~t~~~~~~sg~p~~rViG~g~LDsaR~r~~la~~l 160 (312)
T TIGR01772 81 PGMTRDDLFNVNAGIVKDLVAAVAESCPKAMILVITNPVNSTVPIAAEVLKKKGVYDPNKLFGVTTLDIVRANTFVAELK 160 (312)
T ss_pred CCccHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEecCchhhHHHHHHHHHHHhcCCChHHEEeeecchHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999998899999999999999
Q ss_pred CCCCCCCceeEEeecCCCccccccccCCCCCCCCHHHHHHHHhhhccchhhhhhhhccCCchhhHHHHHHHHHHHHHHhc
Q 017551 182 GLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRG 261 (369)
Q Consensus 182 gv~~~~V~~~viG~hg~~~~vp~~S~~~~~~~~~~~~~~~l~~~v~~~~~ev~~~k~g~g~~~~s~A~a~~~li~ai~~~ 261 (369)
|++|++|+++||||||+.+++|+||+++....+++++++++.++++++|++|++.|.|+|+++||+|.++++++++|+++
T Consensus 161 ~v~~~~v~~~ViGeHg~~s~vp~~S~~~~~~~~~~~~~~~i~~~v~~~g~~Ii~~k~gkg~t~~~ia~a~~~iv~ail~~ 240 (312)
T TIGR01772 161 GKDPMEVNVPVIGGHSGETIIPLISQCPGKVLFTEDQLEALIHRIQNAGTEVVKAKAGAGSATLSMAFAGARFVLSLVRG 240 (312)
T ss_pred CCCHHHeEEEEEEecCCCccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCccCCCChhHHHHHHHHHHHHHHHHh
Confidence 99999999999999987689999999986444566678999999999999999987688999999999999999999986
Q ss_pred cCCCCceeEEEeecCCC-CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHHHHHHHhhhhhcccccccchHh
Q 017551 262 LRGDAGVVECAFVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQDWLGESEERVSWKHSKGHLL 340 (369)
Q Consensus 262 ~~~~~~v~~~~~~~g~~-~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i~~~l~~~~~~~~~~~~~~~~~ 340 (369)
..+++.++++++++|+| .+++|||+||++|++|+++++++++|+++|+++|++++ +.+++. +++|+.|
T Consensus 241 ~~d~~~v~~~s~~~g~yg~~~v~~s~P~~ig~~Gv~~i~~~~~L~~~E~~~l~~S~----~~i~~~-------~~~g~~~ 309 (312)
T TIGR01772 241 LKGEEGVVECAYVESDGVTEATFFATPLLLGKNGVEKRLGIGKLSSFEEKMLNGAL----PELKKN-------IKKGEEF 309 (312)
T ss_pred hCCCccEEEEEEEccCCCcCceEEEEEEEEcCCeeEEEEccCCCCHHHHHHHHHHH----HHHHHH-------HHHHHHH
Confidence 55556799988999998 78999999999999999999985489999999999999 444555 5677777
Q ss_pred HH
Q 017551 341 QQ 342 (369)
Q Consensus 341 ~~ 342 (369)
++
T Consensus 310 ~~ 311 (312)
T TIGR01772 310 VA 311 (312)
T ss_pred hc
Confidence 65
No 3
>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=9.5e-68 Score=510.55 Aligned_cols=299 Identities=68% Similarity=1.068 Sum_probs=272.1
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCCCC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPR 100 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~p~ 100 (369)
|||+||||+|+||+++++.|+.+++.+||+|+|++.+.|+++||+|+.....++.+.+++|++++++|||+||++||.||
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~~a~g~alDL~~~~~~~~i~~~~~~~~~y~~~~daDivvitaG~~~ 80 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIVNTPGVAADLSHINTPAKVTGYLGPEELKKALKGADVVVIPAGVPR 80 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecCccceeehHhHhCCCcceEEEecCCCchHHhcCCCCEEEEeCCCCC
Confidence 69999999999999999999999999999999998678999999998754566653234567799999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEechhcHHHHHHHHHHH
Q 017551 101 KPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEV 180 (369)
Q Consensus 101 k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~t~Ld~~R~~~~la~~ 180 (369)
+|||+|+|++..|+++++++++.|.+++|++|++++|||+|++++++++++++.+++|++||||+|+||++|++++||++
T Consensus 81 k~g~tR~dll~~N~~i~~~i~~~i~~~~p~a~vivvtNPvDv~~~i~t~~~~~~s~~p~~rviG~~~LDs~R~~~~la~~ 160 (310)
T cd01337 81 KPGMTRDDLFNINAGIVRDLATAVAKACPKALILIISNPVNSTVPIAAEVLKKAGVYDPKRLFGVTTLDVVRANTFVAEL 160 (310)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCchhhHHHHHHHHHHHhcCCCHHHEEeeechHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999989999999999999
Q ss_pred hCCCCCCCceeEEeec-CCCccccccccCCCCCCCCHHHHHHHHhhhccchhhhhhhhccCCchhhHHHHHHHHHHHHHH
Q 017551 181 LGLDPRDVDVPVVGGH-AGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACL 259 (369)
Q Consensus 181 lgv~~~~V~~~viG~h-g~~~~vp~~S~~~~~~~~~~~~~~~l~~~v~~~~~ev~~~k~g~g~~~~s~A~a~~~li~ai~ 259 (369)
+|+++++|+++||||| |+ +++|+||++.+..++++++++++.++++++|++|++.|.|+|+|+||+|.++++++++|+
T Consensus 161 l~v~~~~V~~~v~GeHsGd-s~vp~~S~~~~~~~~~~~~~~~i~~~v~~~g~~Ii~~k~gkg~t~~~~a~a~~~iv~aIl 239 (310)
T cd01337 161 LGLDPAKVNVPVIGGHSGV-TILPLLSQCQPPFTFDQEEIEALTHRIQFGGDEVVKAKAGAGSATLSMAYAGARFANSLL 239 (310)
T ss_pred hCcCHHHEEEEEEecCCCC-ceecccccccccccCCHHHHHHHHHHHHHHHHHHHhCccCCCCcchhHHHHHHHHHHHHH
Confidence 9999999999999999 77 999999999875456666689999999999999999877889999999999999999999
Q ss_pred hccCCCCceeEEEeecCCCCCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHHH
Q 017551 260 RGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQ 320 (369)
Q Consensus 260 ~~~~~~~~v~~~~~~~g~~~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i~ 320 (369)
++.++++.+++|++++|+-.+++|+|+||++|++|+++++++++|+++|+++|++++..|+
T Consensus 240 ~~~~~~~~~~~~s~~~~~g~~~v~~s~P~~ig~~Gv~~i~~l~~L~~~E~~~l~~S~~~i~ 300 (310)
T cd01337 240 RGLKGEKGVIECAYVESDVTEAPFFATPVELGKNGVEKNLGLGKLNDYEKKLLEAALPELK 300 (310)
T ss_pred HhcCCCcceEEEEEEeccCCCceEEEEEEEEeCCeEEEEeCCCCCCHHHHHHHHHHHHHHH
Confidence 8866666688888777653578999999999999999999853599999999999995443
No 4
>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]
Probab=100.00 E-value=4.2e-66 Score=494.74 Aligned_cols=290 Identities=37% Similarity=0.555 Sum_probs=260.9
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCC--CeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG--AVVRGFLGQPQLENALTGMDLVIIPA 96 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~--~~v~~~~~t~dl~~al~~ADiVii~a 96 (369)
+||+|||| |+||+++++.|.++++.+||+|||+++ ++|.++||+|+.+. ...+... +.+ +++++|||+||++|
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~-~~~-y~~~~~aDiVvitA 77 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITG-DGD-YEDLKGADIVVITA 77 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEec-CCC-hhhhcCCCEEEEeC
Confidence 59999999 999999999998888888999999996 79999999999853 3344332 245 47899999999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe-chhcHHHHHH
Q 017551 97 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANT 175 (369)
Q Consensus 97 g~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~-t~Ld~~R~~~ 175 (369)
|.||||||+|+||+..|++|++++++++.++|||++++++|||+|++||++ ++.+++|++|+||. |.||++||++
T Consensus 78 G~prKpGmtR~DLl~~Na~I~~~i~~~i~~~~~d~ivlVvtNPvD~~ty~~----~k~sg~p~~rvig~gt~LDsaR~~~ 153 (313)
T COG0039 78 GVPRKPGMTRLDLLEKNAKIVKDIAKAIAKYAPDAIVLVVTNPVDILTYIA----MKFSGFPKNRVIGSGTVLDSARFRT 153 (313)
T ss_pred CCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCeEEEEecCcHHHHHHHH----HHhcCCCccceecccchHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999876 88999999999999 8999999999
Q ss_pred HHHHHhCCCCCCCceeEEeecCCCccccccccCCCCC----C----CCHHHHHHHHhhhccchhhhhhhhccCCchhhHH
Q 017551 176 FVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----S----FTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSM 247 (369)
Q Consensus 176 ~la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~----~----~~~~~~~~l~~~v~~~~~ev~~~k~g~g~~~~s~ 247 (369)
+||+++|++|++|+++|+|+||+ +++|+||++++.+ + .++++++++.++|+++|+||+++| |.| ++||+
T Consensus 154 ~lae~~~v~~~~V~~~ViGeHGd-t~vp~~S~a~v~G~pl~~~~~~~~~~~~~~i~~~v~~~g~eII~~k-G~~-t~~~~ 230 (313)
T COG0039 154 FLAEKLGVSPKDVHAYVIGEHGD-TMVPLWSQATVGGKPLEELLKEDTEEDLEELIERVRNAGAEIIEAK-GAG-TYYGP 230 (313)
T ss_pred HHHHHhCCChhHceeeEeccCCC-ceEEeeeeeeECCEEHHHHhhcccHhHHHHHHHHHHhhHHHHHHcc-Ccc-chhhH
Confidence 99999999999999999999999 9999999999854 1 234577899999999999999988 555 99999
Q ss_pred HHHHHHHHHHHHhccCCCCceeEEE-eecCCC-CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHHHHHHH
Q 017551 248 AYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQDWLG 324 (369)
Q Consensus 248 A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i~~~l~ 324 (369)
|.++++++++|++|.+ .+++++ |++|+| ++++||++|+++|++|+++++++ +|+++|+++|+.++..++..++
T Consensus 231 A~a~a~~~~ail~d~~---~vl~~s~~l~G~yg~~dv~~gvP~~lg~~Gv~~iie~-~l~~~E~~~l~~s~~~lk~~i~ 305 (313)
T COG0039 231 AAALARMVEAILRDEK---RVLPVSVYLDGEYGVEDVYFGVPAVLGKNGVEEILEL-LLSDDEQEKLDKSAEELKKNIE 305 (313)
T ss_pred HHHHHHHHHHHHcCCC---ceEEEEEeecCccCcCCeEEEeeEEEcCCCcEEEecC-CCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999874 478775 899999 89999999999999999999996 9999999999999954444443
No 5
>PLN00106 malate dehydrogenase
Probab=100.00 E-value=3.2e-64 Score=488.57 Aligned_cols=314 Identities=77% Similarity=1.174 Sum_probs=284.7
Q ss_pred hhhcccCCCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCC
Q 017551 10 AKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGM 89 (369)
Q Consensus 10 ~~~~~~~~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~A 89 (369)
+.|+..++.++.||+||||+|+||+++++.|+++++.+||+|+|++++.++++||.|+.....+..+++++|++++++||
T Consensus 8 ~~~~~~~~~~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~a~Dl~~~~~~~~i~~~~~~~d~~~~l~~a 87 (323)
T PLN00106 8 RACRAKGGAPGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVAADVSHINTPAQVRGFLGDDQLGDALKGA 87 (323)
T ss_pred hccccccCCCCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCeeEchhhhCCcCceEEEEeCCCCHHHHcCCC
Confidence 55666667788899999999999999999999999999999999998889999999988655666545577888999999
Q ss_pred cEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEechhc
Q 017551 90 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLD 169 (369)
Q Consensus 90 DiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~t~Ld 169 (369)
|+||++||.|++||++|++++..|+++++++++++.+++|+++++++|||+|.+++++++++++.+++||+|+||+|.||
T Consensus 88 DiVVitAG~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvSNPvD~~~~i~t~~~~~~s~~p~~~viG~~~LD 167 (323)
T PLN00106 88 DLVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIISNPVNSTVPIAAEVLKKAGVYDPKKLFGVTTLD 167 (323)
T ss_pred CEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCCCCcceEEEEecch
Confidence 99999999999999999999999999999999999999999999999999998777777788999999999999998899
Q ss_pred HHHHHHHHHHHhCCCCCCCceeEEeecCCCccccccccCCCCCCCCHHHHHHHHhhhccchhhhhhhhccCCchhhHHHH
Q 017551 170 VVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAY 249 (369)
Q Consensus 170 ~~R~~~~la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~~~~~~~~~~l~~~v~~~~~ev~~~k~g~g~~~~s~A~ 249 (369)
+.|+++++|+++|+++.+|+++|+||||+.+++|+||++++..++++++++++.++++++|++|++.|.|+|+++||+|.
T Consensus 168 s~Rl~~~lA~~lgv~~~~V~~~ViGeHg~~s~vp~~S~~~~~~~~~~~~~~~i~~~v~~~g~~Ii~~k~~kg~t~~~~a~ 247 (323)
T PLN00106 168 VVRANTFVAEKKGLDPADVDVPVVGGHAGITILPLLSQATPKVSFTDEEIEALTKRIQNGGTEVVEAKAGAGSATLSMAY 247 (323)
T ss_pred HHHHHHHHHHHhCCChhheEEEEEEeCCCccEeeehhcceecccCCHHHHHHHHHHHHHHHHHHHhCccCCCCchHHHHH
Confidence 99999999999999999999999999976689999999976544666679999999999999999976578999999999
Q ss_pred HHHHHHHHHHhccCCCCceeEEEeecCCCCCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 017551 250 AAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQDWL 323 (369)
Q Consensus 250 a~~~li~ai~~~~~~~~~v~~~~~~~g~~~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i~~~l 323 (369)
++++++++|++++++++.+++|++++++|.+++|||+||+||++|+++++++++|+++|+++|+.++..|++.+
T Consensus 248 a~~~ii~ail~~~~~~~~v~~~s~~~~~~~~~v~~s~P~~ig~~Gv~~i~~~~~L~~~E~~~l~~S~~~i~~~~ 321 (323)
T PLN00106 248 AAARFADACLRGLNGEADVVECSYVQSEVTELPFFASKVRLGRNGVEEVLGLGPLSEYEQKGLEALKPELKASI 321 (323)
T ss_pred HHHHHHHHHHhccCCCceEEEEEEECcccCCceEEEEEEEEcCCeeEEEcCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 99999999999887776799999888776444999999999999999999965999999999999997666544
No 6
>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=5.3e-63 Score=478.03 Aligned_cols=284 Identities=25% Similarity=0.377 Sum_probs=256.3
Q ss_pred EEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccC-C--CeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551 22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT-G--AVVRGFLGQPQLENALTGMDLVIIPA 96 (369)
Q Consensus 22 KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~-~--~~v~~~~~t~dl~~al~~ADiVii~a 96 (369)
||+|||| |+||+++|+.|+.+++++||+|+|+++ ++|+++||+|... . ..++.++ +|+ ++++|||+||++|
T Consensus 1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~--~~y-~~~~~aDivvita 76 (307)
T cd05290 1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRA--GDY-DDCADADIIVITA 76 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEE--CCH-HHhCCCCEEEECC
Confidence 8999999 999999999999999999999999987 7899999999763 2 2456553 454 7899999999999
Q ss_pred CCCCCCCCC--HHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe-chhcHHHH
Q 017551 97 GVPRKPGMT--RDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRA 173 (369)
Q Consensus 97 g~p~k~g~~--r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~-t~Ld~~R~ 173 (369)
|.||+|||+ |+|++..|+++++++++.+.+++|+++++++|||+|++|+++ ++.++||++||||+ |.||++||
T Consensus 77 G~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~~p~~i~ivvsNPvDv~t~~~----~k~sg~p~~rviG~gt~LDs~R~ 152 (307)
T cd05290 77 GPSIDPGNTDDRLDLAQTNAKIIREIMGNITKVTKEAVIILITNPLDIAVYIA----ATEFDYPANKVIGTGTMLDTARL 152 (307)
T ss_pred CCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCcHHHHHHHH----HHHhCcChhheecccchHHHHHH
Confidence 999999999 699999999999999999999999999999999999999776 78899999999999 89999999
Q ss_pred HHHHHHHhCCCCCCCceeEEeecCCCccccccccCCCCCC----------CCHHHHHHHHhhhccchhhhhhhhccCCch
Q 017551 174 NTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCS----------FTQEETEYLTNRIQNGGTEVVEAKAGAGSA 243 (369)
Q Consensus 174 ~~~la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~~----------~~~~~~~~l~~~v~~~~~ev~~~k~g~g~~ 243 (369)
++++|+++|++|++|+++||||||+ +++|+||++++.+. ..+.+++++.++++++|++|++. ||+|
T Consensus 153 ~~~la~~l~v~~~~V~~~ViGeHGd-s~vp~wS~~~v~g~~l~~~~~~~~~~~~~~~~i~~~v~~~g~~Ii~~---KG~t 228 (307)
T cd05290 153 RRIVADKYGVDPKNVTGYVLGEHGS-HAFPVWSLVNIAGLPLDELEALFGKEPIDKDELLEEVVQAAYDVFNR---KGWT 228 (307)
T ss_pred HHHHHHHhCCCcccEEEEEEecCCC-ceEEeeeeeEECCEEHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHc---cCee
Confidence 9999999999999999999999998 99999999987531 12335789999999999999994 5899
Q ss_pred hhHHHHHHHHHHHHHHhccCCCCceeEEE-eecCCC-CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHHHH
Q 017551 244 TLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQD 321 (369)
Q Consensus 244 ~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i~~ 321 (369)
+|++|+++++++++|++|.+ .+++++ +++|+| ++++|||+||+||++|+++++++ +|+++|+++|++++..|++
T Consensus 229 ~~~ia~a~~~ii~ail~d~~---~v~~vsv~~~G~yg~~~v~~svP~~ig~~Gv~~i~~l-~L~~~E~~~l~~s~~~i~~ 304 (307)
T cd05290 229 NAGIAKSASRLIKAILLDER---SILPVCTLLSGEYGLSDVALSLPTVIGAKGIERVLEI-PLDEWELEKLHKSAKAIRE 304 (307)
T ss_pred hHHHHHHHHHHHHHHHhCCC---eEEEEEEeeCCccCCCCEEEEEEEEEeCCCceEecCC-CCCHHHHHHHHHHHHHHHH
Confidence 99999999999999998754 477775 889999 78999999999999999999996 9999999999999965544
No 7
>PTZ00325 malate dehydrogenase; Provisional
Probab=100.00 E-value=3.9e-62 Score=473.61 Aligned_cols=313 Identities=60% Similarity=0.930 Sum_probs=276.7
Q ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551 18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 97 (369)
Q Consensus 18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag 97 (369)
.+..||+||||+|.||+++++.|+.++..+||+|+|++.+.++++||+|......+..++...+++++++|||+||+++|
T Consensus 6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a~Dl~~~~~~~~v~~~td~~~~~~~l~gaDvVVitaG 85 (321)
T PTZ00325 6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVAADLSHIDTPAKVTGYADGELWEKALRGADLVLICAG 85 (321)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCcccccchhhcCcCceEEEecCCCchHHHhCCCCEEEECCC
Confidence 44569999999999999999999999999999999995589999999997754444433322444689999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEechhcHHHHHHHH
Q 017551 98 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFV 177 (369)
Q Consensus 98 ~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~t~Ld~~R~~~~l 177 (369)
.|+++|++|.+++..|++++++++++|.+++|+++++++|||+|++++++.+.+++.+++||+|+||+++||++||+++|
T Consensus 86 ~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPvdv~~~~~~~~~~~~sg~p~~~viG~g~LDs~R~r~~l 165 (321)
T PTZ00325 86 VPRKPGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPVNSTVPIAAETLKKAGVYDPRKLFGVTTLDVVRARKFV 165 (321)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHHHhhhhhccCCChhheeechhHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999987555678999999999999889999999999
Q ss_pred HHHhCCCCCCCceeEEeecCCCccccccccCCCCCCCCHHHHHHHHhhhccchhhhhhhhccCCchhhHHHHHHHHHHHH
Q 017551 178 AEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADA 257 (369)
Q Consensus 178 a~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~~~~~~~~~~l~~~v~~~~~ev~~~k~g~g~~~~s~A~a~~~li~a 257 (369)
|+++|++|++|+++||||||+.+++|+||++.. ++++++++++.++++++|++|++.|.|||+|+|++|+++++++++
T Consensus 166 a~~l~v~~~~V~~~VlGeHGd~s~v~~~S~~g~--~l~~~~~~~i~~~v~~~g~~Ii~~k~~kg~t~~g~a~a~~~i~~a 243 (321)
T PTZ00325 166 AEALGMNPYDVNVPVVGGHSGVTIVPLLSQTGL--SLPEEQVEQITHRVQVGGDEVVKAKEGAGSATLSMAYAAAEWSTS 243 (321)
T ss_pred HHHhCcChhheEEEEEeecCCcccccchhccCC--CCCHHHHHHHHHHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHH
Confidence 999999999999999999998459999999943 466777999999999999999998767899999999999999999
Q ss_pred HHhccCCCCceeEEEeecCCC-CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHHHHHHHhhhhhccccccc
Q 017551 258 CLRGLRGDAGVVECAFVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQDWLGESEERVSWKHSK 336 (369)
Q Consensus 258 i~~~~~~~~~v~~~~~~~g~~-~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i~~~l~~~~~~~~~~~~~ 336 (369)
|+++.++++.++++++++|+| .+++|+|+||+||++|+++++++++|+++|+++|+++++ .+++. +++
T Consensus 244 il~~~~~~~~v~~~~~~~g~yg~~~v~~s~P~~ig~~Gv~~i~~~~~L~~~E~~~l~~S~~----~i~~~-------~~~ 312 (321)
T PTZ00325 244 VLKALRGDKGIVECAFVESDMRPECPFFSSPVELGKEGVERVLPIGPLNAYEEELLEAAVP----DLKKN-------IEK 312 (321)
T ss_pred HHhhcCCCCCeEEEEEEecCCCCCCeEEEEEEEEcCCeeEEEcCCCCCCHHHHHHHHHHHH----HHHHH-------HHH
Confidence 998855556688889999999 689999999999999999999834999999999999994 44444 556
Q ss_pred chHhHHH
Q 017551 337 GHLLQQE 343 (369)
Q Consensus 337 ~~~~~~~ 343 (369)
|+.|++.
T Consensus 313 ~~~~~~~ 319 (321)
T PTZ00325 313 GLEFARK 319 (321)
T ss_pred HHHHHhc
Confidence 6777654
No 8
>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=3.4e-62 Score=473.60 Aligned_cols=290 Identities=23% Similarity=0.320 Sum_probs=259.0
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccC-CCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT-GAVVRGFLGQPQLENALTGMDLVIIPA 96 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~-~~~v~~~~~t~dl~~al~~ADiVii~a 96 (369)
.+||+|||| |.||+++++.|+..++.+||+|||+++ +.|+++||+|+.. ....+.. .++|+ ++++|||+||+++
T Consensus 3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~-~~~dy-~~~~~adivvita 79 (312)
T cd05293 3 RNKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIE-ADKDY-SVTANSKVVIVTA 79 (312)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEE-ECCCH-HHhCCCCEEEECC
Confidence 469999998 999999999999999999999999987 7899999999873 2212332 24676 5799999999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe-chhcHHHHHH
Q 017551 97 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANT 175 (369)
Q Consensus 97 g~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~-t~Ld~~R~~~ 175 (369)
|.|++|||+|+|++.+|+++++++++.|+++||++|++++|||+|++++++ ++++++|++||||+ |.||+.|+++
T Consensus 80 G~~~k~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvsNP~d~~t~~~----~k~sg~p~~~viG~gt~Ld~~R~~~ 155 (312)
T cd05293 80 GARQNEGESRLDLVQRNVDIFKGIIPKLVKYSPNAILLVVSNPVDIMTYVA----WKLSGLPKHRVIGSGCNLDSARFRY 155 (312)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEccChHHHHHHHH----HHHhCCCHHHEEecCchHHHHHHHH
Confidence 999999999999999999999999999999999999999999999998654 78889999999999 9999999999
Q ss_pred HHHHHhCCCCCCCceeEEeecCCCccccccccCCCCCC------------CCHHHHHHHHhhhccchhhhhhhhccCCch
Q 017551 176 FVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCS------------FTQEETEYLTNRIQNGGTEVVEAKAGAGSA 243 (369)
Q Consensus 176 ~la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~~------------~~~~~~~~l~~~v~~~~~ev~~~k~g~g~~ 243 (369)
++|+++|+++++|+++||||||+ +++|+||++++.+. .++++++++.++++++|++|++. ||+|
T Consensus 156 ~la~~l~v~~~~v~~~v~GeHG~-s~vp~~S~~~i~g~~l~~~~~~~~~~~~~~~~~~i~~~v~~~g~~Ii~~---kg~t 231 (312)
T cd05293 156 LIAERLGVAPSSVHGWIIGEHGD-SSVPVWSGVNVAGVRLQDLNPDIGTDKDPEKWKEVHKQVVDSAYEVIKL---KGYT 231 (312)
T ss_pred HHHHHhCCChhhEEEEEeecCCC-CccccceeceECCEEHHHHhhhccccccHHHHHHHHHHHHHHHHHHHHh---cCCc
Confidence 99999999999999999999998 99999999988531 22345889999999999999984 5899
Q ss_pred hhHHHHHHHHHHHHHHhccCCCCceeEEE-eecCCC--CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHHH
Q 017551 244 TLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQ 320 (369)
Q Consensus 244 ~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~--~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i~ 320 (369)
+|++|+++++++++|+++.+ .+++++ +++|.| +++++||+||+||++|+++++++ +|+++|+++|++++..|+
T Consensus 232 ~~~~a~a~~~ii~ail~d~~---~~~~vsv~~~g~yg~~~d~~~svP~~ig~~Gi~~i~~l-~L~~~E~~~l~~s~~~i~ 307 (312)
T cd05293 232 SWAIGLSVADLVDAILRNTG---RVHSVSTLVKGLHGIEDEVFLSLPCILGENGITHVIKQ-PLTEEEQEKLQKSADTLW 307 (312)
T ss_pred hHHHHHHHHHHHHHHHcCCC---eEEEEEEEeCCccCCCCCeEEEEeEEEeCCceEEEecC-CCCHHHHHHHHHHHHHHH
Confidence 99999999999999998865 367665 889988 58999999999999999999995 999999999999997666
Q ss_pred HHHH
Q 017551 321 DWLG 324 (369)
Q Consensus 321 ~~l~ 324 (369)
+.++
T Consensus 308 ~~~~ 311 (312)
T cd05293 308 EVQK 311 (312)
T ss_pred HHhh
Confidence 5543
No 9
>PRK05086 malate dehydrogenase; Provisional
Probab=100.00 E-value=6.6e-62 Score=471.96 Aligned_cols=309 Identities=55% Similarity=0.862 Sum_probs=273.5
Q ss_pred CEEEEEcCCCccHHHHHHHHHh-CCCCcEEEEEeCCC-chhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKI-NPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV 98 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~-~~~~~el~L~D~~~-~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~ 98 (369)
|||+||||+|.+|+++++.+.. .+...+|+|+|+++ ..++++|+.|......+..+ ..+|++++++|+|+||+++|.
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~g~alDl~~~~~~~~i~~~-~~~d~~~~l~~~DiVIitaG~ 79 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGF-SGEDPTPALEGADVVLISAGV 79 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCcceehhhhcCCCCceEEEe-CCCCHHHHcCCCCEEEEcCCC
Confidence 6999999999999999999866 56778999999977 67788999985422344432 145777899999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEechhcHHHHHHHHH
Q 017551 99 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVA 178 (369)
Q Consensus 99 p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~t~Ld~~R~~~~la 178 (369)
|+++|++|.+++..|++++++++++|++++|+++++++|||+|+||+++++++++.+++|++||||+|+||++|++++||
T Consensus 80 ~~~~~~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvsNP~D~~t~~~~~~~~~~sg~p~~rvig~~~Lds~R~~~~ia 159 (312)
T PRK05086 80 ARKPGMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIITNPVNTTVAIAAEVLKKAGVYDKNKLFGVTTLDVIRSETFVA 159 (312)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCchHHHHHHHHHHHHHhcCCCHHHEEeeecHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCCCCCceeEEeecCCCccccccccCCCCCCCCHHHHHHHHhhhccchhhhhhhhccCCchhhHHHHHHHHHHHHH
Q 017551 179 EVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADAC 258 (369)
Q Consensus 179 ~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~~~~~~~~~~l~~~v~~~~~ev~~~k~g~g~~~~s~A~a~~~li~ai 258 (369)
+++|++|++|+++||||||+.+++|+||++ .+.++++++++++.+++++++++|++.|.|+|+|+||+|.++++++++|
T Consensus 160 ~~l~~~~~~v~~~v~GeHg~~s~~p~~S~~-~g~~l~~~~~~~i~~~v~~~g~~ii~~k~~~g~t~~~~a~a~~~~v~ai 238 (312)
T PRK05086 160 ELKGKQPGEVEVPVIGGHSGVTILPLLSQV-PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSL 238 (312)
T ss_pred HHhCCChhheEEEEEEecCCCceecccccc-CCccCCHHHHHHHHHHHHHHHHHHHhcccCCCCchhhHHHHHHHHHHHH
Confidence 999999999999999999776899999999 3335667779999999999999999987778999999999999999999
Q ss_pred HhccCCCCceeEEEeecCCCCCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHHHHHHHhhhhhcccccccch
Q 017551 259 LRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQDWLGESEERVSWKHSKGH 338 (369)
Q Consensus 259 ~~~~~~~~~v~~~~~~~g~~~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i~~~l~~~~~~~~~~~~~~~ 338 (369)
++++++++.++++++++|+-.+++|||+||+||++|+++++++++|+++|+++|++++ +.+++. +++|.
T Consensus 239 ~~~~~~~~~v~~~~~~~~~g~~~v~~s~P~~ig~~Gv~~i~~~~~L~~~E~~~l~~s~----~~i~~~-------~~~g~ 307 (312)
T PRK05086 239 VRALQGEQGVVECAYVEGDGKYARFFAQPVLLGKNGVEERLPIGTLSAFEQNALEGML----DTLKKD-------IALGE 307 (312)
T ss_pred HhcCCCCCcEEEEEEEeccCCcceEEEEEEEEcCCeeEEEcCCCCCCHHHHHHHHHHH----HHHHHH-------HHHHH
Confidence 9987666678898887775346899999999999999999996699999999999999 444444 66666
Q ss_pred HhHH
Q 017551 339 LLQQ 342 (369)
Q Consensus 339 ~~~~ 342 (369)
.|.+
T Consensus 308 ~~~~ 311 (312)
T PRK05086 308 EFVN 311 (312)
T ss_pred Hhhc
Confidence 6654
No 10
>TIGR01759 MalateDH-SF1 malate dehydrogenase. This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.
Probab=100.00 E-value=6.7e-62 Score=472.89 Aligned_cols=293 Identities=27% Similarity=0.370 Sum_probs=257.9
Q ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCCCCc-----EEEEEeCCC----chhHHHHhhcccC--CCeEEEEeCCCChhhhc
Q 017551 18 AAGFKVAILGAAGGIGQPLAMLMKINPLVS-----VLHLYDVVN----TPGVTADISHMDT--GAVVRGFLGQPQLENAL 86 (369)
Q Consensus 18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~-----el~L~D~~~----~~g~~~dL~~~~~--~~~v~~~~~t~dl~~al 86 (369)
+++.||+||||+|+||+++++.|+.+++++ ||+|+|+++ ++|+++||+|+.+ ...++.. .++ ++++
T Consensus 1 ~~p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~--~~~-~~~~ 77 (323)
T TIGR01759 1 KKPVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVAT--TDP-EEAF 77 (323)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEEe--cCh-HHHh
Confidence 468899999988999999999999999999 999999964 6899999999873 1233332 234 5899
Q ss_pred CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCC-CeEEEEecCCCCChhHHHHHHHHHhC-CCCCCcEEE
Q 017551 87 TGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNSTVPIAAEVFKKAG-TYDPKKLLG 164 (369)
Q Consensus 87 ~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNPv~~~t~i~ae~~~~~~-~~~~~kviG 164 (369)
+|||+||++||.||+|||+|++++..|++++++++++|.++|| +++++++|||+|++|+++ ++.+ +||++||||
T Consensus 78 ~daDvVVitAG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNPvDv~t~v~----~k~s~g~p~~rViG 153 (323)
T TIGR01759 78 KDVDAALLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVGNPANTNALIA----SKNAPDIPPKNFSA 153 (323)
T ss_pred CCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCcHHHHHHHH----HHHcCCCCHHHEEE
Confidence 9999999999999999999999999999999999999999998 999999999999999876 6788 999999999
Q ss_pred echhcHHHHHHHHHHHhCCCCCCCc-eeEEeecCCCccccccccCCCCC----C-CCHHH--HHHHHhhhccchhhhhhh
Q 017551 165 VTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGHAGVTILPLLSQVKPPC----S-FTQEE--TEYLTNRIQNGGTEVVEA 236 (369)
Q Consensus 165 ~t~Ld~~R~~~~la~~lgv~~~~V~-~~viG~hg~~~~vp~~S~~~~~~----~-~~~~~--~~~l~~~v~~~~~ev~~~ 236 (369)
+|.||++|||++||+++|++|++|+ .+||||||+ +++|+||++++.+ + ++++. ++++.+++++++++|++.
T Consensus 154 ~t~LDs~R~r~~la~~l~v~~~~V~~~~V~GeHG~-s~v~~~S~~~v~g~pl~~~~~~~~~~~~~i~~~v~~~g~~Ii~~ 232 (323)
T TIGR01759 154 MTRLDHNRAKYQLAAKAGVPVSDVKNVIIWGNHSN-TQVPDFTHATVDGRPVKEVIKDDKWLEGEFIPTVQQRGAAVIEA 232 (323)
T ss_pred eeHHHHHHHHHHHHHHhCcChHHeEEeEEEecCCC-ceeeccccCEECCccHHHHhcchhhHHHHHHHHHHhhHHHHHhc
Confidence 9999999999999999999999995 679999998 9999999998753 1 23333 678999999999999995
Q ss_pred hccCCchhh-HHHHHHHHHHHHHHhccCCCCceeEEE-eecC-CC--CCccEEEEEEEEcCCCeEEEcc-CCCCCHHHHH
Q 017551 237 KAGAGSATL-SMAYAAVKFADACLRGLRGDAGVVECA-FVAS-QV--TELPFFASKVRLGRQGAEEIFQ-LGPLNEYESG 310 (369)
Q Consensus 237 k~g~g~~~~-s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g-~~--~~~~~~svPv~lg~~Gv~~~~~-~~~L~~~E~~ 310 (369)
||+++| ++|.++++++++|++|.+. +.+++|+ +++| +| ++++|||+||++|++|++++++ + +|+++|++
T Consensus 233 ---kG~t~~~~~a~a~~~iv~ail~~~~~-~~v~~~s~~~~g~~Yg~~~~v~~s~P~~lg~~Gv~~iv~~l-~L~~~E~~ 307 (323)
T TIGR01759 233 ---RGASSAASAANAAIDHVRDWVTGTPE-GDWVSMGVYSDGNPYGIPEGIIFSFPVTCKGDGEWEIVEGL-PLDDFVRG 307 (323)
T ss_pred ---cCCcchHHHHHHHHHHHHHHHcCCCC-CcEEEEEEEeCCcccCCCCCeEEEEEEEEcCCeeEEEcCCC-CCCHHHHH
Confidence 578888 5889999999999999732 2488887 8899 88 5899999999999999999998 6 99999999
Q ss_pred HHHHHHHHHHHHH
Q 017551 311 LFCLLHLCFQDWL 323 (369)
Q Consensus 311 ~L~~~~~~i~~~l 323 (369)
+|+.+++.++...
T Consensus 308 ~l~~sa~~lk~~~ 320 (323)
T TIGR01759 308 KLDATEDELLEEK 320 (323)
T ss_pred HHHHHHHHHHHHH
Confidence 9999996554443
No 11
>KOG1495 consensus Lactate dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=1.6e-61 Score=444.23 Aligned_cols=286 Identities=22% Similarity=0.346 Sum_probs=262.3
Q ss_pred CCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccC---CCeEEEEeCCCChhhhcCCCcE
Q 017551 17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT---GAVVRGFLGQPQLENALTGMDL 91 (369)
Q Consensus 17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~---~~~v~~~~~t~dl~~al~~ADi 91 (369)
..+..||+|+|+ |.+|++++..+..+++.+||+|+|+++ ++|++|||+|... .+++.. .+|+ .+.+++++
T Consensus 17 ~~~~~KItVVG~-G~VGmAca~siL~k~Ladel~lvDv~~dklkGE~MDLqH~s~f~~~~~V~~---~~Dy-~~sa~S~l 91 (332)
T KOG1495|consen 17 EFKHNKITVVGV-GQVGMACAISILLKGLADELVLVDVNEDKLKGEMMDLQHGSAFLSTPNVVA---SKDY-SVSANSKL 91 (332)
T ss_pred cccCceEEEEcc-chHHHHHHHHHHHhhhhhceEEEecCcchhhhhhhhhccccccccCCceEe---cCcc-cccCCCcE
Confidence 344679999999 999999999999999999999999998 8999999999873 345543 4575 67899999
Q ss_pred EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe-chhcH
Q 017551 92 VIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDV 170 (369)
Q Consensus 92 Vii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~-t~Ld~ 170 (369)
||+|||..+++|++|++++++|+.+++.+.+++.+|.||++++++|||+|++||++ ||.+|||.+||||. |+||+
T Consensus 92 vIiTAGarq~~gesRL~lvQrNV~ifK~iip~lv~ySpd~~llvvSNPVDilTYv~----wKLSgfP~nRViGsGcnLDs 167 (332)
T KOG1495|consen 92 VIITAGARQSEGESRLDLVQRNVDIFKAIIPALVKYSPDCILLVVSNPVDILTYVT----WKLSGFPKNRVIGSGCNLDS 167 (332)
T ss_pred EEEecCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecCchHHHHHHH----HHHcCCcccceeccCcCccH
Confidence 99999999999999999999999999999999999999999999999999999865 99999999999999 99999
Q ss_pred HHHHHHHHHHhCCCCCCCceeEEeecCCCccccccccCCCCC------------CCCHHHHHHHHhhhccchhhhhhhhc
Q 017551 171 VRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC------------SFTQEETEYLTNRIQNGGTEVVEAKA 238 (369)
Q Consensus 171 ~R~~~~la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~------------~~~~~~~~~l~~~v~~~~~ev~~~k~ 238 (369)
+|||++++++||++|+++++||+||||+ +.+|+||...+.+ ..+++.|+++.+++.+.++||++.|
T Consensus 168 aRFryLi~~~Lg~~pss~hgwIiGEHGd-SsV~vWSgvniAGv~l~~l~~~~~t~~d~e~w~eihK~v~~sayeviklK- 245 (332)
T KOG1495|consen 168 ARFRYLIGNRLGVHPSSCHGWIIGEHGD-SSVPVWSGVNIAGVSLKDLNPDLGTDYDPENWKEIHKQVVDSAYEVIKLK- 245 (332)
T ss_pred HHHHHHHHHHhCCCcccceEEEeeccCC-ccceecccccccceEHhHhChhhcCCCCHHHHHHHHHHHHHHHHHHHHhc-
Confidence 9999999999999999999999999999 8999999987632 3567789999999999999999975
Q ss_pred cCCchhhHHHHHHHHHHHHHHhccCCCCceeEEE-eecCCC--CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHH
Q 017551 239 GAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLL 315 (369)
Q Consensus 239 g~g~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~--~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~ 315 (369)
|+|.|++|+++++++++|++|++. +++++ .++|.| .+|+|+|+||++|++|+..++.. +|+++|.++|+++
T Consensus 246 --GyTswaIglsva~l~~ail~n~~~---i~~Vst~~kg~~gI~~dVflSlPc~l~~~Gi~~vv~~-~Lt~~E~akL~kS 319 (332)
T KOG1495|consen 246 --GYTSWAIGLSVADLAQAILRNLRR---IHPVSTMVKGLYGIDDDVFLSLPCLLGANGITHVVKQ-KLTDEEVAKLKKS 319 (332)
T ss_pred --CchHHHHHHHHHHHHHHHHhCcCc---eeeeeeccccccCCCCceEEecceeecCCchhhhhcc-cCCHHHHHHHHHH
Confidence 999999999999999999999874 77776 679988 67999999999999999999996 9999999999999
Q ss_pred HHHH
Q 017551 316 HLCF 319 (369)
Q Consensus 316 ~~~i 319 (369)
++.+
T Consensus 320 a~tl 323 (332)
T KOG1495|consen 320 AKTL 323 (332)
T ss_pred HHHH
Confidence 9544
No 12
>PLN02602 lactate dehydrogenase
Probab=100.00 E-value=5.2e-61 Score=470.70 Aligned_cols=290 Identities=23% Similarity=0.363 Sum_probs=259.2
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccC-CCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT-GAVVRGFLGQPQLENALTGMDLVIIPAG 97 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~-~~~v~~~~~t~dl~~al~~ADiVii~ag 97 (369)
+||+|||| |.||+++++.|+.+++.+||+|+|+++ +.|+++||+|+.. ....++. +++|+ ++++|||+||++||
T Consensus 38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i~-~~~dy-~~~~daDiVVitAG 114 (350)
T PLN02602 38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKIL-ASTDY-AVTAGSDLCIVTAG 114 (350)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEEE-eCCCH-HHhCCCCEEEECCC
Confidence 69999998 999999999999999999999999988 7899999999863 2223433 23565 67999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe-chhcHHHHHHH
Q 017551 98 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTF 176 (369)
Q Consensus 98 ~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~-t~Ld~~R~~~~ 176 (369)
.||+|||+|.|++.+|++++++++++|+++||++|++++|||+|++|+++ ++.++||++||||+ |.||++|++++
T Consensus 115 ~~~k~g~tR~dll~~N~~I~~~i~~~I~~~~p~~ivivvtNPvdv~t~~~----~k~sg~p~~rviG~gt~LDs~R~r~~ 190 (350)
T PLN02602 115 ARQIPGESRLNLLQRNVALFRKIIPELAKYSPDTILLIVSNPVDVLTYVA----WKLSGFPANRVIGSGTNLDSSRFRFL 190 (350)
T ss_pred CCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCchHHHHHHH----HHHhCCCHHHEEeecchHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999765 67788999999999 68999999999
Q ss_pred HHHHhCCCCCCCceeEEeecCCCccccccccCCCCC------------CCCHHHHHHHHhhhccchhhhhhhhccCCchh
Q 017551 177 VAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC------------SFTQEETEYLTNRIQNGGTEVVEAKAGAGSAT 244 (369)
Q Consensus 177 la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~------------~~~~~~~~~l~~~v~~~~~ev~~~k~g~g~~~ 244 (369)
||+++|+++++|+++||||||+ +++|+||++++.+ .+++++++++.+++++++++|++. ||+|+
T Consensus 191 lA~~l~v~~~~V~~~ViGeHGd-s~vp~wS~~~i~G~pl~~~~~~~~~~~~~~~~~~i~~~v~~~g~eIi~~---KG~t~ 266 (350)
T PLN02602 191 IADHLDVNAQDVQAYIVGEHGD-SSVALWSSVSVGGVPVLSFLEKQQIAYEKETLEEIHRAVVDSAYEVIKL---KGYTS 266 (350)
T ss_pred HHHHhCCCccceeeeEEecCCC-ceEeeeeeeeECCEEHHHHhhccCCccCHHHHHHHHHHHHHHHHHHHhc---CCccH
Confidence 9999999999999999999998 9999999997632 133455789999999999999994 58999
Q ss_pred hHHHHHHHHHHHHHHhccCCCCceeEEE-eecCCC-C--CccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHHH
Q 017551 245 LSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-T--ELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQ 320 (369)
Q Consensus 245 ~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~--~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i~ 320 (369)
|++|+++++++++|+++.+ .+++++ +++|+| . +++|+|+||++|++|+++++++ +|+++|+++|++++..++
T Consensus 267 ~gia~a~a~ii~ail~d~~---~v~~vsv~~~g~Yg~~~~~v~~s~P~~ig~~Gi~~i~~l-~L~~~E~~~l~~sa~~l~ 342 (350)
T PLN02602 267 WAIGYSVASLVRSLLRDQR---RIHPVSVLAKGFHGIDEGDVFLSLPAQLGRNGVLGVVNV-HLTDEEAERLRKSAKTLW 342 (350)
T ss_pred HHHHHHHHHHHHHHHhcCC---CeEEEEEecccccCCCCCCcEEEEEEEEeCCeeEEEecC-CCCHHHHHHHHHHHHHHH
Confidence 9999999999999999875 488886 679998 3 7899999999999999999996 999999999999997666
Q ss_pred HHHHh
Q 017551 321 DWLGE 325 (369)
Q Consensus 321 ~~l~~ 325 (369)
+.+++
T Consensus 343 ~~~~~ 347 (350)
T PLN02602 343 EVQSQ 347 (350)
T ss_pred HHHHH
Confidence 65544
No 13
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=100.00 E-value=3.4e-60 Score=460.56 Aligned_cols=292 Identities=24% Similarity=0.388 Sum_probs=261.4
Q ss_pred CCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCC-CeEEEEeCCCChhhhcCCCcEEE
Q 017551 17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG-AVVRGFLGQPQLENALTGMDLVI 93 (369)
Q Consensus 17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~-~~v~~~~~t~dl~~al~~ADiVi 93 (369)
.++.+||+|||| |.||+++++.|+..++++||+|+|+++ ++|+++||.|+... ..+... ++++ ++++|||+||
T Consensus 3 ~~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~--~~~~-~~~~~adivI 78 (315)
T PRK00066 3 KKQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIY--AGDY-SDCKDADLVV 78 (315)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEE--eCCH-HHhCCCCEEE
Confidence 355679999999 999999999999999999999999987 78999999998732 344443 2454 7899999999
Q ss_pred EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe-chhcHHH
Q 017551 94 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVR 172 (369)
Q Consensus 94 i~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~-t~Ld~~R 172 (369)
+++|.||+|||+|.|++..|+++++++++.+.+++|++|++++|||+|++++++ ++++++|++||||+ |.||+.|
T Consensus 79 itag~~~k~g~~R~dll~~N~~i~~~i~~~i~~~~~~~~vivvsNP~d~~~~~~----~k~sg~p~~~viG~gt~LDs~R 154 (315)
T PRK00066 79 ITAGAPQKPGETRLDLVEKNLKIFKSIVGEVMASGFDGIFLVASNPVDILTYAT----WKLSGFPKERVIGSGTSLDSAR 154 (315)
T ss_pred EecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCcHHHHHHHH----HHHhCCCHHHEeecCchHHHHH
Confidence 999999999999999999999999999999999999999999999999999765 67789999999999 7899999
Q ss_pred HHHHHHHHhCCCCCCCceeEEeecCCCccccccccCCCCC-----------CCCHHHHHHHHhhhccchhhhhhhhccCC
Q 017551 173 ANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-----------SFTQEETEYLTNRIQNGGTEVVEAKAGAG 241 (369)
Q Consensus 173 ~~~~la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~-----------~~~~~~~~~l~~~v~~~~~ev~~~k~g~g 241 (369)
+++++|+++|++|++|+++||||||+ +++|+||++++.+ .+++++++++.+++++++++|++. ||
T Consensus 155 ~~~~la~~l~v~~~~V~~~viGeHG~-s~v~~~S~~~v~g~~l~~~~~~~~~~~~~~~~~i~~~v~~~g~~ii~~---kg 230 (315)
T PRK00066 155 FRYMLSEKLDVDPRSVHAYIIGEHGD-TEFPVWSHANVAGVPLEEYLEENEQYDEEDLDEIFENVRDAAYEIIEK---KG 230 (315)
T ss_pred HHHHHHHHhCCCcccEEEEEEecCCC-cceecceeceECCEEHHHHhhhccCcCHHHHHHHHHHHHHHHHHHHhc---CC
Confidence 99999999999999999999999998 9999999998753 134567889999999999999994 58
Q ss_pred chhhHHHHHHHHHHHHHHhccCCCCceeEEE-eecCCC-CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHH
Q 017551 242 SATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCF 319 (369)
Q Consensus 242 ~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i 319 (369)
++.|++|+++++++++|+++.+ .+++++ +++|+| ++++|||+||++|++|+++++++ +|+++|+++|+++++.+
T Consensus 231 ~t~~~~a~~~~~i~~ail~~~~---~v~~~sv~~~g~yg~~~v~~S~Pv~ig~~Gv~~i~~l-~L~~~E~~~L~~s~~~l 306 (315)
T PRK00066 231 ATYYGIAMALARITKAILNNEN---AVLPVSAYLEGQYGEEDVYIGVPAVVNRNGIREIVEL-PLNDDEKQKFAHSADVL 306 (315)
T ss_pred eehHHHHHHHHHHHHHHHcCCC---eEEEEEEEeccccCCCCEEEEeEEEEeCCcEEEEcCC-CCCHHHHHHHHHHHHHH
Confidence 9999999999999999999754 478776 789999 78999999999999999999996 99999999999999666
Q ss_pred HHHHH
Q 017551 320 QDWLG 324 (369)
Q Consensus 320 ~~~l~ 324 (369)
+..++
T Consensus 307 ~~~~~ 311 (315)
T PRK00066 307 KEIMD 311 (315)
T ss_pred HHHHH
Confidence 55554
No 14
>TIGR01771 L-LDH-NAD L-lactate dehydrogenase. This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.
Probab=100.00 E-value=7.5e-61 Score=461.85 Aligned_cols=279 Identities=24% Similarity=0.410 Sum_probs=251.4
Q ss_pred EEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCC--CeEEEEeCCCChhhhcCCCcEEEEcCCCCC
Q 017551 25 ILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG--AVVRGFLGQPQLENALTGMDLVIIPAGVPR 100 (369)
Q Consensus 25 IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~--~~v~~~~~t~dl~~al~~ADiVii~ag~p~ 100 (369)
|||+ |+||+++++.|+..++++||+|+|+++ ++|+++||+|+... ..++.. .++ +++++|||+||++||.||
T Consensus 1 iIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~--~~~-~~~~~daDivVitag~~r 76 (299)
T TIGR01771 1 IIGA-GNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIR--SGD-YSDCKDADLVVITAGAPQ 76 (299)
T ss_pred CCCc-CHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEe--cCC-HHHHCCCCEEEECCCCCC
Confidence 6899 999999999999999999999999987 79999999998732 234443 245 479999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe-chhcHHHHHHHHHH
Q 017551 101 KPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAE 179 (369)
Q Consensus 101 k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~-t~Ld~~R~~~~la~ 179 (369)
+|||+|+|++.+|++++++++++|++++|++++|++|||+|++|+++ ++.+++|++||||+ |.||+.|+++++|+
T Consensus 77 k~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvsNP~d~~t~~~----~~~sg~p~~~viG~gt~LDs~R~~~~la~ 152 (299)
T TIGR01771 77 KPGETRLELVGRNVRIMKSIVPEVVKSGFDGIFLVATNPVDILTYVA----WKLSGFPKNRVIGSGTVLDTARLRYLLAE 152 (299)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHH----HHHhCCCHHHEEeccchHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998665 78889999999999 88999999999999
Q ss_pred HhCCCCCCCceeEEeecCCCccccccccCCCCC----CC-------CHHHHHHHHhhhccchhhhhhhhccCCchhhHHH
Q 017551 180 VLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----SF-------TQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMA 248 (369)
Q Consensus 180 ~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~----~~-------~~~~~~~l~~~v~~~~~ev~~~k~g~g~~~~s~A 248 (369)
++|++|++|+++||||||+ +++|+||++++.+ ++ .+++++++.++++++|++|++. ||+|+|++|
T Consensus 153 ~l~v~~~~V~~~v~GeHG~-s~vp~~S~~~v~g~pl~~~~~~~~~~~~~~~~~i~~~v~~~g~~ii~~---kG~t~~~~a 228 (299)
T TIGR01771 153 KLGVDPQSVHAYIIGEHGD-SEVPVWSSATIGGVPLLDYLKAKGTETDLDLEEIEKEVRDAAYEIINR---KGATYYGIG 228 (299)
T ss_pred HhCcCcCeEEEEEEecCCC-ceeeceeeeEECCEEHHHHhhhcccccHHHHHHHHHHHHHHHHHHhhc---CCeeeHHHH
Confidence 9999999999999999998 9999999998743 11 1335779999999999999994 589999999
Q ss_pred HHHHHHHHHHHhccCCCCceeEEE-eecCCC-CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHH
Q 017551 249 YAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCF 319 (369)
Q Consensus 249 ~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i 319 (369)
.++++++++|++|.+ .+++|+ +++|+| .+++|||+||+||++|+++++++ +|+++|+++|++++..|
T Consensus 229 ~a~~~~i~ail~d~~---~v~~~s~~~~g~yg~~~~~~s~P~~ig~~Gv~~i~~l-~L~~~E~~~l~~s~~~i 297 (299)
T TIGR01771 229 MAVARIVEAILHDEN---RVLPVSAYLDGEYGIKDVYIGVPAVLGRNGVEEIIEL-PLSDEEKEAFQKSAETL 297 (299)
T ss_pred HHHHHHHHHHHcCCC---cEEEEEEEecccCCCCCEEEEEEEEEeCCeeEEEccC-CCCHHHHHHHHHHHHHH
Confidence 999999999999864 488885 889999 67899999999999999999995 99999999999998544
No 15
>PRK05442 malate dehydrogenase; Provisional
Probab=100.00 E-value=1.2e-59 Score=457.57 Aligned_cols=294 Identities=22% Similarity=0.289 Sum_probs=256.3
Q ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCCCCc-----EEEEEeCCC----chhHHHHhhcccC--CCeEEEEeCCCChhhhc
Q 017551 18 AAGFKVAILGAAGGIGQPLAMLMKINPLVS-----VLHLYDVVN----TPGVTADISHMDT--GAVVRGFLGQPQLENAL 86 (369)
Q Consensus 18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~-----el~L~D~~~----~~g~~~dL~~~~~--~~~v~~~~~t~dl~~al 86 (369)
++++||+||||+|.||+++++.|...++++ ||+|+|+++ ++|+++||+|+.+ ...++.. +++ ++++
T Consensus 2 ~~~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i~--~~~-y~~~ 78 (326)
T PRK05442 2 KAPVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVIT--DDP-NVAF 78 (326)
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEEe--cCh-HHHh
Confidence 568899999988999999999999998888 999999954 6899999999872 2234442 344 5899
Q ss_pred CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCChhHHHHHHHHHhC-CCCCCcEEE
Q 017551 87 TGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAG-TYDPKKLLG 164 (369)
Q Consensus 87 ~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~i~ae~~~~~~-~~~~~kviG 164 (369)
+|||+||++||.||+|||+|.|++..|++++++++++|.+|+ |+++++++|||+|++|+++ ++.+ +||++||||
T Consensus 79 ~daDiVVitaG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNPvDv~t~v~----~k~s~g~p~~rViG 154 (326)
T PRK05442 79 KDADVALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVGNPANTNALIA----MKNAPDLPAENFTA 154 (326)
T ss_pred CCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCCchHHHHHHH----HHHcCCCCHHHEEe
Confidence 999999999999999999999999999999999999999988 7999999999999999876 5677 999999999
Q ss_pred echhcHHHHHHHHHHHhCCCCCCCcee-EEeecCCCccccccccCCCCCC-----CCHHH--HHHHHhhhccchhhhhhh
Q 017551 165 VTMLDVVRANTFVAEVLGLDPRDVDVP-VVGGHAGVTILPLLSQVKPPCS-----FTQEE--TEYLTNRIQNGGTEVVEA 236 (369)
Q Consensus 165 ~t~Ld~~R~~~~la~~lgv~~~~V~~~-viG~hg~~~~vp~~S~~~~~~~-----~~~~~--~~~l~~~v~~~~~ev~~~ 236 (369)
+|.||++||+++||++|+++|++|+++ ||||||+ +++|+||++++.+. +++++ ++++.+++++++++|++.
T Consensus 155 ~t~LDs~R~r~~la~~l~v~~~~V~~~vV~GeHG~-s~~~~~S~~~v~g~pl~~~~~~~~~~~~~i~~~v~~~g~~Ii~~ 233 (326)
T PRK05442 155 MTRLDHNRALSQLAAKAGVPVADIKKMTVWGNHSA-TQYPDFRHATIDGKPAAEVINDQAWLEDTFIPTVQKRGAAIIEA 233 (326)
T ss_pred eeHHHHHHHHHHHHHHhCcChHHeEEeEEEECCcC-ceeeccccCEECCEEHHHHccchhhHHHHHHHHHHhhHHHHHhC
Confidence 999999999999999999999999986 5999999 99999999988642 33433 578999999999999994
Q ss_pred hccCCchhhHHHHH-HHHHHHHHHhccCCCCceeEEE-eecCCC--CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHH
Q 017551 237 KAGAGSATLSMAYA-AVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLF 312 (369)
Q Consensus 237 k~g~g~~~~s~A~a-~~~li~ai~~~~~~~~~v~~~~-~~~g~~--~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L 312 (369)
||+++|++|.+ +++++++|+++.+ ++.+++++ +++|+| ++++|||+||++| +|+++++...+|+++|+++|
T Consensus 234 ---kG~t~~~~a~~~~~~iv~ail~~~~-~~~i~~~sv~~~g~ygi~~~v~~s~P~~ig-~Gv~~iv~~l~L~~~E~~~l 308 (326)
T PRK05442 234 ---RGASSAASAANAAIDHVRDWVLGTP-EGDWVSMGVPSDGSYGIPEGLIFGFPVTCE-NGEYEIVQGLEIDDFSREKI 308 (326)
T ss_pred ---cCCccHHHHHHHHHHHHHHHHhCCC-CCeEEEEEEEecCccCCcCCeEEEEEEEEc-CcEEEEeCCCCCCHHHHHHH
Confidence 58899999999 5999999999853 22488886 679999 5899999999999 99999865249999999999
Q ss_pred HHHHHHHHHHHH
Q 017551 313 CLLHLCFQDWLG 324 (369)
Q Consensus 313 ~~~~~~i~~~l~ 324 (369)
+++++.++.+.+
T Consensus 309 ~~s~~~l~~~~~ 320 (326)
T PRK05442 309 DATLAELEEERD 320 (326)
T ss_pred HHHHHHHHHHHH
Confidence 999965554443
No 16
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=5.2e-59 Score=453.14 Aligned_cols=289 Identities=27% Similarity=0.355 Sum_probs=253.1
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCc-----EEEEEeCCC----chhHHHHhhcccC--CCeEEEEeCCCChhhhcCCC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVS-----VLHLYDVVN----TPGVTADISHMDT--GAVVRGFLGQPQLENALTGM 89 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~-----el~L~D~~~----~~g~~~dL~~~~~--~~~v~~~~~t~dl~~al~~A 89 (369)
.||+||||+|+||+++++.|+++++++ +|+|+|+++ ++++++||.|+.+ ....... ++.+++++||
T Consensus 1 ~KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~~~Dl~d~~~~~~~~~~i~---~~~~~~~~~a 77 (323)
T cd00704 1 LHVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVVMELQDCAFPLLKGVVIT---TDPEEAFKDV 77 (323)
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccceeeeehhhhcccccCCcEEe---cChHHHhCCC
Confidence 389999999999999999999999888 499999985 6899999999852 2223332 2346899999
Q ss_pred cEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCChhHHHHHHHHHhCC-CCCCcEEEech
Q 017551 90 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGT-YDPKKLLGVTM 167 (369)
Q Consensus 90 DiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~i~ae~~~~~~~-~~~~kviG~t~ 167 (369)
|+||++||.|++|||+|++++..|+++++++++.|+++| |+++++++|||+|++|+++ ++.++ +|++||||+|.
T Consensus 78 DiVVitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~----~k~sg~~p~~~vig~t~ 153 (323)
T cd00704 78 DVAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVGNPANTNALIA----LKNAPNLPPKNFTALTR 153 (323)
T ss_pred CEEEEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeCCcHHHHHHHH----HHHcCCCCHHHEEEeeH
Confidence 999999999999999999999999999999999999996 9999999999999999875 67788 59999999999
Q ss_pred hcHHHHHHHHHHHhCCCCCCC-ceeEEeecCCCccccccccCCCCCC---------CCHH-HHHHHHhhhccchhhhhhh
Q 017551 168 LDVVRANTFVAEVLGLDPRDV-DVPVVGGHAGVTILPLLSQVKPPCS---------FTQE-ETEYLTNRIQNGGTEVVEA 236 (369)
Q Consensus 168 Ld~~R~~~~la~~lgv~~~~V-~~~viG~hg~~~~vp~~S~~~~~~~---------~~~~-~~~~l~~~v~~~~~ev~~~ 236 (369)
||++|||++||++++++|++| +++||||||+ +++|+||++++.+. ++++ ..+++.+++++++++|++.
T Consensus 154 LDs~R~r~~la~~l~v~~~~V~~~~V~GeHG~-s~v~~~S~~~v~g~~~~~~~~~~~~~~~~~~~i~~~v~~~~~~Ii~~ 232 (323)
T cd00704 154 LDHNRAKAQVARKLGVRVSDVKNVIIWGNHSN-TQVPDLSNAVVYGPGGTEWVLDLLDEEWLNDEFVKTVQKRGAAIIKK 232 (323)
T ss_pred HHHHHHHHHHHHHhCcCHHHceeeeEEecccC-ceeeccccceecCccHHHhcccccChHHHHHHHHHHHHhhHHHHHhc
Confidence 999999999999999999999 5699999999 99999999987431 2222 2578999999999999995
Q ss_pred hccCCchhhH-HHHHHHHHHHHHHhccCCCCceeEEE-eecCCC---CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHH
Q 017551 237 KAGAGSATLS-MAYAAVKFADACLRGLRGDAGVVECA-FVASQV---TELPFFASKVRLGRQGAEEIFQLGPLNEYESGL 311 (369)
Q Consensus 237 k~g~g~~~~s-~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~---~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~ 311 (369)
||++.|+ +|+++++++++|++|.+++ .+++|+ +++|+| |+++|||+||++|++||+++.++ +|+++|+++
T Consensus 233 ---kg~t~~~~~a~a~~~iv~ail~~~~~~-~v~~~s~~~~g~y~gi~~~v~~s~P~~ig~~Gv~~v~~l-~L~~~E~~~ 307 (323)
T cd00704 233 ---RGASSAASAAKAIADHVKDWLFGTPPG-EIVSMGVYSPGNPYGIPPGIVFSFPCTCKGGGWHVVEDL-KLNDWLREK 307 (323)
T ss_pred ---cCcchhHHHHHHHHHHHHHHHhCCCCC-cEEEEEEEeCCccCCCCCceEEEEEEEEcCCEEEEecCC-CCCHHHHHH
Confidence 4788885 7999999999999998643 388886 889988 47999999999999999999995 999999999
Q ss_pred HHHHHHHHHHH
Q 017551 312 FCLLHLCFQDW 322 (369)
Q Consensus 312 L~~~~~~i~~~ 322 (369)
|++++..++++
T Consensus 308 l~~s~~~l~~~ 318 (323)
T cd00704 308 LKATEEELIEE 318 (323)
T ss_pred HHHHHHHHHHH
Confidence 99999544443
No 17
>PTZ00117 malate dehydrogenase; Provisional
Probab=100.00 E-value=2.4e-58 Score=448.58 Aligned_cols=295 Identities=31% Similarity=0.500 Sum_probs=262.0
Q ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCC--CeEEEEeCCCChhhhcCCCcEEE
Q 017551 18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG--AVVRGFLGQPQLENALTGMDLVI 93 (369)
Q Consensus 18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~--~~v~~~~~t~dl~~al~~ADiVi 93 (369)
.+.+||+|||| |++|+++++.++..++ .+|+|||+++ +.+.++|+.|.... ...+.. .++|++ +++|||+||
T Consensus 3 ~~~~KI~IIGa-G~vG~~ia~~l~~~~~-~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~-~~~d~~-~l~~ADiVV 78 (319)
T PTZ00117 3 VKRKKISMIGA-GQIGSTVALLILQKNL-GDVVLYDVIKGVPQGKALDLKHFSTLVGSNINIL-GTNNYE-DIKDSDVVV 78 (319)
T ss_pred CCCcEEEEECC-CHHHHHHHHHHHHCCC-CeEEEEECCCccchhHHHHHhhhccccCCCeEEE-eCCCHH-HhCCCCEEE
Confidence 34579999999 9999999999999886 6899999988 67899999997631 223332 356775 999999999
Q ss_pred EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEec-hhcHHH
Q 017551 94 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT-MLDVVR 172 (369)
Q Consensus 94 i~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~t-~Ld~~R 172 (369)
+++|.|+++|++|+|++..|.+++++++++|+++||++|++++|||+|++++++ ++.+++|++|+||+| .||++|
T Consensus 79 itag~~~~~g~~r~dll~~n~~i~~~i~~~i~~~~p~a~vivvsNP~di~t~~~----~~~s~~p~~rviG~gt~lds~R 154 (319)
T PTZ00117 79 ITAGVQRKEEMTREDLLTINGKIMKSVAESVKKYCPNAFVICVTNPLDCMVKVF----QEKSGIPSNKICGMAGVLDSSR 154 (319)
T ss_pred ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecChHHHHHHHH----HHhhCCCcccEEEecchHHHHH
Confidence 999999999999999999999999999999999999999999999999998654 778899999999995 899999
Q ss_pred HHHHHHHHhCCCCCCCceeEEeecCCCccccccccCCCCC----------CCCHHHHHHHHhhhccchhhhhhhhccCCc
Q 017551 173 ANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----------SFTQEETEYLTNRIQNGGTEVVEAKAGAGS 242 (369)
Q Consensus 173 ~~~~la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~----------~~~~~~~~~l~~~v~~~~~ev~~~k~g~g~ 242 (369)
++++||+++|++|++|+++|+||||+ +++|+||++++.+ .+.+++++++.+++++++++|++.+ |+|+
T Consensus 155 ~~~~la~~l~v~~~~v~~~viGeHg~-~~v~~~s~~~v~g~p~~~~~~~~~~~~~~~~~i~~~v~~~g~~ii~~~-~kg~ 232 (319)
T PTZ00117 155 FRCNLAEKLGVSPGDVSAVVIGGHGD-LMVPLPRYCTVNGIPLSDFVKKGAITEKEINEIIKKTRNMGGEIVKLL-KKGS 232 (319)
T ss_pred HHHHHHHHhCCCcccceEEEeecCCC-cEEeceeeceECCEEHHHHhhccccCHHHHHHHHHHHHHHHHHHHhhc-CCCC
Confidence 99999999999999999999999998 9999999998743 2456678899999999999999976 7899
Q ss_pred hhhHHHHHHHHHHHHHHhccCCCCceeEEE-eecCCC-CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHHH
Q 017551 243 ATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQ 320 (369)
Q Consensus 243 ~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i~ 320 (369)
++|++|+++++++++|++|.+ .+++++ +++|+| .+++|||+||++|++|+++++++ +|+++|+++|++++..|+
T Consensus 233 t~~~~a~a~~~~~~ail~~~~---~v~~~s~~~~g~yg~~~~~~s~P~~ig~~Gv~~i~~l-~l~~~E~~~l~~s~~~l~ 308 (319)
T PTZ00117 233 AFFAPAAAIVAMIEAYLKDEK---RVLVCSVYLNGQYNCKNLFVGVPVVIGGKGIEKVIEL-ELNAEEKELFDKSIESIQ 308 (319)
T ss_pred hHHHHHHHHHHHHHHHhcCCC---eEEEEEEEeccccCCCCeEEEEEEEEeCCeEEEEeCC-CCCHHHHHHHHHHHHHHH
Confidence 999999999999999999864 488887 889999 46899999999999999999995 999999999999997776
Q ss_pred HHHHhh
Q 017551 321 DWLGES 326 (369)
Q Consensus 321 ~~l~~~ 326 (369)
+.+++.
T Consensus 309 ~~~~~~ 314 (319)
T PTZ00117 309 ELTQKA 314 (319)
T ss_pred HHHHHH
Confidence 666544
No 18
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=100.00 E-value=1.4e-58 Score=448.26 Aligned_cols=287 Identities=24% Similarity=0.373 Sum_probs=256.0
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccC--CCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT--GAVVRGFLGQPQLENALTGMDLVIIPA 96 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~--~~~v~~~~~t~dl~~al~~ADiVii~a 96 (369)
+||+|||+ |.+|+++++.|+..++..+|+|+|++. +++.++||.|... ....... ..++ +++++||+||+++
T Consensus 1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~--~~~~-~~l~~aDIVIita 76 (306)
T cd05291 1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIK--AGDY-SDCKDADIVVITA 76 (306)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEE--cCCH-HHhCCCCEEEEcc
Confidence 39999999 999999999999999888999999987 6889999999763 2233433 2454 6799999999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe-chhcHHHHHH
Q 017551 97 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANT 175 (369)
Q Consensus 97 g~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~-t~Ld~~R~~~ 175 (369)
|.||+|||+|.+++.+|++++++++++|+++||+++++++|||+|++|+++ +++++||++||||+ |.||++|+++
T Consensus 77 g~~~~~g~~R~dll~~N~~i~~~~~~~i~~~~~~~~vivvsNP~d~~~~~~----~~~~g~p~~~v~g~gt~LDs~R~~~ 152 (306)
T cd05291 77 GAPQKPGETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVASNPVDVITYVV----QKLSGLPKNRVIGTGTSLDTARLRR 152 (306)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecChHHHHHHHH----HHHhCcCHHHEeeccchHHHHHHHH
Confidence 999999999999999999999999999999999999999999999998655 77899999999999 7899999999
Q ss_pred HHHHHhCCCCCCCceeEEeecCCCccccccccCCCCC----------CCCHHHHHHHHhhhccchhhhhhhhccCCchhh
Q 017551 176 FVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----------SFTQEETEYLTNRIQNGGTEVVEAKAGAGSATL 245 (369)
Q Consensus 176 ~la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~----------~~~~~~~~~l~~~v~~~~~ev~~~k~g~g~~~~ 245 (369)
+||+++|+++++|+++|||+||+ +++|+||++++.+ .+.+++++++.++++++|++|++. ||+++|
T Consensus 153 ~la~~l~v~~~~v~~~V~G~Hg~-s~~~~~S~~~v~g~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~ii~~---kg~t~~ 228 (306)
T cd05291 153 ALAEKLNVDPRSVHAYVLGEHGD-SQFVAWSTVTVGGKPLLDLLKEGKLSELDLDEIEEDVRKAGYEIING---KGATYY 228 (306)
T ss_pred HHHHHHCCCcccceEEEEecCCC-ceeecceeeEEcCEEHHHHhhccccChHHHHHHHHHHHHHHHHHHHc---cCccHH
Confidence 99999999999999999999998 9999999998743 133456889999999999999994 589999
Q ss_pred HHHHHHHHHHHHHHhccCCCCceeEEE-eecCCC-CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 017551 246 SMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQDWL 323 (369)
Q Consensus 246 s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i~~~l 323 (369)
++|.++++++++|+++.+ .+++++ +++|+| ++++|||+||++|++|+++++++ +|+++|+++|++++..+++.+
T Consensus 229 ~~a~a~~~~~~ail~~~~---~v~~~s~~~~g~yg~~~v~~s~P~~ig~~Gv~~i~~~-~l~~~E~~~l~~s~~~l~~~~ 304 (306)
T cd05291 229 GIATALARIVKAILNDEN---AILPVSAYLDGEYGEKDVYIGVPAIIGRNGVEEVIEL-DLTEEEQEKFEKSADIIKENI 304 (306)
T ss_pred HHHHHHHHHHHHHHcCCC---EEEEEEEEeccccCCCCEEEEEEEEEeCCCEEEEECC-CCCHHHHHHHHHHHHHHHHHh
Confidence 999999999999999754 478876 789999 78999999999999999999995 999999999999996665444
No 19
>cd00300 LDH_like L-lactate dehydrogenase-like enzymes. Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot
Probab=100.00 E-value=1.6e-58 Score=446.41 Aligned_cols=285 Identities=28% Similarity=0.414 Sum_probs=255.3
Q ss_pred EEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCC-CeEEEEeCCCChhhhcCCCcEEEEcCCCC
Q 017551 23 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG-AVVRGFLGQPQLENALTGMDLVIIPAGVP 99 (369)
Q Consensus 23 I~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~-~~v~~~~~t~dl~~al~~ADiVii~ag~p 99 (369)
|+|||+ |.||+++++.|+..+++.||+|+|+++ +.++++||.|.... ...+.+. ++|+ ++++|||+||+++|.|
T Consensus 1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~-~~~~-~~l~~aDiVIitag~p 77 (300)
T cd00300 1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVR-GGDY-ADAADADIVVITAGAP 77 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEE-CCCH-HHhCCCCEEEEcCCCC
Confidence 689999 999999999999999999999999988 78999999998743 2333333 3564 7999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe-chhcHHHHHHHHH
Q 017551 100 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVA 178 (369)
Q Consensus 100 ~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~-t~Ld~~R~~~~la 178 (369)
++|||+|.+++.+|++++++++++|+++||++|+|++|||+|++++++ ++++++|++||||+ |.||+.|+++++|
T Consensus 78 ~~~~~~R~~l~~~n~~i~~~~~~~i~~~~p~~~viv~sNP~d~~~~~~----~~~sg~~~~kviG~gt~lDs~r~~~~la 153 (300)
T cd00300 78 RKPGETRLDLINRNAPILRSVITNLKKYGPDAIILVVSNPVDILTYVA----QKLSGLPKNRVIGSGTLLDSARFRSLLA 153 (300)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccChHHHHHHHH----HHHhCcCHHHEEecCCcHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999998754 78889999999999 7899999999999
Q ss_pred HHhCCCCCCCceeEEeecCCCccccccccCCCCC-C------CCHHHHHHHHhhhccchhhhhhhhccCCchhhHHHHHH
Q 017551 179 EVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-S------FTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAA 251 (369)
Q Consensus 179 ~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~-~------~~~~~~~~l~~~v~~~~~ev~~~k~g~g~~~~s~A~a~ 251 (369)
+++|+++++|+++|+||||+ +++|+||++++.+ + .+++.++++.+++++++++|++. ||+++|++|+++
T Consensus 154 ~~l~v~~~~v~~~viGeHg~-s~v~~~S~~~v~g~p~~~~~~~~~~~~~~l~~~v~~~~~~ii~~---kg~t~~~~a~a~ 229 (300)
T cd00300 154 EKLDVDPQSVHAYVLGEHGD-SQVVAWSTATVGGLPLEELAPFTKLDLEAIEEEVRTSGYEIIRL---KGATNYGIATAI 229 (300)
T ss_pred HHhCCCcccEEEEEEeccCC-ceeeeeeeeEECCEEHHHhhcccHHHHHHHHHHHHHHHHHHHHc---cCcchHHHHHHH
Confidence 99999999999999999998 8999999998753 1 13456889999999999999994 589999999999
Q ss_pred HHHHHHHHhccCCCCceeEEE-eecCCC-CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 017551 252 VKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQDW 322 (369)
Q Consensus 252 ~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i~~~ 322 (369)
++++++|+++.+ .+++++ +++|+| ++++|||+||++|++|+++++++ +|+++|+++|++++..++..
T Consensus 230 ~~~~~ai~~~~~---~v~~~s~~~~g~yg~~~~~~s~Pv~ig~~Gi~~i~~l-~L~~~E~~~l~~s~~~l~~~ 298 (300)
T cd00300 230 ADIVKSILLDER---RVLPVSAVQEGQYGIEDVALSVPAVVGREGVVRILEI-PLTEDEEAKLQKSAEALKEV 298 (300)
T ss_pred HHHHHHHHcCCC---eEEEEEEEecCccCCCCEEEEEEEEEeCCCeEEEecC-CCCHHHHHHHHHHHHHHHHH
Confidence 999999999754 488887 679999 78999999999999999999985 99999999999999655443
No 20
>PLN00112 malate dehydrogenase (NADP); Provisional
Probab=100.00 E-value=2.3e-58 Score=461.34 Aligned_cols=288 Identities=22% Similarity=0.233 Sum_probs=254.5
Q ss_pred CCCCCEEEEEcCCCccHHHHHHHHHhC-------CCCcEEEEEeCCC--chhHHHHhhcccC--CCeEEEEeCCCChhhh
Q 017551 17 GAAGFKVAILGAAGGIGQPLAMLMKIN-------PLVSVLHLYDVVN--TPGVTADISHMDT--GAVVRGFLGQPQLENA 85 (369)
Q Consensus 17 ~~~~~KI~IiGA~G~vGs~la~~l~~~-------~~~~el~L~D~~~--~~g~~~dL~~~~~--~~~v~~~~~t~dl~~a 85 (369)
.+++.||+||||+|+||+++++.|+++ ++..||+|+|+++ ++|+++||+|+.+ ...+.+. +++ +++
T Consensus 97 ~~~~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~--~~~-ye~ 173 (444)
T PLN00112 97 WKKLINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIG--IDP-YEV 173 (444)
T ss_pred CCCCeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEe--cCC-HHH
Confidence 366789999999999999999999998 7778999999988 7999999999873 2344432 345 589
Q ss_pred cCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhh-hCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEE
Q 017551 86 LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAK-CCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLG 164 (369)
Q Consensus 86 l~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~-~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG 164 (369)
++|||+||++||.||+|||+|.|++..|+++++++++.|.+ ++|++++|++|||+|++|+++ ++.++++++|+||
T Consensus 174 ~kdaDiVVitAG~prkpG~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVsNPvDv~t~v~----~k~sg~~~~rViG 249 (444)
T PLN00112 174 FQDAEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNEVASRNVKVIVVGNPCNTNALIC----LKNAPNIPAKNFH 249 (444)
T ss_pred hCcCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcCCcHHHHHHHH----HHHcCCCCcceEE
Confidence 99999999999999999999999999999999999999999 589999999999999999776 7888999999999
Q ss_pred e-chhcHHHHHHHHHHHhCCCCCCC-ceeEEeecCCCccccccccCCCCCC-----CCHHH--HHHHHhhhccchhhhhh
Q 017551 165 V-TMLDVVRANTFVAEVLGLDPRDV-DVPVVGGHAGVTILPLLSQVKPPCS-----FTQEE--TEYLTNRIQNGGTEVVE 235 (369)
Q Consensus 165 ~-t~Ld~~R~~~~la~~lgv~~~~V-~~~viG~hg~~~~vp~~S~~~~~~~-----~~~~~--~~~l~~~v~~~~~ev~~ 235 (369)
. |.||++||+++||+++|+++++| +++||||||+ +++|+||++++.+. +++++ ++++.++++++|++|++
T Consensus 250 tgT~LDsaR~r~~LA~~l~V~~~~V~~~~V~GeHGd-sqvp~wS~a~V~G~pl~e~i~~~~~~~~ei~~~v~~~g~~Ii~ 328 (444)
T PLN00112 250 ALTRLDENRAKCQLALKAGVFYDKVSNVTIWGNHST-TQVPDFLNAKINGLPVKEVITDHKWLEEEFTPKVQKRGGVLIK 328 (444)
T ss_pred eeccHHHHHHHHHHHHHhCcCHHHcccceEEecCCC-ceeeccceeEECCccHHHhhccccchHHHHHHHHHHHHHHHHh
Confidence 9 89999999999999999999999 5699999999 99999999988541 22323 67899999999999998
Q ss_pred hhccCCchhh-HHHHHHHHHHHHHHhccCCCCceeEEE-eecC-CC--CCccEEEEEEEEcCCCeEEEc-cCCCCCHHHH
Q 017551 236 AKAGAGSATL-SMAYAAVKFADACLRGLRGDAGVVECA-FVAS-QV--TELPFFASKVRLGRQGAEEIF-QLGPLNEYES 309 (369)
Q Consensus 236 ~k~g~g~~~~-s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g-~~--~~~~~~svPv~lg~~Gv~~~~-~~~~L~~~E~ 309 (369)
. +|+++| ++|.++++++.+|+++.+. +.+++++ +++| +| +++++||+||++|++|+++++ ++ +|+++|+
T Consensus 329 ~---kG~t~~~s~a~ai~~~I~ail~~~d~-~~vlpvsv~l~G~~YGi~~dv~~SvPvvig~~Gv~~Iv~el-~L~~~E~ 403 (444)
T PLN00112 329 K---WGRSSAASTAVSIADAIKSLVTPTPE-GDWFSTGVYTDGNPYGIAEGLVFSMPCRSKGDGDYEIVKDV-EIDDYLR 403 (444)
T ss_pred c---cCchhHHHHHHHHHHHHHHHHcCCCC-CeEEEEEEEeCCcccCCCCCeEEEeEEEEeCCeeEEECCCC-CCCHHHH
Confidence 4 576766 9999999999999965543 3588886 7899 48 589999999999999999999 65 9999999
Q ss_pred HHHHHHHH
Q 017551 310 GLFCLLHL 317 (369)
Q Consensus 310 ~~L~~~~~ 317 (369)
++|++++.
T Consensus 404 ~~l~~Sa~ 411 (444)
T PLN00112 404 ERIKKSEA 411 (444)
T ss_pred HHHHHHHH
Confidence 99999994
No 21
>PTZ00082 L-lactate dehydrogenase; Provisional
Probab=100.00 E-value=1.5e-57 Score=442.97 Aligned_cols=290 Identities=33% Similarity=0.568 Sum_probs=258.3
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccC--CCeEEEEeCCCChhhhcCCCcEEEE
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT--GAVVRGFLGQPQLENALTGMDLVII 94 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~--~~~v~~~~~t~dl~~al~~ADiVii 94 (369)
+.+||+|||| |.+|+++++.++..++ .+|+|+|+++ +.+.++|+.|... ....+.. .++|+ ++++|||+||+
T Consensus 5 ~~~KI~IIGa-G~vG~~ia~~la~~gl-~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~-~~~d~-~~l~~aDiVI~ 80 (321)
T PTZ00082 5 KRRKISLIGS-GNIGGVMAYLIVLKNL-GDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVI-GTNNY-EDIAGSDVVIV 80 (321)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC-CeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEE-ECCCH-HHhCCCCEEEE
Confidence 4579999998 9999999999999887 4699999988 5788999999752 2223333 25677 68999999999
Q ss_pred cCCCCCCCCC-----CHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEec-hh
Q 017551 95 PAGVPRKPGM-----TRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT-ML 168 (369)
Q Consensus 95 ~ag~p~k~g~-----~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~t-~L 168 (369)
++|.|++||+ +|++++..|++++++++++|+++||++|+|++|||+|++++.+ ++.+++|++||||+| .|
T Consensus 81 tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~p~a~~iv~sNP~di~t~~~----~~~sg~p~~rviGlgt~l 156 (321)
T PTZ00082 81 TAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYCPNAFVIVITNPLDVMVKLL----QEHSGLPKNKVCGMAGVL 156 (321)
T ss_pred CCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHH----HHhcCCChhhEEEecCcc
Confidence 9999999999 9999999999999999999999999999999999999998654 788999999999995 79
Q ss_pred cHHHHHHHHHHHhCCCCCCCceeEEeecCCCccccccccCCCCC----------CCCHHHHHHHHhhhccchhhhhhhhc
Q 017551 169 DVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----------SFTQEETEYLTNRIQNGGTEVVEAKA 238 (369)
Q Consensus 169 d~~R~~~~la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~----------~~~~~~~~~l~~~v~~~~~ev~~~k~ 238 (369)
|+.|++++||+++|+++++|+++|+||||+ +++|+||++++.+ .+++++++++.++++++|++|++.+
T Consensus 157 ds~R~~~~la~~l~v~~~~v~~~viGeHg~-s~v~~~S~~~i~g~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~i~~~~- 234 (321)
T PTZ00082 157 DSSRLRTYIAEKLGVNPRDVHASVIGAHGD-KMVPLPRYVTVGGIPLSEFIKKGLITQEEIDEIVERTRNTGKEIVDLL- 234 (321)
T ss_pred cHHHHHHHHHHHhCCCcccceeeEEecCCC-ceEecceeeEECCEEHHHhhhcccCCHHHHHHHHHHHHHHHHHHHhhc-
Confidence 999999999999999999999999999998 9999999998743 1456678999999999999999976
Q ss_pred cCCchhhHHHHHHHHHHHHHHhccCCCCceeEEE-eecCCC-CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHH
Q 017551 239 GAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLH 316 (369)
Q Consensus 239 g~g~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~ 316 (369)
|+|+|+|++|.++++++++|++|.+ .+++|+ +++|+| .+++|+|+||+||++|+++++++ +|+++|+++|++++
T Consensus 235 gkg~t~~~ia~a~~~i~~ail~d~~---~v~~vs~~~~g~yg~~~v~~s~P~~ig~~Gv~~i~~~-~l~~~E~~~l~~sa 310 (321)
T PTZ00082 235 GTGSAYFAPAAAAIEMAEAYLKDKK---RVLPCSAYLEGQYGHKDIYMGTPAVIGANGVEKIIEL-DLTPEEQKKFDESI 310 (321)
T ss_pred CCCccHHHHHHHHHHHHHHHHcCCC---cEEEEEEEecccCCCCCeEEEEEEEEeCCeEEEEeCC-CCCHHHHHHHHHHH
Confidence 7899999999999999999999865 488887 789999 67899999999999999999995 99999999999999
Q ss_pred HHHHHH
Q 017551 317 LCFQDW 322 (369)
Q Consensus 317 ~~i~~~ 322 (369)
+.+++.
T Consensus 311 ~~i~~~ 316 (321)
T PTZ00082 311 KEVKRL 316 (321)
T ss_pred HHHHHH
Confidence 555443
No 22
>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=6e-58 Score=445.49 Aligned_cols=292 Identities=22% Similarity=0.287 Sum_probs=256.9
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCc-----EEEEEeCCC----chhHHHHhhcccC--CCeEEEEeCCCChhhhcC
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVS-----VLHLYDVVN----TPGVTADISHMDT--GAVVRGFLGQPQLENALT 87 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~-----el~L~D~~~----~~g~~~dL~~~~~--~~~v~~~~~t~dl~~al~ 87 (369)
+++||+||||+|+||+++++.|.+.++++ ||+|+|+++ ++|+++||+|+.+ ...+++. +++ +++++
T Consensus 1 ~p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~--~~~-~~~~~ 77 (322)
T cd01338 1 KPVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVIT--DDP-NVAFK 77 (322)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEe--cCc-HHHhC
Confidence 46799999999999999999999999999 999999954 6899999999873 2344443 344 58999
Q ss_pred CCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCChhHHHHHHHHHhC-CCCCCcEEEe
Q 017551 88 GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAG-TYDPKKLLGV 165 (369)
Q Consensus 88 ~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~i~ae~~~~~~-~~~~~kviG~ 165 (369)
|||+||++||.||+|||+|.+++..|++++++++++|.+++ |++++|++|||+|++|+++ ++.+ +||++||||+
T Consensus 78 daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~----~k~sg~~p~~~ViG~ 153 (322)
T cd01338 78 DADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNALIA----MKNAPDIPPDNFTAM 153 (322)
T ss_pred CCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHHH----HHHcCCCChHheEEe
Confidence 99999999999999999999999999999999999999999 5999999999999999876 5677 5999999999
Q ss_pred chhcHHHHHHHHHHHhCCCCCCCce-eEEeecCCCccccccccCCCCC---C--CCHHH--HHHHHhhhccchhhhhhhh
Q 017551 166 TMLDVVRANTFVAEVLGLDPRDVDV-PVVGGHAGVTILPLLSQVKPPC---S--FTQEE--TEYLTNRIQNGGTEVVEAK 237 (369)
Q Consensus 166 t~Ld~~R~~~~la~~lgv~~~~V~~-~viG~hg~~~~vp~~S~~~~~~---~--~~~~~--~~~l~~~v~~~~~ev~~~k 237 (369)
|.||+.||++++|+++|+++++|++ +|||+||+ +++|+||++++.+ . +.+.+ ++++.+++++++++|++.
T Consensus 154 t~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeHG~-s~vp~~S~~~v~g~pl~~~~~~~~~~~~~i~~~v~~~g~~Ii~~- 231 (322)
T cd01338 154 TRLDHNRAKSQLAKKAGVPVTDVKNMVIWGNHSP-TQYPDFTNATIGGKPAAEVINDRAWLEDEFIPTVQKRGAAIIKA- 231 (322)
T ss_pred hHHHHHHHHHHHHHHhCcChhHeEEEEEEeCCcc-cEEEehhhcEECCEeHHHhcChHhhHHHHHHHHHHhhHHHHHhC-
Confidence 9999999999999999999999998 56999998 9999999998753 1 34433 679999999999999994
Q ss_pred ccCCchhhHHH-HHHHHHHHHHHhccCCCCceeEEE-eecCCC--CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHH
Q 017551 238 AGAGSATLSMA-YAAVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFC 313 (369)
Q Consensus 238 ~g~g~~~~s~A-~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~--~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~ 313 (369)
||++.|++| +++++++++|++|.+. +.+++++ +++|+| |+++|||+||++|++|+++++++ +|+++|+++|+
T Consensus 232 --kG~t~~~~~a~a~~~iv~ail~~~~~-~~i~~~sv~~~g~yg~~~~v~~s~P~~ig~~Gv~~i~~l-~L~~~E~~~l~ 307 (322)
T cd01338 232 --RGASSAASAANAAIDHMRDWVLGTPE-GDWFSMAVPSDGSYGIPEGLIFSFPVRSKGGGYEIVEGL-EIDDFAREKID 307 (322)
T ss_pred --cCCccHHHHHHHHHHHHHHHhcCCCC-CeEEEEEEEccCccCCCCCeEEEEEEEEeCCEEEEEeCC-CCCHHHHHHHH
Confidence 588999999 6999999999998852 2488886 679999 58999999999999999999996 99999999999
Q ss_pred HHHHHHHHHH
Q 017551 314 LLHLCFQDWL 323 (369)
Q Consensus 314 ~~~~~i~~~l 323 (369)
++++.++.+-
T Consensus 308 ~s~~~l~~~~ 317 (322)
T cd01338 308 ATLAELLEER 317 (322)
T ss_pred HHHHHHHHHH
Confidence 9995554443
No 23
>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent. This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.
Probab=100.00 E-value=8.5e-58 Score=451.16 Aligned_cols=290 Identities=21% Similarity=0.237 Sum_probs=252.1
Q ss_pred CCCCCEEEEEcCCCccHHHHHHHHHhCCCCc-----EEEEE--eCCC--chhHHHHhhcccC--CCeEEEEeCCCChhhh
Q 017551 17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVS-----VLHLY--DVVN--TPGVTADISHMDT--GAVVRGFLGQPQLENA 85 (369)
Q Consensus 17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~-----el~L~--D~~~--~~g~~~dL~~~~~--~~~v~~~~~t~dl~~a 85 (369)
.+++.||+||||+|+||+++++.|...++++ +|+|+ |++. ++|+++||.|+.+ ...+... +++ +++
T Consensus 41 ~~~p~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~--~~~-y~~ 117 (387)
T TIGR01757 41 WKKTVNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIG--IDP-YEV 117 (387)
T ss_pred CCCCeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEe--cCC-HHH
Confidence 4567899999999999999999999999888 67777 5555 7899999999872 2334432 345 589
Q ss_pred cCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEE
Q 017551 86 LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLG 164 (369)
Q Consensus 86 l~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG 164 (369)
++|||+||++||.||+|||+|.+++..|+++++++++.|.+++ |++++|++|||+|++|+++ ++.++++|+|+||
T Consensus 118 ~kdaDIVVitAG~prkpg~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVsNPvDv~t~v~----~k~sg~~~~rviG 193 (387)
T TIGR01757 118 FEDADWALLIGAKPRGPGMERADLLDINGQIFADQGKALNAVASKNCKVLVVGNPCNTNALIA----MKNAPNIPRKNFH 193 (387)
T ss_pred hCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCcHHHHHHHH----HHHcCCCcccEEE
Confidence 9999999999999999999999999999999999999999987 9999999999999999776 6788999999999
Q ss_pred e-chhcHHHHHHHHHHHhCCCCCCCc-eeEEeecCCCccccccccCCCCC-C----CCHHH--HHHHHhhhccchhhhhh
Q 017551 165 V-TMLDVVRANTFVAEVLGLDPRDVD-VPVVGGHAGVTILPLLSQVKPPC-S----FTQEE--TEYLTNRIQNGGTEVVE 235 (369)
Q Consensus 165 ~-t~Ld~~R~~~~la~~lgv~~~~V~-~~viG~hg~~~~vp~~S~~~~~~-~----~~~~~--~~~l~~~v~~~~~ev~~ 235 (369)
. |.||++|||++||+++++++++|+ ++||||||+ +++|+||++++.+ + +++.+ ++++.++++++|++|++
T Consensus 194 ~gT~LDsaR~r~~LA~~l~v~~~~V~~~~V~GeHGd-s~vp~~S~a~V~G~pl~~~~~~~~~~~~ei~~~v~~~g~eIi~ 272 (387)
T TIGR01757 194 ALTRLDENRAKCQLALKSGKFYTSVSNVTIWGNHST-TQVPDFVNAKIGGRPAKEVIKDTKWLEEEFTPTVQKRGGALIK 272 (387)
T ss_pred ecchhHHHHHHHHHHHHHCcChhHcceeEEEecCCC-cEEecceeeEECCEEhHHhcccccchHHHHHHHHHHHHHHHHh
Confidence 9 899999999999999999999995 999999998 9999999998753 1 22222 67899999999999998
Q ss_pred hhccCCchhh-HHHHHHHHHHHHHHhccCCCCceeEEE-eecCC-C--CCccEEEEEEEEcCCCeEEEc-cCCCCCHHHH
Q 017551 236 AKAGAGSATL-SMAYAAVKFADACLRGLRGDAGVVECA-FVASQ-V--TELPFFASKVRLGRQGAEEIF-QLGPLNEYES 309 (369)
Q Consensus 236 ~k~g~g~~~~-s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~-~--~~~~~~svPv~lg~~Gv~~~~-~~~~L~~~E~ 309 (369)
. ||+++| ++|.++++++.+|++|.+. +.+++++ +++|+ | +++++||+||++|++|+++++ ++ +|+++|+
T Consensus 273 ~---KG~t~~~s~a~ai~~~i~ai~~g~d~-~~il~vsv~~~Ge~YGi~~gv~~S~Pvvig~~Gv~~Iv~~l-~L~~~E~ 347 (387)
T TIGR01757 273 K---WGRSSAASTAVSIADAIKSLVVPTPE-GDWFSTGVYTDGNPYGIAEGLVFSMPCRSKGDGDYELATDV-SMDDFLR 347 (387)
T ss_pred c---cCchhHHHHHHHHHHHHHHHhcCCCC-CeEEEEEEEeCCcccCCCCCEEEEEEEEEeCCEEEEECCCC-CCCHHHH
Confidence 4 566666 9999999999999965543 3488886 77996 8 589999999999999999996 75 9999999
Q ss_pred HHHHHHHHHH
Q 017551 310 GLFCLLHLCF 319 (369)
Q Consensus 310 ~~L~~~~~~i 319 (369)
++|++++..+
T Consensus 348 ~~l~~Sa~~L 357 (387)
T TIGR01757 348 ERIRKSEDEL 357 (387)
T ss_pred HHHHHHHHHH
Confidence 9999999544
No 24
>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent. The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.
Probab=100.00 E-value=1.3e-57 Score=440.79 Aligned_cols=287 Identities=30% Similarity=0.504 Sum_probs=256.4
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccC----CCeEEEEeCCCChhhhcCCCcEEEE
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT----GAVVRGFLGQPQLENALTGMDLVII 94 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~----~~~v~~~~~t~dl~~al~~ADiVii 94 (369)
+||+|||+ |.||+.+|+.++.+++. +|+|+|+++ ..+.++|+.|... ..+++. ++|++ ++++||+||+
T Consensus 2 ~KV~VIGa-G~vG~~iA~~la~~g~~-~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~i~~---t~d~~-~~~~aDiVIi 75 (305)
T TIGR01763 2 KKISVIGA-GFVGATTAFRLAEKELA-DLVLLDVVEGIPQGKALDMYEASPVGGFDTKVTG---TNNYA-DTANSDIVVI 75 (305)
T ss_pred CEEEEECc-CHHHHHHHHHHHHcCCC-eEEEEeCCCChhHHHHHhhhhhhhccCCCcEEEe---cCCHH-HhCCCCEEEE
Confidence 69999999 99999999999999877 799999987 5678888887642 223432 56774 5999999999
Q ss_pred cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe-chhcHHHH
Q 017551 95 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRA 173 (369)
Q Consensus 95 ~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~-t~Ld~~R~ 173 (369)
++|.|+++|++|++++..|++++++++++|.+++|++++|++|||+|++++++ ++.+|+|++||||+ |.||++|+
T Consensus 76 tag~p~~~~~sR~~l~~~N~~iv~~i~~~I~~~~p~~~iIv~tNP~di~t~~~----~~~sg~~~~rviG~g~~lds~R~ 151 (305)
T TIGR01763 76 TAGLPRKPGMSREDLLSMNAGIVREVTGRIMEHSPNPIIVVVSNPLDAMTYVA----WQKSGFPKERVIGQAGVLDSARF 151 (305)
T ss_pred cCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHH----HHHHCcCHHHEEEeccchHHHHH
Confidence 99999999999999999999999999999999999999999999999998765 78889999999999 57999999
Q ss_pred HHHHHHHhCCCCCCCceeEEeecCCCccccccccCCCCCC-----CCHHHHHHHHhhhccchhhhhhhhccCCchhhHHH
Q 017551 174 NTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCS-----FTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMA 248 (369)
Q Consensus 174 ~~~la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~~-----~~~~~~~~l~~~v~~~~~ev~~~k~g~g~~~~s~A 248 (369)
+++||++|++++++|+++||||||+ +++|+||++++.+. ++++.++++.++++++|++|++++ |+|+++|++|
T Consensus 152 ~~~la~~l~v~~~~v~~~v~GeHg~-s~~~~wS~~~i~g~~~~~~~~~~~~~~l~~~v~~~g~~ii~~~-~kg~t~~~~a 229 (305)
T TIGR01763 152 RTFIAMELGVSVQDVTACVLGGHGD-AMVPLVRYSTVAGIPVADLISAERIAEIVERTRKGGGEIVNLL-KQGSAYYAPA 229 (305)
T ss_pred HHHHHHHhCcCHHHeeeeEEecCCC-cEEeeeeeeEECCEEHHHhcCHHHHHHHHHHHHHHHHHHHHhc-CCCChHHHHH
Confidence 9999999999999999999999999 99999999987541 344558999999999999999976 7899999999
Q ss_pred HHHHHHHHHHHhccCCCCceeEEE-eecCCC-CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 017551 249 YAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQDWL 323 (369)
Q Consensus 249 ~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i~~~l 323 (369)
.++++++++|++|.+ .+++++ +++|+| .+++|+|+||+||++|+++++++ +|+++|+++|+++++.|++.+
T Consensus 230 ~~~~~i~~ai~~~~~---~v~~~s~~~~~~yg~~~v~~s~P~~ig~~Gv~~i~~~-~l~~~E~~~l~~s~~~i~~~~ 302 (305)
T TIGR01763 230 ASVVEMVEAILKDRK---RVLPCAAYLDGQYGIDGIYVGVPVILGKNGVEHIYEL-KLDQSELALLNKSAKIVDENC 302 (305)
T ss_pred HHHHHHHHHHhCCCC---eEEEEEEEecccCCCCceEEEEEEEEeCCeEEEEeCC-CCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999865 488886 789999 68999999999999999999996 999999999999996555444
No 25
>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=1.1e-56 Score=435.10 Aligned_cols=287 Identities=28% Similarity=0.432 Sum_probs=257.3
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccC-CCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT-GAVVRGFLGQPQLENALTGMDLVIIPAG 97 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~-~~~v~~~~~t~dl~~al~~ADiVii~ag 97 (369)
|||+|||+ |.+|+++++.|+.+++..+|+|+|++. +.+.++|+.|... ......+ ++|+ +++++||+||+++|
T Consensus 1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~--~~d~-~~l~~aDiViita~ 76 (308)
T cd05292 1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIY--AGDY-ADCKGADVVVITAG 76 (308)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEe--eCCH-HHhCCCCEEEEccC
Confidence 69999999 999999999999999889999999987 6789999998752 2233443 3565 78999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe-chhcHHHHHHH
Q 017551 98 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTF 176 (369)
Q Consensus 98 ~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~-t~Ld~~R~~~~ 176 (369)
.|+++|++|.+++.+|+++++++++.+++++|+++++++|||+|++++++ ++.+|||++||||+ |.||+.|++++
T Consensus 77 ~~~~~~~~r~dl~~~n~~i~~~~~~~l~~~~~~giiiv~tNP~d~~~~~~----~~~sg~p~~~viG~gt~LDs~R~~~~ 152 (308)
T cd05292 77 ANQKPGETRLDLLKRNVAIFKEIIPQILKYAPDAILLVVTNPVDVLTYVA----YKLSGLPPNRVIGSGTVLDTARFRYL 152 (308)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHH----HHHHCcCHHHeecccchhhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999765 67889999999999 89999999999
Q ss_pred HHHHhCCCCCCCceeEEeecCCCccccccccCCCCC------------CCCHHHHHHHHhhhccchhhhhhhhccCCchh
Q 017551 177 VAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC------------SFTQEETEYLTNRIQNGGTEVVEAKAGAGSAT 244 (369)
Q Consensus 177 la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~------------~~~~~~~~~l~~~v~~~~~ev~~~k~g~g~~~ 244 (369)
||+++++++++|+++||||||+ +++|+||++++.+ .+++++++++.+++++++++|++. ||+|+
T Consensus 153 la~~~~v~~~~v~~~viGeHg~-~~~~~~S~~~v~g~~~~~~~~~~~~~~~~~~~~~l~~~v~~~g~~ii~~---kg~t~ 228 (308)
T cd05292 153 LGEHLGVDPRSVHAYIIGEHGD-SEVAVWSSANIGGVPLDEFCKLCGRPFDEEVREEIFEEVRNAAYEIIER---KGATY 228 (308)
T ss_pred HHHHhCCCccceeceeeccCCC-cEEecceeeeECCEEHHHHhhhcccccCHHHHHHHHHHHHHHHHHHHHc---CCccH
Confidence 9999999999999999999998 9999999998642 234456889999999999999995 58999
Q ss_pred hHHHHHHHHHHHHHHhccCCCCceeEEE-eecCCC-CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 017551 245 LSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQDW 322 (369)
Q Consensus 245 ~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i~~~ 322 (369)
|++|+++++++++|+++.+ .+++++ +++|+| .+++|||+||+||++|+++++++ +|+++|+++|+++++.|+..
T Consensus 229 ~~~a~a~~~i~~ail~~~~---~v~~~s~~~~g~yg~~~~~~s~P~~ig~~Gv~~i~~~-~L~~~E~~~l~~s~~~i~~~ 304 (308)
T cd05292 229 YAIGLALARIVEAILRDEN---SVLTVSSLLDGQYGIKDVALSLPCIVGRSGVERVLPP-PLSEEEEEALRASAEVLKEA 304 (308)
T ss_pred HHHHHHHHHHHHHHHcCCC---cEEEEEEEEcccCCCCCEEEEEEEEEeCCceEEecCC-CCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999754 488886 789999 57899999999999999999995 99999999999999666554
Q ss_pred H
Q 017551 323 L 323 (369)
Q Consensus 323 l 323 (369)
+
T Consensus 305 ~ 305 (308)
T cd05292 305 I 305 (308)
T ss_pred H
Confidence 4
No 26
>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent. This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography
Probab=100.00 E-value=6.3e-56 Score=431.70 Aligned_cols=292 Identities=23% Similarity=0.305 Sum_probs=249.8
Q ss_pred EEEEEcCCCccHHHHHHHHHhCCCCc-----EEEEEeCCC----chhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEE
Q 017551 22 KVAILGAAGGIGQPLAMLMKINPLVS-----VLHLYDVVN----TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLV 92 (369)
Q Consensus 22 KI~IiGA~G~vGs~la~~l~~~~~~~-----el~L~D~~~----~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiV 92 (369)
||+||||+|.||+++++.|.++++++ +|+|+|+++ ++++++||.|...... .....+++.+++++|||+|
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~~a~g~~~Dl~d~~~~~~-~~~~~~~~~~~~~~~aDiV 79 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMKVLEGVVMELMDCAFPLL-DGVVPTHDPAVAFTDVDVA 79 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcccccceeEeehhcccchhc-CceeccCChHHHhCCCCEE
Confidence 69999999999999999999988875 799999954 5789999999873211 1112233546899999999
Q ss_pred EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe-chhcH
Q 017551 93 IIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDV 170 (369)
Q Consensus 93 ii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~-t~Ld~ 170 (369)
|++||.|+++|++|.+++..|++++++++++|.+++ |++++|++|||+|++|+++ ++.++++|+|+||+ |.||+
T Consensus 80 VitAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvsNPvDv~t~v~----~~~sg~~~~~vig~gt~LDs 155 (324)
T TIGR01758 80 ILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVGNPANTNALVL----SNYAPSIPPKNFSALTRLDH 155 (324)
T ss_pred EEcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCcHHHHHHHH----HHHcCCCCcceEEEeeehHH
Confidence 999999999999999999999999999999999996 9999999999999999776 67777788889999 89999
Q ss_pred HHHHHHHHHHhCCCCCCCc-eeEEeecCCCccccccccCCCC-C----C----CCHHH--HHHHHhhhccchhhhhhhhc
Q 017551 171 VRANTFVAEVLGLDPRDVD-VPVVGGHAGVTILPLLSQVKPP-C----S----FTQEE--TEYLTNRIQNGGTEVVEAKA 238 (369)
Q Consensus 171 ~R~~~~la~~lgv~~~~V~-~~viG~hg~~~~vp~~S~~~~~-~----~----~~~~~--~~~l~~~v~~~~~ev~~~k~ 238 (369)
+|||++||+++|++|++|+ ++||||||+ +++|+||++++. + + +++++ ++++.+++++++++|++.|
T Consensus 156 ~R~r~~la~~l~v~~~~V~~~~V~GeHG~-s~v~~~S~~~v~~g~~~~pl~~~~~~~~~~~~~i~~~v~~~g~~Ii~~k- 233 (324)
T TIGR01758 156 NRALAQVAERAGVPVSDVKNVIIWGNHSS-TQYPDVNHATVTKGGKQKPVREAIKDDAYLDGEFITTVQQRGAAIIRAR- 233 (324)
T ss_pred HHHHHHHHHHhCCChhhceEeEEEECCCC-CcccccccceecCCCCccCHHHHhcchhhHHHHHHHHHHhCHHHHHhcc-
Confidence 9999999999999999996 699999999 999999999886 4 1 22222 5789999999999999964
Q ss_pred cCCchhhHHHHHHHHHHHHHHhccCCCCceeEEE-eecCC-C--CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHH
Q 017551 239 GAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQ-V--TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCL 314 (369)
Q Consensus 239 g~g~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~-~--~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~ 314 (369)
+|++.|++|.++++++++|+++.+ ++.+++++ +++|+ | ++++|||+||++|++|++.+.++ +|+++|+++|++
T Consensus 234 -~~~t~~~ia~~~~~i~~ai~~~~~-~~~i~~vs~~~~g~~yg~~~~v~~s~P~~ig~g~~~~i~el-~L~~~E~~~l~~ 310 (324)
T TIGR01758 234 -KLSSALSAAKAAVDQMHDWVLGTP-EGTFVSMGVYSDGSPYGVPKGLIFSFPVTCKNGEWKIVEGL-CVDDSSRKKLAL 310 (324)
T ss_pred -CCCHHHHHHHHHHHHHHHHhcCCC-CCeEEEEEeecCCcccCCCCceEEEEEEEEcCCeEEEecCC-CCCHHHHHHHHH
Confidence 358999999999999999995543 33588887 78999 8 48999999999997777776665 999999999999
Q ss_pred HHHHHHHHH
Q 017551 315 LHLCFQDWL 323 (369)
Q Consensus 315 ~~~~i~~~l 323 (369)
++..+++..
T Consensus 311 s~~~lk~~~ 319 (324)
T TIGR01758 311 TAKELEEER 319 (324)
T ss_pred HHHHHHHHH
Confidence 996555444
No 27
>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=2e-55 Score=428.70 Aligned_cols=292 Identities=23% Similarity=0.297 Sum_probs=253.3
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCc-----EEEEEeCCC----chhHHHHhhcccC--CCeEEEEeCCCChhhhcC
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVS-----VLHLYDVVN----TPGVTADISHMDT--GAVVRGFLGQPQLENALT 87 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~-----el~L~D~~~----~~g~~~dL~~~~~--~~~v~~~~~t~dl~~al~ 87 (369)
++.||+||||+|++|+++++.|..+++++ +|+|+|++. +.++++|+.|+.. ..++.. +++++++++
T Consensus 1 ~~~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~~~~~~~~~~---~~~~~~~l~ 77 (325)
T cd01336 1 EPIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAFPLLKSVVA---TTDPEEAFK 77 (325)
T ss_pred CCeEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhccccccCCcee---cCCHHHHhC
Confidence 46799999999999999999999988764 999999954 5788899999762 223332 357779999
Q ss_pred CCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCChhHHHHHHHHHh-CCCCCCcEEEe
Q 017551 88 GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKA-GTYDPKKLLGV 165 (369)
Q Consensus 88 ~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~i~ae~~~~~-~~~~~~kviG~ 165 (369)
|||+||++||.|+++|++|.+++..|+++++++++.|.+++ |+++++++|||+|++|+++ ++. +++|+++ ||.
T Consensus 78 ~aDiVI~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~----~k~~~~~~~~~-ig~ 152 (325)
T cd01336 78 DVDVAILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGNPANTNALIL----LKYAPSIPKEN-FTA 152 (325)
T ss_pred CCCEEEEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecCcHHHHHHHH----HHHcCCCCHHH-EEe
Confidence 99999999999999999999999999999999999999997 7999999999999999876 566 5787777 777
Q ss_pred -chhcHHHHHHHHHHHhCCCCCCCc-eeEEeecCCCccccccccCCCC----CC-----CCHHH--HHHHHhhhccchhh
Q 017551 166 -TMLDVVRANTFVAEVLGLDPRDVD-VPVVGGHAGVTILPLLSQVKPP----CS-----FTQEE--TEYLTNRIQNGGTE 232 (369)
Q Consensus 166 -t~Ld~~R~~~~la~~lgv~~~~V~-~~viG~hg~~~~vp~~S~~~~~----~~-----~~~~~--~~~l~~~v~~~~~e 232 (369)
|.||+.||++++|++++++|++|+ .+||||||+ +++|+||++++. +. +++++ ++++.+++++++++
T Consensus 153 gt~LDs~R~r~~la~~l~v~~~~v~~~~V~GeHG~-s~~~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~i~~~v~~~g~~ 231 (325)
T cd01336 153 LTRLDHNRAKSQIALKLGVPVSDVKNVIIWGNHSS-TQYPDVNHATVELNGKGKPAREAVKDDAWLNGEFISTVQKRGAA 231 (325)
T ss_pred eehHHHHHHHHHHHHHhCcChhhceEeEEEEcCCC-CeeeccccceeecCCCCccHHHHhcccchhHHHHHHHHHhhHHH
Confidence 899999999999999999999996 569999999 999999999886 31 22222 58899999999999
Q ss_pred hhhhhccCCchhhHHHHHHHHHHHHHHhccCCCCceeEEE-eecCCC--CCccEEEEEEEEcCCCeEEEccCCCCCHHHH
Q 017551 233 VVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYES 309 (369)
Q Consensus 233 v~~~k~g~g~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~--~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~ 309 (369)
|++.+ +|++.|++|.++++++++|++|.+ ++.+++++ +++|+| ++++|||+||++|++|+++++++ +|+++|+
T Consensus 232 Ii~~~--~g~t~~~~a~~~~~i~~ail~~~~-~~~v~~vs~~~~g~yg~~~~v~~s~P~~ig~~Gv~~i~~~-~L~~~E~ 307 (325)
T cd01336 232 VIKAR--KLSSAMSAAKAICDHVHDWWFGTP-EGEFVSMGVYSDGSYGVPEGLIFSFPVTCKNGKWKIVQGL-SIDDFSR 307 (325)
T ss_pred HHHcc--ccchHHHHHHHHHHHHHHHHcCCC-CCeEEEEEEecCCCcCCCCceEEEEEEEEeCCEEEEecCC-CCCHHHH
Confidence 99963 579999999999999999999853 23488886 789999 58999999999999999999996 9999999
Q ss_pred HHHHHHHHHHHHHH
Q 017551 310 GLFCLLHLCFQDWL 323 (369)
Q Consensus 310 ~~L~~~~~~i~~~l 323 (369)
++|+++++.+++..
T Consensus 308 ~~l~~s~~~l~~e~ 321 (325)
T cd01336 308 EKIDATAKELVEEK 321 (325)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999996555444
No 28
>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins. Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas
Probab=100.00 E-value=1.6e-54 Score=418.61 Aligned_cols=285 Identities=34% Similarity=0.556 Sum_probs=253.5
Q ss_pred EEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccC--CCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551 23 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT--GAVVRGFLGQPQLENALTGMDLVIIPAGV 98 (369)
Q Consensus 23 I~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~--~~~v~~~~~t~dl~~al~~ADiVii~ag~ 98 (369)
|+|||| |.||+++++.++++++. +|+|+|+++ +.+.++|+.|... ....+... ++|+ ++++|||+||+++|.
T Consensus 1 I~IIGa-G~vG~~ia~~la~~~l~-eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~I~~-t~d~-~~l~dADiVIit~g~ 76 (300)
T cd01339 1 ISIIGA-GNVGATLAQLLALKELG-DVVLLDIVEGLPQGKALDISQAAPILGSDTKVTG-TNDY-EDIAGSDVVVITAGI 76 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhCCCc-EEEEEeCCCcHHHHHHHHHHHhhhhcCCCeEEEE-cCCH-HHhCCCCEEEEecCC
Confidence 689999 99999999999999877 999999988 5778888888642 12233322 4565 679999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEec-hhcHHHHHHHH
Q 017551 99 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT-MLDVVRANTFV 177 (369)
Q Consensus 99 p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~t-~Ld~~R~~~~l 177 (369)
|+++|++|.+++.+|++++++++++|+++||+++++++|||+|++++++ ++++++||+|+||+| .||+.|++++|
T Consensus 77 p~~~~~~r~e~~~~n~~i~~~i~~~i~~~~p~~~iIv~sNP~di~t~~~----~~~s~~~~~rviGlgt~lds~r~~~~l 152 (300)
T cd01339 77 PRKPGMSRDDLLGTNAKIVKEVAENIKKYAPNAIVIVVTNPLDVMTYVA----YKASGFPRNRVIGMAGVLDSARFRYFI 152 (300)
T ss_pred CCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHH----HHHhCCCHHHEEEecchHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999998765 678899999999995 79999999999
Q ss_pred HHHhCCCCCCCceeEEeecCCCccccccccCCCCC-C----CCHHHHHHHHhhhccchhhhhhhhccCCchhhHHHHHHH
Q 017551 178 AEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-S----FTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAV 252 (369)
Q Consensus 178 a~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~-~----~~~~~~~~l~~~v~~~~~ev~~~k~g~g~~~~s~A~a~~ 252 (369)
|++|++++++|+++|+|+||+ +++|+||++++.+ + +++++++++.+++++++++|++.| |+|+++|++|.+++
T Consensus 153 a~~l~v~~~~v~~~v~G~hg~-~~~~~~s~~~v~g~~~~~~~~~~~~~~~~~~v~~~~~~ii~~k-~~g~t~~~~a~~~~ 230 (300)
T cd01339 153 AEELGVSVKDVQAMVLGGHGD-TMVPLPRYSTVGGIPLTELITKEEIDEIVERTRNGGAEIVNLL-KTGSAYYAPAAAIA 230 (300)
T ss_pred HHHhCCCccceEEEEEeCCCC-cceecceecEECCEEHHHhcChHHHHHHHHHHHHHHHHHHhhc-CCCchhHHHHHHHH
Confidence 999999999999999999998 9999999998853 1 345568899999999999999987 78999999999999
Q ss_pred HHHHHHHhccCCCCceeEEE-eecCCC-CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHHHH
Q 017551 253 KFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQD 321 (369)
Q Consensus 253 ~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i~~ 321 (369)
+++++|+++.+ .+++++ +++|+| .+++|||+||++|++|+++++++ +|+++|+++|+++++.|++
T Consensus 231 ~i~~ail~~~~---~i~~~s~~~~g~yg~~~~~~s~P~~ig~~G~~~~~~l-~l~~~E~~~l~~s~~~l~~ 297 (300)
T cd01339 231 EMVEAILKDKK---RVLPCSAYLEGEYGIKDIFVGVPVVLGKNGVEKIIEL-DLTDEEKEAFDKSVESVKE 297 (300)
T ss_pred HHHHHHHcCCC---cEEEEEEEeccccCCCCeEEEEEEEEeCCeEEEEeCC-CCCHHHHHHHHHHHHHHHH
Confidence 99999999764 488887 789999 56999999999999999999996 9999999999999965543
No 29
>PRK06223 malate dehydrogenase; Reviewed
Probab=100.00 E-value=4.8e-54 Score=416.33 Aligned_cols=291 Identities=31% Similarity=0.547 Sum_probs=256.7
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCC--CeEEEEeCCCChhhhcCCCcEEEEc
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG--AVVRGFLGQPQLENALTGMDLVIIP 95 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~--~~v~~~~~t~dl~~al~~ADiVii~ 95 (369)
++||+|||| |.+|+++++.++..++. +|+|+|+++ +++.++|+.|.... ...+.. .++|+ ++++|||+||++
T Consensus 2 ~~KI~VIGa-G~vG~~ia~~la~~~~~-ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~-~~~d~-~~~~~aDiVii~ 77 (307)
T PRK06223 2 RKKISIIGA-GNVGATLAHLLALKELG-DVVLFDIVEGVPQGKALDIAEAAPVEGFDTKIT-GTNDY-EDIAGSDVVVIT 77 (307)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCe-EEEEEECCCchhHHHHHHHHhhhhhcCCCcEEE-eCCCH-HHHCCCCEEEEC
Confidence 369999999 99999999999999877 999999987 67888898886421 122332 25676 679999999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe-chhcHHHHH
Q 017551 96 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRAN 174 (369)
Q Consensus 96 ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~-t~Ld~~R~~ 174 (369)
+|.|+++|++|.+++.+|++++++++++|++++|++|+|++|||+|++|+++ ++++++|++||||+ |.||+.|++
T Consensus 78 ~~~p~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~viv~tNP~d~~~~~~----~~~s~~~~~~viG~gt~lds~r~~ 153 (307)
T PRK06223 78 AGVPRKPGMSRDDLLGINAKIMKDVAEGIKKYAPDAIVIVVTNPVDAMTYVA----LKESGFPKNRVIGMAGVLDSARFR 153 (307)
T ss_pred CCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHH----HHHhCCCcccEEEeCCCcHHHHHH
Confidence 9999999999999999999999999999999999999999999999999765 67889999999999 579999999
Q ss_pred HHHHHHhCCCCCCCceeEEeecCCCccccccccCCCCC-C----CCHHHHHHHHhhhccchhhhhhhhccCCchhhHHHH
Q 017551 175 TFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-S----FTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAY 249 (369)
Q Consensus 175 ~~la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~-~----~~~~~~~~l~~~v~~~~~ev~~~k~g~g~~~~s~A~ 249 (369)
++||++++++|++|+++|+|+||+ +++|+||++++.+ + ++++.++++.+++++++++|++.. ++|++.|++|.
T Consensus 154 ~~la~~l~v~~~~v~~~viGehg~-s~~p~~S~~~v~g~~~~~~~~~~~~~~l~~~v~~~~~~ii~~~-~kg~t~~~~A~ 231 (307)
T PRK06223 154 TFIAEELNVSVKDVTAFVLGGHGD-SMVPLVRYSTVGGIPLEDLLSKEKLDEIVERTRKGGAEIVGLL-KTGSAYYAPAA 231 (307)
T ss_pred HHHHHHhCcChhhCcccEEcCCCC-cceEchhhCEECCEEHHHhCChHHHHHHHHHHHHHHHHHHhhc-ccCChhHHHHH
Confidence 999999999999999999999998 9999999998743 1 445557899999999999999964 57899999999
Q ss_pred HHHHHHHHHHhccCCCCceeEEE-eecCCC-CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHHHHHHH
Q 017551 250 AAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQDWLG 324 (369)
Q Consensus 250 a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i~~~l~ 324 (369)
++++++++++.|.+ .+++++ +++|+| .++++||+||++|++|+++++++ +|+++|+++|++++..+++.++
T Consensus 232 ~~~~ii~ail~~~~---~~~~~~v~~~g~yg~~~~~~s~P~~i~~~Gv~~i~~~-~l~~~e~~~l~~s~~~l~~~~~ 304 (307)
T PRK06223 232 SIAEMVEAILKDKK---RVLPCSAYLEGEYGVKDVYVGVPVKLGKNGVEKIIEL-ELDDEEKAAFDKSVEAVKKLIE 304 (307)
T ss_pred HHHHHHHHHHcCCC---cEEEEEEEecCcCCCCCeEEEeEEEEeCCeEEEEeCC-CCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999998754 477775 789988 68999999999999999999995 9999999999999966665554
No 30
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=100.00 E-value=3.2e-54 Score=417.91 Aligned_cols=290 Identities=25% Similarity=0.424 Sum_probs=255.5
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC----chhHHHHhhcccC--CCeEEEEeCCCChhhhcCCCcEEEE
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN----TPGVTADISHMDT--GAVVRGFLGQPQLENALTGMDLVII 94 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~----~~g~~~dL~~~~~--~~~v~~~~~t~dl~~al~~ADiVii 94 (369)
|||+|+||+|.+|+++++.++..++..+|+|+|+++ +++.++|+.|... ....+.. .++|+ +++++||+||+
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i~-~~~d~-~~l~~aDiVii 78 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIK-ISSDL-SDVAGSDIVII 78 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCcEEE-ECCCH-HHhCCCCEEEE
Confidence 699999998999999999999999988999999954 5788999998642 1222332 24565 67999999999
Q ss_pred cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe-chhcHHHH
Q 017551 95 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRA 173 (369)
Q Consensus 95 ~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~-t~Ld~~R~ 173 (369)
++|.|+++|++|.+++..|+++++++++.|.+++|++++++++||+|++|+++ ++.+++|++|+||+ |.||++|+
T Consensus 79 tag~p~~~~~~r~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~npvd~~t~~~----~~~~g~~~~~viG~gt~LDs~R~ 154 (309)
T cd05294 79 TAGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEFAPDTKILVVTNPVDVMTYKA----LKESGFDKNRVFGLGTHLDSLRF 154 (309)
T ss_pred ecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHH----HHhcCCCHHHEeeccchHHHHHH
Confidence 99999999999999999999999999999999999999999999999999765 67888999999999 68999999
Q ss_pred HHHHHHHhCCCCCCCceeEEeecCCCccccccccCCCCCC-------CCHHHHHHHHhhhccchhhhhhhhccCCchhhH
Q 017551 174 NTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCS-------FTQEETEYLTNRIQNGGTEVVEAKAGAGSATLS 246 (369)
Q Consensus 174 ~~~la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~~-------~~~~~~~~l~~~v~~~~~ev~~~k~g~g~~~~s 246 (369)
+++||+++++++++|+++|+||||+ +++|+||++++.+. ..+.+++++.++++++|++|++. +|++.||
T Consensus 155 ~~~la~~l~v~~~~v~~~viGeHg~-s~~~~~S~~~i~g~~~~~~~~~~~~~~~~i~~~v~~~g~~i~~~---kg~t~~~ 230 (309)
T cd05294 155 KVAIAKHFNVHISEVHTRIIGEHGD-SMVPLISSTSIGGIPIKRFPEYKDFDVEKIVETVKNAGQNIISL---KGGSEYG 230 (309)
T ss_pred HHHHHHHHCcChHHeEEEEEecCCC-ceEeeeeecEECCEEHHHhhcccHHHHHHHHHHHHHHHHHHHHh---cCCchhh
Confidence 9999999999999999999999999 99999999987531 22445789999999999999995 4778999
Q ss_pred HHHHHHHHHHHHHhccCCCCceeEEE-eecCCC--CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 017551 247 MAYAAVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQDWL 323 (369)
Q Consensus 247 ~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~--~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i~~~l 323 (369)
+|.++++++++|++|.+ .+++++ +++|+| .+++++|+||++|++|+++++++ +|+++|+++|++++..|++.+
T Consensus 231 ~a~~~~~ii~ail~~~~---~v~~vsv~~~g~~~~~~~~~~svP~~ig~~Gv~~i~~l-~l~~~E~~~l~~s~~~i~~~~ 306 (309)
T cd05294 231 PASAISNLVRTIANDER---RILTVSTYLEGEIDGIRDVCIGVPVKLGKNGIEEIVPI-EMDDDEREAFRKSAEIVKKYT 306 (309)
T ss_pred HHHHHHHHHHHHHCCCC---eEEEEEEEECCccCCCCCeEEEeEEEEcCCccEEEeCC-CCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999998876 377775 789987 34899999999999999999996 999999999999997666554
Q ss_pred H
Q 017551 324 G 324 (369)
Q Consensus 324 ~ 324 (369)
+
T Consensus 307 ~ 307 (309)
T cd05294 307 R 307 (309)
T ss_pred h
Confidence 3
No 31
>PLN00135 malate dehydrogenase
Probab=100.00 E-value=2.4e-53 Score=410.13 Aligned_cols=261 Identities=21% Similarity=0.309 Sum_probs=229.6
Q ss_pred EEEEEeCCC----chhHHHHhhcccC--CCeEEEEeCCCChhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHH
Q 017551 48 VLHLYDVVN----TPGVTADISHMDT--GAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLC 121 (369)
Q Consensus 48 el~L~D~~~----~~g~~~dL~~~~~--~~~v~~~~~t~dl~~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~ 121 (369)
.|+|+|+++ ++|+++||.|+.. ...+.. +++.+++++|||+||++||.||+|||+|.+++..|++++++++
T Consensus 15 ~l~L~D~~~~~~~a~g~~~Dl~da~~~~~~~i~~---~~~~y~~~~daDiVVitAG~~~k~g~sR~dll~~N~~I~~~i~ 91 (309)
T PLN00135 15 ILHMLDIPPAAEALNGVKMELIDAAFPLLKGVVA---TTDVVEACKGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKSQA 91 (309)
T ss_pred EEEEecCcccccchhhHHHHHHhhhHHhcCCcEe---cCCHHHHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHH
Confidence 899999976 6899999999872 123332 3454689999999999999999999999999999999999999
Q ss_pred HHHhhh-CCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe-chhcHHHHHHHHHHHhCCCCCCC-ceeEEeecCC
Q 017551 122 EGIAKC-CPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDV-DVPVVGGHAG 198 (369)
Q Consensus 122 ~~i~~~-~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~-t~Ld~~R~~~~la~~lgv~~~~V-~~~viG~hg~ 198 (369)
++|.++ +|+++++++|||+|++|+++ ++.+++|++|+||. |.||++|||++||+++|+++++| +++||||||+
T Consensus 92 ~~i~~~~~p~aivivvsNPvDv~t~~~----~~~sg~~~~~vig~gt~LDsaR~r~~la~~l~v~~~~V~~~~VlGeHG~ 167 (309)
T PLN00135 92 SALEKHAAPDCKVLVVANPANTNALIL----KEFAPSIPEKNITCLTRLDHNRALGQISERLGVPVSDVKNVIIWGNHSS 167 (309)
T ss_pred HHHHHhcCCCeEEEEeCCcHHHHHHHH----HHHcCCCCccEEEeeehHHHHHHHHHHHHHhCcChhhceeeEEEEcCCC
Confidence 999996 89999999999999999766 67889999999999 89999999999999999999999 7999999999
Q ss_pred CccccccccCCC----CCC-----CCHHH--HHHHHhhhccchhhhhhhhccCCchhhHHHHHHHHHHHHHHhccCCCCc
Q 017551 199 VTILPLLSQVKP----PCS-----FTQEE--TEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAG 267 (369)
Q Consensus 199 ~~~vp~~S~~~~----~~~-----~~~~~--~~~l~~~v~~~~~ev~~~k~g~g~~~~s~A~a~~~li~ai~~~~~~~~~ 267 (369)
+++|+||++++ .+. +.+++ .+++.+++++++++|++.+ +|+|+||+|.++++++++|+++++ ++.
T Consensus 168 -s~v~~~S~a~v~~~~~g~p~~e~~~~~~~~~~~i~~~v~~~g~~Ii~~~--kg~t~~~ia~a~~~iv~ai~~~~~-~~~ 243 (309)
T PLN00135 168 -TQYPDVNHATVKTPSGEKPVRELVADDAWLNGEFITTVQQRGAAIIKAR--KLSSALSAASSACDHIRDWVLGTP-EGT 243 (309)
T ss_pred -ceeeccccceEecCCCCcCHHHHhCchhhHHHHHHHHHHHHHHHHHHcc--CccHHHHHHHHHHHHHHHHHhCCc-CCe
Confidence 99999999988 431 23333 5789999999999999963 589999999999999999999642 234
Q ss_pred eeEEE-eecCCC--CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHHH
Q 017551 268 VVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQ 320 (369)
Q Consensus 268 v~~~~-~~~g~~--~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i~ 320 (369)
+++++ +++|+| ++++|||+||++|++|++.++++ +|+++|+++|++++..++
T Consensus 244 v~~vsv~~~g~YGi~~~v~~s~P~vlg~~gve~v~~l-~L~~~E~~~l~~S~~~lk 298 (309)
T PLN00135 244 WVSMGVYSDGSYGVPPGLIYSFPVTCEKGEWSIVQGL-SIDEFSRKKMDATAKELK 298 (309)
T ss_pred EEEEEEEecCccCCcCCeEEEEEEEEECCEEEEecCC-CCCHHHHHHHHHHHHHHH
Confidence 88886 789999 48999999999999999999896 999999999999995444
No 32
>cd05295 MDH_like Malate dehydrogenase-like. These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=100.00 E-value=1.4e-53 Score=426.81 Aligned_cols=285 Identities=15% Similarity=0.117 Sum_probs=245.9
Q ss_pred CCCCCEEEEEcCCCccHHHHHHHHHhCCCC-----cEEEEEeCC--C--chhHHHHhhcccC--CCeEEEEeCCCChhhh
Q 017551 17 GAAGFKVAILGAAGGIGQPLAMLMKINPLV-----SVLHLYDVV--N--TPGVTADISHMDT--GAVVRGFLGQPQLENA 85 (369)
Q Consensus 17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~-----~el~L~D~~--~--~~g~~~dL~~~~~--~~~v~~~~~t~dl~~a 85 (369)
.+++.+|+|+||+|.+|+++.+.++....+ -.|+|+|+. . ++|+++||.|+.+ ...+... +++ +++
T Consensus 120 ~~~p~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~--~~~-~ea 196 (452)
T cd05295 120 KINPLQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVT--TDL-DVA 196 (452)
T ss_pred CCCceEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEE--ECC-HHH
Confidence 456789999999999999999999985432 279999994 3 7899999999873 1234443 234 689
Q ss_pred cCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCC--CeEEEEecCCCCChhHHHHHHHHHhC-CCCCCcE
Q 017551 86 LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP--NATVNLISNPVNSTVPIAAEVFKKAG-TYDPKKL 162 (369)
Q Consensus 86 l~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p--~a~viv~tNPv~~~t~i~ae~~~~~~-~~~~~kv 162 (369)
++|||+||+++|.||+|||+|.|++..|++++++++++|.+++| +++++++|||+|++|+++ ++.+ ++|++||
T Consensus 197 ~~daDvvIitag~prk~G~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~tNPvD~~t~i~----~k~apgiP~~rV 272 (452)
T cd05295 197 FKDAHVIVLLDDFLIKEGEDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGRTFLNLKTSIL----IKYAPSIPRKNI 272 (452)
T ss_pred hCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHH----HHHcCCCCHHHE
Confidence 99999999999999999999999999999999999999999999 899999999999999876 4555 9999999
Q ss_pred EEechhcHHHHHHHHHHHhCCCCCCC-ceeEEeecCCCccccccccCCCCC------------C-----CCHHH--HHHH
Q 017551 163 LGVTMLDVVRANTFVAEVLGLDPRDV-DVPVVGGHAGVTILPLLSQVKPPC------------S-----FTQEE--TEYL 222 (369)
Q Consensus 163 iG~t~Ld~~R~~~~la~~lgv~~~~V-~~~viG~hg~~~~vp~~S~~~~~~------------~-----~~~~~--~~~l 222 (369)
||+++||++|++++||+++|+++++| +++||||||+ +++|+||++++.+ . +.+++ .+++
T Consensus 273 ig~gtlds~R~r~~LA~kl~V~~~~V~~~~VwGeHG~-sqvpd~S~a~V~G~~~a~~~p~~~~~pl~e~i~d~~w~~~~~ 351 (452)
T cd05295 273 IAVARLQENRAKALLARKLNVNSAGIKDVIVWGNIGG-NTYIDLSKARVYRYDSAIWGPPNYSRPVLELVHDSKWINGEF 351 (452)
T ss_pred EEecchHHHHHHHHHHHHhCcCHHHceeeEEEEccCC-ceeeeeeEEEEcccccccccccccCccHHHHhcchhhhHHHH
Confidence 99987889999999999999999999 6799999999 9999999998743 1 22333 2567
Q ss_pred HhhhccchhhhhhhhccCCchhhHHHHHHHHHHHHHHhccCCCCceeEEE-eecCCC--CCccEEEEEEEEcCCCeEEEc
Q 017551 223 TNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIF 299 (369)
Q Consensus 223 ~~~v~~~~~ev~~~k~g~g~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~--~~~~~~svPv~lg~~Gv~~~~ 299 (369)
.+.+++++. + ++|++.||+|.|+++++++|++|++.. .+++++ +++|+| |++++||+||++|++|++.+.
T Consensus 352 ~~~v~~rg~---~---rkgsT~~siA~A~~~iv~ail~~t~~~-~ilsvsv~sdG~YGip~gv~~S~Pviig~~Gve~V~ 424 (452)
T cd05295 352 VATLKSLSS---S---LNHEAAISPAHAIATTLSYWYHGSPPG-EIFSLGVISEGWYGIPEGIVFSMPVKFQNGSWEVVT 424 (452)
T ss_pred HHHHHHHHH---h---ccCChHHHHHHHHHHHHHHHHhCCCCC-eEEEEEEeeccccCCcCCEEEEEEEEEeCCeEEEEe
Confidence 777888777 2 578999999999999999999998532 377786 789999 689999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHH
Q 017551 300 QLGPLNEYESGLFCLLHL 317 (369)
Q Consensus 300 ~~~~L~~~E~~~L~~~~~ 317 (369)
++ +|+++|+++|++++.
T Consensus 425 ~L-~L~e~E~~kL~~S~~ 441 (452)
T cd05295 425 DL-ELSEILREVLKRITS 441 (452)
T ss_pred CC-CCCHHHHHHHHHHHH
Confidence 96 999999999998883
No 33
>TIGR01756 LDH_protist lactate dehydrogenase. This model represents a family of protist lactate dehydrogenases which have aparrently evolved from a recent protist malate dehydrogenase ancestor. Lactate dehydrogenase converts the hydroxyl at C-2 of lactate to a carbonyl in the product, pyruvate. The preference of this enzyme for NAD or NADP has not been determined. A critical residue in malate dehydrogenase, arginine-91 (T. vaginalis numbering) has been mutated to a leucine, eliminating the positive charge which complemeted the carboxylate in malate which is absent in lactate. Several other more subtle changes are proposed to make the active site smaller to accomadate the less bulky lactate molecule.
Probab=100.00 E-value=7.5e-52 Score=400.65 Aligned_cols=266 Identities=20% Similarity=0.244 Sum_probs=228.7
Q ss_pred EEEEEeCCC----chhHHHHhhcccC-CCeEEEEeCCCChhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q 017551 48 VLHLYDVVN----TPGVTADISHMDT-GAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCE 122 (369)
Q Consensus 48 el~L~D~~~----~~g~~~dL~~~~~-~~~v~~~~~t~dl~~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~ 122 (369)
.|+|+|+++ ++|+++||.|+.+ ..+.... ++|++++++|||+||++||.||+|||+|.+++..|+++++++++
T Consensus 17 ~l~L~D~~~~~~~a~g~a~Dl~d~~~~~~~~~i~--~~~~~~~~~daDiVVitaG~~~k~g~tR~dll~~N~~I~~~i~~ 94 (313)
T TIGR01756 17 CLHLLEIPPALNRLEALAMELEDCAFPNLAGTIV--TTKLEEAFKDIDCAFLVASVPLKPGEVRADLLTKNTPIFKATGE 94 (313)
T ss_pred EEEEecCCCccchhHhHHHHHHHhccccCCceEe--cCCHHHHhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHH
Confidence 899999977 6899999999872 1222222 45777899999999999999999999999999999999999999
Q ss_pred HHhhhCCC-eEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe-chhcHHHHHHHHHHHhCCCCCCCce-eEEeecCCC
Q 017551 123 GIAKCCPN-ATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDV-PVVGGHAGV 199 (369)
Q Consensus 123 ~i~~~~p~-a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~-t~Ld~~R~~~~la~~lgv~~~~V~~-~viG~hg~~ 199 (369)
+|.+++|+ +++|++|||+|++|+++. ++.+++|++ +||+ |.||++||+++||+++|++|++|+. +||||||+
T Consensus 95 ~i~~~a~~~~ivivvtNPvDv~t~v~~---~~~sg~p~~-vig~gt~LDsaR~r~~la~~l~v~~~~V~~~~V~GeHG~- 169 (313)
T TIGR01756 95 ALSEYAKPTVKVLVIGNPVNTNCLVAM---LHAPKLSAE-NFSSLCMLDHNRAVSRIASKLKVPVDHIYHVVVWGNHAE- 169 (313)
T ss_pred HHHhhCCCCeEEEEeCCchHHHHHHHH---HHcCCCCHH-HEEecccHHHHHHHHHHHHHhCcChhheeeeEEEECCCC-
Confidence 99999955 889999999999997652 588999998 9999 8999999999999999999999965 59999999
Q ss_pred ccccccccCCC--CC-C------CCHH-HHHHHHhhhccchhhhhhhhccCCchhhHHH-HHHHHHHHHHHhccCCCCce
Q 017551 200 TILPLLSQVKP--PC-S------FTQE-ETEYLTNRIQNGGTEVVEAKAGAGSATLSMA-YAAVKFADACLRGLRGDAGV 268 (369)
Q Consensus 200 ~~vp~~S~~~~--~~-~------~~~~-~~~~l~~~v~~~~~ev~~~k~g~g~~~~s~A-~a~~~li~ai~~~~~~~~~v 268 (369)
+++|+||++++ .+ + ++++ .++++.+++++++++|++. ||+|+|++| .++++++++|++|++. +.+
T Consensus 170 s~vp~~S~~~V~~~G~~~~~~~~~~~~~~~~~i~~~v~~~g~~Ii~~---kg~t~~~~~a~ai~~iv~ail~~~~~-~~i 245 (313)
T TIGR01756 170 SMVADLTHAEFTKNGKHQKVFDELCRDYPEPDFFEVIAQRAWKILEM---RGFTSAASPVKASLQHMKAWLFGTRP-GEV 245 (313)
T ss_pred ceeecccccEEecCCeehhHhhhcCcHhHHHHHHHHHHHHHHHHHhC---cCCcchHHHHHHHHHHHHHHhcCCCC-CeE
Confidence 99999999988 43 1 2221 3678999999999999994 589999977 6999999999997653 358
Q ss_pred eEEE-eec--CCC--CCccEEEEEEEEcCCCeEEEcc-CCCCCHHHHHHHHHHHHHHHHHHHh
Q 017551 269 VECA-FVA--SQV--TELPFFASKVRLGRQGAEEIFQ-LGPLNEYESGLFCLLHLCFQDWLGE 325 (369)
Q Consensus 269 ~~~~-~~~--g~~--~~~~~~svPv~lg~~Gv~~~~~-~~~L~~~E~~~L~~~~~~i~~~l~~ 325 (369)
++++ +++ |+| +++++||+||++|++|++++++ + +|+++|+++|++++..|+.+.+.
T Consensus 246 ~pvsv~l~~~g~YGi~~~v~~s~P~vig~~Gv~~ive~l-~L~~~E~~~l~~Sa~~l~~e~~~ 307 (313)
T TIGR01756 246 LSMGIPVPEGNPYGIKPGVIFSFPCTVDEDGKVHVVENF-ELNPWLKTKLAQTEKDLFEERET 307 (313)
T ss_pred EEEEEEecCCCccCCCCCEEEEEEEEEeCCceEEEcCCC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence 8887 575 388 4799999999999999999999 6 99999999999999766555433
No 34
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=100.00 E-value=9.8e-51 Score=385.30 Aligned_cols=251 Identities=28% Similarity=0.428 Sum_probs=226.1
Q ss_pred EEEEcCCCccHHHHHHHHHhCC--CCcEEEEEeCCC--chhHHHHhhcccCCC-eEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551 23 VAILGAAGGIGQPLAMLMKINP--LVSVLHLYDVVN--TPGVTADISHMDTGA-VVRGFLGQPQLENALTGMDLVIIPAG 97 (369)
Q Consensus 23 I~IiGA~G~vGs~la~~l~~~~--~~~el~L~D~~~--~~g~~~dL~~~~~~~-~v~~~~~t~dl~~al~~ADiVii~ag 97 (369)
|+||||+|.+|+++++.|++.+ ...+|+|||+++ +++.++||.|..... ..+... ++|++++++|||+||+++|
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~-~~d~~~~~~~aDiVv~t~~ 79 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSI-TDDPYEAFKDADVVIITAG 79 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEE-CCchHHHhCCCCEEEECCC
Confidence 6899998999999999999999 778999999987 688999999986432 334433 6788899999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEechhcHHHHHHHH
Q 017551 98 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFV 177 (369)
Q Consensus 98 ~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~t~Ld~~R~~~~l 177 (369)
.|+++|++|.+++.+|++++++++++|+++||++|++++|||+|++|+++ ++++++|++|+||+|++|+.|+++++
T Consensus 80 ~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~~i~~tNP~d~~t~~~----~~~sg~~~~kviG~~~ld~~r~~~~l 155 (263)
T cd00650 80 VGRKPGMGRLDLLKRNVPIVKEIGDNIEKYSPDAWIIVVSNPVDIITYLV----WRYSGLPKEKVIGLGTLDPIRFRRIL 155 (263)
T ss_pred CCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHH----HHHhCCCchhEEEeecchHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998765 77889999999999669999999999
Q ss_pred HHHhCCCCCCCceeEEeecCCCccccccccCCCCCCCCHHHHHHHHhhhccchhhhhhhhccCCchhhHHHHHHHHHHHH
Q 017551 178 AEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADA 257 (369)
Q Consensus 178 a~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~~~~~~~~~~~l~~~v~~~~~ev~~~k~g~g~~~~s~A~a~~~li~a 257 (369)
|+++|+++++|+++|||+||+ +++|+||+++ +|.++++++++
T Consensus 156 a~~l~v~~~~v~~~v~G~hg~-~~~~~~s~~~-------------------------------------~a~~~~~ii~a 197 (263)
T cd00650 156 AEKLGVDPDDVKVYILGEHGG-SQVPDWSTVR-------------------------------------IATSIADLIRS 197 (263)
T ss_pred HHHhCCCccceEEEEEEcCCC-ceEeccccch-------------------------------------HHHHHHHHHHH
Confidence 999999999999999999999 8999999765 67899999999
Q ss_pred HHhccCCCCceeEEE-eecCCC--CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHHHHH
Q 017551 258 CLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHLCFQ 320 (369)
Q Consensus 258 i~~~~~~~~~v~~~~-~~~g~~--~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~~i~ 320 (369)
|++|.+ .+++++ +++|+| +++++||+||++|++|+++++++ +|+++|+++|+++++.++
T Consensus 198 i~~~~~---~~~~v~v~~~g~ygi~~~~~~s~P~~i~~~Gi~~~~~~-~l~~~e~~~l~~s~~~~~ 259 (263)
T cd00650 198 LLNDEG---EILPVGVRNNGQIGIPDDVVVSVPCIVGKNGVEEPIEV-GLTDFELEKLQKSADTLK 259 (263)
T ss_pred HHcCCC---EEEEEEEEeCCccCCcCCEEEEEEEEEeCCceEEEecC-CCCHHHHHHHHHHHHHHH
Confidence 999854 477775 789998 58999999999999999998985 999999999999985444
No 35
>KOG1496 consensus Malate dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=2.2e-44 Score=326.31 Aligned_cols=292 Identities=24% Similarity=0.339 Sum_probs=258.6
Q ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCC-----CCcEEEEEeCCC----chhHHHHhhcccCCCeEEEEeCCCChhhhcCC
Q 017551 18 AAGFKVAILGAAGGIGQPLAMLMKINP-----LVSVLHLYDVVN----TPGVTADISHMDTGAVVRGFLGQPQLENALTG 88 (369)
Q Consensus 18 ~~~~KI~IiGA~G~vGs~la~~l~~~~-----~~~el~L~D~~~----~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ 88 (369)
+.+.+|.|.||+|.||+++.+.++... .-..|+|+|+.. +.|+.|+|+|+.+ +.++....++|..++|+|
T Consensus 2 ~epirVlVtGAAGqI~ysll~~ia~G~vfG~dQPiiL~lLdi~~~~~~LegV~mELqD~a~-PlL~~Vvattd~~~afkd 80 (332)
T KOG1496|consen 2 KEPIRVLVTGAAGQIGYSLLPMIARGIVFGKDQPIILHLLDIPPMMSVLEGVKMELQDCAL-PLLKGVVATTDEVEAFKD 80 (332)
T ss_pred CCceEEEeecccchhhHHHHHHHcCceeecCCCceEEEeeCCchHHHHHHHHHHHHHhhhh-hHHHhhhcccChhhhhcc
Confidence 467899999999999999999997631 123899999987 6899999999985 555544447888999999
Q ss_pred CcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEech
Q 017551 89 MDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTM 167 (369)
Q Consensus 89 ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~t~ 167 (369)
.|+.|+.+++||++||+|.|++..|..|++..+.++++|+ |+.+++++.||+|..+.++. +.++.+|.+++-.+|.
T Consensus 81 v~~ailvGa~PR~eGMERkDll~~NvkIfk~Qg~AL~k~A~~~~KVlVVgNPaNTNali~~---k~ApsIP~kNfs~lTR 157 (332)
T KOG1496|consen 81 VDVAILVGAMPRREGMERKDLLSANVKIFKSQGAALEKYAKPNVKVLVVGNPANTNALILK---KFAPSIPEKNFSALTR 157 (332)
T ss_pred CcEEEEeccccCcccchhhhHHhhcceeehhhhHHHHHhcCCCceEEEecCccccchhHHh---hhCCCCchhcchhhhh
Confidence 9999999999999999999999999999999999999998 89999999999999988775 6788999999999999
Q ss_pred hcHHHHHHHHHHHhCCCCCCC-ceeEEeecCCCccccccccCCCCCC---------CCHHHH--HHHHhhhccchhhhhh
Q 017551 168 LDVVRANTFVAEVLGLDPRDV-DVPVVGGHAGVTILPLLSQVKPPCS---------FTQEET--EYLTNRIQNGGTEVVE 235 (369)
Q Consensus 168 Ld~~R~~~~la~~lgv~~~~V-~~~viG~hg~~~~vp~~S~~~~~~~---------~~~~~~--~~l~~~v~~~~~ev~~ 235 (369)
||.+|+...||.++|++.++| ++.|||+|+. |++|+..++++... +.|..| .++.+.||+||.-|++
T Consensus 158 LDhNRA~~QlA~klgv~~~~VkNviIWGNHSs-TQyPD~~hA~V~~~~~~~~v~e~v~d~~wL~g~Fi~tVQkRGaavi~ 236 (332)
T KOG1496|consen 158 LDHNRALAQLALKLGVPVSDVKNVIIWGNHSS-TQYPDVNHATVNTNGGEKPVKEAVKDDAWLQGEFIETVQKRGAAVIK 236 (332)
T ss_pred hchhhHHHHHHHhhCCchhhcceeEEeccccc-ccCCCccceeeeccCCcccHHHHhccchhhccchhhHHHhcchHhhh
Confidence 999999999999999999999 6899999998 99999999988421 455566 5799999999999998
Q ss_pred hhccCCchhhHHHHHHHHHHHHHHhccCCCCceeEEEeecCCC--CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHH
Q 017551 236 AKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFC 313 (369)
Q Consensus 236 ~k~g~g~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~~~~g~~--~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~ 313 (369)
++ +-|+.+|.|.+++++++.|+.+++...++...++.+|.| |++..||+||++ ++|-|++++..+++++-++++.
T Consensus 237 ar--k~SSA~SaA~aacDhi~dw~~gTpeG~fvSmgV~sDGsYgip~gli~SfPv~~-k~g~wkiVqgl~iddf~r~km~ 313 (332)
T KOG1496|consen 237 AR--KLSSAMSAAKAACDHIRDWWFGTPEGTFVSMGVYSDGSYGIPDGLIFSFPVTI-KNGDWKIVQGLPIDDFSREKMD 313 (332)
T ss_pred hh--hhhhhhhHHHhHhhhhhheecCCCCccEEEEeeecCCCCCCCCCeEEEcceEe-cCCceEEEcCcchhHHHHHhhh
Confidence 64 568899999999999999999998776555556899999 899999999999 7899999987799999999999
Q ss_pred HHHH
Q 017551 314 LLHL 317 (369)
Q Consensus 314 ~~~~ 317 (369)
..++
T Consensus 314 ~t~~ 317 (332)
T KOG1496|consen 314 LTAK 317 (332)
T ss_pred hhHH
Confidence 8883
No 36
>cd05197 GH4_glycoside_hydrolases Glycoside Hydrases Family 4. Glycoside hydrolases cleave glycosidic bonds to release smaller sugars from oligo- or polysaccharides. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP-PTS). After translocation, these phospho-disaccharides may be hydrolyzed by GH4 glycoside hydrolases. Other organisms (such as archaea and Thermotoga maritima) lack the PEP-PTS system, but have several enzymes normally associated with the PEP-PTS operon. GH4 family members include 6-phospho-beta-glucosidases, 6-phospho-alpha-glucosidases, alpha-glucosidases/alpha-glucuronidases (only from Thermotoga), and alpha-galactosidases. They require two cofactors, NAD+ and a divalent metal (Mn2+, Ni2+, Mg2+), for activity. Some also require reducing conditions. GH4 glycoside hydrolases are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families in
Probab=100.00 E-value=5.6e-32 Score=272.03 Aligned_cols=274 Identities=21% Similarity=0.242 Sum_probs=191.3
Q ss_pred CEEEEEcCCCccHHHHHHH----HHhCC---CCcEEEEEeCCC-chhHHHHhhccc---CCCeEEEEeCCCChhhhcCCC
Q 017551 21 FKVAILGAAGGIGQPLAML----MKINP---LVSVLHLYDVVN-TPGVTADISHMD---TGAVVRGFLGQPQLENALTGM 89 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~----l~~~~---~~~el~L~D~~~-~~g~~~dL~~~~---~~~~v~~~~~t~dl~~al~~A 89 (369)
+||+|||| |+ ++++. |.+.+ ..+||+|+|+++ ....+..+.+.. ....+++.. |+|+++|++||
T Consensus 1 ~KI~iIGg-GS---~~tp~li~~l~~~~~~l~~~ei~L~Did~~Rl~~v~~l~~~~~~~~g~~~~v~~-ttD~~~Al~gA 75 (425)
T cd05197 1 VKIAIIGG-GS---SFTPELVSGLLKTPEELPISEVTLYDIDEERLDIILTIAKRYVEEVGADIKFEK-TMDLEDAIIDA 75 (425)
T ss_pred CEEEEECC-ch---HhHHHHHHHHHcChhhCCCCEEEEEcCCHHHHHHHHHHHHHHHHhhCCCeEEEE-eCCHHHHhCCC
Confidence 69999999 74 45543 33333 368999999998 222233332221 234566544 78999999999
Q ss_pred cEEEEcC---C---------CCCCCCC---C-----HHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHH
Q 017551 90 DLVIIPA---G---------VPRKPGM---T-----RDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAE 149 (369)
Q Consensus 90 DiVii~a---g---------~p~k~g~---~-----r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae 149 (369)
||||.+. | +|.|+|. + ......+|+++++++++.|+++||+||+|++|||++++|+++
T Consensus 76 DfVi~~irvGg~~~r~~De~Iplk~G~~gqeT~G~GG~~~alrni~ii~~i~~~i~~~~P~a~lin~TNP~di~t~a~-- 153 (425)
T cd05197 76 DFVINQFRVGGLTYREKDEQIPLKYGVIGQETVGPGGTFSGLRQIPYVLDIARKXEKLSPDAWYLNFTNPAGEVTEAV-- 153 (425)
T ss_pred CEEEEeeecCChHHHHHHHhHHHHcCcccccccCcchhhhhhhhHHHHHHHHHHHHHhCCCcEEEecCChHHHHHHHH--
Confidence 9999983 3 2556652 2 467789999999999999999999999999999999998654
Q ss_pred HHHHhCCCCCCcEEEechhcHHHHHHHHHHHhCCCCCCCceeEEe-ecCCCccccccccCCC------------------
Q 017551 150 VFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG-GHAGVTILPLLSQVKP------------------ 210 (369)
Q Consensus 150 ~~~~~~~~~~~kviG~t~Ld~~R~~~~la~~lgv~~~~V~~~viG-~hg~~~~vp~~S~~~~------------------ 210 (369)
++. +|+.|+||+|+. +.|+++++|+.+|+++++|+++++| ||+. +||..++
T Consensus 154 --~~~--~p~~rviG~c~~-~~r~~~~ia~~lgv~~~~v~~~v~GlnHg~-----~~s~~~~~G~~l~p~l~~~~~~~~~ 223 (425)
T cd05197 154 --RRY--VPPEKAVGLCNV-PIGVMEIVAKLLGESEEKVDWQYAGLNHGI-----WLNRVRYNGGDVTPKLDEWVEEKSK 223 (425)
T ss_pred --HHh--CCCCcEEEECCC-HHHHHHHHHHHhCCCHHHeEEEEEeccCeE-----eeEeEEECCeecHHHHHHHHhccCc
Confidence 665 477899999887 8999999999999999999999999 9984 3332211
Q ss_pred --------------------------CCC------CCH----H-------------HHHHHHhhhccchhhhhh-----h
Q 017551 211 --------------------------PCS------FTQ----E-------------ETEYLTNRIQNGGTEVVE-----A 236 (369)
Q Consensus 211 --------------------------~~~------~~~----~-------------~~~~l~~~v~~~~~ev~~-----~ 236 (369)
++. +.+ + +..+..+++.+....+.. .
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~g~~p~~Yl~yy~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~~~~~~~~~~~~~~ 303 (425)
T cd05197 224 DWKTENPFVDQLSPAAIDFYRFYGVLPNPYLRYYLSWDKXRKLEADKEITWKTRADEVGKVEKELFEVYKFIKENPSVVE 303 (425)
T ss_pred cccccccccccccchHHHHHHhCCCcccCCccccCccchhhhhhHHhhcccCccHHHHHHHHHHHHHHHhhhhhcCChhh
Confidence 000 000 0 000111111110000000 0
Q ss_pred hccCCchhhHHHHHHHHHHHHHHhccCCCCceeEEE-eecCCC---CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHH
Q 017551 237 KAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV---TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLF 312 (369)
Q Consensus 237 k~g~g~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~---~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L 312 (369)
...++.+.+ +..++++++||++|.+. ++.++ .++|.+ |+|.++++||+|+++|+.++.. ++|++..++++
T Consensus 304 ~~~r~~~~~--~e~a~~ii~ai~~~~~~---~~~vNv~N~G~I~nLp~d~vVEvp~~v~~~Gi~P~~v-g~lp~~~~~Li 377 (425)
T cd05197 304 LIKRGGRKY--SEAAIPLIRALLNDNGA---RFVVNTRNNGAIANIDDDVVVEVPCLVDKNGPHPIKV-GPLDRFVKGLL 377 (425)
T ss_pred hhhcCCccc--HHHHHHHHHHHHcCCCe---EEEEECCCCCCCCCCCCCCEEEEeEEEcCCCceeccc-CCCCHHHHHHH
Confidence 001123334 47889999999998764 44444 688886 8999999999999999999775 69999988888
Q ss_pred HHHHH
Q 017551 313 CLLHL 317 (369)
Q Consensus 313 ~~~~~ 317 (369)
+.-..
T Consensus 378 ~~~~~ 382 (425)
T cd05197 378 RQRKM 382 (425)
T ss_pred HHHHH
Confidence 85543
No 37
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=100.00 E-value=5.6e-33 Score=240.09 Aligned_cols=139 Identities=38% Similarity=0.602 Sum_probs=124.0
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV 98 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~ 98 (369)
|||+||||+|.||+++++.|+++++++||+|+|+++ ++|+++||+|+.............+ +++++|||+||+++|.
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~-~~~~~~aDivvitag~ 79 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSGD-YEALKDADIVVITAGV 79 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEESS-GGGGTTESEEEETTST
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccccc-ccccccccEEEEeccc
Confidence 699999999999999999999999999999999997 7999999999875333332222234 6899999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEE
Q 017551 99 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLG 164 (369)
Q Consensus 99 p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG 164 (369)
||+||++|.+++..|+++++++++++.+++|+++++++|||+|+++++ +++.+++||+|+||
T Consensus 80 ~~~~g~sR~~ll~~N~~i~~~~~~~i~~~~p~~~vivvtNPvd~~t~~----~~~~s~~~~~kviG 141 (141)
T PF00056_consen 80 PRKPGMSRLDLLEANAKIVKEIAKKIAKYAPDAIVIVVTNPVDVMTYV----AQKYSGFPPNKVIG 141 (141)
T ss_dssp SSSTTSSHHHHHHHHHHHHHHHHHHHHHHSTTSEEEE-SSSHHHHHHH----HHHHHTSSGGGEEE
T ss_pred cccccccHHHHHHHhHhHHHHHHHHHHHhCCccEEEEeCCcHHHHHHH----HHHhhCcCcccCcC
Confidence 999999999999999999999999999999999999999999988765 48899999999998
No 38
>cd05296 GH4_P_beta_glucosidase Glycoside Hydrolases Family 4; Phospho-beta-glucosidase. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP-PTS). After translocation, these phospho-disaccharides may be hydrolyzed by the GH4 glycoside hydrolases such as the phospho-beta-glucosidases. Other organisms (such as archaea and Thermotoga maritima ) lack the PEP-PTS system, but have several enzymes normally associated with the PEP-PTS operon. The 6-phospho-beta-glucosidase from Thermotoga maritima hydrolylzes cellobiose 6-phosphate (6P) into glucose-6P and glucose, in an NAD+ and Mn2+ dependent fashion. The Escherichia coli 6-phospho-beta-glucosidase (also called celF) hydrolyzes a variety of phospho-beta-glucosides including cellobiose-6P, salicin-6P, arbutin-6P, and gentobiose-6P. Phospho-beta-glucosidases are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein
Probab=100.00 E-value=2.5e-31 Score=266.96 Aligned_cols=279 Identities=20% Similarity=0.255 Sum_probs=191.8
Q ss_pred CEEEEEcCCCccHHH-HHHHHHhC-C--CCcEEEEEeCC-C-chhHHH----HhhcccCCCeEEEEeCCCChhhhcCCCc
Q 017551 21 FKVAILGAAGGIGQP-LAMLMKIN-P--LVSVLHLYDVV-N-TPGVTA----DISHMDTGAVVRGFLGQPQLENALTGMD 90 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~-la~~l~~~-~--~~~el~L~D~~-~-~~g~~~----dL~~~~~~~~v~~~~~t~dl~~al~~AD 90 (369)
+||+|||| |+.-.. +...|++. + ..+||+|+|++ + ....+. .+.... ...+++.. |+|+++|++|||
T Consensus 1 ~KI~iIGa-GS~~tp~li~~l~~~~~~l~~~ei~L~Did~~~rl~~v~~~~~~~~~~~-~~~~~v~~-t~d~~~al~gad 77 (419)
T cd05296 1 MKLTIIGG-GSSYTPELIEGLIRRYEELPVTELVLVDIDEEEKLEIVGALAKRMVKKA-GLPIKVHL-TTDRREALEGAD 77 (419)
T ss_pred CEEEEECC-chHhHHHHHHHHHhccccCCCCEEEEecCChHHHHHHHHHHHHHHHHhh-CCCeEEEE-eCCHHHHhCCCC
Confidence 69999999 754221 22234442 3 36899999999 5 222222 222222 34555543 789999999999
Q ss_pred EEEEcCCCCCCCCCCHH--------------------HHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHH
Q 017551 91 LVIIPAGVPRKPGMTRD--------------------DLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEV 150 (369)
Q Consensus 91 iVii~ag~p~k~g~~r~--------------------~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~ 150 (369)
|||+++++++.++++++ ..+.+|++++++++++|+++||+||+|++|||++++|++
T Consensus 78 fVi~~~~vg~~~~r~~de~i~~~~Gi~gqET~G~GG~~~a~rni~ii~~i~~~i~~~~Pda~lin~TNP~~ivt~a---- 153 (419)
T cd05296 78 FVFTQIRVGGLEARALDERIPLKHGVIGQETTGAGGFAKALRTIPVILDIAEDVEELAPDAWLINFTNPAGIVTEA---- 153 (419)
T ss_pred EEEEEEeeCCcchhhhhhhhHHHcCCccccCCCcchHHHhhhhHHHHHHHHHHHHHHCCCeEEEEecCHHHHHHHH----
Confidence 99999877665555443 347899999999999999999999999999999998854
Q ss_pred HHHhCCCCCCcEEEechhcHHHHHHHHHHHhCCCCCCCceeEEe-ecCC---------Cccccccc--------------
Q 017551 151 FKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG-GHAG---------VTILPLLS-------------- 206 (369)
Q Consensus 151 ~~~~~~~~~~kviG~t~Ld~~R~~~~la~~lgv~~~~V~~~viG-~hg~---------~~~vp~~S-------------- 206 (369)
+++.+ +.|+||+|+.+ .|+++++|+.+|+++++|+++++| ||.. ++.+|.+-
T Consensus 154 ~~k~~---~~rviGlc~~~-~r~~~~ia~~lg~~~~~v~~~v~GlNH~~w~~~~~~~G~D~~p~l~~~~~~~~~~~~~~~ 229 (419)
T cd05296 154 VLRHT---GDRVIGLCNVP-IGLQRRIAELLGVDPEDVFIDYAGLNHLGWLRRVLLDGEDVLPELLEDLAALLSFEEGLL 229 (419)
T ss_pred HHHhc---cCCEEeeCCcH-HHHHHHHHHHhCCCHHHceEEEEecccceeeeeeeECCcccHHHHHHHhhhccccccccc
Confidence 46664 68999999885 899999999999999999999999 8876 24455211
Q ss_pred --cC------CCCCC------CCHHHHH--------------HHHhhh----ccchh-hhhhhhccCCchhhHHHHHHHH
Q 017551 207 --QV------KPPCS------FTQEETE--------------YLTNRI----QNGGT-EVVEAKAGAGSATLSMAYAAVK 253 (369)
Q Consensus 207 --~~------~~~~~------~~~~~~~--------------~l~~~v----~~~~~-ev~~~k~g~g~~~~s~A~a~~~ 253 (369)
.. ..|+. +.++.++ ++.+++ .+... +.-+....++.+.|+ ..+++
T Consensus 230 ~~~~~~~~~g~~p~~Yl~yy~~~~~~~~~~~~~~~~r~e~~~~~~~~l~~~~~~~~~~~~~~~~~~r~g~~y~--e~a~~ 307 (419)
T cd05296 230 FGPELLRALGALPNEYLRYYYQTDEALEEILEAAGTRGEVVKEVEKELFELYKDPNLDEKPKELEKRGGAGYS--EAALA 307 (419)
T ss_pred hHHHHHHhcCCcccchHHHHCCcHHHHHHhhhhccchHHHHHHHHHHHHHHHhccccccChHhhHhhcCcchH--HHHHH
Confidence 00 00111 1121111 111111 11100 000000012334444 78899
Q ss_pred HHHHHHhccCCCCceeEE-EeecCCC---CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHH
Q 017551 254 FADACLRGLRGDAGVVEC-AFVASQV---TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLH 316 (369)
Q Consensus 254 li~ai~~~~~~~~~v~~~-~~~~g~~---~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~ 316 (369)
+++||++|.+. .+.+ +.++|.+ |+|.++++||+++++|+.++.. ++|++...++++...
T Consensus 308 ii~ai~~~~~~---~~~vNv~N~G~I~~Lp~d~vVEvp~~v~~~G~~P~~v-g~lP~~~~~l~~~~~ 370 (419)
T cd05296 308 LISAIYNDKGD---IHVVNVRNNGAIPGLPDDAVVEVPCVVDADGAHPLPV-GPLPPAILGLIQQVK 370 (419)
T ss_pred HHHHHhcCCCc---EEEEECCCCCCCCCCCCCCEEEEeEEEcCCCceeccC-CCCCHHHHHHHHHHH
Confidence 99999988763 3434 4688887 8999999999999999999765 699999998877554
No 39
>PRK15076 alpha-galactosidase; Provisional
Probab=100.00 E-value=1.8e-31 Score=269.22 Aligned_cols=278 Identities=18% Similarity=0.158 Sum_probs=194.0
Q ss_pred CEEEEEcCCCccHHHHHH--HHH-hCCCC-cEEEEEeCCC--ch-hHHHHhhccc--CCCeEEEEeCCCChhhhcCCCcE
Q 017551 21 FKVAILGAAGGIGQPLAM--LMK-INPLV-SVLHLYDVVN--TP-GVTADISHMD--TGAVVRGFLGQPQLENALTGMDL 91 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~--~l~-~~~~~-~el~L~D~~~--~~-g~~~dL~~~~--~~~~v~~~~~t~dl~~al~~ADi 91 (369)
+||+|||| |++|.+.++ .++ ...+. .||+|+|+++ +. +... +.+.. .....++. .++|+++|++||||
T Consensus 2 ~KIaIIGa-Gsvg~~~~~~~~i~~~~~l~~~evvLvDid~er~~~~~~l-~~~~~~~~~~~~~i~-~ttD~~eal~dADf 78 (431)
T PRK15076 2 PKITFIGA-GSTVFTKNLLGDILSVPALRDAEIALMDIDPERLEESEIV-ARKLAESLGASAKIT-ATTDRREALQGADY 78 (431)
T ss_pred cEEEEECC-CHHHhHHHHHHHHhhCccCCCCEEEEECCCHHHHHHHHHH-HHHHHHhcCCCeEEE-EECCHHHHhCCCCE
Confidence 69999999 999998887 555 34443 4999999998 22 3333 33332 12334443 26788899999999
Q ss_pred EEEcCCCC-CCCC--------------CCHHHH--------HHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHH
Q 017551 92 VIIPAGVP-RKPG--------------MTRDDL--------FNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAA 148 (369)
Q Consensus 92 Vii~ag~p-~k~g--------------~~r~~~--------~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~a 148 (369)
||++++++ ++++ ++|.+. +.+|++++++++++|+++||+||+|++|||+|++|+.+
T Consensus 79 Vv~ti~vg~~~~~~~~De~Iplk~G~~~~r~et~G~GG~~~~~r~i~~i~~i~~~i~~~~p~a~iin~tNP~divt~~~- 157 (431)
T PRK15076 79 VINAIQVGGYEPCTVTDFEIPKKYGLRQTIGDTLGIGGIMRALRTIPVLLDICEDMEEVCPDALLLNYVNPMAMNTWAM- 157 (431)
T ss_pred EeEeeeeCCcchhhhhhhhhHHHcCCeeecccCcCccchhhhhhhHHHHHHHHHHHHHHCCCeEEEEcCChHHHHHHHH-
Confidence 99998876 4444 556666 89999999999999999999999999999999998644
Q ss_pred HHHHHhCCCCCCcEEEech--hcHHHHHHHHHHHhCCCCCCCceeEEe-ecCC---------Ccccccccc---C-----
Q 017551 149 EVFKKAGTYDPKKLLGVTM--LDVVRANTFVAEVLGLDPRDVDVPVVG-GHAG---------VTILPLLSQ---V----- 208 (369)
Q Consensus 149 e~~~~~~~~~~~kviG~t~--Ld~~R~~~~la~~lgv~~~~V~~~viG-~hg~---------~~~vp~~S~---~----- 208 (369)
+ ++|+.||||+|+ +|+. +.+|+.+|+++++|++++.| ||.. ++.+|.+.. .
T Consensus 158 ---~---~~~~~rviG~c~~~~~~~---~~ia~~l~v~~~~v~~~~~GlNH~~W~~~~~~~G~D~~p~l~~~~~~~~~~~ 228 (431)
T PRK15076 158 ---N---RYPGIKTVGLCHSVQGTA---EQLARDLGVPPEELRYRCAGINHMAWYLELERKGEDLYPELRAAAAEGQTRC 228 (431)
T ss_pred ---h---cCCCCCEEEECCCHHHHH---HHHHHHhCCCHHHeEEEEEeecchhhheeeeECCcchHHHHHHHHhccCchh
Confidence 4 578899999983 7764 88999999999999999999 5544 233432111 0
Q ss_pred --CC-----------CC------------C-C--CHHHHHHHHhhh---ccchhh-------hh-hhhccCCchh--hHH
Q 017551 209 --KP-----------PC------------S-F--TQEETEYLTNRI---QNGGTE-------VV-EAKAGAGSAT--LSM 247 (369)
Q Consensus 209 --~~-----------~~------------~-~--~~~~~~~l~~~v---~~~~~e-------v~-~~k~g~g~~~--~s~ 247 (369)
.+ +. . . .++.++++..++ .++..+ .. +... |... -..
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~y~~y~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 306 (431)
T PRK15076 229 QDKVRYEMLKRFGYFVTESSEHFAEYVPWFIKPGRPDLIERFNIPLDEYPRRCEEQIANWEKEREELAN--AERIEIKRS 306 (431)
T ss_pred cccccHHHHHHhCCCcccchhhhhhhhcccCcCCCHHHHHHhhcccchhhhhHHHHhhhHHHHHHHhhC--CCccccccc
Confidence 00 00 0 1 233333222110 111111 11 1111 2111 114
Q ss_pred HHHHHHHHHHHHhccCCCCceeEE-EeecCCC---CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHH
Q 017551 248 AYAAVKFADACLRGLRGDAGVVEC-AFVASQV---TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHL 317 (369)
Q Consensus 248 A~a~~~li~ai~~~~~~~~~v~~~-~~~~g~~---~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~ 317 (369)
+..++++++||.+|.+. ++.+ +.++|.+ |+|.++++||+++++|+.++.. ++|++..+++++.-..
T Consensus 307 ~e~a~~ii~ai~~~~~~---~~~vnv~N~G~I~~Lp~d~vVEvp~~v~~~G~~P~~~-g~lP~~~~~l~~~~~~ 376 (431)
T PRK15076 307 REYASTIIEAIETGEPS---VIYGNVRNNGLIDNLPQGCCVEVPCLVDRNGIQPTKV-GDLPPQLAALNRTNIN 376 (431)
T ss_pred hHHHHHHHHHHhcCCce---EEEEECCCCCcCCCCCCCCEEEEeEEEcCCcceeeec-CCCCHHHHHHHHHHHH
Confidence 57899999999988763 4444 4688876 8999999999999999999876 6999999999885554
No 40
>PF02866 Ldh_1_C: lactate/malate dehydrogenase, alpha/beta C-terminal domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR022383 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the C-terminal, and is thought to be an is an unusual alpha+beta fold.; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0055114 oxidation-reduction process; PDB: 4MDH_B 5MDH_A 1GV0_A 1GUZ_D 2EWD_B 2FRM_D 2FNZ_B 2FN7_B 2FM3_A 1LTH_T ....
Probab=99.98 E-value=4.6e-32 Score=242.33 Aligned_cols=153 Identities=31% Similarity=0.469 Sum_probs=135.3
Q ss_pred chhcHHHHHHHHHHHhCCCCCCCceeEEeecCCCccccccccCCCC-----------CCCCHHHHHHHHhhhccchhhhh
Q 017551 166 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPP-----------CSFTQEETEYLTNRIQNGGTEVV 234 (369)
Q Consensus 166 t~Ld~~R~~~~la~~lgv~~~~V~~~viG~hg~~~~vp~~S~~~~~-----------~~~~~~~~~~l~~~v~~~~~ev~ 234 (369)
|.||++||+++||+++|++|++++++||||||+ +++|+||++++. ..+++++++++.+++++++++|+
T Consensus 1 T~LDs~R~~~~la~~l~v~~~~v~~~ViGeHg~-s~~~~~S~~~v~g~pl~~~~~~~~~~~~~~~~~l~~~v~~~g~~ii 79 (174)
T PF02866_consen 1 TMLDSARFRYFLAEKLGVNPSSVNAYVIGEHGD-SQVPDWSHAKVGGVPLLSYAKPSGKLSEEELEELTERVRKAGYEII 79 (174)
T ss_dssp THHHHHHHHHHHHHHHTSGGGGEEEEEEBSSST-TEEEEGGGEEETTEEHHHHHHTTTSSSHHHHHHHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHCcCccceEEEEEecCCc-ceeeeeecccccccccccccccccchhHHhhhccccccEeccceee
Confidence 689999999999999999999999999999999 999999999874 23667788999999999999999
Q ss_pred hhhccCCchhhHHHHHHHHHHHHHHhccCCCCceeEEE-eecCCC--CCc-cEEEEEEEEcCCCeEEEccCCCCCHHHHH
Q 017551 235 EAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV--TEL-PFFASKVRLGRQGAEEIFQLGPLNEYESG 310 (369)
Q Consensus 235 ~~k~g~g~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~--~~~-~~~svPv~lg~~Gv~~~~~~~~L~~~E~~ 310 (369)
+.|. |+++||+|+|+++++++|++|.+ .+++++ +.+|+| +++ +|||+||++|++|+++++++++|+++|++
T Consensus 80 ~~k~--g~t~~s~A~a~~~~v~ail~~~~---~i~~~sv~~~g~yg~~~~~v~~s~P~~ig~~Gv~~i~~~~~L~~~E~~ 154 (174)
T PF02866_consen 80 KAKG--GSTSYSIAAAAARIVEAILKDER---RILPVSVYLDGEYGIPDGCVYFSVPVVIGKNGVEKIVEDLPLSEEEQE 154 (174)
T ss_dssp HHHS--SSCHHHHHHHHHHHHHHHHTTHT---EEEEEEEEEESGGGEESSSEEEEEEEEEETTEEEEEECSBSSTHHHHH
T ss_pred eecc--ccCcCCHHHHHHHHHHHHhhccc---ccccceeccccccCcccccceecceEEEcCCeeEEEeCCCCCCHHHHH
Confidence 9763 89999999999999999999985 477775 789999 344 99999999999999999984499999999
Q ss_pred HHHHHHHHHHHHHH
Q 017551 311 LFCLLHLCFQDWLG 324 (369)
Q Consensus 311 ~L~~~~~~i~~~l~ 324 (369)
+|++++..|++.++
T Consensus 155 ~l~~sa~~l~~~i~ 168 (174)
T PF02866_consen 155 KLKESAKELKKEIE 168 (174)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999954444443
No 41
>cd05298 GH4_GlvA_pagL_like Glycoside Hydrolases Family 4; GlvA- and pagL-like glycosidases. Bacillus subtilis GlvA and Clostridium acetobutylicum pagL are 6-phospho-alpha-glucosidase, catalyzing the hydrolysis of alpha-glucopyranoside bonds to release glucose from oligosaccharides. The substrate specificities of other members of this subgroup are unknown. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP_PTS). After translocation, these phospho-disaccharides may be hydrolyzed by the GH4 glycoside hydrolases, which include 6-phospho-beta-glucosidases, 6-phospho-alpha-glucosidases, alpha-glucosidases/alpha-glucuronidases (only from Thermotoga), and alpha-galactosidases. Members of this subfamily are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductas
Probab=99.97 E-value=2.2e-29 Score=253.82 Aligned_cols=281 Identities=19% Similarity=0.256 Sum_probs=190.1
Q ss_pred CEEEEEcCCCccHHHHHH----HHHhC-C--CCcEEEEEeCCC-chhHHHHhhccc---CCCeEEEEeCCCChhhhcCCC
Q 017551 21 FKVAILGAAGGIGQPLAM----LMKIN-P--LVSVLHLYDVVN-TPGVTADISHMD---TGAVVRGFLGQPQLENALTGM 89 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~----~l~~~-~--~~~el~L~D~~~-~~g~~~dL~~~~---~~~~v~~~~~t~dl~~al~~A 89 (369)
|||+|||| |+ ++++ .|.+. + ..+||+|+|+++ ....+..+.+.. ....+++.. |+|+++|++||
T Consensus 1 ~KI~iIGa-GS---~~tp~li~~l~~~~~~l~~~ei~L~DId~~rl~~v~~l~~~~~~~~g~~~~v~~-Ttdr~eAl~gA 75 (437)
T cd05298 1 FKIVIAGG-GS---TYTPGIVKSLLDRKEDFPLRELVLYDIDAERQEKVAEAVKILFKENYPEIKFVY-TTDPEEAFTDA 75 (437)
T ss_pred CeEEEECC-cH---HHHHHHHHHHHhCcccCCCCEEEEECCCHHHHHHHHHHHHHHHHhhCCCeEEEE-ECCHHHHhCCC
Confidence 79999999 74 3444 33444 2 358999999998 222333333221 234566554 78999999999
Q ss_pred cEEEEcC---C---------CCCCCCC---C-----HHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHH
Q 017551 90 DLVIIPA---G---------VPRKPGM---T-----RDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAE 149 (369)
Q Consensus 90 DiVii~a---g---------~p~k~g~---~-----r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae 149 (369)
||||.+. | +|.|+|. + ....+.||++++.++++.|+++||+||+|++|||++++|..+
T Consensus 76 DfVi~~irvGg~~~r~~De~Ip~kyGi~gqET~G~GG~~~alRtip~~~~i~~~i~~~~pda~lin~tNP~~~vt~~~-- 153 (437)
T cd05298 76 DFVFAQIRVGGYAMREQDEKIPLKHGVVGQETCGPGGFAYGLRSIGPMIELIDDIEKYSPDAWILNYSNPAAIVAEAL-- 153 (437)
T ss_pred CEEEEEeeeCCchHHHHHHhHHHHcCcceecCccHHHHHHHHhhHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHH--
Confidence 9999973 3 2556653 2 466789999999999999999999999999999999998654
Q ss_pred HHHHhCCCCCCcEEEechhcHHHHHHHHHHHhCCCCCCCceeEEe-ecCC----------Ccccccccc-----------
Q 017551 150 VFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG-GHAG----------VTILPLLSQ----------- 207 (369)
Q Consensus 150 ~~~~~~~~~~~kviG~t~Ld~~R~~~~la~~lgv~~~~V~~~viG-~hg~----------~~~vp~~S~----------- 207 (369)
++. +|..|+||+|+.... ++..+|+.+|+++++++..+.| ||.. ++.+|.+..
T Consensus 154 --~~~--~~~~kviGlC~~~~~-~~~~la~~lg~~~~~v~~~~~GlNH~~w~~~~~~~~G~D~~p~l~e~~~~~~~~~~~ 228 (437)
T cd05298 154 --RRL--FPNARILNICDMPIA-IMDSMAAILGLDRKDLEPDYFGLNHFGWFTKIYDKQGEDLLPKLREHVKENGYLPPD 228 (437)
T ss_pred --HHH--CCCCCEEEECCcHHH-HHHHHHHHhCCCHHHceEEEEeecchhhhhheEECCCCchHHHHHHHHhccCCCccc
Confidence 555 788999999987654 7888999999999999999888 3332 234443210
Q ss_pred ---C---C-------------------CCCC-----C-CHH--------------HHHHHHhhhccchhhhhhhhccCCc
Q 017551 208 ---V---K-------------------PPCS-----F-TQE--------------ETEYLTNRIQNGGTEVVEAKAGAGS 242 (369)
Q Consensus 208 ---~---~-------------------~~~~-----~-~~~--------------~~~~l~~~v~~~~~ev~~~k~g~g~ 242 (369)
. . +++. + .++ .+++..+++.+...++.....-+..
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~p~~y~~yy~~~~~~~~~~~~~~~~~~e~~~~~~~~l~~~~~~~~~~~~~~~~ 308 (437)
T cd05298 229 SDEEHRDPSWNDTFANAKDMMADFPDYLPNTYLQYYLYPDYMVEHSNPNYTRANEVMDGREKRVFEECRKIIETGTAEGS 308 (437)
T ss_pred ccccccccCchHHHHHHhhHHHhCCCcCCCchhhHhCChHHHHHHhccccccHHHHHHHHHHHHHHHHhhhhhcCChhhh
Confidence 0 0 1111 0 111 1111111111111100000000000
Q ss_pred hhh--HHHHHHHHHHHHHHhccCCCCceeEEE-eecCCC---CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHH
Q 017551 243 ATL--SMAYAAVKFADACLRGLRGDAGVVECA-FVASQV---TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLH 316 (369)
Q Consensus 243 ~~~--s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~---~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~ 316 (369)
... ..|.+++++++||++|.+ .+++++ +++|.| ++|+++|+||+||++|+.++.- ++|++...++++.-.
T Consensus 309 ~~~~~~ya~~a~~ii~aI~~d~~---~~~~vnv~n~G~i~nL~~d~~vevP~~v~~~Gi~pi~v-g~lP~~~~~l~~~~~ 384 (437)
T cd05298 309 TFHVDVHGEYIVDLAASIAYNTK---ERFLVIVENNGAIPNLPDDAMVEVPAYIGSNGPEPLVV-GKIPTFYKGLMEQQV 384 (437)
T ss_pred hhhccchHHHHHHHHHHHHcCCC---eEEEEEeecCCccCCCCCCcEEEEEEEEeCCCceeccc-CCCCHHHHHHHHHHH
Confidence 110 146889999999999876 367775 788887 7899999999999999999875 799999999877544
Q ss_pred H
Q 017551 317 L 317 (369)
Q Consensus 317 ~ 317 (369)
.
T Consensus 385 ~ 385 (437)
T cd05298 385 A 385 (437)
T ss_pred H
Confidence 3
No 42
>COG1486 CelF Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases [Carbohydrate transport and metabolism]
Probab=99.96 E-value=1.6e-28 Score=243.32 Aligned_cols=284 Identities=22% Similarity=0.245 Sum_probs=192.0
Q ss_pred CCCEEEEEcCCCccHHHHHH--HHHhCC--CCcEEEEEeCCC-chhHHHHhhccc---CCCeEEEEeCCCChhhhcCCCc
Q 017551 19 AGFKVAILGAAGGIGQPLAM--LMKINP--LVSVLHLYDVVN-TPGVTADISHMD---TGAVVRGFLGQPQLENALTGMD 90 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~--~l~~~~--~~~el~L~D~~~-~~g~~~dL~~~~---~~~~v~~~~~t~dl~~al~~AD 90 (369)
+..||+|||| |+.+.+... .|.+.+ .+.||+|||+++ ......++.+.. ....+++.. |+|+++||+|||
T Consensus 2 ~~~KI~iIGg-GSt~tp~~v~g~l~~~e~l~~~el~L~Did~~r~~~i~~~~~~~v~~~g~~~kv~~-ttd~~eAl~gAd 79 (442)
T COG1486 2 KKFKIVIIGG-GSTYTPKLLLGDLARTEELPVRELALYDIDEERLKIIAILAKKLVEEAGAPVKVEA-TTDRREALEGAD 79 (442)
T ss_pred CcceEEEECC-CccccHHHHHHHHhcCccCCcceEEEEeCCHHHHHHHHHHHHHHHHhhCCCeEEEE-ecCHHHHhcCCC
Confidence 4579999999 866555432 334444 468999999998 333333333322 234466654 789999999999
Q ss_pred EEEEcC---C---------CCCCCCC---C-----HHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHH
Q 017551 91 LVIIPA---G---------VPRKPGM---T-----RDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEV 150 (369)
Q Consensus 91 iVii~a---g---------~p~k~g~---~-----r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~ 150 (369)
||+.+. | +|.|+|. + ......|+++++.+|+++|+++||+||++++|||+.++|. +
T Consensus 80 fVi~~~rvG~l~~r~~De~IplkyG~~gqET~G~GGi~~glRtIpvildi~~~m~~~~P~Aw~lNytNP~~~vTe----A 155 (442)
T COG1486 80 FVITQIRVGGLEAREKDERIPLKHGLYGQETNGPGGIFYGLRTIPVILDIAKDMEKVCPNAWMLNYTNPAAIVTE----A 155 (442)
T ss_pred EEEEEEeeCCcccchhhhccchhhCccccccccccHHHhhcccchHHHHHHHHHHHhCCCceEEeccChHHHHHH----H
Confidence 999973 2 3777762 2 4566789999999999999999999999999999999985 4
Q ss_pred HHHhCCCCCCcEEEechhcHHHHHHHHHHHhCCCC-CCCceeEEe-ecCC---------Ccccccccc------------
Q 017551 151 FKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDP-RDVDVPVVG-GHAG---------VTILPLLSQ------------ 207 (369)
Q Consensus 151 ~~~~~~~~~~kviG~t~Ld~~R~~~~la~~lgv~~-~~V~~~viG-~hg~---------~~~vp~~S~------------ 207 (369)
+++. +|.-|++|+|+.... ....||+.||+++ ++++.-+.| ||.. .+.+|.+..
T Consensus 156 v~r~--~~~~K~VGlCh~~~g-~~~~lAe~L~~~~~~~l~~~~aGlNH~~w~~~~~~~G~d~~p~l~~~~~~~~~~~~~~ 232 (442)
T COG1486 156 VRRL--YPKIKIVGLCHGPIG-IAMELAEVLGLEPREDLRYRVAGLNHMVWILRVRDDGEDLYPELLEALEEGGSPSEPE 232 (442)
T ss_pred HHHh--CCCCcEEeeCCchHH-HHHHHHHHhCCCchhceeEEEeechhhhhhhHhhhcCccchHHHHHHHhccccCCccc
Confidence 4664 553499999997643 6899999999975 999999888 4443 122222111
Q ss_pred -----------CC----C---CCC-----------------------CCHHHHHHHHhhhccchhh--hhhh---hccCC
Q 017551 208 -----------VK----P---PCS-----------------------FTQEETEYLTNRIQNGGTE--VVEA---KAGAG 241 (369)
Q Consensus 208 -----------~~----~---~~~-----------------------~~~~~~~~l~~~v~~~~~e--v~~~---k~g~g 241 (369)
.. + ++. ...+++.+..++..+.-.+ +... ...++
T Consensus 233 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ra~ev~~re~~~~~~~~~~~~~~~p~~~~~~~ 312 (442)
T COG1486 233 NKNIQSPVWIDMFLKYGYPVLPSSYHRYYYYPYDMKEKKPDEIEKFGTRANEVMKREKELFELYKKPELKEKPEELEKRI 312 (442)
T ss_pred cccccCcchHHHHHHhCcCcccCcchhhheehHhhhhccchhhhhcCCCHHHHHHHHHHHHHHHhhhhhhcCchhhhhcC
Confidence 00 0 000 0111221111111110000 0000 01122
Q ss_pred ch--hhHHHHHHHHHHHHHHhccCCCCceeEEE-eecCCC---CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHH
Q 017551 242 SA--TLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV---TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLL 315 (369)
Q Consensus 242 ~~--~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~---~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~ 315 (369)
.+ .++ .+++++++||++|.+. ++.++ .++|.+ |+|.++++||+||++|+.++.. |+|+++.++++++.
T Consensus 313 ~~~~~~~--e~a~~ii~Ai~~~~~~---~~~vNv~N~G~I~nlp~D~vVEvpc~Vd~~Gi~P~~~-g~lP~~~~~l~~~~ 386 (442)
T COG1486 313 GAGKYSS--EYASNIINAIENNKPS---RIYVNVRNNGAITNLPDDAVVEVPCLVDRNGIHPLAV-GDLPEFVKGLMHTN 386 (442)
T ss_pred CcccccH--HHHHHHHHHHhcCCce---EEEEEcCCCccccCCCCCeEEEeeEEecCCCCccccc-CCCCHHHHHHHHHH
Confidence 32 333 7889999999999774 44454 689987 8999999999999999999776 79999999988866
Q ss_pred HH
Q 017551 316 HL 317 (369)
Q Consensus 316 ~~ 317 (369)
..
T Consensus 387 i~ 388 (442)
T COG1486 387 IN 388 (442)
T ss_pred HH
Confidence 54
No 43
>cd05297 GH4_alpha_glucosidase_galactosidase Glycoside Hydrolases Family 4; Alpha-glucosidases and alpha-galactosidases. linked to 3D####ucture
Probab=99.96 E-value=1.8e-27 Score=240.02 Aligned_cols=281 Identities=18% Similarity=0.150 Sum_probs=193.3
Q ss_pred CEEEEEcCCCccHHHHHH--HHHhC-CC-CcEEEEEeCCC--chhHHHHhhccc--CCCeEEEEeCCCChhhhcCCCcEE
Q 017551 21 FKVAILGAAGGIGQPLAM--LMKIN-PL-VSVLHLYDVVN--TPGVTADISHMD--TGAVVRGFLGQPQLENALTGMDLV 92 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~--~l~~~-~~-~~el~L~D~~~--~~g~~~dL~~~~--~~~~v~~~~~t~dl~~al~~ADiV 92 (369)
+||+|||| |++|++++. .+++. .. ..+|+|||+++ +.....++.+.. .....++. .++|+++|++|||+|
T Consensus 1 ~KIaIIGa-Gs~G~a~a~~~~i~~~~~~~g~eV~L~Did~e~l~~~~~~~~~~~~~~~~~~~I~-~ttD~~eal~~AD~V 78 (423)
T cd05297 1 IKIAFIGA-GSVVFTKNLVGDLLKTPELSGSTIALMDIDEERLETVEILAKKIVEELGAPLKIE-ATTDRREALDGADFV 78 (423)
T ss_pred CeEEEECC-ChHHhHHHHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHhcCCCeEEE-EeCCHHHHhcCCCEE
Confidence 59999999 999999877 45433 33 34999999998 444444444332 12223332 267899999999999
Q ss_pred EEcCCCCCCCCCCH----------------------HHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHH
Q 017551 93 IIPAGVPRKPGMTR----------------------DDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEV 150 (369)
Q Consensus 93 ii~ag~p~k~g~~r----------------------~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~ 150 (369)
|++++.+..+++++ .....+|++++.++++.+.++||++|++++|||++++|+++
T Consensus 79 i~ai~~~~~~~~~~de~i~~K~g~~~~~~~t~g~ggi~~~~~s~~~i~~ia~~i~~~~p~a~~i~~tNPv~i~t~~~--- 155 (423)
T cd05297 79 INTIQVGGHEYTETDFEIPEKYGYYQTVGDTSGPGGIFRALRTIPVLLDIARDIEELCPDAWLLNYANPMAELTWAL--- 155 (423)
T ss_pred EEeeEecCccchhhhhhhHHHcCeeeeccCCCcHHHHHHHHhhHHHHHHHHHHHHHHCCCCEEEEcCChHHHHHHHH---
Confidence 99987655444433 56778999999999999999999999999999999998654
Q ss_pred HHHhCCCCCCcEEEechhcHHHHHHHHHHHhCCCCCCCceeEEe-ecCC---------Ccccccccc-----------CC
Q 017551 151 FKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG-GHAG---------VTILPLLSQ-----------VK 209 (369)
Q Consensus 151 ~~~~~~~~~~kviG~t~Ld~~R~~~~la~~lgv~~~~V~~~viG-~hg~---------~~~vp~~S~-----------~~ 209 (369)
++.++ .|+||+|+. +.|++..+|+.+|+++++|+++++| ||.. ++.+|.+-. ..
T Consensus 156 -~k~~~---~rviG~c~~-~~~~~~~~a~~l~~~~~~v~~~~~GlNH~~w~~~~~~~G~d~~p~l~~~~~~~~~~~~~~~ 230 (423)
T cd05297 156 -NRYTP---IKTVGLCHG-VQGTAEQLAKLLGEPPEEVDYQVAGINHMAWLLKFEYNGEDLYPLLDEWIEEGSEEWDQLS 230 (423)
T ss_pred -HHhCC---CCEEEECCc-HHHHHHHHHHHhCCCHHHeEEEEEeeccHhhhhhheECCcchHHHHHHHHhccCccchhcc
Confidence 67654 799999875 6789999999999999999999999 5543 234442111 11
Q ss_pred -CC-----------C-------C------CCHHHHHHHHhhhcc--------------chhhhhhhh----ccCCchhhH
Q 017551 210 -PP-----------C-------S------FTQEETEYLTNRIQN--------------GGTEVVEAK----AGAGSATLS 246 (369)
Q Consensus 210 -~~-----------~-------~------~~~~~~~~l~~~v~~--------------~~~ev~~~k----~g~g~~~~s 246 (369)
++ . . ..++..........+ ...+-.+.+ ...+...
T Consensus 231 ~~~~~~~~~~g~~p~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 308 (423)
T cd05297 231 PVRFDMYRRYGLFPTESSEHLSEYVPHYRKETKKIWYGEFNEDEYGGRDEEQGWEWYEERLKLILAEIDKEELDPVKR-- 308 (423)
T ss_pred cchHHHHHHcCCcccCcchhhhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHhhhhhccchhcchhcccccc--
Confidence 10 0 0 111111111000000 000000000 0011122
Q ss_pred HHHHHHHHHHHHHhccCCCCceeEEE-eecCCC---CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHHHH
Q 017551 247 MAYAAVKFADACLRGLRGDAGVVECA-FVASQV---TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLLHL 317 (369)
Q Consensus 247 ~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~---~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~~~ 317 (369)
.+..++++++||++|.+. ++.++ .++|.+ |+|.++++||+|+++|+.++.. ++|++...++++.-..
T Consensus 309 ~~e~a~~ii~ai~~~~~~---~~~vnv~N~G~I~~Lp~d~vVEvp~~v~~~G~~p~~~-g~lp~~~~~l~~~~~~ 379 (423)
T cd05297 309 SGEYASPIIEALVTGKPR---RINGNVPNNGLIPNLPDDVVVEVPALVDRNGIHPEKI-GPLPPQLAALIRPRIN 379 (423)
T ss_pred chHHHHHHHHHHhcCCce---EEEEECCCCCCCCCCCCCcEEEEeeEEcCCCceeccc-CCCCHHHHHHHHHHHH
Confidence 346789999999987663 44444 688886 8999999999999999999876 7999999998885554
No 44
>PF02056 Glyco_hydro_4: Family 4 glycosyl hydrolase; InterPro: IPR001088 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 4 GH4 from CAZY comprises enzymes with several known activities; 6-phospho-beta-glucosidase (3.2.1.86 from EC); 6-phospho-alpha-glucosidase (3.2.1.122 from EC); alpha-galactosidase (3.2.1.22 from EC). 6-phospho-alpha-glucosidase requires both NAD(H) and divalent metal (Mn2+, Fe2+, Co2+, or Ni2+) for activity [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1U8X_X 1S6Y_A 3FEF_B 1VJT_A 1UP4_A 1UP6_C 1UP7_E 1OBB_A.
Probab=99.88 E-value=7.6e-22 Score=176.58 Aligned_cols=152 Identities=21% Similarity=0.250 Sum_probs=108.4
Q ss_pred EEEEEcCCCccHHHHHH--HHHhCC--CCcEEEEEeCCC-chhH----HHHhhcccCCCeEEEEeCCCChhhhcCCCcEE
Q 017551 22 KVAILGAAGGIGQPLAM--LMKINP--LVSVLHLYDVVN-TPGV----TADISHMDTGAVVRGFLGQPQLENALTGMDLV 92 (369)
Q Consensus 22 KI~IiGA~G~vGs~la~--~l~~~~--~~~el~L~D~~~-~~g~----~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiV 92 (369)
||+|||| |++-.+... .+...+ ..+||+|+|+|+ .... +..+.... ..++++.. |+|+++|++|||||
T Consensus 1 KI~iIGa-GS~~~~~~l~~~l~~~~~l~~~ei~L~Did~~RL~~~~~~~~~~~~~~-~~~~~v~~-ttd~~eAl~gADfV 77 (183)
T PF02056_consen 1 KITIIGA-GSTYFPLLLLGDLLRTEELSGSEIVLMDIDEERLEIVERLARRMVEEA-GADLKVEA-TTDRREALEGADFV 77 (183)
T ss_dssp EEEEETT-TSCCHHHHHHHHHHCTTTSTEEEEEEE-SCHHHHHHHHHHHHHHHHHC-TTSSEEEE-ESSHHHHHTTESEE
T ss_pred CEEEECC-chHhhHHHHHHHHhcCccCCCcEEEEEcCCHHHHHHHHHHHHHHHHhc-CCCeEEEE-eCCHHHHhCCCCEE
Confidence 8999999 877666432 344444 356999999998 2222 22232222 34455443 68999999999999
Q ss_pred EEcCC------------CCCCCCCC----------HHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHH
Q 017551 93 IIPAG------------VPRKPGMT----------RDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEV 150 (369)
Q Consensus 93 ii~ag------------~p~k~g~~----------r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~ 150 (369)
|++.. +|+++|.. ......|+++++.+++++|+++||+||++|+|||+.++|..
T Consensus 78 i~~irvGg~~~r~~De~Ip~k~Gi~~~~~eT~G~GG~~~alRtipv~~~ia~~i~~~~PdAw~iNytNP~~~vt~a---- 153 (183)
T PF02056_consen 78 INQIRVGGLEAREIDEEIPLKYGIVGTIQETVGPGGFFRALRTIPVMLDIARDIEELCPDAWLINYTNPMGIVTEA---- 153 (183)
T ss_dssp EE---TTHHHHHHHHHHTGGCCTTT-BTTSSSTHHHHHHHHHHHHHHHHHHHHHHHHTTTSEEEE-SSSHHHHHHH----
T ss_pred EEEeeecchHHHHHHHHHHHHhCCccccccccCccHHHHHHhhHHHHHHHHHHHHHhCCCcEEEeccChHHHHHHH----
Confidence 99853 47787632 46778999999999999999999999999999999998854
Q ss_pred HHHhCCCCCCcEEEechhcHHHHHHHHHHHhCC
Q 017551 151 FKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGL 183 (369)
Q Consensus 151 ~~~~~~~~~~kviG~t~Ld~~R~~~~la~~lgv 183 (369)
+.+. +|..|++|+|+... -....+|+.||+
T Consensus 154 ~~r~--~~~~k~vGlCh~~~-~~~~~la~~L~~ 183 (183)
T PF02056_consen 154 LSRY--TPKIKVVGLCHGPQ-GTRRQLAKLLGM 183 (183)
T ss_dssp HHHH--STTSEEEEE-SHHH-HHHHHHHHHHT-
T ss_pred HHHh--CCCCCEEEECCCHH-HHHHHHHHHhCc
Confidence 4554 45579999998764 467889998874
No 45
>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]
Probab=98.89 E-value=7.7e-08 Score=94.89 Aligned_cols=115 Identities=17% Similarity=0.241 Sum_probs=86.3
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHH-------------HHhh-cccCCCeEEEEeCCCChhhhc
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVT-------------ADIS-HMDTGAVVRGFLGQPQLENAL 86 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~-------------~dL~-~~~~~~~v~~~~~t~dl~~al 86 (369)
|||+|+|. |+||...+..|++.|+ +|+++|+++.+-.. .+|. +.....++++ |+|+++|+
T Consensus 1 MkI~viGt-GYVGLv~g~~lA~~GH--eVv~vDid~~KV~~ln~g~~PI~EpgLe~ll~~~~~~gRl~f---Ttd~~~a~ 74 (414)
T COG1004 1 MKITVIGT-GYVGLVTGACLAELGH--EVVCVDIDESKVELLNKGISPIYEPGLEELLKENLASGRLRF---TTDYEEAV 74 (414)
T ss_pred CceEEECC-chHHHHHHHHHHHcCC--eEEEEeCCHHHHHHHhCCCCCCcCccHHHHHHhccccCcEEE---EcCHHHHH
Confidence 79999999 9999999999999998 99999999722111 1122 1122345665 57999999
Q ss_pred CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEe--cCCCCChhHHH
Q 017551 87 TGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI--SNPVNSTVPIA 147 (369)
Q Consensus 87 ~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~--tNPv~~~t~i~ 147 (369)
+++|+++|+.|.|.++.- ..++..+...++.|.++.+...+++. |-|++....+-
T Consensus 75 ~~adv~fIavgTP~~~dg------~aDl~~V~ava~~i~~~~~~~~vvV~KSTVPvGt~~~v~ 131 (414)
T COG1004 75 KDADVVFIAVGTPPDEDG------SADLSYVEAVAKDIGEILDGKAVVVIKSTVPVGTTEEVR 131 (414)
T ss_pred hcCCEEEEEcCCCCCCCC------CccHHHHHHHHHHHHhhcCCCeEEEEcCCCCCCchHHHH
Confidence 999999999999987631 34567788888888888876444444 78998876554
No 46
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=98.85 E-value=9.8e-09 Score=92.32 Aligned_cols=117 Identities=25% Similarity=0.401 Sum_probs=76.8
Q ss_pred EEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--ch---hHHHH-hhcc----c--------CCCeEEEEeCCCChh
Q 017551 22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TP---GVTAD-ISHM----D--------TGAVVRGFLGQPQLE 83 (369)
Q Consensus 22 KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~---g~~~d-L~~~----~--------~~~~v~~~~~t~dl~ 83 (369)
||+|||| |.+|..++..++..|+ +|+|||.+. .. ....+ |... . ...+++. ++|++
T Consensus 1 ~V~ViGa-G~mG~~iA~~~a~~G~--~V~l~d~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~i~~---~~dl~ 74 (180)
T PF02737_consen 1 KVAVIGA-GTMGRGIAALFARAGY--EVTLYDRSPEALERARKRIERLLDRLVRKGRLSQEEADAALARISF---TTDLE 74 (180)
T ss_dssp EEEEES--SHHHHHHHHHHHHTTS--EEEEE-SSHHHHHHHHHHHHHHHHHHHHTTTTTHHHHHHHHHTEEE---ESSGG
T ss_pred CEEEEcC-CHHHHHHHHHHHhCCC--cEEEEECChHHHHhhhhHHHHHHhhhhhhccchhhhhhhhhhhccc---ccCHH
Confidence 7999999 9999999999999998 999999987 11 11111 1100 0 1235554 46786
Q ss_pred hhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCChh-HHHHHHHHHhCCCCCCc
Q 017551 84 NALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTV-PIAAEVFKKAGTYDPKK 161 (369)
Q Consensus 84 ~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t-~i~ae~~~~~~~~~~~k 161 (369)
++. +||+||.+. .+++++.+++..+++++| |+++ ++||-..+.. .++ ... -.|+|
T Consensus 75 ~~~-~adlViEai--------------~E~l~~K~~~~~~l~~~~~~~~i--lasnTSsl~i~~la----~~~--~~p~R 131 (180)
T PF02737_consen 75 EAV-DADLVIEAI--------------PEDLELKQELFAELDEICPPDTI--LASNTSSLSISELA----AAL--SRPER 131 (180)
T ss_dssp GGC-TESEEEE-S---------------SSHHHHHHHHHHHHCCS-TTSE--EEE--SSS-HHHHH----TTS--STGGG
T ss_pred HHh-hhheehhhc--------------cccHHHHHHHHHHHHHHhCCCce--EEecCCCCCHHHHH----hcc--CcCce
Confidence 655 999999995 668999999999999999 5664 4888776533 322 122 23677
Q ss_pred EEEech
Q 017551 162 LLGVTM 167 (369)
Q Consensus 162 viG~t~ 167 (369)
++|+..
T Consensus 132 ~ig~Hf 137 (180)
T PF02737_consen 132 FIGMHF 137 (180)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 888754
No 47
>COG1250 FadB 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism]
Probab=98.82 E-value=1.4e-08 Score=98.08 Aligned_cols=121 Identities=22% Similarity=0.322 Sum_probs=85.0
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--c-hh--HHHH-hhc---cc------CCCeEEEEeCCCChhh
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--T-PG--VTAD-ISH---MD------TGAVVRGFLGQPQLEN 84 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~-~g--~~~d-L~~---~~------~~~~v~~~~~t~dl~~ 84 (369)
.+||+|||| |.||+.+|..++..++ +|+|+|+++ + .+ .... |.. .. ....+...+.++++ .
T Consensus 3 i~kv~ViGa-G~MG~gIA~~~A~~G~--~V~l~D~~~~~~~~~~~~i~~~l~k~~~~g~l~~~~~~~~l~~i~~~~~~-~ 78 (307)
T COG1250 3 IKKVAVIGA-GVMGAGIAAVFALAGY--DVVLKDISPEALERALAYIEKNLEKLVEKGKLTEEEADAALARITPTTDL-A 78 (307)
T ss_pred ccEEEEEcc-cchhHHHHHHHhhcCC--ceEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCChhhHHHHHhhccccCch-h
Confidence 369999999 9999999999999667 999999996 1 11 1111 111 10 01112222235666 4
Q ss_pred hcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCC-hhHHHHHHHHHhCCCCCCcE
Q 017551 85 ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNS-TVPIAAEVFKKAGTYDPKKL 162 (369)
Q Consensus 85 al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~-~t~i~ae~~~~~~~~~~~kv 162 (369)
++++||+||.++ .+|.++.+++..++++++ |+++ ++||-..+ ++.++ +.+ ..|+|+
T Consensus 79 ~l~~~DlVIEAv--------------~E~levK~~vf~~l~~~~~~~aI--lASNTSsl~it~ia-~~~-----~rper~ 136 (307)
T COG1250 79 ALKDADLVIEAV--------------VEDLELKKQVFAELEALAKPDAI--LASNTSSLSITELA-EAL-----KRPERF 136 (307)
T ss_pred HhccCCEEEEec--------------cccHHHHHHHHHHHHhhcCCCcE--EeeccCCCCHHHHH-HHh-----CCchhE
Confidence 899999999996 789999999999999999 6774 49999886 44333 222 346788
Q ss_pred EEec
Q 017551 163 LGVT 166 (369)
Q Consensus 163 iG~t 166 (369)
+|+.
T Consensus 137 iG~H 140 (307)
T COG1250 137 IGLH 140 (307)
T ss_pred EEEe
Confidence 8874
No 48
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.74 E-value=6.3e-08 Score=94.65 Aligned_cols=120 Identities=16% Similarity=0.139 Sum_probs=83.5
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC-c-hh----HHHH---hhcc-----cCCCeEEEEeCCCChhhhc
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-T-PG----VTAD---ISHM-----DTGAVVRGFLGQPQLENAL 86 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~-~-~g----~~~d---L~~~-----~~~~~v~~~~~t~dl~~al 86 (369)
.||+|||+ |.||+.++..++..|+ +|+|||++. . .. +... +... ....+++. ++++++++
T Consensus 8 ~~VaVIGa-G~MG~giA~~~a~aG~--~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~---~~~l~~av 81 (321)
T PRK07066 8 KTFAAIGS-GVIGSGWVARALAHGL--DVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRF---VATIEACV 81 (321)
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhcee---cCCHHHHh
Confidence 58999999 9999999999999998 999999986 1 11 1111 1111 01123343 45788899
Q ss_pred CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEec
Q 017551 87 TGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT 166 (369)
Q Consensus 87 ~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~t 166 (369)
++||+|+.++ .+|..+.+++...+.+++|... |+.||-..+...-++ ... -.|.|++|+.
T Consensus 82 ~~aDlViEav--------------pE~l~vK~~lf~~l~~~~~~~a-IlaSnTS~l~~s~la---~~~--~~p~R~~g~H 141 (321)
T PRK07066 82 ADADFIQESA--------------PEREALKLELHERISRAAKPDA-IIASSTSGLLPTDFY---ARA--THPERCVVGH 141 (321)
T ss_pred cCCCEEEECC--------------cCCHHHHHHHHHHHHHhCCCCe-EEEECCCccCHHHHH---Hhc--CCcccEEEEe
Confidence 9999999985 6678899999999999996542 668888866432222 121 2356777764
No 49
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.70 E-value=1.4e-07 Score=90.99 Aligned_cols=122 Identities=18% Similarity=0.251 Sum_probs=83.1
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc---hh--HHHH----hhccc---------CCCeEEEEeCCCCh
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PG--VTAD----ISHMD---------TGAVVRGFLGQPQL 82 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~---~g--~~~d----L~~~~---------~~~~v~~~~~t~dl 82 (369)
.||+|||+ |.+|..+|..++..|+ +|+|||++.. .+ ...+ +.+.. ...+++. ++|+
T Consensus 6 ~~V~ViGa-G~mG~~iA~~~a~~G~--~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~l~~---~~~~ 79 (286)
T PRK07819 6 QRVGVVGA-GQMGAGIAEVCARAGV--DVLVFETTEELATAGRNRIEKSLERAVSRGKLTERERDAALARLRF---TTDL 79 (286)
T ss_pred cEEEEEcc-cHHHHHHHHHHHhCCC--EEEEEECCHHHHHHHHHHHHHHHHHHHhcccCChhhHHHHHhCeEe---eCCH
Confidence 49999999 9999999999999998 9999999871 11 1111 11110 0123443 4677
Q ss_pred hhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCChhHHHHHHHHHhCCCCCCc
Q 017551 83 ENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKK 161 (369)
Q Consensus 83 ~~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~k 161 (369)
+++++||+||.+. .++.++.+++...++++| +.. .|++||-..+.....+ ... -.+.|
T Consensus 80 -~~~~~~d~ViEav--------------~E~~~~K~~l~~~l~~~~~~~~-~il~snTS~~~~~~la----~~~-~~~~r 138 (286)
T PRK07819 80 -GDFADRQLVIEAV--------------VEDEAVKTEIFAELDKVVTDPD-AVLASNTSSIPIMKLA----AAT-KRPGR 138 (286)
T ss_pred -HHhCCCCEEEEec--------------ccCHHHHHHHHHHHHHhhCCCC-cEEEECCCCCCHHHHH----hhc-CCCcc
Confidence 6799999999995 678899999999999997 433 2447777765433222 222 23567
Q ss_pred EEEechhc
Q 017551 162 LLGVTMLD 169 (369)
Q Consensus 162 viG~t~Ld 169 (369)
++|+...+
T Consensus 139 ~~g~hf~~ 146 (286)
T PRK07819 139 VLGLHFFN 146 (286)
T ss_pred EEEEecCC
Confidence 88875433
No 50
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=98.65 E-value=6.8e-08 Score=87.26 Aligned_cols=133 Identities=19% Similarity=0.273 Sum_probs=80.9
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch--hHH-----------HHhhc-ccCCCeEEEEeCCCChhhhc
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVT-----------ADISH-MDTGAVVRGFLGQPQLENAL 86 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~--g~~-----------~dL~~-~~~~~~v~~~~~t~dl~~al 86 (369)
|||+|||. |++|.++|..|+..|+ +++.+|+++.+ ... .++.. .....++.. ++|.++++
T Consensus 1 M~I~ViGl-GyvGl~~A~~lA~~G~--~V~g~D~~~~~v~~l~~g~~p~~E~~l~~ll~~~~~~~~l~~---t~~~~~ai 74 (185)
T PF03721_consen 1 MKIAVIGL-GYVGLPLAAALAEKGH--QVIGVDIDEEKVEALNNGELPIYEPGLDELLKENVSAGRLRA---TTDIEEAI 74 (185)
T ss_dssp -EEEEE---STTHHHHHHHHHHTTS--EEEEE-S-HHHHHHHHTTSSSS-CTTHHHHHHHHHHTTSEEE---ESEHHHHH
T ss_pred CEEEEECC-CcchHHHHHHHHhCCC--EEEEEeCChHHHHHHhhccccccccchhhhhccccccccchh---hhhhhhhh
Confidence 79999999 9999999999999998 99999999721 111 11111 111356665 36788889
Q ss_pred CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEe-cCCCCChhHHHHHHHHHhCCCCCCcEEE
Q 017551 87 TGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLI-SNPVNSTVPIAAEVFKKAGTYDPKKLLG 164 (369)
Q Consensus 87 ~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~-tNPv~~~t~i~ae~~~~~~~~~~~kviG 164 (369)
++||++|++.+.|..++.+ -+...+.+.++.|.++. ++.+|++= |-|.+.+-.++..++.+.++.. .=|+
T Consensus 75 ~~adv~~I~VpTP~~~~~~------~Dls~v~~a~~~i~~~l~~~~lvV~~STvppGtt~~~~~~ile~~~~~~--~~f~ 146 (185)
T PF03721_consen 75 KDADVVFICVPTPSDEDGS------PDLSYVESAIESIAPVLRPGDLVVIESTVPPGTTEELLKPILEKRSGKK--EDFH 146 (185)
T ss_dssp HH-SEEEE----EBETTTS------BETHHHHHHHHHHHHHHCSCEEEEESSSSSTTHHHHHHHHHHHHHCCTT--TCEE
T ss_pred hccceEEEecCCCccccCC------ccHHHHHHHHHHHHHHHhhcceEEEccEEEEeeehHhhhhhhhhhcccc--cCCe
Confidence 9999999999888766421 23344556666666654 44544433 6888888766666677766543 3455
Q ss_pred ech
Q 017551 165 VTM 167 (369)
Q Consensus 165 ~t~ 167 (369)
++.
T Consensus 147 la~ 149 (185)
T PF03721_consen 147 LAY 149 (185)
T ss_dssp EEE
T ss_pred EEE
Confidence 544
No 51
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.56 E-value=6.4e-07 Score=86.16 Aligned_cols=120 Identities=20% Similarity=0.300 Sum_probs=78.3
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc-hhHHHH----hhc-----ccC---------CCeEEEEeCCCC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTAD----ISH-----MDT---------GAVVRGFLGQPQ 81 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~-~g~~~d----L~~-----~~~---------~~~v~~~~~t~d 81 (369)
+||+|||+ |.+|+.++..++..+. +|+++|+++. ...+.+ +.+ ... ..+++. ++|
T Consensus 4 ~kIaViGa-G~mG~~iA~~la~~G~--~V~l~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~---~~d 77 (287)
T PRK08293 4 KNVTVAGA-GVLGSQIAFQTAFHGF--DVTIYDISDEALEKAKERIAKLADRYVRDLEATKEAPAEAALNRITL---TTD 77 (287)
T ss_pred cEEEEECC-CHHHHHHHHHHHhcCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhHHHHHcCeEE---eCC
Confidence 59999999 9999999999999887 9999999861 111111 110 000 123443 467
Q ss_pred hhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCc
Q 017551 82 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKK 161 (369)
Q Consensus 82 l~~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~k 161 (369)
+++++++||+||++. ..+.++.+++.+++.+++++.. ++++|.......-+ ... .. .+.|
T Consensus 78 ~~~a~~~aDlVieav--------------pe~~~~k~~~~~~l~~~~~~~~-ii~sntSt~~~~~~---~~~-~~-~~~r 137 (287)
T PRK08293 78 LAEAVKDADLVIEAV--------------PEDPEIKGDFYEELAKVAPEKT-IFATNSSTLLPSQF---AEA-TG-RPEK 137 (287)
T ss_pred HHHHhcCCCEEEEec--------------cCCHHHHHHHHHHHHhhCCCCC-EEEECcccCCHHHH---Hhh-cC-Cccc
Confidence 888899999999995 3456778888888988886442 33566665432211 122 11 2557
Q ss_pred EEEec
Q 017551 162 LLGVT 166 (369)
Q Consensus 162 viG~t 166 (369)
++|+.
T Consensus 138 ~vg~H 142 (287)
T PRK08293 138 FLALH 142 (287)
T ss_pred EEEEc
Confidence 77764
No 52
>PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=98.56 E-value=3.3e-07 Score=98.72 Aligned_cols=118 Identities=17% Similarity=0.211 Sum_probs=85.2
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC-c--hhH--HHH----hhccc---------CCCeEEEEeCCCCh
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-T--PGV--TAD----ISHMD---------TGAVVRGFLGQPQL 82 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~-~--~g~--~~d----L~~~~---------~~~~v~~~~~t~dl 82 (369)
.||+|||| |.+|..++..++..|+ +|+|+|+++ . .+. +.+ +.... ...+++. ++|+
T Consensus 314 ~~v~ViGa-G~mG~gIA~~~a~~G~--~V~l~d~~~~~l~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~i~~---~~~~ 387 (715)
T PRK11730 314 KQAAVLGA-GIMGGGIAYQSASKGV--PVIMKDINQKALDLGMTEAAKLLNKQVERGKIDGAKMAGVLSSIRP---TLDY 387 (715)
T ss_pred ceEEEECC-chhHHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhHHHHHhCeEE---eCCH
Confidence 58999999 9999999999999998 999999987 1 111 111 11100 0134543 4677
Q ss_pred hhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCh-hHHHHHHHHHhCCCCCCc
Q 017551 83 ENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNST-VPIAAEVFKKAGTYDPKK 161 (369)
Q Consensus 83 ~~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~-t~i~ae~~~~~~~~~~~k 161 (369)
+++++||+||.+. .+++++.+++..+++++||.. .|++||-..+- +.++ + .. -.|.|
T Consensus 388 -~~~~~aDlViEav--------------~E~l~~K~~vf~~l~~~~~~~-~ilasNTSsl~i~~la-~---~~--~~p~r 445 (715)
T PRK11730 388 -AGFERVDVVVEAV--------------VENPKVKAAVLAEVEQKVRED-TILASNTSTISISLLA-K---AL--KRPEN 445 (715)
T ss_pred -HHhcCCCEEEecc--------------cCcHHHHHHHHHHHHhhCCCC-cEEEEcCCCCCHHHHH-h---hc--CCCcc
Confidence 6799999999995 678999999999999999644 34599988864 4333 2 22 23678
Q ss_pred EEEec
Q 017551 162 LLGVT 166 (369)
Q Consensus 162 viG~t 166 (369)
++|+.
T Consensus 446 ~~g~H 450 (715)
T PRK11730 446 FCGMH 450 (715)
T ss_pred EEEEe
Confidence 99874
No 53
>TIGR02437 FadB fatty oxidation complex, alpha subunit FadB. Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Activities include: enoyl-CoA hydratase (EC 4.2.1.17), dodecenoyl-CoA delta-isomerase activity (EC 5.3.3.8), 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadB. This model excludes the FadJ family represented by SP:P77399.
Probab=98.55 E-value=3.7e-07 Score=98.27 Aligned_cols=119 Identities=17% Similarity=0.194 Sum_probs=85.5
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC-c--hhH--HHHh----hcc-c--------CCCeEEEEeCCCC
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-T--PGV--TADI----SHM-D--------TGAVVRGFLGQPQ 81 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~-~--~g~--~~dL----~~~-~--------~~~~v~~~~~t~d 81 (369)
-.||+|||| |.+|..+|..++..|+ +|+|+|++. . .+. +.++ .+. . ...+++. ++|
T Consensus 313 i~~v~ViGa-G~mG~gIA~~~a~~G~--~V~l~d~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~---~~~ 386 (714)
T TIGR02437 313 VKQAAVLGA-GIMGGGIAYQSASKGT--PIVMKDINQHSLDLGLTEAAKLLNKQVERGRITPAKMAGVLNGITP---TLS 386 (714)
T ss_pred cceEEEECC-chHHHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhHHHHHhCeEE---eCC
Confidence 369999999 9999999999999998 999999987 1 111 1111 110 0 0134443 467
Q ss_pred hhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCh-hHHHHHHHHHhCCCCCC
Q 017551 82 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNST-VPIAAEVFKKAGTYDPK 160 (369)
Q Consensus 82 l~~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~-t~i~ae~~~~~~~~~~~ 160 (369)
+ +++++||+||.++ .+++++.+++..+++++||.. .|++||-..+- +.++ + .. -.|.
T Consensus 387 ~-~~~~~aDlViEav--------------~E~l~~K~~vf~~l~~~~~~~-~ilasnTS~l~i~~ia-~----~~-~~p~ 444 (714)
T TIGR02437 387 Y-AGFDNVDIVVEAV--------------VENPKVKAAVLAEVEQHVRED-AILASNTSTISISLLA-K----AL-KRPE 444 (714)
T ss_pred H-HHhcCCCEEEEcC--------------cccHHHHHHHHHHHHhhCCCC-cEEEECCCCCCHHHHH-h----hc-CCcc
Confidence 6 6799999999995 678999999999999999543 24599988864 3332 2 22 2467
Q ss_pred cEEEec
Q 017551 161 KLLGVT 166 (369)
Q Consensus 161 kviG~t 166 (369)
|++|+.
T Consensus 445 r~ig~H 450 (714)
T TIGR02437 445 NFCGMH 450 (714)
T ss_pred cEEEEe
Confidence 899985
No 54
>TIGR02441 fa_ox_alpha_mit fatty acid oxidation complex, alpha subunit, mitochondrial. Members represent alpha subunit of mitochondrial multifunctional fatty acid degradation enzyme complex. Subunit activities include: enoyl-CoA hydratase (EC 4.2.1.17) & 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35). Some characterization in human, pig, and rat. The beta subunit has activity: acetyl-CoA C-acyltransferase (EC 2.3.1.16).
Probab=98.54 E-value=2.6e-07 Score=99.75 Aligned_cols=119 Identities=18% Similarity=0.188 Sum_probs=85.0
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC---chhH--HHHhhcc-----c--------CCCeEEEEeCCCCh
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGV--TADISHM-----D--------TGAVVRGFLGQPQL 82 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~---~~g~--~~dL~~~-----~--------~~~~v~~~~~t~dl 82 (369)
.||+|||| |.+|+.++..++..|+ +|+|+|+++ ..+. +.+..+. . ...+++. ++|+
T Consensus 336 ~~v~ViGa-G~MG~gIA~~~a~~G~--~V~l~d~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~---~~~~ 409 (737)
T TIGR02441 336 KTLAVLGA-GLMGAGIAQVSVDKGL--KTVLKDATPAGLDRGQQQVFKGLNKKVKRKKITSLERDSILSNLTP---TLDY 409 (737)
T ss_pred cEEEEECC-CHhHHHHHHHHHhCCC--cEEEecCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEE---eCCH
Confidence 68999999 9999999999999998 999999987 1111 1111110 0 0134543 4677
Q ss_pred hhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcE
Q 017551 83 ENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKL 162 (369)
Q Consensus 83 ~~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kv 162 (369)
+++++||+||.++ .+|+++.+++..+++++||.. .|++||-..+-..-+++ .. -.|.|+
T Consensus 410 -~~~~~aDlViEAv--------------~E~l~~K~~vf~~l~~~~~~~-~ilasNTSsl~i~~la~----~~-~~p~r~ 468 (737)
T TIGR02441 410 -SGFKNADMVIEAV--------------FEDLSLKHKVIKEVEAVVPPH-CIIASNTSALPIKDIAA----VS-SRPEKV 468 (737)
T ss_pred -HHhccCCeehhhc--------------cccHHHHHHHHHHHHhhCCCC-cEEEEcCCCCCHHHHHh----hc-CCccce
Confidence 6899999999995 778999999999999999544 24589988864332222 22 236788
Q ss_pred EEec
Q 017551 163 LGVT 166 (369)
Q Consensus 163 iG~t 166 (369)
+|+.
T Consensus 469 ig~H 472 (737)
T TIGR02441 469 IGMH 472 (737)
T ss_pred EEEe
Confidence 8873
No 55
>TIGR02440 FadJ fatty oxidation complex, alpha subunit FadJ. Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Plays a minor role in aerobic beta-oxidation of fatty acids. FadJI complex is necessary for anaerobic growth on short-chain acids with nitrate as an electron acceptor. Activities include: enoyl-CoA hydratase (EC 4.2.1.17),3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadJ (aka YfcX). This model excludes the FadB of TIGR02437 equivalog.
Probab=98.51 E-value=5.7e-07 Score=96.69 Aligned_cols=120 Identities=18% Similarity=0.272 Sum_probs=84.3
Q ss_pred CCEEEEEcCCCccHHHHHHHHHh-CCCCcEEEEEeCCC-c--hhH--HHH-hhcc----c--------CCCeEEEEeCCC
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKI-NPLVSVLHLYDVVN-T--PGV--TAD-ISHM----D--------TGAVVRGFLGQP 80 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~-~~~~~el~L~D~~~-~--~g~--~~d-L~~~----~--------~~~~v~~~~~t~ 80 (369)
..||+|||| |.+|+.++..++. .|+ +|+|+|+++ . .+. +.+ |... . ...+++. ++
T Consensus 304 i~~v~ViGa-G~mG~~iA~~~a~~~G~--~V~l~d~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~---~~ 377 (699)
T TIGR02440 304 IKKVGILGG-GLMGGGIASVTATKAGI--PVRIKDINPQGINNALKYAWKLLDKGVKRRHMTPAERDNQMALITG---TT 377 (699)
T ss_pred ccEEEEECC-cHHHHHHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHcCeEE---eC
Confidence 369999999 9999999999884 788 999999987 1 111 111 1110 0 0134443 46
Q ss_pred ChhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCC
Q 017551 81 QLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPK 160 (369)
Q Consensus 81 dl~~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~ 160 (369)
|+ ++++|||+||.++ .+++++.+++..+++++|+.. .|++||-..+...-+++.+ -.|.
T Consensus 378 ~~-~~~~~adlViEav--------------~E~l~~K~~v~~~l~~~~~~~-~ilasnTS~l~i~~la~~~-----~~p~ 436 (699)
T TIGR02440 378 DY-RGFKDVDIVIEAV--------------FEDLALKHQMVKDIEQECAAH-TIFASNTSSLPIGQIAAAA-----SRPE 436 (699)
T ss_pred Ch-HHhccCCEEEEec--------------cccHHHHHHHHHHHHhhCCCC-cEEEeCCCCCCHHHHHHhc-----CCcc
Confidence 77 6899999999995 678999999999999999644 3458998886433223322 2467
Q ss_pred cEEEec
Q 017551 161 KLLGVT 166 (369)
Q Consensus 161 kviG~t 166 (369)
|++|+.
T Consensus 437 r~~g~H 442 (699)
T TIGR02440 437 NVIGLH 442 (699)
T ss_pred cEEEEe
Confidence 888874
No 56
>PRK11154 fadJ multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=98.50 E-value=6.9e-07 Score=96.24 Aligned_cols=119 Identities=18% Similarity=0.295 Sum_probs=84.7
Q ss_pred CCEEEEEcCCCccHHHHHHHHH-hCCCCcEEEEEeCCC-c--hh--HHHHhh-----ccc--------CCCeEEEEeCCC
Q 017551 20 GFKVAILGAAGGIGQPLAMLMK-INPLVSVLHLYDVVN-T--PG--VTADIS-----HMD--------TGAVVRGFLGQP 80 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~-~~~~~~el~L~D~~~-~--~g--~~~dL~-----~~~--------~~~~v~~~~~t~ 80 (369)
-.||+|||| |.+|..+|..++ ..|+ +|+|+|++. . .+ .+.++. +.. ...+++. ++
T Consensus 309 i~~v~ViGa-G~mG~giA~~~a~~~G~--~V~l~d~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~---~~ 382 (708)
T PRK11154 309 VNKVGVLGG-GLMGGGIAYVTATKAGL--PVRIKDINPQGINHALKYSWDLLDKKVKRRHLKPSERDKQMALISG---TT 382 (708)
T ss_pred ccEEEEECC-chhhHHHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhcEEE---eC
Confidence 369999999 999999999998 7788 999999986 1 11 111111 100 1134554 46
Q ss_pred ChhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCChhHHHHHHHHHhCCCCC
Q 017551 81 QLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDP 159 (369)
Q Consensus 81 dl~~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~ 159 (369)
|+ ++++|||+||.+. .+|.++.+++..+++++| |++ |++||-..+...-+++.+ -.|
T Consensus 383 ~~-~~~~~aDlViEav--------------~E~~~~K~~v~~~le~~~~~~~--ilasnTS~l~i~~la~~~-----~~p 440 (708)
T PRK11154 383 DY-RGFKHADVVIEAV--------------FEDLALKQQMVAEVEQNCAPHT--IFASNTSSLPIGQIAAAA-----ARP 440 (708)
T ss_pred Ch-HHhccCCEEeecc--------------cccHHHHHHHHHHHHhhCCCCc--EEEECCCCCCHHHHHHhc-----Ccc
Confidence 76 6899999999995 778999999999999999 565 448998886443222222 236
Q ss_pred CcEEEec
Q 017551 160 KKLLGVT 166 (369)
Q Consensus 160 ~kviG~t 166 (369)
.|++|+.
T Consensus 441 ~r~ig~H 447 (708)
T PRK11154 441 EQVIGLH 447 (708)
T ss_pred cceEEEe
Confidence 7888874
No 57
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=98.48 E-value=3e-06 Score=78.37 Aligned_cols=128 Identities=18% Similarity=0.106 Sum_probs=76.6
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccC--CCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDT--GAVVRGFLGQPQLENALTGMDLVIIPA 96 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~--~~~v~~~~~t~dl~~al~~ADiVii~a 96 (369)
|||+|||++|.+|++++..|...+. +|.++|.+.. .....++.+... ....+... ++..++++++|+||++.
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~G~--~V~v~~r~~~~~~~l~~~~~~~~~~~g~~~~~~~--~~~~ea~~~aDvVilav 76 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKAGN--KIIIGSRDLEKAEEAAAKALEELGHGGSDIKVTG--ADNAEAAKRADVVILAV 76 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCC--EEEEEEcCHHHHHHHHHHHHhhccccCCCceEEE--eChHHHHhcCCEEEEEC
Confidence 6999998449999999999998886 9999998762 222222222110 11111111 23367899999999985
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCh-----------hHHHHHHHHHhCCCCC-CcEEE
Q 017551 97 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNST-----------VPIAAEVFKKAGTYDP-KKLLG 164 (369)
Q Consensus 97 g~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~-----------t~i~ae~~~~~~~~~~-~kviG 164 (369)
. ...+.++++.+....++.++|-++||.+.- ..-.+|.+++. +|+ .||+.
T Consensus 77 p----------------~~~~~~~l~~l~~~l~~~vvI~~~ngi~~~~~~~~~~~~~~~~s~~e~l~~~--~p~~~~VVk 138 (219)
T TIGR01915 77 P----------------WDHVLKTLESLRDELSGKLVISPVVPLASDGGKGARYLPPEEGSAAEQAAAL--LPETSRVVA 138 (219)
T ss_pred C----------------HHHHHHHHHHHHHhccCCEEEEeccCceecCCCCceecCCCCCcHHHHHHHh--CCCCCeEee
Confidence 1 111233334444333446788889998751 01113445554 666 67776
Q ss_pred e-chhcH
Q 017551 165 V-TMLDV 170 (369)
Q Consensus 165 ~-t~Ld~ 170 (369)
. .++..
T Consensus 139 a~~~~~a 145 (219)
T TIGR01915 139 AFHNLSA 145 (219)
T ss_pred ccccCCH
Confidence 6 55553
No 58
>KOG2304 consensus 3-hydroxyacyl-CoA dehydrogenase [Lipid transport and metabolism]
Probab=98.47 E-value=1.8e-07 Score=85.72 Aligned_cols=123 Identities=24% Similarity=0.326 Sum_probs=90.9
Q ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC------chhHHHHhhccc-----------------CCCeEE
Q 017551 18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN------TPGVTADISHMD-----------------TGAVVR 74 (369)
Q Consensus 18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~------~~g~~~dL~~~~-----------------~~~~v~ 74 (369)
.+...|+|+|| |.+|+.+|...++.++ .|.|+|.++ .+++...+.+.. +..+++
T Consensus 9 ~~~~~V~ivGa-G~MGSGIAQv~a~sg~--~V~l~d~~~~aL~~A~~~I~~sl~rvakKk~~~~~~~~~e~v~~~l~ri~ 85 (298)
T KOG2304|consen 9 AEIKNVAIVGA-GQMGSGIAQVAATSGL--NVWLVDANEDALSRATKAISSSLKRVAKKKKADDPVALEEFVDDTLDRIK 85 (298)
T ss_pred ccccceEEEcc-cccchhHHHHHHhcCC--ceEEecCCHHHHHHHHHHHHHHHHHHHhhcccCChhhHHHHHHHHHHHHH
Confidence 44569999999 9999999999999999 999999997 123333232221 011223
Q ss_pred EEeCCCChhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCC-hhHHHHHHHHH
Q 017551 75 GFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNS-TVPIAAEVFKK 153 (369)
Q Consensus 75 ~~~~t~dl~~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~-~t~i~ae~~~~ 153 (369)
. ++|...+++|||+||.++ -+|+.+.+++.+++++.|+.. -|++||-..+ ++.++ -++
T Consensus 86 ~---~tnv~~~v~dadliiEAi--------------vEn~diK~~lF~~l~~~ak~~-~il~tNTSSl~lt~ia-~~~-- 144 (298)
T KOG2304|consen 86 T---STNVSDAVSDADLIIEAI--------------VENLDIKRKLFKDLDKIAKSS-TILATNTSSLSLTDIA-SAT-- 144 (298)
T ss_pred H---cCCHHHhhhhhHHHHHHH--------------HHhHHHHHHHHHHHHhhcccc-eEEeecccceeHHHHH-hhc--
Confidence 2 468889999999999884 899999999999999999755 3458998876 55443 111
Q ss_pred hCCCCCCcEEEech
Q 017551 154 AGTYDPKKLLGVTM 167 (369)
Q Consensus 154 ~~~~~~~kviG~t~ 167 (369)
-+|.|+.|+..
T Consensus 145 ---~~~srf~GlHF 155 (298)
T KOG2304|consen 145 ---QRPSRFAGLHF 155 (298)
T ss_pred ---cChhhhceeec
Confidence 34679999964
No 59
>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC. This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring. The sequences included in this model are all found in aparrent operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN. Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. This enzyme has domains which are members of the pfam02737 and pfam00725 families.
Probab=98.40 E-value=2.3e-06 Score=88.71 Aligned_cols=124 Identities=21% Similarity=0.318 Sum_probs=82.9
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc---hhH--HH----Hhhccc---------CCCeEEEEeCCC
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGV--TA----DISHMD---------TGAVVRGFLGQP 80 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~---~g~--~~----dL~~~~---------~~~~v~~~~~t~ 80 (369)
+..||+|||+ |.+|+.+|..++..|+ +|++||++.. .+. .. .+.... ...+++. ++
T Consensus 4 ~~~kV~VIGa-G~MG~gIA~~la~aG~--~V~l~d~~~e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~---~~ 77 (503)
T TIGR02279 4 NVVTVAVIGA-GAMGAGIAQVAASAGH--QVLLYDIRAEALARAIAGIEARLNSLVTKGKLTAEECERTLKRLIP---VT 77 (503)
T ss_pred CccEEEEECc-CHHHHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHhccEE---eC
Confidence 3468999999 9999999999999998 9999999871 111 11 111110 0123443 45
Q ss_pred ChhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCC
Q 017551 81 QLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPK 160 (369)
Q Consensus 81 dl~~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~ 160 (369)
++ +++++||+||.+. .++..+.+.+...+.+++|.. .|++||-..+-..-+++.+ -.|.
T Consensus 78 ~~-~~l~~aDlVIEav--------------~E~~~vK~~vf~~l~~~~~~~-~IlasnTStl~i~~iA~~~-----~~p~ 136 (503)
T TIGR02279 78 DL-HALADAGLVIEAI--------------VENLEVKKALFAQLEELCPAD-TIIASNTSSLSITAIAAGL-----ARPE 136 (503)
T ss_pred CH-HHhCCCCEEEEcC--------------cCcHHHHHHHHHHHHhhCCCC-eEEEECCCCCCHHHHHHhc-----Cccc
Confidence 66 5789999999985 567788888888999999655 3468888776443222222 1245
Q ss_pred cEEEechhc
Q 017551 161 KLLGVTMLD 169 (369)
Q Consensus 161 kviG~t~Ld 169 (369)
|++|+..++
T Consensus 137 r~~G~HFf~ 145 (503)
T TIGR02279 137 RVAGLHFFN 145 (503)
T ss_pred ceEEEeccC
Confidence 677765443
No 60
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=98.39 E-value=1.2e-06 Score=76.99 Aligned_cols=93 Identities=24% Similarity=0.326 Sum_probs=63.2
Q ss_pred EEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhccc--------CCCeEEEEeCCCChhhhcCCCcEEE
Q 017551 22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD--------TGAVVRGFLGQPQLENALTGMDLVI 93 (369)
Q Consensus 22 KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~--------~~~~v~~~~~t~dl~~al~~ADiVi 93 (369)
||+|+|| |..|+++|..|..++. +|.||+.++.....+.-.|.. ....+.. ++|+++++++||+||
T Consensus 1 KI~ViGa-G~~G~AlA~~la~~g~--~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~---t~dl~~a~~~ad~Ii 74 (157)
T PF01210_consen 1 KIAVIGA-GNWGTALAALLADNGH--EVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKA---TTDLEEALEDADIII 74 (157)
T ss_dssp EEEEESS-SHHHHHHHHHHHHCTE--EEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEE---ESSHHHHHTT-SEEE
T ss_pred CEEEECc-CHHHHHHHHHHHHcCC--EEEEEeccHHHHHHHHHhCCCCCCCCCcccCccccc---ccCHHHHhCcccEEE
Confidence 8999999 9999999999999997 999999986222222222221 1124443 578999999999999
Q ss_pred EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCC-eEEEEe
Q 017551 94 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPN-ATVNLI 136 (369)
Q Consensus 94 i~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~-a~viv~ 136 (369)
++. | ....+++++++..+-++ ..++++
T Consensus 75 iav--P--------------s~~~~~~~~~l~~~l~~~~~ii~~ 102 (157)
T PF01210_consen 75 IAV--P--------------SQAHREVLEQLAPYLKKGQIIISA 102 (157)
T ss_dssp E-S-----------------GGGHHHHHHHHTTTSHTT-EEEET
T ss_pred ecc--c--------------HHHHHHHHHHHhhccCCCCEEEEe
Confidence 983 2 23366788888888744 444443
No 61
>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.38 E-value=3.9e-06 Score=80.44 Aligned_cols=118 Identities=21% Similarity=0.368 Sum_probs=77.9
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc---hhH--H----HHhhccc---------CCCeEEEEeCCCCh
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGV--T----ADISHMD---------TGAVVRGFLGQPQL 82 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~---~g~--~----~dL~~~~---------~~~~v~~~~~t~dl 82 (369)
.||+|||+ |.||..++..++..+. +|+++|++.. .+. . ..+.... ...+++. ++|+
T Consensus 4 ~kI~VIG~-G~mG~~ia~~la~~g~--~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~l~~---~~~~ 77 (282)
T PRK05808 4 QKIGVIGA-GTMGNGIAQVCAVAGY--DVVMVDISDAAVDRGLATITKSLDRLVKKGKMTEADKEAALARITG---TTDL 77 (282)
T ss_pred cEEEEEcc-CHHHHHHHHHHHHCCC--ceEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEE---eCCH
Confidence 48999999 9999999999999987 9999999872 111 0 0111110 0123443 3566
Q ss_pred hhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCC-CeEEEEecCCCCChhHHHHHHHHHhCCCCCCc
Q 017551 83 ENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNSTVPIAAEVFKKAGTYDPKK 161 (369)
Q Consensus 83 ~~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~k 161 (369)
+++++||+||+++ ..+..+.+++...+.++++ ++++ +||-.++-...++ ...+ .+.|
T Consensus 78 -~~~~~aDlVi~av--------------~e~~~~k~~~~~~l~~~~~~~~il--~s~ts~~~~~~la----~~~~-~~~r 135 (282)
T PRK05808 78 -DDLKDADLVIEAA--------------TENMDLKKKIFAQLDEIAKPEAIL--ATNTSSLSITELA----AATK-RPDK 135 (282)
T ss_pred -HHhccCCeeeecc--------------cccHHHHHHHHHHHHhhCCCCcEE--EECCCCCCHHHHH----HhhC-CCcc
Confidence 5689999999995 4456777888899999885 5533 6777665433222 2212 2457
Q ss_pred EEEec
Q 017551 162 LLGVT 166 (369)
Q Consensus 162 viG~t 166 (369)
++|+.
T Consensus 136 ~ig~h 140 (282)
T PRK05808 136 VIGMH 140 (282)
T ss_pred eEEee
Confidence 77764
No 62
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=98.35 E-value=5.2e-06 Score=79.96 Aligned_cols=119 Identities=13% Similarity=0.231 Sum_probs=76.8
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc-hhHHHH--------hh---cccC---------CCeEEEEeCC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTAD--------IS---HMDT---------GAVVRGFLGQ 79 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~-~g~~~d--------L~---~~~~---------~~~v~~~~~t 79 (369)
.||+|||+ |.+|+.++..++..+. +|+++|+++. ...+.+ +. +... ..++.. +
T Consensus 4 ~~I~ViGa-G~mG~~iA~~la~~G~--~V~l~d~~~~~l~~~~~~i~~~~~~l~~~~~~g~~~~~~~~~~~~~i~~---~ 77 (291)
T PRK06035 4 KVIGVVGS-GVMGQGIAQVFARTGY--DVTIVDVSEEILKNAMELIESGPYGLRNLVEKGKMSEDEAKAIMARIRT---S 77 (291)
T ss_pred cEEEEECc-cHHHHHHHHHHHhcCC--eEEEEeCCHHHHHHHHHHHHhhhhhHHHHHHcCCCCHHHHHHHHhCcEe---e
Confidence 58999999 9999999999999988 9999999871 111111 11 1000 112332 3
Q ss_pred CChhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCC-CeEEEEecCCCCChhHHHHHHHHHhCCCC
Q 017551 80 PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNSTVPIAAEVFKKAGTYD 158 (369)
Q Consensus 80 ~dl~~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNPv~~~t~i~ae~~~~~~~~~ 158 (369)
+++ +++++||+||++. ..+..+.+++.++++++++ ++++ +||-..+...-++ ... -.
T Consensus 78 ~~~-~~~~~aDlVieav--------------~e~~~~k~~~~~~l~~~~~~~~il--~S~tsg~~~~~la---~~~--~~ 135 (291)
T PRK06035 78 TSY-ESLSDADFIVEAV--------------PEKLDLKRKVFAELERNVSPETII--ASNTSGIMIAEIA---TAL--ER 135 (291)
T ss_pred CCH-HHhCCCCEEEEcC--------------cCcHHHHHHHHHHHHhhCCCCeEE--EEcCCCCCHHHHH---hhc--CC
Confidence 566 6799999999995 3345667788888888875 4543 5776655432222 121 13
Q ss_pred CCcEEEech
Q 017551 159 PKKLLGVTM 167 (369)
Q Consensus 159 ~~kviG~t~ 167 (369)
+.|++|+..
T Consensus 136 ~~r~ig~hf 144 (291)
T PRK06035 136 KDRFIGMHW 144 (291)
T ss_pred cccEEEEec
Confidence 567888754
No 63
>PLN02353 probable UDP-glucose 6-dehydrogenase
Probab=98.32 E-value=7.8e-06 Score=84.03 Aligned_cols=122 Identities=15% Similarity=0.172 Sum_probs=79.6
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHH-------------HHhhcccCCCeEEEEeCCCChhhhc
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVT-------------ADISHMDTGAVVRGFLGQPQLENAL 86 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~-------------~dL~~~~~~~~v~~~~~t~dl~~al 86 (369)
.|||+|||+ |.+|.+++..|+..+..-+|+.+|+++.+-.. .+|.......+++. ++|+.+++
T Consensus 1 ~m~I~ViG~-GyvGl~~A~~lA~~g~g~~V~gvD~~~~~v~~l~~g~~~~~e~gl~ell~~~~~~~l~~---t~~~~~~i 76 (473)
T PLN02353 1 MVKICCIGA-GYVGGPTMAVIALKCPDIEVVVVDISVPRIDAWNSDQLPIYEPGLDEVVKQCRGKNLFF---STDVEKHV 76 (473)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCCeEEEEECCHHHHHHHHcCCCccCCCCHHHHHHHhhcCCEEE---EcCHHHHH
Confidence 479999999 99999999999998644489999998722111 01110001112443 46777899
Q ss_pred CCCcEEEEcCCCCCCCCC-CHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEe--cCCCCChhHHH
Q 017551 87 TGMDLVIIPAGVPRKPGM-TRDDLFNINAGIVRTLCEGIAKCCPNATVNLI--SNPVNSTVPIA 147 (369)
Q Consensus 87 ~~ADiVii~ag~p~k~g~-~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~--tNPv~~~t~i~ 147 (369)
++||++|++.+.|.+..- .. + -.-++..+.+.++.|.++.++..+++. |.|.++.-.+.
T Consensus 77 ~~advi~I~V~TP~~~~g~~~-~-~~~Dls~v~~a~~~i~~~l~~~~lVv~~STvp~Gtt~~~~ 138 (473)
T PLN02353 77 AEADIVFVSVNTPTKTRGLGA-G-KAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIE 138 (473)
T ss_pred hcCCEEEEEeCCCCCCCCCcC-C-CCCcHHHHHHHHHHHHhhCCCCcEEEEeCCCCCChHHHHH
Confidence 999999999999875421 00 0 012345567777888877755544443 78888765554
No 64
>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated
Probab=98.30 E-value=4.7e-06 Score=86.49 Aligned_cols=122 Identities=20% Similarity=0.267 Sum_probs=80.2
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc---hh--HHHH----hhccc---------CCCeEEEEeCCCC
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PG--VTAD----ISHMD---------TGAVVRGFLGQPQ 81 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~---~g--~~~d----L~~~~---------~~~~v~~~~~t~d 81 (369)
..||+|||+ |.+|+.++..++..|+ +|+++|++.. .+ .+.+ +.... ...+++. +++
T Consensus 7 i~~V~VIGa-G~MG~gIA~~la~aG~--~V~l~D~~~e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~---~~~ 80 (507)
T PRK08268 7 IATVAVIGA-GAMGAGIAQVAAQAGH--TVLLYDARAGAAAAARDGIAARLAKLVEKGKLTAEQADAALARLRP---VEA 80 (507)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEE---eCC
Confidence 358999999 9999999999999998 9999999871 11 1111 11100 0123454 346
Q ss_pred hhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCC-CeEEEEecCCCCChhHHHHHHHHHhCCCCCC
Q 017551 82 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNSTVPIAAEVFKKAGTYDPK 160 (369)
Q Consensus 82 l~~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~ 160 (369)
+ +++++||+||.+. .++..+.+.+...++++++ +++ ++||-..+-..-+++ .. -.|.
T Consensus 81 ~-~~~~~aDlViEav--------------~E~~~vK~~vf~~l~~~~~~~ai--lasntStl~i~~la~----~~-~~p~ 138 (507)
T PRK08268 81 L-ADLADCDLVVEAI--------------VERLDVKQALFAQLEAIVSPDCI--LATNTSSLSITAIAA----AL-KHPE 138 (507)
T ss_pred H-HHhCCCCEEEEcC--------------cccHHHHHHHHHHHHhhCCCCcE--EEECCCCCCHHHHHh----hc-CCcc
Confidence 6 5688999999985 5677888888888999985 553 366766543222222 21 2356
Q ss_pred cEEEechhc
Q 017551 161 KLLGVTMLD 169 (369)
Q Consensus 161 kviG~t~Ld 169 (369)
|++|+..++
T Consensus 139 r~~G~hff~ 147 (507)
T PRK08268 139 RVAGLHFFN 147 (507)
T ss_pred cEEEEeecC
Confidence 788875444
No 65
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.26 E-value=5e-06 Score=79.98 Aligned_cols=121 Identities=18% Similarity=0.238 Sum_probs=73.9
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhH---HHHhh-----cccC--------CCeEEEEeCCCCh
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGV---TADIS-----HMDT--------GAVVRGFLGQPQL 82 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~---~~dL~-----~~~~--------~~~v~~~~~t~dl 82 (369)
.||+|||+ |.+|..++..++..++ +|++||+++. ... ..++. .... ..+++. ++++
T Consensus 2 ~~V~VIG~-G~mG~~iA~~la~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~---~~~~ 75 (288)
T PRK09260 2 EKLVVVGA-GVMGRGIAYVFAVSGF--QTTLVDIKQEQLESAQQEIASIFEQGVARGKLTEAARQAALARLSY---SLDL 75 (288)
T ss_pred cEEEEECc-cHHHHHHHHHHHhCCC--cEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEE---eCcH
Confidence 48999999 9999999999999988 9999999871 111 01110 0000 112333 4577
Q ss_pred hhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcE
Q 017551 83 ENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKL 162 (369)
Q Consensus 83 ~~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kv 162 (369)
++++++||+||++. ..+..+.+.+..++.++++... ++++|...+-...++ ... -.+.|+
T Consensus 76 ~~~~~~aD~Vi~av--------------pe~~~~k~~~~~~l~~~~~~~~-il~~~tSt~~~~~l~----~~~-~~~~r~ 135 (288)
T PRK09260 76 KAAVADADLVIEAV--------------PEKLELKKAVFETADAHAPAEC-YIATNTSTMSPTEIA----SFT-KRPERV 135 (288)
T ss_pred HHhhcCCCEEEEec--------------cCCHHHHHHHHHHHHhhCCCCc-EEEEcCCCCCHHHHH----hhc-CCcccE
Confidence 78999999999984 2234556666667777775442 234555543222121 211 124567
Q ss_pred EEech
Q 017551 163 LGVTM 167 (369)
Q Consensus 163 iG~t~ 167 (369)
+|+..
T Consensus 136 ~g~h~ 140 (288)
T PRK09260 136 IAMHF 140 (288)
T ss_pred EEEec
Confidence 77743
No 66
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.23 E-value=1.6e-05 Score=76.62 Aligned_cols=122 Identities=20% Similarity=0.304 Sum_probs=76.1
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHH----Hhh----cccC--------CCeEEEEeCCCC
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTA----DIS----HMDT--------GAVVRGFLGQPQ 81 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~----dL~----~~~~--------~~~v~~~~~t~d 81 (369)
.+||+|||+ |.+|..++..++.++. +|++||.+.. ..... .+. .... ..+++. +++
T Consensus 4 ~~kI~vIGa-G~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~---~~~ 77 (292)
T PRK07530 4 IKKVGVIGA-GQMGNGIAHVCALAGY--DVLLNDVSADRLEAGLATINGNLARQVAKGKISEEARAAALARIST---ATD 77 (292)
T ss_pred CCEEEEECC-cHHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEe---eCC
Confidence 459999999 9999999999999988 9999999861 11111 111 1000 022443 356
Q ss_pred hhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCC-CeEEEEecCCCCChhHHHHHHHHHhCCCCCC
Q 017551 82 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNSTVPIAAEVFKKAGTYDPK 160 (369)
Q Consensus 82 l~~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~ 160 (369)
+ +++++||+||++. ..+..+.+.+.+.+.++++ ++++ +||-..+-..-++ ... -.+.
T Consensus 78 ~-~~~~~aD~Vieav--------------pe~~~~k~~~~~~l~~~~~~~~ii--~s~ts~~~~s~la---~~~--~~~~ 135 (292)
T PRK07530 78 L-EDLADCDLVIEAA--------------TEDETVKRKIFAQLCPVLKPEAIL--ATNTSSISITRLA---SAT--DRPE 135 (292)
T ss_pred H-HHhcCCCEEEEcC--------------cCCHHHHHHHHHHHHhhCCCCcEE--EEcCCCCCHHHHH---hhc--CCcc
Confidence 6 5789999999984 2234555666677888874 5543 4666554321121 221 2356
Q ss_pred cEEEechhc
Q 017551 161 KLLGVTMLD 169 (369)
Q Consensus 161 kviG~t~Ld 169 (369)
|++|+..++
T Consensus 136 r~~g~h~~~ 144 (292)
T PRK07530 136 RFIGIHFMN 144 (292)
T ss_pred cEEEeeccC
Confidence 888886555
No 67
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=98.22 E-value=1.6e-05 Score=81.03 Aligned_cols=113 Identities=14% Similarity=0.050 Sum_probs=76.6
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV 98 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~ 98 (369)
++|||.|+||+|+||++++..|...+. +|+.+|.... +....+.+......+.... .+-+..++.++|+||.+|+.
T Consensus 119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~--~V~~ldr~~~-~~~~~~~~~~~~~~~~~~~-~Di~~~~~~~~D~ViHlAa~ 194 (436)
T PLN02166 119 KRLRIVVTGGAGFVGSHLVDKLIGRGD--EVIVIDNFFT-GRKENLVHLFGNPRFELIR-HDVVEPILLEVDQIYHLACP 194 (436)
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCC--EEEEEeCCCC-ccHhHhhhhccCCceEEEE-CccccccccCCCEEEECcee
Confidence 358999999999999999999999887 9999997531 1111111111112344332 12233567899999999875
Q ss_pred CC--CCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551 99 PR--KPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 137 (369)
Q Consensus 99 p~--k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 137 (369)
.. ....+..+++..|+....++++.+.+... .+|++|
T Consensus 195 ~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~--r~V~~S 233 (436)
T PLN02166 195 ASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--RFLLTS 233 (436)
T ss_pred ccchhhccCHHHHHHHHHHHHHHHHHHHHHhCC--EEEEEC
Confidence 32 22234567788999999999999988753 455554
No 68
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=98.21 E-value=1.8e-05 Score=76.89 Aligned_cols=121 Identities=23% Similarity=0.309 Sum_probs=73.5
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhccc-----------CCCeEEEEeCCCChhhhc
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMD-----------TGAVVRGFLGQPQLENAL 86 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~-----------~~~~v~~~~~t~dl~~al 86 (369)
.+||+|||+ |.+|..++..|+..+. +|+++|.+.. ......+.+.. ...+++. ++|+.+++
T Consensus 4 ~~~I~vIGa-G~mG~~iA~~l~~~g~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~---~~~~~~~~ 77 (311)
T PRK06130 4 IQNLAIIGA-GTMGSGIAALFARKGL--QVVLIDVMEGALERARGVIERALGVYAPLGIASAGMGRIRM---EAGLAAAV 77 (311)
T ss_pred ccEEEEECC-CHHHHHHHHHHHhCCC--eEEEEECCHHHHHHHHHHHHHHHHHhhhcccHHHHhhceEE---eCCHHHHh
Confidence 359999999 9999999999999887 9999999761 11111111000 0012332 35677789
Q ss_pred CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEec
Q 017551 87 TGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT 166 (369)
Q Consensus 87 ~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~t 166 (369)
++||+||++. ........++...+..+++... +++||...+...-++ ... -.+.+++|+.
T Consensus 78 ~~aDlVi~av--------------~~~~~~~~~v~~~l~~~~~~~~-ii~s~tsg~~~~~l~---~~~--~~~~~~ig~h 137 (311)
T PRK06130 78 SGADLVIEAV--------------PEKLELKRDVFARLDGLCDPDT-IFATNTSGLPITAIA---QAV--TRPERFVGTH 137 (311)
T ss_pred ccCCEEEEec--------------cCcHHHHHHHHHHHHHhCCCCc-EEEECCCCCCHHHHH---hhc--CCcccEEEEc
Confidence 9999999984 2223445566666777765432 335666665432221 222 1246788874
No 69
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=98.18 E-value=1.4e-05 Score=76.83 Aligned_cols=108 Identities=19% Similarity=0.269 Sum_probs=76.4
Q ss_pred EEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEE-eCCCChhhhcCCCcEEEEcCCCCCCC
Q 017551 24 AILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGF-LGQPQLENALTGMDLVIIPAGVPRKP 102 (369)
Q Consensus 24 ~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~-~~t~dl~~al~~ADiVii~ag~p~k~ 102 (369)
.|+||+|++|++++..|..++...+|+.+|+........++.......-+... +...++.+|++++|+||.+|+...-.
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa~~~~~ 80 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQKSGVKEYIQGDITDPESLEEALEGVDVVFHTAAPVPPW 80 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhcccceeEEEeccccHHHHHHHhcCCceEEEeCcccccc
Confidence 38999999999999999999866699999987632221222222110012221 22457889999999999998753223
Q ss_pred C-CCHHHHHHHHHHHHHHHHHHHhhhCCCe
Q 017551 103 G-MTRDDLFNINAGIVRTLCEGIAKCCPNA 131 (369)
Q Consensus 103 g-~~r~~~~~~N~~i~~~i~~~i~~~~p~a 131 (369)
+ .....+...|+.-.+.+.+...+..-+.
T Consensus 81 ~~~~~~~~~~vNV~GT~nvl~aa~~~~Vkr 110 (280)
T PF01073_consen 81 GDYPPEEYYKVNVDGTRNVLEAARKAGVKR 110 (280)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHcCCCE
Confidence 3 4567788999999999999999875554
No 70
>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=98.13 E-value=4.9e-05 Score=74.02 Aligned_cols=119 Identities=20% Similarity=0.364 Sum_probs=79.6
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhh--ccc--------CCCeEEEEeCCCChhhhcCCC
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADIS--HMD--------TGAVVRGFLGQPQLENALTGM 89 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~--~~~--------~~~~v~~~~~t~dl~~al~~A 89 (369)
++||+|+|| |.-|+++|..|+.+++ +++||..++. ++.++. |.. .++.+.. ++|+.+++++|
T Consensus 1 ~~kI~ViGa-GswGTALA~~la~ng~--~V~lw~r~~~--~~~~i~~~~~N~~yLp~i~lp~~l~a---t~Dl~~a~~~a 72 (329)
T COG0240 1 MMKIAVIGA-GSWGTALAKVLARNGH--EVRLWGRDEE--IVAEINETRENPKYLPGILLPPNLKA---TTDLAEALDGA 72 (329)
T ss_pred CceEEEEcC-ChHHHHHHHHHHhcCC--eeEEEecCHH--HHHHHHhcCcCccccCCccCCccccc---ccCHHHHHhcC
Confidence 369999999 9999999999999997 9999999862 222333 222 1233443 67999999999
Q ss_pred cEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCC-hhHHHHHHHHHhCCCCCCcEEEe
Q 017551 90 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNS-TVPIAAEVFKKAGTYDPKKLLGV 165 (369)
Q Consensus 90 DiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~-~t~i~ae~~~~~~~~~~~kviG~ 165 (369)
|+||+.. | ...++++++++..+- ++..++.+|-=.+. ....++++++.. +|.++ +++
T Consensus 73 d~iv~av--P--------------s~~~r~v~~~l~~~l~~~~~iv~~sKGie~~t~~l~seii~e~--l~~~~-~~v 131 (329)
T COG0240 73 DIIVIAV--P--------------SQALREVLRQLKPLLLKDAIIVSATKGLEPETGRLLSEIIEEE--LPDNP-IAV 131 (329)
T ss_pred CEEEEEC--C--------------hHHHHHHHHHHhhhccCCCeEEEEeccccCCCcchHHHHHHHH--cCCCe-EEE
Confidence 9999983 3 345667777775443 67777777622111 223345666665 55555 444
No 71
>PLN02545 3-hydroxybutyryl-CoA dehydrogenase
Probab=98.13 E-value=2.2e-05 Score=75.67 Aligned_cols=122 Identities=20% Similarity=0.325 Sum_probs=76.9
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch-hHH--------HHhhcccC---------CCeEEEEeCCCCh
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVT--------ADISHMDT---------GAVVRGFLGQPQL 82 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~-g~~--------~dL~~~~~---------~~~v~~~~~t~dl 82 (369)
.||+|||+ |.+|+.++..++..+. +|++||.+... ..+ .++..... ...+.. ++++
T Consensus 5 ~~V~vIG~-G~mG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---~~~~ 78 (295)
T PLN02545 5 KKVGVVGA-GQMGSGIAQLAAAAGM--DVWLLDSDPAALSRGLDSISSSLARLVKKGKMSQEEADATLGRIRC---TTNL 78 (295)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceEe---eCCH
Confidence 58999999 9999999999999887 99999998621 110 11211100 012222 3455
Q ss_pred hhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCC-CeEEEEecCCCCChhHHHHHHHHHhCCCCCCc
Q 017551 83 ENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNSTVPIAAEVFKKAGTYDPKK 161 (369)
Q Consensus 83 ~~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~k 161 (369)
+++++||+||++. .++..+...+...+.++++ +++ ++||-..+...-+ ..... .+.+
T Consensus 79 -~~~~~aD~Vieav--------------~e~~~~k~~v~~~l~~~~~~~~i--l~s~tS~i~~~~l----~~~~~-~~~r 136 (295)
T PLN02545 79 -EELRDADFIIEAI--------------VESEDLKKKLFSELDRICKPSAI--LASNTSSISITRL----ASATQ-RPQQ 136 (295)
T ss_pred -HHhCCCCEEEEcC--------------ccCHHHHHHHHHHHHhhCCCCcE--EEECCCCCCHHHH----HhhcC-CCcc
Confidence 6789999999995 4455667777777887774 553 3566666532222 22211 2467
Q ss_pred EEEechhcH
Q 017551 162 LLGVTMLDV 170 (369)
Q Consensus 162 viG~t~Ld~ 170 (369)
++|+...+-
T Consensus 137 ~~g~h~~~p 145 (295)
T PLN02545 137 VIGMHFMNP 145 (295)
T ss_pred eEEEeccCC
Confidence 888865443
No 72
>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated
Probab=98.12 E-value=2.6e-05 Score=80.86 Aligned_cols=104 Identities=14% Similarity=0.128 Sum_probs=71.0
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchh-HHHH--------hh---cccC--CCeEEEEeCCCChhhh
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG-VTAD--------IS---HMDT--GAVVRGFLGQPQLENA 85 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g-~~~d--------L~---~~~~--~~~v~~~~~t~dl~~a 85 (369)
.+||+|||+ |.||+.++..++..|+ +|.+||++.... ...+ +. .... ..+++. ++++.++
T Consensus 4 i~kIavIG~-G~MG~~iA~~la~~G~--~V~v~D~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~~---~~~~~ea 77 (495)
T PRK07531 4 IMKAACIGG-GVIGGGWAARFLLAGI--DVAVFDPHPEAERIIGEVLANAERAYAMLTDAPLPPEGRLTF---CASLAEA 77 (495)
T ss_pred cCEEEEECc-CHHHHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHhhhccchhhhhhceEe---eCCHHHH
Confidence 359999999 9999999999999998 999999986211 1111 00 0000 112332 4577789
Q ss_pred cCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChh
Q 017551 86 LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTV 144 (369)
Q Consensus 86 l~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t 144 (369)
+++||+|+.+. ..+..+.+.+...+.+++|+.. ++.||-.++..
T Consensus 78 ~~~aD~Vieav--------------pe~~~vk~~l~~~l~~~~~~~~-iI~SsTsgi~~ 121 (495)
T PRK07531 78 VAGADWIQESV--------------PERLDLKRRVLAEIDAAARPDA-LIGSSTSGFLP 121 (495)
T ss_pred hcCCCEEEEcC--------------cCCHHHHHHHHHHHHhhCCCCc-EEEEcCCCCCH
Confidence 99999999984 3345666777777888886553 45777777643
No 73
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=98.09 E-value=3e-05 Score=75.34 Aligned_cols=122 Identities=21% Similarity=0.241 Sum_probs=75.2
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch-hHHH--------HhhcccC---------CCeEEEEeCCCCh
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTA--------DISHMDT---------GAVVRGFLGQPQL 82 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~-g~~~--------dL~~~~~---------~~~v~~~~~t~dl 82 (369)
+||+|||+ |.+|+.++..|+..++ +|++||.+... ..+. .+..... ..+++. ++++
T Consensus 3 ~~V~VIG~-G~mG~~iA~~la~~G~--~V~v~d~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~i~~---~~~~ 76 (308)
T PRK06129 3 GSVAIIGA-GLIGRAWAIVFARAGH--EVRLWDADPAAAAAAPAYIAGRLEDLAAFDLLDGEAPDAVLARIRV---TDSL 76 (308)
T ss_pred cEEEEECc-cHHHHHHHHHHHHCCC--eeEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCchhhHHHHhcCeEE---ECcH
Confidence 58999998 9999999999999998 99999998611 1100 1111110 122343 4578
Q ss_pred hhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcE
Q 017551 83 ENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKL 162 (369)
Q Consensus 83 ~~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kv 162 (369)
.+++++||+|+.+. ..+..+.+.+...+.+.+++..++ .||-......-++ .... .+.++
T Consensus 77 ~~a~~~ad~Vi~av--------------pe~~~~k~~~~~~l~~~~~~~~ii-~ssts~~~~~~la---~~~~--~~~~~ 136 (308)
T PRK06129 77 ADAVADADYVQESA--------------PENLELKRALFAELDALAPPHAIL-ASSTSALLASAFT---EHLA--GRERC 136 (308)
T ss_pred HHhhCCCCEEEECC--------------cCCHHHHHHHHHHHHHhCCCcceE-EEeCCCCCHHHHH---HhcC--CcccE
Confidence 78899999999984 223445555666777777665444 4555443332121 2221 24567
Q ss_pred EEechh
Q 017551 163 LGVTML 168 (369)
Q Consensus 163 iG~t~L 168 (369)
++.+..
T Consensus 137 ~~~hp~ 142 (308)
T PRK06129 137 LVAHPI 142 (308)
T ss_pred EEEecC
Confidence 776544
No 74
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=98.04 E-value=1.9e-05 Score=75.98 Aligned_cols=121 Identities=20% Similarity=0.183 Sum_probs=76.7
Q ss_pred EEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEE----EeC-C---CChhhhcC--CCc
Q 017551 23 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRG----FLG-Q---PQLENALT--GMD 90 (369)
Q Consensus 23 I~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~----~~~-t---~dl~~al~--~AD 90 (369)
|.|+||+|++|+.++..|+..++ .+|+++|.++ ......++.......+++. ..+ - ..+..+++ +.|
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p-~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pd 79 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGP-KKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPD 79 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB--SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-S
T ss_pred CEEEccccHHHHHHHHHHHhcCC-CeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCC
Confidence 68999999999999999998864 5899999998 3444455532111122321 111 1 22456777 999
Q ss_pred EEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec----CCCCChh
Q 017551 91 LVIIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS----NPVNSTV 144 (369)
Q Consensus 91 iVii~ag~p~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t----NPv~~~t 144 (369)
+|+.+|..-.-| .....+.+..|+--.+.+++...++.-+-+|.+-| ||+++|-
T Consensus 80 iVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKAv~PtnvmG 139 (293)
T PF02719_consen 80 IVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKAVNPTNVMG 139 (293)
T ss_dssp EEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGCSS--SHHH
T ss_pred EEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccccCCCCcHHH
Confidence 999998753322 23467778999999999999999998777776664 7777763
No 75
>PLN02427 UDP-apiose/xylose synthase
Probab=98.04 E-value=4.8e-05 Score=75.84 Aligned_cols=114 Identities=17% Similarity=0.085 Sum_probs=73.0
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhC-CCCcEEEEEeCCCchhHHHHhhcc---cCCCeEEEEeC----CCChhhhcCCCc
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVNTPGVTADISHM---DTGAVVRGFLG----QPQLENALTGMD 90 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~-~~~~el~L~D~~~~~g~~~dL~~~---~~~~~v~~~~~----t~dl~~al~~AD 90 (369)
++|||.|+||+|++|++++..|..+ +. +|+.+|.+.... ..+... ....+++...+ ..++.++++++|
T Consensus 13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~--~V~~l~r~~~~~--~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d 88 (386)
T PLN02427 13 KPLTICMIGAGGFIGSHLCEKLMTETPH--KVLALDVYNDKI--KHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMAD 88 (386)
T ss_pred cCcEEEEECCcchHHHHHHHHHHhcCCC--EEEEEecCchhh--hhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCC
Confidence 4689999999999999999999987 46 899999754211 111111 01123333221 234567788999
Q ss_pred EEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecC
Q 017551 91 LVIIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN 138 (369)
Q Consensus 91 iVii~ag~p~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tN 138 (369)
+||.+|+..... .....+.+..|+.....+.+..++.. ..++++|.
T Consensus 89 ~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~--~r~v~~SS 136 (386)
T PLN02427 89 LTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFST 136 (386)
T ss_pred EEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC--CEEEEEee
Confidence 999999864211 12234556678887888888877654 34565653
No 76
>PLN02650 dihydroflavonol-4-reductase
Probab=97.99 E-value=0.00014 Score=71.49 Aligned_cols=118 Identities=13% Similarity=0.070 Sum_probs=75.8
Q ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch-hHHHHhhcc-cCCCeEEEEe----CCCChhhhcCCCcE
Q 017551 18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHM-DTGAVVRGFL----GQPQLENALTGMDL 91 (369)
Q Consensus 18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~-g~~~dL~~~-~~~~~v~~~~----~t~dl~~al~~ADi 91 (369)
+..++|.|+||+|++|++++..|+..+. +|++++.+... ....++... .....+..+. ....+.++++++|+
T Consensus 3 ~~~k~iLVTGatGfIGs~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~ 80 (351)
T PLN02650 3 SQKETVCVTGASGFIGSWLVMRLLERGY--TVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTG 80 (351)
T ss_pred CCCCEEEEeCCcHHHHHHHHHHHHHCCC--EEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCE
Confidence 4456999999999999999999999887 88888776511 111222111 0111222221 12345678889999
Q ss_pred EEEcCCCCCCCCCC-HHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551 92 VIIPAGVPRKPGMT-RDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 137 (369)
Q Consensus 92 Vii~ag~p~k~g~~-r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 137 (369)
||.+|+........ ....+..|+.....+.+.+.+...-..++++|
T Consensus 81 ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~S 127 (351)
T PLN02650 81 VFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTS 127 (351)
T ss_pred EEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEec
Confidence 99998753211112 23567889999999999988765333455554
No 77
>PLN02206 UDP-glucuronate decarboxylase
Probab=97.99 E-value=6.6e-05 Score=76.72 Aligned_cols=113 Identities=16% Similarity=0.062 Sum_probs=74.9
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV 98 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~ 98 (369)
+.|||.|+||+|+||++++..|..++. +|+.+|..... ....+.+.....+++...+ +-+..++.++|+||.+|+.
T Consensus 118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~--~V~~ld~~~~~-~~~~~~~~~~~~~~~~i~~-D~~~~~l~~~D~ViHlAa~ 193 (442)
T PLN02206 118 KGLRVVVTGGAGFVGSHLVDRLMARGD--SVIVVDNFFTG-RKENVMHHFSNPNFELIRH-DVVEPILLEVDQIYHLACP 193 (442)
T ss_pred CCCEEEEECcccHHHHHHHHHHHHCcC--EEEEEeCCCcc-chhhhhhhccCCceEEEEC-CccChhhcCCCEEEEeeee
Confidence 458999999999999999999999987 89999864310 0011111111233343321 1233567899999999875
Q ss_pred CC--CCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551 99 PR--KPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 137 (369)
Q Consensus 99 p~--k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 137 (369)
.. .........+..|+.....+.+.+.+.. ..+|++|
T Consensus 194 ~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g--~r~V~~S 232 (442)
T PLN02206 194 ASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG--ARFLLTS 232 (442)
T ss_pred cchhhhhcCHHHHHHHHHHHHHHHHHHHHHhC--CEEEEEC
Confidence 32 1123456778899999999999998775 3555554
No 78
>PLN00198 anthocyanidin reductase; Provisional
Probab=97.99 E-value=0.00015 Score=70.89 Aligned_cols=116 Identities=16% Similarity=0.125 Sum_probs=73.7
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC-chhHHHHhhcccCCCeEEEEeC----CCChhhhcCCCcEEEE
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLG----QPQLENALTGMDLVII 94 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~-~~g~~~dL~~~~~~~~v~~~~~----t~dl~~al~~ADiVii 94 (369)
.++|.|+||+|++|++++..|+..+. +|++++.+. ......++.......++..+.+ ..++.++++++|+||.
T Consensus 9 ~~~vlItG~~GfIG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih 86 (338)
T PLN00198 9 KKTACVIGGTGFLASLLIKLLLQKGY--AVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAGCDLVFH 86 (338)
T ss_pred CCeEEEECCchHHHHHHHHHHHHCCC--EEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcCCEEEE
Confidence 57999999999999999999999887 887776654 2221111211111122332221 2235677889999999
Q ss_pred cCCCCCCCCCC-HHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551 95 PAGVPRKPGMT-RDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 137 (369)
Q Consensus 95 ~ag~p~k~g~~-r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 137 (369)
.|+.......+ ..+++..|+.....+.+.+.+...-..++++|
T Consensus 87 ~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~S 130 (338)
T PLN00198 87 VATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTS 130 (338)
T ss_pred eCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEee
Confidence 98743211122 23466889999999999988764223444443
No 79
>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase. All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.
Probab=97.99 E-value=0.00011 Score=74.36 Aligned_cols=119 Identities=24% Similarity=0.318 Sum_probs=75.6
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhccc----------------CCCeEEEEeCCCChhh
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD----------------TGAVVRGFLGQPQLEN 84 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~----------------~~~~v~~~~~t~dl~~ 84 (369)
|||+|||. |.+|.+++..|+..++ +|++||++..+. .+|.... ...+++. ++++.+
T Consensus 1 mkI~vIGl-G~~G~~lA~~La~~G~--~V~~~d~~~~~v--~~l~~g~~~~~e~~l~~~~~~~~~~g~l~~---~~~~~~ 72 (411)
T TIGR03026 1 MKIAVIGL-GYVGLPLAALLADLGH--EVTGVDIDQEKV--DKLNKGKSPIYEPGLDELLAKALAAGRLRA---TTDYED 72 (411)
T ss_pred CEEEEECC-CchhHHHHHHHHhcCC--eEEEEECCHHHH--HHhhcCCCCCCCCCHHHHHHHhhhcCCeEE---ECCHHH
Confidence 58999999 9999999999999988 899999986221 1122110 0122443 356778
Q ss_pred hcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEe-cCCCCChhHHHHHHHHH
Q 017551 85 ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLI-SNPVNSTVPIAAEVFKK 153 (369)
Q Consensus 85 al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~-tNPv~~~t~i~ae~~~~ 153 (369)
++++||+||++.+.|..... .-+...+.+..+.+.++. ++.++++. |-|.+....+...++.+
T Consensus 73 ~~~~advvii~vpt~~~~~~------~~d~~~v~~~~~~i~~~l~~g~lvi~~STv~pgt~~~l~~~~~~~ 137 (411)
T TIGR03026 73 AIRDADVIIICVPTPLKEDG------SPDLSYVESAAETIAKHLRKGATVVLESTVPPGTTEEVVKPILER 137 (411)
T ss_pred HHhhCCEEEEEeCCCCCCCC------CcChHHHHHHHHHHHHhcCCCCEEEEeCcCCCCchHHHHHHHHHh
Confidence 89999999999877754321 112344445555555554 45555544 46666665555444444
No 80
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=97.98 E-value=0.00014 Score=70.04 Aligned_cols=115 Identities=17% Similarity=0.109 Sum_probs=74.7
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch-hHHHHhhccc-CCCeEEEEe----CCCChhhhcCCCcEEE
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHMD-TGAVVRGFL----GQPQLENALTGMDLVI 93 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~-g~~~dL~~~~-~~~~v~~~~----~t~dl~~al~~ADiVi 93 (369)
.+||.|+||+|++|++++..|..++. +|++++.+... .....+.... ...++..+. ...++.++++++|+||
T Consensus 4 ~~~ilVtGatGfIG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 81 (322)
T PLN02662 4 GKVVCVTGASGYIASWLVKLLLQRGY--TVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVF 81 (322)
T ss_pred CCEEEEECChHHHHHHHHHHHHHCCC--EEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEE
Confidence 46999999999999999999999988 88888876521 1112222111 012333221 1234667889999999
Q ss_pred EcCCCCCCC-CCCHHHHHHHHHHHHHHHHHHHhhh-CCCeEEEEec
Q 017551 94 IPAGVPRKP-GMTRDDLFNINAGIVRTLCEGIAKC-CPNATVNLIS 137 (369)
Q Consensus 94 i~ag~p~k~-g~~r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~t 137 (369)
..|+..... .....+.+..|+.....+.+.+.+. ... .++++|
T Consensus 82 h~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~-~~v~~S 126 (322)
T PLN02662 82 HTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVK-RVVVTS 126 (322)
T ss_pred EeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCC-EEEEcc
Confidence 998754221 1222366788999999999988776 333 344443
No 81
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=97.92 E-value=0.00014 Score=75.02 Aligned_cols=126 Identities=19% Similarity=0.236 Sum_probs=92.7
Q ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEeC----CCChhhhcCC--C
Q 017551 18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLG----QPQLENALTG--M 89 (369)
Q Consensus 18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~~----t~dl~~al~~--A 89 (369)
-+.+.|.|+||+|++|+.++..++..++ ++|+++|.++ ......+|.+.....++..+.+ ...++.++++ .
T Consensus 248 ~~gK~vLVTGagGSiGsel~~qil~~~p-~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kv 326 (588)
T COG1086 248 LTGKTVLVTGGGGSIGSELCRQILKFNP-KEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHKV 326 (588)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHhcCC-CEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCCC
Confidence 3457999999999999999998887743 5999999998 3444455554321234444332 1235678888 9
Q ss_pred cEEEEcCCCCCCCCC--CHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec----CCCCChh
Q 017551 90 DLVIIPAGVPRKPGM--TRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS----NPVNSTV 144 (369)
Q Consensus 90 DiVii~ag~p~k~g~--~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t----NPv~~~t 144 (369)
|+|+.+|..-.-|=+ ...+-...|+--.++++++..++.=+.++.+-| ||.|+|-
T Consensus 327 d~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDKAV~PtNvmG 387 (588)
T COG1086 327 DIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDKAVNPTNVMG 387 (588)
T ss_pred ceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCcccCCchHhh
Confidence 999999986555543 456778999999999999999988777777765 7887763
No 82
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=97.91 E-value=0.00015 Score=71.34 Aligned_cols=116 Identities=16% Similarity=0.044 Sum_probs=75.9
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhh-ccc--CCCeEEEEeC----CCChhhhcCCC
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADIS-HMD--TGAVVRGFLG----QPQLENALTGM 89 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~-~~~--~~~~v~~~~~----t~dl~~al~~A 89 (369)
+.+||.|+||+|++|++++..|+..+. +|+.+|.... .....++. ... ...++..+.+ ..++.+.++++
T Consensus 14 ~~~~vlVtGatGfiG~~lv~~L~~~g~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~ 91 (348)
T PRK15181 14 APKRWLITGVAGFIGSGLLEELLFLNQ--TVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKNV 91 (348)
T ss_pred cCCEEEEECCccHHHHHHHHHHHHCCC--EEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhCC
Confidence 347999999999999999999998887 9999997541 11111111 000 0123333321 12344567999
Q ss_pred cEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551 90 DLVIIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 137 (369)
Q Consensus 90 DiVii~ag~p~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 137 (369)
|+||..|+.+..+ .+........|+....++.+.+++...+- ++++|
T Consensus 92 d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~-~v~~S 140 (348)
T PRK15181 92 DYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSS-FTYAA 140 (348)
T ss_pred CEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCe-EEEee
Confidence 9999998864422 23445678899999999999998875443 44443
No 83
>PRK15057 UDP-glucose 6-dehydrogenase; Provisional
Probab=97.89 E-value=0.00014 Score=73.04 Aligned_cols=113 Identities=19% Similarity=0.247 Sum_probs=69.0
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhccc--------------CCCeEEEEeCCCChhhhc
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD--------------TGAVVRGFLGQPQLENAL 86 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~--------------~~~~v~~~~~t~dl~~al 86 (369)
|||+|||+ |.||.+++..++. ++ +|+.||+++.+ +..+.... ...+++. +++..++.
T Consensus 1 mkI~VIGl-GyvGl~~A~~lA~-G~--~VigvD~d~~k--v~~l~~g~~~~~e~~l~~~l~~~~~~l~~---t~~~~~~~ 71 (388)
T PRK15057 1 MKITISGT-GYVGLSNGLLIAQ-NH--EVVALDILPSR--VAMLNDRISPIVDKEIQQFLQSDKIHFNA---TLDKNEAY 71 (388)
T ss_pred CEEEEECC-CHHHHHHHHHHHh-CC--cEEEEECCHHH--HHHHHcCCCCCCCcCHHHHHHhCCCcEEE---ecchhhhh
Confidence 69999999 9999999987775 66 99999998721 11111100 1122322 45566788
Q ss_pred CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEe-cCCCCChhHHH
Q 017551 87 TGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI-SNPVNSTVPIA 147 (369)
Q Consensus 87 ~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~-tNPv~~~t~i~ 147 (369)
++||+||++.+.|....... -++..+.++++.+.+..|+.++++- |-|.+..-.+.
T Consensus 72 ~~ad~vii~Vpt~~~~k~~~-----~dl~~v~~v~~~i~~~~~g~lVV~~STv~pgtt~~l~ 128 (388)
T PRK15057 72 RDADYVIIATPTDYDPKTNY-----FNTSSVESVIKDVVEINPYAVMVIKSTVPVGFTAAMH 128 (388)
T ss_pred cCCCEEEEeCCCCCccCCCC-----cChHHHHHHHHHHHhcCCCCEEEEeeecCCchHHHHH
Confidence 99999999976663221111 1233444444555544455555444 67877765554
No 84
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=97.83 E-value=0.00017 Score=70.35 Aligned_cols=113 Identities=17% Similarity=0.227 Sum_probs=76.4
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchh--HHHHhhcccCCCeEEEEe----CCCChhhhcCCCcEEE
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTGAVVRGFL----GQPQLENALTGMDLVI 93 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g--~~~dL~~~~~~~~v~~~~----~t~dl~~al~~ADiVi 93 (369)
.++|.|+||+|++|++++..|+..+...+|+++|.+.... ...++.. ..+..+. ...++.+++++.|+||
T Consensus 4 ~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~----~~~~~v~~Dl~d~~~l~~~~~~iD~Vi 79 (324)
T TIGR03589 4 NKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPA----PCLRFFIGDVRDKERLTRALRGVDYVV 79 (324)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCC----CcEEEEEccCCCHHHHHHHHhcCCEEE
Confidence 4689999999999999999998876334899999765221 1112211 2232221 1234566788999999
Q ss_pred EcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551 94 IPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 137 (369)
Q Consensus 94 i~ag~p~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 137 (369)
.+||....+ ..+..+.+..|+.....+.+.+.+.... .++++|
T Consensus 80 h~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~-~iV~~S 124 (324)
T TIGR03589 80 HAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVK-RVVALS 124 (324)
T ss_pred ECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCC-EEEEEe
Confidence 999864322 2345677889999999999999876543 455554
No 85
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=97.83 E-value=0.0002 Score=65.57 Aligned_cols=96 Identities=21% Similarity=0.315 Sum_probs=64.4
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCCC
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP 99 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~p 99 (369)
+|+++|+|+ |++|+.++..+...++ ||..-..+..+.....-... .+.++.. +.++|.+.||+||.+. |
T Consensus 1 m~~~~i~Gt-GniG~alA~~~a~ag~--eV~igs~r~~~~~~a~a~~l--~~~i~~~----~~~dA~~~aDVVvLAV--P 69 (211)
T COG2085 1 MMIIAIIGT-GNIGSALALRLAKAGH--EVIIGSSRGPKALAAAAAAL--GPLITGG----SNEDAAALADVVVLAV--P 69 (211)
T ss_pred CcEEEEecc-ChHHHHHHHHHHhCCC--eEEEecCCChhHHHHHHHhh--ccccccC----ChHHHHhcCCEEEEec--c
Confidence 468999998 9999999999999998 88887666533322211111 2344432 3468999999999994 4
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCC
Q 017551 100 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV 140 (369)
Q Consensus 100 ~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv 140 (369)
+.... ++.+++...-.+-++|-.|||.
T Consensus 70 ----------~~a~~----~v~~~l~~~~~~KIvID~tnp~ 96 (211)
T COG2085 70 ----------FEAIP----DVLAELRDALGGKIVIDATNPI 96 (211)
T ss_pred ----------HHHHH----hHHHHHHHHhCCeEEEecCCCc
Confidence 13333 4444444433467788899995
No 86
>PRK12439 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=97.77 E-value=0.00037 Score=68.82 Aligned_cols=119 Identities=16% Similarity=0.180 Sum_probs=74.8
Q ss_pred CCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcc----cC-------CCeEEEEeCCCChhhh
Q 017551 17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHM----DT-------GAVVRGFLGQPQLENA 85 (369)
Q Consensus 17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~----~~-------~~~v~~~~~t~dl~~a 85 (369)
.++.|||+|+|+ |.+|+.++..|..++ ++++|..++.. ..++... .. ..++.. ++|+.++
T Consensus 4 ~~~~mkI~IiGa-Ga~G~alA~~La~~g---~v~l~~~~~~~--~~~i~~~~~~~~~l~~~~~l~~~i~~---t~d~~~a 74 (341)
T PRK12439 4 AKREPKVVVLGG-GSWGTTVASICARRG---PTLQWVRSAET--ADDINDNHRNSRYLGNDVVLSDTLRA---TTDFAEA 74 (341)
T ss_pred ccCCCeEEEECC-CHHHHHHHHHHHHCC---CEEEEeCCHHH--HHHHHhcCCCcccCCCCcccCCCeEE---ECCHHHH
Confidence 456789999999 999999999999887 46788765422 2222211 11 112332 4677788
Q ss_pred cCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCh-hHHHHHHHHHhCCCCCCcE
Q 017551 86 LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNST-VPIAAEVFKKAGTYDPKKL 162 (369)
Q Consensus 86 l~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~-t~i~ae~~~~~~~~~~~kv 162 (369)
++++|+||++. | ...++++++++..+. ++..++.++|-.+.- ...+++++.+. +|..++
T Consensus 75 ~~~aDlVilav--p--------------s~~~~~vl~~i~~~l~~~~~vIsl~kGi~~~t~~~~se~i~~~--l~~~~~ 135 (341)
T PRK12439 75 ANCADVVVMGV--P--------------SHGFRGVLTELAKELRPWVPVVSLVKGLEQGTNMRMSQIIEEV--LPGHPA 135 (341)
T ss_pred HhcCCEEEEEe--C--------------HHHHHHHHHHHHhhcCCCCEEEEEEeCCcCCCCCcHHHHHHHH--cCCCCe
Confidence 99999999984 2 234556666666553 566788888877641 12223445553 344444
No 87
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=97.76 E-value=0.00019 Score=69.91 Aligned_cols=117 Identities=15% Similarity=0.106 Sum_probs=80.4
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chh--HHHHhhcccCCCeEEEEe----CCCChhhhcCCCc
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPG--VTADISHMDTGAVVRGFL----GQPQLENALTGMD 90 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g--~~~dL~~~~~~~~v~~~~----~t~dl~~al~~AD 90 (369)
..++|+|+||+|+||+.++..|+++|+ +|+--=++. .+. +..+|.... .+++.+. ..+.+.+|+++||
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY--~V~gtVR~~~~~k~~~~L~~l~~a~--~~l~l~~aDL~d~~sf~~ai~gcd 80 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGY--TVRGTVRDPEDEKKTEHLRKLEGAK--ERLKLFKADLLDEGSFDKAIDGCD 80 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCC--EEEEEEcCcchhhhHHHHHhcccCc--ccceEEeccccccchHHHHHhCCC
Confidence 457999999999999999999999998 555443333 222 344555332 2233321 2456889999999
Q ss_pred EEEEcCCCCCCCCC-CHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCC
Q 017551 91 LVIIPAGVPRKPGM-TRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV 140 (369)
Q Consensus 91 iVii~ag~p~k~g~-~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv 140 (369)
.|+.+|...--... .-.+++.-.++....+.+.+.++. .-.=+++|.-.
T Consensus 81 gVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~-sVkrvV~TSS~ 130 (327)
T KOG1502|consen 81 GVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTK-SVKRVVYTSST 130 (327)
T ss_pred EEEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccC-CcceEEEeccH
Confidence 99999864322122 244688889999999999999886 44445566544
No 88
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=97.76 E-value=0.00029 Score=75.54 Aligned_cols=113 Identities=14% Similarity=0.078 Sum_probs=76.1
Q ss_pred CCCCCEEEEEcCCCccHHHHHHHHHhC-CCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeC-CCC----hhhhcCCCc
Q 017551 17 GAAGFKVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG-QPQ----LENALTGMD 90 (369)
Q Consensus 17 ~~~~~KI~IiGA~G~vGs~la~~l~~~-~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~-t~d----l~~al~~AD 90 (369)
+.+.+||.|+||+|++|++++..|... ++ +|+.+|.+.... .++.. ...+..+.+ -+| +.++++++|
T Consensus 312 ~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~--~V~~l~r~~~~~--~~~~~---~~~~~~~~gDl~d~~~~l~~~l~~~D 384 (660)
T PRK08125 312 AKRRTRVLILGVNGFIGNHLTERLLRDDNY--EVYGLDIGSDAI--SRFLG---HPRFHFVEGDISIHSEWIEYHIKKCD 384 (660)
T ss_pred hhcCCEEEEECCCchHHHHHHHHHHhCCCc--EEEEEeCCchhh--hhhcC---CCceEEEeccccCcHHHHHHHhcCCC
Confidence 467789999999999999999999874 56 999999865211 11111 112332211 111 345789999
Q ss_pred EEEEcCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecC
Q 017551 91 LVIIPAGVPR--KPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN 138 (369)
Q Consensus 91 iVii~ag~p~--k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tN 138 (369)
+||..|+... .......++...|+....++.+++.++. . .++++|.
T Consensus 385 ~ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~-~-~~V~~SS 432 (660)
T PRK08125 385 VVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYN-K-RIIFPST 432 (660)
T ss_pred EEEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC-C-eEEEEcc
Confidence 9999987543 2223456677889999999999999875 3 4554543
No 89
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=97.76 E-value=0.00076 Score=65.32 Aligned_cols=117 Identities=17% Similarity=0.118 Sum_probs=74.1
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch-hHHHHhhcc-cCCCeEEEEe----CCCChhhhcCCCcEE
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHM-DTGAVVRGFL----GQPQLENALTGMDLV 92 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~-g~~~dL~~~-~~~~~v~~~~----~t~dl~~al~~ADiV 92 (369)
..++|.|+||+|+||++++..|+..+. +|++.+.+... .....+... ....++..+. ...++.++++++|+|
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 81 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGY--TINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETV 81 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCC--EEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEE
Confidence 357999999999999999999999987 88887766521 111111111 1112233221 123456778899999
Q ss_pred EEcCCCCCCC-C-CCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551 93 IIPAGVPRKP-G-MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 137 (369)
Q Consensus 93 ii~ag~p~k~-g-~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 137 (369)
|.+||..... . ......+..|+.....+.+.+.++.....++++|
T Consensus 82 ih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~S 128 (325)
T PLN02989 82 FHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTS 128 (325)
T ss_pred EEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEec
Confidence 9999854221 1 1234567889999999999887764223455544
No 90
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=97.75 E-value=8.6e-05 Score=59.10 Aligned_cols=94 Identities=21% Similarity=0.249 Sum_probs=61.1
Q ss_pred EEEEEcCCCccHHHHHHHHHhCC-CCcEEEEE-eCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCCC
Q 017551 22 KVAILGAAGGIGQPLAMLMKINP-LVSVLHLY-DVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP 99 (369)
Q Consensus 22 KI~IiGA~G~vGs~la~~l~~~~-~~~el~L~-D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~p 99 (369)
||+|||+ |.+|++++..+...+ ...+|.++ +.+..+ ..++.... . +..+ +.+..+++++||+||++. |
T Consensus 1 kI~iIG~-G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~--~~~~~~~~-~--~~~~--~~~~~~~~~~advvilav--~ 70 (96)
T PF03807_consen 1 KIGIIGA-GNMGSALARGLLASGIKPHEVIIVSSRSPEK--AAELAKEY-G--VQAT--ADDNEEAAQEADVVILAV--K 70 (96)
T ss_dssp EEEEEST-SHHHHHHHHHHHHTTS-GGEEEEEEESSHHH--HHHHHHHC-T--TEEE--SEEHHHHHHHTSEEEE-S---
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCCceeEEeeccCcHHH--HHHHHHhh-c--cccc--cCChHHhhccCCEEEEEE--C
Confidence 7999999 999999999999887 23488866 876521 22222211 1 2221 224578999999999985 1
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCC
Q 017551 100 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP 139 (369)
Q Consensus 100 ~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP 139 (369)
| ..+.++++.+....++.++|-++||
T Consensus 71 --p------------~~~~~v~~~i~~~~~~~~vis~~ag 96 (96)
T PF03807_consen 71 --P------------QQLPEVLSEIPHLLKGKLVISIAAG 96 (96)
T ss_dssp --G------------GGHHHHHHHHHHHHTTSEEEEESTT
T ss_pred --H------------HHHHHHHHHHhhccCCCEEEEeCCC
Confidence 1 2245666666445578888877776
No 91
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=97.73 E-value=0.00025 Score=69.53 Aligned_cols=109 Identities=17% Similarity=0.147 Sum_probs=70.6
Q ss_pred CEEEEEcCCCccHHHHHHHHHhC-CCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCC-----CChhhhcCCCcEEEE
Q 017551 21 FKVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQ-----PQLENALTGMDLVII 94 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~-~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t-----~dl~~al~~ADiVii 94 (369)
|||.|+||+|++|+.++..|+.. +. +|+.+|..... ..++.. ...+..+.+. ..+.++++++|+||.
T Consensus 2 ~~ilVtGatGfiGs~l~~~L~~~~~~--~V~~~~r~~~~--~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH 74 (347)
T PRK11908 2 KKVLILGVNGFIGHHLSKRILETTDW--EVYGMDMQTDR--LGDLVN---HPRMHFFEGDITINKEWIEYHVKKCDVILP 74 (347)
T ss_pred cEEEEECCCcHHHHHHHHHHHhCCCC--eEEEEeCcHHH--HHHhcc---CCCeEEEeCCCCCCHHHHHHHHcCCCEEEE
Confidence 68999999999999999999875 55 89999975311 111211 1223332211 123356789999999
Q ss_pred cCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecC
Q 017551 95 PAGVPR--KPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN 138 (369)
Q Consensus 95 ~ag~p~--k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tN 138 (369)
+|+... ............|+.....+++.+.+.. ..++.+|.
T Consensus 75 ~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~--~~~v~~SS 118 (347)
T PRK11908 75 LVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG--KHLVFPST 118 (347)
T ss_pred CcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcC--CeEEEEec
Confidence 887532 2233445556778888888998888754 35555543
No 92
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=97.73 E-value=0.00055 Score=65.72 Aligned_cols=120 Identities=21% Similarity=0.240 Sum_probs=71.4
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccC---CCeEEE-EeCCCChhhhcCCCcEEEEcC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT---GAVVRG-FLGQPQLENALTGMDLVIIPA 96 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~---~~~v~~-~~~t~dl~~al~~ADiVii~a 96 (369)
|||+|+|+ |.+|+.++..|.+.+. +|.++|.+..... .+..... ...... ...+++..+ ++++|+||++.
T Consensus 1 m~I~IiG~-G~~G~~~a~~L~~~g~--~V~~~~r~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~d~vila~ 74 (304)
T PRK06522 1 MKIAILGA-GAIGGLFGAALAQAGH--DVTLVARRGAHLD--ALNENGLRLEDGEITVPVLAADDPAE-LGPQDLVILAV 74 (304)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC--eEEEEECChHHHH--HHHHcCCcccCCceeecccCCCChhH-cCCCCEEEEec
Confidence 68999999 9999999999998887 9999998641111 1111000 011111 011345544 49999999985
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhh-CCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEE-Eechhc
Q 017551 97 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKC-CPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLL-GVTMLD 169 (369)
Q Consensus 97 g~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kvi-G~t~Ld 169 (369)
... -..++++.+..+ .++..|+...|.++....+ .+. +++.+++ |++...
T Consensus 75 k~~----------------~~~~~~~~l~~~l~~~~~iv~~~nG~~~~~~l-----~~~--~~~~~i~~~~~~~~ 126 (304)
T PRK06522 75 KAY----------------QLPAALPSLAPLLGPDTPVLFLQNGVGHLEEL-----AAY--IGPERVLGGVVTHA 126 (304)
T ss_pred ccc----------------cHHHHHHHHhhhcCCCCEEEEecCCCCcHHHH-----HHh--cCcccEEEEEEEEe
Confidence 211 123444455544 3667888889988765432 232 4555665 445443
No 93
>CHL00194 ycf39 Ycf39; Provisional
Probab=97.72 E-value=0.00014 Score=70.57 Aligned_cols=108 Identities=12% Similarity=0.059 Sum_probs=70.4
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEE-eCCCChhhhcCCCcEEEEcCCCC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGF-LGQPQLENALTGMDLVIIPAGVP 99 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~-~~t~dl~~al~~ADiVii~ag~p 99 (369)
|||.|+||+|++|+.++..|...++ +|+.++.+.... ..+.+... .-+... ....++.++++++|+||.+++..
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~g~--~V~~l~R~~~~~--~~l~~~~v-~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~ 75 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDEGY--QVRCLVRNLRKA--SFLKEWGA-ELVYGDLSLPETLPPSFKGVTAIIDASTSR 75 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC--eEEEEEcChHHh--hhHhhcCC-EEEECCCCCHHHHHHHHCCCCEEEECCCCC
Confidence 6999999999999999999999887 899998764221 11111110 111111 11245678899999999986532
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551 100 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 137 (369)
Q Consensus 100 ~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 137 (369)
.. ...++...|......+++++++..-+- ++.+|
T Consensus 76 ~~---~~~~~~~~~~~~~~~l~~aa~~~gvkr-~I~~S 109 (317)
T CHL00194 76 PS---DLYNAKQIDWDGKLALIEAAKAAKIKR-FIFFS 109 (317)
T ss_pred CC---CccchhhhhHHHHHHHHHHHHHcCCCE-EEEec
Confidence 11 122345667788888888888876553 44444
No 94
>PLN02214 cinnamoyl-CoA reductase
Probab=97.72 E-value=0.00064 Score=66.87 Aligned_cols=111 Identities=14% Similarity=0.053 Sum_probs=75.1
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch--h-HHHHhhcccCCCeEEEEe----CCCChhhhcCCCcE
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--G-VTADISHMDTGAVVRGFL----GQPQLENALTGMDL 91 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~--g-~~~dL~~~~~~~~v~~~~----~t~dl~~al~~ADi 91 (369)
+.++|.|+||+|++|++++..|+.++. +|+.++.+... . ....+... ..++..+. ...++.++++++|+
T Consensus 9 ~~~~vlVTGatGfIG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~d~ 84 (342)
T PLN02214 9 AGKTVCVTGAGGYIASWIVKILLERGY--TVKGTVRNPDDPKNTHLRELEGG--KERLILCKADLQDYEALKAAIDGCDG 84 (342)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcC--EEEEEeCCchhhhHHHHHHhhCC--CCcEEEEecCcCChHHHHHHHhcCCE
Confidence 456899999999999999999999987 88888875421 1 11122111 11233221 12346678899999
Q ss_pred EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551 92 VIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 137 (369)
Q Consensus 92 Vii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 137 (369)
||.+|+... ....+.+..|+.....+.+.+.+...+- ++++|
T Consensus 85 Vih~A~~~~---~~~~~~~~~nv~gt~~ll~aa~~~~v~r-~V~~S 126 (342)
T PLN02214 85 VFHTASPVT---DDPEQMVEPAVNGAKFVINAAAEAKVKR-VVITS 126 (342)
T ss_pred EEEecCCCC---CCHHHHHHHHHHHHHHHHHHHHhcCCCE-EEEec
Confidence 999997542 2345677889999999999988775443 44443
No 95
>PTZ00345 glycerol-3-phosphate dehydrogenase; Provisional
Probab=97.72 E-value=0.00031 Score=70.02 Aligned_cols=98 Identities=15% Similarity=0.263 Sum_probs=66.1
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCC-----CcEEEEEeCCCc---hhHHHHhhc--cc--------CCCeEEEEeCCCC
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPL-----VSVLHLYDVVNT---PGVTADISH--MD--------TGAVVRGFLGQPQ 81 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~-----~~el~L~D~~~~---~g~~~dL~~--~~--------~~~~v~~~~~t~d 81 (369)
++||+|||+ |.-|+++|..|..++. ..+|.||..++. ...+.++.+ .. .+.++.. ++|
T Consensus 11 ~~ki~ViGa-G~wGtAlA~~l~~n~~~~~~~~~~V~lw~~~~~~~~~~~~~~in~~~~N~~ylp~~~Lp~ni~~---tsd 86 (365)
T PTZ00345 11 PLKVSVIGS-GNWGSAISKVVGENTQRNYIFHNEVRMWVLEEIVEGEKLSDIINTKHENVKYLPGIKLPDNIVA---VSD 86 (365)
T ss_pred CCeEEEECC-CHHHHHHHHHHHhcCCcccCCCCeEEEEEecccccchHHHHHHHhcCCCcccCCCCcCCCceEE---ecC
Confidence 479999999 9999999999998862 238999988762 223444442 21 1234443 468
Q ss_pred hhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhh--hC-CCeEEEEec
Q 017551 82 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAK--CC-PNATVNLIS 137 (369)
Q Consensus 82 l~~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~--~~-p~a~viv~t 137 (369)
+.+++++||+||++. | ...++++++++.. +- +++++|.++
T Consensus 87 l~eav~~aDiIvlAV--P--------------sq~l~~vl~~l~~~~~l~~~~~iIS~a 129 (365)
T PTZ00345 87 LKEAVEDADLLIFVI--P--------------HQFLESVLSQIKENNNLKKHARAISLT 129 (365)
T ss_pred HHHHHhcCCEEEEEc--C--------------hHHHHHHHHHhccccccCCCCEEEEEe
Confidence 888999999999873 3 2446677777775 33 344555443
No 96
>PRK12921 2-dehydropantoate 2-reductase; Provisional
Probab=97.70 E-value=0.00025 Score=68.28 Aligned_cols=123 Identities=11% Similarity=0.130 Sum_probs=72.6
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHH--hhcccCCCeEEE-EeCCCChhhhcCCCcEEEEcCC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTAD--ISHMDTGAVVRG-FLGQPQLENALTGMDLVIIPAG 97 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~d--L~~~~~~~~v~~-~~~t~dl~~al~~ADiVii~ag 97 (369)
|||+|+|+ |.+|+.++..|...+. +|.+++..+......+ +........... ....++.+++.+++|+||++..
T Consensus 1 mkI~IiG~-G~iG~~~a~~L~~~g~--~V~~~~r~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vilavk 77 (305)
T PRK12921 1 MRIAVVGA-GAVGGTFGGRLLEAGR--DVTFLVRPKRAKALRERGLVIRSDHGDAVVPGPVITDPEELTGPFDLVILAVK 77 (305)
T ss_pred CeEEEECC-CHHHHHHHHHHHHCCC--ceEEEecHHHHHHHHhCCeEEEeCCCeEEecceeecCHHHccCCCCEEEEEec
Confidence 69999999 9999999999999887 8999998221111111 100000011110 0012455555689999999852
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHhhh-CCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEE-Eechhc
Q 017551 98 VPRKPGMTRDDLFNINAGIVRTLCEGIAKC-CPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLL-GVTMLD 169 (369)
Q Consensus 98 ~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kvi-G~t~Ld 169 (369)
.+ -..++.+.+..+ .++..|+...|.++.... +.+. +|.++++ |++...
T Consensus 78 ~~----------------~~~~~~~~l~~~~~~~~~ii~~~nG~~~~~~-----l~~~--~~~~~v~~g~~~~~ 128 (305)
T PRK12921 78 AY----------------QLDAAIPDLKPLVGEDTVIIPLQNGIGQLEQ-----LEPY--FGRERVLGGVVFIS 128 (305)
T ss_pred cc----------------CHHHHHHHHHhhcCCCCEEEEeeCCCChHHH-----HHHh--CCcccEEEEEEEEE
Confidence 21 133444555544 356778888898875432 2333 6667777 445444
No 97
>PLN02778 3,5-epimerase/4-reductase
Probab=97.68 E-value=0.00069 Score=65.45 Aligned_cols=92 Identities=23% Similarity=0.197 Sum_probs=63.7
Q ss_pred CCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhc--CCCcEEEE
Q 017551 17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENAL--TGMDLVII 94 (369)
Q Consensus 17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al--~~ADiVii 94 (369)
+...|||.|+||+|++|++++..|..++. ++++...+. .+. ..+..++ .++|+||.
T Consensus 6 ~~~~~kiLVtG~tGfiG~~l~~~L~~~g~--~V~~~~~~~--------~~~------------~~v~~~l~~~~~D~ViH 63 (298)
T PLN02778 6 GSATLKFLIYGKTGWIGGLLGKLCQEQGI--DFHYGSGRL--------ENR------------ASLEADIDAVKPTHVFN 63 (298)
T ss_pred CCCCCeEEEECCCCHHHHHHHHHHHhCCC--EEEEecCcc--------CCH------------HHHHHHHHhcCCCEEEE
Confidence 44568999999999999999999998887 766432211 100 0011122 26899999
Q ss_pred cCCCCCCCC-----CCHHHHHHHHHHHHHHHHHHHhhhCCC
Q 017551 95 PAGVPRKPG-----MTRDDLFNINAGIVRTLCEGIAKCCPN 130 (369)
Q Consensus 95 ~ag~p~k~g-----~~r~~~~~~N~~i~~~i~~~i~~~~p~ 130 (369)
+|+....+. ....+.+..|+.....+++.+++....
T Consensus 64 ~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~ 104 (298)
T PLN02778 64 AAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERGLV 104 (298)
T ss_pred CCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 998643222 235677889999999999999887543
No 98
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=97.68 E-value=0.00035 Score=67.22 Aligned_cols=111 Identities=18% Similarity=0.199 Sum_probs=73.7
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEE-eCCCChhhhcCCCcEEEEcCCCC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGF-LGQPQLENALTGMDLVIIPAGVP 99 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~-~~t~dl~~al~~ADiVii~ag~p 99 (369)
|||.|+||+|++|+.++..|...+. +|+++|.+.... .++.+... ..+... ....++.++++++|+||..++..
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~--~~~~~~~~-~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~ 75 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGE--EVRVLVRPTSDR--RNLEGLDV-EIVEGDLRDPASLRKAVAGCRALFHVAADY 75 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCC--EEEEEEecCccc--cccccCCc-eEEEeeCCCHHHHHHHHhCCCEEEEeceec
Confidence 5899999999999999999999887 899999865221 11111110 111111 11234567788999999988653
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551 100 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 137 (369)
Q Consensus 100 ~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 137 (369)
.............|+.....+++.+.+..-. .+++.|
T Consensus 76 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~S 112 (328)
T TIGR03466 76 RLWAPDPEEMYAANVEGTRNLLRAALEAGVE-RVVYTS 112 (328)
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHHHhCCC-eEEEEe
Confidence 2223445667788999999999988876533 344444
No 99
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=97.68 E-value=0.00036 Score=66.55 Aligned_cols=113 Identities=18% Similarity=0.105 Sum_probs=72.6
Q ss_pred EEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc---hhHHHHhhcccCCCeEEEEe----CCCChhhhcCC--CcEE
Q 017551 22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMDTGAVVRGFL----GQPQLENALTG--MDLV 92 (369)
Q Consensus 22 KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~---~g~~~dL~~~~~~~~v~~~~----~t~dl~~al~~--ADiV 92 (369)
||.|+||+|++|+.++..|+..+...+|+++|.... .....++.. ...+..+. ...++.+++++ +|+|
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~d~v 77 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLED---NPRYRFVKGDIGDRELVSRLFTEHQPDAV 77 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhcc---CCCcEEEEcCCcCHHHHHHHHhhcCCCEE
Confidence 589999999999999998887763348888886431 111122221 11222221 12345566776 8999
Q ss_pred EEcCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551 93 IIPAGVPRK--PGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 137 (369)
Q Consensus 93 ii~ag~p~k--~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 137 (369)
|..|+.... .......++..|+.....+++.+.+...+..++.+|
T Consensus 78 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~S 124 (317)
T TIGR01181 78 VHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHIS 124 (317)
T ss_pred EEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEee
Confidence 999875321 122344567889999999999988775555566554
No 100
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=97.66 E-value=0.00062 Score=66.89 Aligned_cols=117 Identities=17% Similarity=0.069 Sum_probs=73.2
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch--hHHHHhhcccCCCeEEEE-eCCCChhhhcCC--CcEEEE
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGF-LGQPQLENALTG--MDLVII 94 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~--g~~~dL~~~~~~~~v~~~-~~t~dl~~al~~--ADiVii 94 (369)
.++|.|+||+|++|++++..|++.+. +|+.+|.+... .....+........+... ....++.+.+++ .|+||.
T Consensus 4 ~k~ilItGatG~IG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih 81 (349)
T TIGR02622 4 GKKVLVTGHTGFKGSWLSLWLLELGA--EVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFH 81 (349)
T ss_pred CCEEEEECCCChhHHHHHHHHHHCCC--EEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEE
Confidence 47999999999999999999999887 89999976621 111112110000011111 111234455554 599999
Q ss_pred cCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecC
Q 017551 95 PAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN 138 (369)
Q Consensus 95 ~ag~p~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tN 138 (369)
+|+.+... .......+..|+.....+.+.+.+.+....++++|.
T Consensus 82 ~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS 127 (349)
T TIGR02622 82 LAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTS 127 (349)
T ss_pred CCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEec
Confidence 98854321 123456678899999999999876653335666554
No 101
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=97.66 E-value=0.00035 Score=67.94 Aligned_cols=80 Identities=23% Similarity=0.286 Sum_probs=60.6
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV 98 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~ 98 (369)
..|||+|||+ |.+|++++..|...++ +|.+||.+.. .++.+++++||+||++.
T Consensus 3 ~~m~I~iiG~-G~~G~~lA~~l~~~G~--~V~~~~r~~~----------------------~~~~~~~~~advvi~~v-- 55 (308)
T PRK14619 3 QPKTIAILGA-GAWGSTLAGLASANGH--RVRVWSRRSG----------------------LSLAAVLADADVIVSAV-- 55 (308)
T ss_pred CCCEEEEECc-cHHHHHHHHHHHHCCC--EEEEEeCCCC----------------------CCHHHHHhcCCEEEEEC--
Confidence 3579999999 9999999999999998 9999998641 24567889999999984
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhhh--CCCeEEEEecCC
Q 017551 99 PRKPGMTRDDLFNINAGIVRTLCEGIAKC--CPNATVNLISNP 139 (369)
Q Consensus 99 p~k~g~~r~~~~~~N~~i~~~i~~~i~~~--~p~a~viv~tNP 139 (369)
| ...++++++.+..+ .++.+++..|+.
T Consensus 56 p--------------~~~~~~v~~~l~~~~~~~~~ivi~~s~g 84 (308)
T PRK14619 56 S--------------MKGVRPVAEQVQALNLPPETIIVTATKG 84 (308)
T ss_pred C--------------hHHHHHHHHHHHHhcCCCCcEEEEeCCc
Confidence 2 12344555666543 467777777773
No 102
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated
Probab=97.65 E-value=0.00044 Score=67.12 Aligned_cols=100 Identities=22% Similarity=0.355 Sum_probs=64.7
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch--hHHHHhhccc------CCCeEEEEeCCCChhhhcCCCcEE
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMD------TGAVVRGFLGQPQLENALTGMDLV 92 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~--g~~~dL~~~~------~~~~v~~~~~t~dl~~al~~ADiV 92 (369)
|||+|||+ |.+|+.++..|+..+. ++.+||.+... ....+..+.. ....+.. ++++.++++++|+|
T Consensus 2 mkI~iiG~-G~mG~~~a~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~D~v 75 (325)
T PRK00094 2 MKIAVLGA-GSWGTALAIVLARNGH--DVTLWARDPEQAAEINADRENPRYLPGIKLPDNLRA---TTDLAEALADADLI 75 (325)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC--EEEEEECCHHHHHHHHHcCcccccCCCCcCCCCeEE---eCCHHHHHhCCCEE
Confidence 69999999 9999999999999887 89999997522 1111110100 0112332 34666788999999
Q ss_pred EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCC
Q 017551 93 IIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNS 142 (369)
Q Consensus 93 ii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~ 142 (369)
|++... ..+.++.+.+..+. |+.+++..+|-++.
T Consensus 76 i~~v~~----------------~~~~~v~~~l~~~~~~~~~vi~~~ngv~~ 110 (325)
T PRK00094 76 LVAVPS----------------QALREVLKQLKPLLPPDAPIVWATKGIEP 110 (325)
T ss_pred EEeCCH----------------HHHHHHHHHHHhhcCCCCEEEEEeecccC
Confidence 998410 12345555566554 67777878775543
No 103
>PRK14620 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=97.64 E-value=0.0004 Score=67.92 Aligned_cols=117 Identities=17% Similarity=0.378 Sum_probs=72.1
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhc----cc------CCCeEEEEeCCCChhhhc-CCC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISH----MD------TGAVVRGFLGQPQLENAL-TGM 89 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~----~~------~~~~v~~~~~t~dl~~al-~~A 89 (369)
|||+|||| |.+|+.++..|..++. +|.||+.++.. +..+.. .. ....++. ++|+.+++ .++
T Consensus 1 MkI~IiGa-Ga~G~ala~~L~~~g~--~V~l~~r~~~~--~~~i~~~~~~~~~~~~~~~~~~i~~---~~~~~~~~~~~~ 72 (326)
T PRK14620 1 MKISILGA-GSFGTAIAIALSSKKI--SVNLWGRNHTT--FESINTKRKNLKYLPTCHLPDNISV---KSAIDEVLSDNA 72 (326)
T ss_pred CEEEEECc-CHHHHHHHHHHHHCCC--eEEEEecCHHH--HHHHHHcCCCcccCCCCcCCCCeEE---eCCHHHHHhCCC
Confidence 68999999 9999999999999987 89999997521 112221 10 1123333 35666776 589
Q ss_pred cEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhh-h-CCCeEEEEecCCCCChh-HHHHHHHHHhCCCCCCcEE
Q 017551 90 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAK-C-CPNATVNLISNPVNSTV-PIAAEVFKKAGTYDPKKLL 163 (369)
Q Consensus 90 DiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~-~-~p~a~viv~tNPv~~~t-~i~ae~~~~~~~~~~~kvi 163 (369)
|+||++. | ..-+.++++.+.. + .++..++..+|=.+.-+ .+..+.+.+. +|..++.
T Consensus 73 Dliiiav--k--------------s~~~~~~l~~l~~~~l~~~~~vv~~~nGi~~~~~~~~~~~l~~~--~~~~~~~ 131 (326)
T PRK14620 73 TCIILAV--P--------------TQQLRTICQQLQDCHLKKNTPILICSKGIEKSSLKFPSEIVNEI--LPNNPIA 131 (326)
T ss_pred CEEEEEe--C--------------HHHHHHHHHHHHHhcCCCCCEEEEEEcCeeCCCCccHHHHHHHH--cCCCceE
Confidence 9999984 1 2234455555554 3 36777777888764310 1123445554 4555554
No 104
>TIGR03376 glycerol3P_DH glycerol-3-phosphate dehydrogenase (NAD(+)). Members of this protein family are the eukaryotic enzyme, glycerol-3-phosphate dehydrogenase (NAD(+)) (EC 1.1.1.8). Enzymatic activity for 1.1.1.8 is defined as sn-glycerol 3-phosphate + NAD(+) = glycerone phosphate + NADH. Note the very similar reactions of enzymes defined as EC 1.1.1.94 and 1.1.99.5, assigned to families of proteins in the bacteria.
Probab=97.63 E-value=0.00044 Score=68.40 Aligned_cols=96 Identities=22% Similarity=0.385 Sum_probs=62.8
Q ss_pred EEEEEcCCCccHHHHHHHHHhCC------CCcEEEEEeCCC---chhHHHHhh--ccc--C------CCeEEEEeCCCCh
Q 017551 22 KVAILGAAGGIGQPLAMLMKINP------LVSVLHLYDVVN---TPGVTADIS--HMD--T------GAVVRGFLGQPQL 82 (369)
Q Consensus 22 KI~IiGA~G~vGs~la~~l~~~~------~~~el~L~D~~~---~~g~~~dL~--~~~--~------~~~v~~~~~t~dl 82 (369)
||+|||| |..|+++|..|..++ ...+|.||..++ -......+. |.. . +.+++. ++|+
T Consensus 1 kI~VIGa-G~wGtALA~~la~ng~~~~~~~~~~V~lw~~~~~~~~~~~~~~in~~~~n~~ylpgi~Lp~~i~a---t~dl 76 (342)
T TIGR03376 1 RVAVVGS-GNWGTAIAKIVAENARALPELFEESVRMWVFEEEIEGRNLTEIINTTHENVKYLPGIKLPANLVA---VPDL 76 (342)
T ss_pred CEEEECc-CHHHHHHHHHHHHcCCcccccCCceEEEEEeccccCCHHHHHHHHhcCCCccccCCCcCCCCeEE---ECCH
Confidence 7999999 999999999999877 124999999843 122222232 221 1 223443 4688
Q ss_pred hhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEec
Q 017551 83 ENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLIS 137 (369)
Q Consensus 83 ~~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~t 137 (369)
++++++||+||++. | ...++++++++..+- ++..++.+|
T Consensus 77 ~eal~~ADiIIlAV--P--------------s~~i~~vl~~l~~~l~~~~~iVs~t 116 (342)
T TIGR03376 77 VEAAKGADILVFVI--P--------------HQFLEGICKQLKGHVKPNARAISCI 116 (342)
T ss_pred HHHHhcCCEEEEEC--C--------------hHHHHHHHHHHHhhcCCCCEEEEEe
Confidence 89999999999983 3 244556666666553 344555554
No 105
>PRK15182 Vi polysaccharide biosynthesis protein TviB; Provisional
Probab=97.63 E-value=0.00082 Score=68.40 Aligned_cols=120 Identities=14% Similarity=0.148 Sum_probs=73.0
Q ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccC------------CCeEEEEeCCCChhhh
Q 017551 18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT------------GAVVRGFLGQPQLENA 85 (369)
Q Consensus 18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~------------~~~v~~~~~t~dl~~a 85 (369)
..+|||+|||- |+||.++|..|+. ++ +|+.||+++.+ +..|..... ...+.. +++. ++
T Consensus 4 ~~~mkI~vIGl-GyvGlpmA~~la~-~~--~V~g~D~~~~~--ve~l~~G~~~~~e~~~~~l~~~g~l~~---t~~~-~~ 73 (425)
T PRK15182 4 IDEVKIAIIGL-GYVGLPLAVEFGK-SR--QVVGFDVNKKR--ILELKNGVDVNLETTEEELREARYLKF---TSEI-EK 73 (425)
T ss_pred CCCCeEEEECc-CcchHHHHHHHhc-CC--EEEEEeCCHHH--HHHHHCcCCCCCCCCHHHHHhhCCeeE---EeCH-HH
Confidence 45689999999 9999999999877 45 99999998722 222331110 112232 3454 57
Q ss_pred cCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEe-cCCCCChhHHHHHHHHH
Q 017551 86 LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLI-SNPVNSTVPIAAEVFKK 153 (369)
Q Consensus 86 l~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~-tNPv~~~t~i~ae~~~~ 153 (369)
+++||++|++.+.|.+.... ..+.-+....+.|.++. +..++|+- |-|.+....++...+.+
T Consensus 74 ~~~advvii~Vptp~~~~~~------~dl~~v~~a~~~i~~~l~~g~lVI~~STv~pgtt~~~~~~~l~~ 137 (425)
T PRK15182 74 IKECNFYIITVPTPINTYKQ------PDLTPLIKASETVGTVLNRGDIVVYESTVYPGCTEEECVPILAR 137 (425)
T ss_pred HcCCCEEEEEcCCCCCCCCC------cchHHHHHHHHHHHHhcCCCCEEEEecCCCCcchHHHHHHHHHh
Confidence 89999999998888643211 12233334444555554 34544443 67777665444444443
No 106
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=97.61 E-value=0.00026 Score=70.55 Aligned_cols=114 Identities=15% Similarity=-0.008 Sum_probs=72.1
Q ss_pred CCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeE-EEE-eCCCChhhhcCCCcEEEE
Q 017551 17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVV-RGF-LGQPQLENALTGMDLVII 94 (369)
Q Consensus 17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v-~~~-~~t~dl~~al~~ADiVii 94 (369)
....|||.|+||+|+||++++..|...++ +|+.+|..... ...+ ......+ ... ....++..+++++|+||.
T Consensus 18 ~~~~~~IlVtGgtGfIG~~l~~~L~~~G~--~V~~v~r~~~~-~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih 91 (370)
T PLN02695 18 PSEKLRICITGAGGFIASHIARRLKAEGH--YIIASDWKKNE-HMSE---DMFCHEFHLVDLRVMENCLKVTKGVDHVFN 91 (370)
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHhCCC--EEEEEEecccc-cccc---ccccceEEECCCCCHHHHHHHHhCCCEEEE
Confidence 45668999999999999999999999887 99999975311 0000 0000011 110 001224456789999999
Q ss_pred cCCCCCCCC---CCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551 95 PAGVPRKPG---MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 137 (369)
Q Consensus 95 ~ag~p~k~g---~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 137 (369)
+|+.....+ .........|+.....+++.+.+...+. ++++|
T Consensus 92 ~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~-~V~~S 136 (370)
T PLN02695 92 LAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKR-FFYAS 136 (370)
T ss_pred cccccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCCE-EEEeC
Confidence 986431111 1223346789999999999988776554 44444
No 107
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=97.60 E-value=0.00083 Score=68.17 Aligned_cols=112 Identities=21% Similarity=0.210 Sum_probs=69.6
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhccc--------------CCCeEEEEeCCCChhhh
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD--------------TGAVVRGFLGQPQLENA 85 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~--------------~~~~v~~~~~t~dl~~a 85 (369)
.+||+|||. |.||.++|..|+..|+ +|+.||+++.+-......... ....+.. +++
T Consensus 3 ~~kI~VIGl-G~~G~~~A~~La~~G~--~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~l~~~~~~g~l~~---~~~---- 72 (415)
T PRK11064 3 FETISVIGL-GYIGLPTAAAFASRQK--QVIGVDINQHAVDTINRGEIHIVEPDLDMVVKTAVEGGYLRA---TTT---- 72 (415)
T ss_pred ccEEEEECc-chhhHHHHHHHHhCCC--EEEEEeCCHHHHHHHHCCCCCcCCCCHHHHHHHHhhcCceee---ecc----
Confidence 479999999 9999999999999997 999999987321111100000 0112222 222
Q ss_pred cCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEe-cCCCCChhHHH
Q 017551 86 LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLI-SNPVNSTVPIA 147 (369)
Q Consensus 86 l~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~-tNPv~~~t~i~ 147 (369)
+++||+||++...|.++.. ..++..+.+.++.+..+. ++.+||+- |.|.+..-.+.
T Consensus 73 ~~~aDvvii~vptp~~~~~------~~dl~~v~~~~~~i~~~l~~g~iVI~~STv~pgtt~~~~ 130 (415)
T PRK11064 73 PEPADAFLIAVPTPFKGDH------EPDLTYVEAAAKSIAPVLKKGDLVILESTSPVGATEQMA 130 (415)
T ss_pred cccCCEEEEEcCCCCCCCC------CcChHHHHHHHHHHHHhCCCCCEEEEeCCCCCCHHHHHH
Confidence 3589999999877754321 122344555556666665 45555554 56777765554
No 108
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=97.59 E-value=0.00094 Score=58.97 Aligned_cols=93 Identities=25% Similarity=0.295 Sum_probs=66.2
Q ss_pred EEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeC-C---CChhhhcCCCcEEEEcCCC
Q 017551 23 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG-Q---PQLENALTGMDLVIIPAGV 98 (369)
Q Consensus 23 I~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~-t---~dl~~al~~ADiVii~ag~ 98 (369)
|+|+||+|++|+.++..|...+. +|+++-.+..+.. + ...++.+.+ . +++.++++++|.||.++|.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~--~V~~~~R~~~~~~--~------~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~ 70 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGH--EVTALVRSPSKAE--D------SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGP 70 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTS--EEEEEESSGGGHH--H------CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHS
T ss_pred eEEECCCChHHHHHHHHHHHCCC--EEEEEecCchhcc--c------ccccccceeeehhhhhhhhhhhhcchhhhhhhh
Confidence 78999999999999999999996 9999988753211 1 233443322 1 2457889999999999866
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551 99 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 137 (369)
Q Consensus 99 p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 137 (369)
+.+ ....++.+.+.+++.... .++++|
T Consensus 71 ~~~-----------~~~~~~~~~~a~~~~~~~-~~v~~s 97 (183)
T PF13460_consen 71 PPK-----------DVDAAKNIIEAAKKAGVK-RVVYLS 97 (183)
T ss_dssp TTT-----------HHHHHHHHHHHHHHTTSS-EEEEEE
T ss_pred hcc-----------cccccccccccccccccc-cceeee
Confidence 543 167778888888876544 344444
No 109
>PRK08229 2-dehydropantoate 2-reductase; Provisional
Probab=97.58 E-value=0.00084 Score=65.85 Aligned_cols=100 Identities=19% Similarity=0.198 Sum_probs=62.5
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhh-cccC---------CCeEEEEeCCCChhhhcCCCc
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADIS-HMDT---------GAVVRGFLGQPQLENALTGMD 90 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~-~~~~---------~~~v~~~~~t~dl~~al~~AD 90 (369)
|||+|||+ |.+|+.++..|...+. +|.++|.+.......... +... ...+.. ++++ ++++++|
T Consensus 3 mkI~IiG~-G~mG~~~A~~L~~~G~--~V~~~~r~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~D 75 (341)
T PRK08229 3 ARICVLGA-GSIGCYLGGRLAAAGA--DVTLIGRARIGDELRAHGLTLTDYRGRDVRVPPSAIAF---STDP-AALATAD 75 (341)
T ss_pred ceEEEECC-CHHHHHHHHHHHhcCC--cEEEEecHHHHHHHHhcCceeecCCCcceecccceeEe---ccCh-hhccCCC
Confidence 69999999 9999999999999987 899999864111111000 0000 001221 3455 6789999
Q ss_pred EEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhh-CCCeEEEEecCCCCCh
Q 017551 91 LVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKC-CPNATVNLISNPVNST 143 (369)
Q Consensus 91 iVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tNPv~~~ 143 (369)
+||++...+. ..++++.+..+ .++.+++..+|..+..
T Consensus 76 ~vil~vk~~~----------------~~~~~~~l~~~~~~~~iii~~~nG~~~~ 113 (341)
T PRK08229 76 LVLVTVKSAA----------------TADAAAALAGHARPGAVVVSFQNGVRNA 113 (341)
T ss_pred EEEEEecCcc----------------hHHHHHHHHhhCCCCCEEEEeCCCCCcH
Confidence 9999853221 12334445544 3567777788887654
No 110
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=97.57 E-value=0.0019 Score=62.44 Aligned_cols=106 Identities=16% Similarity=0.106 Sum_probs=67.6
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc-hhHHHHhhcc-cCCCeEEEEe----CCCChhhhcCCCcEEE
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHM-DTGAVVRGFL----GQPQLENALTGMDLVI 93 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~-~g~~~dL~~~-~~~~~v~~~~----~t~dl~~al~~ADiVi 93 (369)
.++|.|+||+|++|++++..|+..+. +|++...+.. ......+... .....+..+. ...++.++++++|+||
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi 82 (322)
T PLN02986 5 GKLVCVTGASGYIASWIVKLLLLRGY--TVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVF 82 (322)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEE
Confidence 46999999999999999999999887 7776554432 1111222111 1112333321 1234667789999999
Q ss_pred EcCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHhhh
Q 017551 94 IPAGVPRK-PGMTRDDLFNINAGIVRTLCEGIAKC 127 (369)
Q Consensus 94 i~ag~p~k-~g~~r~~~~~~N~~i~~~i~~~i~~~ 127 (369)
.+|+.... ......+++..|+.....+.+.+.+.
T Consensus 83 h~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~ 117 (322)
T PLN02986 83 HTASPVFFTVKDPQTELIDPALKGTINVLNTCKET 117 (322)
T ss_pred EeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhc
Confidence 99875321 11122345678898888998888765
No 111
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=97.56 E-value=0.00082 Score=66.14 Aligned_cols=114 Identities=18% Similarity=0.105 Sum_probs=69.6
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchh--HHHHhhcccCCCeEEEEeC----CCChhhhcCCCcEE
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTGAVVRGFLG----QPQLENALTGMDLV 92 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g--~~~dL~~~~~~~~v~~~~~----t~dl~~al~~ADiV 92 (369)
..+||.|+||+|++|++++..|.+.+. +|++++.+.... ...++.. ..++..+.+ ..++.+++++.|+|
T Consensus 9 ~~~~vLVtG~~GfIG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~d~V 83 (353)
T PLN02896 9 ATGTYCVTGATGYIGSWLVKLLLQRGY--TVHATLRDPAKSLHLLSKWKE---GDRLRLFRADLQEEGSFDEAVKGCDGV 83 (353)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHhhcc---CCeEEEEECCCCCHHHHHHHHcCCCEE
Confidence 457999999999999999999999887 888887654221 1112211 123333221 12345677899999
Q ss_pred EEcCCCCCCC---C-CCHH-----HHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551 93 IIPAGVPRKP---G-MTRD-----DLFNINAGIVRTLCEGIAKCCPNATVNLIS 137 (369)
Q Consensus 93 ii~ag~p~k~---g-~~r~-----~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 137 (369)
|.+|+.+... . .+.. ..+..|+.....+.+.+.++..-..++++|
T Consensus 84 ih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~S 137 (353)
T PLN02896 84 FHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTS 137 (353)
T ss_pred EECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEe
Confidence 9999864311 1 1122 233344577778888877653223455554
No 112
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=97.55 E-value=0.00082 Score=70.39 Aligned_cols=117 Identities=14% Similarity=0.086 Sum_probs=74.1
Q ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch--hHHHHhhcc-----c--CCCeEEEEe----CCCChhh
Q 017551 18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHM-----D--TGAVVRGFL----GQPQLEN 84 (369)
Q Consensus 18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~--g~~~dL~~~-----~--~~~~v~~~~----~t~dl~~ 84 (369)
+..+.|.|+||+|++|+.++..|+..|. +|++++.+... .....+.+. . ...++..+. ...++.+
T Consensus 78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~--~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~ 155 (576)
T PLN03209 78 KDEDLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGP 155 (576)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHH
Confidence 3456899999999999999999998887 89999887622 222222110 0 011233221 1134556
Q ss_pred hcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551 85 ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 137 (369)
Q Consensus 85 al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 137 (369)
++.++|+||..+|............+..|......+++.+.+..-. .||++|
T Consensus 156 aLggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVg-RIV~VS 207 (576)
T PLN03209 156 ALGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVN-HFILVT 207 (576)
T ss_pred HhcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCC-EEEEEc
Confidence 7899999999988654322222334566777888888888766544 455544
No 113
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=97.54 E-value=0.00069 Score=64.02 Aligned_cols=99 Identities=21% Similarity=0.254 Sum_probs=68.5
Q ss_pred EEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCCCCCC
Q 017551 23 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKP 102 (369)
Q Consensus 23 I~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~p~k~ 102 (369)
|.|+||+|++|++++..|+..+. +|+.++.+...... +.. ..+....+ .+..++++++|+||..++.+...
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~--~~~----~~~~~~~~-~~~~~~~~~~D~Vvh~a~~~~~~ 71 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGH--EVTILTRSPPAGAN--TKW----EGYKPWAP-LAESEALEGADAVINLAGEPIAD 71 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCC--EEEEEeCCCCCCCc--ccc----eeeecccc-cchhhhcCCCCEEEECCCCCccc
Confidence 57999999999999999998887 99999987621100 000 01111111 23457889999999999876533
Q ss_pred C-C---CHHHHHHHHHHHHHHHHHHHhhhCCC
Q 017551 103 G-M---TRDDLFNINAGIVRTLCEGIAKCCPN 130 (369)
Q Consensus 103 g-~---~r~~~~~~N~~i~~~i~~~i~~~~p~ 130 (369)
+ . ....+...|+...+.+.+.+.++...
T Consensus 72 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~ 103 (292)
T TIGR01777 72 KRWTEERKQEIRDSRIDTTRALVEAIAAAEQK 103 (292)
T ss_pred ccCCHHHHHHHHhcccHHHHHHHHHHHhcCCC
Confidence 2 1 23456678999999999999987643
No 114
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=97.53 E-value=0.00092 Score=64.95 Aligned_cols=113 Identities=18% Similarity=0.151 Sum_probs=71.0
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCC---hhhhcC--CCcEE
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENALT--GMDLV 92 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al~--~ADiV 92 (369)
|||.|+||+|++|++++..|+..+. +|+++|... .......+.+.. ..++..+. .-+| +.++++ ++|+|
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v 77 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQNGH--DVVILDNLCNSKRSVLPVIERLG-GKHPTFVEGDIRNEALLTEILHDHAIDTV 77 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHCCC--eEEEEecCCCchHhHHHHHHHhc-CCCceEEEccCCCHHHHHHHHhcCCCCEE
Confidence 6899999999999999999998887 899998643 111111122111 11111111 1122 334454 68999
Q ss_pred EEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551 93 IIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 137 (369)
Q Consensus 93 ii~ag~p~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 137 (369)
|..|+..... .....+.+..|+.....+++.+.+..-. .++++|
T Consensus 78 vh~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~S 123 (338)
T PRK10675 78 IHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVK-NLIFSS 123 (338)
T ss_pred EECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCC-EEEEec
Confidence 9998764321 1234567889999999999988876433 344444
No 115
>PRK08269 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=97.51 E-value=0.00057 Score=66.84 Aligned_cols=112 Identities=15% Similarity=0.135 Sum_probs=73.1
Q ss_pred cHHHHHHHHHhCCCCcEEEEEeCCCc--h--------hH--HHH----hhcc-c--------CCCeEEEEeCCCChhhhc
Q 017551 32 IGQPLAMLMKINPLVSVLHLYDVVNT--P--------GV--TAD----ISHM-D--------TGAVVRGFLGQPQLENAL 86 (369)
Q Consensus 32 vGs~la~~l~~~~~~~el~L~D~~~~--~--------g~--~~d----L~~~-~--------~~~~v~~~~~t~dl~~al 86 (369)
+|+.++..++..|+ +|+|+|++.. . +. +.+ +... . ...+++..+ +.|+++++
T Consensus 1 MG~giA~~~a~~G~--~V~l~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~-~~~~~~a~ 77 (314)
T PRK08269 1 MGQGIALAFAFAGH--DVTLIDFKPRDAAGWRALDAEARAEIERTLAALVALGRIDAAQADAVLARIAVVA-RDGAADAL 77 (314)
T ss_pred CcHHHHHHHHhCCC--eEEEEeCCcccchhhHHHHHHHHHHHHHHHHHHHHcCCCChhhHHHHHhCeEeec-CcchHHHh
Confidence 57889999999998 9999999871 1 11 111 1000 0 123555432 23467889
Q ss_pred CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCC-CeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe
Q 017551 87 TGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV 165 (369)
Q Consensus 87 ~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~ 165 (369)
++||+||.+. .+|..+.+.+..++.+.++ ++++ .||-..+...-+++ .. -.|.|++|+
T Consensus 78 ~~aD~ViEav--------------~E~~~~K~~~f~~l~~~~~~~~il--aSntS~~~~~~la~---~~--~~p~r~~g~ 136 (314)
T PRK08269 78 ADADLVFEAV--------------PEVLDAKREALRWLGRHVDADAII--ASTTSTFLVTDLQR---HV--AHPERFLNA 136 (314)
T ss_pred ccCCEEEECC--------------cCCHHHHHHHHHHHHhhCCCCcEE--EEccccCCHHHHHh---hc--CCcccEEEE
Confidence 9999999995 6678899999999999985 5543 88877764433322 22 135678887
Q ss_pred ch
Q 017551 166 TM 167 (369)
Q Consensus 166 t~ 167 (369)
..
T Consensus 137 Hf 138 (314)
T PRK08269 137 HW 138 (314)
T ss_pred ec
Confidence 43
No 116
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=97.50 E-value=0.00073 Score=64.47 Aligned_cols=100 Identities=17% Similarity=0.152 Sum_probs=68.2
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccC-CCeEEEEeCCCChhhhcCCC-cEEEEcCCC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT-GAVVRGFLGQPQLENALTGM-DLVIIPAGV 98 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~-~~~v~~~~~t~dl~~al~~A-DiVii~ag~ 98 (369)
++|.|+||+|++|++++..|.+.++ +|+.+|.......... .+... ...+.. .....+++++. |.||.+|+.
T Consensus 1 ~~ILVtG~tGfiG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~-~~~~~~~~d~~~---~~~~~~~~~~~~d~vih~aa~ 74 (314)
T COG0451 1 MRILVTGGAGFIGSHLVERLLAAGH--DVRGLDRLRDGLDPLL-SGVEFVVLDLTD---RDLVDELAKGVPDAVIHLAAQ 74 (314)
T ss_pred CeEEEEcCcccHHHHHHHHHHhCCC--eEEEEeCCCccccccc-cccceeeecccc---hHHHHHHHhcCCCEEEEcccc
Confidence 3599999999999999999999988 9999998652211111 11110 011110 12234556677 999999887
Q ss_pred CCCCCCCH---HHHHHHHHHHHHHHHHHHhh
Q 017551 99 PRKPGMTR---DDLFNINAGIVRTLCEGIAK 126 (369)
Q Consensus 99 p~k~g~~r---~~~~~~N~~i~~~i~~~i~~ 126 (369)
...++..+ .++...|+...+.+.++..+
T Consensus 75 ~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~ 105 (314)
T COG0451 75 SSVPDSNASDPAEFLDVNVDGTLNLLEAARA 105 (314)
T ss_pred CchhhhhhhCHHHHHHHHHHHHHHHHHHHHH
Confidence 65444332 35789999999999999998
No 117
>PLN02583 cinnamoyl-CoA reductase
Probab=97.49 E-value=0.0029 Score=60.88 Aligned_cols=114 Identities=15% Similarity=0.098 Sum_probs=72.5
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch----hHHHHhhcccCCCeEEEEe----CCCChhhhcCCCcE
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP----GVTADISHMDTGAVVRGFL----GQPQLENALTGMDL 91 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~----g~~~dL~~~~~~~~v~~~~----~t~dl~~al~~ADi 91 (369)
.++|.|+||+|++|+.++..|+.+|. +|++.+.+... ....++... ..++..+. ...++.+++.++|.
T Consensus 6 ~k~vlVTGatG~IG~~lv~~Ll~~G~--~V~~~~R~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~d~~~~~~~l~~~d~ 81 (297)
T PLN02583 6 SKSVCVMDASGYVGFWLVKRLLSRGY--TVHAAVQKNGETEIEKEIRGLSCE--EERLKVFDVDPLDYHSILDALKGCSG 81 (297)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCC--EEEEEEcCchhhhHHHHHHhcccC--CCceEEEEecCCCHHHHHHHHcCCCE
Confidence 45899999999999999999999998 88888764311 111222110 11233221 12345678999999
Q ss_pred EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551 92 VIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 137 (369)
Q Consensus 92 Vii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 137 (369)
|+..++.+........+++..|+.....+.+.+.+..--..+|++|
T Consensus 82 v~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~S 127 (297)
T PLN02583 82 LFCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTS 127 (297)
T ss_pred EEEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEec
Confidence 9876654322111235677889999999999987763112344443
No 118
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=97.48 E-value=0.001 Score=65.06 Aligned_cols=97 Identities=22% Similarity=0.281 Sum_probs=61.9
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcc------c--CCCeEEEEeCCCChhhhcCCCcE
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHM------D--TGAVVRGFLGQPQLENALTGMDL 91 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~------~--~~~~v~~~~~t~dl~~al~~ADi 91 (369)
.|||+|||+ |.+|+.++..|...+. +|.+||.+..+.....-.+. . ....+.. ++++.++++++|+
T Consensus 4 ~m~I~iIG~-G~mG~~ia~~L~~~G~--~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~---~~~~~e~~~~aD~ 77 (328)
T PRK14618 4 GMRVAVLGA-GAWGTALAVLAASKGV--PVRLWARRPEFAAALAAERENREYLPGVALPAELYP---TADPEEALAGADF 77 (328)
T ss_pred CCeEEEECc-CHHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEE---eCCHHHHHcCCCE
Confidence 579999999 9999999999999887 99999997522111111110 0 0111332 3467788899999
Q ss_pred EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCC
Q 017551 92 VIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN 141 (369)
Q Consensus 92 Vii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~ 141 (369)
||++. | .. .++++.+. ..|...++..+|..+
T Consensus 78 Vi~~v--~---~~-----------~~~~v~~~---l~~~~~vi~~~~Gi~ 108 (328)
T PRK14618 78 AVVAV--P---SK-----------ALRETLAG---LPRALGYVSCAKGLA 108 (328)
T ss_pred EEEEC--c---hH-----------HHHHHHHh---cCcCCEEEEEeeccc
Confidence 99984 1 10 12333333 236667787888654
No 119
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=97.48 E-value=0.00037 Score=67.18 Aligned_cols=99 Identities=18% Similarity=0.169 Sum_probs=65.4
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcC--CCcEEEEcCCC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALT--GMDLVIIPAGV 98 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~--~ADiVii~ag~ 98 (369)
|||.|+||+|++|++++..|...+ +++.+|.... ....|+.+ ...+.++++ ++|+||.+|+.
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g---~V~~~~~~~~-~~~~Dl~d------------~~~~~~~~~~~~~D~Vih~Aa~ 64 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG---NLIALDVHST-DYCGDFSN------------PEGVAETVRKIRPDVIVNAAAH 64 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC---CEEEeccccc-cccCCCCC------------HHHHHHHHHhcCCCEEEECCcc
Confidence 689999999999999999988776 4677776421 00011111 122445565 58999999876
Q ss_pred CCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551 99 PRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 137 (369)
Q Consensus 99 p~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 137 (369)
.... ..........|+.....+++.+.+.. ..++.+|
T Consensus 65 ~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g--~~~v~~S 103 (299)
T PRK09987 65 TAVDKAESEPEFAQLLNATSVEAIAKAANEVG--AWVVHYS 103 (299)
T ss_pred CCcchhhcCHHHHHHHHHHHHHHHHHHHHHcC--CeEEEEc
Confidence 4321 12334445789999999999998765 3455444
No 120
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=97.43 E-value=0.0011 Score=64.77 Aligned_cols=106 Identities=13% Similarity=0.013 Sum_probs=66.4
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch---hHHHHhh-cc--cCCCeEEEEeC----CCChhhhcCC--
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP---GVTADIS-HM--DTGAVVRGFLG----QPQLENALTG-- 88 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~---g~~~dL~-~~--~~~~~v~~~~~----t~dl~~al~~-- 88 (369)
++|.|+||+|++|++++..|+..+. +|+++|.+... .....+. +. .....+....+ ..++.+++++
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~ 78 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGY--EVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIK 78 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCC--EEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCC
Confidence 4899999999999999999999887 99999976421 1111121 00 00122332211 1234456664
Q ss_pred CcEEEEcCCCCCCC-C-CCHHHHHHHHHHHHHHHHHHHhhhC
Q 017551 89 MDLVIIPAGVPRKP-G-MTRDDLFNINAGIVRTLCEGIAKCC 128 (369)
Q Consensus 89 ADiVii~ag~p~k~-g-~~r~~~~~~N~~i~~~i~~~i~~~~ 128 (369)
.|+||.+|+..... . ......+..|+.....+.+.+.+.+
T Consensus 79 ~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~ 120 (343)
T TIGR01472 79 PTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLG 120 (343)
T ss_pred CCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhC
Confidence 59999999864322 1 1234445668778888888888764
No 121
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=97.42 E-value=0.00071 Score=59.58 Aligned_cols=91 Identities=18% Similarity=0.232 Sum_probs=58.5
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCCC
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP 99 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~p 99 (369)
++||++||. |.+|+.++..|...++ +|+.||++.. ...++.+.. .+. ..++.+++++||+|+..-
T Consensus 1 m~~Ig~IGl-G~mG~~~a~~L~~~g~--~v~~~d~~~~--~~~~~~~~g----~~~---~~s~~e~~~~~dvvi~~v--- 65 (163)
T PF03446_consen 1 MMKIGFIGL-GNMGSAMARNLAKAGY--EVTVYDRSPE--KAEALAEAG----AEV---ADSPAEAAEQADVVILCV--- 65 (163)
T ss_dssp -BEEEEE---SHHHHHHHHHHHHTTT--EEEEEESSHH--HHHHHHHTT----EEE---ESSHHHHHHHBSEEEE-S---
T ss_pred CCEEEEEch-HHHHHHHHHHHHhcCC--eEEeeccchh--hhhhhHHhh----hhh---hhhhhhHhhcccceEeec---
Confidence 369999999 9999999999999998 9999998752 222333321 333 245788999999999973
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHH--HhhhC-CCeEEEEec
Q 017551 100 RKPGMTRDDLFNINAGIVRTLCEG--IAKCC-PNATVNLIS 137 (369)
Q Consensus 100 ~k~g~~r~~~~~~N~~i~~~i~~~--i~~~~-p~a~viv~t 137 (369)
.+.+.++++... +.... +..++|..|
T Consensus 66 ------------~~~~~v~~v~~~~~i~~~l~~g~iiid~s 94 (163)
T PF03446_consen 66 ------------PDDDAVEAVLFGENILAGLRPGKIIIDMS 94 (163)
T ss_dssp ------------SSHHHHHHHHHCTTHGGGS-TTEEEEE-S
T ss_pred ------------ccchhhhhhhhhhHHhhccccceEEEecC
Confidence 123445566555 44444 445554443
No 122
>PLN02572 UDP-sulfoquinovose synthase
Probab=97.41 E-value=0.00045 Score=70.60 Aligned_cols=115 Identities=16% Similarity=0.153 Sum_probs=71.4
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc---hh------------HHHHh---hcccCCCeEEEEeC--
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PG------------VTADI---SHMDTGAVVRGFLG-- 78 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~---~g------------~~~dL---~~~~~~~~v~~~~~-- 78 (369)
+.+||.|+||+|+||++++..|+..+. +|+++|.... .. ....+ .+.. ...+..+.+
T Consensus 46 ~~k~VLVTGatGfIGs~Lv~~L~~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~v~~v~~Dl 122 (442)
T PLN02572 46 KKKKVMVIGGDGYCGWATALHLSKRGY--EVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVS-GKEIELYVGDI 122 (442)
T ss_pred cCCEEEEECCCcHHHHHHHHHHHHCCC--eEEEEeccccccccccccccccccccchHHHHHHHHHhh-CCcceEEECCC
Confidence 357999999999999999999999887 8999985321 00 00001 1100 112332211
Q ss_pred --CCChhhhcC--CCcEEEEcCCCCCCC-CC-C---HHHHHHHHHHHHHHHHHHHhhhCCCeEEEEe
Q 017551 79 --QPQLENALT--GMDLVIIPAGVPRKP-GM-T---RDDLFNINAGIVRTLCEGIAKCCPNATVNLI 136 (369)
Q Consensus 79 --t~dl~~al~--~ADiVii~ag~p~k~-g~-~---r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~ 136 (369)
..++.++++ ++|+||..|+....+ .. + ....+..|+.....+.+.+.+++....++.+
T Consensus 123 ~d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~ 189 (442)
T PLN02572 123 CDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKL 189 (442)
T ss_pred CCHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEE
Confidence 123445565 489999998654321 11 1 1234578999999999999888765545544
No 123
>PRK06249 2-dehydropantoate 2-reductase; Provisional
Probab=97.41 E-value=0.0013 Score=64.09 Aligned_cols=123 Identities=16% Similarity=0.242 Sum_probs=73.7
Q ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHH-Hhh--cccCC---CeEEEEeCCCChhhhcCCCcE
Q 017551 18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTA-DIS--HMDTG---AVVRGFLGQPQLENALTGMDL 91 (369)
Q Consensus 18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~-dL~--~~~~~---~~v~~~~~t~dl~~al~~ADi 91 (369)
...|||+|+|+ |.||..++..|...+. ++.+++.+....... .+. ..... ..+.. .++. ++...+|+
T Consensus 3 ~~~m~I~IiG~-GaiG~~lA~~L~~~g~--~V~~~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~---~~~~-~~~~~~D~ 75 (313)
T PRK06249 3 SETPRIGIIGT-GAIGGFYGAMLARAGF--DVHFLLRSDYEAVRENGLQVDSVHGDFHLPPVQA---YRSA-EDMPPCDW 75 (313)
T ss_pred CcCcEEEEECC-CHHHHHHHHHHHHCCC--eEEEEEeCCHHHHHhCCeEEEeCCCCeeecCceE---Ecch-hhcCCCCE
Confidence 45689999999 9999999999999887 999999875211111 000 00000 11222 1232 35788999
Q ss_pred EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhh-CCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe-chhc
Q 017551 92 VIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKC-CPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLD 169 (369)
Q Consensus 92 Vii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~-t~Ld 169 (369)
||++.-... ..++.+.+... .|++.++...|=.+.-- .+.+. +|+.+|++- +...
T Consensus 76 vilavK~~~----------------~~~~~~~l~~~~~~~~~iv~lqNG~~~~e-----~l~~~--~~~~~v~~g~~~~~ 132 (313)
T PRK06249 76 VLVGLKTTA----------------NALLAPLIPQVAAPDAKVLLLQNGLGVEE-----QLREI--LPAEHLLGGLCFIC 132 (313)
T ss_pred EEEEecCCC----------------hHhHHHHHhhhcCCCCEEEEecCCCCcHH-----HHHHH--CCCCcEEEEeeeEe
Confidence 999852211 12333344433 37888888889877543 23333 677887754 5544
Q ss_pred H
Q 017551 170 V 170 (369)
Q Consensus 170 ~ 170 (369)
.
T Consensus 133 a 133 (313)
T PRK06249 133 S 133 (313)
T ss_pred E
Confidence 3
No 124
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=97.37 E-value=0.0031 Score=67.64 Aligned_cols=120 Identities=15% Similarity=0.037 Sum_probs=73.3
Q ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeC-CCC---hhhhc--CCCcE
Q 017551 18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG-QPQ---LENAL--TGMDL 91 (369)
Q Consensus 18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~-t~d---l~~al--~~ADi 91 (369)
-+++||.|+||+|+||++++..|...+...+|+.+|..........+........++...+ -+| +...+ .++|+
T Consensus 4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~ 83 (668)
T PLN02260 4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGIDT 83 (668)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCCCE
Confidence 3568999999999999999999988743348999997431111111111111123443321 122 22222 68999
Q ss_pred EEEcCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551 92 VIIPAGVPRKPG--MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 137 (369)
Q Consensus 92 Vii~ag~p~k~g--~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 137 (369)
||.+|+...... ....++...|+.....+.+.+++...-..+|.+|
T Consensus 84 ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~S 131 (668)
T PLN02260 84 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVS 131 (668)
T ss_pred EEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEc
Confidence 999998653211 1234567889999999999988765323455544
No 125
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=97.31 E-value=0.002 Score=63.14 Aligned_cols=106 Identities=15% Similarity=0.100 Sum_probs=65.9
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEe----CCCChhhhcC--CCcEEEE
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL----GQPQLENALT--GMDLVII 94 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~----~t~dl~~al~--~ADiVii 94 (369)
|||.|+||+|++|+.++..|...+. ..++.+|.....+....+.+......+.... ...++.++++ ++|+||.
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih 79 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQ-DSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAVMH 79 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhCC-CeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCCEEEE
Confidence 6899999999999999999988774 2466677543111111111111011222111 1223445565 4899999
Q ss_pred cCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHhhh
Q 017551 95 PAGVPRK--PGMTRDDLFNINAGIVRTLCEGIAKC 127 (369)
Q Consensus 95 ~ag~p~k--~g~~r~~~~~~N~~i~~~i~~~i~~~ 127 (369)
+|+.... ......+.+..|+.....+++.+.++
T Consensus 80 ~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~ 114 (352)
T PRK10084 80 LAAESHVDRSITGPAAFIETNIVGTYVLLEAARNY 114 (352)
T ss_pred CCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHh
Confidence 9986432 12234567899999999999999875
No 126
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=97.30 E-value=0.0011 Score=62.88 Aligned_cols=95 Identities=23% Similarity=0.305 Sum_probs=67.3
Q ss_pred EEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCC--cEEEEcCCCC
Q 017551 22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGM--DLVIIPAGVP 99 (369)
Q Consensus 22 KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~A--DiVii~ag~p 99 (369)
||.|+||+|++|+.++..|...+. +|++++... .|+.+ ..++.++++++ |+||.+++.+
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~--~v~~~~r~~-----~d~~~------------~~~~~~~~~~~~~d~vi~~a~~~ 61 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGR--VVVALTSSQ-----LDLTD------------PEALERLLRAIRPDAVVNTAAYT 61 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCC--EEEEeCCcc-----cCCCC------------HHHHHHHHHhCCCCEEEECCccc
Confidence 689999999999999999998887 888888641 12221 12345667766 9999998865
Q ss_pred CCCC--CCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551 100 RKPG--MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 137 (369)
Q Consensus 100 ~k~g--~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 137 (369)
.... .........|+.....+++.+.+... .++++|
T Consensus 62 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~v~~S 99 (287)
T TIGR01214 62 DVDGAESDPEKAFAVNALAPQNLARAAARHGA--RLVHIS 99 (287)
T ss_pred cccccccCHHHHHHHHHHHHHHHHHHHHHcCC--eEEEEe
Confidence 3221 23455678889999999998877643 344444
No 127
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=97.29 E-value=0.0017 Score=63.42 Aligned_cols=109 Identities=16% Similarity=-0.016 Sum_probs=68.9
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc---hhHHHHhhcc--cCCCeEEEEe----CCCChhhhcCC-
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHM--DTGAVVRGFL----GQPQLENALTG- 88 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~---~g~~~dL~~~--~~~~~v~~~~----~t~dl~~al~~- 88 (369)
+.++|.|+||+|++|++++..|+..+. +|+++|.... ......+... .....+.... ...++.+++++
T Consensus 5 ~~~~vlVTGatGfiG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 82 (340)
T PLN02653 5 PRKVALITGITGQDGSYLTEFLLSKGY--EVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDI 82 (340)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHCCC--EEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHc
Confidence 457999999999999999999999987 8999987541 1111112110 0111222221 11234455654
Q ss_pred -CcEEEEcCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHhhhCC
Q 017551 89 -MDLVIIPAGVPRKPG--MTRDDLFNINAGIVRTLCEGIAKCCP 129 (369)
Q Consensus 89 -ADiVii~ag~p~k~g--~~r~~~~~~N~~i~~~i~~~i~~~~p 129 (369)
.|+||.+|+...... ......+..|+.....+++.+.++..
T Consensus 83 ~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~ 126 (340)
T PLN02653 83 KPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQ 126 (340)
T ss_pred CCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhcc
Confidence 599999998743221 12344557788888899998887764
No 128
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=97.29 E-value=0.0026 Score=58.21 Aligned_cols=100 Identities=18% Similarity=0.200 Sum_probs=61.4
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC-----chhH-------------H--HHhhcccCCCeEEEEe--
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-----TPGV-------------T--ADISHMDTGAVVRGFL-- 77 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~-----~~g~-------------~--~dL~~~~~~~~v~~~~-- 77 (369)
..||+|+|+ |.+|+.++..|+..|. .+|+|+|.+. +..+ + .-|.+.....++..+.
T Consensus 21 ~~~V~IvG~-GglGs~ia~~La~~Gv-g~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i~~~~~~ 98 (200)
T TIGR02354 21 QATVAICGL-GGLGSNVAINLARAGI-GKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEIEAYDEK 98 (200)
T ss_pred CCcEEEECc-CHHHHHHHHHHHHcCC-CEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEEEEeeee
Confidence 459999999 9999999999999885 5899999983 1100 0 1112211123333321
Q ss_pred -CCCChhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEe
Q 017551 78 -GQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI 136 (369)
Q Consensus 78 -~t~dl~~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~ 136 (369)
...++.+.++++|+||.+ .+|.+.-..+.+.+.+..+..+++..
T Consensus 99 i~~~~~~~~~~~~DlVi~a---------------~Dn~~~k~~l~~~~~~~~~~~~ii~~ 143 (200)
T TIGR02354 99 ITEENIDKFFKDADIVCEA---------------FDNAEAKAMLVNAVLEKYKDKYLIAA 143 (200)
T ss_pred CCHhHHHHHhcCCCEEEEC---------------CCCHHHHHHHHHHHHHHcCCCcEEEE
Confidence 123445568999999998 23444455555666655555544443
No 129
>PLN02240 UDP-glucose 4-epimerase
Probab=97.27 E-value=0.0052 Score=60.03 Aligned_cols=116 Identities=18% Similarity=0.157 Sum_probs=71.9
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhccc--CCCeEEEEe----CCCChhhhcC--C
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMD--TGAVVRGFL----GQPQLENALT--G 88 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~--~~~~v~~~~----~t~dl~~al~--~ 88 (369)
..+||.|+||+|++|++++..|+..+. +|+++|.... ......+.+.. ....++... ...++.++++ +
T Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~ 81 (352)
T PLN02240 4 MGRTILVTGGAGYIGSHTVLQLLLAGY--KVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTR 81 (352)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCC
Confidence 346999999999999999999998886 8999986431 11111111110 011222221 1123334444 6
Q ss_pred CcEEEEcCCCCCC-CC-CCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551 89 MDLVIIPAGVPRK-PG-MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 137 (369)
Q Consensus 89 ADiVii~ag~p~k-~g-~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 137 (369)
+|+||.+|+.+.. .. ......+..|+.....+++.+.+..... ++++|
T Consensus 82 ~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~v~~S 131 (352)
T PLN02240 82 FDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKK-LVFSS 131 (352)
T ss_pred CCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCE-EEEEc
Confidence 8999999886421 11 2345678899999999999887764444 44444
No 130
>PRK06194 hypothetical protein; Provisional
Probab=97.26 E-value=0.0079 Score=56.98 Aligned_cols=115 Identities=21% Similarity=0.185 Sum_probs=67.2
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCC---hhhhcC------
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENALT------ 87 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al~------ 87 (369)
.++|.|+||+|++|+.++..|+.+|. +|+++|.+. ......++... ..++..+. .-+| ++++++
T Consensus 6 ~k~vlVtGasggIG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~~~~~~~~~~~~~ 81 (287)
T PRK06194 6 GKVAVITGAASGFGLAFARIGAALGM--KLVLADVQQDALDRAVAELRAQ--GAEVLGVRTDVSDAAQVEALADAALERF 81 (287)
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 35899999999999999999999987 899999875 22333334321 22333222 1122 323333
Q ss_pred -CCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHH----HHHHHhhhCCC-----eEEEEecC
Q 017551 88 -GMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRT----LCEGIAKCCPN-----ATVNLISN 138 (369)
Q Consensus 88 -~ADiVii~ag~p~k~---g~~r---~~~~~~N~~i~~~----i~~~i~~~~p~-----a~viv~tN 138 (369)
..|+||..||..... ..+. ...+..|+..... +.+.+.+.+.+ +.++++|.
T Consensus 82 g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS 148 (287)
T PRK06194 82 GAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTAS 148 (287)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCC
Confidence 469999999874321 1222 2335566554444 44445554432 55666543
No 131
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=97.26 E-value=0.0032 Score=63.08 Aligned_cols=75 Identities=23% Similarity=0.256 Sum_probs=51.3
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch-hHHHHhhccc-CCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHMD-TGAVVRGFLGQPQLENALTGMDLVIIPAG 97 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~-g~~~dL~~~~-~~~~v~~~~~t~dl~~al~~ADiVii~ag 97 (369)
++||.|||| |+||+.++..|++++. .+|++.|....+ ..+.+..+.. ....+... ....+.+.+++.|+||.++.
T Consensus 1 m~~ilviGa-G~Vg~~va~~la~~~d-~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~-d~~al~~li~~~d~VIn~~p 77 (389)
T COG1748 1 MMKILVIGA-GGVGSVVAHKLAQNGD-GEVTIADRSKEKCARIAELIGGKVEALQVDAA-DVDALVALIKDFDLVINAAP 77 (389)
T ss_pred CCcEEEECC-chhHHHHHHHHHhCCC-ceEEEEeCCHHHHHHHHhhccccceeEEeccc-ChHHHHHHHhcCCEEEEeCC
Confidence 469999999 9999999999999985 699999997522 2222222111 01122221 23456788999999999974
No 132
>PRK14982 acyl-ACP reductase; Provisional
Probab=97.26 E-value=0.0019 Score=63.67 Aligned_cols=97 Identities=23% Similarity=0.265 Sum_probs=65.9
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 96 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a 96 (369)
+.++|.|+||+|+||+.++..|....-+.+|++++.+.. .....++.+ .. ..++.+++.++|+||..+
T Consensus 154 ~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~----~~------i~~l~~~l~~aDiVv~~t 223 (340)
T PRK14982 154 SKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGG----GK------ILSLEEALPEADIVVWVA 223 (340)
T ss_pred CCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhcc----cc------HHhHHHHHccCCEEEECC
Confidence 446999999999999999999976433458999998652 222222221 11 124678999999999998
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCCh
Q 017551 97 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNST 143 (369)
Q Consensus 97 g~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~ 143 (369)
+.|...-.+..++ .+..+++-++.|=|+-
T Consensus 224 s~~~~~~I~~~~l------------------~~~~~viDiAvPRDVd 252 (340)
T PRK14982 224 SMPKGVEIDPETL------------------KKPCLMIDGGYPKNLD 252 (340)
T ss_pred cCCcCCcCCHHHh------------------CCCeEEEEecCCCCCC
Confidence 8875211222111 3668888889998875
No 133
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=97.25 E-value=0.0033 Score=61.63 Aligned_cols=106 Identities=18% Similarity=0.099 Sum_probs=66.3
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEe----CCCChhhhcCC--CcEEEE
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL----GQPQLENALTG--MDLVII 94 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~----~t~dl~~al~~--ADiVii 94 (369)
+||.|+||+|++|++++..|...+. ..++++|.....+....+.+......+.... ..+++.+++++ .|+||.
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~~~g~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih 80 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIINETS-DAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMH 80 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHHHcCC-CEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEEEE
Confidence 5899999999999999999998874 2466777643211111122111011222111 12334556664 899999
Q ss_pred cCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhh
Q 017551 95 PAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKC 127 (369)
Q Consensus 95 ~ag~p~k~--g~~r~~~~~~N~~i~~~i~~~i~~~ 127 (369)
+||..... ..........|+.....+++.+.++
T Consensus 81 ~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~ 115 (355)
T PRK10217 81 LAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAY 115 (355)
T ss_pred CCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHh
Confidence 99865321 1234567788999999999998765
No 134
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=97.24 E-value=0.0021 Score=61.58 Aligned_cols=64 Identities=22% Similarity=0.266 Sum_probs=45.6
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc-hhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 96 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~-~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a 96 (369)
|||+|||. |.+|..++..|...+. +|.+||.+.. ...+.+.. .+.. .+++. +++++||+||++.
T Consensus 1 m~I~IIG~-G~mG~sla~~L~~~g~--~V~~~d~~~~~~~~a~~~g------~~~~--~~~~~-~~~~~aDlVilav 65 (279)
T PRK07417 1 MKIGIVGL-GLIGGSLGLDLRSLGH--TVYGVSRRESTCERAIERG------LVDE--ASTDL-SLLKDCDLVILAL 65 (279)
T ss_pred CeEEEEee-cHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHCC------Cccc--ccCCH-hHhcCCCEEEEcC
Confidence 58999998 9999999999998887 8999998752 11222111 1111 12344 5789999999984
No 135
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=97.23 E-value=0.0041 Score=59.89 Aligned_cols=154 Identities=18% Similarity=0.138 Sum_probs=97.5
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeC-CCChhhhc--CCCcEEEEcCC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG-QPQLENAL--TGMDLVIIPAG 97 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~-t~dl~~al--~~ADiVii~ag 97 (369)
|+|.|+|++|+|||+.+..|++.+. +++.+|... .|...-+.... ...+.+... ..-+.+.| ...|.||..||
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~--~vvV~DNL~-~g~~~~v~~~~-~~f~~gDi~D~~~L~~vf~~~~idaViHFAa 76 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGH--EVVVLDNLS-NGHKIALLKLQ-FKFYEGDLLDRALLTAVFEENKIDAVVHFAA 76 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCC--eEEEEecCC-CCCHHHhhhcc-CceEEeccccHHHHHHHHHhcCCCEEEECcc
Confidence 6899999999999999999999998 999999865 12111111110 111221110 01122222 47899999887
Q ss_pred CCCCCC--CCHHHHHHHHHHHHHHHHHHHhhhCCCeEEE-----EecCCCCChhHHHHHHHHHhCCCCCCcEEEechhcH
Q 017551 98 VPRKPG--MTRDDLFNINAGIVRTLCEGIAKCCPNATVN-----LISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDV 170 (369)
Q Consensus 98 ~p~k~g--~~r~~~~~~N~~i~~~i~~~i~~~~p~a~vi-----v~tNPv~~~t~i~ae~~~~~~~~~~~kviG~t~Ld~ 170 (369)
.-..+. +..+.+...|+--...+.+.|.++..+-+|. ++.+|..+ |+. | ..-..|.+--|-|-|-+
T Consensus 77 ~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~--PI~-E----~~~~~p~NPYG~sKlm~ 149 (329)
T COG1087 77 SISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTS--PIS-E----TSPLAPINPYGRSKLMS 149 (329)
T ss_pred ccccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCc--ccC-C----CCCCCCCCcchhHHHHH
Confidence 644322 2367888999999999999999999877554 23456542 221 2 22233566677775656
Q ss_pred HHHHHHHHHHhCCCC
Q 017551 171 VRANTFVAEVLGLDP 185 (369)
Q Consensus 171 ~R~~~~la~~lgv~~ 185 (369)
-++.+.+++..+...
T Consensus 150 E~iL~d~~~a~~~~~ 164 (329)
T COG1087 150 EEILRDAAKANPFKV 164 (329)
T ss_pred HHHHHHHHHhCCCcE
Confidence 666666777766443
No 136
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=97.21 E-value=0.0024 Score=61.51 Aligned_cols=76 Identities=24% Similarity=0.319 Sum_probs=54.1
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEc-
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP- 95 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~- 95 (369)
+..||+|+|| |++|.++++.|...+ +.+|.++|++. +...+.++.+.. +...... ..++.++++++|+||.+
T Consensus 126 ~~k~vlIlGa-GGaaraia~aL~~~G-~~~I~I~nR~~~ka~~la~~l~~~~--~~~~~~~-~~~~~~~~~~aDiVInaT 200 (284)
T PRK12549 126 SLERVVQLGA-GGAGAAVAHALLTLG-VERLTIFDVDPARAAALADELNARF--PAARATA-GSDLAAALAAADGLVHAT 200 (284)
T ss_pred cCCEEEEECC-cHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHHHHHHhhC--CCeEEEe-ccchHhhhCCCCEEEECC
Confidence 4469999999 999999999999887 45899999986 344555554432 2222221 23455678999999997
Q ss_pred -CCCC
Q 017551 96 -AGVP 99 (369)
Q Consensus 96 -ag~p 99 (369)
+|++
T Consensus 201 p~Gm~ 205 (284)
T PRK12549 201 PTGMA 205 (284)
T ss_pred cCCCC
Confidence 5654
No 137
>PRK07201 short chain dehydrogenase; Provisional
Probab=97.20 E-value=0.0063 Score=64.80 Aligned_cols=111 Identities=14% Similarity=0.089 Sum_probs=68.8
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeC-CC---------ChhhhcCCCc
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG-QP---------QLENALTGMD 90 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~-t~---------dl~~al~~AD 90 (369)
|||.|+||+|++|++++..|.......+|++++.+.......++.......+++...+ -+ ++ +.++++|
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~-~~l~~~D 79 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADI-AELGDID 79 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHH-HHhcCCC
Confidence 5899999999999999999985322338999998652222222211100022332211 01 12 2348999
Q ss_pred EEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEE
Q 017551 91 LVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATV 133 (369)
Q Consensus 91 iVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~v 133 (369)
+||.+|+... ......+....|+.....+++.+.+.....++
T Consensus 80 ~Vih~Aa~~~-~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v 121 (657)
T PRK07201 80 HVVHLAAIYD-LTADEEAQRAANVDGTRNVVELAERLQAATFH 121 (657)
T ss_pred EEEECceeec-CCCCHHHHHHHHhHHHHHHHHHHHhcCCCeEE
Confidence 9999987532 22344556678999999999988876434433
No 138
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=97.19 E-value=0.0023 Score=61.45 Aligned_cols=108 Identities=11% Similarity=0.117 Sum_probs=65.7
Q ss_pred EEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCC-hhhhc-----CCCcEEEEcC
Q 017551 23 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ-LENAL-----TGMDLVIIPA 96 (369)
Q Consensus 23 I~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~d-l~~al-----~~ADiVii~a 96 (369)
|.|+||+|++|++++..|+..+. ..+.++|..........+.+... .+.. ...+ +.+++ .++|+||.+|
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~-~~v~~~~~~~~~~~~~~~~~~~~-~d~~---~~~~~~~~~~~~~~~~~~d~Vih~A 76 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGI-TDILVVDNLKDGTKFVNLVDLDI-ADYM---DKEDFLAQIMAGDDFGDIEAIFHEG 76 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCC-ceEEEecCCCcchHHHhhhhhhh-hhhh---hHHHHHHHHhcccccCCccEEEECc
Confidence 78999999999999999998875 35677787542111111111110 0000 0011 12222 3799999998
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551 97 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 137 (369)
Q Consensus 97 g~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 137 (369)
+.+.............|+.....+.+.+.+..- .++..|
T Consensus 77 ~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~--~~i~~S 115 (308)
T PRK11150 77 ACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI--PFLYAS 115 (308)
T ss_pred eecCCcCCChHHHHHHHHHHHHHHHHHHHHcCC--cEEEEc
Confidence 864433334455678899999999999887653 345443
No 139
>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=97.16 E-value=0.00092 Score=63.72 Aligned_cols=78 Identities=19% Similarity=0.152 Sum_probs=53.0
Q ss_pred CCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551 17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 96 (369)
Q Consensus 17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a 96 (369)
...+++|+|+||+|||||+++-.|+..+. +|...|.... +....+.|....++.+..- ..--..-+..+|-|+..|
T Consensus 24 p~~~lrI~itGgaGFIgSHLvdkLm~egh--~VIa~Dn~ft-g~k~n~~~~~~~~~fel~~-hdv~~pl~~evD~IyhLA 99 (350)
T KOG1429|consen 24 PSQNLRILITGGAGFIGSHLVDKLMTEGH--EVIALDNYFT-GRKENLEHWIGHPNFELIR-HDVVEPLLKEVDQIYHLA 99 (350)
T ss_pred CCCCcEEEEecCcchHHHHHHHHHHhcCC--eEEEEecccc-cchhhcchhccCcceeEEE-eechhHHHHHhhhhhhhc
Confidence 34468999999999999999999999996 9999998752 2222244443333333211 111134688999999987
Q ss_pred CC
Q 017551 97 GV 98 (369)
Q Consensus 97 g~ 98 (369)
..
T Consensus 100 ap 101 (350)
T KOG1429|consen 100 AP 101 (350)
T ss_pred cC
Confidence 53
No 140
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=97.15 E-value=0.0011 Score=55.45 Aligned_cols=72 Identities=21% Similarity=0.279 Sum_probs=48.3
Q ss_pred EEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHH-Hhhc-ccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551 22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTA-DISH-MDTGAVVRGFLGQPQLENALTGMDLVIIPA 96 (369)
Q Consensus 22 KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~-dL~~-~~~~~~v~~~~~t~dl~~al~~ADiVii~a 96 (369)
||+|+||+|.+|+.+..+|...+.+..+.+++.....|... +... ......+.... .+ .+.+.++|+||.+.
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~Dvvf~a~ 74 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVED--AD-PEELSDVDVVFLAL 74 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEE--TS-GHHHTTESEEEE-S
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEee--cc-hhHhhcCCEEEecC
Confidence 79999999999999999999988877788888776233222 2211 11123333322 23 36789999999984
No 141
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=97.15 E-value=0.0023 Score=61.90 Aligned_cols=95 Identities=18% Similarity=0.220 Sum_probs=60.2
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCCCC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPR 100 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~p~ 100 (369)
|||+|||. |.+|++++..|...++ +|.+||.+... +..+.... ........++.++++++|+|+++. |-
T Consensus 1 M~Ig~IGl-G~mG~~la~~L~~~g~--~V~~~dr~~~~--~~~l~~~g----~~~~~s~~~~~~~~~~~dvIi~~v--p~ 69 (298)
T TIGR00872 1 MQLGLIGL-GRMGANIVRRLAKRGH--DCVGYDHDQDA--VKAMKEDR----TTGVANLRELSQRLSAPRVVWVMV--PH 69 (298)
T ss_pred CEEEEEcc-hHHHHHHHHHHHHCCC--EEEEEECCHHH--HHHHHHcC----CcccCCHHHHHhhcCCCCEEEEEc--Cc
Confidence 58999999 9999999999999887 99999998632 12222211 111111223445667899999983 21
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCC
Q 017551 101 KPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPV 140 (369)
Q Consensus 101 k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv 140 (369)
..+.++++.+.... ++.+++..||..
T Consensus 70 --------------~~~~~v~~~l~~~l~~g~ivid~st~~ 96 (298)
T TIGR00872 70 --------------GIVDAVLEELAPTLEKGDIVIDGGNSY 96 (298)
T ss_pred --------------hHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence 12344445555444 566777776653
No 142
>PRK07680 late competence protein ComER; Validated
Probab=97.15 E-value=0.0025 Score=60.73 Aligned_cols=97 Identities=15% Similarity=0.204 Sum_probs=63.0
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCC--CcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPL--VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV 98 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~--~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~ 98 (369)
|||+|||+ |.+|+.++..|...+. ..++.++|.+.... ..+.+.. ..+.. +.+..++++++|+||++.
T Consensus 1 m~I~iIG~-G~mG~ala~~L~~~g~~~~~~v~v~~r~~~~~--~~~~~~~--~g~~~---~~~~~~~~~~aDiVilav-- 70 (273)
T PRK07680 1 MNIGFIGT-GNMGTILIEAFLESGAVKPSQLTITNRTPAKA--YHIKERY--PGIHV---AKTIEEVISQSDLIFICV-- 70 (273)
T ss_pred CEEEEECc-cHHHHHHHHHHHHCCCCCcceEEEECCCHHHH--HHHHHHc--CCeEE---ECCHHHHHHhCCEEEEec--
Confidence 58999999 9999999999888773 25799999875221 2222211 12332 234567789999999985
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCC
Q 017551 99 PRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVN 141 (369)
Q Consensus 99 p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~ 141 (369)
| -..+.++.+.+..+. ++.+|+.++|++.
T Consensus 71 ~--------------p~~~~~vl~~l~~~l~~~~~iis~~ag~~ 100 (273)
T PRK07680 71 K--------------PLDIYPLLQKLAPHLTDEHCLVSITSPIS 100 (273)
T ss_pred C--------------HHHHHHHHHHHHhhcCCCCEEEEECCCCC
Confidence 1 111334445555443 5678888888774
No 143
>PRK05865 hypothetical protein; Provisional
Probab=97.13 E-value=0.0053 Score=67.45 Aligned_cols=104 Identities=17% Similarity=0.139 Sum_probs=70.7
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEE-eCCCChhhhcCCCcEEEEcCCCC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGF-LGQPQLENALTGMDLVIIPAGVP 99 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~-~~t~dl~~al~~ADiVii~ag~p 99 (369)
|||.|+||+|++|++++..|..++. +|+++|.+.... +.. . ...+... ....++.++++++|+||.+|+..
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G~--~Vv~l~R~~~~~----~~~-~-v~~v~gDL~D~~~l~~al~~vD~VVHlAa~~ 72 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQGH--EVVGIARHRPDS----WPS-S-ADFIAADIRDATAVESAMTGADVVAHCAWVR 72 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcC--EEEEEECCchhh----ccc-C-ceEEEeeCCCHHHHHHHHhCCCEEEECCCcc
Confidence 6899999999999999999999887 999999764211 100 0 0112211 11234567789999999998753
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCC
Q 017551 100 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV 140 (369)
Q Consensus 100 ~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv 140 (369)
. + ....|+.....+++.+.+.... .++++|.+.
T Consensus 73 ~-~------~~~vNv~GT~nLLeAa~~~gvk-r~V~iSS~~ 105 (854)
T PRK05865 73 G-R------NDHINIDGTANVLKAMAETGTG-RIVFTSSGH 105 (854)
T ss_pred c-c------hHHHHHHHHHHHHHHHHHcCCC-eEEEECCcH
Confidence 2 1 3467888888888888776533 466666654
No 144
>PF11975 Glyco_hydro_4C: Family 4 glycosyl hydrolase C-terminal domain; InterPro: IPR022616 This domain is found primarily in bacterial family 4 glycosyl hydrolases. It is found in the C terminus. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds; PDB: 1UP4_A 1UP6_C 1UP7_E 1VJT_A 1U8X_X 1S6Y_A 3FEF_D 1OBB_A.
Probab=97.11 E-value=0.0018 Score=60.46 Aligned_cols=77 Identities=12% Similarity=0.059 Sum_probs=49.9
Q ss_pred CCchhhHHHHHHHHHHHHHHhccCCCCceeEE-EeecCCC---CCccEEEEEEEEcCCCeEEEccCCCCCHHHHHHHHHH
Q 017551 240 AGSATLSMAYAAVKFADACLRGLRGDAGVVEC-AFVASQV---TELPFFASKVRLGRQGAEEIFQLGPLNEYESGLFCLL 315 (369)
Q Consensus 240 ~g~~~~s~A~a~~~li~ai~~~~~~~~~v~~~-~~~~g~~---~~~~~~svPv~lg~~Gv~~~~~~~~L~~~E~~~L~~~ 315 (369)
+|+..++ ..++++|.+|.+ .++.+ +.++|.+ |+|.+++|||+|+++|+.++.. ++|++...++++..
T Consensus 133 ~~~~~~a-----~~~i~~i~~~~~---~~~~vNv~N~G~I~nLp~davVEvp~~v~~~Gi~P~~~-g~lP~~~~~li~~~ 203 (232)
T PF11975_consen 133 RGSGEYA-----EAAIEAIYNDKP---KRFVVNVPNNGAIPNLPDDAVVEVPCYVDGDGIHPVAV-GPLPPAIAGLIQQV 203 (232)
T ss_dssp STTSCHH-----HHHHHHHHHSSE---EEEEEEEE-TTSSTTS-TTSEEEEEEEEETTEEEEB-S-B---HHHHHHHHHH
T ss_pred ccccchH-----HHHHHHHhcCCC---eEEEEECCCCCccCCCCCCcEEEEEEEEcCCeeEeccC-CCCCHHHHHHHHHH
Confidence 3455555 345555677654 24445 4789987 8999999999999999999665 79999999988866
Q ss_pred HHHHHHHHHh
Q 017551 316 HLCFQDWLGE 325 (369)
Q Consensus 316 ~~~i~~~l~~ 325 (369)
...-+-.++.
T Consensus 204 ~~~e~L~veA 213 (232)
T PF11975_consen 204 KAYERLTVEA 213 (232)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 6544433433
No 145
>PRK08655 prephenate dehydrogenase; Provisional
Probab=97.09 E-value=0.004 Score=63.67 Aligned_cols=66 Identities=23% Similarity=0.324 Sum_probs=47.4
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 96 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a 96 (369)
|||+||||+|.+|..++..|...+. +|.++|.+.... .++.... .+.. ++++.+++.+||+||++.
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~~G~--~V~v~~r~~~~~--~~~a~~~---gv~~---~~~~~e~~~~aDvVIlav 66 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKEKGF--EVIVTGRDPKKG--KEVAKEL---GVEY---ANDNIDAAKDADIVIISV 66 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHHCCC--EEEEEECChHHH--HHHHHHc---CCee---ccCHHHHhccCCEEEEec
Confidence 6899999669999999999999887 899999875221 1111111 1121 346678899999999984
No 146
>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]
Probab=97.08 E-value=0.0046 Score=61.38 Aligned_cols=111 Identities=21% Similarity=0.237 Sum_probs=74.4
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc-hhHHHHhhcccCCCeEEEEe----CCCChhhhcCCCcEEE
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFL----GQPQLENALTGMDLVI 93 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~-~g~~~dL~~~~~~~~v~~~~----~t~dl~~al~~ADiVi 93 (369)
+..++.|+||+|++|++++..|..++...+|.++|.... ...-.+.... ....++... ...++..|++++ .|+
T Consensus 3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~-~~~~v~~~~~D~~~~~~i~~a~~~~-~Vv 80 (361)
T KOG1430|consen 3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGF-RSGRVTVILGDLLDANSISNAFQGA-VVV 80 (361)
T ss_pred cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcc-cCCceeEEecchhhhhhhhhhccCc-eEE
Confidence 456999999999999999999999886679999999762 1111222211 122333221 134567899999 666
Q ss_pred EcCCC--CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCe
Q 017551 94 IPAGV--PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNA 131 (369)
Q Consensus 94 i~ag~--p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a 131 (369)
+.+.. |...-..|......|+.-.+.+.+++.+.+=+-
T Consensus 81 h~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~ 120 (361)
T KOG1430|consen 81 HCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKR 120 (361)
T ss_pred EeccccCccccccchhhheeecchhHHHHHHHHHHhCCCE
Confidence 65433 332223477777889999999999998876433
No 147
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=97.08 E-value=0.0007 Score=61.80 Aligned_cols=109 Identities=20% Similarity=0.200 Sum_probs=70.7
Q ss_pred EEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC-chhHHHHhhcccCCCeEEEE-eCCCChhhhcCCC--cEEEEcCCC
Q 017551 23 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGF-LGQPQLENALTGM--DLVIIPAGV 98 (369)
Q Consensus 23 I~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~-~~g~~~dL~~~~~~~~v~~~-~~t~dl~~al~~A--DiVii~ag~ 98 (369)
|.|+||+|++|+.++..|..++. +++.+.... ......+..... .+... ....++.+.+++. |.||.+|+.
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~---~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~ 75 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGH--EVIVLSRSSNSESFEEKKLNVE---FVIGDLTDKEQLEKLLEKANIDVVIHLAAF 75 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTT--EEEEEESCSTGGHHHHHHTTEE---EEESETTSHHHHHHHHHHHTESEEEEEBSS
T ss_pred EEEEccCCHHHHHHHHHHHHcCC--ccccccccccccccccccceEE---EEEeeccccccccccccccCceEEEEeecc
Confidence 78999999999999999999987 655444444 222211111100 01110 1123455677777 999999987
Q ss_pred CCC--CCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551 99 PRK--PGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 137 (369)
Q Consensus 99 p~k--~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 137 (369)
+.- ......+.+..|+...+.+.+.+.+... ..+++++
T Consensus 76 ~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~~i~~s 115 (236)
T PF01370_consen 76 SSNPESFEDPEEIIEANVQGTRNLLEAAREAGV-KRFIFLS 115 (236)
T ss_dssp SSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTT-SEEEEEE
T ss_pred ccccccccccccccccccccccccccccccccc-ccccccc
Confidence 531 1134567788999999999999999877 3445444
No 148
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=97.06 E-value=0.0039 Score=60.46 Aligned_cols=67 Identities=25% Similarity=0.260 Sum_probs=47.6
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc-hhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 96 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~-~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a 96 (369)
+||+|||+ |.+|..++..|...+...+|.++|.+.. ...+.++ . ..... ..++.+++++||+||++.
T Consensus 7 ~~I~IIG~-G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~---g--~~~~~---~~~~~~~~~~aDvViiav 74 (307)
T PRK07502 7 DRVALIGI-GLIGSSLARAIRRLGLAGEIVGADRSAETRARAREL---G--LGDRV---TTSAAEAVKGADLVILCV 74 (307)
T ss_pred cEEEEEee-CHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhC---C--CCcee---cCCHHHHhcCCCEEEECC
Confidence 59999998 9999999999998886568999999762 1111111 1 11111 234567889999999985
No 149
>COG0677 WecC UDP-N-acetyl-D-mannosaminuronate dehydrogenase [Cell envelope biogenesis, outer membrane]
Probab=97.04 E-value=0.011 Score=59.02 Aligned_cols=132 Identities=16% Similarity=0.225 Sum_probs=81.9
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch------hHH----HHhh----cccCCCeEEEEeCCCChhhh
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP------GVT----ADIS----HMDTGAVVRGFLGQPQLENA 85 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~------g~~----~dL~----~~~~~~~v~~~~~t~dl~~a 85 (369)
.++|+|||- |+||.++|..++.+|. .+.-+|+|+.. |.. -++. ......+++. |+|. +.
T Consensus 9 ~~~I~ViGL-GYVGLPlA~~fA~~G~--~ViG~DIn~~~Vd~ln~G~~~i~e~~~~~~v~~~v~~g~lra---Ttd~-~~ 81 (436)
T COG0677 9 SATIGVIGL-GYVGLPLAAAFASAGF--KVIGVDINQKKVDKLNRGESYIEEPDLDEVVKEAVESGKLRA---TTDP-EE 81 (436)
T ss_pred ceEEEEEcc-ccccHHHHHHHHHcCC--ceEeEeCCHHHHHHHhCCcceeecCcHHHHHHHHHhcCCceE---ecCh-hh
Confidence 379999999 9999999999999998 99999999711 110 0111 1112345664 4565 56
Q ss_pred cCCCcEEEEcCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEe--cCCCCChhHHHHHHHHHhCCCCCCcE
Q 017551 86 LTGMDLVIIPAGVPRKPG-MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI--SNPVNSTVPIAAEVFKKAGTYDPKKL 162 (369)
Q Consensus 86 l~~ADiVii~ag~p~k~g-~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~--tNPv~~~t~i~ae~~~~~~~~~~~kv 162 (369)
++.||++||+.-.|.+.. +.- +..+..-++.|.++-.++-++++ |-|.+.+-.++--.+...+|+--..=
T Consensus 82 l~~~dv~iI~VPTPl~~~~~pD-------ls~v~~aa~sIa~~L~kG~LVIlEST~~PGTTe~v~~plle~~sgL~~~~D 154 (436)
T COG0677 82 LKECDVFIICVPTPLKKYREPD-------LSYVESAARSIAPVLKKGDLVILESTTPPGTTEEVVKPLLEERSGLKFGED 154 (436)
T ss_pred cccCCEEEEEecCCcCCCCCCC-------hHHHHHHHHHHHHhcCCCCEEEEecCCCCCcHHHHHHHHHhhcCCCcccce
Confidence 789999999976665442 222 33445556666666544423333 78887766554333444465544333
Q ss_pred EEe
Q 017551 163 LGV 165 (369)
Q Consensus 163 iG~ 165 (369)
|++
T Consensus 155 f~l 157 (436)
T COG0677 155 FYL 157 (436)
T ss_pred eeE
Confidence 333
No 150
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=97.03 E-value=0.0047 Score=59.12 Aligned_cols=109 Identities=11% Similarity=0.123 Sum_probs=66.7
Q ss_pred EEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhh----cCCCcEEEEcCCC
Q 017551 23 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENA----LTGMDLVIIPAGV 98 (369)
Q Consensus 23 I~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~a----l~~ADiVii~ag~ 98 (369)
|.|+||+|++|++++..|..++. .+|+++|..........+........+.. ...++.. +.++|+||..|+.
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~-~~v~~~~~~~~~~~~~~~~~~~~~~d~~~---~~~~~~~~~~~~~~~D~vvh~A~~ 76 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGI-TDILVVDNLRDGHKFLNLADLVIADYIDK---EDFLDRLEKGAFGKIEAIFHQGAC 76 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCC-ceEEEEecCCCchhhhhhhheeeeccCcc---hhHHHHHHhhccCCCCEEEECccc
Confidence 57999999999999999998884 26888886542111111111000011110 1112222 2589999999986
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551 99 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 137 (369)
Q Consensus 99 p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 137 (369)
+.............|+.....+.+.+.+... .++++|
T Consensus 77 ~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~--~~v~~S 113 (314)
T TIGR02197 77 SDTTETDGEYMMENNYQYSKRLLDWCAEKGI--PFIYAS 113 (314)
T ss_pred cCccccchHHHHHHHHHHHHHHHHHHHHhCC--cEEEEc
Confidence 5322234455678899999999998887653 355554
No 151
>PLN02688 pyrroline-5-carboxylate reductase
Probab=97.02 E-value=0.0037 Score=59.10 Aligned_cols=66 Identities=17% Similarity=0.270 Sum_probs=46.3
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCC--CcEEEEE-eCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPL--VSVLHLY-DVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 96 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~--~~el~L~-D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a 96 (369)
|||++||. |.+|+.++..|...++ ..+|+++ |.+..+ ...+... .+.. .++..+++++||+||++.
T Consensus 1 ~kI~~IG~-G~mG~a~a~~L~~~g~~~~~~i~v~~~r~~~~--~~~~~~~----g~~~---~~~~~e~~~~aDvVil~v 69 (266)
T PLN02688 1 FRVGFIGA-GKMAEAIARGLVASGVVPPSRISTADDSNPAR--RDVFQSL----GVKT---AASNTEVVKSSDVIILAV 69 (266)
T ss_pred CeEEEECC-cHHHHHHHHHHHHCCCCCcceEEEEeCCCHHH--HHHHHHc----CCEE---eCChHHHHhcCCEEEEEE
Confidence 68999999 9999999999988774 4578888 765422 2222221 1222 234567789999999985
No 152
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=97.01 E-value=0.0049 Score=57.26 Aligned_cols=114 Identities=18% Similarity=0.283 Sum_probs=68.2
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCC---hhhhc-------
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL------- 86 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al------- 86 (369)
.+++.|+||+|++|+.++..|++.+. +|++++.++ ......++.+. ..++..+. .-+| +.+++
T Consensus 7 ~~~vlItGasg~iG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 82 (262)
T PRK13394 7 GKTAVVTGAASGIGKEIALELARAGA--AVAIADLNQDGANAVADEINKA--GGKAIGVAMDVTNEDAVNAGIDKVAERF 82 (262)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHhc--CceEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 45899999999999999999999988 899999886 22233334332 22333221 1122 22222
Q ss_pred CCCcEEEEcCCCCCC-C--C---CCHHHHHHHHHHH----HHHHHHHHhhhCCCeEEEEec
Q 017551 87 TGMDLVIIPAGVPRK-P--G---MTRDDLFNINAGI----VRTLCEGIAKCCPNATVNLIS 137 (369)
Q Consensus 87 ~~ADiVii~ag~p~k-~--g---~~r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~t 137 (369)
.+.|+||..+|.... + . ......+..|..- .+.+.+.+.+.++.+.++++|
T Consensus 83 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~s 143 (262)
T PRK13394 83 GSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMG 143 (262)
T ss_pred CCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEc
Confidence 348999999886421 1 1 1123445566655 556666663334445566655
No 153
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.01 E-value=0.0032 Score=53.77 Aligned_cols=105 Identities=18% Similarity=0.194 Sum_probs=63.9
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV 98 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~ 98 (369)
+..+|.|+|| |.+|..++..|...+. .+|.+++++..+ +.+|........+.... .+++.+.+.++|+||.+.+.
T Consensus 11 ~~~~vlviGa-Gg~ar~v~~~L~~~g~-~~i~i~nRt~~r--a~~l~~~~~~~~~~~~~-~~~~~~~~~~~DivI~aT~~ 85 (135)
T PF01488_consen 11 KGKRVLVIGA-GGAARAVAAALAALGA-KEITIVNRTPER--AEALAEEFGGVNIEAIP-LEDLEEALQEADIVINATPS 85 (135)
T ss_dssp TTSEEEEESS-SHHHHHHHHHHHHTTS-SEEEEEESSHHH--HHHHHHHHTGCSEEEEE-GGGHCHHHHTESEEEE-SST
T ss_pred CCCEEEEECC-HHHHHHHHHHHHHcCC-CEEEEEECCHHH--HHHHHHHcCccccceee-HHHHHHHHhhCCeEEEecCC
Confidence 4569999999 9999999999998874 479999987522 22232211223444433 35677789999999998654
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCC-CeEEEEecCCCCChh
Q 017551 99 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNSTV 144 (369)
Q Consensus 99 p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNPv~~~t 144 (369)
+..+ +-.+ .+....+ ..+++-.++|-|+=.
T Consensus 86 ~~~~-------------i~~~---~~~~~~~~~~~v~Dla~Pr~i~~ 116 (135)
T PF01488_consen 86 GMPI-------------ITEE---MLKKASKKLRLVIDLAVPRDIDP 116 (135)
T ss_dssp TSTS-------------STHH---HHTTTCHHCSEEEES-SS-SB-T
T ss_pred CCcc-------------cCHH---HHHHHHhhhhceeccccCCCCCh
Confidence 4321 0111 1111111 247888899988754
No 154
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=97.01 E-value=0.0048 Score=58.98 Aligned_cols=110 Identities=16% Similarity=0.083 Sum_probs=68.5
Q ss_pred EEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch-h-HHHHhhcccCCCeEEEEe-C---CCChhhhcC--CCcEEE
Q 017551 22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-G-VTADISHMDTGAVVRGFL-G---QPQLENALT--GMDLVI 93 (369)
Q Consensus 22 KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~-g-~~~dL~~~~~~~~v~~~~-~---t~dl~~al~--~ADiVi 93 (369)
||.|+||+|++|+.++..|..++. +++++|..... . ....+.+. ..+..+. . ..++.++++ +.|+||
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~--~V~~~~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~d~vv 75 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGH--EVVVLDNLSNGSPEALKRGERI---TRVTFVEGDLRDRELLDRLFEEHKIDAVI 75 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCC--eEEEEeCCCccchhhhhhhccc---cceEEEECCCCCHHHHHHHHHhCCCcEEE
Confidence 689999999999999999998887 88888864311 1 11111111 1222221 1 122334443 699999
Q ss_pred EcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551 94 IPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 137 (369)
Q Consensus 94 i~ag~p~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 137 (369)
..+|....+ .....+.+..|+.....+++.+.++.... ++++|
T Consensus 76 ~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~v~~s 120 (328)
T TIGR01179 76 HFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKK-FIFSS 120 (328)
T ss_pred ECccccCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCE-EEEec
Confidence 999864322 12334556788988899998888765444 33443
No 155
>PRK08267 short chain dehydrogenase; Provisional
Probab=97.01 E-value=0.0067 Score=56.62 Aligned_cols=112 Identities=23% Similarity=0.286 Sum_probs=65.3
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch--hHHHHhhcccCCCeEEEE----eCCCChhhhc--------
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGF----LGQPQLENAL-------- 86 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~--g~~~dL~~~~~~~~v~~~----~~t~dl~~al-------- 86 (369)
+++.|+||+|++|+.++..|+..+. +|+++|.+... ....++.. ..+..+ +...++.+++
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~~~~~~ 75 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGW--RVGAYDINEAGLAALAAELGA----GNAWTGALDVTDRAAWDAALADFAAATG 75 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHhcC----CceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 4699999999999999999999887 89999987521 11122211 112111 1112222333
Q ss_pred CCCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHhh---hCCCeEEEEecC
Q 017551 87 TGMDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEGIAK---CCPNATVNLISN 138 (369)
Q Consensus 87 ~~ADiVii~ag~p~k~g---~~---r~~~~~~N~~i~~~i~~~i~~---~~p~a~viv~tN 138 (369)
...|+||..+|...... .+ ....+..|+.....+.+.+.. ..+.+.+++++-
T Consensus 76 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS 136 (260)
T PRK08267 76 GRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSS 136 (260)
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCc
Confidence 34599999998754221 12 234566776655555555432 234555666654
No 156
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=97.01 E-value=0.0029 Score=60.84 Aligned_cols=63 Identities=16% Similarity=0.256 Sum_probs=46.4
Q ss_pred EEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551 22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 96 (369)
Q Consensus 22 KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a 96 (369)
||+|||. |.+|+.++..|+..+. +|.+||.+... ...+.+.. . .. .++..+++++||+||++.
T Consensus 1 ~IgvIG~-G~mG~~iA~~l~~~G~--~V~~~dr~~~~--~~~~~~~g--~--~~---~~~~~~~~~~aDivi~~v 63 (291)
T TIGR01505 1 KVGFIGL-GIMGSPMSINLAKAGY--QLHVTTIGPEV--ADELLAAG--A--VT---AETARQVTEQADVIFTMV 63 (291)
T ss_pred CEEEEEe-cHHHHHHHHHHHHCCC--eEEEEcCCHHH--HHHHHHCC--C--cc---cCCHHHHHhcCCEEEEec
Confidence 6999999 9999999999999887 99999987522 12222211 1 11 235678899999999984
No 157
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=97.00 E-value=0.0028 Score=53.78 Aligned_cols=103 Identities=23% Similarity=0.270 Sum_probs=57.6
Q ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551 18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 97 (369)
Q Consensus 18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag 97 (369)
...+||.|||+ |.+|.+|+..|...++ +|.-+-... ..-...+.+.. +.... .++.+.+++||+++++.
T Consensus 8 ~~~l~I~iIGa-GrVG~~La~aL~~ag~--~v~~v~srs-~~sa~~a~~~~--~~~~~----~~~~~~~~~aDlv~iav- 76 (127)
T PF10727_consen 8 AARLKIGIIGA-GRVGTALARALARAGH--EVVGVYSRS-PASAERAAAFI--GAGAI----LDLEEILRDADLVFIAV- 76 (127)
T ss_dssp ----EEEEECT-SCCCCHHHHHHHHTTS--EEEEESSCH-H-HHHHHHC----TT---------TTGGGCC-SEEEE-S-
T ss_pred CCccEEEEECC-CHHHHHHHHHHHHCCC--eEEEEEeCC-ccccccccccc--ccccc----cccccccccCCEEEEEe-
Confidence 34589999999 9999999999999997 665554432 22222233322 11221 23467889999999994
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHhhh--C-CCeEEEEe--cCCCCChhHH
Q 017551 98 VPRKPGMTRDDLFNINAGIVRTLCEGIAKC--C-PNATVNLI--SNPVNSTVPI 146 (369)
Q Consensus 98 ~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~--~-p~a~viv~--tNPv~~~t~i 146 (369)
|+ ..+.++++++..+ . |+.+|+=. +-+++++.++
T Consensus 77 ----pD-----------daI~~va~~La~~~~~~~g~iVvHtSGa~~~~vL~p~ 115 (127)
T PF10727_consen 77 ----PD-----------DAIAEVAEQLAQYGAWRPGQIVVHTSGALGSDVLAPA 115 (127)
T ss_dssp -----C-----------CHHHHHHHHHHCC--S-TT-EEEES-SS--GGGGHHH
T ss_pred ----ch-----------HHHHHHHHHHHHhccCCCCcEEEECCCCChHHhhhhH
Confidence 12 1356778888776 3 44444333 3566777664
No 158
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=96.98 E-value=0.013 Score=55.81 Aligned_cols=118 Identities=18% Similarity=0.177 Sum_probs=75.5
Q ss_pred CCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe----CCCChhh------
Q 017551 17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL----GQPQLEN------ 84 (369)
Q Consensus 17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~----~t~dl~~------ 84 (369)
..+.+.+.|+|||++||..+|..|+.++. +|+|+.+++ +...+.+|.+.. ...+.... .+++.+.
T Consensus 3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~--~liLvaR~~~kL~~la~~l~~~~-~v~v~vi~~DLs~~~~~~~l~~~l~ 79 (265)
T COG0300 3 PMKGKTALITGASSGIGAELAKQLARRGY--NLILVARREDKLEALAKELEDKT-GVEVEVIPADLSDPEALERLEDELK 79 (265)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCcHHHHHHHHHHHHHhh-CceEEEEECcCCChhHHHHHHHHHH
Confidence 34567999999999999999999999999 999999987 566677777543 12332221 1122211
Q ss_pred -hcCCCcEEEEcCCCCCCCC------CCHHHHHHHHHHHHHHHHHHHhhh---CCCeEEEEec
Q 017551 85 -ALTGMDLVIIPAGVPRKPG------MTRDDLFNINAGIVRTLCEGIAKC---CPNATVNLIS 137 (369)
Q Consensus 85 -al~~ADiVii~ag~p~k~g------~~r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~t 137 (369)
..-..|+.|..||...-.. .+-.+++.-|+--...+...+-.. .-.+.||+++
T Consensus 80 ~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~ 142 (265)
T COG0300 80 ERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIG 142 (265)
T ss_pred hcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEe
Confidence 1126899999999754221 123556677765555554444432 2245566664
No 159
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.97 E-value=0.018 Score=53.04 Aligned_cols=76 Identities=22% Similarity=0.302 Sum_probs=49.8
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEeC-CC---Chhhhc------
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLG-QP---QLENAL------ 86 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~~-t~---dl~~al------ 86 (369)
+.++|.|+||+|++|+.++..|++.+. +|++++.+.. .....++.+ ..++..+.+ -. ++..++
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~ 78 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGA--RVVVTDRNEEAAERVAAEILA---GGRAIAVAADVSDEADVEAAVAAALER 78 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHhc---CCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 346999999999999999999999887 8999999862 222233332 122332221 11 222222
Q ss_pred -CCCcEEEEcCCCC
Q 017551 87 -TGMDLVIIPAGVP 99 (369)
Q Consensus 87 -~~ADiVii~ag~p 99 (369)
...|+||..+|..
T Consensus 79 ~~~~d~vi~~ag~~ 92 (251)
T PRK07231 79 FGSVDILVNNAGTT 92 (251)
T ss_pred hCCCCEEEECCCCC
Confidence 3579999999864
No 160
>PRK07634 pyrroline-5-carboxylate reductase; Reviewed
Probab=96.97 E-value=0.01 Score=55.27 Aligned_cols=70 Identities=10% Similarity=0.190 Sum_probs=46.5
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCC--CCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINP--LVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 96 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~--~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a 96 (369)
+.+||+|||+ |.+|+.++..+...+ ...+++.++.+.. ....++.+.. .+.. ++|+++.++++|+||++.
T Consensus 3 ~~~kI~iIG~-G~mg~ala~~l~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~---~~~~---~~~~~~~~~~~DiViiav 74 (245)
T PRK07634 3 KKHRILFIGA-GRMAEAIFSGLLKTSKEYIEEIIVSNRSNV-EKLDQLQARY---NVST---TTDWKQHVTSVDTIVLAM 74 (245)
T ss_pred CCCeEEEECc-CHHHHHHHHHHHhCCCCCcCeEEEECCCCH-HHHHHHHHHc---CcEE---eCChHHHHhcCCEEEEec
Confidence 4579999999 999999999888765 2445778876431 1122233211 1222 245677889999999983
No 161
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=96.97 E-value=0.004 Score=59.92 Aligned_cols=64 Identities=17% Similarity=0.243 Sum_probs=47.0
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 96 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a 96 (369)
+||+|||. |.+|+.++..++..+. +|.+||.+..... .+... .+.. .+++.+++++||+||++.
T Consensus 3 ~~IgviG~-G~mG~~~a~~l~~~g~--~v~~~d~~~~~~~--~~~~~----g~~~---~~~~~e~~~~~d~vi~~v 66 (296)
T PRK11559 3 MKVGFIGL-GIMGKPMSKNLLKAGY--SLVVYDRNPEAVA--EVIAA----GAET---ASTAKAVAEQCDVIITML 66 (296)
T ss_pred ceEEEEcc-CHHHHHHHHHHHHCCC--eEEEEcCCHHHHH--HHHHC----CCee---cCCHHHHHhcCCEEEEeC
Confidence 58999999 9999999999998887 8999998762211 12211 1121 345678889999999984
No 162
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=96.96 E-value=0.0039 Score=62.41 Aligned_cols=53 Identities=19% Similarity=0.354 Sum_probs=43.7
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 96 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a 96 (369)
.+||+||||.|.+|..++..|...++ +|.++|.+.. ++.++++++||+||++.
T Consensus 98 ~~~I~IiGG~GlmG~slA~~l~~~G~--~V~~~d~~~~----------------------~~~~~~~~~aDlVilav 150 (374)
T PRK11199 98 LRPVVIVGGKGQLGRLFAKMLTLSGY--QVRILEQDDW----------------------DRAEDILADAGMVIVSV 150 (374)
T ss_pred cceEEEEcCCChhhHHHHHHHHHCCC--eEEEeCCCcc----------------------hhHHHHHhcCCEEEEeC
Confidence 37999999559999999999999987 8999997520 13457789999999984
No 163
>PRK06545 prephenate dehydrogenase; Validated
Probab=96.94 E-value=0.0064 Score=60.46 Aligned_cols=67 Identities=21% Similarity=0.287 Sum_probs=46.7
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhH-HHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV-TADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 96 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~-~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a 96 (369)
.||+|||. |.||.+++..|+..++ ++.++|.+..... ...... . .+.. .++++.+++++||+||++.
T Consensus 1 ~~I~iIG~-GliG~siA~~L~~~G~--~v~i~~~~~~~~~~~~a~~~-~---~~~~--~~~~~~~~~~~aDlVilav 68 (359)
T PRK06545 1 RTVLIVGL-GLIGGSLALAIKAAGP--DVFIIGYDPSAAQLARALGF-G---VIDE--LAADLQRAAAEADLIVLAV 68 (359)
T ss_pred CeEEEEEe-CHHHHHHHHHHHhcCC--CeEEEEeCCCHHHHHHHhcC-C---CCcc--cccCHHHHhcCCCEEEEeC
Confidence 37999999 9999999999999887 7788888762211 111111 0 1111 1356778899999999984
No 164
>PRK12320 hypothetical protein; Provisional
Probab=96.93 E-value=0.0058 Score=65.72 Aligned_cols=101 Identities=14% Similarity=0.095 Sum_probs=65.7
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCCCC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPR 100 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~p~ 100 (369)
|||.|+||+|++|++++..|...++ +|..+|..... +.+.. ...+........+.++++++|+||..++...
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~G~--~Vi~ldr~~~~-----~~~~~-ve~v~~Dl~d~~l~~al~~~D~VIHLAa~~~ 72 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAAGH--TVSGIAQHPHD-----ALDPR-VDYVCASLRNPVLQELAGEADAVIHLAPVDT 72 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC--EEEEEeCChhh-----cccCC-ceEEEccCCCHHHHHHhcCCCEEEEcCccCc
Confidence 6899999999999999999998887 99999975421 11100 0111111101124566789999999986531
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551 101 KPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 137 (369)
Q Consensus 101 k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 137 (369)
.. ....|+....++++.+++... .++++|
T Consensus 73 --~~----~~~vNv~Gt~nLleAA~~~Gv--RiV~~S 101 (699)
T PRK12320 73 --SA----PGGVGITGLAHVANAAARAGA--RLLFVS 101 (699)
T ss_pred --cc----hhhHHHHHHHHHHHHHHHcCC--eEEEEE
Confidence 11 124688888888888877653 455554
No 165
>PRK11880 pyrroline-5-carboxylate reductase; Reviewed
Probab=96.93 E-value=0.0052 Score=58.17 Aligned_cols=95 Identities=14% Similarity=0.158 Sum_probs=60.1
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCC-CcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPL-VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV 98 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~-~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~ 98 (369)
.+||+|||+ |.+|+.++..+...+. ..++.++|.+... ...+.+.. .+.. +++..+.++++|+||++.
T Consensus 2 mm~I~iIG~-G~mG~~la~~l~~~g~~~~~v~v~~r~~~~--~~~~~~~~---g~~~---~~~~~~~~~~advVil~v-- 70 (267)
T PRK11880 2 MKKIGFIGG-GNMASAIIGGLLASGVPAKDIIVSDPSPEK--RAALAEEY---GVRA---ATDNQEAAQEADVVVLAV-- 70 (267)
T ss_pred CCEEEEEec-hHHHHHHHHHHHhCCCCcceEEEEcCCHHH--HHHHHHhc---CCee---cCChHHHHhcCCEEEEEc--
Confidence 368999999 9999999999888762 2478999987522 11222210 1122 234566789999999984
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCC
Q 017551 99 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV 140 (369)
Q Consensus 99 p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv 140 (369)
| ...+.++.+.+..+. +..|+..+|-+
T Consensus 71 ~--------------~~~~~~v~~~l~~~~-~~~vvs~~~gi 97 (267)
T PRK11880 71 K--------------PQVMEEVLSELKGQL-DKLVVSIAAGV 97 (267)
T ss_pred C--------------HHHHHHHHHHHHhhc-CCEEEEecCCC
Confidence 1 122445555555443 45666677755
No 166
>PLN02686 cinnamoyl-CoA reductase
Probab=96.91 E-value=0.0043 Score=61.72 Aligned_cols=108 Identities=10% Similarity=0.123 Sum_probs=67.6
Q ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch-hHHHHhhcc---c-CCCeEEEEe----CCCChhhhcCC
Q 017551 18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHM---D-TGAVVRGFL----GQPQLENALTG 88 (369)
Q Consensus 18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~-g~~~dL~~~---~-~~~~v~~~~----~t~dl~~al~~ 88 (369)
.+.++|.|+||+|++|++++..|+..+. +|+++..+... ....++... . ....+..+. ...++.+++++
T Consensus 51 ~~~k~VLVTGatGfIG~~lv~~L~~~G~--~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~~ 128 (367)
T PLN02686 51 AEARLVCVTGGVSFLGLAIVDRLLRHGY--SVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFDG 128 (367)
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHHh
Confidence 4567999999999999999999999987 88776554311 111122110 0 001223221 12235677899
Q ss_pred CcEEEEcCCCCCCCCC--CHHHHHHHHHHHHHHHHHHHhhh
Q 017551 89 MDLVIIPAGVPRKPGM--TRDDLFNINAGIVRTLCEGIAKC 127 (369)
Q Consensus 89 ADiVii~ag~p~k~g~--~r~~~~~~N~~i~~~i~~~i~~~ 127 (369)
+|.|+.+++.....+. ....+...|+.....+.+.+.+.
T Consensus 129 ~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~ 169 (367)
T PLN02686 129 CAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRT 169 (367)
T ss_pred ccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhc
Confidence 9999998875322221 12344567888888999988765
No 167
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=96.90 E-value=0.0091 Score=57.52 Aligned_cols=65 Identities=20% Similarity=0.258 Sum_probs=48.8
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 96 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a 96 (369)
+||++||- |.+|++++..|...++ +++.||.+..+. +..+.... . .. ..+..++.++||+||..-
T Consensus 1 ~kIafIGL-G~MG~pmA~~L~~aG~--~v~v~~r~~~ka-~~~~~~~G--a--~~---a~s~~eaa~~aDvVitmv 65 (286)
T COG2084 1 MKIAFIGL-GIMGSPMAANLLKAGH--EVTVYNRTPEKA-AELLAAAG--A--TV---AASPAEAAAEADVVITML 65 (286)
T ss_pred CeEEEEcC-chhhHHHHHHHHHCCC--EEEEEeCChhhh-hHHHHHcC--C--cc---cCCHHHHHHhCCEEEEec
Confidence 58999999 9999999999999998 999999986443 22233211 1 11 123468999999999983
No 168
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=96.90 E-value=0.011 Score=59.29 Aligned_cols=114 Identities=18% Similarity=0.143 Sum_probs=68.3
Q ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchh----HHHHhhcccCCC-eEEEE-eCCCChhhhcC----
Q 017551 18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG----VTADISHMDTGA-VVRGF-LGQPQLENALT---- 87 (369)
Q Consensus 18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g----~~~dL~~~~~~~-~v~~~-~~t~dl~~al~---- 87 (369)
.+.+||.|+||+|++|+.++..|+.++. +|++++.+.... ...++....... .+... +...++.++++
T Consensus 58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~--~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~ 135 (390)
T PLN02657 58 PKDVTVLVVGATGYIGKFVVRELVRRGY--NVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGD 135 (390)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCC
Confidence 3457999999999999999999998887 899999865211 111111111011 11211 11233555666
Q ss_pred CCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551 88 GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 137 (369)
Q Consensus 88 ~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 137 (369)
++|+||.+++.+.. + ..+....|......+.+.+++..-.- ++++|
T Consensus 136 ~~D~Vi~~aa~~~~-~--~~~~~~vn~~~~~~ll~aa~~~gv~r-~V~iS 181 (390)
T PLN02657 136 PVDVVVSCLASRTG-G--VKDSWKIDYQATKNSLDAGREVGAKH-FVLLS 181 (390)
T ss_pred CCcEEEECCccCCC-C--CccchhhHHHHHHHHHHHHHHcCCCE-EEEEe
Confidence 59999998764321 1 11234567777778888887765443 44444
No 169
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=96.89 E-value=0.024 Score=52.69 Aligned_cols=117 Identities=13% Similarity=0.169 Sum_probs=67.6
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCC---hhhh-------cC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENA-------LT 87 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~a-------l~ 87 (369)
++|.|+||+|++|+.++..|++.+. +|+++|.+. ......++.+.....++..+. ..++ ...+ +.
T Consensus 3 k~ilItG~~~~IG~~la~~l~~~g~--~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~ 80 (259)
T PRK12384 3 QVAVVIGGGQTLGAFLCHGLAEEGY--RVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFG 80 (259)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4799999999999999999999887 999999875 222222333211111222221 1122 2222 24
Q ss_pred CCcEEEEcCCCCCCC---CCCHH---HHHHHHHHH----HHHHHHHHhhhCCCeEEEEecCC
Q 017551 88 GMDLVIIPAGVPRKP---GMTRD---DLFNINAGI----VRTLCEGIAKCCPNATVNLISNP 139 (369)
Q Consensus 88 ~ADiVii~ag~p~k~---g~~r~---~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tNP 139 (369)
..|+||..+|.+... ..+.. ..+..|+.- .+.+.+.+.+..+++.++++|..
T Consensus 81 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~ 142 (259)
T PRK12384 81 RVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSK 142 (259)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCc
Confidence 679999999875422 12222 234455543 45555555544445667776653
No 170
>PRK07102 short chain dehydrogenase; Provisional
Probab=96.88 E-value=0.019 Score=52.96 Aligned_cols=115 Identities=19% Similarity=0.063 Sum_probs=67.5
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEeC-CC---Chhhhc----CCCc
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLG-QP---QLENAL----TGMD 90 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~~-t~---dl~~al----~~AD 90 (369)
++|.|+||+|++|..++..|+..+. +|++.|.+.. .....++.... ..++..+.. -+ ++++.+ +..|
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d 78 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGA--RLYLAARDVERLERLADDLRARG-AVAVSTHELDILDTASHAAFLDSLPALPD 78 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCC--EEEEEeCCHHHHHHHHHHHHHhc-CCeEEEEecCCCChHHHHHHHHHHhhcCC
Confidence 5899999999999999999999887 8999998762 22233333211 123333211 12 222222 3459
Q ss_pred EEEEcCCCCCC---CCCCHH---HHHHHHHHHHHHHHHHHhhhC---CCeEEEEecC
Q 017551 91 LVIIPAGVPRK---PGMTRD---DLFNINAGIVRTLCEGIAKCC---PNATVNLISN 138 (369)
Q Consensus 91 iVii~ag~p~k---~g~~r~---~~~~~N~~i~~~i~~~i~~~~---p~a~viv~tN 138 (369)
+||..+|.... .+.+.. +.+..|..-...+.+.+..+. ..+.++++|-
T Consensus 79 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS 135 (243)
T PRK07102 79 IVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISS 135 (243)
T ss_pred EEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEec
Confidence 99998875321 122332 345667666555655554432 3455666653
No 171
>PRK07806 short chain dehydrogenase; Provisional
Probab=96.88 E-value=0.0065 Score=56.12 Aligned_cols=114 Identities=17% Similarity=0.219 Sum_probs=65.7
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc---hhHHHHhhcccCCCeEEEEe-CCCC---hhhhc------
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMDTGAVVRGFL-GQPQ---LENAL------ 86 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~---~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al------ 86 (369)
.++|.|+||+|++|+.++..|+..+. +|++++.+.. .....++.... .++..+. .-+| +..++
T Consensus 6 ~k~vlItGasggiG~~l~~~l~~~G~--~V~~~~r~~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (248)
T PRK07806 6 GKTALVTGSSRGIGADTAKILAGAGA--HVVVNYRQKAPRANKVVAEIEAAG--GRASAVGADLTDEESVAALMDTAREE 81 (248)
T ss_pred CcEEEEECCCCcHHHHHHHHHHHCCC--EEEEEeCCchHhHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHHh
Confidence 35899999999999999999998887 8888887641 12222333211 2222221 1122 22222
Q ss_pred -CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEec
Q 017551 87 -TGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLIS 137 (369)
Q Consensus 87 -~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~t 137 (369)
.+.|+||..+|............+..|......+++.+..+. ..+.++++|
T Consensus 82 ~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~is 134 (248)
T PRK07806 82 FGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVT 134 (248)
T ss_pred CCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEe
Confidence 368999998875422122222334556665666666666553 234565554
No 172
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=96.88 E-value=0.0059 Score=60.15 Aligned_cols=91 Identities=16% Similarity=0.256 Sum_probs=59.6
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV 98 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~ 98 (369)
+.++|+|||. |.+|+.++..|...+. +|+.||.+.... .+. +. + ..++.+++++||+|++..
T Consensus 145 ~g~~VgIIG~-G~IG~~vA~~L~~~G~--~V~~~d~~~~~~--~~~--------~~-~--~~~l~ell~~aDiVil~l-- 206 (330)
T PRK12480 145 KNMTVAIIGT-GRIGAATAKIYAGFGA--TITAYDAYPNKD--LDF--------LT-Y--KDSVKEAIKDADIISLHV-- 206 (330)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC--EEEEEeCChhHh--hhh--------hh-c--cCCHHHHHhcCCEEEEeC--
Confidence 4579999999 9999999999987776 999999875210 000 11 1 346789999999999984
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecC
Q 017551 99 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN 138 (369)
Q Consensus 99 p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tN 138 (369)
|.. ..+..++. ...+....|++++|+++-
T Consensus 207 P~t---------~~t~~li~--~~~l~~mk~gavlIN~aR 235 (330)
T PRK12480 207 PAN---------KESYHLFD--KAMFDHVKKGAILVNAAR 235 (330)
T ss_pred CCc---------HHHHHHHh--HHHHhcCCCCcEEEEcCC
Confidence 321 11112221 122333347888888864
No 173
>PRK07326 short chain dehydrogenase; Provisional
Probab=96.85 E-value=0.014 Score=53.47 Aligned_cols=115 Identities=18% Similarity=0.193 Sum_probs=66.2
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEeC-CC---Chhhhc-------
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLG-QP---QLENAL------- 86 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~~-t~---dl~~al------- 86 (369)
.++|.|+||+|++|+.++..|+..+. +|++++.+.. .....++... ..+..+.+ -+ ++.+++
T Consensus 6 ~~~ilItGatg~iG~~la~~l~~~g~--~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (237)
T PRK07326 6 GKVALITGGSKGIGFAIAEALLAEGY--KVAITARDQKELEEAAAELNNK---GNVLGLAADVRDEADVQRAVDAIVAAF 80 (237)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCC--EEEEeeCCHHHHHHHHHHHhcc---CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 35899999999999999999998877 8999998762 2222333321 12222211 12 222222
Q ss_pred CCCcEEEEcCCCCCCC---CCCHH---HHHHHHHHHHHHHHHHHhhh--CCCeEEEEecCC
Q 017551 87 TGMDLVIIPAGVPRKP---GMTRD---DLFNINAGIVRTLCEGIAKC--CPNATVNLISNP 139 (369)
Q Consensus 87 ~~ADiVii~ag~p~k~---g~~r~---~~~~~N~~i~~~i~~~i~~~--~p~a~viv~tNP 139 (369)
.+.|+||..+|..... ..+.. +.+..|+.....+.+.+.+. ...+.++++|..
T Consensus 81 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~ 141 (237)
T PRK07326 81 GGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSL 141 (237)
T ss_pred CCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECCh
Confidence 3799999998764321 12222 33555655554544444332 234556666643
No 174
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=96.84 E-value=0.0039 Score=53.62 Aligned_cols=120 Identities=18% Similarity=0.205 Sum_probs=71.9
Q ss_pred EEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHH---h--hcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551 23 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTAD---I--SHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 97 (369)
Q Consensus 23 I~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~d---L--~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag 97 (369)
|+|+|+ |.+|+.++..|.+.+. ++.|++... ...... + .+......+.......+..+..+.+|+||++.-
T Consensus 1 I~I~G~-GaiG~~~a~~L~~~g~--~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~viv~vK 76 (151)
T PF02558_consen 1 ILIIGA-GAIGSLYAARLAQAGH--DVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAPSADAGPYDLVIVAVK 76 (151)
T ss_dssp EEEEST-SHHHHHHHHHHHHTTC--EEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSHGHHHSTESEEEE-SS
T ss_pred CEEECc-CHHHHHHHHHHHHCCC--ceEEEEccc-cHHhhhheeEEEEecccceecccccccCcchhccCCCcEEEEEec
Confidence 789999 9999999999999888 999999865 211111 1 111100111211111222246799999999852
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe-chhc
Q 017551 98 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLD 169 (369)
Q Consensus 98 ~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~-t~Ld 169 (369)
.. -..+..+.++.+. |+..++.+-|=++..- .+.+. +|+.+|++- ++..
T Consensus 77 a~----------------~~~~~l~~l~~~~~~~t~iv~~qNG~g~~~-----~l~~~--~~~~~v~~g~~~~g 127 (151)
T PF02558_consen 77 AY----------------QLEQALQSLKPYLDPNTTIVSLQNGMGNEE-----VLAEY--FPRPRVLGGVTTIG 127 (151)
T ss_dssp GG----------------GHHHHHHHHCTGEETTEEEEEESSSSSHHH-----HHHCH--STGSGEEEEEEEEE
T ss_pred cc----------------chHHHHHHHhhccCCCcEEEEEeCCCCcHH-----HHHHH--cCCCcEEEEEEeEe
Confidence 11 1234556677765 6778888888777653 23333 566677644 5533
No 175
>PRK12829 short chain dehydrogenase; Provisional
Probab=96.83 E-value=0.014 Score=54.21 Aligned_cols=36 Identities=31% Similarity=0.523 Sum_probs=32.6
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 56 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~ 56 (369)
+.++|.|+||+|++|+.++..|+.++. +|++++.+.
T Consensus 10 ~~~~vlItGa~g~iG~~~a~~L~~~g~--~V~~~~r~~ 45 (264)
T PRK12829 10 DGLRVLVTGGASGIGRAIAEAFAEAGA--RVHVCDVSE 45 (264)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCC--EEEEEeCCH
Confidence 457999999999999999999999988 899999875
No 176
>PRK08507 prephenate dehydrogenase; Validated
Probab=96.83 E-value=0.009 Score=57.02 Aligned_cols=66 Identities=21% Similarity=0.301 Sum_probs=44.1
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 96 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a 96 (369)
|||+|||. |.+|+.++..|...++..+|+.+|.+.... ..+..... ... ..++.++ .+||+||++.
T Consensus 1 m~I~iIG~-G~mG~sla~~l~~~g~~~~v~~~d~~~~~~--~~~~~~g~---~~~---~~~~~~~-~~aD~Vilav 66 (275)
T PRK08507 1 MKIGIIGL-GLMGGSLGLALKEKGLISKVYGYDHNELHL--KKALELGL---VDE---IVSFEEL-KKCDVIFLAI 66 (275)
T ss_pred CEEEEEcc-CHHHHHHHHHHHhcCCCCEEEEEcCCHHHH--HHHHHCCC---Ccc---cCCHHHH-hcCCEEEEeC
Confidence 58999999 999999999999888655789999875221 11111111 111 1234444 4699999984
No 177
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=96.82 E-value=0.016 Score=53.32 Aligned_cols=115 Identities=17% Similarity=0.203 Sum_probs=66.3
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEeC-CCC---hhhhc-------
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLG-QPQ---LENAL------- 86 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~~-t~d---l~~al------- 86 (369)
.++|.|+||+|++|+.++..|+..+. +|+++|.+.. .....++.... .++..+.. -+| +++++
T Consensus 3 ~~~ilItGas~~iG~~la~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~ 78 (250)
T TIGR03206 3 DKTAIVTGGGGGIGGATCRRFAEEGA--KVAVFDLNREAAEKVAADIRAKG--GNAQAFACDITDRDSVDTAVAAAEQAL 78 (250)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC--EEEEecCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 46899999999999999999999887 8999998762 22223333221 22332211 122 22222
Q ss_pred CCCcEEEEcCCCCCCCC---CCH---HHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecC
Q 017551 87 TGMDLVIIPAGVPRKPG---MTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISN 138 (369)
Q Consensus 87 ~~ADiVii~ag~p~k~g---~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN 138 (369)
...|+||..+|...... .+. ...+..|+.....+.+.+..+ .+...+++++.
T Consensus 79 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss 139 (250)
T TIGR03206 79 GPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIAS 139 (250)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECc
Confidence 35899999988632211 222 233566766555555544321 23344555553
No 178
>PRK12828 short chain dehydrogenase; Provisional
Probab=96.80 E-value=0.011 Score=53.93 Aligned_cols=116 Identities=16% Similarity=0.138 Sum_probs=64.8
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch--hHHHHhhcccCCCeEEEE-eCCCChhhhc-------CCC
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGF-LGQPQLENAL-------TGM 89 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~--g~~~dL~~~~~~~~v~~~-~~t~dl~~al-------~~A 89 (369)
.++|.|+||+|++|+.++..|++++. +|+++|.+..+ ....++..... ..+... ....++.+++ .+.
T Consensus 7 ~k~vlItGatg~iG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~~~~ 83 (239)
T PRK12828 7 GKVVAITGGFGGLGRATAAWLAARGA--RVALIGRGAAPLSQTLPGVPADAL-RIGGIDLVDPQAARRAVDEVNRQFGRL 83 (239)
T ss_pred CCEEEEECCCCcHhHHHHHHHHHCCC--eEEEEeCChHhHHHHHHHHhhcCc-eEEEeecCCHHHHHHHHHHHHHHhCCc
Confidence 46899999999999999999999887 89999987621 22223332111 111111 1112222223 368
Q ss_pred cEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecC
Q 017551 90 DLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISN 138 (369)
Q Consensus 90 DiVii~ag~p~k~---g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN 138 (369)
|+||..+|..... ..+. .+.+..|......+.+.+.+. .+...++++|.
T Consensus 84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS 141 (239)
T PRK12828 84 DALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGA 141 (239)
T ss_pred CEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECc
Confidence 9999998753211 1122 233455655555555544322 23445665553
No 179
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=96.80 E-value=0.011 Score=54.83 Aligned_cols=114 Identities=14% Similarity=0.243 Sum_probs=65.9
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-C---CCChhhhc-------
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-G---QPQLENAL------- 86 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~---t~dl~~al------- 86 (369)
.++|.|+||+|++|+.++..|...+. +|+++|.+.. .....++... ..++..+. . ..++.+++
T Consensus 4 ~~~vlItG~sg~iG~~la~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 79 (258)
T PRK12429 4 GKVALVTGAASGIGLEIALALAKEGA--KVVIADLNDEAAAAAAEALQKA--GGKAIGVAMDVTDEEAINAGIDYAVETF 79 (258)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 35899999999999999999998887 9999998762 2233333321 12222221 1 11222222
Q ss_pred CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecC
Q 017551 87 TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGI----VRTLCEGIAKCCPNATVNLISN 138 (369)
Q Consensus 87 ~~ADiVii~ag~p~k~---g~~r---~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tN 138 (369)
.+.|+||..+|..... ..+. ...+..|..- .+.+.+.+.+... ..++++|.
T Consensus 80 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~iv~iss 140 (258)
T PRK12429 80 GGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGG-GRIINMAS 140 (258)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCC-eEEEEEcc
Confidence 3689999998864321 1111 2234445444 5556666655443 34555543
No 180
>PLN02253 xanthoxin dehydrogenase
Probab=96.80 E-value=0.013 Score=55.42 Aligned_cols=114 Identities=18% Similarity=0.259 Sum_probs=65.3
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhhcC------
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENALT------ 87 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al~------ 87 (369)
.+++.|+||+|++|+.++..|+..|. +|+++|.+.. .....++.. ..++..+. .-+| ..++++
T Consensus 18 ~k~~lItGas~gIG~~la~~l~~~G~--~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 92 (280)
T PLN02253 18 GKVALVTGGATGIGESIVRLFHKHGA--KVCIVDLQDDLGQNVCDSLGG---EPNVCFFHCDVTVEDDVSRAVDFTVDKF 92 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHhcC---CCceEEEEeecCCHHHHHHHHHHHHHHh
Confidence 46899999999999999999999887 9999998752 222222321 12222211 1122 223333
Q ss_pred -CCcEEEEcCCCCCCC-C----CC---HHHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecC
Q 017551 88 -GMDLVIIPAGVPRKP-G----MT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISN 138 (369)
Q Consensus 88 -~ADiVii~ag~p~k~-g----~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN 138 (369)
..|++|..||....+ + .+ ....+..|+.-...+.+.+... ...+.+++++.
T Consensus 93 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS 155 (280)
T PLN02253 93 GTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCS 155 (280)
T ss_pred CCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecC
Confidence 689999999875321 1 12 2344566655444444433322 13455666653
No 181
>PTZ00142 6-phosphogluconate dehydrogenase; Provisional
Probab=96.79 E-value=0.0053 Score=63.26 Aligned_cols=97 Identities=16% Similarity=0.191 Sum_probs=61.7
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhccc--CCCeEEEEeCCCChhhhcC---CCcEEEEc
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD--TGAVVRGFLGQPQLENALT---GMDLVIIP 95 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~--~~~~v~~~~~t~dl~~al~---~ADiVii~ 95 (369)
.+|+|||. |.+|+++|..|+.+++ +|.+||++... +.++.... ....+.. ..+++++++ ++|+|++.
T Consensus 2 ~~IgvIGL-G~MG~~lA~nL~~~G~--~V~v~dr~~~~--~~~l~~~~~~~g~~i~~---~~s~~e~v~~l~~~d~Iil~ 73 (470)
T PTZ00142 2 SDIGLIGL-AVMGQNLALNIASRGF--KISVYNRTYEK--TEEFVKKAKEGNTRVKG---YHTLEELVNSLKKPRKVILL 73 (470)
T ss_pred CEEEEEeE-hHHHHHHHHHHHHCCC--eEEEEeCCHHH--HHHHHHhhhhcCCccee---cCCHHHHHhcCCCCCEEEEE
Confidence 48999999 9999999999999998 99999997622 12222110 0112332 346666665 58988887
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhh-CCCeEEEEecCCC
Q 017551 96 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKC-CPNATVNLISNPV 140 (369)
Q Consensus 96 ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tNPv 140 (369)
.- ++ ..+.++.+.+..+ .|+.+||..+|-.
T Consensus 74 v~----~~-----------~~v~~vi~~l~~~L~~g~iIID~gn~~ 104 (470)
T PTZ00142 74 IK----AG-----------EAVDETIDNLLPLLEKGDIIIDGGNEW 104 (470)
T ss_pred eC----Ch-----------HHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence 31 11 2344444444443 3677888887643
No 182
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=96.76 E-value=0.0065 Score=56.42 Aligned_cols=113 Identities=12% Similarity=0.123 Sum_probs=63.9
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEe-CCCC---hhhh-------cCCC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQ---LENA-------LTGM 89 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~a-------l~~A 89 (369)
|+|.|+||+|++|..++..|...|. +|+++|.+.... ..+.+.. ...+..+. .-+| ++++ +.+.
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~--~V~~~~r~~~~~--~~~~~~~-~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~i 75 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGH--KVIATGRRQERL--QELKDEL-GDNLYIAQLDVRNRAAIEEMLASLPAEWRNI 75 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC--EEEEEECCHHHH--HHHHHHh-ccceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 5899999999999999999998887 899999875211 1111110 11222111 1112 2222 3479
Q ss_pred cEEEEcCCCCC--CC--CCCH---HHHHHHHHHHHHHHHHHHhhhC---CCeEEEEecC
Q 017551 90 DLVIIPAGVPR--KP--GMTR---DDLFNINAGIVRTLCEGIAKCC---PNATVNLISN 138 (369)
Q Consensus 90 DiVii~ag~p~--k~--g~~r---~~~~~~N~~i~~~i~~~i~~~~---p~a~viv~tN 138 (369)
|+||..+|... .+ ..+. ...+..|......+.+.+..++ ..+.++++|.
T Consensus 76 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS 134 (248)
T PRK10538 76 DVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGS 134 (248)
T ss_pred CEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECC
Confidence 99999988642 22 1222 3345666555444444443322 2345666654
No 183
>PRK08818 prephenate dehydrogenase; Provisional
Probab=96.74 E-value=0.011 Score=59.17 Aligned_cols=84 Identities=19% Similarity=0.173 Sum_probs=55.7
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCCC
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP 99 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~p 99 (369)
.++|+|||.+|.||..++..|.+.. ..+|+.+|.+ +. ..+++.+++++||+||++. |
T Consensus 4 ~~~I~IIGl~GliGgslA~alk~~~-~~~V~g~D~~----------d~----------~~~~~~~~v~~aDlVilav--P 60 (370)
T PRK08818 4 QPVVGIVGSAGAYGRWLARFLRTRM-QLEVIGHDPA----------DP----------GSLDPATLLQRADVLIFSA--P 60 (370)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcC-CCEEEEEcCC----------cc----------ccCCHHHHhcCCCEEEEeC--C
Confidence 4599999999999999999999762 3388999973 10 1235567899999999984 3
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEe
Q 017551 100 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI 136 (369)
Q Consensus 100 ~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~ 136 (369)
...+.+++.++++......|+++|.-+
T Consensus 61 ----------v~~~~~~l~~l~~~~~~l~~~~iVtDV 87 (370)
T PRK08818 61 ----------IRHTAALIEEYVALAGGRAAGQLWLDV 87 (370)
T ss_pred ----------HHHHHHHHHHHhhhhcCCCCCeEEEEC
Confidence 234444444444432112456655433
No 184
>PRK05717 oxidoreductase; Validated
Probab=96.73 E-value=0.0055 Score=57.10 Aligned_cols=115 Identities=15% Similarity=0.171 Sum_probs=67.3
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEe-CCCC---hhhh-------cC
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQ---LENA-------LT 87 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~a-------l~ 87 (369)
+.++|.|+||+|++|+.++..|+..+. +|+++|.+....... ..+.. ..+..+. .-++ ..++ +.
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~--~v~~~~~~~~~~~~~-~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 83 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGW--QVVLADLDRERGSKV-AKALG--ENAWFIAMDVADEAQVAAGVAEVLGQFG 83 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCC--EEEEEcCCHHHHHHH-HHHcC--CceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 346899999999999999999998887 899999865221111 11111 1122111 1122 1111 23
Q ss_pred CCcEEEEcCCCCCCC-----CCC---HHHHHHHHHHHHHHHHHHHhhhC--CCeEEEEecC
Q 017551 88 GMDLVIIPAGVPRKP-----GMT---RDDLFNINAGIVRTLCEGIAKCC--PNATVNLISN 138 (369)
Q Consensus 88 ~ADiVii~ag~p~k~-----g~~---r~~~~~~N~~i~~~i~~~i~~~~--p~a~viv~tN 138 (369)
..|+||..+|..... ..+ ....+..|..-...+.+.+..+. ..+.++++|.
T Consensus 84 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS 144 (255)
T PRK05717 84 RLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLAS 144 (255)
T ss_pred CCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcc
Confidence 479999999875321 112 23456777776666666665432 3455666653
No 185
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=96.70 E-value=0.019 Score=53.57 Aligned_cols=74 Identities=18% Similarity=0.200 Sum_probs=48.8
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCC---hhhh-------cC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENA-------LT 87 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~a-------l~ 87 (369)
|+|.|+||+|.+|..++..|+..+. +|++.|.+. ......++.+.. .+..+. .-+| .++. +.
T Consensus 1 m~vlItGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~Dv~d~~~~~~~~~~~~~~~g 75 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKKGA--RVVISSRNEENLEKALKELKEYG---EVYAVKADLSDKDDLKNLVKEAWELLG 75 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhcC---CceEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 5899999999999999999999987 899999876 222333343211 122111 1122 2222 34
Q ss_pred CCcEEEEcCCCC
Q 017551 88 GMDLVIIPAGVP 99 (369)
Q Consensus 88 ~ADiVii~ag~p 99 (369)
..|++|..+|..
T Consensus 76 ~id~li~naG~~ 87 (259)
T PRK08340 76 GIDALVWNAGNV 87 (259)
T ss_pred CCCEEEECCCCC
Confidence 689999999864
No 186
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=96.69 E-value=0.039 Score=50.92 Aligned_cols=116 Identities=17% Similarity=0.225 Sum_probs=66.6
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEe-CCCC---hh-------hhcC
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQ---LE-------NALT 87 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~-~t~d---l~-------~al~ 87 (369)
+.++|.|+||+|++|+.++..|+..+. +|++++.+........+.... ..+..+. .-++ +. +.+.
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~--~vi~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGA--DIVGAGRSEPSETQQQVEALG--RRFLSLTADLSDIEAIKALVDSAVEEFG 79 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEcCchHHHHHHHHHhcC--CceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 356899999999999999999999987 899999765322222232211 2222221 1122 21 1234
Q ss_pred CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHh----hhCCCeEEEEecC
Q 017551 88 GMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIA----KCCPNATVNLISN 138 (369)
Q Consensus 88 ~ADiVii~ag~p~k~---g~~---r~~~~~~N~~i~~~i~~~i~----~~~p~a~viv~tN 138 (369)
..|++|..+|..... ..+ -.+.+..|+.-...+.+.+. +....+.+++++.
T Consensus 80 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS 140 (248)
T TIGR01832 80 HIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIAS 140 (248)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 689999998864211 111 23345666554444444443 3322456666553
No 187
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=96.69 E-value=0.015 Score=54.09 Aligned_cols=116 Identities=16% Similarity=0.230 Sum_probs=68.9
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhh-------c
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENA-------L 86 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~a-------l 86 (369)
.++|.|+||+|++|..++..|+..|. +|++.|.++. ......+... ..++..+. .-+| +.++ +
T Consensus 10 ~k~vlItGa~g~iG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~i~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 85 (255)
T PRK07523 10 GRRALVTGSSQGIGYALAEGLAQAGA--EVILNGRDPAKLAAAAESLKGQ--GLSAHALAFDVTDHDAVRAAIDAFEAEI 85 (255)
T ss_pred CCEEEEECCcchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhc--CceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence 46999999999999999999999887 8999998762 2222233221 12222221 1122 2222 2
Q ss_pred CCCcEEEEcCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHHHhhhC---CCeEEEEecCC
Q 017551 87 TGMDLVIIPAGVPRK-P--GMT---RDDLFNINAGIVRTLCEGIAKCC---PNATVNLISNP 139 (369)
Q Consensus 87 ~~ADiVii~ag~p~k-~--g~~---r~~~~~~N~~i~~~i~~~i~~~~---p~a~viv~tNP 139 (369)
...|+||..+|.+.. + ..+ -...+..|+.-...+.+.+.++. ..+.++++|..
T Consensus 86 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~ 147 (255)
T PRK07523 86 GPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASV 147 (255)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccc
Confidence 457999999886431 1 112 23445677665555555555442 34566766643
No 188
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=96.68 E-value=0.015 Score=54.23 Aligned_cols=109 Identities=16% Similarity=0.106 Sum_probs=62.3
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEe----C-CCChhhhc-CCCcEE
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL----G-QPQLENAL-TGMDLV 92 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~----~-t~dl~~al-~~ADiV 92 (369)
.++||.|+||+|++|+.++..|+.++. +|+++..+...... .+.. ...+..+. . ..++.+++ .++|+|
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~-~~~~---~~~~~~~~~Dl~d~~~~l~~~~~~~~d~v 89 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAKGF--AVKAGVRDVDKAKT-SLPQ---DPSLQIVRADVTEGSDKLVEAIGDDSDAV 89 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhCCC--EEEEEecCHHHHHH-hccc---CCceEEEEeeCCCCHHHHHHHhhcCCCEE
Confidence 357999999999999999999998887 78777665421111 1111 11122111 1 12344666 689999
Q ss_pred EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEe
Q 017551 93 IIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI 136 (369)
Q Consensus 93 ii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~ 136 (369)
|..+|.....+. ......|..-...+.+.+.+.... .++++
T Consensus 90 i~~~g~~~~~~~--~~~~~~n~~~~~~ll~a~~~~~~~-~iV~i 130 (251)
T PLN00141 90 ICATGFRRSFDP--FAPWKVDNFGTVNLVEACRKAGVT-RFILV 130 (251)
T ss_pred EECCCCCcCCCC--CCceeeehHHHHHHHHHHHHcCCC-EEEEE
Confidence 998875432111 111233444455666666655433 34444
No 189
>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=96.67 E-value=0.017 Score=55.92 Aligned_cols=64 Identities=17% Similarity=0.294 Sum_probs=44.5
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCC---CcEEEEcC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTG---MDLVIIPA 96 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~---ADiVii~a 96 (369)
|||+|||. |.+|++++..|...+. +|++||.+.... ..+.+. . ... ..++++.+++ +|+|+++.
T Consensus 1 m~Ig~IGl-G~mG~~mA~~L~~~g~--~v~v~dr~~~~~--~~~~~~--g--~~~---~~s~~~~~~~~~~advVi~~v 67 (299)
T PRK12490 1 MKLGLIGL-GKMGGNMAERLREDGH--EVVGYDVNQEAV--DVAGKL--G--ITA---RHSLEELVSKLEAPRTIWVMV 67 (299)
T ss_pred CEEEEEcc-cHHHHHHHHHHHhCCC--EEEEEECCHHHH--HHHHHC--C--Cee---cCCHHHHHHhCCCCCEEEEEe
Confidence 58999999 9999999999998887 899999875221 222221 1 121 2345566655 68998873
No 190
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=96.67 E-value=0.019 Score=55.65 Aligned_cols=114 Identities=13% Similarity=0.075 Sum_probs=71.1
Q ss_pred EEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHH-----HHhhcc-----cCC-CeEEEEeCC----------C
Q 017551 22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVT-----ADISHM-----DTG-AVVRGFLGQ----------P 80 (369)
Q Consensus 22 KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~-----~dL~~~-----~~~-~~v~~~~~t----------~ 80 (369)
+|.|+||+|++|++++..|+..+...+|+++......... ..+... ... .++....+. .
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~ 80 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA 80 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence 5889999999999999999988754578888876521111 111110 000 244443221 1
Q ss_pred ChhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551 81 QLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 137 (369)
Q Consensus 81 dl~~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 137 (369)
++.+..+++|+||..|+... ......++...|+.....+.+.+.+..... ++++|
T Consensus 81 ~~~~~~~~~d~vih~a~~~~-~~~~~~~~~~~nv~g~~~ll~~a~~~~~~~-~v~iS 135 (367)
T TIGR01746 81 EWERLAENVDTIVHNGALVN-WVYPYSELRAANVLGTREVLRLAASGRAKP-LHYVS 135 (367)
T ss_pred HHHHHHhhCCEEEeCCcEec-cCCcHHHHhhhhhHHHHHHHHHHhhCCCce-EEEEc
Confidence 23445688999999987542 123345566788888888888887765544 44443
No 191
>PRK12939 short chain dehydrogenase; Provisional
Probab=96.64 E-value=0.042 Score=50.49 Aligned_cols=115 Identities=15% Similarity=0.221 Sum_probs=67.5
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCCh---hhhc-------
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQL---ENAL------- 86 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~dl---~~al------- 86 (369)
.++|.|+||+|++|+.++..|...+. ++++++.+.. .....++... ..++..+. .-+|. .+.+
T Consensus 7 ~~~vlItGa~g~iG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 82 (250)
T PRK12939 7 GKRALVTGAARGLGAAFAEALAEAGA--TVAFNDGLAAEARELAAALEAA--GGRAHAIAADLADPASVQRFFDAAAAAL 82 (250)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 46899999999999999999999887 8999988752 2233344322 12333221 11221 1222
Q ss_pred CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecC
Q 017551 87 TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISN 138 (369)
Q Consensus 87 ~~ADiVii~ag~p~k~---g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN 138 (369)
.+.|+||..+|..... ..+. ...+..|..-...+.+.+..+ ...+.++++|.
T Consensus 83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS 143 (250)
T PRK12939 83 GGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLAS 143 (250)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECc
Confidence 5789999998864321 1222 223455666555555554433 23456666654
No 192
>PRK08643 acetoin reductase; Validated
Probab=96.64 E-value=0.035 Score=51.51 Aligned_cols=114 Identities=20% Similarity=0.252 Sum_probs=65.4
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhh-------cC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENA-------LT 87 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~a-------l~ 87 (369)
+++.|+||+|++|..++..|+..+. +|+++|.+.. .....++.+.. ..+..+. .-++ +.++ +.
T Consensus 3 k~~lItGas~giG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 78 (256)
T PRK08643 3 KVALVTGAGQGIGFAIAKRLVEDGF--KVAIVDYNEETAQAAADKLSKDG--GKAIAVKADVSDRDQVFAAVRQVVDTFG 78 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4789999999999999999999887 8999998752 22233343221 2222221 1122 2222 23
Q ss_pred CCcEEEEcCCCCC-CCC--CCH---HHHHHHHHHHH----HHHHHHHhhhCCCeEEEEecC
Q 017551 88 GMDLVIIPAGVPR-KPG--MTR---DDLFNINAGIV----RTLCEGIAKCCPNATVNLISN 138 (369)
Q Consensus 88 ~ADiVii~ag~p~-k~g--~~r---~~~~~~N~~i~----~~i~~~i~~~~p~a~viv~tN 138 (369)
+.|+||..+|... .+- .+. ...+..|+.-. +.+.+.+.+..+++.++++|.
T Consensus 79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS 139 (256)
T PRK08643 79 DLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATS 139 (256)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECc
Confidence 6899999998642 221 111 23345565443 334444443334566777664
No 193
>PRK08265 short chain dehydrogenase; Provisional
Probab=96.64 E-value=0.012 Score=55.24 Aligned_cols=111 Identities=15% Similarity=0.141 Sum_probs=64.0
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhh-------c
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENA-------L 86 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~a-------l 86 (369)
.+++.|+||+|++|..++..|+..|. +|++.|.+.. .....++. .++..+. .-+| ++++ +
T Consensus 6 ~k~vlItGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 78 (261)
T PRK08265 6 GKVAIVTGGATLIGAAVARALVAAGA--RVAIVDIDADNGAAVAASLG-----ERARFIATDITDDAAIERAVATVVARF 78 (261)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhC-----CeeEEEEecCCCHHHHHHHHHHHHHHh
Confidence 45899999999999999999999987 9999998752 11222221 1222211 1122 2222 2
Q ss_pred CCCcEEEEcCCCCCCC--CCCH---HHHHHHHHHHHHHHHHHHhhh--CCCeEEEEec
Q 017551 87 TGMDLVIIPAGVPRKP--GMTR---DDLFNINAGIVRTLCEGIAKC--CPNATVNLIS 137 (369)
Q Consensus 87 ~~ADiVii~ag~p~k~--g~~r---~~~~~~N~~i~~~i~~~i~~~--~p~a~viv~t 137 (369)
...|++|..+|..... ..+. ...+..|+.-...+.+.+..+ .+.+.++++|
T Consensus 79 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~is 136 (261)
T PRK08265 79 GRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFT 136 (261)
T ss_pred CCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEEC
Confidence 4679999999864322 2222 233455655444444433322 3456666665
No 194
>PRK05708 2-dehydropantoate 2-reductase; Provisional
Probab=96.64 E-value=0.032 Score=54.23 Aligned_cols=121 Identities=14% Similarity=0.149 Sum_probs=70.9
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHH--hhcccCCC--eEEEEeCCCChhhhcCCCcEEE
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTAD--ISHMDTGA--VVRGFLGQPQLENALTGMDLVI 93 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~d--L~~~~~~~--~v~~~~~t~dl~~al~~ADiVi 93 (369)
.|||+|+|+ |.||+.++..|...+. +|.|++... ....-.+ +.-..... .+.... .+ .+.....|+||
T Consensus 2 ~m~I~IiGa-GaiG~~~a~~L~~~G~--~V~lv~r~~~~~~~i~~~~Gl~i~~~g~~~~~~~~~-~~--~~~~~~~D~vi 75 (305)
T PRK05708 2 SMTWHILGA-GSLGSLWACRLARAGL--PVRLILRDRQRLAAYQQAGGLTLVEQGQASLYAIPA-ET--ADAAEPIHRLL 75 (305)
T ss_pred CceEEEECC-CHHHHHHHHHHHhCCC--CeEEEEechHHHHHHhhcCCeEEeeCCcceeeccCC-CC--cccccccCEEE
Confidence 479999999 9999999999998886 899999864 1111100 11000011 111111 11 12356889999
Q ss_pred EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhh-CCCeEEEEecCCCCChhHHHHHHHHHhCCCCCCcEEEe-chhc
Q 017551 94 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKC-CPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLD 169 (369)
Q Consensus 94 i~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~kviG~-t~Ld 169 (369)
++.-. .. ..+..+.+..+ .++..|+.+-|=++....+ ++. ++.+++++- +...
T Consensus 76 v~vK~------------~~----~~~al~~l~~~l~~~t~vv~lQNGv~~~e~l-----~~~--~~~~~v~~g~~~~g 130 (305)
T PRK05708 76 LACKA------------YD----AEPAVASLAHRLAPGAELLLLQNGLGSQDAV-----AAR--VPHARCIFASSTEG 130 (305)
T ss_pred EECCH------------Hh----HHHHHHHHHhhCCCCCEEEEEeCCCCCHHHH-----HHh--CCCCcEEEEEeeec
Confidence 98511 11 22334445544 3788888888988876432 333 666777755 4433
No 195
>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=96.63 E-value=0.018 Score=55.71 Aligned_cols=64 Identities=17% Similarity=0.257 Sum_probs=43.9
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcC---CCcEEEEcC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALT---GMDLVIIPA 96 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~---~ADiVii~a 96 (369)
|||+|||. |.+|++++..|...+. +|.+||.+.... .++.+. . +.. ..++.+.++ ++|+|++..
T Consensus 1 m~Ig~IGl-G~MG~~mA~~L~~~g~--~v~v~dr~~~~~--~~~~~~--g--~~~---~~~~~e~~~~~~~~dvvi~~v 67 (301)
T PRK09599 1 MQLGMIGL-GRMGGNMARRLLRGGH--EVVGYDRNPEAV--EALAEE--G--ATG---ADSLEELVAKLPAPRVVWLMV 67 (301)
T ss_pred CEEEEEcc-cHHHHHHHHHHHHCCC--eEEEEECCHHHH--HHHHHC--C--Cee---cCCHHHHHhhcCCCCEEEEEe
Confidence 58999999 9999999999998887 899999986221 222221 1 122 223445454 469988873
No 196
>COG1893 ApbA Ketopantoate reductase [Coenzyme metabolism]
Probab=96.63 E-value=0.012 Score=57.48 Aligned_cols=122 Identities=23% Similarity=0.245 Sum_probs=73.3
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc-hhHHH---HhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTA---DISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 96 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~-~g~~~---dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a 96 (369)
|||+|+|| |.||+.+++.|.+.+. .+.++-..+. ...-. .+.+........... +++ .+.+..+|+||++.
T Consensus 1 mkI~IlGa-GAvG~l~g~~L~~~g~--~V~~~~R~~~~~~l~~~GL~i~~~~~~~~~~~~~-~~~-~~~~~~~Dlviv~v 75 (307)
T COG1893 1 MKILILGA-GAIGSLLGARLAKAGH--DVTLLVRSRRLEALKKKGLRIEDEGGNFTTPVVA-ATD-AEALGPADLVIVTV 75 (307)
T ss_pred CeEEEECC-cHHHHHHHHHHHhCCC--eEEEEecHHHHHHHHhCCeEEecCCCcccccccc-ccC-hhhcCCCCEEEEEe
Confidence 69999999 9999999999999983 6666665442 11111 111111101111111 222 46778999999985
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCChhHHHHHHHHHhCCCCCCc-EEEechhcH
Q 017551 97 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKK-LLGVTMLDV 170 (369)
Q Consensus 97 g~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~i~ae~~~~~~~~~~~k-viG~t~Ld~ 170 (369)
-.. -..+..+.+..+. |+.+|+..=|=.+.. |.+++. ++.++ +.|+|+...
T Consensus 76 Ka~----------------q~~~al~~l~~~~~~~t~vl~lqNG~g~~-----e~l~~~--~~~~~il~G~~~~~a 128 (307)
T COG1893 76 KAY----------------QLEEALPSLAPLLGPNTVVLFLQNGLGHE-----EELRKI--LPKETVLGGVTTHGA 128 (307)
T ss_pred ccc----------------cHHHHHHHhhhcCCCCcEEEEEeCCCcHH-----HHHHHh--CCcceEEEEEeeeee
Confidence 211 1345666777666 667788888888776 334443 45554 457876543
No 197
>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional
Probab=96.63 E-value=0.01 Score=57.44 Aligned_cols=64 Identities=20% Similarity=0.313 Sum_probs=47.3
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 96 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a 96 (369)
+||+|||. |.+|.+++..|+..+. +|.+||++... ..++.... ... .+++.+++++||+||++.
T Consensus 2 ~~Ig~IGl-G~mG~~mA~~l~~~G~--~V~v~d~~~~~--~~~~~~~g----~~~---~~s~~~~~~~aDvVi~~v 65 (296)
T PRK15461 2 AAIAFIGL-GQMGSPMASNLLKQGH--QLQVFDVNPQA--VDALVDKG----ATP---AASPAQAAAGAEFVITML 65 (296)
T ss_pred CeEEEEee-CHHHHHHHHHHHHCCC--eEEEEcCCHHH--HHHHHHcC----Ccc---cCCHHHHHhcCCEEEEec
Confidence 48999999 9999999999999887 99999997622 12222211 111 245678899999999984
No 198
>PRK12367 short chain dehydrogenase; Provisional
Probab=96.61 E-value=0.024 Score=53.11 Aligned_cols=99 Identities=16% Similarity=0.194 Sum_probs=59.7
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEe-CCCChhhhcCCCcEEEEcCCCC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQLENALTGMDLVIIPAGVP 99 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~-~t~dl~~al~~ADiVii~ag~p 99 (369)
+++.|+||+|++|..++..++..|. +++++|.+......... +.. ...+.... ...+..+.+...|++|..||..
T Consensus 15 k~~lITGas~gIG~ala~~l~~~G~--~Vi~~~r~~~~~~~~~~-~~~-~~~~~~D~~~~~~~~~~~~~iDilVnnAG~~ 90 (245)
T PRK12367 15 KRIGITGASGALGKALTKAFRAKGA--KVIGLTHSKINNSESND-ESP-NEWIKWECGKEESLDKQLASLDVLILNHGIN 90 (245)
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCC--EEEEEECCchhhhhhhc-cCC-CeEEEeeCCCHHHHHHhcCCCCEEEECCccC
Confidence 5899999999999999999999987 89999987521111111 110 11122211 1123445677899999999874
Q ss_pred CCCCCCH---HHHHHHHHHHHHHHHHH
Q 017551 100 RKPGMTR---DDLFNINAGIVRTLCEG 123 (369)
Q Consensus 100 ~k~g~~r---~~~~~~N~~i~~~i~~~ 123 (369)
.....+. .+.+..|+.....+++.
T Consensus 91 ~~~~~~~~~~~~~~~vN~~g~~~l~~~ 117 (245)
T PRK12367 91 PGGRQDPENINKALEINALSSWRLLEL 117 (245)
T ss_pred CcCCCCHHHHHHHHHHHhHHHHHHHHH
Confidence 3222332 34456676544444443
No 199
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=96.61 E-value=0.029 Score=56.82 Aligned_cols=102 Identities=22% Similarity=0.229 Sum_probs=61.0
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCC-eEEEE-eCCCChhhhcCCCcEEEEcC
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGA-VVRGF-LGQPQLENALTGMDLVIIPA 96 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~-~v~~~-~~t~dl~~al~~ADiVii~a 96 (369)
+.++|.|+||+|++|+.++..|.++|. +++++|.+... ....+.+..... .+... +..+++.+.+.+.|++|..+
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~--~Vi~l~r~~~~-l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInnA 253 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGA--KVVALTSNSDK-ITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILIINH 253 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCCHHH-HHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEECC
Confidence 457899999999999999999999887 89999986521 111121111111 11111 11123445678999999998
Q ss_pred CCCCCCCCCH---HHHHHHHHHHHHHHHHH
Q 017551 97 GVPRKPGMTR---DDLFNINAGIVRTLCEG 123 (369)
Q Consensus 97 g~p~k~g~~r---~~~~~~N~~i~~~i~~~ 123 (369)
|.......+. ...+..|......+.+.
T Consensus 254 Gi~~~~~~s~e~~~~~~~vNv~g~i~Li~a 283 (406)
T PRK07424 254 GINVHGERTPEAINKSYEVNTFSAWRLMEL 283 (406)
T ss_pred CcCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 8653333332 34456665544444444
No 200
>PRK12491 pyrroline-5-carboxylate reductase; Reviewed
Probab=96.61 E-value=0.011 Score=56.57 Aligned_cols=67 Identities=13% Similarity=0.191 Sum_probs=46.8
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCC--CcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPL--VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 96 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~--~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a 96 (369)
+||++||+ |.+|++++..|.+.+. ..+|..+|.+... ...+.... . ++. .++..+.+++||+||++.
T Consensus 3 ~~IgfIG~-G~MG~aia~~L~~~g~~~~~~I~v~~r~~~~--~~~l~~~~-g--~~~---~~~~~e~~~~aDiIiLav 71 (272)
T PRK12491 3 KQIGFIGC-GNMGIAMIGGMINKNIVSPDQIICSDLNVSN--LKNASDKY-G--ITI---TTNNNEVANSADILILSI 71 (272)
T ss_pred CeEEEECc-cHHHHHHHHHHHHCCCCCCceEEEECCCHHH--HHHHHHhc-C--cEE---eCCcHHHHhhCCEEEEEe
Confidence 58999999 9999999999988774 4579999986522 22222211 1 222 234456789999999985
No 201
>PRK07679 pyrroline-5-carboxylate reductase; Reviewed
Probab=96.60 E-value=0.024 Score=54.29 Aligned_cols=69 Identities=14% Similarity=0.181 Sum_probs=47.3
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCC--CCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINP--LVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 96 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~--~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a 96 (369)
.|||+|||+ |.+|++++..|..++ ...+|.++|.+.. ....++.... .++. +.+..+++++||+||++.
T Consensus 3 ~mkI~~IG~-G~mG~aia~~l~~~g~~~~~~v~v~~r~~~-~~~~~l~~~~---g~~~---~~~~~e~~~~aDvVilav 73 (279)
T PRK07679 3 IQNISFLGA-GSIAEAIIGGLLHANVVKGEQITVSNRSNE-TRLQELHQKY---GVKG---THNKKELLTDANILFLAM 73 (279)
T ss_pred CCEEEEECc-cHHHHHHHHHHHHCCCCCcceEEEECCCCH-HHHHHHHHhc---CceE---eCCHHHHHhcCCEEEEEe
Confidence 479999999 999999999998876 2348899997541 1222333211 1232 234567789999999984
No 202
>PRK08251 short chain dehydrogenase; Provisional
Probab=96.60 E-value=0.094 Score=48.32 Aligned_cols=102 Identities=22% Similarity=0.246 Sum_probs=59.8
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCChh----------hhcC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQLE----------NALT 87 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~dl~----------~al~ 87 (369)
+++.|+||+|++|..++..|..++. +|++.+.+. ......++........+.... .-+|.+ +.+.
T Consensus 3 k~vlItGas~giG~~la~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (248)
T PRK08251 3 QKILITGASSGLGAGMAREFAAKGR--DLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELG 80 (248)
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4799999999999999999998886 899999876 222333333221112333221 122221 2245
Q ss_pred CCcEEEEcCCCCCCCCC---C---HHHHHHHHHHHHHHHHHHH
Q 017551 88 GMDLVIIPAGVPRKPGM---T---RDDLFNINAGIVRTLCEGI 124 (369)
Q Consensus 88 ~ADiVii~ag~p~k~g~---~---r~~~~~~N~~i~~~i~~~i 124 (369)
..|+||..+|....... + -...+..|..-...+.+.+
T Consensus 81 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~ 123 (248)
T PRK08251 81 GLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAA 123 (248)
T ss_pred CCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 78999999987432211 1 1233456655444444443
No 203
>PRK06180 short chain dehydrogenase; Provisional
Probab=96.60 E-value=0.026 Score=53.44 Aligned_cols=113 Identities=13% Similarity=0.090 Sum_probs=65.3
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEe-CCCC---hhhhc-------CC
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------TG 88 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al-------~~ 88 (369)
.++|.|+||+|++|+.++..|+..|. +|++++.+.... .++.... ..++..+. .-+| +.+++ ..
T Consensus 4 ~~~vlVtGasggiG~~la~~l~~~G~--~V~~~~r~~~~~--~~l~~~~-~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~ 78 (277)
T PRK06180 4 MKTWLITGVSSGFGRALAQAALAAGH--RVVGTVRSEAAR--ADFEALH-PDRALARLLDVTDFDAIDAVVADAEATFGP 78 (277)
T ss_pred CCEEEEecCCChHHHHHHHHHHhCcC--EEEEEeCCHHHH--HHHHhhc-CCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 35799999999999999999999887 899999875211 1222111 11222111 1122 22222 35
Q ss_pred CcEEEEcCCCCCC-C--CCCH---HHHHHHHHHHHHHHHHHHhhh---CCCeEEEEec
Q 017551 89 MDLVIIPAGVPRK-P--GMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLIS 137 (369)
Q Consensus 89 ADiVii~ag~p~k-~--g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~t 137 (369)
.|+||..+|.... + ..+. ...+..|+.-...+.+.+..+ ...+.++++|
T Consensus 79 ~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iS 136 (277)
T PRK06180 79 IDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNIT 136 (277)
T ss_pred CCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEe
Confidence 8999999986421 1 2222 233667776666666554332 2234566665
No 204
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=96.59 E-value=0.025 Score=50.54 Aligned_cols=33 Identities=39% Similarity=0.587 Sum_probs=29.7
Q ss_pred EEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551 22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 56 (369)
Q Consensus 22 KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~ 56 (369)
||.|+|+ |.+|+.++..|+..|. .+++|+|.+.
T Consensus 1 ~VlViG~-GglGs~ia~~La~~Gv-g~i~lvD~D~ 33 (174)
T cd01487 1 KVGIAGA-GGLGSNIAVLLARSGV-GNLKLVDFDV 33 (174)
T ss_pred CEEEECc-CHHHHHHHHHHHHcCC-CeEEEEeCCE
Confidence 6899999 9999999999998885 5899999985
No 205
>PRK06182 short chain dehydrogenase; Validated
Probab=96.59 E-value=0.02 Score=53.96 Aligned_cols=113 Identities=13% Similarity=0.096 Sum_probs=65.2
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEE-eCCCChhhhcC-------CCcE
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGF-LGQPQLENALT-------GMDL 91 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~-~~t~dl~~al~-------~ADi 91 (369)
.++|.|+||+|++|+.++..|...+. +|++.+.+.... .++..... .-+... +...++.++++ +.|+
T Consensus 3 ~k~vlItGasggiG~~la~~l~~~G~--~V~~~~r~~~~l--~~~~~~~~-~~~~~Dv~~~~~~~~~~~~~~~~~~~id~ 77 (273)
T PRK06182 3 KKVALVTGASSGIGKATARRLAAQGY--TVYGAARRVDKM--EDLASLGV-HPLSLDVTDEASIKAAVDTIIAEEGRIDV 77 (273)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHH--HHHHhCCC-eEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence 45899999999999999999998887 899999875211 11211110 111211 11122333333 7899
Q ss_pred EEEcCCCCCC-C--CCC---HHHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecC
Q 017551 92 VIIPAGVPRK-P--GMT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISN 138 (369)
Q Consensus 92 Vii~ag~p~k-~--g~~---r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tN 138 (369)
||..+|.... + ..+ ....+..|... .+.+.+.+++... +.++++|.
T Consensus 78 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~-g~iv~isS 133 (273)
T PRK06182 78 LVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRS-GRIINISS 133 (273)
T ss_pred EEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCC-CEEEEEcc
Confidence 9999986421 1 111 23345556543 5556666655543 45566553
No 206
>KOG2305 consensus 3-hydroxyacyl-CoA dehydrogenase [Lipid transport and metabolism]
Probab=96.59 E-value=0.0058 Score=56.62 Aligned_cols=94 Identities=19% Similarity=0.296 Sum_probs=64.8
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC------chhHHHH---hhcc-cCCC------eEEEEeCCCChhh
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN------TPGVTAD---ISHM-DTGA------VVRGFLGQPQLEN 84 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~------~~g~~~d---L~~~-~~~~------~v~~~~~t~dl~~ 84 (369)
-||+|+|. |-+|+..|.+++..|+ +|.||||.+ +.....| |... .... .+..+++|+++.|
T Consensus 4 ~ki~ivgS-gl~g~~WAmlFAs~Gy--qVqlYDI~e~Ql~~ALen~~Kel~~Lee~g~lrGnlsa~eqla~is~t~~l~E 80 (313)
T KOG2305|consen 4 GKIAIVGS-GLVGSSWAMLFASSGY--QVQLYDILEKQLQTALENVEKELRKLEEHGLLRGNLSADEQLALISGTTSLNE 80 (313)
T ss_pred cceeEeec-ccccchHHHHHhccCc--eEEEeeccHHHHHHHHHHHHHHHHHHHHhhhhccCccHHHHHHHHhCCccHHH
Confidence 49999997 9999999999999999 999999987 1222223 3221 1111 2222346789999
Q ss_pred hcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCe
Q 017551 85 ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNA 131 (369)
Q Consensus 85 al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a 131 (369)
..++|=+|-.++ .+.+...+.+.+++++.. |..
T Consensus 81 ~vk~Ai~iQEcv--------------pE~L~lkk~ly~qlD~i~d~~t 114 (313)
T KOG2305|consen 81 LVKGAIHIQECV--------------PEDLNLKKQLYKQLDEIADPTT 114 (313)
T ss_pred HHhhhhhHHhhc--------------hHhhHHHHHHHHHHHHhcCCce
Confidence 999985544442 344667788889999876 443
No 207
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=96.59 E-value=0.013 Score=50.49 Aligned_cols=74 Identities=23% Similarity=0.269 Sum_probs=49.9
Q ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEc
Q 017551 18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP 95 (369)
Q Consensus 18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ 95 (369)
.+.++|.|+|+ |.+|..++..+...+ ..++.++|.+.. ...+.++.... +... ..++.+.++++|+||++
T Consensus 17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g-~~~v~v~~r~~~~~~~~~~~~~~~~----~~~~--~~~~~~~~~~~Dvvi~~ 88 (155)
T cd01065 17 LKGKKVLILGA-GGAARAVAYALAELG-AAKIVIVNRTLEKAKALAERFGELG----IAIA--YLDLEELLAEADLIINT 88 (155)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCC-CCEEEEEcCCHHHHHHHHHHHhhcc----ccee--ecchhhccccCCEEEeC
Confidence 34579999999 999999999998876 458999999762 22222222110 1111 23455668999999998
Q ss_pred CCCC
Q 017551 96 AGVP 99 (369)
Q Consensus 96 ag~p 99 (369)
...+
T Consensus 89 ~~~~ 92 (155)
T cd01065 89 TPVG 92 (155)
T ss_pred cCCC
Confidence 6443
No 208
>PRK12937 short chain dehydrogenase; Provisional
Probab=96.56 E-value=0.022 Score=52.25 Aligned_cols=116 Identities=15% Similarity=0.154 Sum_probs=66.9
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc---hhHHHHhhcccCCCeEEEEe-CCC---Chhhhc-----
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMDTGAVVRGFL-GQP---QLENAL----- 86 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~---~g~~~dL~~~~~~~~v~~~~-~t~---dl~~al----- 86 (369)
+.++|.|+||+|++|+.++..|+..+. ++++++.+.. .....++... ..++..+. .-+ ++++++
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~ 79 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGF--AVAVNYAGSAAAADELVAEIEAA--GGRAIAVQADVADAAAVTRLFDAAET 79 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC--EEEEecCCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 346899999999999999999999987 7777766541 2222223221 12333221 111 223333
Q ss_pred --CCCcEEEEcCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHHHhhh-CCCeEEEEecC
Q 017551 87 --TGMDLVIIPAGVPRK-P--GMT---RDDLFNINAGIVRTLCEGIAKC-CPNATVNLISN 138 (369)
Q Consensus 87 --~~ADiVii~ag~p~k-~--g~~---r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tN 138 (369)
.+.|+||..+|.... + ..+ ....+..|+.....+.+.+.+. .+.+.++++|-
T Consensus 80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss 140 (245)
T PRK12937 80 AFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLST 140 (245)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEee
Confidence 368999999986421 1 111 2334566666555555555433 24556766653
No 209
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=96.55 E-value=0.021 Score=54.98 Aligned_cols=110 Identities=17% Similarity=0.105 Sum_probs=71.6
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC-c--hhHHHHhhcccCCCeEEEEeC-CCChhhhcC--CCcEEEE
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-T--PGVTADISHMDTGAVVRGFLG-QPQLENALT--GMDLVII 94 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~-~--~g~~~dL~~~~~~~~v~~~~~-t~dl~~al~--~ADiVii 94 (369)
|++.|+|++||||+++...+..+..-.+|+.+|.-. + ..-..++.+......++...+ ...+.+.++ +.|.|+.
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vvh 80 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDAVVH 80 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCeEEE
Confidence 589999999999999998777765546788999765 2 222334444322223333221 122334555 6899999
Q ss_pred cCCCCCCC-C-CCHHHHHHHHHHHHHHHHHHHhhhCCC
Q 017551 95 PAGVPRKP-G-MTRDDLFNINAGIVRTLCEGIAKCCPN 130 (369)
Q Consensus 95 ~ag~p~k~-g-~~r~~~~~~N~~i~~~i~~~i~~~~p~ 130 (369)
.|.-.-.- . ....+++..|+--...+.++++++...
T Consensus 81 fAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~ 118 (340)
T COG1088 81 FAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGK 118 (340)
T ss_pred echhccccccccChhhhhhcchHHHHHHHHHHHHhccc
Confidence 86422100 0 124678899999999999999999764
No 210
>PRK05875 short chain dehydrogenase; Provisional
Probab=96.55 E-value=0.039 Score=51.86 Aligned_cols=117 Identities=15% Similarity=0.125 Sum_probs=67.1
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCC---hhhhcC------
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENALT------ 87 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al~------ 87 (369)
.++|.|+||+|++|+.++..|+..+. +|++++.+. ......++.......++..+. .-+| +.+.++
T Consensus 7 ~k~vlItGasg~IG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 84 (276)
T PRK05875 7 DRTYLVTGGGSGIGKGVAAGLVAAGA--AVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWH 84 (276)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 46999999999999999999999988 899999875 222233333211112233221 1112 222333
Q ss_pred -CCcEEEEcCCCCCC--C--CCCH---HHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecC
Q 017551 88 -GMDLVIIPAGVPRK--P--GMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISN 138 (369)
Q Consensus 88 -~ADiVii~ag~p~k--~--g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN 138 (369)
..|+||..+|.... + ..+. ...+..|......+.+.+.++ ...+.++++|.
T Consensus 85 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS 146 (276)
T PRK05875 85 GRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISS 146 (276)
T ss_pred CCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEec
Confidence 68999999885322 1 1222 233455666555555544332 23456666653
No 211
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=96.55 E-value=0.012 Score=54.69 Aligned_cols=115 Identities=19% Similarity=0.235 Sum_probs=66.8
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEE-eCCCChhhh-------cCCC
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGF-LGQPQLENA-------LTGM 89 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~-~~t~dl~~a-------l~~A 89 (369)
.++|.|+||+|++|..++..|+.++. +|+++|.+.. .....++.... ..+... +...+.+++ +...
T Consensus 6 ~~~vlItGas~~iG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (257)
T PRK07067 6 GKVALLTGAASGIGEAVAERYLAEGA--RVVIADIKPARARLAALEIGPAA--IAVSLDVTRQDSIDRIVAAAVERFGGI 81 (257)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCC--EEEEEcCCHHHHHHHHHHhCCce--EEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 35899999999999999999999987 8999998762 22222222110 011111 111122222 2468
Q ss_pred cEEEEcCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHHHhhh----CCCeEEEEecC
Q 017551 90 DLVIIPAGVPRK-P--GMT---RDDLFNINAGIVRTLCEGIAKC----CPNATVNLISN 138 (369)
Q Consensus 90 DiVii~ag~p~k-~--g~~---r~~~~~~N~~i~~~i~~~i~~~----~p~a~viv~tN 138 (369)
|++|..+|.... + ..+ ....+..|+.-...+.+.+..+ ...+.++++|-
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS 140 (257)
T PRK07067 82 DILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMAS 140 (257)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 999999886421 1 112 2334567766665566555433 23456666654
No 212
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=96.54 E-value=0.046 Score=50.49 Aligned_cols=118 Identities=18% Similarity=0.208 Sum_probs=68.7
Q ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEeC--C-CC----------h
Q 017551 18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLG--Q-PQ----------L 82 (369)
Q Consensus 18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~~--t-~d----------l 82 (369)
.+.++|.|+||+|++|..++..|+..+. +|+++|.+. ......++.+... ..+..+.. + .+ +
T Consensus 10 ~~~k~vlItG~~g~iG~~la~~l~~~G~--~Vi~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~ 86 (247)
T PRK08945 10 LKDRIILVTGAGDGIGREAALTYARHGA--TVILLGRTEEKLEAVYDEIEAAGG-PQPAIIPLDLLTATPQNYQQLADTI 86 (247)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCC--cEEEEeCCHHHHHHHHHHHHhcCC-CCceEEEecccCCCHHHHHHHHHHH
Confidence 3557999999999999999999998887 999999876 2233344443221 12221110 0 11 2
Q ss_pred hhhcCCCcEEEEcCCCCCC--C--CCCH---HHHHHHHHHHHHHHHHHHhh---hCCCeEEEEecC
Q 017551 83 ENALTGMDLVIIPAGVPRK--P--GMTR---DDLFNINAGIVRTLCEGIAK---CCPNATVNLISN 138 (369)
Q Consensus 83 ~~al~~ADiVii~ag~p~k--~--g~~r---~~~~~~N~~i~~~i~~~i~~---~~p~a~viv~tN 138 (369)
.+.+...|+||..+|.... + ..+. ...+..|......+.+.+.. ..+...++++|.
T Consensus 87 ~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss 152 (247)
T PRK08945 87 EEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSS 152 (247)
T ss_pred HHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEcc
Confidence 2334568999999886322 1 2222 33456666654444444432 234455666654
No 213
>PRK06928 pyrroline-5-carboxylate reductase; Reviewed
Probab=96.53 E-value=0.03 Score=53.63 Aligned_cols=99 Identities=18% Similarity=0.154 Sum_probs=61.6
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCC--CcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPL--VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV 98 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~--~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~ 98 (369)
+||+|||+ |.+|+.++..|...+. ..+|+++|.+... ....+.... ..+.. +++..++++++|+||++..
T Consensus 2 ~~I~iIG~-G~mG~ala~~L~~~g~~~~~~V~~~~r~~~~-~~~~l~~~~--~~~~~---~~~~~e~~~~aDvVilavp- 73 (277)
T PRK06928 2 EKIGFIGY-GSMADMIATKLLETEVATPEEIILYSSSKNE-HFNQLYDKY--PTVEL---ADNEAEIFTKCDHSFICVP- 73 (277)
T ss_pred CEEEEECc-cHHHHHHHHHHHHCCCCCcccEEEEeCCcHH-HHHHHHHHc--CCeEE---eCCHHHHHhhCCEEEEecC-
Confidence 58999999 9999999999988762 2489999986521 112222211 12222 2455677899999998841
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCC
Q 017551 99 PRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNS 142 (369)
Q Consensus 99 p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~ 142 (369)
| ..+.++++.+..+- ++..++.+.|-+++
T Consensus 74 p---------------~~~~~vl~~l~~~l~~~~~ivS~~aGi~~ 103 (277)
T PRK06928 74 P---------------LAVLPLLKDCAPVLTPDRHVVSIAAGVSL 103 (277)
T ss_pred H---------------HHHHHHHHHHHhhcCCCCEEEEECCCCCH
Confidence 1 22445555565443 45566666665543
No 214
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.53 E-value=0.053 Score=52.27 Aligned_cols=115 Identities=17% Similarity=0.316 Sum_probs=74.3
Q ss_pred CCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCC----------Chh
Q 017551 17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQP----------QLE 83 (369)
Q Consensus 17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~----------dl~ 83 (369)
......|.|+||++++|..+|+.++..+- .++|+|++. ...-+..+.+.. .+..+. .-+ ..+
T Consensus 35 ~v~g~~vLITGgg~GlGr~ialefa~rg~--~~vl~Din~~~~~etv~~~~~~g---~~~~y~cdis~~eei~~~a~~Vk 109 (300)
T KOG1201|consen 35 SVSGEIVLITGGGSGLGRLIALEFAKRGA--KLVLWDINKQGNEETVKEIRKIG---EAKAYTCDISDREEIYRLAKKVK 109 (300)
T ss_pred hccCCEEEEeCCCchHHHHHHHHHHHhCC--eEEEEeccccchHHHHHHHHhcC---ceeEEEecCCCHHHHHHHHHHHH
Confidence 34457999999988999999999999887 999999997 232333333321 222221 111 234
Q ss_pred hhcCCCcEEEEcCCC-CCCCC--CCHHH---HHHHH----HHHHHHHHHHHhhhCCCeEEEEec
Q 017551 84 NALTGMDLVIIPAGV-PRKPG--MTRDD---LFNIN----AGIVRTLCEGIAKCCPNATVNLIS 137 (369)
Q Consensus 84 ~al~~ADiVii~ag~-p~k~g--~~r~~---~~~~N----~~i~~~i~~~i~~~~p~a~viv~t 137 (369)
+...+.|++|..||+ |-++. +++.+ .++.| ...++++.+.|.+.+ ++.|+.++
T Consensus 110 ~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~-~GHIV~Ia 172 (300)
T KOG1201|consen 110 KEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENN-NGHIVTIA 172 (300)
T ss_pred HhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcC-CceEEEeh
Confidence 567899999999996 44443 23322 12233 567788888888764 66555553
No 215
>PRK06914 short chain dehydrogenase; Provisional
Probab=96.52 E-value=0.041 Score=51.88 Aligned_cols=114 Identities=11% Similarity=0.101 Sum_probs=63.8
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCChh---------hhcCC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQLE---------NALTG 88 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~dl~---------~al~~ 88 (369)
+.+.|+||+|++|+.++..|+.++. +|++++.+.. .....++.+......+..+. .-+|.+ +.+..
T Consensus 4 k~~lItGasg~iG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~ 81 (280)
T PRK06914 4 KIAIVTGASSGFGLLTTLELAKKGY--LVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIGR 81 (280)
T ss_pred CEEEEECCCchHHHHHHHHHHhCCC--EEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcCC
Confidence 4689999999999999999999887 8999987652 22222222211112333322 122321 11245
Q ss_pred CcEEEEcCCCCCC--CC-CC---HHHHHHHHHHHHHHHHHH----HhhhCCCeEEEEec
Q 017551 89 MDLVIIPAGVPRK--PG-MT---RDDLFNINAGIVRTLCEG----IAKCCPNATVNLIS 137 (369)
Q Consensus 89 ADiVii~ag~p~k--~g-~~---r~~~~~~N~~i~~~i~~~----i~~~~p~a~viv~t 137 (369)
.|+||..+|.+.. .. .+ -.+.+..|......+.+. +++... +.++++|
T Consensus 82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~iv~vs 139 (280)
T PRK06914 82 IDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKS-GKIINIS 139 (280)
T ss_pred eeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-CEEEEEC
Confidence 7999999886432 11 12 123455666555444444 444433 3444444
No 216
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=96.52 E-value=0.012 Score=49.43 Aligned_cols=72 Identities=25% Similarity=0.310 Sum_probs=46.3
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccC--CCeEEEEeCCCChhhhcCCCcEEEEc
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT--GAVVRGFLGQPQLENALTGMDLVIIP 95 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~--~~~v~~~~~t~dl~~al~~ADiVii~ 95 (369)
|||+|+|++|.+|+.++..+...+-..=+..+|.+.....-.|+.+... ...+.. ++|+++.+..+|+||-.
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v---~~~l~~~~~~~DVvIDf 74 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPV---TDDLEELLEEADVVIDF 74 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBE---BS-HHHHTTH-SEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCccccc---chhHHHhcccCCEEEEc
Confidence 6999999999999999999998664434566777651112223322211 223333 36788999999988876
No 217
>PRK06172 short chain dehydrogenase; Provisional
Probab=96.51 E-value=0.027 Score=52.17 Aligned_cols=114 Identities=14% Similarity=0.104 Sum_probs=65.1
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCC---ChhhhcC------
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQP---QLENALT------ 87 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~---dl~~al~------ 87 (369)
.++|.|+||+|++|+.++..|...+. +|++++.+. ......++.... .++..+. .-+ ++.+.++
T Consensus 7 ~k~ilItGas~~iG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~ 82 (253)
T PRK06172 7 GKVALVTGGAAGIGRATALAFAREGA--KVVVADRDAAGGEETVALIREAG--GEALFVACDVTRDAEVKALVEQTIAAY 82 (253)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 46899999999999999999998887 899999876 222233343221 2233221 112 2223333
Q ss_pred -CCcEEEEcCCCCCCC----CCCH---HHHHHHHHHHHHHHH----HHHhhhCCCeEEEEecC
Q 017551 88 -GMDLVIIPAGVPRKP----GMTR---DDLFNINAGIVRTLC----EGIAKCCPNATVNLISN 138 (369)
Q Consensus 88 -~ADiVii~ag~p~k~----g~~r---~~~~~~N~~i~~~i~----~~i~~~~p~a~viv~tN 138 (369)
..|+||..+|..... ..+. ...+..|+.-...+. +.+.+. ..+.++++|.
T Consensus 83 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~~sS 144 (253)
T PRK06172 83 GRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQ-GGGAIVNTAS 144 (253)
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEECc
Confidence 459999999864321 2222 233456655443333 333332 2345666654
No 218
>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]
Probab=96.51 E-value=0.025 Score=54.43 Aligned_cols=64 Identities=27% Similarity=0.333 Sum_probs=43.0
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchh---HH--HHhhcccCCCeEEEEeCCCC-hhhhcCCCcEEE
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG---VT--ADISHMDTGAVVRGFLGQPQ-LENALTGMDLVI 93 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g---~~--~dL~~~~~~~~v~~~~~t~d-l~~al~~ADiVi 93 (369)
.++|+|+|. |.||..++..|...++ .+..++.+...+ .+ +++.+.. +.+ ..++.++||+||
T Consensus 3 ~~~v~IvG~-GliG~s~a~~l~~~g~--~v~i~g~d~~~~~~~~a~~lgv~d~~----------~~~~~~~~~~~aD~Vi 69 (279)
T COG0287 3 SMKVGIVGL-GLMGGSLARALKEAGL--VVRIIGRDRSAATLKAALELGVIDEL----------TVAGLAEAAAEADLVI 69 (279)
T ss_pred CcEEEEECC-chHHHHHHHHHHHcCC--eEEEEeecCcHHHHHHHhhcCccccc----------ccchhhhhcccCCEEE
Confidence 469999998 9999999999999998 555555554111 11 1111110 122 257789999999
Q ss_pred EcC
Q 017551 94 IPA 96 (369)
Q Consensus 94 i~a 96 (369)
++.
T Consensus 70 vav 72 (279)
T COG0287 70 VAV 72 (279)
T ss_pred Eec
Confidence 983
No 219
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=96.51 E-value=0.052 Score=50.54 Aligned_cols=115 Identities=16% Similarity=0.164 Sum_probs=68.9
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch--hHHHHhhcccCCCeEEEEe-CCCCh---hhh-------c
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFL-GQPQL---ENA-------L 86 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~--g~~~dL~~~~~~~~v~~~~-~t~dl---~~a-------l 86 (369)
.++|.|+||+|++|+.++..|+..+. +|++.|.+... ....++... ..++..+. .-+|. .++ +
T Consensus 12 ~k~ilItGa~g~IG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~i~~~--~~~~~~~~~Dl~d~~~i~~~~~~~~~~~ 87 (259)
T PRK08213 12 GKTALVTGGSRGLGLQIAEALGEAGA--RVVLSARKAEELEEAAAHLEAL--GIDALWIAADVADEADIERLAEETLERF 87 (259)
T ss_pred CCEEEEECCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 46899999999999999999998887 89999987521 122222211 12222221 11222 111 2
Q ss_pred CCCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHhhh----CCCeEEEEecC
Q 017551 87 TGMDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEGIAKC----CPNATVNLISN 138 (369)
Q Consensus 87 ~~ADiVii~ag~p~k~g---~~---r~~~~~~N~~i~~~i~~~i~~~----~p~a~viv~tN 138 (369)
...|+||..+|...... .+ ....+..|+.....+.+.+..+ .+.+.++++|.
T Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS 149 (259)
T PRK08213 88 GHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVAS 149 (259)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECC
Confidence 46799999988632111 11 2344567877777777766554 23455666654
No 220
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=96.50 E-value=0.0024 Score=61.34 Aligned_cols=98 Identities=23% Similarity=0.287 Sum_probs=60.0
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCCCC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPR 100 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~p~ 100 (369)
|||.|+||+|++|+.+...|...+. +++.++... .|+.+... + .++-+.. +.|+||.+|+...
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~~--~v~~~~r~~-----~dl~d~~~---~------~~~~~~~-~pd~Vin~aa~~~ 63 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERGY--EVIATSRSD-----LDLTDPEA---V------AKLLEAF-KPDVVINCAAYTN 63 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTSE--EEEEESTTC-----S-TTSHHH---H------HHHHHHH---SEEEE------
T ss_pred CEEEEECCCCHHHHHHHHHHhhCCC--EEEEeCchh-----cCCCCHHH---H------HHHHHHh-CCCeEeccceeec
Confidence 7999999999999999999998887 888886652 22322110 0 0111222 5899999987643
Q ss_pred CC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551 101 KP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 137 (369)
Q Consensus 101 k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 137 (369)
.. ..........|......+++...+. ++.+|.+|
T Consensus 64 ~~~ce~~p~~a~~iN~~~~~~la~~~~~~--~~~li~~S 100 (286)
T PF04321_consen 64 VDACEKNPEEAYAINVDATKNLAEACKER--GARLIHIS 100 (286)
T ss_dssp HHHHHHSHHHHHHHHTHHHHHHHHHHHHC--T-EEEEEE
T ss_pred HHhhhhChhhhHHHhhHHHHHHHHHHHHc--CCcEEEee
Confidence 11 1235556678899999999988865 45565554
No 221
>PRK06482 short chain dehydrogenase; Provisional
Probab=96.50 E-value=0.024 Score=53.43 Aligned_cols=112 Identities=13% Similarity=0.010 Sum_probs=65.0
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEe-CCCCh---hhh-------cCCC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQL---ENA-------LTGM 89 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~-~t~dl---~~a-------l~~A 89 (369)
++|.|+||+|++|+.++..|+..+. .+++.+.+... ..++.... ...+..+. .-+|. .++ +.+.
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~--~v~~~~r~~~~--~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 77 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGD--RVAATVRRPDA--LDDLKARY-GDRLWVLQLDVTDSAAVRAVVDRAFAALGRI 77 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCC--EEEEEeCCHHH--HHHHHHhc-cCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4799999999999999999999887 88888876511 11121111 11222221 11222 222 3457
Q ss_pred cEEEEcCCCCCCCC-C--C---HHHHHHHHHHHHHHHHHHHhhh---CCCeEEEEec
Q 017551 90 DLVIIPAGVPRKPG-M--T---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLIS 137 (369)
Q Consensus 90 DiVii~ag~p~k~g-~--~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~t 137 (369)
|+||..+|...... + + -...+..|......+.+.+..+ ...+.++++|
T Consensus 78 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~s 134 (276)
T PRK06482 78 DVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVS 134 (276)
T ss_pred CEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEc
Confidence 99999998754221 1 1 2345567777666666665322 2234455554
No 222
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=96.49 E-value=0.011 Score=54.90 Aligned_cols=72 Identities=24% Similarity=0.246 Sum_probs=46.7
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEe-CCCChhhh-cCCCcEEEEcC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQLENA-LTGMDLVIIPA 96 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~-~t~dl~~a-l~~ADiVii~a 96 (369)
|+|+|+|+ |.+|+++|..|...+. +++++|.++..... -+.+.....-+.... ..+-|++| +.++|++|.+-
T Consensus 1 m~iiIiG~-G~vG~~va~~L~~~g~--~Vv~Id~d~~~~~~-~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t 74 (225)
T COG0569 1 MKIIIIGA-GRVGRSVARELSEEGH--NVVLIDRDEERVEE-FLADELDTHVVIGDATDEDVLEEAGIDDADAVVAAT 74 (225)
T ss_pred CEEEEECC-cHHHHHHHHHHHhCCC--ceEEEEcCHHHHHH-HhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEee
Confidence 68999999 9999999999999998 99999998722111 012111011122211 11224444 68999999974
No 223
>PRK07774 short chain dehydrogenase; Provisional
Probab=96.49 E-value=0.037 Score=51.02 Aligned_cols=114 Identities=17% Similarity=0.175 Sum_probs=66.5
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEE-eCCCChh---h-------hc
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGF-LGQPQLE---N-------AL 86 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~-~~t~dl~---~-------al 86 (369)
.+++.|+||+|++|..++..|+..+. +|+++|.+.. .....++.+.. ..+..+ ..-+|.+ + .+
T Consensus 6 ~k~vlItGasg~iG~~la~~l~~~g~--~vi~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (250)
T PRK07774 6 DKVAIVTGAAGGIGQAYAEALAREGA--SVVVADINAEGAERVAKQIVADG--GTAIAVQVDVSDPDSAKAMADATVSAF 81 (250)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 46899999999999999999999887 8999998752 22222332211 122111 1112221 1 12
Q ss_pred CCCcEEEEcCCCCC----CC--CCCH---HHHHHHHHHHHHHHHHHHhhhC---CCeEEEEec
Q 017551 87 TGMDLVIIPAGVPR----KP--GMTR---DDLFNINAGIVRTLCEGIAKCC---PNATVNLIS 137 (369)
Q Consensus 87 ~~ADiVii~ag~p~----k~--g~~r---~~~~~~N~~i~~~i~~~i~~~~---p~a~viv~t 137 (369)
...|+||.++|... .+ ..+. ...+..|......+.+.+..+. +.+.++++|
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~s 144 (250)
T PRK07774 82 GGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQS 144 (250)
T ss_pred CCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEe
Confidence 46899999998632 11 1222 2345567666555555555442 234566655
No 224
>PRK07024 short chain dehydrogenase; Provisional
Probab=96.49 E-value=0.015 Score=54.34 Aligned_cols=111 Identities=23% Similarity=0.174 Sum_probs=63.2
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhhc-------C
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------T 87 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al-------~ 87 (369)
++|.|+||+|++|..++..|++.+. +|+++|.+.. .....++... .++..+. .-+| +.+++ .
T Consensus 3 ~~vlItGas~gIG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~i~~~~~~~~~~~g 77 (257)
T PRK07024 3 LKVFITGASSGIGQALAREYARQGA--TLGLVARRTDALQAFAARLPKA---ARVSVYAADVRDADALAAAAADFIAAHG 77 (257)
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHhcccC---CeeEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 5899999999999999999999887 8999998752 2222222211 1233221 1122 22222 2
Q ss_pred CCcEEEEcCCCCCCCC----CC---HHHHHHHHHHHHHH----HHHHHhhhCCCeEEEEec
Q 017551 88 GMDLVIIPAGVPRKPG----MT---RDDLFNINAGIVRT----LCEGIAKCCPNATVNLIS 137 (369)
Q Consensus 88 ~ADiVii~ag~p~k~g----~~---r~~~~~~N~~i~~~----i~~~i~~~~p~a~viv~t 137 (369)
..|++|..+|...... .+ ....+..|+.-... +.+.+.+... +.+++++
T Consensus 78 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~-~~iv~is 137 (257)
T PRK07024 78 LPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARR-GTLVGIA 137 (257)
T ss_pred CCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCC-CEEEEEe
Confidence 3699999988643211 12 22344555544433 4445554443 4455554
No 225
>PRK06181 short chain dehydrogenase; Provisional
Probab=96.48 E-value=0.033 Score=51.92 Aligned_cols=115 Identities=17% Similarity=0.174 Sum_probs=67.4
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCCh---hhhc-------C
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQL---ENAL-------T 87 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~dl---~~al-------~ 87 (369)
++|.|+||+|++|+.++..|+.++. +|+++|.+.. .....++.... ..+..+. .-+|. .+++ .
T Consensus 2 ~~vlVtGasg~iG~~la~~l~~~g~--~Vi~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 77 (263)
T PRK06181 2 KVVIITGASEGIGRALAVRLARAGA--QLVLAARNETRLASLAQELADHG--GEALVVPTDVSDAEACERLIEAAVARFG 77 (263)
T ss_pred CEEEEecCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4799999999999999999998887 8999998752 22233343322 2333221 11222 2222 3
Q ss_pred CCcEEEEcCCCCCCCC---C-CH---HHHHHHHHHHHHHHHHHHhhhC--CCeEEEEecCC
Q 017551 88 GMDLVIIPAGVPRKPG---M-TR---DDLFNINAGIVRTLCEGIAKCC--PNATVNLISNP 139 (369)
Q Consensus 88 ~ADiVii~ag~p~k~g---~-~r---~~~~~~N~~i~~~i~~~i~~~~--p~a~viv~tNP 139 (369)
+.|+||..+|...... . +. ...+..|+.....+.+.+..+. ..+.++++|..
T Consensus 78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~ 138 (263)
T PRK06181 78 GIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSL 138 (263)
T ss_pred CCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecc
Confidence 6899999988643211 1 22 2335667666666666554332 23456665543
No 226
>PRK05866 short chain dehydrogenase; Provisional
Probab=96.48 E-value=0.043 Score=52.67 Aligned_cols=76 Identities=20% Similarity=0.282 Sum_probs=49.1
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCC---hhhhc-------
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL------- 86 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al------- 86 (369)
.++|.|+||+|++|..++..|+.++. +|+++|.+. ......++... ...+..+. .-+| ..+++
T Consensus 40 ~k~vlItGasggIG~~la~~La~~G~--~Vi~~~R~~~~l~~~~~~l~~~--~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 115 (293)
T PRK05866 40 GKRILLTGASSGIGEAAAEQFARRGA--TVVAVARREDLLDAVADRITRA--GGDAMAVPCDLSDLDAVDALVADVEKRI 115 (293)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 36899999999999999999999887 999999876 22222223211 11222221 1112 22233
Q ss_pred CCCcEEEEcCCCC
Q 017551 87 TGMDLVIIPAGVP 99 (369)
Q Consensus 87 ~~ADiVii~ag~p 99 (369)
.+.|+||..+|..
T Consensus 116 g~id~li~~AG~~ 128 (293)
T PRK05866 116 GGVDILINNAGRS 128 (293)
T ss_pred CCCCEEEECCCCC
Confidence 3789999998864
No 227
>PLN02256 arogenate dehydrogenase
Probab=96.47 E-value=0.022 Score=55.45 Aligned_cols=65 Identities=20% Similarity=0.238 Sum_probs=45.6
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhc-CCCcEEEEcC
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENAL-TGMDLVIIPA 96 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al-~~ADiVii~a 96 (369)
+.+||+|||+ |.+|+.++..+...+. +|+.+|.+.....+.++ . +.. .++.++.+ .++|+||++.
T Consensus 35 ~~~kI~IIG~-G~mG~slA~~L~~~G~--~V~~~d~~~~~~~a~~~-----g--v~~---~~~~~e~~~~~aDvVilav 100 (304)
T PLN02256 35 RKLKIGIVGF-GNFGQFLAKTFVKQGH--TVLATSRSDYSDIAAEL-----G--VSF---FRDPDDFCEEHPDVVLLCT 100 (304)
T ss_pred CCCEEEEEee-CHHHHHHHHHHHhCCC--EEEEEECccHHHHHHHc-----C--Cee---eCCHHHHhhCCCCEEEEec
Confidence 4579999998 9999999999988775 89999987522222211 1 122 23455555 4799999984
No 228
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=96.47 E-value=0.022 Score=52.06 Aligned_cols=114 Identities=18% Similarity=0.323 Sum_probs=64.7
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhhc-------
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENAL------- 86 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al------- 86 (369)
.++|.|+||+|++|+.++..|..++. +|.+++.+.. .....++... ..++..+. .-+| +.+++
T Consensus 5 ~~~ilItGasg~iG~~l~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (246)
T PRK05653 5 GKTALVTGASRGIGRAIALRLAADGA--KVVIYDSNEEAAEALAAELRAA--GGEARVLVFDVSDEAAVRALIEAAVEAF 80 (246)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence 46899999999999999999999887 7999998762 2222333321 12222211 1112 22223
Q ss_pred CCCcEEEEcCCCCCC-C--CCCH---HHHHHHHHHHHHHHHHHHhhh---CCCeEEEEec
Q 017551 87 TGMDLVIIPAGVPRK-P--GMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLIS 137 (369)
Q Consensus 87 ~~ADiVii~ag~p~k-~--g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~t 137 (369)
...|.||..+|.-.. + ..+. ...+..|......+.+.+..+ .....++++|
T Consensus 81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~s 140 (246)
T PRK05653 81 GALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNIS 140 (246)
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEC
Confidence 346999999875211 1 1222 234556666666555555432 2223455555
No 229
>PLN02996 fatty acyl-CoA reductase
Probab=96.47 E-value=0.055 Score=56.13 Aligned_cols=109 Identities=17% Similarity=0.145 Sum_probs=69.3
Q ss_pred CCCCEEEEEcCCCccHHHHHHHHHh-CCCCcEEEEEeCCCc----h-hHHHHhhccc----------------CCCeEEE
Q 017551 18 AAGFKVAILGAAGGIGQPLAMLMKI-NPLVSVLHLYDVVNT----P-GVTADISHMD----------------TGAVVRG 75 (369)
Q Consensus 18 ~~~~KI~IiGA~G~vGs~la~~l~~-~~~~~el~L~D~~~~----~-g~~~dL~~~~----------------~~~~v~~ 75 (369)
-+.+.|.|+||+|++|+.++..|+. .+-+.+|+++..... . ....++.... ...++..
T Consensus 9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~ 88 (491)
T PLN02996 9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP 88 (491)
T ss_pred hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence 3456899999999999999987765 455678888776541 1 1111111100 0134444
Q ss_pred EeCC-C---------C-hhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhh
Q 017551 76 FLGQ-P---------Q-LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKC 127 (369)
Q Consensus 76 ~~~t-~---------d-l~~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~ 127 (369)
..+. + + +.+.++++|+||..|+... ...........|+.....+.+.+.+.
T Consensus 89 i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~-~~~~~~~~~~~Nv~gt~~ll~~a~~~ 150 (491)
T PLN02996 89 VPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTN-FDERYDVALGINTLGALNVLNFAKKC 150 (491)
T ss_pred EecccCCcCCCCChHHHHHHHHhCCCEEEECccccC-CcCCHHHHHHHHHHHHHHHHHHHHhc
Confidence 3321 1 1 3456689999999987543 23345667788999999998888764
No 230
>PLN02780 ketoreductase/ oxidoreductase
Probab=96.46 E-value=0.042 Score=53.67 Aligned_cols=115 Identities=16% Similarity=0.212 Sum_probs=65.7
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe--CCCC-------hhhhcC-
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL--GQPQ-------LENALT- 87 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~--~t~d-------l~~al~- 87 (369)
...+.|+||+|++|..++..|+..|. +|+++|++. ......++.......++..+. -+++ +.+.+.
T Consensus 53 g~~~lITGAs~GIG~alA~~La~~G~--~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~ 130 (320)
T PLN02780 53 GSWALVTGPTDGIGKGFAFQLARKGL--NLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEG 130 (320)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC--CEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcC
Confidence 46899999999999999999999987 899999987 233344443321111222111 0112 122333
Q ss_pred -CCcEEEEcCCCCCC---C--CCCH---HHHHHHHHHHHHHHHHH----HhhhCCCeEEEEec
Q 017551 88 -GMDLVIIPAGVPRK---P--GMTR---DDLFNINAGIVRTLCEG----IAKCCPNATVNLIS 137 (369)
Q Consensus 88 -~ADiVii~ag~p~k---~--g~~r---~~~~~~N~~i~~~i~~~----i~~~~p~a~viv~t 137 (369)
|.|++|..||.... + ..+. ...+..|......+.+. +.+. ..+.++++|
T Consensus 131 ~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~~g~IV~iS 192 (320)
T PLN02780 131 LDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIINIG 192 (320)
T ss_pred CCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhc-CCcEEEEEe
Confidence 45589999986421 1 1222 23456665544444444 4333 345566654
No 231
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=96.46 E-value=0.025 Score=52.58 Aligned_cols=114 Identities=21% Similarity=0.282 Sum_probs=65.4
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhh-------c
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENA-------L 86 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~a-------l 86 (369)
.+++.|+||+|++|..++..|+..+. ++++.|.+.. .....++.+.. ..+..+. .-+| +.+. +
T Consensus 9 ~k~~lItGas~giG~~ia~~L~~~G~--~vvl~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 84 (254)
T PRK08085 9 GKNILITGSAQGIGFLLATGLAEYGA--EIIINDITAERAELAVAKLRQEG--IKAHAAPFNVTHKQEVEAAIEHIEKDI 84 (254)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCC--EEEEEcCCHHHHHHHHHHHHhcC--CeEEEEecCCCCHHHHHHHHHHHHHhc
Confidence 45899999999999999999999887 9999998762 22333343321 1222211 1122 1111 2
Q ss_pred CCCcEEEEcCCCCC-CC--CCC---HHHHHHHHHHHHHHHHHHHhhh---CCCeEEEEec
Q 017551 87 TGMDLVIIPAGVPR-KP--GMT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLIS 137 (369)
Q Consensus 87 ~~ADiVii~ag~p~-k~--g~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~t 137 (369)
...|+||..+|... .+ ..+ ....+..|......+.+.+..+ ...+.++++|
T Consensus 85 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~is 144 (254)
T PRK08085 85 GPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINIC 144 (254)
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEc
Confidence 45799999998632 11 122 2334566655544444444433 2335566654
No 232
>PRK07814 short chain dehydrogenase; Provisional
Probab=96.45 E-value=0.045 Score=51.28 Aligned_cols=116 Identities=16% Similarity=0.188 Sum_probs=68.1
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCChh---hh-------
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQLE---NA------- 85 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~dl~---~a------- 85 (369)
+.+++.|+||+|++|..++..|+.++. +|++.|.+.. .....++... ...+..+. .-++.+ ++
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~ 84 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGA--DVLIAARTESQLDEVAEQIRAA--GRRAHVVAADLAHPEATAGLAGQAVEA 84 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 346899999999999999999998887 9999998752 2223333221 12233221 122321 12
Q ss_pred cCCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHh----hhCCCeEEEEecC
Q 017551 86 LTGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIA----KCCPNATVNLISN 138 (369)
Q Consensus 86 l~~ADiVii~ag~p~k~---g~~---r~~~~~~N~~i~~~i~~~i~----~~~p~a~viv~tN 138 (369)
+...|+||..||..... ..+ ....+..|......+.+... +..+.+.++++|.
T Consensus 85 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS 147 (263)
T PRK07814 85 FGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISS 147 (263)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEcc
Confidence 23689999998853211 122 23345566555555554443 3345566666654
No 233
>PRK09135 pteridine reductase; Provisional
Probab=96.44 E-value=0.037 Score=50.78 Aligned_cols=104 Identities=18% Similarity=0.179 Sum_probs=62.3
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC---chhHHHHhhcccCCCeEEEEe-CCCC---hhhhc------
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL------ 86 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~---~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al------ 86 (369)
.++|.|+||+|++|++++..|+.++. +|+++|... ......++.+... ..+..+. .-+| +..++
T Consensus 6 ~~~vlItGa~g~iG~~l~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~ 82 (249)
T PRK09135 6 AKVALITGGARRIGAAIARTLHAAGY--RVAIHYHRSAAEADALAAELNALRP-GSAAALQADLLDPDALPELVAACVAA 82 (249)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhhcC-CceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 36899999999999999999999887 999999754 2222333433211 1122211 1122 22233
Q ss_pred -CCCcEEEEcCCCCC--CCC-CC---HHHHHHHHHHHHHHHHHHHhh
Q 017551 87 -TGMDLVIIPAGVPR--KPG-MT---RDDLFNINAGIVRTLCEGIAK 126 (369)
Q Consensus 87 -~~ADiVii~ag~p~--k~g-~~---r~~~~~~N~~i~~~i~~~i~~ 126 (369)
.+.|+||..+|... ... .+ ..+.+..|+.....+.+.+..
T Consensus 83 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~ 129 (249)
T PRK09135 83 FGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAP 129 (249)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHH
Confidence 35799999988522 111 12 244566777766666666554
No 234
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=96.42 E-value=0.012 Score=50.05 Aligned_cols=35 Identities=29% Similarity=0.396 Sum_probs=30.8
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 56 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~ 56 (369)
..||+|+|+ |.+|+.++..|+..|. .++.|+|-+.
T Consensus 2 ~~~v~iiG~-G~vGs~va~~L~~~Gv-~~i~lvD~d~ 36 (135)
T PF00899_consen 2 NKRVLIIGA-GGVGSEVAKNLARSGV-GKITLVDDDI 36 (135)
T ss_dssp T-EEEEEST-SHHHHHHHHHHHHHTT-SEEEEEESSB
T ss_pred CCEEEEECc-CHHHHHHHHHHHHhCC-CceeecCCcc
Confidence 469999999 9999999999998885 6999999875
No 235
>PRK05650 short chain dehydrogenase; Provisional
Probab=96.42 E-value=0.037 Score=52.03 Aligned_cols=113 Identities=19% Similarity=0.139 Sum_probs=64.7
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCCh---hhh-------cC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQL---ENA-------LT 87 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~dl---~~a-------l~ 87 (369)
++|.|+||+|++|+.++..|...+. +|++.|.+.. .....++.... .++..+. .-+|. .+. +.
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~--~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~i~~~~~ 76 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGW--RLALADVNEEGGEETLKLLREAG--GDGFYQRCDVRDYSQLTALAQACEEKWG 76 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4789999999999999999999887 8999998762 22233343221 1222221 11222 222 24
Q ss_pred CCcEEEEcCCCCCCC---CCCH---HHHHHHHHH----HHHHHHHHHhhhCCCeEEEEecC
Q 017551 88 GMDLVIIPAGVPRKP---GMTR---DDLFNINAG----IVRTLCEGIAKCCPNATVNLISN 138 (369)
Q Consensus 88 ~ADiVii~ag~p~k~---g~~r---~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tN 138 (369)
..|+||..+|..... ..+. ...+..|.. +.+.+.+.+.+.. .+.++++|.
T Consensus 77 ~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS 136 (270)
T PRK05650 77 GIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQK-SGRIVNIAS 136 (270)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC-CCEEEEECC
Confidence 689999998864321 1222 224456643 4444444455443 345666553
No 236
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=96.42 E-value=0.02 Score=52.30 Aligned_cols=35 Identities=29% Similarity=0.490 Sum_probs=31.1
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 56 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~ 56 (369)
..||.|+|+ |.+|+.++..|+..|. .+|.|+|.+.
T Consensus 21 ~~~VlviG~-GglGs~ia~~La~~Gv-~~i~lvD~d~ 55 (202)
T TIGR02356 21 NSHVLIIGA-GGLGSPAALYLAGAGV-GTIVIVDDDH 55 (202)
T ss_pred CCCEEEECC-CHHHHHHHHHHHHcCC-CeEEEecCCE
Confidence 359999999 9999999999999884 5999999884
No 237
>PRK05876 short chain dehydrogenase; Provisional
Probab=96.41 E-value=0.041 Score=52.28 Aligned_cols=115 Identities=18% Similarity=0.169 Sum_probs=66.0
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCC---hhhh-------c
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENA-------L 86 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~a-------l 86 (369)
.+.+.|+||+|++|+.++..|+..|. +|++.|.+. ......++... ..++..+. .-+| +.+. +
T Consensus 6 ~k~vlVTGas~gIG~ala~~La~~G~--~Vv~~~r~~~~l~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 81 (275)
T PRK05876 6 GRGAVITGGASGIGLATGTEFARRGA--RVVLGDVDKPGLRQAVNHLRAE--GFDVHGVMCDVRHREEVTHLADEAFRLL 81 (275)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc--CCeEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 34799999999999999999999987 899999876 22223334321 12233221 1122 2222 2
Q ss_pred CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHH----HHHHHHhhhCCCeEEEEecC
Q 017551 87 TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVR----TLCEGIAKCCPNATVNLISN 138 (369)
Q Consensus 87 ~~ADiVii~ag~p~k~---g~~r---~~~~~~N~~i~~----~i~~~i~~~~p~a~viv~tN 138 (369)
...|+||..||..... ..+. ...+..|..... .+.+.+.+....+.++++|.
T Consensus 82 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS 143 (275)
T PRK05876 82 GHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTAS 143 (275)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCC
Confidence 3579999999874311 1222 233456654444 44444444443455666653
No 238
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.41 E-value=0.068 Score=51.42 Aligned_cols=121 Identities=18% Similarity=0.244 Sum_probs=81.3
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe----CCCChh-------hhc
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL----GQPQLE-------NAL 86 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~----~t~dl~-------~al 86 (369)
.+.|.|+|||.+||.++|+.++..|. .++|+.... ++.+..++.......++.... ..++.+ ..+
T Consensus 12 ~kvVvITGASsGIG~~lA~~la~~G~--~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~f 89 (282)
T KOG1205|consen 12 GKVVLITGASSGIGEALAYELAKRGA--KLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHF 89 (282)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHhCCC--ceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhc
Confidence 45889999999999999999999997 788888765 333334454433211122211 112222 356
Q ss_pred CCCcEEEEcCCCCCCCC-CC------HHHHHHHH----HHHHHHHHHHHhhhCCCeEEEEecCCCCChh
Q 017551 87 TGMDLVIIPAGVPRKPG-MT------RDDLFNIN----AGIVRTLCEGIAKCCPNATVNLISNPVNSTV 144 (369)
Q Consensus 87 ~~ADiVii~ag~p~k~g-~~------r~~~~~~N----~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t 144 (369)
.+.|+.|..||+.+ .+ .+ ....++.| +-..+...+.+.+.. ++.|++++...+.+.
T Consensus 90 g~vDvLVNNAG~~~-~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~-~GhIVvisSiaG~~~ 156 (282)
T KOG1205|consen 90 GRVDVLVNNAGISL-VGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRN-DGHIVVISSIAGKMP 156 (282)
T ss_pred CCCCEEEecCcccc-ccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcC-CCeEEEEeccccccC
Confidence 89999999999988 43 11 22344555 677888888888877 898888887776554
No 239
>PRK06841 short chain dehydrogenase; Provisional
Probab=96.41 E-value=0.027 Score=52.25 Aligned_cols=113 Identities=20% Similarity=0.351 Sum_probs=65.1
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc-hhHHHHhhcccCCCeEEEEe-CCCC---hhhh-------c
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFL-GQPQ---LENA-------L 86 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~-~g~~~dL~~~~~~~~v~~~~-~t~d---l~~a-------l 86 (369)
+.++|.|+||+|++|+.++..|++.+. +|++.+.+.. .....++.. ..+..+. .-++ +.+. +
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~----~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGA--RVALLDRSEDVAEVAAQLLG----GNAKGLVCDVSDSQSVEAAVAAVISAF 87 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHhhC----CceEEEEecCCCHHHHHHHHHHHHHHh
Confidence 346899999999999999999999887 8999998752 112222221 1111111 1122 2222 2
Q ss_pred CCCcEEEEcCCCCC-CCC--CCH---HHHHHHHHHHHHHHHHHHhhh---CCCeEEEEec
Q 017551 87 TGMDLVIIPAGVPR-KPG--MTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLIS 137 (369)
Q Consensus 87 ~~ADiVii~ag~p~-k~g--~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~t 137 (369)
...|+||..+|... .+- .+. ...+..|..-...+.+.+..+ ...+.++++|
T Consensus 88 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~s 147 (255)
T PRK06841 88 GRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLA 147 (255)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEc
Confidence 36799999988643 111 111 234566666555555555433 1245566655
No 240
>PRK07069 short chain dehydrogenase; Validated
Probab=96.40 E-value=0.075 Score=48.91 Aligned_cols=114 Identities=23% Similarity=0.279 Sum_probs=66.8
Q ss_pred EEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCC-C--chhHHHHhhcccCCCe---EEEE-eCCCChh-------hhcC
Q 017551 22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV-N--TPGVTADISHMDTGAV---VRGF-LGQPQLE-------NALT 87 (369)
Q Consensus 22 KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~-~--~~g~~~dL~~~~~~~~---v~~~-~~t~dl~-------~al~ 87 (369)
||.|+||+|++|..++..|+..+. +|++.|.+ . ......++........ +... +...++. +.+.
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 78 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQGA--KVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMG 78 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence 589999999999999999999887 89999987 3 2222223322111111 1111 1111121 2235
Q ss_pred CCcEEEEcCCCCCCC---CCC---HHHHHHHHHH----HHHHHHHHHhhhCCCeEEEEecC
Q 017551 88 GMDLVIIPAGVPRKP---GMT---RDDLFNINAG----IVRTLCEGIAKCCPNATVNLISN 138 (369)
Q Consensus 88 ~ADiVii~ag~p~k~---g~~---r~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tN 138 (369)
..|+||..+|..... ..+ ....+..|+. ..+.+.+.+.+... ..++++|.
T Consensus 79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-~~ii~~ss 138 (251)
T PRK07069 79 GLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQP-ASIVNISS 138 (251)
T ss_pred CccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCC-cEEEEecC
Confidence 689999999864321 112 2334566766 66777777776543 44555553
No 241
>PRK09291 short chain dehydrogenase; Provisional
Probab=96.39 E-value=0.076 Score=49.12 Aligned_cols=76 Identities=17% Similarity=0.204 Sum_probs=48.1
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch--hHHHHhhcccCCCeEEEEe----CCCChhhhcC-CCcEEE
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFL----GQPQLENALT-GMDLVI 93 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~--g~~~dL~~~~~~~~v~~~~----~t~dl~~al~-~ADiVi 93 (369)
++|.|+||+|++|+.++..|++.+. ++++.+.+... ....+.... ...+.... ...++..++. +.|+||
T Consensus 3 ~~vlVtGasg~iG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~id~vi 78 (257)
T PRK09291 3 KTILITGAGSGFGREVALRLARKGH--NVIAGVQIAPQVTALRAEAARR--GLALRVEKLDLTDAIDRAQAAEWDVDVLL 78 (257)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc--CCcceEEEeeCCCHHHHHHHhcCCCCEEE
Confidence 3799999999999999999999887 88888876521 111111111 11222211 1123334444 899999
Q ss_pred EcCCCCC
Q 017551 94 IPAGVPR 100 (369)
Q Consensus 94 i~ag~p~ 100 (369)
..+|.+.
T Consensus 79 ~~ag~~~ 85 (257)
T PRK09291 79 NNAGIGE 85 (257)
T ss_pred ECCCcCC
Confidence 9998653
No 242
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=96.39 E-value=0.039 Score=50.66 Aligned_cols=113 Identities=19% Similarity=0.286 Sum_probs=65.6
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEeC-CCC---hhhhc-------
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLG-QPQ---LENAL------- 86 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~~-t~d---l~~al------- 86 (369)
.++|.|+||+|++|..++..|..++. +|++++.+.. .....++... ..++..+.+ -+| +.+.+
T Consensus 6 ~~~ilItGasg~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (251)
T PRK12826 6 GRVALVTGAARGIGRAIAVRLAADGA--EVIVVDICGDDAAATAELVEAA--GGKARARQVDVRDRAALKAAVAAGVEDF 81 (251)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 46899999999999999999999887 8999998752 2222333322 123333221 112 22222
Q ss_pred CCCcEEEEcCCCCCC-C--CCCH---HHHHHHHHHHHHHHHHHH----hhhCCCeEEEEec
Q 017551 87 TGMDLVIIPAGVPRK-P--GMTR---DDLFNINAGIVRTLCEGI----AKCCPNATVNLIS 137 (369)
Q Consensus 87 ~~ADiVii~ag~p~k-~--g~~r---~~~~~~N~~i~~~i~~~i----~~~~p~a~viv~t 137 (369)
...|+||..+|.... + ..+. ...+..|+.-...+.+.+ .+.. ...++++|
T Consensus 82 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~s 141 (251)
T PRK12826 82 GRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAG-GGRIVLTS 141 (251)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEEe
Confidence 368999999876431 1 2222 234556665555555444 3333 34455554
No 243
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=96.38 E-value=0.035 Score=54.31 Aligned_cols=92 Identities=21% Similarity=0.287 Sum_probs=61.1
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV 98 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~ 98 (369)
+.++|+|+|. |.||+.++..|..-|. +|..||...... ..+..+....++++.+++||+|++..
T Consensus 135 ~g~tvgIvG~-G~IG~~vA~~l~afG~--~V~~~~~~~~~~-----------~~~~~~~~~~~l~e~l~~aDvvv~~l-- 198 (312)
T PRK15469 135 EDFTIGILGA-GVLGSKVAQSLQTWGF--PLRCWSRSRKSW-----------PGVQSFAGREELSAFLSQTRVLINLL-- 198 (312)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCC--EEEEEeCCCCCC-----------CCceeecccccHHHHHhcCCEEEECC--
Confidence 4579999999 9999999999997777 999999753110 00111111346889999999999984
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551 99 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 137 (369)
Q Consensus 99 p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 137 (369)
|.. ..|-.++. .+.++...|++++|+++
T Consensus 199 Plt---------~~T~~li~--~~~l~~mk~ga~lIN~a 226 (312)
T PRK15469 199 PNT---------PETVGIIN--QQLLEQLPDGAYLLNLA 226 (312)
T ss_pred CCC---------HHHHHHhH--HHHHhcCCCCcEEEECC
Confidence 321 12222232 23444455889888886
No 244
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=96.38 E-value=0.011 Score=53.20 Aligned_cols=76 Identities=20% Similarity=0.233 Sum_probs=49.9
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEE--eCCCChhhhcCCCcEEEE
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGF--LGQPQLENALTGMDLVII 94 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~--~~t~dl~~al~~ADiVii 94 (369)
+.+++.|+||+|.+|+.++..|...+. ++.+++.+.. .....++.+.. ...+... ....++.++++++|+||.
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~--~V~l~~R~~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~diVi~ 103 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGA--RVVLVGRDLERAQKAADSLRARF-GEGVGAVETSDDAARAAAIKGADVVFA 103 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHhhc-CCcEEEeeCCCHHHHHHHHhcCCEEEE
Confidence 457999999889999999999988775 9999998752 22222232211 1223321 112334578999999888
Q ss_pred cCC
Q 017551 95 PAG 97 (369)
Q Consensus 95 ~ag 97 (369)
+..
T Consensus 104 at~ 106 (194)
T cd01078 104 AGA 106 (194)
T ss_pred CCC
Confidence 753
No 245
>PRK07832 short chain dehydrogenase; Provisional
Probab=96.38 E-value=0.11 Score=48.81 Aligned_cols=115 Identities=19% Similarity=0.148 Sum_probs=65.8
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCC-e-EEEEeCCCCh----------hhhc
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGA-V-VRGFLGQPQL----------ENAL 86 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~-~-v~~~~~t~dl----------~~al 86 (369)
+++.|+||+|++|..++..|+..+. +|++++.+. ......++....... . +... -+|. .+.+
T Consensus 1 k~vlItGas~giG~~la~~la~~G~--~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D--~~~~~~~~~~~~~~~~~~ 76 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGA--ELFLTDRDADGLAQTVADARALGGTVPEHRALD--ISDYDAVAAFAADIHAAH 76 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEee--CCCHHHHHHHHHHHHHhc
Confidence 3799999999999999999998886 899999875 222233333221111 1 1111 1121 1223
Q ss_pred CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHH----hhhCCCeEEEEecCC
Q 017551 87 TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGI----AKCCPNATVNLISNP 139 (369)
Q Consensus 87 ~~ADiVii~ag~p~k~---g~~r---~~~~~~N~~i~~~i~~~i----~~~~p~a~viv~tNP 139 (369)
...|+||..+|..... ..+. ...+..|..-...+.+.+ .+....+.++++|-.
T Consensus 77 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~ 139 (272)
T PRK07832 77 GSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSA 139 (272)
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccc
Confidence 5689999999864321 1222 334566665555555443 332334566666543
No 246
>PF03949 Malic_M: Malic enzyme, NAD binding domain; InterPro: IPR012302 Malic enzymes (malate oxidoreductases) catalyse the oxidative decarboxylation of malate to form pyruvate [], a reaction important in a number of metabolic pathways - e.g. carbon dioxide released from the reaction may be used in sugar production during the Calvin cycle of photosynthesis []. There are 3 forms of the enzyme []: an NAD-dependent form that decarboxylates oxaloacetate; an NAD-dependent form that does not decarboxylate oxalo-acetate; and an NADPH-dependent form []. Other proteins known to be similar to malic enzymes are the Escherichia coli scfA protein; an enzyme from Zea mays (Maize), formerly thought to be cinnamyl-alcohol dehydrogenase []; and the hypothetical Saccharomyces cerevisiae protein YKL029c. Studies on the duck liver malic enzyme reveals that it can be alkylated by bromopyruvate, resulting in the loss of oxidative decarboxylation and the subsequent enhancement of pyruvate reductase activity []. The alkylated form is able to bind NADPH but not L-malate, indicating impaired substrate-or divalent metal ion-binding in the active site []. Sequence analysis has highlighted a cysteine residue as the point of alkylation, suggesting that it may play an important role in the activity of the enzyme [], although it is absent in the sequences from some species. There are three well conserved regions in the enzyme sequences. Two of them seem to be involved in the binding NAD or NADP. The significance of the third one, located in the central part of the enzymes, is not yet known.; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 2DVM_B 1WW8_A 3NV9_A 1PJ2_A 1PJL_B 1GZ3_A 1PJ4_A 1PJ3_C 1EFL_A 1EFK_B ....
Probab=96.35 E-value=0.014 Score=55.34 Aligned_cols=106 Identities=21% Similarity=0.280 Sum_probs=71.2
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhC----CCC-----cEEEEEeCCC--chhH------HHHhhcccCCCeEEEEeCCCCh
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKIN----PLV-----SVLHLYDVVN--TPGV------TADISHMDTGAVVRGFLGQPQL 82 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~----~~~-----~el~L~D~~~--~~g~------~~dL~~~~~~~~v~~~~~t~dl 82 (369)
..||++.|| |..|..++.+|... |+- +++.|+|.+. ..+. ...+.+... .... ..++
T Consensus 25 d~riv~~GA-GsAg~gia~ll~~~~~~~G~~~~eA~~~i~lvD~~Gll~~~r~~l~~~~~~~a~~~~--~~~~---~~~L 98 (255)
T PF03949_consen 25 DQRIVFFGA-GSAGIGIARLLVAAMVREGLSEEEARKRIWLVDSKGLLTDDREDLNPHKKPFARKTN--PEKD---WGSL 98 (255)
T ss_dssp G-EEEEEB--SHHHHHHHHHHHHHHHCTTS-HHHHHTTEEEEETTEEEBTTTSSHSHHHHHHHBSSS--TTT-----SSH
T ss_pred HcEEEEeCC-ChhHHHHHHHHHHHHHHhcCCHHHHhccEEEEeccceEeccCccCChhhhhhhccCc--cccc---ccCH
Confidence 469999999 99999999877654 663 7899999986 1221 122222211 1111 1478
Q ss_pred hhhcCCC--cEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCC--ChhH
Q 017551 83 ENALTGM--DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN--STVP 145 (369)
Q Consensus 83 ~~al~~A--DiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~--~~t~ 145 (369)
.++++++ |++|=+.|.| | -+-+++.+.|.++|++.+|+=.|||.. -+++
T Consensus 99 ~eav~~~kPtvLIG~S~~~---g-----------~ft~evv~~Ma~~~erPIIF~LSNPt~~aE~~p 151 (255)
T PF03949_consen 99 LEAVKGAKPTVLIGLSGQG---G-----------AFTEEVVRAMAKHNERPIIFPLSNPTPKAECTP 151 (255)
T ss_dssp HHHHHCH--SEEEECSSST---T-----------SS-HHHHHHCHHHSSSEEEEE-SSSCGGSSS-H
T ss_pred HHHHHhcCCCEEEEecCCC---C-----------cCCHHHHHHHhccCCCCEEEECCCCCCcccCCH
Confidence 9999999 9999887654 3 234588899999999999988999987 4554
No 247
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=96.35 E-value=0.025 Score=55.13 Aligned_cols=99 Identities=19% Similarity=0.264 Sum_probs=64.7
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch--hHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 96 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~--g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a 96 (369)
..++|+|+|+ |.+|..++..+...+ ..+|.++|.+..+ ..+..+. ..+.. .+++.+++.++|+||.+.
T Consensus 177 ~~~~V~ViGa-G~iG~~~a~~L~~~g-~~~V~v~~r~~~ra~~la~~~g-----~~~~~---~~~~~~~l~~aDvVi~at 246 (311)
T cd05213 177 KGKKVLVIGA-GEMGELAAKHLAAKG-VAEITIANRTYERAEELAKELG-----GNAVP---LDELLELLNEADVVISAT 246 (311)
T ss_pred cCCEEEEECc-HHHHHHHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHcC-----CeEEe---HHHHHHHHhcCCEEEECC
Confidence 4689999999 999999998888754 3489999987522 2222221 12211 235678899999999997
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHH-Hhhh-CCCeEEEEecCCCCCh
Q 017551 97 GVPRKPGMTRDDLFNINAGIVRTLCEG-IAKC-CPNATVNLISNPVNST 143 (369)
Q Consensus 97 g~p~k~g~~r~~~~~~N~~i~~~i~~~-i~~~-~p~a~viv~tNPv~~~ 143 (369)
+.|.. .++... +... ....+++-+++|-|+=
T Consensus 247 ~~~~~----------------~~~~~~~~~~~~~~~~~viDlavPrdi~ 279 (311)
T cd05213 247 GAPHY----------------AKIVERAMKKRSGKPRLIVDLAVPRDIE 279 (311)
T ss_pred CCCch----------------HHHHHHHHhhCCCCCeEEEEeCCCCCCc
Confidence 66531 111111 1111 2456888999999865
No 248
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=96.34 E-value=0.024 Score=52.62 Aligned_cols=117 Identities=14% Similarity=0.145 Sum_probs=67.6
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCC---Chhhhc------
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQP---QLENAL------ 86 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~---dl~~al------ 86 (369)
..++|.|+||+|++|+.++..|+..+. +|+++|.+. ......++.... .++.... .-+ ++..++
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~ 85 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGA--HVLVNGRNAATLEAAVAALRAAG--GAAEALAFDIADEEAVAAAFARIDAE 85 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHhcC--CceEEEEccCCCHHHHHHHHHHHHHh
Confidence 356899999999999999999998887 999999976 223333343211 1222221 112 222222
Q ss_pred -CCCcEEEEcCCCCCC-C--CCCH---HHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecCC
Q 017551 87 -TGMDLVIIPAGVPRK-P--GMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISNP 139 (369)
Q Consensus 87 -~~ADiVii~ag~p~k-~--g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNP 139 (369)
...|+||..+|.... + ..+. ...+..|+.-...+++.+.++ ...+.++++|..
T Consensus 86 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~ 148 (256)
T PRK06124 86 HGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSI 148 (256)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeec
Confidence 345899999886321 1 1222 234566666555555444332 234556666654
No 249
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=96.34 E-value=0.026 Score=52.59 Aligned_cols=115 Identities=21% Similarity=0.300 Sum_probs=66.0
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEe-CCCC---hhhh-------cCC
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQ---LENA-------LTG 88 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~a-------l~~ 88 (369)
.+++.|+||+|+||..++..|+..|. +|++++.+........+... ..++..+. .-+| ..+. +..
T Consensus 8 ~k~~lItGas~gIG~aia~~l~~~G~--~vv~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 83 (251)
T PRK12481 8 GKVAIITGCNTGLGQGMAIGLAKAGA--DIVGVGVAEAPETQAQVEAL--GRKFHFITADLIQQKDIDSIVSQAVEVMGH 83 (251)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEecCchHHHHHHHHHHc--CCeEEEEEeCCCCHHHHHHHHHHHHHHcCC
Confidence 45899999999999999999999988 89999876532222222221 12222211 1122 2222 245
Q ss_pred CcEEEEcCCCCCCC---CCC---HHHHHHHHHH----HHHHHHHHHhhhCCCeEEEEecC
Q 017551 89 MDLVIIPAGVPRKP---GMT---RDDLFNINAG----IVRTLCEGIAKCCPNATVNLISN 138 (369)
Q Consensus 89 ADiVii~ag~p~k~---g~~---r~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tN 138 (369)
.|++|..+|..... ..+ ....+..|+. +.+.+.+.+.+....+.|++++.
T Consensus 84 iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS 143 (251)
T PRK12481 84 IDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIAS 143 (251)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCC
Confidence 79999999874321 112 2334556644 34445555544433466766654
No 250
>PRK07890 short chain dehydrogenase; Provisional
Probab=96.34 E-value=0.061 Score=49.83 Aligned_cols=116 Identities=16% Similarity=0.163 Sum_probs=67.3
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhh-------h
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LEN-------A 85 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~-------a 85 (369)
..++|.|+||+|+||+.++..|+.++. +|+++|.+.. .....++.... .++..+. .-+| ++. .
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARAGA--DVVLAARTAERLDEVAAEIDDLG--RRALAVPTDITDEDQCANLVALALER 79 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHHhC--CceEEEecCCCCHHHHHHHHHHHHHH
Confidence 356899999999999999999999998 9999998762 22223332211 1222211 1122 211 2
Q ss_pred cCCCcEEEEcCCCCC--CC--CCCH---HHHHHHHHHHHHHHHHHHhhhC--CCeEEEEecC
Q 017551 86 LTGMDLVIIPAGVPR--KP--GMTR---DDLFNINAGIVRTLCEGIAKCC--PNATVNLISN 138 (369)
Q Consensus 86 l~~ADiVii~ag~p~--k~--g~~r---~~~~~~N~~i~~~i~~~i~~~~--p~a~viv~tN 138 (369)
+...|+||..+|... ++ ..+. ...+..|+.-...+.+.+..+- ....++++|.
T Consensus 80 ~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS 141 (258)
T PRK07890 80 FGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINS 141 (258)
T ss_pred cCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEec
Confidence 346899999998632 22 2222 3345566655555555554331 1245666653
No 251
>PRK06179 short chain dehydrogenase; Provisional
Probab=96.34 E-value=0.041 Score=51.60 Aligned_cols=111 Identities=15% Similarity=0.143 Sum_probs=62.9
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEE-eCCCChhhhcC-------CCcE
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGF-LGQPQLENALT-------GMDL 91 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~-~~t~dl~~al~-------~ADi 91 (369)
..+|.|+||+|++|+.++..|+..+. +|++.+.+...... ..+. ..+... +...+++++++ ..|+
T Consensus 4 ~~~vlVtGasg~iG~~~a~~l~~~g~--~V~~~~r~~~~~~~--~~~~---~~~~~D~~d~~~~~~~~~~~~~~~g~~d~ 76 (270)
T PRK06179 4 SKVALVTGASSGIGRATAEKLARAGY--RVFGTSRNPARAAP--IPGV---ELLELDVTDDASVQAAVDEVIARAGRIDV 76 (270)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCC--EEEEEeCChhhccc--cCCC---eeEEeecCCHHHHHHHHHHHHHhCCCCCE
Confidence 35899999999999999999999887 89999987521110 0010 111111 11123334443 4699
Q ss_pred EEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHH----HhhhCCCeEEEEecC
Q 017551 92 VIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEG----IAKCCPNATVNLISN 138 (369)
Q Consensus 92 Vii~ag~p~k~g---~~---r~~~~~~N~~i~~~i~~~----i~~~~p~a~viv~tN 138 (369)
||..+|...... .+ ....+..|..-...+.+. +.+.. .+.++++|.
T Consensus 77 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~iv~isS 132 (270)
T PRK06179 77 LVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQG-SGRIINISS 132 (270)
T ss_pred EEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEECC
Confidence 999998753221 11 234455565444444443 44443 345666554
No 252
>PRK05884 short chain dehydrogenase; Provisional
Probab=96.33 E-value=0.019 Score=52.78 Aligned_cols=34 Identities=15% Similarity=0.220 Sum_probs=31.1
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 56 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~ 56 (369)
||+.|+||+|++|+.++..|...+. +|+++|.+.
T Consensus 1 m~vlItGas~giG~~ia~~l~~~g~--~v~~~~r~~ 34 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRNDGH--KVTLVGARR 34 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHHCCC--EEEEEeCCH
Confidence 5899999999999999999998887 899999875
No 253
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=96.33 E-value=0.03 Score=50.44 Aligned_cols=104 Identities=19% Similarity=0.166 Sum_probs=62.3
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCCCC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPR 100 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~p~ 100 (369)
|||+||||+|.+|+.++...+.+|+ |+.-+=.+..+-.+ +.. .+-.+-..+ ..+.+.+++.|-|+||.+-|.+.
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGH--eVTAivRn~~K~~~--~~~-~~i~q~Dif-d~~~~a~~l~g~DaVIsA~~~~~ 74 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGH--EVTAIVRNASKLAA--RQG-VTILQKDIF-DLTSLASDLAGHDAVISAFGAGA 74 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCCC--eeEEEEeChHhccc--ccc-ceeeccccc-ChhhhHhhhcCCceEEEeccCCC
Confidence 7999999999999999999999999 88888777522111 010 000111122 13445678999999999866543
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551 101 KPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 137 (369)
Q Consensus 101 k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 137 (369)
++. +.+ -.+....+...++.. -...++++.
T Consensus 75 -~~~--~~~---~~k~~~~li~~l~~a-gv~RllVVG 104 (211)
T COG2910 75 -SDN--DEL---HSKSIEALIEALKGA-GVPRLLVVG 104 (211)
T ss_pred -CCh--hHH---HHHHHHHHHHHHhhc-CCeeEEEEc
Confidence 221 111 122244444555433 345566664
No 254
>PLN02712 arogenate dehydrogenase
Probab=96.33 E-value=0.027 Score=60.64 Aligned_cols=68 Identities=16% Similarity=0.131 Sum_probs=47.2
Q ss_pred CCCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhc-CCCcEEEE
Q 017551 16 GGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENAL-TGMDLVII 94 (369)
Q Consensus 16 ~~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al-~~ADiVii 94 (369)
..++++||+|||. |.+|..++..|...+. +|..+|.+.....+.++ .+.. .+++.+.+ ++||+||+
T Consensus 48 ~~~~~~kIgIIG~-G~mG~slA~~L~~~G~--~V~~~dr~~~~~~A~~~-------Gv~~---~~d~~e~~~~~aDvViL 114 (667)
T PLN02712 48 DNTTQLKIAIIGF-GNYGQFLAKTLISQGH--TVLAHSRSDHSLAARSL-------GVSF---FLDPHDLCERHPDVILL 114 (667)
T ss_pred ccCCCCEEEEEcc-CHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHc-------CCEE---eCCHHHHhhcCCCEEEE
Confidence 3455689999998 9999999999998886 89999987422111111 1222 23455534 57999999
Q ss_pred cC
Q 017551 95 PA 96 (369)
Q Consensus 95 ~a 96 (369)
+.
T Consensus 115 av 116 (667)
T PLN02712 115 CT 116 (667)
T ss_pred cC
Confidence 84
No 255
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=96.32 E-value=0.037 Score=51.03 Aligned_cols=35 Identities=34% Similarity=0.472 Sum_probs=31.1
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 56 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~ 56 (369)
..||+|+|+ |.+|+.++..|+..|. .++.|+|.+.
T Consensus 28 ~~~V~ViG~-GglGs~ia~~La~~Gv-g~i~lvD~D~ 62 (212)
T PRK08644 28 KAKVGIAGA-GGLGSNIAVALARSGV-GNLKLVDFDV 62 (212)
T ss_pred CCCEEEECc-CHHHHHHHHHHHHcCC-CeEEEEeCCE
Confidence 459999999 9999999999998885 5899999983
No 256
>PRK06924 short chain dehydrogenase; Provisional
Probab=96.32 E-value=0.036 Score=51.26 Aligned_cols=34 Identities=18% Similarity=0.167 Sum_probs=30.8
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 56 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~ 56 (369)
++|.|+||+|++|+.++..|++++. +|++++.+.
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~--~V~~~~r~~ 35 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGT--HVISISRTE 35 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCC--EEEEEeCCc
Confidence 4799999999999999999999887 899999865
No 257
>PRK07063 short chain dehydrogenase; Provisional
Probab=96.31 E-value=0.076 Score=49.45 Aligned_cols=116 Identities=22% Similarity=0.251 Sum_probs=66.0
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCC---hhhhc-------
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL------- 86 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al------- 86 (369)
.+.+.|+||+|++|..++..|+..|. +|+++|.+. ......++.......++..+. .-+| +.+++
T Consensus 7 ~k~vlVtGas~gIG~~~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 84 (260)
T PRK07063 7 GKVALVTGAAQGIGAAIARAFAREGA--AVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAF 84 (260)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 45899999999999999999999987 899999876 223333343211112232221 1122 22222
Q ss_pred CCCcEEEEcCCCCCC-C-C-CCH---HHHHHHHHHHH----HHHHHHHhhhCCCeEEEEecC
Q 017551 87 TGMDLVIIPAGVPRK-P-G-MTR---DDLFNINAGIV----RTLCEGIAKCCPNATVNLISN 138 (369)
Q Consensus 87 ~~ADiVii~ag~p~k-~-g-~~r---~~~~~~N~~i~----~~i~~~i~~~~p~a~viv~tN 138 (369)
...|++|..+|.... + . .+. ...+..|+... +.+.+.+.+. ..+.|+++|-
T Consensus 85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~isS 145 (260)
T PRK07063 85 GPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVER-GRGSIVNIAS 145 (260)
T ss_pred CCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhh-CCeEEEEECC
Confidence 368999999986421 1 1 122 23344555444 4444444433 3456666653
No 258
>PRK06057 short chain dehydrogenase; Provisional
Probab=96.31 E-value=0.023 Score=52.90 Aligned_cols=35 Identities=23% Similarity=0.259 Sum_probs=31.8
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 56 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~ 56 (369)
.++|.|+||+|++|..++..+++.+. +|+++|.+.
T Consensus 7 ~~~vlItGasggIG~~~a~~l~~~G~--~v~~~~r~~ 41 (255)
T PRK06057 7 GRVAVITGGGSGIGLATARRLAAEGA--TVVVGDIDP 41 (255)
T ss_pred CCEEEEECCCchHHHHHHHHHHHcCC--EEEEEeCCH
Confidence 45899999999999999999999887 899999875
No 259
>PRK08278 short chain dehydrogenase; Provisional
Probab=96.30 E-value=0.17 Score=47.76 Aligned_cols=116 Identities=19% Similarity=0.231 Sum_probs=65.9
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch---------hHHHHhhcccCCCeEEEEe-C---CCChhhhc
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP---------GVTADISHMDTGAVVRGFL-G---QPQLENAL 86 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~---------g~~~dL~~~~~~~~v~~~~-~---t~dl~~al 86 (369)
.+++.|+||+|++|+.++..|++++. +|+++|.+... ..+.++... ..++..+. . +.++.+.+
T Consensus 6 ~k~vlItGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~ 81 (273)
T PRK08278 6 GKTLFITGASRGIGLAIALRAARDGA--NIVIAAKTAEPHPKLPGTIHTAAEEIEAA--GGQALPLVGDVRDEDQVAAAV 81 (273)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEecccccccchhhHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHH
Confidence 45899999999999999999999887 89999986411 112223221 11222211 1 12222233
Q ss_pred -------CCCcEEEEcCCCCCC-C--CCCH---HHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecCC
Q 017551 87 -------TGMDLVIIPAGVPRK-P--GMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISNP 139 (369)
Q Consensus 87 -------~~ADiVii~ag~p~k-~--g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNP 139 (369)
...|+||..+|.... + ..+. ...+..|+.-...+.+.+..+ ...+.++++|-+
T Consensus 82 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~ 150 (273)
T PRK08278 82 AKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPP 150 (273)
T ss_pred HHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCc
Confidence 367999999986321 1 2232 223455655444444444332 234666666643
No 260
>PRK06128 oxidoreductase; Provisional
Probab=96.30 E-value=0.051 Score=52.15 Aligned_cols=115 Identities=23% Similarity=0.272 Sum_probs=68.8
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc----hhHHHHhhcccCCCeEEEEe-CCCC---hhh-------
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT----PGVTADISHMDTGAVVRGFL-GQPQ---LEN------- 84 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~----~g~~~dL~~~~~~~~v~~~~-~t~d---l~~------- 84 (369)
.++|.|+||+|++|..++..|+..+. +|++.+.+.. ......+... ..++..+. .-+| .++
T Consensus 55 ~k~vlITGas~gIG~~~a~~l~~~G~--~V~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~ 130 (300)
T PRK06128 55 GRKALITGADSGIGRATAIAFAREGA--DIALNYLPEEEQDAAEVVQLIQAE--GRKAVALPGDLKDEAFCRQLVERAVK 130 (300)
T ss_pred CCEEEEecCCCcHHHHHHHHHHHcCC--EEEEEeCCcchHHHHHHHHHHHHc--CCeEEEEecCCCCHHHHHHHHHHHHH
Confidence 36899999999999999999999887 8888776431 1122222221 12222221 1122 112
Q ss_pred hcCCCcEEEEcCCCCC--CC--CCC---HHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecC
Q 017551 85 ALTGMDLVIIPAGVPR--KP--GMT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISN 138 (369)
Q Consensus 85 al~~ADiVii~ag~p~--k~--g~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tN 138 (369)
.+...|++|..+|... .+ ..+ ....+..|+.-...+++.+..+. +.+.++++|.
T Consensus 131 ~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS 192 (300)
T PRK06128 131 ELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGS 192 (300)
T ss_pred HhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECC
Confidence 2346899999998642 22 122 34456778777767777766553 3456666654
No 261
>PRK12827 short chain dehydrogenase; Provisional
Probab=96.28 E-value=0.078 Score=48.58 Aligned_cols=102 Identities=21% Similarity=0.335 Sum_probs=61.5
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc------hhHHHHhhcccCCCeEEEEeC-CCC---hhhhc---
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT------PGVTADISHMDTGAVVRGFLG-QPQ---LENAL--- 86 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~------~g~~~dL~~~~~~~~v~~~~~-t~d---l~~al--- 86 (369)
.++|.|+||+|++|+.++..|+.++. ++++++.... .....++... ...+..+.+ -+| +++++
T Consensus 6 ~~~ilItGasg~iG~~la~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~ 81 (249)
T PRK12827 6 SRRVLITGGSGGLGRAIAVRLAADGA--DVIVLDIHPMRGRAEADAVAAGIEAA--GGKALGLAFDVRDFAATRAALDAG 81 (249)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC--eEEEEcCcccccHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHH
Confidence 46999999999999999999999887 8899886431 1111122211 122322211 122 22222
Q ss_pred ----CCCcEEEEcCCCCCC-C--CCCH---HHHHHHHHHHHHHHHHHHh
Q 017551 87 ----TGMDLVIIPAGVPRK-P--GMTR---DDLFNINAGIVRTLCEGIA 125 (369)
Q Consensus 87 ----~~ADiVii~ag~p~k-~--g~~r---~~~~~~N~~i~~~i~~~i~ 125 (369)
...|+||..+|.... + ..+. ...+..|......+++.+.
T Consensus 82 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 130 (249)
T PRK12827 82 VEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAAL 130 (249)
T ss_pred HHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHH
Confidence 468999999986442 1 1222 3345677777777777665
No 262
>PRK07576 short chain dehydrogenase; Provisional
Probab=96.27 E-value=0.053 Score=50.96 Aligned_cols=117 Identities=17% Similarity=0.190 Sum_probs=66.4
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-C---CCChhhhc-------
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-G---QPQLENAL------- 86 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~---t~dl~~al------- 86 (369)
.++|.|+||+|++|+.++..|+..+. +|+++|.+.. .....++.... .++..+. . .+++.+++
T Consensus 9 ~k~ilItGasggIG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~i~~~~~~~~~~~ 84 (264)
T PRK07576 9 GKNVVVVGGTSGINLGIAQAFARAGA--NVAVASRSQEKVDAAVAQLQQAG--PEGLGVSADVRDYAAVEAAFAQIADEF 84 (264)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHhC--CceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 45899999999999999999998887 8999998752 22222333211 1222111 1 11222222
Q ss_pred CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHhhh--CCCeEEEEecCCC
Q 017551 87 TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKC--CPNATVNLISNPV 140 (369)
Q Consensus 87 ~~ADiVii~ag~p~k~---g~~r---~~~~~~N~~i~~~i~~~i~~~--~p~a~viv~tNPv 140 (369)
...|+||..+|..... ..+. ...+..|..-...+.+.+... .+++.++++|...
T Consensus 85 ~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~ 146 (264)
T PRK07576 85 GPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQ 146 (264)
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChh
Confidence 3579999988753211 1222 223456655555555444332 1346677776543
No 263
>PRK06197 short chain dehydrogenase; Provisional
Probab=96.27 E-value=0.075 Score=51.05 Aligned_cols=117 Identities=22% Similarity=0.155 Sum_probs=67.1
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch--hHHHHhhcccCCCeEEEEe-CCCCh---hhh-------
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFL-GQPQL---ENA------- 85 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~--g~~~dL~~~~~~~~v~~~~-~t~dl---~~a------- 85 (369)
+.++|.|+||+|+||..++..|+..+. +|++++.+... ....++........+..+. .-+|. .++
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~--~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 92 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGA--HVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAA 92 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhh
Confidence 456899999999999999999999887 89999987522 1222333211112233221 11222 111
Q ss_pred cCCCcEEEEcCCCCCCCC-C---CHHHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecC
Q 017551 86 LTGMDLVIIPAGVPRKPG-M---TRDDLFNINAGI----VRTLCEGIAKCCPNATVNLISN 138 (369)
Q Consensus 86 l~~ADiVii~ag~p~k~g-~---~r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tN 138 (369)
+...|+||..||....+. . .-...+..|... .+.+.+.+.+.. .+.|+++|.
T Consensus 93 ~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~iV~vSS 152 (306)
T PRK06197 93 YPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVP-GSRVVTVSS 152 (306)
T ss_pred CCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCC-CCEEEEECC
Confidence 236899999998632211 1 112334555444 566666665443 355666653
No 264
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=96.26 E-value=0.04 Score=53.42 Aligned_cols=114 Identities=13% Similarity=0.049 Sum_probs=65.1
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhhc-------
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENAL------- 86 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al------- 86 (369)
.++|.|+||+|+||..++..|+..+. +|++.+.+.. .....++... ...+..+. .-+| ..+++
T Consensus 6 ~k~vlVTGas~gIG~~~a~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 81 (322)
T PRK07453 6 KGTVIITGASSGVGLYAAKALAKRGW--HVIMACRNLKKAEAAAQELGIP--PDSYTIIHIDLGDLDSVRRFVDDFRALG 81 (322)
T ss_pred CCEEEEEcCCChHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHhhcc--CCceEEEEecCCCHHHHHHHHHHHHHhC
Confidence 45899999999999999999999886 8999998762 2222333211 12233221 1122 22222
Q ss_pred CCCcEEEEcCCCCCC----CCCCH---HHHHHHHHHH----HHHHHHHHhhhCC-CeEEEEec
Q 017551 87 TGMDLVIIPAGVPRK----PGMTR---DDLFNINAGI----VRTLCEGIAKCCP-NATVNLIS 137 (369)
Q Consensus 87 ~~ADiVii~ag~p~k----~g~~r---~~~~~~N~~i----~~~i~~~i~~~~p-~a~viv~t 137 (369)
...|+||..||.... ...+. ...+..|... .+.+.+.+.+... .+.|+++|
T Consensus 82 ~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vs 144 (322)
T PRK07453 82 KPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILG 144 (322)
T ss_pred CCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEc
Confidence 248999999986321 12232 3345666644 4444444544332 24566554
No 265
>PRK05867 short chain dehydrogenase; Provisional
Probab=96.26 E-value=0.072 Score=49.44 Aligned_cols=114 Identities=20% Similarity=0.216 Sum_probs=65.2
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCC---hhh-------hc
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LEN-------AL 86 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~-------al 86 (369)
.+.+.|+||+|++|..++..|+..|. +|++.|.+. ......++.+.. .++..+. .-+| ..+ .+
T Consensus 9 ~k~vlVtGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (253)
T PRK05867 9 GKRALITGASTGIGKRVALAYVEAGA--QVAIAARHLDALEKLADEIGTSG--GKVVPVCCDVSQHQQVTSMLDQVTAEL 84 (253)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHhcC--CeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 45899999999999999999999987 899999876 222233333221 2222221 1122 222 23
Q ss_pred CCCcEEEEcCCCCCC-C--CCCH---HHHHHHHHHHHHHHHH----HHhhhCCCeEEEEec
Q 017551 87 TGMDLVIIPAGVPRK-P--GMTR---DDLFNINAGIVRTLCE----GIAKCCPNATVNLIS 137 (369)
Q Consensus 87 ~~ADiVii~ag~p~k-~--g~~r---~~~~~~N~~i~~~i~~----~i~~~~p~a~viv~t 137 (369)
...|++|..+|.... + ..+. ...+..|+.-...+.+ .+.+....+.+++++
T Consensus 85 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~s 145 (253)
T PRK05867 85 GGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTA 145 (253)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEEC
Confidence 478999999886432 1 1222 2334566544444444 443333335565554
No 266
>PRK13243 glyoxylate reductase; Reviewed
Probab=96.26 E-value=0.023 Score=55.96 Aligned_cols=92 Identities=23% Similarity=0.278 Sum_probs=59.7
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV 98 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~ 98 (369)
..++|+|||. |.||+.++..+...+. +|..||........ ... . +. ..++.+.+++||+|++..
T Consensus 149 ~gktvgIiG~-G~IG~~vA~~l~~~G~--~V~~~d~~~~~~~~--~~~---~--~~----~~~l~ell~~aDiV~l~l-- 212 (333)
T PRK13243 149 YGKTIGIIGF-GRIGQAVARRAKGFGM--RILYYSRTRKPEAE--KEL---G--AE----YRPLEELLRESDFVSLHV-- 212 (333)
T ss_pred CCCEEEEECc-CHHHHHHHHHHHHCCC--EEEEECCCCChhhH--HHc---C--CE----ecCHHHHHhhCCEEEEeC--
Confidence 3579999999 9999999999987776 89999986422111 111 1 11 135778899999999984
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551 99 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 137 (369)
Q Consensus 99 p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 137 (369)
|..+. +-.++.+ +.+...-|++++|+++
T Consensus 213 P~t~~---------T~~~i~~--~~~~~mk~ga~lIN~a 240 (333)
T PRK13243 213 PLTKE---------TYHMINE--ERLKLMKPTAILVNTA 240 (333)
T ss_pred CCChH---------HhhccCH--HHHhcCCCCeEEEECc
Confidence 32211 1111211 2333334889999886
No 267
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=96.26 E-value=0.027 Score=53.99 Aligned_cols=120 Identities=22% Similarity=0.257 Sum_probs=79.2
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhC----CC-----CcEEEEEeCCC--chh------HHHHhhcccCCCeEEEEeCCCCh
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKIN----PL-----VSVLHLYDVVN--TPG------VTADISHMDTGAVVRGFLGQPQL 82 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~----~~-----~~el~L~D~~~--~~g------~~~dL~~~~~~~~v~~~~~t~dl 82 (369)
..||+|.|| |..|..++.+|... |+ -..++++|.+. ... ....+.+.. .. . ...+|
T Consensus 25 d~~iv~~GA-GsAg~gia~ll~~~~~~~G~~~eeA~~~i~~vD~~Gll~~~r~~l~~~~~~~a~~~--~~-~---~~~~L 97 (279)
T cd05312 25 DQRILFLGA-GSAGIGIADLIVSAMVREGLSEEEARKKIWLVDSKGLLTKDRKDLTPFKKPFARKD--EE-K---EGKSL 97 (279)
T ss_pred hcEEEEECc-CHHHHHHHHHHHHHHHHcCCChhhccCeEEEEcCCCeEeCCCCcchHHHHHHHhhc--Cc-c---cCCCH
Confidence 469999999 99999999877653 54 26899999986 111 111122211 11 1 13579
Q ss_pred hhhcC--CCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCC--ChhHHHHHHHHHhCCCC
Q 017551 83 ENALT--GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN--STVPIAAEVFKKAGTYD 158 (369)
Q Consensus 83 ~~al~--~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~--~~t~i~ae~~~~~~~~~ 158 (369)
.++++ ++|++|=+.+.| | -+-+++.+.|.++|++.+|+-.|||.. -.++ +-.++.+ +
T Consensus 98 ~e~i~~v~ptvlIG~S~~~---g-----------~ft~evv~~Ma~~~~~PIIFaLSNPt~~~E~~p---e~a~~~t--~ 158 (279)
T cd05312 98 LEVVKAVKPTVLIGLSGVG---G-----------AFTEEVVRAMAKSNERPIIFALSNPTSKAECTA---EDAYKWT--D 158 (279)
T ss_pred HHHHHhcCCCEEEEeCCCC---C-----------CCCHHHHHHHHhcCCCCEEEECCCcCCccccCH---HHHHHhh--c
Confidence 99999 999988765544 3 123578889999999999998999986 3443 2223432 1
Q ss_pred CCcEEEe
Q 017551 159 PKKLLGV 165 (369)
Q Consensus 159 ~~kviG~ 165 (369)
-+.+|+.
T Consensus 159 G~ai~AT 165 (279)
T cd05312 159 GRALFAS 165 (279)
T ss_pred CCEEEEe
Confidence 2458887
No 268
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.25 E-value=0.042 Score=50.41 Aligned_cols=116 Identities=18% Similarity=0.254 Sum_probs=66.1
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEeC-CC---Chhhhc-------
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLG-QP---QLENAL------- 86 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~~-t~---dl~~al------- 86 (369)
.+++.|+||+|++|..++..|+.++. +|++.+.+.. .....++... ..++..+.. -+ ++.+++
T Consensus 7 ~~~vlVtG~sg~iG~~l~~~L~~~G~--~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (239)
T PRK07666 7 GKNALITGAGRGIGRAVAIALAKEGV--NVGLLARTEENLKAVAEEVEAY--GVKVVIATADVSDYEEVTAAIEQLKNEL 82 (239)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHh--CCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 35899999999999999999998887 8999998752 2222333321 123333221 12 222333
Q ss_pred CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecCC
Q 017551 87 TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISNP 139 (369)
Q Consensus 87 ~~ADiVii~ag~p~k~---g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNP 139 (369)
.+.|+||..+|..... ..+. ...+..|..-...+.+.+..+ ...+.++++|..
T Consensus 83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~ 144 (239)
T PRK07666 83 GSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISST 144 (239)
T ss_pred CCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcch
Confidence 3799999998864321 1222 233455655444444444332 223445555543
No 269
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=96.24 E-value=0.024 Score=51.95 Aligned_cols=113 Identities=20% Similarity=0.329 Sum_probs=64.7
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhh-------hc
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LEN-------AL 86 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~-------al 86 (369)
.+++.|+||+|++|+.++..|+.++. .+++.+.+.. .....++. ..+..+. .-++ +++ .+
T Consensus 6 ~~~vlItGa~g~iG~~la~~l~~~g~--~v~~~~~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (245)
T PRK12936 6 GRKALVTGASGGIGEEIARLLHAQGA--IVGLHGTRVEKLEALAAELG-----ERVKIFPANLSDRDEVKALGQKAEADL 78 (245)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHhC-----CceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 46999999999999999999999887 7888887642 22222221 1222211 1122 211 13
Q ss_pred CCCcEEEEcCCCCCCC---C---CCHHHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecCC
Q 017551 87 TGMDLVIIPAGVPRKP---G---MTRDDLFNINAGIVRTLCEGIAKC---CPNATVNLISNP 139 (369)
Q Consensus 87 ~~ADiVii~ag~p~k~---g---~~r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNP 139 (369)
...|+||..+|..... . ......+..|+.....+++.+... .+.+.++++|..
T Consensus 79 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~ 140 (245)
T PRK12936 79 EGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSV 140 (245)
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCH
Confidence 4689999999864321 1 112334566666554454444322 244566666643
No 270
>PRK05479 ketol-acid reductoisomerase; Provisional
Probab=96.24 E-value=0.033 Score=54.83 Aligned_cols=66 Identities=20% Similarity=0.167 Sum_probs=46.7
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 96 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a 96 (369)
+.+||+|||. |.+|++++..|+..+. +++.++....... +..... .+.. .+..+++++||+|+++.
T Consensus 16 ~gktIgIIG~-GsmG~AlA~~L~~sG~--~Vvv~~r~~~~s~--~~A~~~---G~~~----~s~~eaa~~ADVVvLaV 81 (330)
T PRK05479 16 KGKKVAIIGY-GSQGHAHALNLRDSGV--DVVVGLREGSKSW--KKAEAD---GFEV----LTVAEAAKWADVIMILL 81 (330)
T ss_pred CCCEEEEEee-HHHHHHHHHHHHHCCC--EEEEEECCchhhH--HHHHHC---CCee----CCHHHHHhcCCEEEEcC
Confidence 4579999999 9999999999999887 8888876542111 111111 1111 25678999999999984
No 271
>PRK09186 flagellin modification protein A; Provisional
Probab=96.23 E-value=0.048 Score=50.45 Aligned_cols=36 Identities=25% Similarity=0.264 Sum_probs=32.0
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 56 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~ 56 (369)
+.++|.|+||+|++|..++..|...+. +|++.+.+.
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~--~v~~~~r~~ 38 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGG--IVIAADIDK 38 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEecCh
Confidence 346899999999999999999999887 899998875
No 272
>PRK15059 tartronate semialdehyde reductase; Provisional
Probab=96.23 E-value=0.018 Score=55.66 Aligned_cols=63 Identities=17% Similarity=0.338 Sum_probs=46.0
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 96 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a 96 (369)
|||+|||. |.+|++++..|...++ ++.++|++.. ..++... . ... ..+..++.++||+||++.
T Consensus 1 m~Ig~IGl-G~MG~~ma~~L~~~G~--~v~v~~~~~~---~~~~~~~--g--~~~---~~s~~~~~~~advVi~~v 63 (292)
T PRK15059 1 MKLGFIGL-GIMGTPMAINLARAGH--QLHVTTIGPV---ADELLSL--G--AVS---VETARQVTEASDIIFIMV 63 (292)
T ss_pred CeEEEEcc-CHHHHHHHHHHHHCCC--eEEEEeCCHh---HHHHHHc--C--Cee---cCCHHHHHhcCCEEEEeC
Confidence 58999999 9999999999999987 8899998752 1223221 1 111 134567789999999984
No 273
>PRK07478 short chain dehydrogenase; Provisional
Probab=96.21 E-value=0.094 Score=48.65 Aligned_cols=114 Identities=17% Similarity=0.170 Sum_probs=66.9
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCC---hhhh-------c
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENA-------L 86 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~a-------l 86 (369)
.+++.|+||+|++|..++..|+..|. +|++.+.+. ......++.+.. .++..+. .-++ .+++ +
T Consensus 6 ~k~~lItGas~giG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (254)
T PRK07478 6 GKVAIITGASSGIGRAAAKLFAREGA--KVVVGARRQAELDQLVAEIRAEG--GEAVALAGDVRDEAYAKALVALAVERF 81 (254)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 35899999999999999999999987 899999875 222333443321 2222221 1122 1222 2
Q ss_pred CCCcEEEEcCCCC--CCC--CCCH---HHHHHHHHH----HHHHHHHHHhhhCCCeEEEEecC
Q 017551 87 TGMDLVIIPAGVP--RKP--GMTR---DDLFNINAG----IVRTLCEGIAKCCPNATVNLISN 138 (369)
Q Consensus 87 ~~ADiVii~ag~p--~k~--g~~r---~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tN 138 (369)
...|++|..+|.. ..+ ..+. ...+..|.. ..+.+.+.+.+. ..+.++++|.
T Consensus 82 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~-~~~~iv~~sS 143 (254)
T PRK07478 82 GGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLAR-GGGSLIFTST 143 (254)
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCceEEEEec
Confidence 3689999999863 222 2222 334566664 444555555443 3345665553
No 274
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=96.19 E-value=0.021 Score=55.15 Aligned_cols=96 Identities=22% Similarity=0.257 Sum_probs=61.6
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV 98 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~ 98 (369)
...+|+|+|+ |.+|+.++..|...+. +|.++|.+.... ..+.... ..... ..++.+.++++|+||.+.
T Consensus 150 ~gk~v~IiG~-G~iG~avA~~L~~~G~--~V~v~~R~~~~~--~~~~~~g----~~~~~-~~~l~~~l~~aDiVint~-- 217 (287)
T TIGR02853 150 HGSNVMVLGF-GRTGMTIARTFSALGA--RVFVGARSSADL--ARITEMG----LIPFP-LNKLEEKVAEIDIVINTI-- 217 (287)
T ss_pred CCCEEEEEcC-hHHHHHHHHHHHHCCC--EEEEEeCCHHHH--HHHHHCC----Ceeec-HHHHHHHhccCCEEEECC--
Confidence 3569999999 9999999999998886 899999875221 1111111 11111 235678889999999985
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEe-cCCCCC
Q 017551 99 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI-SNPVNS 142 (369)
Q Consensus 99 p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~-tNPv~~ 142 (369)
|. + ++ + . +.++...|+++++.+ ++|-++
T Consensus 218 P~--~-----ii--~----~---~~l~~~k~~aliIDlas~Pg~t 246 (287)
T TIGR02853 218 PA--L-----VL--T----A---DVLSKLPKHAVIIDLASKPGGT 246 (287)
T ss_pred Ch--H-----Hh--C----H---HHHhcCCCCeEEEEeCcCCCCC
Confidence 31 0 11 1 1 123333467888876 688765
No 275
>PRK07574 formate dehydrogenase; Provisional
Probab=96.18 E-value=0.035 Score=55.80 Aligned_cols=94 Identities=19% Similarity=0.263 Sum_probs=60.3
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV 98 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~ 98 (369)
..++|+|||. |.||+.++..|+.-+. +|+.||....... .... ..+.. ..++++.++.||+|++..
T Consensus 191 ~gktVGIvG~-G~IG~~vA~~l~~fG~--~V~~~dr~~~~~~---~~~~---~g~~~---~~~l~ell~~aDvV~l~l-- 256 (385)
T PRK07574 191 EGMTVGIVGA-GRIGLAVLRRLKPFDV--KLHYTDRHRLPEE---VEQE---LGLTY---HVSFDSLVSVCDVVTIHC-- 256 (385)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC--EEEEECCCCCchh---hHhh---cCcee---cCCHHHHhhcCCEEEEcC--
Confidence 3579999999 9999999999987776 9999998652111 1110 01222 235789999999999984
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551 99 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 137 (369)
Q Consensus 99 p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 137 (369)
|..+ .+-.++. .+.+....|.+++|+++
T Consensus 257 Plt~---------~T~~li~--~~~l~~mk~ga~lIN~a 284 (385)
T PRK07574 257 PLHP---------ETEHLFD--ADVLSRMKRGSYLVNTA 284 (385)
T ss_pred CCCH---------HHHHHhC--HHHHhcCCCCcEEEECC
Confidence 3211 1112221 13333445788888886
No 276
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=96.18 E-value=0.071 Score=49.62 Aligned_cols=115 Identities=17% Similarity=0.249 Sum_probs=66.3
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEe-CCCC---hhhhc-------CC
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------TG 88 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al-------~~ 88 (369)
.+.+.|+||+|++|..++..|+..+. +|+++|.........++... ...+..+. .-+| ..+.+ ..
T Consensus 10 ~k~~lItG~~~gIG~a~a~~l~~~G~--~vv~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 85 (253)
T PRK08993 10 GKVAVVTGCDTGLGQGMALGLAEAGC--DIVGINIVEPTETIEQVTAL--GRRFLSLTADLRKIDGIPALLERAVAEFGH 85 (253)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--EEEEecCcchHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 45899999999999999999999887 88888876532222333221 11222221 1122 22222 36
Q ss_pred CcEEEEcCCCCCC-C--CCC---HHHHHHHHHHHHHHHH----HHHhhhCCCeEEEEecC
Q 017551 89 MDLVIIPAGVPRK-P--GMT---RDDLFNINAGIVRTLC----EGIAKCCPNATVNLISN 138 (369)
Q Consensus 89 ADiVii~ag~p~k-~--g~~---r~~~~~~N~~i~~~i~----~~i~~~~p~a~viv~tN 138 (369)
.|++|..+|.... + ..+ -...+..|......+. +.+.+..+.+.++++|.
T Consensus 86 ~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS 145 (253)
T PRK08993 86 IDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIAS 145 (253)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECc
Confidence 8999999987531 1 122 2344566655444444 44444344576776654
No 277
>PTZ00431 pyrroline carboxylate reductase; Provisional
Probab=96.18 E-value=0.024 Score=53.74 Aligned_cols=61 Identities=13% Similarity=0.213 Sum_probs=43.7
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCC--cEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLV--SVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 96 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~--~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a 96 (369)
.|||+|||+ |.+|+.++..|...+.. .+++.+|.+... + .+.. ..+..++++++|+||++.
T Consensus 3 ~mkI~iIG~-G~mG~ai~~~l~~~~~~~~~~i~~~~~~~~~-----~-------~~~~---~~~~~~~~~~~D~Vilav 65 (260)
T PTZ00431 3 NIRVGFIGL-GKMGSALAYGIENSNIIGKENIYYHTPSKKN-----T-------PFVY---LQSNEELAKTCDIIVLAV 65 (260)
T ss_pred CCEEEEECc-cHHHHHHHHHHHhCCCCCcceEEEECCChhc-----C-------CeEE---eCChHHHHHhCCEEEEEe
Confidence 479999999 99999999999887632 358888876421 0 1111 134456788999999983
No 278
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=96.18 E-value=0.078 Score=49.30 Aligned_cols=113 Identities=19% Similarity=0.207 Sum_probs=63.8
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc-hhHHHHhhcccCCCeEEEEe-CCCC---hhhh-------cC
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFL-GQPQ---LENA-------LT 87 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~-~g~~~dL~~~~~~~~v~~~~-~t~d---l~~a-------l~ 87 (369)
.+++.|+||+|++|+.++..|+..+. +|+++|.+.. .....++... ..++..+. .-+| ..++ +.
T Consensus 8 ~k~vlVtGas~gIG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (260)
T PRK12823 8 GKVVVVTGAAQGIGRGVALRAAAEGA--RVVLVDRSELVHEVAAELRAA--GGEALALTADLETYAGAQAAMAAAVEAFG 83 (260)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCchHHHHHHHHHHhc--CCeEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence 46899999999999999999999987 8999998752 2222223221 11222111 1122 1222 24
Q ss_pred CCcEEEEcCCCCC--CC--CCCH---HHHHHHHHH----HHHHHHHHHhhhCCCeEEEEec
Q 017551 88 GMDLVIIPAGVPR--KP--GMTR---DDLFNINAG----IVRTLCEGIAKCCPNATVNLIS 137 (369)
Q Consensus 88 ~ADiVii~ag~p~--k~--g~~r---~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~t 137 (369)
+.|++|..||... .+ ..+. ...+..|+- +.+.+.+.+.+.. .+.|+++|
T Consensus 84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~s 143 (260)
T PRK12823 84 RIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQG-GGAIVNVS 143 (260)
T ss_pred CCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEEc
Confidence 6899999988532 22 1222 222344443 4455555555443 34566554
No 279
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=96.18 E-value=0.062 Score=49.49 Aligned_cols=115 Identities=13% Similarity=0.205 Sum_probs=65.6
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC---chhHHHHhhcccCCCeEEEEe-CCCC---hhhhc------
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL------ 86 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~---~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al------ 86 (369)
.+.+.|+||+|++|+.++..|+..+. ++++.+... ......++.+.. .++..+. ..+| +.+++
T Consensus 6 ~~~~lItG~s~~iG~~la~~l~~~g~--~v~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (247)
T PRK12935 6 GKVAIVTGGAKGIGKAITVALAQEGA--KVVINYNSSKEAAENLVNELGKEG--HDVYAVQADVSKVEDANRLVEEAVNH 81 (247)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCC--EEEEEcCCcHHHHHHHHHHHHhcC--CeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 45899999999999999999998886 776655432 222223343221 2333221 1122 22223
Q ss_pred -CCCcEEEEcCCCCCCCC------CCHHHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecC
Q 017551 87 -TGMDLVIIPAGVPRKPG------MTRDDLFNINAGIVRTLCEGIAKC---CPNATVNLISN 138 (369)
Q Consensus 87 -~~ADiVii~ag~p~k~g------~~r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN 138 (369)
...|+||..+|...... ..-.+.+..|..-...+.+.+..+ ...+.++++|.
T Consensus 82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS 143 (247)
T PRK12935 82 FGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISS 143 (247)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcc
Confidence 34799999988743221 112345667766666666655543 23445666554
No 280
>PRK06476 pyrroline-5-carboxylate reductase; Reviewed
Probab=96.17 E-value=0.027 Score=53.17 Aligned_cols=68 Identities=18% Similarity=0.238 Sum_probs=46.0
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCC-CcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPL-VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 96 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~-~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a 96 (369)
|||+|||+ |.+|+.++..|...+. ...+.++|.+... ...+.... ..++. .++..+++++||+||++.
T Consensus 1 m~IgiIG~-G~mG~aia~~L~~~g~~~~~i~v~~r~~~~--~~~l~~~~--~~~~~---~~~~~~~~~~aDvVilav 69 (258)
T PRK06476 1 MKIGFIGT-GAITEAMVTGLLTSPADVSEIIVSPRNAQI--AARLAERF--PKVRI---AKDNQAVVDRSDVVFLAV 69 (258)
T ss_pred CeEEEECc-CHHHHHHHHHHHhCCCChheEEEECCCHHH--HHHHHHHc--CCceE---eCCHHHHHHhCCEEEEEe
Confidence 58999999 9999999999988764 4467788876422 22222211 11222 235567789999999985
No 281
>PRK08263 short chain dehydrogenase; Provisional
Probab=96.17 E-value=0.026 Score=53.24 Aligned_cols=111 Identities=15% Similarity=0.030 Sum_probs=62.5
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEe-CCCC---hhhh-------cCCC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQ---LENA-------LTGM 89 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~a-------l~~A 89 (369)
+.|.|+||+|++|+.++..|+.++. +|++.|.+.... .++.+.. ...+..+. .-+| +.+. +...
T Consensus 4 k~vlItGasg~iG~~~a~~l~~~g~--~V~~~~r~~~~~--~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 78 (275)
T PRK08263 4 KVWFITGASRGFGRAWTEAALERGD--RVVATARDTATL--ADLAEKY-GDRLLPLALDVTDRAAVFAAVETAVEHFGRL 78 (275)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCC--EEEEEECCHHHH--HHHHHhc-cCCeeEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4799999999999999999998887 899999875211 1111111 11111111 1122 2122 2467
Q ss_pred cEEEEcCCCCCCC---CCC---HHHHHHHHHHH----HHHHHHHHhhhCCCeEEEEec
Q 017551 90 DLVIIPAGVPRKP---GMT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLIS 137 (369)
Q Consensus 90 DiVii~ag~p~k~---g~~---r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~t 137 (369)
|.||..+|..... ..+ -...+..|+.- .+.+.+.+++.... .++++|
T Consensus 79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-~iv~vs 135 (275)
T PRK08263 79 DIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSG-HIIQIS 135 (275)
T ss_pred CEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC-EEEEEc
Confidence 9999999875321 112 23345566554 44555555554444 455554
No 282
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=96.17 E-value=0.014 Score=55.69 Aligned_cols=93 Identities=13% Similarity=0.148 Sum_probs=60.4
Q ss_pred EEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcC--CCcEEEEcCCCCCC-
Q 017551 25 ILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALT--GMDLVIIPAGVPRK- 101 (369)
Q Consensus 25 IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~--~ADiVii~ag~p~k- 101 (369)
|+||+|++|++++..|...+. ++++..... ..|+.+ ..++.+.++ ++|+||.+|+....
T Consensus 2 ItGa~GfiG~~l~~~L~~~g~--~v~~~~~~~----~~Dl~~------------~~~l~~~~~~~~~d~Vih~A~~~~~~ 63 (306)
T PLN02725 2 VAGHRGLVGSAIVRKLEALGF--TNLVLRTHK----ELDLTR------------QADVEAFFAKEKPTYVILAAAKVGGI 63 (306)
T ss_pred cccCCCcccHHHHHHHHhCCC--cEEEeeccc----cCCCCC------------HHHHHHHHhccCCCEEEEeeeeeccc
Confidence 899999999999999988775 444443211 112221 123444444 57999999876321
Q ss_pred --CCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEe
Q 017551 102 --PGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI 136 (369)
Q Consensus 102 --~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~ 136 (369)
......++...|......+++.+++....- +|++
T Consensus 64 ~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~-~i~~ 99 (306)
T PLN02725 64 HANMTYPADFIRENLQIQTNVIDAAYRHGVKK-LLFL 99 (306)
T ss_pred chhhhCcHHHHHHHhHHHHHHHHHHHHcCCCe-EEEe
Confidence 122345677889999999999999875443 3434
No 283
>PRK06138 short chain dehydrogenase; Provisional
Probab=96.16 E-value=0.1 Score=48.07 Aligned_cols=75 Identities=23% Similarity=0.250 Sum_probs=48.7
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhhc-------
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENAL------- 86 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al------- 86 (369)
.+++.|+||+|++|+.++..|+..+. +|++++.+.. .....++. ....+..+. .-+| +.+++
T Consensus 5 ~k~~lItG~sg~iG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~i~~~~ 79 (252)
T PRK06138 5 GRVAIVTGAGSGIGRATAKLFAREGA--RVVVADRDAEAAERVAAAIA---AGGRAFARQGDVGSAEAVEALVDFVAARW 79 (252)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCC--eEEEecCCHHHHHHHHHHHh---cCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 45899999999999999999999887 8999998752 22222222 112233221 1122 22222
Q ss_pred CCCcEEEEcCCCC
Q 017551 87 TGMDLVIIPAGVP 99 (369)
Q Consensus 87 ~~ADiVii~ag~p 99 (369)
.+.|+||..+|..
T Consensus 80 ~~id~vi~~ag~~ 92 (252)
T PRK06138 80 GRLDVLVNNAGFG 92 (252)
T ss_pred CCCCEEEECCCCC
Confidence 3789999998864
No 284
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=96.16 E-value=0.024 Score=50.12 Aligned_cols=58 Identities=26% Similarity=0.436 Sum_probs=42.4
Q ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551 18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 97 (369)
Q Consensus 18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag 97 (369)
-+.++|+|||.|..+|.+++.+|..++. .+.+.+.+ |.++++.++.||+||.++|
T Consensus 34 l~Gk~v~VvGrs~~VG~Pla~lL~~~~a--tVt~~h~~-----------------------T~~l~~~~~~ADIVVsa~G 88 (160)
T PF02882_consen 34 LEGKKVVVVGRSNIVGKPLAMLLLNKGA--TVTICHSK-----------------------TKNLQEITRRADIVVSAVG 88 (160)
T ss_dssp TTT-EEEEE-TTTTTHHHHHHHHHHTT---EEEEE-TT-----------------------SSSHHHHHTTSSEEEE-SS
T ss_pred CCCCEEEEECCcCCCChHHHHHHHhCCC--eEEeccCC-----------------------CCcccceeeeccEEeeeec
Confidence 4567999999988999999999998865 55554432 3567788999999999998
Q ss_pred CCC
Q 017551 98 VPR 100 (369)
Q Consensus 98 ~p~ 100 (369)
.|.
T Consensus 89 ~~~ 91 (160)
T PF02882_consen 89 KPN 91 (160)
T ss_dssp STT
T ss_pred ccc
Confidence 773
No 285
>PRK07856 short chain dehydrogenase; Provisional
Probab=96.16 E-value=0.042 Score=50.97 Aligned_cols=109 Identities=13% Similarity=0.137 Sum_probs=64.3
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEe-C---CCChhhhc-------CC
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-G---QPQLENAL-------TG 88 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~-~---t~dl~~al-------~~ 88 (369)
.+++.|+||+|++|+.++..|+..+. +|+++|.+... ... ...+..+. . ..++++.+ ..
T Consensus 6 ~k~~lItGas~gIG~~la~~l~~~g~--~v~~~~r~~~~----~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 75 (252)
T PRK07856 6 GRVVLVTGGTRGIGAGIARAFLAAGA--TVVVCGRRAPE----TVD----GRPAEFHAADVRDPDQVAALVDAIVERHGR 75 (252)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCChhh----hhc----CCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 46899999999999999999999887 89999987522 011 11122111 1 11223333 34
Q ss_pred CcEEEEcCCCCC-CCC--CC---HHHHHHHHHHHHHHHHHHHhh----hCCCeEEEEecC
Q 017551 89 MDLVIIPAGVPR-KPG--MT---RDDLFNINAGIVRTLCEGIAK----CCPNATVNLISN 138 (369)
Q Consensus 89 ADiVii~ag~p~-k~g--~~---r~~~~~~N~~i~~~i~~~i~~----~~p~a~viv~tN 138 (369)
.|+||..+|... .+. .+ ....+..|+.-...+.+.+.. ....+.++++|.
T Consensus 76 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS 135 (252)
T PRK07856 76 LDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGS 135 (252)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcc
Confidence 599999988632 221 11 234456666655555555443 223356666654
No 286
>PRK07904 short chain dehydrogenase; Provisional
Probab=96.15 E-value=0.086 Score=49.33 Aligned_cols=115 Identities=14% Similarity=0.128 Sum_probs=65.4
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCC-CCcEEEEEeCCCc---hhHHHHhhcccCCCeEEEEe----CCCChhhhc----
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINP-LVSVLHLYDVVNT---PGVTADISHMDTGAVVRGFL----GQPQLENAL---- 86 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~-~~~el~L~D~~~~---~g~~~dL~~~~~~~~v~~~~----~t~dl~~al---- 86 (369)
+.++|.|+||+|++|..++..++.++ . .|++.+.+.. .....++.... ..++.... ...+.++.+
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~gg~--~V~~~~r~~~~~~~~~~~~l~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~ 83 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNAPA--RVVLAALPDDPRRDAAVAQMKAAG-ASSVEVIDFDALDTDSHPKVIDAAF 83 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcCCC--eEEEEeCCcchhHHHHHHHHHhcC-CCceEEEEecCCChHHHHHHHHHHH
Confidence 34589999999999999999998874 6 8999998752 22333443321 11232221 111211112
Q ss_pred --CCCcEEEEcCCCCCCCCC---CH---HHHHHHHHH----HHHHHHHHHhhhCCCeEEEEec
Q 017551 87 --TGMDLVIIPAGVPRKPGM---TR---DDLFNINAG----IVRTLCEGIAKCCPNATVNLIS 137 (369)
Q Consensus 87 --~~ADiVii~ag~p~k~g~---~r---~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~t 137 (369)
.+.|++|..+|....... +. .+.+..|.. +.+.+.+.+.+... +.++++|
T Consensus 84 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~-~~iv~is 145 (253)
T PRK07904 84 AGGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGF-GQIIAMS 145 (253)
T ss_pred hcCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCC-ceEEEEe
Confidence 379999998887532211 11 123566654 33456666665543 4455554
No 287
>PRK12746 short chain dehydrogenase; Provisional
Probab=96.14 E-value=0.093 Score=48.52 Aligned_cols=114 Identities=18% Similarity=0.200 Sum_probs=63.3
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEe-CCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhhcC-----
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYD-VVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENALT----- 87 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D-~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al~----- 87 (369)
.++|.|+||+|++|+.++..|+.++. ++.+.+ .+.. .....++... ...+..+. .-+| +.++++
T Consensus 6 ~~~ilItGasg~iG~~la~~l~~~G~--~v~i~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~i~~~~~~~~~~ 81 (254)
T PRK12746 6 GKVALVTGASRGIGRAIAMRLANDGA--LVAIHYGRNKQAADETIREIESN--GGKAFLIEADLNSIDGVKKLVEQLKNE 81 (254)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhc--CCcEEEEEcCcCCHHHHHHHHHHHHHH
Confidence 36899999999999999999998886 776654 3331 1222223211 11222221 1122 222222
Q ss_pred --------CCcEEEEcCCCCCCCC---CCH---HHHHHHHHHHHHHHHHHHhhhC-CCeEEEEec
Q 017551 88 --------GMDLVIIPAGVPRKPG---MTR---DDLFNINAGIVRTLCEGIAKCC-PNATVNLIS 137 (369)
Q Consensus 88 --------~ADiVii~ag~p~k~g---~~r---~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~t 137 (369)
+.|+||.++|...... .+. ...+..|+.....+.+.+.++. ..+.++++|
T Consensus 82 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~s 146 (254)
T PRK12746 82 LQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINIS 146 (254)
T ss_pred hccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEEC
Confidence 6899999998643211 121 3344567766666666665543 223455554
No 288
>PRK09242 tropinone reductase; Provisional
Probab=96.14 E-value=0.095 Score=48.70 Aligned_cols=117 Identities=17% Similarity=0.164 Sum_probs=66.3
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCC----------hhhh
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ----------LENA 85 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~d----------l~~a 85 (369)
+.+++.|+||+|++|..++..|...+. +|++.+.+. ......++.......++.... .-++ ..+.
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~--~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 85 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGA--DVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDH 85 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 346899999999999999999999887 899999876 223333443321112232221 1111 1223
Q ss_pred cCCCcEEEEcCCCCC-CC--CCCH---HHHHHHHHHHHHHH----HHHHhhhCCCeEEEEecC
Q 017551 86 LTGMDLVIIPAGVPR-KP--GMTR---DDLFNINAGIVRTL----CEGIAKCCPNATVNLISN 138 (369)
Q Consensus 86 l~~ADiVii~ag~p~-k~--g~~r---~~~~~~N~~i~~~i----~~~i~~~~p~a~viv~tN 138 (369)
+...|+||..+|... .+ ..+. ...+..|+.-...+ .+.+.+. +.+.++++|-
T Consensus 86 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~ii~~sS 147 (257)
T PRK09242 86 WDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQH-ASSAIVNIGS 147 (257)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCceEEEECc
Confidence 456899999998632 11 1222 22345555544444 4444433 3455666553
No 289
>PRK05993 short chain dehydrogenase; Provisional
Probab=96.14 E-value=0.025 Score=53.56 Aligned_cols=112 Identities=12% Similarity=0.027 Sum_probs=64.0
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEE-eCCCChhhhc--------CCCcE
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGF-LGQPQLENAL--------TGMDL 91 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~-~~t~dl~~al--------~~ADi 91 (369)
++|.|+||+|++|..++..|+..+. +|++.+.+.... .++..... ..+... +...++++++ ...|+
T Consensus 5 k~vlItGasggiG~~la~~l~~~G~--~Vi~~~r~~~~~--~~l~~~~~-~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~ 79 (277)
T PRK05993 5 RSILITGCSSGIGAYCARALQSDGW--RVFATCRKEEDV--AALEAEGL-EAFQLDYAEPESIAALVAQVLELSGGRLDA 79 (277)
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHHHH--HHHHHCCc-eEEEccCCCHHHHHHHHHHHHHHcCCCccE
Confidence 4799999999999999999999887 899999875211 11221110 111111 0011122222 24699
Q ss_pred EEEcCCCCCCC---CCC---HHHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecC
Q 017551 92 VIIPAGVPRKP---GMT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISN 138 (369)
Q Consensus 92 Vii~ag~p~k~---g~~---r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tN 138 (369)
||..||..... ..+ ....+..|+.. .+.+.+.+.+.. .+.|+++|-
T Consensus 80 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~-~g~iv~isS 135 (277)
T PRK05993 80 LFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQG-QGRIVQCSS 135 (277)
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcC-CCEEEEECC
Confidence 99998864321 122 23345666554 556666665543 345666653
No 290
>PRK06701 short chain dehydrogenase; Provisional
Probab=96.14 E-value=0.051 Score=52.07 Aligned_cols=116 Identities=14% Similarity=0.151 Sum_probs=70.6
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc---hhHHHHhhcccCCCeEEEEe-CCCC---hhhhc-----
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMDTGAVVRGFL-GQPQ---LENAL----- 86 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~---~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al----- 86 (369)
+.++|.|+||+|++|..++..|+..+. +|++++.+.. ......+... ..++..+. .-+| +.+.+
T Consensus 45 ~~k~iLItGasggIG~~la~~l~~~G~--~V~l~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~i~~ 120 (290)
T PRK06701 45 KGKVALITGGDSGIGRAVAVLFAKEGA--DIAIVYLDEHEDANETKQRVEKE--GVKCLLIPGDVSDEAFCKDAVEETVR 120 (290)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 346899999999999999999999887 8999998752 2222222211 12332221 1122 22222
Q ss_pred --CCCcEEEEcCCCCCC--C--CCCH---HHHHHHHHHHHHHHHHHHhhh-CCCeEEEEecC
Q 017551 87 --TGMDLVIIPAGVPRK--P--GMTR---DDLFNINAGIVRTLCEGIAKC-CPNATVNLISN 138 (369)
Q Consensus 87 --~~ADiVii~ag~p~k--~--g~~r---~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tN 138 (369)
...|+||..+|.... + ..+. ...+..|+.....+.+.+..+ .+.+.++++|.
T Consensus 121 ~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS 182 (290)
T PRK06701 121 ELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGS 182 (290)
T ss_pred HcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEec
Confidence 357999999886321 1 1222 345677877777777777654 34556666654
No 291
>TIGR00873 gnd 6-phosphogluconate dehydrogenase, decarboxylating. This model does not specify whether the cofactor is NADP only (EC 1.1.1.44), NAD only, or both. The model does not assign an EC number for that reason.
Probab=96.14 E-value=0.019 Score=59.24 Aligned_cols=97 Identities=14% Similarity=0.204 Sum_probs=59.0
Q ss_pred EEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcc-cCCCeEEEEeCCCChhhhcCCCcEEEEcCCCCC
Q 017551 22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHM-DTGAVVRGFLGQPQLENALTGMDLVIIPAGVPR 100 (369)
Q Consensus 22 KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~-~~~~~v~~~~~t~dl~~al~~ADiVii~ag~p~ 100 (369)
+|+|||. |.+|++++..|+.++. +|++||.+..+ +.++... .....+.......++.++++++|+|++..
T Consensus 1 ~IG~IGL-G~MG~~mA~nL~~~G~--~V~v~drt~~~--~~~l~~~~~~g~~~~~~~s~~e~v~~l~~~dvIil~v---- 71 (467)
T TIGR00873 1 DIGVIGL-AVMGSNLALNMADHGF--TVSVYNRTPEK--TDEFLAEHAKGKKIVGAYSIEEFVQSLERPRKIMLMV---- 71 (467)
T ss_pred CEEEEee-HHHHHHHHHHHHhcCC--eEEEEeCCHHH--HHHHHhhccCCCCceecCCHHHHHhhcCCCCEEEEEC----
Confidence 4899999 9999999999999998 99999997632 2223221 00111222211223334557899888874
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhhh-CCCeEEEEecC
Q 017551 101 KPGMTRDDLFNINAGIVRTLCEGIAKC-CPNATVNLISN 138 (369)
Q Consensus 101 k~g~~r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tN 138 (369)
++| +.+.++...+..+ .++.++|..||
T Consensus 72 ~~~-----------~~v~~Vi~~l~~~L~~g~iIID~gn 99 (467)
T TIGR00873 72 KAG-----------APVDAVINQLLPLLEKGDIIIDGGN 99 (467)
T ss_pred CCc-----------HHHHHHHHHHHhhCCCCCEEEECCC
Confidence 112 2233344445444 36777888876
No 292
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=96.13 E-value=0.019 Score=53.71 Aligned_cols=36 Identities=19% Similarity=0.277 Sum_probs=32.2
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 56 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~ 56 (369)
+.+++.|+||+|++|+.++..|+..+. +|++.|.+.
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~--~V~~~~r~~ 39 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGA--RVAVLDKSA 39 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCH
Confidence 346999999999999999999999987 899999875
No 293
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.13 E-value=0.049 Score=49.71 Aligned_cols=101 Identities=19% Similarity=0.304 Sum_probs=57.1
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc---hhHHHHhhcccCCCeEEEEeC-CCC---hhhh-------
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMDTGAVVRGFLG-QPQ---LENA------- 85 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~---~g~~~dL~~~~~~~~v~~~~~-t~d---l~~a------- 85 (369)
.++|.|+||+|++|+.++..|.+++. ++.+...... .....++... ..++..+.. -+| +.++
T Consensus 6 ~~~vlItGasg~iG~~l~~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~ 81 (249)
T PRK12825 6 GRVALVTGAARGLGRAIALRLARAGA--DVVVHYRSDEEAAEELVEAVEAL--GRRAQAVQADVTDKAALEAAVAAAVER 81 (249)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--eEEEEeCCCHHHHHHHHHHHHhc--CCceEEEECCcCCHHHHHHHHHHHHHH
Confidence 45899999999999999999999987 6666554431 1122222221 123332211 112 2222
Q ss_pred cCCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHH
Q 017551 86 LTGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGI 124 (369)
Q Consensus 86 l~~ADiVii~ag~p~k~---g~~r---~~~~~~N~~i~~~i~~~i 124 (369)
+.+.|+||.++|..... .++. ...+..|+.....+.+.+
T Consensus 82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~ 126 (249)
T PRK12825 82 FGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAV 126 (249)
T ss_pred cCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHH
Confidence 24679999998853221 2222 334556666555555554
No 294
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=96.13 E-value=0.091 Score=48.39 Aligned_cols=113 Identities=17% Similarity=0.204 Sum_probs=64.1
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC----------hhhhcC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ----------LENALT 87 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d----------l~~al~ 87 (369)
++|.|+||+|++|+.++..|..++. +|++++.+.. .....++... ..++.... .-+| ..+.+.
T Consensus 2 ~~vlItGa~g~lG~~l~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 77 (255)
T TIGR01963 2 KTALVTGAASGIGLAIALALAAAGA--NVVVNDLGEAGAEAAAKVATDA--GGSVIYLVADVTKEDEIADMIAAAAAEFG 77 (255)
T ss_pred CEEEEcCCcchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 4799999999999999999998887 8999998762 1122222221 12233221 1122 223356
Q ss_pred CCcEEEEcCCCCCC-CC--CCH---HHHHHHHHHHHHHHHHHH----hhhCCCeEEEEecC
Q 017551 88 GMDLVIIPAGVPRK-PG--MTR---DDLFNINAGIVRTLCEGI----AKCCPNATVNLISN 138 (369)
Q Consensus 88 ~ADiVii~ag~p~k-~g--~~r---~~~~~~N~~i~~~i~~~i----~~~~p~a~viv~tN 138 (369)
+.|+||..+|.... +. .+. ...+..|..-...+.+.+ ++.. ...++++|.
T Consensus 78 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~~v~~ss 137 (255)
T TIGR01963 78 GLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQG-WGRIINIAS 137 (255)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEEcc
Confidence 78999999886321 11 111 233445655544444444 4333 334555553
No 295
>PRK07074 short chain dehydrogenase; Provisional
Probab=96.12 E-value=0.062 Score=49.87 Aligned_cols=112 Identities=21% Similarity=0.205 Sum_probs=62.7
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhhcC-------
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENALT------- 87 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al~------- 87 (369)
+++.|+||+|++|..++..|+..+. +|+++|.+.. .....++.+ ..+..+. .-+| +..++.
T Consensus 3 k~ilItGat~~iG~~la~~L~~~g~--~v~~~~r~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 76 (257)
T PRK07074 3 RTALVTGAAGGIGQALARRFLAAGD--RVLALDIDAAALAAFADALGD----ARFVPVACDLTDAASLAAALANAAAERG 76 (257)
T ss_pred CEEEEECCcchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhcC----CceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 4799999999999999999998886 8999998752 222223321 1222211 1122 222332
Q ss_pred CCcEEEEcCCCCCCCC---CCHH---HHHHHHHHHHHHHHHHHhhh---CCCeEEEEecC
Q 017551 88 GMDLVIIPAGVPRKPG---MTRD---DLFNINAGIVRTLCEGIAKC---CPNATVNLISN 138 (369)
Q Consensus 88 ~ADiVii~ag~p~k~g---~~r~---~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN 138 (369)
+.|+||..+|...... .+.. ..+..|......+.+.+... ...+.++++|.
T Consensus 77 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS 136 (257)
T PRK07074 77 PVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGS 136 (257)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcc
Confidence 5899999988633211 1222 22345555444444444322 23455666654
No 296
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=96.11 E-value=0.054 Score=49.56 Aligned_cols=71 Identities=20% Similarity=0.280 Sum_probs=45.3
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEe-CCCC------hhhhcCCCcEEE
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQ------LENALTGMDLVI 93 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~-~t~d------l~~al~~ADiVi 93 (369)
|+|.|+||+|+||..++..|+.++....+++.+.+.... +. ..++..+. .-+| +.+.+...|+||
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~----~~----~~~~~~~~~Dls~~~~~~~~~~~~~~id~li 72 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD----FQ----HDNVQWHALDVTDEAEIKQLSEQFTQLDWLI 72 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc----cc----cCceEEEEecCCCHHHHHHHHHhcCCCCEEE
Confidence 589999999999999999998876433677766654211 11 11222111 1111 223457899999
Q ss_pred EcCCCC
Q 017551 94 IPAGVP 99 (369)
Q Consensus 94 i~ag~p 99 (369)
..+|..
T Consensus 73 ~~aG~~ 78 (235)
T PRK09009 73 NCVGML 78 (235)
T ss_pred ECCccc
Confidence 999875
No 297
>PRK06198 short chain dehydrogenase; Provisional
Probab=96.10 E-value=0.13 Score=47.79 Aligned_cols=115 Identities=15% Similarity=0.193 Sum_probs=64.7
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcE-EEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCCh---hhh-------
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSV-LHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQL---ENA------- 85 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~e-l~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~dl---~~a------- 85 (369)
.++|.|+||+|++|+.++..|...+. + |+++|.+.. .....++... ...+..+. .-++. .+.
T Consensus 6 ~k~vlItGa~g~iG~~la~~l~~~G~--~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (260)
T PRK06198 6 GKVALVTGGTQGLGAAIARAFAERGA--AGLVICGRNAEKGEAQAAELEAL--GAKAVFVQADLSDVEDCRRVVAAADEA 81 (260)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCC--CeEEEEcCCHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 46899999999999999999998886 6 999998752 2222233221 12332211 11222 222
Q ss_pred cCCCcEEEEcCCCCCCC---CCCHH---HHHHHHHHHHHHH----HHHHhhhCCCeEEEEecC
Q 017551 86 LTGMDLVIIPAGVPRKP---GMTRD---DLFNINAGIVRTL----CEGIAKCCPNATVNLISN 138 (369)
Q Consensus 86 l~~ADiVii~ag~p~k~---g~~r~---~~~~~N~~i~~~i----~~~i~~~~p~a~viv~tN 138 (369)
+.+.|+||..+|.+... ..+.. ..+..|+.-...+ .+.+.+....+.++++|.
T Consensus 82 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss 144 (260)
T PRK06198 82 FGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGS 144 (260)
T ss_pred hCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECC
Confidence 23689999999875422 12222 2345565444444 444444333455666553
No 298
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=96.10 E-value=0.079 Score=57.19 Aligned_cols=116 Identities=21% Similarity=0.249 Sum_probs=65.1
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCC---hhhhcC------
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENALT------ 87 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al~------ 87 (369)
.++|.|+||+|++|..++..|++.|. +|++.|.+. ......++........+..+. .-+| ..++++
T Consensus 414 gkvvLVTGasggIG~aiA~~La~~Ga--~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~ 491 (676)
T TIGR02632 414 RRVAFVTGGAGGIGRETARRLAAEGA--HVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAY 491 (676)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHhCCC--EEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence 46899999999999999999999887 999999976 222223332111011122111 1122 223333
Q ss_pred -CCcEEEEcCCCCCC-C--CCCH---HHHHHHHHH----HHHHHHHHHhhhCCCeEEEEec
Q 017551 88 -GMDLVIIPAGVPRK-P--GMTR---DDLFNINAG----IVRTLCEGIAKCCPNATVNLIS 137 (369)
Q Consensus 88 -~ADiVii~ag~p~k-~--g~~r---~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~t 137 (369)
+.|+||..||.... + ..+. ...+..|+. +.+...+.+.+....+.++++|
T Consensus 492 g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iS 552 (676)
T TIGR02632 492 GGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIA 552 (676)
T ss_pred CCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 68999999987432 1 1121 122233332 3445556665544444455554
No 299
>cd00762 NAD_bind_malic_enz NAD(P) binding domain of malic enzyme. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glut
Probab=96.09 E-value=0.011 Score=55.78 Aligned_cols=123 Identities=18% Similarity=0.172 Sum_probs=80.3
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCC----C-----CcEEEEEeCCC--chhHHHHhhc--cc---CCCeEEEEeCCCChh
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINP----L-----VSVLHLYDVVN--TPGVTADISH--MD---TGAVVRGFLGQPQLE 83 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~----~-----~~el~L~D~~~--~~g~~~dL~~--~~---~~~~v~~~~~t~dl~ 83 (369)
..||+|.|| |..|..++.+|.... + .++++++|... ..+. .||.+ .. + .+-. ....+|.
T Consensus 25 d~riv~~GA-GsAg~gia~ll~~~~~~~Gls~e~A~~~i~~vD~~Gll~~~r-~~l~~~~~~~~~~-~~~~--~~~~~L~ 99 (254)
T cd00762 25 EHKVLFNGA-GAAALGIANLIVXLXVKEGISKEEACKRIWXVDRKGLLVKNR-KETCPNEYHLARF-ANPE--RESGDLE 99 (254)
T ss_pred hcEEEEECc-CHHHHHHHHHHHHHHHhcCCCHHHHhccEEEECCCCeEeCCC-CccCHHHHHHHHH-cCcc--cccCCHH
Confidence 469999999 999999998776533 2 24899999876 1111 01111 00 1 0101 1135799
Q ss_pred hhcC--CCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCC--ChhHHHHHHHHHhCCCCC
Q 017551 84 NALT--GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN--STVPIAAEVFKKAGTYDP 159 (369)
Q Consensus 84 ~al~--~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~--~~t~i~ae~~~~~~~~~~ 159 (369)
++++ ++|++|=+.+.| | -+-+++.+.|.++|++.+|+=.|||.. -.++ |-.++.+ +-
T Consensus 100 eav~~~kptvlIG~S~~~---g-----------~ft~evv~~Ma~~~~~PIIFaLSNPt~~aE~tp---e~a~~~t--~G 160 (254)
T cd00762 100 DAVEAAKPDFLIGVSRVG---G-----------AFTPEVIRAXAEINERPVIFALSNPTSKAECTA---EEAYTAT--EG 160 (254)
T ss_pred HHHHhhCCCEEEEeCCCC---C-----------CCCHHHHHHHhhcCCCCEEEECCCcCCccccCH---HHHHhhc--CC
Confidence 9999 999998876555 3 224578889999999999988899986 4443 3334443 23
Q ss_pred CcEEEec
Q 017551 160 KKLLGVT 166 (369)
Q Consensus 160 ~kviG~t 166 (369)
+.+|+..
T Consensus 161 ~ai~AtG 167 (254)
T cd00762 161 RAIFASG 167 (254)
T ss_pred CEEEEEC
Confidence 5788873
No 300
>PRK06196 oxidoreductase; Provisional
Probab=96.08 E-value=0.061 Score=52.00 Aligned_cols=113 Identities=19% Similarity=0.151 Sum_probs=65.0
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch--hHHHHhhcccCCCeEEEE-eCCCChhh-------hcCCC
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGF-LGQPQLEN-------ALTGM 89 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~--g~~~dL~~~~~~~~v~~~-~~t~dl~~-------al~~A 89 (369)
.++|.|+||+|++|..++..|+..+. +|++.+.+... ....++.... -+... +...+.++ .+.+.
T Consensus 26 ~k~vlITGasggIG~~~a~~L~~~G~--~Vv~~~R~~~~~~~~~~~l~~v~---~~~~Dl~d~~~v~~~~~~~~~~~~~i 100 (315)
T PRK06196 26 GKTAIVTGGYSGLGLETTRALAQAGA--HVIVPARRPDVAREALAGIDGVE---VVMLDLADLESVRAFAERFLDSGRRI 100 (315)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhhhCe---EEEccCCCHHHHHHHHHHHHhcCCCC
Confidence 46899999999999999999999987 89999987522 1222222111 11111 00111111 12578
Q ss_pred cEEEEcCCCCCCCC----CCHHHHHHHHHH----HHHHHHHHHhhhCCCeEEEEecC
Q 017551 90 DLVIIPAGVPRKPG----MTRDDLFNINAG----IVRTLCEGIAKCCPNATVNLISN 138 (369)
Q Consensus 90 DiVii~ag~p~k~g----~~r~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tN 138 (369)
|+||..||....+. ......+..|.. +.+.+.+.+.+.. .+.|+++|-
T Consensus 101 D~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~iV~vSS 156 (315)
T PRK06196 101 DILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGA-GARVVALSS 156 (315)
T ss_pred CEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCeEEEECC
Confidence 99999998643221 112333455544 4555666665443 356666653
No 301
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=96.07 E-value=0.055 Score=58.11 Aligned_cols=91 Identities=20% Similarity=0.192 Sum_probs=60.9
Q ss_pred CCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhc--CCCcEEEE
Q 017551 17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENAL--TGMDLVII 94 (369)
Q Consensus 17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al--~~ADiVii 94 (369)
....|||.|+||+|++|++++..|...+. ++.. ... |+.+. ..+...+ .+.|+||.
T Consensus 377 ~~~~mkiLVtGa~G~iG~~l~~~L~~~g~--~v~~-~~~-------~l~d~------------~~v~~~i~~~~pd~Vih 434 (668)
T PLN02260 377 GKPSLKFLIYGRTGWIGGLLGKLCEKQGI--AYEY-GKG-------RLEDR------------SSLLADIRNVKPTHVFN 434 (668)
T ss_pred CCCCceEEEECCCchHHHHHHHHHHhCCC--eEEe-ecc-------ccccH------------HHHHHHHHhhCCCEEEE
Confidence 34568999999999999999999988775 5421 110 11110 0111222 26899999
Q ss_pred cCCCCCCC--C---CCHHHHHHHHHHHHHHHHHHHhhhCC
Q 017551 95 PAGVPRKP--G---MTRDDLFNINAGIVRTLCEGIAKCCP 129 (369)
Q Consensus 95 ~ag~p~k~--g---~~r~~~~~~N~~i~~~i~~~i~~~~p 129 (369)
+|+....+ + ....+.+..|+.....+++.+.+...
T Consensus 435 ~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~ 474 (668)
T PLN02260 435 AAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENGL 474 (668)
T ss_pred CCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCC
Confidence 98764322 1 23566778999999999999998754
No 302
>PRK08219 short chain dehydrogenase; Provisional
Probab=96.07 E-value=0.062 Score=48.61 Aligned_cols=72 Identities=21% Similarity=0.221 Sum_probs=46.2
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEe----CCCChhhhcC---CCcEEE
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL----GQPQLENALT---GMDLVI 93 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~----~t~dl~~al~---~ADiVi 93 (369)
++|.|+||+|++|+.++..|+++ . +|+++|.+... ..++.+.. ..+..+. ...++.++++ +.|+||
T Consensus 4 ~~vlVtG~~g~iG~~l~~~l~~~-~--~V~~~~r~~~~--~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~id~vi 76 (227)
T PRK08219 4 PTALITGASRGIGAAIARELAPT-H--TLLLGGRPAER--LDELAAEL--PGATPFPVDLTDPEAIAAAVEQLGRLDVLV 76 (227)
T ss_pred CEEEEecCCcHHHHHHHHHHHhh-C--CEEEEeCCHHH--HHHHHHHh--ccceEEecCCCCHHHHHHHHHhcCCCCEEE
Confidence 58999999999999999999887 5 89999987522 11222111 1111111 1123444444 699999
Q ss_pred EcCCCC
Q 017551 94 IPAGVP 99 (369)
Q Consensus 94 i~ag~p 99 (369)
.++|.+
T Consensus 77 ~~ag~~ 82 (227)
T PRK08219 77 HNAGVA 82 (227)
T ss_pred ECCCcC
Confidence 998864
No 303
>PRK06500 short chain dehydrogenase; Provisional
Probab=96.06 E-value=0.044 Score=50.43 Aligned_cols=101 Identities=21% Similarity=0.213 Sum_probs=62.3
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCChh----------hhc
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQLE----------NAL 86 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~dl~----------~al 86 (369)
.++|.|+||+|++|+.++..|+..+. +|++++.+.. .....++ ..++..+. ..+|.+ +.+
T Consensus 6 ~k~vlItGasg~iG~~la~~l~~~g~--~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (249)
T PRK06500 6 GKTALITGGTSGIGLETARQFLAEGA--RVAITGRDPASLEAARAEL-----GESALVIRADAGDVAAQKALAQALAEAF 78 (249)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEecCCHHHHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence 35899999999999999999999987 8999998752 1111111 11222111 112221 223
Q ss_pred CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHhhh
Q 017551 87 TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKC 127 (369)
Q Consensus 87 ~~ADiVii~ag~p~k~---g~~r---~~~~~~N~~i~~~i~~~i~~~ 127 (369)
.+.|+||..+|..... ..+. ...+..|+.....+.+.+..+
T Consensus 79 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 125 (249)
T PRK06500 79 GRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPL 125 (249)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 4689999998864321 1122 345677777777777777643
No 304
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=96.06 E-value=0.042 Score=54.31 Aligned_cols=75 Identities=19% Similarity=0.267 Sum_probs=50.0
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC-----c----------------hhHH--HHhhcccCCCeEEEE
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-----T----------------PGVT--ADISHMDTGAVVRGF 76 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~-----~----------------~g~~--~dL~~~~~~~~v~~~ 76 (369)
..||.|||+ |.+|+.++..|+..|. .+|.|+|.+. + +..+ ..|........+..+
T Consensus 24 ~~~VlIiG~-GglGs~va~~La~aGv-g~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~~ 101 (338)
T PRK12475 24 EKHVLIVGA-GALGAANAEALVRAGI-GKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVPV 101 (338)
T ss_pred CCcEEEECC-CHHHHHHHHHHHHcCC-CEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEEE
Confidence 459999999 9999999999999884 5999999874 0 0111 122222222344433
Q ss_pred eC---CCChhhhcCCCcEEEEcC
Q 017551 77 LG---QPQLENALTGMDLVIIPA 96 (369)
Q Consensus 77 ~~---t~dl~~al~~ADiVii~a 96 (369)
.. ..++++.++++|+||.+.
T Consensus 102 ~~~~~~~~~~~~~~~~DlVid~~ 124 (338)
T PRK12475 102 VTDVTVEELEELVKEVDLIIDAT 124 (338)
T ss_pred eccCCHHHHHHHhcCCCEEEEcC
Confidence 21 134567789999999984
No 305
>PRK08605 D-lactate dehydrogenase; Validated
Probab=96.06 E-value=0.028 Score=55.38 Aligned_cols=64 Identities=27% Similarity=0.388 Sum_probs=45.8
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 96 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a 96 (369)
+.++|+|||. |.+|+.++..|+. +..-+|..+|....... .. .+.. .+++++++++||+|++..
T Consensus 145 ~g~~VgIIG~-G~IG~~vA~~L~~-~~g~~V~~~d~~~~~~~----~~-----~~~~---~~~l~ell~~aDvIvl~l 208 (332)
T PRK08605 145 KDLKVAVIGT-GRIGLAVAKIFAK-GYGSDVVAYDPFPNAKA----AT-----YVDY---KDTIEEAVEGADIVTLHM 208 (332)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHh-cCCCEEEEECCCccHhH----Hh-----hccc---cCCHHHHHHhCCEEEEeC
Confidence 3579999999 9999999999853 33338999998652211 10 1111 346889999999999985
No 306
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=96.05 E-value=0.086 Score=48.98 Aligned_cols=115 Identities=18% Similarity=0.189 Sum_probs=65.9
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCCh---hh-------hc
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL---EN-------AL 86 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~dl---~~-------al 86 (369)
.++|.|+||+|++|+.++..|...+. ++++.|.+. ......++.+.. .++..+. .-+|. .+ .+
T Consensus 11 ~k~vlVtG~s~gIG~~la~~l~~~G~--~vv~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~ 86 (255)
T PRK06113 11 GKCAIITGAGAGIGKEIAITFATAGA--SVVVSDINADAANHVVDEIQQLG--GQAFACRCDITSEQELSALADFALSKL 86 (255)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 46999999999999999999999887 889998875 222233343321 1222111 11222 12 23
Q ss_pred CCCcEEEEcCCCCCC--CCCCHHH---HHHHHHHHHHHHHHHHhhh---CCCeEEEEecC
Q 017551 87 TGMDLVIIPAGVPRK--PGMTRDD---LFNINAGIVRTLCEGIAKC---CPNATVNLISN 138 (369)
Q Consensus 87 ~~ADiVii~ag~p~k--~g~~r~~---~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN 138 (369)
...|++|..+|.... ...+..+ .+..|+.-...+.+.+..+ ...+.++++|.
T Consensus 87 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS 146 (255)
T PRK06113 87 GKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITS 146 (255)
T ss_pred CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEec
Confidence 457999999885321 1233322 3566766555555554422 23344555543
No 307
>PRK08589 short chain dehydrogenase; Validated
Probab=96.04 E-value=0.08 Score=49.95 Aligned_cols=113 Identities=16% Similarity=0.249 Sum_probs=65.2
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC-chhHHHHhhcccCCCeEEEEe-CCCC---hhhh-------cC
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFL-GQPQ---LENA-------LT 87 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~-~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~a-------l~ 87 (369)
.+++.|+||+|++|..++..|+..+. +|+++|.++ ......++.+.. .++..+. .-++ ..++ +.
T Consensus 6 ~k~vlItGas~gIG~aia~~l~~~G~--~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 81 (272)
T PRK08589 6 NKVAVITGASTGIGQASAIALAQEGA--YVLAVDIAEAVSETVDKIKSNG--GKAKAYHVDISDEQQVKDFASEIKEQFG 81 (272)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCcHHHHHHHHHHHhcC--CeEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence 45899999999999999999999987 999999874 222333443321 1222211 1112 2222 23
Q ss_pred CCcEEEEcCCCCCCCC----CCH---HHHHHHHHH----HHHHHHHHHhhhCCCeEEEEecC
Q 017551 88 GMDLVIIPAGVPRKPG----MTR---DDLFNINAG----IVRTLCEGIAKCCPNATVNLISN 138 (369)
Q Consensus 88 ~ADiVii~ag~p~k~g----~~r---~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tN 138 (369)
..|++|..+|.....+ .+. ...+..|+. +.+.+.+.+.+. .+.|++++.
T Consensus 82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~g~iv~isS 141 (272)
T PRK08589 82 RVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQ--GGSIINTSS 141 (272)
T ss_pred CcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCEEEEeCc
Confidence 5799999998753221 122 223344544 344445544433 366777664
No 308
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=96.03 E-value=0.059 Score=46.05 Aligned_cols=33 Identities=24% Similarity=0.508 Sum_probs=29.8
Q ss_pred EEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551 22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 56 (369)
Q Consensus 22 KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~ 56 (369)
||.|+|+ |.+|+.++..|+..|. .++.++|.+.
T Consensus 1 ~VliiG~-GglGs~ia~~L~~~Gv-~~i~ivD~d~ 33 (143)
T cd01483 1 RVLLVGL-GGLGSEIALNLARSGV-GKITLIDFDT 33 (143)
T ss_pred CEEEECC-CHHHHHHHHHHHHCCC-CEEEEEcCCC
Confidence 6899999 9999999999999886 5899999874
No 309
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=96.03 E-value=0.13 Score=46.92 Aligned_cols=116 Identities=22% Similarity=0.316 Sum_probs=65.6
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc---hhHHHHhhcccCCCeEEEEe-CCCC---hhhh------
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMDTGAVVRGFL-GQPQ---LENA------ 85 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~---~g~~~dL~~~~~~~~v~~~~-~t~d---l~~a------ 85 (369)
+.++|.|+||+|++|+.++..|...+. ++++...+.. .....++... ..++..+. .-++ +.++
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~--~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~ 79 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGA--NVVINYASSEAGAEALVAEIGAL--GGKALAVQGDVSDAESVERAVDEAKA 79 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCchhHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 346999999999999999999998887 7766665542 1222223221 12222211 1112 2222
Q ss_pred -cCCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHhhhC---CCeEEEEecC
Q 017551 86 -LTGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKCC---PNATVNLISN 138 (369)
Q Consensus 86 -l~~ADiVii~ag~p~k~---g~~r---~~~~~~N~~i~~~i~~~i~~~~---p~a~viv~tN 138 (369)
+.+.|+||..+|..... ..+. ...+..|+.....+.+.+..+. ....++++|.
T Consensus 80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss 142 (248)
T PRK05557 80 EFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISS 142 (248)
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcc
Confidence 23689999998864321 1122 2234567666666666666543 2345555553
No 310
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=96.03 E-value=0.044 Score=51.42 Aligned_cols=114 Identities=14% Similarity=0.124 Sum_probs=75.0
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCC-eEEEEeCC-------CChhhhcCCCc
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGA-VVRGFLGQ-------PQLENALTGMD 90 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~-~v~~~~~t-------~dl~~al~~AD 90 (369)
+-+.|+|||+++|...+..|...|. .|+|...+. +...+.++.+....+ .+.. +.. ..+.+.+...|
T Consensus 7 kv~lITGASSGiG~A~A~~l~~~G~--~vvl~aRR~drL~~la~~~~~~~~~~~~~DV-tD~~~~~~~i~~~~~~~g~iD 83 (246)
T COG4221 7 KVALITGASSGIGEATARALAEAGA--KVVLAARREERLEALADEIGAGAALALALDV-TDRAAVEAAIEALPEEFGRID 83 (246)
T ss_pred cEEEEecCcchHHHHHHHHHHHCCC--eEEEEeccHHHHHHHHHhhccCceEEEeecc-CCHHHHHHHHHHHHHhhCccc
Confidence 4578999999999999999999999 999999987 455666666311101 1111 111 12445678899
Q ss_pred EEEEcCCCCCCCC------CCHHHHHHHHHHHHHHHHHH----HhhhCCCeEEEEecC
Q 017551 91 LVIIPAGVPRKPG------MTRDDLFNINAGIVRTLCEG----IAKCCPNATVNLISN 138 (369)
Q Consensus 91 iVii~ag~p~k~g------~~r~~~~~~N~~i~~~i~~~----i~~~~p~a~viv~tN 138 (369)
++|..||..+... .+...++..|+.-+...... +.+. ..+.||+++-
T Consensus 84 iLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r-~~G~IiN~~S 140 (246)
T COG4221 84 ILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVER-KSGHIINLGS 140 (246)
T ss_pred EEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhc-CCceEEEecc
Confidence 9999999765311 12456788887665555444 4433 3557888764
No 311
>PRK05855 short chain dehydrogenase; Validated
Probab=96.03 E-value=0.064 Score=55.67 Aligned_cols=117 Identities=17% Similarity=0.184 Sum_probs=69.4
Q ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCCh---hhh------
Q 017551 18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQL---ENA------ 85 (369)
Q Consensus 18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~dl---~~a------ 85 (369)
.+.+++.|+||+|++|..++..|+..|. +|++.|.+.. ...+.++.... ..+..+. .-+|. .+.
T Consensus 313 ~~~~~~lv~G~s~giG~~~a~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~~~~~~~~~~~ 388 (582)
T PRK05855 313 FSGKLVVVTGAGSGIGRETALAFAREGA--EVVASDIDEAAAERTAELIRAAG--AVAHAYRVDVSDADAMEAFAEWVRA 388 (582)
T ss_pred CCCCEEEEECCcCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 3457899999999999999999999988 8999998762 22333333211 2222221 11222 122
Q ss_pred -cCCCcEEEEcCCCCCCC---CCCH---HHHHHHHHH----HHHHHHHHHhhhCCCeEEEEecC
Q 017551 86 -LTGMDLVIIPAGVPRKP---GMTR---DDLFNINAG----IVRTLCEGIAKCCPNATVNLISN 138 (369)
Q Consensus 86 -l~~ADiVii~ag~p~k~---g~~r---~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tN 138 (369)
+...|++|..||..... ..+. ...+..|.. ..+.+.+.+.+....+.|+++|-
T Consensus 389 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS 452 (582)
T PRK05855 389 EHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVAS 452 (582)
T ss_pred hcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECC
Confidence 23579999999975421 1222 233456643 44445555555555566776654
No 312
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=96.03 E-value=0.014 Score=52.10 Aligned_cols=95 Identities=25% Similarity=0.305 Sum_probs=60.0
Q ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551 18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 97 (369)
Q Consensus 18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag 97 (369)
-..++|.|+|. |.||+.++..+..-+. +|+.||....... ...+ ..+. ..++++.++.||+|++...
T Consensus 34 l~g~tvgIiG~-G~IG~~vA~~l~~fG~--~V~~~d~~~~~~~--~~~~----~~~~----~~~l~ell~~aDiv~~~~p 100 (178)
T PF02826_consen 34 LRGKTVGIIGY-GRIGRAVARRLKAFGM--RVIGYDRSPKPEE--GADE----FGVE----YVSLDELLAQADIVSLHLP 100 (178)
T ss_dssp STTSEEEEEST-SHHHHHHHHHHHHTT---EEEEEESSCHHHH--HHHH----TTEE----ESSHHHHHHH-SEEEE-SS
T ss_pred cCCCEEEEEEE-cCCcCeEeeeeecCCc--eeEEecccCChhh--hccc----ccce----eeehhhhcchhhhhhhhhc
Confidence 34579999999 9999999999997777 9999999863222 1111 1112 2367899999999999842
Q ss_pred -CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCC
Q 017551 98 -VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP 139 (369)
Q Consensus 98 -~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP 139 (369)
.|...++-.. +.++..-|++++||++--
T Consensus 101 lt~~T~~li~~--------------~~l~~mk~ga~lvN~aRG 129 (178)
T PF02826_consen 101 LTPETRGLINA--------------EFLAKMKPGAVLVNVARG 129 (178)
T ss_dssp SSTTTTTSBSH--------------HHHHTSTTTEEEEESSSG
T ss_pred cccccceeeee--------------eeeeccccceEEEeccch
Confidence 2222232111 223334478889988743
No 313
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=96.01 E-value=0.048 Score=50.80 Aligned_cols=99 Identities=22% Similarity=0.309 Sum_probs=63.0
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCC-CcEEEEEeCCC----chh-----HHHHhhcccCCCeEEEEeCCCChhhhcCC
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPL-VSVLHLYDVVN----TPG-----VTADISHMDTGAVVRGFLGQPQLENALTG 88 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~-~~el~L~D~~~----~~g-----~~~dL~~~~~~~~v~~~~~t~dl~~al~~ 88 (369)
+..||.|+|| |.+|..++..|...+. -++|.++|.+. ... ....+.+...... . ..++.+++++
T Consensus 24 ~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~---~--~~~l~~~l~~ 97 (226)
T cd05311 24 EEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK---T--GGTLKEALKG 97 (226)
T ss_pred cCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc---c--cCCHHHHHhc
Confidence 4569999999 9999999999988764 23899999984 111 1122222110011 1 1357788999
Q ss_pred CcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCC
Q 017551 89 MDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN 141 (369)
Q Consensus 89 ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~ 141 (369)
+|+||-+.+ +|+-. .+..+.+ +++.+++..+||..
T Consensus 98 ~dvlIgaT~----~G~~~-----------~~~l~~m---~~~~ivf~lsnP~~ 132 (226)
T cd05311 98 ADVFIGVSR----PGVVK-----------KEMIKKM---AKDPIVFALANPVP 132 (226)
T ss_pred CCEEEeCCC----CCCCC-----------HHHHHhh---CCCCEEEEeCCCCC
Confidence 999999754 35411 1233333 46777778889985
No 314
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=95.98 E-value=0.086 Score=48.68 Aligned_cols=112 Identities=18% Similarity=0.317 Sum_probs=64.4
Q ss_pred EEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhh-------cCC
Q 017551 22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENA-------LTG 88 (369)
Q Consensus 22 KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~a-------l~~ 88 (369)
++.|+||+|++|..++..|.+.+. +|++++.+.. .....++.+. ...+..+. .-+| +.++ +..
T Consensus 2 ~~lItG~sg~iG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~ 77 (254)
T TIGR02415 2 VALVTGGAQGIGKGIAERLAKDGF--AVAVADLNEETAKETAKEINQA--GGKAVAYKLDVSDKDQVFSAIDQAAEKFGG 77 (254)
T ss_pred EEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 689999999999999999999887 8999998752 2222333322 12233221 1122 2122 235
Q ss_pred CcEEEEcCCCCC-CC--CCCHH---HHHHHHHH----HHHHHHHHHhhhCCCeEEEEec
Q 017551 89 MDLVIIPAGVPR-KP--GMTRD---DLFNINAG----IVRTLCEGIAKCCPNATVNLIS 137 (369)
Q Consensus 89 ADiVii~ag~p~-k~--g~~r~---~~~~~N~~----i~~~i~~~i~~~~p~a~viv~t 137 (369)
.|+||..+|... .+ +.+.. ..+..|.. +++.+.+.+.+....+.++++|
T Consensus 78 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~s 136 (254)
T TIGR02415 78 FDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAA 136 (254)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEec
Confidence 799999988632 11 22332 23455543 3344555555544446666554
No 315
>PRK09134 short chain dehydrogenase; Provisional
Probab=95.98 E-value=0.089 Score=48.97 Aligned_cols=114 Identities=16% Similarity=0.163 Sum_probs=64.7
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC---chhHHHHhhcccCCCeEEEEe-CCCC---hhhhc-----
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL----- 86 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~---~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al----- 86 (369)
..+++.|+||+|++|..++..|...+. .+++.+... .......+.+. ..++..+. .-+| +.+++
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~~~ 83 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGF--DVAVHYNRSRDEAEALAAEIRAL--GRRAVALQADLADEAEVRALVARASA 83 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 356899999999999999999998886 787776643 11222223221 12333221 1122 22233
Q ss_pred --CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhhC---CCeEEEEe
Q 017551 87 --TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKCC---PNATVNLI 136 (369)
Q Consensus 87 --~~ADiVii~ag~p~k~---g~~---r~~~~~~N~~i~~~i~~~i~~~~---p~a~viv~ 136 (369)
...|+||..+|..... ..+ ....+..|+.-...+.+.+..+. ..+.++++
T Consensus 84 ~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ 144 (258)
T PRK09134 84 ALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNM 144 (258)
T ss_pred HcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEE
Confidence 3469999999863321 122 23456677665555555555443 23455544
No 316
>PRK08291 ectoine utilization protein EutC; Validated
Probab=95.97 E-value=0.031 Score=54.92 Aligned_cols=72 Identities=15% Similarity=0.251 Sum_probs=50.3
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 96 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a 96 (369)
.++|+|+|+ |..|...+..+.....+.+|.++|.+. ....+.++.+.. ...+.. .+|+++++.+||+||.+.
T Consensus 132 ~~~v~IiGa-G~~a~~~~~al~~~~~~~~V~v~~R~~~~a~~l~~~~~~~~-g~~v~~---~~d~~~al~~aDiVi~aT 205 (330)
T PRK08291 132 ASRAAVIGA-GEQARLQLEALTLVRPIREVRVWARDAAKAEAYAADLRAEL-GIPVTV---ARDVHEAVAGADIIVTTT 205 (330)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHhhcc-CceEEE---eCCHHHHHccCCEEEEee
Confidence 469999999 989988777776544467999999986 333444444321 223332 357889999999998874
No 317
>PRK07454 short chain dehydrogenase; Provisional
Probab=95.97 E-value=0.078 Score=48.71 Aligned_cols=115 Identities=17% Similarity=0.204 Sum_probs=64.7
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCCh---hhhc------
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQL---ENAL------ 86 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~dl---~~al------ 86 (369)
..+++.|+||+|++|+.++..|+.++. +|+++|.+.. .....++... ..++..+. .-+|. ..++
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGW--DLALVARSQDALEALAAELRST--GVKAAAYSIDLSNPEAIAPGIAELLEQ 80 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhC--CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 345899999999999999999999887 8999998752 2222222221 12222221 11222 2222
Q ss_pred -CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHH----HHHHHHHhhhCCCeEEEEecC
Q 017551 87 -TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIV----RTLCEGIAKCCPNATVNLISN 138 (369)
Q Consensus 87 -~~ADiVii~ag~p~k~---g~~---r~~~~~~N~~i~----~~i~~~i~~~~p~a~viv~tN 138 (369)
.+.|+||..+|..... ..+ -...+..|+... +.+.+.+.+. ..+.++++|.
T Consensus 81 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~isS 142 (241)
T PRK07454 81 FGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRAR-GGGLIINVSS 142 (241)
T ss_pred cCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhc-CCcEEEEEcc
Confidence 3589999999864321 122 223345555543 3344444433 2345666653
No 318
>PRK08628 short chain dehydrogenase; Provisional
Probab=95.97 E-value=0.12 Score=47.87 Aligned_cols=114 Identities=13% Similarity=0.115 Sum_probs=65.6
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc-hhHHHHhhcccCCCeEEEEe-CCCC---hhhhc-------C
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------T 87 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~-~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al-------~ 87 (369)
.++|.|+||+|++|..++..|++.+. ++++.+.+.. .....++.... .++..+. .-++ +..++ .
T Consensus 7 ~~~ilItGasggiG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 82 (258)
T PRK08628 7 DKVVIVTGGASGIGAAISLRLAEEGA--IPVIFGRSAPDDEFAEELRALQ--PRAEFVQVDLTDDAQCRDAVEQTVAKFG 82 (258)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHcCC--cEEEEcCChhhHHHHHHHHhcC--CceEEEEccCCCHHHHHHHHHHHHHhcC
Confidence 45899999999999999999999887 7888888762 22233343221 2222221 1122 22333 2
Q ss_pred CCcEEEEcCCCCCCCC--C---CHHHHHHHHHHHHHHHHHHHhhhC--CCeEEEEec
Q 017551 88 GMDLVIIPAGVPRKPG--M---TRDDLFNINAGIVRTLCEGIAKCC--PNATVNLIS 137 (369)
Q Consensus 88 ~ADiVii~ag~p~k~g--~---~r~~~~~~N~~i~~~i~~~i~~~~--p~a~viv~t 137 (369)
..|+||..+|.....+ . +-...+..|+.....+.+.+..+. ..+.++++|
T Consensus 83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~s 139 (258)
T PRK08628 83 RIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNIS 139 (258)
T ss_pred CCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEEC
Confidence 5799999998643222 1 123345667665555555544322 234455444
No 319
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=95.97 E-value=0.041 Score=53.34 Aligned_cols=67 Identities=18% Similarity=0.203 Sum_probs=48.5
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc-hhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 96 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~-~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a 96 (369)
...||.|+|+ |.+|..++..|+..+. +|..+|.+.. ...+.++ ..... ...++.+.++++|+||.+.
T Consensus 151 ~g~kvlViG~-G~iG~~~a~~L~~~Ga--~V~v~~r~~~~~~~~~~~-----G~~~~---~~~~l~~~l~~aDiVI~t~ 218 (296)
T PRK08306 151 HGSNVLVLGF-GRTGMTLARTLKALGA--NVTVGARKSAHLARITEM-----GLSPF---HLSELAEEVGKIDIIFNTI 218 (296)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHc-----CCeee---cHHHHHHHhCCCCEEEECC
Confidence 4679999999 9999999999998886 9999999852 2222211 11111 1235678889999999985
No 320
>PRK06949 short chain dehydrogenase; Provisional
Probab=95.97 E-value=0.079 Score=49.07 Aligned_cols=36 Identities=19% Similarity=0.229 Sum_probs=32.2
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 56 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~ 56 (369)
..++|.|+||+|++|+.++..|+..+. +|++.+.+.
T Consensus 8 ~~k~ilItGasg~IG~~~a~~l~~~G~--~Vi~~~r~~ 43 (258)
T PRK06949 8 EGKVALVTGASSGLGARFAQVLAQAGA--KVVLASRRV 43 (258)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCH
Confidence 357999999999999999999998887 899999876
No 321
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.96 E-value=0.079 Score=48.49 Aligned_cols=102 Identities=23% Similarity=0.311 Sum_probs=58.4
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEE-eCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhhcC-----
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLY-DVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENALT----- 87 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~-D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al~----- 87 (369)
.++|.|+||+|++|+.++..|++.+. ++++. +.+.. ......+... ...+.... .-+| +.+.++
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~--~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGA--KVVIAYDINEEAAQELLEEIKEE--GGDAIAVKADVSSEEDVENLVEQIVEK 80 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 35899999999999999999998887 77777 88652 1122222221 12333321 1122 222232
Q ss_pred --CCcEEEEcCCCCCC-C--CCCH---HHHHHHHHHHHHHHHHHHh
Q 017551 88 --GMDLVIIPAGVPRK-P--GMTR---DDLFNINAGIVRTLCEGIA 125 (369)
Q Consensus 88 --~ADiVii~ag~p~k-~--g~~r---~~~~~~N~~i~~~i~~~i~ 125 (369)
+.|+||..+|.... + ..+. ...+..|..-...+.+.+.
T Consensus 81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 126 (247)
T PRK05565 81 FGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYAL 126 (247)
T ss_pred hCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence 78999999886421 1 1222 2345566665444444443
No 322
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=95.95 E-value=0.069 Score=51.04 Aligned_cols=95 Identities=24% Similarity=0.273 Sum_probs=61.1
Q ss_pred EEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcC-CCcEEEEcCCCCCC
Q 017551 23 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALT-GMDLVIIPAGVPRK 101 (369)
Q Consensus 23 I~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~-~ADiVii~ag~p~k 101 (369)
|+|.||+|+||+++...|...++ +|..+-.+..+.. . ..| ..+... +.+.+... ++|+||..||.|--
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh--~v~iltR~~~~~~-~-~~~----~~v~~~---~~~~~~~~~~~DavINLAG~~I~ 69 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGH--QVTILTRRPPKAS-Q-NLH----PNVTLW---EGLADALTLGIDAVINLAGEPIA 69 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCC--eEEEEEcCCcchh-h-hcC----cccccc---chhhhcccCCCCEEEECCCCccc
Confidence 67999999999999999999998 8888887752211 1 111 122211 11223333 79999999998753
Q ss_pred CC----CCHHHHHHHHHHHHHHHHHHHhhhC
Q 017551 102 PG----MTRDDLFNINAGIVRTLCEGIAKCC 128 (369)
Q Consensus 102 ~g----~~r~~~~~~N~~i~~~i~~~i~~~~ 128 (369)
.. +.-..+..--+...+.+.+.|.+..
T Consensus 70 ~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~ 100 (297)
T COG1090 70 ERRWTEKQKEEIRQSRINTTEKLVELIAASE 100 (297)
T ss_pred cccCCHHHHHHHHHHHhHHHHHHHHHHHhcc
Confidence 22 1122334444667778888888665
No 323
>PRK00048 dihydrodipicolinate reductase; Provisional
Probab=95.95 E-value=0.36 Score=45.74 Aligned_cols=68 Identities=25% Similarity=0.263 Sum_probs=45.3
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 96 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a 96 (369)
++||+|+|++|.||+.++..+...+-+.-+.++|.+....... . ...+.. ++|+++.++++|+||...
T Consensus 1 ~mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~~-----~-~~~i~~---~~dl~~ll~~~DvVid~t 68 (257)
T PRK00048 1 MIKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVGQ-----G-ALGVAI---TDDLEAVLADADVLIDFT 68 (257)
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcccccc-----C-CCCccc---cCCHHHhccCCCEEEECC
Confidence 4799999988999999998887665444455688775211111 1 112222 467888888999999764
No 324
>PRK09072 short chain dehydrogenase; Provisional
Probab=95.94 E-value=0.14 Score=47.82 Aligned_cols=114 Identities=22% Similarity=0.235 Sum_probs=66.8
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCChh---h------hcC
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQLE---N------ALT 87 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~dl~---~------al~ 87 (369)
.++|.|+||+|++|..++..|+.+|. +|+++|.+.. .....++.+ ..++..+. .-+|.+ + ++.
T Consensus 5 ~~~vlItG~s~~iG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~d~~~~~~~~~~~~~~~ 79 (263)
T PRK09072 5 DKRVLLTGASGGIGQALAEALAAAGA--RLLLVGRNAEKLEALAARLPY---PGRHRWVVADLTSEAGREAVLARAREMG 79 (263)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHhc---CCceEEEEccCCCHHHHHHHHHHHHhcC
Confidence 45899999999999999999999887 8999998762 222222311 12333221 112221 1 135
Q ss_pred CCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecC
Q 017551 88 GMDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISN 138 (369)
Q Consensus 88 ~ADiVii~ag~p~k~g---~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN 138 (369)
..|+||..+|...... .+ -...+..|+.....+.+.+..+ .+.+.+++++.
T Consensus 80 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS 139 (263)
T PRK09072 80 GINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGS 139 (263)
T ss_pred CCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecC
Confidence 6799999998753211 12 1334556766555555555432 22355666654
No 325
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase. The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional
Probab=95.94 E-value=0.022 Score=51.74 Aligned_cols=77 Identities=21% Similarity=0.257 Sum_probs=52.0
Q ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch--hHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEc
Q 017551 18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP 95 (369)
Q Consensus 18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~--g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ 95 (369)
-..++|+|||.|.-+|.+++.+|++.+. .+.++|++.-. .....+.|..+ ..+. -+.++.+.++.||+||.+
T Consensus 60 l~GK~vvVIGrS~iVGkPla~lL~~~~A--tVti~~~~~~~~~~~~~~~~hs~t--~~~~--~~~~l~~~~~~ADIVIsA 133 (197)
T cd01079 60 LYGKTITIINRSEVVGRPLAALLANDGA--RVYSVDINGIQVFTRGESIRHEKH--HVTD--EEAMTLDCLSQSDVVITG 133 (197)
T ss_pred CCCCEEEEECCCccchHHHHHHHHHCCC--EEEEEecCcccccccccccccccc--cccc--hhhHHHHHhhhCCEEEEc
Confidence 4457999999988999999999998886 89999987611 10011122111 0000 011267889999999999
Q ss_pred CCCCC
Q 017551 96 AGVPR 100 (369)
Q Consensus 96 ag~p~ 100 (369)
.|.|.
T Consensus 134 vG~~~ 138 (197)
T cd01079 134 VPSPN 138 (197)
T ss_pred cCCCC
Confidence 88773
No 326
>PRK06398 aldose dehydrogenase; Validated
Probab=95.94 E-value=0.026 Score=52.92 Aligned_cols=107 Identities=14% Similarity=0.180 Sum_probs=61.8
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEE-eCCCChhhh-------cCCCcE
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGF-LGQPQLENA-------LTGMDL 91 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~-~~t~dl~~a-------l~~ADi 91 (369)
.+++.|+||+|++|..++..|+..|. +|+++|.+..... .. ..+... +...+.+++ +...|+
T Consensus 6 gk~vlItGas~gIG~~ia~~l~~~G~--~Vi~~~r~~~~~~-----~~---~~~~~D~~~~~~i~~~~~~~~~~~~~id~ 75 (258)
T PRK06398 6 DKVAIVTGGSQGIGKAVVNRLKEEGS--NVINFDIKEPSYN-----DV---DYFKVDVSNKEQVIKGIDYVISKYGRIDI 75 (258)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--eEEEEeCCccccC-----ce---EEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 35899999999999999999999987 8999998752110 00 001100 001122222 346899
Q ss_pred EEEcCCCCCC-C--CCCH---HHHHHHHHHHH----HHHHHHHhhhCCCeEEEEec
Q 017551 92 VIIPAGVPRK-P--GMTR---DDLFNINAGIV----RTLCEGIAKCCPNATVNLIS 137 (369)
Q Consensus 92 Vii~ag~p~k-~--g~~r---~~~~~~N~~i~----~~i~~~i~~~~p~a~viv~t 137 (369)
+|..+|.+.. + ..+. ...+..|+.-. +.+.+.+.+ ...+.++++|
T Consensus 76 li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~g~iv~is 130 (258)
T PRK06398 76 LVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLK-QDKGVIINIA 130 (258)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH-cCCeEEEEeC
Confidence 9999987432 1 1222 23355665544 444444433 2345666665
No 327
>COG0345 ProC Pyrroline-5-carboxylate reductase [Amino acid transport and metabolism]
Probab=95.94 E-value=0.056 Score=51.60 Aligned_cols=96 Identities=16% Similarity=0.211 Sum_probs=63.5
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCC--CCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINP--LVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 97 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~--~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag 97 (369)
++||++||+ |+||+.++..|...+ ...+|...|.++.+.. ++.... +.. . +++..++...+|+||++.
T Consensus 1 ~~~IgfIG~-G~Mg~Ai~~gl~~~g~~~~~~I~v~~~~~e~~~--~l~~~~-g~~-~----~~~~~~~~~~advv~Lav- 70 (266)
T COG0345 1 MMKIGFIGA-GNMGEAILSGLLKSGALPPEEIIVTNRSEEKRA--ALAAEY-GVV-T----TTDNQEAVEEADVVFLAV- 70 (266)
T ss_pred CceEEEEcc-CHHHHHHHHHHHhcCCCCcceEEEeCCCHHHHH--HHHHHc-CCc-c----cCcHHHHHhhCCEEEEEe-
Confidence 369999999 999999999998887 2468888888763222 233221 111 1 345568899999999985
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCC
Q 017551 98 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV 140 (369)
Q Consensus 98 ~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv 140 (369)
|| ..+.++...++...++-++|-+.-.+
T Consensus 71 ---KP------------q~~~~vl~~l~~~~~~~lvISiaAGv 98 (266)
T COG0345 71 ---KP------------QDLEEVLSKLKPLTKDKLVISIAAGV 98 (266)
T ss_pred ---Ch------------HhHHHHHHHhhcccCCCEEEEEeCCC
Confidence 33 23556777776644555555544333
No 328
>PRK08226 short chain dehydrogenase; Provisional
Probab=95.94 E-value=0.089 Score=49.01 Aligned_cols=114 Identities=22% Similarity=0.283 Sum_probs=64.7
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc-hhHHHHhhcccCCCeEEEEe-CCCC---hhhh-------cC
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFL-GQPQ---LENA-------LT 87 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~-~g~~~dL~~~~~~~~v~~~~-~t~d---l~~a-------l~ 87 (369)
.+++.|+||+|++|+.++..|...+. +|++++.+.. ......+... ..++..+. .-++ +.+. +.
T Consensus 6 ~~~~lItG~s~giG~~la~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~ 81 (263)
T PRK08226 6 GKTALITGALQGIGEGIARVFARHGA--NLILLDISPEIEKLADELCGR--GHRCTAVVADVRDPASVAAAIKRAKEKEG 81 (263)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC--EEEEecCCHHHHHHHHHHHHh--CCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 46899999999999999999999887 8999998752 2222222211 12222221 1122 2222 23
Q ss_pred CCcEEEEcCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHHHhhh---CCCeEEEEec
Q 017551 88 GMDLVIIPAGVPRK-P--GMT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLIS 137 (369)
Q Consensus 88 ~ADiVii~ag~p~k-~--g~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~t 137 (369)
..|+||..+|.... + ..+ ....+..|+.....+.+.+..+ ...+.++++|
T Consensus 82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~is 140 (263)
T PRK08226 82 RIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMS 140 (263)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEC
Confidence 57999999986321 1 111 2234566666555555554432 1234555554
No 329
>PRK14806 bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional
Probab=95.93 E-value=0.052 Score=59.01 Aligned_cols=67 Identities=21% Similarity=0.398 Sum_probs=47.8
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch-hHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 96 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~-g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a 96 (369)
.||+|||+ |.+|..++..++..++..+|..+|.+... ..+.++. .... ..+++.++++++|+||++.
T Consensus 4 ~~I~IIG~-G~mG~ala~~l~~~G~~~~V~~~d~~~~~~~~a~~~g-----~~~~---~~~~~~~~~~~aDvVilav 71 (735)
T PRK14806 4 GRVVVIGL-GLIGGSFAKALRERGLAREVVAVDRRAKSLELAVSLG-----VIDR---GEEDLAEAVSGADVIVLAV 71 (735)
T ss_pred cEEEEEee-CHHHHHHHHHHHhcCCCCEEEEEECChhHHHHHHHCC-----CCCc---ccCCHHHHhcCCCEEEECC
Confidence 58999999 99999999999988754479999998622 1222111 1101 1346678899999999985
No 330
>PRK06523 short chain dehydrogenase; Provisional
Probab=95.91 E-value=0.015 Score=54.09 Aligned_cols=108 Identities=19% Similarity=0.235 Sum_probs=63.3
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEe-CCCC----------hhhhcC
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQ----------LENALT 87 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~-~t~d----------l~~al~ 87 (369)
+.++|.|+||+|++|+.++..|+..+. +|++.+.+.... +.. .+.... .-+| ..+.+.
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~--~v~~~~r~~~~~----~~~-----~~~~~~~D~~~~~~~~~~~~~~~~~~~ 76 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGA--RVVTTARSRPDD----LPE-----GVEFVAADLTTAEGCAAVARAVLERLG 76 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCC--EEEEEeCChhhh----cCC-----ceeEEecCCCCHHHHHHHHHHHHHHcC
Confidence 346899999999999999999999887 899999875211 110 111110 0111 123345
Q ss_pred CCcEEEEcCCCCCCC-C----CC---HHHHHHHHHH----HHHHHHHHHhhhCCCeEEEEecC
Q 017551 88 GMDLVIIPAGVPRKP-G----MT---RDDLFNINAG----IVRTLCEGIAKCCPNATVNLISN 138 (369)
Q Consensus 88 ~ADiVii~ag~p~k~-g----~~---r~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tN 138 (369)
..|+||..+|....+ + .+ ....+..|+. +.+.+.+.+.+.. .+.++++|.
T Consensus 77 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~ii~isS 138 (260)
T PRK06523 77 GVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARG-SGVIIHVTS 138 (260)
T ss_pred CCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CcEEEEEec
Confidence 789999999864211 1 12 2233445544 3445555555443 345666654
No 331
>PLN03139 formate dehydrogenase; Provisional
Probab=95.90 E-value=0.054 Score=54.53 Aligned_cols=94 Identities=23% Similarity=0.222 Sum_probs=60.3
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV 98 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~ 98 (369)
..++|+|||. |.||+.++..+..-+. +|+.||......... .+ ..+.. ..++++.+++||+|++..
T Consensus 198 ~gktVGIVG~-G~IG~~vA~~L~afG~--~V~~~d~~~~~~~~~--~~----~g~~~---~~~l~ell~~sDvV~l~l-- 263 (386)
T PLN03139 198 EGKTVGTVGA-GRIGRLLLQRLKPFNC--NLLYHDRLKMDPELE--KE----TGAKF---EEDLDAMLPKCDVVVINT-- 263 (386)
T ss_pred CCCEEEEEee-cHHHHHHHHHHHHCCC--EEEEECCCCcchhhH--hh----cCcee---cCCHHHHHhhCCEEEEeC--
Confidence 4579999999 9999999999987666 899999864211111 11 11121 246889999999999984
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551 99 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 137 (369)
Q Consensus 99 p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 137 (369)
|..+ .+-.++. .+.+....|.+++|+.+
T Consensus 264 Plt~---------~T~~li~--~~~l~~mk~ga~lIN~a 291 (386)
T PLN03139 264 PLTE---------KTRGMFN--KERIAKMKKGVLIVNNA 291 (386)
T ss_pred CCCH---------HHHHHhC--HHHHhhCCCCeEEEECC
Confidence 3211 1112221 13444445889888886
No 332
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=95.90 E-value=0.025 Score=52.03 Aligned_cols=92 Identities=14% Similarity=0.146 Sum_probs=57.6
Q ss_pred EEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEE-EEe-CCCChhhhcCCCcEEEEcCCCCC
Q 017551 23 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVR-GFL-GQPQLENALTGMDLVIIPAGVPR 100 (369)
Q Consensus 23 I~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~-~~~-~t~dl~~al~~ADiVii~ag~p~ 100 (369)
|+|+||+|.+|+.++..|...+. +|..+=.+........|.+.. ..+. ... ...++.++|+|+|.|++..+...
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~--~V~~l~R~~~~~~~~~l~~~g--~~vv~~d~~~~~~l~~al~g~d~v~~~~~~~~ 76 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGF--SVRALVRDPSSDRAQQLQALG--AEVVEADYDDPESLVAALKGVDAVFSVTPPSH 76 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTG--CEEEEESSSHHHHHHHHHHTT--TEEEES-TT-HHHHHHHHTTCSEEEEESSCSC
T ss_pred CEEECCccHHHHHHHHHHHhCCC--CcEEEEeccchhhhhhhhccc--ceEeecccCCHHHHHHHHcCCceEEeecCcch
Confidence 78999999999999999998766 777776665333333344432 2222 111 12456789999999999865332
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhhhC
Q 017551 101 KPGMTRDDLFNINAGIVRTLCEGIAKCC 128 (369)
Q Consensus 101 k~g~~r~~~~~~N~~i~~~i~~~i~~~~ 128 (369)
..+ .+....++++..+..
T Consensus 77 ---~~~-------~~~~~~li~Aa~~ag 94 (233)
T PF05368_consen 77 ---PSE-------LEQQKNLIDAAKAAG 94 (233)
T ss_dssp ---CCH-------HHHHHHHHHHHHHHT
T ss_pred ---hhh-------hhhhhhHHHhhhccc
Confidence 111 333445666666655
No 333
>TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type. This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity.
Probab=95.90 E-value=0.034 Score=54.62 Aligned_cols=70 Identities=16% Similarity=0.154 Sum_probs=50.6
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEc
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP 95 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ 95 (369)
..+++|||+ |.+|...+..+.....+.+|.+||.+. +...+.++.+. ...+.. ..+.++++++||+|+.+
T Consensus 128 ~~~lgiiG~-G~qA~~~l~al~~~~~~~~v~V~~r~~~~~~~~~~~~~~~--g~~v~~---~~~~~eav~~aDiVita 199 (325)
T TIGR02371 128 SSVLGIIGA-GRQAWTQLEALSRVFDLEEVSVYCRTPSTREKFALRASDY--EVPVRA---ATDPREAVEGCDILVTT 199 (325)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhh--CCcEEE---eCCHHHHhccCCEEEEe
Confidence 469999999 999998776666555678999999987 33344444431 223443 35678999999999986
No 334
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=95.89 E-value=0.054 Score=49.31 Aligned_cols=113 Identities=17% Similarity=0.264 Sum_probs=65.9
Q ss_pred EEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC---chhHHHHhhcccCCCeEEEEe-C---CCChhhhc-------CC
Q 017551 23 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-G---QPQLENAL-------TG 88 (369)
Q Consensus 23 I~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~---~~g~~~dL~~~~~~~~v~~~~-~---t~dl~~al-------~~ 88 (369)
|.|+|++|++|+.++..|..++. ++++.+.+. ......++.+.. .++.... . ..++.+++ ..
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 76 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGA--KVIITYRSSEEGAEEVVEELKAYG--VKALGVVCDVSDREDVKAVVEEIEEELGP 76 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCchhHHHHHHHHHHhcC--CceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 46999999999999999999887 899998764 122233333221 1222211 1 12222333 34
Q ss_pred CcEEEEcCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHHHhhhC---CCeEEEEecCC
Q 017551 89 MDLVIIPAGVPRK-P--GMT---RDDLFNINAGIVRTLCEGIAKCC---PNATVNLISNP 139 (369)
Q Consensus 89 ADiVii~ag~p~k-~--g~~---r~~~~~~N~~i~~~i~~~i~~~~---p~a~viv~tNP 139 (369)
.|+||..+|.... + +.+ ....+..|......+.+.+..+. ....++++|-.
T Consensus 77 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~ 136 (239)
T TIGR01830 77 IDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSV 136 (239)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCc
Confidence 6999999886421 1 111 23456677776666766665542 23456666543
No 335
>PRK06101 short chain dehydrogenase; Provisional
Probab=95.88 E-value=0.11 Score=47.90 Aligned_cols=114 Identities=22% Similarity=0.199 Sum_probs=64.9
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCC-CeEEEE-eCCCChhhhcCC----CcEEEE
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTG-AVVRGF-LGQPQLENALTG----MDLVII 94 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~-~~v~~~-~~t~dl~~al~~----ADiVii 94 (369)
.++.|+||+|++|..++..|+.+|. +|++.|.+.... ..+...... ..+... +...+++++++. .|.+|+
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~--~V~~~~r~~~~~--~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~ 77 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGW--QVIACGRNQSVL--DELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIF 77 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCC--EEEEEECCHHHH--HHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEE
Confidence 4789999999999999999998887 899999875211 111111100 111111 111233333333 477888
Q ss_pred cCCCCCC-C-C-CCH---HHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecC
Q 017551 95 PAGVPRK-P-G-MTR---DDLFNINAGIVRTLCEGIAKCC-PNATVNLISN 138 (369)
Q Consensus 95 ~ag~p~k-~-g-~~r---~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tN 138 (369)
.+|.... + . .+. ...+..|......+.+.+..+- ....++++|.
T Consensus 78 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS 128 (240)
T PRK06101 78 NAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGS 128 (240)
T ss_pred cCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEec
Confidence 7774321 1 1 222 3456777777777777666542 3345555543
No 336
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=95.88 E-value=0.095 Score=48.80 Aligned_cols=116 Identities=19% Similarity=0.227 Sum_probs=65.2
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC-chhHHHHhhcccCCCeEEEEe-CCCC---hhhhcC------
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFL-GQPQ---LENALT------ 87 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~-~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al~------ 87 (369)
+.++|.|+||+|++|..++..|+..+. .+++++.+. .......+... ...+..+. ..++ ..+.++
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~--~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~ 89 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGA--DIIITTHGTNWDETRRLIEKE--GRKVTFVQVDLTKPESAEKVVKEALEEF 89 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCcHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 456999999999999999999999887 889998874 22222222221 12222221 1122 222232
Q ss_pred -CCcEEEEcCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHHHhhhC---CCeEEEEecC
Q 017551 88 -GMDLVIIPAGVPRK-P--GMT---RDDLFNINAGIVRTLCEGIAKCC---PNATVNLISN 138 (369)
Q Consensus 88 -~ADiVii~ag~p~k-~--g~~---r~~~~~~N~~i~~~i~~~i~~~~---p~a~viv~tN 138 (369)
..|++|..+|.... + ..+ ....+..|+.-...+.+.+..+. ..+.++++|.
T Consensus 90 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS 150 (258)
T PRK06935 90 GKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIAS 150 (258)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECC
Confidence 67999999886431 1 122 23345556555444444433321 2355666654
No 337
>PRK12742 oxidoreductase; Provisional
Probab=95.87 E-value=0.066 Score=48.90 Aligned_cols=113 Identities=18% Similarity=0.236 Sum_probs=60.2
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCCh---hhh---cCCCcEEE
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQL---ENA---LTGMDLVI 93 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl---~~a---l~~ADiVi 93 (369)
.++|.|+||+|+||+.++..|+..+. ++++.+..... ...++.... ...... ...+|. .+. +...|++|
T Consensus 6 ~k~vlItGasggIG~~~a~~l~~~G~--~v~~~~~~~~~-~~~~l~~~~-~~~~~~-~D~~~~~~~~~~~~~~~~id~li 80 (237)
T PRK12742 6 GKKVLVLGGSRGIGAAIVRRFVTDGA--NVRFTYAGSKD-AAERLAQET-GATAVQ-TDSADRDAVIDVVRKSGALDILV 80 (237)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC--EEEEecCCCHH-HHHHHHHHh-CCeEEe-cCCCCHHHHHHHHHHhCCCcEEE
Confidence 45899999999999999999999887 78877654311 111121110 111110 111221 122 34579999
Q ss_pred EcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhh-CCCeEEEEec
Q 017551 94 IPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKC-CPNATVNLIS 137 (369)
Q Consensus 94 i~ag~p~k~---g~~---r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~t 137 (369)
..+|..... ..+ -...+..|+.-...++..+... .+.+.+++++
T Consensus 81 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 131 (237)
T PRK12742 81 VNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIG 131 (237)
T ss_pred ECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEe
Confidence 999864321 112 2334555655444444333332 2345566554
No 338
>PRK07060 short chain dehydrogenase; Provisional
Probab=95.86 E-value=0.029 Score=51.49 Aligned_cols=115 Identities=18% Similarity=0.177 Sum_probs=65.2
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEE-eCCCChhhhc---CCCcEEEE
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGF-LGQPQLENAL---TGMDLVII 94 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~-~~t~dl~~al---~~ADiVii 94 (369)
+.+++.|+||+|++|+.++..++..+. +|++++.+.... .++.+......+... +...++.+++ ...|+||.
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~--~V~~~~r~~~~~--~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~ 83 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGA--RVVAAARNAAAL--DRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVN 83 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCC--EEEEEeCCHHHH--HHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEE
Confidence 346899999999999999999999887 899999875211 112111100111111 1111222333 35799999
Q ss_pred cCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHhhh----CCCeEEEEec
Q 017551 95 PAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKC----CPNATVNLIS 137 (369)
Q Consensus 95 ~ag~p~k~---g~~r---~~~~~~N~~i~~~i~~~i~~~----~p~a~viv~t 137 (369)
.+|..... ..+. ...+..|+.-...+.+.+.+. +..+.++++|
T Consensus 84 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~s 136 (245)
T PRK07060 84 CAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVS 136 (245)
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEc
Confidence 98864321 1222 233456666555555555443 2235566665
No 339
>PRK07035 short chain dehydrogenase; Provisional
Probab=95.86 E-value=0.07 Score=49.35 Aligned_cols=114 Identities=13% Similarity=0.126 Sum_probs=64.3
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCCh---hhh-------c
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL---ENA-------L 86 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~dl---~~a-------l 86 (369)
.++|.|+||+|++|..++..|...+. .|+++|.+. ......++.+.. ..+..+. .-++. +++ +
T Consensus 8 ~k~vlItGas~gIG~~l~~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (252)
T PRK07035 8 GKIALVTGASRGIGEAIAKLLAQQGA--HVIVSSRKLDGCQAVADAIVAAG--GKAEALACHIGEMEQIDALFAHIRERH 83 (252)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 35899999999999999999999887 899999875 223333343221 1222111 11222 122 2
Q ss_pred CCCcEEEEcCCC-C-CCC--CCCH---HHHHHHHHHHHHHHHHHHhhh---CCCeEEEEec
Q 017551 87 TGMDLVIIPAGV-P-RKP--GMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLIS 137 (369)
Q Consensus 87 ~~ADiVii~ag~-p-~k~--g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~t 137 (369)
...|++|..+|. + ..+ ..+. ...+..|......+.+.+.++ ...+.+++++
T Consensus 84 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~s 144 (252)
T PRK07035 84 GRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVA 144 (252)
T ss_pred CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEEC
Confidence 357999998874 2 111 2222 234556655544444444332 2235566665
No 340
>PRK06114 short chain dehydrogenase; Provisional
Probab=95.84 E-value=0.1 Score=48.48 Aligned_cols=113 Identities=19% Similarity=0.254 Sum_probs=63.9
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc---hhHHHHhhcccCCCeEEEEe-CCCC---hhhhc------
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMDTGAVVRGFL-GQPQ---LENAL------ 86 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~---~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al------ 86 (369)
.+.+.|+||+|++|+.++..|++.+. ++++.|.+.. .....++.+.. .++..+. .-+| ..+++
T Consensus 8 ~k~~lVtG~s~gIG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~ 83 (254)
T PRK06114 8 GQVAFVTGAGSGIGQRIAIGLAQAGA--DVALFDLRTDDGLAETAEHIEAAG--RRAIQIAADVTSKADLRAAVARTEAE 83 (254)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 45899999999999999999999987 8999998652 22233343321 1222221 1122 22222
Q ss_pred -CCCcEEEEcCCCCCCCC---CCH---HHHHHHHHHHH----HHHHHHHhhhCCCeEEEEec
Q 017551 87 -TGMDLVIIPAGVPRKPG---MTR---DDLFNINAGIV----RTLCEGIAKCCPNATVNLIS 137 (369)
Q Consensus 87 -~~ADiVii~ag~p~k~g---~~r---~~~~~~N~~i~----~~i~~~i~~~~p~a~viv~t 137 (369)
..-|++|..+|...... .+. ...+..|+... +.+.+.+.+. ..+.++++|
T Consensus 84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~is 144 (254)
T PRK06114 84 LGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLEN-GGGSIVNIA 144 (254)
T ss_pred cCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhc-CCcEEEEEC
Confidence 34599999998743211 122 23345565444 3444444332 334566654
No 341
>PRK07825 short chain dehydrogenase; Provisional
Probab=95.84 E-value=0.054 Score=50.89 Aligned_cols=113 Identities=18% Similarity=0.131 Sum_probs=64.2
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEE-eCCCCh-------hhhcCCC
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGF-LGQPQL-------ENALTGM 89 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~-~~t~dl-------~~al~~A 89 (369)
.++|.|+||+|++|..++..|+..+. .|++.+.+.. .....++.... -+... +..+++ .+.+.+.
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~---~~~~D~~~~~~~~~~~~~~~~~~~~i 79 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGA--RVAIGDLDEALAKETAAELGLVV---GGPLDVTDPASFAAFLDAVEADLGPI 79 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHhccce---EEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 46899999999999999999999887 8999998752 22222222110 01110 001111 1223578
Q ss_pred cEEEEcCCCCCCC---CCC---HHHHHHHHHH----HHHHHHHHHhhhCCCeEEEEecC
Q 017551 90 DLVIIPAGVPRKP---GMT---RDDLFNINAG----IVRTLCEGIAKCCPNATVNLISN 138 (369)
Q Consensus 90 DiVii~ag~p~k~---g~~---r~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tN 138 (369)
|++|..+|..... ..+ -...+..|+. +.+.+.+.+.+. ..+.|+++|-
T Consensus 80 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~g~iv~isS 137 (273)
T PRK07825 80 DVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPR-GRGHVVNVAS 137 (273)
T ss_pred CEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCEEEEEcC
Confidence 9999999864321 112 2334556654 344444444433 3456666653
No 342
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=95.84 E-value=0.0074 Score=60.32 Aligned_cols=71 Identities=25% Similarity=0.349 Sum_probs=45.6
Q ss_pred EEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch--hHHHHhhcccCCCeEEEEe----CCCChhhhcCCCcEEEEcC
Q 017551 23 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFL----GQPQLENALTGMDLVIIPA 96 (369)
Q Consensus 23 I~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~--g~~~dL~~~~~~~~v~~~~----~t~dl~~al~~ADiVii~a 96 (369)
|.|+|| |.+|+.++..|++.+...+|++.|.+..+ ..+..+ . ..++.... ...++.+.++++|+||.++
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~-~---~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~ 75 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL-L---GDRVEAVQVDVNDPESLAELLRGCDVVINCA 75 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT---T---TTTEEEEE--TTTHHHHHHHHTTSSEEEE-S
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc-c---ccceeEEEEecCCHHHHHHHHhcCCEEEECC
Confidence 789999 99999999999998866699999998632 222222 1 12222211 1223667889999999997
Q ss_pred CC
Q 017551 97 GV 98 (369)
Q Consensus 97 g~ 98 (369)
|.
T Consensus 76 gp 77 (386)
T PF03435_consen 76 GP 77 (386)
T ss_dssp SG
T ss_pred cc
Confidence 54
No 343
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=95.83 E-value=0.057 Score=53.41 Aligned_cols=35 Identities=23% Similarity=0.291 Sum_probs=31.2
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 56 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~ 56 (369)
..||.|+|+ |++|+.++..|+..|. .+|.|+|.+.
T Consensus 24 ~~~VlVvG~-GglGs~va~~La~aGv-g~i~lvD~D~ 58 (339)
T PRK07688 24 EKHVLIIGA-GALGTANAEMLVRAGV-GKVTIVDRDY 58 (339)
T ss_pred CCcEEEECC-CHHHHHHHHHHHHcCC-CeEEEEeCCc
Confidence 359999999 9999999999999885 5999999874
No 344
>PRK07062 short chain dehydrogenase; Provisional
Probab=95.83 E-value=0.27 Score=45.85 Aligned_cols=116 Identities=16% Similarity=0.180 Sum_probs=66.0
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCChh----------hhc
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQLE----------NAL 86 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~dl~----------~al 86 (369)
.+.+.|+||+|++|..++..|+..+. +|++.+.+. ......++.......++..+. .-+|.+ +.+
T Consensus 8 ~k~~lItGas~giG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 85 (265)
T PRK07062 8 GRVAVVTGGSSGIGLATVELLLEAGA--SVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARF 85 (265)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhc
Confidence 45899999999999999999999987 899999876 222233333221112332221 122321 123
Q ss_pred CCCcEEEEcCCCCCCC---CCCH---HHHHHHH----HHHHHHHHHHHhhhCCCeEEEEecC
Q 017551 87 TGMDLVIIPAGVPRKP---GMTR---DDLFNIN----AGIVRTLCEGIAKCCPNATVNLISN 138 (369)
Q Consensus 87 ~~ADiVii~ag~p~k~---g~~r---~~~~~~N----~~i~~~i~~~i~~~~p~a~viv~tN 138 (369)
...|++|..+|..... ..+. ...+..| ....+.+.+.+.+. ..+.|+++|-
T Consensus 86 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~isS 146 (265)
T PRK07062 86 GGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRAS-AAASIVCVNS 146 (265)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcc-CCcEEEEecc
Confidence 4679999999864321 1121 2223334 33455555555543 3455666653
No 345
>PRK07677 short chain dehydrogenase; Provisional
Probab=95.83 E-value=0.27 Score=45.50 Aligned_cols=113 Identities=12% Similarity=0.105 Sum_probs=65.8
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCC---hhhh-------cC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENA-------LT 87 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~a-------l~ 87 (369)
+.+.|+||+|++|..++..|+..+. .|++.|.+. ......++.... ..+..+. .-+| .+++ +.
T Consensus 2 k~~lItG~s~giG~~ia~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 77 (252)
T PRK07677 2 KVVIITGGSSGMGKAMAKRFAEEGA--NVVITGRTKEKLEEAKLEIEQFP--GQVLTVQMDVRNPEDVQKMVEQIDEKFG 77 (252)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 4789999999999999999999887 899999876 222333333211 2233221 1122 2121 24
Q ss_pred CCcEEEEcCCCCCC-C--CCCH---HHHHHHHHHHHHHHHHHH----hhhCCCeEEEEec
Q 017551 88 GMDLVIIPAGVPRK-P--GMTR---DDLFNINAGIVRTLCEGI----AKCCPNATVNLIS 137 (369)
Q Consensus 88 ~ADiVii~ag~p~k-~--g~~r---~~~~~~N~~i~~~i~~~i----~~~~p~a~viv~t 137 (369)
..|+||..+|.... + ..+. ...+..|+.....+.+.+ .+....+.++++|
T Consensus 78 ~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~is 137 (252)
T PRK07677 78 RIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMV 137 (252)
T ss_pred CccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEc
Confidence 67999999875321 1 2232 334556655444444444 3333456677766
No 346
>PRK08339 short chain dehydrogenase; Provisional
Probab=95.82 E-value=0.32 Score=45.70 Aligned_cols=114 Identities=13% Similarity=0.136 Sum_probs=67.2
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-C---CCChhhhc------CC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-G---QPQLENAL------TG 88 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~---t~dl~~al------~~ 88 (369)
+.+.|+||+|++|..++..|+..|. +|+++|.+. +.....++.... ..++..+. . ..+.++.+ ..
T Consensus 9 k~~lItGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~ 85 (263)
T PRK08339 9 KLAFTTASSKGIGFGVARVLARAGA--DVILLSRNEENLKKAREKIKSES-NVDVSYIVADLTKREDLERTVKELKNIGE 85 (263)
T ss_pred CEEEEeCCCCcHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhc-CCceEEEEecCCCHHHHHHHHHHHHhhCC
Confidence 4789999999999999999999987 899999875 222233333211 12222221 1 11222222 35
Q ss_pred CcEEEEcCCCCCCC---CCCH---HHHHHHH----HHHHHHHHHHHhhhCCCeEEEEecC
Q 017551 89 MDLVIIPAGVPRKP---GMTR---DDLFNIN----AGIVRTLCEGIAKCCPNATVNLISN 138 (369)
Q Consensus 89 ADiVii~ag~p~k~---g~~r---~~~~~~N----~~i~~~i~~~i~~~~p~a~viv~tN 138 (369)
.|++|..+|.+... ..+. ...+..| ..+.+.+.+.+.+.. .+.||++|-
T Consensus 86 iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~-~g~Ii~isS 144 (263)
T PRK08339 86 PDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKG-FGRIIYSTS 144 (263)
T ss_pred CcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEcC
Confidence 79999999875421 1222 2334444 445666666665443 456666654
No 347
>PRK05872 short chain dehydrogenase; Provisional
Probab=95.81 E-value=0.29 Score=46.89 Aligned_cols=114 Identities=22% Similarity=0.268 Sum_probs=65.9
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEE-eCCCCh---hh-------hc
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGF-LGQPQL---EN-------AL 86 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~-~~t~dl---~~-------al 86 (369)
.++|.|+||+|++|..++..|+..|. +|++.+.+.. .....++.. ...+..+ ..-+|. ++ .+
T Consensus 9 gk~vlItGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~l~~~~~~l~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 83 (296)
T PRK05872 9 GKVVVVTGAARGIGAELARRLHARGA--KLALVDLEEAELAALAAELGG---DDRVLTVVADVTDLAAMQAAAEEAVERF 83 (296)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhcC---CCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 46899999999999999999999987 8999998762 222333322 1122211 111222 11 23
Q ss_pred CCCcEEEEcCCCCCC-C--CCCH---HHHHHHHHHHHHHHHHHHhhhC--CCeEEEEecC
Q 017551 87 TGMDLVIIPAGVPRK-P--GMTR---DDLFNINAGIVRTLCEGIAKCC--PNATVNLISN 138 (369)
Q Consensus 87 ~~ADiVii~ag~p~k-~--g~~r---~~~~~~N~~i~~~i~~~i~~~~--p~a~viv~tN 138 (369)
...|+||..+|.... + ..+. ...+..|+.-...+.+.+..+. ..+.++++|.
T Consensus 84 g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS 143 (296)
T PRK05872 84 GGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSS 143 (296)
T ss_pred CCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeC
Confidence 568999999986431 1 1222 3345566555555444443321 2455666653
No 348
>PRK06139 short chain dehydrogenase; Provisional
Probab=95.78 E-value=0.1 Score=51.23 Aligned_cols=113 Identities=19% Similarity=0.099 Sum_probs=64.9
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCC---hhhh-------c
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENA-------L 86 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~a-------l 86 (369)
.+.|.|+||+|++|..++..|+..+. +|++++.+. +.....++... ..++.... .-+| .+++ +
T Consensus 7 ~k~vlITGAs~GIG~aia~~la~~G~--~Vvl~~R~~~~l~~~~~~~~~~--g~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 82 (330)
T PRK06139 7 GAVVVITGASSGIGQATAEAFARRGA--RLVLAARDEEALQAVAEECRAL--GAEVLVVPTDVTDADQVKALATQAASFG 82 (330)
T ss_pred CCEEEEcCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHHHhc
Confidence 46899999999999999999999987 899999876 22233333322 12222111 1122 2222 2
Q ss_pred CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHH----HHHHHHHhhhCCCeEEEEec
Q 017551 87 TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIV----RTLCEGIAKCCPNATVNLIS 137 (369)
Q Consensus 87 ~~ADiVii~ag~p~k~---g~~---r~~~~~~N~~i~----~~i~~~i~~~~p~a~viv~t 137 (369)
...|++|..+|..... ..+ ....+..|.--. +.+.+.+.+.. .+.+|+++
T Consensus 83 g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~-~g~iV~is 142 (330)
T PRK06139 83 GRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQG-HGIFINMI 142 (330)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcC-CCEEEEEc
Confidence 4679999999864321 112 223455554433 33444444332 45566554
No 349
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.78 E-value=0.029 Score=54.47 Aligned_cols=57 Identities=18% Similarity=0.335 Sum_probs=47.5
Q ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551 18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 97 (369)
Q Consensus 18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag 97 (369)
-+.++|+|||.+|.||.+++..|...+. .|.+++... .++.+..+.||+||...|
T Consensus 157 l~Gk~V~vIG~s~ivG~PmA~~L~~~ga--tVtv~~~~t-----------------------~~l~e~~~~ADIVIsavg 211 (301)
T PRK14194 157 LTGKHAVVIGRSNIVGKPMAALLLQAHC--SVTVVHSRS-----------------------TDAKALCRQADIVVAAVG 211 (301)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHCCC--EEEEECCCC-----------------------CCHHHHHhcCCEEEEecC
Confidence 3467999999977999999999999887 888887541 246788899999999987
Q ss_pred CC
Q 017551 98 VP 99 (369)
Q Consensus 98 ~p 99 (369)
.|
T Consensus 212 ~~ 213 (301)
T PRK14194 212 RP 213 (301)
T ss_pred Ch
Confidence 66
No 350
>PRK05854 short chain dehydrogenase; Provisional
Probab=95.77 E-value=0.16 Score=49.22 Aligned_cols=115 Identities=22% Similarity=0.141 Sum_probs=65.5
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCChh----------hh
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQLE----------NA 85 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~dl~----------~a 85 (369)
+.+++.|+||+|+||..++..|+..+. +|++.+.+.. .....++........+..+. .-+|+. +.
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~--~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~ 90 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGA--EVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAE 90 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHh
Confidence 356899999999999999999999887 9999998762 22233343221112233221 112221 12
Q ss_pred cCCCcEEEEcCCCCCCC--CCC---HHHHHHHHHH----HHHHHHHHHhhhCCCeEEEEec
Q 017551 86 LTGMDLVIIPAGVPRKP--GMT---RDDLFNINAG----IVRTLCEGIAKCCPNATVNLIS 137 (369)
Q Consensus 86 l~~ADiVii~ag~p~k~--g~~---r~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~t 137 (369)
....|++|..||....+ ..+ ....+..|.- +.+.+.+.+.+. .+.|+++|
T Consensus 91 ~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~--~~riv~vs 149 (313)
T PRK05854 91 GRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG--RARVTSQS 149 (313)
T ss_pred CCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC--CCCeEEEe
Confidence 24589999999864322 111 2233455543 344555555432 34555554
No 351
>KOG2666 consensus UDP-glucose/GDP-mannose dehydrogenase [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=95.77 E-value=0.044 Score=53.15 Aligned_cols=77 Identities=22% Similarity=0.371 Sum_probs=50.4
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch--hHHH-----------HhhcccCCCeEEEEeCCCChhhhcC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTA-----------DISHMDTGAVVRGFLGQPQLENALT 87 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~--g~~~-----------dL~~~~~~~~v~~~~~t~dl~~al~ 87 (369)
+||+-||| |+||-+....++.+=+-.++.++|++... +.-- |......+.++ +| ++|.+.+++
T Consensus 2 ~kicciga-gyvggptcavia~kcp~i~vtvvd~s~~ri~~wnsd~lpiyepgldevv~~crgknl-ff--stdiekai~ 77 (481)
T KOG2666|consen 2 VKICCIGA-GYVGGPTCAVIALKCPDIEVTVVDISVPRINAWNSDKLPIYEPGLDEVVKQCRGKNL-FF--STDIEKAIK 77 (481)
T ss_pred ceEEEecC-cccCCcchheeeecCCceEEEEEecCchHhhcccCCCCcccCCCHHHHHHHhcCCce-ee--ecchHHHhh
Confidence 59999999 99988776655554223399999998621 1100 11111112222 33 468899999
Q ss_pred CCcEEEEcCCCCCC
Q 017551 88 GMDLVIIPAGVPRK 101 (369)
Q Consensus 88 ~ADiVii~ag~p~k 101 (369)
.||+|++....|.|
T Consensus 78 eadlvfisvntptk 91 (481)
T KOG2666|consen 78 EADLVFISVNTPTK 91 (481)
T ss_pred hcceEEEEecCCcc
Confidence 99999998877765
No 352
>PRK08223 hypothetical protein; Validated
Probab=95.77 E-value=0.046 Score=52.74 Aligned_cols=35 Identities=23% Similarity=0.296 Sum_probs=31.3
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 56 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~ 56 (369)
..||.|+|+ |.+|+.++..|+..|. .+|.|+|-|.
T Consensus 27 ~s~VlIvG~-GGLGs~va~~LA~aGV-G~i~lvD~D~ 61 (287)
T PRK08223 27 NSRVAIAGL-GGVGGIHLLTLARLGI-GKFTIADFDV 61 (287)
T ss_pred cCCEEEECC-CHHHHHHHHHHHHhCC-CeEEEEeCCC
Confidence 359999999 9999999999999985 5899999885
No 353
>PLN02350 phosphogluconate dehydrogenase (decarboxylating)
Probab=95.74 E-value=0.039 Score=57.24 Aligned_cols=98 Identities=16% Similarity=0.169 Sum_probs=60.0
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcc-cC-C-CeEEEEeCCCChhhhcC---CCcEE
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHM-DT-G-AVVRGFLGQPQLENALT---GMDLV 92 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~-~~-~-~~v~~~~~t~dl~~al~---~ADiV 92 (369)
...+|++||- |.||++++..|+.+|. +|+.||++..+. .++.+. .. . ..+.. ..+++++.+ .+|+|
T Consensus 5 ~~~~IG~IGL-G~MG~~mA~nL~~~G~--~V~V~NRt~~k~--~~l~~~~~~~Ga~~~~~---a~s~~e~v~~l~~~dvI 76 (493)
T PLN02350 5 ALSRIGLAGL-AVMGQNLALNIAEKGF--PISVYNRTTSKV--DETVERAKKEGNLPLYG---FKDPEDFVLSIQKPRSV 76 (493)
T ss_pred CCCCEEEEee-HHHHHHHHHHHHhCCC--eEEEECCCHHHH--HHHHHhhhhcCCccccc---CCCHHHHHhcCCCCCEE
Confidence 4568999999 9999999999999998 999999875322 222221 00 1 11121 234555554 49999
Q ss_pred EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhh-CCCeEEEEecCC
Q 017551 93 IIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKC-CPNATVNLISNP 139 (369)
Q Consensus 93 ii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tNP 139 (369)
|+...- -+.+.++...+... .|..++|..||-
T Consensus 77 i~~v~~---------------~~aV~~Vi~gl~~~l~~G~iiID~sT~ 109 (493)
T PLN02350 77 IILVKA---------------GAPVDQTIKALSEYMEPGDCIIDGGNE 109 (493)
T ss_pred EEECCC---------------cHHHHHHHHHHHhhcCCCCEEEECCCC
Confidence 997311 12233333333333 467777777654
No 354
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=95.73 E-value=0.065 Score=50.38 Aligned_cols=35 Identities=26% Similarity=0.411 Sum_probs=31.2
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 56 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~ 56 (369)
..||+|+|+ |.+|+.++..|+..|. .+|.|+|.+.
T Consensus 24 ~~~VlvvG~-GglGs~va~~La~~Gv-g~i~lvD~D~ 58 (240)
T TIGR02355 24 ASRVLIVGL-GGLGCAASQYLAAAGV-GNLTLLDFDT 58 (240)
T ss_pred CCcEEEECc-CHHHHHHHHHHHHcCC-CEEEEEeCCc
Confidence 359999999 9999999999999884 5999999885
No 355
>PLN00016 RNA-binding protein; Provisional
Probab=95.73 E-value=0.065 Score=53.34 Aligned_cols=37 Identities=24% Similarity=0.137 Sum_probs=32.8
Q ss_pred CCCCEEEEE----cCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551 18 AAGFKVAIL----GAAGGIGQPLAMLMKINPLVSVLHLYDVVN 56 (369)
Q Consensus 18 ~~~~KI~Ii----GA~G~vGs~la~~l~~~~~~~el~L~D~~~ 56 (369)
..++||.|+ ||+|++|+.++..|...++ +|++++.+.
T Consensus 50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~--~V~~l~R~~ 90 (378)
T PLN00016 50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAGH--EVTLFTRGK 90 (378)
T ss_pred cccceEEEEeccCCCceeEhHHHHHHHHHCCC--EEEEEecCC
Confidence 335799999 9999999999999999987 999999875
No 356
>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional
Probab=95.72 E-value=0.023 Score=56.34 Aligned_cols=74 Identities=23% Similarity=0.447 Sum_probs=49.2
Q ss_pred CCCCCEEEEEcCCCccHHHHHHHHHhCCC--CcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEE
Q 017551 17 GAAGFKVAILGAAGGIGQPLAMLMKINPL--VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVII 94 (369)
Q Consensus 17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~--~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii 94 (369)
..+.+||+|+||+|.+|+.+..+|..++. +.+|.++......|....+.. ..+.+.. .|. ++++++|+|+.
T Consensus 2 ~~~~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~saGk~~~~~~----~~l~v~~--~~~-~~~~~~Divf~ 74 (347)
T PRK06728 2 SEKGYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSKRSAGKTVQFKG----REIIIQE--AKI-NSFEGVDIAFF 74 (347)
T ss_pred CCCCCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECcccCCCCeeeCC----cceEEEe--CCH-HHhcCCCEEEE
Confidence 34568999999999999999999986553 456888876653333332221 2333321 233 46789999999
Q ss_pred cCC
Q 017551 95 PAG 97 (369)
Q Consensus 95 ~ag 97 (369)
+++
T Consensus 75 a~~ 77 (347)
T PRK06728 75 SAG 77 (347)
T ss_pred CCC
Confidence 753
No 357
>COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only]
Probab=95.72 E-value=0.076 Score=49.28 Aligned_cols=95 Identities=21% Similarity=0.277 Sum_probs=65.6
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCC-CCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCCC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINP-LVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP 99 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~-~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~p 99 (369)
+||.+||. |.||..+.-.+...+ .+.-+.+||.+..+... +...-..+. .+++.+.+.+.|+||.+|+
T Consensus 1 l~vgiVGc-GaIG~~l~e~v~~~~~~~e~v~v~D~~~ek~~~--~~~~~~~~~------~s~ide~~~~~DlvVEaAS-- 69 (255)
T COG1712 1 LKVGIVGC-GAIGKFLLELVRDGRVDFELVAVYDRDEEKAKE--LEASVGRRC------VSDIDELIAEVDLVVEAAS-- 69 (255)
T ss_pred CeEEEEec-cHHHHHHHHHHhcCCcceeEEEEecCCHHHHHH--HHhhcCCCc------cccHHHHhhccceeeeeCC--
Confidence 58999999 999999998888774 45678899987633221 222111111 2456666799999999983
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCC
Q 017551 100 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV 140 (369)
Q Consensus 100 ~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv 140 (369)
.+-+++++.++=+.+.|.+|+-++-=+
T Consensus 70 --------------~~Av~e~~~~~L~~g~d~iV~SVGALa 96 (255)
T COG1712 70 --------------PEAVREYVPKILKAGIDVIVMSVGALA 96 (255)
T ss_pred --------------HHHHHHHhHHHHhcCCCEEEEechhcc
Confidence 456788888888888788666554333
No 358
>PRK08324 short chain dehydrogenase; Validated
Probab=95.71 E-value=0.086 Score=56.90 Aligned_cols=113 Identities=20% Similarity=0.266 Sum_probs=64.6
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhhc-------
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENAL------- 86 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al------- 86 (369)
.++|.|+||+|++|+.++..|+..+. +|+++|.+.. ......+... ..+..+. .-+| ..+++
T Consensus 422 gk~vLVTGasggIG~~la~~L~~~Ga--~Vvl~~r~~~~~~~~~~~l~~~---~~v~~v~~Dvtd~~~v~~~~~~~~~~~ 496 (681)
T PRK08324 422 GKVALVTGAAGGIGKATAKRLAAEGA--CVVLADLDEEAAEAAAAELGGP---DRALGVACDVTDEAAVQAAFEEAALAF 496 (681)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCcC--EEEEEeCCHHHHHHHHHHHhcc---CcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 36899999999999999999998887 8999999862 2222223221 1222111 1122 22223
Q ss_pred CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHH----HHHHhhhCCCeEEEEec
Q 017551 87 TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTL----CEGIAKCCPNATVNLIS 137 (369)
Q Consensus 87 ~~ADiVii~ag~p~k~---g~~r---~~~~~~N~~i~~~i----~~~i~~~~p~a~viv~t 137 (369)
.+.|+||..+|..... ..+. ...+..|......+ .+.+++....+.+++++
T Consensus 497 g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vs 557 (681)
T PRK08324 497 GGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIA 557 (681)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEEC
Confidence 3789999999864321 1222 22344554444444 44444433335566554
No 359
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.71 E-value=0.15 Score=47.18 Aligned_cols=34 Identities=21% Similarity=0.232 Sum_probs=30.4
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 56 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~ 56 (369)
++|.|+||+|++|+.++..|+..+. +++++|...
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~g~--~vi~~~r~~ 36 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAAGF--DLAINDRPD 36 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC--EEEEEecCc
Confidence 4789999999999999999999987 899999754
No 360
>PRK07577 short chain dehydrogenase; Provisional
Probab=95.70 E-value=0.051 Score=49.54 Aligned_cols=35 Identities=20% Similarity=0.134 Sum_probs=31.4
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 56 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~ 56 (369)
.++|.|+||+|++|+.++..|+..+. ++++++.+.
T Consensus 3 ~k~vlItG~s~~iG~~ia~~l~~~G~--~v~~~~r~~ 37 (234)
T PRK07577 3 SRTVLVTGATKGIGLALSLRLANLGH--QVIGIARSA 37 (234)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCC--EEEEEeCCc
Confidence 35899999999999999999999887 899999875
No 361
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.69 E-value=0.16 Score=47.24 Aligned_cols=113 Identities=14% Similarity=0.180 Sum_probs=63.2
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEE-eCCCChhhh-------cCCCcE
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGF-LGQPQLENA-------LTGMDL 91 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~-~~t~dl~~a-------l~~ADi 91 (369)
.+++.|+||+|++|..++..|...+. ++++.+.+.. ....++.+... ..+... +...++.++ +...|+
T Consensus 7 ~k~~lItGas~gIG~~~a~~l~~~G~--~v~~~~~~~~-~~~~~l~~~~~-~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 82 (255)
T PRK06463 7 GKVALITGGTRGIGRAIAEAFLREGA--KVAVLYNSAE-NEAKELREKGV-FTIKCDVGNRDQVKKSKEVVEKEFGRVDV 82 (255)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCcH-HHHHHHHhCCC-eEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 46899999999999999999999887 7888765431 11122222110 011111 111122222 246799
Q ss_pred EEEcCCCCCC-C--CCCH---HHHHHHHHHH----HHHHHHHHhhhCCCeEEEEec
Q 017551 92 VIIPAGVPRK-P--GMTR---DDLFNINAGI----VRTLCEGIAKCCPNATVNLIS 137 (369)
Q Consensus 92 Vii~ag~p~k-~--g~~r---~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~t 137 (369)
||..+|.... + ..+. ...+..|+.- .+.+.+.+.+. ..+.++++|
T Consensus 83 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~-~~g~iv~is 137 (255)
T PRK06463 83 LVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLS-KNGAIVNIA 137 (255)
T ss_pred EEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc-CCcEEEEEc
Confidence 9999987432 1 1222 2334555544 56666666543 345566665
No 362
>PLN02928 oxidoreductase family protein
Probab=95.69 E-value=0.047 Score=54.18 Aligned_cols=103 Identities=23% Similarity=0.177 Sum_probs=61.6
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHh--hcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADI--SHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 96 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL--~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a 96 (369)
..++|+|||. |.||+.++..+..-|. +|..||..........+ ................++++.++.||+|++..
T Consensus 158 ~gktvGIiG~-G~IG~~vA~~l~afG~--~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~l 234 (347)
T PLN02928 158 FGKTVFILGY-GAIGIELAKRLRPFGV--KLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLCC 234 (347)
T ss_pred CCCEEEEECC-CHHHHHHHHHHhhCCC--EEEEECCCCChhhhhhhccccccccccccccCcccCHHHHHhhCCEEEECC
Confidence 3579999999 9999999999986666 99999986311111111 00000000000001346889999999999984
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551 97 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 137 (369)
Q Consensus 97 g~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 137 (369)
|..+. +-.++. .+.++..-|.+++|+++
T Consensus 235 --Plt~~---------T~~li~--~~~l~~Mk~ga~lINva 262 (347)
T PLN02928 235 --TLTKE---------TAGIVN--DEFLSSMKKGALLVNIA 262 (347)
T ss_pred --CCChH---------hhcccC--HHHHhcCCCCeEEEECC
Confidence 32221 111121 24444455889999987
No 363
>PRK08618 ornithine cyclodeaminase; Validated
Probab=95.69 E-value=0.047 Score=53.55 Aligned_cols=72 Identities=10% Similarity=0.151 Sum_probs=49.6
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 96 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a 96 (369)
..+|+|||+ |.+|...+..+.....+.+|.++|.+.. ...+.++.+. ....+.. .+++++++.+||+|+.+-
T Consensus 127 ~~~v~iiGa-G~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~-~~~~~~~---~~~~~~~~~~aDiVi~aT 200 (325)
T PRK08618 127 AKTLCLIGT-GGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSK-FNTEIYV---VNSADEAIEEADIIVTVT 200 (325)
T ss_pred CcEEEEECC-cHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHh-cCCcEEE---eCCHHHHHhcCCEEEEcc
Confidence 468999999 9999877766654445689999999862 3333444322 1223333 256788999999999874
No 364
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=95.69 E-value=0.27 Score=46.21 Aligned_cols=75 Identities=24% Similarity=0.266 Sum_probs=48.8
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCC---hhhh-------c
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENA-------L 86 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~a-------l 86 (369)
.+++.|+||+|++|+.++..|+..+. +|+++|.+. ......++.+. ..++..+. ..+| ...+ +
T Consensus 10 ~k~vlVtGas~giG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 85 (278)
T PRK08277 10 GKVAVITGGGGVLGGAMAKELARAGA--KVAILDRNQEKAEAVVAEIKAA--GGEALAVKADVLDKESLEQARQQILEDF 85 (278)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 46899999999999999999999887 899999875 22233333321 12222221 1122 1112 2
Q ss_pred CCCcEEEEcCCC
Q 017551 87 TGMDLVIIPAGV 98 (369)
Q Consensus 87 ~~ADiVii~ag~ 98 (369)
...|++|..+|.
T Consensus 86 g~id~li~~ag~ 97 (278)
T PRK08277 86 GPCDILINGAGG 97 (278)
T ss_pred CCCCEEEECCCC
Confidence 478999999885
No 365
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=95.69 E-value=0.054 Score=52.09 Aligned_cols=95 Identities=24% Similarity=0.271 Sum_probs=66.9
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcC--CCcEEEEcCCC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALT--GMDLVIIPAGV 98 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~--~ADiVii~ag~ 98 (369)
|||.|+|++|.+|+.|...+. .+. +++-.|..+ +|+.+.+ .+.+.++ .-|+||.+|.+
T Consensus 1 M~iLi~G~~GqLG~~L~~~l~-~~~--~v~a~~~~~-----~Ditd~~------------~v~~~i~~~~PDvVIn~AAy 60 (281)
T COG1091 1 MKILITGANGQLGTELRRALP-GEF--EVIATDRAE-----LDITDPD------------AVLEVIRETRPDVVINAAAY 60 (281)
T ss_pred CcEEEEcCCChHHHHHHHHhC-CCc--eEEeccCcc-----ccccChH------------HHHHHHHhhCCCEEEECccc
Confidence 679999999999999998887 434 677666643 3343322 1234444 55999999987
Q ss_pred CCCC--CCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551 99 PRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 137 (369)
Q Consensus 99 p~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 137 (369)
..-. ..++..-+..|+.....+++..+++ .+++|.+|
T Consensus 61 t~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~--ga~lVhiS 99 (281)
T COG1091 61 TAVDKAESEPELAFAVNATGAENLARAAAEV--GARLVHIS 99 (281)
T ss_pred cccccccCCHHHHHHhHHHHHHHHHHHHHHh--CCeEEEee
Confidence 6533 2446666789999999999999887 45555554
No 366
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=95.68 E-value=0.041 Score=51.43 Aligned_cols=36 Identities=19% Similarity=0.252 Sum_probs=32.1
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 56 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~ 56 (369)
+.+++.|+||+|++|+.++..|+..|. +|+++|.+.
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~--~V~~~~r~~ 40 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGA--RVAVLERSA 40 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCH
Confidence 346899999999999999999999987 899999875
No 367
>PRK06407 ornithine cyclodeaminase; Provisional
Probab=95.67 E-value=0.045 Score=53.20 Aligned_cols=72 Identities=17% Similarity=0.070 Sum_probs=53.0
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEc
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP 95 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ 95 (369)
....++|||+ |..|...+..+..-..+.+|.+||++. +...+.++.+.. ...+... ++.++++++||+|+.+
T Consensus 116 da~~l~iiGa-G~QA~~~~~a~~~v~~i~~v~v~~r~~~~a~~f~~~~~~~~-~~~v~~~---~~~~eav~~aDIV~ta 189 (301)
T PRK06407 116 NVENFTIIGS-GFQAETQLEGMASVYNPKRIRVYSRNFDHARAFAERFSKEF-GVDIRPV---DNAEAALRDADTITSI 189 (301)
T ss_pred CCcEEEEECC-cHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHHhc-CCcEEEe---CCHHHHHhcCCEEEEe
Confidence 4579999999 988887777776666689999999987 344555555421 2345542 4678999999999975
No 368
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=95.67 E-value=0.071 Score=49.55 Aligned_cols=35 Identities=31% Similarity=0.467 Sum_probs=31.0
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 56 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~ 56 (369)
..||+|+|+ |.+|+.++..|+..|. .++.|+|-+.
T Consensus 21 ~~~VlivG~-GglGs~va~~La~~Gv-g~i~lvD~D~ 55 (228)
T cd00757 21 NARVLVVGA-GGLGSPAAEYLAAAGV-GKLGLVDDDV 55 (228)
T ss_pred CCcEEEECC-CHHHHHHHHHHHHcCC-CEEEEEcCCE
Confidence 359999999 9999999999999884 6999999875
No 369
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=95.65 E-value=0.21 Score=45.72 Aligned_cols=114 Identities=20% Similarity=0.169 Sum_probs=64.1
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcc--cCCCeEEEEe-CCCC---hhhhc-------C
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHM--DTGAVVRGFL-GQPQ---LENAL-------T 87 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~--~~~~~v~~~~-~t~d---l~~al-------~ 87 (369)
++|.|+||+|++|+.++..|...+. .+++.|.+.. ....++... ....++.... .-+| ..+++ .
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~--~vi~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~ 79 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGY--RVIATYFSGN-DCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEG 79 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCC--EEEEEeCCcH-HHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4889999999999999999998886 8999998742 111111110 0112333322 1122 22222 3
Q ss_pred CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHH----HHHHhhhCCCeEEEEecC
Q 017551 88 GMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTL----CEGIAKCCPNATVNLISN 138 (369)
Q Consensus 88 ~ADiVii~ag~p~k~---g~~---r~~~~~~N~~i~~~i----~~~i~~~~p~a~viv~tN 138 (369)
..|+||..+|..... ..+ -...+..|+.....+ .+.+.+. +.+.++++|.
T Consensus 80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~iss 139 (245)
T PRK12824 80 PVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQ-GYGRIINISS 139 (245)
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh-CCeEEEEECC
Confidence 589999998864311 112 223445665554444 4444433 4556777764
No 370
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=95.64 E-value=0.048 Score=51.71 Aligned_cols=69 Identities=12% Similarity=0.218 Sum_probs=44.8
Q ss_pred EEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhc------CC-CcEEEE
Q 017551 22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENAL------TG-MDLVII 94 (369)
Q Consensus 22 KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al------~~-ADiVii 94 (369)
||.|+||+|++|+.++..|...+. +|.....+...... .... ..... +...+++.+++ ++ +|.|+.
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~--~V~~~~R~~~~~~~---~~~~-~~~~d-~~d~~~l~~a~~~~~~~~g~~d~v~~ 73 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASV--PFLVASRSSSSSAG---PNEK-HVKFD-WLDEDTWDNPFSSDDGMEPEISAVYL 73 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCC--cEEEEeCCCccccC---CCCc-ccccc-CCCHHHHHHHHhcccCcCCceeEEEE
Confidence 589999999999999999998887 88888887521100 0000 00111 11233455666 67 999998
Q ss_pred cCC
Q 017551 95 PAG 97 (369)
Q Consensus 95 ~ag 97 (369)
.++
T Consensus 74 ~~~ 76 (285)
T TIGR03649 74 VAP 76 (285)
T ss_pred eCC
Confidence 754
No 371
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.64 E-value=0.26 Score=45.33 Aligned_cols=114 Identities=14% Similarity=0.178 Sum_probs=62.3
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEE-eCCCc--hhHHHHhhcccCCCeEEEEeC-CCC---hhhhc-------
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLY-DVVNT--PGVTADISHMDTGAVVRGFLG-QPQ---LENAL------- 86 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~-D~~~~--~g~~~dL~~~~~~~~v~~~~~-t~d---l~~al------- 86 (369)
+++.|+||+|++|+.++..|..++. ++++. +.+.. .....++.... ..+..+.. -+| +..++
T Consensus 5 ~~vlItGa~g~iG~~~a~~l~~~g~--~v~~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (250)
T PRK08063 5 KVALVTGSSRGIGKAIALRLAEEGY--DIAVNYARSRKAAEETAEEIEALG--RKALAVKANVGDVEKIKEMFAQIDEEF 80 (250)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 5899999999999999999999886 76654 44432 22223332221 22332211 122 22223
Q ss_pred CCCcEEEEcCCCCC-CC--CCCHH---HHHHHHHHHHHHHHHHHhhh---CCCeEEEEecC
Q 017551 87 TGMDLVIIPAGVPR-KP--GMTRD---DLFNINAGIVRTLCEGIAKC---CPNATVNLISN 138 (369)
Q Consensus 87 ~~ADiVii~ag~p~-k~--g~~r~---~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN 138 (369)
...|+||..+|... .+ ..+.. ..+..|......+++.+..+ .+.+.++++|.
T Consensus 81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS 141 (250)
T PRK08063 81 GRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSS 141 (250)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcc
Confidence 35899999987532 22 11221 23445655555555555443 23456666654
No 372
>PRK07023 short chain dehydrogenase; Provisional
Probab=95.63 E-value=0.026 Score=52.05 Aligned_cols=35 Identities=14% Similarity=0.191 Sum_probs=31.3
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 56 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~ 56 (369)
.|+|.|+||+|++|..++..|+..+. ++++++.+.
T Consensus 1 ~~~vlItGasggiG~~ia~~l~~~G~--~v~~~~r~~ 35 (243)
T PRK07023 1 AVRAIVTGHSRGLGAALAEQLLQPGI--AVLGVARSR 35 (243)
T ss_pred CceEEEecCCcchHHHHHHHHHhCCC--EEEEEecCc
Confidence 36899999999999999999998887 899999865
No 373
>TIGR00465 ilvC ketol-acid reductoisomerase. This is the second enzyme in the parallel isoleucine-valine biosynthetic pathway
Probab=95.58 E-value=0.079 Score=51.88 Aligned_cols=65 Identities=20% Similarity=0.183 Sum_probs=43.8
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 96 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a 96 (369)
.+||+|||+ |.+|++++..|...+. +++.++....... ..+... .+.. . +..+++++||+|+++.
T Consensus 3 ~kkIgiIG~-G~mG~AiA~~L~~sG~--~Viv~~~~~~~~~-~~a~~~----Gv~~---~-s~~ea~~~ADiVvLaV 67 (314)
T TIGR00465 3 GKTVAIIGY-GSQGHAQALNLRDSGL--NVIVGLRKGGASW-KKATED----GFKV---G-TVEEAIPQADLIMNLL 67 (314)
T ss_pred cCEEEEEeE-cHHHHHHHHHHHHCCC--eEEEEECcChhhH-HHHHHC----CCEE---C-CHHHHHhcCCEEEEeC
Confidence 469999999 9999999999999886 6666554431111 111111 1121 1 3567889999999985
No 374
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.57 E-value=0.11 Score=47.81 Aligned_cols=35 Identities=26% Similarity=0.371 Sum_probs=31.4
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 56 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~ 56 (369)
..++.|+||+|++|+.++..++.++. .++++|.+.
T Consensus 5 ~~~~lItG~~g~iG~~~a~~l~~~G~--~vi~~~r~~ 39 (253)
T PRK08217 5 DKVIVITGGAQGLGRAMAEYLAQKGA--KLALIDLNQ 39 (253)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCH
Confidence 45899999999999999999998887 899999876
No 375
>PLN02712 arogenate dehydrogenase
Probab=95.57 E-value=0.08 Score=57.03 Aligned_cols=67 Identities=19% Similarity=0.276 Sum_probs=46.9
Q ss_pred CCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcC-CCcEEEEc
Q 017551 17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALT-GMDLVIIP 95 (369)
Q Consensus 17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~-~ADiVii~ 95 (369)
..+++||+|||. |.||..++..|...+. +|+.+|.+.....+.++ . +.. .+++++.+. ++|+||++
T Consensus 366 ~~~~~kIgIIGl-G~mG~slA~~L~~~G~--~V~~~dr~~~~~~a~~~-----G--v~~---~~~~~el~~~~aDvVILa 432 (667)
T PLN02712 366 DGSKLKIAIVGF-GNFGQFLAKTMVKQGH--TVLAYSRSDYSDEAQKL-----G--VSY---FSDADDLCEEHPEVILLC 432 (667)
T ss_pred CCCCCEEEEEec-CHHHHHHHHHHHHCcC--EEEEEECChHHHHHHHc-----C--CeE---eCCHHHHHhcCCCEEEEC
Confidence 345689999998 9999999999998876 89999987521111111 1 122 235656565 59999998
Q ss_pred C
Q 017551 96 A 96 (369)
Q Consensus 96 a 96 (369)
.
T Consensus 433 v 433 (667)
T PLN02712 433 T 433 (667)
T ss_pred C
Confidence 4
No 376
>PF02423 OCD_Mu_crystall: Ornithine cyclodeaminase/mu-crystallin family; InterPro: IPR003462 This entry represents the bacterial ornithine cyclodeaminase enzyme family, which catalyse the deamination of ornithine to proline []. The family also includes mu-crystallin, a mammalian homologue of bacterial ornithine cyclodeaminase [], which is the major component of the eye lens in several Australian marsupials. mRNA for mu-crystallin has also been found in human retina [].; PDB: 1U7H_B 1X7D_B 2I99_B 3HDJ_A 1VLL_B 1OMO_A.
Probab=95.56 E-value=0.039 Score=53.90 Aligned_cols=70 Identities=16% Similarity=0.233 Sum_probs=46.8
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEc
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP 95 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ 95 (369)
...++|+|+ |..+..-+..+...-.+.+|.+||++. ....+.++.+ . ...+... +|.++|+++||+|+.+
T Consensus 128 ~~~l~viGa-G~QA~~~~~a~~~~~~i~~v~v~~r~~~~~~~~~~~~~~-~-~~~v~~~---~~~~~av~~aDii~ta 199 (313)
T PF02423_consen 128 ARTLGVIGA-GVQARWHLRALAAVRPIKEVRVYSRSPERAEAFAARLRD-L-GVPVVAV---DSAEEAVRGADIIVTA 199 (313)
T ss_dssp --EEEEE---SHHHHHHHHHHHHHS--SEEEEE-SSHHHHHHHHHHHHC-C-CTCEEEE---SSHHHHHTTSSEEEE-
T ss_pred CceEEEECC-CHHHHHHHHHHHHhCCceEEEEEccChhHHHHHHHhhcc-c-cccceec---cchhhhcccCCEEEEc
Confidence 459999999 988887777665533388999999987 4556666776 2 3455542 5688999999999875
No 377
>PRK07109 short chain dehydrogenase; Provisional
Probab=95.55 E-value=0.22 Score=48.81 Aligned_cols=113 Identities=16% Similarity=0.142 Sum_probs=65.1
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCC---hhhh-------c
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENA-------L 86 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~a-------l 86 (369)
.++|.|+||+|++|..++..|+..+. +|++++.+. ......++... ..++..+. .-+| .+++ +
T Consensus 8 ~k~vlITGas~gIG~~la~~la~~G~--~Vvl~~R~~~~l~~~~~~l~~~--g~~~~~v~~Dv~d~~~v~~~~~~~~~~~ 83 (334)
T PRK07109 8 RQVVVITGASAGVGRATARAFARRGA--KVVLLARGEEGLEALAAEIRAA--GGEALAVVADVADAEAVQAAADRAEEEL 83 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHHc--CCcEEEEEecCCCHHHHHHHHHHHHHHC
Confidence 45899999999999999999999987 899999876 22233333321 12222211 1122 2222 2
Q ss_pred CCCcEEEEcCCCCCC-C--CCCH---HHHHHHH----HHHHHHHHHHHhhhCCCeEEEEec
Q 017551 87 TGMDLVIIPAGVPRK-P--GMTR---DDLFNIN----AGIVRTLCEGIAKCCPNATVNLIS 137 (369)
Q Consensus 87 ~~ADiVii~ag~p~k-~--g~~r---~~~~~~N----~~i~~~i~~~i~~~~p~a~viv~t 137 (369)
...|++|..+|.... + ..+. ...+..| +...+.+.+.+.+. ..+.+++++
T Consensus 84 g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~-~~g~iV~is 143 (334)
T PRK07109 84 GPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPR-DRGAIIQVG 143 (334)
T ss_pred CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEeC
Confidence 368999999886421 1 1122 2223344 34455556665543 235566654
No 378
>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol
Probab=95.54 E-value=0.1 Score=47.61 Aligned_cols=35 Identities=26% Similarity=0.402 Sum_probs=30.7
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 56 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~ 56 (369)
..||.|+|+ |.+|+.++..|+..|. .+|.++|-+.
T Consensus 19 ~s~VlviG~-gglGsevak~L~~~GV-g~i~lvD~d~ 53 (198)
T cd01485 19 SAKVLIIGA-GALGAEIAKNLVLAGI-DSITIVDHRL 53 (198)
T ss_pred hCcEEEECC-CHHHHHHHHHHHHcCC-CEEEEEECCc
Confidence 359999999 8899999999999885 5899999774
No 379
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.54 E-value=0.09 Score=48.06 Aligned_cols=35 Identities=26% Similarity=0.358 Sum_probs=31.8
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 56 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~ 56 (369)
..+|.|+||+|++|+.++..++..+. +|++.+.+.
T Consensus 5 ~~~vlItGa~g~iG~~~a~~l~~~G~--~V~~~~r~~ 39 (238)
T PRK05786 5 GKKVAIIGVSEGLGYAVAYFALKEGA--QVCINSRNE 39 (238)
T ss_pred CcEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCH
Confidence 35899999999999999999999888 999999876
No 380
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.53 E-value=0.15 Score=47.04 Aligned_cols=34 Identities=15% Similarity=0.150 Sum_probs=29.1
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCC
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV 55 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~ 55 (369)
.++|.|+||+|++|+.++..|+..+. ++++.+.+
T Consensus 5 ~k~ilItGas~gIG~~la~~l~~~G~--~vv~~~~~ 38 (253)
T PRK08642 5 EQTVLVTGGSRGLGAAIARAFAREGA--RVVVNYHQ 38 (253)
T ss_pred CCEEEEeCCCCcHHHHHHHHHHHCCC--eEEEEcCC
Confidence 45899999999999999999998887 77776654
No 381
>PRK08703 short chain dehydrogenase; Provisional
Probab=95.53 E-value=0.42 Score=43.77 Aligned_cols=35 Identities=17% Similarity=0.223 Sum_probs=31.9
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 56 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~ 56 (369)
.++|.|+||+|++|..++..|+..+. +|++++.+.
T Consensus 6 ~k~vlItG~sggiG~~la~~l~~~g~--~V~~~~r~~ 40 (239)
T PRK08703 6 DKTILVTGASQGLGEQVAKAYAAAGA--TVILVARHQ 40 (239)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHcCC--EEEEEeCCh
Confidence 45899999999999999999999887 899999876
No 382
>PRK07831 short chain dehydrogenase; Provisional
Probab=95.53 E-value=0.42 Score=44.51 Aligned_cols=79 Identities=20% Similarity=0.221 Sum_probs=48.9
Q ss_pred CCCEEEEEcCCC-ccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCC---hhhh------
Q 017551 19 AGFKVAILGAAG-GIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENA------ 85 (369)
Q Consensus 19 ~~~KI~IiGA~G-~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~a------ 85 (369)
+.+++.|+||+| .+|..++..|+..+. +|++.|.+. ......++.......++..+. .-++ ..++
T Consensus 16 ~~k~vlItG~sg~gIG~~ia~~l~~~G~--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 93 (262)
T PRK07831 16 AGKVVLVTAAAGTGIGSATARRALEEGA--RVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVE 93 (262)
T ss_pred CCCEEEEECCCcccHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 357899999987 699999999999887 799999875 222223333211112333221 1112 2222
Q ss_pred -cCCCcEEEEcCCCC
Q 017551 86 -LTGMDLVIIPAGVP 99 (369)
Q Consensus 86 -l~~ADiVii~ag~p 99 (369)
+...|++|..+|..
T Consensus 94 ~~g~id~li~~ag~~ 108 (262)
T PRK07831 94 RLGRLDVLVNNAGLG 108 (262)
T ss_pred HcCCCCEEEECCCCC
Confidence 23679999999864
No 383
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=95.53 E-value=0.35 Score=45.07 Aligned_cols=116 Identities=18% Similarity=0.221 Sum_probs=65.5
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc---hhHHHHhhcccCCCeEEEEe-CCCChh---hh------
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMDTGAVVRGFL-GQPQLE---NA------ 85 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~---~g~~~dL~~~~~~~~v~~~~-~t~dl~---~a------ 85 (369)
+.+++.|+||+|.+|..++..|+..+. .+++.+.+.. .....++.+. ..++..+. .-+|.+ +.
T Consensus 6 ~~k~~lItGa~~gIG~~ia~~l~~~G~--~vvi~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~i~~~~~~~~~ 81 (261)
T PRK08936 6 EGKVVVITGGSTGLGRAMAVRFGKEKA--KVVINYRSDEEEANDVAEEIKKA--GGEAIAVKGDVTVESDVVNLIQTAVK 81 (261)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHHHHc--CCeEEEEEecCCCHHHHHHHHHHHHH
Confidence 346999999999999999999999886 7777766441 2222233321 12222221 112221 11
Q ss_pred -cCCCcEEEEcCCCCCC-C--CCCH---HHHHHHHHH----HHHHHHHHHhhhCCCeEEEEecC
Q 017551 86 -LTGMDLVIIPAGVPRK-P--GMTR---DDLFNINAG----IVRTLCEGIAKCCPNATVNLISN 138 (369)
Q Consensus 86 -l~~ADiVii~ag~p~k-~--g~~r---~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tN 138 (369)
+...|++|..+|.+.. + ..+. ...+..|+. +.+.+.+.+.+....+.++++|.
T Consensus 82 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS 145 (261)
T PRK08936 82 EFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSS 145 (261)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcc
Confidence 2357999999886432 1 1222 233556643 33455555555544566666653
No 384
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.53 E-value=0.096 Score=53.32 Aligned_cols=125 Identities=24% Similarity=0.304 Sum_probs=73.7
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhH---HHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEc
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV---TADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP 95 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~---~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ 95 (369)
+.++|.|+|+ |.+|..++..|+..|. +|+++|.+..... ..+|.. ..++.+.+. ...+...++|+||.+
T Consensus 4 ~~k~v~iiG~-g~~G~~~A~~l~~~G~--~V~~~d~~~~~~~~~~~~~l~~----~~~~~~~~~-~~~~~~~~~d~vv~~ 75 (450)
T PRK14106 4 KGKKVLVVGA-GVSGLALAKFLKKLGA--KVILTDEKEEDQLKEALEELGE----LGIELVLGE-YPEEFLEGVDLVVVS 75 (450)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCC--EEEEEeCCchHHHHHHHHHHHh----cCCEEEeCC-cchhHhhcCCEEEEC
Confidence 3569999999 8899999999999998 9999999752211 222321 122333221 112446789999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCC--ChhHHHHHHHHHh
Q 017551 96 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN--STVPIAAEVFKKA 154 (369)
Q Consensus 96 ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~--~~t~i~ae~~~~~ 154 (369)
+|.+...- .....-..+++++...+...... + ..+|-+|--.+ +++.+++.+|...
T Consensus 76 ~g~~~~~~-~~~~a~~~~i~~~~~~~~~~~~~-~-~~vI~ITGS~GKTTt~~~l~~iL~~~ 133 (450)
T PRK14106 76 PGVPLDSP-PVVQAHKKGIEVIGEVELAYRFS-K-APIVAITGTNGKTTTTTLLGEIFKNA 133 (450)
T ss_pred CCCCCCCH-HHHHHHHCCCcEEeHHHHHHhhc-C-CCEEEEeCCCchHHHHHHHHHHHHHc
Confidence 88753211 11111234666666655544422 2 34555554443 5556666666553
No 385
>PRK07985 oxidoreductase; Provisional
Probab=95.53 E-value=0.51 Score=45.20 Aligned_cols=115 Identities=18% Similarity=0.142 Sum_probs=65.6
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--h-hHHHHhhcccCCCeEEEEe-CCCCh----------hhhc
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--P-GVTADISHMDTGAVVRGFL-GQPQL----------ENAL 86 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~-g~~~dL~~~~~~~~v~~~~-~t~dl----------~~al 86 (369)
+++.|+||+|++|..++..|+..|. +|++.+.+.. . ....++.... ..++..+. .-+|. .+.+
T Consensus 50 k~vlITGas~gIG~aia~~L~~~G~--~Vi~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 126 (294)
T PRK07985 50 RKALVTGGDSGIGRAAAIAYAREGA--DVAISYLPVEEEDAQDVKKIIEEC-GRKAVLLPGDLSDEKFARSLVHEAHKAL 126 (294)
T ss_pred CEEEEECCCCcHHHHHHHHHHHCCC--EEEEecCCcchhhHHHHHHHHHHc-CCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 5899999999999999999999987 8888876531 1 1111221111 12222211 11221 1223
Q ss_pred CCCcEEEEcCCCCC--CC--CCCH---HHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecC
Q 017551 87 TGMDLVIIPAGVPR--KP--GMTR---DDLFNINAGIVRTLCEGIAKCC-PNATVNLISN 138 (369)
Q Consensus 87 ~~ADiVii~ag~p~--k~--g~~r---~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tN 138 (369)
...|++|..+|... .+ ..+. ...+..|+.....+.+.+..+. ..+.|+++|.
T Consensus 127 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS 186 (294)
T PRK07985 127 GGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSS 186 (294)
T ss_pred CCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECC
Confidence 56799999988632 11 2222 3345677765555555554432 3456777664
No 386
>PRK08264 short chain dehydrogenase; Validated
Probab=95.51 E-value=0.13 Score=47.07 Aligned_cols=113 Identities=13% Similarity=0.077 Sum_probs=64.8
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEe----CCCChhhhc---CCCcE
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL----GQPQLENAL---TGMDL 91 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~----~t~dl~~al---~~ADi 91 (369)
+.++|.|+||+|++|+.++..|+..+. .+|++++.+...... . ...+..+. ..+++.+.+ ...|+
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~-~~V~~~~r~~~~~~~---~----~~~~~~~~~D~~~~~~~~~~~~~~~~id~ 76 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGA-AKVYAAARDPESVTD---L----GPRVVPLQLDVTDPASVAAAAEAASDVTI 76 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCc-ccEEEEecChhhhhh---c----CCceEEEEecCCCHHHHHHHHHhcCCCCE
Confidence 345899999999999999999998874 378889887522111 1 11222211 112233333 35899
Q ss_pred EEEcCCCCCCC----CCCH---HHHHHHHHHHHHHHHHHHhhh---CCCeEEEEecCC
Q 017551 92 VIIPAGVPRKP----GMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISNP 139 (369)
Q Consensus 92 Vii~ag~p~k~----g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNP 139 (369)
||..+|.+..+ ..+. ...+..|......+.+.+... ...+.++++|..
T Consensus 77 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~ 134 (238)
T PRK08264 77 LVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSV 134 (238)
T ss_pred EEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCh
Confidence 99999873221 1222 233456665555555554432 234556666643
No 387
>PRK07340 ornithine cyclodeaminase; Validated
Probab=95.51 E-value=0.051 Score=52.86 Aligned_cols=71 Identities=13% Similarity=0.119 Sum_probs=50.3
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 96 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a 96 (369)
...+|+|+|+ |.+|...+..+.....+.++.++|.+. +...+.++... ...+. ..++++++.+||+||.+-
T Consensus 124 ~~~~v~IiGa-G~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~--~~~~~----~~~~~~av~~aDiVitaT 196 (304)
T PRK07340 124 PPGDLLLIGT-GVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARAL--GPTAE----PLDGEAIPEAVDLVVTAT 196 (304)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhc--CCeeE----ECCHHHHhhcCCEEEEcc
Confidence 3569999999 999999988886543346999999986 33344444422 12222 246778999999999974
No 388
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=95.51 E-value=0.043 Score=48.86 Aligned_cols=56 Identities=29% Similarity=0.488 Sum_probs=44.7
Q ss_pred CCCCEEEEEcCCCc-cHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551 18 AAGFKVAILGAAGG-IGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 96 (369)
Q Consensus 18 ~~~~KI~IiGA~G~-vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a 96 (369)
-+..||.|||+ |. +|..++..|...+. ++.+++.+. .++.+.+++||+||.+.
T Consensus 42 l~gk~vlViG~-G~~~G~~~a~~L~~~g~--~V~v~~r~~-----------------------~~l~~~l~~aDiVIsat 95 (168)
T cd01080 42 LAGKKVVVVGR-SNIVGKPLAALLLNRNA--TVTVCHSKT-----------------------KNLKEHTKQADIVIVAV 95 (168)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHhhCCC--EEEEEECCc-----------------------hhHHHHHhhCCEEEEcC
Confidence 45679999999 76 59989999988876 788888641 35667899999999987
Q ss_pred CCC
Q 017551 97 GVP 99 (369)
Q Consensus 97 g~p 99 (369)
+.|
T Consensus 96 ~~~ 98 (168)
T cd01080 96 GKP 98 (168)
T ss_pred CCC
Confidence 766
No 389
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=95.50 E-value=0.055 Score=46.68 Aligned_cols=57 Identities=26% Similarity=0.417 Sum_probs=45.7
Q ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551 18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 97 (369)
Q Consensus 18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag 97 (369)
-+.++|+|+|.+..+|.+++..|...+. .+.++|.+ +.|+++++++||+||.+.|
T Consensus 26 ~~gk~v~VvGrs~~vG~pla~lL~~~ga--tV~~~~~~-----------------------t~~l~~~v~~ADIVvsAtg 80 (140)
T cd05212 26 LDGKKVLVVGRSGIVGAPLQCLLQRDGA--TVYSCDWK-----------------------TIQLQSKVHDADVVVVGSP 80 (140)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC--EEEEeCCC-----------------------CcCHHHHHhhCCEEEEecC
Confidence 3457999999988999999999987765 66666643 2356788999999999987
Q ss_pred CC
Q 017551 98 VP 99 (369)
Q Consensus 98 ~p 99 (369)
.|
T Consensus 81 ~~ 82 (140)
T cd05212 81 KP 82 (140)
T ss_pred CC
Confidence 66
No 390
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=95.49 E-value=0.13 Score=48.45 Aligned_cols=35 Identities=23% Similarity=0.417 Sum_probs=31.4
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 56 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~ 56 (369)
..||+|+|+ |.+|+.++..|+..|. .++.|+|-+.
T Consensus 32 ~~~VliiG~-GglGs~va~~La~~Gv-g~i~lvD~D~ 66 (245)
T PRK05690 32 AARVLVVGL-GGLGCAASQYLAAAGV-GTLTLVDFDT 66 (245)
T ss_pred CCeEEEECC-CHHHHHHHHHHHHcCC-CEEEEEcCCE
Confidence 469999999 9999999999999884 6999999875
No 391
>TIGR02992 ectoine_eutC ectoine utilization protein EutC. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).
Probab=95.47 E-value=0.062 Score=52.79 Aligned_cols=72 Identities=17% Similarity=0.242 Sum_probs=50.8
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 96 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a 96 (369)
..+++|||+ |..|...+..+.....+.+|.+++.+. ....+.++.+.. ...+.. .+++++++.+||+|+.+-
T Consensus 129 ~~~v~iiGa-G~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~-g~~v~~---~~~~~~av~~aDiVvtaT 202 (326)
T TIGR02992 129 SSVVAIFGA-GMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLL-GIDVTA---ATDPRAAMSGADIIVTTT 202 (326)
T ss_pred CcEEEEECC-CHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhc-CceEEE---eCCHHHHhccCCEEEEec
Confidence 469999999 999988888776544467999999987 334444454321 122332 357888999999999974
No 392
>PRK06125 short chain dehydrogenase; Provisional
Probab=95.46 E-value=0.58 Score=43.47 Aligned_cols=114 Identities=18% Similarity=0.170 Sum_probs=65.2
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCChh------hhcCCCc
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQLE------NALTGMD 90 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~dl~------~al~~AD 90 (369)
.+++.|+||+|.+|..++..|+..+. +|++.|.+.. .....++.... ..++..+. .-+|.+ +.+...|
T Consensus 7 ~k~vlItG~~~giG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~g~id 83 (259)
T PRK06125 7 GKRVLITGASKGIGAAAAEAFAAEGC--HLHLVARDADALEALAADLRAAH-GVDVAVHALDLSSPEAREQLAAEAGDID 83 (259)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhhc-CCceEEEEecCCCHHHHHHHHHHhCCCC
Confidence 46899999999999999999999887 9999998762 22222333211 12222221 112221 2346799
Q ss_pred EEEEcCCCCC-CC--CCCH---HHHHHHHHHH----HHHHHHHHhhhCCCeEEEEec
Q 017551 91 LVIIPAGVPR-KP--GMTR---DDLFNINAGI----VRTLCEGIAKCCPNATVNLIS 137 (369)
Q Consensus 91 iVii~ag~p~-k~--g~~r---~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~t 137 (369)
++|..+|... .+ ..+. ...+..|+.- .+.+.+.+.+. ..+.++++|
T Consensus 84 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~is 139 (259)
T PRK06125 84 ILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKAR-GSGVIVNVI 139 (259)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCcEEEEec
Confidence 9999988643 11 1222 2334556553 44444444433 235566655
No 393
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.46 E-value=0.13 Score=52.88 Aligned_cols=125 Identities=15% Similarity=0.087 Sum_probs=70.9
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc-h-hH-HHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-P-GV-TADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 96 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~-~-g~-~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a 96 (369)
..+|+|+|+ |.+|..++..|...|. +|.++|.... . .. ...|... .+..+.+.. . +...++|+||++.
T Consensus 16 ~~~v~viG~-G~~G~~~A~~L~~~G~--~V~~~d~~~~~~~~~~~~~l~~~----gv~~~~~~~-~-~~~~~~D~Vv~s~ 86 (480)
T PRK01438 16 GLRVVVAGL-GVSGFAAADALLELGA--RVTVVDDGDDERHRALAAILEAL----GATVRLGPG-P-TLPEDTDLVVTSP 86 (480)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCC--EEEEEeCCchhhhHHHHHHHHHc----CCEEEECCC-c-cccCCCCEEEECC
Confidence 469999999 9999999999998887 8999997652 1 11 1223321 233333221 1 2356799999998
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHH--HHHhhhCCCeEEEEecCCCC--ChhHHHHHHHHHh
Q 017551 97 GVPRKPGMTRDDLFNINAGIVRTLC--EGIAKCCPNATVNLISNPVN--STVPIAAEVFKKA 154 (369)
Q Consensus 97 g~p~k~g~~r~~~~~~N~~i~~~i~--~~i~~~~p~a~viv~tNPv~--~~t~i~ae~~~~~ 154 (369)
|++..... ....-..+++++.++- ..+.....+..+|-+|--.+ +++.+++.+|+..
T Consensus 87 Gi~~~~~~-~~~a~~~gi~v~~~~e~~~~~~~~~~~~~~I~VTGTnGKTTTt~mi~~iL~~~ 147 (480)
T PRK01438 87 GWRPDAPL-LAAAADAGIPVWGEVELAWRLRDPDRPAPWLAVTGTNGKTTTVQMLASMLRAA 147 (480)
T ss_pred CcCCCCHH-HHHHHHCCCeecchHHHHHHhhhccCCCCEEEEeCCCcHHHHHHHHHHHHHHc
Confidence 88632211 1111234555554422 22211111334555654444 5667777777654
No 394
>PRK06141 ornithine cyclodeaminase; Validated
Probab=95.45 E-value=0.063 Score=52.42 Aligned_cols=72 Identities=14% Similarity=0.225 Sum_probs=49.4
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 96 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a 96 (369)
...+|+|||+ |.+|...+..+.....+.+|.++|++. ....+.++.+. ...+.. ..+.++++++||+|+.+-
T Consensus 124 ~~~~v~iiG~-G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~--g~~~~~---~~~~~~av~~aDIVi~aT 197 (314)
T PRK06141 124 DASRLLVVGT-GRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQ--GFDAEV---VTDLEAAVRQADIISCAT 197 (314)
T ss_pred CCceEEEECC-cHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhc--CCceEE---eCCHHHHHhcCCEEEEee
Confidence 3569999999 999999987665533366999999976 33444444432 123343 245678999999997653
No 395
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=95.43 E-value=0.17 Score=51.49 Aligned_cols=67 Identities=24% Similarity=0.223 Sum_probs=48.2
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV 98 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~ 98 (369)
...+|+|+|. |.+|..++..++..+. +|+.+|++..+.... +.. ... . .+++++++++|+||.+.|.
T Consensus 211 ~Gk~VlViG~-G~IG~~vA~~lr~~Ga--~ViV~d~dp~ra~~A---~~~-G~~--v----~~l~eal~~aDVVI~aTG~ 277 (425)
T PRK05476 211 AGKVVVVAGY-GDVGKGCAQRLRGLGA--RVIVTEVDPICALQA---AMD-GFR--V----MTMEEAAELGDIFVTATGN 277 (425)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC--EEEEEcCCchhhHHH---Hhc-CCE--e----cCHHHHHhCCCEEEECCCC
Confidence 4579999999 9999999999998887 899999987322111 111 111 1 1356788999999988664
No 396
>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form. This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.
Probab=95.43 E-value=0.037 Score=54.81 Aligned_cols=73 Identities=25% Similarity=0.271 Sum_probs=44.3
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEE-EEeCCCchhHHH-H-hhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLH-LYDVVNTPGVTA-D-ISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 96 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~-L~D~~~~~g~~~-d-L~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a 96 (369)
+||+|+||+|.+|..++..|...+.. +++ +++.+...+... + ..+......+... ..+.++.++++|+||++.
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~hP~~-el~~l~~s~~sagk~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~DvVf~al 76 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNHPEV-EITYLVSSRESAGKPVSEVHPHLRGLVDLNLE--PIDEEEIAEDADVVFLAL 76 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCc-eEEEEeccchhcCCChHHhCccccccCCceee--cCCHHHhhcCCCEEEECC
Confidence 58999999999999999999887654 555 778664222211 1 1111110112221 124444446999999974
No 397
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=95.40 E-value=0.16 Score=49.52 Aligned_cols=108 Identities=19% Similarity=0.136 Sum_probs=70.8
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC-----chhHHHHhhcccCCCeEEEEeC-CCC---hhhhc--CC
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-----TPGVTADISHMDTGAVVRGFLG-QPQ---LENAL--TG 88 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~-----~~g~~~dL~~~~~~~~v~~~~~-t~d---l~~al--~~ 88 (369)
...|.|+||+|+||++.++.|...+. +++.+|... ....+..+.+. ...+.++.+ -.| +++-+ ..
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy--~v~~vDNl~n~~~~sl~r~~~l~~~--~~~v~f~~~Dl~D~~~L~kvF~~~~ 77 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGY--GVVIVDNLNNSYLESLKRVRQLLGE--GKSVFFVEGDLNDAEALEKLFSEVK 77 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCC--cEEEEecccccchhHHHHHHHhcCC--CCceEEEEeccCCHHHHHHHHhhcC
Confidence 35899999999999999999999998 999999865 12223334432 234444321 122 22222 35
Q ss_pred CcEEEEcCCCCCC-CC-CCHHHHHHHHHHHHHHHHHHHhhhCCCe
Q 017551 89 MDLVIIPAGVPRK-PG-MTRDDLFNINAGIVRTLCEGIAKCCPNA 131 (369)
Q Consensus 89 ADiVii~ag~p~k-~g-~~r~~~~~~N~~i~~~i~~~i~~~~p~a 131 (369)
-|-|+..|+.... +. +.+..+...|+--...+.+.+.++.-..
T Consensus 78 fd~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~ 122 (343)
T KOG1371|consen 78 FDAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKA 122 (343)
T ss_pred CceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCce
Confidence 6888887765432 11 2346666788888889999999887333
No 398
>TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase. This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446).
Probab=95.38 E-value=0.054 Score=52.02 Aligned_cols=60 Identities=18% Similarity=0.307 Sum_probs=43.7
Q ss_pred EEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551 25 ILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 96 (369)
Q Consensus 25 IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a 96 (369)
|||. |.+|.+++..|...+. +|.+||++... ..++.... ... +.++.++++++|+||+..
T Consensus 1 ~IGl-G~mG~~mA~~L~~~G~--~V~v~dr~~~~--~~~l~~~g----~~~---~~s~~~~~~~advVil~v 60 (288)
T TIGR01692 1 FIGL-GNMGGPMAANLLKAGH--PVRVFDLFPDA--VEEAVAAG----AQA---AASPAEAAEGADRVITML 60 (288)
T ss_pred CCcc-cHhHHHHHHHHHhCCC--eEEEEeCCHHH--HHHHHHcC----Cee---cCCHHHHHhcCCEEEEeC
Confidence 5798 9999999999998887 89999987622 22232211 111 345678899999999984
No 399
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=95.37 E-value=0.058 Score=54.81 Aligned_cols=103 Identities=18% Similarity=0.233 Sum_probs=64.6
Q ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchh--HHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEc
Q 017551 18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP 95 (369)
Q Consensus 18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g--~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ 95 (369)
.+..+|+|+|+ |.+|..++..|...| +.+|+++|.+..+. .+..+. .. ... ..++.+++.++|+||.+
T Consensus 178 l~~~~VlViGa-G~iG~~~a~~L~~~G-~~~V~v~~rs~~ra~~la~~~g-----~~--~i~-~~~l~~~l~~aDvVi~a 247 (417)
T TIGR01035 178 LKGKKALLIGA-GEMGELVAKHLLRKG-VGKILIANRTYERAEDLAKELG-----GE--AVK-FEDLEEYLAEADIVISS 247 (417)
T ss_pred ccCCEEEEECC-hHHHHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHcC-----Ce--Eee-HHHHHHHHhhCCEEEEC
Confidence 34579999999 999999999998876 24899999875222 222221 11 111 23567889999999998
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCCCCCh
Q 017551 96 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNST 143 (369)
Q Consensus 96 ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~ 143 (369)
.+.|..- .+. +..+.....- ...+++-+++|-|+=
T Consensus 248 T~s~~~i-i~~------------e~l~~~~~~~~~~~~viDla~Prdid 283 (417)
T TIGR01035 248 TGAPHPI-VSK------------EDVERALRERTRPLFIIDIAVPRDVD 283 (417)
T ss_pred CCCCCce-EcH------------HHHHHHHhcCCCCeEEEEeCCCCCCC
Confidence 6655310 111 1111111111 245888899998875
No 400
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=95.35 E-value=0.031 Score=52.25 Aligned_cols=36 Identities=19% Similarity=0.259 Sum_probs=32.1
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 56 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~ 56 (369)
..+.+.|+||+|++|..++..|+..+. ++++.|.+.
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~~G~--~v~~~~~~~ 43 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLANGA--NVVNADIHG 43 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCc
Confidence 346899999999999999999999987 899999875
No 401
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=95.35 E-value=0.27 Score=45.24 Aligned_cols=74 Identities=16% Similarity=0.178 Sum_probs=45.3
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC---chhHHHHhhcccCCCeEEEEe-CCCC---hhhh-------c
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQ---LENA-------L 86 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~---~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~a-------l 86 (369)
++|.|+||+|++|+.++..|+..+. ++++.+.+. ......++.... .++..+. ..+| ..++ +
T Consensus 3 k~ilItGas~giG~~la~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 78 (248)
T PRK06947 3 KVVLITGASRGIGRATAVLAAARGW--SVGINYARDAAAAEETADAVRAAG--GRACVVAGDVANEADVIAMFDAVQSAF 78 (248)
T ss_pred cEEEEeCCCCcHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHHHhcC--CcEEEEEeccCCHHHHHHHHHHHHHhc
Confidence 4899999999999999999999886 777765433 222223333211 2222221 1122 2222 2
Q ss_pred CCCcEEEEcCCC
Q 017551 87 TGMDLVIIPAGV 98 (369)
Q Consensus 87 ~~ADiVii~ag~ 98 (369)
...|+||..+|.
T Consensus 79 ~~id~li~~ag~ 90 (248)
T PRK06947 79 GRLDALVNNAGI 90 (248)
T ss_pred CCCCEEEECCcc
Confidence 468999999885
No 402
>PRK05693 short chain dehydrogenase; Provisional
Probab=95.35 E-value=0.068 Score=50.31 Aligned_cols=34 Identities=26% Similarity=0.227 Sum_probs=30.6
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 56 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~ 56 (369)
+++.|+||+|++|..++..|+..+. +|++.|.+.
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~--~V~~~~r~~ 35 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGY--EVWATARKA 35 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC--EEEEEeCCH
Confidence 4799999999999999999998887 899999875
No 403
>PRK13304 L-aspartate dehydrogenase; Reviewed
Probab=95.34 E-value=0.12 Score=49.30 Aligned_cols=67 Identities=19% Similarity=0.342 Sum_probs=44.7
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCC-CCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINP-LVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 96 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~-~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a 96 (369)
+||+|||. |.+|+.++..+...+ ...-+.++|.+... +.++... .. ... .+++++.+.++|+|++++
T Consensus 2 mrIgIIG~-G~iG~~ia~~l~~~~~~~elv~v~d~~~~~--a~~~a~~-~~--~~~---~~~~~ell~~~DvVvi~a 69 (265)
T PRK13304 2 LKIGIVGC-GAIASLITKAILSGRINAELYAFYDRNLEK--AENLASK-TG--AKA---CLSIDELVEDVDLVVECA 69 (265)
T ss_pred CEEEEECc-cHHHHHHHHHHHcCCCCeEEEEEECCCHHH--HHHHHHh-cC--Cee---ECCHHHHhcCCCEEEEcC
Confidence 69999999 999999998887764 23336688987522 1222221 11 122 246667679999999986
No 404
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=95.33 E-value=0.17 Score=47.40 Aligned_cols=115 Identities=17% Similarity=0.256 Sum_probs=64.7
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCCh---hhh-------c
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL---ENA-------L 86 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~dl---~~a-------l 86 (369)
.+++.|+||+|++|..++..|+..+. ++++.|.+. ......++... ..++..+. .-+|. +++ +
T Consensus 10 ~k~~lItGa~~~iG~~ia~~l~~~G~--~vv~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 85 (265)
T PRK07097 10 GKIALITGASYGIGFAIAKAYAKAGA--TIVFNDINQELVDKGLAAYREL--GIEAHGYVCDVTDEDGVQAMVSQIEKEV 85 (265)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHHhC
Confidence 45899999999999999999999887 889998875 22222333321 12232221 11222 122 2
Q ss_pred CCCcEEEEcCCCCC-CC--CCCH---HHHHHHHHHH----HHHHHHHHhhhCCCeEEEEecCC
Q 017551 87 TGMDLVIIPAGVPR-KP--GMTR---DDLFNINAGI----VRTLCEGIAKCCPNATVNLISNP 139 (369)
Q Consensus 87 ~~ADiVii~ag~p~-k~--g~~r---~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tNP 139 (369)
...|++|..+|... .+ ..+. ...+..|..- .+.+.+.+.+ ...+.+++++..
T Consensus 86 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~g~iv~isS~ 147 (265)
T PRK07097 86 GVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIK-KGHGKIINICSM 147 (265)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh-cCCcEEEEEcCc
Confidence 45799999988632 11 1121 2234455443 3344444433 345667776654
No 405
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.33 E-value=0.051 Score=52.43 Aligned_cols=58 Identities=17% Similarity=0.359 Sum_probs=45.9
Q ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551 18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 97 (369)
Q Consensus 18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag 97 (369)
-+..+|+|||+|+.+|.+++..|...+. .+..++.. |.++.+.+++||+||.+.|
T Consensus 156 l~Gk~vvVIGrs~~VG~pla~lL~~~ga--tVtv~~s~-----------------------t~~l~~~~~~ADIVIsAvg 210 (286)
T PRK14175 156 LEGKNAVVIGRSHIVGQPVSKLLLQKNA--SVTILHSR-----------------------SKDMASYLKDADVIVSAVG 210 (286)
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHCCC--eEEEEeCC-----------------------chhHHHHHhhCCEEEECCC
Confidence 4467999999955599999999998775 77766632 2357788999999999988
Q ss_pred CCC
Q 017551 98 VPR 100 (369)
Q Consensus 98 ~p~ 100 (369)
.|.
T Consensus 211 ~p~ 213 (286)
T PRK14175 211 KPG 213 (286)
T ss_pred CCc
Confidence 763
No 406
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.32 E-value=0.14 Score=46.79 Aligned_cols=107 Identities=19% Similarity=0.164 Sum_probs=62.4
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeC-CCC----hhhhcCCCcEEEE
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG-QPQ----LENALTGMDLVII 94 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~-t~d----l~~al~~ADiVii 94 (369)
.+++.|+||+|++|+.++..|++.+. ++++.|.+.... . ..++..... -++ ..+.+...|+||.
T Consensus 5 ~k~~lVtGas~~iG~~ia~~l~~~G~--~v~~~~r~~~~~----~-----~~~~~~~~~D~~~~~~~~~~~~~~id~lv~ 73 (235)
T PRK06550 5 TKTVLITGAASGIGLAQARAFLAQGA--QVYGVDKQDKPD----L-----SGNFHFLQLDLSDDLEPLFDWVPSVDILCN 73 (235)
T ss_pred CCEEEEcCCCchHHHHHHHHHHHCCC--EEEEEeCCcccc----c-----CCcEEEEECChHHHHHHHHHhhCCCCEEEE
Confidence 35899999999999999999999887 899999875211 0 011222110 011 1233567899999
Q ss_pred cCCCCC--CC--CCCH---HHHHHHHHHHHHHHHHHHhhh---CCCeEEEEec
Q 017551 95 PAGVPR--KP--GMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLIS 137 (369)
Q Consensus 95 ~ag~p~--k~--g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~t 137 (369)
.+|... .+ ..+. ...+..|+.-...+.+.+... .+.+.+++++
T Consensus 74 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~s 126 (235)
T PRK06550 74 TAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMC 126 (235)
T ss_pred CCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEc
Confidence 998642 12 1222 234556655444444444322 2334565554
No 407
>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=95.30 E-value=0.081 Score=51.91 Aligned_cols=73 Identities=25% Similarity=0.322 Sum_probs=48.1
Q ss_pred CCEEEEEcCCCccHHHHHHHHHh-CCCCcEEEEEeCCCchhHH-HHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKI-NPLVSVLHLYDVVNTPGVT-ADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 97 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~-~~~~~el~L~D~~~~~g~~-~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag 97 (369)
++||+|+||+|.||+.+...|.. +..+.++.++=.....|.. .++..-.. .+... ..|. ..++++|+|+.++|
T Consensus 1 ~~~VavvGATG~VG~~~~~~L~e~~f~~~~~~~~AS~rSaG~~~~~f~~~~~--~v~~~--~~~~-~~~~~~Divf~~ag 75 (334)
T COG0136 1 KLNVAVLGATGAVGQVLLELLEERHFPFEELVLLASARSAGKKYIEFGGKSI--GVPED--AADE-FVFSDVDIVFFAAG 75 (334)
T ss_pred CcEEEEEeccchHHHHHHHHHHhcCCCcceEEEEecccccCCccccccCccc--cCccc--cccc-cccccCCEEEEeCc
Confidence 36999999999999999999998 5677778888776533332 33332111 11100 1222 45779999999875
No 408
>PRK07578 short chain dehydrogenase; Provisional
Probab=95.28 E-value=0.063 Score=48.00 Aligned_cols=104 Identities=21% Similarity=0.223 Sum_probs=58.5
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCCCC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPR 100 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~p~ 100 (369)
|++.|+||+|++|..++..|+++ .+|++.+.+.. ....|+.+... ++ ...+.+...|++|..+|...
T Consensus 1 ~~vlItGas~giG~~la~~l~~~---~~vi~~~r~~~-~~~~D~~~~~~---~~------~~~~~~~~id~lv~~ag~~~ 67 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR---HEVITAGRSSG-DVQVDITDPAS---IR------ALFEKVGKVDAVVSAAGKVH 67 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc---CcEEEEecCCC-ceEecCCChHH---HH------HHHHhcCCCCEEEECCCCCC
Confidence 58999999999999999999887 38899887541 11122222110 00 01122347899999998643
Q ss_pred C-C--CCCHHH---HHHHHHHHHHHHHHHHhhhC-CCeEEEEec
Q 017551 101 K-P--GMTRDD---LFNINAGIVRTLCEGIAKCC-PNATVNLIS 137 (369)
Q Consensus 101 k-~--g~~r~~---~~~~N~~i~~~i~~~i~~~~-p~a~viv~t 137 (369)
. + ..+..+ .+..|+.....+.+....+- +.+.++++|
T Consensus 68 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 111 (199)
T PRK07578 68 FAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTS 111 (199)
T ss_pred CCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEc
Confidence 1 1 123222 24455544444444443322 345555554
No 409
>PRK13302 putative L-aspartate dehydrogenase; Provisional
Probab=95.27 E-value=0.06 Score=51.50 Aligned_cols=71 Identities=24% Similarity=0.212 Sum_probs=46.1
Q ss_pred CCCCEEEEEcCCCccHHHHHHHHHhC-CCCcEE-EEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEc
Q 017551 18 AAGFKVAILGAAGGIGQPLAMLMKIN-PLVSVL-HLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP 95 (369)
Q Consensus 18 ~~~~KI~IiGA~G~vGs~la~~l~~~-~~~~el-~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ 95 (369)
.+++||+|||. |.+|+.++..|... +.. +| .++|.+... +.++.... ..... .+++++.+.++|+|+++
T Consensus 4 m~~irIGIIG~-G~IG~~~a~~L~~~~~~~-el~aV~dr~~~~--a~~~a~~~--g~~~~---~~~~eell~~~D~Vvi~ 74 (271)
T PRK13302 4 RPELRVAIAGL-GAIGKAIAQALDRGLPGL-TLSAVAVRDPQR--HADFIWGL--RRPPP---VVPLDQLATHADIVVEA 74 (271)
T ss_pred CCeeEEEEECc-cHHHHHHHHHHHhcCCCe-EEEEEECCCHHH--HHHHHHhc--CCCcc---cCCHHHHhcCCCEEEEC
Confidence 44689999999 99999999888764 322 55 488987522 22222211 00111 24567778999999999
Q ss_pred CC
Q 017551 96 AG 97 (369)
Q Consensus 96 ag 97 (369)
++
T Consensus 75 tp 76 (271)
T PRK13302 75 AP 76 (271)
T ss_pred CC
Confidence 63
No 410
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=95.27 E-value=0.052 Score=57.78 Aligned_cols=138 Identities=17% Similarity=0.212 Sum_probs=83.2
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCCh---h-hhcCCCcEEEEc
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQL---E-NALTGMDLVIIP 95 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl---~-~al~~ADiVii~ 95 (369)
..+|.|+|. |.+|+.++..|..++. +++++|.|+.. +..+.+.. ..-+.+. .++. + ..+++||.||++
T Consensus 400 ~~~vII~G~-Gr~G~~va~~L~~~g~--~vvvID~d~~~--v~~~~~~g-~~v~~GD--at~~~~L~~agi~~A~~vv~~ 471 (601)
T PRK03659 400 KPQVIIVGF-GRFGQVIGRLLMANKM--RITVLERDISA--VNLMRKYG-YKVYYGD--ATQLELLRAAGAEKAEAIVIT 471 (601)
T ss_pred cCCEEEecC-chHHHHHHHHHHhCCC--CEEEEECCHHH--HHHHHhCC-CeEEEee--CCCHHHHHhcCCccCCEEEEE
Confidence 468999999 9999999999998888 89999998622 22233322 1222332 2332 1 236799999998
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEE-ecCCCCChhHHHHHHHHHhCCCCCCcEEEechhcHHHHH
Q 017551 96 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNL-ISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRAN 174 (369)
Q Consensus 96 ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv-~tNPv~~~t~i~ae~~~~~~~~~~~kviG~t~Ld~~R~~ 174 (369)
-+-+ ..|. .++..+++.+|+..++. +.||.+. +.+++.+ .+.++-=+..-+.++-
T Consensus 472 ~~d~-----------~~n~----~i~~~~r~~~p~~~IiaRa~~~~~~------~~L~~~G---a~~vv~e~~es~l~l~ 527 (601)
T PRK03659 472 CNEP-----------EDTM----KIVELCQQHFPHLHILARARGRVEA------HELLQAG---VTQFSRETFSSALELG 527 (601)
T ss_pred eCCH-----------HHHH----HHHHHHHHHCCCCeEEEEeCCHHHH------HHHHhCC---CCEEEccHHHHHHHHH
Confidence 4211 3343 45566778889976544 4565433 3345543 2455433433334444
Q ss_pred HHHHHHhCCCCCCCc
Q 017551 175 TFVAEVLGLDPRDVD 189 (369)
Q Consensus 175 ~~la~~lgv~~~~V~ 189 (369)
...=..+|+++++++
T Consensus 528 ~~~L~~lg~~~~~~~ 542 (601)
T PRK03659 528 RKTLVSLGMHPHQAQ 542 (601)
T ss_pred HHHHHHcCCCHHHHH
Confidence 555577788876653
No 411
>PRK12743 oxidoreductase; Provisional
Probab=95.26 E-value=0.6 Score=43.36 Aligned_cols=114 Identities=14% Similarity=0.155 Sum_probs=63.7
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC---chhHHHHhhcccCCCeEEEEe-CCCCh---hhh-------c
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQL---ENA-------L 86 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~---~~g~~~dL~~~~~~~~v~~~~-~t~dl---~~a-------l 86 (369)
.+|.|+||+|++|+.++..|+..|. +|++.+... ......++.... .++..+. .-++. +.+ +
T Consensus 3 k~vlItGas~giG~~~a~~l~~~G~--~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 78 (256)
T PRK12743 3 QVAIVTASDSGIGKACALLLAQQGF--DIGITWHSDEEGAKETAEEVRSHG--VRAEIRQLDLSDLPEGAQALDKLIQRL 78 (256)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCChHHHHHHHHHHHhcC--CceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 4899999999999999999999987 888776433 222223333221 2222221 11222 111 2
Q ss_pred CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhh----hCCCeEEEEecC
Q 017551 87 TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAK----CCPNATVNLISN 138 (369)
Q Consensus 87 ~~ADiVii~ag~p~k~---g~~---r~~~~~~N~~i~~~i~~~i~~----~~p~a~viv~tN 138 (369)
...|+||..+|..... ..+ ....+..|......+.+.+.. ....+.++++|.
T Consensus 79 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS 140 (256)
T PRK12743 79 GRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITS 140 (256)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEee
Confidence 4579999998864321 112 233455565544445444333 223456776654
No 412
>PRK06940 short chain dehydrogenase; Provisional
Probab=95.26 E-value=0.19 Score=47.58 Aligned_cols=110 Identities=19% Similarity=0.236 Sum_probs=61.2
Q ss_pred EEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhh------cCCC
Q 017551 22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENA------LTGM 89 (369)
Q Consensus 22 KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~a------l~~A 89 (369)
.+.|+|| |++|..++..|. .+. +|++.|.+.. .....++.+. ..++..+. .-+| .+++ +...
T Consensus 4 ~~lItGa-~gIG~~la~~l~-~G~--~Vv~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~i 77 (275)
T PRK06940 4 VVVVIGA-GGIGQAIARRVG-AGK--KVLLADYNEENLEAAAKTLREA--GFDVSTQEVDVSSRESVKALAATAQTLGPV 77 (275)
T ss_pred EEEEECC-ChHHHHHHHHHh-CCC--EEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEeecCCHHHHHHHHHHHHhcCCC
Confidence 4566666 899999999985 565 9999998752 2222233321 12222221 1122 2222 2468
Q ss_pred cEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecC
Q 017551 90 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISN 138 (369)
Q Consensus 90 DiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tN 138 (369)
|++|..||... ........+..|+.-...+.+.+...- +++.+++++.
T Consensus 78 d~li~nAG~~~-~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS 126 (275)
T PRK06940 78 TGLVHTAGVSP-SQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIAS 126 (275)
T ss_pred CEEEECCCcCC-chhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEe
Confidence 99999998753 123345566777666555555554432 2344455543
No 413
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=95.21 E-value=0.12 Score=47.68 Aligned_cols=35 Identities=29% Similarity=0.286 Sum_probs=31.4
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 56 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~ 56 (369)
.+++.|+||+|++|+.++..|+..+. +++++|.+.
T Consensus 8 ~k~vlItGas~~iG~~la~~l~~~G~--~v~~~~~~~ 42 (252)
T PRK08220 8 GKTVWVTGAAQGIGYAVALAFVEAGA--KVIGFDQAF 42 (252)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEecch
Confidence 45899999999999999999999887 999999865
No 414
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=95.20 E-value=0.13 Score=52.15 Aligned_cols=90 Identities=21% Similarity=0.169 Sum_probs=60.7
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch-hHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 97 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~-g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag 97 (369)
...+|+|+|+ |.+|..++..++..|. +++.+|++..+ ..+..+ ...+ .+++++++++|+||.+.|
T Consensus 201 ~GktVvViG~-G~IG~~va~~ak~~Ga--~ViV~d~d~~R~~~A~~~-----G~~~------~~~~e~v~~aDVVI~atG 266 (413)
T cd00401 201 AGKVAVVAGY-GDVGKGCAQSLRGQGA--RVIVTEVDPICALQAAME-----GYEV------MTMEEAVKEGDIFVTTTG 266 (413)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCC--EEEEEECChhhHHHHHhc-----CCEE------ccHHHHHcCCCEEEECCC
Confidence 4579999999 9999999999998887 78899998732 222221 1111 123578899999999865
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCC
Q 017551 98 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP 139 (369)
Q Consensus 98 ~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP 139 (369)
.+ .++.. ..++...+.+++++++.+
T Consensus 267 ~~---------------~~i~~--~~l~~mk~GgilvnvG~~ 291 (413)
T cd00401 267 NK---------------DIITG--EHFEQMKDGAIVCNIGHF 291 (413)
T ss_pred CH---------------HHHHH--HHHhcCCCCcEEEEeCCC
Confidence 33 11211 124444578899899865
No 415
>PRK12747 short chain dehydrogenase; Provisional
Probab=95.17 E-value=0.6 Score=43.13 Aligned_cols=34 Identities=21% Similarity=0.258 Sum_probs=29.3
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCC
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV 55 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~ 55 (369)
.+.+.|+||+|++|..++..|+..|. +|++.+..
T Consensus 4 ~k~~lItGas~gIG~~ia~~l~~~G~--~v~~~~~~ 37 (252)
T PRK12747 4 GKVALVTGASRGIGRAIAKRLANDGA--LVAIHYGN 37 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC--eEEEEcCC
Confidence 45899999999999999999999987 78887543
No 416
>TIGR01724 hmd_rel H2-forming N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase-related protein. This model represents a sister clade to the authenticated coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase (HMD) of TIGR01723. Two members, designated HmdII and HmdIII, are found. Members are restricted to methanogens, but the function is unknown.
Probab=95.16 E-value=0.16 Score=49.68 Aligned_cols=66 Identities=15% Similarity=0.186 Sum_probs=45.6
Q ss_pred CEEEEEcCCCc--------------------cHHHHHHHHHhCCCCcEEEEEeCCCc---hhHHHHhhcccCCCeEEEEe
Q 017551 21 FKVAILGAAGG--------------------IGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMDTGAVVRGFL 77 (369)
Q Consensus 21 ~KI~IiGA~G~--------------------vGs~la~~l~~~~~~~el~L~D~~~~---~g~~~dL~~~~~~~~v~~~~ 77 (369)
|||+|-|| |+ -|+++|..|+..|+ +|++||++.. ......+.+.. ...
T Consensus 1 ~~~~~~g~-gnq~ly~~~~~~~~~~gg~~p~gGspMArnLlkAGh--eV~V~Drnrsa~e~e~~e~LaeaG----A~~-- 71 (341)
T TIGR01724 1 MKVSVYGA-GNQKLYTDELNLPEKFGGEPPYGGSRMAIEFAMAGH--DVVLAEPNREFMSDDLWKKVEDAG----VKV-- 71 (341)
T ss_pred CeeEEecC-cchhHHHHHhCChhhcCCCCCCCHHHHHHHHHHCCC--EEEEEeCChhhhhhhhhHHHHHCC----Cee--
Confidence 68888888 64 27788888888888 9999998752 12223344321 121
Q ss_pred CCCChhhhcCCCcEEEEcC
Q 017551 78 GQPQLENALTGMDLVIIPA 96 (369)
Q Consensus 78 ~t~dl~~al~~ADiVii~a 96 (369)
.++..++.++||+||+.-
T Consensus 72 -AaS~aEAAa~ADVVIL~L 89 (341)
T TIGR01724 72 -VSDDKEAAKHGEIHVLFT 89 (341)
T ss_pred -cCCHHHHHhCCCEEEEec
Confidence 234678999999999983
No 417
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.16 E-value=0.23 Score=47.94 Aligned_cols=79 Identities=27% Similarity=0.386 Sum_probs=50.8
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC---chhHHHHhhcccCCCeEEEEe-CCCC---hhhh------
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQ---LENA------ 85 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~---~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~a------ 85 (369)
+.+++.|+||+|++|..++..|+..+. ++++.|... ....+.++... ..++..+. .-+| ..+.
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga--~Vv~~~~~~~~~~~~~~~~i~~~--g~~~~~~~~Dv~d~~~~~~~~~~~~~ 86 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARLGA--TVVVNDVASALDASDVLDEIRAA--GAKAVAVAGDISQRATADELVATAVG 86 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC--EEEEecCCchhHHHHHHHHHHhc--CCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence 346899999999999999999999887 899999754 22223333321 22333221 1122 1121
Q ss_pred cCCCcEEEEcCCCCCC
Q 017551 86 LTGMDLVIIPAGVPRK 101 (369)
Q Consensus 86 l~~ADiVii~ag~p~k 101 (369)
+...|++|..+|..+.
T Consensus 87 ~g~iD~li~nAG~~~~ 102 (306)
T PRK07792 87 LGGLDIVVNNAGITRD 102 (306)
T ss_pred hCCCCEEEECCCCCCC
Confidence 2468999999997653
No 418
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.15 E-value=0.22 Score=50.64 Aligned_cols=116 Identities=20% Similarity=0.245 Sum_probs=67.6
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEe-CCCChhhh-------cCCCcE
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQLENA-------LTGMDL 91 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~-~t~dl~~a-------l~~ADi 91 (369)
..++.|+||+|++|..++..|+..+. +++++|.........++........+.... ...+.++. +...|+
T Consensus 210 g~~vlItGasggIG~~la~~l~~~Ga--~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~ 287 (450)
T PRK08261 210 GKVALVTGAARGIGAAIAEVLARDGA--HVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDI 287 (450)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCC--EEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCE
Confidence 46899999999999999999999887 899999854221122222111011122111 11111111 236899
Q ss_pred EEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHhhh---CCCeEEEEec
Q 017551 92 VIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLIS 137 (369)
Q Consensus 92 Vii~ag~p~k~---g~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~t 137 (369)
||..+|..... .++ ....+..|+.-...+.+.+... .+.+.++++|
T Consensus 288 vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~S 342 (450)
T PRK08261 288 VVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVS 342 (450)
T ss_pred EEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEEC
Confidence 99999875421 122 2334567777666776666542 2446677765
No 419
>PRK07201 short chain dehydrogenase; Provisional
Probab=95.13 E-value=0.2 Score=53.36 Aligned_cols=113 Identities=18% Similarity=0.199 Sum_probs=65.6
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhhcC------
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENALT------ 87 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~al~------ 87 (369)
.+++.|+||+|++|..++..|+..|. +|++++.+.. .....++... ..++..+. .-+| .+++++
T Consensus 371 ~k~vlItGas~giG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 446 (657)
T PRK07201 371 GKVVLITGASSGIGRATAIKVAEAGA--TVFLVARNGEALDELVAEIRAK--GGTAHAYTCDLTDSAAVDHTVKDILAEH 446 (657)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHhc
Confidence 46899999999999999999999987 8999998762 2222333221 12232221 1122 223333
Q ss_pred -CCcEEEEcCCCCCCCC---C-----CHHHHHHHHHHHHHHH----HHHHhhhCCCeEEEEec
Q 017551 88 -GMDLVIIPAGVPRKPG---M-----TRDDLFNINAGIVRTL----CEGIAKCCPNATVNLIS 137 (369)
Q Consensus 88 -~ADiVii~ag~p~k~g---~-----~r~~~~~~N~~i~~~i----~~~i~~~~p~a~viv~t 137 (369)
..|++|..||...... . .....+..|+.....+ .+.+.+. ..+.++++|
T Consensus 447 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~iv~is 508 (657)
T PRK07201 447 GHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRER-RFGHVVNVS 508 (657)
T ss_pred CCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc-CCCEEEEEC
Confidence 6899999998642211 1 1223455665544444 4444433 345566665
No 420
>PRK08177 short chain dehydrogenase; Provisional
Probab=95.13 E-value=0.11 Score=47.46 Aligned_cols=34 Identities=18% Similarity=0.073 Sum_probs=31.2
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 56 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~ 56 (369)
++|.|+||+|++|+.++..|+..+. +|+++|.+.
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~--~V~~~~r~~ 35 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGW--QVTATVRGP 35 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCC--EEEEEeCCC
Confidence 4799999999999999999999887 999999876
No 421
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.13 E-value=0.066 Score=51.61 Aligned_cols=57 Identities=19% Similarity=0.350 Sum_probs=44.8
Q ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551 18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 97 (369)
Q Consensus 18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag 97 (369)
-+.++|+|||.|+.+|.+++.+|...+. .+.+++. .|.|+.+.++.||+||.+.|
T Consensus 156 l~Gk~vvViGrs~iVGkPla~lL~~~~a--tVt~~hs-----------------------~t~~l~~~~~~ADIVV~avG 210 (285)
T PRK14189 156 LRGAHAVVIGRSNIVGKPMAMLLLQAGA--TVTICHS-----------------------KTRDLAAHTRQADIVVAAVG 210 (285)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHCCC--EEEEecC-----------------------CCCCHHHHhhhCCEEEEcCC
Confidence 3457999999977789999999988775 5555321 14578888999999999988
Q ss_pred CC
Q 017551 98 VP 99 (369)
Q Consensus 98 ~p 99 (369)
.|
T Consensus 211 ~~ 212 (285)
T PRK14189 211 KR 212 (285)
T ss_pred Cc
Confidence 55
No 422
>COG2344 AT-rich DNA-binding protein [General function prediction only]
Probab=95.11 E-value=0.069 Score=48.16 Aligned_cols=100 Identities=19% Similarity=0.292 Sum_probs=67.5
Q ss_pred CCCCCEEEEEcCCCccHHHHHH-HHHhCCCCcEEEEEeCCCc-hhHHHHhhcccCCCeEEEEeCCCChhhhcC--CCcEE
Q 017551 17 GAAGFKVAILGAAGGIGQPLAM-LMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFLGQPQLENALT--GMDLV 92 (369)
Q Consensus 17 ~~~~~KI~IiGA~G~vGs~la~-~l~~~~~~~el~L~D~~~~-~g~~~dL~~~~~~~~v~~~~~t~dl~~al~--~ADiV 92 (369)
..+..+|.|||+ |++|.+++. ....+.-..-+-.+|+++. -|. .. ..+.+. .-++++.-++ |.|+.
T Consensus 81 ~~~~tnviiVG~-GnlG~All~Y~f~~~~~~~iv~~FDv~~~~VG~------~~--~~v~V~-~~d~le~~v~~~dv~ia 150 (211)
T COG2344 81 QDKTTNVIIVGV-GNLGRALLNYNFSKKNGMKIVAAFDVDPDKVGT------KI--GDVPVY-DLDDLEKFVKKNDVEIA 150 (211)
T ss_pred CCcceeEEEEcc-ChHHHHHhcCcchhhcCceEEEEecCCHHHhCc------cc--CCeeee-chHHHHHHHHhcCccEE
Confidence 445679999999 999999985 5555555667889999862 111 00 123322 1245666665 88899
Q ss_pred EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCChh
Q 017551 93 IIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTV 144 (369)
Q Consensus 93 ii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t 144 (369)
|++. | ..-.+++++.+-+.+=++ |+++| |+.+.+
T Consensus 151 iLtV--P--------------a~~AQ~vad~Lv~aGVkG-IlNFt-Pv~l~~ 184 (211)
T COG2344 151 ILTV--P--------------AEHAQEVADRLVKAGVKG-ILNFT-PVRLQV 184 (211)
T ss_pred EEEc--c--------------HHHHHHHHHHHHHcCCce-EEecc-ceEecC
Confidence 9983 4 344668888888888888 67777 887765
No 423
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=95.11 E-value=0.12 Score=47.17 Aligned_cols=71 Identities=14% Similarity=0.092 Sum_probs=46.5
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 97 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag 97 (369)
+.+||.|||| |.+|...+..|...+. +|++++.+... ...++.+. ..+......-+ ++.+.++|+||.+-+
T Consensus 9 ~~k~vLVIGg-G~va~~ka~~Ll~~ga--~V~VIs~~~~~-~l~~l~~~---~~i~~~~~~~~-~~~l~~adlViaaT~ 79 (202)
T PRK06718 9 SNKRVVIVGG-GKVAGRRAITLLKYGA--HIVVISPELTE-NLVKLVEE---GKIRWKQKEFE-PSDIVDAFLVIAATN 79 (202)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCC--eEEEEcCCCCH-HHHHHHhC---CCEEEEecCCC-hhhcCCceEEEEcCC
Confidence 3569999999 9999999998888885 89999864322 22233322 12222211111 356899999888743
No 424
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.11 E-value=0.062 Score=51.84 Aligned_cols=57 Identities=19% Similarity=0.392 Sum_probs=44.8
Q ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551 18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 97 (369)
Q Consensus 18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag 97 (369)
-+.++|+|+|++|.+|.++++.|+..+. +|.+++.. +.++.+.+++||+||.+.|
T Consensus 157 l~Gk~vvViG~gg~vGkpia~~L~~~ga--tVtv~~~~-----------------------t~~L~~~~~~aDIvI~AtG 211 (283)
T PRK14192 157 LAGKHAVVVGRSAILGKPMAMMLLNANA--TVTICHSR-----------------------TQNLPELVKQADIIVGAVG 211 (283)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCC--EEEEEeCC-----------------------chhHHHHhccCCEEEEccC
Confidence 4557999999944599999999998876 88888741 2356677899999999986
Q ss_pred CC
Q 017551 98 VP 99 (369)
Q Consensus 98 ~p 99 (369)
.|
T Consensus 212 ~~ 213 (283)
T PRK14192 212 KP 213 (283)
T ss_pred CC
Confidence 44
No 425
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=95.06 E-value=0.45 Score=47.02 Aligned_cols=130 Identities=20% Similarity=0.190 Sum_probs=76.8
Q ss_pred CCCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc-hhHHHHhhcccCCCeEEEEeCCCChhhhcCC-CcEEEE
Q 017551 17 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFLGQPQLENALTG-MDLVII 94 (369)
Q Consensus 17 ~~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~-~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~-ADiVii 94 (369)
..+..+|+|+|+ |.+|......++..+. +++.+|+++. ...+.+|.- +....+...|..+++++ +|+|+.
T Consensus 164 ~~pG~~V~I~G~-GGlGh~avQ~Aka~ga--~Via~~~~~~K~e~a~~lGA-----d~~i~~~~~~~~~~~~~~~d~ii~ 235 (339)
T COG1064 164 VKPGKWVAVVGA-GGLGHMAVQYAKAMGA--EVIAITRSEEKLELAKKLGA-----DHVINSSDSDALEAVKEIADAIID 235 (339)
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHHHcCC--eEEEEeCChHHHHHHHHhCC-----cEEEEcCCchhhHHhHhhCcEEEE
Confidence 455689999999 8999888887776774 9999999873 233444421 11111111233344443 999999
Q ss_pred cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCC-CC-h-hHHHHHHHHHhCCCCCCcEEEec---hh
Q 017551 95 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV-NS-T-VPIAAEVFKKAGTYDPKKLLGVT---ML 168 (369)
Q Consensus 95 ~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv-~~-~-t~i~ae~~~~~~~~~~~kviG~t---~L 168 (369)
+++ +. .+-..++...+++.++.+.+|- .. . .+.. .. -+...+|.|.. .-
T Consensus 236 tv~-~~------------------~~~~~l~~l~~~G~~v~vG~~~~~~~~~~~~~-~l-----i~~~~~i~GS~~g~~~ 290 (339)
T COG1064 236 TVG-PA------------------TLEPSLKALRRGGTLVLVGLPGGGPIPLLPAF-LL-----ILKEISIVGSLVGTRA 290 (339)
T ss_pred CCC-hh------------------hHHHHHHHHhcCCEEEEECCCCCcccCCCCHH-Hh-----hhcCeEEEEEecCCHH
Confidence 975 31 2223344445899999999994 33 2 1111 11 13346888883 24
Q ss_pred cHHHHHHHHHH
Q 017551 169 DVVRANTFVAE 179 (369)
Q Consensus 169 d~~R~~~~la~ 179 (369)
|..-+.++.++
T Consensus 291 d~~e~l~f~~~ 301 (339)
T COG1064 291 DLEEALDFAAE 301 (339)
T ss_pred HHHHHHHHHHh
Confidence 44434444433
No 426
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=95.06 E-value=0.1 Score=53.70 Aligned_cols=91 Identities=21% Similarity=0.233 Sum_probs=61.8
Q ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchh-HHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551 18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG-VTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 96 (369)
Q Consensus 18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g-~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a 96 (369)
-..++|+|+|. |.||..++..+...+. +|..+|++.... .+.. + .. . ..+++++++.||+||.+.
T Consensus 252 LaGKtVgVIG~-G~IGr~vA~rL~a~Ga--~ViV~e~dp~~a~~A~~--~---G~--~----~~~leell~~ADIVI~at 317 (476)
T PTZ00075 252 IAGKTVVVCGY-GDVGKGCAQALRGFGA--RVVVTEIDPICALQAAM--E---GY--Q----VVTLEDVVETADIFVTAT 317 (476)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCC--EEEEEeCCchhHHHHHh--c---Cc--e----eccHHHHHhcCCEEEECC
Confidence 34579999999 9999999999997776 899999876322 1111 1 11 1 124678899999999985
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCC
Q 017551 97 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP 139 (369)
Q Consensus 97 g~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP 139 (369)
|.+ .++. .+.+...-|.+++++++-.
T Consensus 318 Gt~---------------~iI~--~e~~~~MKpGAiLINvGr~ 343 (476)
T PTZ00075 318 GNK---------------DIIT--LEHMRRMKNNAIVGNIGHF 343 (476)
T ss_pred Ccc---------------cccC--HHHHhccCCCcEEEEcCCC
Confidence 422 1111 1344445589999998754
No 427
>PRK06123 short chain dehydrogenase; Provisional
Probab=95.06 E-value=0.36 Score=44.30 Aligned_cols=114 Identities=18% Similarity=0.171 Sum_probs=62.4
Q ss_pred EEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC---chhHHHHhhcccCCCeEEEEe----CCCChhhhc-------C
Q 017551 22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL----GQPQLENAL-------T 87 (369)
Q Consensus 22 KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~---~~g~~~dL~~~~~~~~v~~~~----~t~dl~~al-------~ 87 (369)
.+.|+||+|++|+.++..|+..+. .+++.+.+. ......++.... ..+..+. ...++.+++ .
T Consensus 4 ~~lVtG~~~~iG~~~a~~l~~~G~--~vv~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 79 (248)
T PRK06123 4 VMIITGASRGIGAATALLAAERGY--AVCLNYLRNRDAAEAVVQAIRRQG--GEALAVAADVADEADVLRLFEAVDRELG 79 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCC--eEEEecCCCHHHHHHHHHHHHhCC--CcEEEEEeccCCHHHHHHHHHHHHHHhC
Confidence 689999999999999999998886 777877543 122222232211 1222111 112222333 3
Q ss_pred CCcEEEEcCCCCCCC----CCCH---HHHHHHHHHHHHHHHHHHhhh----C--CCeEEEEecCC
Q 017551 88 GMDLVIIPAGVPRKP----GMTR---DDLFNINAGIVRTLCEGIAKC----C--PNATVNLISNP 139 (369)
Q Consensus 88 ~ADiVii~ag~p~k~----g~~r---~~~~~~N~~i~~~i~~~i~~~----~--p~a~viv~tNP 139 (369)
..|+||..+|..... ..+. ...+..|+.....+.+...++ . .++.++++|..
T Consensus 80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~ 144 (248)
T PRK06123 80 RLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSM 144 (248)
T ss_pred CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECch
Confidence 679999999864321 1222 234566666544444443322 1 13556666653
No 428
>PRK08862 short chain dehydrogenase; Provisional
Probab=95.05 E-value=0.73 Score=42.47 Aligned_cols=115 Identities=12% Similarity=0.078 Sum_probs=65.1
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCC---hh-------hhc
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LE-------NAL 86 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~d---l~-------~al 86 (369)
.+.+.|+||++.+|..++..|++.+. +|++.+.+. ......++.... ..+..+. ..+| .+ +.+
T Consensus 5 ~k~~lVtGas~GIG~aia~~la~~G~--~V~~~~r~~~~l~~~~~~i~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (227)
T PRK08862 5 SSIILITSAGSVLGRTISCHFARLGA--TLILCDQDQSALKDTYEQCSALT--DNVYSFQLKDFSQESIRHLFDAIEQQF 80 (227)
T ss_pred CeEEEEECCccHHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHhcC--CCeEEEEccCCCHHHHHHHHHHHHHHh
Confidence 45899999999999999999999987 899999876 222222332211 1222221 1112 21 122
Q ss_pred C-CCcEEEEcCCCCCCCC----CCHHH---HHHHHH----HHHHHHHHHHhhhCCCeEEEEecC
Q 017551 87 T-GMDLVIIPAGVPRKPG----MTRDD---LFNINA----GIVRTLCEGIAKCCPNATVNLISN 138 (369)
Q Consensus 87 ~-~ADiVii~ag~p~k~g----~~r~~---~~~~N~----~i~~~i~~~i~~~~p~a~viv~tN 138 (369)
. .-|++|..+|....++ .+..+ .+..|. .+.+.+.+.+.+....+.|+++|.
T Consensus 81 g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS 144 (227)
T PRK08862 81 NRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVIS 144 (227)
T ss_pred CCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEec
Confidence 3 6899999987432221 22222 223332 334455566655444566777764
No 429
>PRK07589 ornithine cyclodeaminase; Validated
Probab=95.03 E-value=0.096 Score=51.97 Aligned_cols=71 Identities=18% Similarity=0.295 Sum_probs=50.9
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 96 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a 96 (369)
...++|||+ |..+...+..+..-..+.+|.+||.+. ....+.++.+. ..++.. .++.++++++||+|+.+-
T Consensus 129 a~~l~iiGa-G~QA~~~l~a~~~vr~i~~V~v~~r~~~~a~~~~~~~~~~--~~~v~~---~~~~~~av~~ADIIvtaT 201 (346)
T PRK07589 129 SRTMALIGN-GAQSEFQALAFKALLGIEEIRLYDIDPAATAKLARNLAGP--GLRIVA---CRSVAEAVEGADIITTVT 201 (346)
T ss_pred CcEEEEECC-cHHHHHHHHHHHHhCCceEEEEEeCCHHHHHHHHHHHHhc--CCcEEE---eCCHHHHHhcCCEEEEec
Confidence 468999999 988877776555444578999999987 34455555541 233443 357889999999999863
No 430
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.03 E-value=0.52 Score=43.30 Aligned_cols=33 Identities=18% Similarity=0.291 Sum_probs=27.8
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeC
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDV 54 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~ 54 (369)
..+|.|+||+|++|++++..|++.+. ++++...
T Consensus 6 ~~~vlitGasg~iG~~l~~~l~~~g~--~v~~~~~ 38 (252)
T PRK06077 6 DKVVVVTGSGRGIGRAIAVRLAKEGS--LVVVNAK 38 (252)
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeC
Confidence 45899999999999999999998887 6666543
No 431
>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase. This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli.
Probab=95.02 E-value=0.096 Score=54.86 Aligned_cols=92 Identities=22% Similarity=0.329 Sum_probs=59.5
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCCC
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP 99 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~p 99 (369)
.++|+|||- |.||+.++..+..-+. +|+.||.......+.++ .+.. ..++++.+++||+|++.. |
T Consensus 138 gktvgIiG~-G~IG~~vA~~l~~fG~--~V~~~d~~~~~~~~~~~-------g~~~---~~~l~ell~~aDvV~l~l--P 202 (525)
T TIGR01327 138 GKTLGVIGL-GRIGSIVAKRAKAFGM--KVLAYDPYISPERAEQL-------GVEL---VDDLDELLARADFITVHT--P 202 (525)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC--EEEEECCCCChhHHHhc-------CCEE---cCCHHHHHhhCCEEEEcc--C
Confidence 479999999 9999999999987676 99999975322222211 1121 235789999999999984 3
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551 100 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 137 (369)
Q Consensus 100 ~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 137 (369)
..+. +-.++- .+.+....|.+++|+++
T Consensus 203 lt~~---------T~~li~--~~~l~~mk~ga~lIN~a 229 (525)
T TIGR01327 203 LTPE---------TRGLIG--AEELAKMKKGVIIVNCA 229 (525)
T ss_pred CChh---------hccCcC--HHHHhcCCCCeEEEEcC
Confidence 2211 111111 13344445788888886
No 432
>PLN02383 aspartate semialdehyde dehydrogenase
Probab=95.01 E-value=0.058 Score=53.48 Aligned_cols=73 Identities=23% Similarity=0.388 Sum_probs=46.3
Q ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCC-CCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551 18 AAGFKVAILGAAGGIGQPLAMLMKINP-LVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 96 (369)
Q Consensus 18 ~~~~KI~IiGA~G~vGs~la~~l~~~~-~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a 96 (369)
.+++||+|+||+|.+|..+...|..++ ...+|.++......|...+.. ...+..- ..+ .+++.++|+||.+.
T Consensus 5 ~~~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsaGk~~~~~----~~~~~v~--~~~-~~~~~~~D~vf~a~ 77 (344)
T PLN02383 5 ENGPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSAGKKVTFE----GRDYTVE--ELT-EDSFDGVDIALFSA 77 (344)
T ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCCCCCeeeec----CceeEEE--eCC-HHHHcCCCEEEECC
Confidence 346799999999999999998888743 345777665543222222221 1223321 123 25678999999986
Q ss_pred C
Q 017551 97 G 97 (369)
Q Consensus 97 g 97 (369)
+
T Consensus 78 p 78 (344)
T PLN02383 78 G 78 (344)
T ss_pred C
Confidence 4
No 433
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.01 E-value=0.068 Score=51.50 Aligned_cols=58 Identities=17% Similarity=0.321 Sum_probs=46.6
Q ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551 18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 97 (369)
Q Consensus 18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag 97 (369)
-..++|+|||.||.||.+++..|...+. .|.++... +.++++.+++||+||.+.|
T Consensus 156 l~Gk~v~vIG~S~ivG~Pla~lL~~~ga--tVtv~~s~-----------------------t~~l~~~~~~ADIVI~avg 210 (284)
T PRK14179 156 LEGKHAVVIGRSNIVGKPMAQLLLDKNA--TVTLTHSR-----------------------TRNLAEVARKADILVVAIG 210 (284)
T ss_pred CCCCEEEEECCCCcCcHHHHHHHHHCCC--EEEEECCC-----------------------CCCHHHHHhhCCEEEEecC
Confidence 3457999999999999999999998886 77766211 2356788999999999988
Q ss_pred CCC
Q 017551 98 VPR 100 (369)
Q Consensus 98 ~p~ 100 (369)
.|.
T Consensus 211 ~~~ 213 (284)
T PRK14179 211 RGH 213 (284)
T ss_pred ccc
Confidence 763
No 434
>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=95.00 E-value=0.12 Score=51.75 Aligned_cols=71 Identities=18% Similarity=0.194 Sum_probs=44.5
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCC-C-CcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINP-L-VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 97 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~-~-~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag 97 (369)
+||+|+||+|.+|+.+..+++.++ + +.+++++......+...++.. ....... ..+. +.++++|+|+.++|
T Consensus 2 ~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss~~sg~~~~~f~g----~~~~v~~-~~~~-~~~~~~Divf~a~~ 74 (369)
T PRK06598 2 KKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFSTSQAGGAAPSFGG----KEGTLQD-AFDI-DALKKLDIIITCQG 74 (369)
T ss_pred eEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecchhhCCcccccCC----CcceEEe-cCCh-hHhcCCCEEEECCC
Confidence 699999999999999997555554 3 567888776432222222222 1122221 1222 46789999999864
No 435
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=94.97 E-value=0.15 Score=51.15 Aligned_cols=34 Identities=29% Similarity=0.557 Sum_probs=30.7
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCC
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV 55 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~ 55 (369)
..||+|+|+ |.+|+.++..|+..|. .+|.|+|.+
T Consensus 135 ~~~VlvvG~-GG~Gs~ia~~La~~Gv-g~i~lvD~d 168 (376)
T PRK08762 135 EARVLLIGA-GGLGSPAALYLAAAGV-GTLGIVDHD 168 (376)
T ss_pred cCcEEEECC-CHHHHHHHHHHHHcCC-CeEEEEeCC
Confidence 459999999 9999999999999885 589999988
No 436
>PRK06953 short chain dehydrogenase; Provisional
Probab=94.95 E-value=0.11 Score=47.25 Aligned_cols=112 Identities=17% Similarity=0.157 Sum_probs=63.2
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEE-eCCCChhh---hcC--CCcEEEE
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGF-LGQPQLEN---ALT--GMDLVII 94 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~-~~t~dl~~---al~--~ADiVii 94 (369)
+++.|+||+|++|+.++..|+..+. +|+++|.+.... .++..... ..+... +...++++ .+. ..|+||.
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~--~v~~~~r~~~~~--~~~~~~~~-~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~ 76 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGW--RVIATARDAAAL--AALQALGA-EALALDVADPASVAGLAWKLDGEALDAAVY 76 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCC--EEEEEECCHHHH--HHHHhccc-eEEEecCCCHHHHHHHHHHhcCCCCCEEEE
Confidence 4789999999999999999988886 899999875211 12222110 111111 11112222 133 4799999
Q ss_pred cCCCCC--C-C--CCCH---HHHHHHHHHHHHHHHHHHhhhC--CCeEEEEec
Q 017551 95 PAGVPR--K-P--GMTR---DDLFNINAGIVRTLCEGIAKCC--PNATVNLIS 137 (369)
Q Consensus 95 ~ag~p~--k-~--g~~r---~~~~~~N~~i~~~i~~~i~~~~--p~a~viv~t 137 (369)
++|... . + ..+. ...+..|..-...+.+.+..+- ..+.+++++
T Consensus 77 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~is 129 (222)
T PRK06953 77 VAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLS 129 (222)
T ss_pred CCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEc
Confidence 988742 1 1 1122 3345667666666665555432 134455554
No 437
>PRK00421 murC UDP-N-acetylmuramate--L-alanine ligase; Provisional
Probab=94.93 E-value=0.18 Score=51.71 Aligned_cols=124 Identities=19% Similarity=0.227 Sum_probs=73.4
Q ss_pred CCCEEEEEcCCCccHHH-HHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551 19 AGFKVAILGAAGGIGQP-LAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 97 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~-la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag 97 (369)
+.+||.|+|. |..|.+ ++..|...|. +|...|.+... ...+|... .+..+.+. + .+.+.++|+||.+.|
T Consensus 6 ~~~~v~viG~-G~sG~s~~a~~L~~~G~--~V~~~D~~~~~-~~~~l~~~----gi~~~~~~-~-~~~~~~~d~vv~spg 75 (461)
T PRK00421 6 RIKRIHFVGI-GGIGMSGLAEVLLNLGY--KVSGSDLKESA-VTQRLLEL----GAIIFIGH-D-AENIKDADVVVYSSA 75 (461)
T ss_pred CCCEEEEEEE-chhhHHHHHHHHHhCCC--eEEEECCCCCh-HHHHHHHC----CCEEeCCC-C-HHHCCCCCEEEECCC
Confidence 3468999999 999999 7889999998 99999987632 12234332 22332222 2 356789999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec--CCCCChhHHHHHHHHHh
Q 017551 98 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS--NPVNSTVPIAAEVFKKA 154 (369)
Q Consensus 98 ~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t--NPv~~~t~i~ae~~~~~ 154 (369)
+|...-. ......++++++.+.-- +.+.+++..+|-+| |==.++|.+++++|+..
T Consensus 76 i~~~~~~-~~~a~~~~i~i~~~~e~-~~~~~~~~~~I~ITGTnGKTTTt~ll~~iL~~~ 132 (461)
T PRK00421 76 IPDDNPE-LVAARELGIPVVRRAEM-LAELMRFRTSIAVAGTHGKTTTTSLLAHVLAEA 132 (461)
T ss_pred CCCCCHH-HHHHHHCCCcEEeHHHH-HHHHHccCcEEEEECCCCHHHHHHHHHHHHHhc
Confidence 8853211 11222445565544222 12222222344454 43345667777777654
No 438
>PRK06823 ornithine cyclodeaminase; Validated
Probab=94.93 E-value=0.12 Score=50.67 Aligned_cols=71 Identities=14% Similarity=0.129 Sum_probs=50.6
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEc
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP 95 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ 95 (369)
....++|+|+ |..+...+..+..-..+.+|.+||.+.. ...+..+.+. ...+.. .++.++++++||+|+.+
T Consensus 127 d~~~l~iiG~-G~qA~~~~~a~~~v~~i~~v~v~~r~~~~a~~~~~~~~~~--~~~v~~---~~~~~~av~~ADIV~ta 199 (315)
T PRK06823 127 HVSAIGIVGT-GIQARMQLMYLKNVTDCRQLWVWGRSETALEEYRQYAQAL--GFAVNT---TLDAAEVAHAANLIVTT 199 (315)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhc--CCcEEE---ECCHHHHhcCCCEEEEe
Confidence 3569999999 9888888777766656789999999873 3333333332 233443 24678999999999986
No 439
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=94.91 E-value=0.079 Score=53.83 Aligned_cols=71 Identities=23% Similarity=0.190 Sum_probs=45.7
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEE-eCCCChhhh-cCCCcEEEEcC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGF-LGQPQLENA-LTGMDLVIIPA 96 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~-~~t~dl~~a-l~~ADiVii~a 96 (369)
|||.|+|+ |.+|+.++..|...+. +++++|.+..... .+.+.....-+.+. +....++++ ++++|.||++.
T Consensus 1 m~viIiG~-G~ig~~~a~~L~~~g~--~v~vid~~~~~~~--~~~~~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~~ 73 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLSGENN--DVTVIDTDEERLR--RLQDRLDVRTVVGNGSSPDVLREAGAEDADLLIAVT 73 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC--cEEEEECCHHHHH--HHHhhcCEEEEEeCCCCHHHHHHcCCCcCCEEEEec
Confidence 68999999 9999999999998887 8999998763211 12210000111111 011234455 78999999984
No 440
>TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial.
Probab=94.91 E-value=0.12 Score=51.65 Aligned_cols=71 Identities=15% Similarity=0.222 Sum_probs=46.3
Q ss_pred CEEEEEcCCCccHHHHHHHHH-hCCC-CcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551 21 FKVAILGAAGGIGQPLAMLMK-INPL-VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 97 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~-~~~~-~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag 97 (369)
+||+|+||+|.||+.+...|. +..+ +.+++++......|........ ...+.. .++ .+++++.|+|+.++|
T Consensus 1 ~~VavvGATG~VG~~ll~~L~~e~~fp~~~~~~~ss~~s~g~~~~f~~~--~~~v~~---~~~-~~~~~~vDivffa~g 73 (366)
T TIGR01745 1 KNVGLVGWRGMVGSVLMQRMQEERDFDAIRPVFFSTSQLGQAAPSFGGT--TGTLQD---AFD-IDALKALDIIITCQG 73 (366)
T ss_pred CeEEEEcCcCHHHHHHHHHHHhCCCCccccEEEEEchhhCCCcCCCCCC--cceEEc---Ccc-cccccCCCEEEEcCC
Confidence 489999999999999999888 4443 4788998876532322212111 112221 222 247899999999875
No 441
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=94.91 E-value=0.24 Score=45.06 Aligned_cols=35 Identities=17% Similarity=0.391 Sum_probs=31.1
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 56 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~ 56 (369)
..||+|+|+ |.+|+.++..|+..|. .+|+++|.+.
T Consensus 21 ~s~VlIiG~-gglG~evak~La~~GV-g~i~lvD~d~ 55 (197)
T cd01492 21 SARILLIGL-KGLGAEIAKNLVLSGI-GSLTILDDRT 55 (197)
T ss_pred hCcEEEEcC-CHHHHHHHHHHHHcCC-CEEEEEECCc
Confidence 359999999 8899999999999984 6899999874
No 442
>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]
Probab=94.91 E-value=0.19 Score=47.65 Aligned_cols=75 Identities=19% Similarity=0.212 Sum_probs=45.5
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEc
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP 95 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ 95 (369)
++||+|.||+|.||+.+...+.+.+...=+.-+|.......-.|..+......+.... +.|+.....++|++|=.
T Consensus 2 ~iki~V~Ga~GRMG~~ii~~v~~~~~~~L~aa~~~~~~~~~g~d~ge~~g~~~~gv~v-~~~~~~~~~~~DV~IDF 76 (266)
T COG0289 2 MIKVAVAGASGRMGRTLIRAVLEAPDLELVAAFDRPGSLSLGSDAGELAGLGLLGVPV-TDDLLLVKADADVLIDF 76 (266)
T ss_pred CceEEEEcCCChHHHHHHHHHhcCCCceEEEEEecCCccccccchhhhccccccCcee-ecchhhcccCCCEEEEC
Confidence 5799999999999999999999888444445566654111112222221111111111 24456778899988863
No 443
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=94.91 E-value=0.11 Score=52.87 Aligned_cols=105 Identities=19% Similarity=0.284 Sum_probs=65.2
Q ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch--hHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEc
Q 017551 18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP 95 (369)
Q Consensus 18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~--g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ 95 (369)
.+..+|+|+|+ |.+|..++..|...+ ..+|+++|.+... ..+.++. ..+.. ..++.+++.++|+||.+
T Consensus 180 ~~~~~vlViGa-G~iG~~~a~~L~~~G-~~~V~v~~r~~~ra~~la~~~g-----~~~~~---~~~~~~~l~~aDvVI~a 249 (423)
T PRK00045 180 LSGKKVLVIGA-GEMGELVAKHLAEKG-VRKITVANRTLERAEELAEEFG-----GEAIP---LDELPEALAEADIVISS 249 (423)
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHHCC-CCeEEEEeCCHHHHHHHHHHcC-----CcEee---HHHHHHHhccCCEEEEC
Confidence 34579999999 999999998888766 3589999987522 2222221 11111 24566788999999998
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-hhCCCeEEEEecCCCCChh
Q 017551 96 AGVPRKPGMTRDDLFNINAGIVRTLCEGIA-KCCPNATVNLISNPVNSTV 144 (369)
Q Consensus 96 ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~-~~~p~a~viv~tNPv~~~t 144 (369)
.|.|..- .+. ..++. .+. +.....+++-+++|-|+=.
T Consensus 250 T~s~~~~-i~~--------~~l~~---~~~~~~~~~~vviDla~Prdid~ 287 (423)
T PRK00045 250 TGAPHPI-IGK--------GMVER---ALKARRHRPLLLVDLAVPRDIEP 287 (423)
T ss_pred CCCCCcE-EcH--------HHHHH---HHhhccCCCeEEEEeCCCCCCcc
Confidence 6654310 111 11111 111 1134578889999988753
No 444
>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.88 E-value=0.086 Score=50.86 Aligned_cols=57 Identities=25% Similarity=0.435 Sum_probs=45.2
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV 98 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~ 98 (369)
+.++|+|||.|..||.+++.+|..++- .|.++.. .|.|+++.++.||+||.++|.
T Consensus 154 ~Gk~vvViGrS~iVGkPla~lL~~~~a--TVtichs-----------------------~T~~l~~~~~~ADIvIsAvGk 208 (287)
T PRK14173 154 AGKEVVVVGRSNIVGKPLAALLLREDA--TVTLAHS-----------------------KTQDLPAVTRRADVLVVAVGR 208 (287)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHCCC--EEEEeCC-----------------------CCCCHHHHHhhCCEEEEecCC
Confidence 457999999999999999999987764 5554331 245778889999999999987
Q ss_pred CC
Q 017551 99 PR 100 (369)
Q Consensus 99 p~ 100 (369)
|.
T Consensus 209 p~ 210 (287)
T PRK14173 209 PH 210 (287)
T ss_pred cC
Confidence 73
No 445
>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase
Probab=94.87 E-value=0.074 Score=53.45 Aligned_cols=76 Identities=13% Similarity=0.171 Sum_probs=46.0
Q ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhccc-CCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551 18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD-TGAVVRGFLGQPQLENALTGMDLVIIPA 96 (369)
Q Consensus 18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~-~~~~v~~~~~t~dl~~al~~ADiVii~a 96 (369)
.+++||+|+||+|.+|..+..+|..++. .+|.++..+...|....-.+.. ....+..+. ..+ .+.++++|+|+.+.
T Consensus 36 ~~~~kVaIvGATG~vG~eLlrlL~~hP~-~el~~l~s~~saG~~i~~~~~~l~~~~~~~~~-~~~-~~~~~~~DvVf~Al 112 (381)
T PLN02968 36 EEKKRIFVLGASGYTGAEVRRLLANHPD-FEITVMTADRKAGQSFGSVFPHLITQDLPNLV-AVK-DADFSDVDAVFCCL 112 (381)
T ss_pred ccccEEEEECCCChHHHHHHHHHHhCCC-CeEEEEEChhhcCCCchhhCccccCcccccee-cCC-HHHhcCCCEEEEcC
Confidence 3457999999999999999999988863 3888887654323221111100 001111111 112 23479999999974
No 446
>TIGR03736 PRTRC_ThiF PRTRC system ThiF family protein. A novel genetic system characterized by six major proteins, included a ParB homolog and a ThiF homolog, is designated PRTRC, or ParB-Related,ThiF-Related Cassette. This family is the PRTRC system ThiF family protein.
Probab=94.87 E-value=0.27 Score=46.42 Aligned_cols=38 Identities=21% Similarity=0.269 Sum_probs=31.3
Q ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCCC---------CcEEEEEeCCC
Q 017551 18 AAGFKVAILGAAGGIGQPLAMLMKINPL---------VSVLHLYDVVN 56 (369)
Q Consensus 18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~---------~~el~L~D~~~ 56 (369)
+++.||.|||+ |.+|+.++..|+..+. ..+|+|+|-|.
T Consensus 9 ~~~~~V~vvG~-GGlGs~v~~~Lar~G~a~~~~G~~~g~~i~lvD~D~ 55 (244)
T TIGR03736 9 SRPVSVVLVGA-GGTGSQVIAGLARLHHALKALGHPGGLAVTVYDDDT 55 (244)
T ss_pred hCCCeEEEEcC-ChHHHHHHHHHHHccccccccCCCCCCEEEEECCCE
Confidence 45679999999 9999999999987642 12999999875
No 447
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=94.84 E-value=0.16 Score=50.80 Aligned_cols=35 Identities=26% Similarity=0.447 Sum_probs=31.1
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 56 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~ 56 (369)
..||+|+|+ |.+|+.++..|+..|. .+|+|+|-+.
T Consensus 41 ~~~VliiG~-GglG~~v~~~La~~Gv-g~i~ivD~D~ 75 (370)
T PRK05600 41 NARVLVIGA-GGLGCPAMQSLASAGV-GTITLIDDDT 75 (370)
T ss_pred CCcEEEECC-CHHHHHHHHHHHHcCC-CEEEEEeCCE
Confidence 459999999 9999999999998884 5999999884
No 448
>PRK12744 short chain dehydrogenase; Provisional
Probab=94.83 E-value=0.59 Score=43.37 Aligned_cols=103 Identities=19% Similarity=0.227 Sum_probs=57.3
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC------chhHHHHhhcccCCCeEEEEe-CCCC---hhhh----
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN------TPGVTADISHMDTGAVVRGFL-GQPQ---LENA---- 85 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~------~~g~~~dL~~~~~~~~v~~~~-~t~d---l~~a---- 85 (369)
.+++.|+||+|++|..++..|+..+. ++++++.+. ......++.+. ..++..+. .-+| .++.
T Consensus 8 ~k~vlItGa~~gIG~~~a~~l~~~G~--~vv~i~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~ 83 (257)
T PRK12744 8 GKVVLIAGGAKNLGGLIARDLAAQGA--KAVAIHYNSAASKADAEETVAAVKAA--GAKAVAFQADLTTAAAVEKLFDDA 83 (257)
T ss_pred CcEEEEECCCchHHHHHHHHHHHCCC--cEEEEecCCccchHHHHHHHHHHHHh--CCcEEEEecCcCCHHHHHHHHHHH
Confidence 46899999999999999999998887 766665432 11122223221 12232221 1122 2222
Q ss_pred ---cCCCcEEEEcCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHHHhh
Q 017551 86 ---LTGMDLVIIPAGVPRK-P--GMT---RDDLFNINAGIVRTLCEGIAK 126 (369)
Q Consensus 86 ---l~~ADiVii~ag~p~k-~--g~~---r~~~~~~N~~i~~~i~~~i~~ 126 (369)
+...|++|..+|.... + ..+ ....+..|+.....+.+.+..
T Consensus 84 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~ 133 (257)
T PRK12744 84 KAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGR 133 (257)
T ss_pred HHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHH
Confidence 2468999999986432 1 122 233455675554445555443
No 449
>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional
Probab=94.83 E-value=0.08 Score=52.18 Aligned_cols=69 Identities=19% Similarity=0.349 Sum_probs=44.8
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCC-CCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINP-LVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 96 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~-~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a 96 (369)
+||+|+||+|++|+.+..+|...+ ...+|..+-.+...+...++.. ..+.... . + ..+++++|+||.+.
T Consensus 2 ~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~~~g----~~i~v~d-~-~-~~~~~~vDvVf~A~ 71 (334)
T PRK14874 2 YNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELSFKG----KELKVED-L-T-TFDFSGVDIALFSA 71 (334)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeeeeCC----ceeEEee-C-C-HHHHcCCCEEEECC
Confidence 699999999999999999998864 2347777755442232222221 2333321 1 2 24568999999985
No 450
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.82 E-value=0.083 Score=50.92 Aligned_cols=58 Identities=19% Similarity=0.395 Sum_probs=46.4
Q ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551 18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 97 (369)
Q Consensus 18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag 97 (369)
-+.++|+|||.|..||.+++.+|...+. .+.+++. .|.++.+.++.||+||.+.|
T Consensus 156 l~Gk~vvViGrS~iVG~Pla~lL~~~~a--tVt~chs-----------------------~t~~l~~~~~~ADIvI~AvG 210 (284)
T PRK14190 156 ISGKHVVVVGRSNIVGKPVGQLLLNENA--TVTYCHS-----------------------KTKNLAELTKQADILIVAVG 210 (284)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHCCC--EEEEEeC-----------------------CchhHHHHHHhCCEEEEecC
Confidence 3567999999999999999999988764 5555532 14567888999999999988
Q ss_pred CCC
Q 017551 98 VPR 100 (369)
Q Consensus 98 ~p~ 100 (369)
.|.
T Consensus 211 ~p~ 213 (284)
T PRK14190 211 KPK 213 (284)
T ss_pred CCC
Confidence 774
No 451
>PLN02503 fatty acyl-CoA reductase 2
Probab=94.81 E-value=0.4 Score=51.06 Aligned_cols=108 Identities=18% Similarity=0.142 Sum_probs=68.6
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhC-CCCcEEEEEeCCC--c---hhHHHHhhccc----------------CCCeEEEE
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN--T---PGVTADISHMD----------------TGAVVRGF 76 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~-~~~~el~L~D~~~--~---~g~~~dL~~~~----------------~~~~v~~~ 76 (369)
+.+.|.|+||+|++|..++..|+.. +-+.+|+++.... . .....++.+.. ...++...
T Consensus 118 ~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v 197 (605)
T PLN02503 118 RGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPV 197 (605)
T ss_pred cCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEE
Confidence 4679999999999999999888864 4567888887643 1 11111111100 01234333
Q ss_pred eCC-C---------ChhhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhh
Q 017551 77 LGQ-P---------QLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKC 127 (369)
Q Consensus 77 ~~t-~---------dl~~al~~ADiVii~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~ 127 (369)
.+. + +++...++.|+||.+|+.-. ...........|+....++.+.+.+.
T Consensus 198 ~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~-f~~~~~~a~~vNV~GT~nLLelA~~~ 257 (605)
T PLN02503 198 VGNVCESNLGLEPDLADEIAKEVDVIINSAANTT-FDERYDVAIDINTRGPCHLMSFAKKC 257 (605)
T ss_pred EeeCCCcccCCCHHHHHHHHhcCCEEEECccccc-cccCHHHHHHHHHHHHHHHHHHHHHc
Confidence 211 1 22333467999999987543 23456667788999999999988765
No 452
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.78 E-value=0.1 Score=50.31 Aligned_cols=57 Identities=18% Similarity=0.452 Sum_probs=45.9
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV 98 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~ 98 (369)
+.++|+|||.|..+|.+++.+|...+. .|.+++.. |.++++.++.||+||.+.|.
T Consensus 158 ~Gk~vvViGrs~iVG~Pla~lL~~~~a--tVtv~hs~-----------------------T~~l~~~~~~ADIvi~avG~ 212 (285)
T PRK10792 158 YGLNAVVVGASNIVGRPMSLELLLAGC--TVTVCHRF-----------------------TKNLRHHVRNADLLVVAVGK 212 (285)
T ss_pred CCCEEEEECCCcccHHHHHHHHHHCCC--eEEEEECC-----------------------CCCHHHHHhhCCEEEEcCCC
Confidence 457999999977799999999987765 66666432 35678889999999999987
Q ss_pred CC
Q 017551 99 PR 100 (369)
Q Consensus 99 p~ 100 (369)
|.
T Consensus 213 p~ 214 (285)
T PRK10792 213 PG 214 (285)
T ss_pred cc
Confidence 74
No 453
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=94.78 E-value=0.38 Score=44.13 Aligned_cols=113 Identities=15% Similarity=0.134 Sum_probs=61.4
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEe-CCCc--hhHHHHhhcccCCCeEEEEe-CCCC---hhhh-------c
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYD-VVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENA-------L 86 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D-~~~~--~g~~~dL~~~~~~~~v~~~~-~t~d---l~~a-------l 86 (369)
+.+.|+||+|++|..++..|+..+. ++++.. .+.. .....++.... .++..+. .-+| +.++ +
T Consensus 4 k~~lVtG~s~giG~~~a~~l~~~G~--~vv~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 79 (246)
T PRK12938 4 RIAYVTGGMGGIGTSICQRLHKDGF--KVVAGCGPNSPRRVKWLEDQKALG--FDFIASEGNVGDWDSTKAAFDKVKAEV 79 (246)
T ss_pred CEEEEECCCChHHHHHHHHHHHcCC--EEEEEcCCChHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 4689999999999999999999987 777754 3221 11222232211 2222111 1122 2222 2
Q ss_pred CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHH----HHHHHHhhhCCCeEEEEecC
Q 017551 87 TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVR----TLCEGIAKCCPNATVNLISN 138 (369)
Q Consensus 87 ~~ADiVii~ag~p~k~---g~~---r~~~~~~N~~i~~----~i~~~i~~~~p~a~viv~tN 138 (369)
...|+||..+|..... ..+ ....+..|..-.. .+.+.+.+. ..+.++++|.
T Consensus 80 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~isS 140 (246)
T PRK12938 80 GEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVER-GWGRIINISS 140 (246)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCeEEEEEec
Confidence 4689999999875421 112 2334566655533 344444332 3345666654
No 454
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.78 E-value=0.097 Score=50.29 Aligned_cols=57 Identities=19% Similarity=0.438 Sum_probs=45.9
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV 98 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~ 98 (369)
+.++|+|||.|..||.+++.+|.+++. .+.+++. .|.|+.+..+.||+||.++|.
T Consensus 157 ~Gk~vvViGrS~~VGkPla~lL~~~~A--tVt~chs-----------------------~T~~l~~~~~~ADIvIsAvGk 211 (278)
T PRK14172 157 EGKEVVVIGRSNIVGKPVAQLLLNENA--TVTICHS-----------------------KTKNLKEVCKKADILVVAIGR 211 (278)
T ss_pred CCCEEEEECCCccchHHHHHHHHHCCC--EEEEeCC-----------------------CCCCHHHHHhhCCEEEEcCCC
Confidence 457999999999999999999987764 5555542 145677888999999999987
Q ss_pred CC
Q 017551 99 PR 100 (369)
Q Consensus 99 p~ 100 (369)
|.
T Consensus 212 p~ 213 (278)
T PRK14172 212 PK 213 (278)
T ss_pred cC
Confidence 74
No 455
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=94.77 E-value=0.36 Score=44.28 Aligned_cols=71 Identities=17% Similarity=0.111 Sum_probs=48.5
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV 98 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~ 98 (369)
..||.|||+ |.+|..-+..|...+. +|+++|.+... ...++... .+++...+.-+ .+.+.++|+||.+-+.
T Consensus 9 gk~vlVvGg-G~va~rk~~~Ll~~ga--~VtVvsp~~~~-~l~~l~~~---~~i~~~~~~~~-~~dl~~~~lVi~at~d 79 (205)
T TIGR01470 9 GRAVLVVGG-GDVALRKARLLLKAGA--QLRVIAEELES-ELTLLAEQ---GGITWLARCFD-ADILEGAFLVIAATDD 79 (205)
T ss_pred CCeEEEECc-CHHHHHHHHHHHHCCC--EEEEEcCCCCH-HHHHHHHc---CCEEEEeCCCC-HHHhCCcEEEEECCCC
Confidence 459999999 9999999999998886 89999986432 22233321 24443322222 3568999999988543
No 456
>PRK07775 short chain dehydrogenase; Provisional
Probab=94.77 E-value=0.8 Score=43.16 Aligned_cols=34 Identities=21% Similarity=0.198 Sum_probs=30.5
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 56 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~ 56 (369)
+.+.|+||+|++|+.++..|+.+|. +|++.+.+.
T Consensus 11 ~~vlVtGa~g~iG~~la~~L~~~G~--~V~~~~r~~ 44 (274)
T PRK07775 11 RPALVAGASSGIGAATAIELAAAGF--PVALGARRV 44 (274)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCH
Confidence 4899999999999999999999887 888888765
No 457
>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=94.77 E-value=0.075 Score=52.50 Aligned_cols=71 Identities=20% Similarity=0.346 Sum_probs=44.9
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCC-CCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINP-LVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 96 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~-~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a 96 (369)
+++||+|+||+|.+|.-+..+|...+ ...+|+++-..+..|.-..+.. ..+.+. ..+. ++++++|+|+++.
T Consensus 3 ~~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~~~aG~~l~~~~----~~l~~~--~~~~-~~~~~vD~vFla~ 74 (336)
T PRK05671 3 QPLDIAVVGATGTVGEALVQILEERDFPVGTLHLLASSESAGHSVPFAG----KNLRVR--EVDS-FDFSQVQLAFFAA 74 (336)
T ss_pred CCCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECcccCCCeeccCC----cceEEe--eCCh-HHhcCCCEEEEcC
Confidence 44799999999999999999998643 3457777755442232222222 123322 1222 3478999999975
No 458
>PRK02705 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.76 E-value=0.15 Score=52.07 Aligned_cols=124 Identities=19% Similarity=0.230 Sum_probs=74.1
Q ss_pred EEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhH---HHHhhcccCCCeEEEEeCC-CCh---hhhcCCCcEEEE
Q 017551 22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV---TADISHMDTGAVVRGFLGQ-PQL---ENALTGMDLVII 94 (369)
Q Consensus 22 KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~---~~dL~~~~~~~~v~~~~~t-~dl---~~al~~ADiVii 94 (369)
||.|+|+ |..|.+.+..|...|. +|.+.|.+..... ...|... .++.+.+. .++ ...+.+.|.||.
T Consensus 2 ~v~viG~-G~sG~s~a~~l~~~G~--~V~~~D~~~~~~~~~~~~~l~~~----gi~~~~g~~~~~~~~~~~~~~~d~vv~ 74 (459)
T PRK02705 2 IAHVIGL-GRSGIAAARLLKAQGW--EVVVSDRNDSPELLERQQELEQE----GITVKLGKPLELESFQPWLDQPDLVVV 74 (459)
T ss_pred eEEEEcc-CHHHHHHHHHHHHCCC--EEEEECCCCchhhHHHHHHHHHc----CCEEEECCccchhhhhHHhhcCCEEEE
Confidence 7999999 9999999999999998 9999998762211 1123332 22332222 111 135788999999
Q ss_pred cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEe--cCCCCChhHHHHHHHHHh
Q 017551 95 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI--SNPVNSTVPIAAEVFKKA 154 (369)
Q Consensus 95 ~ag~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~--tNPv~~~t~i~ae~~~~~ 154 (369)
+.|+|...- ........+++++.++....+... +..+|-+ ||==.+++.+++.++...
T Consensus 75 s~gi~~~~~-~~~~a~~~~i~v~~~~~~~~~~~~-~~~~I~VTGT~GKTTTt~ml~~iL~~~ 134 (459)
T PRK02705 75 SPGIPWDHP-TLVELRERGIEVIGEIELAWRALK-HIPWVGITGTNGKTTVTALLAHILQAA 134 (459)
T ss_pred CCCCCCCCH-HHHHHHHcCCcEEEhHHHHHHhhc-CCCEEEEeCCCchHHHHHHHHHHHHHc
Confidence 988874321 111222456677766654433322 2234444 444446677777777664
No 459
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=94.76 E-value=0.18 Score=49.66 Aligned_cols=93 Identities=27% Similarity=0.367 Sum_probs=60.0
Q ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551 18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 97 (369)
Q Consensus 18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag 97 (369)
.+.+++.|+|. |.||+.++..++ +...+|+.||......... .. ..+. .++++.++.||+|++.+
T Consensus 144 l~gktvGIiG~-GrIG~avA~r~~--~Fgm~v~y~~~~~~~~~~~-~~------~~~y----~~l~ell~~sDii~l~~- 208 (324)
T COG1052 144 LRGKTLGIIGL-GRIGQAVARRLK--GFGMKVLYYDRSPNPEAEK-EL------GARY----VDLDELLAESDIISLHC- 208 (324)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHh--cCCCEEEEECCCCChHHHh-hc------Ccee----ccHHHHHHhCCEEEEeC-
Confidence 44689999999 999999999999 5555999999875311111 11 1121 23788999999999985
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551 98 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 137 (369)
Q Consensus 98 ~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 137 (369)
|..+. +| .++.. +.+++.-|.+++||.+
T Consensus 209 -Plt~~-T~--------hLin~--~~l~~mk~ga~lVNta 236 (324)
T COG1052 209 -PLTPE-TR--------HLINA--EELAKMKPGAILVNTA 236 (324)
T ss_pred -CCChH-Hh--------hhcCH--HHHHhCCCCeEEEECC
Confidence 32111 11 11111 3444455888888875
No 460
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.75 E-value=0.097 Score=50.50 Aligned_cols=57 Identities=19% Similarity=0.381 Sum_probs=45.9
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV 98 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~ 98 (369)
+.++|+|||.|..+|.+++.+|...+. .|.+++. .|.|+.+.++.||+||.++|.
T Consensus 163 ~Gk~vvViGrs~iVGkPla~lL~~~~a--tVtv~hs-----------------------~T~~l~~~~~~ADIvv~AvG~ 217 (287)
T PRK14176 163 EGKNAVIVGHSNVVGKPMAAMLLNRNA--TVSVCHV-----------------------FTDDLKKYTLDADILVVATGV 217 (287)
T ss_pred CCCEEEEECCCcccHHHHHHHHHHCCC--EEEEEec-----------------------cCCCHHHHHhhCCEEEEccCC
Confidence 467999999977799999999988775 6665552 145677889999999999998
Q ss_pred CC
Q 017551 99 PR 100 (369)
Q Consensus 99 p~ 100 (369)
|.
T Consensus 218 p~ 219 (287)
T PRK14176 218 KH 219 (287)
T ss_pred cc
Confidence 84
No 461
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.75 E-value=0.094 Score=50.52 Aligned_cols=58 Identities=21% Similarity=0.395 Sum_probs=46.2
Q ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551 18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 97 (369)
Q Consensus 18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag 97 (369)
-..++|+|||.|..||.+++.+|.+++. .+..++. .|.|+++.++.||+||.++|
T Consensus 157 l~Gk~vvViGrS~iVGkPla~lL~~~~a--tVt~chs-----------------------~T~~l~~~~~~ADIvIsAvG 211 (284)
T PRK14177 157 VTGKNAVVVGRSPILGKPMAMLLTEMNA--TVTLCHS-----------------------KTQNLPSIVRQADIIVGAVG 211 (284)
T ss_pred CCCCEEEEECCCCcchHHHHHHHHHCCC--EEEEeCC-----------------------CCCCHHHHHhhCCEEEEeCC
Confidence 3457999999999999999999988764 5555442 24577888999999999988
Q ss_pred CCC
Q 017551 98 VPR 100 (369)
Q Consensus 98 ~p~ 100 (369)
.|.
T Consensus 212 k~~ 214 (284)
T PRK14177 212 KPE 214 (284)
T ss_pred CcC
Confidence 774
No 462
>PLN00203 glutamyl-tRNA reductase
Probab=94.70 E-value=0.23 Score=51.94 Aligned_cols=106 Identities=13% Similarity=0.112 Sum_probs=63.8
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCCC
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP 99 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~p 99 (369)
..+|+|||+ |.+|..++..|...|. .+|++++.+..... .+........+... ..+++.+++.+||+||.+-+.+
T Consensus 266 ~kkVlVIGA-G~mG~~~a~~L~~~G~-~~V~V~nRs~era~--~La~~~~g~~i~~~-~~~dl~~al~~aDVVIsAT~s~ 340 (519)
T PLN00203 266 SARVLVIGA-GKMGKLLVKHLVSKGC-TKMVVVNRSEERVA--ALREEFPDVEIIYK-PLDEMLACAAEADVVFTSTSSE 340 (519)
T ss_pred CCEEEEEeC-HHHHHHHHHHHHhCCC-CeEEEEeCCHHHHH--HHHHHhCCCceEee-cHhhHHHHHhcCCEEEEccCCC
Confidence 579999999 9999999998887763 57999998752221 12211101122221 1246678899999999875433
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhhh----CCCeEEEEecCCCCCh
Q 017551 100 RKPGMTRDDLFNINAGIVRTLCEGIAKC----CPNATVNLISNPVNST 143 (369)
Q Consensus 100 ~k~g~~r~~~~~~N~~i~~~i~~~i~~~----~p~a~viv~tNPv~~~ 143 (369)
. |= +..+..+.+... ...-++|-++.|=|+=
T Consensus 341 ~-pv------------I~~e~l~~~~~~~~~~~~~~~~IDLAvPRdId 375 (519)
T PLN00203 341 T-PL------------FLKEHVEALPPASDTVGGKRLFVDISVPRNVG 375 (519)
T ss_pred C-Ce------------eCHHHHHHhhhcccccCCCeEEEEeCCCCCCc
Confidence 2 10 112233333211 1224678889998774
No 463
>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.69 E-value=0.22 Score=51.40 Aligned_cols=125 Identities=14% Similarity=0.138 Sum_probs=75.3
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV 98 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~ 98 (369)
+.+||.|+|+ |..|.+++..|...|. +|..+|.+... ..++... ..+..+.+..+ .+.+.++|+||.+.|+
T Consensus 14 ~~~~v~v~G~-G~sG~a~a~~L~~~G~--~V~~~D~~~~~--~~~~l~~---~gi~~~~~~~~-~~~~~~~d~vV~Spgi 84 (473)
T PRK00141 14 LSGRVLVAGA-GVSGRGIAAMLSELGC--DVVVADDNETA--RHKLIEV---TGVADISTAEA-SDQLDSFSLVVTSPGW 84 (473)
T ss_pred cCCeEEEEcc-CHHHHHHHHHHHHCCC--EEEEECCChHH--HHHHHHh---cCcEEEeCCCc-hhHhcCCCEEEeCCCC
Confidence 3468999999 9999999999999887 99999975422 1222111 12333332222 3457899999999998
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhh-----hC-CCeEEEEecCCCC--ChhHHHHHHHHHh
Q 017551 99 PRKPGMTRDDLFNINAGIVRTLCEGIAK-----CC-PNATVNLISNPVN--STVPIAAEVFKKA 154 (369)
Q Consensus 99 p~k~g~~r~~~~~~N~~i~~~i~~~i~~-----~~-p~a~viv~tNPv~--~~t~i~ae~~~~~ 154 (369)
|...-. .......+++++.++.-.... +. |. .+|-+|--.+ +++.+++.+++..
T Consensus 85 ~~~~p~-~~~a~~~gi~v~~~~el~~~~~~~~~~~~~~-~vIaVTGTnGKTTTt~ml~~iL~~~ 146 (473)
T PRK00141 85 RPDSPL-LVDAQSQGLEVIGDVELAWRLDQAGVFGEPR-TWLAVTGTNGKTTTTAMLAAMMQEG 146 (473)
T ss_pred CCCCHH-HHHHHHCCCceeeHHHHHHHhhhhhccCCCC-CEEEEeCCCcHHHHHHHHHHHHHhc
Confidence 853211 222234566666665543221 21 32 3445544444 5667777777654
No 464
>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.69 E-value=0.1 Score=50.55 Aligned_cols=58 Identities=17% Similarity=0.380 Sum_probs=45.9
Q ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551 18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 97 (369)
Q Consensus 18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag 97 (369)
-+.++|+|||.|..||.+++.+|.+++. .+.+++. .|.|+.+.++.||+||.++|
T Consensus 158 l~Gk~vvViGrS~iVGkPla~lL~~~~a--TVt~chs-----------------------~T~~l~~~~~~ADIvVsAvG 212 (294)
T PRK14187 158 LSGSDAVVIGRSNIVGKPMACLLLGENC--TVTTVHS-----------------------ATRDLADYCSKADILVAAVG 212 (294)
T ss_pred CCCCEEEEECCCccchHHHHHHHhhCCC--EEEEeCC-----------------------CCCCHHHHHhhCCEEEEccC
Confidence 4457999999999999999999987764 5554442 14567788999999999998
Q ss_pred CCC
Q 017551 98 VPR 100 (369)
Q Consensus 98 ~p~ 100 (369)
.|.
T Consensus 213 kp~ 215 (294)
T PRK14187 213 IPN 215 (294)
T ss_pred CcC
Confidence 774
No 465
>PRK06046 alanine dehydrogenase; Validated
Probab=94.68 E-value=0.13 Score=50.46 Aligned_cols=71 Identities=18% Similarity=0.264 Sum_probs=50.4
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 96 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a 96 (369)
..+|+|||+ |.+|...+..+...+.+.++.++|++. ....+.++.+. ....+.. .++++++++ +|+|+++-
T Consensus 129 ~~~vgiiG~-G~qa~~h~~al~~~~~i~~v~v~~r~~~~~~~~~~~~~~~-~~~~v~~---~~~~~~~l~-aDiVv~aT 201 (326)
T PRK06046 129 SKVVGIIGA-GNQARTQLLALSEVFDLEEVRVYDRTKSSAEKFVERMSSV-VGCDVTV---AEDIEEACD-CDILVTTT 201 (326)
T ss_pred CCEEEEECC-cHHHHHHHHHHHhhCCceEEEEECCCHHHHHHHHHHHHhh-cCceEEE---eCCHHHHhh-CCEEEEec
Confidence 469999999 999998888777666788999999987 33334444332 1223443 246778886 99999863
No 466
>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.67 E-value=0.11 Score=50.10 Aligned_cols=58 Identities=21% Similarity=0.368 Sum_probs=45.4
Q ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551 18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 97 (369)
Q Consensus 18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag 97 (369)
-+.++|+|||.|..||.+++.+|..++. .|.+++. .|.|+.+-++.||+||.++|
T Consensus 156 l~Gk~vvViGrS~~VGkPla~lL~~~~A--TVt~chs-----------------------~T~dl~~~~k~ADIvIsAvG 210 (282)
T PRK14180 156 TEGAYAVVVGASNVVGKPVSQLLLNAKA--TVTTCHR-----------------------FTTDLKSHTTKADILIVAVG 210 (282)
T ss_pred CCCCEEEEECCCCcchHHHHHHHHHCCC--EEEEEcC-----------------------CCCCHHHHhhhcCEEEEccC
Confidence 3467999999999999999999987764 5544432 14567778999999999998
Q ss_pred CCC
Q 017551 98 VPR 100 (369)
Q Consensus 98 ~p~ 100 (369)
.|.
T Consensus 211 kp~ 213 (282)
T PRK14180 211 KPN 213 (282)
T ss_pred CcC
Confidence 774
No 467
>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=94.66 E-value=0.12 Score=54.04 Aligned_cols=93 Identities=25% Similarity=0.364 Sum_probs=59.6
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV 98 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~ 98 (369)
..++|+|+|. |.||+.++..++.-+. +|+.||.........++ .+.. . ++++.++.||+|++..
T Consensus 139 ~gktvgIiG~-G~IG~~vA~~l~~fG~--~V~~~d~~~~~~~~~~~-------g~~~---~-~l~ell~~aDiV~l~l-- 202 (526)
T PRK13581 139 YGKTLGIIGL-GRIGSEVAKRAKAFGM--KVIAYDPYISPERAAQL-------GVEL---V-SLDELLARADFITLHT-- 202 (526)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC--EEEEECCCCChhHHHhc-------CCEE---E-cHHHHHhhCCEEEEcc--
Confidence 3579999999 9999999999987776 99999985422221111 1122 1 4788999999999984
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecC
Q 017551 99 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN 138 (369)
Q Consensus 99 p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tN 138 (369)
|..+. +-.++. .+.+...-|.+++|+++-
T Consensus 203 P~t~~---------t~~li~--~~~l~~mk~ga~lIN~aR 231 (526)
T PRK13581 203 PLTPE---------TRGLIG--AEELAKMKPGVRIINCAR 231 (526)
T ss_pred CCChH---------hhcCcC--HHHHhcCCCCeEEEECCC
Confidence 22111 111111 123333347888888863
No 468
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=94.66 E-value=0.2 Score=45.76 Aligned_cols=114 Identities=14% Similarity=0.164 Sum_probs=63.1
Q ss_pred EEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC---chhHHHHhhcccCCCeEEEEe-CCCCh---hhh-------cCC
Q 017551 23 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQL---ENA-------LTG 88 (369)
Q Consensus 23 I~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~---~~g~~~dL~~~~~~~~v~~~~-~t~dl---~~a-------l~~ 88 (369)
|.|+||+|++|..++..|++++. ++++++... ......++.+.. .++..+. .-+|. .++ +..
T Consensus 1 vlItGas~giG~~~a~~l~~~G~--~v~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 76 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGF--EICVHYHSGRSDAESVVSAIQAQG--GNARLLQFDVADRVACRTLLEADIAEHGA 76 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHHHHcC--CeEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 57999999999999999999987 888887643 122223333221 2333221 11222 122 234
Q ss_pred CcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHH----hhhCCCeEEEEecCCC
Q 017551 89 MDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGI----AKCCPNATVNLISNPV 140 (369)
Q Consensus 89 ADiVii~ag~p~k~---g~~---r~~~~~~N~~i~~~i~~~i----~~~~p~a~viv~tNPv 140 (369)
.|.+|..+|..... ..+ ....+..|......+.+.+ .+..+.+.++++|...
T Consensus 77 i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~ 138 (239)
T TIGR01831 77 YYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVS 138 (239)
T ss_pred CCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchh
Confidence 68899988864322 122 2344566665544444432 2223456666666543
No 469
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.65 E-value=0.11 Score=50.07 Aligned_cols=58 Identities=28% Similarity=0.472 Sum_probs=45.4
Q ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551 18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 97 (369)
Q Consensus 18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag 97 (369)
-+.++|+|||.|..||.+++.+|..++. .+.++.. .|.|+++.++.||+||.+.|
T Consensus 154 l~Gk~vvViGrS~iVGkPla~lL~~~~a--tVtichs-----------------------~T~~l~~~~~~ADIvI~AvG 208 (282)
T PRK14169 154 VAGKRVVIVGRSNIVGRPLAGLMVNHDA--TVTIAHS-----------------------KTRNLKQLTKEADILVVAVG 208 (282)
T ss_pred CCCCEEEEECCCccchHHHHHHHHHCCC--EEEEECC-----------------------CCCCHHHHHhhCCEEEEccC
Confidence 3457999999999999999999987764 4443321 24577888999999999998
Q ss_pred CCC
Q 017551 98 VPR 100 (369)
Q Consensus 98 ~p~ 100 (369)
.|.
T Consensus 209 ~p~ 211 (282)
T PRK14169 209 VPH 211 (282)
T ss_pred CcC
Confidence 774
No 470
>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=94.63 E-value=0.074 Score=52.30 Aligned_cols=73 Identities=26% Similarity=0.220 Sum_probs=47.7
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccC--CCeEEEEeCCCChhh-hcCCCcEEEEc
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT--GAVVRGFLGQPQLEN-ALTGMDLVIIP 95 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~--~~~v~~~~~t~dl~~-al~~ADiVii~ 95 (369)
++||+|+||+|+.|--+..+|..++.+ |+.++...+..|....-.|-.. ...++.. +-|.++ ...+||+||++
T Consensus 2 ~~kV~IvGasGYtG~EL~rlL~~Hp~v-e~~~~ss~~~~g~~~~~~~p~l~g~~~l~~~--~~~~~~~~~~~~DvvFla 77 (349)
T COG0002 2 MIKVGIVGASGYTGLELLRLLAGHPDV-ELILISSRERAGKPVSDVHPNLRGLVDLPFQ--TIDPEKIELDECDVVFLA 77 (349)
T ss_pred CceEEEEcCCCCcHHHHHHHHhcCCCe-EEEEeechhhcCCchHHhCcccccccccccc--cCChhhhhcccCCEEEEe
Confidence 579999999999999999999999865 5888887664444332222211 1223332 122222 35669999997
No 471
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=94.60 E-value=0.099 Score=50.28 Aligned_cols=73 Identities=12% Similarity=0.185 Sum_probs=47.8
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch--hHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 96 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~--g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a 96 (369)
+..++.|+|| |.+|..++..|+..+. .+|.+++++..+ ..+.++... ..+.......++.+.+.++|+||.+-
T Consensus 124 ~~k~vlvlGa-GGaarai~~aL~~~G~-~~i~I~nRt~~ka~~La~~~~~~---~~~~~~~~~~~~~~~~~~~DiVInaT 198 (282)
T TIGR01809 124 AGFRGLVIGA-GGTSRAAVYALASLGV-TDITVINRNPDKLSRLVDLGVQV---GVITRLEGDSGGLAIEKAAEVLVSTV 198 (282)
T ss_pred CCceEEEEcC-cHHHHHHHHHHHHcCC-CeEEEEeCCHHHHHHHHHHhhhc---CcceeccchhhhhhcccCCCEEEECC
Confidence 4568999999 9999999999998773 589999987532 233333211 12222111123445678999999974
No 472
>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain. The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.
Probab=94.59 E-value=0.28 Score=40.66 Aligned_cols=72 Identities=29% Similarity=0.381 Sum_probs=39.7
Q ss_pred EEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccC-CCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551 22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT-GAVVRGFLGQPQLENALTGMDLVIIPA 96 (369)
Q Consensus 22 KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~-~~~v~~~~~t~dl~~al~~ADiVii~a 96 (369)
||+|+|++|.+|..++..+...+.+.-..+++.+...+......+... ...+..+. ..+++ ..++|+|+++.
T Consensus 1 ki~iiG~~g~~g~~~~~~l~~~~~~~l~av~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~DvV~~~~ 73 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAEHPDFEVVALAASARSAGKRVSEAGPHLKGEVVLELE-PEDFE--ELAVDIVFLAL 73 (122)
T ss_pred CEEEECCCChHHHHHHHHHhcCCCceEEEEEechhhcCcCHHHHCcccccccccccc-cCChh--hcCCCEEEEcC
Confidence 689999879999999988888654433344465432222221122110 00011111 13332 35999999974
No 473
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=94.59 E-value=0.38 Score=46.04 Aligned_cols=35 Identities=20% Similarity=0.405 Sum_probs=31.1
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 56 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~ 56 (369)
..+|+|+|+ |.+|+.++..|+..|. .+|.|+|-+.
T Consensus 30 ~s~VlVvG~-GGVGs~vae~Lar~GV-g~itLiD~D~ 64 (268)
T PRK15116 30 DAHICVVGI-GGVGSWAAEALARTGI-GAITLIDMDD 64 (268)
T ss_pred CCCEEEECc-CHHHHHHHHHHHHcCC-CEEEEEeCCE
Confidence 459999999 9999999999999884 5899999874
No 474
>PRK05599 hypothetical protein; Provisional
Probab=94.58 E-value=0.8 Score=42.45 Aligned_cols=116 Identities=13% Similarity=0.213 Sum_probs=64.1
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC--chhHHHHhhcccCCCeEEEEe-CCCC---h-------hhhcC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---L-------ENALT 87 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~--~~g~~~dL~~~~~~~~v~~~~-~t~d---l-------~~al~ 87 (369)
|.+.|+||++++|..++..|. ++. .|++.+.+. +...+.++.... ...+..+. .-+| . .+.+.
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~--~Vil~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 76 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGE--DVVLAARRPEAAQGLASDLRQRG-ATSVHVLSFDAQDLDTHRELVKQTQELAG 76 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCC--EEEEEeCCHHHHHHHHHHHHhcc-CCceEEEEcccCCHHHHHHHHHHHHHhcC
Confidence 358899999999999999988 464 899999876 333344453321 11122111 1112 1 12235
Q ss_pred CCcEEEEcCCCCCCCC---CCH---HHHHHHH----HHHHHHHHHHHhhhCCCeEEEEecCCC
Q 017551 88 GMDLVIIPAGVPRKPG---MTR---DDLFNIN----AGIVRTLCEGIAKCCPNATVNLISNPV 140 (369)
Q Consensus 88 ~ADiVii~ag~p~k~g---~~r---~~~~~~N----~~i~~~i~~~i~~~~p~a~viv~tNPv 140 (369)
.-|++|..+|...... .+. .+....| ..+.+.+.+.+.+...++.|+++|.-.
T Consensus 77 ~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~ 139 (246)
T PRK05599 77 EISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIA 139 (246)
T ss_pred CCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccc
Confidence 6899999988743211 111 1222333 233345556665544456777776543
No 475
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.58 E-value=0.11 Score=50.01 Aligned_cols=58 Identities=16% Similarity=0.388 Sum_probs=45.7
Q ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551 18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 97 (369)
Q Consensus 18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag 97 (369)
-..++|+|||.|..||.+++.+|.+++. .+.+++. .|.|+++.++.||+||.++|
T Consensus 155 l~Gk~vvVvGrS~iVGkPla~lL~~~~a--tVtichs-----------------------~T~~l~~~~~~ADIvI~AvG 209 (284)
T PRK14170 155 IEGKRAVVIGRSNIVGKPVAQLLLNENA--TVTIAHS-----------------------RTKDLPQVAKEADILVVATG 209 (284)
T ss_pred CCCCEEEEECCCCcchHHHHHHHHHCCC--EEEEeCC-----------------------CCCCHHHHHhhCCEEEEecC
Confidence 3467999999988999999999987764 5554422 24567788999999999998
Q ss_pred CCC
Q 017551 98 VPR 100 (369)
Q Consensus 98 ~p~ 100 (369)
.|.
T Consensus 210 ~~~ 212 (284)
T PRK14170 210 LAK 212 (284)
T ss_pred CcC
Confidence 774
No 476
>TIGR01082 murC UDP-N-acetylmuramate--alanine ligase. UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (murein tripeptide ligase) is described by TIGR01081.
Probab=94.58 E-value=0.29 Score=50.01 Aligned_cols=125 Identities=18% Similarity=0.268 Sum_probs=72.6
Q ss_pred EEEEEcCCCccHHH-HHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCCCC
Q 017551 22 KVAILGAAGGIGQP-LAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPR 100 (369)
Q Consensus 22 KI~IiGA~G~vGs~-la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~p~ 100 (369)
+|.++|. |..|.. +|..|+..|. +|..+|.+... ...+|... .+..+.+ .+ .+.++++|+||.+.|+|.
T Consensus 1 ~~~~iGi-ggsGm~~la~~L~~~G~--~v~~~D~~~~~-~~~~l~~~----gi~~~~g-~~-~~~~~~~d~vV~spgi~~ 70 (448)
T TIGR01082 1 KIHFVGI-GGIGMSGIAEILLNRGY--QVSGSDIAENA-TTKRLEAL----GIPIYIG-HS-AENLDDADVVVVSAAIKD 70 (448)
T ss_pred CEEEEEE-CHHHHHHHHHHHHHCCC--eEEEECCCcch-HHHHHHHC----cCEEeCC-CC-HHHCCCCCEEEECCCCCC
Confidence 5889999 989997 8999999998 99999986532 22234321 2333333 23 356889999999999885
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec--CCCCChhHHHHHHHHHhCCCCC
Q 017551 101 KPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS--NPVNSTVPIAAEVFKKAGTYDP 159 (369)
Q Consensus 101 k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t--NPv~~~t~i~ae~~~~~~~~~~ 159 (369)
..-. .......+++++.+.-- +.+...+..+|-+| |==.++|.+++.+++.. |+++
T Consensus 71 ~~p~-~~~a~~~~i~v~~~~el-~~~~~~~~~~IaITGTnGKTTTt~ll~~iL~~~-g~~~ 128 (448)
T TIGR01082 71 DNPE-IVEAKERGIPVIRRAEM-LAELMRFRHSIAVAGTHGKTTTTAMIAVILKEA-GLDP 128 (448)
T ss_pred CCHH-HHHHHHcCCceEeHHHH-HHHHHhcCcEEEEECCCChHHHHHHHHHHHHHc-CCCC
Confidence 3211 11222345555544322 22222122244443 43345666676776554 4543
No 477
>PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.57 E-value=0.22 Score=51.10 Aligned_cols=124 Identities=20% Similarity=0.247 Sum_probs=75.3
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc---hhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 96 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~---~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a 96 (369)
..||.|+|. |..|.+++..|...|. +|.++|.+.. .....+|... .+..+.+. +..+.+.++|+||.+.
T Consensus 14 ~~~i~v~G~-G~sG~a~a~~L~~~G~--~V~~~D~~~~~~~~~~~~~l~~~----gi~~~~~~-~~~~~~~~~dlVV~Sp 85 (458)
T PRK01710 14 NKKVAVVGI-GVSNIPLIKFLVKLGA--KVTAFDKKSEEELGEVSNELKEL----GVKLVLGE-NYLDKLDGFDVIFKTP 85 (458)
T ss_pred CCeEEEEcc-cHHHHHHHHHHHHCCC--EEEEECCCCCccchHHHHHHHhC----CCEEEeCC-CChHHhccCCEEEECC
Confidence 359999999 9999999999999998 9999998752 1111223321 23333222 2245678999999998
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCC--ChhHHHHHHHHHh
Q 017551 97 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN--STVPIAAEVFKKA 154 (369)
Q Consensus 97 g~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~--~~t~i~ae~~~~~ 154 (369)
|+|...-+ .......+++++.++-. +.+.. +..+|-+|=-.+ +++.+++.+|...
T Consensus 86 gi~~~~p~-~~~a~~~~i~i~s~~e~-~~~~~-~~~vIaITGTnGKTTT~~ll~~iL~~~ 142 (458)
T PRK01710 86 SMRIDSPE-LVKAKEEGAYITSEMEE-FIKYC-PAKVFGVTGSDGKTTTTTLIYEMLKEE 142 (458)
T ss_pred CCCCCchH-HHHHHHcCCcEEechHH-hhhhc-CCCEEEEECCCCHHHHHHHHHHHHHhC
Confidence 88753221 22223566777665532 22332 233555554444 5666776777653
No 478
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.56 E-value=0.12 Score=49.81 Aligned_cols=58 Identities=22% Similarity=0.373 Sum_probs=45.3
Q ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551 18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 97 (369)
Q Consensus 18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag 97 (369)
-..++|+|||.|..||.+++.+|..++. .|.+++. .|.|+++.++.||+||.++|
T Consensus 155 l~Gk~vvVvGrS~iVGkPla~lL~~~~a--tVt~chs-----------------------~T~nl~~~~~~ADIvIsAvG 209 (282)
T PRK14166 155 LEGKDAVIIGASNIVGRPMATMLLNAGA--TVSVCHI-----------------------KTKDLSLYTRQADLIIVAAG 209 (282)
T ss_pred CCCCEEEEECCCCcchHHHHHHHHHCCC--EEEEeCC-----------------------CCCCHHHHHhhCCEEEEcCC
Confidence 3467999999999999999999987664 4444332 14567788999999999998
Q ss_pred CCC
Q 017551 98 VPR 100 (369)
Q Consensus 98 ~p~ 100 (369)
.|.
T Consensus 210 kp~ 212 (282)
T PRK14166 210 CVN 212 (282)
T ss_pred CcC
Confidence 774
No 479
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=94.51 E-value=0.28 Score=48.84 Aligned_cols=35 Identities=29% Similarity=0.503 Sum_probs=31.1
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 56 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~ 56 (369)
..||.|+|+ |++|+.++..|+..|. .+|.|+|-+.
T Consensus 28 ~~~VlivG~-GGlGs~~a~~La~~Gv-g~i~lvD~D~ 62 (355)
T PRK05597 28 DAKVAVIGA-GGLGSPALLYLAGAGV-GHITIIDDDT 62 (355)
T ss_pred CCeEEEECC-CHHHHHHHHHHHHcCC-CeEEEEeCCE
Confidence 359999999 9999999999998885 5899999885
No 480
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=94.51 E-value=0.23 Score=50.31 Aligned_cols=92 Identities=24% Similarity=0.208 Sum_probs=59.4
Q ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551 18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 97 (369)
Q Consensus 18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag 97 (369)
....+|+|+|. |.+|..++..++..+. +|+.+|.+....... ..+ .. .. .+++++++++|+||.+.|
T Consensus 193 l~Gk~VvViG~-G~IG~~vA~~ak~~Ga--~ViV~d~dp~r~~~A-~~~---G~--~v----~~leeal~~aDVVItaTG 259 (406)
T TIGR00936 193 IAGKTVVVAGY-GWCGKGIAMRARGMGA--RVIVTEVDPIRALEA-AMD---GF--RV----MTMEEAAKIGDIFITATG 259 (406)
T ss_pred CCcCEEEEECC-CHHHHHHHHHHhhCcC--EEEEEeCChhhHHHH-Hhc---CC--Ee----CCHHHHHhcCCEEEECCC
Confidence 34569999999 9999999999997776 899999887322111 111 11 11 134678999999998754
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCC
Q 017551 98 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP 139 (369)
Q Consensus 98 ~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP 139 (369)
.+ .++.. +.+...-+.+++++++-.
T Consensus 260 ~~---------------~vI~~--~~~~~mK~GailiN~G~~ 284 (406)
T TIGR00936 260 NK---------------DVIRG--EHFENMKDGAIVANIGHF 284 (406)
T ss_pred CH---------------HHHHH--HHHhcCCCCcEEEEECCC
Confidence 22 22221 133333467888888754
No 481
>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates. This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.
Probab=94.49 E-value=0.14 Score=45.26 Aligned_cols=66 Identities=14% Similarity=0.148 Sum_probs=42.3
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 96 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a 96 (369)
+.++|+|||- |+.|...++.|...++ +|..-..........--.+. + + ..+..+|.+.||+|++..
T Consensus 3 ~~k~IAViGy-GsQG~a~AlNLrDSG~--~V~Vglr~~s~s~~~A~~~G-f----~----v~~~~eAv~~aDvV~~L~ 68 (165)
T PF07991_consen 3 KGKTIAVIGY-GSQGHAHALNLRDSGV--NVIVGLREGSASWEKAKADG-F----E----VMSVAEAVKKADVVMLLL 68 (165)
T ss_dssp CTSEEEEES--SHHHHHHHHHHHHCC---EEEEEE-TTCHHHHHHHHTT------E----CCEHHHHHHC-SEEEE-S
T ss_pred CCCEEEEECC-ChHHHHHHHHHHhCCC--CEEEEecCCCcCHHHHHHCC-C----e----eccHHHHHhhCCEEEEeC
Confidence 3569999999 9999999999999998 77766665432222211221 1 1 234679999999999983
No 482
>PRK06199 ornithine cyclodeaminase; Validated
Probab=94.48 E-value=0.16 Score=50.96 Aligned_cols=72 Identities=15% Similarity=0.201 Sum_probs=51.4
Q ss_pred CCEEEEEcCCCccHHHHHHHHHh-CCCCcEEEEEeCCC--chhHHHHhhcccCC-CeEEEEeCCCChhhhcCCCcEEEEc
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKI-NPLVSVLHLYDVVN--TPGVTADISHMDTG-AVVRGFLGQPQLENALTGMDLVIIP 95 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~-~~~~~el~L~D~~~--~~g~~~dL~~~~~~-~~v~~~~~t~dl~~al~~ADiVii~ 95 (369)
...++|||+ |..+...+..+.. .+.+.+|.+||.+. +...+.++.+.... ..+.. .++.++++++||+|+.+
T Consensus 155 a~~l~iiG~-G~QA~~~l~a~~~v~~~i~~V~v~~r~~~~a~~f~~~~~~~~~~~~~v~~---~~s~~eav~~ADIVvta 230 (379)
T PRK06199 155 SKVVGLLGP-GVMGKTILAAFMAVCPGIDTIKIKGRGQKSLDSFATWVAETYPQITNVEV---VDSIEEVVRGSDIVTYC 230 (379)
T ss_pred CCEEEEECC-cHHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCCceEEE---eCCHHHHHcCCCEEEEc
Confidence 469999999 9888887776665 44588999999987 34455556543111 13444 35678999999999975
No 483
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=94.47 E-value=0.44 Score=41.79 Aligned_cols=67 Identities=12% Similarity=0.068 Sum_probs=44.4
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 96 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a 96 (369)
+.+||.|||| |.+|...+..|...+. +|++++.+.... ..++. .+......-+ ++.++++|+||.+-
T Consensus 12 ~~~~vlVvGG-G~va~rka~~Ll~~ga--~V~VIsp~~~~~-l~~l~------~i~~~~~~~~-~~dl~~a~lViaaT 78 (157)
T PRK06719 12 HNKVVVIIGG-GKIAYRKASGLKDTGA--FVTVVSPEICKE-MKELP------YITWKQKTFS-NDDIKDAHLIYAAT 78 (157)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC--EEEEEcCccCHH-HHhcc------CcEEEecccC-hhcCCCceEEEECC
Confidence 3569999999 9999999999998887 899997543221 12232 1111111111 35689999999873
No 484
>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional
Probab=94.47 E-value=0.16 Score=51.07 Aligned_cols=62 Identities=16% Similarity=0.196 Sum_probs=45.9
Q ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551 18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 96 (369)
Q Consensus 18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a 96 (369)
-..++|+|||. |.||+.++..+..-|. ++..||..... .. .... ..++++.++.||+|++..
T Consensus 114 L~gktvGIIG~-G~IG~~vA~~l~a~G~--~V~~~dp~~~~------~~----~~~~----~~~L~ell~~sDiI~lh~ 175 (378)
T PRK15438 114 LHDRTVGIVGV-GNVGRRLQARLEALGI--KTLLCDPPRAD------RG----DEGD----FRSLDELVQEADILTFHT 175 (378)
T ss_pred cCCCEEEEECc-CHHHHHHHHHHHHCCC--EEEEECCcccc------cc----cccc----cCCHHHHHhhCCEEEEeC
Confidence 34679999999 9999999999987777 99999964211 00 0011 236888899999999863
No 485
>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional
Probab=94.46 E-value=0.2 Score=49.26 Aligned_cols=93 Identities=19% Similarity=0.128 Sum_probs=57.3
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV 98 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~ 98 (369)
..++|.|||. |.||+.++..+. .++.-+|+.||.........++ .++. .++++.++.||+|++..
T Consensus 144 ~gktvGIiG~-G~IG~~va~~l~-~~fgm~V~~~~~~~~~~~~~~~-------~~~~----~~l~ell~~sDvv~lh~-- 208 (323)
T PRK15409 144 HHKTLGIVGM-GRIGMALAQRAH-FGFNMPILYNARRHHKEAEERF-------NARY----CDLDTLLQESDFVCIIL-- 208 (323)
T ss_pred CCCEEEEEcc-cHHHHHHHHHHH-hcCCCEEEEECCCCchhhHHhc-------CcEe----cCHHHHHHhCCEEEEeC--
Confidence 3479999999 999999998876 3333388888875321111111 1121 25788999999999974
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551 99 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 137 (369)
Q Consensus 99 p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 137 (369)
|..+. +-.++.. +.++..-|++++||++
T Consensus 209 plt~~---------T~~li~~--~~l~~mk~ga~lIN~a 236 (323)
T PRK15409 209 PLTDE---------THHLFGA--EQFAKMKSSAIFINAG 236 (323)
T ss_pred CCChH---------HhhccCH--HHHhcCCCCeEEEECC
Confidence 32221 1111111 2333345899999986
No 486
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=94.46 E-value=0.7 Score=42.07 Aligned_cols=112 Identities=17% Similarity=0.211 Sum_probs=61.5
Q ss_pred EEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeC-CCc--hhHHHHhhcccCCCeEEEEe-CCCCh---h-------hhcC
Q 017551 22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDV-VNT--PGVTADISHMDTGAVVRGFL-GQPQL---E-------NALT 87 (369)
Q Consensus 22 KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~-~~~--~g~~~dL~~~~~~~~v~~~~-~t~dl---~-------~al~ 87 (369)
.+.|+||+|++|+.++..|+..+. ++++... +.. .....++... ..++..+. .-+|. . +.+.
T Consensus 2 ~~lItG~sg~iG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 77 (242)
T TIGR01829 2 IALVTGGMGGIGTAICQRLAKDGY--RVAANCGPNEERAEAWLQEQGAL--GFDFRVVEGDVSSFESCKAAVAKVEAELG 77 (242)
T ss_pred EEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHHHhh--CCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 578999999999999999998887 7888776 321 1111222211 12222221 11221 1 2234
Q ss_pred CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHH----HHHHHhhhCCCeEEEEecC
Q 017551 88 GMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRT----LCEGIAKCCPNATVNLISN 138 (369)
Q Consensus 88 ~ADiVii~ag~p~k~---g~~---r~~~~~~N~~i~~~----i~~~i~~~~p~a~viv~tN 138 (369)
..|+||..+|..... ..+ ....+..|..-... +.+.+.+. +.+.++++|.
T Consensus 78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~iss 137 (242)
T TIGR01829 78 PIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRER-GWGRIINISS 137 (242)
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEEcc
Confidence 689999999864321 112 23345566554433 44444433 3445666664
No 487
>PRK06484 short chain dehydrogenase; Validated
Probab=94.45 E-value=0.11 Score=53.63 Aligned_cols=116 Identities=18% Similarity=0.213 Sum_probs=67.3
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEE-eCCCChhhhc-------CCC
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGF-LGQPQLENAL-------TGM 89 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~-~~t~dl~~al-------~~A 89 (369)
.+++.|+||+|++|..++..|+..+. +|++.|.+.. ......+... ...+... +...+..+.+ ...
T Consensus 269 ~k~~lItGas~gIG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~--~~~~~~D~~~~~~~~~~~~~~~~~~g~i 344 (520)
T PRK06484 269 PRVVAITGGARGIGRAVADRFAAAGD--RLLIIDRDAEGAKKLAEALGDE--HLSVQADITDEAAVESAFAQIQARWGRL 344 (520)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhCCc--eeEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 46899999999999999999999987 8999998752 2122222110 0111111 1111222222 457
Q ss_pred cEEEEcCCCCC--CC--CCC---HHHHHHHHHHHHHHHHHHHhhhC-CCeEEEEecCC
Q 017551 90 DLVIIPAGVPR--KP--GMT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNP 139 (369)
Q Consensus 90 DiVii~ag~p~--k~--g~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP 139 (369)
|++|..||... .+ ..+ ....+..|+.-...+.+.+..+- ..+.|+++|.-
T Consensus 345 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~ 402 (520)
T PRK06484 345 DVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSI 402 (520)
T ss_pred CEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECch
Confidence 99999998742 22 122 23445667665555555544332 34667777653
No 488
>PRK06484 short chain dehydrogenase; Validated
Probab=94.45 E-value=0.17 Score=52.37 Aligned_cols=114 Identities=18% Similarity=0.146 Sum_probs=63.7
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc--hhHHHHhhcccCCCeEEEE-eCCCChhh-------hcCCC
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGF-LGQPQLEN-------ALTGM 89 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~--~g~~~dL~~~~~~~~v~~~-~~t~dl~~-------al~~A 89 (369)
.+.+.|+||++++|..++..|+..+. .|+++|.+.. .....++.... ..+... +...++++ .+...
T Consensus 5 ~k~~lITGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~D~~~~~~~~~~~~~~~~~~g~i 80 (520)
T PRK06484 5 SRVVLVTGAAGGIGRAACQRFARAGD--QVVVADRNVERARERADSLGPDH--HALAMDVSDEAQIREGFEQLHREFGRI 80 (520)
T ss_pred CeEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhCCce--eEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence 45889999999999999999999987 8999998752 22222221100 011111 11112222 23468
Q ss_pred cEEEEcCCCC--C-CC--CCC---HHHHHHHHHH----HHHHHHHHHhhhCCCeEEEEec
Q 017551 90 DLVIIPAGVP--R-KP--GMT---RDDLFNINAG----IVRTLCEGIAKCCPNATVNLIS 137 (369)
Q Consensus 90 DiVii~ag~p--~-k~--g~~---r~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~t 137 (369)
|++|..+|.. . .+ ..+ ....+..|+. +.+.+.+.+.+....+.+++++
T Consensus 81 D~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~is 140 (520)
T PRK06484 81 DVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVA 140 (520)
T ss_pred CEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEEC
Confidence 9999999872 1 11 122 2334556654 4444555554333333566665
No 489
>PRK00257 erythronate-4-phosphate dehydrogenase; Validated
Probab=94.45 E-value=0.14 Score=51.38 Aligned_cols=90 Identities=23% Similarity=0.234 Sum_probs=59.1
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV 98 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~ 98 (369)
..++|+|||. |.||+.++..+..-|. +++.||..... . . .... ..++++.++.||+|++..
T Consensus 115 ~gktvGIIG~-G~IG~~va~~l~a~G~--~V~~~Dp~~~~---~---~----~~~~----~~~l~ell~~aDiV~lh~-- 175 (381)
T PRK00257 115 AERTYGVVGA-GHVGGRLVRVLRGLGW--KVLVCDPPRQE---A---E----GDGD----FVSLERILEECDVISLHT-- 175 (381)
T ss_pred CcCEEEEECC-CHHHHHHHHHHHHCCC--EEEEECCcccc---c---c----cCcc----ccCHHHHHhhCCEEEEeC--
Confidence 4579999999 9999999999987777 99999975311 0 0 0111 135788889999999973
Q ss_pred CCCC-C--CCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec
Q 017551 99 PRKP-G--MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 137 (369)
Q Consensus 99 p~k~-g--~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t 137 (369)
|..+ | .++ .++ |. +.+....|++++||++
T Consensus 176 Plt~~g~~~T~-~li--~~-------~~l~~mk~gailIN~a 207 (381)
T PRK00257 176 PLTKEGEHPTR-HLL--DE-------AFLASLRPGAWLINAS 207 (381)
T ss_pred cCCCCcccccc-ccC--CH-------HHHhcCCCCeEEEECC
Confidence 4322 1 121 111 11 2344445788888886
No 490
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=94.42 E-value=0.12 Score=51.67 Aligned_cols=76 Identities=18% Similarity=0.192 Sum_probs=51.3
Q ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEE-eCCCChhhhcCCCcEEEEcC
Q 017551 18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGF-LGQPQLENALTGMDLVIIPA 96 (369)
Q Consensus 18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~-~~t~dl~~al~~ADiVii~a 96 (369)
.++.||+|+|+ |.+|...+..++..+. +|..+|.+.... ..+.... ...+... ....++.+.++++|+||.+.
T Consensus 165 l~~~~VlViGa-G~vG~~aa~~a~~lGa--~V~v~d~~~~~~--~~l~~~~-g~~v~~~~~~~~~l~~~l~~aDvVI~a~ 238 (370)
T TIGR00518 165 VEPGDVTIIGG-GVVGTNAAKMANGLGA--TVTILDINIDRL--RQLDAEF-GGRIHTRYSNAYEIEDAVKRADLLIGAV 238 (370)
T ss_pred CCCceEEEEcC-CHHHHHHHHHHHHCCC--eEEEEECCHHHH--HHHHHhc-CceeEeccCCHHHHHHHHccCCEEEEcc
Confidence 45678999999 9999999999998886 799999875221 1111111 1112211 11235677889999999987
Q ss_pred CCC
Q 017551 97 GVP 99 (369)
Q Consensus 97 g~p 99 (369)
+.|
T Consensus 239 ~~~ 241 (370)
T TIGR00518 239 LIP 241 (370)
T ss_pred ccC
Confidence 654
No 491
>PLN02494 adenosylhomocysteinase
Probab=94.41 E-value=0.25 Score=50.84 Aligned_cols=93 Identities=22% Similarity=0.165 Sum_probs=62.6
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch-hHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 97 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~-g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag 97 (369)
...+|+|+|. |.+|+.++..+...+. +|+.+|++..+ ..+.+.. .. . .+++++++++|+||.+.|
T Consensus 253 aGKtVvViGy-G~IGr~vA~~aka~Ga--~VIV~e~dp~r~~eA~~~G-----~~--v----v~leEal~~ADVVI~tTG 318 (477)
T PLN02494 253 AGKVAVICGY-GDVGKGCAAAMKAAGA--RVIVTEIDPICALQALMEG-----YQ--V----LTLEDVVSEADIFVTTTG 318 (477)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCC--EEEEEeCCchhhHHHHhcC-----Ce--e----ccHHHHHhhCCEEEECCC
Confidence 4579999999 9999999999987776 89999998632 2222111 11 1 135678999999999754
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEecCCCCC
Q 017551 98 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNS 142 (369)
Q Consensus 98 ~p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~ 142 (369)
.. .++. .+.+...-+.+++++++-+.+.
T Consensus 319 t~---------------~vI~--~e~L~~MK~GAiLiNvGr~~~e 346 (477)
T PLN02494 319 NK---------------DIIM--VDHMRKMKNNAIVCNIGHFDNE 346 (477)
T ss_pred Cc---------------cchH--HHHHhcCCCCCEEEEcCCCCCc
Confidence 32 1111 2344444578999999876433
No 492
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.40 E-value=0.13 Score=49.82 Aligned_cols=58 Identities=22% Similarity=0.390 Sum_probs=45.3
Q ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551 18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 97 (369)
Q Consensus 18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag 97 (369)
-+.++|+|||.|..||.+++.+|.+++. .+..+. +.|.|+++.++.||+||.+.|
T Consensus 156 l~Gk~vvVIGrS~iVGkPla~lL~~~~a--tVtv~h-----------------------s~T~~l~~~~~~ADIvIsAvG 210 (297)
T PRK14186 156 IAGKKAVVVGRSILVGKPLALMLLAANA--TVTIAH-----------------------SRTQDLASITREADILVAAAG 210 (297)
T ss_pred CCCCEEEEECCCccchHHHHHHHHHCCC--EEEEeC-----------------------CCCCCHHHHHhhCCEEEEccC
Confidence 3457999999999999999999988764 444432 124577788999999999998
Q ss_pred CCC
Q 017551 98 VPR 100 (369)
Q Consensus 98 ~p~ 100 (369)
.|.
T Consensus 211 kp~ 213 (297)
T PRK14186 211 RPN 213 (297)
T ss_pred CcC
Confidence 773
No 493
>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.39 E-value=0.13 Score=49.64 Aligned_cols=57 Identities=25% Similarity=0.499 Sum_probs=44.4
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHh--CCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcC
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKI--NPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 96 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~--~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~a 96 (369)
+.++|+|||.|..||.+++.+|.. .+. .|.++.. .|.++++.++.||+||.++
T Consensus 157 ~Gk~vvViGrS~~VGkPla~lL~~~~~~a--tVtvchs-----------------------~T~~l~~~~k~ADIvV~Av 211 (284)
T PRK14193 157 AGAHVVVIGRGVTVGRPIGLLLTRRSENA--TVTLCHT-----------------------GTRDLAAHTRRADIIVAAA 211 (284)
T ss_pred CCCEEEEECCCCcchHHHHHHHhhccCCC--EEEEeCC-----------------------CCCCHHHHHHhCCEEEEec
Confidence 467999999999999999999986 343 4444322 2457888899999999999
Q ss_pred CCCC
Q 017551 97 GVPR 100 (369)
Q Consensus 97 g~p~ 100 (369)
|.|.
T Consensus 212 Gkp~ 215 (284)
T PRK14193 212 GVAH 215 (284)
T ss_pred CCcC
Confidence 8874
No 494
>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated
Probab=94.38 E-value=0.27 Score=49.57 Aligned_cols=35 Identities=23% Similarity=0.501 Sum_probs=31.1
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 56 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~ 56 (369)
..||.|+|+ |++|+.++..|+..|. .+|.|+|-+.
T Consensus 42 ~~~VlviG~-GGlGs~va~~La~~Gv-g~i~lvD~D~ 76 (392)
T PRK07878 42 NARVLVIGA-GGLGSPTLLYLAAAGV-GTLGIVEFDV 76 (392)
T ss_pred cCCEEEECC-CHHHHHHHHHHHHcCC-CeEEEECCCE
Confidence 459999999 9999999999999885 5899999875
No 495
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=94.38 E-value=0.88 Score=42.57 Aligned_cols=32 Identities=22% Similarity=0.224 Sum_probs=27.9
Q ss_pred EEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCC
Q 017551 22 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV 55 (369)
Q Consensus 22 KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~ 55 (369)
.+.|+||+|++|..++..|...|. +|++.+.+
T Consensus 3 ~~lITGas~gIG~~~a~~l~~~G~--~V~~~~~~ 34 (267)
T TIGR02685 3 AAVVTGAAKRIGSSIAVALHQEGY--RVVLHYHR 34 (267)
T ss_pred EEEEeCCCCcHHHHHHHHHHhCCC--eEEEEcCC
Confidence 688999999999999999999887 88887543
No 496
>COG0771 MurD UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell envelope biogenesis, outer membrane]
Probab=94.37 E-value=0.22 Score=50.98 Aligned_cols=127 Identities=22% Similarity=0.238 Sum_probs=78.8
Q ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCch-hHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551 20 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV 98 (369)
Q Consensus 20 ~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~-g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~ 98 (369)
.+||+|+|- |.-|.+++..|...+. ++..+|.++.. +... ... ....+....+..+. +...++|+||..-|+
T Consensus 7 ~~kv~V~GL-G~sG~a~a~~L~~~G~--~v~v~D~~~~~~~~~~-~~~--~~~~i~~~~g~~~~-~~~~~~d~vV~SPGi 79 (448)
T COG0771 7 GKKVLVLGL-GKSGLAAARFLLKLGA--EVTVSDDRPAPEGLAA-QPL--LLEGIEVELGSHDD-EDLAEFDLVVKSPGI 79 (448)
T ss_pred CCEEEEEec-ccccHHHHHHHHHCCC--eEEEEcCCCCccchhh-hhh--hccCceeecCccch-hccccCCEEEECCCC
Confidence 689999999 9999999999999997 99999987722 1111 110 11333433333333 678999999999888
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhhh--CCCeEEEEe-cCCCCChhHHHHHHHHHhCCC
Q 017551 99 PRKPGMTRDDLFNINAGIVRTLCEGIAKC--CPNATVNLI-SNPVNSTVPIAAEVFKKAGTY 157 (369)
Q Consensus 99 p~k~g~~r~~~~~~N~~i~~~i~~~i~~~--~p~a~viv~-tNPv~~~t~i~ae~~~~~~~~ 157 (369)
|...-+ -.......++++-++--..+.. +| ||.|- ||==.++|.++++.++.. |+
T Consensus 80 ~~~~p~-v~~A~~~gi~i~~dieL~~r~~~~~p--~vaITGTNGKTTTTsli~~~l~~~-G~ 137 (448)
T COG0771 80 PPTHPL-VEAAKAAGIEIIGDIELFYRLSGEAP--IVAITGTNGKTTTTSLIAHLLKAA-GL 137 (448)
T ss_pred CCCCHH-HHHHHHcCCcEEeHHHHHHHhcCCCC--EEEEECCCchHHHHHHHHHHHHhc-CC
Confidence 753321 1122245566666665555543 33 44333 565556667776666554 44
No 497
>PRK06436 glycerate dehydrogenase; Provisional
Probab=94.37 E-value=0.17 Score=49.33 Aligned_cols=94 Identities=21% Similarity=0.320 Sum_probs=60.4
Q ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCCC
Q 017551 19 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV 98 (369)
Q Consensus 19 ~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag~ 98 (369)
..++|+|+|- |.||+.++..++.-+. +|+.||..... + .+... ..++++.++.||+|++..
T Consensus 121 ~gktvgIiG~-G~IG~~vA~~l~afG~--~V~~~~r~~~~-------~-----~~~~~--~~~l~ell~~aDiv~~~l-- 181 (303)
T PRK06436 121 YNKSLGILGY-GGIGRRVALLAKAFGM--NIYAYTRSYVN-------D-----GISSI--YMEPEDIMKKSDFVLISL-- 181 (303)
T ss_pred CCCEEEEECc-CHHHHHHHHHHHHCCC--EEEEECCCCcc-------c-----Ccccc--cCCHHHHHhhCCEEEECC--
Confidence 3579999999 9999999987776666 99999975311 0 01110 135788999999999984
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhhhCCCeEEEEec--CCCCC
Q 017551 99 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS--NPVNS 142 (369)
Q Consensus 99 p~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t--NPv~~ 142 (369)
|..+. ++ .++. .+.++..-|.+++|+++ .++|.
T Consensus 182 p~t~~-T~--------~li~--~~~l~~mk~ga~lIN~sRG~~vd~ 216 (303)
T PRK06436 182 PLTDE-TR--------GMIN--SKMLSLFRKGLAIINVARADVVDK 216 (303)
T ss_pred CCCch-hh--------cCcC--HHHHhcCCCCeEEEECCCccccCH
Confidence 32211 11 1111 23344445789999986 45544
No 498
>cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1.
Probab=94.36 E-value=0.35 Score=46.73 Aligned_cols=73 Identities=19% Similarity=0.267 Sum_probs=49.1
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCc-----h--------------hH--HHHhhcccCCCeEEEEeCC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-----P--------------GV--TADISHMDTGAVVRGFLGQ 79 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~-----~--------------g~--~~dL~~~~~~~~v~~~~~t 79 (369)
.||.|+|+ |.+|+.++..|+..|. .+|.|+|.+.. . +. +..|.......+++.+...
T Consensus 20 s~VLIvG~-gGLG~EiaKnLalaGV-g~itI~D~d~ve~snL~rqf~~~~~dIGk~Kaea~~~~L~eLNp~V~V~~~~~~ 97 (286)
T cd01491 20 SNVLISGL-GGLGVEIAKNLILAGV-KSVTLHDTKPCSWSDLSSQFYLREEDIGKNRAEASQARLAELNPYVPVTVSTGP 97 (286)
T ss_pred CcEEEEcC-CHHHHHHHHHHHHcCC-CeEEEEcCCccchhhcccCccCChHHhCHHHHHHHHHHHHHHCCCCEEEEEecc
Confidence 49999999 9999999999999985 58999998751 0 00 1112222223445544332
Q ss_pred CChhhhcCCCcEEEEcC
Q 017551 80 PQLENALTGMDLVIIPA 96 (369)
Q Consensus 80 ~dl~~al~~ADiVii~a 96 (369)
.+ ++-+.+.|+||.+.
T Consensus 98 ~~-~~~l~~fdvVV~~~ 113 (286)
T cd01491 98 LT-TDELLKFQVVVLTD 113 (286)
T ss_pred CC-HHHHhcCCEEEEec
Confidence 22 46789999998884
No 499
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.36 E-value=0.13 Score=50.01 Aligned_cols=57 Identities=18% Similarity=0.394 Sum_probs=45.8
Q ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCCchhHHHHhhcccCCCeEEEEeCCCChhhhcCCCcEEEEcCC
Q 017551 18 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG 97 (369)
Q Consensus 18 ~~~~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~~~g~~~dL~~~~~~~~v~~~~~t~dl~~al~~ADiVii~ag 97 (369)
-+.++|+|||.+|.+|.+++..|...+. +|.+++... .++.++++.||+||.+.|
T Consensus 156 ~~Gk~V~viGrs~~mG~PmA~~L~~~g~--tVtv~~~rT-----------------------~~l~e~~~~ADIVIsavg 210 (296)
T PRK14188 156 LSGLNAVVIGRSNLVGKPMAQLLLAANA--TVTIAHSRT-----------------------RDLPAVCRRADILVAAVG 210 (296)
T ss_pred CCCCEEEEEcCCcchHHHHHHHHHhCCC--EEEEECCCC-----------------------CCHHHHHhcCCEEEEecC
Confidence 4567999999889999999999998887 888885321 135678899999999876
Q ss_pred CC
Q 017551 98 VP 99 (369)
Q Consensus 98 ~p 99 (369)
.|
T Consensus 211 ~~ 212 (296)
T PRK14188 211 RP 212 (296)
T ss_pred Ch
Confidence 55
No 500
>PRK06483 dihydromonapterin reductase; Provisional
Probab=94.36 E-value=0.51 Score=43.12 Aligned_cols=34 Identities=21% Similarity=0.134 Sum_probs=30.9
Q ss_pred CEEEEEcCCCccHHHHHHHHHhCCCCcEEEEEeCCC
Q 017551 21 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN 56 (369)
Q Consensus 21 ~KI~IiGA~G~vGs~la~~l~~~~~~~el~L~D~~~ 56 (369)
+.+.|+||+|++|..++..|+.++. +|++.|.+.
T Consensus 3 k~vlItGas~gIG~~ia~~l~~~G~--~V~~~~r~~ 36 (236)
T PRK06483 3 APILITGAGQRIGLALAWHLLAQGQ--PVIVSYRTH 36 (236)
T ss_pred ceEEEECCCChHHHHHHHHHHHCCC--eEEEEeCCc
Confidence 4799999999999999999999887 899999875
Done!