Your job contains 1 sequence.
>017553
MARTAIGCEPLVGSLTPSKKREYRVTNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNRV
TVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKL
HKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSV
DFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHS
NYVDCNRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCD
FHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGA
IWRWDAIPT
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 017553
(369 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2091876 - symbol:FIE "AT3G20740" species:3702 ... 1602 1.3e-164 1
UNIPROTKB|Q3SZ25 - symbol:EED "Polycomb protein EED" spec... 744 1.1e-73 1
UNIPROTKB|F1PP86 - symbol:EED "Uncharacterized protein" s... 744 1.1e-73 1
UNIPROTKB|O75530 - symbol:EED "Polycomb protein EED" spec... 744 1.1e-73 1
MGI|MGI:95286 - symbol:Eed "embryonic ectoderm developmen... 744 1.1e-73 1
RGD|1309782 - symbol:Eed "embryonic ectoderm development"... 744 1.1e-73 1
UNIPROTKB|Q8UUP2 - symbol:eed-a "Polycomb protein eed-A" ... 743 1.4e-73 1
UNIPROTKB|F1P0V7 - symbol:EED "Polycomb protein EED" spec... 742 1.7e-73 1
UNIPROTKB|Q5ZKH3 - symbol:EED "Polycomb protein EED" spec... 742 1.7e-73 1
UNIPROTKB|Q6AZS2 - symbol:eed-b "Polycomb protein eed-B" ... 733 1.6e-72 1
ZFIN|ZDB-GENE-050417-287 - symbol:eed "embryonic ectoderm... 732 2.0e-72 1
UNIPROTKB|Q28DT7 - symbol:eed "Polycomb protein eed" spec... 730 3.2e-72 1
FB|FBgn0000588 - symbol:esc "extra sexcombs" species:7227... 706 1.1e-69 1
FB|FBgn0032391 - symbol:escl "escl" species:7227 "Drosoph... 704 1.8e-69 1
UNIPROTKB|Q26458 - symbol:esc "Polycomb protein esc" spec... 704 1.8e-69 1
WB|WBGene00003224 - symbol:mes-6 species:6239 "Caenorhabd... 225 4.5e-24 2
UNIPROTKB|E9PMU3 - symbol:EED "Polycomb protein EED" spec... 219 9.9e-18 1
DICTYBASE|DDB_G0282189 - symbol:tupA "transcriptional rep... 142 1.1e-10 2
UNIPROTKB|Q32SG6 - symbol:Q32SG6 "Protein HIRA" species:4... 128 2.9e-09 2
UNIPROTKB|B4DF38 - symbol:PAFAH1B1 "Platelet-activating f... 148 3.1e-09 1
UNIPROTKB|I3L2U8 - symbol:PAFAH1B1 "Platelet-activating f... 143 4.2e-09 2
UNIPROTKB|Q9PTR5 - symbol:PAFAH1B1 "Lissencephaly-1 homol... 144 5.1e-09 2
UNIPROTKB|I3L3N5 - symbol:PAFAH1B1 "Platelet-activating f... 148 5.4e-09 1
UNIPROTKB|F1RJ54 - symbol:WSB1 "Uncharacterized protein" ... 133 5.9e-09 2
UNIPROTKB|A5D7P3 - symbol:PAFAH1B1 "Platelet-activating f... 143 8.5e-09 2
UNIPROTKB|E2QY31 - symbol:PAFAH1B1 "Uncharacterized prote... 143 8.5e-09 2
UNIPROTKB|J9P388 - symbol:PAFAH1B1 "Uncharacterized prote... 143 8.5e-09 2
UNIPROTKB|P43034 - symbol:PAFAH1B1 "Platelet-activating f... 143 8.5e-09 2
UNIPROTKB|F2Z521 - symbol:PAFAH1B1 "Platelet-activating f... 143 8.5e-09 2
MGI|MGI:109520 - symbol:Pafah1b1 "platelet-activating fac... 143 8.5e-09 2
RGD|620331 - symbol:Pafah1b1 "platelet-activating factor ... 143 8.5e-09 2
UNIPROTKB|P63004 - symbol:Pafah1b1 "Platelet-activating f... 143 8.5e-09 2
UNIPROTKB|P43033 - symbol:PAFAH1B1 "Platelet-activating f... 143 8.5e-09 2
UNIPROTKB|E2RFV0 - symbol:WSB1 "Uncharacterized protein" ... 134 9.3e-09 2
UNIPROTKB|Q9Y6I7 - symbol:WSB1 "WD repeat and SOCS box-co... 134 9.3e-09 2
UNIPROTKB|E1BBZ9 - symbol:WSB1 "Uncharacterized protein" ... 134 1.5e-08 2
GENEDB_PFALCIPARUM|PFC0100c - symbol:PFC0100c "regulatory... 159 1.8e-08 1
UNIPROTKB|O97334 - symbol:PFC0100c "Regulatory protein, p... 159 1.8e-08 1
UNIPROTKB|Q9GL51 - symbol:PAFAH1B1 "Platelet-activating f... 140 1.9e-08 2
MGI|MGI:1926139 - symbol:Wsb1 "WD repeat and SOCS box-con... 132 2.0e-08 2
RGD|1310215 - symbol:Taf5l "TAF5-like RNA polymerase II, ... 115 2.0e-08 2
UNIPROTKB|Q6PBD6 - symbol:wdr61 "WD repeat-containing pro... 153 2.1e-08 1
UNIPROTKB|F1RKU4 - symbol:WDR61 "Uncharacterized protein"... 152 2.2e-08 1
UNIPROTKB|H0YN81 - symbol:WDR61 "WD repeat-containing pro... 152 2.4e-08 1
UNIPROTKB|Q32LN7 - symbol:WDR61 "WD repeat-containing pro... 152 2.7e-08 1
UNIPROTKB|E2RBV0 - symbol:WDR61 "Uncharacterized protein"... 152 2.7e-08 1
UNIPROTKB|Q9GZS3 - symbol:WDR61 "WD repeat-containing pro... 152 2.7e-08 1
TAIR|locus:2194060 - symbol:ATARCA "AT1G18080" species:37... 147 3.0e-08 2
UNIPROTKB|A8X8C6 - symbol:tag-125 "WD repeat-containing p... 131 3.3e-08 2
UNIPROTKB|F1SIZ2 - symbol:POC1A "Uncharacterized protein"... 152 4.5e-08 1
UNIPROTKB|Q6GMD2 - symbol:wdr61 "WD repeat-containing pro... 150 4.7e-08 1
ZFIN|ZDB-GENE-040426-1851 - symbol:wdr61 "WD repeat domai... 150 4.7e-08 1
POMBASE|SPAC6B12.15 - symbol:cpc2 "RACK1 ortholog Cpc2" s... 135 4.9e-08 2
ZFIN|ZDB-GENE-040808-14 - symbol:thoc3 "THO complex 3" sp... 137 5.1e-08 2
UNIPROTKB|Q2TBP4 - symbol:POC1A "POC1 centriolar protein ... 152 5.6e-08 1
UNIPROTKB|E9PFC6 - symbol:POC1A "POC1 centriolar protein ... 151 5.9e-08 2
TAIR|locus:2008159 - symbol:RACK1B_AT "AT1G48630" species... 147 6.1e-08 2
MGI|MGI:1917493 - symbol:Wdr61 "WD repeat domain 61" spec... 149 6.2e-08 1
TAIR|locus:2092707 - symbol:RACK1C_AT "AT3G18130" species... 144 6.7e-08 2
UNIPROTKB|D6RFX4 - symbol:GNB2L1 "Guanine nucleotide-bind... 130 7.0e-08 2
TAIR|locus:2016214 - symbol:AT1G79990 species:3702 "Arabi... 157 7.3e-08 1
RGD|1308228 - symbol:Wdr61 "WD repeat domain 61" species:... 148 8.0e-08 1
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 130 8.4e-08 2
UNIPROTKB|Q8NBT0 - symbol:POC1A "POC1 centriolar protein ... 151 8.9e-08 2
POMBASE|SPAC630.14c - symbol:tup12 "transcriptional corep... 131 9.4e-08 2
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 135 1.1e-07 2
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 130 1.2e-07 2
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 130 1.2e-07 2
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 130 1.2e-07 2
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 130 1.2e-07 2
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 130 1.2e-07 2
UNIPROTKB|Q29RH4 - symbol:THOC3 "THO complex subunit 3" s... 136 1.2e-07 2
UNIPROTKB|E2RC43 - symbol:THOC3 "Uncharacterized protein"... 136 1.2e-07 2
UNIPROTKB|Q96J01 - symbol:THOC3 "THO complex subunit 3" s... 136 1.2e-07 2
UNIPROTKB|F1S386 - symbol:THOC3 "Uncharacterized protein"... 136 1.2e-07 2
MGI|MGI:1920916 - symbol:Thoc3 "THO complex 3" species:10... 136 1.2e-07 2
RGD|1311669 - symbol:Thoc3 "THO complex 3" species:10116 ... 136 1.2e-07 2
RGD|1565004 - symbol:Poc1a "POC1 centriolar protein homol... 147 1.2e-07 1
WB|WBGene00006474 - symbol:wdr-5.1 species:6239 "Caenorha... 136 1.3e-07 2
UNIPROTKB|Q17963 - symbol:tag-125 "WD repeat-containing p... 136 1.3e-07 2
POMBASE|SPAC18B11.10 - symbol:tup11 "transcriptional core... 143 1.3e-07 2
ZFIN|ZDB-GENE-040116-3 - symbol:pafah1b1b "platelet-activ... 137 1.3e-07 2
UNIPROTKB|F1NFT8 - symbol:WDR61 "WD repeat-containing pro... 146 1.4e-07 1
UNIPROTKB|Q5ZJH5 - symbol:WDR61 "WD repeat-containing pro... 146 1.4e-07 1
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 130 1.5e-07 2
DICTYBASE|DDB_G0283581 - symbol:utp15 "U3 snoRNP protein"... 150 1.5e-07 1
DICTYBASE|DDB_G0288375 - symbol:lis1 "lissencephaly-1 hom... 124 1.5e-07 3
FB|FBgn0027524 - symbol:CG3909 species:7227 "Drosophila m... 146 1.7e-07 1
CGD|CAL0005939 - symbol:TUP1 species:5476 "Candida albica... 134 1.9e-07 2
UNIPROTKB|P0CY34 - symbol:TUP1 "Transcriptional repressor... 134 1.9e-07 2
UNIPROTKB|F1MLP7 - symbol:SNRNP40 "U5 small nuclear ribon... 115 1.9e-07 2
UNIPROTKB|F1SVA6 - symbol:SNRNP40 "Uncharacterized protei... 115 1.9e-07 2
MGI|MGI:1913835 - symbol:Snrnp40 "small nuclear ribonucle... 114 1.9e-07 2
SGD|S000001885 - symbol:CDC4 "F-box protein required for ... 152 2.2e-07 3
UNIPROTKB|Q2HJH6 - symbol:SNRNP40 "U5 small nuclear ribon... 115 2.4e-07 2
TAIR|locus:2169769 - symbol:AT5G24320 "AT5G24320" species... 138 2.5e-07 2
WB|WBGene00003009 - symbol:lin-23 species:6239 "Caenorhab... 130 2.6e-07 2
UNIPROTKB|Q09990 - symbol:lin-23 "F-box/WD repeat-contain... 130 2.6e-07 2
MGI|MGI:1917485 - symbol:Poc1a "POC1 centriolar protein h... 146 2.6e-07 1
RGD|1309121 - symbol:Fbxw11 "F-box and WD repeat domain c... 132 2.8e-07 2
WARNING: Descriptions of 374 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2091876 [details] [associations]
symbol:FIE "AT3G20740" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043078 "polar nucleus" evidence=IDA] [GO:2000014
"regulation of endosperm development" evidence=IMP] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0000003 "reproduction" evidence=IMP] [GO:0006349
"regulation of gene expression by genetic imprinting"
evidence=RCA;IMP] [GO:0016571 "histone methylation"
evidence=RCA;IMP] [GO:0009409 "response to cold" evidence=IEP]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISS]
[GO:0010048 "vernalization response" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007275 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009409 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0006351 GO:GO:0043078 GO:GO:0006349
GO:GO:2000014 GO:GO:0016571 KO:K11462 HOGENOM:HOG000005759
OMA:CTTLTHP EMBL:AB025629 EMBL:AF129516 EMBL:AK117114 EMBL:BT005326
IPI:IPI00544225 RefSeq:NP_188710.1 UniGene:At.20884
UniGene:At.74826 ProteinModelPortal:Q9LT47 SMR:Q9LT47
DIP:DIP-31378N IntAct:Q9LT47 STRING:Q9LT47 PaxDb:Q9LT47
PRIDE:Q9LT47 EnsemblPlants:AT3G20740.1 GeneID:821622
KEGG:ath:AT3G20740 GeneFarm:2279 TAIR:At3g20740 eggNOG:NOG275229
InParanoid:Q9LT47 PhylomeDB:Q9LT47 ProtClustDB:CLSN2685055
Genevestigator:Q9LT47 GermOnline:AT3G20740 Uniprot:Q9LT47
Length = 369
Score = 1602 (569.0 bits), Expect = 1.3e-164, P = 1.3e-164
Identities = 281/367 (76%), Positives = 327/367 (89%)
Query: 1 MARTAIGCEPLVGSLTPSKKREYRVTNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNRV 60
M++ +G E +VGSLTPS K+ Y+VTN++QEGK+PLYAVVFNF+D+R+F+VF T GGNR+
Sbjct: 1 MSKITLGNESIVGSLTPSNKKSYKVTNRIQEGKKPLYAVVFNFLDARFFDVFVTAGGNRI 60
Query: 61 TVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKL 120
T+Y CL G I+ALQSY DEDKEESFYTVSWAC V+G P++ AGG+ GIIRVIDV++E +
Sbjct: 61 TLYNCLGDGAISALQSYADEDKEESFYTVSWACGVNGNPYVAAGGVKGIIRVIDVNSETI 120
Query: 121 HKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSV 180
HKS VGHGDS+NEIRTQPLKP LV++ASKDESVRLWNV+TGICILIFAGAGGHR EVLSV
Sbjct: 121 HKSLVGHGDSVNEIRTQPLKPQLVITASKDESVRLWNVETGICILIFAGAGGHRYEVLSV 180
Query: 181 DFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHS 240
DFHPSDIYR ASCGMD T+KIWSMKEFWTYVEKSFTWTD PSKFPTK+VQFPVF AS+H+
Sbjct: 181 DFHPSDIYRFASCGMDTTIKIWSMKEFWTYVEKSFTWTDDPSKFPTKFVQFPVFTASIHT 240
Query: 241 NYVDCNRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCD 300
NYVDCNRW GDFILSKSVDNEI+LWEP++KE SPGEG +D+L +YPVP CDIWFIKFSCD
Sbjct: 241 NYVDCNRWFGDFILSKSVDNEILLWEPQLKENSPGEGASDVLLRYPVPMCDIWFIKFSCD 300
Query: 301 FHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGA 360
H ++ AIGN+EGK++VW+L+S PPVLI +LSH QSKS IRQTAMS DGSTIL+CCEDG
Sbjct: 301 LHLSSVAIGNQEGKVYVWDLKSCPPVLITKLSHNQSKSVIRQTAMSVDGSTILACCEDGT 360
Query: 361 IWRWDAI 367
IWRWD I
Sbjct: 361 IWRWDVI 367
>UNIPROTKB|Q3SZ25 [details] [associations]
symbol:EED "Polycomb protein EED" species:9913 "Bos taurus"
[GO:0035098 "ESC/E(Z) complex" evidence=ISS] [GO:0045120
"pronucleus" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0042054 "histone methyltransferase activity"
evidence=IEA] [GO:0006349 "regulation of gene expression by genetic
imprinting" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001739 "sex chromatin" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006351 GO:GO:0003682
GO:GO:0035098 GO:GO:0042054 GO:GO:0006349 GO:GO:0045120
HOVERGEN:HBG052708 KO:K11462 EMBL:BC103217 IPI:IPI00760407
RefSeq:NP_001035584.1 UniGene:Bt.49104 ProteinModelPortal:Q3SZ25
SMR:Q3SZ25 STRING:Q3SZ25 Ensembl:ENSBTAT00000010324 GeneID:404183
KEGG:bta:404183 CTD:8726 GeneTree:ENSGT00510000047334
HOGENOM:HOG000005759 InParanoid:Q3SZ25 OMA:CTTLTHP
OrthoDB:EOG4001J7 NextBio:20817612 ArrayExpress:Q3SZ25
GO:GO:0001739 Uniprot:Q3SZ25
Length = 441
Score = 744 (267.0 bits), Expect = 1.1e-73, P = 1.1e-73
Identities = 156/372 (41%), Positives = 231/372 (62%)
Query: 18 SKKREY--RVTNKLQEG-KRPLYAVVFNFIDSRYFN--VFATVGGNRVTVYQCLEGGVIA 72
SKK +Y + N L+E +PL+ V FN+ S+ + VFATVG NRVT+Y+C G I
Sbjct: 75 SKKCKYSFKCVNSLKEDHNQPLFGVQFNW-HSKEGDPLVFATVGSNRVTLYECHSQGEIR 133
Query: 73 ALQSYVDEDKEESFYTVSWACNVD-GIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSI 131
LQSYVD D +E+FYT +W + + P L G GIIR+I+ + K +VGHG++I
Sbjct: 134 LLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAI 193
Query: 132 NEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIY--R 189
NE++ P P+L++S SKD ++RLWN+QT + IF G GHR+EVLS D+ D+ +
Sbjct: 194 NELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADY---DLLGEK 250
Query: 190 IASCGMDNTVKIWSM--KEFWTYVEKSFTWTDLPSK----FPTKYVQFPVFIA-SVHSNY 242
I SCGMD+++K+W + K +++S+ + P+K F ++ + FP F +H NY
Sbjct: 251 IMSCGMDHSLKLWRINSKRMMNAIKESYDYN--PNKTNRPFISQKIHFPDFSTRDIHRNY 308
Query: 243 VDCNRWLGDFILSKSVDNEIVLWEP-KMKEQ----SPGEGTADILQKYPVPECDIWFIKF 297
VDC RWLGD ILSKS +N IV W+P KM++ P E IL ++ +CDIW+++F
Sbjct: 309 VDCVRWLGDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRF 368
Query: 298 SCDFHYNAAAIGNREGKIFVWELQSSPP--VLIARLSHAQSKSPIRQTAMSYDGSTILSC 355
S DF A+GN+ GK++VW+L+ P L+H + + IRQT+ S D S +++
Sbjct: 369 SMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAV 428
Query: 356 CEDGAIWRWDAI 367
C+D +IWRWD +
Sbjct: 429 CDDASIWRWDRL 440
>UNIPROTKB|F1PP86 [details] [associations]
symbol:EED "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045120 "pronucleus" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0042054
"histone methyltransferase activity" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] [GO:0006349 "regulation of gene
expression by genetic imprinting" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001739 "sex chromatin"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003682 GO:GO:0042054 GO:GO:0006349
GO:GO:0045120 KO:K11462 CTD:8726 GeneTree:ENSGT00510000047334
OMA:CTTLTHP GO:GO:0001739 EMBL:AAEX03012752 RefSeq:XP_857750.1
ProteinModelPortal:F1PP86 Ensembl:ENSCAFT00000007206 GeneID:476779
KEGG:cfa:476779 Uniprot:F1PP86
Length = 441
Score = 744 (267.0 bits), Expect = 1.1e-73, P = 1.1e-73
Identities = 156/372 (41%), Positives = 231/372 (62%)
Query: 18 SKKREY--RVTNKLQEG-KRPLYAVVFNFIDSRYFN--VFATVGGNRVTVYQCLEGGVIA 72
SKK +Y + N L+E +PL+ V FN+ S+ + VFATVG NRVT+Y+C G I
Sbjct: 75 SKKCKYSFKCVNSLKEDHNQPLFGVQFNW-HSKEGDPLVFATVGSNRVTLYECHSQGEIR 133
Query: 73 ALQSYVDEDKEESFYTVSWACNVD-GIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSI 131
LQSYVD D +E+FYT +W + + P L G GIIR+I+ + K +VGHG++I
Sbjct: 134 LLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAI 193
Query: 132 NEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIY--R 189
NE++ P P+L++S SKD ++RLWN+QT + IF G GHR+EVLS D+ D+ +
Sbjct: 194 NELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADY---DLLGEK 250
Query: 190 IASCGMDNTVKIWSM--KEFWTYVEKSFTWTDLPSK----FPTKYVQFPVFIA-SVHSNY 242
I SCGMD+++K+W + K +++S+ + P+K F ++ + FP F +H NY
Sbjct: 251 IMSCGMDHSLKLWRINSKRMMNAIKESYDYN--PNKTNRPFISQKIHFPDFSTRDIHRNY 308
Query: 243 VDCNRWLGDFILSKSVDNEIVLWEP-KMKEQ----SPGEGTADILQKYPVPECDIWFIKF 297
VDC RWLGD ILSKS +N IV W+P KM++ P E IL ++ +CDIW+++F
Sbjct: 309 VDCVRWLGDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRF 368
Query: 298 SCDFHYNAAAIGNREGKIFVWELQSSPP--VLIARLSHAQSKSPIRQTAMSYDGSTILSC 355
S DF A+GN+ GK++VW+L+ P L+H + + IRQT+ S D S +++
Sbjct: 369 SMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAV 428
Query: 356 CEDGAIWRWDAI 367
C+D +IWRWD +
Sbjct: 429 CDDASIWRWDRL 440
>UNIPROTKB|O75530 [details] [associations]
symbol:EED "Polycomb protein EED" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0001739 "sex chromatin" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0006349 "regulation of gene expression
by genetic imprinting" evidence=IEA] [GO:0045120 "pronucleus"
evidence=IEA] [GO:0005634 "nucleus" evidence=NAS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=NAS]
[GO:0035098 "ESC/E(Z) complex" evidence=IDA] [GO:0042054 "histone
methyltransferase activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0042802 "identical protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0045892 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 EMBL:CH471076
GO:GO:0006351 GO:GO:0003682 GO:GO:0035098 GO:GO:0042054
GO:GO:0006349 GO:GO:0045120 HOVERGEN:HBG052708 KO:K11462 CTD:8726
OMA:CTTLTHP OrthoDB:EOG4001J7 GO:GO:0001739 EMBL:AF080227
EMBL:AF070418 EMBL:U90651 EMBL:AF099032 EMBL:AK292120 EMBL:AP003084
EMBL:BC047672 EMBL:BC068995 EMBL:AF078933 IPI:IPI00171248
IPI:IPI00395515 IPI:IPI00432040 RefSeq:NP_003788.2
RefSeq:NP_694536.1 UniGene:Hs.503510 PDB:3IIW PDB:3IIY PDB:3IJ0
PDB:3IJ1 PDB:3IJC PDB:3JPX PDB:3JZG PDB:3JZH PDB:3JZN PDB:3K26
PDB:3K27 PDBsum:3IIW PDBsum:3IIY PDBsum:3IJ0 PDBsum:3IJ1
PDBsum:3IJC PDBsum:3JPX PDBsum:3JZG PDBsum:3JZH PDBsum:3JZN
PDBsum:3K26 PDBsum:3K27 ProteinModelPortal:O75530 SMR:O75530
DIP:DIP-36673N IntAct:O75530 STRING:O75530 PhosphoSite:O75530
PaxDb:O75530 PRIDE:O75530 DNASU:8726 Ensembl:ENST00000263360
Ensembl:ENST00000327320 Ensembl:ENST00000351625 GeneID:8726
KEGG:hsa:8726 UCSC:uc001pbp.3 UCSC:uc001pbr.3 GeneCards:GC11P085955
HGNC:HGNC:3188 MIM:605984 neXtProt:NX_O75530 PharmGKB:PA27624
ChiTaRS:EED EvolutionaryTrace:O75530 GenomeRNAi:8726 NextBio:32733
ArrayExpress:O75530 Bgee:O75530 CleanEx:HS_EED
Genevestigator:O75530 Uniprot:O75530
Length = 441
Score = 744 (267.0 bits), Expect = 1.1e-73, P = 1.1e-73
Identities = 156/372 (41%), Positives = 231/372 (62%)
Query: 18 SKKREY--RVTNKLQEG-KRPLYAVVFNFIDSRYFN--VFATVGGNRVTVYQCLEGGVIA 72
SKK +Y + N L+E +PL+ V FN+ S+ + VFATVG NRVT+Y+C G I
Sbjct: 75 SKKCKYSFKCVNSLKEDHNQPLFGVQFNW-HSKEGDPLVFATVGSNRVTLYECHSQGEIR 133
Query: 73 ALQSYVDEDKEESFYTVSWACNVD-GIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSI 131
LQSYVD D +E+FYT +W + + P L G GIIR+I+ + K +VGHG++I
Sbjct: 134 LLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAI 193
Query: 132 NEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIY--R 189
NE++ P P+L++S SKD ++RLWN+QT + IF G GHR+EVLS D+ D+ +
Sbjct: 194 NELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADY---DLLGEK 250
Query: 190 IASCGMDNTVKIWSM--KEFWTYVEKSFTWTDLPSK----FPTKYVQFPVFIA-SVHSNY 242
I SCGMD+++K+W + K +++S+ + P+K F ++ + FP F +H NY
Sbjct: 251 IMSCGMDHSLKLWRINSKRMMNAIKESYDYN--PNKTNRPFISQKIHFPDFSTRDIHRNY 308
Query: 243 VDCNRWLGDFILSKSVDNEIVLWEP-KMKEQ----SPGEGTADILQKYPVPECDIWFIKF 297
VDC RWLGD ILSKS +N IV W+P KM++ P E IL ++ +CDIW+++F
Sbjct: 309 VDCVRWLGDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRF 368
Query: 298 SCDFHYNAAAIGNREGKIFVWELQSSPP--VLIARLSHAQSKSPIRQTAMSYDGSTILSC 355
S DF A+GN+ GK++VW+L+ P L+H + + IRQT+ S D S +++
Sbjct: 369 SMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAV 428
Query: 356 CEDGAIWRWDAI 367
C+D +IWRWD +
Sbjct: 429 CDDASIWRWDRL 440
>MGI|MGI:95286 [details] [associations]
symbol:Eed "embryonic ectoderm development" species:10090 "Mus
musculus" [GO:0001739 "sex chromatin" evidence=IDA] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005694
"chromosome" evidence=IEA] [GO:0006349 "regulation of gene
expression by genetic imprinting" evidence=IMP] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016571
"histone methylation" evidence=IMP] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO;IDA] [GO:0042054 "histone methyltransferase activity"
evidence=ISO] [GO:0042802 "identical protein binding" evidence=ISO]
[GO:0045120 "pronucleus" evidence=IDA] [GO:0061087 "positive
regulation of histone H3-K27 methylation" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:95286 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006351
GO:GO:0003682 GO:GO:0035098 GO:GO:0042054 GO:GO:0006349
GO:GO:0045120 GO:GO:0016571 HOVERGEN:HBG052708 KO:K11462 CTD:8726
GeneTree:ENSGT00510000047334 HOGENOM:HOG000005759 OMA:CTTLTHP
OrthoDB:EOG4001J7 GO:GO:0001739 EMBL:U78103 EMBL:U97675
EMBL:AK077664 EMBL:AK131976 EMBL:AK133890 EMBL:BC012966
IPI:IPI00312600 IPI:IPI00900431 IPI:IPI00900437 RefSeq:NP_068676.1
UniGene:Mm.380914 PDB:2QXV PDBsum:2QXV ProteinModelPortal:Q921E6
SMR:Q921E6 DIP:DIP-29523N IntAct:Q921E6 STRING:Q921E6
PhosphoSite:Q921E6 PaxDb:Q921E6 PRIDE:Q921E6
Ensembl:ENSMUST00000107234 GeneID:13626 KEGG:mmu:13626
UCSC:uc009igk.2 InParanoid:Q921E6 EvolutionaryTrace:Q921E6
NextBio:284300 Bgee:Q921E6 Genevestigator:Q921E6 Uniprot:Q921E6
Length = 441
Score = 744 (267.0 bits), Expect = 1.1e-73, P = 1.1e-73
Identities = 156/372 (41%), Positives = 231/372 (62%)
Query: 18 SKKREY--RVTNKLQEG-KRPLYAVVFNFIDSRYFN--VFATVGGNRVTVYQCLEGGVIA 72
SKK +Y + N L+E +PL+ V FN+ S+ + VFATVG NRVT+Y+C G I
Sbjct: 75 SKKCKYSFKCVNSLKEDHNQPLFGVQFNW-HSKEGDPLVFATVGSNRVTLYECHSQGEIR 133
Query: 73 ALQSYVDEDKEESFYTVSWACNVD-GIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSI 131
LQSYVD D +E+FYT +W + + P L G GIIR+I+ + K +VGHG++I
Sbjct: 134 LLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAI 193
Query: 132 NEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIY--R 189
NE++ P P+L++S SKD ++RLWN+QT + IF G GHR+EVLS D+ D+ +
Sbjct: 194 NELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADY---DLLGEK 250
Query: 190 IASCGMDNTVKIWSM--KEFWTYVEKSFTWTDLPSK----FPTKYVQFPVFIA-SVHSNY 242
I SCGMD+++K+W + K +++S+ + P+K F ++ + FP F +H NY
Sbjct: 251 IMSCGMDHSLKLWRINSKRMMNAIKESYDYN--PNKTNRPFISQKIHFPDFSTRDIHRNY 308
Query: 243 VDCNRWLGDFILSKSVDNEIVLWEP-KMKEQ----SPGEGTADILQKYPVPECDIWFIKF 297
VDC RWLGD ILSKS +N IV W+P KM++ P E IL ++ +CDIW+++F
Sbjct: 309 VDCVRWLGDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRF 368
Query: 298 SCDFHYNAAAIGNREGKIFVWELQSSPP--VLIARLSHAQSKSPIRQTAMSYDGSTILSC 355
S DF A+GN+ GK++VW+L+ P L+H + + IRQT+ S D S +++
Sbjct: 369 SMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAV 428
Query: 356 CEDGAIWRWDAI 367
C+D +IWRWD +
Sbjct: 429 CDDASIWRWDRL 440
>RGD|1309782 [details] [associations]
symbol:Eed "embryonic ectoderm development" species:10116
"Rattus norvegicus" [GO:0001739 "sex chromatin" evidence=IEA;ISO]
[GO:0003682 "chromatin binding" evidence=IEA;ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0006349 "regulation of gene expression
by genetic imprinting" evidence=IEA;ISO] [GO:0016571 "histone
methylation" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=IEA;ISO] [GO:0042054 "histone methyltransferase activity"
evidence=IEA;ISO] [GO:0042802 "identical protein binding"
evidence=IEA;ISO] [GO:0045120 "pronucleus" evidence=IEA;ISO]
[GO:0061087 "positive regulation of histone H3-K27 methylation"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1309782 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003682 GO:GO:0042054
GO:GO:0006349 GO:GO:0045120 GeneTree:ENSGT00510000047334
GO:GO:0001739 IPI:IPI00869787 Ensembl:ENSRNOT00000024082
UCSC:RGD:1309782 ArrayExpress:F1LMC5 Uniprot:F1LMC5
Length = 500
Score = 744 (267.0 bits), Expect = 1.1e-73, P = 1.1e-73
Identities = 156/372 (41%), Positives = 231/372 (62%)
Query: 18 SKKREY--RVTNKLQEG-KRPLYAVVFNFIDSRYFN--VFATVGGNRVTVYQCLEGGVIA 72
SKK +Y + N L+E +PL+ V FN+ S+ + VFATVG NRVT+Y+C G I
Sbjct: 134 SKKCKYSFKCVNSLKEDHNQPLFGVQFNW-HSKEGDPLVFATVGSNRVTLYECHSQGEIR 192
Query: 73 ALQSYVDEDKEESFYTVSWACNVD-GIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSI 131
LQSYVD D +E+FYT +W + + P L G GIIR+I+ + K +VGHG++I
Sbjct: 193 LLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAI 252
Query: 132 NEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIY--R 189
NE++ P P+L++S SKD ++RLWN+QT + IF G GHR+EVLS D+ D+ +
Sbjct: 253 NELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADY---DLLGEK 309
Query: 190 IASCGMDNTVKIWSM--KEFWTYVEKSFTWTDLPSK----FPTKYVQFPVFIA-SVHSNY 242
I SCGMD+++K+W + K +++S+ + P+K F ++ + FP F +H NY
Sbjct: 310 IMSCGMDHSLKLWRINSKRMMNAIKESYDYN--PNKTNRPFISQKIHFPDFSTRDIHRNY 367
Query: 243 VDCNRWLGDFILSKSVDNEIVLWEP-KMKEQ----SPGEGTADILQKYPVPECDIWFIKF 297
VDC RWLGD ILSKS +N IV W+P KM++ P E IL ++ +CDIW+++F
Sbjct: 368 VDCVRWLGDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRF 427
Query: 298 SCDFHYNAAAIGNREGKIFVWELQSSPP--VLIARLSHAQSKSPIRQTAMSYDGSTILSC 355
S DF A+GN+ GK++VW+L+ P L+H + + IRQT+ S D S +++
Sbjct: 428 SMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAV 487
Query: 356 CEDGAIWRWDAI 367
C+D +IWRWD +
Sbjct: 488 CDDASIWRWDRL 499
>UNIPROTKB|Q8UUP2 [details] [associations]
symbol:eed-a "Polycomb protein eed-A" species:8355 "Xenopus
laevis" [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006351 GO:GO:0016568 GO:GO:0035098
EMBL:AJ421945 EMBL:BC077511 EMBL:BC097778 RefSeq:NP_001089517.1
UniGene:Xl.5897 ProteinModelPortal:Q8UUP2 SMR:Q8UUP2 GeneID:734571
KEGG:xla:734571 CTD:734571 Xenbase:XB-GENE-6255887
HOVERGEN:HBG052708 KO:K11462 Uniprot:Q8UUP2
Length = 438
Score = 743 (266.6 bits), Expect = 1.4e-73, P = 1.4e-73
Identities = 156/372 (41%), Positives = 231/372 (62%)
Query: 18 SKKREY--RVTNKLQEG-KRPLYAVVFNFIDSRYFN--VFATVGGNRVTVYQCLEGGVIA 72
SKK +Y + N L+E +PL+ V FN+ S+ + VFATVG NRVT+Y+C G I
Sbjct: 72 SKKCKYSFKCVNSLKEDHNQPLFGVQFNW-HSKEGDPLVFATVGSNRVTLYECHPQGDIR 130
Query: 73 ALQSYVDEDKEESFYTVSWACNVD-GIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSI 131
LQSYVD D +E+FYT +W + + P L G GIIR+I+ + K +VGHG++I
Sbjct: 131 LLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAI 190
Query: 132 NEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIY--R 189
NE++ P P+L++S SKD ++RLWN+QT + IF G GHR+EVLS D+ D+ +
Sbjct: 191 NELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADY---DLLGEK 247
Query: 190 IASCGMDNTVKIWSMKEFW--TYVEKSFTWTDLPSK----FPTKYVQFPVFIA-SVHSNY 242
I SCGMD+++K+W + T +++S+ + PSK F ++ + FP F +H NY
Sbjct: 248 IMSCGMDHSLKLWRINSLRMKTAIKESYEYN--PSKTNRPFVSQKIHFPDFSTRDIHRNY 305
Query: 243 VDCNRWLGDFILSKSVDNEIVLWEP-KMKEQ----SPGEGTADILQKYPVPECDIWFIKF 297
VDC RWLGD ILSKS +N IV W+P KM++ P E IL ++ +CDIW+++F
Sbjct: 306 VDCVRWLGDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRF 365
Query: 298 SCDFHYNAAAIGNREGKIFVWELQSSPP--VLIARLSHAQSKSPIRQTAMSYDGSTILSC 355
S DF A+GN+ GK++VW+L++ P L++ + S +RQT+ S D S +++
Sbjct: 366 SMDFWQKMLALGNQVGKLYVWDLEAEDPHKAKCTTLTYPKCASAVRQTSFSRDSSILVAV 425
Query: 356 CEDGAIWRWDAI 367
C+D IWRWD +
Sbjct: 426 CDDATIWRWDRL 437
>UNIPROTKB|F1P0V7 [details] [associations]
symbol:EED "Polycomb protein EED" species:9031 "Gallus
gallus" [GO:0001739 "sex chromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0006349 "regulation of gene
expression by genetic imprinting" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] [GO:0042054 "histone
methyltransferase activity" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0045120 "pronucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003682 GO:GO:0042054 GO:GO:0006349
GO:GO:0045120 GeneTree:ENSGT00510000047334 OMA:CTTLTHP
GO:GO:0001739 EMBL:AADN02004576 IPI:IPI00593157
Ensembl:ENSGALT00000001824 ArrayExpress:F1P0V7 Uniprot:F1P0V7
Length = 464
Score = 742 (266.3 bits), Expect = 1.7e-73, P = 1.7e-73
Identities = 156/372 (41%), Positives = 231/372 (62%)
Query: 18 SKKREY--RVTNKLQEGK-RPLYAVVFNFIDSRYFN--VFATVGGNRVTVYQCLEGGVIA 72
SKK +Y + N L+E +PL+ V FN+ S+ + VFATVG NRVT+Y+C G I
Sbjct: 98 SKKCKYSFKCVNSLKEDHGQPLFGVQFNW-HSKEGDPLVFATVGSNRVTLYECHSQGEIR 156
Query: 73 ALQSYVDEDKEESFYTVSWACNVD-GIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSI 131
LQSYVD D +E+FYT +W + + P L G GIIR+I+ + K +VGHG++I
Sbjct: 157 LLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAI 216
Query: 132 NEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIY--R 189
NE++ P P+L++S SKD ++RLWN+QT + IF G GHR+EVLS D+ D+ +
Sbjct: 217 NELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADY---DLLGEK 273
Query: 190 IASCGMDNTVKIWSM--KEFWTYVEKSFTWTDLPSK----FPTKYVQFPVFIA-SVHSNY 242
I SCGMD+++K+W + K +++S+ + P+K F ++ + FP F +H NY
Sbjct: 274 IMSCGMDHSLKLWRINSKRMINAIKESYEYN--PNKTNRPFISQKIHFPDFSTRDIHRNY 331
Query: 243 VDCNRWLGDFILSKSVDNEIVLWEP-KMKEQ----SPGEGTADILQKYPVPECDIWFIKF 297
VDC RWLGD ILSKS +N IV W+P KM++ P E IL ++ +CDIW+++F
Sbjct: 332 VDCVRWLGDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRF 391
Query: 298 SCDFHYNAAAIGNREGKIFVWELQSSPP--VLIARLSHAQSKSPIRQTAMSYDGSTILSC 355
S DF A+GN+ GK++VW+L+ P L+H + + IRQT+ S D S +++
Sbjct: 392 SMDFWQKMLALGNQVGKLYVWDLEIEDPHKAKCTTLTHPKCVAAIRQTSFSRDSSILIAV 451
Query: 356 CEDGAIWRWDAI 367
C+D +IWRWD +
Sbjct: 452 CDDASIWRWDRL 463
>UNIPROTKB|Q5ZKH3 [details] [associations]
symbol:EED "Polycomb protein EED" species:9031 "Gallus
gallus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0006351 GO:GO:0003682 GO:GO:0035098 GO:GO:0042054
GO:GO:0006349 GO:GO:0045120 HOVERGEN:HBG052708 KO:K11462 CTD:8726
GeneTree:ENSGT00510000047334 HOGENOM:HOG000005759 OrthoDB:EOG4001J7
GO:GO:0001739 EMBL:AJ720111 IPI:IPI00586997 RefSeq:NP_001026547.1
UniGene:Gga.8810 ProteinModelPortal:Q5ZKH3 SMR:Q5ZKH3 STRING:Q5ZKH3
Ensembl:ENSGALT00000022764 GeneID:426381 KEGG:gga:426381
InParanoid:Q5ZKH3 NextBio:20827995 ArrayExpress:Q5ZKH3
Uniprot:Q5ZKH3
Length = 446
Score = 742 (266.3 bits), Expect = 1.7e-73, P = 1.7e-73
Identities = 156/372 (41%), Positives = 231/372 (62%)
Query: 18 SKKREY--RVTNKLQEGK-RPLYAVVFNFIDSRYFN--VFATVGGNRVTVYQCLEGGVIA 72
SKK +Y + N L+E +PL+ V FN+ S+ + VFATVG NRVT+Y+C G I
Sbjct: 80 SKKCKYSFKCVNSLKEDHGQPLFGVQFNW-HSKEGDPLVFATVGSNRVTLYECHSQGEIR 138
Query: 73 ALQSYVDEDKEESFYTVSWACNVD-GIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSI 131
LQSYVD D +E+FYT +W + + P L G GIIR+I+ + K +VGHG++I
Sbjct: 139 LLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAI 198
Query: 132 NEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIY--R 189
NE++ P P+L++S SKD ++RLWN+QT + IF G GHR+EVLS D+ D+ +
Sbjct: 199 NELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADY---DLLGEK 255
Query: 190 IASCGMDNTVKIWSM--KEFWTYVEKSFTWTDLPSK----FPTKYVQFPVFIA-SVHSNY 242
I SCGMD+++K+W + K +++S+ + P+K F ++ + FP F +H NY
Sbjct: 256 IMSCGMDHSLKLWRINSKRMINAIKESYEYN--PNKTNRPFISQKIHFPDFSTRDIHRNY 313
Query: 243 VDCNRWLGDFILSKSVDNEIVLWEP-KMKEQ----SPGEGTADILQKYPVPECDIWFIKF 297
VDC RWLGD ILSKS +N IV W+P KM++ P E IL ++ +CDIW+++F
Sbjct: 314 VDCVRWLGDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRF 373
Query: 298 SCDFHYNAAAIGNREGKIFVWELQSSPP--VLIARLSHAQSKSPIRQTAMSYDGSTILSC 355
S DF A+GN+ GK++VW+L+ P L+H + + IRQT+ S D S +++
Sbjct: 374 SMDFWQKMLALGNQVGKLYVWDLEIEDPHKAKCTTLTHPKCVAAIRQTSFSRDSSILIAV 433
Query: 356 CEDGAIWRWDAI 367
C+D +IWRWD +
Sbjct: 434 CDDASIWRWDRL 445
>UNIPROTKB|Q6AZS2 [details] [associations]
symbol:eed-b "Polycomb protein eed-B" species:8355 "Xenopus
laevis" [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006351 GO:GO:0016568 GO:GO:0035098
HOVERGEN:HBG052708 KO:K11462 EMBL:BM179864 EMBL:AY034136
EMBL:AF460180 EMBL:AF375048 EMBL:BC077425 RefSeq:NP_001082354.1
UniGene:Xl.4736 ProteinModelPortal:Q6AZS2 SMR:Q6AZS2 GeneID:398420
KEGG:xla:398420 CTD:398420 Xenbase:XB-GENE-491484 Uniprot:Q6AZS2
Length = 438
Score = 733 (263.1 bits), Expect = 1.6e-72, P = 1.6e-72
Identities = 156/372 (41%), Positives = 229/372 (61%)
Query: 18 SKKREY--RVTNKLQEG-KRPLYAVVFNFIDSRYFN--VFATVGGNRVTVYQCLEGGVIA 72
SKK +Y + N L+E +PL+ V FN+ S+ + VFATVG NRVT+Y+C G I
Sbjct: 72 SKKCKYSFKCVNSLKEDHNQPLFGVQFNW-HSKEGDPLVFATVGSNRVTLYECHPQGDIR 130
Query: 73 ALQSYVDEDKEESFYTVSWACNVD-GIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSI 131
LQSYVD D +E+FYT +W + + P L G GIIR+I+ + K +VGHG++I
Sbjct: 131 LLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAI 190
Query: 132 NEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIY--R 189
NE++ P P+L++S SKD ++RLWN+QT + IF G GHR+EVLS D+ D+ +
Sbjct: 191 NELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADY---DLLGEK 247
Query: 190 IASCGMDNTVKIWSMKEFW--TYVEKSFTWTDLPSK----FPTKYVQFPVFIA-SVHSNY 242
I SCGMD+++K+W + T +++S+ + P+K F ++ V FP F +H NY
Sbjct: 248 IMSCGMDHSLKLWRINSLRMKTAIKESYDYN--PNKTNRPFVSQKVHFPDFSTRDIHRNY 305
Query: 243 VDCNRWLGDFILSKSVDNEIVLWEP-KMKEQ----SPGEGTADILQKYPVPECDIWFIKF 297
VDC RWLGD ILSKS +N IV W+P KM++ E IL ++ +CDIW+++F
Sbjct: 306 VDCVRWLGDLILSKSCENAIVCWKPGKMEDDIEKIKASESNVTILGRFDYSQCDIWYMRF 365
Query: 298 SCDFHYNAAAIGNREGKIFVWELQSSPP--VLIARLSHAQSKSPIRQTAMSYDGSTILSC 355
S DF A+GN+ GK++VW+L+ P L++ + S IRQT+ S D S +++
Sbjct: 366 SMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTYPKCASAIRQTSFSRDSSVLIAV 425
Query: 356 CEDGAIWRWDAI 367
C+D IWRWD +
Sbjct: 426 CDDSTIWRWDRL 437
>ZFIN|ZDB-GENE-050417-287 [details] [associations]
symbol:eed "embryonic ectoderm development"
species:7955 "Danio rerio" [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-050417-287
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006351 GO:GO:0016568
GO:GO:0035098 HOVERGEN:HBG052708 KO:K11462 CTD:8726
GeneTree:ENSGT00510000047334 HOGENOM:HOG000005759 OrthoDB:EOG4001J7
EMBL:BC093351 EMBL:BC153556 IPI:IPI00570338 RefSeq:NP_001017766.1
UniGene:Dr.83484 ProteinModelPortal:Q566T0 SMR:Q566T0 STRING:Q566T0
Ensembl:ENSDART00000059345 GeneID:550463 KEGG:dre:550463
InParanoid:Q566T0 NextBio:20879707 Bgee:Q566T0 Uniprot:Q566T0
Length = 443
Score = 732 (262.7 bits), Expect = 2.0e-72, P = 2.0e-72
Identities = 156/372 (41%), Positives = 227/372 (61%)
Query: 18 SKKREY--RVTNKLQEGK-RPLYAVVFNFIDSRYFN--VFATVGGNRVTVYQCLEGGVIA 72
SKK +Y + N L+E +PL+ V FN+ S+ + VFATVG NRVT+Y+C G I
Sbjct: 77 SKKCKYSFKCVNSLKEDHGQPLFGVQFNW-HSKEGDPLVFATVGSNRVTLYECHSQGEIR 135
Query: 73 ALQSYVDEDKEESFYTVSWACNVDGI-PFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSI 131
LQSYVD D +E+FYT +W + P L G GIIR+I+ + K +VGHG++I
Sbjct: 136 LLQSYVDADADENFYTCAWTFDCSSSHPLLAVAGSRGIIRIINHITMQCVKHYVGHGNAI 195
Query: 132 NEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIY--R 189
NE++ P P+L++S SKD ++RLWN+QT + IF G GHR+EVLS DF D+ +
Sbjct: 196 NELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADF---DLLGEK 252
Query: 190 IASCGMDNTVKIWSM--KEFWTYVEKSFTWTDLPSK----FPTKYVQFPVFIA-SVHSNY 242
I SCGMD+++K+W + + + S+ + PSK F ++ + FP F +H NY
Sbjct: 253 IMSCGMDHSLKLWRLDSERLQRAIRGSYEYN--PSKTNRPFVSQKIHFPDFSTRDIHRNY 310
Query: 243 VDCNRWLGDFILSKSVDNEIVLWEP-KMKEQ----SPGEGTADILQKYPVPECDIWFIKF 297
VDC RWLGD ILSKS +N IV W+P +M++ P E IL ++ +CDIW+++F
Sbjct: 311 VDCVRWLGDLILSKSCENAIVCWKPGRMEDDIDRIKPNESNVTILGRFDYSQCDIWYMRF 370
Query: 298 SCDFHYNAAAIGNREGKIFVWELQSSPP--VLIARLSHAQSKSPIRQTAMSYDGSTILSC 355
S DF A+GN+ GK++VW+L+ P L+ + S IRQT+ S D S +++
Sbjct: 371 SMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTLPRCTSAIRQTSFSRDSSILIAV 430
Query: 356 CEDGAIWRWDAI 367
C+D +IWRWD +
Sbjct: 431 CDDASIWRWDRL 442
>UNIPROTKB|Q28DT7 [details] [associations]
symbol:eed "Polycomb protein eed" species:8364 "Xenopus
(Silurana) tropicalis" [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006351 GO:GO:0016568
GO:GO:0035098 HOVERGEN:HBG052708 KO:K11462 CTD:8726
HOGENOM:HOG000005759 EMBL:CR848605 RefSeq:NP_001017325.1
UniGene:Str.46642 ProteinModelPortal:Q28DT7 SMR:Q28DT7
STRING:Q28DT7 GeneID:550079 KEGG:xtr:550079 Xenbase:XB-GENE-491480
Bgee:Q28DT7 Uniprot:Q28DT7
Length = 438
Score = 730 (262.0 bits), Expect = 3.2e-72, P = 3.2e-72
Identities = 155/372 (41%), Positives = 228/372 (61%)
Query: 18 SKKREY--RVTNKLQEG-KRPLYAVVFNFIDSRYFN--VFATVGGNRVTVYQCLEGGVIA 72
SKK +Y + N L+E +PL+ V FN+ S+ + VFATVG NRVT+Y+C G I
Sbjct: 72 SKKCKYSFKCVNSLKEDHNQPLFGVQFNW-HSKEGDPLVFATVGSNRVTLYECHPQGEIR 130
Query: 73 ALQSYVDEDKEESFYTVSWACNVD-GIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSI 131
LQSYVD D +E+FYT +W + + P L G GIIR+I+ + K +VGHG++I
Sbjct: 131 LLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAI 190
Query: 132 NEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIY--R 189
NE++ P P+L++S SKD ++RLWN+QT + IF G GHR+EVLS D+ D+ +
Sbjct: 191 NELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADY---DLLGEK 247
Query: 190 IASCGMDNTVKIWSMKEFW--TYVEKSFTWTDLPSK----FPTKYVQFPVFIA-SVHSNY 242
I SCGMD+++K+W + T + +S+ + P+K F ++ + FP F +H NY
Sbjct: 248 IMSCGMDHSLKLWRINSLRMKTAIRESYEYN--PNKTNRPFVSQKIHFPDFSTRDIHRNY 305
Query: 243 VDCNRWLGDFILSKSVDNEIVLWEP-KMKEQ----SPGEGTADILQKYPVPECDIWFIKF 297
VDC RWLGD ILSKS +N IV W+P KM++ E IL ++ +CDIW+++F
Sbjct: 306 VDCVRWLGDLILSKSCENAIVCWKPGKMEDDIDKIKASESNVTILGRFDYSQCDIWYMRF 365
Query: 298 SCDFHYNAAAIGNREGKIFVWELQSSPP--VLIARLSHAQSKSPIRQTAMSYDGSTILSC 355
S DF A+GN+ GK++VW+L+ P L++ + S IRQT+ S D S +++
Sbjct: 366 SMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTYPKCASAIRQTSFSRDSSILVAV 425
Query: 356 CEDGAIWRWDAI 367
C+D IWRWD +
Sbjct: 426 CDDATIWRWDRL 437
>FB|FBgn0000588 [details] [associations]
symbol:esc "extra sexcombs" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=ISS;NAS;IPI] [GO:0016458 "gene
silencing" evidence=IGI;ISS;IMP] [GO:0046974 "histone
methyltransferase activity (H3-K9 specific)" evidence=IC]
[GO:0046976 "histone methyltransferase activity (H3-K27 specific)"
evidence=IC;IMP] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0016571 "histone methylation" evidence=IDA] [GO:0000790
"nuclear chromatin" evidence=ISS] [GO:0003677 "DNA binding"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0031491 "nucleosome binding" evidence=IDA] [GO:0031062
"positive regulation of histone methylation" evidence=IDA]
[GO:0008047 "enzyme activator activity" evidence=IDA] [GO:0035097
"histone methyltransferase complex" evidence=IDA] [GO:0042054
"histone methyltransferase activity" evidence=IDA] [GO:0007517
"muscle organ development" evidence=IMP] [GO:0048666 "neuron
development" evidence=IMP] [GO:0048813 "dendrite morphogenesis"
evidence=IMP] [GO:0070734 "histone H3-K27 methylation"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006351
GO:GO:0000790 GO:GO:0048813 GO:GO:0007517 GO:GO:0035098
GO:GO:0006342 GO:GO:0051567 GO:GO:0008047 GO:GO:0048096
GO:GO:0031062 GO:GO:0070734 KO:K11462 GeneTree:ENSGT00510000047334
EMBL:L41867 EMBL:AY069796 PIR:S58672 RefSeq:NP_477431.1
UniGene:Dm.1948 ProteinModelPortal:Q24338 SMR:Q24338 DIP:DIP-20069N
IntAct:Q24338 MINT:MINT-266724 STRING:Q24338 PaxDb:Q24338
PRIDE:Q24338 EnsemblMetazoa:FBtr0080325 GeneID:34595
KEGG:dme:Dmel_CG14941 CTD:34595 FlyBase:FBgn0000588
InParanoid:Q24338 OMA:DECEIWF OrthoDB:EOG4C5B0H PhylomeDB:Q24338
GenomeRNAi:34595 NextBio:789223 Bgee:Q24338 GermOnline:CG14941
Uniprot:Q24338
Length = 425
Score = 706 (253.6 bits), Expect = 1.1e-69, P = 1.1e-69
Identities = 142/364 (39%), Positives = 213/364 (58%)
Query: 17 PSKKREYRVTNKLQEGKRP-LYAVVFN-FIDSRYFNVFATVGGNRVTVYQCLEGGVIAAL 74
P + Y+ ++E ++ V FN + VFAT G NRVTVY+C G + L
Sbjct: 56 PKSRAAYKYDTHVKENHGANIFGVAFNTLLGKDEPQVFATAGSNRVTVYECPRQGGMQLL 115
Query: 75 QSYVDEDKEESFYTVSWACNVD-GIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINE 133
Y D D +E FYT +W+ ++ P L A G G+IRVIDV + +++GHG +INE
Sbjct: 116 HCYADPDPDEVFYTCAWSYDLKTSSPLLAAAGYRGVIRVIDVEQNEAVGNYIGHGQAINE 175
Query: 134 IRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASC 193
++ P K L++S SKD ++RLWN+Q+ +CI I G GHR+EVLS+DF+ RI S
Sbjct: 176 LKFHPHKLQLLLSGSKDHAIRLWNIQSHVCIAILGGVEGHRDEVLSIDFNMRGD-RIVSS 234
Query: 194 GMDNTVKIWSMK--EFWTYVEKSFTWTDLPSK--FPTKYVQFPVFIA-SVHSNYVDCNRW 248
GMD+++K+W + EF +E S T++ S FPT FP F +H NYVDC +W
Sbjct: 235 GMDHSLKLWCLNTPEFHHKIELSNTFSQEKSTLPFPTVTKHFPDFSTRDIHRNYVDCVQW 294
Query: 249 LGDFILSKSVDNEIVLWEPKMKEQS-----PGEGTADILQKYPVPECDIWFIKFSCDFHY 303
G+F+LSKS +N IV W+P QS P + + I+ ++ EC+IWF++F +
Sbjct: 295 FGNFVLSKSCENAIVCWKPGQLHQSFEQVKPSDSSCTIIAEFEYDECEIWFVRFGFNPWQ 354
Query: 304 NAAAIGNREGKIFVWELQSSPP--VLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAI 361
A+GN++GK++VWEL S P + L +++S + +RQ A S D S ++ C+D +
Sbjct: 355 KVIALGNQQGKVYVWELDPSDPEGAHMTTLHNSRSVATVRQIAFSRDASVLVYVCDDATV 414
Query: 362 WRWD 365
WRW+
Sbjct: 415 WRWN 418
>FB|FBgn0032391 [details] [associations]
symbol:escl "escl" species:7227 "Drosophila melanogaster"
[GO:0035098 "ESC/E(Z) complex" evidence=IDA] [GO:0042054 "histone
methyltransferase activity" evidence=IDA] [GO:0070734 "histone
H3-K27 methylation" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014134 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035098
GO:GO:0070734 GeneTree:ENSGT00510000047334 OMA:CTTLTHP
FlyBase:FBgn0032391 NextBio:789307 EMBL:BT015954 RefSeq:NP_723702.1
UniGene:Dm.21544 SMR:Q9VKD5 STRING:Q9VKD5
EnsemblMetazoa:FBtr0080286 GeneID:34611 KEGG:dme:Dmel_CG5202
UCSC:CG5202-RA CTD:34611 InParanoid:Q9VKD5 GenomeRNAi:34611
Uniprot:Q9VKD5
Length = 462
Score = 704 (252.9 bits), Expect = 1.8e-69, P = 1.8e-69
Identities = 148/369 (40%), Positives = 217/369 (58%)
Query: 23 YRVTNKLQEG-KRPLYAVVFN-FIDSRYFNVFATVGGNRVTVYQC--------LEGGVIA 72
Y+ ++ ++E ++ V FN F+D VFATVG +RV++Y+C EG I
Sbjct: 97 YKYSSHVREDHNHQIFGVQFNPFLDRGQPQVFATVGKDRVSIYECERSTGQESCEG--IR 154
Query: 73 ALQSYVDEDKEESFYTVSWACN-VDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSI 131
LQ Y D D +ESFYT +W+ + V G P L A G G+IR+ + + K+++GHG +I
Sbjct: 155 LLQVYADPDTDESFYTCAWSYDSVTGDPVLAAAGYRGVIRIFNPVKHQCSKNYIGHGHAI 214
Query: 132 NEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFH-PSDIYRI 190
NE++ P +P L++S SKD S+RLWN+Q+ +C+ +F G GHR+EVLSVDF D RI
Sbjct: 215 NELKFHPTRPQLLLSGSKDHSLRLWNIQSDVCVAVFGGVEGHRDEVLSVDFDLRGD--RI 272
Query: 191 ASCGMDNTVKIWSMK--EFWTYVEKS--FTWTDLPSKFPTKYVQFPVFIA-SVHSNYVDC 245
S GMD+++K+W + + +E S F+ FPT FP F +H NYVDC
Sbjct: 273 MSSGMDHSLKLWRLDKPDIKEAIELSSGFSPNKNTGPFPTIKEHFPDFSTRDIHRNYVDC 332
Query: 246 NRWLGDFILSKSVDNEIVLWEP-KMKEQ----SPGEGTADILQKYPVPECDIWFIKFSCD 300
+W GDF+ SKS +N IV W+P K+ E P E +L + C+IWF++F+ +
Sbjct: 333 VQWFGDFVFSKSCENSIVCWKPGKLSESWHEIKPQESATTVLHHFDYKMCEIWFVRFAFN 392
Query: 301 FHYNAAAIGNREGKIFVWELQSSPPVLI--ARLSHAQSKSPIRQTAMSYDGSTILSCCED 358
A+GN+ G FVWEL + P L ++L H +S S IRQT+ S DGS ++ C+D
Sbjct: 393 AWQKILALGNQLGTTFVWELDCNDPNLTKCSQLVHPKSNSTIRQTSFSKDGSILVCVCDD 452
Query: 359 GAIWRWDAI 367
+WRWD +
Sbjct: 453 STVWRWDRV 461
>UNIPROTKB|Q26458 [details] [associations]
symbol:esc "Polycomb protein esc" species:7244 "Drosophila
virilis" [GO:0000790 "nuclear chromatin" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0048096 "chromatin-mediated maintenance
of transcription" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0007275 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0006351 GO:GO:0000790 GO:GO:0048096 OrthoDB:EOG4C5B0H
EMBL:S80985 EMBL:S80982 EMBL:S80983 EMBL:S80984
ProteinModelPortal:Q26458 SMR:Q26458 STRING:Q26458
FlyBase:FBgn0013917 InParanoid:Q26458 Uniprot:Q26458
Length = 425
Score = 704 (252.9 bits), Expect = 1.8e-69, P = 1.8e-69
Identities = 141/364 (38%), Positives = 212/364 (58%)
Query: 17 PSKKREYRVTNKLQEGKRP-LYAVVFN-FIDSRYFNVFATVGGNRVTVYQCLEGGVIAAL 74
P Y+ ++E ++ V FN + VFAT G NR TVY+C G + L
Sbjct: 56 PKSGAAYKYDTHVKENHGANIFGVSFNTLLGKDEPQVFATAGSNRCTVYECPRKGGLTLL 115
Query: 75 QSYVDEDKEESFYTVSWACNVD-GIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINE 133
Y D D +E FYT +W+ ++ P L A G G+IRVID+ + +++GHG +INE
Sbjct: 116 HCYADPDPDEVFYTCAWSYDLKTSAPLLAAAGYRGVIRVIDIEQNEAVDNYIGHGQAINE 175
Query: 134 IRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASC 193
++ P K L++S SKD ++RLWN+QT +CI IF G GHR+EVLS+DF+ RI S
Sbjct: 176 LKFHPHKLQLLLSGSKDHAIRLWNIQTHVCIAIFGGVEGHRDEVLSIDFNMRGD-RIVSS 234
Query: 194 GMDNTVKIWSM--KEFWTYVEKSFTWTDLPSK--FPTKYVQFPVFIA-SVHSNYVDCNRW 248
GMD+++K+W + +EF +E S T++ S FPT FP F +H NYVDC +W
Sbjct: 235 GMDHSLKLWCLNTQEFQHKIELSQTFSQEKSTLPFPTITKHFPDFSTRDIHRNYVDCVQW 294
Query: 249 LGDFILSKSVDNEIVLWEPKMKEQS-----PGEGTADILQKYPVPECDIWFIKFSCDFHY 303
G+F+LSKS +N IV W+P QS P + + I+ ++ EC+IWF++F +
Sbjct: 295 FGNFVLSKSCENAIVCWKPGQLHQSFEQLKPSDSSCTIIAEFEYDECEIWFVRFGFNPWQ 354
Query: 304 NAAAIGNREGKIFVWELQSSPP--VLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAI 361
A+GN++GK++VWE+ S P + L + +S + +RQ A S D S ++ C+D +
Sbjct: 355 KVIALGNQQGKVYVWEMDPSDPEGAHMTTLHNLRSVATVRQIAFSRDASVLVYVCDDATV 414
Query: 362 WRWD 365
WRW+
Sbjct: 415 WRWN 418
>WB|WBGene00003224 [details] [associations]
symbol:mes-6 species:6239 "Caenorhabditis elegans"
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0006915
"apoptotic process" evidence=IMP] [GO:0000786 "nucleosome"
evidence=IDA] [GO:0031519 "PcG protein complex" evidence=IPI]
[GO:0016571 "histone methylation" evidence=IDA] [GO:0070734
"histone H3-K27 methylation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009792 GO:GO:0006915
GO:GO:0002119 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0000003 GO:GO:0006351 GO:GO:0040027
GO:GO:0000786 GO:GO:0031519 GO:GO:0070734 EMBL:AF016224
EMBL:FO080478 KO:K11462 GeneTree:ENSGT00510000047334
eggNOG:NOG275229 RefSeq:NP_001021320.1 ProteinModelPortal:Q9GYS1
SMR:Q9GYS1 MINT:MINT-197423 STRING:Q9GYS1 PaxDb:Q9GYS1
EnsemblMetazoa:C09G4.5 GeneID:177657 KEGG:cel:CELE_C09G4.5
UCSC:C09G4.5 CTD:177657 WormBase:C09G4.5 HOGENOM:HOG000020629
InParanoid:Q9GYS1 OMA:RRRWLVC NextBio:897800 Uniprot:Q9GYS1
Length = 459
Score = 225 (84.3 bits), Expect = 4.5e-24, Sum P(2) = 4.5e-24
Identities = 70/215 (32%), Positives = 110/215 (51%)
Query: 20 KREYRVTNKLQEG-KRPLYAVVFNF---IDSRYFNVFATVGGNRVTVYQC-LEGGVIAAL 74
KR + +T KL E K+ +Y FN ID ATVGG+ + +Y ++ I
Sbjct: 24 KRPFVLTAKLLEDQKKAIYGCAFNQYAGIDEE--QAVATVGGSFLHMYSVPIDINNIELQ 81
Query: 75 QSY---VDE----DKEESFYTVSWACNV-----DGIPF-LVAGGINGIIRVIDVSNEKLH 121
S D+ ++EES +TV+W + D PF +V GG G I VID + KL
Sbjct: 82 WSCNFPTDKSSKVEREESLFTVTWCYDTYEAENDRNPFKVVTGGTLGHIYVIDYVSRKLS 141
Query: 122 KSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVD 181
G IN+IRT P +L+V AS D+S+R+ +++ C+++ G H +LSVD
Sbjct: 142 NRLRSVGWEINDIRTCPANSNLIVCASSDQSIRIHHIRNEACLIVIGGLECHAGTILSVD 201
Query: 182 FHPSDIYRIASCGMDNTVKIW--SMKEFWTYVEKS 214
+ + I SCG D+ + W S+K+ ++E++
Sbjct: 202 WSTDGDF-ILSCGFDHQLMEWDLSVKQVKEHLERA 235
Score = 112 (44.5 bits), Expect = 4.5e-24, Sum P(2) = 4.5e-24
Identities = 39/144 (27%), Positives = 66/144 (45%)
Query: 238 VHSNYVDCNRWL-G-DFILSKSVDNE--IVLWE---PKMKEQSPGEGTA----DILQKYP 286
+HS+YVDC R+L G ++ LSK NE I W PK + ++ G K+
Sbjct: 305 MHSDYVDCIRFLIGTNYALSKGCGNEKAIHFWRFGPPKGEVENRIHGNVLRPKSCTTKFR 364
Query: 287 ---VPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQT 343
VP WFIKF+ D G G + ++L+++ S++ +RQ
Sbjct: 365 TMNVPSGSAWFIKFAVDPRRRWLVCGGAGGSVMFFDLRNNEETNPTHTCSVGSRT-VRQA 423
Query: 344 AMSYDGSTILSCCEDGAIWRWDAI 367
+ S G ++ ++G + R+D +
Sbjct: 424 SFSTCGRFLVLVTDEGFVCRFDRV 447
>UNIPROTKB|E9PMU3 [details] [associations]
symbol:EED "Polycomb protein EED" species:9606 "Homo
sapiens" [GO:0001739 "sex chromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0006349 "regulation of gene
expression by genetic imprinting" evidence=IEA] [GO:0016571
"histone methylation" evidence=IEA] [GO:0035098 "ESC/E(Z) complex"
evidence=IEA] [GO:0045120 "pronucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0003682
GO:GO:0006349 GO:GO:0045120 GO:GO:0016571 GO:GO:0001739
EMBL:AP003084 HGNC:HGNC:3188 ChiTaRS:EED IPI:IPI00978431
ProteinModelPortal:E9PMU3 SMR:E9PMU3 Ensembl:ENST00000527888
ArrayExpress:E9PMU3 Bgee:E9PMU3 Uniprot:E9PMU3
Length = 106
Score = 219 (82.2 bits), Expect = 9.9e-18, P = 9.9e-18
Identities = 38/104 (36%), Positives = 62/104 (59%)
Query: 266 EPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPP 325
E + + P E IL ++ +CDIW+++FS DF A+GN+ GK++VW+L+ P
Sbjct: 2 EDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDP 61
Query: 326 --VLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAI 367
L+H + + IRQT+ S D S +++ C+D +IWRWD +
Sbjct: 62 HKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 105
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 142 (55.0 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 55/200 (27%), Positives = 89/200 (44%)
Query: 7 GCEPLVGSLTPSKKREYRVTNKLQEGKRPLYAVVFNFI-DSRYFNVFATVGGNR-VTVYQ 64
G + LVG PS + + + L + NF D +Y AT G NR +Y
Sbjct: 255 GTDWLVG-YNPSVQTNLNI-DLLHNLQHNSVVCCVNFSNDGKYL---AT-GCNRSAQIYD 308
Query: 65 CLEGGVIAALQSYVDE-DKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKS 123
G + A +VDE +K+ Y S + DG +L G + ++V D+ +K+ +
Sbjct: 309 VDTGKKVHA---FVDESEKDGDLYIRSVCFSPDG-NYLATGAEDKTVKVWDIHTKKIQHT 364
Query: 124 FVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAG-GHRNEVLSVDF 182
F GH I + +VS S D+ ++W+++ G C G +N V SV
Sbjct: 365 FYGHELDIYSLDYSS-DGRFIVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAM 423
Query: 183 HPSDIYRIASCGMDNTVKIW 202
P D +A+ +DN V++W
Sbjct: 424 SP-DGRLVAAGSLDNIVRLW 442
Score = 115 (45.5 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 37/126 (29%), Positives = 61/126 (48%)
Query: 83 EESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEK----LHKSFVGHGDSINEIRTQP 138
E Y++ ++ DG F+V+G + ++ D+ K L VG + + + P
Sbjct: 369 ELDIYSLDYSS--DG-RFIVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSP 425
Query: 139 LKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNT 198
LV + S D VRLW+ QTG + + G H + V SV F P D +AS +D +
Sbjct: 426 -DGRLVAAGSLDNIVRLWDAQTGYFLERYEG---HLDSVYSVAFSP-DGKSLASGSLDKS 480
Query: 199 VKIWSM 204
+K+W +
Sbjct: 481 LKLWDL 486
Score = 82 (33.9 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 28/116 (24%), Positives = 52/116 (44%)
Query: 250 GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIG 309
G + + S+DN + LW+ + T L++Y ++ + FS D + A G
Sbjct: 427 GRLVAAGSLDNIVRLWDAQ---------TGYFLERYEGHLDSVYSVAFSPDG--KSLASG 475
Query: 310 NREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWD 365
+ + + +W+L S R + K + A S DGS ++S +D ++ WD
Sbjct: 476 SLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWD 531
Score = 44 (20.5 bits), Expect = 9.2e-07, Sum P(2) = 9.2e-07
Identities = 6/19 (31%), Positives = 12/19 (63%)
Query: 250 GDFILSKSVDNEIVLWEPK 268
G +++S S D + W+P+
Sbjct: 515 GSWLISGSKDRSVQFWDPR 533
>UNIPROTKB|Q32SG6 [details] [associations]
symbol:Q32SG6 "Protein HIRA" species:4577 "Zea mays"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR011494 InterPro:IPR015943
Pfam:PF00400 Pfam:PF07569 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006351
GO:GO:0016568 KO:K11293 EMBL:AY940678 RefSeq:NP_001105835.1
UniGene:Zm.22931 ProteinModelPortal:Q32SG6 IntAct:Q32SG6
GeneID:732736 KEGG:zma:732736 Gramene:Q32SG6 Uniprot:Q32SG6
Length = 964
Score = 128 (50.1 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 39/130 (30%), Positives = 59/130 (45%)
Query: 114 DVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGH 173
D N K+ ++ GH + ++ P S + S S D ++ +WN+ GIC + G H
Sbjct: 111 DAENWKVIMTWRGHTADVVDLSWSP-DDSTLASGSLDNTIHIWNMNNGICTAVLRG---H 166
Query: 174 RNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFT-WT-DLPSKFPTKYVQF 231
+ V V + P + IAS D TV IW + W+ K+ WT L S F +
Sbjct: 167 TSLVKGVTWDPIGSF-IASQSDDKTVMIWRTSD-WSLAHKTEGHWTKSLGSTFFRRLAWS 224
Query: 232 PV--FIASVH 239
P FI + H
Sbjct: 225 PCCHFITTTH 234
Score = 89 (36.4 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 21/58 (36%), Positives = 34/58 (58%)
Query: 303 YNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGA 360
YN AIG+++ I VW S+ P+ +AR H S+S + + S DG ++ +C DG+
Sbjct: 306 YNVIAIGSQDRTITVWTTASARPLFVAR--HFFSQSVV-DLSWSPDGYSLFACSLDGS 360
>UNIPROTKB|B4DF38 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016787 GO:GO:0005874 HOGENOM:HOG000184015 InterPro:IPR017252
PANTHER:PTHR22847:SF51 UniGene:Hs.77318 HGNC:HGNC:8574
ChiTaRS:PAFAH1B1 EMBL:AC015799 EMBL:AC005696 EMBL:AK293918
IPI:IPI00909586 SMR:B4DF38 STRING:B4DF38 Ensembl:ENST00000451360
UCSC:uc010vqz.2 HOVERGEN:HBG103859 Uniprot:B4DF38
Length = 205
Score = 148 (57.2 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 50/169 (29%), Positives = 81/169 (47%)
Query: 110 IRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAG 169
I++ D + ++ GH +++ + P +VSAS+D+++++W VQTG C+ F G
Sbjct: 3 IKLWDFQGFECIRTMHGHDHNVSSVAIMP-NGDHIVSASRDKTIKMWEVQTGYCVKTFTG 61
Query: 170 AGGHRNEVLSVDFHPS-DIYRIASCGMDNTVKIW--SMKEFWTYVEKSFTWTDLPSKFP- 225
HR V V P+ D IASC D TV++W + KE + + + S P
Sbjct: 62 ---HREWVRMV--RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 116
Query: 226 TKYVQFPVFIASV--HSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMK 270
+ Y S H N+V + G FILS + D + +W+ K K
Sbjct: 117 SSYSSISEATGSEVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 165
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 143 (55.4 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 46/161 (28%), Positives = 77/161 (47%)
Query: 110 IRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAG 169
I++ D + ++ GH +++ + P +VSAS+D+++++W VQTG C+ F G
Sbjct: 109 IKLWDFQGFECIRTMHGHDHNVSSVAIMP-NGDHIVSASRDKTIKMWEVQTGYCVKTFTG 167
Query: 170 AGGHRNEVLSVDFHPS-DIYRIASCGMDNTVKIW--SMKEFWTYVEKSFTWTDLPSKFP- 225
HR V V P+ D IASC D TV++W + KE + + + S P
Sbjct: 168 ---HREWVRMV--RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 222
Query: 226 TKYVQFPVFIASVHSNYVDCNRWLGDFILSKSVDNEIVLWE 266
+ Y I+ + + G F+LS S D I +W+
Sbjct: 223 SSYSS----ISEATGSETKKSGKPGPFLLSGSRDKTIKMWD 259
Score = 122 (48.0 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 24/67 (35%), Positives = 40/67 (59%)
Query: 140 KPS-LVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNT 198
KP ++S S+D+++++W+V TG+C++ G H N V V FH + I SC D T
Sbjct: 241 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVG---HDNWVRGVLFHSGGKF-ILSCADDKT 296
Query: 199 VKIWSMK 205
+++W K
Sbjct: 297 LRVWDYK 303
Score = 121 (47.7 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 34/116 (29%), Positives = 55/116 (47%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
+V+ + I+V D ++ GH DS+ +I L+ S S D +++LW+ Q
Sbjct: 58 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH-SGKLLASCSADMTIKLWDFQG 116
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFT 216
CI G H + V SV P+ + I S D T+K+W ++ Y K+FT
Sbjct: 117 FECIRTMHG---HDHNVSSVAIMPNGDH-IVSASRDKTIKMWEVQT--GYCVKTFT 166
Score = 120 (47.3 bits), Expect = 0.00016, P = 0.00016
Identities = 28/107 (26%), Positives = 55/107 (51%)
Query: 99 PFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 158
PFL++G + I++ DVS + VGH + + + ++S + D+++R+W+
Sbjct: 244 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHS-GGKFILSCADDKTLRVWDY 302
Query: 159 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
+ C+ H + V S+DFH + Y + + +D TVK+W +
Sbjct: 303 KNKRCMKTL---NAHEHFVTSLDFHKTAPY-VVTGSVDQTVKVWECR 345
Score = 108 (43.1 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 25/83 (30%), Positives = 44/83 (53%)
Query: 126 GHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDF-HP 184
GH + + P+ S++VSAS+D ++++W+ +TG G H + V + F H
Sbjct: 41 GHRSPVTRVIFHPVF-SVMVSASEDATIKVWDYETGDFERTLKG---HTDSVQDISFDHS 96
Query: 185 SDIYRIASCGMDNTVKIWSMKEF 207
+ +ASC D T+K+W + F
Sbjct: 97 GKL--LASCSADMTIKLWDFQGF 117
Score = 58 (25.5 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 16/57 (28%), Positives = 28/57 (49%)
Query: 309 GNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWD 365
G+R+ I +W++ S+ L+ + H + +R G ILSC +D + WD
Sbjct: 249 GSRDKTIKMWDV-STGMCLMTLVGH---DNWVRGVLFHSGGKFILSCADDKTLRVWD 301
Score = 50 (22.7 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 15/55 (27%), Positives = 25/55 (45%)
Query: 310 NREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRW 364
+R+ I +WE+Q+ V H + +R + DG+ I SC D + W
Sbjct: 146 SRDKTIKMWEVQTGYCVKTFT-GHREW---VRMVRPNQDGTLIASCSNDQTVRVW 196
Score = 41 (19.5 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 250 GDFILSKSVDNEIVLWEPKMK 270
G FILS + D + +W+ K K
Sbjct: 285 GKFILSCADDKTLRVWDYKNK 305
Score = 37 (18.1 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 5/15 (33%), Positives = 11/15 (73%)
Query: 252 FILSKSVDNEIVLWE 266
++++ SVD + +WE
Sbjct: 329 YVVTGSVDQTVKVWE 343
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 144 (55.7 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 45/160 (28%), Positives = 75/160 (46%)
Query: 110 IRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAG 169
I++ D + ++ GH +++ + P +VSAS+D+++++W VQTG C+ F G
Sbjct: 174 IKLWDFQGFECIRTMHGHDHNVSSVAIMP-NGDHIVSASRDKTIKMWEVQTGYCVKTFTG 232
Query: 170 AGGHRNEVLSVDFHPS-DIYRIASCGMDNTVKIW--SMKEFWTYVEKSFTWTDLPSKFPT 226
HR V V P+ D IASC D TV++W + KE + + + S P
Sbjct: 233 ---HREWVRMV--RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Query: 227 KYVQFPVFIASVHSNYVDCNRWLGDFILSKSVDNEIVLWE 266
+ + S + G F+LS S D I +W+
Sbjct: 288 S--SYSTISEATGSETKKSGK-PGPFLLSGSRDKTIKMWD 324
Score = 122 (48.0 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 23/67 (34%), Positives = 40/67 (59%)
Query: 140 KPS-LVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNT 198
KP ++S S+D+++++W++ TG+C++ G H N V V FH + I SC D T
Sbjct: 306 KPGPFLLSGSRDKTIKMWDISTGMCLMTLVG---HDNWVRGVLFHSGGKF-ILSCADDKT 361
Query: 199 VKIWSMK 205
+++W K
Sbjct: 362 LRVWDFK 368
Score = 120 (47.3 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 34/116 (29%), Positives = 55/116 (47%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
+V+ + I+V D ++ GH DS+ +I L+ S S D +++LW+ Q
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTG-KLLASCSADMTIKLWDFQG 181
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFT 216
CI G H + V SV P+ + I S D T+K+W ++ Y K+FT
Sbjct: 182 FECIRTMHG---HDHNVSSVAIMPNGDH-IVSASRDKTIKMWEVQT--GYCVKTFT 231
Score = 119 (46.9 bits), Expect = 0.00028, P = 0.00028
Identities = 27/107 (25%), Positives = 55/107 (51%)
Query: 99 PFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 158
PFL++G + I++ D+S + VGH + + + ++S + D+++R+W+
Sbjct: 309 PFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHS-GGKFILSCADDKTLRVWDF 367
Query: 159 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
+ C+ H + V S+DFH + Y + + +D TVK+W +
Sbjct: 368 KNKRCMKTL---NAHEHFVTSLDFHKTAPY-VVTGSVDQTVKVWECR 410
Score = 108 (43.1 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 25/83 (30%), Positives = 44/83 (53%)
Query: 126 GHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDF-HP 184
GH + + P+ S++VSAS+D ++++W+ +TG G H + V + F H
Sbjct: 106 GHRSPVTRVIFHPVF-SVMVSASEDATIKVWDYETGDFERTLKG---HTDSVQDISFDHT 161
Query: 185 SDIYRIASCGMDNTVKIWSMKEF 207
+ +ASC D T+K+W + F
Sbjct: 162 GKL--LASCSADMTIKLWDFQGF 182
Score = 59 (25.8 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 16/57 (28%), Positives = 28/57 (49%)
Query: 309 GNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWD 365
G+R+ I +W++ S+ L+ + H + +R G ILSC +D + WD
Sbjct: 314 GSRDKTIKMWDI-STGMCLMTLVGH---DNWVRGVLFHSGGKFILSCADDKTLRVWD 366
Score = 50 (22.7 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 15/55 (27%), Positives = 25/55 (45%)
Query: 310 NREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRW 364
+R+ I +WE+Q+ V H + +R + DG+ I SC D + W
Sbjct: 211 SRDKTIKMWEVQTGYCVKTFT-GHREW---VRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 40 (19.1 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 250 GDFILSKSVDNEIVLWEPKMK 270
G FILS + D + +W+ K K
Sbjct: 350 GKFILSCADDKTLRVWDFKNK 370
Score = 37 (18.1 bits), Expect = 9.3e-07, Sum P(2) = 9.3e-07
Identities = 5/15 (33%), Positives = 11/15 (73%)
Query: 252 FILSKSVDNEIVLWE 266
++++ SVD + +WE
Sbjct: 394 YVVTGSVDQTVKVWE 408
>UNIPROTKB|I3L3N5 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005874 InterPro:IPR017252
PANTHER:PTHR22847:SF51 HGNC:HGNC:8574 ChiTaRS:PAFAH1B1
EMBL:AC015799 EMBL:AC005696 Ensembl:ENST00000574468 Bgee:I3L3N5
Uniprot:I3L3N5
Length = 208
Score = 148 (57.2 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 50/169 (29%), Positives = 81/169 (47%)
Query: 110 IRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAG 169
I++ D + ++ GH +++ + P +VSAS+D+++++W VQTG C+ F G
Sbjct: 6 IKLWDFQGFECIRTMHGHDHNVSSVAIMP-NGDHIVSASRDKTIKMWEVQTGYCVKTFTG 64
Query: 170 AGGHRNEVLSVDFHPS-DIYRIASCGMDNTVKIW--SMKEFWTYVEKSFTWTDLPSKFP- 225
HR V V P+ D IASC D TV++W + KE + + + S P
Sbjct: 65 ---HREWVRMV--RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 119
Query: 226 TKYVQFPVFIASV--HSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMK 270
+ Y S H N+V + G FILS + D + +W+ K K
Sbjct: 120 SSYSSISEATGSEVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 168
>UNIPROTKB|F1RJ54 [details] [associations]
symbol:WSB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0035556
"intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 CTD:26118 KO:K10341 OMA:GHHNDVV
EMBL:FP102612 RefSeq:XP_003131801.1 UniGene:Ssc.25169
Ensembl:ENSSSCT00000019321 GeneID:100525660 KEGG:ssc:100525660
Uniprot:F1RJ54
Length = 421
Score = 133 (51.9 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 36/115 (31%), Positives = 63/115 (54%)
Query: 101 LVAGGIN-GIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 159
L+A G+N G I++ DV KL + V H + + ++ P ++VSAS+D+++R+W+++
Sbjct: 142 LLATGLNNGRIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLK 201
Query: 160 T-GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEK 213
G + + G H+N V S F P D + S G V +W M ++ T + K
Sbjct: 202 DDGNMMKVLRG---HQNWVYSCAFSP-DSSMLCSVGASKAVFLWDMDKY-TMIRK 251
Score = 71 (30.1 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 36/144 (25%), Positives = 60/144 (41%)
Query: 239 HSNYVDCNRWL-GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKY------PVP--- 288
H + V C+ G + + S D + +W+P T DIL ++ P P
Sbjct: 256 HHDVVACDFSPDGALLATASYDTRVYIWDPH---------TGDILMEFGHLFPPPTPIFA 306
Query: 289 --ECDIWF--IKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTA 344
D W + FS D + A++ + + + W + PV +A LS+ A
Sbjct: 307 GGANDRWVRSVSFSHD-GLHVASLAD-DKMVRFWRIDEDYPVQVAPLSNGLC------CA 358
Query: 345 MSYDGSTILSCCEDGAIWRWDAIP 368
S DGS + + DG+++ W A P
Sbjct: 359 FSTDGSVLAAGTHDGSVYFW-ATP 381
Score = 39 (18.8 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 10/38 (26%), Positives = 17/38 (44%)
Query: 299 CDFHYNAA--AIGNREGKIFVWELQSSPPVL--IARLS 332
C F + + A G +G ++ W P L + R+S
Sbjct: 357 CAFSTDGSVLAAGTHDGSVYFWATPRQVPSLQHLCRMS 394
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 143 (55.4 bits), Expect = 8.5e-09, Sum P(2) = 8.5e-09
Identities = 46/161 (28%), Positives = 77/161 (47%)
Query: 110 IRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAG 169
I++ D + ++ GH +++ + P +VSAS+D+++++W VQTG C+ F G
Sbjct: 174 IKLWDFQGFECIRTMHGHDHNVSSVAIMP-NGDHIVSASRDKTIKMWEVQTGYCVKTFTG 232
Query: 170 AGGHRNEVLSVDFHPS-DIYRIASCGMDNTVKIW--SMKEFWTYVEKSFTWTDLPSKFP- 225
HR V V P+ D IASC D TV++W + KE + + + S P
Sbjct: 233 ---HREWVRMV--RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Query: 226 TKYVQFPVFIASVHSNYVDCNRWLGDFILSKSVDNEIVLWE 266
+ Y I+ + + G F+LS S D I +W+
Sbjct: 288 SSYSS----ISEATGSETKKSGKPGPFLLSGSRDKTIKMWD 324
Score = 122 (48.0 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 24/67 (35%), Positives = 40/67 (59%)
Query: 140 KPS-LVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNT 198
KP ++S S+D+++++W+V TG+C++ G H N V V FH + I SC D T
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVG---HDNWVRGVLFHSGGKF-ILSCADDKT 361
Query: 199 VKIWSMK 205
+++W K
Sbjct: 362 LRVWDYK 368
Score = 121 (47.7 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 34/116 (29%), Positives = 55/116 (47%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
+V+ + I+V D ++ GH DS+ +I L+ S S D +++LW+ Q
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH-SGKLLASCSADMTIKLWDFQG 181
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFT 216
CI G H + V SV P+ + I S D T+K+W ++ Y K+FT
Sbjct: 182 FECIRTMHG---HDHNVSSVAIMPNGDH-IVSASRDKTIKMWEVQT--GYCVKTFT 231
Score = 120 (47.3 bits), Expect = 0.00022, P = 0.00022
Identities = 28/107 (26%), Positives = 55/107 (51%)
Query: 99 PFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 158
PFL++G + I++ DVS + VGH + + + ++S + D+++R+W+
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHS-GGKFILSCADDKTLRVWDY 367
Query: 159 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
+ C+ H + V S+DFH + Y + + +D TVK+W +
Sbjct: 368 KNKRCMKTL---NAHEHFVTSLDFHKTAPY-VVTGSVDQTVKVWECR 410
Score = 108 (43.1 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 25/83 (30%), Positives = 44/83 (53%)
Query: 126 GHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDF-HP 184
GH + + P+ S++VSAS+D ++++W+ +TG G H + V + F H
Sbjct: 106 GHRSPVTRVIFHPVF-SVMVSASEDATIKVWDYETGDFERTLKG---HTDSVQDISFDHS 161
Query: 185 SDIYRIASCGMDNTVKIWSMKEF 207
+ +ASC D T+K+W + F
Sbjct: 162 GKL--LASCSADMTIKLWDFQGF 182
Score = 58 (25.5 bits), Expect = 8.5e-09, Sum P(2) = 8.5e-09
Identities = 16/57 (28%), Positives = 28/57 (49%)
Query: 309 GNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWD 365
G+R+ I +W++ S+ L+ + H + +R G ILSC +D + WD
Sbjct: 314 GSRDKTIKMWDV-STGMCLMTLVGH---DNWVRGVLFHSGGKFILSCADDKTLRVWD 366
Score = 50 (22.7 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 15/55 (27%), Positives = 25/55 (45%)
Query: 310 NREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRW 364
+R+ I +WE+Q+ V H + +R + DG+ I SC D + W
Sbjct: 211 SRDKTIKMWEVQTGYCVKTFT-GHREW---VRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 41 (19.5 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 250 GDFILSKSVDNEIVLWEPKMK 270
G FILS + D + +W+ K K
Sbjct: 350 GKFILSCADDKTLRVWDYKNK 370
Score = 37 (18.1 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 5/15 (33%), Positives = 11/15 (73%)
Query: 252 FILSKSVDNEIVLWE 266
++++ SVD + +WE
Sbjct: 394 YVVTGSVDQTVKVWE 408
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 143 (55.4 bits), Expect = 8.5e-09, Sum P(2) = 8.5e-09
Identities = 46/161 (28%), Positives = 77/161 (47%)
Query: 110 IRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAG 169
I++ D + ++ GH +++ + P +VSAS+D+++++W VQTG C+ F G
Sbjct: 174 IKLWDFQGFECIRTMHGHDHNVSSVAIMP-NGDHIVSASRDKTIKMWEVQTGYCVKTFTG 232
Query: 170 AGGHRNEVLSVDFHPS-DIYRIASCGMDNTVKIW--SMKEFWTYVEKSFTWTDLPSKFP- 225
HR V V P+ D IASC D TV++W + KE + + + S P
Sbjct: 233 ---HREWVRMV--RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Query: 226 TKYVQFPVFIASVHSNYVDCNRWLGDFILSKSVDNEIVLWE 266
+ Y I+ + + G F+LS S D I +W+
Sbjct: 288 SSYSS----ISEATGSETKKSGKPGPFLLSGSRDKTIKMWD 324
Score = 122 (48.0 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 24/67 (35%), Positives = 40/67 (59%)
Query: 140 KPS-LVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNT 198
KP ++S S+D+++++W+V TG+C++ G H N V V FH + I SC D T
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVG---HDNWVRGVLFHSGGKF-ILSCADDKT 361
Query: 199 VKIWSMK 205
+++W K
Sbjct: 362 LRVWDYK 368
Score = 121 (47.7 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 34/116 (29%), Positives = 55/116 (47%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
+V+ + I+V D ++ GH DS+ +I L+ S S D +++LW+ Q
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH-SGKLLASCSADMTIKLWDFQG 181
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFT 216
CI G H + V SV P+ + I S D T+K+W ++ Y K+FT
Sbjct: 182 FECIRTMHG---HDHNVSSVAIMPNGDH-IVSASRDKTIKMWEVQT--GYCVKTFT 231
Score = 120 (47.3 bits), Expect = 0.00022, P = 0.00022
Identities = 28/107 (26%), Positives = 55/107 (51%)
Query: 99 PFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 158
PFL++G + I++ DVS + VGH + + + ++S + D+++R+W+
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHS-GGKFILSCADDKTLRVWDY 367
Query: 159 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
+ C+ H + V S+DFH + Y + + +D TVK+W +
Sbjct: 368 KNKRCMKTL---NAHEHFVTSLDFHKTAPY-VVTGSVDQTVKVWECR 410
Score = 108 (43.1 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 25/83 (30%), Positives = 44/83 (53%)
Query: 126 GHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDF-HP 184
GH + + P+ S++VSAS+D ++++W+ +TG G H + V + F H
Sbjct: 106 GHRSPVTRVIFHPVF-SVMVSASEDATIKVWDYETGDFERTLKG---HTDSVQDISFDHS 161
Query: 185 SDIYRIASCGMDNTVKIWSMKEF 207
+ +ASC D T+K+W + F
Sbjct: 162 GKL--LASCSADMTIKLWDFQGF 182
Score = 58 (25.5 bits), Expect = 8.5e-09, Sum P(2) = 8.5e-09
Identities = 16/57 (28%), Positives = 28/57 (49%)
Query: 309 GNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWD 365
G+R+ I +W++ S+ L+ + H + +R G ILSC +D + WD
Sbjct: 314 GSRDKTIKMWDV-STGMCLMTLVGH---DNWVRGVLFHSGGKFILSCADDKTLRVWD 366
Score = 50 (22.7 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 15/55 (27%), Positives = 25/55 (45%)
Query: 310 NREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRW 364
+R+ I +WE+Q+ V H + +R + DG+ I SC D + W
Sbjct: 211 SRDKTIKMWEVQTGYCVKTFT-GHREW---VRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 41 (19.5 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 250 GDFILSKSVDNEIVLWEPKMK 270
G FILS + D + +W+ K K
Sbjct: 350 GKFILSCADDKTLRVWDYKNK 370
Score = 37 (18.1 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 5/15 (33%), Positives = 11/15 (73%)
Query: 252 FILSKSVDNEIVLWE 266
++++ SVD + +WE
Sbjct: 394 YVVTGSVDQTVKVWE 408
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 143 (55.4 bits), Expect = 8.5e-09, Sum P(2) = 8.5e-09
Identities = 46/161 (28%), Positives = 77/161 (47%)
Query: 110 IRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAG 169
I++ D + ++ GH +++ + P +VSAS+D+++++W VQTG C+ F G
Sbjct: 174 IKLWDFQGFECIRTMHGHDHNVSSVAIMP-NGDHIVSASRDKTIKMWEVQTGYCVKTFTG 232
Query: 170 AGGHRNEVLSVDFHPS-DIYRIASCGMDNTVKIW--SMKEFWTYVEKSFTWTDLPSKFP- 225
HR V V P+ D IASC D TV++W + KE + + + S P
Sbjct: 233 ---HREWVRMV--RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Query: 226 TKYVQFPVFIASVHSNYVDCNRWLGDFILSKSVDNEIVLWE 266
+ Y I+ + + G F+LS S D I +W+
Sbjct: 288 SSYSS----ISEATGSETKKSGKPGPFLLSGSRDKTIKMWD 324
Score = 122 (48.0 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 24/67 (35%), Positives = 40/67 (59%)
Query: 140 KPS-LVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNT 198
KP ++S S+D+++++W+V TG+C++ G H N V V FH + I SC D T
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVG---HDNWVRGVLFHSGGKF-ILSCADDKT 361
Query: 199 VKIWSMK 205
+++W K
Sbjct: 362 LRVWDYK 368
Score = 121 (47.7 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 34/116 (29%), Positives = 55/116 (47%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
+V+ + I+V D ++ GH DS+ +I L+ S S D +++LW+ Q
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH-SGKLLASCSADMTIKLWDFQG 181
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFT 216
CI G H + V SV P+ + I S D T+K+W ++ Y K+FT
Sbjct: 182 FECIRTMHG---HDHNVSSVAIMPNGDH-IVSASRDKTIKMWEVQT--GYCVKTFT 231
Score = 120 (47.3 bits), Expect = 0.00022, P = 0.00022
Identities = 28/107 (26%), Positives = 55/107 (51%)
Query: 99 PFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 158
PFL++G + I++ DVS + VGH + + + ++S + D+++R+W+
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHS-GGKFILSCADDKTLRVWDY 367
Query: 159 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
+ C+ H + V S+DFH + Y + + +D TVK+W +
Sbjct: 368 KNKRCMKTL---NAHEHFVTSLDFHKTAPY-VVTGSVDQTVKVWECR 410
Score = 108 (43.1 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 25/83 (30%), Positives = 44/83 (53%)
Query: 126 GHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDF-HP 184
GH + + P+ S++VSAS+D ++++W+ +TG G H + V + F H
Sbjct: 106 GHRSPVTRVIFHPVF-SVMVSASEDATIKVWDYETGDFERTLKG---HTDSVQDISFDHS 161
Query: 185 SDIYRIASCGMDNTVKIWSMKEF 207
+ +ASC D T+K+W + F
Sbjct: 162 GKL--LASCSADMTIKLWDFQGF 182
Score = 58 (25.5 bits), Expect = 8.5e-09, Sum P(2) = 8.5e-09
Identities = 16/57 (28%), Positives = 28/57 (49%)
Query: 309 GNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWD 365
G+R+ I +W++ S+ L+ + H + +R G ILSC +D + WD
Sbjct: 314 GSRDKTIKMWDV-STGMCLMTLVGH---DNWVRGVLFHSGGKFILSCADDKTLRVWD 366
Score = 50 (22.7 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 15/55 (27%), Positives = 25/55 (45%)
Query: 310 NREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRW 364
+R+ I +WE+Q+ V H + +R + DG+ I SC D + W
Sbjct: 211 SRDKTIKMWEVQTGYCVKTFT-GHREW---VRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 41 (19.5 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 250 GDFILSKSVDNEIVLWEPKMK 270
G FILS + D + +W+ K K
Sbjct: 350 GKFILSCADDKTLRVWDYKNK 370
Score = 37 (18.1 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 5/15 (33%), Positives = 11/15 (73%)
Query: 252 FILSKSVDNEIVLWE 266
++++ SVD + +WE
Sbjct: 394 YVVTGSVDQTVKVWE 408
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 143 (55.4 bits), Expect = 8.5e-09, Sum P(2) = 8.5e-09
Identities = 46/161 (28%), Positives = 77/161 (47%)
Query: 110 IRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAG 169
I++ D + ++ GH +++ + P +VSAS+D+++++W VQTG C+ F G
Sbjct: 174 IKLWDFQGFECIRTMHGHDHNVSSVAIMP-NGDHIVSASRDKTIKMWEVQTGYCVKTFTG 232
Query: 170 AGGHRNEVLSVDFHPS-DIYRIASCGMDNTVKIW--SMKEFWTYVEKSFTWTDLPSKFP- 225
HR V V P+ D IASC D TV++W + KE + + + S P
Sbjct: 233 ---HREWVRMV--RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Query: 226 TKYVQFPVFIASVHSNYVDCNRWLGDFILSKSVDNEIVLWE 266
+ Y I+ + + G F+LS S D I +W+
Sbjct: 288 SSYSS----ISEATGSETKKSGKPGPFLLSGSRDKTIKMWD 324
Score = 122 (48.0 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 24/67 (35%), Positives = 40/67 (59%)
Query: 140 KPS-LVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNT 198
KP ++S S+D+++++W+V TG+C++ G H N V V FH + I SC D T
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVG---HDNWVRGVLFHSGGKF-ILSCADDKT 361
Query: 199 VKIWSMK 205
+++W K
Sbjct: 362 LRVWDYK 368
Score = 121 (47.7 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 34/116 (29%), Positives = 55/116 (47%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
+V+ + I+V D ++ GH DS+ +I L+ S S D +++LW+ Q
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH-SGKLLASCSADMTIKLWDFQG 181
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFT 216
CI G H + V SV P+ + I S D T+K+W ++ Y K+FT
Sbjct: 182 FECIRTMHG---HDHNVSSVAIMPNGDH-IVSASRDKTIKMWEVQT--GYCVKTFT 231
Score = 120 (47.3 bits), Expect = 0.00022, P = 0.00022
Identities = 28/107 (26%), Positives = 55/107 (51%)
Query: 99 PFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 158
PFL++G + I++ DVS + VGH + + + ++S + D+++R+W+
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHS-GGKFILSCADDKTLRVWDY 367
Query: 159 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
+ C+ H + V S+DFH + Y + + +D TVK+W +
Sbjct: 368 KNKRCMKTL---NAHEHFVTSLDFHKTAPY-VVTGSVDQTVKVWECR 410
Score = 108 (43.1 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 25/83 (30%), Positives = 44/83 (53%)
Query: 126 GHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDF-HP 184
GH + + P+ S++VSAS+D ++++W+ +TG G H + V + F H
Sbjct: 106 GHRSPVTRVIFHPVF-SVMVSASEDATIKVWDYETGDFERTLKG---HTDSVQDISFDHS 161
Query: 185 SDIYRIASCGMDNTVKIWSMKEF 207
+ +ASC D T+K+W + F
Sbjct: 162 GKL--LASCSADMTIKLWDFQGF 182
Score = 58 (25.5 bits), Expect = 8.5e-09, Sum P(2) = 8.5e-09
Identities = 16/57 (28%), Positives = 28/57 (49%)
Query: 309 GNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWD 365
G+R+ I +W++ S+ L+ + H + +R G ILSC +D + WD
Sbjct: 314 GSRDKTIKMWDV-STGMCLMTLVGH---DNWVRGVLFHSGGKFILSCADDKTLRVWD 366
Score = 50 (22.7 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 15/55 (27%), Positives = 25/55 (45%)
Query: 310 NREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRW 364
+R+ I +WE+Q+ V H + +R + DG+ I SC D + W
Sbjct: 211 SRDKTIKMWEVQTGYCVKTFT-GHREW---VRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 41 (19.5 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 250 GDFILSKSVDNEIVLWEPKMK 270
G FILS + D + +W+ K K
Sbjct: 350 GKFILSCADDKTLRVWDYKNK 370
Score = 37 (18.1 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 5/15 (33%), Positives = 11/15 (73%)
Query: 252 FILSKSVDNEIVLWE 266
++++ SVD + +WE
Sbjct: 394 YVVTGSVDQTVKVWE 408
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 143 (55.4 bits), Expect = 8.5e-09, Sum P(2) = 8.5e-09
Identities = 46/161 (28%), Positives = 77/161 (47%)
Query: 110 IRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAG 169
I++ D + ++ GH +++ + P +VSAS+D+++++W VQTG C+ F G
Sbjct: 174 IKLWDFQGFECIRTMHGHDHNVSSVAIMP-NGDHIVSASRDKTIKMWEVQTGYCVKTFTG 232
Query: 170 AGGHRNEVLSVDFHPS-DIYRIASCGMDNTVKIW--SMKEFWTYVEKSFTWTDLPSKFP- 225
HR V V P+ D IASC D TV++W + KE + + + S P
Sbjct: 233 ---HREWVRMV--RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Query: 226 TKYVQFPVFIASVHSNYVDCNRWLGDFILSKSVDNEIVLWE 266
+ Y I+ + + G F+LS S D I +W+
Sbjct: 288 SSYSS----ISEATGSETKKSGKPGPFLLSGSRDKTIKMWD 324
Score = 122 (48.0 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 24/67 (35%), Positives = 40/67 (59%)
Query: 140 KPS-LVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNT 198
KP ++S S+D+++++W+V TG+C++ G H N V V FH + I SC D T
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVG---HDNWVRGVLFHSGGKF-ILSCADDKT 361
Query: 199 VKIWSMK 205
+++W K
Sbjct: 362 LRVWDYK 368
Score = 121 (47.7 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 34/116 (29%), Positives = 55/116 (47%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
+V+ + I+V D ++ GH DS+ +I L+ S S D +++LW+ Q
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH-SGKLLASCSADMTIKLWDFQG 181
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFT 216
CI G H + V SV P+ + I S D T+K+W ++ Y K+FT
Sbjct: 182 FECIRTMHG---HDHNVSSVAIMPNGDH-IVSASRDKTIKMWEVQT--GYCVKTFT 231
Score = 120 (47.3 bits), Expect = 0.00022, P = 0.00022
Identities = 28/107 (26%), Positives = 55/107 (51%)
Query: 99 PFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 158
PFL++G + I++ DVS + VGH + + + ++S + D+++R+W+
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHS-GGKFILSCADDKTLRVWDY 367
Query: 159 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
+ C+ H + V S+DFH + Y + + +D TVK+W +
Sbjct: 368 KNKRCMKTL---NAHEHFVTSLDFHKTAPY-VVTGSVDQTVKVWECR 410
Score = 108 (43.1 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 25/83 (30%), Positives = 44/83 (53%)
Query: 126 GHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDF-HP 184
GH + + P+ S++VSAS+D ++++W+ +TG G H + V + F H
Sbjct: 106 GHRSPVTRVIFHPVF-SVMVSASEDATIKVWDYETGDFERTLKG---HTDSVQDISFDHS 161
Query: 185 SDIYRIASCGMDNTVKIWSMKEF 207
+ +ASC D T+K+W + F
Sbjct: 162 GKL--LASCSADMTIKLWDFQGF 182
Score = 58 (25.5 bits), Expect = 8.5e-09, Sum P(2) = 8.5e-09
Identities = 16/57 (28%), Positives = 28/57 (49%)
Query: 309 GNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWD 365
G+R+ I +W++ S+ L+ + H + +R G ILSC +D + WD
Sbjct: 314 GSRDKTIKMWDV-STGMCLMTLVGH---DNWVRGVLFHSGGKFILSCADDKTLRVWD 366
Score = 50 (22.7 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 15/55 (27%), Positives = 25/55 (45%)
Query: 310 NREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRW 364
+R+ I +WE+Q+ V H + +R + DG+ I SC D + W
Sbjct: 211 SRDKTIKMWEVQTGYCVKTFT-GHREW---VRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 41 (19.5 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 250 GDFILSKSVDNEIVLWEPKMK 270
G FILS + D + +W+ K K
Sbjct: 350 GKFILSCADDKTLRVWDYKNK 370
Score = 37 (18.1 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 5/15 (33%), Positives = 11/15 (73%)
Query: 252 FILSKSVDNEIVLWE 266
++++ SVD + +WE
Sbjct: 394 YVVTGSVDQTVKVWE 408
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 143 (55.4 bits), Expect = 8.5e-09, Sum P(2) = 8.5e-09
Identities = 46/161 (28%), Positives = 77/161 (47%)
Query: 110 IRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAG 169
I++ D + ++ GH +++ + P +VSAS+D+++++W VQTG C+ F G
Sbjct: 174 IKLWDFQGFECIRTMHGHDHNVSSVAIMP-NGDHIVSASRDKTIKMWEVQTGYCVKTFTG 232
Query: 170 AGGHRNEVLSVDFHPS-DIYRIASCGMDNTVKIW--SMKEFWTYVEKSFTWTDLPSKFP- 225
HR V V P+ D IASC D TV++W + KE + + + S P
Sbjct: 233 ---HREWVRMV--RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Query: 226 TKYVQFPVFIASVHSNYVDCNRWLGDFILSKSVDNEIVLWE 266
+ Y I+ + + G F+LS S D I +W+
Sbjct: 288 SSYSS----ISEATGSETKKSGKPGPFLLSGSRDKTIKMWD 324
Score = 122 (48.0 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 24/67 (35%), Positives = 40/67 (59%)
Query: 140 KPS-LVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNT 198
KP ++S S+D+++++W+V TG+C++ G H N V V FH + I SC D T
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVG---HDNWVRGVLFHSGGKF-ILSCADDKT 361
Query: 199 VKIWSMK 205
+++W K
Sbjct: 362 LRVWDYK 368
Score = 121 (47.7 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 34/116 (29%), Positives = 55/116 (47%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
+V+ + I+V D ++ GH DS+ +I L+ S S D +++LW+ Q
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH-SGKLLASCSADMTIKLWDFQG 181
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFT 216
CI G H + V SV P+ + I S D T+K+W ++ Y K+FT
Sbjct: 182 FECIRTMHG---HDHNVSSVAIMPNGDH-IVSASRDKTIKMWEVQT--GYCVKTFT 231
Score = 120 (47.3 bits), Expect = 0.00022, P = 0.00022
Identities = 28/107 (26%), Positives = 55/107 (51%)
Query: 99 PFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 158
PFL++G + I++ DVS + VGH + + + ++S + D+++R+W+
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHS-GGKFILSCADDKTLRVWDY 367
Query: 159 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
+ C+ H + V S+DFH + Y + + +D TVK+W +
Sbjct: 368 KNKRCMKTL---NAHEHFVTSLDFHKTAPY-VVTGSVDQTVKVWECR 410
Score = 108 (43.1 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 25/83 (30%), Positives = 44/83 (53%)
Query: 126 GHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDF-HP 184
GH + + P+ S++VSAS+D ++++W+ +TG G H + V + F H
Sbjct: 106 GHRSPVTRVIFHPVF-SVMVSASEDATIKVWDYETGDFERTLKG---HTDSVQDISFDHS 161
Query: 185 SDIYRIASCGMDNTVKIWSMKEF 207
+ +ASC D T+K+W + F
Sbjct: 162 GKL--LASCSADMTIKLWDFQGF 182
Score = 58 (25.5 bits), Expect = 8.5e-09, Sum P(2) = 8.5e-09
Identities = 16/57 (28%), Positives = 28/57 (49%)
Query: 309 GNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWD 365
G+R+ I +W++ S+ L+ + H + +R G ILSC +D + WD
Sbjct: 314 GSRDKTIKMWDV-STGMCLMTLVGH---DNWVRGVLFHSGGKFILSCADDKTLRVWD 366
Score = 50 (22.7 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 15/55 (27%), Positives = 25/55 (45%)
Query: 310 NREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRW 364
+R+ I +WE+Q+ V H + +R + DG+ I SC D + W
Sbjct: 211 SRDKTIKMWEVQTGYCVKTFT-GHREW---VRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 41 (19.5 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 250 GDFILSKSVDNEIVLWEPKMK 270
G FILS + D + +W+ K K
Sbjct: 350 GKFILSCADDKTLRVWDYKNK 370
Score = 37 (18.1 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 5/15 (33%), Positives = 11/15 (73%)
Query: 252 FILSKSVDNEIVLWE 266
++++ SVD + +WE
Sbjct: 394 YVVTGSVDQTVKVWE 408
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 143 (55.4 bits), Expect = 8.5e-09, Sum P(2) = 8.5e-09
Identities = 46/161 (28%), Positives = 77/161 (47%)
Query: 110 IRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAG 169
I++ D + ++ GH +++ + P +VSAS+D+++++W VQTG C+ F G
Sbjct: 174 IKLWDFQGFECIRTMHGHDHNVSSVAIMP-NGDHIVSASRDKTIKMWEVQTGYCVKTFTG 232
Query: 170 AGGHRNEVLSVDFHPS-DIYRIASCGMDNTVKIW--SMKEFWTYVEKSFTWTDLPSKFP- 225
HR V V P+ D IASC D TV++W + KE + + + S P
Sbjct: 233 ---HREWVRMV--RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Query: 226 TKYVQFPVFIASVHSNYVDCNRWLGDFILSKSVDNEIVLWE 266
+ Y I+ + + G F+LS S D I +W+
Sbjct: 288 SSYSS----ISEATGSETKKSGKPGPFLLSGSRDKTIKMWD 324
Score = 122 (48.0 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 24/67 (35%), Positives = 40/67 (59%)
Query: 140 KPS-LVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNT 198
KP ++S S+D+++++W+V TG+C++ G H N V V FH + I SC D T
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVG---HDNWVRGVLFHSGGKF-ILSCADDKT 361
Query: 199 VKIWSMK 205
+++W K
Sbjct: 362 LRVWDYK 368
Score = 121 (47.7 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 34/116 (29%), Positives = 55/116 (47%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
+V+ + I+V D ++ GH DS+ +I L+ S S D +++LW+ Q
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH-SGKLLASCSADMTIKLWDFQG 181
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFT 216
CI G H + V SV P+ + I S D T+K+W ++ Y K+FT
Sbjct: 182 FECIRTMHG---HDHNVSSVAIMPNGDH-IVSASRDKTIKMWEVQT--GYCVKTFT 231
Score = 120 (47.3 bits), Expect = 0.00022, P = 0.00022
Identities = 28/107 (26%), Positives = 55/107 (51%)
Query: 99 PFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 158
PFL++G + I++ DVS + VGH + + + ++S + D+++R+W+
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHS-GGKFILSCADDKTLRVWDY 367
Query: 159 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
+ C+ H + V S+DFH + Y + + +D TVK+W +
Sbjct: 368 KNKRCMKTL---NAHEHFVTSLDFHKTAPY-VVTGSVDQTVKVWECR 410
Score = 108 (43.1 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 25/83 (30%), Positives = 44/83 (53%)
Query: 126 GHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDF-HP 184
GH + + P+ S++VSAS+D ++++W+ +TG G H + V + F H
Sbjct: 106 GHRSPVTRVIFHPVF-SVMVSASEDATIKVWDYETGDFERTLKG---HTDSVQDISFDHS 161
Query: 185 SDIYRIASCGMDNTVKIWSMKEF 207
+ +ASC D T+K+W + F
Sbjct: 162 GKL--LASCSADMTIKLWDFQGF 182
Score = 58 (25.5 bits), Expect = 8.5e-09, Sum P(2) = 8.5e-09
Identities = 16/57 (28%), Positives = 28/57 (49%)
Query: 309 GNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWD 365
G+R+ I +W++ S+ L+ + H + +R G ILSC +D + WD
Sbjct: 314 GSRDKTIKMWDV-STGMCLMTLVGH---DNWVRGVLFHSGGKFILSCADDKTLRVWD 366
Score = 50 (22.7 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 15/55 (27%), Positives = 25/55 (45%)
Query: 310 NREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRW 364
+R+ I +WE+Q+ V H + +R + DG+ I SC D + W
Sbjct: 211 SRDKTIKMWEVQTGYCVKTFT-GHREW---VRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 41 (19.5 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 250 GDFILSKSVDNEIVLWEPKMK 270
G FILS + D + +W+ K K
Sbjct: 350 GKFILSCADDKTLRVWDYKNK 370
Score = 37 (18.1 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 5/15 (33%), Positives = 11/15 (73%)
Query: 252 FILSKSVDNEIVLWE 266
++++ SVD + +WE
Sbjct: 394 YVVTGSVDQTVKVWE 408
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 143 (55.4 bits), Expect = 8.5e-09, Sum P(2) = 8.5e-09
Identities = 46/161 (28%), Positives = 77/161 (47%)
Query: 110 IRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAG 169
I++ D + ++ GH +++ + P +VSAS+D+++++W VQTG C+ F G
Sbjct: 174 IKLWDFQGFECIRTMHGHDHNVSSVAIMP-NGDHIVSASRDKTIKMWEVQTGYCVKTFTG 232
Query: 170 AGGHRNEVLSVDFHPS-DIYRIASCGMDNTVKIW--SMKEFWTYVEKSFTWTDLPSKFP- 225
HR V V P+ D IASC D TV++W + KE + + + S P
Sbjct: 233 ---HREWVRMV--RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Query: 226 TKYVQFPVFIASVHSNYVDCNRWLGDFILSKSVDNEIVLWE 266
+ Y I+ + + G F+LS S D I +W+
Sbjct: 288 SSYSS----ISEATGSETKKSGKPGPFLLSGSRDKTIKMWD 324
Score = 122 (48.0 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 24/67 (35%), Positives = 40/67 (59%)
Query: 140 KPS-LVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNT 198
KP ++S S+D+++++W+V TG+C++ G H N V V FH + I SC D T
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVG---HDNWVRGVLFHSGGKF-ILSCADDKT 361
Query: 199 VKIWSMK 205
+++W K
Sbjct: 362 LRVWDYK 368
Score = 121 (47.7 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 34/116 (29%), Positives = 55/116 (47%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
+V+ + I+V D ++ GH DS+ +I L+ S S D +++LW+ Q
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH-SGKLLASCSADMTIKLWDFQG 181
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFT 216
CI G H + V SV P+ + I S D T+K+W ++ Y K+FT
Sbjct: 182 FECIRTMHG---HDHNVSSVAIMPNGDH-IVSASRDKTIKMWEVQT--GYCVKTFT 231
Score = 120 (47.3 bits), Expect = 0.00022, P = 0.00022
Identities = 28/107 (26%), Positives = 55/107 (51%)
Query: 99 PFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 158
PFL++G + I++ DVS + VGH + + + ++S + D+++R+W+
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHS-GGKFILSCADDKTLRVWDY 367
Query: 159 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
+ C+ H + V S+DFH + Y + + +D TVK+W +
Sbjct: 368 KNKRCMKTL---NAHEHFVTSLDFHKTAPY-VVTGSVDQTVKVWECR 410
Score = 108 (43.1 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 25/83 (30%), Positives = 44/83 (53%)
Query: 126 GHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDF-HP 184
GH + + P+ S++VSAS+D ++++W+ +TG G H + V + F H
Sbjct: 106 GHRSPVTRVIFHPVF-SVMVSASEDATIKVWDYETGDFERTLKG---HTDSVQDISFDHS 161
Query: 185 SDIYRIASCGMDNTVKIWSMKEF 207
+ +ASC D T+K+W + F
Sbjct: 162 GKL--LASCSADMTIKLWDFQGF 182
Score = 58 (25.5 bits), Expect = 8.5e-09, Sum P(2) = 8.5e-09
Identities = 16/57 (28%), Positives = 28/57 (49%)
Query: 309 GNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWD 365
G+R+ I +W++ S+ L+ + H + +R G ILSC +D + WD
Sbjct: 314 GSRDKTIKMWDV-STGMCLMTLVGH---DNWVRGVLFHSGGKFILSCADDKTLRVWD 366
Score = 50 (22.7 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 15/55 (27%), Positives = 25/55 (45%)
Query: 310 NREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRW 364
+R+ I +WE+Q+ V H + +R + DG+ I SC D + W
Sbjct: 211 SRDKTIKMWEVQTGYCVKTFT-GHREW---VRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 41 (19.5 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 250 GDFILSKSVDNEIVLWEPKMK 270
G FILS + D + +W+ K K
Sbjct: 350 GKFILSCADDKTLRVWDYKNK 370
Score = 37 (18.1 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 5/15 (33%), Positives = 11/15 (73%)
Query: 252 FILSKSVDNEIVLWE 266
++++ SVD + +WE
Sbjct: 394 YVVTGSVDQTVKVWE 408
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 143 (55.4 bits), Expect = 8.5e-09, Sum P(2) = 8.5e-09
Identities = 46/161 (28%), Positives = 77/161 (47%)
Query: 110 IRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAG 169
I++ D + ++ GH +++ + P +VSAS+D+++++W VQTG C+ F G
Sbjct: 174 IKLWDFQGFECIRTMHGHDHNVSSVAIMP-NGDHIVSASRDKTIKMWEVQTGYCVKTFTG 232
Query: 170 AGGHRNEVLSVDFHPS-DIYRIASCGMDNTVKIW--SMKEFWTYVEKSFTWTDLPSKFP- 225
HR V V P+ D IASC D TV++W + KE + + + S P
Sbjct: 233 ---HREWVRMV--RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Query: 226 TKYVQFPVFIASVHSNYVDCNRWLGDFILSKSVDNEIVLWE 266
+ Y I+ + + G F+LS S D I +W+
Sbjct: 288 SSYSS----ISEATGSETKKSGKPGPFLLSGSRDKTIKMWD 324
Score = 122 (48.0 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 24/67 (35%), Positives = 40/67 (59%)
Query: 140 KPS-LVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNT 198
KP ++S S+D+++++W+V TG+C++ G H N V V FH + I SC D T
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVG---HDNWVRGVLFHSGGKF-ILSCADDKT 361
Query: 199 VKIWSMK 205
+++W K
Sbjct: 362 LRVWDYK 368
Score = 121 (47.7 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 34/116 (29%), Positives = 55/116 (47%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
+V+ + I+V D ++ GH DS+ +I L+ S S D +++LW+ Q
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDH-SGKLLASCSADMTIKLWDFQG 181
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFT 216
CI G H + V SV P+ + I S D T+K+W ++ Y K+FT
Sbjct: 182 FECIRTMHG---HDHNVSSVAIMPNGDH-IVSASRDKTIKMWEVQT--GYCVKTFT 231
Score = 120 (47.3 bits), Expect = 0.00022, P = 0.00022
Identities = 28/107 (26%), Positives = 55/107 (51%)
Query: 99 PFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 158
PFL++G + I++ DVS + VGH + + + ++S + D+++R+W+
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHS-GGKFILSCADDKTLRVWDY 367
Query: 159 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
+ C+ H + V S+DFH + Y + + +D TVK+W +
Sbjct: 368 KNKRCMKTL---NAHEHFVTSLDFHKTAPY-VVTGSVDQTVKVWECR 410
Score = 107 (42.7 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 25/83 (30%), Positives = 44/83 (53%)
Query: 126 GHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDF-HP 184
GH + + P+ S++VSAS+D ++++W+ +TG G H + V + F H
Sbjct: 106 GHRSPVTRVIFHPVF-SVMVSASEDATIKVWDYETGDFERTLKG---HTDSVEDISFDHS 161
Query: 185 SDIYRIASCGMDNTVKIWSMKEF 207
+ +ASC D T+K+W + F
Sbjct: 162 GKL--LASCSADMTIKLWDFQGF 182
Score = 58 (25.5 bits), Expect = 8.5e-09, Sum P(2) = 8.5e-09
Identities = 16/57 (28%), Positives = 28/57 (49%)
Query: 309 GNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWD 365
G+R+ I +W++ S+ L+ + H + +R G ILSC +D + WD
Sbjct: 314 GSRDKTIKMWDV-STGMCLMTLVGH---DNWVRGVLFHSGGKFILSCADDKTLRVWD 366
Score = 50 (22.7 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 15/55 (27%), Positives = 25/55 (45%)
Query: 310 NREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRW 364
+R+ I +WE+Q+ V H + +R + DG+ I SC D + W
Sbjct: 211 SRDKTIKMWEVQTGYCVKTFT-GHREW---VRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 41 (19.5 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 250 GDFILSKSVDNEIVLWEPKMK 270
G FILS + D + +W+ K K
Sbjct: 350 GKFILSCADDKTLRVWDYKNK 370
Score = 37 (18.1 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 5/15 (33%), Positives = 11/15 (73%)
Query: 252 FILSKSVDNEIVLWE 266
++++ SVD + +WE
Sbjct: 394 YVVTGSVDQTVKVWE 408
>UNIPROTKB|E2RFV0 [details] [associations]
symbol:WSB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0035556
"intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 CTD:26118 KO:K10341 OMA:GHHNDVV
EMBL:AAEX03006660 RefSeq:XP_853945.1 ProteinModelPortal:E2RFV0
Ensembl:ENSCAFT00000029577 GeneID:480619 KEGG:cfa:480619
NextBio:20855611 Uniprot:E2RFV0
Length = 421
Score = 134 (52.2 bits), Expect = 9.3e-09, Sum P(2) = 9.3e-09
Identities = 36/115 (31%), Positives = 64/115 (55%)
Query: 101 LVAGGIN-GIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 159
L+A G+N G I++ DV KL + V H + + ++ P ++VSAS+D+++R+W+++
Sbjct: 142 LLATGLNNGRIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLK 201
Query: 160 T-GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEK 213
G + + G H+N V S F P D + S G V +W+M ++ T + K
Sbjct: 202 DDGNMMKVLRG---HQNWVYSCAFSP-DSSMLCSVGASKAVFLWNMDKY-TMIRK 251
Score = 68 (29.0 bits), Expect = 9.3e-09, Sum P(2) = 9.3e-09
Identities = 33/140 (23%), Positives = 58/140 (41%)
Query: 239 HSNYVDCNRWL-GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPEC------- 290
H + V C+ G + + S D + +W+P G+ + +P P
Sbjct: 256 HHDVVACDFSPDGALLATASYDTRVYIWDPHN-----GDILMEFGHLFPPPTPIFAGGAN 310
Query: 291 DIWF--IKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYD 348
D W + FS D + A++ + + + W + PV +A LS+ A S D
Sbjct: 311 DRWVRSVSFSHD-GLHVASLAD-DKMVRFWRIDEDYPVQVAPLSNGLC------CAFSTD 362
Query: 349 GSTILSCCEDGAIWRWDAIP 368
GS + + DG+++ W A P
Sbjct: 363 GSVLAAGTHDGSVYFW-ATP 381
Score = 39 (18.8 bits), Expect = 8.8e-06, Sum P(2) = 8.8e-06
Identities = 10/38 (26%), Positives = 17/38 (44%)
Query: 299 CDFHYNAA--AIGNREGKIFVWELQSSPPVL--IARLS 332
C F + + A G +G ++ W P L + R+S
Sbjct: 357 CAFSTDGSVLAAGTHDGSVYFWATPRQVPSLQHLCRMS 394
>UNIPROTKB|Q9Y6I7 [details] [associations]
symbol:WSB1 "WD repeat and SOCS box-containing protein 1"
species:9606 "Homo sapiens" [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Reactome:REACT_6900
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622 CTD:26118
HOGENOM:HOG000063727 HOVERGEN:HBG034543 KO:K10341 OMA:GHHNDVV
OrthoDB:EOG40ZQXJ EMBL:AF072880 EMBL:AF069313 EMBL:AF240696
EMBL:AL110243 EMBL:AF112205 EMBL:AF106683 EMBL:AL110269
EMBL:BC021110 IPI:IPI00107502 IPI:IPI00146203 IPI:IPI00794974
PIR:T14773 PIR:T14788 RefSeq:NP_056441.6 RefSeq:NP_599027.1
UniGene:Hs.446017 ProteinModelPortal:Q9Y6I7 SMR:Q9Y6I7
IntAct:Q9Y6I7 STRING:Q9Y6I7 PhosphoSite:Q9Y6I7 DMDM:20532298
PaxDb:Q9Y6I7 PRIDE:Q9Y6I7 DNASU:26118 Ensembl:ENST00000262394
Ensembl:ENST00000348811 GeneID:26118 KEGG:hsa:26118 UCSC:uc002gzd.1
UCSC:uc002gze.1 GeneCards:GC17P025621 HGNC:HGNC:19221 HPA:HPA003293
MIM:610091 neXtProt:NX_Q9Y6I7 PharmGKB:PA134867554
InParanoid:Q9Y6I7 PhylomeDB:Q9Y6I7 ChiTaRS:WSB1 GenomeRNAi:26118
NextBio:48120 ArrayExpress:Q9Y6I7 Bgee:Q9Y6I7 CleanEx:HS_WSB1
Genevestigator:Q9Y6I7 GermOnline:ENSG00000109046 Uniprot:Q9Y6I7
Length = 421
Score = 134 (52.2 bits), Expect = 9.3e-09, Sum P(2) = 9.3e-09
Identities = 36/115 (31%), Positives = 64/115 (55%)
Query: 101 LVAGGIN-GIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 159
L+A G+N G I++ DV KL + V H + + ++ P ++VSAS+D+++R+W+++
Sbjct: 142 LLATGLNNGRIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLK 201
Query: 160 T-GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEK 213
G + + G H+N V S F P D + S G V +W+M ++ T + K
Sbjct: 202 DDGNMMKVLRG---HQNWVYSCAFSP-DSSMLCSVGASKAVFLWNMDKY-TMIRK 251
Score = 68 (29.0 bits), Expect = 9.3e-09, Sum P(2) = 9.3e-09
Identities = 33/140 (23%), Positives = 58/140 (41%)
Query: 239 HSNYVDCNRWL-GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPEC------- 290
H + V C+ G + + S D + +W+P G+ + +P P
Sbjct: 256 HHDVVACDFSPDGALLATASYDTRVYIWDPHN-----GDILMEFGHLFPPPTPIFAGGAN 310
Query: 291 DIWF--IKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYD 348
D W + FS D + A++ + + + W + PV +A LS+ A S D
Sbjct: 311 DRWVRSVSFSHD-GLHVASLAD-DKMVRFWRIDEDYPVQVAPLSNGLC------CAFSTD 362
Query: 349 GSTILSCCEDGAIWRWDAIP 368
GS + + DG+++ W A P
Sbjct: 363 GSVLAAGTHDGSVYFW-ATP 381
Score = 39 (18.8 bits), Expect = 8.8e-06, Sum P(2) = 8.8e-06
Identities = 10/38 (26%), Positives = 17/38 (44%)
Query: 299 CDFHYNAA--AIGNREGKIFVWELQSSPPVL--IARLS 332
C F + + A G +G ++ W P L + R+S
Sbjct: 357 CAFSTDGSVLAAGTHDGSVYFWATPRQVPSLQHLCRMS 394
>UNIPROTKB|E1BBZ9 [details] [associations]
symbol:WSB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0035556
"intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 CTD:26118 KO:K10341 OMA:GHHNDVV
EMBL:DAAA02048546 IPI:IPI00718427 RefSeq:XP_002695684.2
RefSeq:XP_885171.4 UniGene:Bt.20080 ProteinModelPortal:E1BBZ9
Ensembl:ENSBTAT00000006593 GeneID:614851 KEGG:bta:614851
Uniprot:E1BBZ9
Length = 421
Score = 134 (52.2 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 36/115 (31%), Positives = 64/115 (55%)
Query: 101 LVAGGIN-GIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 159
L+A G+N G I++ DV KL + V H + + ++ P ++VSAS+D+++R+W+++
Sbjct: 142 LLATGLNNGRIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLK 201
Query: 160 T-GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEK 213
G + + G H+N V S F P D + S G V +W+M ++ T + K
Sbjct: 202 DDGNMMKVLRG---HQNWVYSCAFSP-DSSMLCSVGASKAVFLWNMDKY-TMIRK 251
Score = 66 (28.3 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 33/140 (23%), Positives = 57/140 (40%)
Query: 239 HSNYVDCNRWL-GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPEC------- 290
H + V C+ G + + S D + +W+P G + +P P
Sbjct: 256 HHDVVACDFSPDGALLATASYDTRVYIWDPHT-----GAILMEFGHLFPPPTPIFAGGAN 310
Query: 291 DIWF--IKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYD 348
D W + FS D + A++ + + + W + PV +A LS+ A S D
Sbjct: 311 DRWVRSVSFSHD-GLHVASLAD-DKMVRFWRIDEDYPVQVAPLSNGLC------CAFSTD 362
Query: 349 GSTILSCCEDGAIWRWDAIP 368
GS + + DG+++ W A P
Sbjct: 363 GSVLAAGTHDGSVYFW-ATP 381
Score = 39 (18.8 bits), Expect = 8.8e-06, Sum P(2) = 8.8e-06
Identities = 10/38 (26%), Positives = 17/38 (44%)
Query: 299 CDFHYNAA--AIGNREGKIFVWELQSSPPVL--IARLS 332
C F + + A G +G ++ W P L + R+S
Sbjct: 357 CAFSTDGSVLAAGTHDGSVYFWATPRQVPSLQHLCRMS 394
>GENEDB_PFALCIPARUM|PFC0100c [details] [associations]
symbol:PFC0100c "regulatory protein, putative"
species:5833 "Plasmodium falciparum" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
EMBL:AL844502 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_001351097.1
ProteinModelPortal:O97334 IntAct:O97334 MINT:MINT-1755911
EnsemblProtists:PFC0100c:mRNA GeneID:814338 KEGG:pfa:PFC0100c
EuPathDB:PlasmoDB:PF3D7_0302000 OMA:GHINSIR ProtClustDB:CLSZ2733686
Uniprot:O97334
Length = 600
Score = 159 (61.0 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 34/105 (32%), Positives = 58/105 (55%)
Query: 98 IPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWN 157
+ L++GG + ++RV D+ + GH ++ I +Q ++P VVS S+D+ +RLW+
Sbjct: 382 LDLLMSGGRDAVVRVWDIRTKSSVFVLSGHTGTVMSICSQSVEPQ-VVSGSQDKMIRLWD 440
Query: 158 VQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIW 202
+ G C + H+ + S+ HP + Y SCG DN VK+W
Sbjct: 441 LNNGKCRISLTH---HKKSIRSLSIHPFE-YSFCSCGTDN-VKVW 480
>UNIPROTKB|O97334 [details] [associations]
symbol:PFC0100c "Regulatory protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
EMBL:AL844502 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_001351097.1
ProteinModelPortal:O97334 IntAct:O97334 MINT:MINT-1755911
EnsemblProtists:PFC0100c:mRNA GeneID:814338 KEGG:pfa:PFC0100c
EuPathDB:PlasmoDB:PF3D7_0302000 OMA:GHINSIR ProtClustDB:CLSZ2733686
Uniprot:O97334
Length = 600
Score = 159 (61.0 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 34/105 (32%), Positives = 58/105 (55%)
Query: 98 IPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWN 157
+ L++GG + ++RV D+ + GH ++ I +Q ++P VVS S+D+ +RLW+
Sbjct: 382 LDLLMSGGRDAVVRVWDIRTKSSVFVLSGHTGTVMSICSQSVEPQ-VVSGSQDKMIRLWD 440
Query: 158 VQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIW 202
+ G C + H+ + S+ HP + Y SCG DN VK+W
Sbjct: 441 LNNGKCRISLTH---HKKSIRSLSIHPFE-YSFCSCGTDN-VKVW 480
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 140 (54.3 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 45/161 (27%), Positives = 77/161 (47%)
Query: 110 IRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAG 169
I++ D + ++ GH +++ + P +VSA++D+++++W VQTG C+ F G
Sbjct: 174 IKLWDFQGFECIRTMHGHDHNVSSVAIMP-NGDHIVSAARDKTIKMWEVQTGYCVKTFTG 232
Query: 170 AGGHRNEVLSVDFHPS-DIYRIASCGMDNTVKIW--SMKEFWTYVEKSFTWTDLPSKFP- 225
HR V V P+ D IASC D TV++W + KE + + + S P
Sbjct: 233 ---HREWVRMV--RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Query: 226 TKYVQFPVFIASVHSNYVDCNRWLGDFILSKSVDNEIVLWE 266
+ Y I+ + + G F+LS S D I +W+
Sbjct: 288 SSYSS----ISEATGSETKKSGKPGPFLLSGSRDKTIKMWD 324
Score = 122 (48.0 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 24/67 (35%), Positives = 40/67 (59%)
Query: 140 KPS-LVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNT 198
KP ++S S+D+++++W+V TG+C++ G H N V V FH + I SC D T
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVG---HDNWVRGVLFHSGGKF-ILSCADDKT 361
Query: 199 VKIWSMK 205
+++W K
Sbjct: 362 LRVWDYK 368
Score = 121 (47.7 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 34/116 (29%), Positives = 55/116 (47%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
+V+ + I+V D ++ GH DS+ +I L+ S S D +++LW+ Q
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH-SGKLLASCSADMTIKLWDFQG 181
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFT 216
CI G H + V SV P+ + I S D T+K+W ++ Y K+FT
Sbjct: 182 FECIRTMHG---HDHNVSSVAIMPNGDH-IVSAARDKTIKMWEVQT--GYCVKTFT 231
Score = 120 (47.3 bits), Expect = 0.00022, P = 0.00022
Identities = 28/107 (26%), Positives = 55/107 (51%)
Query: 99 PFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 158
PFL++G + I++ DVS + VGH + + + ++S + D+++R+W+
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHS-GGKFILSCADDKTLRVWDY 367
Query: 159 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
+ C+ H + V S+DFH + Y + + +D TVK+W +
Sbjct: 368 KNKRCMKTL---NAHEHFVTSLDFHKTAPY-VVTGSVDQTVKVWECR 410
Score = 108 (43.1 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 25/83 (30%), Positives = 44/83 (53%)
Query: 126 GHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDF-HP 184
GH + + P+ S++VSAS+D ++++W+ +TG G H + V + F H
Sbjct: 106 GHRSPVTRVIFHPVF-SVMVSASEDATIKVWDYETGDFERTLKG---HTDSVQDISFDHS 161
Query: 185 SDIYRIASCGMDNTVKIWSMKEF 207
+ +ASC D T+K+W + F
Sbjct: 162 GKL--LASCSADMTIKLWDFQGF 182
Score = 58 (25.5 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 16/57 (28%), Positives = 28/57 (49%)
Query: 309 GNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWD 365
G+R+ I +W++ S+ L+ + H + +R G ILSC +D + WD
Sbjct: 314 GSRDKTIKMWDV-STGMCLMTLVGH---DNWVRGVLFHSGGKFILSCADDKTLRVWD 366
Score = 49 (22.3 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 15/54 (27%), Positives = 24/54 (44%)
Query: 311 REGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRW 364
R+ I +WE+Q+ V H + +R + DG+ I SC D + W
Sbjct: 212 RDKTIKMWEVQTGYCVKTFT-GHREW---VRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 41 (19.5 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 250 GDFILSKSVDNEIVLWEPKMK 270
G FILS + D + +W+ K K
Sbjct: 350 GKFILSCADDKTLRVWDYKNK 370
Score = 37 (18.1 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 5/15 (33%), Positives = 11/15 (73%)
Query: 252 FILSKSVDNEIVLWE 266
++++ SVD + +WE
Sbjct: 394 YVVTGSVDQTVKVWE 408
>MGI|MGI:1926139 [details] [associations]
symbol:Wsb1 "WD repeat and SOCS box-containing 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0035556 "intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 MGI:MGI:1926139
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622 CTD:26118
HOGENOM:HOG000063727 HOVERGEN:HBG034543 KO:K10341 OMA:GHHNDVV
OrthoDB:EOG40ZQXJ ChiTaRS:WSB1 EMBL:AF033186 IPI:IPI00119829
RefSeq:NP_062627.3 UniGene:Mm.307022 UniGene:Mm.474790
ProteinModelPortal:O54927 SMR:O54927 IntAct:O54927 STRING:O54927
PhosphoSite:O54927 PRIDE:O54927 Ensembl:ENSMUST00000017821
GeneID:78889 KEGG:mmu:78889 InParanoid:O54927 NextBio:349672
Bgee:O54927 CleanEx:MM_WSB1 Genevestigator:O54927
GermOnline:ENSMUSG00000017677 Uniprot:O54927
Length = 421
Score = 132 (51.5 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 36/115 (31%), Positives = 63/115 (54%)
Query: 101 LVAGGIN-GIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 159
L+A G+N G I++ DV KL + V H + + ++ P L+VSAS+D+++R+W+++
Sbjct: 142 LLATGLNNGRIKIWDVYTGKLLLNLVDHIEMVRDLTFAPDGSLLLVSASRDKTLRVWDLK 201
Query: 160 T-GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEK 213
G + + H+N V S F P D + S G V +W+M ++ T + K
Sbjct: 202 DDGNMVKVLRA---HQNWVYSCAFSP-DCSMLCSVGASKAVFLWNMDKY-TMIRK 251
Score = 67 (28.6 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 34/138 (24%), Positives = 57/138 (41%)
Query: 239 HSNYVDCNRWL-GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVP-----ECDI 292
H + V C+ G + + S D + +W+P + G L P P D
Sbjct: 256 HHDVVACDFSPDGALLATASYDTRVYVWDPHNGDLLMEFGH---LFPSPTPIFAGGANDR 312
Query: 293 WF--IKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGS 350
W + FS D + A++ + + + W + PV +A LS+ A S DGS
Sbjct: 313 WVRAVSFSHD-GLHVASLAD-DKMVRFWRIDEDCPVQVAPLSNGLC------CAFSTDGS 364
Query: 351 TILSCCEDGAIWRWDAIP 368
+ + DG+++ W A P
Sbjct: 365 VLAAGTHDGSVYFW-ATP 381
Score = 41 (19.5 bits), Expect = 9.3e-06, Sum P(2) = 9.3e-06
Identities = 11/38 (28%), Positives = 17/38 (44%)
Query: 299 CDFHYNAA--AIGNREGKIFVWELQSSPPVL--IARLS 332
C F + + A G +G ++ W P L I R+S
Sbjct: 357 CAFSTDGSVLAAGTHDGSVYFWATPRQVPSLQHICRMS 394
>RGD|1310215 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II, p300/CBP-associated
factor (PCAF)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] [GO:0004402 "histone
acetyltransferase activity" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310215 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
EMBL:BC098861 IPI:IPI00359892 UniGene:Rn.23853
ProteinModelPortal:Q4G004 UCSC:RGD:1310215 InParanoid:Q4G004
ArrayExpress:Q4G004 Genevestigator:Q4G004 Uniprot:Q4G004
Length = 143
Score = 115 (45.5 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 25/82 (30%), Positives = 44/82 (53%)
Query: 124 FVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFH 183
F GH + + P + SA +D+ ++LW++ +G +F GH + + S+ F
Sbjct: 18 FTGHRGPVLSLSFSP-NGKYLASAGEDQRLKLWDLASGT---LFKELRGHTDSITSLAFS 73
Query: 184 PSDIYRIASCGMDNTVKIWSMK 205
P D IAS MDN+V++W ++
Sbjct: 74 P-DSGLIASASMDNSVRVWDIR 94
Score = 113 (44.8 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 150 DESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
D++VRLW+ Q G + +F G HR VLS+ F P+ Y +AS G D +K+W +
Sbjct: 1 DKTVRLWSAQQGNSVRLFTG---HRGPVLSLSFSPNGKY-LASAGEDQRLKLWDL 51
Score = 107 (42.7 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 29/106 (27%), Positives = 51/106 (48%)
Query: 100 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 159
+L + G + +++ D+++ L K GH DSI + P L+ SAS D SVR+W+++
Sbjct: 36 YLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSP-DSGLIASASMDNSVRVWDIR 94
Query: 160 TGICILIFAGAGGH--------RNEVLSVDFHPSDIYRIASCGMDN 197
+ C G+ G + VLSV F ++ + +N
Sbjct: 95 STCCNTPADGSSGELVGVYTGQMSNVLSVQFMACNLLLVTGITQEN 140
Score = 42 (19.8 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 11/51 (21%), Positives = 29/51 (56%)
Query: 253 ILSKSVDNEIVLWEPKMKE-QSPGEGTA-DILQKYPVPECDIWFIKF-SCD 300
I S S+DN + +W+ + +P +G++ +++ Y ++ ++F +C+
Sbjct: 79 IASASMDNSVRVWDIRSTCCNTPADGSSGELVGVYTGQMSNVLSVQFMACN 129
>UNIPROTKB|Q6PBD6 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:BC059759 RefSeq:NP_988871.1 UniGene:Str.5901
ProteinModelPortal:Q6PBD6 Ensembl:ENSXETT00000020997 GeneID:394466
KEGG:xtr:394466 Xenbase:XB-GENE-5751496 InParanoid:Q6PBD6
Bgee:Q6PBD6 Uniprot:Q6PBD6
Length = 305
Score = 153 (58.9 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 49/176 (27%), Positives = 89/176 (50%)
Query: 29 LQEGKRPLYAVVFNFIDSRYFNVFATVGGNRVTVYQCLEGGVIAALQSYVDEDKEESFYT 88
+ G ++V F+ DS++ + VG +V ++ GV + Y + + + +
Sbjct: 102 IDAGPVDAWSVAFS-PDSQHLATGSHVG--KVNIF-----GVETGKKEYSLDTRGK--FI 151
Query: 89 VSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSAS 148
+S A + DG +L +G I+GII + D++ KL + GH I + P L+V+AS
Sbjct: 152 LSIAYSPDG-KYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP-DSQLLVTAS 209
Query: 149 KDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
D ++++ VQ + A GH + VL+V F P D + ++S D +VK+W +
Sbjct: 210 DDGYIKIYEVQHAS---LAATLSGHGSWVLNVAFSPDDTHFVSSSS-DKSVKVWDV 261
>UNIPROTKB|F1RKU4 [details] [associations]
symbol:WDR61 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001162 "positive regulation of histone H3-K79
methylation" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:0055087 "Ski complex"
evidence=IEA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0035327 "transcriptionally active chromatin"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0016593 "Cdc73/Paf1 complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GeneTree:ENSGT00700000104507
GO:GO:0055087 EMBL:CU467054 Ensembl:ENSSSCT00000001963 OMA:PPSEVWG
Uniprot:F1RKU4
Length = 287
Score = 152 (58.6 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 48/161 (29%), Positives = 83/161 (51%)
Query: 45 DSRYFNVFATVGGNRVTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAG 104
DS+Y VG +V ++ GV + + Y + + + + +S A + DG +L +G
Sbjct: 99 DSQYLATGTHVG--KVNIF-----GVESGKKEYSLDTRGK--FILSIAYSPDG-KYLASG 148
Query: 105 GINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICI 164
I+GII + D++ KL + GH I + P L+V+AS D +++++VQ
Sbjct: 149 AIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP-DSQLLVTASDDGYIKIYDVQHAN-- 205
Query: 165 LIFAGA-GGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
AG GH + VL+V F P D + ++S D +VK+W +
Sbjct: 206 --LAGTLSGHASWVLNVAFCPDDTHFVSSSS-DKSVKVWDV 243
>UNIPROTKB|H0YN81 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC090607 HGNC:HGNC:30300 ChiTaRS:WDR61
Ensembl:ENST00000560569 Bgee:H0YN81 Uniprot:H0YN81
Length = 294
Score = 152 (58.6 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 48/161 (29%), Positives = 83/161 (51%)
Query: 45 DSRYFNVFATVGGNRVTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAG 104
DS+Y VG +V ++ GV + + Y + + + + +S A + DG +L +G
Sbjct: 117 DSQYLATGTHVG--KVNIF-----GVESGKKEYSLDTRGK--FILSIAYSPDG-KYLASG 166
Query: 105 GINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICI 164
I+GII + D++ KL + GH I + P L+V+AS D +++++VQ
Sbjct: 167 AIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP-DSQLLVTASDDGYIKIYDVQHAN-- 223
Query: 165 LIFAGA-GGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
AG GH + VL+V F P D + ++S D +VK+W +
Sbjct: 224 --LAGTLSGHASWVLNVAFCPDDTHFVSSSS-DKSVKVWDV 261
>UNIPROTKB|Q32LN7 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9913
"Bos taurus" [GO:0080182 "histone H3-K4 trimethylation"
evidence=ISS] [GO:0055087 "Ski complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:2001162 "positive regulation of histone H3-K79 methylation"
evidence=ISS] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=ISS] [GO:0045638 "negative regulation of
myeloid cell differentiation" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISS] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0035327 GO:GO:0051571 GO:GO:0032968 GO:GO:0080182
GO:GO:0016593 GO:GO:0045638 GO:GO:2001162
GeneTree:ENSGT00700000104507 GO:GO:0055087 EMBL:BC109495
IPI:IPI00695868 RefSeq:NP_001033186.1 UniGene:Bt.20040
ProteinModelPortal:Q32LN7 PRIDE:Q32LN7 Ensembl:ENSBTAT00000021203
GeneID:513208 KEGG:bta:513208 CTD:80349 HOGENOM:HOG000036765
HOVERGEN:HBG059813 InParanoid:Q32LN7 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW NextBio:20870747 Uniprot:Q32LN7
Length = 305
Score = 152 (58.6 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 48/161 (29%), Positives = 83/161 (51%)
Query: 45 DSRYFNVFATVGGNRVTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAG 104
DS+Y VG +V ++ GV + + Y + + + + +S A + DG +L +G
Sbjct: 117 DSQYLATGTHVG--KVNIF-----GVESGKKEYSLDTRGK--FILSIAYSPDG-KYLASG 166
Query: 105 GINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICI 164
I+GII + D++ KL + GH I + P L+V+AS D +++++VQ
Sbjct: 167 AIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP-DSQLLVTASDDGYIKIYDVQHAN-- 223
Query: 165 LIFAGA-GGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
AG GH + VL+V F P D + ++S D +VK+W +
Sbjct: 224 --LAGTLSGHASWVLNVAFCPDDTHFVSSSS-DKSVKVWDV 261
>UNIPROTKB|E2RBV0 [details] [associations]
symbol:WDR61 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2001162 "positive regulation of histone
H3-K79 methylation" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:0055087 "Ski complex"
evidence=IEA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0035327 "transcriptionally active chromatin"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0016593 "Cdc73/Paf1 complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
KO:K12602 OMA:IATGSHH EMBL:AAEX03002395 EMBL:AAEX03002396
RefSeq:XP_536215.2 ProteinModelPortal:E2RBV0
Ensembl:ENSCAFT00000022589 GeneID:479068 KEGG:cfa:479068
NextBio:20854309 Uniprot:E2RBV0
Length = 305
Score = 152 (58.6 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 48/161 (29%), Positives = 83/161 (51%)
Query: 45 DSRYFNVFATVGGNRVTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAG 104
DS+Y VG +V ++ GV + + Y + + + + +S A + DG +L +G
Sbjct: 117 DSQYLATGTHVG--KVNIF-----GVESGKKEYSLDTRGK--FILSIAYSPDG-KYLASG 166
Query: 105 GINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICI 164
I+GII + D++ KL + GH I + P L+V+AS D +++++VQ
Sbjct: 167 AIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP-DSQLLVTASDDGYIKIYDVQHAN-- 223
Query: 165 LIFAGA-GGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
AG GH + VL+V F P D + ++S D +VK+W +
Sbjct: 224 --LAGTLSGHASWVLNVAFCPDDTHFVSSSS-DKSVKVWDV 261
>UNIPROTKB|Q9GZS3 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=IDA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0045638 "negative regulation of myeloid cell
differentiation" evidence=IDA] [GO:0055087 "Ski complex"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0035327 "transcriptionally active
chromatin" evidence=IDA] [GO:0051571 "positive regulation of
histone H3-K4 methylation" evidence=IMP] [GO:2001162 "positive
regulation of histone H3-K79 methylation" evidence=IMP] [GO:0080182
"histone H3-K4 trimethylation" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 EMBL:CH471136 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:AF309553 EMBL:AF100786 EMBL:AF127799
EMBL:AK024754 EMBL:CR457333 EMBL:BC010080 IPI:IPI00019269
RefSeq:NP_079510.1 UniGene:Hs.513055 PDB:3OW8 PDBsum:3OW8
ProteinModelPortal:Q9GZS3 SMR:Q9GZS3 DIP:DIP-36672N IntAct:Q9GZS3
MINT:MINT-1376321 STRING:Q9GZS3 PhosphoSite:Q9GZS3 DMDM:74761365
PaxDb:Q9GZS3 PeptideAtlas:Q9GZS3 PRIDE:Q9GZS3 DNASU:80349
Ensembl:ENST00000267973 Ensembl:ENST00000558311 GeneID:80349
KEGG:hsa:80349 UCSC:uc002bdn.3 GeneCards:GC15M078575
HGNC:HGNC:30300 HPA:HPA039932 HPA:HPA040065 MIM:609540
neXtProt:NX_Q9GZS3 PharmGKB:PA142670595 InParanoid:Q9GZS3
PhylomeDB:Q9GZS3 ChiTaRS:WDR61 EvolutionaryTrace:Q9GZS3
GenomeRNAi:80349 NextBio:70956 Bgee:Q9GZS3 CleanEx:HS_WDR61
Genevestigator:Q9GZS3 GermOnline:ENSG00000140395 Uniprot:Q9GZS3
Length = 305
Score = 152 (58.6 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 48/161 (29%), Positives = 83/161 (51%)
Query: 45 DSRYFNVFATVGGNRVTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAG 104
DS+Y VG +V ++ GV + + Y + + + + +S A + DG +L +G
Sbjct: 117 DSQYLATGTHVG--KVNIF-----GVESGKKEYSLDTRGK--FILSIAYSPDG-KYLASG 166
Query: 105 GINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICI 164
I+GII + D++ KL + GH I + P L+V+AS D +++++VQ
Sbjct: 167 AIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP-DSQLLVTASDDGYIKIYDVQHAN-- 223
Query: 165 LIFAGA-GGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
AG GH + VL+V F P D + ++S D +VK+W +
Sbjct: 224 --LAGTLSGHASWVLNVAFCPDDTHFVSSSS-DKSVKVWDV 261
>TAIR|locus:2194060 [details] [associations]
symbol:ATARCA "AT1G18080" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP;RCA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006417
"regulation of translation" evidence=IGI] [GO:0009845 "seed
germination" evidence=IGI] [GO:0042254 "ribosome biogenesis"
evidence=IGI] [GO:0071215 "cellular response to abscisic acid
stimulus" evidence=IEP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006096
"glycolysis" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] [GO:0009651 "response to salt
stress" evidence=RCA] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] [GO:0010476 "gibberellin mediated signaling
pathway" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009507 GO:GO:0046686 GO:GO:0006417 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042254 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0022626 EMBL:AC034107
EMBL:AC069551 EMBL:U77381 EMBL:AY035007 EMBL:AY063016 EMBL:AK318781
EMBL:AY088480 IPI:IPI00524816 IPI:IPI00930983 RefSeq:NP_173248.1
UniGene:At.22612 UniGene:At.67882 PDB:3DM0 PDBsum:3DM0
ProteinModelPortal:O24456 SMR:O24456 IntAct:O24456 STRING:O24456
PaxDb:O24456 PRIDE:O24456 EnsemblPlants:AT1G18080.1 GeneID:838388
KEGG:ath:AT1G18080 GeneFarm:2809 TAIR:At1g18080
HOGENOM:HOG000091643 InParanoid:O24456 KO:K14753 OMA:IRVWQVM
PhylomeDB:O24456 ProtClustDB:CLSN2682135 EvolutionaryTrace:O24456
Genevestigator:O24456 GermOnline:AT1G18080 GO:GO:0010476
Uniprot:O24456
Length = 327
Score = 147 (56.8 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 38/111 (34%), Positives = 59/111 (53%)
Query: 96 DGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRL 155
DG F ++G +G +R+ D++ + FVGH + + L +VSAS+D +++L
Sbjct: 74 DG-QFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFS-LDNRQIVSASRDRTIKL 131
Query: 156 WNVQTGIC-ILIFAGAGGHRNEVLSVDFHPSDIY-RIASCGMDNTVKIWSM 204
WN G C I G GHR+ V V F P+ + I S D TVK+W++
Sbjct: 132 WNT-LGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNL 181
Score = 44 (20.5 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 10/19 (52%), Positives = 11/19 (57%)
Query: 346 SYDGSTILSCCEDGAIWRW 364
S DGST+ S DG I W
Sbjct: 304 SADGSTLFSGYTDGVIRVW 322
Score = 40 (19.1 bits), Expect = 7.8e-08, Sum P(2) = 7.8e-08
Identities = 14/59 (23%), Positives = 25/59 (42%)
Query: 307 AIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWD 365
A G ++G + +W+L +L ++ S I S + + + E G I WD
Sbjct: 210 ASGGKDGVVLLWDLAEGK-----KLYSLEANSVIHALCFSPNRYWLCAATEHG-IKIWD 262
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 131 (51.2 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 34/102 (33%), Positives = 54/102 (52%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
+V + +++ +V K+ K+ GH + + P + SLVVS S DESVR+W+V+T
Sbjct: 136 IVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNP-QSSLVVSGSFDESVRIWDVRT 194
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIW 202
G+C+ H + V +V F+ D I S D V+IW
Sbjct: 195 GMCVKTLPA---HSDPVSAVSFN-RDGSLITSGSYDGLVRIW 232
Score = 119 (46.9 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 33/113 (29%), Positives = 51/113 (45%)
Query: 91 WACNVDGIPFLV-AGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASK 149
+ CN + LV +G + +R+ DV K+ H D ++ + SL+ S S
Sbjct: 167 FCCNFNPQSSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNR-DGSLITSGSY 225
Query: 150 DESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIW 202
D VR+W+ G C+ V V F P+ Y I S +DNT+K+W
Sbjct: 226 DGLVRIWDTANGQCVKTLVD--DENPPVAFVKFSPNGKY-ILSSNLDNTLKLW 275
Score = 96 (38.9 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 24/106 (22%), Positives = 52/106 (49%)
Query: 100 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 159
FL + +++ ++S+ ++ GH +N+ S +V+AS D++++++ V
Sbjct: 93 FLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWSADSKS-IVTASDDKTLKIYEVP 151
Query: 160 TGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
T + + GH N V +F+P + S D +V+IW ++
Sbjct: 152 T---VKMAKTLKGHTNYVFCCNFNPQSSL-VVSGSFDESVRIWDVR 193
Score = 64 (27.6 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 26/88 (29%), Positives = 42/88 (47%)
Query: 250 GDFILSKSVDNEIVLWE-PKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAI 308
G +ILS ++DN + LW+ K K +G + KY + F FS +
Sbjct: 260 GKYILSSNLDNTLKLWDFGKGKTLKQYQGHEN--NKYCI------FANFSVTGGKWIIS- 310
Query: 309 GNREGKIFVWELQSSPPVLIARLSHAQS 336
G+ + KI+VW LQ+ V+ + H Q+
Sbjct: 311 GSEDCKIYVWNLQTKE-VVQSLEGHTQA 337
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 152 (58.6 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 42/115 (36%), Positives = 61/115 (53%)
Query: 93 CNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPS--LVVSASKD 150
C+ DG F+ A + I+V +K S H IN +R P L+VSAS D
Sbjct: 143 CS-DGQSFVTASD-DKTIKVWSTHRQKFLFSLSQH---INWVRCAKFSPDGRLIVSASDD 197
Query: 151 ESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
++V+LW+ + C+ + GG V VDFHPS +A+ GMDNTVK+W ++
Sbjct: 198 KTVKLWDKTSRECVHSYCEHGGF---VTYVDFHPSGTC-VAAAGMDNTVKVWDVR 248
Score = 98 (39.6 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 32/121 (26%), Positives = 56/121 (46%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLW--NV 158
L +G ++ + V + + F GH D++ + P L+ S S+D++VR+W N+
Sbjct: 65 LASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSP-SGHLLASGSRDKTVRIWVPNI 123
Query: 159 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM--KEFWTYVEKSFT 216
+ G + A H V SV F SD + D T+K+WS ++F + +
Sbjct: 124 K-GESTVFRA----HTATVRSVHFC-SDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHIN 177
Query: 217 W 217
W
Sbjct: 178 W 178
Score = 59 (25.8 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 233 VFIASVHSNYVDCNRWLGD--FILSKSVDNEIVLWEPKMKE 271
+F S H N+V C ++ D I+S S D + LW+ +E
Sbjct: 169 LFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRE 209
>UNIPROTKB|Q6GMD2 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GO:GO:0055087 CTD:80349 HOVERGEN:HBG059813 KO:K12602
EMBL:BC074136 RefSeq:NP_001086055.1 UniGene:Xl.23922
ProteinModelPortal:Q6GMD2 GeneID:444484 KEGG:xla:444484
Xenbase:XB-GENE-5751613 Uniprot:Q6GMD2
Length = 305
Score = 150 (57.9 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 49/176 (27%), Positives = 90/176 (51%)
Query: 29 LQEGKRPLYAVVFNFIDSRYFNVFATVGGNRVTVYQCLEGGVIAALQSYVDEDKEESFYT 88
+ G ++V F+ DS++ + VG +V ++ GV + Y + + + +
Sbjct: 102 IDAGPVDAWSVAFS-PDSQHLATGSHVG--KVNIF-----GVETGKKEYSLDTRGK--FI 151
Query: 89 VSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSAS 148
+S A + DG +L +G I+GII + D++ KL + GH I + T L+V+AS
Sbjct: 152 LSIAYSPDG-KYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSL-TFSTDSQLLVTAS 209
Query: 149 KDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
D +++++VQ + A GH + VL+V F P D + ++S D +VK+W +
Sbjct: 210 DDGYIKIYDVQHAS---LAATLSGHGSWVLNVAFSPDDAHFVSSSS-DKSVKVWDV 261
Score = 115 (45.5 bits), Expect = 0.00046, P = 0.00046
Identities = 43/183 (23%), Positives = 84/183 (45%)
Query: 20 KREYRVTNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNRVTVYQCLEGGVIAALQSYVD 79
K+EY + + GK L ++ ++ D +Y A G + ++ G ++ L+ +
Sbjct: 139 KKEYSLDTR---GKFIL-SIAYS-PDGKYLASGAIDG--IINIFDIATGKLLHTLEGHAM 191
Query: 80 EDKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPL 139
+ +F T S LV +G I++ DV + L + GHG + + P
Sbjct: 192 PIRSLTFSTDS--------QLLVTASDDGYIKIYDVQHASLAATLSGHGSWVLNVAFSP- 242
Query: 140 KPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTV 199
+ VS+S D+SV++W+V C+ F H+++V V ++ + +I S G D +
Sbjct: 243 DDAHFVSSSSDKSVKVWDVSARTCVHTFLD---HQDQVWGVKYNRNGS-KIVSVGDDQEI 298
Query: 200 KIW 202
++
Sbjct: 299 HVY 301
Score = 103 (41.3 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 21/82 (25%), Positives = 47/82 (57%)
Query: 83 EESFYTVSWACNV-DGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKP 141
E++ ++V W N DG +++G ++ +++V S+E+L + G + + + P
Sbjct: 16 EDAIWSVGWGKNSNDGSELVISGSLDDLVKVWKWSDERLEMQWALEGHQLGVVSVD-VSP 74
Query: 142 S--LVVSASKDESVRLWNVQTG 161
S ++ S+S D +RLW++++G
Sbjct: 75 SGNIMASSSLDAHIRLWDLESG 96
Score = 51 (23.0 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 20/71 (28%), Positives = 34/71 (47%)
Query: 295 IKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILS 354
I +S D Y A+ G +G I ++++ + +L HA PIR S D +++
Sbjct: 154 IAYSPDGKYLAS--GAIDGIINIFDIATGK-LLHTLEGHAM---PIRSLTFSTDSQLLVT 207
Query: 355 CCEDGAIWRWD 365
+DG I +D
Sbjct: 208 ASDDGYIKIYD 218
>ZFIN|ZDB-GENE-040426-1851 [details] [associations]
symbol:wdr61 "WD repeat domain 61" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0016593 "Cdc73/Paf1 complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0055087 "Ski
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1851 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0032968 GO:GO:0016593 GO:GO:0055087 CTD:80349
HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW EMBL:BC062834
IPI:IPI00484493 RefSeq:NP_957147.1 UniGene:Dr.122500
ProteinModelPortal:Q6P5M2 STRING:Q6P5M2 PRIDE:Q6P5M2 DNASU:393827
GeneID:393827 KEGG:dre:393827 NextBio:20814815 Uniprot:Q6P5M2
Length = 305
Score = 150 (57.9 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 39/117 (33%), Positives = 64/117 (54%)
Query: 87 YTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVS 146
+ +S A + DG +L +G I+GII + D++ KL + GH I + P L+V+
Sbjct: 150 FILSIAYSPDG-KYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP-DSQLLVT 207
Query: 147 ASKDESVRLWNVQTGICILIFAGA-GGHRNEVLSVDFHPSDIYRIASCGMDNTVKIW 202
AS D +++++VQ AG GH + VLSV F P D + ++S D ++K+W
Sbjct: 208 ASDDGYIKIYDVQHAN----LAGTLSGHGSWVLSVAFSPDDTHFVSSSS-DKSIKVW 259
Score = 123 (48.4 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 29/102 (28%), Positives = 54/102 (52%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
LV +G I++ DV + L + GHG + + P + VS+S D+S+++W+ +
Sbjct: 205 LVTASDDGYIKIYDVQHANLAGTLSGHGSWVLSVAFSP-DDTHFVSSSSDKSIKVWDTSS 263
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIW 202
C+ F H+++V SV ++P+ +I S G D + I+
Sbjct: 264 RSCVNTFFD---HQDQVWSVKYNPTGS-KIVSAGDDRAIHIY 301
>POMBASE|SPAC6B12.15 [details] [associations]
symbol:cpc2 "RACK1 ortholog Cpc2" species:4896
"Schizosaccharomyces pombe" [GO:0005080 "protein kinase C binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0031137 "regulation of conjugation with cellular
fusion" evidence=IGI] [GO:0031139 "positive regulation of
conjugation with cellular fusion" evidence=IMP] [GO:0032956
"regulation of actin cytoskeleton organization" evidence=IGI]
[GO:0032995 "regulation of fungal-type cell wall biogenesis"
evidence=IGI] [GO:0034613 "cellular protein localization"
evidence=IMP] [GO:0035556 "intracellular signal transduction"
evidence=IMP] [GO:0043022 "ribosome binding" evidence=IDA]
[GO:2000766 "negative regulation of cytoplasmic translation"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC6B12.15 GO:GO:0005737 EMBL:CU329670
GO:GO:0034613 GO:GO:0016020 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0032995
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0043022 GO:GO:0032956 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM EMBL:L37885 EMBL:AF320333 EMBL:D89247
PIR:T43158 PIR:T43299 RefSeq:NP_593770.1 ProteinModelPortal:Q10281
SMR:Q10281 IntAct:Q10281 MINT:MINT-1203489 STRING:Q10281
PRIDE:Q10281 EnsemblFungi:SPAC6B12.15.1 GeneID:2543298
KEGG:spo:SPAC6B12.15 OrthoDB:EOG437VPP NextBio:20804316
GO:GO:2000766 GO:GO:0031139 Uniprot:Q10281
Length = 314
Score = 135 (52.6 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 32/99 (32%), Positives = 49/99 (49%)
Query: 110 IRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAG 169
IR+ D+ + FVGH + + P VVS S+D+++++WN+ G C
Sbjct: 87 IRLWDLEKGECTHQFVGHTSDVLSVSISPDNRQ-VVSGSRDKTIKIWNI-IGNCKYTITD 144
Query: 170 AGGHRNEVLSVDFHPS-DIYRIASCGMDNTVKIWSMKEF 207
GGH + V V F P+ D S G D VK+W ++ F
Sbjct: 145 -GGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDLETF 182
Score = 118 (46.6 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 28/91 (30%), Positives = 47/91 (51%)
Query: 114 DVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGH 173
DV+ + GH +++ +SAS D+++RLW+++ G C F G H
Sbjct: 49 DVNYGVAQRRLTGHSHFVSDCALS-FDSHYALSASWDKTIRLWDLEKGECTHQFVG---H 104
Query: 174 RNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
++VLSV P D ++ S D T+KIW++
Sbjct: 105 TSDVLSVSISP-DNRQVVSGSRDKTIKIWNI 134
Score = 55 (24.4 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 15/49 (30%), Positives = 21/49 (42%)
Query: 317 VWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWD 365
VW+L++ R SH + +S DGS S DG + WD
Sbjct: 176 VWDLET----FSLRTSHYGHTGYVSAVTISPDGSLCASGGRDGTLMLWD 220
Score = 48 (22.0 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 307 AIGNREGKIFVWELQSSPPV--LIARLS-HAQSKSPIRQTAMSYDGSTI 352
A G R+G + +W+L S + L A+ + +A SP R + GS+I
Sbjct: 208 ASGGRDGTLMLWDLNESTHLYSLEAKANINALVFSPNRYWLCAATGSSI 256
>ZFIN|ZDB-GENE-040808-14 [details] [associations]
symbol:thoc3 "THO complex 3" species:7955 "Danio
rerio" [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040808-14 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 KO:K12880
GeneTree:ENSGT00700000104559 CTD:84321 HOVERGEN:HBG059732
InterPro:IPR011659 Pfam:PF07676 HOGENOM:HOG000264781 OMA:LAYACDD
OrthoDB:EOG49ZXPJ EMBL:BX511257 EMBL:BC079495 EMBL:BC152622
IPI:IPI00485776 RefSeq:NP_001003758.1 UniGene:Dr.78573
STRING:Q6AXK9 Ensembl:ENSDART00000079016 GeneID:445302
KEGG:dre:445302 InParanoid:Q6AXK9 NextBio:20832048 Uniprot:Q6AXK9
Length = 322
Score = 137 (53.3 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 38/131 (29%), Positives = 68/131 (51%)
Query: 87 YTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHK--SFVGHGDSINEIRTQPLKPSLV 144
++V+W+C DG L +G + V + ++L K ++ GHGDS++++ P P L
Sbjct: 30 HSVAWSC--DG-KRLASGSFDKTASVFVLEKDRLVKENNYRGHGDSVDQLCWHPTNPDLF 86
Query: 145 VSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
V+AS D+++R+W+V+T C+ + G E +++ + P D IA D+ V
Sbjct: 87 VTASGDKTIRIWDVRTTKCMATVSTKG----ENINICWSP-DGQTIAVGNKDDVVTFIDA 141
Query: 205 KEFWTYVEKSF 215
K E+ F
Sbjct: 142 KTHRPRAEEQF 152
Score = 53 (23.7 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 16/64 (25%), Positives = 29/64 (45%)
Query: 295 IKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILS 354
IKF Y A G+ + + +W ++ L+ ++ P+R + S+DG + S
Sbjct: 201 IKFDPTGKYFAT--GSADALVSLWNVEE----LVCVRCFSRLDWPVRTLSFSHDGKMLAS 254
Query: 355 CCED 358
ED
Sbjct: 255 ASED 258
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 152 (58.6 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 42/115 (36%), Positives = 61/115 (53%)
Query: 93 CNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPS--LVVSASKD 150
C+ DG F+ A + ++V +K S H IN +R P L+VSAS D
Sbjct: 112 CS-DGQSFVTASD-DKTVKVWSTHRQKFLFSLSQH---INWVRCAKFSPDGRLIVSASDD 166
Query: 151 ESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
++V+LW+ + C+ + GG V VDFHPS IA+ GMDNTVK+W ++
Sbjct: 167 KTVKLWDKTSRECVHSYCEHGGF---VTYVDFHPSGTC-IAAAGMDNTVKVWDVR 217
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 151 (58.2 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 42/115 (36%), Positives = 61/115 (53%)
Query: 93 CNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPS--LVVSASKD 150
C+ DG F+ A + ++V +K S H IN +R P L+VSAS D
Sbjct: 74 CS-DGQSFVTASD-DKTVKVWATHRQKFLFSLSQH---INWVRCAKFSPDGRLIVSASDD 128
Query: 151 ESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
++V+LW+ + C+ + GG V VDFHPS IA+ GMDNTVK+W ++
Sbjct: 129 KTVKLWDKSSRECVHSYCEHGGF---VTYVDFHPSGTC-IAAAGMDNTVKVWDVR 179
Score = 39 (18.8 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 7/29 (24%), Positives = 14/29 (48%)
Query: 250 GDFILSKSVDNEIVLWEPKMKEQSPGEGT 278
G++ S D ++++W+ GE T
Sbjct: 245 GEYFASGGSDEQVMVWKSNFDIVDHGEVT 273
>TAIR|locus:2008159 [details] [associations]
symbol:RACK1B_AT "AT1G48630" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0048364 "root development"
evidence=IGI] [GO:0048367 "shoot system development" evidence=IGI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006417 "regulation of translation" evidence=IGI]
[GO:0009845 "seed germination" evidence=IGI] [GO:0042254 "ribosome
biogenesis" evidence=IGI] [GO:0071215 "cellular response to
abscisic acid stimulus" evidence=IEP] [GO:0001510 "RNA methylation"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0009664 "plant-type cell wall
organization" evidence=RCA] [GO:0042545 "cell wall modification"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006417 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0042254 GO:GO:0048364 GO:GO:0009845 GO:GO:0004871
GO:GO:0071215 GO:GO:0048367 GO:GO:0022626 EMBL:AC073555 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AC074308 EMBL:AY059723 EMBL:AY091352 EMBL:AY087855 EMBL:Z26552
IPI:IPI00531991 RefSeq:NP_175296.1 UniGene:At.17343
ProteinModelPortal:Q9C4Z6 SMR:Q9C4Z6 IntAct:Q9C4Z6 STRING:Q9C4Z6
PaxDb:Q9C4Z6 PRIDE:Q9C4Z6 EnsemblPlants:AT1G48630.1 GeneID:841284
KEGG:ath:AT1G48630 GeneFarm:2979 TAIR:At1g48630 InParanoid:Q9C4Z6
OMA:NCKLRNT PhylomeDB:Q9C4Z6 Genevestigator:Q9C4Z6 Uniprot:Q9C4Z6
Length = 326
Score = 147 (56.8 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 35/111 (31%), Positives = 59/111 (53%)
Query: 96 DGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRL 155
DG F ++G +G +R+ D++ + + FVGH + + +VSAS+D +++L
Sbjct: 74 DG-QFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQ-IVSASRDRTIKL 131
Query: 156 WNVQTGICILIFAGAGGHRNEVLSVDFHPSDIY-RIASCGMDNTVKIWSMK 205
WN G C + A GH+ V V F P+ + I S D TVK+W+++
Sbjct: 132 WNT-LGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQ 181
Score = 41 (19.5 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 346 SYDGSTILSCCEDGAIWRW 364
S DG+T+ S DG I W
Sbjct: 303 SADGNTLFSGYTDGVIRVW 321
>MGI|MGI:1917493 [details] [associations]
symbol:Wdr61 "WD repeat domain 61" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=ISO]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISO] [GO:0035327
"transcriptionally active chromatin" evidence=ISO] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISO] [GO:0055087
"Ski complex" evidence=ISO] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISO] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1917493 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:AF309554 EMBL:AK012342 EMBL:AK013114
EMBL:AK142498 EMBL:AK153862 EMBL:AK167706 EMBL:BC023026
IPI:IPI00112320 RefSeq:NP_001020546.1 RefSeq:NP_075680.1
UniGene:Mm.28437 ProteinModelPortal:Q9ERF3 SMR:Q9ERF3 IntAct:Q9ERF3
PhosphoSite:Q9ERF3 PaxDb:Q9ERF3 PRIDE:Q9ERF3
Ensembl:ENSMUST00000051822 Ensembl:ENSMUST00000121204 GeneID:66317
KEGG:mmu:66317 InParanoid:Q9ERF3 NextBio:321305 Bgee:Q9ERF3
CleanEx:MM_WDR61 Genevestigator:Q9ERF3
GermOnline:ENSMUSG00000061559 Uniprot:Q9ERF3
Length = 305
Score = 149 (57.5 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 47/161 (29%), Positives = 83/161 (51%)
Query: 45 DSRYFNVFATVGGNRVTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAG 104
DS+Y +G +V ++ GV + + Y + + + + +S A + DG +L +G
Sbjct: 117 DSQYLATGTHMG--KVNIF-----GVESGKKEYSLDTRGK--FILSIAYSPDG-KYLASG 166
Query: 105 GINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICI 164
I+GII + D++ KL + GH I + P L+V+AS D +++++VQ
Sbjct: 167 AIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP-DSQLLVTASDDGYIKIYDVQHAN-- 223
Query: 165 LIFAGA-GGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
AG GH + VL+V F P D + ++S D +VK+W +
Sbjct: 224 --LAGTLSGHASWVLNVAFCPDDTHFVSSSS-DKSVKVWDV 261
>TAIR|locus:2092707 [details] [associations]
symbol:RACK1C_AT "AT3G18130" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0048364 "root
development" evidence=IGI] [GO:0048367 "shoot system development"
evidence=IGI] [GO:0009845 "seed germination" evidence=IGI]
[GO:0071215 "cellular response to abscisic acid stimulus"
evidence=IEP] [GO:0005829 "cytosol" evidence=RCA] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048364 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0048367 EMBL:AB020749 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AY050338 EMBL:AY101529 IPI:IPI00545680 RefSeq:NP_188441.1
UniGene:At.22741 ProteinModelPortal:Q9LV28 SMR:Q9LV28 IntAct:Q9LV28
STRING:Q9LV28 PaxDb:Q9LV28 PRIDE:Q9LV28 EnsemblPlants:AT3G18130.1
GeneID:821338 KEGG:ath:AT3G18130 GeneFarm:2980 TAIR:At3g18130
InParanoid:Q9LV28 OMA:NCKLRNS PhylomeDB:Q9LV28
Genevestigator:Q9LV28 Uniprot:Q9LV28
Length = 326
Score = 144 (55.7 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 34/111 (30%), Positives = 58/111 (52%)
Query: 96 DGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRL 155
DG F ++G +G +R+ D++ + + FVGH + + +VSAS+D +++L
Sbjct: 74 DG-QFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQ-IVSASRDRTIKL 131
Query: 156 WNVQTGICILIFAGAGGHRNEVLSVDFHPSDIY-RIASCGMDNTVKIWSMK 205
WN G C + GH+ V V F P+ + I S D TVK+W+++
Sbjct: 132 WNT-LGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQ 181
Score = 44 (20.5 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 27/121 (22%), Positives = 43/121 (35%)
Query: 250 GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIG 309
G S D I+LW+ ++ I+ W C N+ I
Sbjct: 205 GSLCASGGKDGVILLWDLAEGKKLYSLEAGSIIHSLCFSPNRYWL----CAATENSIRIW 260
Query: 310 NREGKIFVWELQ----SSPPVLIARLSHAQSKSPIRQTAMSY--DGSTILSCCEDGAIWR 363
+ E K V +L+ S + K I T++++ DGST+ S DG +
Sbjct: 261 DLESKSVVEDLKVDLKSEAEKNEGGVGTGNQKKVIYCTSLNWSADGSTLFSGYTDGVVRV 320
Query: 364 W 364
W
Sbjct: 321 W 321
>UNIPROTKB|D6RFX4 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9606 "Homo sapiens" [GO:0008200 "ion channel
inhibitor activity" evidence=IEA] [GO:0015935 "small ribosomal
subunit" evidence=IEA] [GO:0017148 "negative regulation of
translation" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0090003
"regulation of establishment of protein localization to plasma
membrane" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0017148 GO:GO:0043025 GO:GO:0030425
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008200
HOGENOM:HOG000091643 ChiTaRS:GNB2L1 HGNC:HGNC:4399 GO:GO:0015935
EMBL:AC008443 IPI:IPI00966041 ProteinModelPortal:D6RFX4 SMR:D6RFX4
Ensembl:ENST00000507000 UCSC:uc010jls.3 ArrayExpress:D6RFX4
Bgee:D6RFX4 Uniprot:D6RFX4
Length = 194
Score = 130 (50.8 bits), Expect = 7.0e-08, Sum P(2) = 7.0e-08
Identities = 33/110 (30%), Positives = 54/110 (49%)
Query: 96 DGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRL 155
DG F ++G +G +R+ D++ + FVGH + + +VS S+D++++L
Sbjct: 33 DG-QFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQ-IVSGSRDKTIKL 90
Query: 156 WNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRI-ASCGMDNTVKIWSM 204
WN G+C H V V F P+ I SCG D VK+W++
Sbjct: 91 WNT-LGVCKYTVQDES-HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL 138
Score = 42 (19.8 bits), Expect = 7.0e-08, Sum P(2) = 7.0e-08
Identities = 13/49 (26%), Positives = 19/49 (38%)
Query: 317 VWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWD 365
VW L + + +H + +S DGS S +DG WD
Sbjct: 135 VWNLANCK----LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWD 179
>TAIR|locus:2016214 [details] [associations]
symbol:AT1G79990 species:3702 "Arabidopsis thaliana"
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0005198 "structural
molecule activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006661 "phosphatidylinositol
biosynthetic process" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0010498 "proteasomal protein
catabolic process" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GO:GO:0005829 GO:GO:0006886
GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR019185
Pfam:PF09801 IPI:IPI00537842 RefSeq:NP_178116.5 UniGene:At.22078
ProteinModelPortal:F4HQE6 SMR:F4HQE6 PRIDE:F4HQE6
EnsemblPlants:AT1G79990.1 GeneID:844339 KEGG:ath:AT1G79990
OMA:EHAVRES Uniprot:F4HQE6
Length = 1135
Score = 157 (60.3 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 37/106 (34%), Positives = 57/106 (53%)
Query: 100 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 159
++VAG + IRV + + K F H D I + P P V+S+S D ++LW+ +
Sbjct: 286 WVVAGADDMFIRVYNYNTMDKIKVFEAHADYIRCVAVHPTLP-YVLSSSDDMLIKLWDWE 344
Query: 160 TG-ICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
G +C IF G H + V+ V F+P D AS +D T+KIW++
Sbjct: 345 KGWLCTQIFEG---HSHYVMQVTFNPKDTNTFASASLDRTIKIWNL 387
>RGD|1308228 [details] [associations]
symbol:Wdr61 "WD repeat domain 61" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=ISO;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISO;ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISO;ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISO;ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISO;ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0055087 "Ski complex" evidence=ISO;ISS]
[GO:0080182 "histone H3-K4 trimethylation" evidence=ISO;ISS]
[GO:2001162 "positive regulation of histone H3-K79 methylation"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1308228 GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0035327 GO:GO:0051571 GO:GO:0032968 GO:GO:0080182
GO:GO:0016593 GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW
EMBL:BC098059 IPI:IPI00366523 RefSeq:NP_001020914.1 UniGene:Rn.3698
ProteinModelPortal:Q4V7A0 STRING:Q4V7A0 PRIDE:Q4V7A0 GeneID:363064
KEGG:rno:363064 UCSC:RGD:1308228 InParanoid:Q4V7A0 NextBio:682300
ArrayExpress:Q4V7A0 Genevestigator:Q4V7A0
GermOnline:ENSRNOG00000012803 Uniprot:Q4V7A0
Length = 305
Score = 148 (57.2 bits), Expect = 8.0e-08, P = 8.0e-08
Identities = 39/119 (32%), Positives = 65/119 (54%)
Query: 87 YTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVS 146
+ +S A + DG +L +G I+GII + D++ KL + GH I + P L+V+
Sbjct: 150 FILSIAYSPDG-KYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP-DSQLLVT 207
Query: 147 ASKDESVRLWNVQTGICILIFAGA-GGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
AS D +++++VQ AG GH + VL+V F P D + ++S D +VK+W +
Sbjct: 208 ASDDGYIKIYDVQHAN----LAGTLSGHASWVLNVAFCPDDTHFVSSSS-DKSVKVWDV 261
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 130 (50.8 bits), Expect = 8.4e-08, Sum P(2) = 8.4e-08
Identities = 36/114 (31%), Positives = 60/114 (52%)
Query: 89 VSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSAS 148
V+W+ + + LV+ + +++ DVS+ K K+ GH + + P + +L+VS S
Sbjct: 67 VAWSSDSN---LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGS 122
Query: 149 KDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIW 202
DESVR+W+V+TG C+ H + V +V F+ D I S D +IW
Sbjct: 123 FDESVRIWDVKTGKCLKTLPA---HSDPVSAVHFN-RDGSLIVSSSYDGLCRIW 172
Score = 128 (50.1 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 30/106 (28%), Positives = 56/106 (52%)
Query: 100 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 159
+L + + +I++ + K K+ GH I+++ +L+VSAS D+++++W+V
Sbjct: 33 WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS-DSNLLVSASDDKTLKIWDVS 91
Query: 160 TGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
+G C+ G H N V +F+P I S D +V+IW +K
Sbjct: 92 SGKCLKTLKG---HSNYVFCCNFNPQSNL-IVSGSFDESVRIWDVK 133
Score = 121 (47.7 bits), Expect = 9.4e-07, Sum P(2) = 9.4e-07
Identities = 32/113 (28%), Positives = 55/113 (48%)
Query: 91 WACNVDGIP-FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASK 149
+ CN + +V+G + +R+ DV K K+ H D ++ + SL+VS+S
Sbjct: 107 FCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR-DGSLIVSSSY 165
Query: 150 DESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIW 202
D R+W+ +G C+ V V F P+ Y +A+ +DNT+K+W
Sbjct: 166 DGLCRIWDTASGQCLKTLID--DDNPPVSFVKFSPNGKYILAAT-LDNTLKLW 215
Score = 58 (25.5 bits), Expect = 8.4e-08, Sum P(2) = 8.4e-08
Identities = 27/104 (25%), Positives = 46/104 (44%)
Query: 250 GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPV-PECDI----WFIKFSCDFHYN 304
G +IL+ ++DN + LW+ K + T +KY + + W + S D N
Sbjct: 200 GKYILAATLDNTLKLWDYS-KGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSED---N 255
Query: 305 AAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYD 348
I N + K V +LQ V+I+ H +++ I A+ D
Sbjct: 256 LVYIWNLQTKEIVQKLQGHTDVVISTACHP-TENIIASAALEND 298
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 151 (58.2 bits), Expect = 8.9e-08, Sum P(2) = 8.9e-08
Identities = 42/115 (36%), Positives = 61/115 (53%)
Query: 93 CNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPS--LVVSASKD 150
C+ DG F+ A + ++V +K S H IN +R P L+VSAS D
Sbjct: 112 CS-DGQSFVTASD-DKTVKVWATHRQKFLFSLSQH---INWVRCAKFSPDGRLIVSASDD 166
Query: 151 ESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
++V+LW+ + C+ + GG V VDFHPS IA+ GMDNTVK+W ++
Sbjct: 167 KTVKLWDKSSRECVHSYCEHGGF---VTYVDFHPSGTC-IAAAGMDNTVKVWDVR 217
Score = 97 (39.2 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 33/121 (27%), Positives = 56/121 (46%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLW--NV 158
L +G ++ + V + + F GH D++ + P L+ S S+D++VR+W NV
Sbjct: 34 LASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSP-SGHLLASGSRDKTVRIWVPNV 92
Query: 159 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM--KEFWTYVEKSFT 216
+ G + A H V SV F SD + D TVK+W+ ++F + +
Sbjct: 93 K-GESTVFRA----HTATVRSVHFC-SDGQSFVTASDDKTVKVWATHRQKFLFSLSQHIN 146
Query: 217 W 217
W
Sbjct: 147 W 147
Score = 60 (26.2 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 233 VFIASVHSNYVDCNRWLGD--FILSKSVDNEIVLWEPKMKE 271
+F S H N+V C ++ D I+S S D + LW+ +E
Sbjct: 138 LFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRE 178
Score = 39 (18.8 bits), Expect = 8.9e-08, Sum P(2) = 8.9e-08
Identities = 7/29 (24%), Positives = 14/29 (48%)
Query: 250 GDFILSKSVDNEIVLWEPKMKEQSPGEGT 278
G++ S D ++++W+ GE T
Sbjct: 283 GEYFASGGSDEQVMVWKSNFDIVDHGEVT 311
>POMBASE|SPAC630.14c [details] [associations]
symbol:tup12 "transcriptional corepressor Tup12"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043156 "chromatin remodeling in response to cation stress"
evidence=IMP] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] [GO:0071473 "cellular response to cation stress"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC630.14c InterPro:IPR001632 GO:GO:0005829
GO:GO:0003714 GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 PRINTS:PR00319 HOGENOM:HOG000200558
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:U92792 PIR:T38992 RefSeq:NP_592910.2 ProteinModelPortal:Q9UUG8
STRING:Q9UUG8 EnsemblFungi:SPAC630.14c.1 GeneID:2543402
NextBio:20804417 GO:GO:0043156 Uniprot:Q9UUG8
Length = 598
Score = 131 (51.2 bits), Expect = 9.4e-08, Sum P(2) = 9.4e-08
Identities = 43/152 (28%), Positives = 70/152 (46%)
Query: 52 FATVGGNRVTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIR 111
F G NR + +E G + L +E Y S A + DG +L G + IR
Sbjct: 313 FLATGCNRAAMVFNVETGKLITLLQEESSKREGDLYVRSVAFSPDG-KYLATGVEDQQIR 371
Query: 112 VIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAG 171
+ D++ +++++ GH I + +LV S S D +V LW+V+ G LI
Sbjct: 372 IWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLV-SGSGDRTVCLWDVEAGEQKLILHTDD 430
Query: 172 GHRNEVLSVDFHPSDIYRIASCGMDNTVKIWS 203
G V +V F P + IA+ +D ++IW+
Sbjct: 431 G----VTTVMFSPDGQF-IAAGSLDKVIRIWT 457
Score = 66 (28.3 bits), Expect = 9.4e-08, Sum P(2) = 9.4e-08
Identities = 32/123 (26%), Positives = 53/123 (43%)
Query: 250 GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIG 309
G FI + S+D I +W GT ++++ E ++ + FS D Y + G
Sbjct: 441 GQFIAAGSLDKVIRIWT--------SSGT--LVEQLHGHEESVYSVAFSPDGKYLVS--G 488
Query: 310 NREGKIFVWELQS----SPPVL----IARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAI 361
+ + I +WELQ +P + I + + K I +S DG I+S +D I
Sbjct: 489 SLDNTIKLWELQCVSNVAPSMYKEGGICKQTFTGHKDFILSVTVSPDGKWIISGSKDRTI 548
Query: 362 WRW 364
W
Sbjct: 549 QFW 551
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 135 (52.6 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 35/123 (28%), Positives = 62/123 (50%)
Query: 80 EDKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPL 139
E +E ++W+ + + + I++ DV + K+ K+ GH + + + P
Sbjct: 85 EGHKEGISDIAWS---QDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNP- 140
Query: 140 KPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTV 199
+ +L+VS S DE+VR+W+V TG C + + H + V V F+ D + S D TV
Sbjct: 141 QSNLIVSGSFDENVRIWDVNTGECTKMISA---HSDPVTGVHFN-RDGTLVVSGSYDGTV 196
Query: 200 KIW 202
+IW
Sbjct: 197 RIW 199
Score = 122 (48.0 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 31/103 (30%), Positives = 53/103 (51%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
+V+G + +R+ DV+ + K H D + + +LVVS S D +VR+W+ T
Sbjct: 145 IVSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNR-DGTLVVSGSYDGTVRIWDTTT 203
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWS 203
G + + G EV V F P+ + +A +DNT+++WS
Sbjct: 204 GQLLNTISTEDG--KEVSFVKFSPNGKFVLAGT-LDNTLRLWS 243
Score = 120 (47.3 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 31/110 (28%), Positives = 57/110 (51%)
Query: 96 DGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIR-TQPLKPSLVVSASKDESVR 154
DG +L + + I++ + K ++ GH + I++I +Q K L+ SAS D++++
Sbjct: 57 DG-KWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAWSQDSK--LICSASDDKTIK 113
Query: 155 LWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
+W+V++G + G H+ V V F+P I S D V+IW +
Sbjct: 114 IWDVESGKMVKTLKG---HKEYVFGVSFNPQSNL-IVSGSFDENVRIWDV 159
Score = 53 (23.7 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 24/114 (21%), Positives = 44/114 (38%)
Query: 250 GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPEC-DIWFIKFSCDFHYNAAAI 308
G ++S S D + +W+ T +L + ++ F+KFS + + A
Sbjct: 184 GTLVVSGSYDGTVRIWDTT---------TGQLLNTISTEDGKEVSFVKFSPNGKFVLA-- 232
Query: 309 GNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIW 362
G + + +W ++ L H K I T G I++ ED I+
Sbjct: 233 GTLDNTLRLWSYNNNKKCLKTYTGHKNEKYCIFSTFSVTCGKWIVTGSEDNLIY 286
Score = 51 (23.0 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 25/106 (23%), Positives = 43/106 (40%)
Query: 250 GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPV-----PECDIWFIKFSCDFHYN 304
G F+L+ ++DN + LW ++ T +KY + C W + S D N
Sbjct: 227 GKFVLAGTLDNTLRLWSYNNNKKCLKTYTGHKNEKYCIFSTFSVTCGKWIVTGSED---N 283
Query: 305 AAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGS 350
I N + + V L V++ H +++ I A+ D S
Sbjct: 284 LIYIYNLQTREIVQTLAGHEDVVLTVACHP-TENIIASGALEKDRS 328
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 130 (50.8 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 36/114 (31%), Positives = 60/114 (52%)
Query: 89 VSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSAS 148
V+W+ + + LV+ + +++ DVS+ K K+ GH + + P + +L+VS S
Sbjct: 93 VAWSSDSN---LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGS 148
Query: 149 KDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIW 202
DESVR+W+V+TG C+ H + V +V F+ D I S D +IW
Sbjct: 149 FDESVRIWDVKTGKCLKTLPA---HSDPVSAVHFN-RDGSLIVSSSYDGLCRIW 198
Score = 128 (50.1 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 30/106 (28%), Positives = 56/106 (52%)
Query: 100 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 159
+L + + +I++ + K K+ GH I+++ +L+VSAS D+++++W+V
Sbjct: 59 WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS-DSNLLVSASDDKTLKIWDVS 117
Query: 160 TGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
+G C+ G H N V +F+P I S D +V+IW +K
Sbjct: 118 SGKCLKTLKG---HSNYVFCCNFNPQSNL-IVSGSFDESVRIWDVK 159
Score = 121 (47.7 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 32/113 (28%), Positives = 55/113 (48%)
Query: 91 WACNVDGIP-FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASK 149
+ CN + +V+G + +R+ DV K K+ H D ++ + SL+VS+S
Sbjct: 133 FCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR-DGSLIVSSSY 191
Query: 150 DESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIW 202
D R+W+ +G C+ V V F P+ Y +A+ +DNT+K+W
Sbjct: 192 DGLCRIWDTASGQCLKTLID--DDNPPVSFVKFSPNGKYILAAT-LDNTLKLW 241
Score = 58 (25.5 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 27/104 (25%), Positives = 46/104 (44%)
Query: 250 GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPV-PECDI----WFIKFSCDFHYN 304
G +IL+ ++DN + LW+ K + T +KY + + W + S D N
Sbjct: 226 GKYILAATLDNTLKLWDYS-KGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSED---N 281
Query: 305 AAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYD 348
I N + K V +LQ V+I+ H +++ I A+ D
Sbjct: 282 LVYIWNLQTKEIVQKLQGHTDVVISTACHP-TENIIASAALEND 324
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 130 (50.8 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 36/114 (31%), Positives = 60/114 (52%)
Query: 89 VSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSAS 148
V+W+ + + LV+ + +++ DVS+ K K+ GH + + P + +L+VS S
Sbjct: 93 VAWSSDSN---LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGS 148
Query: 149 KDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIW 202
DESVR+W+V+TG C+ H + V +V F+ D I S D +IW
Sbjct: 149 FDESVRIWDVKTGKCLKTLPA---HSDPVSAVHFN-RDGSLIVSSSYDGLCRIW 198
Score = 128 (50.1 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 30/106 (28%), Positives = 56/106 (52%)
Query: 100 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 159
+L + + +I++ + K K+ GH I+++ +L+VSAS D+++++W+V
Sbjct: 59 WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS-DSNLLVSASDDKTLKIWDVS 117
Query: 160 TGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
+G C+ G H N V +F+P I S D +V+IW +K
Sbjct: 118 SGKCLKTLKG---HSNYVFCCNFNPQSNL-IVSGSFDESVRIWDVK 159
Score = 121 (47.7 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 32/113 (28%), Positives = 55/113 (48%)
Query: 91 WACNVDGIP-FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASK 149
+ CN + +V+G + +R+ DV K K+ H D ++ + SL+VS+S
Sbjct: 133 FCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR-DGSLIVSSSY 191
Query: 150 DESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIW 202
D R+W+ +G C+ V V F P+ Y +A+ +DNT+K+W
Sbjct: 192 DGLCRIWDTASGQCLKTLID--DDNPPVSFVKFSPNGKYILAAT-LDNTLKLW 241
Score = 58 (25.5 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 27/104 (25%), Positives = 46/104 (44%)
Query: 250 GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPV-PECDI----WFIKFSCDFHYN 304
G +IL+ ++DN + LW+ K + T +KY + + W + S D N
Sbjct: 226 GKYILAATLDNTLKLWDYS-KGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSED---N 281
Query: 305 AAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYD 348
I N + K V +LQ V+I+ H +++ I A+ D
Sbjct: 282 LVYIWNLQTKEIVQKLQGHTDVVISTACHP-TENIIASAALEND 324
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 130 (50.8 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 36/114 (31%), Positives = 60/114 (52%)
Query: 89 VSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSAS 148
V+W+ + + LV+ + +++ DVS+ K K+ GH + + P + +L+VS S
Sbjct: 93 VAWSSDSN---LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGS 148
Query: 149 KDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIW 202
DESVR+W+V+TG C+ H + V +V F+ D I S D +IW
Sbjct: 149 FDESVRIWDVKTGKCLKTLPA---HSDPVSAVHFN-RDGSLIVSSSYDGLCRIW 198
Score = 128 (50.1 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 30/106 (28%), Positives = 56/106 (52%)
Query: 100 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 159
+L + + +I++ + K K+ GH I+++ +L+VSAS D+++++W+V
Sbjct: 59 WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS-DSNLLVSASDDKTLKIWDVS 117
Query: 160 TGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
+G C+ G H N V +F+P I S D +V+IW +K
Sbjct: 118 SGKCLKTLKG---HSNYVFCCNFNPQSNL-IVSGSFDESVRIWDVK 159
Score = 121 (47.7 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 32/113 (28%), Positives = 55/113 (48%)
Query: 91 WACNVDGIP-FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASK 149
+ CN + +V+G + +R+ DV K K+ H D ++ + SL+VS+S
Sbjct: 133 FCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR-DGSLIVSSSY 191
Query: 150 DESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIW 202
D R+W+ +G C+ V V F P+ Y +A+ +DNT+K+W
Sbjct: 192 DGLCRIWDTASGQCLKTLID--DDNPPVSFVKFSPNGKYILAAT-LDNTLKLW 241
Score = 58 (25.5 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 27/104 (25%), Positives = 46/104 (44%)
Query: 250 GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPV-PECDI----WFIKFSCDFHYN 304
G +IL+ ++DN + LW+ K + T +KY + + W + S D N
Sbjct: 226 GKYILAATLDNTLKLWDYS-KGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSED---N 281
Query: 305 AAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYD 348
I N + K V +LQ V+I+ H +++ I A+ D
Sbjct: 282 LVYIWNLQTKEIVQKLQGHTDVVISTACHP-TENIIASAALEND 324
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 130 (50.8 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 36/114 (31%), Positives = 60/114 (52%)
Query: 89 VSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSAS 148
V+W+ + + LV+ + +++ DVS+ K K+ GH + + P + +L+VS S
Sbjct: 93 VAWSSDSN---LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGS 148
Query: 149 KDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIW 202
DESVR+W+V+TG C+ H + V +V F+ D I S D +IW
Sbjct: 149 FDESVRIWDVKTGKCLKTLPA---HSDPVSAVHFN-RDGSLIVSSSYDGLCRIW 198
Score = 128 (50.1 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 30/106 (28%), Positives = 56/106 (52%)
Query: 100 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 159
+L + + +I++ + K K+ GH I+++ +L+VSAS D+++++W+V
Sbjct: 59 WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS-DSNLLVSASDDKTLKIWDVS 117
Query: 160 TGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
+G C+ G H N V +F+P I S D +V+IW +K
Sbjct: 118 SGKCLKTLKG---HSNYVFCCNFNPQSNL-IVSGSFDESVRIWDVK 159
Score = 121 (47.7 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 32/113 (28%), Positives = 55/113 (48%)
Query: 91 WACNVDGIP-FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASK 149
+ CN + +V+G + +R+ DV K K+ H D ++ + SL+VS+S
Sbjct: 133 FCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR-DGSLIVSSSY 191
Query: 150 DESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIW 202
D R+W+ +G C+ V V F P+ Y +A+ +DNT+K+W
Sbjct: 192 DGLCRIWDTASGQCLKTLID--DDNPPVSFVKFSPNGKYILAAT-LDNTLKLW 241
Score = 58 (25.5 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 27/104 (25%), Positives = 46/104 (44%)
Query: 250 GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPV-PECDI----WFIKFSCDFHYN 304
G +IL+ ++DN + LW+ K + T +KY + + W + S D N
Sbjct: 226 GKYILAATLDNTLKLWDYS-KGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSED---N 281
Query: 305 AAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYD 348
I N + K V +LQ V+I+ H +++ I A+ D
Sbjct: 282 LVYIWNLQTKEIVQKLQGHTDVVISTACHP-TENIIASAALEND 324
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 130 (50.8 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 36/114 (31%), Positives = 60/114 (52%)
Query: 89 VSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSAS 148
V+W+ + + LV+ + +++ DVS+ K K+ GH + + P + +L+VS S
Sbjct: 93 VAWSSDSN---LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGS 148
Query: 149 KDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIW 202
DESVR+W+V+TG C+ H + V +V F+ D I S D +IW
Sbjct: 149 FDESVRIWDVKTGKCLKTLPA---HSDPVSAVHFN-RDGSLIVSSSYDGLCRIW 198
Score = 128 (50.1 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 30/106 (28%), Positives = 56/106 (52%)
Query: 100 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 159
+L + + +I++ + K K+ GH I+++ +L+VSAS D+++++W+V
Sbjct: 59 WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS-DSNLLVSASDDKTLKIWDVS 117
Query: 160 TGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
+G C+ G H N V +F+P I S D +V+IW +K
Sbjct: 118 SGKCLKTLKG---HSNYVFCCNFNPQSNL-IVSGSFDESVRIWDVK 159
Score = 121 (47.7 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 32/113 (28%), Positives = 55/113 (48%)
Query: 91 WACNVDGIP-FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASK 149
+ CN + +V+G + +R+ DV K K+ H D ++ + SL+VS+S
Sbjct: 133 FCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR-DGSLIVSSSY 191
Query: 150 DESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIW 202
D R+W+ +G C+ V V F P+ Y +A+ +DNT+K+W
Sbjct: 192 DGLCRIWDTASGQCLKTLID--DDNPPVSFVKFSPNGKYILAAT-LDNTLKLW 241
Score = 58 (25.5 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 27/104 (25%), Positives = 46/104 (44%)
Query: 250 GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPV-PECDI----WFIKFSCDFHYN 304
G +IL+ ++DN + LW+ K + T +KY + + W + S D N
Sbjct: 226 GKYILAATLDNTLKLWDYS-KGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSED---N 281
Query: 305 AAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYD 348
I N + K V +LQ V+I+ H +++ I A+ D
Sbjct: 282 LVYIWNLQTKEIVQKLQGHTDVVISTACHP-TENIIASAALEND 324
>UNIPROTKB|Q29RH4 [details] [associations]
symbol:THOC3 "THO complex subunit 3" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 KO:K12880 GO:GO:0003723 GO:GO:0051028 EMBL:BC114172
IPI:IPI00732803 RefSeq:NP_001039765.1 UniGene:Bt.3953
ProteinModelPortal:Q29RH4 GeneID:529231 KEGG:bta:529231 CTD:84321
HOVERGEN:HBG059732 NextBio:20874992 InterPro:IPR011659 Pfam:PF07676
Uniprot:Q29RH4
Length = 351
Score = 136 (52.9 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 39/131 (29%), Positives = 68/131 (51%)
Query: 87 YTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHK--SFVGHGDSINEIRTQPLKPSLV 144
++V+W+C DG L +G + V + ++L K ++ GHGDS++++ P P L
Sbjct: 59 HSVAWSC--DGRR-LASGSFDKTASVFLLEKDRLVKENNYRGHGDSVDQLCWHPSNPDLF 115
Query: 145 VSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
V+AS D+++R+W+V+T CI G E +++ + P D IA D+ V
Sbjct: 116 VTASGDKTIRIWDVRTTKCIATVNTKG----ENINICWSP-DGQTIAVGNKDDVVTFIDA 170
Query: 205 KEFWTYVEKSF 215
K + E+ F
Sbjct: 171 KTHRSKAEEQF 181
Score = 52 (23.4 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 12/52 (23%), Positives = 25/52 (48%)
Query: 307 AIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCED 358
A G+ + + +W++ L+ ++ P+R + S+DG + S ED
Sbjct: 240 ATGSADALVSLWDVDE----LVCVRCFSRLDWPVRTLSFSHDGKMLASASED 287
>UNIPROTKB|E2RC43 [details] [associations]
symbol:THOC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046784 "intronless viral mRNA export from
host nucleus" evidence=IEA] [GO:0000346 "transcription export
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 KO:K12880 GO:GO:0000346 GO:GO:0046784
GeneTree:ENSGT00700000104559 CTD:84321 InterPro:IPR011659
Pfam:PF07676 OMA:LAYACDD EMBL:AAEX03002980 RefSeq:XP_537899.2
ProteinModelPortal:E2RC43 Ensembl:ENSCAFT00000022750 GeneID:480781
KEGG:cfa:480781 NextBio:20855728 Uniprot:E2RC43
Length = 351
Score = 136 (52.9 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 39/131 (29%), Positives = 68/131 (51%)
Query: 87 YTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHK--SFVGHGDSINEIRTQPLKPSLV 144
++V+W+C DG L +G + V + ++L K ++ GHGDS++++ P P L
Sbjct: 59 HSVAWSC--DGRR-LASGSFDKTASVFLLEKDRLVKENNYRGHGDSVDQLCWHPSNPDLF 115
Query: 145 VSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
V+AS D+++R+W+V+T CI G E +++ + P D IA D+ V
Sbjct: 116 VTASGDKTIRIWDVRTTKCIATVNTKG----ENINICWSP-DGQTIAVGNKDDVVTFIDA 170
Query: 205 KEFWTYVEKSF 215
K + E+ F
Sbjct: 171 KTHRSKAEEQF 181
Score = 52 (23.4 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 12/52 (23%), Positives = 25/52 (48%)
Query: 307 AIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCED 358
A G+ + + +W++ L+ ++ P+R + S+DG + S ED
Sbjct: 240 ATGSADALVSLWDVDE----LVCVRCFSRLDWPVRTLSFSHDGKMLASASED 287
>UNIPROTKB|Q96J01 [details] [associations]
symbol:THOC3 "THO complex subunit 3" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0006406 "mRNA export from nucleus" evidence=IDA] [GO:0000346
"transcription export complex" evidence=IDA] [GO:0046784
"intronless viral mRNA export from host nucleus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
KO:K12880 GO:GO:0003723 GO:GO:0000346 GO:GO:0046784 CTD:84321
HOVERGEN:HBG059732 InterPro:IPR011659 Pfam:PF07676 EMBL:AC138965
EMBL:BC006849 EMBL:BC068499 IPI:IPI00063729 RefSeq:NP_115737.1
UniGene:Hs.484227 UniGene:Hs.715943 ProteinModelPortal:Q96J01
SMR:Q96J01 IntAct:Q96J01 STRING:Q96J01 PhosphoSite:Q96J01
DMDM:48474597 PaxDb:Q96J01 PRIDE:Q96J01 DNASU:84321
Ensembl:ENST00000265097 GeneID:84321 KEGG:hsa:84321 UCSC:uc003mdg.4
GeneCards:GC05M175344 HGNC:HGNC:19072 HPA:HPA042764 HPA:HPA044009
HPA:HPA045071 MIM:606929 neXtProt:NX_Q96J01 PharmGKB:PA134893535
HOGENOM:HOG000264781 InParanoid:Q96J01 OMA:LAYACDD
OrthoDB:EOG49ZXPJ PhylomeDB:Q96J01 ChiTaRS:THOC3 GenomeRNAi:84321
NextBio:74048 ArrayExpress:Q96J01 Bgee:Q96J01 CleanEx:HS_THOC3
Genevestigator:Q96J01 GermOnline:ENSG00000051596 Uniprot:Q96J01
Length = 351
Score = 136 (52.9 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 39/131 (29%), Positives = 68/131 (51%)
Query: 87 YTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHK--SFVGHGDSINEIRTQPLKPSLV 144
++V+W+C DG L +G + V + ++L K ++ GHGDS++++ P P L
Sbjct: 59 HSVAWSC--DGRR-LASGSFDKTASVFLLEKDRLVKENNYRGHGDSVDQLCWHPSNPDLF 115
Query: 145 VSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
V+AS D+++R+W+V+T CI G E +++ + P D IA D+ V
Sbjct: 116 VTASGDKTIRIWDVRTTKCIATVNTKG----ENINICWSP-DGQTIAVGNKDDVVTFIDA 170
Query: 205 KEFWTYVEKSF 215
K + E+ F
Sbjct: 171 KTHRSKAEEQF 181
Score = 52 (23.4 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 12/52 (23%), Positives = 25/52 (48%)
Query: 307 AIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCED 358
A G+ + + +W++ L+ ++ P+R + S+DG + S ED
Sbjct: 240 ATGSADALVSLWDVDE----LVCVRCFSRLDWPVRTLSFSHDGKMLASASED 287
>UNIPROTKB|F1S386 [details] [associations]
symbol:THOC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046784 "intronless viral mRNA export from host
nucleus" evidence=IEA] [GO:0000346 "transcription export complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 KO:K12880 GO:GO:0000346 GO:GO:0046784
GeneTree:ENSGT00700000104559 InterPro:IPR011659 Pfam:PF07676
OMA:LAYACDD EMBL:CU993810 RefSeq:XP_003123712.1
Ensembl:ENSSSCT00000015360 GeneID:100524425 KEGG:ssc:100524425
Uniprot:F1S386
Length = 351
Score = 136 (52.9 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 39/131 (29%), Positives = 68/131 (51%)
Query: 87 YTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHK--SFVGHGDSINEIRTQPLKPSLV 144
++V+W+C DG L +G + V + ++L K ++ GHGDS++++ P P L
Sbjct: 59 HSVAWSC--DGRR-LASGSFDKTASVFLLEKDRLVKENNYRGHGDSVDQLCWHPSNPDLF 115
Query: 145 VSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
V+AS D+++R+W+V+T CI G E +++ + P D IA D+ V
Sbjct: 116 VTASGDKTIRIWDVRTTKCIATVNTKG----ENINICWSP-DGQTIAVGNKDDVVTFIDA 170
Query: 205 KEFWTYVEKSF 215
K + E+ F
Sbjct: 171 KTHRSKAEEQF 181
Score = 52 (23.4 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 12/52 (23%), Positives = 25/52 (48%)
Query: 307 AIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCED 358
A G+ + + +W++ L+ ++ P+R + S+DG + S ED
Sbjct: 240 ATGSADALVSLWDVDE----LVCVRCFSRLDWPVRTLSFSHDGKMLASASED 287
>MGI|MGI:1920916 [details] [associations]
symbol:Thoc3 "THO complex 3" species:10090 "Mus musculus"
[GO:0000346 "transcription export complex" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006406 "mRNA
export from nucleus" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0046784
"intronless viral mRNA export from host nucleus" evidence=ISO]
[GO:0051028 "mRNA transport" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1920916 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 KO:K12880
GO:GO:0003723 GO:GO:0000346 GO:GO:0046784
GeneTree:ENSGT00700000104559 CTD:84321 HOVERGEN:HBG059732
InterPro:IPR011659 Pfam:PF07676 HOGENOM:HOG000264781 OMA:LAYACDD
OrthoDB:EOG49ZXPJ EMBL:AK010668 EMBL:BC019603 IPI:IPI00311904
RefSeq:NP_082873.2 UniGene:Mm.292487 ProteinModelPortal:Q8VE80
SMR:Q8VE80 PhosphoSite:Q8VE80 PaxDb:Q8VE80 PRIDE:Q8VE80
Ensembl:ENSMUST00000026990 GeneID:73666 KEGG:mmu:73666
UCSC:uc007qod.2 InParanoid:Q8VE80 NextBio:338741 Bgee:Q8VE80
CleanEx:MM_THOC3 Genevestigator:Q8VE80
GermOnline:ENSMUSG00000025872 Uniprot:Q8VE80
Length = 351
Score = 136 (52.9 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 39/131 (29%), Positives = 68/131 (51%)
Query: 87 YTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHK--SFVGHGDSINEIRTQPLKPSLV 144
++V+W+C DG L +G + V + ++L K ++ GHGDS++++ P P L
Sbjct: 59 HSVAWSC--DGRR-LASGSFDKTASVFLLEKDRLVKENNYRGHGDSVDQLCWHPSNPDLF 115
Query: 145 VSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
V+AS D+++R+W+V+T CI G E +++ + P D IA D+ V
Sbjct: 116 VTASGDKTIRIWDVRTTKCIATVNTKG----ENINICWSP-DGQTIAVGNKDDVVTFIDA 170
Query: 205 KEFWTYVEKSF 215
K + E+ F
Sbjct: 171 KTHRSKAEEQF 181
Score = 52 (23.4 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 12/52 (23%), Positives = 25/52 (48%)
Query: 307 AIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCED 358
A G+ + + +W++ L+ ++ P+R + S+DG + S ED
Sbjct: 240 ATGSADALVSLWDVDE----LVCVRCFSRLDWPVRTLSFSHDGKMLASASED 287
>RGD|1311669 [details] [associations]
symbol:Thoc3 "THO complex 3" species:10116 "Rattus norvegicus"
[GO:0000346 "transcription export complex" evidence=IEA;ISO]
[GO:0006406 "mRNA export from nucleus" evidence=ISO] [GO:0046784
"intronless viral mRNA export from host nucleus" evidence=IEA;ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311669 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 KO:K12880 EMBL:CH474032
GeneTree:ENSGT00700000104559 CTD:84321 HOVERGEN:HBG059732
InterPro:IPR011659 Pfam:PF07676 HOGENOM:HOG000264781 OMA:LAYACDD
OrthoDB:EOG49ZXPJ EMBL:BC168852 IPI:IPI00364620
RefSeq:NP_001099529.1 UniGene:Rn.101956 STRING:B5DEY5
Ensembl:ENSRNOT00000000116 GeneID:290519 KEGG:rno:290519
UCSC:RGD:1311669 NextBio:631152 Genevestigator:B5DEY5
Uniprot:B5DEY5
Length = 351
Score = 136 (52.9 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 39/131 (29%), Positives = 68/131 (51%)
Query: 87 YTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHK--SFVGHGDSINEIRTQPLKPSLV 144
++V+W+C DG L +G + V + ++L K ++ GHGDS++++ P P L
Sbjct: 59 HSVAWSC--DGRR-LASGSFDKTASVFLLEKDRLVKENNYRGHGDSVDQLCWHPSNPDLF 115
Query: 145 VSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
V+AS D+++R+W+V+T CI G E +++ + P D IA D+ V
Sbjct: 116 VTASGDKTIRIWDVRTTKCIATVNTKG----ENINICWSP-DGQTIAVGNKDDVVTFIDA 170
Query: 205 KEFWTYVEKSF 215
K + E+ F
Sbjct: 171 KTHRSKAEEQF 181
Score = 52 (23.4 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 12/52 (23%), Positives = 25/52 (48%)
Query: 307 AIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCED 358
A G+ + + +W++ L+ ++ P+R + S+DG + S ED
Sbjct: 240 ATGSADALVSLWDVDE----LVCVRCFSRLDWPVRTLSFSHDGKMLASASED 287
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 147 (56.8 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 41/115 (35%), Positives = 59/115 (51%)
Query: 93 CNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPS--LVVSASKD 150
C+ DG LV + ++V ++ S H IN +R P L+VSAS D
Sbjct: 112 CS-DG-QLLVTASDDKTVKVWSTHRQRFLFSLTQH---INWVRCAKFSPDGRLIVSASDD 166
Query: 151 ESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
++V+LW+ + C+ + GG V VDFHPS IA+ GMDNTVK+W +
Sbjct: 167 KTVKLWDKTSRECVHSYCEHGGF---VTYVDFHPSGTC-IAAAGMDNTVKVWDTR 217
Score = 98 (39.6 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 31/105 (29%), Positives = 51/105 (48%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLW--NV 158
L +G ++ + + + + F GH D++ + P L+ S S+D++VR+W NV
Sbjct: 34 LASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSP-SGHLLASGSRDKTVRIWVPNV 92
Query: 159 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWS 203
+ G + A H V SV F SD + + D TVK+WS
Sbjct: 93 K-GESTVFRA----HTATVRSVHFC-SDGQLLVTASDDKTVKVWS 131
Score = 56 (24.8 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 233 VFIASVHSNYVDCNRWLGD--FILSKSVDNEIVLWEPKMKE 271
+F + H N+V C ++ D I+S S D + LW+ +E
Sbjct: 138 LFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRE 178
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 136 (52.9 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 34/102 (33%), Positives = 56/102 (54%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
+V+ + +++ ++ ++ K+ GH + + P + SLVVS S DESVR+W+V+T
Sbjct: 144 VVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNP-QSSLVVSGSFDESVRIWDVKT 202
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIW 202
G+CI H + V +V F+ D IAS D V+IW
Sbjct: 203 GMCIKTLPA---HSDPVSAVSFN-RDGSLIASGSYDGLVRIW 240
Score = 118 (46.6 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 33/117 (28%), Positives = 53/117 (45%)
Query: 91 WACNVDGIPFLV-AGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASK 149
+ CN + LV +G + +R+ DV K+ H D ++ + SL+ S S
Sbjct: 175 FCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNR-DGSLIASGSY 233
Query: 150 DESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKE 206
D VR+W+ G CI V V F P+ Y +AS +D+T+K+W +
Sbjct: 234 DGLVRIWDTANGQCIKTLVD--DENPPVAFVKFSPNGKYILAS-NLDSTLKLWDFSK 287
Score = 53 (23.7 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 19/73 (26%), Positives = 36/73 (49%)
Query: 250 GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIG 309
G +IL+ ++D+ + LW+ K ++ + T KY + F FS + G
Sbjct: 268 GKYILASNLDSTLKLWDFS-KGKTLKQYTGHENSKYCI------FANFSVTGGKWIIS-G 319
Query: 310 NREGKIFVWELQS 322
+ + KI++W LQ+
Sbjct: 320 SEDCKIYIWNLQT 332
Score = 40 (19.1 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 250 GDFILSKSVDNEIVLWEPKMKE 271
G +I+S S D +I +W + +E
Sbjct: 313 GKWIISGSEDCKIYIWNLQTRE 334
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 136 (52.9 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 34/102 (33%), Positives = 56/102 (54%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
+V+ + +++ ++ ++ K+ GH + + P + SLVVS S DESVR+W+V+T
Sbjct: 144 VVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNP-QSSLVVSGSFDESVRIWDVKT 202
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIW 202
G+CI H + V +V F+ D IAS D V+IW
Sbjct: 203 GMCIKTLPA---HSDPVSAVSFN-RDGSLIASGSYDGLVRIW 240
Score = 118 (46.6 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 33/117 (28%), Positives = 53/117 (45%)
Query: 91 WACNVDGIPFLV-AGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASK 149
+ CN + LV +G + +R+ DV K+ H D ++ + SL+ S S
Sbjct: 175 FCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNR-DGSLIASGSY 233
Query: 150 DESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKE 206
D VR+W+ G CI V V F P+ Y +AS +D+T+K+W +
Sbjct: 234 DGLVRIWDTANGQCIKTLVD--DENPPVAFVKFSPNGKYILAS-NLDSTLKLWDFSK 287
Score = 53 (23.7 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 19/73 (26%), Positives = 36/73 (49%)
Query: 250 GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIG 309
G +IL+ ++D+ + LW+ K ++ + T KY + F FS + G
Sbjct: 268 GKYILASNLDSTLKLWDFS-KGKTLKQYTGHENSKYCI------FANFSVTGGKWIIS-G 319
Query: 310 NREGKIFVWELQS 322
+ + KI++W LQ+
Sbjct: 320 SEDCKIYIWNLQT 332
Score = 40 (19.1 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 250 GDFILSKSVDNEIVLWEPKMKE 271
G +I+S S D +I +W + +E
Sbjct: 313 GKWIISGSEDCKIYIWNLQTRE 334
>POMBASE|SPAC18B11.10 [details] [associations]
symbol:tup11 "transcriptional corepressor Tup11"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=IEP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC18B11.10 GO:GO:0005829 GO:GO:0003714
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0033554 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 EMBL:AB027768 PIR:S58306
RefSeq:NP_592873.1 ProteinModelPortal:Q09715 STRING:Q09715
EnsemblFungi:SPAC18B11.10.1 GeneID:2542299 KEGG:spo:SPAC18B11.10
HOGENOM:HOG000200558 KO:K06666 OMA:KPRENEN OrthoDB:EOG4KM2C2
NextBio:20803361 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
Uniprot:Q09715
Length = 614
Score = 143 (55.4 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 52/197 (26%), Positives = 86/197 (43%)
Query: 17 PSKKREYRVTNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNRVTVYQCLEGGVIAALQS 76
P+ KR + + N + + P F ++ + AT V+ G + L
Sbjct: 296 PACKRVFNI-NLVHTLEHPSVVCCVKFSNNGKY--LATGCNQAANVFDVQTGKKLFTLHE 352
Query: 77 YVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRT 136
D Y + A + DG +LV G + I++ D+S +K+ F GH I +
Sbjct: 353 E-SPDPSRDLYVRTIAFSPDG-KYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDF 410
Query: 137 QPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMD 196
+VS S D + RLW+V+TG CIL G V ++ P+D + IA +D
Sbjct: 411 SH-NGRFIVSGSGDRTARLWDVETGQCILKLEIENG----VTAIAISPNDQF-IAVGSLD 464
Query: 197 NTVKIWSMKEFWTYVEK 213
+++WS+ T VE+
Sbjct: 465 QIIRVWSVSG--TLVER 479
Score = 52 (23.4 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 19/60 (31%), Positives = 29/60 (48%)
Query: 307 AIGNREGKIFVWELQSSPPVLIARLS-HAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWD 365
A+G+ + I VW + + L+ RL H +S + A S D S +LS D I W+
Sbjct: 459 AVGSLDQIIRVWSVSGT---LVERLEGHKES---VYSIAFSPDSSILLSGSLDKTIKVWE 512
Score = 44 (20.5 bits), Expect = 8.5e-07, Sum P(2) = 8.5e-07
Identities = 21/82 (25%), Positives = 36/82 (43%)
Query: 292 IWFIKFSCDFHYNAAAIGNREGKIFVWELQSS--------PPVLIARLSHAQSKSPIRQT 343
++ I FS D + G+ + I VWELQ++ P I + ++ +
Sbjct: 487 VYSIAFSPDS--SILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHTDFVLSV 544
Query: 344 AMSYDGSTILSCCEDGAIWRWD 365
A+S D LS +D ++ WD
Sbjct: 545 AVSPDSRWGLSGSKDRSMQFWD 566
Score = 43 (20.2 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 28/119 (23%), Positives = 47/119 (39%)
Query: 253 ILSKSVDNEIVLWEPKMKEQSPGEGTAD---ILQKYPVPECD-IWFIKFSCDFHYNAAAI 308
+LS S+D I +WE + +S G I + D + + S D + +
Sbjct: 499 LLSGSLDKTIKVWELQAT-RSVGLSAIKPEGICKATYTGHTDFVLSVAVSPDSRWGLS-- 555
Query: 309 GNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCED--GAIWRWD 365
G+++ + W+LQ+ L + H K+ + S DG S D IW D
Sbjct: 556 GSKDRSMQFWDLQTGQSYLTCQ-GH---KNSVISVCFSPDGRQFASGSGDLRARIWSID 610
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 137 (53.3 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 44/160 (27%), Positives = 74/160 (46%)
Query: 110 IRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAG 169
I++ D + ++ GH +++ + P +VSAS+D+++++W V TG C+ F G
Sbjct: 174 IKLWDFQGFECIRTMHGHDHNVSSVAIMP-NGDHIVSASRDKTMKMWEVATGYCVKTFTG 232
Query: 170 AGGHRNEVLSVDFHPS-DIYRIASCGMDNTVKIW--SMKEFWTYVEKSFTWTDLPSKFPT 226
HR V V P+ D +ASC D TV++W + KE + + + S P
Sbjct: 233 ---HREWVRMV--RPNQDGTLLASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Query: 227 KYVQFPVFIASVHSNYVDCNRWLGDFILSKSVDNEIVLWE 266
P + S + G F+LS S D I +W+
Sbjct: 288 S--AHPTISEATGSENKKSGK-PGPFLLSGSRDKTIKMWD 324
Score = 134 (52.2 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 30/107 (28%), Positives = 57/107 (53%)
Query: 99 PFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 158
PFL++G + I++ D+S + VGH + + + P VVS + D+++R+W+
Sbjct: 309 PFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHP-GGRFVVSCADDKTLRIWDY 367
Query: 159 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
+ C+ + H + V S+DFH + Y + + +D TVK+W +
Sbjct: 368 KNKRCMKTLSA---HEHFVTSLDFHKASPY-VVTGSVDQTVKVWECR 410
Score = 133 (51.9 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 30/97 (30%), Positives = 52/97 (53%)
Query: 109 IIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFA 168
++ I + E H + S N+ +P P L+ S S+D+++++W++ TG+C++
Sbjct: 278 VVECISWAPESAHPTISEATGSENKKSGKP-GPFLL-SGSRDKTIKMWDISTGMCLMTLV 335
Query: 169 GAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
G H N V V FHP + + SC D T++IW K
Sbjct: 336 G---HDNWVRGVLFHPGGRF-VVSCADDKTLRIWDYK 368
Score = 115 (45.5 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 34/116 (29%), Positives = 54/116 (46%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
+V+ + I+V D ++ GH DS+ +I L+ S S D +++LW+ Q
Sbjct: 123 MVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTG-KLLASCSADMTIKLWDFQG 181
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFT 216
CI G H + V SV P+ + I S D T+K+W + Y K+FT
Sbjct: 182 FECIRTMHG---HDHNVSSVAIMPNGDH-IVSASRDKTMKMWEVAT--GYCVKTFT 231
Score = 103 (41.3 bits), Expect = 0.00089, Sum P(2) = 0.00089
Identities = 24/82 (29%), Positives = 42/82 (51%)
Query: 126 GHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPS 185
GH + + P+ SL+VSAS+D ++++W+ + G G H + V + F +
Sbjct: 106 GHRSPVTRVIFHPVF-SLMVSASEDATIKVWDYEAGDFERTLKG---HTDSVQDISFDQT 161
Query: 186 DIYRIASCGMDNTVKIWSMKEF 207
+ASC D T+K+W + F
Sbjct: 162 GKL-LASCSADMTIKLWDFQGF 182
Score = 53 (23.7 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 14/57 (24%), Positives = 28/57 (49%)
Query: 309 GNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWD 365
G+R+ I +W++ S+ L+ + H + +R G ++SC +D + WD
Sbjct: 314 GSRDKTIKMWDI-STGMCLMTLVGH---DNWVRGVLFHPGGRFVVSCADDKTLRIWD 366
Score = 42 (19.8 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 7/25 (28%), Positives = 12/25 (48%)
Query: 340 IRQTAMSYDGSTILSCCEDGAIWRW 364
+R + DG+ + SC D + W
Sbjct: 237 VRMVRPNQDGTLLASCSNDQTVRVW 261
Score = 40 (19.1 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 9/33 (27%), Positives = 19/33 (57%)
Query: 237 SVHSNYV---DCNRWLGDFILSKSVDNEIVLWE 266
S H ++V D ++ ++++ SVD + +WE
Sbjct: 377 SAHEHFVTSLDFHK-ASPYVVTGSVDQTVKVWE 408
>UNIPROTKB|F1NFT8 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9031
"Gallus gallus" [GO:0016593 "Cdc73/Paf1 complex" evidence=IEA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IEA] [GO:0035327
"transcriptionally active chromatin" evidence=IEA] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=IEA] [GO:0055087
"Ski complex" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087
OMA:IATGSHH IPI:IPI00584957 EMBL:AADN02040454
ProteinModelPortal:F1NFT8 PRIDE:F1NFT8 Ensembl:ENSGALT00000034634
Uniprot:F1NFT8
Length = 305
Score = 146 (56.5 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 39/117 (33%), Positives = 64/117 (54%)
Query: 87 YTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVS 146
+ +S A + DG +L +G I+GII + D++ KL + GH I + P L+V+
Sbjct: 150 FILSIAYSPDG-KYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP-DSQLLVT 207
Query: 147 ASKDESVRLWNVQTGICILIFAGA-GGHRNEVLSVDFHPSDIYRIASCGMDNTVKIW 202
AS D +++++VQ AG GH + VL+V F P D + ++S D +VK+W
Sbjct: 208 ASDDGYIKIYDVQHAN----LAGTLSGHGSWVLNVAFCPDDTHFVSSSS-DKSVKVW 259
Score = 112 (44.5 bits), Expect = 0.00099, P = 0.00099
Identities = 30/102 (29%), Positives = 52/102 (50%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
LV +G I++ DV + L + GHG + + P + VS+S D+SV++W+ T
Sbjct: 205 LVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFCP-DDTHFVSSSSDKSVKVWDAGT 263
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIW 202
C+ F H+++V V ++ S +I S G D + I+
Sbjct: 264 RTCVHTFFD---HQDQVWGVKYNGSGS-KIVSVGDDQEIHIY 301
>UNIPROTKB|Q5ZJH5 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9031
"Gallus gallus" [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0045638 "negative regulation of myeloid
cell differentiation" evidence=ISS] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISS] [GO:2001162
"positive regulation of histone H3-K79 methylation" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0055087 "Ski complex" evidence=ISS] [GO:0080182
"histone H3-K4 trimethylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW
EMBL:AJ720459 IPI:IPI00584957 RefSeq:NP_001005805.1
UniGene:Gga.4665 ProteinModelPortal:Q5ZJH5 GeneID:415359
KEGG:gga:415359 InParanoid:Q5ZJH5 NextBio:20818980 Uniprot:Q5ZJH5
Length = 305
Score = 146 (56.5 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 39/117 (33%), Positives = 64/117 (54%)
Query: 87 YTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVS 146
+ +S A + DG +L +G I+GII + D++ KL + GH I + P L+V+
Sbjct: 150 FILSIAYSPDG-KYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP-DSQLLVT 207
Query: 147 ASKDESVRLWNVQTGICILIFAGA-GGHRNEVLSVDFHPSDIYRIASCGMDNTVKIW 202
AS D +++++VQ AG GH + VL+V F P D + ++S D +VK+W
Sbjct: 208 ASDDGYIKIYDVQHAN----LAGTLSGHGSWVLNVAFCPDDTHFVSSSS-DKSVKVW 259
Score = 112 (44.5 bits), Expect = 0.00099, P = 0.00099
Identities = 30/102 (29%), Positives = 52/102 (50%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
LV +G I++ DV + L + GHG + + P + VS+S D+SV++W+ T
Sbjct: 205 LVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFCP-DDTHFVSSSSDKSVKVWDAGT 263
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIW 202
C+ F H+++V V ++ S +I S G D + I+
Sbjct: 264 RTCVHTFFD---HQDQVWGVKYNGSGS-KIVSVGDDQEIHIY 301
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 130 (50.8 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 36/114 (31%), Positives = 60/114 (52%)
Query: 89 VSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSAS 148
V+W+ + + LV+ + +++ DVS+ K K+ GH + + P + +L+VS S
Sbjct: 93 VAWSSDSN---LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGS 148
Query: 149 KDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIW 202
DESVR+W+V+TG C+ H + V +V F+ D I S D +IW
Sbjct: 149 FDESVRIWDVKTGKCLKTLPA---HSDPVSAVHFN-RDGSLIVSSSYDGLCRIW 198
Score = 128 (50.1 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 30/106 (28%), Positives = 56/106 (52%)
Query: 100 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 159
+L + + +I++ + K K+ GH I+++ +L+VSAS D+++++W+V
Sbjct: 59 WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS-DSNLLVSASDDKTLKIWDVS 117
Query: 160 TGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
+G C+ G H N V +F+P I S D +V+IW +K
Sbjct: 118 SGKCLKTLKG---HSNYVFCCNFNPQSNL-IVSGSFDESVRIWDVK 159
Score = 121 (47.7 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 32/113 (28%), Positives = 55/113 (48%)
Query: 91 WACNVDGIP-FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASK 149
+ CN + +V+G + +R+ DV K K+ H D ++ + SL+VS+S
Sbjct: 133 FCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR-DGSLIVSSSY 191
Query: 150 DESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIW 202
D R+W+ +G C+ V V F P+ Y +A+ +DNT+K+W
Sbjct: 192 DGLCRIWDTASGQCLKTLID--DDNPPVSFVKFSPNGKYILAAT-LDNTLKLW 241
Score = 57 (25.1 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 27/104 (25%), Positives = 46/104 (44%)
Query: 250 GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPV-PECDI----WFIKFSCDFHYN 304
G +IL+ ++DN + LW+ K + T +KY + + W + S D N
Sbjct: 226 GKYILAATLDNTLKLWDYS-KGKCLKTYTCHKNEKYCIFANFSVTGGKWIVSGSED---N 281
Query: 305 AAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYD 348
I N + K V +LQ V+I+ H +++ I A+ D
Sbjct: 282 LVYIWNLQTKEVVQKLQGHTDVVISTACHP-TENIIASAALEND 324
>DICTYBASE|DDB_G0283581 [details] [associations]
symbol:utp15 "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0006364 "rRNA processing"
evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IEA] [GO:0030515
"snoRNA binding" evidence=ISS] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISS] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR018983
Pfam:PF00400 Pfam:PF09384 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0283581 GO:GO:0005730
GenomeReviews:CM000153_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0030515 eggNOG:COG2319 EMBL:AAFI02000055 GO:GO:0006364
GO:GO:0005732 KO:K14549 RefSeq:XP_639030.1
ProteinModelPortal:Q54QV4 STRING:Q54QV4 PRIDE:Q54QV4
EnsemblProtists:DDB0237554 GeneID:8624158 KEGG:ddi:DDB_G0283581
InParanoid:Q54QV4 OMA:ADTAYGV Uniprot:Q54QV4
Length = 529
Score = 150 (57.9 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 49/181 (27%), Positives = 90/181 (49%)
Query: 28 KLQEGKRPLYAVVFNFIDSRYFNVFATVGGNRVTVYQCLEGGVIAALQSYVDEDKEESFY 87
KL+E + Y+ + ++S N VT C+ +I + V+E + SF
Sbjct: 29 KLKELQNKKYSSMITRVESNPINSKEVC----VTFGNCVR--IITSNSKKVEEREITSFR 82
Query: 88 TVSWACNV--DGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVV 145
+ + DG +V GG + II++IDVS++ + F GH I T+ ++ ++
Sbjct: 83 DTPYGASYRDDG-KLIVVGGEDPIIKLIDVSSKNTLRKFQGHTGGIQ--CTRFIEKGSLI 139
Query: 146 SASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRI-ASCGMDNTVKIWSM 204
S S D +VR W ++TG + + G H+++V + HP++ I + G D+ VK+W +
Sbjct: 140 SGSNDNTVRTWAIETGEQLQM---VGKHKDKVHCMTRHPTNGDNIWMTGGYDHCVKLWDI 196
Query: 205 K 205
+
Sbjct: 197 R 197
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 124 (48.7 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 30/85 (35%), Positives = 48/85 (56%)
Query: 126 GHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPS 185
GH + IN ++ P SL+VSAS+D ++++W+ ++G G H N V +DF +
Sbjct: 104 GHRNCINSVKFHP-SFSLMVSASEDATIKVWDFESGEFERTLKG---HTNAVQDIDFDKT 159
Query: 186 DIYRIASCGMDNTVKIWSMKEFWTY 210
+ASC D T+K+W +F TY
Sbjct: 160 GNL-LASCSADLTIKLW---DFQTY 180
Score = 118 (46.6 bits), Expect = 0.00038, P = 0.00038
Identities = 25/106 (23%), Positives = 58/106 (54%)
Query: 100 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 159
+L G + I++ +++ + +++GH + + +R P L+ S D+++R+W++
Sbjct: 318 YLATGSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHPCGKFLL-SVGDDKTIRVWDIA 376
Query: 160 TGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
G CI A H + + +DF + + IA+ G+D+ +K+W ++
Sbjct: 377 QGRCIKTINEA--HTHFISCLDFCLHNPH-IATGGVDDVIKVWKLQ 419
Score = 117 (46.2 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 28/95 (29%), Positives = 48/95 (50%)
Query: 110 IRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAG 169
I++ D K+ GH +++ +R P L+ S+S+D+++++W TG CI G
Sbjct: 172 IKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLI-SSSRDKTIKVWEAATGYCIKTLVG 230
Query: 170 AGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
H + V + D IASC D T+K W++
Sbjct: 231 ---HEDWVRKITVS-EDGSCIASCSNDQTIKTWNI 261
Score = 114 (45.2 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 29/102 (28%), Positives = 52/102 (50%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
+V+ + I+V D + + ++ GH +++ +I +L+ S S D +++LW+ QT
Sbjct: 121 MVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTG-NLLASCSADLTIKLWDFQT 179
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIW 202
C+ G H + V V F PS I+S D T+K+W
Sbjct: 180 YDCVKTLHG---HDHNVSCVRFTPSGDQLISS-SRDKTIKVW 217
Score = 61 (26.5 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 17/58 (29%), Positives = 28/58 (48%)
Query: 310 NREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAI 367
+R+ I VWE + + + H + +R+ +S DGS I SC D I W+ +
Sbjct: 209 SRDKTIKVWEAATGYCIKTL-VGH---EDWVRKITVSEDGSCIASCSNDQTIKTWNIV 262
Score = 53 (23.7 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 239 HSNYVDCNRWL--GDFILSKSVDNEIVLWE 266
H + V C R+ GD ++S S D I +WE
Sbjct: 189 HDHNVSCVRFTPSGDQLISSSRDKTIKVWE 218
Score = 50 (22.7 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 17/59 (28%), Positives = 26/59 (44%)
Query: 307 AIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWD 365
A G+R+ I +WEL + L + H + +R G +LS +D I WD
Sbjct: 320 ATGSRDKTIKIWELATGR-CLATYIGH---DNWVRAVRFHPCGKFLLSVGDDKTIRVWD 374
Score = 46 (21.3 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 27/88 (30%), Positives = 38/88 (43%)
Query: 239 HSNYVDCNRW--LGDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIK 296
H N+V R+ G F+LS D I +W+ +G ++ + E FI
Sbjct: 345 HDNWVRAVRFHPCGKFLLSVGDDKTIRVWDI-------AQGRC--IKT--INEAHTHFI- 392
Query: 297 FSC-DF--HYNAAAIGNREGKIFVWELQ 321
SC DF H A G + I VW+LQ
Sbjct: 393 -SCLDFCLHNPHIATGGVDDVIKVWKLQ 419
>FB|FBgn0027524 [details] [associations]
symbol:CG3909 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GeneTree:ENSGT00700000104507 KO:K12602 EMBL:AF132174
RefSeq:NP_649969.1 UniGene:Dm.3198 SMR:Q9XZ19 IntAct:Q9XZ19
MINT:MINT-1753051 STRING:Q9XZ19 EnsemblMetazoa:FBtr0082172
GeneID:41226 KEGG:dme:Dmel_CG3909 UCSC:CG3909-RA
FlyBase:FBgn0027524 InParanoid:Q9XZ19 OMA:HETWVEC OrthoDB:EOG4R7SSH
GenomeRNAi:41226 NextBio:822821 Uniprot:Q9XZ19
Length = 331
Score = 146 (56.5 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 52/178 (29%), Positives = 88/178 (49%)
Query: 29 LQEGKRPLYAVVFNFIDSRYFNVFATVGGNRVTVYQCLEGGVIAALQSYVDEDKEESFYT 88
L G L+ V F+ + +Y V + + ++++Y +E G A Q+ D + YT
Sbjct: 123 LSFGPVDLWTVQFSPCN-KY--VISGLNDGKISMYS-VETG--KAEQTL---DAQNGKYT 173
Query: 89 VSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSAS 148
+S A + DG ++ +G I+GII + DV+ K+ ++ GH + + P L+++AS
Sbjct: 174 LSIAYSPDG-KYIASGAIDGIITIFDVAAGKVVQTLEGHAMPVRSLCFSP-NSQLLLTAS 231
Query: 149 KDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKE 206
D ++L++V + GH + VL V F D AS DN+VKIW E
Sbjct: 232 DDGHMKLYDVTHSDVV---GTLSGHASWVLCVAFS-EDGKHFASSSSDNSVKIWDTSE 285
>CGD|CAL0005939 [details] [associations]
symbol:TUP1 species:5476 "Candida albicans" [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IGI;ISS;IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0016337 "cell-cell adhesion" evidence=IMP]
[GO:0045827 "negative regulation of isoprenoid metabolic process"
evidence=IMP] [GO:0009372 "quorum sensing" evidence=IMP]
[GO:0044409 "entry into host" evidence=IMP] [GO:0051834 "evasion or
tolerance of defenses of other organism involved in symbiotic
interaction" evidence=IMP] [GO:0009405 "pathogenesis" evidence=IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035690 "cellular
response to drug" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IEA] [GO:0000433 "negative regulation of
transcription from RNA polymerase II promoter by glucose"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0043156 "chromatin remodeling in
response to cation stress" evidence=IEA] [GO:0061418 "regulation of
transcription from RNA polymerase II promoter in response to
hypoxia" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001198 "negative
regulation of mating-type specific transcription from RNA
polymerase II promoter" evidence=IEA] [GO:1900429 "negative
regulation of filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:0097308
"cellular response to farnesol" evidence=IMP] [GO:0036171
"filamentous growth of a population of unicellular organisms in
response to chemical stimulus" evidence=IMP] [GO:0044114
"development of symbiont in host" evidence=IMP] [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0036180 "filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:0036166 "phenotypic switching"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] [GO:0036033 "mediator complex binding" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0001191
"RNA polymerase II transcription factor binding transcription
factor activity involved in negative regulation of transcription"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 134 (52.2 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 48/159 (30%), Positives = 76/159 (47%)
Query: 52 FATVGGNRVT-VYQCLEGGVIAAL-QSYVDEDKEES------FYTVSWACNVDGIPFLVA 103
F G N+ T V+ G ++A L +E+K+++ Y S + DG L
Sbjct: 214 FIATGCNKTTQVFNVTTGELVAKLIDESSNENKDDNTTASGDLYIRSVCFSPDG-KLLAT 272
Query: 104 GGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGIC 163
G + +IR+ D+S +++ K GH I + P LV S S D SVR+W+++T C
Sbjct: 273 GAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLV-SGSGDRSVRIWDLRTSQC 331
Query: 164 ILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIW 202
L + G V +V P D IA+ +D TV++W
Sbjct: 332 SLTLSIEDG----VTTVAVSP-DGKLIAAGSLDRTVRVW 365
Score = 120 (47.3 bits), Expect = 0.00031, P = 0.00031
Identities = 61/261 (23%), Positives = 112/261 (42%)
Query: 11 LVGSLTPSKKREYRVTNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGG 69
LV L E + N G + +V F+ D + + AT ++ + ++
Sbjct: 233 LVAKLIDESSNENKDDNTTASGDLYIRSVCFS-PDGK---LLATGAEDKLIRIWDLSTKR 288
Query: 70 VIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGD 129
+I L+ + E+ Y++ + + D LV+G + +R+ D+ + + + D
Sbjct: 289 IIKILRGH-----EQDIYSLDFFPDGDR---LVSGSGDRSVRIWDLRTSQCSLT-LSIED 339
Query: 130 SINEIRTQPLKPSLVVSASKDESVRLWNVQTGICI-LIFAG---AGGHRNEVLSVDFHPS 185
+ + P L+ + S D +VR+W+ TG + + +G GH + V SV F +
Sbjct: 340 GVTTVAVSP-DGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNN 398
Query: 186 DIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDC 245
+IAS +D TVK+W ++ KS D S Y+ F+ SV C
Sbjct: 399 G-EQIASGSLDRTVKLWHLEG------KS----DKKSTCEVTYIGHKDFVLSV------C 441
Query: 246 NRWLGDFILSKSVDNEIVLWE 266
++ILS S D ++ W+
Sbjct: 442 CTPDNEYILSGSKDRGVIFWD 462
Score = 58 (25.5 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 27/120 (22%), Positives = 52/120 (43%)
Query: 250 GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAI- 308
G+ I S S+D + LW ++ +S + T ++ Y + D F+ C N +
Sbjct: 399 GEQIASGSLDRTVKLWH--LEGKSDKKSTCEVT--Y-IGHKD--FVLSVCCTPDNEYILS 451
Query: 309 GNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSC----CEDGAIWRW 364
G+++ + W+ S P+L+ + H S + + S I + C+ IW+W
Sbjct: 452 GSKDRGVIFWDQASGNPLLMLQ-GHRNSVISVAVSLNSKGTEGIFATGSGDCK-ARIWKW 509
>UNIPROTKB|P0CY34 [details] [associations]
symbol:TUP1 "Transcriptional repressor TUP1" species:237561
"Candida albicans SC5314" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009372 "quorum sensing" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016337 "cell-cell adhesion"
evidence=IMP] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0035690 "cellular response to drug" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036171 "filamentous growth of a
population of unicellular organisms in response to chemical
stimulus" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0044114 "development of symbiont in host"
evidence=IMP] [GO:0044182 "filamentous growth of a population of
unicellular organisms" evidence=IMP] [GO:0044409 "entry into host"
evidence=IMP] [GO:0045827 "negative regulation of isoprenoid
metabolic process" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IGI;IMP] [GO:0051834
"evasion or tolerance of defenses of other organism involved in
symbiotic interaction" evidence=IMP] [GO:0071216 "cellular response
to biotic stimulus" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0097308 "cellular response to
farnesol" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 134 (52.2 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 48/159 (30%), Positives = 76/159 (47%)
Query: 52 FATVGGNRVT-VYQCLEGGVIAAL-QSYVDEDKEES------FYTVSWACNVDGIPFLVA 103
F G N+ T V+ G ++A L +E+K+++ Y S + DG L
Sbjct: 214 FIATGCNKTTQVFNVTTGELVAKLIDESSNENKDDNTTASGDLYIRSVCFSPDG-KLLAT 272
Query: 104 GGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGIC 163
G + +IR+ D+S +++ K GH I + P LV S S D SVR+W+++T C
Sbjct: 273 GAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLV-SGSGDRSVRIWDLRTSQC 331
Query: 164 ILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIW 202
L + G V +V P D IA+ +D TV++W
Sbjct: 332 SLTLSIEDG----VTTVAVSP-DGKLIAAGSLDRTVRVW 365
Score = 120 (47.3 bits), Expect = 0.00031, P = 0.00031
Identities = 61/261 (23%), Positives = 112/261 (42%)
Query: 11 LVGSLTPSKKREYRVTNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGG 69
LV L E + N G + +V F+ D + + AT ++ + ++
Sbjct: 233 LVAKLIDESSNENKDDNTTASGDLYIRSVCFS-PDGK---LLATGAEDKLIRIWDLSTKR 288
Query: 70 VIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGD 129
+I L+ + E+ Y++ + + D LV+G + +R+ D+ + + + D
Sbjct: 289 IIKILRGH-----EQDIYSLDFFPDGDR---LVSGSGDRSVRIWDLRTSQCSLT-LSIED 339
Query: 130 SINEIRTQPLKPSLVVSASKDESVRLWNVQTGICI-LIFAG---AGGHRNEVLSVDFHPS 185
+ + P L+ + S D +VR+W+ TG + + +G GH + V SV F +
Sbjct: 340 GVTTVAVSP-DGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNN 398
Query: 186 DIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDC 245
+IAS +D TVK+W ++ KS D S Y+ F+ SV C
Sbjct: 399 G-EQIASGSLDRTVKLWHLEG------KS----DKKSTCEVTYIGHKDFVLSV------C 441
Query: 246 NRWLGDFILSKSVDNEIVLWE 266
++ILS S D ++ W+
Sbjct: 442 CTPDNEYILSGSKDRGVIFWD 462
Score = 58 (25.5 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 27/120 (22%), Positives = 52/120 (43%)
Query: 250 GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAI- 308
G+ I S S+D + LW ++ +S + T ++ Y + D F+ C N +
Sbjct: 399 GEQIASGSLDRTVKLWH--LEGKSDKKSTCEVT--Y-IGHKD--FVLSVCCTPDNEYILS 451
Query: 309 GNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSC----CEDGAIWRW 364
G+++ + W+ S P+L+ + H S + + S I + C+ IW+W
Sbjct: 452 GSKDRGVIFWDQASGNPLLMLQ-GHRNSVISVAVSLNSKGTEGIFATGSGDCK-ARIWKW 509
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 115 (45.5 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 33/114 (28%), Positives = 54/114 (47%)
Query: 94 NVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESV 153
N DG L + + + V D + K GH +N P LV + S D +V
Sbjct: 119 NTDG-SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTV 177
Query: 154 RLWNVQTGICILIFAGAGGHRNEVLSVDFHP-SDIYRIASCGMDNTVKIWSMKE 206
+LW+++ I F +VL+V F+ SD +I S G+DN +K+W +++
Sbjct: 178 KLWDIRKKAAIQTFQNT----YQVLAVTFNDTSD--QIISGGIDNDIKVWDLRQ 225
Score = 74 (31.1 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 28/113 (24%), Positives = 52/113 (46%)
Query: 250 GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIG 309
G ++LS ++DN + +W+ ++ +P E I Q V + ++ S + A G
Sbjct: 248 GSYLLSNAMDNTVRVWD--VRPFAPKERCVKIFQGN-VHNFEKNLLRCSWSPDGSKIAAG 304
Query: 310 NREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIW 362
+ + ++VW+ +S +L HA S I + A D ILS D ++
Sbjct: 305 SADRFVYVWDT-TSRRILYKLPGHAGS---INEVAFHPDEPIILSASSDKRLY 353
Score = 63 (27.2 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 309 GNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 368
G + I VW+L+ + R HA S + + ++S +GS +LS D + WD P
Sbjct: 212 GGIDNDIKVWDLRQNKLTYTMR-GHADSVTGL---SLSSEGSYLLSNAMDNTVRVWDVRP 267
Score = 49 (22.3 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 29/122 (23%), Positives = 54/122 (44%)
Query: 251 DFILSKSVDNEIVLWEPKMKEQS-PGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIG 309
D I+S +DN+I +W+ + + + G AD + + S + Y +
Sbjct: 207 DQIISGGIDNDIKVWDLRQNKLTYTMRGHAD----------SVTGLSLSSEGSY---LLS 253
Query: 310 NR-EGKIFVWELQSSPP----VLIARLS-HAQSKSPIRQTAMSYDGSTILSCCEDGAIWR 363
N + + VW+++ P V I + + H K+ +R + S DGS I + D ++
Sbjct: 254 NAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLR-CSWSPDGSKIAAGSADRFVYV 312
Query: 364 WD 365
WD
Sbjct: 313 WD 314
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 115 (45.5 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 33/114 (28%), Positives = 54/114 (47%)
Query: 94 NVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESV 153
N DG L + + + V D + K GH +N P LV + S D +V
Sbjct: 119 NTDG-SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTV 177
Query: 154 RLWNVQTGICILIFAGAGGHRNEVLSVDFHP-SDIYRIASCGMDNTVKIWSMKE 206
+LW+++ I F +VL+V F+ SD +I S G+DN +K+W +++
Sbjct: 178 KLWDIRKKAAIQTFQNT----YQVLAVTFNDTSD--QIISGGIDNDIKVWDLRQ 225
Score = 74 (31.1 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 28/113 (24%), Positives = 52/113 (46%)
Query: 250 GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIG 309
G ++LS ++DN + +W+ ++ +P E I Q V + ++ S + A G
Sbjct: 248 GSYLLSNAMDNTVRVWD--VRPFAPKERCVKIFQGN-VHNFEKNLLRCSWSPDGSKIAAG 304
Query: 310 NREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIW 362
+ + ++VW+ +S +L HA S I + A D ILS D ++
Sbjct: 305 SADRFVYVWDT-TSRRILYKLPGHAGS---INEVAFHPDEPIILSASSDKRLY 353
Score = 63 (27.2 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 309 GNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 368
G + I VW+L+ + R HA S + + ++S +GS +LS D + WD P
Sbjct: 212 GGIDNDIKVWDLRQNKLTYTMR-GHADSVTGL---SLSSEGSYLLSNAMDNTVRVWDVRP 267
Score = 49 (22.3 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 29/122 (23%), Positives = 54/122 (44%)
Query: 251 DFILSKSVDNEIVLWEPKMKEQS-PGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIG 309
D I+S +DN+I +W+ + + + G AD + + S + Y +
Sbjct: 207 DQIISGGIDNDIKVWDLRQNKLTYTMRGHAD----------SVTGLSLSSEGSY---LLS 253
Query: 310 NR-EGKIFVWELQSSPP----VLIARLS-HAQSKSPIRQTAMSYDGSTILSCCEDGAIWR 363
N + + VW+++ P V I + + H K+ +R + S DGS I + D ++
Sbjct: 254 NAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLR-CSWSPDGSKIAAGSADRFVYV 312
Query: 364 WD 365
WD
Sbjct: 313 WD 314
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 114 (45.2 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 32/114 (28%), Positives = 54/114 (47%)
Query: 94 NVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESV 153
N DG L + + + V D + K GH +N P LV + S D +V
Sbjct: 119 NTDG-SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTV 177
Query: 154 RLWNVQTGICILIFAGAGGHRNEVLSVDFHP-SDIYRIASCGMDNTVKIWSMKE 206
+LW+++ + F +VL+V F+ SD +I S G+DN +K+W +++
Sbjct: 178 KLWDIRKKAAVQTFQNT----YQVLAVTFNDTSD--QIISGGIDNDIKVWDLRQ 225
Score = 75 (31.5 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 29/113 (25%), Positives = 52/113 (46%)
Query: 250 GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIG 309
G ++LS ++DN + +W+ ++ +P E I Q V + ++ S + A G
Sbjct: 248 GSYLLSNAMDNTVRVWD--VRPFAPKERCVKIFQGN-VHNFEKNLLRCSWSPDGSKIAAG 304
Query: 310 NREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIW 362
+ + ++VW+ +S VL HA S I + A D ILS D ++
Sbjct: 305 SADRFVYVWDT-TSRRVLYKLPGHAGS---INEVAFHPDEPIILSASSDKRLY 353
Score = 63 (27.2 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 309 GNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 368
G + I VW+L+ + R HA S + + ++S +GS +LS D + WD P
Sbjct: 212 GGIDNDIKVWDLRQNKLTYTMR-GHADSVTGL---SLSSEGSYLLSNAMDNTVRVWDVRP 267
Score = 49 (22.3 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 29/122 (23%), Positives = 54/122 (44%)
Query: 251 DFILSKSVDNEIVLWEPKMKEQS-PGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIG 309
D I+S +DN+I +W+ + + + G AD + + S + Y +
Sbjct: 207 DQIISGGIDNDIKVWDLRQNKLTYTMRGHAD----------SVTGLSLSSEGSY---LLS 253
Query: 310 NR-EGKIFVWELQSSPP----VLIARLS-HAQSKSPIRQTAMSYDGSTILSCCEDGAIWR 363
N + + VW+++ P V I + + H K+ +R + S DGS I + D ++
Sbjct: 254 NAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLR-CSWSPDGSKIAAGSADRFVYV 312
Query: 364 WD 365
WD
Sbjct: 313 WD 314
>SGD|S000001885 [details] [associations]
symbol:CDC4 "F-box protein required for G1/S and G2/M
transition" species:4932 "Saccharomyces cerevisiae" [GO:0000086
"G2/M transition of mitotic cell cycle" evidence=IGI;IMP]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0043224 "nuclear SCF
ubiquitin ligase complex" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA;IPI]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IMP]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016363 "nuclear matrix"
evidence=IDA] [GO:0007126 "meiosis" evidence=IMP] [GO:0051301 "cell
division" evidence=IEA] [GO:0030435 "sporulation resulting in
formation of a cellular spore" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
UniPathway:UPA00143 SGD:S000001885 GO:GO:0007126 GO:GO:0000086
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0000082 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:D50617 EMBL:BK006940
SUPFAM:SSF81383 GO:GO:0030435 GO:GO:0016363 GO:GO:0042787
GO:GO:0043130 EMBL:Z46255 GeneTree:ENSGT00550000075528
GO:GO:0031146 EMBL:X05625 PIR:S56245 RefSeq:NP_116585.1 PDB:1NEX
PDB:2P63 PDB:3MKS PDB:3V7D PDBsum:1NEX PDBsum:2P63 PDBsum:3MKS
PDBsum:3V7D ProteinModelPortal:P07834 SMR:P07834 DIP:DIP-1625N
IntAct:P07834 MINT:MINT-389524 STRING:P07834 PaxDb:P07834
PRIDE:P07834 EnsemblFungi:YFL009W GeneID:850539 KEGG:sce:YFL009W
CYGD:YFL009w HOGENOM:HOG000111495 KO:K03361 OMA:VVTCLQH
OrthoDB:EOG4B2X5M EvolutionaryTrace:P07834 NextBio:966298
Genevestigator:P07834 GermOnline:YFL009W GO:GO:0043224
Uniprot:P07834
Length = 779
Score = 152 (58.6 bits), Expect = 2.2e-07, Sum P(3) = 2.2e-07
Identities = 48/176 (27%), Positives = 84/176 (47%)
Query: 100 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 159
+++ G + +IRV D N+K GH + ++ ++VS S D +VR+W+++
Sbjct: 394 YVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYA--HGGILVSGSTDRTVRVWDIK 451
Query: 160 TGICILIFAGAGGHRNEVLSVDF-HPSDIYRIASCGMDNTVKIWSM-KEFWTYVEKSFTW 217
G C +F G H + V +D +I I + DNT+ +W + KE + V
Sbjct: 452 KGCCTHVFKG---HNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKE--SSVPDHGEE 506
Query: 218 TDLPSKFPTKYVQFPVFIASV--HSNYVDCNRWLGDFILSKSVDNEIVLWE-PKMK 270
D P F T + P F+ + H V G+ ++S S DN +++W+ +MK
Sbjct: 507 HDYPLVFHTPE-ENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMK 561
Score = 124 (48.7 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 35/133 (26%), Positives = 62/133 (46%)
Query: 134 IRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASC 193
+RT ++VVS S D ++ +W+V C+ I +G H + + S + + R S
Sbjct: 533 VRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSG---HTDRIYST-IYDHERKRCISA 588
Query: 194 GMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWLGDFI 253
MD T++IW ++ W E S+ T+ S P + ++ H+ V R F+
Sbjct: 589 SMDTTIRIWDLENIWNNGECSYA-TNSAS--PCAKILGAMYTLQGHTALVGLLRLSDKFL 645
Query: 254 LSKSVDNEIVLWE 266
+S + D I W+
Sbjct: 646 VSAAADGSIRGWD 658
Score = 42 (19.8 bits), Expect = 2.2e-07, Sum P(3) = 2.2e-07
Identities = 9/35 (25%), Positives = 15/35 (42%)
Query: 2 ARTAIGCEPLVGSLTPSKKREYRVTNKLQEGKRPL 36
A T + + GS + + N ++EG PL
Sbjct: 150 APTTVNAATITGSDVSNNVNSATINNPMEEGALPL 184
Score = 39 (18.8 bits), Expect = 2.2e-07, Sum P(3) = 2.2e-07
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 352 ILSCCEDGAIWRWDA 366
++S DG+I WDA
Sbjct: 645 LVSAAADGSIRGWDA 659
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 115 (45.5 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 33/114 (28%), Positives = 54/114 (47%)
Query: 94 NVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESV 153
N DG L + + + V D + K GH +N P LV + S D +V
Sbjct: 119 NTDG-SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTV 177
Query: 154 RLWNVQTGICILIFAGAGGHRNEVLSVDFHP-SDIYRIASCGMDNTVKIWSMKE 206
+LW+++ I F +VL+V F+ SD +I S G+DN +K+W +++
Sbjct: 178 KLWDIRKKAAIQTFQNT----YQVLAVTFNDTSD--QIISGGIDNDIKVWDLRQ 225
Score = 73 (30.8 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 28/113 (24%), Positives = 52/113 (46%)
Query: 250 GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIG 309
G ++LS ++DN + +W+ ++ +P E I Q V + ++ S + A G
Sbjct: 248 GSYLLSNAMDNTVRVWD--VRPFAPKERCVRIFQGN-VHNFEKNLLRCSWSPDGSKIAAG 304
Query: 310 NREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIW 362
+ + ++VW+ +S +L HA S I + A D ILS D ++
Sbjct: 305 SADRFVYVWDT-TSRRILYKLPGHAGS---INEVAFHPDEPIILSASSDKRLY 353
Score = 63 (27.2 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 309 GNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 368
G + I VW+L+ + R HA S + + ++S +GS +LS D + WD P
Sbjct: 212 GGIDNDIKVWDLRQNKLTYTMR-GHADSVTGL---SLSSEGSYLLSNAMDNTVRVWDVRP 267
Score = 50 (22.7 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 28/122 (22%), Positives = 53/122 (43%)
Query: 251 DFILSKSVDNEIVLWEPKMKEQS-PGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIG 309
D I+S +DN+I +W+ + + + G AD + + S + Y +
Sbjct: 207 DQIISGGIDNDIKVWDLRQNKLTYTMRGHAD----------SVTGLSLSSEGSY---LLS 253
Query: 310 NR-EGKIFVWELQS-SPPVLIARLS----HAQSKSPIRQTAMSYDGSTILSCCEDGAIWR 363
N + + VW+++ +P R+ H K+ +R + S DGS I + D ++
Sbjct: 254 NAMDNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLLR-CSWSPDGSKIAAGSADRFVYV 312
Query: 364 WD 365
WD
Sbjct: 313 WD 314
>TAIR|locus:2169769 [details] [associations]
symbol:AT5G24320 "AT5G24320" species:3702 "Arabidopsis
thaliana" [GO:0004871 "signal transducer activity" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007165 "signal transduction"
evidence=ISS] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0016926 "protein
desumoylation" evidence=RCA] [GO:0050665 "hydrogen peroxide
biosynthetic process" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 IPI:IPI00531542
RefSeq:NP_197820.2 UniGene:At.43910 ProteinModelPortal:F4KH31
SMR:F4KH31 PRIDE:F4KH31 EnsemblPlants:AT5G24320.2 GeneID:832502
KEGG:ath:AT5G24320 OMA:KRIIGFQ PhylomeDB:F4KH31 Uniprot:F4KH31
Length = 698
Score = 138 (53.6 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 38/98 (38%), Positives = 53/98 (54%)
Query: 109 IIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFA 168
I RV+D + LH+ F+GH I +I K + ++SAS D SVRLW + C+ IF+
Sbjct: 341 IFRVLD---KPLHE-FLGHSGDILDISWS--KNNRLLSASVDNSVRLWQIGCEDCLGIFS 394
Query: 169 GAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKE 206
H N V SV F+P D S +D V+IWS +
Sbjct: 395 ----HNNYVTSVQFNPVDDDHFISGSIDGKVRIWSASQ 428
Score = 56 (24.8 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 10/34 (29%), Positives = 21/34 (61%)
Query: 336 SKSPIRQTAMSY--DGSTILSCCEDGAIWRWDAI 367
S++ Q + S+ DG I+S C+D +++ W+ +
Sbjct: 532 SRNAGNQISASFTADGKHIVSACDDSSVYVWNCV 565
>WB|WBGene00003009 [details] [associations]
symbol:lin-23 species:6239 "Caenorhabditis elegans"
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0040015 "negative regulation of multicellular organism growth"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] [GO:0008285 "negative regulation of
cell proliferation" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0006898 GO:GO:0005737 GO:GO:0040007
GO:GO:0040010 GO:GO:0008285 GO:GO:0051301 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0010171 GO:GO:0040011 GO:GO:0048812 SUPFAM:SSF81383
GO:GO:0007049 GO:GO:0040035 GO:GO:0040015 EMBL:FO080748
HOGENOM:HOG000006638 KO:K03362 GeneTree:ENSGT00690000101849
EMBL:AF275253 PIR:T16607 RefSeq:NP_495285.1 UniGene:Cel.17632
ProteinModelPortal:Q09990 SMR:Q09990 STRING:Q09990 PaxDb:Q09990
EnsemblMetazoa:K10B2.1 GeneID:174058 KEGG:cel:CELE_K10B2.1
UCSC:K10B2.1 CTD:174058 WormBase:K10B2.1 InParanoid:Q09990
OMA:IKVWSMD NextBio:882327 Uniprot:Q09990
Length = 665
Score = 130 (50.8 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 32/104 (30%), Positives = 57/104 (54%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
+++G + +RV DV + K+ + H +++ +R ++V+ SKD S+ +W++ +
Sbjct: 275 IISGSSDATVRVWDVETGECIKTLIHHCEAVLHLR---FANGIMVTCSKDRSIAVWDMVS 331
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
I I GHR V VDF D Y +++ G D T+K+WSM
Sbjct: 332 PRDITIRRVLVGHRAAVNVVDF--DDRYIVSASG-DRTIKVWSM 372
Score = 64 (27.6 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 33/131 (25%), Positives = 53/131 (40%)
Query: 239 HSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKE-QSPGEGTADILQKYPVPECDIWFIKF 297
H + C ++ G ++S S DN I LW+ EG ++++ C I+F
Sbjct: 384 HRRGIACLQYRGRLVVSGSSDNTIRLWDIHSGVCLRVLEGHEELVR------C----IRF 433
Query: 298 SCDFHYNAAAIGNREGKIFVWELQSS--PPVLIARLSHAQSKSPI-RQTAMSYDGSTILS 354
G +GKI VW+LQ++ P L + + R + +D I+S
Sbjct: 434 D----EKRIVSGAYDGKIKVWDLQAALDPRALSSEICLCSLVQHTGRVFRLQFDDFQIVS 489
Query: 355 CCEDGAIWRWD 365
D I WD
Sbjct: 490 SSHDDTILIWD 500
>UNIPROTKB|Q09990 [details] [associations]
symbol:lin-23 "F-box/WD repeat-containing protein lin-23"
species:6239 "Caenorhabditis elegans" [GO:0005737 "cytoplasm"
evidence=NAS] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0008285
GO:GO:0051301 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010171 GO:GO:0040011
GO:GO:0048812 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0040035
GO:GO:0040015 EMBL:FO080748 HOGENOM:HOG000006638 KO:K03362
GeneTree:ENSGT00690000101849 EMBL:AF275253 PIR:T16607
RefSeq:NP_495285.1 UniGene:Cel.17632 ProteinModelPortal:Q09990
SMR:Q09990 STRING:Q09990 PaxDb:Q09990 EnsemblMetazoa:K10B2.1
GeneID:174058 KEGG:cel:CELE_K10B2.1 UCSC:K10B2.1 CTD:174058
WormBase:K10B2.1 InParanoid:Q09990 OMA:IKVWSMD NextBio:882327
Uniprot:Q09990
Length = 665
Score = 130 (50.8 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 32/104 (30%), Positives = 57/104 (54%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
+++G + +RV DV + K+ + H +++ +R ++V+ SKD S+ +W++ +
Sbjct: 275 IISGSSDATVRVWDVETGECIKTLIHHCEAVLHLR---FANGIMVTCSKDRSIAVWDMVS 331
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
I I GHR V VDF D Y +++ G D T+K+WSM
Sbjct: 332 PRDITIRRVLVGHRAAVNVVDF--DDRYIVSASG-DRTIKVWSM 372
Score = 64 (27.6 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 33/131 (25%), Positives = 53/131 (40%)
Query: 239 HSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKE-QSPGEGTADILQKYPVPECDIWFIKF 297
H + C ++ G ++S S DN I LW+ EG ++++ C I+F
Sbjct: 384 HRRGIACLQYRGRLVVSGSSDNTIRLWDIHSGVCLRVLEGHEELVR------C----IRF 433
Query: 298 SCDFHYNAAAIGNREGKIFVWELQSS--PPVLIARLSHAQSKSPI-RQTAMSYDGSTILS 354
G +GKI VW+LQ++ P L + + R + +D I+S
Sbjct: 434 D----EKRIVSGAYDGKIKVWDLQAALDPRALSSEICLCSLVQHTGRVFRLQFDDFQIVS 489
Query: 355 CCEDGAIWRWD 365
D I WD
Sbjct: 490 SSHDDTILIWD 500
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 146 (56.5 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 42/115 (36%), Positives = 59/115 (51%)
Query: 93 CNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPS--LVVSASKD 150
C+ DG LV + ++V ++ S H IN +R P L+VSAS D
Sbjct: 112 CS-DG-QSLVTASDDKTVKVWSTHRQRFLFSLTQH---INWVRCAKFSPDGRLIVSASDD 166
Query: 151 ESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
++V+LW+ + CI + GG V VDFHPS IA+ GMDNTVK+W +
Sbjct: 167 KTVKLWDKTSRECIHSYCEHGGF---VTYVDFHPSGTC-IAAAGMDNTVKVWDAR 217
>RGD|1309121 [details] [associations]
symbol:Fbxw11 "F-box and WD repeat domain containing 11"
species:10116 "Rattus norvegicus" [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006470
"protein dephosphorylation" evidence=ISO] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=ISO] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0031648 "protein destabilization" evidence=ISO] [GO:0042347
"negative regulation of NF-kappaB import into nucleus"
evidence=ISO] [GO:0042753 "positive regulation of circadian rhythm"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045862 "positive regulation
of proteolysis" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 RGD:1309121 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 IPI:IPI00368750 Ensembl:ENSRNOT00000005874
UCSC:RGD:1309121 ArrayExpress:F1M7I4 Uniprot:F1M7I4
Length = 493
Score = 132 (51.5 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 31/103 (30%), Positives = 56/103 (54%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
+V G + +RV DV+ ++ + + H +++ +R L+V+ SKD S+ +W++ +
Sbjct: 244 IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLR---FSNGLMVTCSKDRSIAVWDMAS 300
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWS 203
I + GHR V VDF D Y +++ G D T+K+WS
Sbjct: 301 ATDITLRRVLVGHRAAVNVVDF--DDKYIVSASG-DRTIKVWS 340
Score = 58 (25.5 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 33/132 (25%), Positives = 55/132 (41%)
Query: 239 HSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKE-QSPGEGTADILQKYPVPECDIWFIKF 297
H + C ++ ++S S DN I LW+ + EG ++++ C I+F
Sbjct: 353 HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR------C----IRF 402
Query: 298 SCDFHYNAAAI-GNREGKIFVWELQSS--PPVLIARLS-HAQSKSPIRQTAMSYDGSTIL 353
N + G +GKI VW+LQ++ P + L + R + +D I+
Sbjct: 403 D-----NKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQII 457
Query: 354 SCCEDGAIWRWD 365
S D I WD
Sbjct: 458 SSSHDDTILIWD 469
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 135 (52.6 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 44/160 (27%), Positives = 74/160 (46%)
Query: 110 IRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAG 169
I++ D + ++ GH +++ + P +VSAS+D+++++W V TG C+ F G
Sbjct: 174 IKLWDFQGFECIRTMHGHDHNVSSVAIMP-NGDHIVSASRDKTIKMWEVATGYCVKTFTG 232
Query: 170 AGGHRNEVLSVDFHPS-DIYRIASCGMDNTVKIW--SMKEFWTYVEKSFTWTDLPSKFPT 226
HR V V P+ D IAS D TV++W + KE + + + S P
Sbjct: 233 ---HREWVRMV--RPNQDGTLIASSSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Query: 227 KYVQFPVFIASVHSNYVDCNRWLGDFILSKSVDNEIVLWE 266
P + + S + G F+LS S D I +W+
Sbjct: 288 S--AHPTILEATGSETKKSGK-PGPFLLSGSRDKTIKMWD 324
Score = 129 (50.5 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 30/107 (28%), Positives = 56/107 (52%)
Query: 99 PFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 158
PFL++G + I++ DVS + VGH + + + P +VS + D+++R+W+
Sbjct: 309 PFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHP-GGKYIVSCADDKTLRIWDY 367
Query: 159 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
+ C + H + V S+DFH + Y + + +D TVK+W +
Sbjct: 368 KNKRCTKTLSA---HEHFVTSLDFHKTAPY-VVTGSVDQTVKVWECR 410
Score = 123 (48.4 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 25/67 (37%), Positives = 39/67 (58%)
Query: 140 KPS-LVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNT 198
KP ++S S+D+++++W+V G+C++ G H N V V HP Y I SC D T
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSIGMCLMTLVG---HDNWVRGVLVHPGGKY-IVSCADDKT 361
Query: 199 VKIWSMK 205
++IW K
Sbjct: 362 LRIWDYK 368
Score = 116 (45.9 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 34/116 (29%), Positives = 54/116 (46%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
+V+ + I+V D ++ GH DS+ +I L+ S S D +++LW+ Q
Sbjct: 123 IVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTG-KLLASCSADMTIKLWDFQG 181
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFT 216
CI G H + V SV P+ + I S D T+K+W + Y K+FT
Sbjct: 182 FECIRTMHG---HDHNVSSVAIMPNGDH-IVSASRDKTIKMWEVAT--GYCVKTFT 231
Score = 108 (43.1 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 25/83 (30%), Positives = 44/83 (53%)
Query: 126 GHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDF-HP 184
GH + + P+ S++VSAS+D ++++W+ +TG G H + V + F H
Sbjct: 106 GHRSPVTRVIFHPVF-SVIVSASEDATIKVWDHETGDFERTLKG---HTDSVQDISFDHT 161
Query: 185 SDIYRIASCGMDNTVKIWSMKEF 207
+ +ASC D T+K+W + F
Sbjct: 162 GKL--LASCSADMTIKLWDFQGF 182
Score = 52 (23.4 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 15/57 (26%), Positives = 28/57 (49%)
Query: 309 GNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWD 365
G+R+ I +W++ S L+ + H + +R + G I+SC +D + WD
Sbjct: 314 GSRDKTIKMWDV-SIGMCLMTLVGH---DNWVRGVLVHPGGKYIVSCADDKTLRIWD 366
Score = 40 (19.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 9/33 (27%), Positives = 19/33 (57%)
Query: 237 SVHSNYV---DCNRWLGDFILSKSVDNEIVLWE 266
S H ++V D ++ ++++ SVD + +WE
Sbjct: 377 SAHEHFVTSLDFHK-TAPYVVTGSVDQTVKVWE 408
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 115 (45.5 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 33/114 (28%), Positives = 54/114 (47%)
Query: 94 NVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESV 153
N DG L + + + V D + K GH +N P LV + S D +V
Sbjct: 118 NTDG-SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTV 176
Query: 154 RLWNVQTGICILIFAGAGGHRNEVLSVDFHP-SDIYRIASCGMDNTVKIWSMKE 206
+LW+++ I F +VL+V F+ SD +I S G+DN +K+W +++
Sbjct: 177 KLWDIRKKAAIQTFQNT----YQVLAVTFNDTSD--QIISGGIDNDIKVWDLRQ 224
Score = 72 (30.4 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 27/113 (23%), Positives = 52/113 (46%)
Query: 250 GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIG 309
G ++LS ++DN + +W+ ++ +P E I Q V + ++ S + A G
Sbjct: 247 GSYLLSNAMDNTVRVWD--VRPFAPKERCVKIFQGN-VHNFEKNLLRCSWSPDGSKIAAG 303
Query: 310 NREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIW 362
+ + ++VW+ +S +L HA S I + A D I+S D ++
Sbjct: 304 SADRFVYVWDT-TSRRILYKLPGHAGS---INEVAFHPDEPIIISASSDKRLY 352
Score = 63 (27.2 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 309 GNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 368
G + I VW+L+ + R HA S + + ++S +GS +LS D + WD P
Sbjct: 211 GGIDNDIKVWDLRQNKLTYTMR-GHADSVTGL---SLSSEGSYLLSNAMDNTVRVWDVRP 266
Score = 49 (22.3 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 29/122 (23%), Positives = 54/122 (44%)
Query: 251 DFILSKSVDNEIVLWEPKMKEQS-PGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIG 309
D I+S +DN+I +W+ + + + G AD + + S + Y +
Sbjct: 206 DQIISGGIDNDIKVWDLRQNKLTYTMRGHAD----------SVTGLSLSSEGSY---LLS 252
Query: 310 NR-EGKIFVWELQSSPP----VLIARLS-HAQSKSPIRQTAMSYDGSTILSCCEDGAIWR 363
N + + VW+++ P V I + + H K+ +R + S DGS I + D ++
Sbjct: 253 NAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLR-CSWSPDGSKIAAGSADRFVYV 311
Query: 364 WD 365
WD
Sbjct: 312 WD 313
>UNIPROTKB|J9P544 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:J9P544 Ensembl:ENSCAFT00000045166 Uniprot:J9P544
Length = 510
Score = 132 (51.5 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 31/103 (30%), Positives = 56/103 (54%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
+V G + +RV DV+ ++ + + H +++ +R L+V+ SKD S+ +W++ +
Sbjct: 261 IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLR---FSNGLMVTCSKDRSIAVWDMAS 317
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWS 203
I + GHR V VDF D Y +++ G D T+K+WS
Sbjct: 318 ATDITLRRVLVGHRAAVNVVDF--DDKYIVSASG-DRTIKVWS 357
Score = 58 (25.5 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 33/132 (25%), Positives = 55/132 (41%)
Query: 239 HSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKE-QSPGEGTADILQKYPVPECDIWFIKF 297
H + C ++ ++S S DN I LW+ + EG ++++ C I+F
Sbjct: 370 HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR------C----IRF 419
Query: 298 SCDFHYNAAAI-GNREGKIFVWELQSS--PPVLIARLS-HAQSKSPIRQTAMSYDGSTIL 353
N + G +GKI VW+LQ++ P + L + R + +D I+
Sbjct: 420 D-----NKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQII 474
Query: 354 SCCEDGAIWRWD 365
S D I WD
Sbjct: 475 SSSHDDTILIWD 486
>UNIPROTKB|B4DH70 [details] [associations]
symbol:FBXW11 "cDNA FLJ54601, highly similar to F-box/WD
repeat protein 11" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AC011410 HOGENOM:HOG000006638
HOVERGEN:HBG002521 OrthoDB:EOG4F1X2M UniGene:Hs.484138
HGNC:HGNC:13607 EMBL:AC011387 EMBL:AC113342 EMBL:AK294956
IPI:IPI01013614 SMR:B4DH70 STRING:B4DH70 Ensembl:ENST00000425623
UCSC:uc011dey.1 Uniprot:B4DH70
Length = 510
Score = 132 (51.5 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 31/103 (30%), Positives = 56/103 (54%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
+V G + +RV DV+ ++ + + H +++ +R L+V+ SKD S+ +W++ +
Sbjct: 261 IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLR---FSNGLMVTCSKDRSIAVWDMAS 317
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWS 203
I + GHR V VDF D Y +++ G D T+K+WS
Sbjct: 318 ATDITLRRVLVGHRAAVNVVDF--DDKYIVSASG-DRTIKVWS 357
Score = 58 (25.5 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 33/132 (25%), Positives = 55/132 (41%)
Query: 239 HSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKE-QSPGEGTADILQKYPVPECDIWFIKF 297
H + C ++ ++S S DN I LW+ + EG ++++ C I+F
Sbjct: 370 HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR------C----IRF 419
Query: 298 SCDFHYNAAAI-GNREGKIFVWELQSS--PPVLIARLS-HAQSKSPIRQTAMSYDGSTIL 353
N + G +GKI VW+LQ++ P + L + R + +D I+
Sbjct: 420 D-----NKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQII 474
Query: 354 SCCEDGAIWRWD 365
S D I WD
Sbjct: 475 SSSHDDTILIWD 486
>GENEDB_PFALCIPARUM|PF08_0019 [details] [associations]
symbol:PF08_0019 "receptor for activated C
kinase homolog, PfRACK" species:5833 "Plasmodium falciparum"
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISS] [GO:0005080 "protein kinase C binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 140 (54.3 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 35/111 (31%), Positives = 58/111 (52%)
Query: 96 DGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRL 155
DG+ F ++G + +R+ D+S + +SF+GH + + P +VSAS+D++++L
Sbjct: 83 DGL-FALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQ-IVSASRDKTIKL 140
Query: 156 WNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRI-ASCGMDNTVKIWSMK 205
WN C H + + V F PS I SCG D VK+W++K
Sbjct: 141 WNTLAQ-CKYTITDQQ-HTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLK 189
Score = 132 (51.5 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 35/98 (35%), Positives = 49/98 (50%)
Query: 122 KSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVD 181
KS GH +IN++ +S S D SVRLW++ G I F G H ++V SV
Sbjct: 66 KSLTGHSQAINDVSISS-DGLFALSGSWDHSVRLWDLSLGETIRSFIG---HTSDVFSVS 121
Query: 182 FHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTD 219
F P D +I S D T+K+W+ T + +T TD
Sbjct: 122 FSP-DNRQIVSASRDKTIKLWN-----TLAQCKYTITD 153
Score = 42 (19.8 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 17/74 (22%), Positives = 31/74 (41%)
Query: 251 DFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDI---WFIKFSCDFHYNAAA 307
D+ L + D I +W + K I + YPV + I W + +
Sbjct: 254 DYWLCAATDRFIRIWNLESK--------LIISEIYPVKQSKIGVPWCTSLTWSANGQLLY 305
Query: 308 IGNREGKIFVWELQ 321
G+ +G I+V+E++
Sbjct: 306 CGSTDGNIYVYEVK 319
Score = 42 (19.8 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 16/71 (22%), Positives = 23/71 (32%)
Query: 250 GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIG 309
G S D LW+ K + T + CD W + F I
Sbjct: 213 GSLCASGGKDGVAKLWDVKEGKHLYSLETGSTINSLCFSPCDYWLCAATDRF----IRIW 268
Query: 310 NREGKIFVWEL 320
N E K+ + E+
Sbjct: 269 NLESKLIISEI 279
Score = 38 (18.4 bits), Expect = 8.0e-07, Sum P(2) = 8.0e-07
Identities = 9/26 (34%), Positives = 12/26 (46%)
Query: 340 IRQTAMSYDGSTILSCCEDGAIWRWD 365
+ +S DGS S +DG WD
Sbjct: 204 LNTVTISPDGSLCASGGKDGVAKLWD 229
>UNIPROTKB|Q8IBA0 [details] [associations]
symbol:PfRACK "Receptor for activated C kinase homolog,
PfRACK" species:36329 "Plasmodium falciparum 3D7" [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 140 (54.3 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 35/111 (31%), Positives = 58/111 (52%)
Query: 96 DGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRL 155
DG+ F ++G + +R+ D+S + +SF+GH + + P +VSAS+D++++L
Sbjct: 83 DGL-FALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQ-IVSASRDKTIKL 140
Query: 156 WNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRI-ASCGMDNTVKIWSMK 205
WN C H + + V F PS I SCG D VK+W++K
Sbjct: 141 WNTLAQ-CKYTITDQQ-HTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLK 189
Score = 132 (51.5 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 35/98 (35%), Positives = 49/98 (50%)
Query: 122 KSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVD 181
KS GH +IN++ +S S D SVRLW++ G I F G H ++V SV
Sbjct: 66 KSLTGHSQAINDVSISS-DGLFALSGSWDHSVRLWDLSLGETIRSFIG---HTSDVFSVS 121
Query: 182 FHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTD 219
F P D +I S D T+K+W+ T + +T TD
Sbjct: 122 FSP-DNRQIVSASRDKTIKLWN-----TLAQCKYTITD 153
Score = 42 (19.8 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 17/74 (22%), Positives = 31/74 (41%)
Query: 251 DFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDI---WFIKFSCDFHYNAAA 307
D+ L + D I +W + K I + YPV + I W + +
Sbjct: 254 DYWLCAATDRFIRIWNLESK--------LIISEIYPVKQSKIGVPWCTSLTWSANGQLLY 305
Query: 308 IGNREGKIFVWELQ 321
G+ +G I+V+E++
Sbjct: 306 CGSTDGNIYVYEVK 319
Score = 42 (19.8 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 16/71 (22%), Positives = 23/71 (32%)
Query: 250 GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIG 309
G S D LW+ K + T + CD W + F I
Sbjct: 213 GSLCASGGKDGVAKLWDVKEGKHLYSLETGSTINSLCFSPCDYWLCAATDRF----IRIW 268
Query: 310 NREGKIFVWEL 320
N E K+ + E+
Sbjct: 269 NLESKLIISEI 279
Score = 38 (18.4 bits), Expect = 8.0e-07, Sum P(2) = 8.0e-07
Identities = 9/26 (34%), Positives = 12/26 (46%)
Query: 340 IRQTAMSYDGSTILSCCEDGAIWRWD 365
+ +S DGS S +DG WD
Sbjct: 204 LNTVTISPDGSLCASGGKDGVAKLWD 229
>UNIPROTKB|F1M373 [details] [associations]
symbol:Fbxw11 "Protein Fbxw11" species:10116 "Rattus
norvegicus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1309121 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 GO:GO:0045892
GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842
GO:GO:0045862 GO:GO:0000209 GO:GO:0031648 GO:GO:0042347
GO:GO:0031146 GO:GO:0042753 IPI:IPI00870648
Ensembl:ENSRNOT00000006078 ArrayExpress:F1M373 Uniprot:F1M373
Length = 527
Score = 132 (51.5 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 31/103 (30%), Positives = 56/103 (54%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
+V G + +RV DV+ ++ + + H +++ +R L+V+ SKD S+ +W++ +
Sbjct: 278 IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLR---FSNGLMVTCSKDRSIAVWDMAS 334
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWS 203
I + GHR V VDF D Y +++ G D T+K+WS
Sbjct: 335 ATDITLRRVLVGHRAAVNVVDF--DDKYIVSASG-DRTIKVWS 374
Score = 58 (25.5 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 33/132 (25%), Positives = 55/132 (41%)
Query: 239 HSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKE-QSPGEGTADILQKYPVPECDIWFIKF 297
H + C ++ ++S S DN I LW+ + EG ++++ C I+F
Sbjct: 387 HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR------C----IRF 436
Query: 298 SCDFHYNAAAI-GNREGKIFVWELQSS--PPVLIARLS-HAQSKSPIRQTAMSYDGSTIL 353
N + G +GKI VW+LQ++ P + L + R + +D I+
Sbjct: 437 D-----NKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQII 491
Query: 354 SCCEDGAIWRWD 365
S D I WD
Sbjct: 492 SSSHDDTILIWD 503
>ZFIN|ZDB-GENE-030131-6305 [details] [associations]
symbol:fbxw11a "F-box and WD-40 domain protein
11a" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-030131-6305 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
HSSP:Q9Y297 GeneTree:ENSGT00690000101849 EMBL:CABZ01001943
EMBL:CABZ01001944 EMBL:CABZ01001945 EMBL:CABZ01001946 EMBL:BC045356
IPI:IPI00502564 RefSeq:NP_958467.1 UniGene:Dr.78612 SMR:Q7ZVZ1
STRING:Q7ZVZ1 Ensembl:ENSDART00000036901 GeneID:334373
KEGG:dre:334373 CTD:334373 OMA:MESQINT NextBio:20810369
Uniprot:Q7ZVZ1
Length = 527
Score = 132 (51.5 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 32/103 (31%), Positives = 57/103 (55%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
+V G + +RV DVS+ ++ + + H +++ +R L+V+ SKD S+ +W++ +
Sbjct: 278 IVTGSSDSTVRVWDVSSGEVLNTLIHHNEAVLHLR---FCNGLMVTCSKDRSIAVWDMAS 334
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWS 203
I + GHR V VDF D Y +++ G D T+K+WS
Sbjct: 335 ATDISLRRVLVGHRAAVNVVDF--DDKYIVSASG-DRTIKVWS 374
Score = 58 (25.5 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 33/132 (25%), Positives = 55/132 (41%)
Query: 239 HSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKE-QSPGEGTADILQKYPVPECDIWFIKF 297
H + C ++ ++S S DN I LW+ + EG ++++ C I+F
Sbjct: 387 HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR------C----IRF 436
Query: 298 SCDFHYNAAAI-GNREGKIFVWELQSS--PPVLIARLS-HAQSKSPIRQTAMSYDGSTIL 353
N + G +GKI VW+LQ++ P + L + R + +D I+
Sbjct: 437 D-----NKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQII 491
Query: 354 SCCEDGAIWRWD 365
S D I WD
Sbjct: 492 SSSHDDTILIWD 503
>UNIPROTKB|E2RTE4 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:E2RTE4 Ensembl:ENSCAFT00000026749 Uniprot:E2RTE4
Length = 529
Score = 132 (51.5 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 31/103 (30%), Positives = 56/103 (54%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
+V G + +RV DV+ ++ + + H +++ +R L+V+ SKD S+ +W++ +
Sbjct: 280 IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLR---FSNGLMVTCSKDRSIAVWDMAS 336
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWS 203
I + GHR V VDF D Y +++ G D T+K+WS
Sbjct: 337 ATDITLRRVLVGHRAAVNVVDF--DDKYIVSASG-DRTIKVWS 376
Score = 58 (25.5 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 33/132 (25%), Positives = 55/132 (41%)
Query: 239 HSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKE-QSPGEGTADILQKYPVPECDIWFIKF 297
H + C ++ ++S S DN I LW+ + EG ++++ C I+F
Sbjct: 389 HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR------C----IRF 438
Query: 298 SCDFHYNAAAI-GNREGKIFVWELQSS--PPVLIARLS-HAQSKSPIRQTAMSYDGSTIL 353
N + G +GKI VW+LQ++ P + L + R + +D I+
Sbjct: 439 D-----NKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQII 493
Query: 354 SCCEDGAIWRWD 365
S D I WD
Sbjct: 494 SSSHDDTILIWD 505
>UNIPROTKB|F1MLG0 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045862 "positive
regulation of proteolysis" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0031648 "protein destabilization" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:DAAA02049882
EMBL:DAAA02049883 IPI:IPI00699126 Ensembl:ENSBTAT00000061118
Uniprot:F1MLG0
Length = 530
Score = 132 (51.5 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 31/103 (30%), Positives = 56/103 (54%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
+V G + +RV DV+ ++ + + H +++ +R L+V+ SKD S+ +W++ +
Sbjct: 281 IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLR---FSNGLMVTCSKDRSIAVWDMAS 337
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWS 203
I + GHR V VDF D Y +++ G D T+K+WS
Sbjct: 338 ATDITLRRVLVGHRAAVNVVDF--DDKYIVSASG-DRTIKVWS 377
Score = 58 (25.5 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 33/132 (25%), Positives = 55/132 (41%)
Query: 239 HSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKE-QSPGEGTADILQKYPVPECDIWFIKF 297
H + C ++ ++S S DN I LW+ + EG ++++ C I+F
Sbjct: 390 HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR------C----IRF 439
Query: 298 SCDFHYNAAAI-GNREGKIFVWELQSS--PPVLIARLS-HAQSKSPIRQTAMSYDGSTIL 353
N + G +GKI VW+LQ++ P + L + R + +D I+
Sbjct: 440 D-----NKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQII 494
Query: 354 SCCEDGAIWRWD 365
S D I WD
Sbjct: 495 SSSHDDTILIWD 506
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 136 (52.9 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 32/104 (30%), Positives = 56/104 (53%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
+VAG +G IRV D+ K+ ++ +GH +I + P V S S+D +++LW+++
Sbjct: 82 IVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYG-EFVASGSQDTNIKLWDIRR 140
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
C+ + G H V + F P + +AS D+TVK+W +
Sbjct: 141 KGCVFRYRG---HSQAVRCLRFSPDGKW-LASAADDHTVKLWDL 180
Score = 126 (49.4 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 32/142 (22%), Positives = 63/142 (44%)
Query: 64 QCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKS 123
+C + +AA++ V S + A L GG + + + ++ S
Sbjct: 7 RCAQAAAVAAVEEIVAHASNVSSLVLGKASG----RLLATGGDDCRVNLWSINKPNCIMS 62
Query: 124 FVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFH 183
GH + +R + L+V+ S+ S+R+W+++ I GH+ + S+DFH
Sbjct: 63 LTGHTSPVESVRLNTPE-ELIVAGSQSGSIRVWDLEAA---KILRTLMGHKANICSLDFH 118
Query: 184 PSDIYRIASCGMDNTVKIWSMK 205
P + +AS D +K+W ++
Sbjct: 119 PYGEF-VASGSQDTNIKLWDIR 139
>UNIPROTKB|F1PBF1 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 KO:K03362 GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AAEX03003014 RefSeq:XP_866627.1
ProteinModelPortal:F1PBF1 Ensembl:ENSCAFT00000026752 GeneID:479291
KEGG:cfa:479291 Uniprot:F1PBF1
Length = 542
Score = 132 (51.5 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 31/103 (30%), Positives = 56/103 (54%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
+V G + +RV DV+ ++ + + H +++ +R L+V+ SKD S+ +W++ +
Sbjct: 293 IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLR---FSNGLMVTCSKDRSIAVWDMAS 349
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWS 203
I + GHR V VDF D Y +++ G D T+K+WS
Sbjct: 350 ATDITLRRVLVGHRAAVNVVDF--DDKYIVSASG-DRTIKVWS 389
Score = 58 (25.5 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 33/132 (25%), Positives = 55/132 (41%)
Query: 239 HSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKE-QSPGEGTADILQKYPVPECDIWFIKF 297
H + C ++ ++S S DN I LW+ + EG ++++ C I+F
Sbjct: 402 HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR------C----IRF 451
Query: 298 SCDFHYNAAAI-GNREGKIFVWELQSS--PPVLIARLS-HAQSKSPIRQTAMSYDGSTIL 353
N + G +GKI VW+LQ++ P + L + R + +D I+
Sbjct: 452 D-----NKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQII 506
Query: 354 SCCEDGAIWRWD 365
S D I WD
Sbjct: 507 SSSHDDTILIWD 518
>UNIPROTKB|Q9UKB1 [details] [associations]
symbol:FBXW11 "F-box/WD repeat-containing protein 11"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=NAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA;NAS] [GO:0016567
"protein ubiquitination" evidence=IDA;NAS] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IDA] [GO:0006470 "protein
dephosphorylation" evidence=ISS] [GO:0042753 "positive regulation
of circadian rhythm" evidence=ISS] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0031648 "protein destabilization"
evidence=IMP] [GO:0045862 "positive regulation of proteolysis"
evidence=IMP] [GO:0005813 "centrosome" evidence=IDA] [GO:0005829
"cytosol" evidence=ISS;TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 Reactome:REACT_6900
GO:GO:0045892 GO:GO:0045893
Pathway_Interaction_DB:wnt_canonical_pathway
Pathway_Interaction_DB:ps1pathway GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862
Pathway_Interaction_DB:hedgehog_glipathway GO:GO:0000209
Pathway_Interaction_DB:hdac_classi_pathway
Pathway_Interaction_DB:nfkappabatypicalpathway
Pathway_Interaction_DB:nfkappabcanonicalpathway GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753 HOGENOM:HOG000006638
HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M EMBL:AF176022
EMBL:AB033279 EMBL:AB033280 EMBL:AB033281 EMBL:AB014596
EMBL:AK314999 EMBL:BC026213 IPI:IPI00301283 IPI:IPI00306671
IPI:IPI00328796 RefSeq:NP_036432.2 RefSeq:NP_387448.2
RefSeq:NP_387449.2 UniGene:Hs.484138 ProteinModelPortal:Q9UKB1
SMR:Q9UKB1 DIP:DIP-27593N IntAct:Q9UKB1 MINT:MINT-120522
STRING:Q9UKB1 PhosphoSite:Q9UKB1 DMDM:13124267 PRIDE:Q9UKB1
DNASU:23291 Ensembl:ENST00000265094 Ensembl:ENST00000296933
Ensembl:ENST00000393802 GeneID:23291 KEGG:hsa:23291 UCSC:uc003mbl.1
UCSC:uc003mbm.1 UCSC:uc003mbn.1 CTD:23291 GeneCards:GC05M171288
HGNC:HGNC:13607 MIM:605651 neXtProt:NX_Q9UKB1 PharmGKB:PA28050
InParanoid:Q9UKB1 OMA:FDQWSEA PhylomeDB:Q9UKB1
Pathway_Interaction_DB:nfkappabalternativepathway GenomeRNAi:23291
NextBio:45108 ArrayExpress:Q9UKB1 Bgee:Q9UKB1 CleanEx:HS_FBXW11
Genevestigator:Q9UKB1 GermOnline:ENSG00000072803 Uniprot:Q9UKB1
Length = 542
Score = 132 (51.5 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 31/103 (30%), Positives = 56/103 (54%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
+V G + +RV DV+ ++ + + H +++ +R L+V+ SKD S+ +W++ +
Sbjct: 293 IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLR---FSNGLMVTCSKDRSIAVWDMAS 349
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWS 203
I + GHR V VDF D Y +++ G D T+K+WS
Sbjct: 350 ATDITLRRVLVGHRAAVNVVDF--DDKYIVSASG-DRTIKVWS 389
Score = 58 (25.5 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 33/132 (25%), Positives = 55/132 (41%)
Query: 239 HSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKE-QSPGEGTADILQKYPVPECDIWFIKF 297
H + C ++ ++S S DN I LW+ + EG ++++ C I+F
Sbjct: 402 HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR------C----IRF 451
Query: 298 SCDFHYNAAAI-GNREGKIFVWELQSS--PPVLIARLS-HAQSKSPIRQTAMSYDGSTIL 353
N + G +GKI VW+LQ++ P + L + R + +D I+
Sbjct: 452 D-----NKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQII 506
Query: 354 SCCEDGAIWRWD 365
S D I WD
Sbjct: 507 SSSHDDTILIWD 518
>MGI|MGI:2144023 [details] [associations]
symbol:Fbxw11 "F-box and WD-40 domain protein 11"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=ISO;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006470
"protein dephosphorylation" evidence=IDA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO;IDA]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO;IMP] [GO:0031648 "protein
destabilization" evidence=ISO] [GO:0042347 "negative regulation of
NF-kappaB import into nucleus" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048511 "rhythmic process"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
MGI:MGI:2144023 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 EMBL:AL669951 GO:GO:0042753
EMBL:AL669844 HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362
OrthoDB:EOG4F1X2M GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AY038079 EMBL:AK041532 EMBL:AK149139 EMBL:AK152181
EMBL:AK160086 EMBL:AK166226 EMBL:AK168667 EMBL:BC034261
IPI:IPI00473301 IPI:IPI00474016 IPI:IPI00515142 IPI:IPI00969335
RefSeq:NP_001258276.1 RefSeq:NP_001258277.1 RefSeq:NP_001258278.1
RefSeq:NP_598776.1 UniGene:Mm.28017 UniGene:Mm.474118
ProteinModelPortal:Q5SRY7 SMR:Q5SRY7 DIP:DIP-59921N STRING:Q5SRY7
PhosphoSite:Q5SRY7 PRIDE:Q5SRY7 Ensembl:ENSMUST00000076383
Ensembl:ENSMUST00000093205 Ensembl:ENSMUST00000109366 GeneID:103583
KEGG:mmu:103583 UCSC:uc007ijx.1 UCSC:uc007ijy.1 UCSC:uc007ijz.1
UCSC:uc007ika.1 InParanoid:Q923H0 ChiTaRS:FBXW11 NextBio:356027
Bgee:Q5SRY7 Genevestigator:Q5SRY7 Uniprot:Q5SRY7
Length = 542
Score = 132 (51.5 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 31/103 (30%), Positives = 56/103 (54%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
+V G + +RV DV+ ++ + + H +++ +R L+V+ SKD S+ +W++ +
Sbjct: 293 IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLR---FSNGLMVTCSKDRSIAVWDMAS 349
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWS 203
I + GHR V VDF D Y +++ G D T+K+WS
Sbjct: 350 ATDITLRRVLVGHRAAVNVVDF--DDKYIVSASG-DRTIKVWS 389
Score = 58 (25.5 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 33/132 (25%), Positives = 55/132 (41%)
Query: 239 HSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKE-QSPGEGTADILQKYPVPECDIWFIKF 297
H + C ++ ++S S DN I LW+ + EG ++++ C I+F
Sbjct: 402 HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR------C----IRF 451
Query: 298 SCDFHYNAAAI-GNREGKIFVWELQSS--PPVLIARLS-HAQSKSPIRQTAMSYDGSTIL 353
N + G +GKI VW+LQ++ P + L + R + +D I+
Sbjct: 452 D-----NKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQII 506
Query: 354 SCCEDGAIWRWD 365
S D I WD
Sbjct: 507 SSSHDDTILIWD 518
>FB|FBgn0040207 [details] [associations]
symbol:kat80 "katanin 80" species:7227 "Drosophila
melanogaster" [GO:0008352 "katanin complex" evidence=ISS;NAS]
[GO:0051013 "microtubule severing" evidence=ISS;NAS] [GO:0007017
"microtubule-based process" evidence=ISS] [GO:0008017 "microtubule
binding" evidence=IEA;ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008017 GO:GO:0051013 HSSP:P16649
GO:GO:0008352 PANTHER:PTHR19845 FlyBase:FBgn0040207 EMBL:AF223065
ProteinModelPortal:Q9NHF0 PRIDE:Q9NHF0 InParanoid:Q9NHF0
ArrayExpress:Q9NHF0 Bgee:Q9NHF0 Uniprot:Q9NHF0
Length = 823
Score = 149 (57.5 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 38/102 (37%), Positives = 59/102 (57%)
Query: 108 GIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPS--LVVSASKDESVRLWNVQT-GICI 164
GIIR D++++K++ + GH + RT PS VVS S D +VRLW+VQ CI
Sbjct: 82 GIIRRWDLNSQKIYSTLNGH---MKSGRTLDFNPSGEYVVSGSNDTTVRLWDVQNENNCI 138
Query: 165 LIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKE 206
+ GH + V SV F P ++ IAS G++ ++ IW +++
Sbjct: 139 KV---CRGHMSHVNSVKFSPDGLW-IASAGLEGSILIWDIRK 176
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 136 (52.9 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 32/104 (30%), Positives = 56/104 (53%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
+VAG +G IRV D+ K+ ++ +GH +I + P V S S+D +++LW+++
Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYG-EFVASGSQDTNIKLWDIRR 136
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
C+ + G H V + F P + +AS D+TVK+W +
Sbjct: 137 KGCVFRYRG---HSQAVRCLRFSPDGKW-LASAADDHTVKLWDL 176
Score = 119 (46.9 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 26/105 (24%), Positives = 51/105 (48%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
L GG + + + ++ S GH + +R + L+V+ S+ S+R+W+++
Sbjct: 36 LATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPE-ELIVAGSQSGSIRVWDLEA 94
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
I GH+ + S+DFHP + +AS D +K+W ++
Sbjct: 95 A---KILRTLMGHKANICSLDFHPYGEF-VASGSQDTNIKLWDIR 135
>WB|WBGene00006481 [details] [associations]
symbol:plrg-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0040007 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0018996 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0040011 GO:GO:0000003 HSSP:P16649 EMBL:Z73970
GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK EMBL:Z74030
GeneID:179500 KEGG:cel:CELE_D1054.15 CTD:179500 PIR:T19550
RefSeq:NP_001256259.1 ProteinModelPortal:G5EEL2 SMR:G5EEL2
EnsemblMetazoa:D1054.15a WormBase:D1054.15a NextBio:905670
Uniprot:G5EEL2
Length = 494
Score = 146 (56.5 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 34/119 (28%), Positives = 63/119 (52%)
Query: 91 WACNVD---GIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSA 147
W VD G + +GG + II++ D+++ +L S GH S+ ++ P P L S
Sbjct: 186 WVRAVDVEPGNQWFASGGADRIIKIWDLASGQLKLSLTGHISSVRAVKVSPRHPFLF-SG 244
Query: 148 SKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPS-DIYRIASCGMDNTVKIWSMK 205
+D+ V+ W+++ I + G H + V ++ HPS D+ + +C D+T ++W M+
Sbjct: 245 GEDKQVKCWDLEYNKVIRHYHG---HLSAVQALSVHPSLDV--LVTCARDSTARVWDMR 298
Score = 116 (45.9 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 27/106 (25%), Positives = 55/106 (51%)
Query: 99 PFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 158
PFL +GG + ++ D+ K+ + + GH ++ + P ++V+ ++D + R+W++
Sbjct: 239 PFLFSGGEDKQVKCWDLEYNKVIRHYHGHLSAVQALSVHP-SLDVLVTCARDSTARVWDM 297
Query: 159 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
+T + FAG H N V V D ++ + D TV++W +
Sbjct: 298 RTKAQVHCFAG---HTNTVADVVCQSVDP-QVITASHDATVRLWDL 339
Score = 41 (19.5 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 8/35 (22%), Positives = 17/35 (48%)
Query: 331 LSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWD 365
+ + + I T S D ++S ++G++ WD
Sbjct: 386 MQNLSGHNAIINTLSSNDDGVVVSGADNGSLCFWD 420
>TAIR|locus:2012971 [details] [associations]
symbol:AT1G71840 "AT1G71840" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0005829 "cytosol" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684 GO:GO:0005829
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 HOGENOM:HOG000261676 OMA:VWSFEVG HSSP:P16649
EMBL:AY080732 EMBL:BT001964 IPI:IPI00538190 RefSeq:NP_177329.2
UniGene:At.44000 ProteinModelPortal:Q8RXQ4 SMR:Q8RXQ4 IntAct:Q8RXQ4
PRIDE:Q8RXQ4 EnsemblPlants:AT1G71840.1 GeneID:843514
KEGG:ath:AT1G71840 TAIR:At1g71840 InParanoid:Q8RXQ4
PhylomeDB:Q8RXQ4 ProtClustDB:CLSN2680639 ArrayExpress:Q8RXQ4
Genevestigator:Q8RXQ4 Uniprot:Q8RXQ4
Length = 407
Score = 118 (46.6 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 47/176 (26%), Positives = 85/176 (48%)
Query: 33 KRPLYAVVFNFIDSRYFNVFATVGGN-RVTVYQCLEGGVIAALQSYVDEDKEESFYTVSW 91
K LYA+ + D+ + AT GG+ + +++ G A L + D +VS
Sbjct: 70 KGELYALACSPTDA---TLVATGGGDDKAFLWKIGNGDWAAELPGHKD--------SVSC 118
Query: 92 -ACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKD 150
A + DG L +GG++G++++ D S+ L G G I +R P + +V++ S+D
Sbjct: 119 LAFSYDG-QLLASGGLDGVVQIFDASSGTLKCVLDGPGAGIEWVRWHP-RGHIVLAGSED 176
Query: 151 ESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDN-TVKIWSMK 205
S+ +WN + +F+G H V DF P ++ G D+ ++ +W+ K
Sbjct: 177 CSLWMWNADKEAYLNMFSG---HNLNVTCGDFTPDG--KLICTGSDDASLIVWNPK 227
Score = 85 (35.0 bits), Expect = 0.00021, Sum P(3) = 0.00021
Identities = 24/89 (26%), Positives = 42/89 (47%)
Query: 114 DVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGH 173
D +++ +H +F GH + + P +LV + D+ LW + G A GH
Sbjct: 57 DENDDSVH-TFTGHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWA---AELPGH 112
Query: 174 RNEVLSVDFHPSDIYRIASCGMDNTVKIW 202
++ V + F D +AS G+D V+I+
Sbjct: 113 KDSVSCLAFS-YDGQLLASGGLDGVVQIF 140
Score = 69 (29.3 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 17/64 (26%), Positives = 34/64 (53%)
Query: 306 AAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGST--ILSCCEDGAIWR 363
AA G + K+ +W+LQ S P I H + T++++ G++ + + C +G +
Sbjct: 302 AATGGMDKKLIIWDLQHSTPRFICE--HEEGV-----TSLTWIGTSKYLATGCANGTVSI 354
Query: 364 WDAI 367
WD++
Sbjct: 355 WDSL 358
Score = 46 (21.3 bits), Expect = 0.00021, Sum P(3) = 0.00021
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 237 SVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKE 271
S H+ V C + G I + S D +++W PK E
Sbjct: 194 SGHNLNVTCGDFTPDGKLICTGSDDASLIVWNPKTCE 230
Score = 41 (19.5 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 9/16 (56%), Positives = 12/16 (75%)
Query: 251 DFILSKSVDNEIVLWE 266
DFI+S SVDN ++E
Sbjct: 383 DFIVSVSVDNTARVFE 398
>ASPGD|ASPL0000055088 [details] [associations]
symbol:AN10058 species:162425 "Emericella nidulans"
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 HOGENOM:HOG000091641 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 ProteinModelPortal:C8VTS6
EnsemblFungi:CADANIAT00002342 Uniprot:C8VTS6
Length = 518
Score = 140 (54.3 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 36/98 (36%), Positives = 52/98 (53%)
Query: 109 IIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFA 168
I RV VS + S GHG++I P+ S +VS S D + R+W+ TG +
Sbjct: 131 IFRVKAVS--RCSASIAGHGEAILATSFSPVSSSTMVSGSGDSTARIWDCDTGTPLHTLK 188
Query: 169 GAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKE 206
G H + VL+V + P+ IA+ MDNTV+IW K+
Sbjct: 189 G---HTSWVLAVSYSPNGAM-IATGSMDNTVRIWDAKK 222
Score = 122 (48.0 bits), Expect = 0.00019, P = 0.00019
Identities = 28/103 (27%), Positives = 57/103 (55%)
Query: 100 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 159
++ + G + +++ + + K + GH ++ + L+VS+SKD ++++WNV+
Sbjct: 419 YIASAGFDNHVKLWNGRDGKFITTLRGHVGAVYQCCFSA-DSRLLVSSSKDTTLKVWNVR 477
Query: 160 TGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIW 202
TG + GH++EV +VD+ P D ++ S G D ++IW
Sbjct: 478 TG---KLSEDLPGHKDEVFAVDWSP-DGQKVGSGGKDKAIRIW 516
Score = 48 (22.0 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 25/120 (20%), Positives = 51/120 (42%)
Query: 246 NRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNA 305
N + + ++S S D + LW+P +S + A +L + ++ + FS D Y A
Sbjct: 370 NNKIVEKLVSASDDFTMYLWDP----ESSSKPVARLLGH----QKEVNHVTFSPDMAYIA 421
Query: 306 AAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWD 365
+A + + +W + + R H + + Q S D ++S +D + W+
Sbjct: 422 SA--GFDNHVKLWNGRDGKFITTLR-GHVGA---VYQCCFSADSRLLVSSSKDTTLKVWN 475
Score = 47 (21.6 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 12/32 (37%), Positives = 15/32 (46%)
Query: 235 IASVHSNYVDCNRWLGDF-ILSKSVDNEIVLW 265
+ S H V C RW G I + S D I +W
Sbjct: 277 VLSGHKGSVTCVRWGGTGKIYTSSHDRTIKVW 308
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 129 (50.5 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 31/104 (29%), Positives = 54/104 (51%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
LV+G + +++ D + +L ++ GH ++ + P L+ S S D ++ LW+ T
Sbjct: 765 LVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSP-DGKLLASGSYDNTIDLWDSAT 823
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
G + F G H + + SV F P D +AS D+T+KIW +
Sbjct: 824 GELLQTFEG---HPHSIWSVAFAP-DGKELASASDDSTIKIWDL 863
Score = 122 (48.0 bits), Expect = 0.00063, P = 0.00063
Identities = 37/113 (32%), Positives = 56/113 (49%)
Query: 90 SWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASK 149
S A + DG L +G + I++ D + +L ++ GH D I + P L+ S S
Sbjct: 1133 SVAFSPDGKQ-LASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSP-DGKLLASGSY 1190
Query: 150 DESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIW 202
D++ +LW+ TG + IF G H V SV F P D +AS T+K+W
Sbjct: 1191 DQTAKLWDPATGELLQIFEG---HSKWVESVAFSP-DGKLLASSSYGETIKLW 1239
Score = 120 (47.3 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 38/130 (29%), Positives = 65/130 (50%)
Query: 74 LQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINE 133
LQ++ E S ++V++A DG L + + I++ D++ +L ++ H S+
Sbjct: 827 LQTF--EGHPHSIWSVAFA--PDGKE-LASASDDSTIKIWDLATGELQQTLDSHSQSVRS 881
Query: 134 IRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASC 193
+ P L+ S+S D ++++WN TG G G V SV F P D ++AS
Sbjct: 882 VAFSP-DGKLLASSSLDSTIKVWNPATGELQQSLEGRSGW---VKSVAFSP-DGKKLASG 936
Query: 194 GMDNTVKIWS 203
NTVK+W+
Sbjct: 937 SEKNTVKLWN 946
Score = 112 (44.5 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 34/120 (28%), Positives = 57/120 (47%)
Query: 85 SFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLV 144
S + S A + DG L +G +++ + + +L ++ GH S+ + P L
Sbjct: 918 SGWVKSVAFSPDGKK-LASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLA 976
Query: 145 VSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
S+S D +++LWN TG F G H + +V F P D + S DNT+K+W +
Sbjct: 977 -SSSSDTTIKLWNSTTGELQQTFKG---HDLWIRAVAFSP-DGKHLVSGSDDNTIKLWDL 1031
Score = 70 (29.7 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 30/118 (25%), Positives = 50/118 (42%)
Query: 250 GDFILSKSVDNEIVLWEPKMKE-QSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAI 308
G + S S+D+ I +W P E Q EG + ++ + FS D A
Sbjct: 888 GKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKS----------VAFSPDG--KKLAS 935
Query: 309 GNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDA 366
G+ + + +W ++ +L H+QS +R A S DG + S D I W++
Sbjct: 936 GSEKNTVKLWN-PATGELLQTLEGHSQS---VRSVAFSPDGKQLASSSSDTTIKLWNS 989
Score = 58 (25.5 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 30/119 (25%), Positives = 50/119 (42%)
Query: 250 GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIG 309
G ++S S DN I LW+ T+++ Q + + FS D A++
Sbjct: 1014 GKHLVSGSDDNTIKLWDL---------ATSELQQSLEDHSRSVHAVAFSPDDKQLASS-- 1062
Query: 310 NREGKIFVWELQSSPPVLIARLS-HAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAI 367
+ + I +W+ S+ L L H+Q +R S DG + S DG I W+ +
Sbjct: 1063 SLDSTIKLWD--SATGELQRTLEGHSQG---VRSVTFSPDGKLLASNSYDGTIKLWNPL 1116
Score = 50 (22.7 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 340 IRQTAMSYDGSTILSCCEDGAIWRWD 365
IR A S DG ++S +D I WD
Sbjct: 1005 IRAVAFSPDGKHLVSGSDDNTIKLWD 1030
Score = 40 (19.1 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 239 HSNYVDCNRWL--GDFILSKSVDNEIVLWEP 267
HS +V+ + G + S S I LW+P
Sbjct: 1211 HSKWVESVAFSPDGKLLASSSYGETIKLWDP 1241
Score = 39 (18.8 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 30/117 (25%), Positives = 48/117 (41%)
Query: 253 ILSKSVDNEIVLWEPKMKE-QSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNR 311
+ S S+D+ I LW+ E Q EG + ++ + FS D A+ +
Sbjct: 1059 LASSSLDSTIKLWDSATGELQRTLEGHSQGVRS----------VTFSPDGKLLAS--NSY 1106
Query: 312 EGKIFVWELQSSPPVLIARLSHAQS-KSP-IRQTAMSYDGSTILSCCEDGAIWRWDA 366
+G I +W +P L L + +S + A S DG + S D I WD+
Sbjct: 1107 DGTIKLW----NP--LTGELQQTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDS 1157
Score = 38 (18.4 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 8/22 (36%), Positives = 10/22 (45%)
Query: 250 GDFILSKSVDNEIVLWEPKMKE 271
G + S S D LW+P E
Sbjct: 1182 GKLLASGSYDQTAKLWDPATGE 1203
>UNIPROTKB|E1BDF6 [details] [associations]
symbol:E1BDF6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046784 "intronless viral mRNA export from host
nucleus" evidence=IEA] [GO:0000346 "transcription export complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000346 GO:GO:0046784
GeneTree:ENSGT00700000104559 IPI:IPI00732803 OMA:LAYACDD
EMBL:DAAA02027701 EMBL:DAAA02027702 EMBL:DAAA02027703
ProteinModelPortal:E1BDF6 Ensembl:ENSBTAT00000049661 Uniprot:E1BDF6
Length = 351
Score = 131 (51.2 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 28/80 (35%), Positives = 50/80 (62%)
Query: 87 YTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHK--SFVGHGDSINEIRTQPLKPSLV 144
++V+W+C DG L +G + V + ++L K ++ GHGDS++++ P P L
Sbjct: 59 HSVAWSC--DGRR-LASGSFDKTASVFLLEKDRLVKENNYRGHGDSVDQLCWHPSNPDLF 115
Query: 145 VSASKDESVRLWNVQTGICI 164
V+AS D+++R+W+V+T CI
Sbjct: 116 VTASGDKTIRIWDVRTTKCI 135
Score = 52 (23.4 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 12/52 (23%), Positives = 25/52 (48%)
Query: 307 AIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCED 358
A G+ + + +W++ L+ ++ P+R + S+DG + S ED
Sbjct: 240 ATGSADALVSLWDVDE----LVCVRCFSRLDWPVRTLSFSHDGKMLASASED 287
>UNIPROTKB|O42249 [details] [associations]
symbol:gnb2l1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:8128 "Oreochromis niloticus" [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0030178 GO:GO:2000114
GO:GO:0051302 GO:GO:2000543 HOVERGEN:HBG000277 EMBL:AF025331
UniGene:Oni.25 ProteinModelPortal:O42249 SMR:O42249 PRIDE:O42249
Uniprot:O42249
Length = 317
Score = 138 (53.6 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 36/124 (29%), Positives = 59/124 (47%)
Query: 82 KEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKP 141
K S + + DG F ++G +G +R+ D++ + FVGH + +
Sbjct: 60 KGHSHFVSDVVISSDG-QFALSGAWDGTLRLWDLTTGLTTRRFVGHTKDVLSVAFSADNR 118
Query: 142 SLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRI-ASCGMDNTVK 200
+VS S+D++++LWN G+C G H V V F P+ I SCG D VK
Sbjct: 119 Q-IVSGSRDKTIKLWNT-LGVCKYTIQDEG-HTEWVSCVRFSPNSSNPIIVSCGWDKMVK 175
Query: 201 IWSM 204
+W++
Sbjct: 176 VWNL 179
Score = 42 (19.8 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 13/49 (26%), Positives = 19/49 (38%)
Query: 317 VWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWD 365
VW L + + +H + +S DGS S +DG WD
Sbjct: 176 VWNLANCK----LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWD 220
>TAIR|locus:2202129 [details] [associations]
symbol:AT1G11160 "AT1G11160" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0080008 GO:GO:0008352 PANTHER:PTHR19845 IPI:IPI00528177
RefSeq:NP_172582.2 UniGene:At.43445 ProteinModelPortal:F4I7E1
SMR:F4I7E1 PRIDE:F4I7E1 EnsemblPlants:AT1G11160.1 GeneID:837657
KEGG:ath:AT1G11160 OMA:DETHATQ Uniprot:F4I7E1
Length = 1021
Score = 149 (57.5 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 32/115 (27%), Positives = 62/115 (53%)
Query: 90 SWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASK 149
S A N + + ++AG +G+I++ D+ K+ ++F GH + + + P L S S
Sbjct: 63 SVAFNSEEV-LVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLA-SGSS 120
Query: 150 DESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
D ++R+W+ + CI + G H + +++F P + + S G+DN VK+W +
Sbjct: 121 DTNLRVWDTRKKGCIQTYKG---HTRGISTIEFSPDGRW-VVSGGLDNVVKVWDL 171
Score = 124 (48.7 bits), Expect = 0.00027, P = 0.00027
Identities = 32/108 (29%), Positives = 53/108 (49%)
Query: 100 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 159
FL +G + +RV D + +++ GH I+ I P VVS D V++W++
Sbjct: 114 FLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSP-DGRWVVSGGLDNVVKVWDLT 172
Query: 160 TGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEF 207
G + F H + S+DFHP + + +A+ D TVK W ++ F
Sbjct: 173 AGKLLHEFKC---HEGPIRSLDFHPLE-FLLATGSADRTVKFWDLETF 216
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 138 (53.6 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 39/107 (36%), Positives = 54/107 (50%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPS--LVVSASKDESVRLWNV 158
LV + I+V V +K S H IN +R P L+ SAS D++V+LW+
Sbjct: 119 LVTASDDKTIKVWTVHRQKFLFSLSQH---INWVRCARFSPDGRLIASASDDKTVKLWDK 175
Query: 159 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
+ CI F GG N V +FHPS IA+ G D TVK+W ++
Sbjct: 176 TSRECIHSFCEHGGFANHV---EFHPSGTC-IAAAGTDKTVKVWDVR 218
Score = 114 (45.2 bits), Expect = 0.00065, P = 0.00065
Identities = 51/174 (29%), Positives = 76/174 (43%)
Query: 120 LHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLS 179
L + F GH D+I + K L S S D +++W+++ + G H++ V+
Sbjct: 12 LERHFRGHRDAITSVDFSLNKKQLA-SGSMDSCLKIWSMKPQMRAYCLVG---HKDAVMC 67
Query: 180 VDFHPSDIYRIASCGMDNTVKIW--SMKEFWTYVEKSFTWT------------------D 219
V F PS + +AS D TV +W S+K T V K+ T T D
Sbjct: 68 VQFSPSG-HLVASGSRDKTVCLWVPSVKGEST-VFKAHTATVRSVHFSSDGQSLVTASDD 125
Query: 220 LPSKFPTKYVQFPVFIASVHSNYVDCNRWLGD--FILSKSVDNEIVLWEPKMKE 271
K T + Q +F S H N+V C R+ D I S S D + LW+ +E
Sbjct: 126 KTIKVWTVHRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSRE 179
Score = 42 (19.8 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 6/17 (35%), Positives = 11/17 (64%)
Query: 250 GDFILSKSVDNEIVLWE 266
GDF S D ++++W+
Sbjct: 284 GDFFASGGSDEQVMVWK 300
>ASPGD|ASPL0000006005 [details] [associations]
symbol:AN5972 species:162425 "Emericella nidulans"
[GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0043130
"ubiquitin binding" evidence=IEA] [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0032511 "late endosome to vacuole
transport via multivesicular body sorting pathway" evidence=IEA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011044 SUPFAM:SSF50969 HOGENOM:HOG000163444
InterPro:IPR016453 PIRSF:PIRSF005567 OMA:LRNKAFG
ProteinModelPortal:C8V3C4 EnsemblFungi:CADANIAT00007048
Uniprot:C8V3C4
Length = 853
Score = 148 (57.2 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 33/106 (31%), Positives = 58/106 (54%)
Query: 100 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 159
++V G + +R+ + + + SF H D I I P +P V++AS D +++LW+ +
Sbjct: 69 WIVCGSDDFQLRIYNYNTSEKIASFEAHPDYIRSIAVHPTQP-FVLTASDDMTIKLWDWE 127
Query: 160 TGI-CILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
G C+ ++ G H + V+ + +P D AS +D TVKIWS+
Sbjct: 128 KGWKCVQVYEG---HSHYVMGLAINPKDTNTFASACLDRTVKIWSL 170
>ZFIN|ZDB-GENE-030131-8101 [details] [associations]
symbol:wdr37 "WD repeat domain 37" species:7955
"Danio rerio" [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-8101
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00640000091456 CTD:22884 EMBL:AL954666 EMBL:CT583671
IPI:IPI00900634 RefSeq:NP_001161736.1 UniGene:Dr.106574
Ensembl:ENSDART00000111491 Ensembl:ENSDART00000134598 GeneID:558075
KEGG:dre:558075 NextBio:20882300 Uniprot:E7FEE4
Length = 494
Score = 146 (56.5 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 30/84 (35%), Positives = 49/84 (58%)
Query: 119 KLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVL 178
+L K +VGH D I ++ ++P ++ +AS D LW+++TG C+L +AG H V
Sbjct: 147 QLVKEYVGHRDGIWDLAVTRVQPLVLGTASADHCSMLWSIETGKCLLKYAG---HAGSVN 203
Query: 179 SVDFHPSDIYRIASCGMDNTVKIW 202
S+ FHP++ + + G D T IW
Sbjct: 204 SIKFHPTEQMALTASG-DQTAHIW 226
Score = 40 (19.1 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 249 LGDFILSKSVDNEIVLWEPKMKEQSP 274
+GD ++S S D + +W+ K +SP
Sbjct: 377 VGDNVVSGSDDRTVKVWDLK-NMRSP 401
>FB|FBgn0025724 [details] [associations]
symbol:beta'Cop "beta'-coatomer protein" species:7227
"Drosophila melanogaster" [GO:0006890 "retrograde vesicle-mediated
transport, Golgi to ER" evidence=NAS] [GO:0030126 "COPI vesicle
coat" evidence=NAS] [GO:0048194 "Golgi vesicle budding"
evidence=NAS] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=NAS] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0010883
"regulation of lipid storage" evidence=IDA] [GO:0005795 "Golgi
stack" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006888 GO:GO:0030126 GO:GO:0010883 GO:GO:0006890
InterPro:IPR011044 SUPFAM:SSF50969 InterPro:IPR016453
PIRSF:PIRSF005567 GeneTree:ENSGT00640000091529 OMA:LRNKAFG
EMBL:AJ006523 EMBL:AJ006524 EMBL:BT023906 EMBL:AY119527
RefSeq:NP_524836.2 UniGene:Dm.2980 ProteinModelPortal:O62621
SMR:O62621 DIP:DIP-22262N MINT:MINT-1636818 STRING:O62621
PaxDb:O62621 PRIDE:O62621 EnsemblMetazoa:FBtr0080469 GeneID:45757
KEGG:dme:Dmel_CG6699 CTD:45757 FlyBase:FBgn0025724
InParanoid:O62621 OrthoDB:EOG4VHHN9 PhylomeDB:O62621
ChiTaRS:beta'Cop GenomeRNAi:45757 NextBio:838315 Bgee:O62621
GermOnline:CG6699 Uniprot:O62621
Length = 914
Score = 148 (57.2 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 36/107 (33%), Positives = 59/107 (55%)
Query: 100 FLVAGGINGIIRVIDVSN-EKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 158
+++ G + IRV + + EK+H SF H D + I P +P LV+++S D ++LWN
Sbjct: 71 WILTGSDDMQIRVFNYNTLEKVH-SFEAHSDYLRCIAVHPTQP-LVLTSSDDMLIKLWNW 128
Query: 159 QT-GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
+ C +F G H + V+ + F+P D AS +D TVK+W +
Sbjct: 129 EKMWACQRVFEG---HTHYVMQIVFNPKDNNTFASASLDRTVKVWQL 172
>TAIR|locus:2036823 [details] [associations]
symbol:AT1G62020 species:3702 "Arabidopsis thaliana"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005215 "transporter activity" evidence=ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=ISS] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0030244 "cellulose biosynthetic
process" evidence=RCA] [GO:0048193 "Golgi vesicle transport"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005886 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030126 EMBL:AC004392 EMBL:AY050400
EMBL:BT001048 IPI:IPI00528095 PIR:T02146 RefSeq:NP_176393.1
UniGene:At.48329 ProteinModelPortal:Q94A40 SMR:Q94A40 IntAct:Q94A40
STRING:Q94A40 PaxDb:Q94A40 PRIDE:Q94A40 EnsemblPlants:AT1G62020.1
GeneID:842497 KEGG:ath:AT1G62020 GeneFarm:2989 TAIR:At1g62020
HOGENOM:HOG000195913 InParanoid:Q94A40 KO:K05236 OMA:PLAADHI
PhylomeDB:Q94A40 ProtClustDB:CLSN2914500 Genevestigator:Q94A40
InterPro:IPR016391 PIRSF:PIRSF003354 Uniprot:Q94A40
Length = 1216
Score = 157 (60.3 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 33/106 (31%), Positives = 58/106 (54%)
Query: 99 PFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 158
P V+GG + I+V + N + + +GH D I ++ P +VSAS D+++R+WN
Sbjct: 64 PLFVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYP-WIVSASDDQTIRIWNW 122
Query: 159 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
Q+ C+ + G H + V+ FHP + + S +D TV++W +
Sbjct: 123 QSRTCVSVLTG---HNHYVMCASFHPKEDL-VVSASLDQTVRVWDI 164
Score = 38 (18.4 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 251 DFILSKSVDNEIVLWE 266
D I+S S D I +W+
Sbjct: 261 DIIVSNSEDKSIRVWD 276
>DICTYBASE|DDB_G0287635 [details] [associations]
symbol:prpf4 "pre-mRNA processing factor 4"
species:44689 "Dictyostelium discoideum" [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287635
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR EMBL:AAFI02000103 GO:GO:0000398
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0046540
InterPro:IPR014906 Pfam:PF08799 KO:K12662 OMA:CIATVSH
RefSeq:XP_637144.1 ProteinModelPortal:Q54K20 STRING:Q54K20
EnsemblProtists:DDB0233058 GeneID:8626239 KEGG:ddi:DDB_G0287635
InParanoid:Q54K20 ProtClustDB:CLSZ2497485 Uniprot:Q54K20
Length = 600
Score = 145 (56.1 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 42/142 (29%), Positives = 71/142 (50%)
Query: 126 GHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPS 185
GH D + I Q SL+ + S+D VR+W++++G IL F G H +V+SVD+ P+
Sbjct: 428 GHSDGVMGISIQS-DGSLLATGSQDGLVRIWDLRSGRPILYFQG---HSKQVISVDWSPN 483
Query: 186 DIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDC 245
Y++AS DNTV IW +++ K + L V+F ++N +
Sbjct: 484 G-YQLASSSEDNTVVIWDIRK------KEQSCQILAHNSIVSCVKFQKQSTQTNNNNNNS 536
Query: 246 NRWLGDFILSKSVDNEIVLWEP 267
+ +++ + S D +I W P
Sbjct: 537 SPGCVNYLATCSFDGKIKTWSP 558
Score = 100 (40.3 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 25/84 (29%), Positives = 43/84 (51%)
Query: 123 SFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTG-ICILIFAGAGGHRNEVLSVD 181
S GH D +N P + ++S D+S RLW++++G C+L GH + V+ +
Sbjct: 382 SLEGHSDVVNRCSFHPCG-RYITTSSNDKSWRLWDLESGGKCLL---DQEGHSDGVMGIS 437
Query: 182 FHPSDIYRIASCGMDNTVKIWSMK 205
SD +A+ D V+IW ++
Sbjct: 438 IQ-SDGSLLATGSQDGLVRIWDLR 460
Score = 65 (27.9 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 16/44 (36%), Positives = 22/44 (50%)
Query: 232 PVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQS 273
P+ HS V W G + S S DN +V+W+ + KEQS
Sbjct: 464 PILYFQGHSKQVISVDWSPNGYQLASSSEDNTVVIWDIRKKEQS 507
>MGI|MGI:1920393 [details] [associations]
symbol:Wdr37 "WD repeat domain 37" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1920393 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00640000091456
EMBL:AK129254 EMBL:AK032582 EMBL:AK036203 EMBL:BC046236
IPI:IPI00387421 RefSeq:NP_001034477.1 RefSeq:NP_766033.1
UniGene:Mm.284654 ProteinModelPortal:Q8CBE3 SMR:Q8CBE3
IntAct:Q8CBE3 STRING:Q8CBE3 PhosphoSite:Q8CBE3 PaxDb:Q8CBE3
PRIDE:Q8CBE3 Ensembl:ENSMUST00000021572 Ensembl:ENSMUST00000054251
GeneID:207615 KEGG:mmu:207615 UCSC:uc007pki.1 CTD:22884
HOGENOM:HOG000013185 HOVERGEN:HBG057072 InParanoid:Q8CBE3
OMA:TGLPRDM OrthoDB:EOG4DZ1V5 NextBio:371979 Bgee:Q8CBE3
CleanEx:MM_WDR37 Genevestigator:Q8CBE3
GermOnline:ENSMUSG00000021147 Uniprot:Q8CBE3
Length = 496
Score = 145 (56.1 bits), Expect = 6.8e-07, Sum P(2) = 6.8e-07
Identities = 29/84 (34%), Positives = 49/84 (58%)
Query: 119 KLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVL 178
+L K ++GH D I ++ +P ++ +AS D + LW+++TG C++ +AG H V
Sbjct: 147 QLVKEYIGHRDGIWDVSVTRTQPIVLGTASADHTALLWSIETGKCLVKYAG---HVGSVN 203
Query: 179 SVDFHPSDIYRIASCGMDNTVKIW 202
S+ FHPS+ + + G D T IW
Sbjct: 204 SIKFHPSEQLALTASG-DQTAHIW 226
Score = 40 (19.1 bits), Expect = 6.8e-07, Sum P(2) = 6.8e-07
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 249 LGDFILSKSVDNEIVLWEPKMKEQSP 274
+GD ++S S D + +W+ K +SP
Sbjct: 379 VGDNVVSGSDDRTVKVWDLK-NMRSP 403
>UNIPROTKB|Q8N0X2 [details] [associations]
symbol:SPAG16 "Sperm-associated antigen 16 protein"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0035085 "cilium axoneme" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086 EMBL:AF310672
EMBL:AF426740 EMBL:AF490390 EMBL:AK026377 EMBL:AK095036
EMBL:CR457359 EMBL:CR749477 EMBL:AL832962 EMBL:BC009614
EMBL:BC067756 EMBL:BC100282 IPI:IPI00166103 IPI:IPI00396021
IPI:IPI00470876 IPI:IPI00556122 IPI:IPI00556405
RefSeq:NP_001020607.1 RefSeq:NP_078808.3 UniGene:Hs.602792
ProteinModelPortal:Q8N0X2 SMR:Q8N0X2 IntAct:Q8N0X2 STRING:Q8N0X2
PhosphoSite:Q8N0X2 DMDM:146329993 PRIDE:Q8N0X2
Ensembl:ENST00000272898 Ensembl:ENST00000331683
Ensembl:ENST00000413312 Ensembl:ENST00000432529 GeneID:79582
KEGG:hsa:79582 UCSC:uc002veo.3 UCSC:uc002veq.3 UCSC:uc002ves.1
UCSC:uc010fuz.2 CTD:79582 GeneCards:GC02P214149 H-InvDB:HIX0021055
HGNC:HGNC:23225 HPA:HPA037542 MIM:612173 neXtProt:NX_Q8N0X2
PharmGKB:PA134887898 HOVERGEN:HBG086482 InParanoid:Q8N0X2
OMA:EGHNHAV OrthoDB:EOG41ZF9F PhylomeDB:Q8N0X2 GenomeRNAi:79582
NextBio:68570 ArrayExpress:Q8N0X2 Bgee:Q8N0X2 CleanEx:HS_SPAG16
Genevestigator:Q8N0X2 GermOnline:ENSG00000144451 Uniprot:Q8N0X2
Length = 631
Score = 143 (55.4 bits), Expect = 7.2e-07, Sum P(2) = 7.2e-07
Identities = 32/117 (27%), Positives = 58/117 (49%)
Query: 91 WACNVDGIP-FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASK 149
W+C F+ + ++ ++ DV++E+ + GH DS+N I P +L+ S S
Sbjct: 440 WSCTWHSCGNFVASSSLDKTSKIWDVNSERCRCTLYGHTDSVNSIEFFPFSNTLLTS-SA 498
Query: 150 DESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKE 206
D+++ +W+ +TGIC GH + + F P + IASC K+W ++
Sbjct: 499 DKTLSIWDARTGICE---QSLYGHMHSINDAIFDPRG-HMIASCDACGVTKLWDFRK 551
Score = 45 (20.9 bits), Expect = 7.2e-07, Sum P(2) = 7.2e-07
Identities = 18/70 (25%), Positives = 30/70 (42%)
Query: 295 IKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILS 354
+ F A A GN G I + +L+S I +L ++++ S+DG + S
Sbjct: 568 VNFDSSGRVLAQASGN--GVIHLLDLKSGE---IHKLMGHENEA--HTVVFSHDGEILFS 620
Query: 355 CCEDGAIWRW 364
DG + W
Sbjct: 621 GGSDGTVRTW 630
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 141 (54.7 bits), Expect = 9.6e-07, P = 9.6e-07
Identities = 41/115 (35%), Positives = 59/115 (51%)
Query: 93 CNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPS--LVVSASKD 150
C+ DG LV + ++V +K S H IN +R P L+VSAS D
Sbjct: 112 CS-DG-QSLVTASDDKTVKVWSTHRQKFLFSLSQH---INWVRCARFSPDGRLIVSASDD 166
Query: 151 ESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
++V+LW+ + C+ + GG V VDFHPS IA+ MDNTVK+W ++
Sbjct: 167 KTVKLWDKTSRECVHSYCEHGGF---VTYVDFHPSGTC-IAAASMDNTVKVWDVR 217
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 125 (49.1 bits), Expect = 9.7e-07, Sum P(2) = 9.7e-07
Identities = 34/102 (33%), Positives = 54/102 (52%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
LV+G + ++V ++S K K+ GH + + P + +L+VS S DESVR+W+V+T
Sbjct: 129 LVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVRT 187
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIW 202
G C+ H + V +V F+ D I S D +IW
Sbjct: 188 GKCLKTLPA---HSDPVSAVHFN-RDGSLIVSSSYDGLCRIW 225
Score = 120 (47.3 bits), Expect = 0.00017, P = 0.00017
Identities = 32/113 (28%), Positives = 55/113 (48%)
Query: 91 WACNVDGIP-FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASK 149
+ CN + +V+G + +R+ DV K K+ H D ++ + SL+VS+S
Sbjct: 160 FCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNR-DGSLIVSSSY 218
Query: 150 DESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIW 202
D R+W+ +G C+ V V F P+ Y +A+ +DNT+K+W
Sbjct: 219 DGLCRIWDTASGQCLKTLID--DDNPPVSFVKFSPNGKYILAAT-LDNTLKLW 268
Score = 108 (43.1 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 27/106 (25%), Positives = 52/106 (49%)
Query: 100 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 159
+L + + +I++ + K K+ GH I+++ L+VS S D+++++W +
Sbjct: 86 WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS-DSRLLVSGSDDKTLKVWELS 144
Query: 160 TGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
TG + G H N V +F+P I S D +V+IW ++
Sbjct: 145 TGKSLKTLKG---HSNYVFCCNFNPQSNL-IVSGSFDESVRIWDVR 186
Score = 56 (24.8 bits), Expect = 9.7e-07, Sum P(2) = 9.7e-07
Identities = 20/77 (25%), Positives = 35/77 (45%)
Query: 250 GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIG 309
G +IL+ ++DN + LW+ K + T +KY + F FS + G
Sbjct: 253 GKYILAATLDNTLKLWDYS-KGKCLKTYTGHKNEKYCI------FANFSVTGGKWIVS-G 304
Query: 310 NREGKIFVWELQSSPPV 326
+ + +++W LQS V
Sbjct: 305 SEDNMVYIWNLQSKEVV 321
>POMBASE|SPBPJ4664.04 [details] [associations]
symbol:SPBPJ4664.04 "coatomer alpha subunit
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0006886 "intracellular protein transport" evidence=IC]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=ISO]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=ISO] [GO:0030126 "COPI vesicle coat" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPBPJ4664.04 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198
EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006888 GO:GO:0030126 GO:GO:0006890 HSSP:P63005
HOGENOM:HOG000195913 KO:K05236 OMA:PLAADHI InterPro:IPR016391
PIRSF:PIRSF003354 RefSeq:NP_595279.1 ProteinModelPortal:Q96WV5
STRING:Q96WV5 EnsemblFungi:SPBPJ4664.04.1 GeneID:2541412
KEGG:spo:SPBPJ4664.04 OrthoDB:EOG40VZXP NextBio:20802518
Uniprot:Q96WV5
Length = 1207
Score = 147 (56.8 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 35/106 (33%), Positives = 55/106 (51%)
Query: 99 PFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 158
P V+GG + + V + + KL S GH D + P ++S S D+++R+WN
Sbjct: 66 PLFVSGGDDYKVNVWNYKSRKLLFSLCGHMDYVRVCTFHHEYP-WILSCSDDQTIRIWNW 124
Query: 159 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
Q+ CI I G H + V+ FHPS+ I S +D TV++W +
Sbjct: 125 QSRNCIAILTG---HSHYVMCAAFHPSEDL-IVSASLDQTVRVWDI 166
Score = 46 (21.3 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 31/130 (23%), Positives = 52/130 (40%)
Query: 239 HSNYVDCNRWLG--DFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIK 296
H N V C + + ILS S D I +W+ + TA +Q + WFI
Sbjct: 255 HFNNVSCCLFHPHQELILSASEDKTIRVWDLNRR-------TA--VQTFRRDNDRFWFIT 305
Query: 297 FSCDFHYNAAAIGNREGKIFVWELQSSPP---VLIARLSHA-QSKSPIRQTAMSYDGSTI 352
+ AAA + + V++L+ P + I L + + KS + + +T+
Sbjct: 306 VHPKLNLFAAA---HDSGVMVFKLERERPAHALNINTLLYVNKEKSIVSYDLLRAQSTTV 362
Query: 353 LSCCEDGAIW 362
S G+ W
Sbjct: 363 ASVKHLGSAW 372
>UNIPROTKB|F1N9W1 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0034644 "cellular response to
UV" evidence=IEA] [GO:0045741 "positive regulation of epidermal
growth factor-activated receptor activity" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA]
[GO:2000060 "positive regulation of protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:AADN02016174 IPI:IPI00582326
Ensembl:ENSGALT00000016428 Uniprot:F1N9W1
Length = 587
Score = 143 (55.4 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 35/115 (30%), Positives = 62/115 (53%)
Query: 91 WACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKD 150
++ DGI +V+G ++ IRV DV + GH S+ LK +++VS + D
Sbjct: 425 YSLQFDGI-HVVSGSLDTSIRVWDVETGNCIHTLTGH-QSLTS--GMELKDNILVSGNAD 480
Query: 151 ESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
+V++W+++TG C+ G H++ V + F+ + + I S D TVK+W +K
Sbjct: 481 STVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFV--ITSSD-DGTVKLWDLK 532
Score = 112 (44.5 bits), Expect = 5.6e-05, Sum P(3) = 5.6e-05
Identities = 25/105 (23%), Positives = 53/105 (50%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
+V+G + ++V K ++ VGH + + ++ ++++S S D ++++WN +T
Sbjct: 274 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV---WSSQMRDNIIISGSTDRTLKVWNAET 330
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
G CI G H + V + H R+ S D T+++W ++
Sbjct: 331 GECIHTLYG---HTSTVRCMHLHEK---RVVSGSRDATLRVWDIE 369
Score = 106 (42.4 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 32/114 (28%), Positives = 58/114 (50%)
Query: 91 WACNV-DGIPFLVAGGINGIIRVIDV-SNEKLHKSFVGHGDSINEIRTQPLKPSLVVSAS 148
W+ + D I +++G + ++V + + E +H + GH ++ R L VVS S
Sbjct: 305 WSSQMRDNI--IISGSTDRTLKVWNAETGECIHTLY-GHTSTV---RCMHLHEKRVVSGS 358
Query: 149 KDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIW 202
+D ++R+W+++TG C+ + G H V V + D R+ S D VK+W
Sbjct: 359 RDATLRVWDIETGQCLHVLMG---HVAAVRCVQY---DGRRVVSGAYDFMVKVW 406
Score = 55 (24.4 bits), Expect = 5.6e-05, Sum P(3) = 5.6e-05
Identities = 10/62 (16%), Positives = 29/62 (46%)
Query: 304 NAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWR 363
N GN + + +W++++ + + +K T + ++ + +++ +DG +
Sbjct: 472 NILVSGNADSTVKIWDIKTGQCL---QTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKL 528
Query: 364 WD 365
WD
Sbjct: 529 WD 530
Score = 54 (24.1 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 239 HSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKE 271
H + V C ++ +F+++ S D + LW+ K E
Sbjct: 503 HQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGE 535
Score = 42 (19.8 bits), Expect = 5.6e-05, Sum P(3) = 5.6e-05
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 239 HSNYVDCNRWLGDFILSKSVDNEIVLWE 266
H+N V ++ G ++S S+D I +W+
Sbjct: 420 HTNRVYSLQFDGIHVVSGSLDTSIRVWD 447
Score = 40 (19.1 bits), Expect = 8.7e-05, Sum P(3) = 8.7e-05
Identities = 8/30 (26%), Positives = 17/30 (56%)
Query: 239 HSNYVDCNRWLGDFILSKSVDNEIVLWEPK 268
H V C ++ G ++S + D + +W+P+
Sbjct: 380 HVAAVRCVQYDGRRVVSGAYDFMVKVWDPE 409
>RGD|2321145 [details] [associations]
symbol:Fbxw7 "F-box and WD repeat domain containing 7, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006974 "response
to DNA damage stimulus" evidence=ISO] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0007219 "Notch signaling pathway"
evidence=ISO] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030324 "lung development" evidence=ISO] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=ISO] [GO:0034644 "cellular response to
UV" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] [GO:0070374 "positive
regulation of ERK1 and ERK2 cascade" evidence=ISO] [GO:2000060
"positive regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 RGD:2321145
GO:GO:0005783 GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974
GO:GO:0016567 GO:GO:0019005 GO:GO:0034644 GO:GO:0032876
GO:GO:2000060 GO:GO:0031146 GO:GO:0007062
GeneTree:ENSGT00690000101849 OrthoDB:EOG4MKNFW IPI:IPI00212282
ProteinModelPortal:D3ZQU4 Ensembl:ENSRNOT00000015279
UCSC:RGD:2321145 ArrayExpress:D3ZQU4 Uniprot:D3ZQU4
Length = 588
Score = 143 (55.4 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 35/115 (30%), Positives = 62/115 (53%)
Query: 91 WACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKD 150
++ DGI +V+G ++ IRV DV + GH S+ LK +++VS + D
Sbjct: 467 YSLQFDGI-HVVSGSLDTSIRVWDVETGNCIHTLTGH-QSLTS--GMELKDNILVSGNAD 522
Query: 151 ESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
+V++W+++TG C+ G H++ V + F+ + + I S D TVK+W +K
Sbjct: 523 STVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNFV--ITSSD-DGTVKLWDLK 574
Score = 112 (44.5 bits), Expect = 2.8e-05, Sum P(3) = 2.8e-05
Identities = 25/105 (23%), Positives = 53/105 (50%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
+V+G + ++V K ++ VGH + + ++ ++++S S D ++++WN +T
Sbjct: 316 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV---WSSQMRDNIIISGSTDRTLKVWNAET 372
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
G CI G H + V + H R+ S D T+++W ++
Sbjct: 373 GECIHTLYG---HTSTVRCMHLHEK---RVVSGSRDATLRVWDIE 411
Score = 106 (42.4 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 32/114 (28%), Positives = 58/114 (50%)
Query: 91 WACNV-DGIPFLVAGGINGIIRVIDV-SNEKLHKSFVGHGDSINEIRTQPLKPSLVVSAS 148
W+ + D I +++G + ++V + + E +H + GH ++ R L VVS S
Sbjct: 347 WSSQMRDNI--IISGSTDRTLKVWNAETGECIHTLY-GHTSTV---RCMHLHEKRVVSGS 400
Query: 149 KDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIW 202
+D ++R+W+++TG C+ + G H V V + D R+ S D VK+W
Sbjct: 401 RDATLRVWDIETGQCLHVLMG---HVAAVRCVQY---DGRRVVSGAYDFMVKVW 448
Score = 58 (25.5 bits), Expect = 2.8e-05, Sum P(3) = 2.8e-05
Identities = 11/62 (17%), Positives = 29/62 (46%)
Query: 304 NAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWR 363
N GN + + +W++++ + + SK T + ++ + +++ +DG +
Sbjct: 514 NILVSGNADSTVKIWDIKTGQCL---QTLQGPSKHQSAVTCLQFNKNFVITSSDDGTVKL 570
Query: 364 WD 365
WD
Sbjct: 571 WD 572
Score = 56 (24.8 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 237 SVHSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKE 271
S H + V C ++ +F+++ S D + LW+ K E
Sbjct: 543 SKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGE 577
Score = 42 (19.8 bits), Expect = 2.8e-05, Sum P(3) = 2.8e-05
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 239 HSNYVDCNRWLGDFILSKSVDNEIVLWE 266
H+N V ++ G ++S S+D I +W+
Sbjct: 462 HTNRVYSLQFDGIHVVSGSLDTSIRVWD 489
Score = 40 (19.1 bits), Expect = 4.5e-05, Sum P(3) = 4.5e-05
Identities = 8/30 (26%), Positives = 17/30 (56%)
Query: 239 HSNYVDCNRWLGDFILSKSVDNEIVLWEPK 268
H V C ++ G ++S + D + +W+P+
Sbjct: 422 HVAAVRCVQYDGRRVVSGAYDFMVKVWDPE 451
>UNIPROTKB|F1MNN4 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000060 "positive regulation of protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:DAAA02044177 IPI:IPI00716528 UniGene:Bt.24006
ProteinModelPortal:F1MNN4 Ensembl:ENSBTAT00000010457 Uniprot:F1MNN4
Length = 627
Score = 143 (55.4 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 35/115 (30%), Positives = 62/115 (53%)
Query: 91 WACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKD 150
++ DGI +V+G ++ IRV DV + GH S+ LK +++VS + D
Sbjct: 465 YSLQFDGI-HVVSGSLDTSIRVWDVETGNCIHTLTGH-QSLTS--GMELKDNILVSGNAD 520
Query: 151 ESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
+V++W+++TG C+ G H++ V + F+ + + I S D TVK+W +K
Sbjct: 521 STVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFV--ITSSD-DGTVKLWDLK 572
Score = 112 (44.5 bits), Expect = 7.1e-05, Sum P(3) = 7.1e-05
Identities = 25/105 (23%), Positives = 53/105 (50%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
+V+G + ++V K ++ VGH + + ++ ++++S S D ++++WN +T
Sbjct: 314 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV---WSSQMRDNIIISGSTDRTLKVWNAET 370
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
G CI G H + V + H R+ S D T+++W ++
Sbjct: 371 GECIHTLYG---HTSTVRCMHLHEK---RVVSGSRDATLRVWDIE 409
Score = 106 (42.4 bits), Expect = 0.00032, Sum P(3) = 0.00032
Identities = 32/114 (28%), Positives = 58/114 (50%)
Query: 91 WACNV-DGIPFLVAGGINGIIRVIDV-SNEKLHKSFVGHGDSINEIRTQPLKPSLVVSAS 148
W+ + D I +++G + ++V + + E +H + GH ++ R L VVS S
Sbjct: 345 WSSQMRDNI--IISGSTDRTLKVWNAETGECIHTLY-GHTSTV---RCMHLHEKRVVSGS 398
Query: 149 KDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIW 202
+D ++R+W+++TG C+ + G H V V + D R+ S D VK+W
Sbjct: 399 RDATLRVWDIETGQCLHVLMG---HVAAVRCVQY---DGRRVVSGAYDFMVKVW 446
Score = 55 (24.4 bits), Expect = 7.1e-05, Sum P(3) = 7.1e-05
Identities = 10/62 (16%), Positives = 29/62 (46%)
Query: 304 NAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWR 363
N GN + + +W++++ + + +K T + ++ + +++ +DG +
Sbjct: 512 NILVSGNADSTVKIWDIKTGQCL---QTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKL 568
Query: 364 WD 365
WD
Sbjct: 569 WD 570
Score = 54 (24.1 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 239 HSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKE 271
H + V C ++ +F+++ S D + LW+ K E
Sbjct: 543 HQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGE 575
Score = 42 (19.8 bits), Expect = 7.1e-05, Sum P(3) = 7.1e-05
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 239 HSNYVDCNRWLGDFILSKSVDNEIVLWE 266
H+N V ++ G ++S S+D I +W+
Sbjct: 460 HTNRVYSLQFDGIHVVSGSLDTSIRVWD 487
Score = 40 (19.1 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 8/30 (26%), Positives = 17/30 (56%)
Query: 239 HSNYVDCNRWLGDFILSKSVDNEIVLWEPK 268
H V C ++ G ++S + D + +W+P+
Sbjct: 420 HVAAVRCVQYDGRRVVSGAYDFMVKVWDPE 449
>MGI|MGI:1354695 [details] [associations]
symbol:Fbxw7 "F-box and WD-40 domain protein 7"
species:10090 "Mus musculus" [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0007219 "Notch signaling pathway" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISO;ISA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO] [GO:0030324 "lung
development" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0032876 "negative regulation of DNA endoreduplication"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050821 "protein stabilization" evidence=ISO]
[GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=ISO] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO] Reactome:REACT_93132 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 MGI:MGI:1354695 GO:GO:0005783
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030324
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0001570
GO:GO:0019005 GO:GO:0031146 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 HOVERGEN:HBG051596 OMA:EECLHTL EMBL:AF391202
EMBL:AF391193 EMBL:AF391194 EMBL:AF391195 EMBL:AF391196
EMBL:AF391197 EMBL:AF391198 EMBL:AF391199 EMBL:AF391200
EMBL:AF391201 EMBL:AF391192 EMBL:AF427101 EMBL:BC131648
EMBL:AK032174 IPI:IPI00162935 RefSeq:NP_536353.2 UniGene:Mm.196475
ProteinModelPortal:Q8VBV4 SMR:Q8VBV4 STRING:Q8VBV4 PRIDE:Q8VBV4
Ensembl:ENSMUST00000029727 GeneID:50754 KEGG:mmu:50754
UCSC:uc008pql.2 HOGENOM:HOG000236264 NextBio:307631 Bgee:Q8VBV4
Genevestigator:Q8VBV4 GermOnline:ENSMUSG00000028086 Uniprot:Q8VBV4
Length = 629
Score = 143 (55.4 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 35/115 (30%), Positives = 62/115 (53%)
Query: 91 WACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKD 150
++ DGI +V+G ++ IRV DV + GH S+ LK +++VS + D
Sbjct: 467 YSLQFDGI-HVVSGSLDTSIRVWDVETGNCIHTLTGH-QSLTS--GMELKDNILVSGNAD 522
Query: 151 ESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
+V++W+++TG C+ G H++ V + F+ + + I S D TVK+W +K
Sbjct: 523 STVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNFV--ITSSD-DGTVKLWDLK 574
Score = 112 (44.5 bits), Expect = 3.6e-05, Sum P(3) = 3.6e-05
Identities = 25/105 (23%), Positives = 53/105 (50%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
+V+G + ++V K ++ VGH + + ++ ++++S S D ++++WN +T
Sbjct: 316 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV---WSSQMRDNIIISGSTDRTLKVWNAET 372
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
G CI G H + V + H R+ S D T+++W ++
Sbjct: 373 GECIHTLYG---HTSTVRCMHLHEK---RVVSGSRDATLRVWDIE 411
Score = 106 (42.4 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 32/114 (28%), Positives = 58/114 (50%)
Query: 91 WACNV-DGIPFLVAGGINGIIRVIDV-SNEKLHKSFVGHGDSINEIRTQPLKPSLVVSAS 148
W+ + D I +++G + ++V + + E +H + GH ++ R L VVS S
Sbjct: 347 WSSQMRDNI--IISGSTDRTLKVWNAETGECIHTLY-GHTSTV---RCMHLHEKRVVSGS 400
Query: 149 KDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIW 202
+D ++R+W+++TG C+ + G H V V + D R+ S D VK+W
Sbjct: 401 RDATLRVWDIETGQCLHVLMG---HVAAVRCVQY---DGRRVVSGAYDFMVKVW 448
Score = 58 (25.5 bits), Expect = 3.6e-05, Sum P(3) = 3.6e-05
Identities = 11/62 (17%), Positives = 29/62 (46%)
Query: 304 NAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWR 363
N GN + + +W++++ + + SK T + ++ + +++ +DG +
Sbjct: 514 NILVSGNADSTVKIWDIKTGQCL---QTLQGPSKHQSAVTCLQFNKNFVITSSDDGTVKL 570
Query: 364 WD 365
WD
Sbjct: 571 WD 572
Score = 56 (24.8 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 237 SVHSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKE 271
S H + V C ++ +F+++ S D + LW+ K E
Sbjct: 543 SKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGE 577
Score = 42 (19.8 bits), Expect = 3.6e-05, Sum P(3) = 3.6e-05
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 239 HSNYVDCNRWLGDFILSKSVDNEIVLWE 266
H+N V ++ G ++S S+D I +W+
Sbjct: 462 HTNRVYSLQFDGIHVVSGSLDTSIRVWD 489
Score = 40 (19.1 bits), Expect = 5.7e-05, Sum P(3) = 5.7e-05
Identities = 8/30 (26%), Positives = 17/30 (56%)
Query: 239 HSNYVDCNRWLGDFILSKSVDNEIVLWEPK 268
H V C ++ G ++S + D + +W+P+
Sbjct: 422 HVAAVRCVQYDGRRVVSGAYDFMVKVWDPE 451
>TAIR|locus:2050064 [details] [associations]
symbol:AT2G21390 species:3702 "Arabidopsis thaliana"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005215 "transporter activity" evidence=ISS] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISS] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0030117 "membrane
coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IDA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0005829
"cytosol" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0006886
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC006841 GO:GO:0030126 HSSP:P63005
HOGENOM:HOG000195913 KO:K05236 ProtClustDB:CLSN2914500
InterPro:IPR016391 PIRSF:PIRSF003354 EMBL:AK228692 IPI:IPI00534598
PIR:F84600 RefSeq:NP_179734.1 UniGene:At.28070
ProteinModelPortal:Q9SJT9 SMR:Q9SJT9 STRING:Q9SJT9 PaxDb:Q9SJT9
PRIDE:Q9SJT9 EnsemblPlants:AT2G21390.1 GeneID:816678
KEGG:ath:AT2G21390 GeneFarm:3755 TAIR:At2g21390 InParanoid:Q9SJT9
OMA:GMENTDI PhylomeDB:Q9SJT9 Genevestigator:Q9SJT9 Uniprot:Q9SJT9
Length = 1218
Score = 154 (59.3 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 33/106 (31%), Positives = 57/106 (53%)
Query: 99 PFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 158
P V+GG + I+V + + + +GH D I ++ P +VSAS D+++R+WN
Sbjct: 64 PLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENP-WIVSASDDQTIRIWNW 122
Query: 159 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
Q+ CI + G H + V+ FHP + + S +D TV++W +
Sbjct: 123 QSRTCISVLTG---HNHYVMCASFHPKEDL-VVSASLDQTVRVWDI 164
Score = 38 (18.4 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 251 DFILSKSVDNEIVLWE 266
D I+S S D I +W+
Sbjct: 261 DIIVSNSEDKSIRVWD 276
>UNIPROTKB|Q969H0 [details] [associations]
symbol:FBXW7 "F-box/WD repeat-containing protein 7"
species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0034644 "cellular response to UV" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=IDA] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0050821 "protein stabilization"
evidence=IDA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IMP] [GO:2000346 "negative regulation of
hepatocyte proliferation" evidence=ISS] [GO:0055088 "lipid
homeostasis" evidence=ISS] [GO:0032880 "regulation of protein
localization" evidence=ISS] [GO:0010883 "regulation of lipid
storage" evidence=ISS] [GO:0010868 "negative regulation of
triglyceride biosynthetic process" evidence=ISS] [GO:0001944
"vasculature development" evidence=TAS] [GO:0045746 "negative
regulation of Notch signaling pathway" evidence=ISS] [GO:2000639
"negative regulation of SREBP signaling pathway" evidence=ISS]
Reactome:REACT_17015 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
GO:GO:0005783 GO:GO:0005794 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0043234 GO:GO:0050821
GO:GO:0005654 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 GO:GO:0032880 SUPFAM:SSF81383
GO:GO:0006974 GO:GO:0016567 GO:GO:0055088 GO:GO:0019005
GO:GO:0034644 GO:GO:0001944 GO:GO:0032876 GO:GO:0010883
GO:GO:2000060 GO:GO:0045746 GO:GO:0031146 GO:GO:0007062 KO:K10260
EMBL:AY033553 EMBL:AF383178 EMBL:AY008274 EMBL:AF411971
EMBL:AF411972 EMBL:AY049984 EMBL:AK001933 EMBL:CR749305
EMBL:BC037320 EMBL:BC117244 EMBL:BC117246 EMBL:BC143944
IPI:IPI00056349 IPI:IPI00059165 IPI:IPI00075075 IPI:IPI00402151
RefSeq:NP_001013433.1 RefSeq:NP_060785.2 RefSeq:NP_361014.1
UniGene:Hs.561245 UniGene:Hs.717081 PDB:2OVP PDB:2OVQ PDB:2OVR
PDBsum:2OVP PDBsum:2OVQ PDBsum:2OVR ProteinModelPortal:Q969H0
SMR:Q969H0 DIP:DIP-27613N IntAct:Q969H0 MINT:MINT-276696
STRING:Q969H0 PhosphoSite:Q969H0 DMDM:44887885 PaxDb:Q969H0
PRIDE:Q969H0 DNASU:55294 Ensembl:ENST00000263981
Ensembl:ENST00000281708 Ensembl:ENST00000296555 GeneID:55294
KEGG:hsa:55294 UCSC:uc003imq.3 UCSC:uc003imr.3 UCSC:uc003ims.3
CTD:55294 GeneCards:GC04M153242 HGNC:HGNC:16712 HPA:CAB013793
HPA:CAB029987 MIM:606278 neXtProt:NX_Q969H0 PharmGKB:PA28054
HOVERGEN:HBG051596 InParanoid:Q969H0 OMA:EECLHTL OrthoDB:EOG4MKNFW
PhylomeDB:Q969H0 EvolutionaryTrace:Q969H0 GenomeRNAi:55294
NextBio:59488 ArrayExpress:Q969H0 Bgee:Q969H0 CleanEx:HS_FBXW7
Genevestigator:Q969H0 GermOnline:ENSG00000109670 GO:GO:2000346
GO:GO:2000639 GO:GO:0010868 Uniprot:Q969H0
Length = 707
Score = 143 (55.4 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 35/115 (30%), Positives = 62/115 (53%)
Query: 91 WACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKD 150
++ DGI +V+G ++ IRV DV + GH S+ LK +++VS + D
Sbjct: 545 YSLQFDGI-HVVSGSLDTSIRVWDVETGNCIHTLTGH-QSLTS--GMELKDNILVSGNAD 600
Query: 151 ESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
+V++W+++TG C+ G H++ V + F+ + + I S D TVK+W +K
Sbjct: 601 STVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFV--ITSSD-DGTVKLWDLK 652
Score = 112 (44.5 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 25/105 (23%), Positives = 53/105 (50%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
+V+G + ++V K ++ VGH + + ++ ++++S S D ++++WN +T
Sbjct: 394 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV---WSSQMRDNIIISGSTDRTLKVWNAET 450
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
G CI G H + V + H R+ S D T+++W ++
Sbjct: 451 GECIHTLYG---HTSTVRCMHLHEK---RVVSGSRDATLRVWDIE 489
Score = 106 (42.4 bits), Expect = 0.00049, Sum P(3) = 0.00049
Identities = 32/114 (28%), Positives = 58/114 (50%)
Query: 91 WACNV-DGIPFLVAGGINGIIRVIDV-SNEKLHKSFVGHGDSINEIRTQPLKPSLVVSAS 148
W+ + D I +++G + ++V + + E +H + GH ++ R L VVS S
Sbjct: 425 WSSQMRDNI--IISGSTDRTLKVWNAETGECIHTLY-GHTSTV---RCMHLHEKRVVSGS 478
Query: 149 KDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIW 202
+D ++R+W+++TG C+ + G H V V + D R+ S D VK+W
Sbjct: 479 RDATLRVWDIETGQCLHVLMG---HVAAVRCVQY---DGRRVVSGAYDFMVKVW 526
Score = 55 (24.4 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 10/62 (16%), Positives = 29/62 (46%)
Query: 304 NAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWR 363
N GN + + +W++++ + + +K T + ++ + +++ +DG +
Sbjct: 592 NILVSGNADSTVKIWDIKTGQCL---QTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKL 648
Query: 364 WD 365
WD
Sbjct: 649 WD 650
Score = 54 (24.1 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 239 HSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKE 271
H + V C ++ +F+++ S D + LW+ K E
Sbjct: 623 HQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGE 655
Score = 42 (19.8 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 239 HSNYVDCNRWLGDFILSKSVDNEIVLWE 266
H+N V ++ G ++S S+D I +W+
Sbjct: 540 HTNRVYSLQFDGIHVVSGSLDTSIRVWD 567
Score = 40 (19.1 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 8/30 (26%), Positives = 17/30 (56%)
Query: 239 HSNYVDCNRWLGDFILSKSVDNEIVLWEPK 268
H V C ++ G ++S + D + +W+P+
Sbjct: 500 HVAAVRCVQYDGRRVVSGAYDFMVKVWDPE 529
>ASPGD|ASPL0000017294 [details] [associations]
symbol:AN3926 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001302 EMBL:AACD01000064 KO:K14963 OrthoDB:EOG49CTJ0
RefSeq:XP_661530.1 ProteinModelPortal:Q5B6A4
EnsemblFungi:CADANIAT00004769 GeneID:2873346 KEGG:ani:AN3926.2
HOGENOM:HOG000215221 OMA:VHEDNPP Uniprot:Q5B6A4
Length = 522
Score = 130 (50.8 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 40/127 (31%), Positives = 62/127 (48%)
Query: 77 YVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKS-FVGHGDSINEIR 135
Y E T+SW+ DG + +G + IR+ +V K H + F+GH + + I
Sbjct: 212 YTFEGHLAGISTISWS--PDGAT-IASGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAIA 268
Query: 136 TQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGM 195
P K +++VS S DE+V LW+V++ + H + V +D D IASC
Sbjct: 269 FSP-KGNMLVSGSYDEAVFLWDVRSA---RVMKSLPAHSDPVSGIDV-VWDGTLIASCAT 323
Query: 196 DNTVKIW 202
D V+IW
Sbjct: 324 DGLVRIW 330
Score = 123 (48.4 bits), Expect = 8.5e-06, Sum P(2) = 8.5e-06
Identities = 34/106 (32%), Positives = 52/106 (49%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
+ +GG +G ++V S KL +F GH I+ I P + + S S D+++RLWNV T
Sbjct: 191 IASGGADGAVKVWAASTGKLIYTFEGHLAGISTISWSP-DGATIASGSDDKTIRLWNVLT 249
Query: 161 GICILI-FAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
G F G H N V ++ F P + S D V +W ++
Sbjct: 250 GKAHPTPFIG---HHNYVYAIAFSPKG-NMLVSGSYDEAVFLWDVR 291
Score = 108 (43.1 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 31/108 (28%), Positives = 53/108 (49%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
LV+G + + + DV + ++ KS H D ++ I +L+ S + D VR+W+ T
Sbjct: 276 LVSGSYDEAVFLWDVRSARVMKSLPAHSDPVSGIDVV-WDGTLIASCATDGLVRIWDTST 334
Query: 161 GICILIFAGAGGHRNE--VLSVDFHPSDIYRIASCGMDNTVKIWSMKE 206
G C+ H + V SV F P+ Y +A +D+ V++W E
Sbjct: 335 GQCLRTLV----HEDNPPVSSVKFSPNGKYVLAWT-LDDCVRLWDYVE 377
Score = 94 (38.1 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 23/79 (29%), Positives = 40/79 (50%)
Query: 126 GHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPS 185
GH ++ +R P S++ S D +V++W TG I F G H + ++ + P
Sbjct: 174 GHLRGVSAVRFSP-DASMIASGGADGAVKVWAASTGKLIYTFEG---HLAGISTISWSP- 228
Query: 186 DIYRIASCGMDNTVKIWSM 204
D IAS D T+++W++
Sbjct: 229 DGATIASGSDDKTIRLWNV 247
Score = 78 (32.5 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 17/62 (27%), Positives = 34/62 (54%)
Query: 304 NAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWR 363
N G+ + +F+W+++S+ V+ + +H+ P+ + +DG+ I SC DG +
Sbjct: 274 NMLVSGSYDEAVFLWDVRSAR-VMKSLPAHSD---PVSGIDVVWDGTLIASCATDGLVRI 329
Query: 364 WD 365
WD
Sbjct: 330 WD 331
Score = 54 (24.1 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 14/65 (21%), Positives = 29/65 (44%)
Query: 303 YNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIW 362
Y A G+ +G I W++ + ++ R+ T + +G ++SC DG +
Sbjct: 412 YAFAVSGSEDGAILCWDVVTKK--VLQRIEAHDGVVLGVDTCSTGEGRFMVSCGLDGTVR 469
Query: 363 RWDAI 367
W+ +
Sbjct: 470 VWEEV 474
Score = 47 (21.6 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 243 VD-CNRWLGDFILSKSVDNEIVLWEPKMKEQSP 274
VD C+ G F++S +D + +WE E+ P
Sbjct: 448 VDTCSTGEGRFMVSCGLDGTVRVWEEVGPEREP 480
>UNIPROTKB|E2QUZ3 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070374 "positive regulation of ERK1 and
ERK2 cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 OMA:EECLHTL EMBL:AAEX03010045 RefSeq:XP_867701.2
Ensembl:ENSCAFT00000012962 GeneID:475465 KEGG:cfa:475465
NextBio:20851305 Uniprot:E2QUZ3
Length = 712
Score = 143 (55.4 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 35/115 (30%), Positives = 62/115 (53%)
Query: 91 WACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKD 150
++ DGI +V+G ++ IRV DV + GH S+ LK +++VS + D
Sbjct: 550 YSLQFDGI-HVVSGSLDTSIRVWDVETGNCIHTLTGH-QSLTS--GMELKDNILVSGNAD 605
Query: 151 ESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
+V++W+++TG C+ G H++ V + F+ + + I S D TVK+W +K
Sbjct: 606 STVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFV--ITSSD-DGTVKLWDLK 657
Score = 112 (44.5 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 25/105 (23%), Positives = 53/105 (50%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
+V+G + ++V K ++ VGH + + ++ ++++S S D ++++WN +T
Sbjct: 399 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV---WSSQMRDNIIISGSTDRTLKVWNAET 455
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
G CI G H + V + H R+ S D T+++W ++
Sbjct: 456 GECIHTLYG---HTSTVRCMHLHEK---RVVSGSRDATLRVWDIE 494
Score = 106 (42.4 bits), Expect = 0.00050, Sum P(3) = 0.00050
Identities = 32/114 (28%), Positives = 58/114 (50%)
Query: 91 WACNV-DGIPFLVAGGINGIIRVIDV-SNEKLHKSFVGHGDSINEIRTQPLKPSLVVSAS 148
W+ + D I +++G + ++V + + E +H + GH ++ R L VVS S
Sbjct: 430 WSSQMRDNI--IISGSTDRTLKVWNAETGECIHTLY-GHTSTV---RCMHLHEKRVVSGS 483
Query: 149 KDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIW 202
+D ++R+W+++TG C+ + G H V V + D R+ S D VK+W
Sbjct: 484 RDATLRVWDIETGQCLHVLMG---HVAAVRCVQY---DGRRVVSGAYDFMVKVW 531
Score = 55 (24.4 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 10/62 (16%), Positives = 29/62 (46%)
Query: 304 NAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWR 363
N GN + + +W++++ + + +K T + ++ + +++ +DG +
Sbjct: 597 NILVSGNADSTVKIWDIKTGQCL---QTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKL 653
Query: 364 WD 365
WD
Sbjct: 654 WD 655
Score = 54 (24.1 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 239 HSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKE 271
H + V C ++ +F+++ S D + LW+ K E
Sbjct: 628 HQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGE 660
Score = 42 (19.8 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 239 HSNYVDCNRWLGDFILSKSVDNEIVLWE 266
H+N V ++ G ++S S+D I +W+
Sbjct: 545 HTNRVYSLQFDGIHVVSGSLDTSIRVWD 572
Score = 40 (19.1 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 8/30 (26%), Positives = 17/30 (56%)
Query: 239 HSNYVDCNRWLGDFILSKSVDNEIVLWEPK 268
H V C ++ G ++S + D + +W+P+
Sbjct: 505 HVAAVRCVQYDGRRVVSGAYDFMVKVWDPE 534
>ZFIN|ZDB-GENE-030131-1946 [details] [associations]
symbol:wsb1 "WD repeat and SOCS box-containing 1"
species:7955 "Danio rerio" [GO:0035556 "intracellular signal
transduction" evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143
ZFIN:ZDB-GENE-030131-1946 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 HSSP:P16649 EMBL:BC054567
IPI:IPI00486577 RefSeq:NP_955927.1 UniGene:Dr.33037
ProteinModelPortal:Q7T2F6 STRING:Q7T2F6 Ensembl:ENSDART00000008854
GeneID:323226 KEGG:dre:323226 CTD:26118 HOGENOM:HOG000063727
HOVERGEN:HBG034543 InParanoid:Q7T2F6 KO:K10341 OMA:GHHNDVV
OrthoDB:EOG40ZQXJ NextBio:20808143 Bgee:Q7T2F6 Uniprot:Q7T2F6
Length = 423
Score = 126 (49.4 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 35/115 (30%), Positives = 62/115 (53%)
Query: 101 LVAGGIN-GIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 159
L+A G+N G I++ DV KL + + H D + ++ P ++VSAS+D+++R+W+++
Sbjct: 143 LLATGLNNGRIKIWDVYTGKLLLNLMDHTDIVRDLTFAPDGSLVLVSASRDKTLRVWDLK 202
Query: 160 T-GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEK 213
G + + G H+N V F P D + S G V +W M ++ T + K
Sbjct: 203 DDGNMVKVLRG---HQNWVYCSAFSP-DSSVLCSVGAGKAVFLWDMDKY-TLIRK 252
Score = 55 (24.4 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 29/137 (21%), Positives = 51/137 (37%)
Query: 239 HSNYVDCNRWLGD--FILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPEC------ 290
H N V C + D + + S D +++W+P ++ +P P
Sbjct: 256 HHNDVVCCEFSPDGALLATASYDTRVIVWDPHTATV-----LLELGHLFPPPSPIFAGGA 310
Query: 291 -DIWF--IKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSY 347
D W + F D + A+ +R + W + P I L++ A S
Sbjct: 311 NDRWVRSVAFCHDGRHIASVTDDR--LVRFWSIDEKSPQAIGPLTNGLC------CAFST 362
Query: 348 DGSTILSCCEDGAIWRW 364
DGS + + DG++ W
Sbjct: 363 DGSVLSAGSRDGSVHFW 379
>TAIR|locus:2123929 [details] [associations]
symbol:VIP3 "AT4G29830" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0009910 "negative regulation
of flower development" evidence=IGI;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0080008 "Cul4-RING ubiquitin ligase
complex" evidence=IPI] [GO:0010452 "histone H3-K36 methylation"
evidence=IMP] [GO:0051568 "histone H3-K4 methylation" evidence=IMP]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 EMBL:CP002687
GenomeReviews:CT486007_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AL050352 EMBL:AL161575
GO:GO:0009910 GO:GO:0051568 HSSP:P16649 GO:GO:0080008 GO:GO:0010452
UniGene:At.23602 UniGene:At.72983 HOGENOM:HOG000036765 KO:K12602
OMA:PPSEVWG EMBL:BT008333 IPI:IPI00518529 PIR:T08544
RefSeq:NP_194712.1 SMR:Q9SZQ5 IntAct:Q9SZQ5 STRING:Q9SZQ5
EnsemblPlants:AT4G29830.1 GeneID:829105 KEGG:ath:AT4G29830
TAIR:At4g29830 InParanoid:Q9SZQ5 ProtClustDB:CLSN2685393
Genevestigator:Q9SZQ5 Uniprot:Q9SZQ5
Length = 321
Score = 137 (53.3 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 41/128 (32%), Positives = 62/128 (48%)
Query: 79 DEDKEESFY-TVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQ 137
D+ + F +V+W+ N G L G ++G I V DV KL GH + +
Sbjct: 153 DKTSSKKFVLSVAWSPN--G-KRLACGSMDGTICVFDVDRSKLLHQLEGHNMPVRSLVFS 209
Query: 138 PLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDN 197
P+ P ++ S S D V + + + G +L GH + VLSVD P D IA+ D
Sbjct: 210 PVDPRVLFSGSDDGHVNMHDAE-GKTLL--GSMSGHTSWVLSVDASP-DGGAIATGSSDR 265
Query: 198 TVKIWSMK 205
TV++W +K
Sbjct: 266 TVRLWDLK 273
>UNIPROTKB|F1NUQ0 [details] [associations]
symbol:THOC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000346 "transcription export complex" evidence=IEA]
[GO:0046784 "intronless viral mRNA export from host nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006406 GO:GO:0000346
GeneTree:ENSGT00700000104559 InterPro:IPR011659 Pfam:PF07676
OMA:LAYACDD EMBL:AADN02028708 IPI:IPI00595007
Ensembl:ENSGALT00000040847 Uniprot:F1NUQ0
Length = 381
Score = 127 (49.8 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 38/131 (29%), Positives = 67/131 (51%)
Query: 87 YTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHK--SFVGHGDSINEIRTQPLKPSLV 144
++V+W+C G L +G + V + ++L K ++ GHGDS++++ P P L
Sbjct: 31 HSVAWSCC--GRR-LASGSFDKTASVFLLEKDRLVKENNYRGHGDSVDQLCWHPSNPDLF 87
Query: 145 VSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
V+AS D+++R+W+V+T CI G E +++ + P D IA D+ V
Sbjct: 88 VTASGDKTIRIWDVRTTKCIATVNTKG----ENINICWSP-DGQTIAVGNKDDVVTFIDA 142
Query: 205 KEFWTYVEKSF 215
K + E+ F
Sbjct: 143 KTHRSKAEEQF 153
Score = 52 (23.4 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 12/52 (23%), Positives = 25/52 (48%)
Query: 307 AIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCED 358
A G+ + + +W++ L+ ++ P+R + S+DG + S ED
Sbjct: 212 ATGSADALVSLWDVDE----LVCVRCFSRLDWPVRTLSFSHDGKMLASASED 259
>UNIPROTKB|P49027 [details] [associations]
symbol:RACK1A "Guanine nucleotide-binding protein subunit
beta-like protein A" species:39947 "Oryza sativa Japonica Group"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0050832 "defense response to fungus" evidence=IMP] [GO:0060267
"positive regulation of respiratory burst" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005737 GO:GO:0009507 GO:GO:0046686
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0050832 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0048364 GO:GO:0004871 GO:GO:0048367
GO:GO:0022626 EMBL:AP008207 EMBL:CM000138 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM ProtClustDB:CLSN2682135 EMBL:D38231
EMBL:AP003452 EMBL:AK060428 EMBL:AK098893 EMBL:AK121587 PIR:T03764
RefSeq:NP_001043910.1 UniGene:Os.4684 ProteinModelPortal:P49027
SMR:P49027 STRING:P49027 PRIDE:P49027
EnsemblPlants:LOC_Os01g49290.1 GeneID:4324115
KEGG:dosa:Os01t0686800-02 KEGG:osa:4324115 Gramene:P49027
GO:GO:0060267 Uniprot:P49027
Length = 334
Score = 131 (51.2 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 37/114 (32%), Positives = 56/114 (49%)
Query: 96 DGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRL 155
DG F ++G +G +R+ D+S + FVGH + + + +VSAS+D +++L
Sbjct: 86 DG-QFALSGSWDGELRLWDLSTGVTTRRFVGHDKDVLSVAFS-VDNRQIVSASRDRTIKL 143
Query: 156 WNVQTGICILIFAG--AGG--HRNEVLSVDFHPSDIY-RIASCGMDNTVKIWSM 204
WN G C G GG H V V F P+ I S D TVK+W++
Sbjct: 144 WNT-LGECKYTIGGDLGGGEGHNGWVSCVRFSPNTFQPTIVSGSWDRTVKVWNL 196
Score = 45 (20.9 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 15/53 (28%), Positives = 28/53 (52%)
Query: 312 EGKIFVWELQSSPPVLIARLSHAQSKSPIRQ-TAMSY--DGSTILSCCEDGAI 361
+ I +W+L+S V + SK+ + T++++ DGST+ + DG I
Sbjct: 270 QDSIKIWDLESKHIVQDLKPEIPVSKNQMLYCTSLNWSADGSTLYAGYTDGTI 322
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 114 (45.2 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 32/114 (28%), Positives = 54/114 (47%)
Query: 94 NVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESV 153
N DG L + + + V D + K GH +N P LV + S D +V
Sbjct: 145 NTDG-SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTV 203
Query: 154 RLWNVQTGICILIFAGAGGHRNEVLSVDFHP-SDIYRIASCGMDNTVKIWSMKE 206
+LW+++ + F +VL+V F+ SD +I S G+DN +K+W +++
Sbjct: 204 KLWDIRKKAAVQTFQNT----YQVLAVTFNDTSD--QIISGGIDNDIKVWDLRQ 251
Score = 66 (28.3 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 26/113 (23%), Positives = 52/113 (46%)
Query: 250 GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIG 309
G ++LS ++DN + +W+ ++ +P E I Q V + ++ S + A G
Sbjct: 274 GSYLLSNAMDNTVRIWD--VRPFAPKERCVKIFQGN-VHNFEKNLLRCSWSPDGSKIAGG 330
Query: 310 NREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIW 362
+ + ++VW+ +S +L HA S + + A + ILS D ++
Sbjct: 331 SADRFVYVWDT-TSRRILYKLPGHAGS---VNELAFHPEEPIILSASSDKRLY 379
Score = 63 (27.2 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 309 GNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 368
G + I VW+L+ + R HA S + + ++S +GS +LS D + WD P
Sbjct: 238 GGIDNDIKVWDLRQNKLTYTMR-GHADSVTGL---SLSSEGSYLLSNAMDNTVRIWDVRP 293
Score = 47 (21.6 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 28/122 (22%), Positives = 53/122 (43%)
Query: 251 DFILSKSVDNEIVLWEPKMKEQS-PGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIG 309
D I+S +DN+I +W+ + + + G AD + + S + Y +
Sbjct: 233 DQIISGGIDNDIKVWDLRQNKLTYTMRGHAD----------SVTGLSLSSEGSY---LLS 279
Query: 310 NR-EGKIFVWELQSSPP----VLIARLS-HAQSKSPIRQTAMSYDGSTILSCCEDGAIWR 363
N + + +W+++ P V I + + H K+ +R + S DGS I D ++
Sbjct: 280 NAMDNTVRIWDVRPFAPKERCVKIFQGNVHNFEKNLLR-CSWSPDGSKIAGGSADRFVYV 338
Query: 364 WD 365
WD
Sbjct: 339 WD 340
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 141 (54.7 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 34/118 (28%), Positives = 62/118 (52%)
Query: 93 CNVDGIP---FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASK 149
C++D P F+ +G ++ I++ DV + + H ++ +R P + SA+
Sbjct: 109 CSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSP-DGKWLASAAD 167
Query: 150 DESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEF 207
D +V+LW++ G + F G H V V+FHPS+ Y +AS D T++ W +++F
Sbjct: 168 DHTVKLWDLTAGKVMFEFTG---HSGPVNVVEFHPSE-YLLASGSSDRTIRFWDLEKF 221
Score = 132 (51.5 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 34/104 (32%), Positives = 54/104 (51%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
+VAG +G IRV D+ K+ ++ +GH +I + P S V S S D ++LW+V+
Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYG-SFVASGSLDTDIKLWDVRR 136
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
CI + H V + F P + +AS D+TVK+W +
Sbjct: 137 KGCIFKYKS---HTQAVRCLRFSPDGKW-LASAADDHTVKLWDL 176
Score = 125 (49.1 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 28/105 (26%), Positives = 52/105 (49%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
L GG + + V V+ S GH I ++ K L+V+ S+ S+R+W+++
Sbjct: 36 LATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISA-KEELIVAGSQSGSIRVWDLEA 94
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
+ G H+ + S+DFHP + +AS +D +K+W ++
Sbjct: 95 AKILRTLLG---HKANICSLDFHPYGSF-VASGSLDTDIKLWDVR 135
Score = 57 (25.1 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 27/116 (23%), Positives = 46/116 (39%)
Query: 250 GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIG 309
G F+ S S+D +I LW+ + K + KY + ++FS D + A+A
Sbjct: 117 GSFVASGSLDTDIKLWDVRRK---------GCIFKYKSHTQAVRCLRFSPDGKWLASAAD 167
Query: 310 NREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWD 365
+ K+ W+L + V+ H+ P+ + S D I WD
Sbjct: 168 DHTVKL--WDLTAGK-VMFEFTGHS---GPVNVVEFHPSEYLLASGSSDRTIRFWD 217
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 141 (54.7 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 32/104 (30%), Positives = 58/104 (55%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
+VAG ++G +R+ D+ K+ ++ +GH SI+ + P+ L S S D +++LW+V+
Sbjct: 78 VVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLA-SGSVDSNIKLWDVRR 136
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
C+ + G H V + F P + +AS D+TVK+W +
Sbjct: 137 KGCVFRYKG---HTQAVRCLAFSPDGKW-LASASDDSTVKLWDL 176
Score = 137 (53.3 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 33/108 (30%), Positives = 57/108 (52%)
Query: 100 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 159
+L +G ++ I++ DV + + GH ++ + P + SAS D +V+LW++
Sbjct: 119 YLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSP-DGKWLASASDDSTVKLWDLI 177
Query: 160 TGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEF 207
G I F H + V V FHP++ Y +AS D TVK+W +++F
Sbjct: 178 AGKMITEFTS---HTSAVNVVQFHPNE-YLLASGSADRTVKLWDLEKF 221
>DICTYBASE|DDB_G0275045 [details] [associations]
symbol:gpbB "Guanine nucleotide-binding protein
subunit beta-like protein" species:44689 "Dictyostelium discoideum"
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275045 GO:GO:0045335
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000013 KO:K14753 OMA:IRVWQVM
EMBL:U27537 RefSeq:XP_643839.1 ProteinModelPortal:P46800 SMR:P46800
IntAct:P46800 STRING:P46800 SWISS-2DPAGE:P46800 PRIDE:P46800
EnsemblProtists:DDB0185122 GeneID:8619886 KEGG:ddi:DDB_G0275045
Uniprot:P46800
Length = 329
Score = 125 (49.1 bits), Expect = 9.1e-06, Sum P(2) = 9.1e-06
Identities = 33/126 (26%), Positives = 57/126 (45%)
Query: 82 KEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKP 141
K S + + DG F ++G + +R+ D++ + F GH + +
Sbjct: 67 KGHSHFVQDVVISHDG-QFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFSSDNR 125
Query: 142 SLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKI 201
++S S+D ++++WN G C G H++ V + F P+ I S DN VKI
Sbjct: 126 Q-IISGSRDATIKVWNT-LGECKFTLEGPEAHQDWVSCIRFSPNTP-TIVSGSWDNKVKI 182
Query: 202 WSMKEF 207
W +K F
Sbjct: 183 WDIKSF 188
Score = 116 (45.9 bits), Expect = 2.4e-06, Sum P(3) = 2.4e-06
Identities = 27/85 (31%), Positives = 44/85 (51%)
Query: 119 KLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVL 178
K H+S GH + ++ +S S D ++RLW++ G+ +F G H +V+
Sbjct: 61 KAHRSLKGHSHFVQDVVISH-DGQFALSGSWDNTLRLWDITKGVSTRLFKG---HTQDVM 116
Query: 179 SVDFHPSDIYRIASCGMDNTVKIWS 203
SV F SD +I S D T+K+W+
Sbjct: 117 SVAFS-SDNRQIISGSRDATIKVWN 140
Score = 50 (22.7 bits), Expect = 2.4e-06, Sum P(3) = 2.4e-06
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 239 HSNYVDCNRWLGDF--ILSKSVDNEIVLWEPK 268
H ++V C R+ + I+S S DN++ +W+ K
Sbjct: 155 HQDWVSCIRFSPNTPTIVSGSWDNKVKIWDIK 186
Score = 45 (20.9 bits), Expect = 2.4e-06, Sum P(3) = 2.4e-06
Identities = 17/61 (27%), Positives = 25/61 (40%)
Query: 307 AIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDA 366
A G ++ +WEL S P L ++++ I A S LS D I WD
Sbjct: 214 ASGGKDTFACLWELSSGKP-----LYKLEARNTINALAFS-PNKYWLSAATDDKIIIWDL 267
Query: 367 I 367
+
Sbjct: 268 L 268
Score = 39 (18.8 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 6/18 (33%), Positives = 13/18 (72%)
Query: 254 LSKSVDNEIVLWEPKMKE 271
LS + D++I++W+ K+
Sbjct: 254 LSAATDDKIIIWDLLTKQ 271
>POMBASE|SPBC713.05 [details] [associations]
symbol:SPBC713.05 "WD repeat protein, human MAPK
organizer 1 (MORG1) family (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045292 "mRNA cis splicing, via spliceosome" evidence=ISS]
[GO:0071276 "cellular response to cadmium ion" evidence=IMP]
[GO:0071585 "detoxification of cadmium ion" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPBC713.05 GO:GO:0005829 GO:GO:0005634 GO:GO:0043234
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 GO:GO:0071276 GO:GO:0071585
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045292
HOGENOM:HOG000091642 KO:K13124 OMA:CKQGAVR RefSeq:NP_595344.1
ProteinModelPortal:Q9C1X0 EnsemblFungi:SPBC713.05.1 GeneID:2541181
KEGG:spo:SPBC713.05 OrthoDB:EOG4K9FNP NextBio:20802293
Uniprot:Q9C1X0
Length = 297
Score = 118 (46.6 bits), Expect = 2.5e-06, Sum P(3) = 2.5e-06
Identities = 24/61 (39%), Positives = 38/61 (62%)
Query: 144 VVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWS 203
V++A + VRLWNV++G CI +AG H +E+L +D D + ASCG D +++W
Sbjct: 29 VLAAGNERVVRLWNVKSGACIHEYAG---HGHEILDLDL-VYDSTKFASCGGDKFIQVWD 84
Query: 204 M 204
+
Sbjct: 85 V 85
Score = 48 (22.0 bits), Expect = 2.5e-06, Sum P(3) = 2.5e-06
Identities = 5/18 (27%), Positives = 14/18 (77%)
Query: 309 GNREGKIFVWELQSSPPV 326
G+ +GK+++W+L++ +
Sbjct: 242 GSEDGKVYLWDLENETQI 259
Score = 42 (19.8 bits), Expect = 2.5e-06, Sum P(3) = 2.5e-06
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 253 ILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDI 292
+ S S D+++ LW+ + SP + AD K V DI
Sbjct: 113 LASGSFDSKVRLWDCRSNSFSPIQVLADA--KDSVSSIDI 150
Score = 40 (19.1 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 6/24 (25%), Positives = 14/24 (58%)
Query: 342 QTAMSYDGSTILSCCEDGAIWRWD 365
+++ + + + S EDG ++ WD
Sbjct: 229 RSSFNQSETIVFSGSEDGKVYLWD 252
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 115 (45.5 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 33/114 (28%), Positives = 54/114 (47%)
Query: 94 NVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESV 153
N DG L + + + V D + K GH +N P LV + S D +V
Sbjct: 119 NTDG-SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTV 177
Query: 154 RLWNVQTGICILIFAGAGGHRNEVLSVDFHP-SDIYRIASCGMDNTVKIWSMKE 206
+LW+++ I F +VL+V F+ SD +I S G+DN +K+W +++
Sbjct: 178 KLWDIRKKAAIQTFQNT----YQVLAVTFNDTSD--QIISGGIDNDIKVWDLRQ 225
Score = 63 (27.2 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 309 GNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 368
G + I VW+L+ + R HA S + + ++S +GS +LS D + WD P
Sbjct: 212 GGIDNDIKVWDLRQNKLTYTMR-GHADSVTGL---SLSSEGSYLLSNAMDNTVRVWDVRP 267
Score = 53 (23.7 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 25/114 (21%), Positives = 49/114 (42%)
Query: 250 GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIG 309
G ++LS ++DN + +W+ ++ +P E I Q V + ++ S + A G
Sbjct: 248 GSYLLSNAMDNTVRVWD--VRPFAPKERCVKIFQGN-VHNFEKNLLRCSWSPDGSKIAAG 304
Query: 310 NREGKIFVWELQSSPPV-LIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIW 362
+ + ++ W S + I R H S+ + +G ILS D ++
Sbjct: 305 SADSFLYPWHSLSVRSLGQIPR--HRLSRQ--EDSVKPQEGIXILSASSDKRLY 354
Score = 47 (21.6 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 28/124 (22%), Positives = 55/124 (44%)
Query: 251 DFILSKSVDNEIVLWEPKMKEQS-PGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIG 309
D I+S +DN+I +W+ + + + G AD + + S + Y +
Sbjct: 207 DQIISGGIDNDIKVWDLRQNKLTYTMRGHAD----------SVTGLSLSSEGSY---LLS 253
Query: 310 NR-EGKIFVWELQSSPP----VLIARLS-HAQSKSPIRQTAMSYDGSTILSCCEDGAIWR 363
N + + VW+++ P V I + + H K+ +R + S DGS I + D ++
Sbjct: 254 NAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLR-CSWSPDGSKIAAGSADSFLYP 312
Query: 364 WDAI 367
W ++
Sbjct: 313 WHSL 316
>POMBASE|SPCC16A11.02 [details] [associations]
symbol:utp13 "U3 snoRNP-associated protein Utp13
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPCC16A11.02 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032040 GO:GO:0030490 GO:GO:0005732 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP PIR:T41075 RefSeq:NP_587989.2
ProteinModelPortal:Q9USN3 STRING:Q9USN3 EnsemblFungi:SPCC16A11.02.1
GeneID:2539337 KEGG:spo:SPCC16A11.02 OrthoDB:EOG4DZ53K
NextBio:20800502 Uniprot:Q9USN3
Length = 777
Score = 135 (52.6 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 30/107 (28%), Positives = 60/107 (56%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDES-VRLWNVQ 159
L GG G+++V D++ + SF GHG I+ + + + V+++ D+S VRLW++
Sbjct: 118 LATGGAEGLVKVWDIAGAYVTHSFRGHGGVISALCFGKHQNTWVLASGADDSRVRLWDLN 177
Query: 160 TGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKE 206
+ + +F G H + + + F P+ + + S D TV++W++K+
Sbjct: 178 SSRSMAVFEG---HSSVIRGLTFEPTGSF-LLSGSRDKTVQVWNIKK 220
Score = 50 (22.7 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 14/53 (26%), Positives = 25/53 (47%)
Query: 312 EGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRW 364
+G + VW L S +A L + + + + A +DGS ++S D + W
Sbjct: 570 DGLVKVWSLSSGE--CVATLDNHEDR--VWALASRFDGSLLVSGGADAVVSVW 618
Score = 42 (19.8 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 345 MSYDGSTILSCCEDGAIWRWDA 366
+S DG I S +D I WD+
Sbjct: 473 VSKDGRIIASASQDKTIKLWDS 494
>ZFIN|ZDB-GENE-990415-89 [details] [associations]
symbol:gnb2l1 "guanine nucleotide binding protein (G
protein), beta polypeptide 2-like 1" species:7955 "Danio rerio"
[GO:0001525 "angiogenesis" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0060027 "convergent extension involved in
gastrulation" evidence=IGI;IMP] [GO:0051302 "regulation of cell
division" evidence=IMP] [GO:2000114 "regulation of establishment of
cell polarity" evidence=IMP] [GO:0032880 "regulation of protein
localization" evidence=IMP] [GO:0030178 "negative regulation of Wnt
receptor signaling pathway" evidence=IMP] [GO:2000543 "positive
regulation of gastrulation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-990415-89 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032880 GO:GO:0001525 GO:GO:0030178 GO:GO:0060027
GO:GO:2000114 GO:GO:0051302 GO:GO:2000543 HOGENOM:HOG000091643
KO:K14753 CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
OrthoDB:EOG4933J5 EMBL:AF025330 EMBL:AY423038 EMBL:BC049459
IPI:IPI00507097 RefSeq:NP_571519.1 UniGene:Dr.75572
ProteinModelPortal:O42248 SMR:O42248 STRING:O42248 PRIDE:O42248
Ensembl:ENSDART00000061001 GeneID:30722 KEGG:dre:30722
InParanoid:O42248 NextBio:20807071 ArrayExpress:O42248 Bgee:O42248
Uniprot:O42248
Length = 317
Score = 131 (51.2 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 33/110 (30%), Positives = 54/110 (49%)
Query: 96 DGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRL 155
DG F ++G +G +R+ D++ + FVGH + + +VS S+D++++L
Sbjct: 74 DG-QFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSADNRQ-IVSGSRDKTIKL 131
Query: 156 WNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRI-ASCGMDNTVKIWSM 204
WN G+C H V V F P+ I SCG D VK+W++
Sbjct: 132 WNT-LGVCKYTIQD-DSHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNL 179
Score = 42 (19.8 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 13/49 (26%), Positives = 19/49 (38%)
Query: 317 VWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWD 365
VW L + + +H + +S DGS S +DG WD
Sbjct: 176 VWNLANCK----LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWD 220
>TAIR|locus:2029939 [details] [associations]
symbol:PEX7 "AT1G29260" species:3702 "Arabidopsis
thaliana" [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006625 "protein
targeting to peroxisome" evidence=IMP] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0016558 "protein import into
peroxisome matrix" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005778 EMBL:AC021043
HSSP:P16649 GO:GO:0080008 GO:GO:0006625 TCDB:3.A.20.1.2
EMBL:AF130973 EMBL:BT024863 IPI:IPI00548845 PIR:B86415
RefSeq:NP_174220.1 UniGene:At.11271 ProteinModelPortal:Q9XF57
SMR:Q9XF57 STRING:Q9XF57 PaxDb:Q9XF57 PRIDE:Q9XF57
EnsemblPlants:AT1G29260.1 GeneID:839800 KEGG:ath:AT1G29260
GeneFarm:3660 TAIR:At1g29260 HOGENOM:HOG000204332 InParanoid:Q9LP54
KO:K13341 OMA:GHEYAVR PhylomeDB:Q9XF57 ProtClustDB:CLSN2679693
Genevestigator:Q9XF57 Uniprot:Q9XF57
Length = 317
Score = 115 (45.5 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 44/180 (24%), Positives = 82/180 (45%)
Query: 37 YAVVFN-FIDSRYFNV----FATVGGNRVTVYQCLEGGVIAALQSYVDEDKEESFYTVSW 91
Y+V F+ F +SR F +G R+ V + L G +S V D ++ Y V W
Sbjct: 11 YSVKFSPFYESRLAVATAQNFGILGNGRIHVLE-LAPGAPGVTES-VSYDTADAVYDVCW 68
Query: 92 ACNVDGIPFLVAGGINGIIRVIDVS---NEKLHKSFVGHGDSINEIRTQPLKPSLVVSAS 148
+ + D + L+A +G +++ D + +SF H + + P + +++S
Sbjct: 69 SESHDSV--LIAAIGDGSVKIYDTALPPPSNPIRSFQEHAREVQSVDYNPTRRDSFLTSS 126
Query: 149 KDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPS--DIYRIASCGMDNTVKIWSMKE 206
D++V+LW + + F H V ++P D++ AS D T++IW ++E
Sbjct: 127 WDDTVKLWAMDRPASVRTFKE---HAYCVYQAVWNPKHGDVF--ASASGDCTLRIWDVRE 181
Score = 60 (26.2 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 28/117 (23%), Positives = 47/117 (40%)
Query: 250 GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIG 309
GD S S D + +W+ ++E PG + + CD W C A
Sbjct: 162 GDVFASASGDCTLRIWD--VRE--PGSTMIIPAHDFEILSCD-WNKYDDC-----ILATS 211
Query: 310 NREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMS-YDGSTILSCCEDGAIWRWD 365
+ + + VW+++S L H + +R+ S + S I SC D ++ WD
Sbjct: 212 SVDKTVKVWDVRSYRVPLAVLNGHGYA---VRKVKFSPHRRSLIASCSYDMSVCLWD 265
>MGI|MGI:1913972 [details] [associations]
symbol:Spag16 "sperm associated antigen 16" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874
"microtubule" evidence=IDA] [GO:0005929 "cilium" evidence=IEA]
[GO:0005930 "axoneme" evidence=IDA] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0019901 "protein kinase binding" evidence=IPI]
[GO:0030030 "cell projection organization" evidence=IEA]
[GO:0035085 "cilium axoneme" evidence=IDA] [GO:0042384 "cilium
assembly" evidence=IDA] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1913972 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086
GeneTree:ENSGT00700000104486 CTD:79582 HOVERGEN:HBG086482
OMA:EGHNHAV OrthoDB:EOG41ZF9F EMBL:AF490391 EMBL:AK014865
EMBL:AK015884 EMBL:AK016618 EMBL:AK083083 EMBL:BC120668
IPI:IPI00177216 IPI:IPI00473221 IPI:IPI00556714 IPI:IPI00556881
RefSeq:NP_001258462.1 RefSeq:NP_080004.1 RefSeq:NP_083436.2
UniGene:Mm.440554 ProteinModelPortal:Q8K450 SMR:Q8K450
DIP:DIP-59752N STRING:Q8K450 PhosphoSite:Q8K450 PaxDb:Q8K450
PRIDE:Q8K450 Ensembl:ENSMUST00000065425 Ensembl:ENSMUST00000113940
GeneID:66722 KEGG:mmu:66722 UCSC:uc007bjg.1 UCSC:uc007bjh.1
UCSC:uc007bji.1 HOGENOM:HOG000256703 InParanoid:Q0VBE7
NextBio:322475 Bgee:Q8K450 CleanEx:MM_SPAG16 Genevestigator:Q8K450
GermOnline:ENSMUSG00000053153 Uniprot:Q8K450
Length = 639
Score = 139 (54.0 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 31/117 (26%), Positives = 59/117 (50%)
Query: 91 WACNVDGI-PFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASK 149
W+C F+ + ++ ++ DV++E+ + GH DS+N I P +++++AS
Sbjct: 448 WSCTWHSCGDFVASASLDMTSKIWDVNSERCRYTLYGHTDSVNSIEFFPFS-NILLTASA 506
Query: 150 DESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKE 206
D+++ +W+ +TG C GH + V F P + IASC K+W ++
Sbjct: 507 DKTLSVWDARTGKCE---QSLYGHMHSVNDATFTPRG-HIIASCDARGVTKLWDFRK 559
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 133 (51.9 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 33/108 (30%), Positives = 59/108 (54%)
Query: 99 PFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 158
PFL +G + IR+ DVS + GH + + + P +VSAS D+++R+W++
Sbjct: 310 PFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHP-GGKYLVSASDDKTIRVWDL 368
Query: 159 QTGICI-LIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
+ C+ ++A H++ S+DFH + Y + S +D TVK+W +
Sbjct: 369 RNKRCMKTLYA----HQHFCTSIDFHKAHPY-VISGSVDQTVKVWECR 411
Score = 130 (50.8 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 35/117 (29%), Positives = 57/117 (48%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
+V+ + IR+ D + +S GH DS+ ++ + L+ S S D S++LW+ Q
Sbjct: 123 MVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDA-QGKLLASCSADLSIKLWDFQQ 181
Query: 161 GI-CILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFT 216
CI G H + V SV F P+ Y + S D T+K+W + Y K++T
Sbjct: 182 SYECIKTMHG---HDHNVSSVAFVPAGDY-VLSASRDRTIKMWEVAT--GYCVKTYT 232
Score = 122 (48.0 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 26/82 (31%), Positives = 44/82 (53%)
Query: 122 KSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVD 181
K+ GH +++ + P V+SAS+D ++++W V TG C+ + G HR V V
Sbjct: 187 KTMHGHDHNVSSVAFVPAG-DYVLSASRDRTIKMWEVATGYCVKTYTG---HREWVRMVR 242
Query: 182 FH-PSDIYRIASCGMDNTVKIW 202
H I+ A+C D T+++W
Sbjct: 243 VHIEGSIF--ATCSNDQTIRVW 262
Score = 111 (44.1 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 27/90 (30%), Positives = 47/90 (52%)
Query: 123 SFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDF 182
S GH SI + P+ +L+VSAS+D ++R+W+ +TG GH + V V F
Sbjct: 103 SLTGHRASITRVIFHPIF-ALMVSASEDATIRIWDFETGE---YERSLKGHTDSVQDVAF 158
Query: 183 HPSDIYRIASCGMDNTVKIWSMKEFWTYVE 212
+ASC D ++K+W ++ + ++
Sbjct: 159 DAQGKL-LASCSADLSIKLWDFQQSYECIK 187
Score = 51 (23.0 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 250 GDFILSKSVDNEIVLWE 266
GD++LS S D I +WE
Sbjct: 205 GDYVLSASRDRTIKMWE 221
Score = 47 (21.6 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 15/59 (25%), Positives = 28/59 (47%)
Query: 307 AIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWD 365
A G+R+ I +W++ V + L+ + + +R A G ++S +D I WD
Sbjct: 313 ASGSRDKTIRIWDVS----VGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWD 367
Score = 41 (19.5 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 6/15 (40%), Positives = 11/15 (73%)
Query: 252 FILSKSVDNEIVLWE 266
+++S SVD + +WE
Sbjct: 395 YVISGSVDQTVKVWE 409
Score = 37 (18.1 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 250 GDFILSKSVDNEIVLWEPKMK 270
G +++S S D I +W+ + K
Sbjct: 351 GKYLVSASDDKTIRVWDLRNK 371
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 115 (45.5 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 33/114 (28%), Positives = 54/114 (47%)
Query: 94 NVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESV 153
N DG L + + + V D + K GH +N P LV + S D +V
Sbjct: 118 NTDG-SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTV 176
Query: 154 RLWNVQTGICILIFAGAGGHRNEVLSVDFHP-SDIYRIASCGMDNTVKIWSMKE 206
+LW+++ I F +VL+V F+ SD +I S G+DN +K+W +++
Sbjct: 177 KLWDIRKKAAIQTFQNT----YQVLAVTFNDTSD--QIISGGIDNDIKVWDLRQ 224
Score = 63 (27.2 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 309 GNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 368
G + I VW+L+ + R HA S + + ++S +GS +LS D + WD P
Sbjct: 211 GGIDNDIKVWDLRQNKLTYTMR-GHADSVTGL---SLSSEGSYLLSNAMDNTVRVWDVRP 266
Score = 61 (26.5 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 21/87 (24%), Positives = 42/87 (48%)
Query: 250 GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIG 309
G ++LS ++DN + +W+ ++ +P E I Q V + ++ S + A G
Sbjct: 247 GSYLLSNAMDNTVRVWD--VRPFAPKERCVKIFQGN-VHNFEKNLLRCSWSPDGSKIAAG 303
Query: 310 NREGKIFVWELQSSPPVLIARLSHAQS 336
+ + ++VW+ +S +L HA S
Sbjct: 304 SADRFVYVWDT-TSRRILYKLPGHAGS 329
Score = 49 (22.3 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 29/122 (23%), Positives = 54/122 (44%)
Query: 251 DFILSKSVDNEIVLWEPKMKEQS-PGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIG 309
D I+S +DN+I +W+ + + + G AD + + S + Y +
Sbjct: 206 DQIISGGIDNDIKVWDLRQNKLTYTMRGHAD----------SVTGLSLSSEGSY---LLS 252
Query: 310 NR-EGKIFVWELQSSPP----VLIARLS-HAQSKSPIRQTAMSYDGSTILSCCEDGAIWR 363
N + + VW+++ P V I + + H K+ +R + S DGS I + D ++
Sbjct: 253 NAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLR-CSWSPDGSKIAAGSADRFVYV 311
Query: 364 WD 365
WD
Sbjct: 312 WD 313
>UNIPROTKB|P63247 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9031 "Gallus gallus" [GO:0007165 "signal
transduction" evidence=TAS] [GO:0001891 "phagocytic cup"
evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=IEA] [GO:0019903 "protein
phosphatase binding" evidence=IEA] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0030971
"receptor tyrosine kinase binding" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0043547 "positive regulation
of GTPase activity" evidence=IEA] [GO:0048471 "perinuclear region
of cytoplasm" evidence=IEA] [GO:0050765 "negative regulation of
phagocytosis" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:2001244 "positive regulation
of intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005737
GO:GO:0048471 GO:GO:0007165 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547
GO:GO:0043025 GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0008200 GO:GO:0030178
GO:GO:2001244 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753
CTD:10399 HOVERGEN:HBG000277 OrthoDB:EOG4933J5 EMBL:M24193
EMBL:AY393848 EMBL:AY694127 EMBL:AB268588 IPI:IPI00596315
PIR:A33928 RefSeq:NP_001004378.1 UniGene:Gga.7066
ProteinModelPortal:P63247 SMR:P63247 STRING:P63247 PRIDE:P63247
GeneID:417044 KEGG:gga:417044 InParanoid:A5HUK6 NextBio:20820423
Uniprot:P63247
Length = 317
Score = 130 (50.8 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 33/110 (30%), Positives = 54/110 (49%)
Query: 96 DGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRL 155
DG F ++G +G +R+ D++ + FVGH + + +VS S+D++++L
Sbjct: 74 DG-QFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQ-IVSGSRDKTIKL 131
Query: 156 WNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRI-ASCGMDNTVKIWSM 204
WN G+C H V V F P+ I SCG D VK+W++
Sbjct: 132 WNT-LGVCKYTVQDES-HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL 179
Score = 42 (19.8 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 13/49 (26%), Positives = 19/49 (38%)
Query: 317 VWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWD 365
VW L + + +H + +S DGS S +DG WD
Sbjct: 176 VWNLANCK----LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWD 220
>UNIPROTKB|P63243 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9913 "Bos taurus" [GO:0030971 "receptor
tyrosine kinase binding" evidence=ISS] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=ISS] [GO:0050765
"negative regulation of phagocytosis" evidence=ISS] [GO:0043547
"positive regulation of GTPase activity" evidence=ISS] [GO:0043065
"positive regulation of apoptotic process" evidence=ISS]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0001891 "phagocytic cup" evidence=ISS] [GO:0042169 "SH2 domain
binding" evidence=ISS] [GO:0005080 "protein kinase C binding"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0032464 "positive regulation of protein homooligomerization"
evidence=ISS] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0030335 "positive regulation of cell migration" evidence=ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISS]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=ISS] [GO:2000543 "positive regulation of gastrulation"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0043025 "neuronal cell body" evidence=ISS]
[GO:0043204 "perikaryon" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:0019903 "protein phosphatase
binding" evidence=IEA] [GO:0008656 "cysteine-type endopeptidase
activator activity involved in apoptotic process" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AJ132860 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0006417 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
GO:GO:0043547 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032880
GO:GO:0048511 GO:GO:0007049 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0042169 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:0030971 GO:GO:0030178 GO:GO:2001244 GO:GO:0007369
GO:GO:0032464 GO:GO:2000114 GO:GO:0051302 GO:GO:2000543
GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
EMBL:BC102286 IPI:IPI00700792 RefSeq:NP_786996.1 UniGene:Bt.2981
ProteinModelPortal:P63243 SMR:P63243 STRING:P63243 PRIDE:P63243
Ensembl:ENSBTAT00000026183 GeneID:327682 KEGG:bta:327682 CTD:10399
GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277 InParanoid:P63243
OrthoDB:EOG4933J5 NextBio:20810147 ArrayExpress:P63243
Uniprot:P63243
Length = 317
Score = 130 (50.8 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 33/110 (30%), Positives = 54/110 (49%)
Query: 96 DGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRL 155
DG F ++G +G +R+ D++ + FVGH + + +VS S+D++++L
Sbjct: 74 DG-QFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQ-IVSGSRDKTIKL 131
Query: 156 WNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRI-ASCGMDNTVKIWSM 204
WN G+C H V V F P+ I SCG D VK+W++
Sbjct: 132 WNT-LGVCKYTVQDES-HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL 179
Score = 42 (19.8 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 13/49 (26%), Positives = 19/49 (38%)
Query: 317 VWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWD 365
VW L + + +H + +S DGS S +DG WD
Sbjct: 176 VWNLANCK----LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWD 220
>UNIPROTKB|F1PLR0 [details] [associations]
symbol:GNB2L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2001244 "positive regulation of intrinsic
apoptotic signaling pathway" evidence=IEA] [GO:0051898 "negative
regulation of protein kinase B signaling cascade" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0050765
"negative regulation of phagocytosis" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0043547
"positive regulation of GTPase activity" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0032464 "positive regulation of
protein homooligomerization" evidence=IEA] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030971 "receptor tyrosine kinase
binding" evidence=IEA] [GO:0030496 "midbody" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=IEA] [GO:0019903
"protein phosphatase binding" evidence=IEA] [GO:0008656
"cysteine-type endopeptidase activator activity involved in
apoptotic process" evidence=IEA] [GO:0008200 "ion channel inhibitor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=IEA] [GO:0001891 "phagocytic cup" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0048471 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547
GO:GO:0043025 GO:GO:0030425 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0043065 GO:GO:0051726 GO:GO:0001891 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 GO:GO:2001244 GO:GO:0032464 GO:GO:0030292 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 EMBL:AAEX03007665
ProteinModelPortal:F1PLR0 Ensembl:ENSCAFT00000020233 Uniprot:F1PLR0
Length = 317
Score = 130 (50.8 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 33/110 (30%), Positives = 54/110 (49%)
Query: 96 DGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRL 155
DG F ++G +G +R+ D++ + FVGH + + +VS S+D++++L
Sbjct: 74 DG-QFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQ-IVSGSRDKTIKL 131
Query: 156 WNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRI-ASCGMDNTVKIWSM 204
WN G+C H V V F P+ I SCG D VK+W++
Sbjct: 132 WNT-LGVCKYTVQDES-HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL 179
Score = 42 (19.8 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 13/49 (26%), Positives = 19/49 (38%)
Query: 317 VWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWD 365
VW L + + +H + +S DGS S +DG WD
Sbjct: 176 VWNLANCK----LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWD 220
>UNIPROTKB|P63244 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9606 "Homo sapiens" [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007369 "gastrulation" evidence=IEA] [GO:0019048
"virus-host interaction" evidence=IEA] [GO:0048511 "rhythmic
process" evidence=IEA] [GO:0090003 "regulation of establishment of
protein localization to plasma membrane" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0043204 "perikaryon" evidence=IEA]
[GO:0005102 "receptor binding" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0019903 "protein phosphatase binding"
evidence=IPI] [GO:0030496 "midbody" evidence=IDA] [GO:0043025
"neuronal cell body" evidence=ISS] [GO:0042169 "SH2 domain binding"
evidence=IDA] [GO:0030971 "receptor tyrosine kinase binding"
evidence=IDA] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=IDA] [GO:0030308 "negative regulation of cell
growth" evidence=IDA] [GO:0051726 "regulation of cell cycle"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005080 "protein kinase C binding"
evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IDA] [GO:0015935 "small ribosomal
subunit" evidence=ISS] [GO:0030425 "dendrite" evidence=ISS]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=IDA] [GO:0032464 "positive
regulation of protein homooligomerization" evidence=IDA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IMP;IDA] [GO:0030335 "positive regulation of cell
migration" evidence=IDA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IDA] [GO:0001891 "phagocytic cup" evidence=IDA]
[GO:0050765 "negative regulation of phagocytosis" evidence=IMP]
[GO:0008200 "ion channel inhibitor activity" evidence=ISS]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:2001244 "positive regulation of
intrinsic apoptotic signaling pathway" evidence=IMP] [GO:0006919
"activation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=IMP] [GO:0051898 "negative regulation
of protein kinase B signaling cascade" evidence=IMP] [GO:0008656
"cysteine-type endopeptidase activator activity involved in
apoptotic process" evidence=IMP] [GO:0017148 "negative regulation
of translation" evidence=ISS] [GO:0061099 "negative regulation of
protein tyrosine kinase activity" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0048471
Pathway_Interaction_DB:igf1_pathway GO:GO:0019048 GO:GO:0005080
GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148 GO:GO:0043547
Pathway_Interaction_DB:syndecan_2_pathway GO:GO:0043025
GO:GO:0030425 GO:GO:0043204 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0048511 GO:GO:0007049
GO:GO:0043065 GO:GO:0051726 GO:GO:0001891 GO:GO:0042169
Pathway_Interaction_DB:tnfpathway GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0008656 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 Pathway_Interaction_DB:ar_tf_pathway GO:GO:0030971
GO:GO:0030178 GO:GO:2001244 GO:GO:0007369
Pathway_Interaction_DB:hif1apathway EMBL:CH471165 GO:GO:0032464
GO:GO:2000114 GO:GO:0051302 GO:GO:0051898 GO:GO:2000543
GO:GO:0030292 KO:K14753 OMA:IRVWQVM CTD:10399 HOVERGEN:HBG000277
ChiTaRS:GNB2L1 EMBL:M24194 EMBL:AY159316 EMBL:AY336089
EMBL:AK095666 EMBL:CR456978 EMBL:CR541909 EMBL:AK222488
EMBL:BC000214 EMBL:BC000366 EMBL:BC010119 EMBL:BC014256
EMBL:BC014788 EMBL:BC017287 EMBL:BC019093 EMBL:BC019362
EMBL:BC021993 EMBL:BC032006 IPI:IPI00848226 PIR:B33928
RefSeq:NP_006089.1 UniGene:Hs.5662 PDB:4AOW PDBsum:4AOW
ProteinModelPortal:P63244 SMR:P63244 IntAct:P63244 MINT:MINT-105673
STRING:P63244 PhosphoSite:P63244 DMDM:54037168
REPRODUCTION-2DPAGE:IPI00848226 REPRODUCTION-2DPAGE:P63244
PaxDb:P63244 PRIDE:P63244 DNASU:10399 Ensembl:ENST00000512805
GeneID:10399 KEGG:hsa:10399 UCSC:uc003mni.1 GeneCards:GC05M180663
HGNC:HGNC:4399 HPA:CAB004288 HPA:HPA021676 MIM:176981
neXtProt:NX_P63244 PharmGKB:PA28779 InParanoid:P63244
GenomeRNAi:10399 NextBio:39404 ArrayExpress:P63244 Bgee:P63244
CleanEx:HS_GNB2L1 Genevestigator:P63244 GermOnline:ENSG00000204628
GO:GO:0015935 Uniprot:P63244
Length = 317
Score = 130 (50.8 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 33/110 (30%), Positives = 54/110 (49%)
Query: 96 DGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRL 155
DG F ++G +G +R+ D++ + FVGH + + +VS S+D++++L
Sbjct: 74 DG-QFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQ-IVSGSRDKTIKL 131
Query: 156 WNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRI-ASCGMDNTVKIWSM 204
WN G+C H V V F P+ I SCG D VK+W++
Sbjct: 132 WNT-LGVCKYTVQDES-HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL 179
Score = 42 (19.8 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 13/49 (26%), Positives = 19/49 (38%)
Query: 317 VWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWD 365
VW L + + +H + +S DGS S +DG WD
Sbjct: 176 VWNLANCK----LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWD 220
>UNIPROTKB|P63246 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9823 "Sus scrofa" [GO:0061099 "negative
regulation of protein tyrosine kinase activity" evidence=ISS]
[GO:0005080 "protein kinase C binding" evidence=ISS] [GO:0030496
"midbody" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0001891 "phagocytic cup"
evidence=ISS] [GO:0042169 "SH2 domain binding" evidence=ISS]
[GO:0030971 "receptor tyrosine kinase binding" evidence=ISS]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0050765 "negative regulation of phagocytosis" evidence=ISS]
[GO:0043547 "positive regulation of GTPase activity" evidence=ISS]
[GO:0043065 "positive regulation of apoptotic process"
evidence=ISS] [GO:0032464 "positive regulation of protein
homooligomerization" evidence=ISS] [GO:0032436 "positive regulation
of proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0030335 "positive regulation of cell migration"
evidence=ISS] [GO:0030308 "negative regulation of cell growth"
evidence=ISS] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:0051302
"regulation of cell division" evidence=ISS] [GO:0032880 "regulation
of protein localization" evidence=ISS] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] [GO:0043204
"perikaryon" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0048511 "rhythmic
process" evidence=IEA] [GO:0007369 "gastrulation" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=IEA] [GO:0006417 "regulation of translation"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0006417 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
GO:GO:0043547 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032880 GO:GO:0048511
GO:GO:0007049 GO:GO:0043065 GO:GO:0051726 GO:GO:0001891
GO:GO:0042169 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0030971 GO:GO:0030178
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 KO:K14753 CTD:10399 HOVERGEN:HBG000277
EMBL:Z33879 EMBL:AF146043 PIR:S45054 RefSeq:NP_999497.1
UniGene:Ssc.12515 ProteinModelPortal:P63246 SMR:P63246 PRIDE:P63246
GeneID:397605 KEGG:ssc:397605 Uniprot:P63246
Length = 317
Score = 130 (50.8 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 33/110 (30%), Positives = 54/110 (49%)
Query: 96 DGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRL 155
DG F ++G +G +R+ D++ + FVGH + + +VS S+D++++L
Sbjct: 74 DG-QFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQ-IVSGSRDKTIKL 131
Query: 156 WNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRI-ASCGMDNTVKIWSM 204
WN G+C H V V F P+ I SCG D VK+W++
Sbjct: 132 WNT-LGVCKYTVQDES-HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL 179
Score = 42 (19.8 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 13/49 (26%), Positives = 19/49 (38%)
Query: 317 VWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWD 365
VW L + + +H + +S DGS S +DG WD
Sbjct: 176 VWNLANCK----LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWD 220
>UNIPROTKB|B1N1C2 [details] [associations]
symbol:GNB2L1 "Uncharacterized protein" species:9103
"Meleagris gallopavo" [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005737
GO:GO:0048471 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547 GO:GO:0043025
GO:GO:0030425 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:2001244 GO:GO:0032464 GO:GO:0030292 KO:K14753 OMA:IRVWQVM
CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
EMBL:DQ993255 RefSeq:XP_003211191.1 UniGene:Mga.4509
ProteinModelPortal:B1N1C2 SMR:B1N1C2 PRIDE:B1N1C2
Ensembl:ENSMGAT00000000634 GeneID:100541375 KEGG:mgp:100541375
Uniprot:B1N1C2
Length = 317
Score = 130 (50.8 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 33/110 (30%), Positives = 54/110 (49%)
Query: 96 DGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRL 155
DG F ++G +G +R+ D++ + FVGH + + +VS S+D++++L
Sbjct: 74 DG-QFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQ-IVSGSRDKTIKL 131
Query: 156 WNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRI-ASCGMDNTVKIWSM 204
WN G+C H V V F P+ I SCG D VK+W++
Sbjct: 132 WNT-LGVCKYTVQDES-HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL 179
Score = 42 (19.8 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 13/49 (26%), Positives = 19/49 (38%)
Query: 317 VWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWD 365
VW L + + +H + +S DGS S +DG WD
Sbjct: 176 VWNLANCK----LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWD 220
>UNIPROTKB|Q4R7Y4 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9541 "Macaca fascicularis" [GO:0001891
"phagocytic cup" evidence=ISS] [GO:0001934 "positive regulation of
protein phosphorylation" evidence=ISS] [GO:0005080 "protein kinase
C binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=ISS]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=ISS] [GO:0030308 "negative regulation of cell growth"
evidence=ISS] [GO:0030335 "positive regulation of cell migration"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0030971
"receptor tyrosine kinase binding" evidence=ISS] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=ISS] [GO:0032880
"regulation of protein localization" evidence=ISS] [GO:0042169 "SH2
domain binding" evidence=ISS] [GO:0043025 "neuronal cell body"
evidence=ISS] [GO:0043065 "positive regulation of apoptotic
process" evidence=ISS] [GO:0043547 "positive regulation of GTPase
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0050765 "negative regulation of
phagocytosis" evidence=ISS] [GO:0051302 "regulation of cell
division" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISS] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:2000543 "positive
regulation of gastrulation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0048471
GO:GO:0006915 GO:GO:0005080 GO:GO:0006417 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0043547 GO:GO:0043025
GO:GO:0030425 GO:GO:0043204 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032880 GO:GO:0048511 GO:GO:0007049 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0042169 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0030971 GO:GO:0030178 GO:GO:0007369 GO:GO:0032464
GO:GO:2000114 GO:GO:0051302 GO:GO:2000543 GO:GO:0030292
HOVERGEN:HBG000277 EMBL:AB168677 ProteinModelPortal:Q4R7Y4
SMR:Q4R7Y4 PRIDE:Q4R7Y4 Uniprot:Q4R7Y4
Length = 317
Score = 130 (50.8 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 33/110 (30%), Positives = 54/110 (49%)
Query: 96 DGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRL 155
DG F ++G +G +R+ D++ + FVGH + + +VS S+D++++L
Sbjct: 74 DG-QFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQ-IVSGSRDKTIKL 131
Query: 156 WNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRI-ASCGMDNTVKIWSM 204
WN G+C H V V F P+ I SCG D VK+W++
Sbjct: 132 WNT-LGVCKYTVQDES-HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL 179
Score = 42 (19.8 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 13/49 (26%), Positives = 19/49 (38%)
Query: 317 VWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWD 365
VW L + + +H + +S DGS S +DG WD
Sbjct: 176 VWNLANCK----LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWD 220
>UNIPROTKB|Q5U275 [details] [associations]
symbol:gnb2l1 "LOC495666 protein" species:8355 "Xenopus
laevis" [GO:0005737 "cytoplasm" evidence=ISS] [GO:0043025 "neuronal
cell body" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 KO:K14753 HOVERGEN:HBG000277 EMBL:BC086231
RefSeq:NP_001088625.1 UniGene:Xl.49445 ProteinModelPortal:Q5U275
SMR:Q5U275 PRIDE:Q5U275 GeneID:495666 KEGG:xla:495666
Xenbase:XB-GENE-5927586 Uniprot:Q5U275
Length = 317
Score = 130 (50.8 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 33/110 (30%), Positives = 54/110 (49%)
Query: 96 DGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRL 155
DG F ++G +G +R+ D++ + FVGH + + +VS S+D++++L
Sbjct: 74 DG-QFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQ-IVSGSRDKTIKL 131
Query: 156 WNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRI-ASCGMDNTVKIWSM 204
WN G+C H V V F P+ I SCG D VK+W++
Sbjct: 132 WNT-LGVCKYTVQDES-HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL 179
Score = 42 (19.8 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 13/49 (26%), Positives = 19/49 (38%)
Query: 317 VWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWD 365
VW L + + +H + +S DGS S +DG WD
Sbjct: 176 VWNLANCK----LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWD 220
>MGI|MGI:101849 [details] [associations]
symbol:Gnb2l1 "guanine nucleotide binding protein (G
protein), beta polypeptide 2 like 1" species:10090 "Mus musculus"
[GO:0001891 "phagocytic cup" evidence=ISO] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISO] [GO:0004872
"receptor activity" evidence=ISA] [GO:0005080 "protein kinase C
binding" evidence=ISO;ISA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0008104 "protein localization"
evidence=ISA] [GO:0008200 "ion channel inhibitor activity"
evidence=IDA] [GO:0008656 "cysteine-type endopeptidase activator
activity involved in apoptotic process" evidence=ISO] [GO:0015935
"small ribosomal subunit" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=ISO] [GO:0030308 "negative regulation of cell
growth" evidence=ISO] [GO:0030335 "positive regulation of cell
migration" evidence=ISO] [GO:0030425 "dendrite" evidence=IDA]
[GO:0030496 "midbody" evidence=ISO] [GO:0030971 "receptor tyrosine
kinase binding" evidence=ISO] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0032464 "positive regulation of protein
homooligomerization" evidence=ISO] [GO:0035556 "intracellular
signal transduction" evidence=ISA] [GO:0040008 "regulation of
growth" evidence=IEA] [GO:0042169 "SH2 domain binding"
evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0043065
"positive regulation of apoptotic process" evidence=ISO]
[GO:0043547 "positive regulation of GTPase activity" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0050765 "negative
regulation of phagocytosis" evidence=ISO] [GO:0051726 "regulation
of cell cycle" evidence=ISO] [GO:0051898 "negative regulation of
protein kinase B signaling cascade" evidence=ISO] [GO:0061099
"negative regulation of protein tyrosine kinase activity"
evidence=ISO] [GO:0090003 "regulation of establishment of protein
localization to plasma membrane" evidence=ISO] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:101849 GO:GO:0005634 GO:GO:0048471
GO:GO:0006915 GO:GO:0005080 GO:GO:0008104 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148 GO:GO:0043547
GO:GO:0035556 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004872
GO:GO:0032880 GO:GO:0048511 GO:GO:0007049 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0042169 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 GO:GO:0030971 GO:GO:0030178 GO:GO:2001244
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 EMBL:CH466575
GO:GO:0051302 GO:GO:2000543 GO:GO:0030292 KO:K14753 OMA:IRVWQVM
CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
OrthoDB:EOG4933J5 ChiTaRS:GNB2L1 GO:GO:0015935 EMBL:D29802
EMBL:X75313 EMBL:AK002493 EMBL:AK012242 EMBL:AK017772 EMBL:AK051226
EMBL:AK159797 EMBL:AK160528 EMBL:AK160739 EMBL:AK161234
EMBL:AK166417 EMBL:AK166786 EMBL:AK166800 EMBL:AK166889
EMBL:AK166945 EMBL:AK168086 EMBL:AK168096 EMBL:AK168196
EMBL:AK168349 EMBL:AL645849 EMBL:BC046760 EMBL:AF295529
IPI:IPI00317740 PIR:S38398 RefSeq:NP_032169.1 UniGene:Mm.5305
ProteinModelPortal:P68040 SMR:P68040 IntAct:P68040 STRING:P68040
REPRODUCTION-2DPAGE:P68040 SWISS-2DPAGE:P68040 PaxDb:P68040
PRIDE:P68040 Ensembl:ENSMUST00000020640 GeneID:14694 KEGG:mmu:14694
UCSC:uc007ipa.1 InParanoid:Q9CSQ0 NextBio:286639 Bgee:P68040
Genevestigator:P68040 GermOnline:ENSMUSG00000020372 Uniprot:P68040
Length = 317
Score = 130 (50.8 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 33/110 (30%), Positives = 54/110 (49%)
Query: 96 DGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRL 155
DG F ++G +G +R+ D++ + FVGH + + +VS S+D++++L
Sbjct: 74 DG-QFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQ-IVSGSRDKTIKL 131
Query: 156 WNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRI-ASCGMDNTVKIWSM 204
WN G+C H V V F P+ I SCG D VK+W++
Sbjct: 132 WNT-LGVCKYTVQDES-HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL 179
Score = 42 (19.8 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 13/49 (26%), Positives = 19/49 (38%)
Query: 317 VWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWD 365
VW L + + +H + +S DGS S +DG WD
Sbjct: 176 VWNLANCK----LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWD 220
>RGD|69229 [details] [associations]
symbol:Gnb2l1 "guanine nucleotide binding protein (G protein),
beta polypeptide 2 like 1" species:10116 "Rattus norvegicus"
[GO:0001891 "phagocytic cup" evidence=ISO;ISS] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISO;ISS] [GO:0005080
"protein kinase C binding" evidence=IC;ISO;IDA] [GO:0005634
"nucleus" evidence=ISO;ISS] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0006919 "activation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=ISO] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0007205 "protein kinase C-activating
G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0007369 "gastrulation" evidence=IEA] [GO:0008200 "ion channel
inhibitor activity" evidence=IEA;ISO] [GO:0008656 "cysteine-type
endopeptidase activator activity involved in apoptotic process"
evidence=IEA;ISO] [GO:0015935 "small ribosomal subunit"
evidence=IDA] [GO:0017148 "negative regulation of translation"
evidence=IMP] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0030178 "negative regulation of Wnt receptor
signaling pathway" evidence=ISS] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=ISO;ISS] [GO:0030308 "negative
regulation of cell growth" evidence=ISO;ISS] [GO:0030335 "positive
regulation of cell migration" evidence=ISO;ISS] [GO:0030425
"dendrite" evidence=IEA;ISO] [GO:0030496 "midbody" evidence=ISO;ISS]
[GO:0030971 "receptor tyrosine kinase binding" evidence=ISO;ISS]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0032464 "positive
regulation of protein homooligomerization" evidence=ISO;ISS]
[GO:0032880 "regulation of protein localization" evidence=ISS]
[GO:0042169 "SH2 domain binding" evidence=ISO;ISS] [GO:0043025
"neuronal cell body" evidence=ISO;ISS] [GO:0043065 "positive
regulation of apoptotic process" evidence=ISO;ISS] [GO:0043204
"perikaryon" evidence=IEA] [GO:0043547 "positive regulation of
GTPase activity" evidence=ISO;ISS] [GO:0048471 "perinuclear region
of cytoplasm" evidence=ISO;ISS] [GO:0048511 "rhythmic process"
evidence=IEA] [GO:0050765 "negative regulation of phagocytosis"
evidence=ISO;ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISO;ISS] [GO:0051898 "negative regulation of protein kinase
B signaling cascade" evidence=IEA;ISO] [GO:0061099 "negative
regulation of protein tyrosine kinase activity" evidence=ISO]
[GO:0090003 "regulation of establishment of protein localization to
plasma membrane" evidence=IMP] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:2000543 "positive
regulation of gastrulation" evidence=ISS] [GO:2001244 "positive
regulation of intrinsic apoptotic signaling pathway"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:69229 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148
GO:GO:0043547 GO:GO:0007205 GO:GO:0043025 GO:GO:0030425
GO:GO:0043204 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 GO:GO:0007049 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0042169 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:0090003 GO:GO:0030971 GO:GO:0030178 GO:GO:2001244
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753 CTD:10399
GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277 OrthoDB:EOG4933J5
GO:GO:0015935 EMBL:U03390 EMBL:BC063809 IPI:IPI00231134 PIR:A36986
RefSeq:NP_570090.2 RefSeq:XP_003751228.1 UniGene:Rn.55487
ProteinModelPortal:P63245 SMR:P63245 IntAct:P63245 MINT:MINT-4095812
STRING:P63245 PhosphoSite:P63245 PRIDE:P63245
Ensembl:ENSRNOT00000003334 GeneID:100911540 GeneID:83427
KEGG:rno:100911540 KEGG:rno:83427 UCSC:RGD:69229 InParanoid:P63245
NextBio:615845 Genevestigator:P63245 GermOnline:ENSRNOG00000002390
Uniprot:P63245
Length = 317
Score = 130 (50.8 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 33/110 (30%), Positives = 54/110 (49%)
Query: 96 DGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRL 155
DG F ++G +G +R+ D++ + FVGH + + +VS S+D++++L
Sbjct: 74 DG-QFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQ-IVSGSRDKTIKL 131
Query: 156 WNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRI-ASCGMDNTVKIWSM 204
WN G+C H V V F P+ I SCG D VK+W++
Sbjct: 132 WNT-LGVCKYTVQDES-HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL 179
Score = 42 (19.8 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 13/49 (26%), Positives = 19/49 (38%)
Query: 317 VWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWD 365
VW L + + +H + +S DGS S +DG WD
Sbjct: 176 VWNLANCK----LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWD 220
>CGD|CAL0005039 [details] [associations]
symbol:orf19.3467 species:5476 "Candida albicans" [GO:0030126
"COPI vesicle coat" evidence=IEA] [GO:0032511 "late endosome to
vacuole transport via multivesicular body sorting pathway"
evidence=IEA] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 CGD:CAL0005039
GO:GO:0006886 GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000155
EMBL:AACQ01000154 InterPro:IPR016453 PIRSF:PIRSF005567
RefSeq:XP_712507.1 RefSeq:XP_712537.1 ProteinModelPortal:Q59S73
STRING:Q59S73 GeneID:3645845 GeneID:3645870 KEGG:cal:CaO19.10971
KEGG:cal:CaO19.3467 Uniprot:Q59S73
Length = 939
Score = 140 (54.3 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 37/106 (34%), Positives = 56/106 (52%)
Query: 100 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 159
++V G + IRV + + + F H D I I P KP ++ S S D +++LWN
Sbjct: 69 WIVVGSDDFQIRVYNYNTGEKVTQFEAHPDYIRSIAVHPSKPYILTS-SDDLTIKLWNWD 127
Query: 160 TGICI-LIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
+ F G H++ V+SV+F+P D AS +D TVKIWS+
Sbjct: 128 HNWKLEQTFEG---HQHYVMSVNFNPKDPNTFASACLDRTVKIWSL 170
>UNIPROTKB|G8JL27 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9031 "Gallus gallus" [GO:0001891 "phagocytic
cup" evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=IEA] [GO:0019903 "protein
phosphatase binding" evidence=IEA] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0030971
"receptor tyrosine kinase binding" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0050765 "negative regulation of
phagocytosis" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:2001244 "positive regulation
of intrinsic apoptotic signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 EMBL:AADN02030122
Ensembl:ENSGALT00000000171 Uniprot:G8JL27
Length = 320
Score = 130 (50.8 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 33/110 (30%), Positives = 54/110 (49%)
Query: 96 DGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRL 155
DG F ++G +G +R+ D++ + FVGH + + +VS S+D++++L
Sbjct: 77 DG-QFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQ-IVSGSRDKTIKL 134
Query: 156 WNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRI-ASCGMDNTVKIWSM 204
WN G+C H V V F P+ I SCG D VK+W++
Sbjct: 135 WNT-LGVCKYTVQDES-HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL 182
Score = 42 (19.8 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 13/49 (26%), Positives = 19/49 (38%)
Query: 317 VWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWD 365
VW L + + +H + +S DGS S +DG WD
Sbjct: 179 VWNLANCK----LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWD 223
>FB|FBgn0027518 [details] [associations]
symbol:CG7609 species:7227 "Drosophila melanogaster"
[GO:0007031 "peroxisome organization" evidence=ISS] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=ISS]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0005777 "peroxisome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 GO:GO:0005777 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016558 GO:GO:0005053
PANTHER:PTHR22850:SF4 GeneTree:ENSGT00650000093352 OMA:HALYDSR
UniGene:Dm.3193 FlyBase:FBgn0027518 NextBio:834288 EMBL:AF132181
RefSeq:NP_651720.3 SMR:Q9XZ25 EnsemblMetazoa:FBtr0085543
GeneID:43505 KEGG:dme:Dmel_CG7609 UCSC:CG7609-RB InParanoid:Q9XZ25
GenomeRNAi:43505 Uniprot:Q9XZ25
Length = 776
Score = 139 (54.0 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 40/168 (23%), Positives = 89/168 (52%)
Query: 39 VVFNFIDSRYFNVFATVGGNRV-TVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDG 97
V ++ +DS N+ AT N V +V+ + G L Y + E + +TV++ +
Sbjct: 71 VAWSTLDS---NLLATAATNGVVSVWDLSKFGRQKQLLVY--NEHERTAHTVTFHSSEPN 125
Query: 98 IPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWN 157
I L++G +G I+ D+ ++K ++ + +S+ +++ P ++ + S++ +V+LW+
Sbjct: 126 I--LISGSQDGTIKCFDIRSDKSINTYFCNSESVRDVKFSPHTQNIFSAVSENGTVQLWD 183
Query: 158 VQT-GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
++ C++ F H V + D+HP+ + +A+ D +K+W+M
Sbjct: 184 MRKWDKCMVQFTA---HYGPVYTCDWHPTRNW-LATGSRDKQIKVWNM 227
>UNIPROTKB|Q9W7K9 [details] [associations]
symbol:SWiP-1 "SOCS box-containing WD protein SWiP-1"
species:9031 "Gallus gallus" [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567
GO:GO:0005622 GeneTree:ENSGT00700000104017 CTD:26118
HOGENOM:HOG000063727 HOVERGEN:HBG034543 KO:K10341 OMA:GHHNDVV
EMBL:AADN02025704 EMBL:AF072879 IPI:IPI00570763 RefSeq:NP_990203.1
UniGene:Gga.3758 STRING:Q9W7K9 Ensembl:ENSGALT00000009090
GeneID:395685 KEGG:gga:395685 InParanoid:Q9W7K9 NextBio:20815757
Uniprot:Q9W7K9
Length = 421
Score = 121 (47.7 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 32/109 (29%), Positives = 59/109 (54%)
Query: 101 LVAGGIN-GIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 159
L+A G+N G I++ DV KL + + H + + ++ P ++VSAS+D+++R+W+++
Sbjct: 142 LLATGLNNGRIKIWDVYTGKLLLNLMDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLK 201
Query: 160 T-GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEF 207
G + + G H+N V F P D + S G V +W M ++
Sbjct: 202 DDGNMMKVLRG---HQNWVYGCAFSP-DSSILCSVGASKAVFLWDMDKY 246
Score = 56 (24.8 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 31/140 (22%), Positives = 56/140 (40%)
Query: 239 HSNYVDCNRWL-GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPEC------- 290
H++ V C G + + S D + +W+P + G + +P P
Sbjct: 256 HNDVVACEFSPDGALLATASYDTRVYVWDPYI-----GVILREFGHLFPPPTPIFAGGAN 310
Query: 291 DIWF--IKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYD 348
D W + FS D + A+ ++ + W + PV +A L++ S D
Sbjct: 311 DRWVRSVSFSHDGLHIASLADDK--MVRFWRIDEEYPVQVAPLNNGLC------CTFSTD 362
Query: 349 GSTILSCCEDGAIWRWDAIP 368
GS + + +DG++ W A P
Sbjct: 363 GSVLAAGTQDGSVHFW-ATP 381
>FB|FBgn0010356 [details] [associations]
symbol:Taf5 "TBP-associated factor 5" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0005669 "transcription factor TFIID complex"
evidence=ISS;IDA;IPI] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] [GO:0000124 "SAGA complex"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AE013599
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0000124 GO:GO:0005669 GO:GO:0051123
GeneTree:ENSGT00700000104377 KO:K03130 EMBL:U06460 EMBL:AY051960
PIR:S33263 RefSeq:NP_476957.1 UniGene:Dm.19905
ProteinModelPortal:P49846 SMR:P49846 DIP:DIP-48906N STRING:P49846
PaxDb:P49846 PRIDE:P49846 EnsemblMetazoa:FBtr0088240 GeneID:47900
KEGG:dme:Dmel_CG7704 CTD:6877 FlyBase:FBgn0010356 InParanoid:P49846
OMA:ERQNNQI OrthoDB:EOG4F7M11 PhylomeDB:P49846 GenomeRNAi:47900
NextBio:839215 Bgee:P49846 GermOnline:CG7704 Uniprot:P49846
Length = 704
Score = 135 (52.6 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 48/208 (23%), Positives = 92/208 (44%)
Query: 12 VGSLTPSKKREYRVTNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNRVTVYQCLEGGVI 71
+ SLTP+K R + + L+E + + +D R V ++ G+ VY+C +
Sbjct: 403 IWSLTPAKLRTLKDADSLRELDKESADINVRMLDDRSGEVTRSLMGHTGPVYRCAFAPEM 462
Query: 72 AALQSYVDEDKEESFYTVSWAC------------NVDGIP---FLVAGGINGIIRVIDVS 116
L S ++ + ++W+C +V P + V+ + R+
Sbjct: 463 NLLLSCSEDSTIRLWSLLTWSCVVTYRGHVYPVWDVRFAPHGYYFVSCSYDKTARLWATD 522
Query: 117 NEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNE 176
+ + + FVGH ++ ++ P + V + S D +VRLW+ TG + + G H+
Sbjct: 523 SNQALRVFVGHLSDVDCVQFHP-NSNYVATGSSDRTVRLWDNMTGQSVRLMTG---HKGS 578
Query: 177 VLSVDFHPSDIYRIASCGMDNTVKIWSM 204
V S+ F Y +AS +D+ + IW +
Sbjct: 579 VSSLAFSACGRY-LASGSVDHNIIIWDL 605
Score = 47 (21.6 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 7/17 (41%), Positives = 13/17 (76%)
Query: 250 GDFILSKSVDNEIVLWE 266
G ++ S SVD+ I++W+
Sbjct: 588 GRYLASGSVDHNIIIWD 604
Score = 37 (18.1 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 5/17 (29%), Positives = 10/17 (58%)
Query: 250 GDFILSKSVDNEIVLWE 266
G + + +DN + LW+
Sbjct: 630 GTVLAAAGLDNNLTLWD 646
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 132 (51.5 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 32/103 (31%), Positives = 55/103 (53%)
Query: 100 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 159
F+V+ + +++ DV L K+ +GH + + P + +++VS S DE+VR+W+V
Sbjct: 85 FIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNP-QSNMIVSGSFDETVRIWDVT 143
Query: 160 TGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIW 202
TG C+ + H + V +VDF+ D I S D +IW
Sbjct: 144 TGKCLKVLPA---HSDPVTAVDFN-RDGSLIVSSSYDGLCRIW 182
Score = 122 (48.0 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 30/109 (27%), Positives = 58/109 (53%)
Query: 100 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRT--QPLKPSLVVSASKDESVRLWN 157
F++ G ++ +R+ ++S+ K K++ GH ++ I + +VS S+D V +W
Sbjct: 212 FILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWE 271
Query: 158 VQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKE 206
+ + + GH V++V HP++ IAS +D TV+IW+ K+
Sbjct: 272 LNSK---KLLQKLEGHTETVMNVACHPTENL-IASGSLDKTVRIWTQKK 316
Score = 39 (18.8 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 250 GDFILSKSVDNEIVLWEPKMKE 271
G I+S S DN + +WE K+
Sbjct: 255 GKRIVSGSEDNCVHMWELNSKK 276
>DICTYBASE|DDB_G0279903 [details] [associations]
symbol:wdr12 "NLE domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0042273 "ribosomal large
subunit biogenesis" evidence=ISS] [GO:0005730 "nucleolus"
evidence=IEA;ISS] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0279903 GO:GO:0005654 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042273 GO:GO:0006364
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HAMAP:MF_03029
EMBL:AAFI02000034 RefSeq:XP_641483.1 ProteinModelPortal:Q54W52
STRING:Q54W52 EnsemblProtists:DDB0233985 GeneID:8622282
KEGG:ddi:DDB_G0279903 OMA:DCTINLW Uniprot:Q54W52
Length = 463
Score = 120 (47.3 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 44/142 (30%), Positives = 66/142 (46%)
Query: 71 IAALQSYVDEDKEESFYTVSWACNVDGIPF--LVAGGINGIIRVIDVSNEKLHKSFVGH- 127
I L++ + +E+ W VDG F +V+G + +RV E L + GH
Sbjct: 95 IEYLEAITEPKREKECQHDDWVSCVDGSNFGLVVSGSYDLGVRVWGYDGE-LISTGTGHL 153
Query: 128 -G-DSINEIRTQPLKPSLVVSASKDESVRLWNVQTGIC-ILIFAGAGGHRNEVLSVDFHP 184
G S+ I + VSAS D+++R+WN I A H + SV P
Sbjct: 154 AGVKSVCWISDKNADNLSFVSASMDKTLRVWNFNKSQSEIKALACLKEHTGTIESVYVSP 213
Query: 185 SDIYRIASCGMDNTVKIWSMKE 206
D RI S MD+T+K+WS+K+
Sbjct: 214 -DSSRIVSASMDSTIKLWSIKD 234
Score = 58 (25.5 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 33/138 (23%), Positives = 61/138 (44%)
Query: 235 IASV---HSNYVDCNRWLGDF-ILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPEC 290
+ASV +S V W F +LS S+D++I LW+ + D + P P
Sbjct: 281 LASVTVPNSQGVTVVNWTTQFQMLSGSMDSKIRLWDVSTLVAN------DTIPT-PAPLT 333
Query: 291 DIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGS 350
D+ +S + A +++ + +W+ +SS S K+ + T+++++ S
Sbjct: 334 DL---DYSMESGLIVTA--HKDRIVRIWDPRSSDETKSQTQSLISHKTWV--TSVNWNPS 386
Query: 351 TILSCCE---DGAIWRWD 365
+ CC DG + WD
Sbjct: 387 SKYHCCSTSHDGTVKYWD 404
>DICTYBASE|DDB_G0293070 [details] [associations]
symbol:DDB_G0293070 "TROVE domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA;ISS] [GO:0005697 "telomerase holoenzyme complex"
evidence=ISS] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008858
InterPro:IPR015943 Pfam:PF00400 Pfam:PF05731 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50988 SMART:SM00320
dictyBase:DDB_G0293070 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003723 EMBL:AAFI02000199
GO:GO:0005697 KO:K11127 InterPro:IPR025139 Pfam:PF13271
RefSeq:XP_629304.1 ProteinModelPortal:Q54CB5 PRIDE:Q54CB5
EnsemblProtists:DDB0237515 GeneID:8629027 KEGG:ddi:DDB_G0293070
InParanoid:Q54CB5 OMA:LPSDWIE ProtClustDB:CLSZ2429313
Uniprot:Q54CB5
Length = 2430
Score = 135 (52.6 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 31/108 (28%), Positives = 54/108 (50%)
Query: 99 PFLVAGGINGIIRVIDVSNEKLHKSFV---GHGDSINEIRTQPLKPSLVVSASKDESVRL 155
P L G + +R+ DVS+ +++ GH +I I P +L+ S S+D +++
Sbjct: 1796 PLLAVGATDCTVRLFDVSSNTIYREVAKLHGHTRAITSITFSP-SGNLIASTSEDLLIKV 1854
Query: 156 WNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWS 203
WNVQT A H + + + F+P++ + SC D + K+WS
Sbjct: 1855 WNVQTHKAEYTIEKA--HNDPINCISFNPTNECELISCSDDYSTKVWS 1900
Score = 65 (27.9 bits), Expect = 6.1e-06, Sum P(3) = 6.1e-06
Identities = 18/60 (30%), Positives = 27/60 (45%)
Query: 307 AIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDA 366
A + +G + +WE S+ A H K I Q S DG + +C +D + WDA
Sbjct: 2121 ASSSDDGTVKLWEFNSATATTSA---H---KGSINQCVFSKDGKYVATCGQDCVLNIWDA 2174
Score = 58 (25.5 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 19/76 (25%), Positives = 36/76 (47%)
Query: 293 WFIKFSCDFHYNAAAI--GNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGS 350
W + F C F ++ + G + + VW +++ +L + H+ S I + + D
Sbjct: 1958 W-VNF-CTFSPDSKKLVSGGWDFNLRVWNIKTQKELLCLK-GHSSS---IEKAFFTKDQK 2011
Query: 351 TILSCCEDGAIWRWDA 366
I+S DG++ WDA
Sbjct: 2012 YIISASFDGSVKVWDA 2027
Score = 37 (18.1 bits), Expect = 6.1e-06, Sum P(3) = 6.1e-06
Identities = 8/30 (26%), Positives = 17/30 (56%)
Query: 239 HSNYVDCNRWLGD--FILSKSVDNEIVLWE 266
HS+ ++ + D +I+S S D + +W+
Sbjct: 1997 HSSSIEKAFFTKDQKYIISASFDGSVKVWD 2026
>TAIR|locus:2154438 [details] [associations]
symbol:AT5G23430 "AT5G23430" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0005874
GO:GO:0080008 EMBL:AB018110 EMBL:BT002053 IPI:IPI00519668
IPI:IPI00532083 RefSeq:NP_197734.2 RefSeq:NP_851064.1
UniGene:At.45963 ProteinModelPortal:Q8H0T9 SMR:Q8H0T9 IntAct:Q8H0T9
PaxDb:Q8H0T9 PRIDE:Q8H0T9 EnsemblPlants:AT5G23430.1 GeneID:832409
KEGG:ath:AT5G23430 GeneFarm:2999 TAIR:At5g23430
HOGENOM:HOG000008039 InParanoid:Q8H0T9 OMA:DFKCHEG PhylomeDB:Q8H0T9
ProtClustDB:CLSN2717628 Genevestigator:Q8H0T9 GermOnline:AT5G23430
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 Uniprot:Q8H0T9
Length = 837
Score = 138 (53.6 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 29/108 (26%), Positives = 56/108 (51%)
Query: 100 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 159
F +G ++ +++ D+ + ++ GH +N +R P VVS +D V++W++
Sbjct: 115 FFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTP-DGRWVVSGGEDNIVKVWDLT 173
Query: 160 TGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEF 207
G + F H ++ S+DFHP + + +A+ D TVK W ++ F
Sbjct: 174 AGKLLTEFKS---HEGQIQSLDFHPHE-FLLATGSADRTVKFWDLETF 217
>CGD|CAL0000124 [details] [associations]
symbol:ASC1 species:5476 "Candida albicans" [GO:0005092
"GDP-dissociation inhibitor activity" evidence=IGI;ISA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IGI;ISA]
[GO:0007155 "cell adhesion" evidence=IMP] [GO:0001403 "invasive
growth in response to glucose limitation" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0022627 "cytosolic small ribosomal
subunit" evidence=IEA] [GO:0071216 "cellular response to biotic
stimulus" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0036244 "cellular response to neutral pH"
evidence=IMP] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:0036178 "filamentous growth of a population of unicellular
organisms in response to neutral pH" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0010255 "glucose mediated
signaling pathway" evidence=IEA] [GO:0032995 "regulation of
fungal-type cell wall biogenesis" evidence=IEA] [GO:0031139
"positive regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0032956 "regulation of actin cytoskeleton
organization" evidence=IEA] [GO:0017148 "negative regulation of
translation" evidence=IEA] [GO:0034613 "cellular protein
localization" evidence=IEA] [GO:0043022 "ribosome binding"
evidence=IEA] [GO:0005080 "protein kinase C binding" evidence=IEA]
[GO:0001965 "G-protein alpha-subunit binding" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0000124 GO:GO:0005737 GO:GO:0071216 GO:GO:0036244
GO:GO:0036180 GO:GO:0036178 GO:GO:0009405 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007155 GO:GO:0007186
GO:GO:0009267 EMBL:AP006852 GO:GO:0001403 GO:GO:0036170
EMBL:AACQ01000156 RefSeq:XP_712478.1 RefSeq:XP_888749.1
ProteinModelPortal:P83774 STRING:Q59S46 COMPLUYEAST-2DPAGE:P83774
GeneID:3645907 GeneID:3704151 KEGG:cal:CaO19.6906
KEGG:cal:CaO19_6906 GO:GO:0005092 Uniprot:P83774
Length = 317
Score = 125 (49.1 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 35/116 (30%), Positives = 62/116 (53%)
Query: 94 NVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGH-GDSINEIRTQPLKPSLVVSASKDES 152
+ DG + ++ + +R+ D+ + + FVGH GD ++ + L+ +VSAS+D++
Sbjct: 75 SADGA-YALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKNLRQ--IVSASRDKT 131
Query: 153 VRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSD-IYRIASCGMDNTVKIWSMKEF 207
V++WN G C+ A GH + V +V PSD + S D TVK W + ++
Sbjct: 132 VKVWNT-IGECM---ATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLADY 183
Score = 124 (48.7 bits), Expect = 8.0e-06, Sum P(2) = 8.0e-06
Identities = 29/82 (35%), Positives = 46/82 (56%)
Query: 122 KSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVD 181
KSF GH + ++ T + +SAS D ++RLW+++TG F G H+ +VLSV
Sbjct: 60 KSFKGHSHIVQDV-TISADGAYALSASWDRTLRLWDLETGETTQRFVG---HKGDVLSVS 115
Query: 182 FHPSDIYRIASCGMDNTVKIWS 203
++ +I S D TVK+W+
Sbjct: 116 I-AKNLRQIVSASRDKTVKVWN 136
Score = 46 (21.3 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 345 MSYDGSTILSCCEDGAIWRWD 365
+S DGS S +DG I WD
Sbjct: 201 LSPDGSLCASAGKDGVIILWD 221
>UNIPROTKB|P83774 [details] [associations]
symbol:ASC1 "Guanine nucleotide-binding protein subunit
beta-like protein" species:237561 "Candida albicans SC5314"
[GO:0001403 "invasive growth in response to glucose limitation"
evidence=IMP] [GO:0005092 "GDP-dissociation inhibitor activity"
evidence=ISA] [GO:0007155 "cell adhesion" evidence=IMP] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISA]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009405 "pathogenesis" evidence=IMP] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0036170 "filamentous growth of a
population of unicellular organisms in response to starvation"
evidence=IMP] [GO:0036178 "filamentous growth of a population of
unicellular organisms in response to neutral pH" evidence=IMP]
[GO:0036180 "filamentous growth of a population of unicellular
organisms in response to biotic stimulus" evidence=IMP] [GO:0036244
"cellular response to neutral pH" evidence=IMP] [GO:0071216
"cellular response to biotic stimulus" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0000124 GO:GO:0005737 GO:GO:0071216 GO:GO:0036244
GO:GO:0036180 GO:GO:0036178 GO:GO:0009405 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007155 GO:GO:0007186
GO:GO:0009267 EMBL:AP006852 GO:GO:0001403 GO:GO:0036170
EMBL:AACQ01000156 RefSeq:XP_712478.1 RefSeq:XP_888749.1
ProteinModelPortal:P83774 STRING:Q59S46 COMPLUYEAST-2DPAGE:P83774
GeneID:3645907 GeneID:3704151 KEGG:cal:CaO19.6906
KEGG:cal:CaO19_6906 GO:GO:0005092 Uniprot:P83774
Length = 317
Score = 125 (49.1 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 35/116 (30%), Positives = 62/116 (53%)
Query: 94 NVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGH-GDSINEIRTQPLKPSLVVSASKDES 152
+ DG + ++ + +R+ D+ + + FVGH GD ++ + L+ +VSAS+D++
Sbjct: 75 SADGA-YALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKNLRQ--IVSASRDKT 131
Query: 153 VRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSD-IYRIASCGMDNTVKIWSMKEF 207
V++WN G C+ A GH + V +V PSD + S D TVK W + ++
Sbjct: 132 VKVWNT-IGECM---ATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLADY 183
Score = 124 (48.7 bits), Expect = 8.0e-06, Sum P(2) = 8.0e-06
Identities = 29/82 (35%), Positives = 46/82 (56%)
Query: 122 KSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVD 181
KSF GH + ++ T + +SAS D ++RLW+++TG F G H+ +VLSV
Sbjct: 60 KSFKGHSHIVQDV-TISADGAYALSASWDRTLRLWDLETGETTQRFVG---HKGDVLSVS 115
Query: 182 FHPSDIYRIASCGMDNTVKIWS 203
++ +I S D TVK+W+
Sbjct: 116 I-AKNLRQIVSASRDKTVKVWN 136
Score = 46 (21.3 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 345 MSYDGSTILSCCEDGAIWRWD 365
+S DGS S +DG I WD
Sbjct: 201 LSPDGSLCASAGKDGVIILWD 221
>SGD|S000004722 [details] [associations]
symbol:ASC1 "G-protein beta subunit and guanine nucleotide
dissociation inhibitor" species:4932 "Saccharomyces cerevisiae"
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0004871 "signal
transducer activity" evidence=IMP;IPI] [GO:0001403 "invasive growth
in response to glucose limitation" evidence=IMP] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IDA] [GO:0017148
"negative regulation of translation" evidence=IMP] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IMP;IPI]
[GO:0001965 "G-protein alpha-subunit binding" evidence=IPI]
[GO:0005092 "GDP-dissociation inhibitor activity" evidence=IDA]
[GO:0010255 "glucose mediated signaling pathway" evidence=IMP;IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000004722 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0017148 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 EMBL:BK006946 GO:GO:0004871
GO:GO:0001403 EMBL:Z49702 GO:GO:0022627 GO:GO:0010255
HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 GO:GO:0005092 OrthoDB:EOG437VPP
PIR:S54578 RefSeq:NP_013834.1 PDB:1TRJ PDB:3FRX PDB:3IZB PDB:3O2Z
PDB:3O30 PDB:3RFG PDB:3RFH PDB:3U5C PDB:3U5G PDBsum:1TRJ
PDBsum:3FRX PDBsum:3IZB PDBsum:3O2Z PDBsum:3O30 PDBsum:3RFG
PDBsum:3RFH PDBsum:3U5C PDBsum:3U5G ProteinModelPortal:P38011
SMR:P38011 DIP:DIP-6465N IntAct:P38011 MINT:MINT-652105
STRING:P38011 UCD-2DPAGE:P38011 PaxDb:P38011 PeptideAtlas:P38011
EnsemblFungi:YMR116C GeneID:855143 KEGG:sce:YMR116C
EvolutionaryTrace:P38011 NextBio:978537 Genevestigator:P38011
GermOnline:YMR116C Uniprot:P38011
Length = 319
Score = 126 (49.4 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 31/122 (25%), Positives = 62/122 (50%)
Query: 96 DGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRL 155
DG + ++ + +R+ DV+ + ++ FVGH + + K S+++S S+D+++++
Sbjct: 76 DGA-YALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDK-KASMIISGSRDKTIKV 133
Query: 156 WNVQTGICILIFAGAGGHRNEVLSVDFHPSD--IYRIASCGMDNTVKIWSMKEFWTYVEK 213
W ++ G C+ G ++V V +D I S G D VK W++ +F +E
Sbjct: 134 WTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQF--QIEA 190
Query: 214 SF 215
F
Sbjct: 191 DF 192
Score = 118 (46.6 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 29/84 (34%), Positives = 46/84 (54%)
Query: 122 KSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVD 181
+SF GH + + T + +SAS D+++RLW+V TG F G H+++V+SVD
Sbjct: 59 RSFKGHSHIVQDC-TLTADGAYALSASWDKTLRLWDVATGETYQRFVG---HKSDVMSVD 114
Query: 182 FHPSDIYRIASCGMDNTVKIWSMK 205
I S D T+K+W++K
Sbjct: 115 IDKK-ASMIISGSRDKTIKVWTIK 137
Score = 45 (20.9 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 338 SPIRQTAMSYDGSTILSCCEDGAIWRWD 365
S I S DG+ I S +DG I W+
Sbjct: 197 SNINTLTASPDGTLIASAGKDGEIMLWN 224
Score = 45 (20.9 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 28/120 (23%), Positives = 48/120 (40%)
Query: 250 GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIG 309
G I S D EI+LW K+ D +++ + FS + ++ AAA
Sbjct: 208 GTLIASAGKDGEIMLWNLAAKKAMYTLSAQD----------EVFSLAFSPNRYWLAAATA 257
Query: 310 NREGKIFVWELQSSPPVLIARLS-HAQSKSPIRQT-AMSYDGSTILSCCEDGAIWRWDAI 367
K+F + Q L + ++++ P + A S DG T+ + D I W +
Sbjct: 258 TGI-KVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVM 316
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 136 (52.9 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 32/104 (30%), Positives = 56/104 (53%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
+VAG +G IRV D+ K+ ++ +GH +I + P V S S+D +++LW+++
Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYG-EFVASGSQDTNIKLWDIRR 136
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
C+ + G H V + F P + +AS D+TVK+W +
Sbjct: 137 KGCVFRYRG---HSQAVRCLRFSPDGKW-LASAADDHTVKLWDL 176
Score = 135 (52.6 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 33/118 (27%), Positives = 62/118 (52%)
Query: 93 CNVDGIP---FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASK 149
C++D P F+ +G + I++ D+ + + GH ++ +R P + SA+
Sbjct: 109 CSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSP-DGKWLASAAD 167
Query: 150 DESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEF 207
D +V+LW++ G + F G H V V+FHP++ Y +AS D T++ W +++F
Sbjct: 168 DHTVKLWDLTAGKMMSEFPG---HTGPVNVVEFHPNE-YLLASGSSDRTIRFWDLEKF 221
>RGD|620575 [details] [associations]
symbol:Apaf1 "apoptotic peptidase activating factor 1"
species:10116 "Rattus norvegicus" [GO:0001666 "response to hypoxia"
evidence=IEP] [GO:0001843 "neural tube closure" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
[GO:0006309 "apoptotic DNA fragmentation" evidence=ISO] [GO:0006917
"induction of apoptosis" evidence=IDA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0006952 "defense response" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISO]
[GO:0007420 "brain development" evidence=ISO;IEP] [GO:0007568
"aging" evidence=IEP] [GO:0007584 "response to nutrient"
evidence=IEP] [GO:0008635 "activation of cysteine-type
endopeptidase activity involved in apoptotic process by cytochrome
c" evidence=ISO] [GO:0010659 "cardiac muscle cell apoptotic
process" evidence=IMP] [GO:0010952 "positive regulation of
peptidase activity" evidence=ISO] [GO:0016505 "apoptotic protease
activator activity" evidence=ISO] [GO:0030154 "cell
differentiation" evidence=IEP] [GO:0030900 "forebrain development"
evidence=ISO] [GO:0031072 "heat shock protein binding"
evidence=IPI] [GO:0034349 "glial cell apoptotic process"
evidence=IEP] [GO:0042802 "identical protein binding"
evidence=ISO;IDA] [GO:0043293 "apoptosome" evidence=ISO;IDA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=IDA] [GO:0051402 "neuron apoptotic
process" evidence=ISO] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=IDA] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 RGD:620575 GO:GO:0005524 GO:GO:0007420 GO:GO:0030154
GO:GO:0006952 GO:GO:0006917 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0071560 GO:GO:0007568
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051260
GO:GO:0001666 GO:GO:0007584 GO:GO:0043531 GO:GO:0042802
Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0043293
CTD:317 HOVERGEN:HBG018730 KO:K02084 InterPro:IPR017251
PIRSF:PIRSF037646 EMBL:AF320222 IPI:IPI00324110 RefSeq:NP_076469.1
UniGene:Rn.64522 ProteinModelPortal:Q9EPV5 SMR:Q9EPV5
MINT:MINT-3370020 STRING:Q9EPV5 PRIDE:Q9EPV5 GeneID:78963
KEGG:rno:78963 UCSC:RGD:620575 InParanoid:Q9EPV5 NextBio:614396
Genevestigator:Q9EPV5 GermOnline:ENSRNOG00000008022 GO:GO:0010659
GO:GO:0034349 Uniprot:Q9EPV5
Length = 1249
Score = 126 (49.4 bits), Expect = 0.00021, P = 0.00021
Identities = 35/128 (27%), Positives = 64/128 (50%)
Query: 89 VSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSAS 148
VS C + ++ G G I++I++ N ++ S +GH ++ I+ +L+ S+S
Sbjct: 964 VSCCCLSPHLEYVAFGDEEGAIKIIELPNNRVFSSGIGHKKAVRHIQFTADGKTLI-SSS 1022
Query: 149 KDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFW 208
+D +++WN QT + + A H+ V DF R+ S D TVK+W++
Sbjct: 1023 EDSVIQVWNWQTEEYVFLQA----HQETVK--DFRLLRDSRLLSWSFDGTVKVWNV--IT 1074
Query: 209 TYVEKSFT 216
+E+ FT
Sbjct: 1075 GRIERDFT 1082
Score = 106 (42.4 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 27/108 (25%), Positives = 50/108 (46%)
Query: 100 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIR-TQPLKPSLVVSASKDESVRLWNV 158
++ ++ +++ D KL ++ H + +N T L+ + S D ++LW++
Sbjct: 671 YIATCSVDKKVKIWDSGTGKLVHTYEEHSEQVNCCHFTNKSNHLLLATGSNDSFLKLWDL 730
Query: 159 QTGICI-LIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
C +F GH N V F P D +ASC D T+K+W ++
Sbjct: 731 NQKECRNTMF----GHTNSVTHCRFSPDDEL-LASCSADGTLKLWDVR 773
Score = 89 (36.4 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 25/74 (33%), Positives = 37/74 (50%)
Query: 144 VVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWS 203
+ S D++++++ +TG +L H +EVL F D Y IA+C +D VKIW
Sbjct: 630 IASCGADKTLQVFKAETGEKLLDIKA---HEDEVLCCAFSSDDSY-IATCSVDKKVKIWD 685
Query: 204 M---KEFWTYVEKS 214
K TY E S
Sbjct: 686 SGTGKLVHTYEEHS 699
Score = 88 (36.0 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 33/128 (25%), Positives = 58/128 (45%)
Query: 80 EDKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDV-SNEKLHKSFVGHGDSINEIRTQP 138
ED E SW+ DG +VA N ++ ++D+ ++ L + GH +I P
Sbjct: 795 EDVEVIVKCCSWSA--DGDRIIVAAK-NKVL-LLDIHTSGLLTEIHTGHHSTIQYCDFSP 850
Query: 139 LKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNT 198
V++ S+ V LWN+ + + + A GH + V V F P D + D T
Sbjct: 851 YDHLAVIALSQ-YCVELWNIDSRVKV---ADCRGHLSWVHGVMFSP-DGSSFLTASDDQT 905
Query: 199 VKIWSMKE 206
+++W ++
Sbjct: 906 IRVWETRK 913
Score = 82 (33.9 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 21/65 (32%), Positives = 31/65 (47%)
Query: 302 HYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAI 361
H A G+ EG I + EL ++ V + + H K +R + DG T++S ED I
Sbjct: 972 HLEYVAFGDEEGAIKIIELPNNR-VFSSGIGH---KKAVRHIQFTADGKTLISSSEDSVI 1027
Query: 362 --WRW 364
W W
Sbjct: 1028 QVWNW 1032
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 117 (46.2 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 30/107 (28%), Positives = 57/107 (53%)
Query: 100 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 159
+L + + +I + + K+ GH I+++ S +VSAS D+++++W+++
Sbjct: 53 WLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWSS-DSSRLVSASDDKTLKVWDMR 111
Query: 160 TGICILIFAGAGGHRNEVLSVDFHP-SDIYRIASCGMDNTVKIWSMK 205
+G C+ G H + V DF+P S++ I S D +VKIW +K
Sbjct: 112 SGKCLKTLKG---HSDFVFCCDFNPPSNL--IVSGSFDESVKIWEVK 153
Score = 116 (45.9 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 33/103 (32%), Positives = 54/103 (52%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPS-LVVSASKDESVRLWNVQ 159
LV+ + ++V D+ + K K+ GH D + P PS L+VS S DESV++W V+
Sbjct: 96 LVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNP--PSNLIVSGSFDESVKIWEVK 153
Query: 160 TGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIW 202
TG C+ + H + + +V+F+ + I S D +IW
Sbjct: 154 TGKCLKTLSA---HSDPISAVNFNCNGSL-IVSGSYDGLCRIW 192
Score = 93 (37.8 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 26/89 (29%), Positives = 40/89 (44%)
Query: 117 NEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNE 176
N L + GH +I+ ++ P L SA+ D + +W G C G H E
Sbjct: 28 NYALRLTLAGHSAAISSVKFSPNGEWLASSAA-DALIIIWGAYDGNCKKTLYG---HSLE 83
Query: 177 VLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
+ V + SD R+ S D T+K+W M+
Sbjct: 84 ISDVAWS-SDSSRLVSASDDKTLKVWDMR 111
Score = 71 (30.1 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 23/72 (31%), Positives = 35/72 (48%)
Query: 297 FSCDFH--YNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILS 354
F CDF+ N G+ + + +WE+++ + LS A S PI + +GS I+S
Sbjct: 127 FCCDFNPPSNLIVSGSFDESVKIWEVKTGK--CLKTLS-AHS-DPISAVNFNCNGSLIVS 182
Query: 355 CCEDGAIWRWDA 366
DG WDA
Sbjct: 183 GSYDGLCRIWDA 194
Score = 67 (28.6 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 29/129 (22%), Positives = 51/129 (39%)
Query: 239 HSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIK 296
HS++V C + + I+S S D + +WE K T L+ I +
Sbjct: 122 HSDFVFCCDFNPPSNLIVSGSFDESVKIWEVK---------TGKCLKTLSAHSDPISAVN 172
Query: 297 FSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCC 356
F+C+ + G+ +G +W+ S + R + P+ S +G IL+
Sbjct: 173 FNCNG--SLIVSGSYDGLCRIWDAASGQCL---RTLADEGNPPVSFVKFSPNGKYILTAT 227
Query: 357 EDGAIWRWD 365
D + WD
Sbjct: 228 LDNTLKLWD 236
Score = 55 (24.4 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 27/104 (25%), Positives = 45/104 (43%)
Query: 250 GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPV-PECDI----WFIKFSCDFHYN 304
G +IL+ ++DN + LW+ + + T +KY + + W + S D N
Sbjct: 220 GKYILTATLDNTLKLWDYS-RGRCLKTYTGHKNEKYCLFASFSVTGRKWVVSGSED---N 275
Query: 305 AAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYD 348
I N + K V LQ V+I+ H +K+ I A+ D
Sbjct: 276 MVYIWNLQTKEIVQRLQGHTDVVISAACHP-TKNIIASAALEND 318
>UNIPROTKB|E1BY92 [details] [associations]
symbol:WSB1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 EMBL:AADN02025704 IPI:IPI00685000
Ensembl:ENSGALT00000034682 ArrayExpress:E1BY92 Uniprot:E1BY92
Length = 420
Score = 121 (47.7 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 32/109 (29%), Positives = 59/109 (54%)
Query: 101 LVAGGIN-GIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 159
L+A G+N G I++ DV KL + + H + + ++ P ++VSAS+D+++R+W+++
Sbjct: 142 LLATGLNNGRIKIWDVYTGKLLLNLMDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLK 201
Query: 160 T-GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEF 207
G + + G H+N V F P D + S G V +W M ++
Sbjct: 202 DDGNMMKVLRG---HQNWVYGCAFSP-DSSILCSVGASKAVFLWDMDKY 246
Score = 54 (24.1 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 32/140 (22%), Positives = 57/140 (40%)
Query: 239 HSNYVDCNRWL-GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPEC------- 290
H++ V C G + + S D + +W+P + G + +P P
Sbjct: 256 HNDVVACEFSPDGALLATASYDTRVYVWDPYI-----GVILREFGHLFPPPTPIFAGGAN 310
Query: 291 DIWF--IKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYD 348
D W + FS D + A+ ++ + W + PV +A L++ S D
Sbjct: 311 DRWVRSVSFSHDGLHIASLADDK--MVRFWRIDEEYPVQVAPLNNGLC------CTFSTD 362
Query: 349 GSTILSCCEDGAIWRWDAIP 368
GS +L+ +DG++ W A P
Sbjct: 363 GS-VLAAGQDGSVHFW-ATP 380
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 136 (52.9 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 32/104 (30%), Positives = 56/104 (53%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
+VAG +G IRV D+ K+ ++ +GH +I + P V S S+D +++LW+++
Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYG-EFVASGSQDTNIKLWDIRR 136
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
C+ + G H V + F P + +AS D+TVK+W +
Sbjct: 137 KGCVFRYRG---HSQAVRCLRFSPDGKW-LASAADDHTVKLWDL 176
Score = 135 (52.6 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 33/118 (27%), Positives = 62/118 (52%)
Query: 93 CNVDGIP---FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASK 149
C++D P F+ +G + I++ D+ + + GH ++ +R P + SA+
Sbjct: 109 CSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSP-DGKWLASAAD 167
Query: 150 DESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEF 207
D +V+LW++ G + F G H V V+FHP++ Y +AS D T++ W +++F
Sbjct: 168 DHTVKLWDLTAGKMMSEFPG---HTGPVNVVEFHPNE-YLLASGSSDRTIRFWDLEKF 221
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 136 (52.9 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 32/104 (30%), Positives = 56/104 (53%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
+VAG +G IRV D+ K+ ++ +GH +I + P V S S+D +++LW+++
Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYG-EFVASGSQDTNIKLWDIRR 136
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
C+ + G H V + F P + +AS D+TVK+W +
Sbjct: 137 KGCVFRYRG---HSQAVRCLRFSPDGKW-LASAADDHTVKLWDL 176
Score = 135 (52.6 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 33/118 (27%), Positives = 62/118 (52%)
Query: 93 CNVDGIP---FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASK 149
C++D P F+ +G + I++ D+ + + GH ++ +R P + SA+
Sbjct: 109 CSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSP-DGKWLASAAD 167
Query: 150 DESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEF 207
D +V+LW++ G + F G H V V+FHP++ Y +AS D T++ W +++F
Sbjct: 168 DHTVKLWDLTAGKMMSEFPG---HTGPVNVVEFHPNE-YLLASGSSDRTIRFWDLEKF 221
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 136 (52.9 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 32/104 (30%), Positives = 56/104 (53%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
+VAG +G IRV D+ K+ ++ +GH +I + P V S S+D +++LW+++
Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYG-EFVASGSQDTNIKLWDIRR 136
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
C+ + G H V + F P + +AS D+TVK+W +
Sbjct: 137 KGCVFRYRG---HSQAVRCLRFSPDGKW-LASAADDHTVKLWDL 176
Score = 135 (52.6 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 33/118 (27%), Positives = 62/118 (52%)
Query: 93 CNVDGIP---FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASK 149
C++D P F+ +G + I++ D+ + + GH ++ +R P + SA+
Sbjct: 109 CSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSP-DGKWLASAAD 167
Query: 150 DESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEF 207
D +V+LW++ G + F G H V V+FHP++ Y +AS D T++ W +++F
Sbjct: 168 DHTVKLWDLTAGKMMSEFPG---HTGPVNVVEFHPNE-YLLASGSSDRTIRFWDLEKF 221
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 136 (52.9 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 32/104 (30%), Positives = 56/104 (53%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
+VAG +G IRV D+ K+ ++ +GH +I + P V S S+D +++LW+++
Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYG-EFVASGSQDTNIKLWDIRR 136
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
C+ + G H V + F P + +AS D+TVK+W +
Sbjct: 137 KGCVFRYRG---HSQAVRCLRFSPDGKW-LASAADDHTVKLWDL 176
Score = 135 (52.6 bits), Expect = 9.8e-06, P = 9.8e-06
Identities = 33/118 (27%), Positives = 62/118 (52%)
Query: 93 CNVDGIP---FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASK 149
C++D P F+ +G + I++ D+ + + GH ++ +R P + SA+
Sbjct: 109 CSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSP-DGKWLASAAD 167
Query: 150 DESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEF 207
D +V+LW++ G + F G H V V+FHP++ Y +AS D T++ W +++F
Sbjct: 168 DHTVKLWDLTAGKMMSEFPG---HTGPVNVVEFHPNE-YLLASGSSDRTIRFWDLEKF 221
>ASPGD|ASPL0000032070 [details] [associations]
symbol:fbx23 species:162425 "Emericella nidulans"
[GO:0071482 "cellular response to light stimulus" evidence=IMP]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:BN001305 KO:K03362 EMBL:AACD01000096
OrthoDB:EOG4HQHSG RefSeq:XP_663197.1 ProteinModelPortal:Q5B1I7
EnsemblFungi:CADANIAT00003484 GeneID:2871879 KEGG:ani:AN5593.2
HOGENOM:HOG000191354 OMA:TNFQLPH Uniprot:Q5B1I7
Length = 854
Score = 142 (55.0 bits), Expect = 8.1e-06, Sum P(3) = 8.1e-06
Identities = 46/163 (28%), Positives = 83/163 (50%)
Query: 76 SYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKL-HKSFVGHGDSINEI 134
++++E +E Y + + G +LV+G + +RV D++ ++L H+ +GH S+ +
Sbjct: 320 AHMEEAHQECVYAIQFI----G-KWLVSGSRDKTVRVWDLNTKRLWHRPLIGHTKSVLCL 374
Query: 135 RTQPLKPS--LVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIAS 192
+ P PS +++S S D++V +W TG I A A H + VL++ F D + +
Sbjct: 375 QFNP-SPSEDIIISGSSDKNVIVWRFSTGEKIHEIAPA--HDDSVLNLRF---DHRYLVT 428
Query: 193 CGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFI 235
C D +KIW+ K + +K D PS V +P +I
Sbjct: 429 CSKDKLIKIWNRKNL-SPADK-----DYPSVHQGSGVSYPSYI 465
Score = 40 (19.1 bits), Expect = 8.1e-06, Sum P(3) = 8.1e-06
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 334 AQSKSPI-RQTAMSYDGSTILSCCEDGAIWRWDAI 367
AQ+ +P R + +D I+ +D I WD +
Sbjct: 804 AQAATPTSRIFKIQFDARKIICASQDPRIVGWDFV 838
Score = 38 (18.4 bits), Expect = 8.1e-06, Sum P(3) = 8.1e-06
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 239 HSNYVDCNRWLGDFILSKSVDNEIVLW 265
H+ V+ + GD I+S S D I +W
Sbjct: 500 HTAAVNAIQIHGDEIVSASGDRLIKIW 526
>POMBASE|SPBC428.19c [details] [associations]
symbol:utp15 "U3 snoRNP protein Utp15 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005819 "spindle" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0030490 "maturation of SSU-rRNA" evidence=ISO]
[GO:0030515 "snoRNA binding" evidence=ISO] [GO:0032040
"small-subunit processome" evidence=ISO] [GO:0034455 "t-UTP
complex" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR018983 Pfam:PF00400 Pfam:PF09384
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 PomBase:SPBC428.19c
GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 EMBL:CU329671 GO:GO:0030515
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GenomeReviews:CU329671_GR HSSP:P16649 GO:GO:0032040 GO:GO:0030490
GO:GO:0034455 HOGENOM:HOG000185028 KO:K14549 OMA:QFEGHTK PIR:T40471
RefSeq:NP_595197.1 ProteinModelPortal:O94365 STRING:O94365
EnsemblFungi:SPBC428.19c.1 GeneID:2540858 KEGG:spo:SPBC428.19c
OrthoDB:EOG4TB7KP NextBio:20801974 Uniprot:O94365
Length = 494
Score = 134 (52.2 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 41/178 (23%), Positives = 84/178 (47%)
Query: 33 KRPLYAVVFNFIDSRYFNV-----FATVGGNRVTVYQCLEGGVIAALQSYVDEDKEESFY 87
K P+ A ++ I S +F+ FA G RV +Y G +++ + K+ ++
Sbjct: 31 KVPVVAKEYSAITSIHFSAESPYDFAVTSGARVQIY----GASSRSVKKTIARFKDTAY- 85
Query: 88 TVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSA 147
S DG L+AG G++++ D+S + ++ H ++ + P + +S
Sbjct: 86 --SGNIRKDG-KLLLAGDATGLVQIFDLSTRSILRALDAHQFPVHVTQFCPYANTTFLSG 142
Query: 148 SKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
S D++V++W++ TG + GH + V + + + R+ S G D T+++W +
Sbjct: 143 SDDKTVKVWDLSTGA---VQYDLSGHEDYVRTASWMSAT--RLVSGGYDGTIRLWDTR 195
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 126 (49.4 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 37/143 (25%), Positives = 66/143 (46%)
Query: 62 VYQCLEGGVIAALQSYVDEDKEESF-YTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKL 120
++ + G +A L + DE + F YT G + +G R+ + +
Sbjct: 287 LWDAVNGKCVATLTGHDDEILDSCFDYT--------G-KLIATASADGTARIFSAATREC 337
Query: 121 HKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSV 180
GH I++I P + + +++ S D++ R+W+ QTG C+ + G H +E+ S
Sbjct: 338 VTKLEGHEGEISKISFNP-QGNRLLTGSSDKTARIWDAQTGQCLQVLEG---HTDEIFSC 393
Query: 181 DF-HPSDIYRIASCGMDNTVKIW 202
F + DI I + DNT +IW
Sbjct: 394 AFNYKGDI--IITGSKDNTCRIW 414
Score = 124 (48.7 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
Identities = 33/115 (28%), Positives = 57/115 (49%)
Query: 92 ACNVDGIPFLVAGGINGIIRVIDV-SNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKD 150
A N G F + G + ++ D S E+LH + GH + + I + + S D
Sbjct: 99 ALNKSGSCF-ITGSYDRTCKLWDTASGEELH-TLEGHRNVVYAIAFNNPYGDKIATGSFD 156
Query: 151 ESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
++ +LW+V+TG C F G H E++ + F+P +A+ MD T K+W ++
Sbjct: 157 KTCKLWSVETGKCYHTFRG---HTAEIVCLSFNPQSTL-VATGSMDTTAKLWDIQ 207
Score = 116 (45.9 bits), Expect = 0.00061, P = 0.00061
Identities = 62/282 (21%), Positives = 111/282 (39%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
+ G + ++ V K + +F GH I + P + +LV + S D + +LW++Q+
Sbjct: 150 IATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNP-QSTLVATGSMDTTAKLWDIQS 208
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDL 220
G + G H E++S+ F+ S RI + D+TV +W K +T
Sbjct: 209 GEEVFTLTG---HSAEIISLSFNTSG-NRIITGSFDHTVTVWEADTG----RKVYTLIGH 260
Query: 221 PSKFPTKYVQFPVFIASVHSNYVDCNRWLGDFILSKSV------DNEIVL----WEPKMK 270
++ + + + S C W D + K V D+EI+ + K+
Sbjct: 261 CAEISSAVFNWDCSLILTGSMDKTCKLW--DAVNGKCVATLTGHDDEILDSCFDYTGKLI 318
Query: 271 EQSPGEGTADILQKYPVPEC-------DIWFIKFSCDFHYNAAAIGNREGKIFVWELQSS 323
+ +GTA I EC + K S + N G+ + +W+ Q+
Sbjct: 319 ATASADGTARIFSA-ATRECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQTG 377
Query: 324 PPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGA--IWR 363
+ + H I A +Y G I++ +D IWR
Sbjct: 378 QCLQVLE-GHTDE---IFSCAFNYKGDIIITGSKDNTCRIWR 415
Score = 50 (22.7 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
Identities = 18/73 (24%), Positives = 29/73 (39%)
Query: 295 IKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILS 354
I S + N G+ + + VWE + V + H + I ++D S IL+
Sbjct: 223 ISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTL-IGHC---AEISSAVFNWDCSLILT 278
Query: 355 CCEDGAIWRWDAI 367
D WDA+
Sbjct: 279 GSMDKTCKLWDAV 291
>SGD|S000003105 [details] [associations]
symbol:SEC27 "Essential beta'-coat protein of the COPI
coatomer" species:4932 "Saccharomyces cerevisiae" [GO:0000139
"Golgi membrane" evidence=IEA] [GO:0032511 "late endosome to
vacuole transport via multivesicular body sorting pathway"
evidence=IMP;IPI] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0030126 "COPI vesicle coat" evidence=IGI;ISS] [GO:0006888 "ER
to Golgi vesicle-mediated transport" evidence=IMP] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=IMP]
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0030117 "membrane coat" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000003105 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:BK006941
GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006888 GO:GO:0030126 GO:GO:0006890 GO:GO:0043130
HOGENOM:HOG000163444 InterPro:IPR016453 PIRSF:PIRSF005567
GeneTree:ENSGT00640000091529 OMA:LRNKAFG OrthoDB:EOG48H0BF
GO:GO:0032511 EMBL:U11237 EMBL:X92670 EMBL:Z72659 PIR:B55123
RefSeq:NP_011378.1 PDB:2YNN PDB:2YNO PDB:2YNP PDBsum:2YNN
PDBsum:2YNO PDBsum:2YNP ProteinModelPortal:P41811 SMR:P41811
DIP:DIP-6468N IntAct:P41811 MINT:MINT-428887 STRING:P41811
PaxDb:P41811 PeptideAtlas:P41811 EnsemblFungi:YGL137W GeneID:852740
KEGG:sce:YGL137W CYGD:YGL137w NextBio:972153 Genevestigator:P41811
GermOnline:YGL137W Uniprot:P41811
Length = 889
Score = 137 (53.3 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 36/106 (33%), Positives = 54/106 (50%)
Query: 100 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 159
+++ G + IRV + + + F H D I I P KP V+S S D +V+LWN +
Sbjct: 69 WIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKP-YVLSGSDDLTVKLWNWE 127
Query: 160 TGICI-LIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
+ F G H + V+ V F+P D AS +D TVK+WS+
Sbjct: 128 NNWALEQTFEG---HEHFVMCVAFNPKDPSTFASGCLDRTVKVWSL 170
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 123 (48.4 bits), Expect = 8.7e-06, Sum P(2) = 8.7e-06
Identities = 33/115 (28%), Positives = 56/115 (48%)
Query: 92 ACNVDGIPFLVAGGINGIIRVIDV-SNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKD 150
A N G F + G + ++ D S E+LH + GH + + I V + S D
Sbjct: 99 AFNKSGSCF-ITGSYDRTCKIWDTASGEELH-TLEGHRNVVYAIAFNNPYGDKVATGSFD 156
Query: 151 ESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
++ +LW+ +TG C F G H E++ + F+P +A+ MD T K+W ++
Sbjct: 157 KTCKLWSAETGKCFYTFRG---HTAEIVCLAFNPQSTL-VATGSMDTTAKLWDVE 207
Score = 51 (23.0 bits), Expect = 8.7e-06, Sum P(2) = 8.7e-06
Identities = 25/115 (21%), Positives = 44/115 (38%)
Query: 245 CNRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYN 304
C GD +++ S D+ +LW+ P +L + +I ++F+ D
Sbjct: 226 CFNTTGDRLVTGSFDHTAILWDV------PSGRKVHVLSGH---RGEISCVQFNWDCSLI 276
Query: 305 AAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDG 359
A A ++ K VW+ + L L H + +Y G I + DG
Sbjct: 277 ATASLDKSCK--VWDAEGGQ-CLATLLGH---NDEVLDVCFNYTGQLIATASADG 325
Score = 39 (18.8 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 344 AMSYDGSTILSCCEDGA--IW 362
A +Y+G TI++ +D IW
Sbjct: 394 AFNYEGDTIITGSKDNTCRIW 414
Score = 39 (18.8 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 239 HSNYV-DCN-RWLGDFILSKSVDNEIVLW 265
HS+ + C + GD I++ S DN +W
Sbjct: 386 HSDEIFSCAFNYEGDTIITGSKDNTCRIW 414
>UNIPROTKB|F1P5E8 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AADN02035964
EMBL:AADN02035965 EMBL:AADN02035966 IPI:IPI00735168
Ensembl:ENSGALT00000003489 ArrayExpress:F1P5E8 Uniprot:F1P5E8
Length = 515
Score = 130 (50.8 bits), Expect = 8.9e-06, Sum P(2) = 8.9e-06
Identities = 31/103 (30%), Positives = 56/103 (54%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
+V G + +RV DV+ ++ + + H +++ +R L+V+ SKD S+ +W++ +
Sbjct: 266 IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLR---FSNGLMVTCSKDRSIAVWDMAS 322
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWS 203
I + GHR V VDF D Y +++ G D T+K+WS
Sbjct: 323 PTDITLRRVLVGHRAAVNVVDF--DDKYIVSASG-DRTIKVWS 362
Score = 46 (21.3 bits), Expect = 8.9e-06, Sum P(2) = 8.9e-06
Identities = 16/87 (18%), Positives = 37/87 (42%)
Query: 239 HSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFS 298
H V C R+ I+S + D +I +W+ + + L+ ++ ++F
Sbjct: 415 HEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFD 474
Query: 299 CDFHYNAAAIGNREGKIFVWELQSSPP 325
+F +++ + I +W+ + PP
Sbjct: 475 -EFQIISSS---HDDTILIWDFLNVPP 497
Score = 44 (20.5 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 14/57 (24%), Positives = 25/57 (43%)
Query: 309 GNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWD 365
G+ + I +W+++ + + H + IR +D I+S DG I WD
Sbjct: 392 GSSDNTIRLWDIECGACLRVLE-GHEELVRCIR-----FDNKRIVSGAYDGKIKVWD 442
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 136 (52.9 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 32/104 (30%), Positives = 56/104 (53%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
+VAG +G IRV D+ K+ ++ +GH +I + P V S S+D +++LW+++
Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYG-EFVASGSQDTNIKLWDIRR 136
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
C+ + G H V + F P + +AS D+TVK+W +
Sbjct: 137 KGCVFRYRG---HSQAVRCLRFSPDGKW-LASAADDHTVKLWDL 176
Score = 135 (52.6 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 33/118 (27%), Positives = 62/118 (52%)
Query: 93 CNVDGIP---FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASK 149
C++D P F+ +G + I++ D+ + + GH ++ +R P + SA+
Sbjct: 109 CSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSP-DGKWLASAAD 167
Query: 150 DESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEF 207
D +V+LW++ G + F G H V V+FHP++ Y +AS D T++ W +++F
Sbjct: 168 DHTVKLWDLTAGKMMSEFPG---HTGPVNVVEFHPNE-YLLASGSSDRTIRFWDLEKF 221
Score = 37 (18.1 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 7/26 (26%), Positives = 13/26 (50%)
Query: 195 MDNTVKIWSMKEFWTYVEKSFTWTDL 220
+D +W+M + T V+ + DL
Sbjct: 509 LDTVRAVWTMGDIKTSVDSAVAINDL 534
>UNIPROTKB|E3W9A3 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0000922
"spindle pole" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IEA]
[GO:0008568 "microtubule-severing ATPase activity" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0031117 "positive regulation
of microtubule depolymerization" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005886 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0008352
PANTHER:PTHR19845 IPI:IPI00822740 OMA:NAISRTP GO:GO:0031117
EMBL:AADN02065753 EMBL:AADN02065752 ProteinModelPortal:E3W9A3
Ensembl:ENSGALT00000040450 ArrayExpress:E3W9A3 Uniprot:E3W9A3
Length = 661
Score = 132 (51.5 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 34/104 (32%), Positives = 54/104 (51%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
+VAG +G IRV D+ K+ ++ +GH +I + P S V S S D ++LW+V+
Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYG-SFVASGSLDTDIKLWDVRR 136
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
CI + H V + F P + +AS D+TVK+W +
Sbjct: 137 KGCIFKYKS---HTQAVRCLRFSPDGKW-LASAADDHTVKLWDL 176
Score = 131 (51.2 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 32/118 (27%), Positives = 61/118 (51%)
Query: 93 CNVDGIP---FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASK 149
C++D P F+ +G ++ I++ DV + + H ++ +R P + SA+
Sbjct: 109 CSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSP-DGKWLASAAD 167
Query: 150 DESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEF 207
D +V+LW++ G + F G H V V+FHPS+ Y +A + T++ W +++F
Sbjct: 168 DHTVKLWDLTAGKVMFEFTG---HYGPVNVVEFHPSE-YPLAGSPVHRTIRFWDLEKF 221
Score = 125 (49.1 bits), Expect = 9.7e-06, Sum P(2) = 9.7e-06
Identities = 28/105 (26%), Positives = 52/105 (49%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
L GG + + V V+ S GH I ++ K L+V+ S+ S+R+W+++
Sbjct: 36 LATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISA-KEELIVAGSQSGSIRVWDLEA 94
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
+ G H+ + S+DFHP + +AS +D +K+W ++
Sbjct: 95 AKILRTLLG---HKANICSLDFHPYGSF-VASGSLDTDIKLWDVR 135
Score = 54 (24.1 bits), Expect = 9.7e-06, Sum P(2) = 9.7e-06
Identities = 29/126 (23%), Positives = 54/126 (42%)
Query: 250 GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIG 309
G F+ S S+D +I LW+ + K + KY + ++FS D + A+A
Sbjct: 117 GSFVASGSLDTDIKLWDVRRK---------GCIFKYKSHTQAVRCLRFSPDGKWLASAAD 167
Query: 310 NREGKIFVWELQSSP----------PVLIARLSHAQ---SKSPIRQTAMSYDGST--ILS 354
+ K+ W+L + PV + ++ + SP+ +T +D ++S
Sbjct: 168 DHTVKL--WDLTAGKVMFEFTGHYGPVNVVEFHPSEYPLAGSPVHRTIRFWDLEKFHVVS 225
Query: 355 CCEDGA 360
C E+ A
Sbjct: 226 CIEEEA 231
>MGI|MGI:1306796 [details] [associations]
symbol:Apaf1 "apoptotic peptidase activating factor 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA;TAS]
[GO:0006309 "apoptotic DNA fragmentation" evidence=IGI] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006917 "induction of
apoptosis" evidence=ISO] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process"
evidence=ISO;IGI;IMP] [GO:0006952 "defense response" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IMP]
[GO:0007420 "brain development" evidence=IMP] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=ISO] [GO:0010659
"cardiac muscle cell apoptotic process" evidence=ISO] [GO:0010952
"positive regulation of peptidase activity" evidence=IPI]
[GO:0016505 "apoptotic protease activator activity" evidence=IPI]
[GO:0030900 "forebrain development" evidence=IMP] [GO:0031072 "heat
shock protein binding" evidence=ISO] [GO:0042802 "identical protein
binding" evidence=ISO;IPI] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0043293 "apoptosome" evidence=ISO]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0051402 "neuron apoptotic
process" evidence=IGI] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR000767 InterPro:IPR001315
InterPro:IPR001680 InterPro:IPR002182 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00619 Pfam:PF00931 PRINTS:PR00364
PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294 SMART:SM00320
EMBL:AF064071 MGI:MGI:1306796 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005794 GO:GO:0006952 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900 GO:GO:0051402
GO:GO:0043531 GO:GO:0006919 GO:GO:0001843 GO:GO:0006309
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OrthoDB:EOG43TZTP GO:GO:0043293 GO:GO:0016505 CTD:317
HOVERGEN:HBG018730 KO:K02084 OMA:KVCKNSA InterPro:IPR017251
PIRSF:PIRSF037646 EMBL:BC131683 EMBL:BC131684 IPI:IPI00135366
IPI:IPI00654978 RefSeq:NP_001036023.1 RefSeq:NP_033814.2
UniGene:Mm.220289 PDB:3SFZ PDB:3SHF PDBsum:3SFZ PDBsum:3SHF
ProteinModelPortal:O88879 SMR:O88879 IntAct:O88879 STRING:O88879
PhosphoSite:O88879 PaxDb:O88879 PRIDE:O88879
Ensembl:ENSMUST00000020157 Ensembl:ENSMUST00000159110 GeneID:11783
KEGG:mmu:11783 GeneTree:ENSGT00700000104017 InParanoid:A2RRK8
ChiTaRS:APAF1 NextBio:279591 Bgee:O88879 CleanEx:MM_APAF1
Genevestigator:O88879 GermOnline:ENSMUSG00000019979 Uniprot:O88879
Length = 1249
Score = 138 (53.6 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 37/128 (28%), Positives = 66/128 (51%)
Query: 89 VSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSAS 148
VS C + ++ G +G I++I++ N ++ S VGH ++ I+ +L+ S+S
Sbjct: 964 VSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLI-SSS 1022
Query: 149 KDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFW 208
+D +++WN QTG + + A H+ V DF R+ S D TVK+W++
Sbjct: 1023 EDSVIQVWNWQTGDYVFLQA----HQETVK--DFRLLQDSRLLSWSFDGTVKVWNV--IT 1074
Query: 209 TYVEKSFT 216
+E+ FT
Sbjct: 1075 GRIERDFT 1082
Score = 97 (39.2 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 26/98 (26%), Positives = 47/98 (47%)
Query: 110 IRVIDVSNEKLHKSFVGHGDSINEIR-TQPLKPSLVVSASKDESVRLWNVQTGICI-LIF 167
+++ D + KL ++ H + +N T L+ + S D ++LW++ C +F
Sbjct: 681 VKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMF 740
Query: 168 AGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
GH N V F P D +ASC D T+++W ++
Sbjct: 741 ----GHTNSVNHCRFSPDDEL-LASCSADGTLRLWDVR 773
Score = 78 (32.5 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 20/65 (30%), Positives = 31/65 (47%)
Query: 302 HYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAI 361
H A G+ +G I + EL ++ V + + H K +R + DG T++S ED I
Sbjct: 972 HLEYVAFGDEDGAIKIIELPNNR-VFSSGVGH---KKAVRHIQFTADGKTLISSSEDSVI 1027
Query: 362 --WRW 364
W W
Sbjct: 1028 QVWNW 1032
>SGD|S000001308 [details] [associations]
symbol:MET30 "F-box protein containing five copies of the
WD40 motif" species:4932 "Saccharomyces cerevisiae" [GO:0008652
"cellular amino acid biosynthetic process" evidence=IEA]
[GO:0019344 "cysteine biosynthetic process" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IGI;IPI] [GO:0000209 "protein polyubiquitination"
evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0009086
"methionine biosynthetic process" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0043224 "nuclear SCF ubiquitin ligase
complex" evidence=IDA] [GO:0046685 "response to arsenic-containing
substance" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IDA] [GO:0000114 "regulation of transcription involved in
G1 phase of mitotic cell cycle" evidence=IMP] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IMP] [GO:0000087 "M phase of mitotic cell cycle"
evidence=IMP] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IMP] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 UniPathway:UPA00143 SGD:S000001308 GO:GO:0005737
GO:GO:0046686 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046685 GO:GO:0000082 EMBL:BK006942
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
SUPFAM:SSF81383 EMBL:Z46861 GO:GO:0000114 GO:GO:0009086
GO:GO:0000209 GO:GO:0019344 GO:GO:0043130 GO:GO:0031146
GO:GO:0000087 GO:GO:0043224 GO:GO:0030174
GeneTree:ENSGT00690000101849 EMBL:L26505 PIR:S49932
RefSeq:NP_012218.1 ProteinModelPortal:P39014 SMR:P39014
DIP:DIP-1439N IntAct:P39014 MINT:MINT-385167 STRING:P39014
PaxDb:P39014 PeptideAtlas:P39014 EnsemblFungi:YIL046W GeneID:854765
KEGG:sce:YIL046W CYGD:YIL046w HOGENOM:HOG000166480 KO:K10259
OMA:ILCYLDT OrthoDB:EOG496313 NextBio:977517 Genevestigator:P39014
GermOnline:YIL046W Uniprot:P39014
Length = 640
Score = 140 (54.3 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 38/132 (28%), Positives = 60/132 (45%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
L G + I + D+ KL + GH D + + K +++ S D+++R+WN T
Sbjct: 315 LFTGSYDSTIGIWDLFTGKLIRRLSGHSDGVKTLYFDDRK---LITGSLDKTIRVWNYIT 371
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFT-WTD 219
G CI + G H + VLSVD + I S D TVK+W ++ Y + T W +
Sbjct: 372 GECISTYRG---HSDSVLSVDSYQKVI---VSGSADKTVKVWHVESRTCYTLRGHTEWVN 425
Query: 220 LPSKFPTKYVQF 231
P + F
Sbjct: 426 CVKLHPKSFSCF 437
Score = 37 (18.1 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 348 DGSTILSCCEDGAIWRWD 365
D I+S DG+I WD
Sbjct: 561 DNFRIISGSHDGSIKVWD 578
>SGD|S000000680 [details] [associations]
symbol:TUP1 "General repressor of transcription" species:4932
"Saccharomyces cerevisiae" [GO:0001191 "RNA polymerase II
transcription factor binding transcription factor activity involved
in negative regulation of transcription" evidence=IMP;IDA;IPI]
[GO:0017053 "transcriptional repressor complex" evidence=IDA]
[GO:0001198 "negative regulation of mating-type specific
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0000433 "negative regulation of transcription from RNA
polymerase II promoter by glucose" evidence=IMP] [GO:2000531
"regulation of fatty acid biosynthetic process by regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0036033 "mediator
complex binding" evidence=IDA;IPI] [GO:0042826 "histone deacetylase
binding" evidence=IDA;IPI] [GO:0043486 "histone exchange"
evidence=IMP] [GO:0061418 "regulation of transcription from RNA
polymerase II promoter in response to hypoxia" evidence=IMP]
[GO:0061392 "regulation of transcription from RNA polymerase II
promoter in response to osmotic stress" evidence=IMP] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IMP] [GO:0042393 "histone
binding" evidence=IDA;IPI] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA;IPI] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0035955 "negative regulation of dipeptide transport by negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IMP] [GO:0016584 "nucleosome positioning"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000000680 GO:GO:0017053 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GO:GO:2001020 GO:GO:0043486 GO:GO:0042393 GO:GO:0042826
GO:GO:0061418 GO:GO:0016584 GO:GO:0043130 GO:GO:0080025
GO:GO:0001191 GO:GO:0035955 GO:GO:0000433 GO:GO:0007070
GO:GO:2000531 GO:GO:0061392 GeneTree:ENSGT00700000104507
GO:GO:0001198 GO:GO:0036033 HOGENOM:HOG000200558 KO:K06666
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:M31733 EMBL:M35861 EMBL:X16365 PIR:JN0133 RefSeq:NP_010007.1
PDB:1ERJ PDB:3VP8 PDB:3VP9 PDBsum:1ERJ PDBsum:3VP8 PDBsum:3VP9
ProteinModelPortal:P16649 SMR:P16649 DIP:DIP-512N IntAct:P16649
MINT:MINT-648551 STRING:P16649 PaxDb:P16649 PeptideAtlas:P16649
EnsemblFungi:YCR084C GeneID:850445 KEGG:sce:YCR084C CYGD:YCR084c
OMA:TISESCI EvolutionaryTrace:P16649 NextBio:966057
Genevestigator:P16649 GermOnline:YCR084C Uniprot:P16649
Length = 713
Score = 135 (52.6 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 38/116 (32%), Positives = 56/116 (48%)
Query: 87 YTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVS 146
Y S + DG FL G + +IR+ D+ N K+ GH I + P LV S
Sbjct: 445 YIRSVCFSPDG-KFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLV-S 502
Query: 147 ASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIW 202
S D +VR+W+++TG C L + G V +V P D IA+ +D V++W
Sbjct: 503 GSGDRTVRIWDLRTGQCSLTLSIEDG----VTTVAVSPGDGKYIAAGSLDRAVRVW 554
Score = 125 (49.1 bits), Expect = 0.00014, P = 0.00014
Identities = 45/190 (23%), Positives = 86/190 (45%)
Query: 83 EESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPS 142
E+ Y++ + + D LV+G + +R+ D+ + + + D + + P
Sbjct: 485 EQDIYSLDYFPSGDK---LVSGSGDRTVRIWDLRTGQCSLT-LSIEDGVTTVAVSPGDGK 540
Query: 143 LVVSASKDESVRLWNVQTGICILIFAG---AG-GHRNEVLSVDFHPSDIYRIASCGMDNT 198
+ + S D +VR+W+ +TG + +G GH++ V SV F D + S +D +
Sbjct: 541 YIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVF-TRDGQSVVSGSLDRS 599
Query: 199 VKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWLGDFILSKSV 258
VK+W+++ KS + T Y+ F+ SV + D ++ILS S
Sbjct: 600 VKLWNLQNA---NNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQND------EYILSGSK 650
Query: 259 DNEIVLWEPK 268
D ++ W+ K
Sbjct: 651 DRGVLFWDKK 660
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 119 (46.9 bits), Expect = 0.00021, P = 0.00021
Identities = 34/107 (31%), Positives = 54/107 (50%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
+++GGI+ I+V D+ KL S GHGDS+ + S ++S S D SVR+W+++
Sbjct: 198 IISGGIDNDIKVWDLRQNKLIYSMQGHGDSVTGLSLSA-DGSYLLSNSMDNSVRVWDIRP 256
Query: 161 GI----CILIFAG-AGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIW 202
C+ IF G +L + +D +IA+ D V IW
Sbjct: 257 FAPKERCVKIFQGNVHNFEKNLLRCSWS-ADGSKIAAGSADRFVYIW 302
Score = 108 (43.1 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 32/114 (28%), Positives = 53/114 (46%)
Query: 94 NVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESV 153
N DG L + + + V D + K GH +N P L + S D +V
Sbjct: 108 NTDG-SLLFSASTDKTVCVWDSETGERVKRLKGHTSFVNSCFPARRGPQLACTGSDDGTV 166
Query: 154 RLWNVQTGICILIFAGAGGHRNEVLSVDFHP-SDIYRIASCGMDNTVKIWSMKE 206
+LW+++ + F +VLSV F+ SD +I S G+DN +K+W +++
Sbjct: 167 KLWDIRKKASVHTFQNT----YQVLSVTFNDTSD--QIISGGIDNDIKVWDLRQ 214
Score = 64 (27.6 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 24/114 (21%), Positives = 53/114 (46%)
Query: 250 GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIG 309
G ++LS S+DN + +W+ ++ +P E I Q V + ++ S + A G
Sbjct: 237 GSYLLSNSMDNSVRVWD--IRPFAPKERCVKIFQGN-VHNFEKNLLRCSWSADGSKIAAG 293
Query: 310 NREGKIFVWELQSSPPVLIARL-SHAQSKSPIRQTAMSYDGSTILSCCEDGAIW 362
+ + +++W+ + ++ +L HA S + + A + +LS D ++
Sbjct: 294 SADRFVYIWDTTTRR--IVYKLPGHAGS---VNEVAFHPEEPIVLSGSSDKRLY 342
Score = 55 (24.4 bits), Expect = 9.1e-05, Sum P(2) = 9.1e-05
Identities = 28/121 (23%), Positives = 53/121 (43%)
Query: 251 DFILSKSVDNEIVLWEPKMKEQSPG-EGTADILQKYPVPECDIWFIKFSCDFHYNAAAIG 309
D I+S +DN+I +W+ + + +G D + + S D Y +
Sbjct: 196 DQIISGGIDNDIKVWDLRQNKLIYSMQGHGD----------SVTGLSLSADGSYLLS--N 243
Query: 310 NREGKIFVWELQSSPP----VLIARLS-HAQSKSPIRQTAMSYDGSTILSCCEDGAIWRW 364
+ + + VW+++ P V I + + H K+ +R + S DGS I + D ++ W
Sbjct: 244 SMDNSVRVWDIRPFAPKERCVKIFQGNVHNFEKNLLR-CSWSADGSKIAAGSADRFVYIW 302
Query: 365 D 365
D
Sbjct: 303 D 303
>DICTYBASE|DDB_G0269728 [details] [associations]
symbol:ciao1 "putative cytosolic iron-sulfur assembly
protein" species:44689 "Dictyostelium discoideum" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0269728 EMBL:AAFI02000005
GenomeReviews:CM000150_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
HSSP:P63005 RefSeq:XP_646229.1 ProteinModelPortal:Q55DA2
STRING:Q55DA2 EnsemblProtists:DDB0266672 GeneID:8617183
KEGG:ddi:DDB_G0269728 ProtClustDB:CLSZ2497289 Uniprot:Q55DA2
Length = 333
Score = 102 (41.0 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 41/193 (21%), Positives = 85/193 (44%)
Query: 16 TPSKKREYRVTNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIAAL 74
T + K ++ + +Q+ + P Y V+N + AT ++ + ++ G +
Sbjct: 5 TKNDKYNLKLIDSMQK-EAP-YDKVWNLAWHPNGEILATCANDKYIQIWSKDTNGKWGLV 62
Query: 75 QSYVDEDKEESFYTVSWA-CNVDGIPFLVAGGINGIIRVIDVSNEKL---H-KSFVGHGD 129
QS E E++ V+W+ C FL + + + S ++L H S GH
Sbjct: 63 QSL--EGHEKTVRRVAWSPCG----RFLAGASFDASTSIWEKSKDELEFTHVSSLEGHTY 116
Query: 130 SINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYR 189
+ + +L+ + S+D+S+ +W ++ + GH ++ V +HP++
Sbjct: 117 EVKSVAWDSTG-TLLATCSRDKSIWIWQMEDDNDFECLSINSGHGQDIKCVLWHPNEEL- 174
Query: 190 IASCGMDNTVKIW 202
+AS D+T+K W
Sbjct: 175 LASSSYDDTIKFW 187
Score = 70 (29.7 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 28/115 (24%), Positives = 59/115 (51%)
Query: 207 FWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWLGDFILSKSVDNEIVLWE 266
FW + +++ W ++ KF + + P++ +D + L + I++ S D+ I+ +E
Sbjct: 230 FWKFDKENEKWINI-FKFKNENSR-PIYS-------IDWSS-LTNTIVTGSADDSIIFYE 279
Query: 267 PKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQ 321
+ + +P + IL+K + D+ K++ F A+ G+ +G I +WELQ
Sbjct: 280 QE-SDDTPDKYKI-ILKKKNAHDSDVNCTKWNPKFKNILASCGD-DGFIKIWELQ 331
Score = 51 (23.0 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 337 KSPIRQTAMSYDGSTILSCCEDGAI--WRWD 365
+S I A + DG ++SC ED + W++D
Sbjct: 204 ESSIWDLAFNKDGDKLVSCGEDKLVLFWKFD 234
>RGD|1359599 [details] [associations]
symbol:Wsb2 "WD repeat and SOCS box-containing 2" species:10116
"Rattus norvegicus" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 RGD:1359599
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 HOGENOM:HOG000063727
HOVERGEN:HBG034543 CTD:55884 KO:K10342 OrthoDB:EOG45DWPC
EMBL:BC081901 IPI:IPI00371120 RefSeq:NP_001007617.1 UniGene:Rn.4063
Ensembl:ENSRNOT00000001499 GeneID:288692 KEGG:rno:288692
UCSC:RGD:1359599 InParanoid:Q66HE3 NextBio:628569
Genevestigator:Q66HE3 Uniprot:Q66HE3
Length = 404
Score = 116 (45.9 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 32/115 (27%), Positives = 60/115 (52%)
Query: 101 LVAGGIN-GIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 159
++A G+N G I++ +V L + GH D + ++ P ++VSAS+D+++R+W++
Sbjct: 125 ILATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPNGSLILVSASRDKTLRIWDLN 184
Query: 160 T-GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEK 213
G I + +G H V P D + S + +V +WSM+ + T + K
Sbjct: 185 KHGKQIQVLSG---HLQWVYCCSISP-DCSMLCSAAGEKSVFLWSMRSY-TLIRK 234
Score = 57 (25.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 29/134 (21%), Positives = 57/134 (42%)
Query: 240 SNYVDCNRWLGD--FILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWF--- 294
S+ V C+ + D +++ S D +++W+P E+ + + PV + D+
Sbjct: 240 SSVVSCD-FSPDSALLVTASYDTSVIMWDPYTGERLRSLHHTQL--EAPVDDSDVHMSSL 296
Query: 295 --IKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTI 352
+ FS + Y A +R + +W L+ PV A +++ + T + G I
Sbjct: 297 RSVCFSPEGLYLATVADDR--LLRIWALELKAPVAFAPMTNG-----LCCTFFPH-GGVI 348
Query: 353 LSCCEDGAIWRWDA 366
+ DG + W A
Sbjct: 349 ATGTRDGHVQFWTA 362
>DICTYBASE|DDB_G0287337 [details] [associations]
symbol:taf5 "TFIID subunit" species:44689
"Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005669 "transcription factor TFIID complex"
evidence=ISS] [GO:0000124 "SAGA complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0287337 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016568 GenomeReviews:CM000154_GR GO:GO:0006366
EMBL:AAFI02000100 GO:GO:0000124 GO:GO:0003743 GO:GO:0005669
KO:K03130 OMA:PNINYLA RefSeq:XP_637246.1 ProteinModelPortal:Q54KH7
STRING:Q54KH7 EnsemblProtists:DDB0231003 GeneID:8626077
KEGG:ddi:DDB_G0287337 InParanoid:Q54KH7 ProtClustDB:CLSZ2497147
Uniprot:Q54KH7
Length = 948
Score = 136 (52.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 30/81 (37%), Positives = 44/81 (54%)
Query: 124 FVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFH 183
F GH N +R P + + + S D+S RLW +QTG C+ IF G HR + +V F
Sbjct: 759 FTGHLSDCNTVRFHP-NINYLATGSNDKSARLWEIQTGKCVRIFMG---HRAPIYTVAFS 814
Query: 184 PSDIYRIASCGMDNTVKIWSM 204
P D +A+ G D +V +W +
Sbjct: 815 P-DGRLLATAGEDTSVILWDL 834
Score = 98 (39.6 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 24/86 (27%), Positives = 41/86 (47%)
Query: 118 EKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEV 177
E K+F+GH + P ++S S+D + RLW+++T ++ + G H V
Sbjct: 669 ESEFKTFLGHSGPVYGCSFSP-DSQYLLSCSEDTTARLWSMETMSNLVCYKG---HNFPV 724
Query: 178 LSVDFHPSDIYRIASCGMDNTVKIWS 203
V F P Y A+ D T ++W+
Sbjct: 725 WDVSFSPFGFY-FATASHDRTARLWT 749
Score = 74 (31.1 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 21/67 (31%), Positives = 33/67 (49%)
Query: 301 FH--YNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCED 358
FH N A G+ + +WE+Q+ V I + H ++PI A S DG + + ED
Sbjct: 771 FHPNINYLATGSNDKSARLWEIQTGKCVRIF-MGH---RAPIYTVAFSPDGRLLATAGED 826
Query: 359 GAIWRWD 365
++ WD
Sbjct: 827 TSVILWD 833
>ASPGD|ASPL0000077901 [details] [associations]
symbol:AN4648 species:162425 "Emericella nidulans"
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005819
"spindle" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR018983 Pfam:PF00400 Pfam:PF09384
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003676 GO:GO:0030529 EMBL:BN001303 EMBL:AACD01000079
GO:GO:0006364 HOGENOM:HOG000185028 KO:K14549 OMA:QFEGHTK
RefSeq:XP_662252.1 ProteinModelPortal:Q5B482 STRING:Q5B482
EnsemblFungi:CADANIAT00005783 GeneID:2872446 KEGG:ani:AN4648.2
OrthoDB:EOG4T4H3P Uniprot:Q5B482
Length = 541
Score = 133 (51.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 42/156 (26%), Positives = 69/156 (44%)
Query: 50 NVFATVGGNRVTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGI 109
+VF G RV +Y ++ + + D + DG LVAG G
Sbjct: 68 DVFTVTTGARVQIYSIRTRKLLRTITRFDDTARGTDV-------RPDG-RILVAGDDTGT 119
Query: 110 IRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAG 169
++V DV + + K++ H + + P P+ V+SAS D +VRLW++ + I F G
Sbjct: 120 LQVFDVGSRAILKTWKDHKQPVWVAKFSPSDPTCVLSASDDRTVRLWDLPSENSIKSFVG 179
Query: 170 AGGHRNEVLSVDFHPSDIYR---IASCGMDNTVKIW 202
H + V + F P + + S D TV++W
Sbjct: 180 ---HSDYVRTAAFMPGSLASSGSLVSGSYDRTVRLW 212
>DICTYBASE|DDB_G0278285 [details] [associations]
symbol:copB2 "coatomer protein complex beta 2 subunit
(beta prime)" species:44689 "Dictyostelium discoideum" [GO:0030117
"membrane coat" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=ISS]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0278285 GO:GO:0006886 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GenomeReviews:CM000152_GR GO:GO:0005198 EMBL:AAFI02000023
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030126
HSSP:P63005 InterPro:IPR016453 PIRSF:PIRSF005567 OMA:LRNKAFG
RefSeq:XP_642264.1 ProteinModelPortal:Q54YD8 STRING:Q54YD8
EnsemblProtists:DDB0233798 GeneID:8621473 KEGG:ddi:DDB_G0278285
ProtClustDB:CLSZ2729111 Uniprot:Q54YD8
Length = 1005
Score = 144 (55.7 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 34/106 (32%), Positives = 58/106 (54%)
Query: 100 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 159
++V G + IRV + + + KSF H D I I P P ++S+S D ++LW+ +
Sbjct: 72 WIVTGSDDTYIRVYNYNTMEKIKSFEAHADYIRCIIVHPTLP-YILSSSDDMFIKLWDYE 130
Query: 160 TGIC-ILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
G +F G H + V+S+ ++P D + A+ +D TVK+WS+
Sbjct: 131 KGWSNTQVFEG---HSHYVMSIAWNPKDTNQFATASLDKTVKVWSI 173
Score = 124 (48.7 bits), Expect = 0.00027, P = 0.00027
Identities = 34/120 (28%), Positives = 57/120 (47%)
Query: 85 SFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIR--TQPLKPS 142
S Y +S A N ++ ++V +++ H + GH IN + + KP
Sbjct: 143 SHYVMSIAWNPKDTNQFATASLDKTVKVWSINSPHPHFTLEGHEKGINSVEYFSGGEKPY 202
Query: 143 LVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIW 202
L+ S + D+ V++W+ Q+ C+ G H N V V +HP ++ I S D TVK+W
Sbjct: 203 LI-SGADDKLVKIWDYQSKTCVQTLEG---HSNNVSVVCYHP-ELPLILSGSEDGTVKLW 257
Score = 37 (18.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 15/58 (25%), Positives = 24/58 (41%)
Query: 308 IGNREGKIF-VWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRW 364
I + K+ +W+ QS V H+ + S + + ILS EDG + W
Sbjct: 204 ISGADDKLVKIWDYQSKTCVQTLE-GHSNNVSVV---CYHPELPLILSGSEDGTVKLW 257
>ZFIN|ZDB-GENE-020905-2 [details] [associations]
symbol:copa "coatomer protein complex, subunit alpha"
species:7955 "Danio rerio" [GO:0030117 "membrane coat"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0030903 "notochord development" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-020905-2 GO:GO:0006886 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 GO:GO:0030903 HOGENOM:HOG000195913 InterPro:IPR016391
PIRSF:PIRSF003354 HOVERGEN:HBG005379 EMBL:AY294009 IPI:IPI00509057
UniGene:Dr.2921 ProteinModelPortal:Q6JWU9 STRING:Q6JWU9
InParanoid:Q6JWU9 NextBio:20804725 ArrayExpress:Q6JWU9
Uniprot:Q6JWU9
Length = 1226
Score = 142 (55.0 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 32/106 (30%), Positives = 56/106 (52%)
Query: 99 PFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 158
P V+GG + I+V + + + +GH D I P ++SAS D+++R+WN
Sbjct: 64 PLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYP-WILSASDDQTIRIWNW 122
Query: 159 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
Q+ C+ + G H + V+ FHPS+ + S +D TV++W +
Sbjct: 123 QSRTCVCVLTG---HNHYVMCAQFHPSEDL-VVSASLDQTVRVWDI 164
Score = 41 (19.5 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 239 HSNYVDCNRW--LGDFILSKSVDNEIVLWE 266
H N V C + + ILS S D I +W+
Sbjct: 249 HYNNVSCAVFHPRQELILSNSEDKSIRVWD 278
>ASPGD|ASPL0000037303 [details] [associations]
symbol:copA species:162425 "Emericella nidulans"
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0001411 "hyphal
tip" evidence=IDA] [GO:0030448 "hyphal growth" evidence=IMP]
[GO:0000280 "nuclear division" evidence=IMP] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001306 InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0030126
InterPro:IPR016391 PIRSF:PIRSF003354 OMA:YDQHNPF
ProteinModelPortal:C8VIU7 EnsemblFungi:CADANIAT00010053
Uniprot:C8VIU7
Length = 1205
Score = 137 (53.3 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 33/106 (31%), Positives = 55/106 (51%)
Query: 99 PFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 158
P V+GG + I+V + + + GH D + + P P ++SAS D+++R+WN
Sbjct: 64 PLFVSGGDDYKIKVWNYQTRRCLFTLNGHLDYVRTVFFHPELP-WILSASDDQTIRIWNW 122
Query: 159 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
Q I G H + V+ FHP++ IAS +D +V+IW +
Sbjct: 123 QNRSLICTMTG---HNHYVMCAQFHPTEDL-IASASLDQSVRIWDI 164
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 139 (54.0 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 54/167 (32%), Positives = 80/167 (47%)
Query: 38 AVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVD 96
+VVF+ DSR + A+ +R V +++ G L + ED E+S VS+A +
Sbjct: 352 SVVFSH-DSR---LIASGSNDRTVRIWETTTG-----LLRHTFEDHEDSVMAVSFAHDSR 402
Query: 97 GIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLW 156
+ GG N +++ D L GH D +N + P L+ SAS D +V++W
Sbjct: 403 RLASASDGG-N--VKIWDTRTGSLQNVLEGHDDCVNSVSFSP-DSRLLASASDDRTVKIW 458
Query: 157 NVQTGICILIFAGAGGHRNEVLSVDF-HPSDIYRIASCGMDNTVKIW 202
+ TG + GH + V SV F H S + IAS D TVKIW
Sbjct: 459 HAATGS---LQRTLEGHNDWVRSVVFSHDSRL--IASASDDMTVKIW 500
Score = 126 (49.4 bits), Expect = 0.00033, P = 0.00033
Identities = 32/97 (32%), Positives = 50/97 (51%)
Query: 110 IRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAG 169
+++ D + L + GH D +N + P L+ SAS D +V++W TG F G
Sbjct: 539 VKIWDTATGSLENTLEGHDDRVNSVSFSP-DSRLLASASDDGTVKIWYAATGTVQHTFDG 597
Query: 170 AGGHRNEVLSVDF-HPSDIYRIASCGMDNTVKIWSMK 205
+G +S+ F H S++ +AS D TVKIW M+
Sbjct: 598 SG---RVAISLAFSHTSNL--LASAMDDGTVKIWDME 629
>UNIPROTKB|F1N575 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:DAAA02061261
EMBL:DAAA02061262 IPI:IPI00905134 Ensembl:ENSBTAT00000048510
ArrayExpress:F1N575 Uniprot:F1N575
Length = 585
Score = 130 (50.8 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 29/89 (32%), Positives = 48/89 (53%)
Query: 124 FVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFH 183
+ GH ++ ++ P + + + S D++VRLW+ Q G + +F G HR VLS+ F
Sbjct: 418 YAGHLADVDCVKFHP-NSNYLATGSTDKTVRLWSTQQGNSVRLFTG---HRGPVLSLAFS 473
Query: 184 PSDIYRIASCGMDNTVKIWSMKEFWTYVE 212
P+ Y +AS G D +K+W + Y E
Sbjct: 474 PNGKY-LASAGEDQRLKLWDLASGTLYKE 501
Score = 122 (48.0 bits), Expect = 0.00022, P = 0.00022
Identities = 26/106 (24%), Positives = 52/106 (49%)
Query: 100 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 159
+L G + +R+ + F GH + + P + SA +D+ ++LW++
Sbjct: 436 YLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSP-NGKYLASAGEDQRLKLWDLA 494
Query: 160 TGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
+G ++ GH + + S+ F P D +AS MDN+V++W ++
Sbjct: 495 SGT---LYKELRGHTDNITSLTFSP-DSSLVASASMDNSVRVWDIR 536
Score = 46 (21.3 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 11/51 (21%), Positives = 29/51 (56%)
Query: 253 ILSKSVDNEIVLWEPKMKEQS-PGEGTA-DILQKYPVPECDIWFIKF-SCD 300
+ S S+DN + +W+ + S P +G++ +++ Y ++ ++F +C+
Sbjct: 521 VASASMDNSVRVWDIRSSHCSTPADGSSSELVGVYTGQMSNVLSVQFMACN 571
>UNIPROTKB|H9L3L2 [details] [associations]
symbol:LOC100859596 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006886 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030126 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 EMBL:AADN02074020 EMBL:AADN02074019
Ensembl:ENSGALT00000040760 Uniprot:H9L3L2
Length = 1134
Score = 141 (54.7 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 32/106 (30%), Positives = 56/106 (52%)
Query: 99 PFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 158
P V+GG + I+V + + + +GH D I P ++SAS D+++R+WN
Sbjct: 64 PLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYP-WILSASDDQTIRVWNW 122
Query: 159 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
Q+ C+ + G H + V+ FHPS+ + S +D TV++W +
Sbjct: 123 QSRTCVCVLTG---HNHYVMCAQFHPSEDL-VVSASLDQTVRVWDI 164
Score = 41 (19.5 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 239 HSNYVDCNRW--LGDFILSKSVDNEIVLWE 266
H N V C + + ILS S D I +W+
Sbjct: 248 HYNNVSCAVFHPRQELILSNSEDKSIRVWD 277
>TAIR|locus:2161840 [details] [associations]
symbol:TEX1 "AT5G56130" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0010267 "production of
ta-siRNAs involved in RNA interference" evidence=IMP] [GO:0031047
"gene silencing by RNA" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 KO:K12880 GO:GO:0010267
EMBL:AB011476 HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000264781
OMA:LAYACDD UniGene:At.29405 UniGene:At.29406 EMBL:AY093120
EMBL:BT000174 IPI:IPI00517881 RefSeq:NP_200424.1
ProteinModelPortal:Q9FKT5 SMR:Q9FKT5 STRING:Q9FKT5 PaxDb:Q9FKT5
PRIDE:Q9FKT5 EnsemblPlants:AT5G56130.1 GeneID:835712
KEGG:ath:AT5G56130 TAIR:At5g56130 InParanoid:Q9FKT5
PhylomeDB:Q9FKT5 ProtClustDB:CLSN2687157 ArrayExpress:Q9FKT5
Genevestigator:Q9FKT5 Uniprot:Q9FKT5
Length = 315
Score = 113 (44.8 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 35/149 (23%), Positives = 73/149 (48%)
Query: 73 ALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKS----FVGHG 128
+L S + ++ ++V+W N +G L +G ++ R+ ++ K+ GH
Sbjct: 10 SLHSREYQGHKKKVHSVAW--NSNGTK-LASGSVDQTARIWNIEPHGHSKAKDLELKGHT 66
Query: 129 DSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIY 188
DS++++ P LV +AS D+SVRLW+ ++G C +G E +++ + P +
Sbjct: 67 DSVDQLCWDPKHSDLVATASGDKSVRLWDARSGKCTQQVELSG----ENINITYKPDGTH 122
Query: 189 RIASCGMDNTVKIWSMKEFWTYVEKSFTW 217
+A D+ + I +++F + F +
Sbjct: 123 -VAVGNRDDELTILDVRKFKPLHRRKFNY 150
Score = 56 (24.8 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 13/52 (25%), Positives = 27/52 (51%)
Query: 307 AIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCED 358
A+G+ + + +W++ +L R + + + P+R + +Y G I S ED
Sbjct: 207 AVGSADSLVSLWDISD---MLCLR-TFTKLEWPVRTISFNYSGEYIASASED 254
>UNIPROTKB|Q9W5Z5 [details] [associations]
symbol:wsb1 "WD repeat and SOCS box-containing protein 1"
species:31033 "Takifugu rubripes" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001496 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082 PROSITE:PS50225
PROSITE:PS50294 SMART:SM00253 SMART:SM00320 SMART:SM00969
UniPathway:UPA00143 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
CTD:26118 OrthoDB:EOG40ZQXJ EMBL:AF157597 EMBL:AF064564
RefSeq:NP_001027919.1 UniGene:Tru.1848 ProteinModelPortal:Q9W5Z5
STRING:Q9W5Z5 GeneID:445931 KEGG:tru:445931 InParanoid:Q9W5Z5
Uniprot:Q9W5Z5
Length = 427
Score = 131 (51.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 44/151 (29%), Positives = 73/151 (48%)
Query: 68 GGVI--AALQSYVDEDKEESFYTVSWACNVDGIP-FLVAGGIN-GIIRVIDVSNEKLHKS 123
GG++ A S V E + S + W G L+A G+N G I++ DV L +
Sbjct: 112 GGIVWGMAFGSSVPEKQSRSI-NIEWHHFQFGRDQLLLATGLNNGRIKIWDVYTGTLLLN 170
Query: 124 FVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT-GICILIFAGAGGHRNEVLSVDF 182
+ H D + ++ P ++VSAS D+ +R+W+++ G + + GH N V S F
Sbjct: 171 LMDHTDIVRDLTFAPDGSLMLVSASTDKKLRVWDLKDDGNMVKVL---WGHPNRVYSSAF 227
Query: 183 HPSDIYRIASCGMDNTVKIWSMKEFWTYVEK 213
P D + S G V +W+M ++ T + K
Sbjct: 228 SP-DSSVLCSVGASKAVLLWNMDKY-TLIRK 256
>UNIPROTKB|H9KZL3 [details] [associations]
symbol:LOC100859596 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0030157
"pancreatic juice secretion" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 EMBL:AADN02074020 EMBL:AADN02074019
Ensembl:ENSGALT00000014909 OMA:ENSVLLC Uniprot:H9KZL3
Length = 1169
Score = 141 (54.7 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 32/106 (30%), Positives = 56/106 (52%)
Query: 99 PFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 158
P V+GG + I+V + + + +GH D I P ++SAS D+++R+WN
Sbjct: 64 PLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYP-WILSASDDQTIRVWNW 122
Query: 159 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
Q+ C+ + G H + V+ FHPS+ + S +D TV++W +
Sbjct: 123 QSRTCVCVLTG---HNHYVMCAQFHPSEDL-VVSASLDQTVRVWDI 164
Score = 41 (19.5 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 239 HSNYVDCNRW--LGDFILSKSVDNEIVLWE 266
H N V C + + ILS S D I +W+
Sbjct: 248 HYNNVSCAVFHPRQELILSNSEDKSIRVWD 277
>POMBASE|SPBC1718.01 [details] [associations]
symbol:pop1 "cullin 1 adaptor protein Pop1" species:4896
"Schizosaccharomyces pombe" [GO:0000747 "conjugation with cellular
fusion" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0006995 "cellular response to nitrogen
starvation" evidence=IGI] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IC] [GO:0008054 "cyclin catabolic process"
evidence=IMP] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0030674 "protein binding, bridging" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
PomBase:SPBC1718.01 GO:GO:0005634 GO:GO:0007346 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR SUPFAM:SSF81383 GO:GO:0019005
GO:GO:0008054 GO:GO:0006995 GO:GO:0000747 KO:K03361
OrthoDB:EOG4B2X5M EMBL:Y08391 PIR:T45136 PIR:T50329
RefSeq:XP_001713146.1 ProteinModelPortal:P87060 IntAct:P87060
STRING:P87060 EnsemblFungi:SPBC1718.01.1 GeneID:2540511
KEGG:spo:SPBC1718.01 OMA:NRCISAS NextBio:20801638 Uniprot:P87060
Length = 775
Score = 125 (49.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 28/80 (35%), Positives = 44/80 (55%)
Query: 126 GHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPS 185
GH DS+ E+ L+VSAS D ++R+W TG+C+ + G H V SV +PS
Sbjct: 575 GHTDSVREVACLG---DLIVSASYDGTLRVWKASTGVCLHVLRG---HVGRVYSVTINPS 628
Query: 186 DIYRIASCGMDNTVKIWSMK 205
+ S G D ++IW+++
Sbjct: 629 R-QQCISAGTDAKIRIWNLE 647
Score = 54 (24.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 25/120 (20%), Positives = 49/120 (40%)
Query: 19 KKREYRVTNKLQEGKRPLYAVVFNFIDSRYFN---VFATVGGNRVTVYQCLEGGVIAALQ 75
++R K++ P++ V I F+ + + R+ +Y G +I +L
Sbjct: 386 RERWLHAPEKIKRCSFPIHGV--RLITKLQFDDDKIIVSTCSPRINIYDTKTGVLIRSL- 442
Query: 76 SYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIR 135
E+ E +T + + LV G + +RV D+ + + F GH +I I+
Sbjct: 443 ----EEHEGDVWTFEYVGDT-----LVTGSTDRTVRVWDLRTGECKQVFYGHTSTIRCIK 493
>CGD|CAL0005013 [details] [associations]
symbol:SWD3 species:5476 "Candida albicans" [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0042800 "histone
methyltransferase activity (H3-K4 specific)" evidence=IEA]
[GO:0051568 "histone H3-K4 methylation" evidence=IEA] [GO:0006348
"chromatin silencing at telomere" evidence=IEA] [GO:0000723
"telomere maintenance" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0005013 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000155
RefSeq:XP_712497.1 ProteinModelPortal:Q59S83 STRING:Q59S83
GeneID:3645890 KEGG:cal:CaO19.3457 Uniprot:Q59S83
Length = 383
Score = 130 (50.8 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 68/276 (24%), Positives = 113/276 (40%)
Query: 110 IRVIDVSNEKLHKSFVGHGDSINEIR-TQPLKPSLVVSASKDESVRLWNVQT-GICILIF 167
IR+ +++ ++ K H I ++ TQ K ++++S S DE++ +W++ + G IL
Sbjct: 93 IRLWNITQQRCIKLLRKHTYHITTLKFTQ--KGNILISGSSDETITIWDITSNGGKILTT 150
Query: 168 AGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKE---FWTYVEKSFTWTDLPSKF 224
A H + V S+ P D I S D ++++ ++ T +F +
Sbjct: 151 LAA--HSDPVSSIALTPDDSI-IVSASYDGLMRLFDLQTSQCLKTLTNSTFGGHGTATAS 207
Query: 225 PTKYVQFPVFIASVHSNYVDCNRWLGDFILSKSVDNEIVLW---EPKMKEQSPGEGTADI 281
+ FP+ + N G FIL+ S+D +I LW E K+ + G I
Sbjct: 208 TNDVINFPIAKVELSPN--------GQFILNSSLDGKIRLWNYMENKVYKTYQGINGEKI 259
Query: 282 LQKYPVPECDIWFIKFSC-------------DFHYNAAAI--GNREGKIFVWELQSSPPV 326
+K+ CDI FI + D YN I G+ + +W++QS V
Sbjct: 260 CEKF---NCDIKFITRNVNSNAITITSNNNDDEQYNNVLIVSGSDSTGLLIWDIQSKQIV 316
Query: 327 LIARLSHAQSKSPIRQTAMSYDGSTILSCCE-DGAI 361
K I +Y IL CC DG I
Sbjct: 317 FQVD-PQTCGKDAILGVD-TYKQGEILGCCSRDGII 350
Score = 108 (43.1 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 31/128 (24%), Positives = 57/128 (44%)
Query: 77 YVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRT 136
Y + +F + ++ N G F + NG I + + + KL + GH I++I
Sbjct: 20 YTINEPSITFTAIKFSPN--GQNFACSSS-NGKIYIYNTTTGKLITTLSGHTKGISDIVY 76
Query: 137 QPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMD 196
P+ +++ S S D ++RLWN+ CI + H + ++ F I+ D
Sbjct: 77 SPINSNILASCSDDLTIRLWNITQQRCIKLLRK---HTYHITTLKFTQKGNILISGSS-D 132
Query: 197 NTVKIWSM 204
T+ IW +
Sbjct: 133 ETITIWDI 140
Score = 62 (26.9 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 17/62 (27%), Positives = 32/62 (51%)
Query: 304 NAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWR 363
N G+ + I +W++ S+ ++ L+ A S P+ A++ D S I+S DG +
Sbjct: 124 NILISGSSDETITIWDITSNGGKILTTLA-AHS-DPVSSIALTPDDSIIVSASYDGLMRL 181
Query: 364 WD 365
+D
Sbjct: 182 FD 183
>POMBASE|SPBC354.03 [details] [associations]
symbol:swd3 "WD repeat protein Swd3" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IC] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006342 "chromatin silencing" evidence=IC] [GO:0048188
"Set1C/COMPASS complex" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC354.03 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006338 GO:GO:0000790 GO:GO:0006342
GO:GO:0048188 GO:GO:0051568 PIR:T40283 RefSeq:NP_595227.1
ProteinModelPortal:O43017 STRING:O43017 EnsemblFungi:SPBC354.03.1
GeneID:2540929 KEGG:spo:SPBC354.03 KO:K14963 OrthoDB:EOG49CTJ0
NextBio:20802044 Uniprot:O43017
Length = 380
Score = 126 (49.4 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 34/116 (29%), Positives = 55/116 (47%)
Query: 89 VSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSAS 148
V WA G +L + + IR+ D + GH + ++ I PL +L+VS S
Sbjct: 102 VKWAT---GSKYLASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPLG-TLLVSGS 157
Query: 149 KDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
DE+VR+WN+Q G C+ + H ++SV +D A+ D +IW +
Sbjct: 158 WDETVRIWNLQDGTCLRMLPA---HSEPIISVSIS-ADGTLCATASYDGMARIWDV 209
Score = 44 (20.5 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 249 LGDFILSKSVDNEIVLWEPKM 269
LG FI++ D + +W P +
Sbjct: 348 LGPFIITSGTDPYVRVWAPSL 368
>UNIPROTKB|F1PU93 [details] [associations]
symbol:COPA "Coatomer subunit alpha" species:9615 "Canis
lupus familiaris" [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 OMA:FWVLGAH EMBL:AAEX03018465
EMBL:AAEX03018466 Ensembl:ENSCAFT00000019919 Uniprot:F1PU93
Length = 1214
Score = 141 (54.7 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 32/106 (30%), Positives = 56/106 (52%)
Query: 99 PFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 158
P V+GG + I+V + + + +GH D I P ++SAS D+++R+WN
Sbjct: 54 PLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYP-WILSASDDQTIRVWNW 112
Query: 159 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
Q+ C+ + G H + V+ FHPS+ + S +D TV++W +
Sbjct: 113 QSRTCVCVLTG---HNHYVMCAQFHPSEDL-VVSASLDQTVRVWDI 154
Score = 41 (19.5 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 239 HSNYVDCNRW--LGDFILSKSVDNEIVLWE 266
H N V C + + ILS S D I +W+
Sbjct: 238 HYNNVSCAVFHPRQELILSNSEDKSIRVWD 267
>UNIPROTKB|I3LI24 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9823 "Sus scrofa" [GO:2001244 "positive
regulation of intrinsic apoptotic signaling pathway" evidence=IEA]
[GO:0051898 "negative regulation of protein kinase B signaling
cascade" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0050765 "negative regulation of phagocytosis"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0043547 "positive regulation of GTPase activity"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0042169 "SH2 domain binding" evidence=IEA]
[GO:0032464 "positive regulation of protein homooligomerization"
evidence=IEA] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0030971 "receptor tyrosine kinase binding" evidence=IEA]
[GO:0030496 "midbody" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030335 "positive regulation of cell migration"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0008656 "cysteine-type endopeptidase activator
activity involved in apoptotic process" evidence=IEA] [GO:0008200
"ion channel inhibitor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0001891 "phagocytic cup"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0048471 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0043547 GO:GO:0043025 GO:GO:0030425
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0008200 GO:GO:2001244
GO:GO:0032464 GO:GO:0030292 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 Ensembl:ENSSSCT00000022602
Uniprot:I3LI24
Length = 317
Score = 125 (49.1 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 32/110 (29%), Positives = 53/110 (48%)
Query: 96 DGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRL 155
DG F ++G +G +R+ D++ + FVGH + + +VS S+D++++L
Sbjct: 74 DG-QFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQ-IVSGSRDKTIKL 131
Query: 156 WNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRI-ASCGMDNTVKIWSM 204
WN G+C H V V F P+ I SCG D V +W++
Sbjct: 132 WNT-LGVCKYTVQDES-HSEWVSCVRFSPNSSNPIIVSCGWDKLVNVWNL 179
Score = 42 (19.8 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 13/49 (26%), Positives = 19/49 (38%)
Query: 317 VWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWD 365
VW L + + +H + +S DGS S +DG WD
Sbjct: 176 VWNLANCK----LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWD 220
>UNIPROTKB|Q27954 [details] [associations]
symbol:COPA "Coatomer subunit alpha" species:9913 "Bos
taurus" [GO:0005515 "protein binding" evidence=IPI] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=TAS]
[GO:0030126 "COPI vesicle coat" evidence=IDA] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=TAS] [GO:0030157
"pancreatic juice secretion" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005179 "hormone activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006886 GO:GO:0005615
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030157 GO:GO:0006891 GO:GO:0030126
GO:GO:0006890 HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 EMBL:X96768 EMBL:BC153251 IPI:IPI00904110
RefSeq:NP_001099115.1 UniGene:Bt.76408 PDB:3MKR PDBsum:3MKR
ProteinModelPortal:Q27954 IntAct:Q27954 STRING:Q27954 PRIDE:Q27954
Ensembl:ENSBTAT00000005672 GeneID:100126041 KEGG:bta:100126041
CTD:1314 GeneTree:ENSGT00600000084501 HOVERGEN:HBG005379
EvolutionaryTrace:Q27954 NextBio:20788926 Uniprot:Q27954
Length = 1224
Score = 141 (54.7 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 32/106 (30%), Positives = 56/106 (52%)
Query: 99 PFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 158
P V+GG + I+V + + + +GH D I P ++SAS D+++R+WN
Sbjct: 64 PLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYP-WILSASDDQTIRVWNW 122
Query: 159 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
Q+ C+ + G H + V+ FHPS+ + S +D TV++W +
Sbjct: 123 QSRTCVCVLTG---HNHYVMCAQFHPSEDL-VVSASLDQTVRVWDI 164
Score = 41 (19.5 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 239 HSNYVDCNRW--LGDFILSKSVDNEIVLWE 266
H N V C + + ILS S D I +W+
Sbjct: 248 HYNNVSCAVFHPRQELILSNSEDKSIRVWD 277
>UNIPROTKB|F1RJX8 [details] [associations]
symbol:COPA "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030157 "pancreatic juice secretion" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006886 GO:GO:0005615
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030157 GO:GO:0030126 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 CTD:1314 GeneTree:ENSGT00600000084501 OMA:FWVLGAH
EMBL:CU207285 RefSeq:XP_001928742.1 UniGene:Ssc.96897
Ensembl:ENSSSCT00000006999 GeneID:100157296 KEGG:ssc:100157296
Uniprot:F1RJX8
Length = 1224
Score = 141 (54.7 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 32/106 (30%), Positives = 56/106 (52%)
Query: 99 PFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 158
P V+GG + I+V + + + +GH D I P ++SAS D+++R+WN
Sbjct: 64 PLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYP-WILSASDDQTIRVWNW 122
Query: 159 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
Q+ C+ + G H + V+ FHPS+ + S +D TV++W +
Sbjct: 123 QSRTCVCVLTG---HNHYVMCAQFHPSEDL-VVSASLDQTVRVWDI 164
Score = 41 (19.5 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 239 HSNYVDCNRW--LGDFILSKSVDNEIVLWE 266
H N V C + + ILS S D I +W+
Sbjct: 248 HYNNVSCAVFHPRQELILSNSEDKSIRVWD 277
>MGI|MGI:1334462 [details] [associations]
symbol:Copa "coatomer protein complex subunit alpha"
species:10090 "Mus musculus" [GO:0005179 "hormone activity"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005615 "extracellular space" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=ISO] [GO:0030157 "pancreatic juice
secretion" evidence=ISO] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1334462 GO:GO:0006886
GO:GO:0005615 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030157 GO:GO:0030126
HSSP:P63005 HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 CTD:1314 GeneTree:ENSGT00600000084501
HOVERGEN:HBG005379 ChiTaRS:COPA EMBL:AC158930 EMBL:BC024070
EMBL:BC047429 IPI:IPI00229834 RefSeq:NP_034068.3 UniGene:Mm.30041
ProteinModelPortal:Q8CIE6 SMR:Q8CIE6 IntAct:Q8CIE6 STRING:Q8CIE6
PhosphoSite:Q8CIE6 PaxDb:Q8CIE6 PRIDE:Q8CIE6
Ensembl:ENSMUST00000135192 GeneID:12847 KEGG:mmu:12847
UCSC:uc007dpn.2 InParanoid:Q8CIE6 NextBio:282392 Bgee:Q8CIE6
Genevestigator:Q8CIE6 Uniprot:Q8CIE6
Length = 1224
Score = 141 (54.7 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 32/106 (30%), Positives = 56/106 (52%)
Query: 99 PFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 158
P V+GG + I+V + + + +GH D I P ++SAS D+++R+WN
Sbjct: 64 PLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYP-WILSASDDQTIRVWNW 122
Query: 159 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
Q+ C+ + G H + V+ FHPS+ + S +D TV++W +
Sbjct: 123 QSRTCVCVLTG---HNHYVMCAQFHPSEDL-VVSASLDQTVRVWDI 164
Score = 41 (19.5 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 239 HSNYVDCNRW--LGDFILSKSVDNEIVLWE 266
H N V C + + ILS S D I +W+
Sbjct: 248 HYNNVSCAVFHPRQELILSNSEDKSIRVWD 277
>UNIPROTKB|G3V6T1 [details] [associations]
symbol:Copa "Protein Copa" species:10116 "Rattus
norvegicus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=IEA] [GO:0030157 "pancreatic juice
secretion" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310525 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
CTD:1314 GeneTree:ENSGT00600000084501 OMA:FWVLGAH EMBL:CH473985
RefSeq:NP_001128012.1 UniGene:Rn.203109 ProteinModelPortal:G3V6T1
PRIDE:G3V6T1 Ensembl:ENSRNOT00000008518 GeneID:304978
KEGG:rno:304978 NextBio:653932 Uniprot:G3V6T1
Length = 1224
Score = 141 (54.7 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 32/106 (30%), Positives = 56/106 (52%)
Query: 99 PFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 158
P V+GG + I+V + + + +GH D I P ++SAS D+++R+WN
Sbjct: 64 PLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYP-WILSASDDQTIRVWNW 122
Query: 159 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
Q+ C+ + G H + V+ FHPS+ + S +D TV++W +
Sbjct: 123 QSRTCVCVLTG---HNHYVMCAQFHPSEDL-VVSASLDQTVRVWDI 164
Score = 41 (19.5 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 239 HSNYVDCNRW--LGDFILSKSVDNEIVLWE 266
H N V C + + ILS S D I +W+
Sbjct: 248 HYNNVSCAVFHPRQELILSNSEDKSIRVWD 277
>UNIPROTKB|E1BQV9 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00594543
ProteinModelPortal:E1BQV9 Ensembl:ENSGALT00000001552
ArrayExpress:E1BQV9 Uniprot:E1BQV9
Length = 660
Score = 133 (51.9 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 33/118 (27%), Positives = 60/118 (50%)
Query: 93 CNVDGIP---FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASK 149
C++D P F+ +G ++ I++ DV + + H ++ +R P + SA+
Sbjct: 108 CSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSP-DGKWLASAAD 166
Query: 150 DESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEF 207
D +V+LW++ G + F G H V V+FHPS Y +AS T++ W +++F
Sbjct: 167 DHTVKLWDLTAGKVMFEFTG---HYGPVNVVEFHPSIEYLLASGSSSMTIRFWDLEKF 221
Score = 132 (51.5 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 34/104 (32%), Positives = 54/104 (51%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
+VAG +G IRV D+ K+ ++ +GH +I + P S V S S D ++LW+V+
Sbjct: 77 IVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYG-SFVASGSLDTDIKLWDVRR 135
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
CI + H V + F P + +AS D+TVK+W +
Sbjct: 136 KGCIFKYKS---HTQAVRCLRFSPDGKW-LASAADDHTVKLWDL 175
Score = 122 (48.0 bits), Expect = 0.00026, P = 0.00026
Identities = 28/105 (26%), Positives = 53/105 (50%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
L GG + + V V+ + H GH I ++ K L+V+ S+ S+R+W+++
Sbjct: 36 LATGGDDCRVNVWSVAQLR-HDLLTGHTTPIESLQISA-KEELIVAGSQSGSIRVWDLEA 93
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
+ G H+ + S+DFHP + +AS +D +K+W ++
Sbjct: 94 AKILRTLLG---HKANICSLDFHPYGSF-VASGSLDTDIKLWDVR 134
>UNIPROTKB|F1P0F4 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00821846
Ensembl:ENSGALT00000040449 ArrayExpress:F1P0F4 Uniprot:F1P0F4
Length = 661
Score = 133 (51.9 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 33/118 (27%), Positives = 60/118 (50%)
Query: 93 CNVDGIP---FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASK 149
C++D P F+ +G ++ I++ DV + + H ++ +R P + SA+
Sbjct: 109 CSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSP-DGKWLASAAD 167
Query: 150 DESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEF 207
D +V+LW++ G + F G H V V+FHPS Y +AS T++ W +++F
Sbjct: 168 DHTVKLWDLTAGKVMFEFTG---HYGPVNVVEFHPSIEYLLASGSSSMTIRFWDLEKF 222
Score = 132 (51.5 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 34/104 (32%), Positives = 54/104 (51%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
+VAG +G IRV D+ K+ ++ +GH +I + P S V S S D ++LW+V+
Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYG-SFVASGSLDTDIKLWDVRR 136
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
CI + H V + F P + +AS D+TVK+W +
Sbjct: 137 KGCIFKYKS---HTQAVRCLRFSPDGKW-LASAADDHTVKLWDL 176
Score = 125 (49.1 bits), Expect = 0.00012, P = 0.00012
Identities = 28/105 (26%), Positives = 52/105 (49%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
L GG + + V V+ S GH I ++ K L+V+ S+ S+R+W+++
Sbjct: 36 LATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISA-KEELIVAGSQSGSIRVWDLEA 94
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
+ G H+ + S+DFHP + +AS +D +K+W ++
Sbjct: 95 AKILRTLLG---HKANICSLDFHPYGSF-VASGSLDTDIKLWDVR 135
>WB|WBGene00022119 [details] [associations]
symbol:Y71F9AL.17 species:6239 "Caenorhabditis elegans"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0032940 "secretion by cell"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR011041 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009792 GO:GO:0040010
GO:GO:0006915 GO:GO:0006886 GO:GO:0003824 GO:GO:0002119
GO:GO:0032940 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0000003
GO:GO:0008152 GO:GO:0030126 EMBL:FO081777 HOGENOM:HOG000195913
KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 OMA:YDQHNPF SUPFAM:SSF50952
RefSeq:NP_491069.1 ProteinModelPortal:Q9N4H7 SMR:Q9N4H7
DIP:DIP-24621N IntAct:Q9N4H7 MINT:MINT-1075577 STRING:Q9N4H7
PaxDb:Q9N4H7 EnsemblMetazoa:Y71F9AL.17 GeneID:171860
KEGG:cel:CELE_Y71F9AL.17 UCSC:Y71F9AL.17 CTD:171860
WormBase:Y71F9AL.17 InParanoid:Q9N4H7 NextBio:873005 Uniprot:Q9N4H7
Length = 1232
Score = 141 (54.7 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 34/106 (32%), Positives = 57/106 (53%)
Query: 99 PFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 158
P V+GG + I+V + ++ + +GH D I P ++SAS D++VR+WN
Sbjct: 66 PIFVSGGDDYKIKVWNYKQKRCIFTLLGHLDYIRTTFFHHKYP-WIISASDDQTVRIWNW 124
Query: 159 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
Q+ I I G H + V+ FHP++ +AS +D TV++W +
Sbjct: 125 QSRNSIAILTG---HNHYVMCAQFHPTEDL-VASASLDQTVRVWDI 166
Score = 41 (19.5 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 251 DFILSKSVDNEIVLWE 266
D ILS S D I +W+
Sbjct: 264 DLILSNSEDKSIRVWD 279
>UNIPROTKB|F1S845 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:ERQNNQI ProteinModelPortal:F1S845 Ensembl:ENSSSCT00000011591
Uniprot:F1S845
Length = 542
Score = 129 (50.5 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 31/105 (29%), Positives = 54/105 (51%)
Query: 100 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 159
+ V+GG + + R+ + + + F GH +N R P + V + S D +VRLW+V
Sbjct: 359 YFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHP-NSNYVATGSADRTVRLWDVL 417
Query: 160 TGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
G C+ IF G H+ + S+ F P+ + +A+ D V +W +
Sbjct: 418 NGNCVRIFTG---HKGPIHSLTFSPNGRF-LATGATDGRVLLWDI 458
Score = 108 (43.1 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 26/97 (26%), Positives = 46/97 (47%)
Query: 111 RVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGA 170
R++D K GH + P + + ++S+S+D +VRLW++QT C++ G
Sbjct: 286 RIMDEKTASELKILYGHSGPVYGASFSPDR-NYLLSSSEDGTVRLWSLQTFTCLV---GY 341
Query: 171 GGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEF 207
GH V F P Y ++ G D ++W+ +
Sbjct: 342 KGHNYPVWDTQFSPYGYYFVSG-GHDRVARLWATDHY 377
Score = 58 (25.5 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 18/67 (26%), Positives = 30/67 (44%)
Query: 301 FHYNA--AAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCED 358
FH N+ A G+ + + +W++ + V I H K PI S +G + + D
Sbjct: 395 FHPNSNYVATGSADRTVRLWDVLNGNCVRIFT-GH---KGPIHSLTFSPNGRFLATGATD 450
Query: 359 GAIWRWD 365
G + WD
Sbjct: 451 GRVLLWD 457
Score = 45 (20.9 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 250 GDFILSKSVDNEIVLWEP-KMKEQSPGEGTADIL 282
G+ + S S+DN + LW+ K E + + ++L
Sbjct: 483 GEILASGSMDNTVRLWDAVKAFEDLETDNSQELL 516
>TAIR|locus:2150788 [details] [associations]
symbol:AT5G08390 "AT5G08390" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090
"trichome morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0042546 "cell
wall biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0080008
GO:GO:0008352 PANTHER:PTHR19845 OMA:YWERNDI IPI:IPI00533677
RefSeq:NP_568194.2 UniGene:At.10141 UniGene:At.72630
ProteinModelPortal:F4KB17 SMR:F4KB17 PRIDE:F4KB17
EnsemblPlants:AT5G08390.1 GeneID:830737 KEGG:ath:AT5G08390
Uniprot:F4KB17
Length = 839
Score = 134 (52.2 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 28/108 (25%), Positives = 56/108 (51%)
Query: 100 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 159
F +G ++ +++ D+ + ++ GH +N +R P +VS +D V++W++
Sbjct: 115 FFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTP-DGRWIVSGGEDNVVKVWDLT 173
Query: 160 TGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEF 207
G + F H ++ S+DFHP + + +A+ D TVK W ++ F
Sbjct: 174 AGKLLHEFKS---HEGKIQSLDFHPHE-FLLATGSADKTVKFWDLETF 217
Score = 113 (44.8 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 27/106 (25%), Positives = 51/106 (48%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
LV GG + + + + S GH I+ + T LV + + +++LW+++
Sbjct: 32 LVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSV-TFDASEGLVAAGAASGTIKLWDLEE 90
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKE 206
+ G HR+ +SV+FHP + AS +D +KIW +++
Sbjct: 91 AKVVRTLTG---HRSNCVSVNFHPFGEF-FASGSLDTNLKIWDIRK 132
Score = 50 (22.7 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 31/134 (23%), Positives = 60/134 (44%)
Query: 239 HSNYVDCNRWLGD--FILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIK 296
H+ V+ R+ D +I+S DN + +W+ + G+ +L ++ E I
Sbjct: 142 HTRGVNVLRFTPDGRWIVSGGEDNVVKVWD-----LTAGK----LLHEFKSHEGKIQ--- 189
Query: 297 FSCDFHYNA--AAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILS 354
S DFH + A G+ + + W+L++ LI S + +R + DG ++L
Sbjct: 190 -SLDFHPHEFLLATGSADKTVKFWDLETFE--LIG--SGGTETTGVRCLTFNPDGKSVLC 244
Query: 355 CCEDGA-IWRWDAI 367
++ I+ W+ I
Sbjct: 245 GLQESLKIFSWEPI 258
>WB|WBGene00015974 [details] [associations]
symbol:C18E3.5 species:6239 "Caenorhabditis elegans"
[GO:0018991 "oviposition" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0018991 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 HOGENOM:HOG000091644
OMA:HAGSVNE EMBL:FO080611 GeneTree:ENSGT00690000101787
RefSeq:NP_491325.1 ProteinModelPortal:O02097 SMR:O02097
STRING:O02097 PaxDb:O02097 EnsemblMetazoa:C18E3.5.1
EnsemblMetazoa:C18E3.5.2 GeneID:172015 KEGG:cel:CELE_C18E3.5
UCSC:C18E3.5 CTD:172015 WormBase:C18E3.5 InParanoid:O02097
NextBio:873669 Uniprot:O02097
Length = 331
Score = 112 (44.5 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 30/82 (36%), Positives = 42/82 (51%)
Query: 126 GHGDSINEIRTQPLKP--SLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFH 183
GHG EI T S + SA D+ + LWNV G C FA GH+ ++ V F+
Sbjct: 34 GHG---GEIYTSQFSSDGSFLASAGYDQQIFLWNV-FGECEN-FAVLKGHKGAIMEVKFN 88
Query: 184 PSDIYRIASCGMDNTVKIWSMK 205
+D + S G D TV++W M+
Sbjct: 89 -ADSSHLVSAGTDKTVRVWDME 109
Score = 57 (25.1 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 31/128 (24%), Positives = 54/128 (42%)
Query: 241 NYVDCNRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCD 300
N VD NR I S S D +++ + + KE + + KY + F+ D
Sbjct: 125 NSVDVNRRGPQMICSASDDGTVMVHDMRSKEAAK-----KFICKYQQTA-----VTFN-D 173
Query: 301 FHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGA 360
N G + +I VW++ + V H + I ++S++G+ +LS D +
Sbjct: 174 AADNVIC-GGIDNQIKVWDMLRND-VRYVLSGH---RDTITSLSVSHNGNFLLSNSMDCS 228
Query: 361 IWRWDAIP 368
+ WD P
Sbjct: 229 LMSWDIRP 236
>UNIPROTKB|A8QB65 [details] [associations]
symbol:Bm1_47965 "Ribosome biogenesis protein WDR12
homolog" species:6279 "Brugia malayi" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070545
GO:GO:0000463 InterPro:IPR012972 Pfam:PF08154 KO:K14863
HAMAP:MF_03029 EMBL:DS239429 RefSeq:XP_001901055.1
ProteinModelPortal:A8QB65 GeneID:6104478 KEGG:bmy:Bm1_47965
CTD:6104478 Uniprot:A8QB65
Length = 433
Score = 130 (50.8 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 34/126 (26%), Positives = 73/126 (57%)
Query: 83 EESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEK---LHKSFVGHGDSINEIRTQPL 139
+++F ++S C+ G+ L+ G ++ ++R+ D + + + +SF+GH I+ + +
Sbjct: 314 KKAFTSISVCCS-SGM--LITGSVDPVVRLWDPRSHEGTLVKQSFIGHCGWISSVFWNKV 370
Query: 140 KPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTV 199
K +L +SAS D++V++W+V++ L GH + +L D+ +++ I S G+D T+
Sbjct: 371 KENLFISASFDKTVKMWDVRSNKTPLY--DLVGHSDRILCCDWSVNEL--IVSGGVDCTM 426
Query: 200 KIWSMK 205
K + K
Sbjct: 427 KTYRRK 432
>FB|FBgn0025725 [details] [associations]
symbol:alphaCop "alpha-coatomer protein" species:7227
"Drosophila melanogaster" [GO:0006890 "retrograde vesicle-mediated
transport, Golgi to ER" evidence=ISS;NAS] [GO:0030126 "COPI vesicle
coat" evidence=ISS;NAS] [GO:0016192 "vesicle-mediated transport"
evidence=NAS] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006911 "phagocytosis, engulfment" evidence=IMP]
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
[GO:0010883 "regulation of lipid storage" evidence=IDA] [GO:0000902
"cell morphogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0006911 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000902 GO:GO:0030126 GO:GO:0010883
InterPro:IPR016391 PIRSF:PIRSF003354 EMBL:AJ011114
ProteinModelPortal:O77285 SMR:O77285 STRING:O77285 PaxDb:O77285
PRIDE:O77285 FlyBase:FBgn0025725 InParanoid:O77285
OrthoDB:EOG4CFXQ2 ChiTaRS:alphaCop ArrayExpress:O77285 Bgee:O77285
Uniprot:O77285
Length = 1234
Score = 144 (55.7 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 31/107 (28%), Positives = 58/107 (54%)
Query: 98 IPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWN 157
+P V+GG + I+V + + + + H D + + P ++SAS D+++R+WN
Sbjct: 63 MPLFVSGGDDYKIKVWNYKQRRCIFTLLAHLDYVRTVAFHHEYP-WILSASDDQTIRIWN 121
Query: 158 VQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
Q+ CI + G H + V+ FHP++ +I S +D TV++W +
Sbjct: 122 WQSRNCICVLTG---HNHYVMCAQFHPTED-QIVSASLDQTVRVWDI 164
Score = 37 (18.1 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 7/16 (43%), Positives = 9/16 (56%)
Query: 251 DFILSKSVDNEIVLWE 266
D ILS D I +W+
Sbjct: 265 DLILSNGEDRSIRVWD 280
>ZFIN|ZDB-GENE-051120-180 [details] [associations]
symbol:taf5 "TAF5 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 ZFIN:ZDB-GENE-051120-180 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 HOVERGEN:HBG050226 OMA:ERQNNQI
OrthoDB:EOG469QW7 HOGENOM:HOG000212424 EMBL:CR812943
IPI:IPI00656497 UniGene:Dr.78627 ProteinModelPortal:B8JIQ0
Ensembl:ENSDART00000015007 ArrayExpress:B8JIQ0 Bgee:B8JIQ0
Uniprot:B8JIQ0
Length = 756
Score = 129 (50.5 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 37/126 (29%), Positives = 59/126 (46%)
Query: 100 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 159
+ V+GG + + R+ + + + F GH + R P + V + S D +VRLW+V
Sbjct: 555 YFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHP-NSNYVATGSSDRTVRLWDVL 613
Query: 160 TGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVE-KSFTWT 218
G C+ IF G H+ + S+ F P+ + +AS D V +W + E K T T
Sbjct: 614 NGNCVRIFTG---HKGPIHSLAFSPNGKF-LASGSTDGRVLLWDIGHGLMIAELKGHTGT 669
Query: 219 DLPSKF 224
KF
Sbjct: 670 IYALKF 675
Score = 112 (44.5 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 25/97 (25%), Positives = 47/97 (48%)
Query: 111 RVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGA 170
R++D K GH + + P + + ++S+S+D ++RLW++QT C++ G
Sbjct: 482 RIMDEKTSSESKILHGHSGPVYGVSFSPDR-NYLLSSSEDGTIRLWSLQTFTCLV---GY 537
Query: 171 GGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEF 207
GH V F P Y ++ G D ++W+ +
Sbjct: 538 KGHNYPVWDTQFSPFGYYFVSG-GHDRVARLWATDHY 573
Score = 65 (27.9 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 20/67 (29%), Positives = 31/67 (46%)
Query: 301 FHYNA--AAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCED 358
FH N+ A G+ + + +W++ + V I H K PI A S +G + S D
Sbjct: 591 FHPNSNYVATGSSDRTVRLWDVLNGNCVRIFT-GH---KGPIHSLAFSPNGKFLASGSTD 646
Query: 359 GAIWRWD 365
G + WD
Sbjct: 647 GRVLLWD 653
Score = 48 (22.0 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 250 GDFILSKSVDNEIVLWE 266
G+ I S S+DN + LW+
Sbjct: 679 GEIIASGSIDNTVRLWD 695
>ZFIN|ZDB-GENE-090313-79 [details] [associations]
symbol:fbxw7 "F-box and WD repeat domain containing
7" species:7955 "Danio rerio" [GO:0045746 "negative regulation of
Notch signaling pathway" evidence=IMP] [GO:0001525 "angiogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
ZFIN:ZDB-GENE-090313-79 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0001525 SUPFAM:SSF81383 GO:GO:0045746
GeneTree:ENSGT00690000101849 EMBL:AL953881 IPI:IPI00499035
Ensembl:ENSDART00000086512 Bgee:F1RCB5 Uniprot:F1RCB5
Length = 760
Score = 138 (53.6 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 34/115 (29%), Positives = 62/115 (53%)
Query: 91 WACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKD 150
++ DGI +V+G ++ IRV DV + GH S+ LK +++VS + D
Sbjct: 598 YSLQFDGI-HVVSGSLDTSIRVWDVETGNCIHTLTGH-QSLTS--GMELKDNILVSGNAD 653
Query: 151 ESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
+V++W+++TG C+ G H++ V + F+ + + I S D TVK+W ++
Sbjct: 654 STVKIWDIKTGQCLQTLQGPHKHQSAVTCLQFNKNFV--ITSSD-DGTVKLWDLR 705
Score = 112 (44.5 bits), Expect = 3.2e-05, Sum P(4) = 3.2e-05
Identities = 25/105 (23%), Positives = 53/105 (50%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
+V+G + ++V K ++ VGH + + ++ ++++S S D ++++WN +T
Sbjct: 447 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV---WSSQMRDNIIISGSTDRTLKVWNAET 503
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
G CI G H + V + H R+ S D T+++W ++
Sbjct: 504 GECIHTLYG---HTSTVRCMHLHEK---RVVSGSRDATLRVWDIE 542
Score = 106 (42.4 bits), Expect = 0.00014, Sum P(4) = 0.00014
Identities = 32/114 (28%), Positives = 58/114 (50%)
Query: 91 WACNV-DGIPFLVAGGINGIIRVIDV-SNEKLHKSFVGHGDSINEIRTQPLKPSLVVSAS 148
W+ + D I +++G + ++V + + E +H + GH ++ R L VVS S
Sbjct: 478 WSSQMRDNI--IISGSTDRTLKVWNAETGECIHTLY-GHTSTV---RCMHLHEKRVVSGS 531
Query: 149 KDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIW 202
+D ++R+W+++TG C+ + G H V V + D R+ S D VK+W
Sbjct: 532 RDATLRVWDIETGQCLHVLMG---HVAAVRCVQY---DGRRVVSGAYDFMVKVW 579
Score = 59 (25.8 bits), Expect = 3.2e-05, Sum P(4) = 3.2e-05
Identities = 11/62 (17%), Positives = 32/62 (51%)
Query: 304 NAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWR 363
N GN + + +W++++ + + H + +S + T + ++ + +++ +DG +
Sbjct: 645 NILVSGNADSTVKIWDIKTGQCLQTLQGPH-KHQSAV--TCLQFNKNFVITSSDDGTVKL 701
Query: 364 WD 365
WD
Sbjct: 702 WD 703
Score = 51 (23.0 bits), Expect = 0.00086, Sum P(3) = 0.00086
Identities = 9/33 (27%), Positives = 19/33 (57%)
Query: 239 HSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKE 271
H + V C ++ +F+++ S D + LW+ + E
Sbjct: 676 HQSAVTCLQFNKNFVITSSDDGTVKLWDLRTGE 708
Score = 42 (19.8 bits), Expect = 3.2e-05, Sum P(4) = 3.2e-05
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 239 HSNYVDCNRWLGDFILSKSVDNEIVLWE 266
H+N V ++ G ++S S+D I +W+
Sbjct: 593 HTNRVYSLQFDGIHVVSGSLDTSIRVWD 620
Score = 40 (19.1 bits), Expect = 5.0e-05, Sum P(4) = 5.0e-05
Identities = 8/30 (26%), Positives = 17/30 (56%)
Query: 239 HSNYVDCNRWLGDFILSKSVDNEIVLWEPK 268
H V C ++ G ++S + D + +W+P+
Sbjct: 553 HVAAVRCVQYDGRRVVSGAYDFMVKVWDPE 582
Score = 38 (18.4 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 67 EGGVIAALQSYVDEDKEE 84
EG V A L+S D+D+ E
Sbjct: 140 EGQVGAGLRSEEDDDRPE 157
>ASPGD|ASPL0000002074 [details] [associations]
symbol:rcoA species:162425 "Emericella nidulans"
[GO:0070791 "cleistothecium development" evidence=IMP] [GO:0043941
"positive regulation of sexual sporulation resulting in formation
of a cellular spore" evidence=IMP] [GO:0045461 "sterigmatocystin
biosynthetic process" evidence=IMP] [GO:0016584 "nucleosome
positioning" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0080025 "phosphatidylinositol-3,5-bisphosphate
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0010914 "positive
regulation of sterigmatocystin biosynthetic process" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:0000433 "negative regulation of transcription
from RNA polymerase II promoter by glucose" evidence=IEA]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043156 "chromatin
remodeling in response to cation stress" evidence=IEA] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0001198 "negative regulation
of mating-type specific transcription from RNA polymerase II
promoter" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 HOGENOM:HOG000200558
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
ProteinModelPortal:C8V0I4 EnsemblFungi:CADANIAT00007274 OMA:SQYIVNP
Uniprot:C8V0I4
Length = 574
Score = 131 (51.2 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 45/186 (24%), Positives = 84/186 (45%)
Query: 83 EESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPS 142
E+ Y++ +A N G ++ +G + +R+ D++ KL + + D + + P
Sbjct: 358 EQDIYSLDFAGN--G-RYIASGSGDKTVRLWDIAEGKLVYT-LSIEDGVTTVAMSP--DG 411
Query: 143 LVVSA-SKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKI 201
L V+A S D++VR+W+ TG + GH++ V SV F P+ + S +D T+K+
Sbjct: 412 LYVAAGSLDKTVRVWDTTTGYLVERLENPDGHKDSVYSVAFAPNG-KELVSGSLDKTIKL 470
Query: 202 WSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWLGDFILSKSVDNE 261
W + + + K + F+ SV C G +++S S D
Sbjct: 471 WELN----LPRQQYNSAGKGGKCHRTFEGHKDFVLSV------CLTPDGHWVMSGSKDRG 520
Query: 262 IVLWEP 267
+ W+P
Sbjct: 521 VQFWDP 526
>UNIPROTKB|F1RKG5 [details] [associations]
symbol:WSB2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0035556 "intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 OMA:HHPQVPD EMBL:CU468330
Ensembl:ENSSSCT00000010800 Uniprot:F1RKG5
Length = 404
Score = 119 (46.9 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 35/129 (27%), Positives = 65/129 (50%)
Query: 91 WACNVDGIP----FLVAGGIN-GIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVV 145
WA + +P ++A G+N G I++ +V L + GH D + ++ P ++V
Sbjct: 111 WARHHPQVPDVSCLILATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILV 170
Query: 146 SASKDESVRLWNVQT-GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
SAS+D+++R+W++ G I + +G H V P D + S + +V +WSM
Sbjct: 171 SASRDKTLRIWDLNKHGKQIQVLSG---HLQWVYCCSISP-DCSMLCSAAGEKSVFLWSM 226
Query: 205 KEFWTYVEK 213
+ + T + K
Sbjct: 227 RSY-TLIRK 234
Score = 51 (23.0 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 27/134 (20%), Positives = 56/134 (41%)
Query: 240 SNYVDCNRWLGD--FILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWF--- 294
S+ V C+ + D +++ S D +++W+P E+ + P+ + D+
Sbjct: 240 SSVVSCD-FSPDSALLVTASYDTNVIMWDPYTGERLRSLHHTQLSP--PMDDSDVHISSL 296
Query: 295 --IKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTI 352
+ FS + Y A +R + +W L+ P+ A +++ + T + G I
Sbjct: 297 RSVCFSPEGLYLATVADDR--LLRIWALELKTPIAFAPMTNG-----LCCTFFPH-GGVI 348
Query: 353 LSCCEDGAIWRWDA 366
+ DG + W A
Sbjct: 349 ATGTRDGHVQFWTA 362
>UNIPROTKB|Q0V8J1 [details] [associations]
symbol:WSB2 "WD repeat and SOCS box-containing protein 2"
species:9913 "Bos taurus" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567
GO:GO:0005622 GeneTree:ENSGT00700000104017 HOGENOM:HOG000063727
HOVERGEN:HBG034543 EMBL:BT026227 IPI:IPI00708559
RefSeq:NP_001068825.1 UniGene:Bt.109198 ProteinModelPortal:Q0V8J1
Ensembl:ENSBTAT00000009395 GeneID:508388 KEGG:bta:508388 CTD:55884
InParanoid:Q0V8J1 KO:K10342 OMA:HHPQVPD OrthoDB:EOG45DWPC
NextBio:20868498 Uniprot:Q0V8J1
Length = 406
Score = 119 (46.9 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 35/129 (27%), Positives = 65/129 (50%)
Query: 91 WACNVDGIP----FLVAGGIN-GIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVV 145
WA + +P ++A G+N G I++ +V L + GH D + ++ P ++V
Sbjct: 113 WARHHPQVPDVSCLILATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILV 172
Query: 146 SASKDESVRLWNVQT-GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
SAS+D+++R+W++ G I + +G H V P D + S + +V +WSM
Sbjct: 173 SASRDKTLRIWDLNKHGKQIQVLSG---HLQWVYCCSISP-DCSMLCSAAGEKSVFLWSM 228
Query: 205 KEFWTYVEK 213
+ + T + K
Sbjct: 229 RSY-TLIRK 236
Score = 51 (23.0 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 27/134 (20%), Positives = 56/134 (41%)
Query: 240 SNYVDCNRWLGD--FILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWF--- 294
S+ V C+ + D +++ S D +++W+P E+ + P+ + D+
Sbjct: 242 SSVVSCD-FSPDSALLVTASYDTNVIMWDPYTGERLRSLHHTQL--NPPMDDSDVHISSL 298
Query: 295 --IKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTI 352
+ FS + Y A +R + +W L+ P+ A +++ + T + G I
Sbjct: 299 RSVCFSPEGLYLATVADDR--LLRIWALELKTPIAFAPMTNG-----LCCTFFPH-GGVI 350
Query: 353 LSCCEDGAIWRWDA 366
+ DG + W A
Sbjct: 351 ATGTRDGHVQFWTA 364
>CGD|CAL0005992 [details] [associations]
symbol:orf19.3581 species:5476 "Candida albicans" [GO:0042393
"histone binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0006335
"DNA replication-dependent nucleosome assembly" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0005992 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 EMBL:AACQ01000094
EMBL:AACQ01000093 InterPro:IPR022052 Pfam:PF12265
HOGENOM:HOG000160330 RefSeq:XP_714940.1 RefSeq:XP_715003.1
ProteinModelPortal:Q59ZD9 STRING:Q59ZD9 GeneID:3643390
GeneID:3643420 KEGG:cal:CaO19.11065 KEGG:cal:CaO19.3581
Uniprot:Q59ZD9
Length = 435
Score = 129 (50.5 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 33/114 (28%), Positives = 56/114 (49%)
Query: 90 SWACNVDGIPFLVAGGINGIIRVIDVSN-EKLHKSFVGHGDSINEIRTQPLKPSLVVSAS 148
S ACN L G NG+I++ D+ N + GH DS+ +++ P +++ S+S
Sbjct: 314 SVACNPGYATGLATGDSNGVIKMWDIRNFDNSLSELHGHSDSVTQLKWNPKCHNILGSSS 373
Query: 149 KDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIW 202
D SV+L ++ I G H V D+ +D + +AS DN++ +W
Sbjct: 374 SDHSVKLHDMSNDSTIFTHLG---HMLGVNDFDWSYADPWMVASVADDNSLHVW 424
>DICTYBASE|DDB_G0282623 [details] [associations]
symbol:wdr3 "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0282623 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR007148
Pfam:PF04003 KO:K14556 OMA:SIFAHDD HSSP:Q02793 RefSeq:XP_640160.1
ProteinModelPortal:Q54S79 STRING:Q54S79 EnsemblProtists:DDB0233973
GeneID:8623698 KEGG:ddi:DDB_G0282623 ProtClustDB:CLSZ2430470
Uniprot:Q54S79
Length = 942
Score = 133 (51.9 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 31/102 (30%), Positives = 50/102 (49%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
LV+G + + V D+ E GH D I ++ L+ S SKD +++W+ +T
Sbjct: 116 LVSGSKDTEVIVWDIITESGLFRLRGHRDQITSVKLLERSNHLITS-SKDGFIKIWDTET 174
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIW 202
CI G HRN + +D +P + R+ SC DN ++ W
Sbjct: 175 QHCIQTIVG---HRNPIWGIDVNPDET-RLCSCTSDNQIRFW 212
Score = 117 (46.2 bits), Expect = 0.00089, Sum P(2) = 0.00089
Identities = 42/146 (28%), Positives = 70/146 (47%)
Query: 57 GNRVTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVS 116
G R++++ L V+ QS +ED + V + DG L +G +G IR+ +S
Sbjct: 36 GERISIWD-LRKQVLN--QSLYEEDIKAEVTNV--CLSKDGA-LLASGYSDGSIRIWSMS 89
Query: 117 NEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNE 176
+ +L F GH S+ + L +++VS SKD V +W++ T + G HR++
Sbjct: 90 DYQLQAVFNGHRGSVTTMTFNRLG-NILVSGSKDTEVIVWDIITESGLFRLRG---HRDQ 145
Query: 177 VLSVDFHPSDIYRIASCGMDNTVKIW 202
+ SV + I S D +KIW
Sbjct: 146 ITSVKLLERSNHLITS-SKDGFIKIW 170
Score = 47 (21.6 bits), Expect = 0.00089, Sum P(2) = 0.00089
Identities = 15/66 (22%), Positives = 31/66 (46%)
Query: 304 NAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWR 363
N +++G I +W+ ++ + + H ++PI ++ D + + SC D I
Sbjct: 156 NHLITSSKDGFIKIWDTETQHCIQTI-VGH---RNPIWGIDVNPDETRLCSCTSDNQIRF 211
Query: 364 WDAIPT 369
W IP+
Sbjct: 212 W-RIPS 216
Score = 45 (20.9 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 26/115 (22%), Positives = 47/115 (40%)
Query: 253 ILSKSVDNEIVLWEPKM---KEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIG 309
+ S D + W+ ++ +E S + L K E D+ +K+S D + A ++
Sbjct: 492 VTSGGADKLVKFWDFELIASQENSKHKVLNLSLTKTLKVESDVLALKYSADNKFLAVSLL 551
Query: 310 NREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRW 364
+ KIF + + LS K P+ +S D + I++ D I W
Sbjct: 552 DNTVKIFYTD------TVKFHLSLYGHKLPVMCLDISDDSTLIITGSADKNIKIW 600
>ASPGD|ASPL0000014385 [details] [associations]
symbol:cpcB species:162425 "Emericella nidulans"
[GO:0034198 "cellular response to amino acid starvation"
evidence=IMP] [GO:0001965 "G-protein alpha-subunit binding"
evidence=IGI;ISS] [GO:0070798 "positive regulation of
cleistothecium development" evidence=IMP] [GO:0005622
"intracellular" evidence=IDA] [GO:0035690 "cellular response to
drug" evidence=IEP] [GO:0097308 "cellular response to farnesol"
evidence=IEP] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0005080 "protein kinase C binding" evidence=IEA] [GO:0070791
"cleistothecium development" evidence=IMP] [GO:0032995 "regulation
of fungal-type cell wall biogenesis" evidence=IEA] [GO:0031139
"positive regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0034613 "cellular protein localization"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0032956 "regulation of actin cytoskeleton
organization" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001302
EMBL:AACD01000067 HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
RefSeq:XP_661767.1 ProteinModelPortal:G5EB28 SMR:G5EB28
EnsemblFungi:CADANIAT00004509 GeneID:2873584 KEGG:ani:AN4163.2
Uniprot:G5EB28
Length = 316
Score = 116 (45.9 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 36/119 (30%), Positives = 59/119 (49%)
Query: 122 KSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVD 181
+S GH +++ + +SAS D+S+RLW + +G F G H N+VLSV
Sbjct: 57 RSLEGHSHIVSDCVISS-DGAYALSASWDKSLRLWELSSGQTTRTFVG---HTNDVLSVS 112
Query: 182 FHPSDIYRIASCGMDNTVKIWS-MKEF-WTYVEKSFT-WTDLPSKFPTKYVQFPVFIAS 237
F +D +I S D T+K+W+ + + +T +K T W P Q PV +++
Sbjct: 113 FS-ADNRQIVSGSRDRTIKLWNTLGDCKYTITDKGHTEWVSCVRFSPNP--QNPVIVSA 168
Score = 107 (42.7 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 28/96 (29%), Positives = 47/96 (48%)
Query: 110 IRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAG 169
+R+ ++S+ + ++FVGH + + + +VS S+D +++LWN G C
Sbjct: 87 LRLWELSSGQTTRTFVGHTNDVLSVSFSADNRQ-IVSGSRDRTIKLWNT-LGDCKYTITD 144
Query: 170 AGGHRNEVLSVDFHPSDIYR-IASCGMDNTVKIWSM 204
G H V V F P+ I S G D VK+W +
Sbjct: 145 KG-HTEWVSCVRFSPNPQNPVIVSAGWDKLVKVWEL 179
Score = 50 (22.7 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 16/49 (32%), Positives = 19/49 (38%)
Query: 317 VWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWD 365
VWEL S + H I +S DGS S +DG WD
Sbjct: 176 VWELASCR----LQTDHIGHTGYINTVTISPDGSLCASGGKDGVTMLWD 220
Score = 37 (18.1 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 6/17 (35%), Positives = 10/17 (58%)
Query: 307 AIGNREGKIFVWELQSS 323
A G ++G +W+L S
Sbjct: 208 ASGGKDGVTMLWDLNES 224
>UNIPROTKB|O75529 [details] [associations]
symbol:TAF5L "TAF5-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 5L"
species:9606 "Homo sapiens" [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0030914 "STAGA complex" evidence=IDA]
[GO:0043966 "histone H3 acetylation" evidence=IDA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AJ009770
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 EMBL:AL121990 EMBL:CH471098 GO:GO:0003713
GO:GO:0006366 GO:GO:0043966 GO:GO:0030914 GO:GO:0033276
EMBL:AF069736 EMBL:BC041094 IPI:IPI00004325 IPI:IPI00410088
RefSeq:NP_001020418.1 RefSeq:NP_055224.1 UniGene:Hs.270621
ProteinModelPortal:O75529 SMR:O75529 DIP:DIP-28147N IntAct:O75529
STRING:O75529 PhosphoSite:O75529 PaxDb:O75529 PRIDE:O75529
DNASU:27097 Ensembl:ENST00000258281 Ensembl:ENST00000366675
Ensembl:ENST00000366676 GeneID:27097 KEGG:hsa:27097 UCSC:uc001htq.3
UCSC:uc001htr.3 CTD:27097 GeneCards:GC01M229728 HGNC:HGNC:17304
neXtProt:NX_O75529 PharmGKB:PA38223 HOGENOM:HOG000212423
HOVERGEN:HBG050226 InParanoid:O75529 KO:K03130 OMA:YVDSEGP
OrthoDB:EOG4NCMCF PhylomeDB:O75529 ChiTaRS:TAF5L GenomeRNAi:27097
NextBio:49741 ArrayExpress:O75529 Bgee:O75529 CleanEx:HS_TAF5L
Genevestigator:O75529 GermOnline:ENSG00000135801 Uniprot:O75529
Length = 589
Score = 130 (50.8 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 29/89 (32%), Positives = 48/89 (53%)
Query: 124 FVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFH 183
+ GH ++ ++ P + + + S D++VRLW+ Q G + +F G HR VLS+ F
Sbjct: 422 YAGHLADVDCVKFHP-NSNYLATGSTDKTVRLWSAQQGNSVRLFTG---HRGPVLSLAFS 477
Query: 184 PSDIYRIASCGMDNTVKIWSMKEFWTYVE 212
P+ Y +AS G D +K+W + Y E
Sbjct: 478 PNGKY-LASAGEDQRLKLWDLASGTLYKE 505
Score = 123 (48.4 bits), Expect = 0.00017, P = 0.00017
Identities = 29/111 (26%), Positives = 54/111 (48%)
Query: 100 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 159
+L G + +R+ + F GH + + P + SA +D+ ++LW++
Sbjct: 440 YLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSP-NGKYLASAGEDQRLKLWDLA 498
Query: 160 TGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTY 210
+G ++ GH + + S+ F P D IAS MDN+V++W ++ TY
Sbjct: 499 SGT---LYKELRGHTDNITSLTFSP-DSGLIASASMDNSVRVWDIRN--TY 543
Score = 43 (20.2 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 12/51 (23%), Positives = 29/51 (56%)
Query: 253 ILSKSVDNEIVLWEPKMKEQS-PGEGTA-DILQKYPVPECDIWFIKF-SCD 300
I S S+DN + +W+ + S P +G++ +++ Y ++ ++F +C+
Sbjct: 525 IASASMDNSVRVWDIRNTYCSAPADGSSSELVGVYTGQMSNVLSVQFMACN 575
>UNIPROTKB|G4MQX3 [details] [associations]
symbol:MGG_04719 "Guanine nucleotide-binding protein
subunit beta-like protein" species:242507 "Magnaporthe oryzae
70-15" [GO:0005575 "cellular_component" evidence=ND] [GO:0043581
"mycelium development" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001231 GO:GO:0043581 KO:K14753
RefSeq:XP_003710816.1 ProteinModelPortal:G4MQX3 SMR:G4MQX3
EnsemblFungi:MGG_04719T0 GeneID:2677887 KEGG:mgr:MGG_04719
Uniprot:G4MQX3
Length = 316
Score = 114 (45.2 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 36/119 (30%), Positives = 59/119 (49%)
Query: 122 KSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVD 181
+S GH +++ + +SAS D+++RLW + TG F G H N+VLSV
Sbjct: 57 RSLKGHSHIVSDCVISS-DGAYALSASWDKTLRLWELATGTTTRRFVG---HTNDVLSVS 112
Query: 182 FHPSDIYRIASCGMDNTVKIWS-MKEF-WTYVEKSFT-WTDLPSKFPTKYVQFPVFIAS 237
F +D +I S D ++K+W+ + + +T EK + W P Q PV ++S
Sbjct: 113 FS-ADNRQIVSGSRDRSIKLWNTLGDCKYTITEKGHSEWVSCVRFSPNP--QNPVIVSS 168
Score = 101 (40.6 bits), Expect = 0.00083, Sum P(2) = 0.00083
Identities = 30/110 (27%), Positives = 50/110 (45%)
Query: 96 DGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRL 155
DG + ++ + +R+ +++ + FVGH + + + +VS S+D S++L
Sbjct: 74 DGA-YALSASWDKTLRLWELATGTTTRRFVGHTNDVLSVSFSADNRQ-IVSGSRDRSIKL 131
Query: 156 WNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYR-IASCGMDNTVKIWSM 204
WN G C G H V V F P+ I S G D VK+W +
Sbjct: 132 WNT-LGDCKYTITEKG-HSEWVSCVRFSPNPQNPVIVSSGWDKLVKVWEL 179
Score = 52 (23.4 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 16/49 (32%), Positives = 19/49 (38%)
Query: 317 VWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWD 365
VWEL S + H I +S DGS S +DG WD
Sbjct: 176 VWELSSCK----LQTDHIGHTGYINTVTISPDGSLCASGGKDGTTMLWD 220
>ASPGD|ASPL0000005389 [details] [associations]
symbol:sconB species:162425 "Emericella nidulans"
[GO:0043224 "nuclear SCF ubiquitin ligase complex" evidence=IEA]
[GO:0043130 "ubiquitin binding" evidence=IEA] [GO:0030674 "protein
binding, bridging" evidence=IEA] [GO:0030174 "regulation of
DNA-dependent DNA replication initiation" evidence=IEA] [GO:0000087
"M phase of mitotic cell cycle" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0000114 "regulation of transcription involved in G1 phase of
mitotic cell cycle" evidence=IEA] [GO:0046686 "response to cadmium
ion" evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0046685 "response to arsenic-containing
substance" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 UniPathway:UPA00143 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 SUPFAM:SSF81383
GO:GO:0016567 EMBL:AACD01000107 EMBL:BN001301 HOGENOM:HOG000166480
KO:K10259 OMA:ILCYLDT OrthoDB:EOG496313 EMBL:U21220
RefSeq:XP_663963.1 ProteinModelPortal:Q00659 STRING:Q00659
EnsemblFungi:CADANIAT00006625 GeneID:2871261 KEGG:ani:AN6359.2
Uniprot:Q00659
Length = 678
Score = 131 (51.2 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 34/120 (28%), Positives = 60/120 (50%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
L G + I++ D + ++ GH I ++ K ++S S D ++++WN +T
Sbjct: 362 LATGSYDTTIKIWDTETGEELRTLRGHESGIRCLQFDDTK---LISGSMDRTIKVWNWRT 418
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFT-WTD 219
G CI + G HR V+ + F D +AS +D TVKIW+ ++ T+ + T W +
Sbjct: 419 GECISTYTG---HRGGVIGLHF---DASILASGSVDKTVKIWNFEDKSTFSLRGHTDWVN 472
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 116 (45.9 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 33/114 (28%), Positives = 52/114 (45%)
Query: 92 ACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDE 151
A + DG L A +G + V + +L GH + P L+ S+S D
Sbjct: 33 AFSPDGRTLLTASD-DGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSP-DGRLIASSSSDH 90
Query: 152 SVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
S+RLW+V C+ + G H+ V +V F P D ++AS G D +W ++
Sbjct: 91 SIRLWDVARSKCLHVLKG---HQRSVETVSFSP-DSKQLASGGWDKRAIVWEVQ 140
Score = 49 (22.3 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 10/32 (31%), Positives = 20/32 (62%)
Query: 298 SCDFH--YNAAAIGNREGKIFVWELQSSPPVL 327
S DF ++ A G+ + + +W+L++S PV+
Sbjct: 157 SSDFSPTSDSLATGSWDSTVHIWDLRASTPVV 188
>TAIR|locus:2089855 [details] [associations]
symbol:AT3G21540 "AT3G21540" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0001510 "RNA methylation" evidence=RCA]
[GO:0006406 "mRNA export from nucleus" evidence=RCA] [GO:0006606
"protein import into nucleus" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686 GO:GO:0005730
EMBL:AB019232 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
InterPro:IPR007148 Pfam:PF04003 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD IPI:IPI00523426 RefSeq:NP_188791.3 UniGene:At.28071
ProteinModelPortal:Q9LVF2 SMR:Q9LVF2 STRING:Q9LVF2 PRIDE:Q9LVF2
EnsemblPlants:AT3G21540.1 GeneID:821708 KEGG:ath:AT3G21540
TAIR:At3g21540 InParanoid:Q9LVF2 PhylomeDB:Q9LVF2
ProtClustDB:CLSN2680855 ArrayExpress:Q9LVF2 Genevestigator:Q9LVF2
Uniprot:Q9LVF2
Length = 955
Score = 115 (45.5 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 32/107 (29%), Positives = 57/107 (53%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
L +G + I + DV E GH D + ++ LV S+SKD+ +R+W+++T
Sbjct: 121 LASGSKDNDIILWDVVGESGLFRLRGHRDQVTDLVFLDGGKKLV-SSSKDKFLRVWDLET 179
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEF 207
C+ I +G H +EV SVD P + Y + + D ++ +++KE+
Sbjct: 180 QHCMQIVSG---HHSEVWSVDTDPEERY-VVTGSADQELRFYAVKEY 222
Score = 64 (27.6 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 27/111 (24%), Positives = 50/111 (45%)
Query: 257 SVDNEIVLWEPKMKEQSPGEGTADILQ---KYPVPECDIWFIKFSCDFHYNAAAIGNREG 313
S D+E+ WE ++K++S G+ T + K D+ + S D + A A+ +
Sbjct: 506 SADHEVKFWEYQVKQKS-GKATKKLTVSNVKSMKMNDDVLAVAISPDAKHIAVALLDSTV 564
Query: 314 KIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRW 364
K+F + S ++ H K P+ +S DG I++ +D + W
Sbjct: 565 KVFYMD---SLKFYLSLYGH---KLPVMCIDISSDGELIVTGSQDKNLKIW 609
>POMBASE|SPAC23C4.02 [details] [associations]
symbol:crn1 "actin binding protein, coronin Crn1"
species:4896 "Schizosaccharomyces pombe" [GO:0003779 "actin
binding" evidence=ISS] [GO:0005826 "actomyosin contractile ring"
evidence=IDA] [GO:0030036 "actin cytoskeleton organization"
evidence=ISS] [GO:0030041 "actin filament polymerization"
evidence=NAS] [GO:0030139 "endocytic vesicle" evidence=IDA]
[GO:0030479 "actin cortical patch" evidence=IDA] [GO:0035838
"growing cell tip" evidence=IDA] [GO:0043234 "protein complex"
evidence=NAS] [GO:0051015 "actin filament binding" evidence=IEA]
[GO:0051017 "actin filament bundle assembly" evidence=NAS]
[GO:0051286 "cell tip" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPAC23C4.02 GO:GO:0003779
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030479 GO:GO:0051017 GO:GO:0030041 GO:GO:0030139
GO:GO:0005826 GO:GO:0035838 HOGENOM:HOG000166356 InterPro:IPR015505
InterPro:IPR015048 InterPro:IPR015049 PANTHER:PTHR10856
Pfam:PF08953 Pfam:PF08954 PIR:T38258 RefSeq:NP_593175.1
ProteinModelPortal:O13923 STRING:O13923 PRIDE:O13923
EnsemblFungi:SPAC23C4.02.1 GeneID:2541961 KEGG:spo:SPAC23C4.02
OMA:LQDRRIA OrthoDB:EOG4TJ02B NextBio:20803045 Uniprot:O13923
Length = 601
Score = 104 (41.7 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 32/133 (24%), Positives = 57/133 (42%)
Query: 90 SWACNVDGI-PFLVA----GGINGIIRVIDVSNE-KLHKS---FVGHGDSINEIRTQPLK 140
+W N+ + PF ++ G G + VI ++ KL F GH ++ + P
Sbjct: 34 AWDSNLLSVNPFYLSVNWNAGAGGALAVIPLNERGKLPDQVNLFRGHTAAVLDTDWNPFH 93
Query: 141 PSLVVSASKDESVRLWNVQTGICILI-------FAGAGGHRNEVLSVDFHPSDIYRIASC 193
++ S D + +W V ++ A GH +V V +HP+ +AS
Sbjct: 94 DQVLASGGDDSKIMIWKVPEDYTVMEPYEDVHPIAELKGHSRKVGLVQYHPTAANVLASS 153
Query: 194 GMDNTVKIWSMKE 206
DNT+K+W ++
Sbjct: 154 SADNTIKLWDCEK 166
Score = 71 (30.1 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 34/119 (28%), Positives = 51/119 (42%)
Query: 253 ILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNRE 312
+ S S DN I LW+ + +G A + K V C + F+ D +R+
Sbjct: 150 LASSSADNTIKLWDCE-------KGVAHVSLKMDVM-CQS--MSFNADG--TRLVTTSRD 197
Query: 313 GKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYD--GSTILSCCEDGAIWRWDAIPT 369
K+ VW+ ++ PV + HA +K+P S D +T S D I WD PT
Sbjct: 198 KKVRVWDPRTDKPVSVGN-GHAGAKNPRVVWLGSLDRFATTGFSKMSDRQIALWD--PT 253
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 127 (49.8 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 36/105 (34%), Positives = 50/105 (47%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
LV + ++V V +K S H + + R P L+ S D +VRLW+ +
Sbjct: 117 LVTASDDKSVKVWGVERKKFLYSLNRHTNWVRCARFSP-DGRLIASCGDDRTVRLWDTSS 175
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
CI IF GG VDF+ S IAS G DNT+KIW ++
Sbjct: 176 HQCINIFTDYGG---SATFVDFNSSGTC-IASSGADNTIKIWDIR 216
Score = 111 (44.1 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 32/96 (33%), Positives = 46/96 (47%)
Query: 124 FVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFH 183
FVGH D I + P SLV S+S+D++VRLW +F H V SV F
Sbjct: 56 FVGHTDVITGVNFAP-SGSLVASSSRDQTVRLWTPSIKGESTVFKA---HTASVRSVHFS 111
Query: 184 PSDIYRIASCGMDNTVKIWSM--KEFWTYVEKSFTW 217
D R+ + D +VK+W + K+F + + W
Sbjct: 112 -RDGQRLVTASDDKSVKVWGVERKKFLYSLNRHTNW 146
Score = 61 (26.5 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 31/125 (24%), Positives = 47/125 (37%)
Query: 240 SNYVDCNRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSC 299
+ +VD N G I S DN I +W+ + T ++Q Y V + F
Sbjct: 189 ATFVDFNS-SGTCIASSGADNTIKIWDIR---------TNKLIQHYKVHNAGVNCFSFHP 238
Query: 300 DFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDG 359
+Y + G+ + I + +L LI L H K P+ S DG S D
Sbjct: 239 SGNYLIS--GSSDSTIKILDLLEGR--LIYTL-HGH-KGPVLTVTFSRDGDLFASGGADS 292
Query: 360 AIWRW 364
+ W
Sbjct: 293 QVLMW 297
Score = 46 (21.3 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 239 HSNYVDCNRWLGD--FILSKSVDNEIVLWE 266
H+N+V C R+ D I S D + LW+
Sbjct: 143 HTNWVRCARFSPDGRLIASCGDDRTVRLWD 172
Score = 40 (19.1 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 5/17 (29%), Positives = 11/17 (64%)
Query: 250 GDFILSKSVDNEIVLWE 266
GD S D+++++W+
Sbjct: 282 GDLFASGGADSQVLMWK 298
>UNIPROTKB|F1SQT5 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043531 "ADP binding" evidence=IEA] [GO:0042981
"regulation of apoptotic process" evidence=IEA] [GO:0006952
"defense response" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
CTD:317 KO:K02084 OMA:KVCKNSA InterPro:IPR017251 PIRSF:PIRSF037646
GeneTree:ENSGT00700000104017 EMBL:FP102239 EMBL:CU633605
RefSeq:XP_003481790.1 Ensembl:ENSSSCT00000000968
Ensembl:ENSSSCT00000033603 GeneID:100513283 KEGG:ssc:100513283
Uniprot:F1SQT5
Length = 1249
Score = 102 (41.0 bits), Expect = 3.0e-05, Sum P(3) = 3.0e-05
Identities = 40/175 (22%), Positives = 78/175 (44%)
Query: 34 RPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWA 92
RP V++ S A+ G ++ + V++ G + ++++ DE + A
Sbjct: 612 RPHTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDE-------VLCCA 664
Query: 93 CNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIR-TQPLKPSLVVSASKDE 151
+ D F+ ++ +++ + +L +S+ H + +N T L+ + S D
Sbjct: 665 FSADD-RFIATCSVDKKVKIWNSVTGELVQSYDEHSEQVNCCHFTNNSNHLLLATGSSDY 723
Query: 152 SVRLWNVQTGICI-LIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
++LW++ C +F GH N V F P D +ASC D T+K+W +K
Sbjct: 724 FLKLWDLNQKECRNTMF----GHTNSVSHCRFSPDDKL-LASCSADGTLKLWDVK 773
Score = 76 (31.8 bits), Expect = 3.0e-05, Sum P(3) = 3.0e-05
Identities = 21/70 (30%), Positives = 34/70 (48%)
Query: 302 HYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAI 361
H A G+ +G I V EL ++ + +R H K+ +R + DG ++S +D AI
Sbjct: 972 HLQYLAFGSDDGAIQVLELLNNR-LFQSRTRH---KNTVRHIQFTTDGKNVISSSDDSAI 1027
Query: 362 --WRWDAIPT 369
W W + T
Sbjct: 1028 QVWNWQSEET 1037
Score = 46 (21.3 bits), Expect = 3.0e-05, Sum P(3) = 3.0e-05
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 239 HSNYVDCNRWL--GDFILSKSVDNEIVLWEPK 268
H ++V C + G L+ S D I LWE K
Sbjct: 881 HLSWVHCAMFSPDGSSFLTSSDDETIRLWETK 912
>POMBASE|SPAC343.04c [details] [associations]
symbol:SPAC343.04c "WD repeat protein, human WDR26
family, ubiquitin ligase complex subunit (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0034657 "GID complex" evidence=ISO] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0044732 "mitotic spindle pole body" evidence=IDA] [GO:0045721
"negative regulation of gluconeogenesis" evidence=ISO] [GO:0010969
"regulation of pheromone-dependent signal transduction involved in
conjugation with cellular fusion" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 PomBase:SPAC343.04c GO:GO:0005829
GO:GO:0005634 EMBL:CU329670 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044732
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045721
HSSP:P16649 PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
GO:GO:0034657 OrthoDB:EOG43R6WJ HOGENOM:HOG000160946 OMA:IRGQFYQ
PIR:T38653 RefSeq:NP_593424.1 ProteinModelPortal:Q9UT85
EnsemblFungi:SPAC343.04c.1 GeneID:2543079 KEGG:spo:SPAC343.04c
NextBio:20804107 Uniprot:Q9UT85
Length = 507
Score = 129 (50.5 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 30/95 (31%), Positives = 53/95 (55%)
Query: 114 DVSNEKLHKSFVGH--GDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAG 171
D+ ++ + ++GH G+ + + V+S S+D+ +R+W+ ++G + A
Sbjct: 411 DLEENRIVRQYMGHKLGNFLIGSCFGGKDDTFVLSGSEDDKIRIWHRESG---KLLATLS 467
Query: 172 GHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKE 206
GH V V ++P D Y+ AS G DNTV+IWS K+
Sbjct: 468 GHVKCVNYVAYNPVDPYQFASAGDDNTVRIWSNKD 502
>UNIPROTKB|E2RR78 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:AAEX03002720
Ensembl:ENSCAFT00000019257 NextBio:20862231 Uniprot:E2RR78
Length = 607
Score = 130 (50.8 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 29/89 (32%), Positives = 48/89 (53%)
Query: 124 FVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFH 183
+ GH ++ ++ P + + + S D++VRLW+ Q G + +F G HR VLS+ F
Sbjct: 440 YAGHLADVDCVKFHP-NSNYLATGSTDKTVRLWSAQQGNSVRLFTG---HRGPVLSLAFS 495
Query: 184 PSDIYRIASCGMDNTVKIWSMKEFWTYVE 212
P+ Y +AS G D +K+W + Y E
Sbjct: 496 PNGKY-LASAGEDQRLKLWDLASGTLYKE 523
Score = 124 (48.7 bits), Expect = 0.00014, P = 0.00014
Identities = 29/111 (26%), Positives = 54/111 (48%)
Query: 100 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 159
+L G + +R+ + F GH + + P + SA +D+ ++LW++
Sbjct: 458 YLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSP-NGKYLASAGEDQRLKLWDLA 516
Query: 160 TGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTY 210
+G ++ GH + + S+ F P D IAS MDN+V++W ++ TY
Sbjct: 517 SGT---LYKELRGHTDNITSLTFSP-DSSLIASASMDNSVRVWDIRN--TY 561
>UNIPROTKB|F1MUW4 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051402 "neuron apoptotic process" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0016505 "apoptotic
protease activator activity" evidence=IEA] [GO:0008635 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process by cytochrome c" evidence=IEA] [GO:0006309 "apoptotic DNA
fragmentation" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IEA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0006952 "defense
response" evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005794 GO:GO:0006952
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900
GO:GO:0051402 GO:GO:0043531 GO:GO:0001843 GO:GO:0006309
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GO:GO:0043293 GO:GO:0016505 OMA:KVCKNSA InterPro:IPR017251
PIRSF:PIRSF037646 GeneTree:ENSGT00700000104017 EMBL:DAAA02013647
EMBL:DAAA02013645 EMBL:DAAA02013646 IPI:IPI00689090
Ensembl:ENSBTAT00000028867 Uniprot:F1MUW4
Length = 1251
Score = 124 (48.7 bits), Expect = 0.00035, P = 0.00035
Identities = 36/127 (28%), Positives = 64/127 (50%)
Query: 89 VSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSAS 148
VS C + +L GG +G I+++++ N ++ +S GH ++ I+ +L+ S+S
Sbjct: 966 VSCCCLSPHLQYLAFGGEDGAIQILELLNNRIFQSRNGHKTTVRHIQFTADGKTLI-SSS 1024
Query: 149 KDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFW 208
D +V++WN Q+ + A H+ V DF R+ S D TVK+W++
Sbjct: 1025 DDSAVQIWNWQSEDPFFLQA----HQETVK--DFRLLKNSRLLSWSFDGTVKVWNI--IT 1076
Query: 209 TYVEKSF 215
+EK F
Sbjct: 1077 RRIEKDF 1083
Score = 99 (39.9 bits), Expect = 3.2e-05, Sum P(3) = 3.2e-05
Identities = 39/175 (22%), Positives = 77/175 (44%)
Query: 34 RPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWA 92
RP V++ S A+ G ++ + V++ G + ++++ DE + A
Sbjct: 614 RPHTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDE-------VLCCA 666
Query: 93 CNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIR-TQPLKPSLVVSASKDE 151
+ D F+ ++ +++ + +L + + H + +N T L+ + S D
Sbjct: 667 FSADD-KFIATCSVDKKVKIWNSMTGELVRIYDEHSEQVNCCHFTNNSNHLLLATGSNDY 725
Query: 152 SVRLWNVQTGICI-LIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
++LW++ C +F GH N V F P D +ASC D T+K+W +K
Sbjct: 726 FLKLWDLNQEECRNTMF----GHTNSVSHCRFSPDDQV-LASCSADGTLKLWDVK 775
Score = 92 (37.4 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 35/128 (27%), Positives = 58/128 (45%)
Query: 80 EDKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDV-SNEKLHKSFVGHGDSINEIRTQP 138
ED E SW+ DG +VA N + + D+ S+ L + +GH ++ P
Sbjct: 797 EDLEVIVKCCSWSA--DGAKIMVAAK-NKVF-LFDIHSSGLLAEMHMGHHSAVQYCDFSP 852
Query: 139 LKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNT 198
VV+ S+ V LW++ +G+ + A GH + V V F P + S D T
Sbjct: 853 HNHLAVVALSQ-YCVELWSMDSGLKV---ADCRGHLSWVHCVMFSPDGSSFLTSSD-DQT 907
Query: 199 VKIWSMKE 206
+++W K+
Sbjct: 908 IRLWETKK 915
Score = 80 (33.2 bits), Expect = 3.2e-05, Sum P(3) = 3.2e-05
Identities = 20/67 (29%), Positives = 33/67 (49%)
Query: 302 HYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGA- 360
H A G +G I + EL ++ + +R H K+ +R + DG T++S +D A
Sbjct: 974 HLQYLAFGGEDGAIQILELLNNR-IFQSRNGH---KTTVRHIQFTADGKTLISSSDDSAV 1029
Query: 361 -IWRWDA 366
IW W +
Sbjct: 1030 QIWNWQS 1036
Score = 45 (20.9 bits), Expect = 3.2e-05, Sum P(3) = 3.2e-05
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 239 HSNYVDCNRWL--GDFILSKSVDNEIVLWEPK 268
H ++V C + G L+ S D I LWE K
Sbjct: 883 HLSWVHCVMFSPDGSSFLTSSDDQTIRLWETK 914
>ZFIN|ZDB-GENE-040426-2903 [details] [associations]
symbol:fbxw11b "F-box and WD-40 domain protein
11b" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-040426-2903 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:BX465186
EMBL:BC056809 IPI:IPI00494842 RefSeq:NP_998669.2 UniGene:Dr.75211
SMR:Q6PGW4 STRING:Q6PGW4 Ensembl:ENSDART00000019252 GeneID:406825
KEGG:dre:406825 CTD:406825 InParanoid:Q6PGW4 NextBio:20818332
Uniprot:Q6PGW4
Length = 527
Score = 127 (49.8 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 31/103 (30%), Positives = 57/103 (55%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
+V G + +RV DV++ ++ + + H +++ +R L+V+ SKD S+ +W++ +
Sbjct: 278 IVTGSSDSTVRVWDVNSGEVLNTLIHHNEAVLHLR---FCNGLMVTCSKDRSIAVWDMAS 334
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWS 203
I + GHR V VDF D Y +++ G D T+K+WS
Sbjct: 335 PTDISLRRVLVGHRAAVNVVDF--DDKYIVSASG-DRTIKVWS 374
Score = 44 (20.5 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 14/57 (24%), Positives = 25/57 (43%)
Query: 309 GNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWD 365
G+ + I +W+++ + + H + IR +D I+S DG I WD
Sbjct: 404 GSSDNTIRLWDIECGACLRVLE-GHEELVRCIR-----FDNKRIVSGAYDGKIKVWD 454
Score = 43 (20.2 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 239 HSNYVDCNRWLGDFILSKSVDNEIVLWE 266
H V C R+ I+S + D +I +W+
Sbjct: 427 HEELVRCIRFDNKRIVSGAYDGKIKVWD 454
Score = 37 (18.1 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 6/14 (42%), Positives = 11/14 (78%)
Query: 253 ILSKSVDNEIVLWE 266
I+S S D+ I++W+
Sbjct: 490 IISSSHDDTILIWD 503
WARNING: HSPs involving 224 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.136 0.433 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 369 369 0.00085 117 3 11 22 0.38 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 474
No. of states in DFA: 625 (66 KB)
Total size of DFA: 284 KB (2147 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 30.96u 0.12s 31.08t Elapsed: 00:00:01
Total cpu time: 31.01u 0.12s 31.13t Elapsed: 00:00:01
Start: Mon May 20 16:43:43 2013 End: Mon May 20 16:43:44 2013
WARNINGS ISSUED: 2