Query 017557
Match_columns 369
No_of_seqs 203 out of 1629
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 16:21:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017557.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017557hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 3.1E-56 1.1E-60 435.7 29.2 341 7-363 103-453 (454)
2 2vch_A Hydroquinone glucosyltr 100.0 1.3E-51 4.4E-56 408.0 35.3 353 3-364 89-469 (480)
3 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 9.6E-51 3.3E-55 402.5 30.4 349 5-365 97-480 (482)
4 2c1x_A UDP-glucose flavonoid 3 100.0 1.7E-50 5.7E-55 397.6 30.6 334 18-366 111-454 (456)
5 2acv_A Triterpene UDP-glucosyl 100.0 5E-49 1.7E-53 388.0 29.7 346 3-363 95-462 (463)
6 2iya_A OLEI, oleandomycin glyc 100.0 8E-36 2.7E-40 290.5 25.0 319 5-363 95-421 (424)
7 1iir_A Glycosyltransferase GTF 100.0 2.6E-33 8.9E-38 272.2 23.6 210 121-367 193-403 (415)
8 4amg_A Snogd; transferase, pol 100.0 6.7E-34 2.3E-38 274.2 17.9 167 165-358 227-395 (400)
9 1rrv_A Glycosyltransferase GTF 100.0 6.1E-33 2.1E-37 269.6 22.4 211 121-367 193-404 (416)
10 3rsc_A CALG2; TDP, enediyne, s 100.0 4.9E-31 1.7E-35 255.6 23.8 305 7-363 106-413 (415)
11 3h4t_A Glycosyltransferase GTF 100.0 6.7E-31 2.3E-35 254.5 24.0 207 120-362 175-381 (404)
12 2p6p_A Glycosyl transferase; X 100.0 7.4E-31 2.5E-35 251.9 22.4 279 8-366 96-382 (384)
13 3ia7_A CALG4; glycosysltransfe 100.0 7.2E-30 2.5E-34 245.8 26.0 305 7-363 90-398 (402)
14 2iyf_A OLED, oleandomycin glyc 100.0 5.7E-30 1.9E-34 249.4 21.7 303 6-360 91-396 (430)
15 2yjn_A ERYCIII, glycosyltransf 100.0 1.2E-29 4E-34 248.4 23.5 298 7-363 132-435 (441)
16 2o6l_A UDP-glucuronosyltransfe 100.0 1.8E-28 6.3E-33 208.8 16.4 164 160-347 6-170 (170)
17 4fzr_A SSFS6; structural genom 99.9 2.2E-27 7.7E-32 228.8 17.7 276 7-358 111-395 (398)
18 3oti_A CALG3; calicheamicin, T 99.9 4.1E-26 1.4E-30 220.0 19.1 273 6-360 117-394 (398)
19 3tsa_A SPNG, NDP-rhamnosyltran 99.9 6.3E-26 2.2E-30 217.9 18.7 272 8-361 103-386 (391)
20 3otg_A CALG1; calicheamicin, T 99.9 2.9E-24 9.8E-29 207.5 26.5 284 8-363 119-408 (412)
21 3s2u_A UDP-N-acetylglucosamine 99.8 1.5E-19 5.2E-24 172.4 17.4 168 173-362 178-354 (365)
22 2jzc_A UDP-N-acetylglucosamine 99.6 1.3E-15 4.5E-20 134.0 10.0 135 170-323 23-196 (224)
23 1f0k_A MURG, UDP-N-acetylgluco 99.6 1.1E-13 3.7E-18 130.9 18.6 166 173-363 181-355 (364)
24 3hbm_A UDP-sugar hydrolase; PS 99.2 3E-10 1E-14 103.7 14.6 118 174-305 156-275 (282)
25 3dzc_A UDP-N-acetylglucosamine 99.0 1.3E-09 4.5E-14 104.6 9.2 139 174-340 229-376 (396)
26 1v4v_A UDP-N-acetylglucosamine 98.9 1.3E-08 4.6E-13 96.2 13.7 137 175-340 198-343 (376)
27 3ot5_A UDP-N-acetylglucosamine 98.9 2.7E-09 9.3E-14 102.6 8.9 140 173-340 222-370 (403)
28 3okp_A GDP-mannose-dependent a 98.9 6.8E-07 2.3E-11 84.5 25.1 276 7-364 74-378 (394)
29 1vgv_A UDP-N-acetylglucosamine 98.9 5.9E-09 2E-13 98.8 9.5 137 174-338 204-349 (384)
30 4hwg_A UDP-N-acetylglucosamine 98.8 1E-08 3.5E-13 97.9 10.5 127 175-325 203-341 (385)
31 3c48_A Predicted glycosyltrans 98.7 2.4E-06 8.2E-11 82.2 21.0 97 234-344 305-408 (438)
32 2jjm_A Glycosyl transferase, g 98.7 2.9E-06 1E-10 80.5 21.1 182 116-325 154-349 (394)
33 2gek_A Phosphatidylinositol ma 98.6 6.2E-06 2.1E-10 78.2 21.7 126 177-325 209-348 (406)
34 3beo_A UDP-N-acetylglucosamine 98.5 3E-07 1E-11 86.6 9.7 137 174-338 204-349 (375)
35 2f9f_A First mannosyl transfer 98.5 8.3E-07 2.8E-11 74.8 11.4 129 177-326 24-162 (177)
36 2r60_A Glycosyl transferase, g 98.3 7.1E-05 2.4E-09 73.3 20.7 79 234-325 334-423 (499)
37 3fro_A GLGA glycogen synthase; 98.2 0.00015 5E-09 69.2 20.2 162 177-364 252-429 (439)
38 2x6q_A Trehalose-synthase TRET 98.2 0.00015 5.2E-09 69.0 19.6 111 234-364 292-413 (416)
39 2iw1_A Lipopolysaccharide core 98.0 2.7E-05 9.3E-10 72.8 11.4 160 175-360 195-369 (374)
40 3s28_A Sucrose synthase 1; gly 97.7 0.0012 4.2E-08 68.5 17.6 78 234-324 639-728 (816)
41 2bfw_A GLGA glycogen synthase; 97.6 0.0012 4.1E-08 55.8 14.2 92 236-342 96-196 (200)
42 3qhp_A Type 1 capsular polysac 97.6 0.00036 1.2E-08 57.3 9.6 92 236-343 57-156 (166)
43 3oy2_A Glycosyltransferase B73 97.5 0.0012 4.2E-08 62.5 13.7 107 237-362 256-387 (413)
44 2vsy_A XCC0866; transferase, g 97.5 0.0015 5.2E-08 64.8 14.8 90 235-339 434-530 (568)
45 2iuy_A Avigt4, glycosyltransfe 97.5 0.0003 1E-08 65.1 9.0 125 178-325 164-307 (342)
46 4gyw_A UDP-N-acetylglucosamine 97.2 0.003 1E-07 64.9 13.3 139 174-325 521-667 (723)
47 3q3e_A HMW1C-like glycosyltran 97.1 0.0031 1.1E-07 62.9 11.2 137 175-325 440-587 (631)
48 2hy7_A Glucuronosyltransferase 97.0 0.034 1.2E-06 52.8 17.8 73 235-326 265-352 (406)
49 1rzu_A Glycogen synthase 1; gl 97.0 0.013 4.6E-07 56.6 14.8 128 177-324 292-438 (485)
50 3rhz_A GTF3, nucleotide sugar 96.9 0.00099 3.4E-08 62.1 6.0 111 236-362 215-337 (339)
51 2qzs_A Glycogen synthase; glyc 96.9 0.011 3.9E-07 57.1 13.6 161 177-363 293-474 (485)
52 2xci_A KDO-transferase, 3-deox 96.5 0.0046 1.6E-07 58.3 7.5 96 236-344 261-362 (374)
53 2x0d_A WSAF; GT4 family, trans 95.3 0.05 1.7E-06 51.8 8.5 84 235-337 295-385 (413)
54 3vue_A GBSS-I, granule-bound s 94.3 0.77 2.6E-05 45.2 14.6 135 177-325 328-476 (536)
55 3tov_A Glycosyl transferase fa 92.4 0.22 7.6E-06 46.1 6.7 97 174-279 184-286 (349)
56 3dfz_A SIRC, precorrin-2 dehyd 90.7 2.7 9.3E-05 36.1 11.3 153 175-352 32-190 (223)
57 1psw_A ADP-heptose LPS heptosy 88.9 0.73 2.5E-05 42.1 6.7 97 174-279 179-286 (348)
58 2gt1_A Lipopolysaccharide hept 86.7 0.21 7.1E-06 45.5 1.5 134 174-325 177-321 (326)
59 1uqt_A Alpha, alpha-trehalose- 84.9 9.3 0.00032 36.8 12.3 109 237-365 333-454 (482)
60 3nb0_A Glycogen [starch] synth 78.3 6.9 0.00023 39.5 8.6 35 246-282 513-551 (725)
61 2iz6_A Molybdenum cofactor car 77.9 15 0.00052 30.1 9.4 134 162-325 34-173 (176)
62 3rg8_A Phosphoribosylaminoimid 76.0 29 0.001 27.9 10.4 137 176-346 3-147 (159)
63 1xmp_A PURE, phosphoribosylami 75.5 31 0.0011 28.0 10.7 142 175-347 11-161 (170)
64 4b4k_A N5-carboxyaminoimidazol 73.8 36 0.0012 27.9 11.9 142 175-346 22-171 (181)
65 3lp6_A Phosphoribosylaminoimid 71.6 40 0.0014 27.5 11.5 142 175-347 7-155 (174)
66 4grd_A N5-CAIR mutase, phospho 70.5 42 0.0014 27.3 10.8 145 174-347 11-162 (173)
67 3t5t_A Putative glycosyltransf 70.0 28 0.00096 33.6 10.5 110 236-364 353-472 (496)
68 3ors_A N5-carboxyaminoimidazol 69.4 43 0.0015 27.0 10.2 140 176-346 4-152 (163)
69 1o4v_A Phosphoribosylaminoimid 68.2 49 0.0017 27.2 11.4 141 175-347 13-161 (183)
70 3trh_A Phosphoribosylaminoimid 67.3 49 0.0017 26.8 10.6 142 175-347 6-156 (169)
71 3kuu_A Phosphoribosylaminoimid 67.3 50 0.0017 26.9 10.7 141 176-347 13-162 (174)
72 1u11_A PURE (N5-carboxyaminoim 67.1 52 0.0018 27.0 10.3 141 176-347 22-171 (182)
73 3oow_A Phosphoribosylaminoimid 61.5 63 0.0022 26.1 11.2 143 176-347 6-155 (166)
74 3irs_A Uncharacterized protein 61.0 50 0.0017 29.0 9.8 190 134-347 81-283 (291)
75 1pjq_A CYSG, siroheme synthase 59.4 53 0.0018 31.2 10.2 149 175-348 13-168 (457)
76 3gl9_A Response regulator; bet 57.7 21 0.00071 26.3 5.8 41 9-49 36-86 (122)
77 2wm1_A 2-amino-3-carboxymucona 54.2 12 0.0004 33.8 4.4 70 139-212 104-176 (336)
78 3l7i_A Teichoic acid biosynthe 54.1 17 0.00059 36.8 6.1 110 239-362 603-718 (729)
79 2lpm_A Two-component response 53.3 12 0.00041 28.6 3.7 38 9-46 43-86 (123)
80 3to5_A CHEY homolog; alpha(5)b 53.2 23 0.00079 27.4 5.4 40 10-49 48-97 (134)
81 3s2u_A UDP-N-acetylglucosamine 50.1 27 0.00094 31.8 6.3 26 251-278 92-120 (365)
82 1kyq_A Met8P, siroheme biosynt 49.2 52 0.0018 29.0 7.6 88 251-348 106-210 (274)
83 4inf_A Metal-dependent hydrola 49.1 92 0.0032 28.6 9.7 72 141-213 142-213 (373)
84 3t6k_A Response regulator rece 47.4 37 0.0013 25.4 5.8 41 9-49 38-88 (136)
85 2ywx_A Phosphoribosylaminoimid 45.9 1.1E+02 0.0039 24.3 10.8 135 178-347 2-143 (157)
86 2h31_A Multifunctional protein 44.6 2E+02 0.007 26.9 11.4 139 174-346 264-410 (425)
87 1o97_C Electron transferring f 44.4 24 0.00083 30.9 4.7 40 9-48 102-148 (264)
88 3m6m_D Sensory/regulatory prot 44.1 33 0.0011 26.0 5.1 40 9-48 48-99 (143)
89 3cg0_A Response regulator rece 43.9 41 0.0014 25.0 5.6 41 9-49 44-92 (140)
90 2wqk_A 5'-nucleotidase SURE; S 43.6 11 0.00037 32.9 2.3 37 11-47 77-127 (251)
91 2pju_A Propionate catabolism o 43.6 20 0.00069 30.7 3.9 28 254-282 64-91 (225)
92 3nrb_A Formyltetrahydrofolate 41.4 48 0.0016 29.4 6.2 114 194-341 155-270 (287)
93 3f6p_A Transcriptional regulat 41.4 37 0.0013 24.7 4.8 41 9-49 36-83 (120)
94 2hbv_A 2-amino-3-carboxymucona 41.1 54 0.0019 29.3 6.7 71 138-213 107-180 (334)
95 3c3m_A Response regulator rece 40.9 52 0.0018 24.5 5.7 39 10-48 38-86 (138)
96 1efv_B Electron transfer flavo 40.8 30 0.001 30.2 4.6 40 9-48 106-152 (255)
97 3pdi_B Nitrogenase MOFE cofact 40.2 23 0.0008 33.8 4.2 35 9-45 365-399 (458)
98 3a10_A Response regulator; pho 39.9 72 0.0025 22.6 6.2 40 9-48 35-82 (116)
99 1dbw_A Transcriptional regulat 39.5 51 0.0017 24.0 5.4 41 9-49 37-85 (126)
100 3gt7_A Sensor protein; structu 39.5 50 0.0017 25.3 5.5 40 9-48 41-90 (154)
101 2rjn_A Response regulator rece 39.3 49 0.0017 25.2 5.4 42 9-50 41-90 (154)
102 3o1l_A Formyltetrahydrofolate 38.9 94 0.0032 27.7 7.7 117 191-341 168-286 (302)
103 1efp_B ETF, protein (electron 38.9 26 0.00088 30.5 3.9 40 9-48 103-149 (252)
104 3obi_A Formyltetrahydrofolate 38.8 52 0.0018 29.2 6.0 115 194-342 156-272 (288)
105 1tmy_A CHEY protein, TMY; chem 38.6 58 0.002 23.3 5.5 41 9-49 37-85 (120)
106 3nhm_A Response regulator; pro 38.6 68 0.0023 23.4 6.1 40 9-48 37-86 (133)
107 3h4t_A Glycosyltransferase GTF 38.0 58 0.002 30.0 6.5 35 177-213 3-37 (404)
108 3u7q_A Nitrogenase molybdenum- 37.9 21 0.00073 34.4 3.5 35 8-44 406-440 (492)
109 2f6k_A Metal-dependent hydrola 37.7 1.6E+02 0.0054 25.5 9.2 70 140-213 85-157 (307)
110 3n0v_A Formyltetrahydrofolate 37.3 62 0.0021 28.6 6.2 115 194-342 156-272 (286)
111 3da8_A Probable 5'-phosphoribo 37.2 1E+02 0.0035 25.9 7.4 116 194-343 79-196 (215)
112 3lou_A Formyltetrahydrofolate 37.1 57 0.002 29.0 6.0 115 194-342 161-277 (292)
113 3grc_A Sensor protein, kinase; 36.9 64 0.0022 23.9 5.7 41 9-49 40-90 (140)
114 2qr3_A Two-component system re 36.9 46 0.0016 24.7 4.8 41 9-49 37-90 (140)
115 1zgz_A Torcad operon transcrip 36.8 63 0.0021 23.2 5.5 41 9-49 36-83 (122)
116 3dez_A OPRT, oprtase, orotate 36.6 33 0.0011 29.7 4.2 41 6-46 85-130 (243)
117 4e7p_A Response regulator; DNA 36.6 59 0.002 24.6 5.5 41 9-49 56-104 (150)
118 2rdm_A Response regulator rece 36.6 70 0.0024 23.3 5.8 41 9-49 39-89 (132)
119 2w36_A Endonuclease V; hypoxan 36.5 52 0.0018 28.1 5.3 39 9-47 91-139 (225)
120 3b2n_A Uncharacterized protein 36.5 61 0.0021 23.9 5.5 41 9-49 39-87 (133)
121 1meo_A Phosophoribosylglycinam 36.4 1.4E+02 0.0047 25.0 8.0 115 194-342 69-185 (209)
122 2a9o_A Response regulator; ess 36.4 76 0.0026 22.5 5.9 40 10-49 36-82 (120)
123 3kb6_A D-lactate dehydrogenase 35.8 70 0.0024 28.9 6.5 103 175-322 142-246 (334)
124 1u0t_A Inorganic polyphosphate 35.6 33 0.0011 30.6 4.3 32 248-281 72-107 (307)
125 3eod_A Protein HNR; response r 35.5 61 0.0021 23.7 5.3 41 9-49 41-89 (130)
126 3pp8_A Glyoxylate/hydroxypyruv 35.4 1.4E+02 0.0047 26.7 8.4 63 175-263 140-203 (315)
127 1srr_A SPO0F, sporulation resp 35.3 61 0.0021 23.4 5.2 40 10-49 38-85 (124)
128 3ia7_A CALG4; glycosysltransfe 35.0 48 0.0017 30.0 5.4 34 177-212 7-40 (402)
129 1vi6_A 30S ribosomal protein S 35.0 25 0.00084 29.7 3.0 31 19-49 115-148 (208)
130 2q5c_A NTRC family transcripti 34.9 15 0.00051 30.7 1.6 74 243-323 42-138 (196)
131 4e5s_A MCCFLIKE protein (BA_56 34.9 51 0.0017 29.9 5.4 72 189-281 63-136 (331)
132 1qkk_A DCTD, C4-dicarboxylate 34.8 1.2E+02 0.004 23.0 7.0 47 272-325 74-120 (155)
133 3u7q_B Nitrogenase molybdenum- 34.8 18 0.00063 35.2 2.5 36 8-45 427-469 (523)
134 2pl1_A Transcriptional regulat 34.3 92 0.0031 22.1 6.1 40 10-49 35-82 (121)
135 3kcq_A Phosphoribosylglycinami 34.2 1E+02 0.0034 26.0 6.8 115 194-342 72-188 (215)
136 3goc_A Endonuclease V; alpha-b 33.8 65 0.0022 27.7 5.5 39 9-47 95-143 (237)
137 1mio_B Nitrogenase molybdenum 33.7 38 0.0013 32.2 4.5 36 8-45 374-409 (458)
138 1xhf_A DYE resistance, aerobic 33.6 84 0.0029 22.5 5.7 41 9-49 37-84 (123)
139 1mb3_A Cell division response 33.6 67 0.0023 23.1 5.2 39 10-48 36-84 (124)
140 3pdi_A Nitrogenase MOFE cofact 33.6 32 0.0011 33.0 4.0 36 8-45 390-425 (483)
141 2oxj_A Hybrid alpha/beta pepti 33.6 69 0.0024 18.3 3.7 28 315-346 5-32 (34)
142 3hv2_A Response regulator/HD d 33.4 64 0.0022 24.5 5.2 41 9-49 48-96 (153)
143 4ds3_A Phosphoribosylglycinami 33.3 84 0.0029 26.4 6.2 114 194-341 76-191 (209)
144 3tqr_A Phosphoribosylglycinami 33.3 1E+02 0.0035 26.0 6.7 115 194-342 73-189 (215)
145 2hy6_A General control protein 33.3 70 0.0024 18.3 3.8 30 314-347 4-33 (34)
146 1qb7_A APRT, adenine phosphori 33.3 69 0.0024 27.3 5.8 40 5-44 55-99 (236)
147 3qjg_A Epidermin biosynthesis 33.0 1.8E+02 0.0061 23.5 7.9 113 176-300 7-143 (175)
148 3cz5_A Two-component response 32.7 91 0.0031 23.5 6.0 41 9-49 41-89 (153)
149 3evt_A Phosphoglycerate dehydr 32.4 1.3E+02 0.0044 27.0 7.7 64 175-263 138-201 (324)
150 2j48_A Two-component sensor ki 32.3 84 0.0029 22.0 5.5 40 9-48 35-84 (119)
151 1zco_A 2-dehydro-3-deoxyphosph 32.3 2.3E+02 0.0077 24.6 9.0 52 272-324 191-256 (262)
152 2qzj_A Two-component response 32.2 70 0.0024 23.7 5.2 40 10-49 39-85 (136)
153 3tsa_A SPNG, NDP-rhamnosyltran 31.7 35 0.0012 31.0 3.8 28 251-280 114-142 (391)
154 3m48_A General control protein 31.5 69 0.0024 18.2 3.5 29 315-347 4-32 (33)
155 3cfy_A Putative LUXO repressor 31.5 81 0.0028 23.4 5.4 40 9-48 38-85 (137)
156 2vqe_B 30S ribosomal protein S 31.3 31 0.0011 30.1 3.1 33 19-51 158-193 (256)
157 3bch_A 40S ribosomal protein S 31.3 30 0.001 30.1 3.0 32 19-50 151-185 (253)
158 3cu5_A Two component transcrip 31.2 73 0.0025 23.8 5.2 39 10-48 40-86 (141)
159 1jkx_A GART;, phosphoribosylgl 31.1 1.2E+02 0.0041 25.4 6.8 114 194-341 69-184 (212)
160 3eul_A Possible nitrate/nitrit 31.0 72 0.0025 24.1 5.2 41 9-49 51-99 (152)
161 3bbn_B Ribosomal protein S2; s 31.0 19 0.00063 31.0 1.6 31 19-49 157-190 (231)
162 3auf_A Glycinamide ribonucleot 30.9 1.2E+02 0.0042 25.7 6.9 114 194-341 91-206 (229)
163 4i6k_A Amidohydrolase family p 30.9 1.2E+02 0.0041 26.4 7.2 72 133-212 83-158 (294)
164 2etv_A Iron(III) ABC transport 30.9 26 0.0009 31.8 2.8 36 10-46 88-125 (346)
165 2jk1_A HUPR, hydrogenase trans 30.9 1.4E+02 0.0049 21.8 6.9 47 273-325 72-118 (139)
166 3sz8_A 2-dehydro-3-deoxyphosph 30.7 2.8E+02 0.0095 24.4 9.7 33 272-305 194-243 (285)
167 3kht_A Response regulator; PSI 30.5 85 0.0029 23.3 5.5 40 9-48 41-90 (144)
168 3j20_B 30S ribosomal protein S 30.5 32 0.0011 28.9 3.0 31 19-49 111-144 (202)
169 1hjr_A Holliday junction resol 30.3 56 0.0019 26.1 4.3 48 4-51 44-107 (158)
170 3ga2_A Endonuclease V; alpha-b 29.9 54 0.0018 28.4 4.3 39 9-47 97-145 (246)
171 3c3g_A Alpha/beta peptide with 29.8 76 0.0026 18.0 3.4 28 315-346 4-31 (33)
172 1p6q_A CHEY2; chemotaxis, sign 29.8 79 0.0027 22.9 5.0 39 9-47 41-89 (129)
173 3i42_A Response regulator rece 29.3 75 0.0026 23.0 4.8 40 9-48 37-86 (127)
174 3av3_A Phosphoribosylglycinami 29.2 1.5E+02 0.005 24.8 7.0 113 195-341 73-187 (212)
175 4hn9_A Iron complex transport 29.1 36 0.0012 30.6 3.3 37 10-47 108-145 (335)
176 3md9_A Hemin-binding periplasm 29.0 56 0.0019 27.8 4.5 36 10-46 51-89 (255)
177 3c97_A Signal transduction his 28.9 1.2E+02 0.004 22.4 6.0 30 9-38 44-76 (140)
178 3p9x_A Phosphoribosylglycinami 28.9 1.5E+02 0.005 24.9 6.9 114 194-341 71-186 (211)
179 2b4a_A BH3024; flavodoxin-like 28.7 77 0.0026 23.4 4.9 38 9-46 49-95 (138)
180 1qkk_A DCTD, C4-dicarboxylate 28.5 66 0.0023 24.4 4.5 39 11-49 39-85 (155)
181 3jtm_A Formate dehydrogenase, 28.3 3.1E+02 0.01 24.8 9.6 67 175-264 165-231 (351)
182 4fzr_A SSFS6; structural genom 28.2 54 0.0019 29.8 4.5 29 251-281 123-152 (398)
183 3ij6_A Uncharacterized metal-d 28.1 51 0.0017 29.4 4.2 72 141-213 92-164 (312)
184 3lte_A Response regulator; str 28.1 1.1E+02 0.0039 22.1 5.7 30 9-38 40-72 (132)
185 2zay_A Response regulator rece 28.1 1E+02 0.0034 23.0 5.5 41 9-49 42-92 (147)
186 1kgs_A DRRD, DNA binding respo 28.0 99 0.0034 25.2 5.8 40 10-49 37-84 (225)
187 4h1h_A LMO1638 protein; MCCF-l 28.0 71 0.0024 28.8 5.1 72 189-281 63-136 (327)
188 1eiw_A Hypothetical protein MT 27.9 46 0.0016 24.9 3.2 65 249-325 36-109 (111)
189 3hzh_A Chemotaxis response reg 27.7 99 0.0034 23.6 5.5 40 9-48 71-120 (157)
190 1ys7_A Transcriptional regulat 27.5 1E+02 0.0035 25.3 5.8 39 10-48 42-88 (233)
191 4ep4_A Crossover junction endo 27.4 1.1E+02 0.0037 24.7 5.6 49 4-52 48-112 (166)
192 1p3y_1 MRSD protein; flavoprot 27.1 1.5E+02 0.0052 24.4 6.6 79 245-325 75-185 (194)
193 2bni_A General control protein 27.1 80 0.0027 18.0 3.2 28 315-346 5-32 (34)
194 2q8p_A Iron-regulated surface 27.0 33 0.0011 29.3 2.6 37 10-47 52-90 (260)
195 3rqi_A Response regulator prot 27.0 71 0.0024 25.4 4.6 41 9-49 41-89 (184)
196 1jbe_A Chemotaxis protein CHEY 26.9 1.2E+02 0.0041 21.8 5.6 39 10-48 40-88 (128)
197 3n53_A Response regulator rece 26.9 67 0.0023 23.8 4.2 41 9-49 36-86 (140)
198 3c3f_A Alpha/beta peptide with 26.8 92 0.0031 17.7 3.4 28 315-346 5-32 (34)
199 3f6c_A Positive transcription 26.8 77 0.0026 23.2 4.5 38 11-48 38-83 (134)
200 2qv0_A Protein MRKE; structura 26.6 1.2E+02 0.0041 22.3 5.7 30 9-38 45-77 (143)
201 3ttc_A HYPF, transcriptional r 26.5 57 0.0019 32.7 4.4 48 6-54 344-393 (657)
202 4a1f_A DNAB helicase, replicat 26.4 59 0.002 29.5 4.3 44 6-49 142-206 (338)
203 1ydh_A AT5G11950; structural g 26.4 2.3E+02 0.0078 23.8 7.7 44 237-281 89-143 (216)
204 3cnb_A DNA-binding response re 26.3 1.1E+02 0.0037 22.5 5.4 41 9-49 44-94 (143)
205 1uo4_A General control protein 26.2 96 0.0033 17.7 3.5 29 315-347 5-33 (34)
206 1mvo_A PHOP response regulator 26.0 1.2E+02 0.0042 22.0 5.6 38 10-47 38-83 (136)
207 2dvt_A Thermophilic reversible 25.9 3.2E+02 0.011 23.6 11.5 69 140-212 89-166 (327)
208 4g2n_A D-isomer specific 2-hyd 25.5 2.1E+02 0.0072 25.9 7.8 63 175-263 174-237 (345)
209 3oet_A Erythronate-4-phosphate 25.5 73 0.0025 29.5 4.8 62 175-264 120-181 (381)
210 1zl0_A Hypothetical protein PA 25.4 97 0.0033 27.8 5.4 74 188-282 64-139 (311)
211 3l4e_A Uncharacterized peptida 25.1 79 0.0027 26.4 4.6 46 165-210 18-63 (206)
212 1zh2_A KDP operon transcriptio 25.1 1E+02 0.0035 21.8 4.8 37 13-49 39-82 (121)
213 3h1g_A Chemotaxis protein CHEY 25.1 1.6E+02 0.0055 21.3 6.1 32 18-49 50-91 (129)
214 3psh_A Protein HI_1472; substr 24.9 53 0.0018 29.2 3.7 37 10-47 76-114 (326)
215 1rcu_A Conserved hypothetical 24.9 2.9E+02 0.0099 22.7 9.2 97 162-281 47-150 (195)
216 3m3h_A OPRT, oprtase, orotate 24.8 66 0.0023 27.5 4.0 40 6-45 73-117 (234)
217 3h5i_A Response regulator/sens 24.8 1.4E+02 0.0049 22.0 5.8 39 10-48 40-87 (140)
218 2oqr_A Sensory transduction pr 24.7 1.1E+02 0.0039 24.9 5.6 41 10-50 39-86 (230)
219 3vth_A Hydrogenase maturation 24.6 81 0.0028 32.2 5.2 49 5-54 440-490 (761)
220 2dy0_A APRT, adenine phosphori 24.6 64 0.0022 26.3 3.8 38 7-44 51-91 (190)
221 3sr3_A Microcin immunity prote 24.4 83 0.0028 28.5 4.9 72 189-281 64-137 (336)
222 4dik_A Flavoprotein; TM0755, e 24.4 63 0.0022 30.2 4.2 46 165-210 255-300 (410)
223 2ywr_A Phosphoribosylglycinami 24.2 1.3E+02 0.0046 25.1 5.9 114 194-341 70-185 (216)
224 2qsj_A DNA-binding response re 24.1 78 0.0027 23.9 4.2 40 9-48 39-87 (154)
225 2qvg_A Two component response 24.1 1.3E+02 0.0045 22.1 5.4 41 9-49 43-99 (143)
226 3qw4_B UMP synthase; N-termina 24.1 60 0.002 30.9 4.0 40 6-45 303-345 (453)
227 3fs2_A 2-dehydro-3-deoxyphosph 24.1 1.8E+02 0.0062 25.9 6.8 18 287-305 244-262 (298)
228 1yio_A Response regulatory pro 23.9 84 0.0029 25.3 4.5 40 10-49 39-86 (208)
229 3r0j_A Possible two component 23.7 1.2E+02 0.004 25.4 5.6 41 9-49 57-105 (250)
230 1meo_A Phosophoribosylglycinam 23.7 49 0.0017 27.8 2.9 29 20-48 30-59 (209)
231 1mio_A Nitrogenase molybdenum 23.6 42 0.0014 32.7 2.8 35 8-44 445-479 (533)
232 2i2c_A Probable inorganic poly 23.6 24 0.00083 30.9 1.1 29 251-281 35-69 (272)
233 1k68_A Phytochrome response re 23.3 1.5E+02 0.0052 21.4 5.7 41 9-49 38-95 (140)
234 3n0r_A Response regulator; sig 23.3 1.2E+02 0.0041 26.5 5.6 39 10-48 196-242 (286)
235 3aek_B Light-independent proto 23.2 58 0.002 31.6 3.8 36 8-45 338-373 (525)
236 3cg4_A Response regulator rece 23.0 98 0.0034 22.8 4.5 39 9-47 41-89 (142)
237 1vdm_A Purine phosphoribosyltr 23.0 81 0.0028 24.4 4.1 37 8-44 15-54 (153)
238 2xzm_B RPS0E; ribosome, transl 23.0 30 0.001 29.9 1.5 31 19-49 114-147 (241)
239 2yq5_A D-isomer specific 2-hyd 22.9 1.3E+02 0.0045 27.2 5.9 62 175-263 149-210 (343)
240 1o57_A PUR operon repressor; p 22.9 70 0.0024 28.4 4.0 38 7-44 118-158 (291)
241 1n2z_A Vitamin B12 transport p 22.5 80 0.0027 26.6 4.2 37 10-47 49-88 (245)
242 2r7a_A Bacterial heme binding 22.4 61 0.0021 27.5 3.5 36 10-46 51-89 (256)
243 3rsc_A CALG2; TDP, enediyne, s 22.2 80 0.0027 28.8 4.4 36 176-213 22-57 (415)
244 1a04_A Nitrate/nitrite respons 22.2 1.2E+02 0.0041 24.5 5.2 40 9-48 41-88 (215)
245 1i3c_A Response regulator RCP1 22.1 1.7E+02 0.006 21.8 5.9 32 18-49 60-101 (149)
246 2gkg_A Response regulator homo 21.9 1.1E+02 0.0036 21.8 4.4 46 272-325 79-124 (127)
247 2r25_B Osmosensing histidine p 21.8 2E+02 0.0069 20.9 6.1 31 18-48 51-90 (133)
248 3qua_A Putative uncharacterize 21.8 3.1E+02 0.011 22.6 7.6 102 163-281 43-155 (199)
249 2phj_A 5'-nucleotidase SURE; S 21.6 64 0.0022 28.0 3.3 37 11-47 77-127 (251)
250 4e5n_A Thermostable phosphite 21.5 2.5E+02 0.0085 25.1 7.5 65 175-263 146-210 (330)
251 2gwr_A DNA-binding response re 21.5 95 0.0032 25.8 4.5 36 12-47 42-84 (238)
252 2ffi_A 2-pyrone-4,6-dicarboxyl 21.4 90 0.0031 26.9 4.4 92 140-266 77-173 (288)
253 2a33_A Hypothetical protein; s 21.4 3E+02 0.01 22.9 7.5 102 162-281 34-147 (215)
254 3hg7_A D-isomer specific 2-hyd 21.3 1.4E+02 0.0047 26.9 5.7 65 175-264 141-205 (324)
255 2rjn_A Response regulator rece 21.2 52 0.0018 25.0 2.5 56 272-339 78-134 (154)
256 1fy2_A Aspartyl dipeptidase; s 21.1 1.7E+02 0.0057 24.7 5.9 47 162-210 21-67 (229)
257 2xdq_B Light-independent proto 20.7 65 0.0022 31.1 3.5 37 8-46 361-397 (511)
258 1qgu_B Protein (nitrogenase mo 20.6 84 0.0029 30.4 4.3 36 8-45 423-465 (519)
259 3mm4_A Histidine kinase homolo 20.5 1.5E+02 0.0053 23.9 5.5 39 9-47 96-159 (206)
260 3p9x_A Phosphoribosylglycinami 20.4 59 0.002 27.4 2.8 29 20-48 32-61 (211)
261 1k66_A Phytochrome response re 20.0 2E+02 0.0069 21.0 5.8 32 18-49 61-102 (149)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=3.1e-56 Score=435.65 Aligned_cols=341 Identities=23% Similarity=0.284 Sum_probs=273.7
Q ss_pred cHHHHHHHHhh--cCCCEEEECC-CCChHHHHHHhCCCeEEEeCchHHHHHhhhchhhhhcCCCCCccCCCCCCCCCCCC
Q 017557 7 TEPAIEAIVRD--IKPNIVFFDF-TYWLPSLARKLGIKSIAFVTVSPATVGYLLSPERKLRDKFLTEADLLQPPQGFPPS 83 (369)
Q Consensus 7 ~~~~l~~~l~~--~~pD~vI~D~-~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 83 (369)
+.+.+++++++ .++||||+|+ ++|+.++|+++|||++.|++++++.+..+.+.+...............+..++|+
T Consensus 103 ~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iPg- 181 (454)
T 3hbf_A 103 FKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREKTGSKEVHDVKSIDVLPG- 181 (454)
T ss_dssp HHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHHHHTCCHHHHTTSSCBCCSTT-
T ss_pred HHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHHHhhcCCCccccccccccCCC-
Confidence 34444444443 3789999999 9999999999999999999999998887777554332211000001112223554
Q ss_pred ccccCccccchhhhhcccCCC-chHHHHHHHHhhccCceeeeccccchhhhhhhhhhhhcCcceeEeCCCCCCCCCC--C
Q 017557 84 KIKLRAHEARGLAAATVKDFG-GLSFMERLLLCLTECDAIGFKTCREIEGAYCDCVESQFEKRVILAGPVLPEPPAS--V 160 (369)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~vGp~~~~~~~~--~ 160 (369)
...++..+++..+.. . ... ....+.+..+.+.+++++++||+++||+++++.++..+ |++++|||++...+.. .
T Consensus 182 ~p~~~~~dlp~~~~~-~-~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~~~-~~v~~vGPl~~~~~~~~~~ 258 (454)
T 3hbf_A 182 FPELKASDLPEGVIK-D-IDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNSKF-KLLLNVGPFNLTTPQRKVS 258 (454)
T ss_dssp SCCBCGGGSCTTSSS-C-TTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHTTS-SCEEECCCHHHHSCCSCCC
T ss_pred CCCcChhhCchhhcc-C-CchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHHHhcC-CCEEEECCccccccccccc
Confidence 123555666655432 2 333 44566677788889999999999999999988887655 6899999998643322 2
Q ss_pred chhHHHhhhccCCCCceEEEeeCCCccCCHHHHHHHHHHHHhcCCcEEEEECCCCCCCccccCCchhHHHHhcCCCeeEe
Q 017557 161 LEEEFEMLFSSFKAKSLIFCALGSECVLKKDQFQELILGFELTGLPFFAALKPPTGHDTIESALPEGFEERVKGRGFVHG 240 (369)
Q Consensus 161 ~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~ 240 (369)
.+.++.+||+.++++++|||||||++..+.+++.+++++|+..+++|||+++.. ....+|++|.++++ +|+++.
T Consensus 259 ~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~~~~-----~~~~lp~~~~~~~~-~~~~vv 332 (454)
T 3hbf_A 259 DEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFRGD-----PKEKLPKGFLERTK-TKGKIV 332 (454)
T ss_dssp CTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEECCSC-----HHHHSCTTHHHHTT-TTEEEE
T ss_pred chHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCc-----chhcCCHhHHhhcC-CceEEE
Confidence 356799999998889999999999999889999999999999999999999875 34568888887765 577888
Q ss_pred cccChHHhhcCCCccceeecCCCchHHHHHHhCCcccccccccchhHHHHHHhhhcceEEEEeecCCCCccCHHHHHHHH
Q 017557 241 GWVQQQLILKHPSVGCFVTHCGSGSLSEAMVNECQLVLLPNVGDQIINSRLMGEDLKVGVEVERGDEDGLFTRDGVCKAV 320 (369)
Q Consensus 241 ~~~pq~~lL~~~~~~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~~l~~ai 320 (369)
+|+||.++|+|+++++|||||||||++|++++|||+|++|+++||+.||+++++.||+|+.+...+ +++++|.++|
T Consensus 333 ~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv~l~~~~----~~~~~l~~av 408 (454)
T 3hbf_A 333 AWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVDNGV----LTKESIKKAL 408 (454)
T ss_dssp SSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEEECGGGS----CCHHHHHHHH
T ss_pred eeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCeeEEecCCC----CCHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999779999998766 9999999999
Q ss_pred HHHhccCCcchHHHHHHHHHHHHHHhc----CCCCHHHHHHHHHHHH
Q 017557 321 KAVMDDDSEVGKDARQNHAELREFLIS----PGLENSYVDGFVQELH 363 (369)
Q Consensus 321 ~~ll~~~~~~~~~~~~~a~~l~~~~~~----~~~~~~~~~~~v~~l~ 363 (369)
+++|+ ++++++||+||+++++.+++ +|++.+++++|++++.
T Consensus 409 ~~ll~--~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~i~ 453 (454)
T 3hbf_A 409 ELTMS--SEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIVT 453 (454)
T ss_dssp HHHHS--SHHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHT
T ss_pred HHHHC--CChHHHHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHh
Confidence 99998 44456899999999999874 4677889999999875
No 2
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=1.3e-51 Score=408.02 Aligned_cols=353 Identities=23% Similarity=0.332 Sum_probs=266.9
Q ss_pred hHhhcHHHHHHHHhhc----CC-CEEEECC-CCChHHHHHHhCCCeEEEeCchHHHHHhhhchhhhhcCCCCCccCCCCC
Q 017557 3 AMDLTEPAIEAIVRDI----KP-NIVFFDF-TYWLPSLARKLGIKSIAFVTVSPATVGYLLSPERKLRDKFLTEADLLQP 76 (369)
Q Consensus 3 ~~~~~~~~l~~~l~~~----~p-D~vI~D~-~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (369)
++..+.+.+++++++. ++ ||||+|. +.|+..+|+++|||++.++++++..+..+.+.+...........+...
T Consensus 89 ~~~~~~~~l~~ll~~~~~~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 167 (480)
T 2vch_A 89 TVTRSNPELRKVFDSFVEGGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVSCEFRELTE- 167 (480)
T ss_dssp HHHTTHHHHHHHHHHHHHTTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHHHCCSCGGGCSS-
T ss_pred HHHhhhHHHHHHHHHhccCCCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHHHhcCCCcccccCC-
Confidence 3456778899999874 78 9999999 999999999999999999999888766655433221111000000000
Q ss_pred CCCCCCCccccCccccchhhhhcccCCC-chHHHHHHHHhhccCceeeeccccchhhhhhhhhhhhc--CcceeEeCCCC
Q 017557 77 PQGFPPSKIKLRAHEARGLAAATVKDFG-GLSFMERLLLCLTECDAIGFKTCREIEGAYCDCVESQF--EKRVILAGPVL 153 (369)
Q Consensus 77 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~--~~~~~~vGp~~ 153 (369)
+..+|+ ...+...+++..+ .. +.. .+..+......+++++++++||+++||++.+..+.+.. .+++++|||++
T Consensus 168 ~~~~Pg-~~p~~~~~l~~~~--~~-~~~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~~l~~~~~~~~~v~~vGpl~ 243 (480)
T 2vch_A 168 PLMLPG-CVPVAGKDFLDPA--QD-RKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPGLDKPPVYPVGPLV 243 (480)
T ss_dssp CBCCTT-CCCBCGGGSCGGG--SC-TTSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHHSCCTTCCCEEECCCCC
T ss_pred cccCCC-CCCCChHHCchhh--hc-CCchHHHHHHHHHHhcccCCEEEEcCHHHHhHHHHHHHHhcccCCCcEEEEeccc
Confidence 112232 0112222333222 11 111 23334445566777889999999999998776655321 25899999998
Q ss_pred CCCCC---CCchhHHHhhhccCCCCceEEEeeCCCccCCHHHHHHHHHHHHhcCCcEEEEECCCCCC-----------Cc
Q 017557 154 PEPPA---SVLEEEFEMLFSSFKAKSLIFCALGSECVLKKDQFQELILGFELTGLPFFAALKPPTGH-----------DT 219 (369)
Q Consensus 154 ~~~~~---~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~-----------~~ 219 (369)
..... ...+.++.+||+.++++++|||||||+...+.+++.+++++|+..+++|||+++..... ..
T Consensus 244 ~~~~~~~~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~ 323 (480)
T 2vch_A 244 NIGKQEAKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIRSPSGIANSSYFDSHSQTD 323 (480)
T ss_dssp CCSCSCC-----CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEEECCCCSSTTTTTTCC--CSC
T ss_pred cccccccCccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcCCcEEEEECCccccccccccccccccc
Confidence 75422 23567899999998888999999999998888999999999999999999999865310 10
Q ss_pred cccCCchhHHHHhcCCCeeEecccChHHhhcCCCccceeecCCCchHHHHHHhCCcccccccccchhHHHHHHh-hhcce
Q 017557 220 IESALPEGFEERVKGRGFVHGGWVQQQLILKHPSVGCFVTHCGSGSLSEAMVNECQLVLLPNVGDQIINSRLMG-EDLKV 298 (369)
Q Consensus 220 ~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~~~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~-~~~g~ 298 (369)
....+|++|.++++++++++.+|+||.++|+|+++++|||||||||++||+++|||+|++|+++||+.||++++ +. |+
T Consensus 324 ~~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~l~~~~-G~ 402 (480)
T 2vch_A 324 PLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDI-RA 402 (480)
T ss_dssp GGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTT-CC
T ss_pred hhhhcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCCCEEeccccccchHHHHHHHHHh-Ce
Confidence 11358999999988888888889999999999999999999999999999999999999999999999999984 65 99
Q ss_pred EEEEeecCCCCccCHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHhc---C-CCCHHHHHHHHHHHHh
Q 017557 299 GVEVERGDEDGLFTRDGVCKAVKAVMDDDSEVGKDARQNHAELREFLIS---P-GLENSYVDGFVQELHS 364 (369)
Q Consensus 299 G~~l~~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~a~~l~~~~~~---~-~~~~~~~~~~v~~l~~ 364 (369)
|+.+...+ ++.+++++|+++|+++|+ ++++++||+||+++++.+++ . |++.+++++|++++.+
T Consensus 403 g~~l~~~~-~~~~~~~~l~~av~~vl~--~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~~~~~v~~~~~ 469 (480)
T 2vch_A 403 ALRPRAGD-DGLVRREEVARVVKGLME--GEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVALKWKA 469 (480)
T ss_dssp EECCCCCT-TSCCCHHHHHHHHHHHHT--STHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHHH
T ss_pred EEEeeccc-CCccCHHHHHHHHHHHhc--CcchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 99997641 234999999999999998 56688999999999999886 4 4457889999999875
No 3
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=9.6e-51 Score=402.47 Aligned_cols=349 Identities=17% Similarity=0.261 Sum_probs=262.2
Q ss_pred hhcHHHHHHHHhh-------cCCCEEEECC-CCChHHHHHHhCCCeEEEeCchHHHHHhhhchhhhh-cCC-CCCccC--
Q 017557 5 DLTEPAIEAIVRD-------IKPNIVFFDF-TYWLPSLARKLGIKSIAFVTVSPATVGYLLSPERKL-RDK-FLTEAD-- 72 (369)
Q Consensus 5 ~~~~~~l~~~l~~-------~~pD~vI~D~-~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~-- 72 (369)
+.+.+.+++++++ .+|||||+|. ++|+..+|+++|||++.++++++..+..+.+.+... ... +.....
T Consensus 97 ~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 176 (482)
T 2pq6_A 97 KNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVERGIIPFKDESYL 176 (482)
T ss_dssp TSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHHHHHHTTCSSCSSGGGG
T ss_pred HHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHHHHHHHhcCCCCCcccccc
Confidence 4567888888874 4799999999 999999999999999999999887765544332211 110 111000
Q ss_pred ----CCCCCCCCCCCccccCccccchhhhhcccCCC-chHHHHHHHHhhccCceeeeccccchhhhhhhhhhhhcCccee
Q 017557 73 ----LLQPPQGFPPSKIKLRAHEARGLAAATVKDFG-GLSFMERLLLCLTECDAIGFKTCREIEGAYCDCVESQFEKRVI 147 (369)
Q Consensus 73 ----~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~ 147 (369)
......++|+ ...++..+++.+..... ... ....+....+...+++++++||+++||+++++.+++.+ ++++
T Consensus 177 ~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~vl~nt~~~le~~~~~~~~~~~-~~v~ 253 (482)
T 2pq6_A 177 TNGCLETKVDWIPG-LKNFRLKDIVDFIRTTN-PNDIMLEFFIEVADRVNKDTTILLNTFNELESDVINALSSTI-PSIY 253 (482)
T ss_dssp TSSGGGCBCCSSTT-CCSCBGGGSCGGGCCSC-TTCHHHHHHHHHHHTCCTTCCEEESSCGGGGHHHHHHHHTTC-TTEE
T ss_pred ccccccCccccCCC-CCCCchHHCchhhccCC-cccHHHHHHHHHHHhhccCCEEEEcChHHHhHHHHHHHHHhC-CcEE
Confidence 0111112332 01122223333321111 112 22344456677788999999999999999888888777 7899
Q ss_pred EeCCCCCC-CCC----------CC---chhHHHhhhccCCCCceEEEeeCCCccCCHHHHHHHHHHHHhcCCcEEEEECC
Q 017557 148 LAGPVLPE-PPA----------SV---LEEEFEMLFSSFKAKSLIFCALGSECVLKKDQFQELILGFELTGLPFFAALKP 213 (369)
Q Consensus 148 ~vGp~~~~-~~~----------~~---~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~ 213 (369)
+|||++.. +.. .. .+.++.+||+.++++++|||||||+...+.+++.+++++|+..+++|+|+++.
T Consensus 254 ~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~l~~~~~ 333 (482)
T 2pq6_A 254 PIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPEQLLEFAWGLANCKKSFLWIIRP 333 (482)
T ss_dssp ECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCCCHHHHHHHHHHHHHTTCEEEEECCG
T ss_pred EEcCCcccccccccccccccccccccccchHHHHHHhcCCCCceEEEecCCcccCCHHHHHHHHHHHHhcCCcEEEEEcC
Confidence 99999763 111 11 24468999999888899999999998888888999999999999999999975
Q ss_pred CCCCCccccCCchhHHHHhcCCCeeEecccChHHhhcCCCccceeecCCCchHHHHHHhCCcccccccccchhHHHHHHh
Q 017557 214 PTGHDTIESALPEGFEERVKGRGFVHGGWVQQQLILKHPSVGCFVTHCGSGSLSEAMVNECQLVLLPNVGDQIINSRLMG 293 (369)
Q Consensus 214 ~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~~~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~ 293 (369)
..... ....+|+++.+++ +.|+++.+|+||.++|+|+++++|||||||||++|++++|||+|++|+++||+.||++++
T Consensus 334 ~~~~~-~~~~l~~~~~~~~-~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~ 411 (482)
T 2pq6_A 334 DLVIG-GSVIFSSEFTNEI-ADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQPTDCRFIC 411 (482)
T ss_dssp GGSTT-TGGGSCHHHHHHH-TTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHH
T ss_pred Ccccc-ccccCcHhHHHhc-CCCEEEEeecCHHHHhcCCCCCEEEecCCcchHHHHHHcCCCEEecCcccchHHHHHHHH
Confidence 42110 1123788887776 458899999999999999999999999999999999999999999999999999999997
Q ss_pred hhcceEEEEeecCCCCccCHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHhc----CCCCHHHHHHHHHHHHhc
Q 017557 294 EDLKVGVEVERGDEDGLFTRDGVCKAVKAVMDDDSEVGKDARQNHAELREFLIS----PGLENSYVDGFVQELHSL 365 (369)
Q Consensus 294 ~~~g~G~~l~~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~a~~l~~~~~~----~~~~~~~~~~~v~~l~~~ 365 (369)
+.||+|+.+. .+ +++++|.++|+++|+ +++.++||+||+++++.+++ +|++.+++++|++++.+.
T Consensus 412 ~~~G~g~~l~-~~----~~~~~l~~~i~~ll~--~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~~~~ 480 (482)
T 2pq6_A 412 NEWEIGMEID-TN----VKREELAKLINEVIA--GDKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKVIKDVLLK 480 (482)
T ss_dssp HTSCCEEECC-SS----CCHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHTTCC
T ss_pred HHhCEEEEEC-CC----CCHHHHHHHHHHHHc--CCcHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHhc
Confidence 4349999998 45 999999999999998 22234799999999999986 366789999999998654
No 4
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=1.7e-50 Score=397.64 Aligned_cols=334 Identities=22% Similarity=0.292 Sum_probs=253.7
Q ss_pred cCCCEEEECC-CCChHHHHHHhCCCeEEEeCchHHHHHhhhchhhhhc--CCCCCccCCCCCCCCCCCCccccCccccch
Q 017557 18 IKPNIVFFDF-TYWLPSLARKLGIKSIAFVTVSPATVGYLLSPERKLR--DKFLTEADLLQPPQGFPPSKIKLRAHEARG 94 (369)
Q Consensus 18 ~~pD~vI~D~-~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 94 (369)
.+|||||+|. +.|+..+|+++|||++.++++++..+..+.+...... ...........+..++|+. ..++..+++.
T Consensus 111 ~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~-~~~~~~~lp~ 189 (456)
T 2c1x_A 111 RPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIGVSGIQGREDELLNFIPGM-SKVRFRDLQE 189 (456)
T ss_dssp CCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHHHHHHCSSCCTTCTTCBCTTSTTC-TTCBGGGSCT
T ss_pred CCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHHHHhccCCcccccccccccccCCCC-CcccHHhCch
Confidence 4899999999 8999999999999999999998776654433221110 1000000011112234431 1123333333
Q ss_pred hhhhcccCCC-chHHHHHHHHhhccCceeeeccccchhhhhhhhhhhhcCcceeEeCCCCCCCCCC--CchhHHHhhhcc
Q 017557 95 LAAATVKDFG-GLSFMERLLLCLTECDAIGFKTCREIEGAYCDCVESQFEKRVILAGPVLPEPPAS--VLEEEFEMLFSS 171 (369)
Q Consensus 95 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~vGp~~~~~~~~--~~~~~~~~~l~~ 171 (369)
...... ... ....+.+..+...+++++++||+++||++.++.+++.+ +++++|||++...+.. +.+.++.+|++.
T Consensus 190 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~~~~~-~~~~~vGpl~~~~~~~~~~~~~~~~~wl~~ 267 (456)
T 2c1x_A 190 GIVFGN-LNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLKSKL-KTYLNIGPFNLITPPPVVPNTTGCLQWLKE 267 (456)
T ss_dssp TTSSSC-TTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHHHS-SCEEECCCHHHHC---------CHHHHHHT
T ss_pred hhcCCC-cccHHHHHHHHHHHhhhhCCEEEECChHHHhHHHHHHHHhcC-CCEEEecCcccCcccccccchhhHHHHHhc
Confidence 221111 111 12334445566678999999999999999887777665 6899999998643221 123468999999
Q ss_pred CCCCceEEEeeCCCccCCHHHHHHHHHHHHhcCCcEEEEECCCCCCCccccCCchhHHHHhcCCCeeEecccChHHhhcC
Q 017557 172 FKAKSLIFCALGSECVLKKDQFQELILGFELTGLPFFAALKPPTGHDTIESALPEGFEERVKGRGFVHGGWVQQQLILKH 251 (369)
Q Consensus 172 ~~~~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~ 251 (369)
.+++++|||||||.+..+.+++.+++++|+..+++|||+++.. ....+|++|.+++ +.|+++.+|+||.++|+|
T Consensus 268 ~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~-----~~~~l~~~~~~~~-~~~~~v~~w~pq~~vL~h 341 (456)
T 2c1x_A 268 RKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWSLRDK-----ARVHLPEGFLEKT-RGYGMVVPWAPQAEVLAH 341 (456)
T ss_dssp SCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEEECCGG-----GGGGSCTTHHHHH-TTTEEEESCCCHHHHHTS
T ss_pred CCCcceEEEecCccccCCHHHHHHHHHHHHhcCCeEEEEECCc-----chhhCCHHHHhhc-CCceEEecCCCHHHHhcC
Confidence 8888999999999998888889999999999999999999764 2346788887765 358888899999999999
Q ss_pred CCccceeecCCCchHHHHHHhCCcccccccccchhHHHHHHhhhcceEEEEeecCCCCccCHHHHHHHHHHHhccCCcch
Q 017557 252 PSVGCFVTHCGSGSLSEAMVNECQLVLLPNVGDQIINSRLMGEDLKVGVEVERGDEDGLFTRDGVCKAVKAVMDDDSEVG 331 (369)
Q Consensus 252 ~~~~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~~l~~ai~~ll~~~~~~~ 331 (369)
+++++|||||||||++|++++|||+|++|+++||+.||+++++.||+|+.+...+ +++++|.++|+++|+ +++.
T Consensus 342 ~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g~~l~~~~----~~~~~l~~~i~~ll~--~~~~ 415 (456)
T 2c1x_A 342 EAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEGGV----FTKSGLMSCFDQILS--QEKG 415 (456)
T ss_dssp TTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECGGGS----CCHHHHHHHHHHHHH--SHHH
T ss_pred CcCCEEEecCCcchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeEEEecCCC----cCHHHHHHHHHHHHC--CCcH
Confidence 9999999999999999999999999999999999999999999999999998766 999999999999998 3334
Q ss_pred HHHHHHHHHHHHHHhc----CCCCHHHHHHHHHHHHhcc
Q 017557 332 KDARQNHAELREFLIS----PGLENSYVDGFVQELHSLA 366 (369)
Q Consensus 332 ~~~~~~a~~l~~~~~~----~~~~~~~~~~~v~~l~~~~ 366 (369)
++||+||+++++.+++ +|++.+++++|++++.+.+
T Consensus 416 ~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~~~~~~ 454 (456)
T 2c1x_A 416 KKLRENLRALRETADRAVGPKGSSTENFITLVDLVSKPK 454 (456)
T ss_dssp HHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHTSCC
T ss_pred HHHHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHHhcC
Confidence 5899999999999975 3666899999999986644
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=5e-49 Score=387.99 Aligned_cols=346 Identities=20% Similarity=0.294 Sum_probs=261.1
Q ss_pred hHhhcHHHHHHHHhh---cCCCEEEECC-CCChHHHHHHhCCCeEEEeCchHHHHHhhhchhhhhcCCCCCccCCCCCCC
Q 017557 3 AMDLTEPAIEAIVRD---IKPNIVFFDF-TYWLPSLARKLGIKSIAFVTVSPATVGYLLSPERKLRDKFLTEADLLQPPQ 78 (369)
Q Consensus 3 ~~~~~~~~l~~~l~~---~~pD~vI~D~-~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (369)
++..+.+++++++++ .+|||||+|. +.|+..+|+++|||++.++++++..+..+.+.+......+....+......
T Consensus 95 ~~~~~~~~~~~ll~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (463)
T 2acv_A 95 FLESLIPHVKATIKTILSNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIEEVFDDSDRDHQLL 174 (463)
T ss_dssp HHHHTHHHHHHHHHHHCCTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSCTTCCCCCSSGGGCEE
T ss_pred HHHhhhHHHHHHHHhccCCCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhhcccCCCCCccccCcee
Confidence 456678899999987 5899999999 999999999999999999999888766655443221100110000000011
Q ss_pred CCCCCccccCccccchhhhhcccCCCchHHHHHHHHhhccCceeeeccccchhhhhhhhhhhhc--CcceeEeCCCCCCC
Q 017557 79 GFPPSKIKLRAHEARGLAAATVKDFGGLSFMERLLLCLTECDAIGFKTCREIEGAYCDCVESQF--EKRVILAGPVLPEP 156 (369)
Q Consensus 79 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~--~~~~~~vGp~~~~~ 156 (369)
.+|+....+...+++..+ .. +...+..+......++.++.+++||+++||++....+.+.. ++++++|||++...
T Consensus 175 ~~pg~~~~~~~~~l~~~~--~~-~~~~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~~l~~~~~p~~~v~~vGpl~~~~ 251 (463)
T 2acv_A 175 NIPGISNQVPSNVLPDAC--FN-KDGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDHDEKIPPIYAVGPLLDLK 251 (463)
T ss_dssp CCTTCSSCEEGGGSCHHH--HC-TTTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHHHHHHCTTSCCEEECCCCCCSS
T ss_pred ECCCCCCCCChHHCchhh--cC-CchHHHHHHHHHHhcccCCEEEECCHHHHhHHHHHHHHhccccCCcEEEeCCCcccc
Confidence 233310112222333222 11 11123333444566778899999999999998877666544 67899999998754
Q ss_pred C-C--C---CchhHHHhhhccCCCCceEEEeeCCCc-cCCHHHHHHHHHHHHhcCCcEEEEECCCCCCCccccCCchhHH
Q 017557 157 P-A--S---VLEEEFEMLFSSFKAKSLIFCALGSEC-VLKKDQFQELILGFELTGLPFFAALKPPTGHDTIESALPEGFE 229 (369)
Q Consensus 157 ~-~--~---~~~~~~~~~l~~~~~~~~v~vs~GS~~-~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~ 229 (369)
. . . ..+.++.+|++.++++++|||+|||++ ..+.+++.+++++|+..+++|||+++.+ ...+|++|.
T Consensus 252 ~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~------~~~l~~~~~ 325 (463)
T 2acv_A 252 GQPNPKLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLWSNSAE------KKVFPEGFL 325 (463)
T ss_dssp CCCBTTBCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEEECCCC------GGGSCTTHH
T ss_pred cccccccccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEECCC------cccCChhHH
Confidence 2 1 1 245789999999888899999999999 7888889999999999999999999753 124677887
Q ss_pred HHhc-CCCeeEecccChHHhhcCCCccceeecCCCchHHHHHHhCCcccccccccchhHHHHHH-hhhcceEEEEe-ecC
Q 017557 230 ERVK-GRGFVHGGWVQQQLILKHPSVGCFVTHCGSGSLSEAMVNECQLVLLPNVGDQIINSRLM-GEDLKVGVEVE-RGD 306 (369)
Q Consensus 230 ~~~~-~~~~~v~~~~pq~~lL~~~~~~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v-~~~~g~G~~l~-~~~ 306 (369)
+++. +.|+++.+|+||.++|+|+++++|||||||||++|++++|||+|++|+++||+.||+++ ++. |+|+.+. ..+
T Consensus 326 ~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv~~~-g~g~~l~~~~~ 404 (463)
T 2acv_A 326 EWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEW-GVGLGLRVDYR 404 (463)
T ss_dssp HHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTS-CCEEESCSSCC
T ss_pred HhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccchhhhHHHHHHHHHHc-CeEEEEecccC
Confidence 6651 34778889999999999999999999999999999999999999999999999999996 666 9999993 111
Q ss_pred CCC--ccCHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHhc----CCCCHHHHHHHHHHHH
Q 017557 307 EDG--LFTRDGVCKAVKAVMDDDSEVGKDARQNHAELREFLIS----PGLENSYVDGFVQELH 363 (369)
Q Consensus 307 ~~~--~~~~~~l~~ai~~ll~~~~~~~~~~~~~a~~l~~~~~~----~~~~~~~~~~~v~~l~ 363 (369)
.+ .+++++|.++|+++|++ +++||+||+++++.+++ +|++.+++++||+++.
T Consensus 405 -~~~~~~~~~~l~~ai~~ll~~----~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~~ 462 (463)
T 2acv_A 405 -KGSDVVAAEEIEKGLKDLMDK----DSIVHKKVQEMKEMSRNAVVDGGSSLISVGKLIDDIT 462 (463)
T ss_dssp -TTCCCCCHHHHHHHHHHHTCT----TCTHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHH
T ss_pred -CCCccccHHHHHHHHHHHHhc----cHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhc
Confidence 11 48999999999999962 47899999999999875 4667899999999874
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=8e-36 Score=290.47 Aligned_cols=319 Identities=18% Similarity=0.185 Sum_probs=218.9
Q ss_pred hhcHHHHHHHHhhcCCCEEEECC-CCChHHHHHHhCCCeEEEeCchHHHHHhhhchhhhhcCCCCCccCC-CCCCCCCCC
Q 017557 5 DLTEPAIEAIVRDIKPNIVFFDF-TYWLPSLARKLGIKSIAFVTVSPATVGYLLSPERKLRDKFLTEADL-LQPPQGFPP 82 (369)
Q Consensus 5 ~~~~~~l~~~l~~~~pD~vI~D~-~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~ 82 (369)
..+.+.+.+++++.+|||||+|. ..|+..+|+++|||++.+++.++........+..... +...... ..++.....
T Consensus 95 ~~~~~~l~~~l~~~~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 172 (424)
T 2iya_A 95 VRVLPQLEDAYADDRPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGFEEDVPAVQD--PTADRGEEAAAPAGTGD 172 (424)
T ss_dssp HHHHHHHHHHTTTSCCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTHHHHSGGGSC--CCC--------------
T ss_pred HHHHHHHHHHHhccCCCEEEEcCcccHHHHHHHhcCCCEEEEecccccccccccccccccc--ccccccccccccccccc
Confidence 34566788888888999999999 8899999999999999998776421111000000000 0000000 000000000
Q ss_pred CccccCc--cccc----hhhhhcccCCCchHHHHHHHHhhccCceeeeccccchhhhhhhhhhhhcCcceeEeCCCCCCC
Q 017557 83 SKIKLRA--HEAR----GLAAATVKDFGGLSFMERLLLCLTECDAIGFKTCREIEGAYCDCVESQFEKRVILAGPVLPEP 156 (369)
Q Consensus 83 ~~~~~~~--~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~vGp~~~~~ 156 (369)
...+.. .... .+..... ..+.... .......++.+++++.++|+++. ..+++++++|||++...
T Consensus 173 -~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~---~~~~~~~~~~~l~~~~~~l~~~~-----~~~~~~~~~vGp~~~~~ 242 (424)
T 2iya_A 173 -AEEGAEAEDGLVRFFTRLSAFLE-EHGVDTP---ATEFLIAPNRCIVALPRTFQIKG-----DTVGDNYTFVGPTYGDR 242 (424)
T ss_dssp --------HHHHHHHHHHHHHHHH-HTTCCSC---HHHHHHCCSSEEESSCTTTSTTG-----GGCCTTEEECCCCCCCC
T ss_pred -chhhhccchhHHHHHHHHHHHHH-HcCCCCC---HHHhccCCCcEEEEcchhhCCCc-----cCCCCCEEEeCCCCCCc
Confidence 000000 0000 0000011 0100000 11122257889999999998763 45788999999987532
Q ss_pred CCCCchhHHHhhhccCCCCceEEEeeCCCccCCHHHHHHHHHHHHhcCCcEEEEECCCCCCCccccCCchhHHHHhcCCC
Q 017557 157 PASVLEEEFEMLFSSFKAKSLIFCALGSECVLKKDQFQELILGFELTGLPFFAALKPPTGHDTIESALPEGFEERVKGRG 236 (369)
Q Consensus 157 ~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~ 236 (369)
. +..+|++..+++++|||++||......+.+.+++++++..+++++|+++.....+ ....+| .|
T Consensus 243 ~------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~~-~~~~~~---------~~ 306 (424)
T 2iya_A 243 S------HQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLDWHVVLSVGRFVDPA-DLGEVP---------PN 306 (424)
T ss_dssp G------GGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTTCSSEEEEECCTTSCGG-GGCSCC---------TT
T ss_pred c------cCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhcCCcEEEEEECCcCChH-HhccCC---------CC
Confidence 1 1236777666678999999999866678889999999888899999987642111 111222 48
Q ss_pred eeEecccChHHhhcCCCccceeecCCCchHHHHHHhCCcccccccccchhHHHHHHhhhcceEEEEeecCCCCccCHHHH
Q 017557 237 FVHGGWVQQQLILKHPSVGCFVTHCGSGSLSEAMVNECQLVLLPNVGDQIINSRLMGEDLKVGVEVERGDEDGLFTRDGV 316 (369)
Q Consensus 237 ~~v~~~~pq~~lL~~~~~~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~~l 316 (369)
+.+.+|+||.++|+|+++ ||||||+||++|++++|||+|++|...||+.||+++++. |+|+.+...+ +++++|
T Consensus 307 v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~-g~g~~~~~~~----~~~~~l 379 (424)
T 2iya_A 307 VEVHQWVPQLDILTKASA--FITHAGMGSTMEALSNAVPMVAVPQIAEQTMNAERIVEL-GLGRHIPRDQ----VTAEKL 379 (424)
T ss_dssp EEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHT-TSEEECCGGG----CCHHHH
T ss_pred eEEecCCCHHHHHhhCCE--EEECCchhHHHHHHHcCCCEEEecCccchHHHHHHHHHC-CCEEEcCcCC----CCHHHH
Confidence 999999999999999998 999999999999999999999999999999999999998 9999998765 899999
Q ss_pred HHHHHHHhccCCcchHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q 017557 317 CKAVKAVMDDDSEVGKDARQNHAELREFLISPGLENSYVDGFVQELH 363 (369)
Q Consensus 317 ~~ai~~ll~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~v~~l~ 363 (369)
.++|+++|+ +++++++++++++.+++.++..+.++.+.+.+.
T Consensus 380 ~~~i~~ll~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 421 (424)
T 2iya_A 380 REAVLAVAS-----DPGVAERLAAVRQEIREAGGARAAADILEGILA 421 (424)
T ss_dssp HHHHHHHHH-----CHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHc-----CHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHh
Confidence 999999998 789999999999999976655555555544443
No 7
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=2.6e-33 Score=272.19 Aligned_cols=210 Identities=13% Similarity=0.075 Sum_probs=169.4
Q ss_pred eeeeccccchhh-hhhhhhhhhcCcceeEeCCCCCCCCCCCchhHHHhhhccCCCCceEEEeeCCCccCCHHHHHHHHHH
Q 017557 121 AIGFKTCREIEG-AYCDCVESQFEKRVILAGPVLPEPPASVLEEEFEMLFSSFKAKSLIFCALGSECVLKKDQFQELILG 199 (369)
Q Consensus 121 ~~l~~s~~~l~~-~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~~ 199 (369)
.+++|++++|++ +. ..+ ++++|||++.... ...+.++.+|++.. +++|||+|||.. ...+.+..++++
T Consensus 193 ~~l~~~~~~l~~~~~-----~~~--~~~~vG~~~~~~~-~~~~~~~~~~l~~~--~~~v~v~~Gs~~-~~~~~~~~~~~a 261 (415)
T 1iir_A 193 HPWVAADPVLAPLQP-----TDL--DAVQTGAWILPDE-RPLSPELAAFLDAG--PPPVYLGFGSLG-APADAVRVAIDA 261 (415)
T ss_dssp SCEECSCTTTSCCCC-----CSS--CCEECCCCCCCCC-CCCCHHHHHHHHTS--SCCEEEECC----CCHHHHHHHHHH
T ss_pred CEEEeeChhhcCCCc-----ccC--CeEeeCCCccCcc-cCCCHHHHHHHhhC--CCeEEEeCCCCC-CcHHHHHHHHHH
Confidence 789999999987 42 223 7999999987543 23577899999865 369999999997 567778889999
Q ss_pred HHhcCCcEEEEECCCCCCCccccCCchhHHHHhcCCCeeEecccChHHhhcCCCccceeecCCCchHHHHHHhCCccccc
Q 017557 200 FELTGLPFFAALKPPTGHDTIESALPEGFEERVKGRGFVHGGWVQQQLILKHPSVGCFVTHCGSGSLSEAMVNECQLVLL 279 (369)
Q Consensus 200 l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~~~~~ItHgG~~s~~Eal~~GvP~i~~ 279 (369)
++..+.+++|+++..... ...+| +|+++.+|+||.++|+++++ ||||||+||++|++++|||+|++
T Consensus 262 l~~~~~~~v~~~g~~~~~---~~~~~---------~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~ 327 (415)
T 1iir_A 262 IRAHGRRVILSRGWADLV---LPDDG---------ADCFAIGEVNHQVLFGRVAA--VIHHGGAGTTHVAARAGAPQILL 327 (415)
T ss_dssp HHHTTCCEEECTTCTTCC---CSSCG---------GGEEECSSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEEC
T ss_pred HHHCCCeEEEEeCCCccc---ccCCC---------CCEEEeCcCChHHHHhhCCE--EEeCCChhHHHHHHHcCCCEEEC
Confidence 998899999998764211 11233 38999999999999988888 99999999999999999999999
Q ss_pred ccccchhHHHHHHhhhcceEEEEeecCCCCccCHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHhcCCCCHHHHHHHH
Q 017557 280 PNVGDQIINSRLMGEDLKVGVEVERGDEDGLFTRDGVCKAVKAVMDDDSEVGKDARQNHAELREFLISPGLENSYVDGFV 359 (369)
Q Consensus 280 P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~v 359 (369)
|+..||+.||+++++. |+|+.++..+ ++.+.|.++|+++ + +++|+++++++++.++. ....+.+.+++
T Consensus 328 p~~~dQ~~na~~l~~~-g~g~~~~~~~----~~~~~l~~~i~~l-~-----~~~~~~~~~~~~~~~~~-~~~~~~~~~~i 395 (415)
T 1iir_A 328 PQMADQPYYAGRVAEL-GVGVAHDGPI----PTFDSLSAALATA-L-----TPETHARATAVAGTIRT-DGAAVAARLLL 395 (415)
T ss_dssp CCSTTHHHHHHHHHHH-TSEEECSSSS----CCHHHHHHHHHHH-T-----SHHHHHHHHHHHHHSCS-CHHHHHHHHHH
T ss_pred CCCCccHHHHHHHHHC-CCcccCCcCC----CCHHHHHHHHHHH-c-----CHHHHHHHHHHHHHHhh-cChHHHHHHHH
Confidence 9999999999999998 9999998766 8999999999999 8 79999999999999875 34455566666
Q ss_pred HHHHhccc
Q 017557 360 QELHSLAD 367 (369)
Q Consensus 360 ~~l~~~~~ 367 (369)
+++.++++
T Consensus 396 ~~~~~~~~ 403 (415)
T 1iir_A 396 DAVSREKP 403 (415)
T ss_dssp HHHHTC--
T ss_pred HHHHhccc
Confidence 66666543
No 8
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=6.7e-34 Score=274.17 Aligned_cols=167 Identities=16% Similarity=0.214 Sum_probs=137.6
Q ss_pred HHhhhccCCCCceEEEeeCCCccCC--HHHHHHHHHHHHhcCCcEEEEECCCCCCCccccCCchhHHHHhcCCCeeEecc
Q 017557 165 FEMLFSSFKAKSLIFCALGSECVLK--KDQFQELILGFELTGLPFFAALKPPTGHDTIESALPEGFEERVKGRGFVHGGW 242 (369)
Q Consensus 165 ~~~~l~~~~~~~~v~vs~GS~~~~~--~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~ 242 (369)
+.+|++..+++++|||||||+.... .+.+.++++++...+.+++|..+..... ....+|+ |+++.+|
T Consensus 227 ~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~--~~~~~~~---------~v~~~~~ 295 (400)
T 4amg_A 227 LPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFVLTLGGGDLA--LLGELPA---------NVRVVEW 295 (400)
T ss_dssp CCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEEEECCTTCCC--CCCCCCT---------TEEEECC
T ss_pred CcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccCceEEEEecCcccc--ccccCCC---------CEEEEee
Confidence 3458888888999999999987644 3568889999999999999998765321 1334454 9999999
Q ss_pred cChHHhhcCCCccceeecCCCchHHHHHHhCCcccccccccchhHHHHHHhhhcceEEEEeecCCCCccCHHHHHHHHHH
Q 017557 243 VQQQLILKHPSVGCFVTHCGSGSLSEAMVNECQLVLLPNVGDQIINSRLMGEDLKVGVEVERGDEDGLFTRDGVCKAVKA 322 (369)
Q Consensus 243 ~pq~~lL~~~~~~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~~l~~ai~~ 322 (369)
+||.++|+|+++ ||||||+||++||+++|||+|++|+++||+.||+++++. |+|+.++..+ ++++ +|++
T Consensus 296 ~p~~~lL~~~~~--~v~h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~~-G~g~~l~~~~----~~~~----al~~ 364 (400)
T 4amg_A 296 IPLGALLETCDA--IIHHGGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTGL-GIGFDAEAGS----LGAE----QCRR 364 (400)
T ss_dssp CCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCC---CHHHHHHHHHH-TSEEECCTTT----CSHH----HHHH
T ss_pred cCHHHHhhhhhh--eeccCCccHHHHHHHhCCCEEEecCcccHHHHHHHHHHC-CCEEEcCCCC----chHH----HHHH
Confidence 999999999998 999999999999999999999999999999999999999 9999998776 6654 6778
Q ss_pred HhccCCcchHHHHHHHHHHHHHHhcCCCCHHHHHHH
Q 017557 323 VMDDDSEVGKDARQNHAELREFLISPGLENSYVDGF 358 (369)
Q Consensus 323 ll~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~ 358 (369)
+|+ |++||+||+++++.+++.++..+.++.+
T Consensus 365 lL~-----d~~~r~~a~~l~~~~~~~~~~~~~a~~l 395 (400)
T 4amg_A 365 LLD-----DAGLREAALRVRQEMSEMPPPAETAAXL 395 (400)
T ss_dssp HHH-----CHHHHHHHHHHHHHHHTSCCHHHHHHHH
T ss_pred HHc-----CHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 898 8999999999999999888665555444
No 9
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=6.1e-33 Score=269.59 Aligned_cols=211 Identities=12% Similarity=0.065 Sum_probs=171.0
Q ss_pred eeeeccccchhhhhhhhhhhhcCcceeEeCCCCCCCCCCCchhHHHhhhccCCCCceEEEeeCCCcc-CCHHHHHHHHHH
Q 017557 121 AIGFKTCREIEGAYCDCVESQFEKRVILAGPVLPEPPASVLEEEFEMLFSSFKAKSLIFCALGSECV-LKKDQFQELILG 199 (369)
Q Consensus 121 ~~l~~s~~~l~~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~-~~~~~~~~~~~~ 199 (369)
.++++++++|+++. ..+ ++++|||++.... ...+.++.+|++.. +++|||++||... ...+.+.+++++
T Consensus 193 ~~l~~~~~~l~~~~-----~~~--~~~~vG~~~~~~~-~~~~~~~~~~l~~~--~~~v~v~~Gs~~~~~~~~~~~~~~~a 262 (416)
T 1rrv_A 193 RPLLAADPVLAPLQ-----PDV--DAVQTGAWLLSDE-RPLPPELEAFLAAG--SPPVHIGFGSSSGRGIADAAKVAVEA 262 (416)
T ss_dssp SCEECSCTTTSCCC-----SSC--CCEECCCCCCCCC-CCCCHHHHHHHHSS--SCCEEECCTTCCSHHHHHHHHHHHHH
T ss_pred CeEEccCccccCCC-----CCC--CeeeECCCccCcc-CCCCHHHHHHHhcC--CCeEEEecCCCCccChHHHHHHHHHH
Confidence 78999999998752 123 7999999987543 23577899999865 3699999999975 344668889999
Q ss_pred HHhcCCcEEEEECCCCCCCccccCCchhHHHHhcCCCeeEecccChHHhhcCCCccceeecCCCchHHHHHHhCCccccc
Q 017557 200 FELTGLPFFAALKPPTGHDTIESALPEGFEERVKGRGFVHGGWVQQQLILKHPSVGCFVTHCGSGSLSEAMVNECQLVLL 279 (369)
Q Consensus 200 l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~~~~~ItHgG~~s~~Eal~~GvP~i~~ 279 (369)
++..+++++|+++..... ...+| +|+.+.+|+||.++|+++++ ||||||+||++||+++|||+|++
T Consensus 263 l~~~~~~~v~~~g~~~~~---~~~~~---------~~v~~~~~~~~~~ll~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~ 328 (416)
T 1rrv_A 263 IRAQGRRVILSRGWTELV---LPDDR---------DDCFAIDEVNFQALFRRVAA--VIHHGSAGTEHVATRAGVPQLVI 328 (416)
T ss_dssp HHHTTCCEEEECTTTTCC---CSCCC---------TTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEEC
T ss_pred HHHCCCeEEEEeCCcccc---ccCCC---------CCEEEeccCChHHHhccCCE--EEecCChhHHHHHHHcCCCEEEc
Confidence 998899999998865210 11223 48999999999999988888 99999999999999999999999
Q ss_pred ccccchhHHHHHHhhhcceEEEEeecCCCCccCHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHhcCCCCHHHHHHHH
Q 017557 280 PNVGDQIINSRLMGEDLKVGVEVERGDEDGLFTRDGVCKAVKAVMDDDSEVGKDARQNHAELREFLISPGLENSYVDGFV 359 (369)
Q Consensus 280 P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~v 359 (369)
|+..||+.||+++++. |+|+.++..+ ++++.|.++|+++ . +++|+++++++++.+++.++. +.++.++
T Consensus 329 p~~~dQ~~na~~l~~~-g~g~~~~~~~----~~~~~l~~~i~~l-~-----~~~~~~~~~~~~~~~~~~~~~-~~~~~i~ 396 (416)
T 1rrv_A 329 PRNTDQPYFAGRVAAL-GIGVAHDGPT----PTFESLSAALTTV-L-----APETRARAEAVAGMVLTDGAA-AAADLVL 396 (416)
T ss_dssp CCSBTHHHHHHHHHHH-TSEEECSSSC----CCHHHHHHHHHHH-T-----SHHHHHHHHHHTTTCCCCHHH-HHHHHHH
T ss_pred cCCCCcHHHHHHHHHC-CCccCCCCCC----CCHHHHHHHHHHh-h-----CHHHHHHHHHHHHHHhhcCcH-HHHHHHH
Confidence 9999999999999999 9999998766 8999999999999 8 899999999999999866555 4444442
Q ss_pred HHHHhccc
Q 017557 360 QELHSLAD 367 (369)
Q Consensus 360 ~~l~~~~~ 367 (369)
+++.++++
T Consensus 397 e~~~~~~~ 404 (416)
T 1rrv_A 397 AAVGREKP 404 (416)
T ss_dssp HHHHC---
T ss_pred HHHhccCC
Confidence 77766543
No 10
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=99.98 E-value=4.9e-31 Score=255.61 Aligned_cols=305 Identities=17% Similarity=0.164 Sum_probs=213.5
Q ss_pred cHHHHHHHHhhcCCCEEEEC-C-CCChHHHHHHhCCCeEEEeCchHHHHHhhhchhhhhcCCCCCccCCCCCCCCCCCCc
Q 017557 7 TEPAIEAIVRDIKPNIVFFD-F-TYWLPSLARKLGIKSIAFVTVSPATVGYLLSPERKLRDKFLTEADLLQPPQGFPPSK 84 (369)
Q Consensus 7 ~~~~l~~~l~~~~pD~vI~D-~-~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 84 (369)
+...+.+.+++.+||+||+| . .+++..+|+++|||++.+.+.......... ....... .. ...|.
T Consensus 106 ~~~~l~~~l~~~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~~-~~~~~~~-------~~---~~~p~-- 172 (415)
T 3rsc_A 106 VLRATAEALDGDVPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNEHYSF-SQDMVTL-------AG---TIDPL-- 172 (415)
T ss_dssp HHHHHHHHHSSSCCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCSSCCH-HHHHHHH-------HT---CCCGG--
T ss_pred HHHHHHHHHhccCCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccCcccc-ccccccc-------cc---cCChh--
Confidence 44667788888899999999 6 888999999999999998755432100000 0000000 00 00000
Q ss_pred cccCccccchhhhhcccCCCchHHHHHHHHhhcc-CceeeeccccchhhhhhhhhhhhcCcceeEeCCCCCCCCCCCchh
Q 017557 85 IKLRAHEARGLAAATVKDFGGLSFMERLLLCLTE-CDAIGFKTCREIEGAYCDCVESQFEKRVILAGPVLPEPPASVLEE 163 (369)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~ 163 (369)
..... ...+..... ..+...... ..... ++..++.+.+.+++. ...++.++.+|||++....
T Consensus 173 -~~~~~-~~~~~~~~~-~~g~~~~~~---~~~~~~~~~~l~~~~~~~~~~-----~~~~~~~~~~vGp~~~~~~------ 235 (415)
T 3rsc_A 173 -DLPVF-RDTLRDLLA-EHGLSRSVV---DCWNHVEQLNLVFVPKAFQIA-----GDTFDDRFVFVGPCFDDRR------ 235 (415)
T ss_dssp -GCHHH-HHHHHHHHH-HTTCCCCHH---HHHTCCCSEEEESSCTTTSTT-----GGGCCTTEEECCCCCCCCG------
T ss_pred -hHHHH-HHHHHHHHH-HcCCCCChh---hhhcCCCCeEEEEcCcccCCC-----cccCCCceEEeCCCCCCcc------
Confidence 00000 000111111 111000000 11122 266777776666654 3457788999999875421
Q ss_pred HHHhhhccCCCCceEEEeeCCCccCCHHHHHHHHHHHHhcCCcEEEEECCCCCCCccccCCchhHHHHhcCCCeeEeccc
Q 017557 164 EFEMLFSSFKAKSLIFCALGSECVLKKDQFQELILGFELTGLPFFAALKPPTGHDTIESALPEGFEERVKGRGFVHGGWV 243 (369)
Q Consensus 164 ~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~ 243 (369)
+..+|....+++++|||++||......+.+..+++++...+.+++|.++.+...+ ....++ .|+.+.+|+
T Consensus 236 ~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~~-~l~~~~---------~~v~~~~~~ 305 (415)
T 3rsc_A 236 FLGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQPWHVVMTLGGQVDPA-ALGDLP---------PNVEAHRWV 305 (415)
T ss_dssp GGCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTTSSCEEEEECTTTSCGG-GGCCCC---------TTEEEESCC
T ss_pred cCcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhcCCcEEEEEeCCCCChH-HhcCCC---------CcEEEEecC
Confidence 2234655556678999999999877777889999999888889999887642111 112233 499999999
Q ss_pred ChHHhhcCCCccceeecCCCchHHHHHHhCCcccccccccchhHHHHHHhhhcceEEEEeecCCCCccCHHHHHHHHHHH
Q 017557 244 QQQLILKHPSVGCFVTHCGSGSLSEAMVNECQLVLLPNVGDQIINSRLMGEDLKVGVEVERGDEDGLFTRDGVCKAVKAV 323 (369)
Q Consensus 244 pq~~lL~~~~~~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~~l~~ai~~l 323 (369)
|+.++|+++++ ||||||+||++|++++|+|+|++|...||+.||+++++. |+|+.+...+ ++++.|.++|+++
T Consensus 306 ~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~~-g~g~~~~~~~----~~~~~l~~~i~~l 378 (415)
T 3rsc_A 306 PHVKVLEQATV--CVTHGGMGTLMEALYWGRPLVVVPQSFDVQPMARRVDQL-GLGAVLPGEK----ADGDTLLAAVGAV 378 (415)
T ss_dssp CHHHHHHHEEE--EEESCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHH-TCEEECCGGG----CCHHHHHHHHHHH
T ss_pred CHHHHHhhCCE--EEECCcHHHHHHHHHhCCCEEEeCCcchHHHHHHHHHHc-CCEEEcccCC----CCHHHHHHHHHHH
Confidence 99999999999 999999999999999999999999999999999999999 9999998876 8999999999999
Q ss_pred hccCCcchHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q 017557 324 MDDDSEVGKDARQNHAELREFLISPGLENSYVDGFVQELH 363 (369)
Q Consensus 324 l~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~v~~l~ 363 (369)
++ +++++++++++++.+.+.++..+.++.+.+.+.
T Consensus 379 l~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 413 (415)
T 3rsc_A 379 AA-----DPALLARVEAMRGHVRRAGGAARAADAVEAYLA 413 (415)
T ss_dssp HT-----CHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHH
T ss_pred Hc-----CHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 99 799999999999999987766666666655543
No 11
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=99.98 E-value=6.7e-31 Score=254.46 Aligned_cols=207 Identities=14% Similarity=0.122 Sum_probs=169.6
Q ss_pred ceeeeccccchhhhhhhhhhhhcCcceeEeCCCCCCCCCCCchhHHHhhhccCCCCceEEEeeCCCccCCHHHHHHHHHH
Q 017557 120 DAIGFKTCREIEGAYCDCVESQFEKRVILAGPVLPEPPASVLEEEFEMLFSSFKAKSLIFCALGSECVLKKDQFQELILG 199 (369)
Q Consensus 120 ~~~l~~s~~~l~~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~~ 199 (369)
+..+.+..+.+.+. +.++++++++|+++.+.. ..+++++.+|++.. +++|||+|||... ..+.+..++++
T Consensus 175 ~~~l~~~~~~l~p~------~~~~~~~~~~G~~~~~~~-~~~~~~l~~~l~~~--~~~Vlv~~Gs~~~-~~~~~~~~~~a 244 (404)
T 3h4t_A 175 DQPWLAADPVLSPL------RPTDLGTVQTGAWILPDQ-RPLSAELEGFLRAG--SPPVYVGFGSGPA-PAEAARVAIEA 244 (404)
T ss_dssp SSCEECSCTTTSCC------CTTCCSCCBCCCCCCCCC-CCCCHHHHHHHHTS--SCCEEECCTTSCC-CTTHHHHHHHH
T ss_pred CCeEEeeCcceeCC------CCCCCCeEEeCccccCCC-CCCCHHHHHHHhcC--CCeEEEECCCCCC-cHHHHHHHHHH
Confidence 44566777777654 356778999998876543 44778899999853 5699999999987 66778889999
Q ss_pred HHhcCCcEEEEECCCCCCCccccCCchhHHHHhcCCCeeEecccChHHhhcCCCccceeecCCCchHHHHHHhCCccccc
Q 017557 200 FELTGLPFFAALKPPTGHDTIESALPEGFEERVKGRGFVHGGWVQQQLILKHPSVGCFVTHCGSGSLSEAMVNECQLVLL 279 (369)
Q Consensus 200 l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~~~~~ItHgG~~s~~Eal~~GvP~i~~ 279 (369)
+...++++||+.+..... ...+ .+|+++.+|+||.++|.++++ ||||||+||+.|++++|||+|++
T Consensus 245 l~~~~~~vv~~~g~~~~~---~~~~---------~~~v~~~~~~~~~~ll~~~d~--~v~~gG~~t~~Eal~~GvP~v~~ 310 (404)
T 3h4t_A 245 VRAQGRRVVLSSGWAGLG---RIDE---------GDDCLVVGEVNHQVLFGRVAA--VVHHGGAGTTTAVTRAGAPQVVV 310 (404)
T ss_dssp HHHTTCCEEEECTTTTCC---CSSC---------CTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEEC
T ss_pred HHhCCCEEEEEeCCcccc---cccC---------CCCEEEecCCCHHHHHhhCcE--EEECCcHHHHHHHHHcCCCEEEc
Confidence 998999999998864211 1112 359999999999999999888 99999999999999999999999
Q ss_pred ccccchhHHHHHHhhhcceEEEEeecCCCCccCHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHhcCCCCHHHHHHHH
Q 017557 280 PNVGDQIINSRLMGEDLKVGVEVERGDEDGLFTRDGVCKAVKAVMDDDSEVGKDARQNHAELREFLISPGLENSYVDGFV 359 (369)
Q Consensus 280 P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~v 359 (369)
|+..||+.||+++++. |+|+.+...+ ++.+.|.++|+++++ ++|+++++++++.+++ .+..+.++.+.
T Consensus 311 p~~~dQ~~na~~~~~~-G~g~~l~~~~----~~~~~l~~ai~~ll~------~~~~~~~~~~~~~~~~-~~~~~~~~~i~ 378 (404)
T 3h4t_A 311 PQKADQPYYAGRVADL-GVGVAHDGPT----PTVESLSAALATALT------PGIRARAAAVAGTIRT-DGTTVAAKLLL 378 (404)
T ss_dssp CCSTTHHHHHHHHHHH-TSEEECSSSS----CCHHHHHHHHHHHTS------HHHHHHHHHHHTTCCC-CHHHHHHHHHH
T ss_pred CCcccHHHHHHHHHHC-CCEeccCcCC----CCHHHHHHHHHHHhC------HHHHHHHHHHHHHHhh-hHHHHHHHHHH
Confidence 9999999999999999 9999998776 899999999999995 6799999999999997 44444444444
Q ss_pred HHH
Q 017557 360 QEL 362 (369)
Q Consensus 360 ~~l 362 (369)
+.+
T Consensus 379 ~~~ 381 (404)
T 3h4t_A 379 EAI 381 (404)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 12
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=99.97 E-value=7.4e-31 Score=251.89 Aligned_cols=279 Identities=14% Similarity=0.135 Sum_probs=203.8
Q ss_pred HHHHHHHHhhcCCCEEEECC-CCChHHHHHHhCCCeEEEeCchHHHHHhhhchhhhhcCCCCCccCCCCCCCCCCCCccc
Q 017557 8 EPAIEAIVRDIKPNIVFFDF-TYWLPSLARKLGIKSIAFVTVSPATVGYLLSPERKLRDKFLTEADLLQPPQGFPPSKIK 86 (369)
Q Consensus 8 ~~~l~~~l~~~~pD~vI~D~-~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 86 (369)
...+.+++++.+||+||+|. ..++..+|+++|||++.+...+.. ...+.
T Consensus 96 ~~~l~~~l~~~~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~-------------------------~~~~~----- 145 (384)
T 2p6p_A 96 LPRMLDFSRAWRPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVD-------------------------ADGIH----- 145 (384)
T ss_dssp HHHHHHHHHHHCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCC-------------------------CTTTH-----
T ss_pred HHHHHHHHhccCCcEEEECcchhhHHHHHHhcCCCEEEeccCCcc-------------------------cchhh-----
Confidence 44566667778999999999 888999999999999987632100 00000
Q ss_pred cCccccchhhhhcccCCCchHHHHHHH-HhhccCceeeeccccchhhhhhhhhhhhcC-cceeEeCCCCCCCCCCCchhH
Q 017557 87 LRAHEARGLAAATVKDFGGLSFMERLL-LCLTECDAIGFKTCREIEGAYCDCVESQFE-KRVILAGPVLPEPPASVLEEE 164 (369)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~-~~~~~vGp~~~~~~~~~~~~~ 164 (369)
..+..... +...+.. .....++.+++++.+.++++. .++ +++.++++ .. +.+
T Consensus 146 ------~~~~~~~~------~~~~~~g~~~~~~~~~~l~~~~~~~~~~~------~~~~~~~~~~~~---~~-----~~~ 199 (384)
T 2p6p_A 146 ------PGADAELR------PELSELGLERLPAPDLFIDICPPSLRPAN------AAPARMMRHVAT---SR-----QCP 199 (384)
T ss_dssp ------HHHHHHTH------HHHHHTTCSSCCCCSEEEECSCGGGSCTT------SCCCEECCCCCC---CC-----CCB
T ss_pred ------HHHHHHHH------HHHHHcCCCCCCCCCeEEEECCHHHCCCC------CCCCCceEecCC---CC-----CCC
Confidence 00000000 0000000 001126788999988887642 232 34555532 11 123
Q ss_pred HHhhhccCCCCceEEEeeCCCccC-----CHHHHHHHHHHHHhcCCcEEEEECCCCCCCccccCCchhHHHHhcCCCeeE
Q 017557 165 FEMLFSSFKAKSLIFCALGSECVL-----KKDQFQELILGFELTGLPFFAALKPPTGHDTIESALPEGFEERVKGRGFVH 239 (369)
Q Consensus 165 ~~~~l~~~~~~~~v~vs~GS~~~~-----~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v 239 (369)
+.+|++..+++++|||++||.... +.+.+..+++++...+++++|+.+.. .. +.+. . .++|+.+
T Consensus 200 ~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~-----~~----~~l~-~-~~~~v~~ 268 (384)
T 2p6p_A 200 LEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDVELIVAAPDT-----VA----EALR-A-EVPQARV 268 (384)
T ss_dssp CCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTTTCEEEEECCHH-----HH----HHHH-H-HCTTSEE
T ss_pred CCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcCCcEEEEEeCCC-----CH----HhhC-C-CCCceEE
Confidence 456887655677999999999864 34668889999988899999987632 01 1111 1 2469999
Q ss_pred ecccChHHhhcCCCccceeecCCCchHHHHHHhCCcccccccccchhHHHHHHhhhcceEEEEeecCCCCccCHHHHHHH
Q 017557 240 GGWVQQQLILKHPSVGCFVTHCGSGSLSEAMVNECQLVLLPNVGDQIINSRLMGEDLKVGVEVERGDEDGLFTRDGVCKA 319 (369)
Q Consensus 240 ~~~~pq~~lL~~~~~~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~~l~~a 319 (369)
+|+||.++|+++++ ||||||+||++||+++|+|+|++|...||+.||+++++. |+|+.+...+ ++.+.|.++
T Consensus 269 -~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~~~~-g~g~~~~~~~----~~~~~l~~~ 340 (384)
T 2p6p_A 269 -GWTPLDVVAPTCDL--LVHHAGGVSTLTGLSAGVPQLLIPKGSVLEAPARRVADY-GAAIALLPGE----DSTEAIADS 340 (384)
T ss_dssp -ECCCHHHHGGGCSE--EEECSCTTHHHHHHHTTCCEEECCCSHHHHHHHHHHHHH-TSEEECCTTC----CCHHHHHHH
T ss_pred -cCCCHHHHHhhCCE--EEeCCcHHHHHHHHHhCCCEEEccCcccchHHHHHHHHC-CCeEecCcCC----CCHHHHHHH
Confidence 99999999999888 999999999999999999999999999999999999999 9999998765 899999999
Q ss_pred HHHHhccCCcchHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcc
Q 017557 320 VKAVMDDDSEVGKDARQNHAELREFLISPGLENSYVDGFVQELHSLA 366 (369)
Q Consensus 320 i~~ll~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~v~~l~~~~ 366 (369)
|+++|+ +++++++++++++.+++.++..+.++.+.+.+..++
T Consensus 341 i~~ll~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 382 (384)
T 2p6p_A 341 CQELQA-----KDTYARRAQDLSREISGMPLPATVVTALEQLAHHHH 382 (384)
T ss_dssp HHHHHH-----CHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHC
T ss_pred HHHHHc-----CHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHhhhcc
Confidence 999998 789999999999999988877777777776666554
No 13
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=99.97 E-value=7.2e-30 Score=245.78 Aligned_cols=305 Identities=17% Similarity=0.172 Sum_probs=212.3
Q ss_pred cHHHHHHHHhhcCCCEEEEC-C-CCChHHHHHHhCCCeEEEeCchHHHHHhhhchhhhhcCCCCCccCCCCCCCCCCCCc
Q 017557 7 TEPAIEAIVRDIKPNIVFFD-F-TYWLPSLARKLGIKSIAFVTVSPATVGYLLSPERKLRDKFLTEADLLQPPQGFPPSK 84 (369)
Q Consensus 7 ~~~~l~~~l~~~~pD~vI~D-~-~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 84 (369)
+.+.+.+.+++.+||+||+| . ..++..+|+++|||++.+.+...........+ ..... .. ...|.
T Consensus 90 ~~~~l~~~l~~~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~~~~-~~~~~-------~~---~~~~~-- 156 (402)
T 3ia7_A 90 ILRAAEEALGDNPPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEHYSLFK-ELWKS-------NG---QRHPA-- 156 (402)
T ss_dssp HHHHHHHHHTTCCCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTTBCHHH-HHHHH-------HT---CCCGG--
T ss_pred HHHHHHHHHhccCCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCccccccc-ccccc-------cc---ccChh--
Confidence 35677788888899999999 6 78899999999999999875543321100000 00000 00 00000
Q ss_pred cccCccccchhhhhcccCCCchHHHHHHHHhhcc-CceeeeccccchhhhhhhhhhhhcCcceeEeCCCCCCCCCCCchh
Q 017557 85 IKLRAHEARGLAAATVKDFGGLSFMERLLLCLTE-CDAIGFKTCREIEGAYCDCVESQFEKRVILAGPVLPEPPASVLEE 163 (369)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~ 163 (369)
.+.. -...+..... ..+.......+ ... .+..++.+.+++++. ...++.++.+|||++....
T Consensus 157 -~~~~-~~~~~~~~~~-~~g~~~~~~~~---~~~~~~~~l~~~~~~~~~~-----~~~~~~~~~~vGp~~~~~~------ 219 (402)
T 3ia7_A 157 -DVEA-VHSVLVDLLG-KYGVDTPVKEY---WDEIEGLTIVFLPKSFQPF-----AETFDERFAFVGPTLTGRD------ 219 (402)
T ss_dssp -GSHH-HHHHHHHHHH-TTTCCSCHHHH---HTCCCSCEEESSCGGGSTT-----GGGCCTTEEECCCCCCC--------
T ss_pred -hHHH-HHHHHHHHHH-HcCCCCChhhh---hcCCCCeEEEEcChHhCCc-----cccCCCCeEEeCCCCCCcc------
Confidence 0000 0001111111 11100000111 122 266676666666543 2456788999999875432
Q ss_pred HHHhhhccCCCCceEEEeeCCCccCCHHHHHHHHHHHHhcCCcEEEEECCCCCCCccccCCchhHHHHhcCCCeeEeccc
Q 017557 164 EFEMLFSSFKAKSLIFCALGSECVLKKDQFQELILGFELTGLPFFAALKPPTGHDTIESALPEGFEERVKGRGFVHGGWV 243 (369)
Q Consensus 164 ~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~ 243 (369)
+...|....+++++||+++||......+.+..+++++...+.++++.++.+...+ ....+ .+|+.+.+|+
T Consensus 220 ~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~---------~~~v~~~~~~ 289 (402)
T 3ia7_A 220 GQPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHVVMAIGGFLDPA-VLGPL---------PPNVEAHQWI 289 (402)
T ss_dssp --CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEEEEECCTTSCGG-GGCSC---------CTTEEEESCC
T ss_pred cCCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCcEEEEEeCCcCChh-hhCCC---------CCcEEEecCC
Confidence 2234555556678999999999877777889999999888888999887642111 11222 3499999999
Q ss_pred ChHHhhcCCCccceeecCCCchHHHHHHhCCccccccc-ccchhHHHHHHhhhcceEEEEeecCCCCccCHHHHHHHHHH
Q 017557 244 QQQLILKHPSVGCFVTHCGSGSLSEAMVNECQLVLLPN-VGDQIINSRLMGEDLKVGVEVERGDEDGLFTRDGVCKAVKA 322 (369)
Q Consensus 244 pq~~lL~~~~~~~~ItHgG~~s~~Eal~~GvP~i~~P~-~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~~l~~ai~~ 322 (369)
|+.++|+++++ ||||||+||+.|++++|+|+|++|. ..||+.|++++++. |+|+.+..++ ++++.|.++|++
T Consensus 290 ~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~~-g~g~~~~~~~----~~~~~l~~~~~~ 362 (402)
T 3ia7_A 290 PFHSVLAHARA--CLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSAERVIEL-GLGSVLRPDQ----LEPASIREAVER 362 (402)
T ss_dssp CHHHHHTTEEE--EEECCCHHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHHT-TSEEECCGGG----CSHHHHHHHHHH
T ss_pred CHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHHc-CCEEEccCCC----CCHHHHHHHHHH
Confidence 99999999999 9999999999999999999999999 99999999999999 9999998876 899999999999
Q ss_pred HhccCCcchHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q 017557 323 VMDDDSEVGKDARQNHAELREFLISPGLENSYVDGFVQELH 363 (369)
Q Consensus 323 ll~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~v~~l~ 363 (369)
+++ +++++++++++++.+.+.++..+.++.+.+.+.
T Consensus 363 ll~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 398 (402)
T 3ia7_A 363 LAA-----DSAVRERVRRMQRDILSSGGPARAADEVEAYLG 398 (402)
T ss_dssp HHH-----CHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHH
T ss_pred HHc-----CHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHh
Confidence 999 799999999999999977666666666655554
No 14
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=99.97 E-value=5.7e-30 Score=249.36 Aligned_cols=303 Identities=17% Similarity=0.187 Sum_probs=204.7
Q ss_pred hcHHHHHHHHhhcCCCEEEECC-CCChHHHHHHhCCCeEEEeCchHHHHHhhhchhhhhcCCCCCccCCCCCCCCCCCCc
Q 017557 6 LTEPAIEAIVRDIKPNIVFFDF-TYWLPSLARKLGIKSIAFVTVSPATVGYLLSPERKLRDKFLTEADLLQPPQGFPPSK 84 (369)
Q Consensus 6 ~~~~~l~~~l~~~~pD~vI~D~-~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 84 (369)
.+...+.+++++.+||+||+|. .+++..+|+++|||++.+++.......+...+.... .. ....+|.
T Consensus 91 ~~~~~l~~~l~~~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~---------~~-~~~~~~~-- 158 (430)
T 2iyf_A 91 QALPQLADAYADDIPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGYEEEVAEPM---------WR-EPRQTER-- 158 (430)
T ss_dssp HHHHHHHHHHTTSCCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTHHHHTHHHH---------HH-HHHHSHH--
T ss_pred HHHHHHHHHhhccCCCEEEECCccHHHHHHHHHcCCCEEEEecccccccccccccccch---------hh-hhccchH--
Confidence 3456777888888999999999 888999999999999998865531100000000000 00 0000000
Q ss_pred cccCccccchhhhhcccCCCchHHHHHHHHhhccCceeeeccccchhhhhhhhhhhhcCcc-eeEeCCCCCCCCCCCchh
Q 017557 85 IKLRAHEARGLAAATVKDFGGLSFMERLLLCLTECDAIGFKTCREIEGAYCDCVESQFEKR-VILAGPVLPEPPASVLEE 163 (369)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~-~~~vGp~~~~~~~~~~~~ 163 (369)
.... ...+..... ..+.... ..+....++.+++++.+++++.. ..++++ +++|||.+....
T Consensus 159 --~~~~-~~~~~~~~~-~~g~~~~---~~~~~~~~~~~l~~~~~~~~~~~-----~~~~~~~v~~vG~~~~~~~------ 220 (430)
T 2iyf_A 159 --GRAY-YARFEAWLK-ENGITEH---PDTFASHPPRSLVLIPKALQPHA-----DRVDEDVYTFVGACQGDRA------ 220 (430)
T ss_dssp --HHHH-HHHHHHHHH-HTTCCSC---HHHHHHCCSSEEECSCGGGSTTG-----GGSCTTTEEECCCCC----------
T ss_pred --HHHH-HHHHHHHHH-HhCCCCC---HHHHhcCCCcEEEeCcHHhCCCc-----ccCCCccEEEeCCcCCCCC------
Confidence 0000 000000000 0000000 11122247889999998887652 346677 999998764321
Q ss_pred HHHhhhccCCCCceEEEeeCCCccCCHHHHHHHHHHHHhc-CCcEEEEECCCCCCCccccCCchhHHHHhcCCCeeEecc
Q 017557 164 EFEMLFSSFKAKSLIFCALGSECVLKKDQFQELILGFELT-GLPFFAALKPPTGHDTIESALPEGFEERVKGRGFVHGGW 242 (369)
Q Consensus 164 ~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~~l~~~-~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~ 242 (369)
+..+|.+..+++++||+++||......+.+.+++++++.. +.+++|+++.+...+ ....+ +.|+.+.+|
T Consensus 221 ~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~~~~~~~~G~~~~~~-~l~~~---------~~~v~~~~~ 290 (430)
T 2iyf_A 221 EEGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPGWHLVLQIGRKVTPA-ELGEL---------PDNVEVHDW 290 (430)
T ss_dssp -CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCTTEEEEEECC---CGG-GGCSC---------CTTEEEESS
T ss_pred CCCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCCeEEEEEeCCCCChH-HhccC---------CCCeEEEec
Confidence 1124655445678999999999854567788899999774 788888887642111 11112 248999999
Q ss_pred cChHHhhcCCCccceeecCCCchHHHHHHhCCcccccccccchhHHHHHHhhhcceEEEEeecCCCCccCHHHHHHHHHH
Q 017557 243 VQQQLILKHPSVGCFVTHCGSGSLSEAMVNECQLVLLPNVGDQIINSRLMGEDLKVGVEVERGDEDGLFTRDGVCKAVKA 322 (369)
Q Consensus 243 ~pq~~lL~~~~~~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~~l~~ai~~ 322 (369)
+||.++|+++++ ||||||+||++||+++|+|+|++|..+||..|++++++. |+|+.+...+ ++.+.|.++|++
T Consensus 291 ~~~~~~l~~ad~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~~-g~g~~~~~~~----~~~~~l~~~i~~ 363 (430)
T 2iyf_A 291 VPQLAILRQADL--FVTHAGAGGSQEGLATATPMIAVPQAVDQFGNADMLQGL-GVARKLATEE----ATADLLRETALA 363 (430)
T ss_dssp CCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHT-TSEEECCCC-----CCHHHHHHHHHH
T ss_pred CCHHHHhhccCE--EEECCCccHHHHHHHhCCCEEECCCccchHHHHHHHHHc-CCEEEcCCCC----CCHHHHHHHHHH
Confidence 999999999998 999999999999999999999999999999999999998 9999998765 899999999999
Q ss_pred HhccCCcchHHHHHHHHHHHHHHhcCCCCHHHHHHHHH
Q 017557 323 VMDDDSEVGKDARQNHAELREFLISPGLENSYVDGFVQ 360 (369)
Q Consensus 323 ll~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~v~ 360 (369)
+++ ++.++++++++++.+++.++..+.++.+.+
T Consensus 364 ll~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 396 (430)
T 2iyf_A 364 LVD-----DPEVARRLRRIQAEMAQEGGTRRAADLIEA 396 (430)
T ss_dssp HHH-----CHHHHHHHHHHHHHHHHHCHHHHHHHHHHT
T ss_pred HHc-----CHHHHHHHHHHHHHHHhcCcHHHHHHHHHH
Confidence 998 788999999999988866544444444443
No 15
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=99.97 E-value=1.2e-29 Score=248.38 Aligned_cols=298 Identities=15% Similarity=0.118 Sum_probs=192.5
Q ss_pred cHHHHHHHHhhcCCCEEEECC-CCChHHHHHHhCCCeEEEeCchHHHHHhhhchhhhhcCCCCCccCCCCCCCCCCCCcc
Q 017557 7 TEPAIEAIVRDIKPNIVFFDF-TYWLPSLARKLGIKSIAFVTVSPATVGYLLSPERKLRDKFLTEADLLQPPQGFPPSKI 85 (369)
Q Consensus 7 ~~~~l~~~l~~~~pD~vI~D~-~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 85 (369)
....+.+++++.+||+||+|. ..++..+|+++|||++.+...+............. ..+.|..
T Consensus 132 ~~~~l~~~~~~~~pDlVv~d~~~~~~~~aA~~lgiP~v~~~~~~~~~~~~~~~~~~~--------------~~~~~~~-- 195 (441)
T 2yjn_A 132 LIEGMVSFCRKWRPDLVIWEPLTFAAPIAAAVTGTPHARLLWGPDITTRARQNFLGL--------------LPDQPEE-- 195 (441)
T ss_dssp HHHHHHHHHHHHCCSEEEECTTCTHHHHHHHHHTCCEEEECSSCCHHHHHHHHHHHH--------------GGGSCTT--
T ss_pred HHHHHHHHHHhcCCCEEEecCcchhHHHHHHHcCCCEEEEecCCCcchhhhhhhhhh--------------ccccccc--
Confidence 344556666778999999999 88899999999999999864332211100000000 0001100
Q ss_pred ccCccccchhh-hhcccCCCchHHHHHHHHhhccCceeeeccccchhhhhhhhhhhhcC-cceeEeCCCCCCCCCCCchh
Q 017557 86 KLRAHEARGLA-AATVKDFGGLSFMERLLLCLTECDAIGFKTCREIEGAYCDCVESQFE-KRVILAGPVLPEPPASVLEE 163 (369)
Q Consensus 86 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~-~~~~~vGp~~~~~~~~~~~~ 163 (369)
... ..+...+ .... ..+...... + +...+.++..+.+.++++ ..++ .++.++++ .. +.
T Consensus 196 ~~~-~~~~~~l~~~~~-~~g~~~~~~---~-~~~~~~~l~~~~~~~~~~------~~~~~~~~~~~~~---~~-----~~ 255 (441)
T 2yjn_A 196 HRE-DPLAEWLTWTLE-KYGGPAFDE---E-VVVGQWTIDPAPAAIRLD------TGLKTVGMRYVDY---NG-----PS 255 (441)
T ss_dssp TCC-CHHHHHHHHHHH-HTTCCCCCG---G-GTSCSSEEECSCGGGSCC------CCCCEEECCCCCC---CS-----SC
T ss_pred ccc-chHHHHHHHHHH-HcCCCCCCc---c-ccCCCeEEEecCccccCC------CCCCCCceeeeCC---CC-----Cc
Confidence 000 0000000 0000 000000000 0 112445555555555542 1232 12333321 11 12
Q ss_pred HHHhhhccCCCCceEEEeeCCCccC---CHHHHHHHHHHHHhcCCcEEEEECCCCCCCccccCCchhHHHHhcCCCeeEe
Q 017557 164 EFEMLFSSFKAKSLIFCALGSECVL---KKDQFQELILGFELTGLPFFAALKPPTGHDTIESALPEGFEERVKGRGFVHG 240 (369)
Q Consensus 164 ~~~~~l~~~~~~~~v~vs~GS~~~~---~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~ 240 (369)
++.+|++..+++++|||++||.... ..+.+..+++++...++++||+.+..... ....+| +|+.+.
T Consensus 256 ~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~--~l~~~~---------~~v~~~ 324 (441)
T 2yjn_A 256 VVPEWLHDEPERRRVCLTLGISSRENSIGQVSIEELLGAVGDVDAEIIATFDAQQLE--GVANIP---------DNVRTV 324 (441)
T ss_dssp CCCGGGSSCCSSCEEEEEC----------CCSTTTTHHHHHTSSSEEEECCCTTTTS--SCSSCC---------SSEEEC
T ss_pred ccchHhhcCCCCCEEEEECCCCcccccChHHHHHHHHHHHHcCCCEEEEEECCcchh--hhccCC---------CCEEEe
Confidence 3457888666678999999999864 23456778899988899999998754211 111222 499999
Q ss_pred cccChHHhhcCCCccceeecCCCchHHHHHHhCCcccccccccchhHHHHHHhhhcceEEEEeecCCCCccCHHHHHHHH
Q 017557 241 GWVQQQLILKHPSVGCFVTHCGSGSLSEAMVNECQLVLLPNVGDQIINSRLMGEDLKVGVEVERGDEDGLFTRDGVCKAV 320 (369)
Q Consensus 241 ~~~pq~~lL~~~~~~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~~l~~ai 320 (369)
+|+||.++|+++++ ||||||+||++|++++|||+|++|...||+.||+++++. |+|+.+...+ ++++.|.++|
T Consensus 325 ~~~~~~~ll~~ad~--~V~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~-g~g~~~~~~~----~~~~~l~~~i 397 (441)
T 2yjn_A 325 GFVPMHALLPTCAA--TVHHGGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQEF-GAGIALPVPE----LTPDQLRESV 397 (441)
T ss_dssp CSCCHHHHGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHH-TSEEECCTTT----CCHHHHHHHH
T ss_pred cCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCCcccHHHHHHHHHHc-CCEEEccccc----CCHHHHHHHH
Confidence 99999999999888 999999999999999999999999999999999999999 9999998776 8999999999
Q ss_pred HHHhccCCcchHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q 017557 321 KAVMDDDSEVGKDARQNHAELREFLISPGLENSYVDGFVQELH 363 (369)
Q Consensus 321 ~~ll~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~v~~l~ 363 (369)
+++++ +++++++++++++.+++.++..+.++.+.+.+.
T Consensus 398 ~~ll~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 435 (441)
T 2yjn_A 398 KRVLD-----DPAHRAGAARMRDDMLAEPSPAEVVGICEELAA 435 (441)
T ss_dssp HHHHH-----CHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHhc-----CHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 99998 799999999999999977665655555554443
No 16
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.96 E-value=1.8e-28 Score=208.80 Aligned_cols=164 Identities=20% Similarity=0.262 Sum_probs=140.1
Q ss_pred CchhHHHhhhccCCCCceEEEeeCCCcc-CCHHHHHHHHHHHHhcCCcEEEEECCCCCCCccccCCchhHHHHhcCCCee
Q 017557 160 VLEEEFEMLFSSFKAKSLIFCALGSECV-LKKDQFQELILGFELTGLPFFAALKPPTGHDTIESALPEGFEERVKGRGFV 238 (369)
Q Consensus 160 ~~~~~~~~~l~~~~~~~~v~vs~GS~~~-~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~ 238 (369)
++++++.+|++..+++++|||++||... .....+..+++++...+++++|+.+... ...++ .|+.
T Consensus 6 ~l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~-----~~~~~---------~~v~ 71 (170)
T 2o6l_A 6 PLPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNK-----PDTLG---------LNTR 71 (170)
T ss_dssp CCCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSC-----CTTCC---------TTEE
T ss_pred CCCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcC-----cccCC---------CcEE
Confidence 4788999999987777899999999974 4667788999999888899999987541 22233 4899
Q ss_pred EecccChHHhhcCCCccceeecCCCchHHHHHHhCCcccccccccchhHHHHHHhhhcceEEEEeecCCCCccCHHHHHH
Q 017557 239 HGGWVQQQLILKHPSVGCFVTHCGSGSLSEAMVNECQLVLLPNVGDQIINSRLMGEDLKVGVEVERGDEDGLFTRDGVCK 318 (369)
Q Consensus 239 v~~~~pq~~lL~~~~~~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~~l~~ 318 (369)
+.+|+||.+++.|+++++||||||+||++|++++|+|+|++|...||..||+++++. |+|+.++..+ ++.+.|.+
T Consensus 72 ~~~~~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~-g~g~~~~~~~----~~~~~l~~ 146 (170)
T 2o6l_A 72 LYKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKAR-GAAVRVDFNT----MSSTDLLN 146 (170)
T ss_dssp EESSCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTT-TSEEECCTTT----CCHHHHHH
T ss_pred EecCCCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHHc-CCeEEecccc----CCHHHHHH
Confidence 999999999997777777999999999999999999999999999999999999999 9999998766 89999999
Q ss_pred HHHHHhccCCcchHHHHHHHHHHHHHHhc
Q 017557 319 AVKAVMDDDSEVGKDARQNHAELREFLIS 347 (369)
Q Consensus 319 ai~~ll~~~~~~~~~~~~~a~~l~~~~~~ 347 (369)
+|+++++ +++|+++++++++.+++
T Consensus 147 ~i~~ll~-----~~~~~~~a~~~~~~~~~ 170 (170)
T 2o6l_A 147 ALKRVIN-----DPSYKENVMKLSRIQHD 170 (170)
T ss_dssp HHHHHHH-----CHHHHHHHHHHC-----
T ss_pred HHHHHHc-----CHHHHHHHHHHHHHhhC
Confidence 9999998 78999999999998863
No 17
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=99.95 E-value=2.2e-27 Score=228.78 Aligned_cols=276 Identities=16% Similarity=0.108 Sum_probs=176.9
Q ss_pred cHHHHHHHHhhcCCCEEEECC-CCChHHHHHHhCCCeEEEeCchHHHHHhhhchhhhhcCCCCCccCCCCCCCCCCCCcc
Q 017557 7 TEPAIEAIVRDIKPNIVFFDF-TYWLPSLARKLGIKSIAFVTVSPATVGYLLSPERKLRDKFLTEADLLQPPQGFPPSKI 85 (369)
Q Consensus 7 ~~~~l~~~l~~~~pD~vI~D~-~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 85 (369)
+...+.+++++.+||+||+|. .+++..+|+++|||++.+.............
T Consensus 111 ~~~~l~~~~~~~~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~~~~~~~~--------------------------- 163 (398)
T 4fzr_A 111 MRDEALALAERWKPDLVLTETYSLTGPLVAATLGIPWIEQSIRLASPELIKSA--------------------------- 163 (398)
T ss_dssp HHHHHHHHHHHHCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCCHHHHHH---------------------------
T ss_pred HHHHHHHHHHhCCCCEEEECccccHHHHHHHhhCCCEEEeccCCCCchhhhHH---------------------------
Confidence 445677888888999999998 8889999999999999876442111000000
Q ss_pred ccCccccchhhhhcccCCCchHHHHHHHHhhccCceeeeccccchhhhhhhhhhhhcCcceeEeCCCCCCCCCCCchhHH
Q 017557 86 KLRAHEARGLAAATVKDFGGLSFMERLLLCLTECDAIGFKTCREIEGAYCDCVESQFEKRVILAGPVLPEPPASVLEEEF 165 (369)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~ 165 (369)
. ...+..... .+. . ......+..+..+.+.+.... .....++.++++.. ...++
T Consensus 164 -~----~~~l~~~~~-~~~-~-------~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~-------~~~~~ 217 (398)
T 4fzr_A 164 -G----VGELAPELA-ELG-L-------TDFPDPLLSIDVCPPSMEAQP-----KPGTTKMRYVPYNG-------RNDQV 217 (398)
T ss_dssp -H----HHHTHHHHH-TTT-C-------SSCCCCSEEEECSCGGGC---------CCCEECCCCCCCC-------SSCCC
T ss_pred -H----HHHHHHHHH-HcC-C-------CCCCCCCeEEEeCChhhCCCC-----CCCCCCeeeeCCCC-------CCCCC
Confidence 0 000000000 000 0 001122444444444443321 01111223333210 11223
Q ss_pred HhhhccCCCCceEEEeeCCCccCC--------HHHHHHHHHHHHhcCCcEEEEECCCCCCCccccCCchhHHHHhcCCCe
Q 017557 166 EMLFSSFKAKSLIFCALGSECVLK--------KDQFQELILGFELTGLPFFAALKPPTGHDTIESALPEGFEERVKGRGF 237 (369)
Q Consensus 166 ~~~l~~~~~~~~v~vs~GS~~~~~--------~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~~ 237 (369)
.+|+...+++++|||++||..... .+.+..+++++...+.+++|+.+..... ....+ .+|+
T Consensus 218 ~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~--~l~~~---------~~~v 286 (398)
T 4fzr_A 218 PSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKLGFEVVVAVSDKLAQ--TLQPL---------PEGV 286 (398)
T ss_dssp CHHHHSCCSSCEEECC----------------CCSHHHHHHHGGGGTCEEEECCCC----------C---------CTTE
T ss_pred chhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHHHHHHhCCCEEEEEeCCcchh--hhccC---------CCcE
Confidence 456666566789999999997532 3457889999988899999987754210 11122 3599
Q ss_pred eEecccChHHhhcCCCccceeecCCCchHHHHHHhCCcccccccccchhHHHHHHhhhcceEEEEeecCCCCccCHHHHH
Q 017557 238 VHGGWVQQQLILKHPSVGCFVTHCGSGSLSEAMVNECQLVLLPNVGDQIINSRLMGEDLKVGVEVERGDEDGLFTRDGVC 317 (369)
Q Consensus 238 ~v~~~~pq~~lL~~~~~~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~~l~ 317 (369)
++.+|+|+.++|+++++ ||||||.||+.||+++|+|+|++|...||..|++++++. |+|+.+...+ ++++.|.
T Consensus 287 ~~~~~~~~~~ll~~ad~--~v~~gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~-g~g~~~~~~~----~~~~~l~ 359 (398)
T 4fzr_A 287 LAAGQFPLSAIMPACDV--VVHHGGHGTTLTCLSEGVPQVSVPVIAEVWDSARLLHAA-GAGVEVPWEQ----AGVESVL 359 (398)
T ss_dssp EEESCCCHHHHGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHT-TSEEECC-----------CHH
T ss_pred EEeCcCCHHHHHhhCCE--EEecCCHHHHHHHHHhCCCEEecCCchhHHHHHHHHHHc-CCEEecCccc----CCHHHHH
Confidence 99999999999999999 999999999999999999999999999999999999999 9999998776 8999999
Q ss_pred HHHHHHhccCCcchHHHHHHHHHHHHHHhcCCCCHHHHHHH
Q 017557 318 KAVKAVMDDDSEVGKDARQNHAELREFLISPGLENSYVDGF 358 (369)
Q Consensus 318 ~ai~~ll~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~ 358 (369)
++|+++++ ++++++++++.++.+++.++..+.++.+
T Consensus 360 ~ai~~ll~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~l 395 (398)
T 4fzr_A 360 AACARIRD-----DSSYVGNARRLAAEMATLPTPADIVRLI 395 (398)
T ss_dssp HHHHHHHH-----CTHHHHHHHHHHHHHTTSCCHHHHHHHH
T ss_pred HHHHHHHh-----CHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 99999998 7999999999999999777655554443
No 18
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=99.94 E-value=4.1e-26 Score=220.01 Aligned_cols=273 Identities=16% Similarity=0.162 Sum_probs=187.8
Q ss_pred hcHHHHHHHHhhcCCCEEEECC-CCChHHHHHHhCCCeEEEeCchHHHHHhhhchhhhhcCCCCCccCCCCCCCCCCCCc
Q 017557 6 LTEPAIEAIVRDIKPNIVFFDF-TYWLPSLARKLGIKSIAFVTVSPATVGYLLSPERKLRDKFLTEADLLQPPQGFPPSK 84 (369)
Q Consensus 6 ~~~~~l~~~l~~~~pD~vI~D~-~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 84 (369)
.+...+.+++++.+||+||+|. .+++..+|+++|||++.+....... ..
T Consensus 117 ~~~~~l~~~l~~~~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~~~~~----------------------------~~-- 166 (398)
T 3oti_A 117 PLVDGTMALVDDYRPDLVVYEQGATVGLLAADRAGVPAVQRNQSAWRT----------------------------RG-- 166 (398)
T ss_dssp GGHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHTCCEEEECCTTCCC----------------------------TT--
T ss_pred HHHHHHHHHHHHcCCCEEEECchhhHHHHHHHHcCCCEEEEeccCCCc----------------------------cc--
Confidence 4567788889999999999998 8889999999999999865321100 00
Q ss_pred cccCccccchhhhhcccCCCchHHHHHHHHhhccCceeeeccccchhhhhhhhhhhhcCcceeEeCCCCCCCCCCCchhH
Q 017557 85 IKLRAHEARGLAAATVKDFGGLSFMERLLLCLTECDAIGFKTCREIEGAYCDCVESQFEKRVILAGPVLPEPPASVLEEE 164 (369)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~ 164 (369)
+ . .... .. ......+........+..+..+.+.+..+.- ...++ +.++. . . .+..
T Consensus 167 --~--~--~~~~-----~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~--~~~~~-~---~----~~~~ 221 (398)
T 3oti_A 167 --M--H--RSIA-----SF-LTDLMDKHQVSLPEPVATIESFPPSLLLEAE---PEGWF--MRWVP-Y---G----GGAV 221 (398)
T ss_dssp --H--H--HHHH-----TT-CHHHHHHTTCCCCCCSEEECSSCGGGGTTSC---CCSBC--CCCCC-C---C----CCEE
T ss_pred --h--h--hHHH-----HH-HHHHHHHcCCCCCCCCeEEEeCCHHHCCCCC---CCCCC--ccccC-C---C----CCcC
Confidence 0 0 0000 00 0000001000011234444444444433210 01111 22221 0 0 1122
Q ss_pred HHhhhccCCCCceEEEeeCCCccC--CHHHHHHHHHHHHhcCCcEEEEECCCCCCCccccCCchhHHHHhcCCCeeEecc
Q 017557 165 FEMLFSSFKAKSLIFCALGSECVL--KKDQFQELILGFELTGLPFFAALKPPTGHDTIESALPEGFEERVKGRGFVHGGW 242 (369)
Q Consensus 165 ~~~~l~~~~~~~~v~vs~GS~~~~--~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~ 242 (369)
+.+|+...+++++|||++||.... ..+.+.++++++...+.+++|+.+..... ....++ +|+.+.+|
T Consensus 222 ~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~g~~~~~--~l~~~~---------~~v~~~~~ 290 (398)
T 3oti_A 222 LGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAGEVDADFVLALGDLDIS--PLGTLP---------RNVRAVGW 290 (398)
T ss_dssp CCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHHHTSSSEEEEECTTSCCG--GGCSCC---------TTEEEESS
T ss_pred CchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHHHcCCCEEEEEECCcChh--hhccCC---------CcEEEEcc
Confidence 335666556678999999999653 44668889999988899999998764210 112233 49999999
Q ss_pred cChHHhhcCCCccceeecCCCchHHHHHHhCCcccccccccchhHHH--HHHhhhcceEEEEeecCCCCccCHHHHHHHH
Q 017557 243 VQQQLILKHPSVGCFVTHCGSGSLSEAMVNECQLVLLPNVGDQIINS--RLMGEDLKVGVEVERGDEDGLFTRDGVCKAV 320 (369)
Q Consensus 243 ~pq~~lL~~~~~~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na--~~v~~~~g~G~~l~~~~~~~~~~~~~l~~ai 320 (369)
+|+.++|+++++ ||||||+||+.||+++|+|+|++|...||..|+ +++++. |+|+.++..+ .+++.|.
T Consensus 291 ~~~~~ll~~ad~--~v~~~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~~~-g~g~~~~~~~----~~~~~l~--- 360 (398)
T 3oti_A 291 TPLHTLLRTCTA--VVHHGGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSRR-GIGLVSTSDK----VDADLLR--- 360 (398)
T ss_dssp CCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHHHHH-TSEEECCGGG----CCHHHHH---
T ss_pred CCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHHHHC-CCEEeeCCCC----CCHHHHH---
Confidence 999999999998 999999999999999999999999999999999 999999 9999998776 7888777
Q ss_pred HHHhccCCcchHHHHHHHHHHHHHHhcCCCCHHHHHHHHH
Q 017557 321 KAVMDDDSEVGKDARQNHAELREFLISPGLENSYVDGFVQ 360 (369)
Q Consensus 321 ~~ll~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~v~ 360 (369)
++++ +++++++++++++.+++.++..+.++.+.+
T Consensus 361 -~ll~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 394 (398)
T 3oti_A 361 -RLIG-----DESLRTAAREVREEMVALPTPAETVRRIVE 394 (398)
T ss_dssp -HHHH-----CHHHHHHHHHHHHHHHTSCCHHHHHHHHHH
T ss_pred -HHHc-----CHHHHHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 7888 899999999999999977766665555443
No 19
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=99.94 E-value=6.3e-26 Score=217.89 Aligned_cols=272 Identities=11% Similarity=0.091 Sum_probs=190.5
Q ss_pred HHHHHHHHhhcCCCEEEECC-CCChHHHHHHhCCCeEEEeCchHHHHHhhhchhhhhcCCCCCccCCCCCCCCCCCCccc
Q 017557 8 EPAIEAIVRDIKPNIVFFDF-TYWLPSLARKLGIKSIAFVTVSPATVGYLLSPERKLRDKFLTEADLLQPPQGFPPSKIK 86 (369)
Q Consensus 8 ~~~l~~~l~~~~pD~vI~D~-~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 86 (369)
...+.+++++.+||+||+|. .+++..+|+++|||++.+....... .. .
T Consensus 103 ~~~l~~~l~~~~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~~~----------------------------~~---~ 151 (391)
T 3tsa_A 103 LPEYLRLAEAWRPSVLLVDVCALIGRVLGGLLDLPVVLHRWGVDPT----------------------------AG---P 151 (391)
T ss_dssp HHHHHHHHHHHCCSEEEEETTCHHHHHHHHHTTCCEEEECCSCCCT----------------------------TT---H
T ss_pred HHHHHHHHHhcCCCEEEeCcchhHHHHHHHHhCCCEEEEecCCccc----------------------------cc---c
Confidence 66778888889999999998 8888999999999999876332110 00 0
Q ss_pred cCccccchhhhhcccCCCchHHHHHHHHhh-----ccCceeeeccccchhhhhhhhhhhhcCcceeEeCCCCCCCCCCCc
Q 017557 87 LRAHEARGLAAATVKDFGGLSFMERLLLCL-----TECDAIGFKTCREIEGAYCDCVESQFEKRVILAGPVLPEPPASVL 161 (369)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~ 161 (369)
+ . ..+. .........+ ...+.++..+.++++... ......+.++ |.. .
T Consensus 152 ~-~---~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~-p~~-------~ 204 (391)
T 3tsa_A 152 F-S---DRAH----------ELLDPVCRHHGLTGLPTPELILDPCPPSLQASD-----APQGAPVQYV-PYN-------G 204 (391)
T ss_dssp H-H---HHHH----------HHHHHHHHHTTSSSSCCCSEEEECSCGGGSCTT-----SCCCEECCCC-CCC-------C
T ss_pred c-c---chHH----------HHHHHHHHHcCCCCCCCCceEEEecChhhcCCC-----CCccCCeeee-cCC-------C
Confidence 0 0 0000 0000001111 112455555554444321 1111223333 111 0
Q ss_pred hhHHHhhhccCCCCceEEEeeCCCcc--CC-HHHHHHHHHHHHhc-CCcEEEEECCCCCCCccccCCchhHHHHhcCCCe
Q 017557 162 EEEFEMLFSSFKAKSLIFCALGSECV--LK-KDQFQELILGFELT-GLPFFAALKPPTGHDTIESALPEGFEERVKGRGF 237 (369)
Q Consensus 162 ~~~~~~~l~~~~~~~~v~vs~GS~~~--~~-~~~~~~~~~~l~~~-~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~~ 237 (369)
+..+..|+...+++++||+++||... .. ...+..++++ ... +++++|+.+... ...+.. ..+|+
T Consensus 205 ~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~~~v~~~~~~~-----~~~l~~------~~~~v 272 (391)
T 3tsa_A 205 SGAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA-TELPGVEAVIAVPPEH-----RALLTD------LPDNA 272 (391)
T ss_dssp CEECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTEEEEEECCGGG-----GGGCTT------CCTTE
T ss_pred CcCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCeEEEEEECCcc-----hhhccc------CCCCE
Confidence 11233577665667899999999854 23 5667888888 766 788888876531 112211 13599
Q ss_pred eEecccChHHhhcCCCccceeecCCCchHHHHHHhCCcccccccccchhHHHHHHhhhcceEEEEee--cCCCCccCHHH
Q 017557 238 VHGGWVQQQLILKHPSVGCFVTHCGSGSLSEAMVNECQLVLLPNVGDQIINSRLMGEDLKVGVEVER--GDEDGLFTRDG 315 (369)
Q Consensus 238 ~v~~~~pq~~lL~~~~~~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~--~~~~~~~~~~~ 315 (369)
++.+|+|+.++|+++++ ||||||.||+.||+++|+|+|++|...||..|+.++++. |+|+.+.. .+ .+++.
T Consensus 273 ~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~-g~g~~~~~~~~~----~~~~~ 345 (391)
T 3tsa_A 273 RIAESVPLNLFLRTCEL--VICAGGSGTAFTATRLGIPQLVLPQYFDQFDYARNLAAA-GAGICLPDEQAQ----SDHEQ 345 (391)
T ss_dssp EECCSCCGGGTGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHT-TSEEECCSHHHH----TCHHH
T ss_pred EEeccCCHHHHHhhCCE--EEeCCCHHHHHHHHHhCCCEEecCCcccHHHHHHHHHHc-CCEEecCccccc----CCHHH
Confidence 99999999999999888 999999999999999999999999999999999999999 99999987 55 78999
Q ss_pred HHHHHHHHhccCCcchHHHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Q 017557 316 VCKAVKAVMDDDSEVGKDARQNHAELREFLISPGLENSYVDGFVQE 361 (369)
Q Consensus 316 l~~ai~~ll~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~v~~ 361 (369)
|.++|+++++ +++++++++++++.+.+.++..+.++.+.+.
T Consensus 346 l~~ai~~ll~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 386 (391)
T 3tsa_A 346 FTDSIATVLG-----DTGFAAAAIKLSDEITAMPHPAALVRTLENT 386 (391)
T ss_dssp HHHHHHHHHT-----CTHHHHHHHHHHHHHHTSCCHHHHHHHHHHC
T ss_pred HHHHHHHHHc-----CHHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 9999999999 7899999999999999777666655555443
No 20
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.93 E-value=2.9e-24 Score=207.50 Aligned_cols=284 Identities=15% Similarity=0.145 Sum_probs=195.6
Q ss_pred HHHHHHHHhhcCCCEEEECC-CCChHHHHHHhCCCeEEEeCchHHHHHhhhchhhhhcCCCCCccCCCCCCCCCCCCccc
Q 017557 8 EPAIEAIVRDIKPNIVFFDF-TYWLPSLARKLGIKSIAFVTVSPATVGYLLSPERKLRDKFLTEADLLQPPQGFPPSKIK 86 (369)
Q Consensus 8 ~~~l~~~l~~~~pD~vI~D~-~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 86 (369)
...+.+++++.+||+||+|. ..++..+|+++|||++.+....... +.
T Consensus 119 ~~~l~~~l~~~~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~~~~----------------------------~~---- 166 (412)
T 3otg_A 119 FDELQPVIERLRPDLVVQEISNYGAGLAALKAGIPTICHGVGRDTP----------------------------DD---- 166 (412)
T ss_dssp HHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHTCCEEEECCSCCCC----------------------------SH----
T ss_pred HHHHHHHHHhcCCCEEEECchhhHHHHHHHHcCCCEEEecccccCc----------------------------hh----
Confidence 36778888888999999998 7778889999999999865332110 00
Q ss_pred cCccccc-hhhhhcccCCCchHHHHHHHHhhccCceeeeccccchhhhhhhhhhhhcCc---ceeEeCCCCCCCCCCCch
Q 017557 87 LRAHEAR-GLAAATVKDFGGLSFMERLLLCLTECDAIGFKTCREIEGAYCDCVESQFEK---RVILAGPVLPEPPASVLE 162 (369)
Q Consensus 87 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~---~~~~vGp~~~~~~~~~~~ 162 (369)
. ...+. .+..... ..+ .... .......++.++..+...++... ..+.. ++.++++- . .
T Consensus 167 ~-~~~~~~~~~~~~~-~~g-~~~~--~~~~~~~~d~~i~~~~~~~~~~~-----~~~~~~~~~~~~~~~~---~-----~ 228 (412)
T 3otg_A 167 L-TRSIEEEVRGLAQ-RLG-LDLP--PGRIDGFGNPFIDIFPPSLQEPE-----FRARPRRHELRPVPFA---E-----Q 228 (412)
T ss_dssp H-HHHHHHHHHHHHH-HTT-CCCC--SSCCGGGGCCEEECSCGGGSCHH-----HHTCTTEEECCCCCCC---C-----C
T ss_pred h-hHHHHHHHHHHHH-HcC-CCCC--cccccCCCCeEEeeCCHHhcCCc-----ccCCCCcceeeccCCC---C-----C
Confidence 0 00000 0000000 000 0000 00001345666666655554321 11111 12222221 1 1
Q ss_pred hHHHhh-hccCCCCceEEEeeCCCccCCHHHHHHHHHHHHhcCCcEEEEECCCCCCCccccCCchhHHHHhcCCCeeEec
Q 017557 163 EEFEML-FSSFKAKSLIFCALGSECVLKKDQFQELILGFELTGLPFFAALKPPTGHDTIESALPEGFEERVKGRGFVHGG 241 (369)
Q Consensus 163 ~~~~~~-l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~ 241 (369)
....+| ....+++++||+++||......+.+.++++++...+.+++|+.+.....+ ....++ +|+.+.+
T Consensus 229 ~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~-~l~~~~---------~~v~~~~ 298 (412)
T 3otg_A 229 GDLPAWLSSRDTARPLVYLTLGTSSGGTVEVLRAAIDGLAGLDADVLVASGPSLDVS-GLGEVP---------ANVRLES 298 (412)
T ss_dssp CCCCGGGGGSCTTSCEEEEECTTTTCSCHHHHHHHHHHHHTSSSEEEEECCSSCCCT-TCCCCC---------TTEEEES
T ss_pred CCCCCccccccCCCCEEEEEcCCCCcCcHHHHHHHHHHHHcCCCEEEEEECCCCChh-hhccCC---------CcEEEeC
Confidence 123345 23335577999999999755677888999999888899999987653111 112233 4899999
Q ss_pred ccChHHhhcCCCccceeecCCCchHHHHHHhCCcccccccccchhHHHHHHhhhcceEEEEeecCCCCccCHHHHHHHHH
Q 017557 242 WVQQQLILKHPSVGCFVTHCGSGSLSEAMVNECQLVLLPNVGDQIINSRLMGEDLKVGVEVERGDEDGLFTRDGVCKAVK 321 (369)
Q Consensus 242 ~~pq~~lL~~~~~~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~~l~~ai~ 321 (369)
|+|+.++|+++++ ||+|||+||++||+++|+|+|++|...||..|+..+++. |+|+.+...+ ++++.|.++|+
T Consensus 299 ~~~~~~~l~~ad~--~v~~~g~~t~~Ea~a~G~P~v~~p~~~~q~~~~~~v~~~-g~g~~~~~~~----~~~~~l~~ai~ 371 (412)
T 3otg_A 299 WVPQAALLPHVDL--VVHHGGSGTTLGALGAGVPQLSFPWAGDSFANAQAVAQA-GAGDHLLPDN----ISPDSVSGAAK 371 (412)
T ss_dssp CCCHHHHGGGCSE--EEESCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHH-TSEEECCGGG----CCHHHHHHHHH
T ss_pred CCCHHHHHhcCcE--EEECCchHHHHHHHHhCCCEEecCCchhHHHHHHHHHHc-CCEEecCccc----CCHHHHHHHHH
Confidence 9999999999999 999999999999999999999999999999999999999 9999999876 89999999999
Q ss_pred HHhccCCcchHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q 017557 322 AVMDDDSEVGKDARQNHAELREFLISPGLENSYVDGFVQELH 363 (369)
Q Consensus 322 ~ll~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~v~~l~ 363 (369)
++++ ++.+++++.+.++.+.+..+..+.++.+.+.+.
T Consensus 372 ~ll~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 408 (412)
T 3otg_A 372 RLLA-----EESYRAGARAVAAEIAAMPGPDEVVRLLPGFAS 408 (412)
T ss_dssp HHHH-----CHHHHHHHHHHHHHHHHSCCHHHHHTTHHHHHC
T ss_pred HHHh-----CHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhc
Confidence 9999 789999999999999877766666655555443
No 21
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.82 E-value=1.5e-19 Score=172.39 Aligned_cols=168 Identities=10% Similarity=0.029 Sum_probs=116.7
Q ss_pred CCCceEEEeeCCCccCCHHHHHHHHHHHH----hcCCcEEEEECCCCCCCccccCCchhHHHHhcCCCeeEecccChH-H
Q 017557 173 KAKSLIFCALGSECVLKKDQFQELILGFE----LTGLPFFAALKPPTGHDTIESALPEGFEERVKGRGFVHGGWVQQQ-L 247 (369)
Q Consensus 173 ~~~~~v~vs~GS~~~~~~~~~~~~~~~l~----~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~-~ 247 (369)
+++++|+|..||.+..... +.+.+++. ..+..++|++|.. ..+.+.+.+. -.+.++.+.+|+++. +
T Consensus 178 ~~~~~ilv~gGs~g~~~~~--~~~~~al~~l~~~~~~~vi~~~G~~-----~~~~~~~~~~--~~~~~~~v~~f~~dm~~ 248 (365)
T 3s2u_A 178 GRRVNLLVLGGSLGAEPLN--KLLPEALAQVPLEIRPAIRHQAGRQ-----HAEITAERYR--TVAVEADVAPFISDMAA 248 (365)
T ss_dssp TSCCEEEECCTTTTCSHHH--HHHHHHHHTSCTTTCCEEEEECCTT-----THHHHHHHHH--HTTCCCEEESCCSCHHH
T ss_pred CCCcEEEEECCcCCccccc--hhhHHHHHhcccccceEEEEecCcc-----ccccccceec--ccccccccccchhhhhh
Confidence 4466999999998864332 23444443 2345677777653 1111111111 124578888999875 6
Q ss_pred hhcCCCccceeecCCCchHHHHHHhCCcccccccc----cchhHHHHHHhhhcceEEEEeecCCCCccCHHHHHHHHHHH
Q 017557 248 ILKHPSVGCFVTHCGSGSLSEAMVNECQLVLLPNV----GDQIINSRLMGEDLKVGVEVERGDEDGLFTRDGVCKAVKAV 323 (369)
Q Consensus 248 lL~~~~~~~~ItHgG~~s~~Eal~~GvP~i~~P~~----~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~~l~~ai~~l 323 (369)
+|+.+++ +|||+|++|+.|++++|+|+|.+|+. .||..||+.+++. |+|+.+...+ ++++.|.++|.++
T Consensus 249 ~l~~aDl--vI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~~-G~a~~l~~~~----~~~~~L~~~i~~l 321 (365)
T 3s2u_A 249 AYAWADL--VICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRS-GAGRLLPQKS----TGAAELAAQLSEV 321 (365)
T ss_dssp HHHHCSE--EEECCCHHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHTT-TSEEECCTTT----CCHHHHHHHHHHH
T ss_pred hhccceE--EEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHHC-CCEEEeecCC----CCHHHHHHHHHHH
Confidence 9999999 99999999999999999999999974 5899999999999 9999999877 9999999999999
Q ss_pred hccCCcchHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Q 017557 324 MDDDSEVGKDARQNHAELREFLISPGLENSYVDGFVQEL 362 (369)
Q Consensus 324 l~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~v~~l 362 (369)
++ |++.++++.+-++.+. .+.+.+.+.+.++++
T Consensus 322 l~-----d~~~~~~m~~~a~~~~-~~~aa~~ia~~i~~l 354 (365)
T 3s2u_A 322 LM-----HPETLRSMADQARSLA-KPEATRTVVDACLEV 354 (365)
T ss_dssp HH-----CTHHHHHHHHHHHHTC-CTTHHHHHHHHHHHH
T ss_pred HC-----CHHHHHHHHHHHHhcC-CccHHHHHHHHHHHH
Confidence 98 4444444333333333 233444454444444
No 22
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.62 E-value=1.3e-15 Score=134.04 Aligned_cols=135 Identities=10% Similarity=0.043 Sum_probs=96.6
Q ss_pred ccCCCCceEEEeeCCCccCCHHHHHHH-----HHHHHhcC-CcEEEEECCCCCCCccccCCchhHHHHh-----------
Q 017557 170 SSFKAKSLIFCALGSECVLKKDQFQEL-----ILGFELTG-LPFFAALKPPTGHDTIESALPEGFEERV----------- 232 (369)
Q Consensus 170 ~~~~~~~~v~vs~GS~~~~~~~~~~~~-----~~~l~~~~-~~~i~~~~~~~~~~~~~~~lp~~~~~~~----------- 232 (369)
...+++++|||++||... -.+.+..+ +++|...+ .++++++|.... .....+....
T Consensus 23 ~~~~~~~~VlVtgGS~~~-~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~------~~~~~~~~~~~~~~~~~l~p~ 95 (224)
T 2jzc_A 23 EGIIEEKALFVTCGATVP-FPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYS------SEFEHLVQERGGQRESQKIPI 95 (224)
T ss_dssp -CCCCSCCEEEECCSCCS-CHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSC------CCCCSHHHHHTCEECSCCCSS
T ss_pred CCCCCCCEEEEEcCCchH-HHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCch------hhHHHHHHhhhcccccccccc
Confidence 333457799999999842 23333433 47787766 789999987532 0111111111
Q ss_pred ----------------cCCCeeEecccChH-Hhhc-CCCccceeecCCCchHHHHHHhCCcccccccc----cchhHHHH
Q 017557 233 ----------------KGRGFVHGGWVQQQ-LILK-HPSVGCFVTHCGSGSLSEAMVNECQLVLLPNV----GDQIINSR 290 (369)
Q Consensus 233 ----------------~~~~~~v~~~~pq~-~lL~-~~~~~~~ItHgG~~s~~Eal~~GvP~i~~P~~----~DQ~~na~ 290 (369)
..-++.+.+|+++. .+|+ .+++ +|||||+||++|++++|+|+|++|.. .||..||+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~ 173 (224)
T 2jzc_A 96 DQFGCGDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIAD 173 (224)
T ss_dssp CTTCTTCSCEEEESTTTSSEEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHH
T ss_pred ccccccccccccccccCCceEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHH
Confidence 01245677888775 7999 9999 99999999999999999999999984 47999999
Q ss_pred HHhhhcceEEEEeecCCCCccCHHHHHHHHHHH
Q 017557 291 LMGEDLKVGVEVERGDEDGLFTRDGVCKAVKAV 323 (369)
Q Consensus 291 ~v~~~~g~G~~l~~~~~~~~~~~~~l~~ai~~l 323 (369)
++++. |+++.++ .+.|.++|+++
T Consensus 174 ~l~~~-G~~~~~~---------~~~L~~~i~~l 196 (224)
T 2jzc_A 174 KFVEL-GYVWSCA---------PTETGLIAGLR 196 (224)
T ss_dssp HHHHH-SCCCEEC---------SCTTTHHHHHH
T ss_pred HHHHC-CCEEEcC---------HHHHHHHHHHH
Confidence 99999 9997662 34667777666
No 23
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.56 E-value=1.1e-13 Score=130.86 Aligned_cols=166 Identities=11% Similarity=0.086 Sum_probs=114.9
Q ss_pred CCCceEEEeeCCCccCCHHHHHHHHHHHHhc--CCcEEEEECCCCCCCccccCCchhHHHHh---cCCCeeEecccCh-H
Q 017557 173 KAKSLIFCALGSECVLKKDQFQELILGFELT--GLPFFAALKPPTGHDTIESALPEGFEERV---KGRGFVHGGWVQQ-Q 246 (369)
Q Consensus 173 ~~~~~v~vs~GS~~~~~~~~~~~~~~~l~~~--~~~~i~~~~~~~~~~~~~~~lp~~~~~~~---~~~~~~v~~~~pq-~ 246 (369)
+++++|++..|+... ......+++++... +.++++++|.+. .+.+.+.. .-.++.+.+|+++ .
T Consensus 181 ~~~~~il~~~g~~~~--~k~~~~li~a~~~l~~~~~~l~i~G~~~---------~~~l~~~~~~~~~~~v~~~g~~~~~~ 249 (364)
T 1f0k_A 181 EGPVRVLVVGGSQGA--RILNQTMPQVAAKLGDSVTIWHQSGKGS---------QQSVEQAYAEAGQPQHKVTEFIDDMA 249 (364)
T ss_dssp CSSEEEEEECTTTCC--HHHHHHHHHHHHHHGGGEEEEEECCTTC---------HHHHHHHHHHTTCTTSEEESCCSCHH
T ss_pred CCCcEEEEEcCchHh--HHHHHHHHHHHHHhcCCcEEEEEcCCch---------HHHHHHHHhhcCCCceEEecchhhHH
Confidence 345578888888753 33334455555432 566677776541 12333222 1247999999954 6
Q ss_pred HhhcCCCccceeecCCCchHHHHHHhCCcccccccc---cchhHHHHHHhhhcceEEEEeecCCCCccCHHHHHHHHHHH
Q 017557 247 LILKHPSVGCFVTHCGSGSLSEAMVNECQLVLLPNV---GDQIINSRLMGEDLKVGVEVERGDEDGLFTRDGVCKAVKAV 323 (369)
Q Consensus 247 ~lL~~~~~~~~ItHgG~~s~~Eal~~GvP~i~~P~~---~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~~l~~ai~~l 323 (369)
.+++.+++ ||+++|.+++.||+++|+|+|+.|.. .||..|++.+.+. |.|+.++..+ .+.+.+.++|.++
T Consensus 250 ~~~~~ad~--~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~-g~g~~~~~~d----~~~~~la~~i~~l 322 (364)
T 1f0k_A 250 AAYAWADV--VVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKA-GAAKIIEQPQ----LSVDAVANTLAGW 322 (364)
T ss_dssp HHHHHCSE--EEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHT-TSEEECCGGG----CCHHHHHHHHHTC
T ss_pred HHHHhCCE--EEECCchHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhC-CcEEEecccc----CCHHHHHHHHHhc
Confidence 79999999 99999988999999999999999987 7999999999999 9999998765 7799999999988
Q ss_pred hccCCcchHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q 017557 324 MDDDSEVGKDARQNHAELREFLISPGLENSYVDGFVQELH 363 (369)
Q Consensus 324 l~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~v~~l~ 363 (369)
+ +..++++.+-+....+..+.++.++.+.+.+.
T Consensus 323 -~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ 355 (364)
T 1f0k_A 323 -S------RETLLTMAERARAASIPDATERVANEVSRVAR 355 (364)
T ss_dssp -C------HHHHHHHHHHHHHTCCTTHHHHHHHHHHHHHT
T ss_pred -C------HHHHHHHHHHHHHhhccCHHHHHHHHHHHHHH
Confidence 5 33444444433444433333444455544443
No 24
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.19 E-value=3e-10 Score=103.69 Aligned_cols=118 Identities=9% Similarity=0.019 Sum_probs=90.8
Q ss_pred CCceEEEeeCCCccCCHHHHHHHHHHHHhcCCcEEEEECCCCCCCccccCCchhHHHHh-cCCCeeEecccChH-HhhcC
Q 017557 174 AKSLIFCALGSECVLKKDQFQELILGFELTGLPFFAALKPPTGHDTIESALPEGFEERV-KGRGFVHGGWVQQQ-LILKH 251 (369)
Q Consensus 174 ~~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~-~~~~~~v~~~~pq~-~lL~~ 251 (369)
+.+.|+|++|..... ....+++++|.... ++.++.+.+. ...+.+.+.. ..+|+.+.+|+++. ++++.
T Consensus 156 ~~~~ILv~~GG~d~~--~l~~~vl~~L~~~~-~i~vv~G~~~-------~~~~~l~~~~~~~~~v~v~~~~~~m~~~m~~ 225 (282)
T 3hbm_A 156 KKYDFFICMGGTDIK--NLSLQIASELPKTK-IISIATSSSN-------PNLKKLQKFAKLHNNIRLFIDHENIAKLMNE 225 (282)
T ss_dssp CCEEEEEECCSCCTT--CHHHHHHHHSCTTS-CEEEEECTTC-------TTHHHHHHHHHTCSSEEEEESCSCHHHHHHT
T ss_pred cCCeEEEEECCCchh--hHHHHHHHHhhcCC-CEEEEECCCc-------hHHHHHHHHHhhCCCEEEEeCHHHHHHHHHH
Confidence 346899999976533 34556777775433 6777777652 1222333322 23589999999876 59999
Q ss_pred CCccceeecCCCchHHHHHHhCCcccccccccchhHHHHHHhhhcceEEEEeec
Q 017557 252 PSVGCFVTHCGSGSLSEAMVNECQLVLLPNVGDQIINSRLMGEDLKVGVEVERG 305 (369)
Q Consensus 252 ~~~~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~ 305 (369)
+++ +||+|| +|++|+++.|+|+|.+|...+|..||+.+++. |+++.+..-
T Consensus 226 aDl--vI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~~~-G~~~~~~~~ 275 (282)
T 3hbm_A 226 SNK--LIISAS-SLVNEALLLKANFKAICYVKNQESTATWLAKK-GYEVEYKYL 275 (282)
T ss_dssp EEE--EEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHHHT-TCEEECGGG
T ss_pred CCE--EEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHC-CCEEEcchh
Confidence 999 999999 89999999999999999999999999999999 999998753
No 25
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=98.96 E-value=1.3e-09 Score=104.60 Aligned_cols=139 Identities=12% Similarity=0.107 Sum_probs=86.9
Q ss_pred CCceEEEeeCCCccCCHHHHHHHHHHHHh-----cCCcEEEEECCCCCCCccccCCchhHHHHh-cCCCeeEecccC---
Q 017557 174 AKSLIFCALGSECVLKKDQFQELILGFEL-----TGLPFFAALKPPTGHDTIESALPEGFEERV-KGRGFVHGGWVQ--- 244 (369)
Q Consensus 174 ~~~~v~vs~GS~~~~~~~~~~~~~~~l~~-----~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~-~~~~~~v~~~~p--- 244 (369)
++++|+++.+-...... .+..+++++.. .+.++++..+.+ ..+-+.+.+.. ..+++.+.++++
T Consensus 229 ~~~~vlv~~hR~~~~~~-~~~~ll~A~~~l~~~~~~~~~v~~~g~~-------~~~~~~l~~~~~~~~~v~~~~~lg~~~ 300 (396)
T 3dzc_A 229 SKKLILVTGHRRESFGG-GFERICQALITTAEQHPECQILYPVHLN-------PNVREPVNKLLKGVSNIVLIEPQQYLP 300 (396)
T ss_dssp TSEEEEEECSCBCCCTT-HHHHHHHHHHHHHHHCTTEEEEEECCBC-------HHHHHHHHHHTTTCTTEEEECCCCHHH
T ss_pred CCCEEEEEECCcccchh-HHHHHHHHHHHHHHhCCCceEEEEeCCC-------hHHHHHHHHHHcCCCCEEEeCCCCHHH
Confidence 45677776532222222 24556666542 356677665432 00111122221 235888877764
Q ss_pred hHHhhcCCCccceeecCCCchHHHHHHhCCcccccccccchhHHHHHHhhhcceEEEEeecCCCCccCHHHHHHHHHHHh
Q 017557 245 QQLILKHPSVGCFVTHCGSGSLSEAMVNECQLVLLPNVGDQIINSRLMGEDLKVGVEVERGDEDGLFTRDGVCKAVKAVM 324 (369)
Q Consensus 245 q~~lL~~~~~~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~~l~~ai~~ll 324 (369)
...+++.+++ +|+-+| |.+.||.++|+|+|+..-..+++ .+.+. |.++.+. .+++.|.+++.+++
T Consensus 301 ~~~l~~~ad~--vv~~SG-g~~~EA~a~G~PvV~~~~~~~~~----e~v~~-G~~~lv~-------~d~~~l~~ai~~ll 365 (396)
T 3dzc_A 301 FVYLMDRAHI--ILTDSG-GIQEEAPSLGKPVLVMRETTERP----EAVAA-GTVKLVG-------TNQQQICDALSLLL 365 (396)
T ss_dssp HHHHHHHCSE--EEESCS-GGGTTGGGGTCCEEECCSSCSCH----HHHHH-TSEEECT-------TCHHHHHHHHHHHH
T ss_pred HHHHHHhcCE--EEECCc-cHHHHHHHcCCCEEEccCCCcch----HHHHc-CceEEcC-------CCHHHHHHHHHHHH
Confidence 4568899999 999997 55579999999999975545543 24567 8886553 25899999999999
Q ss_pred ccCCcchHHHHHHHHH
Q 017557 325 DDDSEVGKDARQNHAE 340 (369)
Q Consensus 325 ~~~~~~~~~~~~~a~~ 340 (369)
+ ++..++++.+
T Consensus 366 ~-----d~~~~~~m~~ 376 (396)
T 3dzc_A 366 T-----DPQAYQAMSQ 376 (396)
T ss_dssp H-----CHHHHHHHHT
T ss_pred c-----CHHHHHHHhh
Confidence 8 6666655443
No 26
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=98.90 E-value=1.3e-08 Score=96.20 Aligned_cols=137 Identities=15% Similarity=0.158 Sum_probs=87.3
Q ss_pred CceEEEeeCCCccCCHHHHHHHHHHHHh-----cCCcEEEEECCCCCCCccccCCchhHHHHhc-CCCeeEecccCh---
Q 017557 175 KSLIFCALGSECVLKKDQFQELILGFEL-----TGLPFFAALKPPTGHDTIESALPEGFEERVK-GRGFVHGGWVQQ--- 245 (369)
Q Consensus 175 ~~~v~vs~GS~~~~~~~~~~~~~~~l~~-----~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~-~~~~~v~~~~pq--- 245 (369)
+++|+++.|...... .+..+++++.. .+..+++..+.+ . .+-+.+.+... .+++.+.++++.
T Consensus 198 ~~~vl~~~gr~~~~k--~~~~ll~a~~~l~~~~~~~~lv~~~g~~-----~--~~~~~l~~~~~~~~~v~~~g~~g~~~~ 268 (376)
T 1v4v_A 198 GPYVTVTMHRRENWP--LLSDLAQALKRVAEAFPHLTFVYPVHLN-----P--VVREAVFPVLKGVRNFVLLDPLEYGSM 268 (376)
T ss_dssp SCEEEECCCCGGGGG--GHHHHHHHHHHHHHHCTTSEEEEECCSC-----H--HHHHHHHHHHTTCTTEEEECCCCHHHH
T ss_pred CCEEEEEeCcccchH--HHHHHHHHHHHHHhhCCCeEEEEECCCC-----H--HHHHHHHHHhccCCCEEEECCCCHHHH
Confidence 457777777553221 24445555432 245666554532 0 01112222222 358888855554
Q ss_pred HHhhcCCCccceeecCCCchHHHHHHhCCcccccccccchhHHHHHHhhhcceEEEEeecCCCCccCHHHHHHHHHHHhc
Q 017557 246 QLILKHPSVGCFVTHCGSGSLSEAMVNECQLVLLPNVGDQIINSRLMGEDLKVGVEVERGDEDGLFTRDGVCKAVKAVMD 325 (369)
Q Consensus 246 ~~lL~~~~~~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~~l~~ai~~ll~ 325 (369)
..+++.+++ ||+++| |.+.||+++|+|+|+.+..+++.. +.+. |.|+.+. .+++.|.++|.++++
T Consensus 269 ~~~~~~ad~--~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~----~~~~-g~g~lv~-------~d~~~la~~i~~ll~ 333 (376)
T 1v4v_A 269 AALMRASLL--LVTDSG-GLQEEGAALGVPVVVLRNVTERPE----GLKA-GILKLAG-------TDPEGVYRVVKGLLE 333 (376)
T ss_dssp HHHHHTEEE--EEESCH-HHHHHHHHTTCCEEECSSSCSCHH----HHHH-TSEEECC-------SCHHHHHHHHHHHHT
T ss_pred HHHHHhCcE--EEECCc-CHHHHHHHcCCCEEeccCCCcchh----hhcC-CceEECC-------CCHHHHHHHHHHHHh
Confidence 579999999 999884 445699999999999886666555 3466 8888774 268999999999998
Q ss_pred cCCcchHHHHHHHHH
Q 017557 326 DDSEVGKDARQNHAE 340 (369)
Q Consensus 326 ~~~~~~~~~~~~a~~ 340 (369)
++..+++..+
T Consensus 334 -----d~~~~~~~~~ 343 (376)
T 1v4v_A 334 -----NPEELSRMRK 343 (376)
T ss_dssp -----CHHHHHHHHH
T ss_pred -----ChHhhhhhcc
Confidence 5655555443
No 27
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=98.90 E-value=2.7e-09 Score=102.64 Aligned_cols=140 Identities=12% Similarity=0.064 Sum_probs=88.0
Q ss_pred CCCceEEEeeCCCccCCHHHHHHHHHHHHh-----cCCcEEEEECCCCCCCccccCCchhHHHHh-cCCCeeEecccCh-
Q 017557 173 KAKSLIFCALGSECVLKKDQFQELILGFEL-----TGLPFFAALKPPTGHDTIESALPEGFEERV-KGRGFVHGGWVQQ- 245 (369)
Q Consensus 173 ~~~~~v~vs~GS~~~~~~~~~~~~~~~l~~-----~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~-~~~~~~v~~~~pq- 245 (369)
+++++++++.|....... .+..+++++.. .+.++++..+.+ . .+-+.+.+.. ..+++++.+++++
T Consensus 222 ~~~~~vlv~~~r~~~~~~-~l~~ll~a~~~l~~~~~~~~~v~~~~~~------~-~~~~~l~~~~~~~~~v~l~~~l~~~ 293 (403)
T 3ot5_A 222 GDNRLILMTAHRRENLGE-PMQGMFEAVREIVESREDTELVYPMHLN------P-AVREKAMAILGGHERIHLIEPLDAI 293 (403)
T ss_dssp TTCEEEEECCCCHHHHTT-HHHHHHHHHHHHHHHCTTEEEEEECCSC------H-HHHHHHHHHHTTCTTEEEECCCCHH
T ss_pred cCCCEEEEEeCcccccCc-HHHHHHHHHHHHHHhCCCceEEEecCCC------H-HHHHHHHHHhCCCCCEEEeCCCCHH
Confidence 345577777654222111 23455555432 356677765432 0 0111122212 2358999898863
Q ss_pred --HHhhcCCCccceeecCCCchHHHHHHhCCcccccccccchhHHHHHHhhhcceEEEEeecCCCCccCHHHHHHHHHHH
Q 017557 246 --QLILKHPSVGCFVTHCGSGSLSEAMVNECQLVLLPNVGDQIINSRLMGEDLKVGVEVERGDEDGLFTRDGVCKAVKAV 323 (369)
Q Consensus 246 --~~lL~~~~~~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~~l~~ai~~l 323 (369)
..+++++++ +|+.+|.. ..||.++|+|+|+.|-..+++. +.+. |.|+.+. .+++.|.+++.++
T Consensus 294 ~~~~l~~~ad~--vv~~SGg~-~~EA~a~g~PvV~~~~~~~~~e----~v~~-g~~~lv~-------~d~~~l~~ai~~l 358 (403)
T 3ot5_A 294 DFHNFLRKSYL--VFTDSGGV-QEEAPGMGVPVLVLRDTTERPE----GIEA-GTLKLIG-------TNKENLIKEALDL 358 (403)
T ss_dssp HHHHHHHHEEE--EEECCHHH-HHHGGGTTCCEEECCSSCSCHH----HHHH-TSEEECC-------SCHHHHHHHHHHH
T ss_pred HHHHHHHhcCE--EEECCccH-HHHHHHhCCCEEEecCCCcchh----heeC-CcEEEcC-------CCHHHHHHHHHHH
Confidence 458889998 99987532 2699999999999976665543 3467 9887764 3688999999999
Q ss_pred hccCCcchHHHHHHHHH
Q 017557 324 MDDDSEVGKDARQNHAE 340 (369)
Q Consensus 324 l~~~~~~~~~~~~~a~~ 340 (369)
+. ++..++++.+
T Consensus 359 l~-----~~~~~~~m~~ 370 (403)
T 3ot5_A 359 LD-----NKESHDKMAQ 370 (403)
T ss_dssp HH-----CHHHHHHHHH
T ss_pred Hc-----CHHHHHHHHh
Confidence 98 6666655543
No 28
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=98.89 E-value=6.8e-07 Score=84.46 Aligned_cols=276 Identities=12% Similarity=0.036 Sum_probs=149.2
Q ss_pred cHHHHHHHHhhcCCCEEEECC-C--CChHHHHHHhCCCeEEEeCch-HHHHHhhhchhhhhcCCCCCccCCCCCCCCCCC
Q 017557 7 TEPAIEAIVRDIKPNIVFFDF-T--YWLPSLARKLGIKSIAFVTVS-PATVGYLLSPERKLRDKFLTEADLLQPPQGFPP 82 (369)
Q Consensus 7 ~~~~l~~~l~~~~pD~vI~D~-~--~~~~~~A~~lgiP~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 82 (369)
....+.+++++.+||+|++.. . .+...+++++|+|.+.+.... .... ..
T Consensus 74 ~~~~l~~~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~--------------------------~~- 126 (394)
T 3okp_A 74 TAHAMAEIIREREIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVGW--------------------------SM- 126 (394)
T ss_dssp HHHHHHHHHHHTTCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHHH--------------------------TT-
T ss_pred hHHHHHHHHHhcCCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhhh--------------------------hh-
Confidence 345778888889999999875 3 345667899999955533221 1100 00
Q ss_pred CccccCccccchhhhhcccCCCchHHHHHHHHhhccCceeeeccccchhhhhhhhhhhhc--CcceeEeCCCCCCCCCCC
Q 017557 83 SKIKLRAHEARGLAAATVKDFGGLSFMERLLLCLTECDAIGFKTCREIEGAYCDCVESQF--EKRVILAGPVLPEPPASV 160 (369)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~--~~~~~~vGp~~~~~~~~~ 160 (369)
. + . .. ......++.+|.+++.|....+. ..+.+ ..++..|..-.......+
T Consensus 127 ----~-----~-~----------~~--~~~~~~~~~~d~ii~~s~~~~~~-----~~~~~~~~~~~~vi~ngv~~~~~~~ 179 (394)
T 3okp_A 127 ----L-----P-G----------SR--QSLRKIGTEVDVLTYISQYTLRR-----FKSAFGSHPTFEHLPSGVDVKRFTP 179 (394)
T ss_dssp ----S-----H-H----------HH--HHHHHHHHHCSEEEESCHHHHHH-----HHHHHCSSSEEEECCCCBCTTTSCC
T ss_pred ----c-----c-h----------hh--HHHHHHHHhCCEEEEcCHHHHHH-----HHHhcCCCCCeEEecCCcCHHHcCC
Confidence 0 0 0 00 01123345688888777543221 11222 246666664443221111
Q ss_pred -c---hhHHHhhhccCCCCceEEEeeCCCcc-CCHHHHHHHHHHHHh--cCCcEEEEECCCCCCCccccCCchhHHHHh-
Q 017557 161 -L---EEEFEMLFSSFKAKSLIFCALGSECV-LKKDQFQELILGFEL--TGLPFFAALKPPTGHDTIESALPEGFEERV- 232 (369)
Q Consensus 161 -~---~~~~~~~l~~~~~~~~v~vs~GS~~~-~~~~~~~~~~~~l~~--~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~- 232 (369)
. ...+.+-+... ++..+++..|+... ...+.+-+.+..+.. .+.+++++ |.+ ...+.+.+..
T Consensus 180 ~~~~~~~~~~~~~~~~-~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~-G~g--------~~~~~l~~~~~ 249 (394)
T 3okp_A 180 ATPEDKSATRKKLGFT-DTTPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLIV-GSG--------RYESTLRRLAT 249 (394)
T ss_dssp CCHHHHHHHHHHTTCC-TTCCEEEEESCSCGGGCHHHHHHHHHHHHHHSTTCEEEEE-CCC--------TTHHHHHHHTG
T ss_pred CCchhhHHHHHhcCCC-cCceEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEE-cCc--------hHHHHHHHHHh
Confidence 1 12333333322 23366777788653 223344444444433 35555554 332 1111222221
Q ss_pred -cCCCeeEecccChHH---hhcCCCccceee-----------cCCCchHHHHHHhCCcccccccccchhHHHHHHhhhcc
Q 017557 233 -KGRGFVHGGWVQQQL---ILKHPSVGCFVT-----------HCGSGSLSEAMVNECQLVLLPNVGDQIINSRLMGEDLK 297 (369)
Q Consensus 233 -~~~~~~v~~~~pq~~---lL~~~~~~~~It-----------HgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g 297 (369)
...++.+.+|+|+.+ +++.+++ +|. -|..+++.||+++|+|+|+.+..+- .. +... |
T Consensus 250 ~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~~----~e-~i~~-~ 321 (394)
T 3okp_A 250 DVSQNVKFLGRLEYQDMINTLAAADI--FAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGGA----PE-TVTP-A 321 (394)
T ss_dssp GGGGGEEEEESCCHHHHHHHHHHCSE--EEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSSTTG----GG-GCCT-T
T ss_pred cccCeEEEcCCCCHHHHHHHHHhCCE--EEecCccccccccccccCcHHHHHHHcCCCEEEeCCCCh----HH-HHhc-C
Confidence 135899999997654 7888999 665 4455789999999999999775321 11 2234 6
Q ss_pred eEEEEeecCCCCccCHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHh
Q 017557 298 VGVEVERGDEDGLFTRDGVCKAVKAVMDDDSEVGKDARQNHAELREFLISPGLENSYVDGFVQELHS 364 (369)
Q Consensus 298 ~G~~l~~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~v~~l~~ 364 (369)
.|+.++. -+.+++.++|.+++++ .+....+.+++++. +++.-+.....+.+.+.+.+
T Consensus 322 ~g~~~~~------~d~~~l~~~i~~l~~~-~~~~~~~~~~~~~~---~~~~~s~~~~~~~~~~~~~~ 378 (394)
T 3okp_A 322 TGLVVEG------SDVDKLSELLIELLDD-PIRRAAMGAAGRAH---VEAEWSWEIMGERLTNILQS 378 (394)
T ss_dssp TEEECCT------TCHHHHHHHHHHHHTC-HHHHHHHHHHHHHH---HHHHTBHHHHHHHHHHHHHS
T ss_pred CceEeCC------CCHHHHHHHHHHHHhC-HHHHHHHHHHHHHH---HHHhCCHHHHHHHHHHHHHH
Confidence 7877765 3689999999999982 11122333344333 33223445555555555544
No 29
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=98.86 E-value=5.9e-09 Score=98.81 Aligned_cols=137 Identities=9% Similarity=0.101 Sum_probs=87.0
Q ss_pred CCceEEEeeCCCccCCHHHHHHHHHHHH---h--cCCcEEEEECCCCCCCccccCCchhHHHHhc-CCCeeEecccCh--
Q 017557 174 AKSLIFCALGSECVLKKDQFQELILGFE---L--TGLPFFAALKPPTGHDTIESALPEGFEERVK-GRGFVHGGWVQQ-- 245 (369)
Q Consensus 174 ~~~~v~vs~GS~~~~~~~~~~~~~~~l~---~--~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~-~~~~~v~~~~pq-- 245 (369)
++++++++.|......+ .+..+++++. . .+.++++..+.+ ..+-+.+.+... .+++.+.++++.
T Consensus 204 ~~~~vl~~~gr~~~~~k-g~~~li~a~~~l~~~~~~~~l~i~~g~~-------~~~~~~l~~~~~~~~~v~~~g~~~~~~ 275 (384)
T 1vgv_A 204 DKKMILVTGHRRESFGR-GFEEICHALADIATTHQDIQIVYPVHLN-------PNVREPVNRILGHVKNVILIDPQEYLP 275 (384)
T ss_dssp TSEEEEEECCCBSSCCH-HHHHHHHHHHHHHHHCTTEEEEEECCBC-------HHHHHHHHHHHTTCTTEEEECCCCHHH
T ss_pred CCCEEEEEeCCccccch-HHHHHHHHHHHHHhhCCCeEEEEEcCCC-------HHHHHHHHHHhhcCCCEEEeCCCCHHH
Confidence 35578888887653322 2344555543 2 245555543321 001112222222 358888666654
Q ss_pred -HHhhcCCCccceeecCCCchHHHHHHhCCcccccccccchhHHHHHHhhhcceEEEEeecCCCCccCHHHHHHHHHHHh
Q 017557 246 -QLILKHPSVGCFVTHCGSGSLSEAMVNECQLVLLPNVGDQIINSRLMGEDLKVGVEVERGDEDGLFTRDGVCKAVKAVM 324 (369)
Q Consensus 246 -~~lL~~~~~~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~~l~~ai~~ll 324 (369)
..+++.+++ ||+.+|. .+.||+++|+|+|+.+..++.. .+.+. |.|+.++. +.+++.++|.+++
T Consensus 276 ~~~~~~~ad~--~v~~Sg~-~~lEA~a~G~PvI~~~~~~~~~----e~v~~-g~g~lv~~-------d~~~la~~i~~ll 340 (384)
T 1vgv_A 276 FVWLMNHAWL--ILTDSGG-IQEEAPSLGKPVLVMRDTTERP----EAVTA-GTVRLVGT-------DKQRIVEEVTRLL 340 (384)
T ss_dssp HHHHHHHCSE--EEESSST-GGGTGGGGTCCEEEESSCCSCH----HHHHH-TSEEEECS-------SHHHHHHHHHHHH
T ss_pred HHHHHHhCcE--EEECCcc-hHHHHHHcCCCEEEccCCCCcc----hhhhC-CceEEeCC-------CHHHHHHHHHHHH
Confidence 568999999 9999864 4889999999999998744432 34567 88988853 5789999999999
Q ss_pred ccCCcchHHHHHHH
Q 017557 325 DDDSEVGKDARQNH 338 (369)
Q Consensus 325 ~~~~~~~~~~~~~a 338 (369)
+ ++..+++.
T Consensus 341 ~-----d~~~~~~~ 349 (384)
T 1vgv_A 341 K-----DENEYQAM 349 (384)
T ss_dssp H-----CHHHHHHH
T ss_pred h-----ChHHHhhh
Confidence 8 55544443
No 30
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=98.84 E-value=1e-08 Score=97.91 Aligned_cols=127 Identities=12% Similarity=0.118 Sum_probs=82.4
Q ss_pred CceEEEeeCCCccCCH-HHHHHHHHHHHhc----CCcEEEEECCCCCCCccccCCchhHHHH---h-cCCCeeEecccC-
Q 017557 175 KSLIFCALGSECVLKK-DQFQELILGFELT----GLPFFAALKPPTGHDTIESALPEGFEER---V-KGRGFVHGGWVQ- 244 (369)
Q Consensus 175 ~~~v~vs~GS~~~~~~-~~~~~~~~~l~~~----~~~~i~~~~~~~~~~~~~~~lp~~~~~~---~-~~~~~~v~~~~p- 244 (369)
++.+++++|....... +.+..+++++... +.++|+..++. +.+.+.+. . ..+|+++.+.++
T Consensus 203 ~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p~---------~~~~l~~~~~~~~~~~~v~l~~~lg~ 273 (385)
T 4hwg_A 203 KQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHPR---------TKKRLEDLEGFKELGDKIRFLPAFSF 273 (385)
T ss_dssp TSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECHH---------HHHHHHTSGGGGGTGGGEEECCCCCH
T ss_pred CCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECChH---------HHHHHHHHHHHhcCCCCEEEEcCCCH
Confidence 5688888887643332 4466677776432 67777765421 00111111 1 124787765554
Q ss_pred --hHHhhcCCCccceeecCCCchHHHHHHhCCcccccccccchhHHHHHHhhhcceEEEEeecCCCCccCHHHHHHHHHH
Q 017557 245 --QQLILKHPSVGCFVTHCGSGSLSEAMVNECQLVLLPNVGDQIINSRLMGEDLKVGVEVERGDEDGLFTRDGVCKAVKA 322 (369)
Q Consensus 245 --q~~lL~~~~~~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~~l~~ai~~ 322 (369)
...+++++++ +||-.|. .+.||.+.|+|+|.++-..+.+. ..+. |.++.+. .+.+.|.+++.+
T Consensus 274 ~~~~~l~~~adl--vvt~SGg-v~~EA~alG~Pvv~~~~~ter~e----~v~~-G~~~lv~-------~d~~~i~~ai~~ 338 (385)
T 4hwg_A 274 TDYVKLQMNAFC--ILSDSGT-ITEEASILNLPALNIREAHERPE----GMDA-GTLIMSG-------FKAERVLQAVKT 338 (385)
T ss_dssp HHHHHHHHHCSE--EEECCTT-HHHHHHHTTCCEEECSSSCSCTH----HHHH-TCCEECC-------SSHHHHHHHHHH
T ss_pred HHHHHHHHhCcE--EEECCcc-HHHHHHHcCCCEEEcCCCccchh----hhhc-CceEEcC-------CCHHHHHHHHHH
Confidence 4568999999 9999886 46899999999999987543222 2567 8877663 368899999999
Q ss_pred Hhc
Q 017557 323 VMD 325 (369)
Q Consensus 323 ll~ 325 (369)
+++
T Consensus 339 ll~ 341 (385)
T 4hwg_A 339 ITE 341 (385)
T ss_dssp HHT
T ss_pred HHh
Confidence 997
No 31
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=98.66 E-value=2.4e-06 Score=82.17 Aligned_cols=97 Identities=10% Similarity=0.051 Sum_probs=69.9
Q ss_pred CCCeeEecccChH---HhhcCCCccceeecC---C-CchHHHHHHhCCcccccccccchhHHHHHHhhhcceEEEEeecC
Q 017557 234 GRGFVHGGWVQQQ---LILKHPSVGCFVTHC---G-SGSLSEAMVNECQLVLLPNVGDQIINSRLMGEDLKVGVEVERGD 306 (369)
Q Consensus 234 ~~~~~v~~~~pq~---~lL~~~~~~~~ItHg---G-~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~ 306 (369)
.+++.+.+|+|+. .+++.+++ +|.-. | .+++.||+++|+|+|+.+. ......+.+. +.|+.++.
T Consensus 305 ~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~~-~~g~~~~~-- 375 (438)
T 3c48_A 305 EKRIRFLDPRPPSELVAVYRAADI--VAVPSFNESFGLVAMEAQASGTPVIAARV----GGLPIAVAEG-ETGLLVDG-- 375 (438)
T ss_dssp TTTEEEECCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHHTTCCEEEESC----TTHHHHSCBT-TTEEEESS--
T ss_pred CCcEEEcCCCChHHHHHHHHhCCE--EEECccccCCchHHHHHHHcCCCEEecCC----CChhHHhhCC-CcEEECCC--
Confidence 4689999999864 58889998 66543 2 4589999999999999753 4455666666 78988875
Q ss_pred CCCccCHHHHHHHHHHHhccCCcchHHHHHHHHHHHHH
Q 017557 307 EDGLFTRDGVCKAVKAVMDDDSEVGKDARQNHAELREF 344 (369)
Q Consensus 307 ~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~a~~l~~~ 344 (369)
-+.+++.++|.+++++ .+....+.+++++..+.
T Consensus 376 ----~d~~~la~~i~~l~~~-~~~~~~~~~~~~~~~~~ 408 (438)
T 3c48_A 376 ----HSPHAWADALATLLDD-DETRIRMGEDAVEHART 408 (438)
T ss_dssp ----CCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHH
T ss_pred ----CCHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHh
Confidence 3689999999999982 22223445555555444
No 32
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=98.65 E-value=2.9e-06 Score=80.48 Aligned_cols=182 Identities=10% Similarity=0.014 Sum_probs=99.3
Q ss_pred hccCceeeeccccchhhhhhhhhhhhc--CcceeEeCCCCCCCCCCC-chhHHHhhhccCCCCceEEEeeCCCcc-CCHH
Q 017557 116 LTECDAIGFKTCREIEGAYCDCVESQF--EKRVILAGPVLPEPPASV-LEEEFEMLFSSFKAKSLIFCALGSECV-LKKD 191 (369)
Q Consensus 116 ~~~~~~~l~~s~~~l~~~~~~~~~~~~--~~~~~~vGp~~~~~~~~~-~~~~~~~~l~~~~~~~~v~vs~GS~~~-~~~~ 191 (369)
++.+|.+++.|....+. ..+.+ +.++..|..-.......+ ....+.+-+...+ +..+++..|.... ...+
T Consensus 154 ~~~ad~ii~~s~~~~~~-----~~~~~~~~~~~~vi~ngv~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~G~~~~~Kg~~ 227 (394)
T 2jjm_A 154 IEQSDVVTAVSHSLINE-----THELVKPNKDIQTVYNFIDERVYFKRDMTQLKKEYGISE-SEKILIHISNFRKVKRVQ 227 (394)
T ss_dssp HHHSSEEEESCHHHHHH-----HHHHTCCSSCEEECCCCCCTTTCCCCCCHHHHHHTTCC----CEEEEECCCCGGGTHH
T ss_pred HhhCCEEEECCHHHHHH-----HHHhhCCcccEEEecCCccHHhcCCcchHHHHHHcCCCC-CCeEEEEeeccccccCHH
Confidence 45578887777533221 11222 235666664333221111 1223333332212 3355666787653 2223
Q ss_pred HHHHHHHHHHh-cCCcEEEEECCCCCCCccccCCchhHHHHhc----CCCeeEecccCh-HHhhcCCCcccee----ecC
Q 017557 192 QFQELILGFEL-TGLPFFAALKPPTGHDTIESALPEGFEERVK----GRGFVHGGWVQQ-QLILKHPSVGCFV----THC 261 (369)
Q Consensus 192 ~~~~~~~~l~~-~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~----~~~~~v~~~~pq-~~lL~~~~~~~~I----tHg 261 (369)
.+-+.+..+.. .+.++++ +|.+. ..+.+.+... ..++.+.++..+ ..+++.+++ +| .-|
T Consensus 228 ~li~a~~~l~~~~~~~l~i-~G~g~--------~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv--~v~ps~~e~ 296 (394)
T 2jjm_A 228 DVVQAFAKIVTEVDAKLLL-VGDGP--------EFCTILQLVKNLHIEDRVLFLGKQDNVAELLAMSDL--MLLLSEKES 296 (394)
T ss_dssp HHHHHHHHHHHSSCCEEEE-ECCCT--------THHHHHHHHHTTTCGGGBCCCBSCSCTHHHHHTCSE--EEECCSCCS
T ss_pred HHHHHHHHHHhhCCCEEEE-ECCch--------HHHHHHHHHHHcCCCCeEEEeCchhhHHHHHHhCCE--EEeccccCC
Confidence 33333333332 3454444 44321 1122332222 247777777544 569999999 77 445
Q ss_pred CCchHHHHHHhCCcccccccccchhHHHHHHhhhcceEEEEeecCCCCccCHHHHHHHHHHHhc
Q 017557 262 GSGSLSEAMVNECQLVLLPNVGDQIINSRLMGEDLKVGVEVERGDEDGLFTRDGVCKAVKAVMD 325 (369)
Q Consensus 262 G~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~~l~~ai~~ll~ 325 (369)
..+++.||+++|+|+|+.+.. .....+.+. +.|+.++.. +.+++.++|.++++
T Consensus 297 ~~~~~~EAma~G~PvI~~~~~----~~~e~v~~~-~~g~~~~~~------d~~~la~~i~~l~~ 349 (394)
T 2jjm_A 297 FGLVLLEAMACGVPCIGTRVG----GIPEVIQHG-DTGYLCEVG------DTTGVADQAIQLLK 349 (394)
T ss_dssp CCHHHHHHHHTTCCEEEECCT----TSTTTCCBT-TTEEEECTT------CHHHHHHHHHHHHH
T ss_pred CchHHHHHHhcCCCEEEecCC----ChHHHhhcC-CceEEeCCC------CHHHHHHHHHHHHc
Confidence 567899999999999997753 233344555 688888753 68999999999998
No 33
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=98.60 E-value=6.2e-06 Score=78.20 Aligned_cols=126 Identities=13% Similarity=0.101 Sum_probs=83.2
Q ss_pred eEEEeeCCC-cc-CCHHHHHHHHHHHHh--cCCcEEEEECCCCCCCccccCCchhHHHHhc--CCCeeEecccChH---H
Q 017557 177 LIFCALGSE-CV-LKKDQFQELILGFEL--TGLPFFAALKPPTGHDTIESALPEGFEERVK--GRGFVHGGWVQQQ---L 247 (369)
Q Consensus 177 ~v~vs~GS~-~~-~~~~~~~~~~~~l~~--~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~--~~~~~v~~~~pq~---~ 247 (369)
.+++..|+. .. ...+.+-+.+..+.. .+.+++++ |... . +.+.+... ..++.+.+++++. .
T Consensus 209 ~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~-G~~~--------~-~~l~~~~~~~~~~v~~~g~~~~~~~~~ 278 (406)
T 2gek_A 209 RTVLFLGRYDEPRKGMAVLLAALPKLVARFPDVEILIV-GRGD--------E-DELREQAGDLAGHLRFLGQVDDATKAS 278 (406)
T ss_dssp CEEEEESCTTSGGGCHHHHHHHHHHHHTTSTTCEEEEE-SCSC--------H-HHHHHHTGGGGGGEEECCSCCHHHHHH
T ss_pred eEEEEEeeeCccccCHHHHHHHHHHHHHHCCCeEEEEE-cCCc--------H-HHHHHHHHhccCcEEEEecCCHHHHHH
Confidence 566677877 43 223333344444432 24555444 4321 1 23333322 4689999999875 6
Q ss_pred hhcCCCccceee----cCCC-chHHHHHHhCCcccccccccchhHHHHHHhhhcceEEEEeecCCCCccCHHHHHHHHHH
Q 017557 248 ILKHPSVGCFVT----HCGS-GSLSEAMVNECQLVLLPNVGDQIINSRLMGEDLKVGVEVERGDEDGLFTRDGVCKAVKA 322 (369)
Q Consensus 248 lL~~~~~~~~It----HgG~-~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~~l~~ai~~ 322 (369)
+++.+++ +|. +.|. +++.||+++|+|+|+.+. ......+.+. +.|+.++.. +.+++.++|.+
T Consensus 279 ~~~~adv--~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~i~~~-~~g~~~~~~------d~~~l~~~i~~ 345 (406)
T 2gek_A 279 AMRSADV--YCAPHLGGESFGIVLVEAMAAGTAVVASDL----DAFRRVLADG-DAGRLVPVD------DADGMAAALIG 345 (406)
T ss_dssp HHHHSSE--EEECCCSCCSSCHHHHHHHHHTCEEEECCC----HHHHHHHTTT-TSSEECCTT------CHHHHHHHHHH
T ss_pred HHHHCCE--EEecCCCCCCCchHHHHHHHcCCCEEEecC----CcHHHHhcCC-CceEEeCCC------CHHHHHHHHHH
Confidence 8899999 663 3344 489999999999999765 4566677776 788888653 68999999999
Q ss_pred Hhc
Q 017557 323 VMD 325 (369)
Q Consensus 323 ll~ 325 (369)
+++
T Consensus 346 l~~ 348 (406)
T 2gek_A 346 ILE 348 (406)
T ss_dssp HHH
T ss_pred HHc
Confidence 998
No 34
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=98.51 E-value=3e-07 Score=86.56 Aligned_cols=137 Identities=9% Similarity=0.067 Sum_probs=83.8
Q ss_pred CCceEEEeeCCCccCCHHHHHHHHHHHHh-----cCCcEEEEECCCCCCCccccCCchhHHHHhc-CCCeeEecccCh--
Q 017557 174 AKSLIFCALGSECVLKKDQFQELILGFEL-----TGLPFFAALKPPTGHDTIESALPEGFEERVK-GRGFVHGGWVQQ-- 245 (369)
Q Consensus 174 ~~~~v~vs~GS~~~~~~~~~~~~~~~l~~-----~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~-~~~~~v~~~~pq-- 245 (369)
++++++++.|...... ..+..+++++.. .+.++++..+.. ..+-+.+.+... .+++.+.+++++
T Consensus 204 ~~~~vl~~~gr~~~~~-K~~~~li~a~~~l~~~~~~~~~i~~~g~~-------~~~~~~~~~~~~~~~~v~~~g~~~~~~ 275 (375)
T 3beo_A 204 NNRLVLMTAHRRENLG-EPMRNMFRAIKRLVDKHEDVQVVYPVHMN-------PVVRETANDILGDYGRIHLIEPLDVID 275 (375)
T ss_dssp TSEEEEEECCCGGGTT-HHHHHHHHHHHHHHHHCTTEEEEEECCSC-------HHHHHHHHHHHTTCTTEEEECCCCHHH
T ss_pred CCCeEEEEecccccch-hHHHHHHHHHHHHHhhCCCeEEEEeCCCC-------HHHHHHHHHHhhccCCEEEeCCCCHHH
Confidence 3457777777654322 234556666532 244444421110 111111222222 258988777765
Q ss_pred -HHhhcCCCccceeecCCCchHHHHHHhCCcccccccccchhHHHHHHhhhcceEEEEeecCCCCccCHHHHHHHHHHHh
Q 017557 246 -QLILKHPSVGCFVTHCGSGSLSEAMVNECQLVLLPNVGDQIINSRLMGEDLKVGVEVERGDEDGLFTRDGVCKAVKAVM 324 (369)
Q Consensus 246 -~~lL~~~~~~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~~l~~ai~~ll 324 (369)
..+++.+++ ||+.+| +.+.||+++|+|+|+....+.. ..+.+. |.|+.++. +.+++.++|.+++
T Consensus 276 ~~~~~~~ad~--~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~----~e~v~~-g~g~~v~~-------d~~~la~~i~~ll 340 (375)
T 3beo_A 276 FHNVAARSYL--MLTDSG-GVQEEAPSLGVPVLVLRDTTER----PEGIEA-GTLKLAGT-------DEETIFSLADELL 340 (375)
T ss_dssp HHHHHHTCSE--EEECCH-HHHHHHHHHTCCEEECSSCCSC----HHHHHT-TSEEECCS-------CHHHHHHHHHHHH
T ss_pred HHHHHHhCcE--EEECCC-ChHHHHHhcCCCEEEecCCCCC----ceeecC-CceEEcCC-------CHHHHHHHHHHHH
Confidence 468889999 998874 4588999999999988543332 234566 88887742 5789999999999
Q ss_pred ccCCcchHHHHHHH
Q 017557 325 DDDSEVGKDARQNH 338 (369)
Q Consensus 325 ~~~~~~~~~~~~~a 338 (369)
+ ++..+++.
T Consensus 341 ~-----~~~~~~~~ 349 (375)
T 3beo_A 341 S-----DKEAHDKM 349 (375)
T ss_dssp H-----CHHHHHHH
T ss_pred h-----ChHhHhhh
Confidence 8 56555443
No 35
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.51 E-value=8.3e-07 Score=74.83 Aligned_cols=129 Identities=10% Similarity=0.005 Sum_probs=85.4
Q ss_pred eEEEeeCCCccCCHHHHHHHHHHHHhc-CCcEEEEECCCCCCCccccCCchhHH--HHhcCCCeeEecccCh---HHhhc
Q 017557 177 LIFCALGSECVLKKDQFQELILGFELT-GLPFFAALKPPTGHDTIESALPEGFE--ERVKGRGFVHGGWVQQ---QLILK 250 (369)
Q Consensus 177 ~v~vs~GS~~~~~~~~~~~~~~~l~~~-~~~~i~~~~~~~~~~~~~~~lp~~~~--~~~~~~~~~v~~~~pq---~~lL~ 250 (369)
.+++..|+... ...+..+++++... +.+++++-... ....+-+... +.-...|+.+.+|+++ ..+++
T Consensus 24 ~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~l~i~G~~~-----~~~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~ 96 (177)
T 2f9f_A 24 DFWLSVNRIYP--EKRIELQLEVFKKLQDEKLYIVGWFS-----KGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYS 96 (177)
T ss_dssp SCEEEECCSSG--GGTHHHHHHHHHHCTTSCEEEEBCCC-----TTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHH
T ss_pred CEEEEEecccc--ccCHHHHHHHHHhCCCcEEEEEecCc-----cHHHHHHHHHhhhcccCCcEEEeCCCCHHHHHHHHH
Confidence 44556777653 23355566666554 56666654322 1111211111 1112459999999997 56889
Q ss_pred CCCccceee---cCCCc-hHHHHHHhCCcccccccccchhHHHHHHhhhcceEEEEeecCCCCccCHHHHHHHHHHHhcc
Q 017557 251 HPSVGCFVT---HCGSG-SLSEAMVNECQLVLLPNVGDQIINSRLMGEDLKVGVEVERGDEDGLFTRDGVCKAVKAVMDD 326 (369)
Q Consensus 251 ~~~~~~~It---HgG~~-s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~~l~~ai~~ll~~ 326 (369)
.+++ +|. +.|++ ++.||+++|+|+|+... ..+...+++. +.|+.+ . -+.+++.++|.+++++
T Consensus 97 ~adi--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~~-~~g~~~-~------~d~~~l~~~i~~l~~~ 162 (177)
T 2f9f_A 97 RCKG--LLCTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETVINE-KTGYLV-N------ADVNEIIDAMKKVSKN 162 (177)
T ss_dssp HCSE--EEECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHCCBT-TTEEEE-C------SCHHHHHHHHHHHHHC
T ss_pred hCCE--EEeCCCcCCCChHHHHHHHcCCcEEEeCC----CCHHHHhcCC-CccEEe-C------CCHHHHHHHHHHHHhC
Confidence 9999 665 34544 89999999999998753 5566667776 789888 4 4789999999999973
No 36
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=98.28 E-value=7.1e-05 Score=73.33 Aligned_cols=79 Identities=18% Similarity=0.090 Sum_probs=60.6
Q ss_pred CCCeeEecccChH---HhhcCC----CccceeecC---C-CchHHHHHHhCCcccccccccchhHHHHHHhhhcceEEEE
Q 017557 234 GRGFVHGGWVQQQ---LILKHP----SVGCFVTHC---G-SGSLSEAMVNECQLVLLPNVGDQIINSRLMGEDLKVGVEV 302 (369)
Q Consensus 234 ~~~~~v~~~~pq~---~lL~~~----~~~~~ItHg---G-~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l 302 (369)
..++.+.+++|+. .+++.+ ++ ||.-. | .+++.||+++|+|+|+-.. ......+.+. +.|+.+
T Consensus 334 ~~~V~~~G~v~~~~~~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~~----~g~~e~v~~~-~~g~l~ 406 (499)
T 2r60_A 334 RGKVSMFPLNSQQELAGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTRN----GGPAEILDGG-KYGVLV 406 (499)
T ss_dssp BTTEEEEECCSHHHHHHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEESS----BHHHHHTGGG-TSSEEE
T ss_pred CceEEECCCCCHHHHHHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEecC----CCHHHHhcCC-ceEEEe
Confidence 4579999999765 478888 88 66322 3 3689999999999998753 3455556665 688888
Q ss_pred eecCCCCccCHHHHHHHHHHHhc
Q 017557 303 ERGDEDGLFTRDGVCKAVKAVMD 325 (369)
Q Consensus 303 ~~~~~~~~~~~~~l~~ai~~ll~ 325 (369)
+.. +.+++.++|.++++
T Consensus 407 ~~~------d~~~la~~i~~ll~ 423 (499)
T 2r60_A 407 DPE------DPEDIARGLLKAFE 423 (499)
T ss_dssp CTT------CHHHHHHHHHHHHS
T ss_pred CCC------CHHHHHHHHHHHHh
Confidence 763 68999999999998
No 37
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=98.19 E-value=0.00015 Score=69.21 Aligned_cols=162 Identities=11% Similarity=0.014 Sum_probs=98.0
Q ss_pred eEEEeeCCCc-c-CCHHHHHHHHHHHHh----cCCcEEEEECCCCCCCccccCCchhHHHHh--cCCCeeEecccChHH-
Q 017557 177 LIFCALGSEC-V-LKKDQFQELILGFEL----TGLPFFAALKPPTGHDTIESALPEGFEERV--KGRGFVHGGWVQQQL- 247 (369)
Q Consensus 177 ~v~vs~GS~~-~-~~~~~~~~~~~~l~~----~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~--~~~~~~v~~~~pq~~- 247 (369)
.+++..|+.. . ...+.+-+.+..+.. .+.+++++ |.+. ....+.+.+.. .+.++.+.+|+|+.+
T Consensus 252 ~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~-G~g~------~~~~~~l~~~~~~~~~~~~~~g~~~~~~~ 324 (439)
T 3fro_A 252 VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIII-GKGD------PELEGWARSLEEKHGNVKVITEMLSREFV 324 (439)
T ss_dssp EEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEEEE-CCCC------HHHHHHHHHHHHHCTTEEEECSCCCHHHH
T ss_pred cEEEEEcccccccccHHHHHHHHHHHHhcccCCCeEEEEE-cCCC------hhHHHHHHHHHhhcCCEEEEcCCCCHHHH
Confidence 7777788876 3 344555555555544 34555444 3321 10111222211 124566778898854
Q ss_pred --hhcCCCccceeec----CCCchHHHHHHhCCcccccccccchhHHHHHHhhhcceEEEEeecCCCCccCHHHHHHHHH
Q 017557 248 --ILKHPSVGCFVTH----CGSGSLSEAMVNECQLVLLPNVGDQIINSRLMGEDLKVGVEVERGDEDGLFTRDGVCKAVK 321 (369)
Q Consensus 248 --lL~~~~~~~~ItH----gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~~l~~ai~ 321 (369)
+++.+++ +|.- |-.+++.||+++|+|+|+-.. ......+ +. |.|+.++.. +.+++.++|.
T Consensus 325 ~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~Pvi~s~~----~~~~e~~-~~-~~g~~~~~~------d~~~la~~i~ 390 (439)
T 3fro_A 325 RELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDII-TN-ETGILVKAG------DPGELANAIL 390 (439)
T ss_dssp HHHHTTCSE--EEECBSCCSSCHHHHHHHHTTCEEEEESS----THHHHHC-CT-TTCEEECTT------CHHHHHHHHH
T ss_pred HHHHHHCCE--EEeCCCCCCccHHHHHHHHCCCCeEEcCC----CCcceeE-Ec-CceEEeCCC------CHHHHHHHHH
Confidence 7888998 6632 223689999999999999653 3333333 35 788888763 6899999999
Q ss_pred HHhc-cCCcchHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHh
Q 017557 322 AVMD-DDSEVGKDARQNHAELREFLISPGLENSYVDGFVQELHS 364 (369)
Q Consensus 322 ~ll~-~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~v~~l~~ 364 (369)
++++ + .+....+.+++++..+. -+-...++.+.+.+.+
T Consensus 391 ~ll~~~-~~~~~~~~~~~~~~~~~----~s~~~~~~~~~~~~~~ 429 (439)
T 3fro_A 391 KALELS-RSDLSKFRENCKKRAMS----FSWEKSAERYVKAYTG 429 (439)
T ss_dssp HHHHHT-TTTTHHHHHHHHHHHHT----SCHHHHHHHHHHHHHT
T ss_pred HHHhcC-HHHHHHHHHHHHHHHhh----CcHHHHHHHHHHHHHH
Confidence 9997 4 44456677777665532 3444555555555443
No 38
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=98.16 E-value=0.00015 Score=69.03 Aligned_cols=111 Identities=9% Similarity=0.004 Sum_probs=73.7
Q ss_pred CCCeeEecccC---h---HHhhcCCCccceeecC----CCchHHHHHHhCCcccccccccchhHHHHHHhhhcceEEEEe
Q 017557 234 GRGFVHGGWVQ---Q---QLILKHPSVGCFVTHC----GSGSLSEAMVNECQLVLLPNVGDQIINSRLMGEDLKVGVEVE 303 (369)
Q Consensus 234 ~~~~~v~~~~p---q---~~lL~~~~~~~~ItHg----G~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~ 303 (369)
..++.+.+|++ + ..+++.+++ +|.-. ..+++.||+++|+|+|+.+. ..+...+.+. +.|+.++
T Consensus 292 ~~~V~~~G~~~~~~~~~~~~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i~~~-~~g~l~~ 364 (416)
T 2x6q_A 292 DYDVKVLTNLIGVHAREVNAFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQIVDG-ETGFLVR 364 (416)
T ss_dssp CTTEEEEEGGGTCCHHHHHHHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHCCBT-TTEEEES
T ss_pred CCcEEEecccCCCCHHHHHHHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhheecC-CCeEEEC
Confidence 46899988775 2 358888998 77544 34688999999999999764 4566667776 7888885
Q ss_pred ecCCCCccCHHHHHHHHHHHhccCCcchHHHHHHHHHH-HHHHhcCCCCHHHHHHHHHHHHh
Q 017557 304 RGDEDGLFTRDGVCKAVKAVMDDDSEVGKDARQNHAEL-REFLISPGLENSYVDGFVQELHS 364 (369)
Q Consensus 304 ~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~a~~l-~~~~~~~~~~~~~~~~~v~~l~~ 364 (369)
+.+++.++|.++++ ++..+++..+- .+.+.+.-+....++.+.+.+.+
T Consensus 365 --------d~~~la~~i~~ll~-----~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~ 413 (416)
T 2x6q_A 365 --------DANEAVEVVLYLLK-----HPEVSKEMGAKAKERVRKNFIITKHMERYLDILNS 413 (416)
T ss_dssp --------SHHHHHHHHHHHHH-----CHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHT
T ss_pred --------CHHHHHHHHHHHHh-----CHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 46899999999998 44433332222 22233233444555666555543
No 39
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=98.04 E-value=2.7e-05 Score=72.83 Aligned_cols=160 Identities=9% Similarity=0.101 Sum_probs=97.5
Q ss_pred CceEEEeeCCCccCCHHHHHHHHHHHHhc------CCcEEEEECCCCCCCccccCCchhHHHHhc----CCCeeEecccC
Q 017557 175 KSLIFCALGSECVLKKDQFQELILGFELT------GLPFFAALKPPTGHDTIESALPEGFEERVK----GRGFVHGGWVQ 244 (369)
Q Consensus 175 ~~~v~vs~GS~~~~~~~~~~~~~~~l~~~------~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~----~~~~~v~~~~p 244 (369)
+..+++..|+.... ..+..+++++... +.++++ +|.+. .+.+.+... ..++.+.++..
T Consensus 195 ~~~~i~~~G~~~~~--K~~~~li~a~~~l~~~~~~~~~l~i-~G~g~---------~~~~~~~~~~~~~~~~v~~~g~~~ 262 (374)
T 2iw1_A 195 QQNLLLQVGSDFGR--KGVDRSIEALASLPESLRHNTLLFV-VGQDK---------PRKFEALAEKLGVRSNVHFFSGRN 262 (374)
T ss_dssp TCEEEEEECSCTTT--TTHHHHHHHHHTSCHHHHHTEEEEE-ESSSC---------CHHHHHHHHHHTCGGGEEEESCCS
T ss_pred CCeEEEEeccchhh--cCHHHHHHHHHHhHhccCCceEEEE-EcCCC---------HHHHHHHHHHcCCCCcEEECCCcc
Confidence 34666777876532 2344455665432 334444 44321 122322221 35888888865
Q ss_pred h-HHhhcCCCccceee----cCCCchHHHHHHhCCcccccccccchhHHHHHHhhhcceEEEEeecCCCCccCHHHHHHH
Q 017557 245 Q-QLILKHPSVGCFVT----HCGSGSLSEAMVNECQLVLLPNVGDQIINSRLMGEDLKVGVEVERGDEDGLFTRDGVCKA 319 (369)
Q Consensus 245 q-~~lL~~~~~~~~It----HgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~~l~~a 319 (369)
+ ..+++.+++ +|. -|..+++.||+++|+|+|+.+. ..+...+++. +.|+.+... -+.+++.++
T Consensus 263 ~~~~~~~~ad~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i~~~-~~g~~~~~~-----~~~~~l~~~ 330 (374)
T 2iw1_A 263 DVSELMAAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTAV----CGYAHYIADA-NCGTVIAEP-----FSQEQLNEV 330 (374)
T ss_dssp CHHHHHHHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEETT----STTTHHHHHH-TCEEEECSS-----CCHHHHHHH
T ss_pred cHHHHHHhcCE--EEeccccCCcccHHHHHHHCCCCEEEecC----CCchhhhccC-CceEEeCCC-----CCHHHHHHH
Confidence 4 558999998 775 4556789999999999999765 3455677777 899998732 478999999
Q ss_pred HHHHhccCCcchHHHHHHHHHHHHHHhcCCCCHHHHHHHHH
Q 017557 320 VKAVMDDDSEVGKDARQNHAELREFLISPGLENSYVDGFVQ 360 (369)
Q Consensus 320 i~~ll~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~v~ 360 (369)
|.+++++ .+....+.+++++..+.. +.....+.+.++++
T Consensus 331 i~~l~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~ 369 (374)
T 2iw1_A 331 LRKALTQ-SPLRMAWAENARHYADTQ-DLYSLPEKAADIIT 369 (374)
T ss_dssp HHHHHHC-HHHHHHHHHHHHHHHHHS-CCSCHHHHHHHHHH
T ss_pred HHHHHcC-hHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHH
Confidence 9999982 222334555555554433 12333344444443
No 40
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=97.69 E-value=0.0012 Score=68.46 Aligned_cols=78 Identities=12% Similarity=0.053 Sum_probs=54.4
Q ss_pred CCCeeEeccc----ChHHhhc----CCCccceeec----CCCchHHHHHHhCCcccccccccchhHHHHHHhhhcceEEE
Q 017557 234 GRGFVHGGWV----QQQLILK----HPSVGCFVTH----CGSGSLSEAMVNECQLVLLPNVGDQIINSRLMGEDLKVGVE 301 (369)
Q Consensus 234 ~~~~~v~~~~----pq~~lL~----~~~~~~~ItH----gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~ 301 (369)
..++.+.++. |+.++.. .+++ ||.- |-..++.||+++|+|+|+- |.......+.+- +.|+.
T Consensus 639 ~~~V~flG~~~~~v~~~eL~~~~~~aaDv--fV~PS~~EgfglvllEAMA~G~PVIas----d~GG~~EiV~dg-~~Gll 711 (816)
T 3s28_A 639 NGQFRWISSQMDRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVHG-KSGFH 711 (816)
T ss_dssp BBBEEEECCCCCHHHHHHHHHHHHHTTCE--EEECCSCBSSCHHHHHHHHTTCCEEEE----SSBTHHHHCCBT-TTBEE
T ss_pred CCcEEEccCccccCCHHHHHHHHHhcCeE--EEECCCccCccHHHHHHHHcCCCEEEe----CCCChHHHHccC-CcEEE
Confidence 3578887744 4444443 4567 6642 2346899999999999995 444556666666 78988
Q ss_pred EeecCCCCccCHHHHHHHHHHHh
Q 017557 302 VERGDEDGLFTRDGVCKAVKAVM 324 (369)
Q Consensus 302 l~~~~~~~~~~~~~l~~ai~~ll 324 (369)
++.. +.+++.++|.+++
T Consensus 712 v~p~------D~e~LA~aI~~lL 728 (816)
T 3s28_A 712 IDPY------HGDQAADTLADFF 728 (816)
T ss_dssp ECTT------SHHHHHHHHHHHH
T ss_pred eCCC------CHHHHHHHHHHHH
Confidence 8763 6888999987766
No 41
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=97.64 E-value=0.0012 Score=55.84 Aligned_cols=92 Identities=9% Similarity=0.000 Sum_probs=66.0
Q ss_pred CeeE-ecccChH---HhhcCCCccceeecC---C-CchHHHHHHhCCcccccccccchhHHHHHHhhhcceEEEEeecCC
Q 017557 236 GFVH-GGWVQQQ---LILKHPSVGCFVTHC---G-SGSLSEAMVNECQLVLLPNVGDQIINSRLMGEDLKVGVEVERGDE 307 (369)
Q Consensus 236 ~~~v-~~~~pq~---~lL~~~~~~~~ItHg---G-~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~ 307 (369)
++.+ .+++++. .+++.+++ +|.-. | ..++.||+++|+|+|+... ..+...+ +. +.|+.++.
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~~-~~-~~g~~~~~--- 164 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDII-TN-ETGILVKA--- 164 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESC----HHHHHHC-CT-TTCEEECT---
T ss_pred CEEEEeccCCHHHHHHHHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeCC----CChHHHc-CC-CceEEecC---
Confidence 8888 9999853 58888998 66432 3 3578999999999998754 3455556 55 78888865
Q ss_pred CCccCHHHHHHHHHHHhc-cCCcchHHHHHHHHHHH
Q 017557 308 DGLFTRDGVCKAVKAVMD-DDSEVGKDARQNHAELR 342 (369)
Q Consensus 308 ~~~~~~~~l~~ai~~ll~-~~~~~~~~~~~~a~~l~ 342 (369)
-+.+++.++|.++++ + .+....+.+++++..
T Consensus 165 ---~~~~~l~~~i~~l~~~~-~~~~~~~~~~a~~~~ 196 (200)
T 2bfw_A 165 ---GDPGELANAILKALELS-RSDLSKFRENCKKRA 196 (200)
T ss_dssp ---TCHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHH
T ss_pred ---CCHHHHHHHHHHHHhcC-HHHHHHHHHHHHHHH
Confidence 368999999999986 5 333344555555543
No 42
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.57 E-value=0.00036 Score=57.29 Aligned_cols=92 Identities=11% Similarity=0.103 Sum_probs=56.6
Q ss_pred CeeEecccChH---HhhcCCCccceee----cCCCchHHHHHHhCC-cccccccccchhHHHHHHhhhcceEEEEeecCC
Q 017557 236 GFVHGGWVQQQ---LILKHPSVGCFVT----HCGSGSLSEAMVNEC-QLVLLPNVGDQIINSRLMGEDLKVGVEVERGDE 307 (369)
Q Consensus 236 ~~~v~~~~pq~---~lL~~~~~~~~It----HgG~~s~~Eal~~Gv-P~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~ 307 (369)
++.+ +|+|+. .+++.+++ +|. -|...++.||+++|+ |+|+-...+ .....+.+. +. .+..
T Consensus 57 ~v~~-g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~---~~~~~~~~~-~~--~~~~--- 124 (166)
T 3qhp_A 57 KAEF-GFVNSNELLEILKTCTL--YVHAANVESEAIACLEAISVGIVPVIANSPLS---ATRQFALDE-RS--LFEP--- 124 (166)
T ss_dssp EEEC-CCCCHHHHHHHHTTCSE--EEECCCSCCCCHHHHHHHHTTCCEEEECCTTC---GGGGGCSSG-GG--EECT---
T ss_pred eEEE-eecCHHHHHHHHHhCCE--EEECCcccCccHHHHHHHhcCCCcEEeeCCCC---chhhhccCC-ce--EEcC---
Confidence 6777 888864 47888888 665 233458999999996 999933211 111122222 33 3333
Q ss_pred CCccCHHHHHHHHHHHhccCCcchHHHHHHHHHHHH
Q 017557 308 DGLFTRDGVCKAVKAVMDDDSEVGKDARQNHAELRE 343 (369)
Q Consensus 308 ~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~a~~l~~ 343 (369)
-+.+++.++|.+++++ .+....+.+++++..+
T Consensus 125 ---~~~~~l~~~i~~l~~~-~~~~~~~~~~~~~~~~ 156 (166)
T 3qhp_A 125 ---NNAKDLSAKIDWWLEN-KLERERMQNEYAKSAL 156 (166)
T ss_dssp ---TCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHH
T ss_pred ---CCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHH
Confidence 4789999999999982 2223345555555443
No 43
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=97.51 E-value=0.0012 Score=62.49 Aligned_cols=107 Identities=11% Similarity=0.103 Sum_probs=66.9
Q ss_pred eeEecccChH---HhhcCCCccceee--c--CCCchHHHHHHhCCcccccccccchhHHHHHHhhhcce-----------
Q 017557 237 FVHGGWVQQQ---LILKHPSVGCFVT--H--CGSGSLSEAMVNECQLVLLPNVGDQIINSRLMGEDLKV----------- 298 (369)
Q Consensus 237 ~~v~~~~pq~---~lL~~~~~~~~It--H--gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~----------- 298 (369)
+.+.+|+|+. .+++.+++ +|. + |...++.||+++|+|+|+-.. ......+.+. ..
T Consensus 256 v~~~g~~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----~g~~e~v~~~-~~~~i~~~~~~~~ 328 (413)
T 3oy2_A 256 MINRTVLTDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISAV----GGADDYFSGD-CVYKIKPSAWISV 328 (413)
T ss_dssp EEECSCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEECC----HHHHHHSCTT-TSEEECCCEEEEC
T ss_pred eeccCcCCHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcCC----CChHHHHccC-ccccccccccccc
Confidence 6777999854 47888998 663 2 223589999999999998653 3344444433 22
Q ss_pred ----EE--EEeecCCCCccCHHHHHHHHHHHhccCCcchHHHHHHHHHHHH-HHhcCCCCHHHHHHHHHHH
Q 017557 299 ----GV--EVERGDEDGLFTRDGVCKAVKAVMDDDSEVGKDARQNHAELRE-FLISPGLENSYVDGFVQEL 362 (369)
Q Consensus 299 ----G~--~l~~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~a~~l~~-~~~~~~~~~~~~~~~v~~l 362 (369)
|+ .+.. -+.+++.++| ++++ ++..+++..+-+. .+++.-+-++.++.+.+.+
T Consensus 329 ~~~~G~~gl~~~------~d~~~la~~i-~l~~-----~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~ 387 (413)
T 3oy2_A 329 DDRDGIGGIEGI------IDVDDLVEAF-TFFK-----DEKNRKEYGKRVQDFVKTKPTWDDISSDIIDFF 387 (413)
T ss_dssp TTTCSSCCEEEE------CCHHHHHHHH-HHTT-----SHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHH
T ss_pred ccccCcceeeCC------CCHHHHHHHH-HHhc-----CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 55 5655 3789999999 9998 5555444443333 3333444444444444443
No 44
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=97.50 E-value=0.0015 Score=64.83 Aligned_cols=90 Identities=11% Similarity=0.072 Sum_probs=62.1
Q ss_pred CCeeEecccChH---HhhcCCCcccee--e-cCCCchHHHHHHhCCcccccccccc-hhHHHHHHhhhcceEEEEeecCC
Q 017557 235 RGFVHGGWVQQQ---LILKHPSVGCFV--T-HCGSGSLSEAMVNECQLVLLPNVGD-QIINSRLMGEDLKVGVEVERGDE 307 (369)
Q Consensus 235 ~~~~v~~~~pq~---~lL~~~~~~~~I--t-HgG~~s~~Eal~~GvP~i~~P~~~D-Q~~na~~v~~~~g~G~~l~~~~~ 307 (369)
.+|++.+++|+. .+++.+++ || + .|+.+++.||+++|+|+|+.|-..- -..-+..+... |+...+..
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~~-g~~e~v~~--- 507 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLNHHL-GLDEMNVA--- 507 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHHH-TCGGGBCS---
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHHC-CChhhhcC---
Confidence 579999999854 47888998 76 2 2556788999999999999875311 11123455555 66544422
Q ss_pred CCccCHHHHHHHHHHHhccCCcchHHHHHHHH
Q 017557 308 DGLFTRDGVCKAVKAVMDDDSEVGKDARQNHA 339 (369)
Q Consensus 308 ~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~a~ 339 (369)
+.+++.++|.++++ ++..+++..
T Consensus 508 ----~~~~la~~i~~l~~-----~~~~~~~~~ 530 (568)
T 2vsy_A 508 ----DDAAFVAKAVALAS-----DPAALTALH 530 (568)
T ss_dssp ----SHHHHHHHHHHHHH-----CHHHHHHHH
T ss_pred ----CHHHHHHHHHHHhc-----CHHHHHHHH
Confidence 68899999999998 555544443
No 45
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=97.50 E-value=0.0003 Score=65.10 Aligned_cols=125 Identities=14% Similarity=0.075 Sum_probs=80.0
Q ss_pred EEEeeCCCccCCHHHHHHHHHHHHhcCCcEEEEECCCCCCCccccCCchhHHHHhcCCCeeEecccChH---HhhcCCCc
Q 017557 178 IFCALGSECVLKKDQFQELILGFELTGLPFFAALKPPTGHDTIESALPEGFEERVKGRGFVHGGWVQQQ---LILKHPSV 254 (369)
Q Consensus 178 v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~---~lL~~~~~ 254 (369)
+++..|+... ...+..+++++...+.+++++ |.+. ....+ +.+.++.. .++.+.+|+++. .+++.+++
T Consensus 164 ~i~~vG~~~~--~Kg~~~li~a~~~~~~~l~i~-G~g~----~~~~l-~~~~~~~~-~~v~~~g~~~~~~l~~~~~~adv 234 (342)
T 2iuy_A 164 FLLFMGRVSP--HKGALEAAAFAHACGRRLVLA-GPAW----EPEYF-DEITRRYG-STVEPIGEVGGERRLDLLASAHA 234 (342)
T ss_dssp CEEEESCCCG--GGTHHHHHHHHHHHTCCEEEE-SCCC----CHHHH-HHHHHHHT-TTEEECCCCCHHHHHHHHHHCSE
T ss_pred EEEEEecccc--ccCHHHHHHHHHhcCcEEEEE-eCcc----cHHHH-HHHHHHhC-CCEEEeccCCHHHHHHHHHhCCE
Confidence 3445677652 233556666666667776665 3321 01111 11222222 799999999975 68999999
Q ss_pred ccee--ec-----------CC-CchHHHHHHhCCcccccccccchhHHHHHHhh--hcceEEEEeecCCCCccCHHHHHH
Q 017557 255 GCFV--TH-----------CG-SGSLSEAMVNECQLVLLPNVGDQIINSRLMGE--DLKVGVEVERGDEDGLFTRDGVCK 318 (369)
Q Consensus 255 ~~~I--tH-----------gG-~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~--~~g~G~~l~~~~~~~~~~~~~l~~ 318 (369)
+| ++ -| .+++.||+++|+|+|+... ..+...+++ - +.|+.++. +.+++.+
T Consensus 235 --~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~----~~~~e~~~~~~~-~~g~~~~~-------d~~~l~~ 300 (342)
T 2iuy_A 235 --VLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGN----GCLAEIVPSVGE-VVGYGTDF-------APDEARR 300 (342)
T ss_dssp --EEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCT----TTHHHHGGGGEE-ECCSSSCC-------CHHHHHH
T ss_pred --EEECCcccccccccccccCccHHHHHHHhcCCCEEEcCC----CChHHHhcccCC-CceEEcCC-------CHHHHHH
Confidence 66 33 33 3579999999999999865 346666766 5 56665542 5789999
Q ss_pred HHHHHhc
Q 017557 319 AVKAVMD 325 (369)
Q Consensus 319 ai~~ll~ 325 (369)
+|.++++
T Consensus 301 ~i~~l~~ 307 (342)
T 2iuy_A 301 TLAGLPA 307 (342)
T ss_dssp HHHTSCC
T ss_pred HHHHHHH
Confidence 9988874
No 46
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.22 E-value=0.003 Score=64.90 Aligned_cols=139 Identities=9% Similarity=0.048 Sum_probs=92.2
Q ss_pred CCceEEEeeCCCccCCHHHHHHHHHHHHhcCCcEEEEECCCCCCCccccCCchhHHH-HhcCCCeeEecccChHH---hh
Q 017557 174 AKSLIFCALGSECVLKKDQFQELILGFELTGLPFFAALKPPTGHDTIESALPEGFEE-RVKGRGFVHGGWVQQQL---IL 249 (369)
Q Consensus 174 ~~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~-~~~~~~~~v~~~~pq~~---lL 249 (369)
++.+||.||.+....+++.+....+-|++.+-.++|........ ...+-..+.. -+....+++.+..|..+ .+
T Consensus 521 ~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~~---~~~l~~~~~~~gi~~~r~~f~~~~~~~~~l~~~ 597 (723)
T 4gyw_A 521 EDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVG---EPNIQQYAQNMGLPQNRIIFSPVAPKEEHVRRG 597 (723)
T ss_dssp TTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGGG---HHHHHHHHHHTTCCGGGEEEEECCCHHHHHHHG
T ss_pred CCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHHH---HHHHHHHHHhcCCCcCeEEECCCCCHHHHHHHh
Confidence 45699999999988999999988888888877788887643110 0111111111 12345788888888655 44
Q ss_pred cCCCccceee---cCCCchHHHHHHhCCcccccccc-cchhHHHHHHhhhcceEEEEeecCCCCccCHHHHHHHHHHHhc
Q 017557 250 KHPSVGCFVT---HCGSGSLSEAMVNECQLVLLPNV-GDQIINSRLMGEDLKVGVEVERGDEDGLFTRDGVCKAVKAVMD 325 (369)
Q Consensus 250 ~~~~~~~~It---HgG~~s~~Eal~~GvP~i~~P~~-~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~~l~~ai~~ll~ 325 (369)
..+++ ++. .+|.+|+.||+++|||+|++|-. .-...-+..+... |+.-.+..+ ..+-+..||+ +-+
T Consensus 598 ~~~Di--~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~~-gl~e~ia~~------~~~Y~~~a~~-la~ 667 (723)
T 4gyw_A 598 QLADV--CLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCL-GCLELIAKN------RQEYEDIAVK-LGT 667 (723)
T ss_dssp GGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHHH-TCGGGBCSS------HHHHHHHHHH-HHH
T ss_pred CCCeE--EeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHHc-CCcccccCC------HHHHHHHHHH-Hhc
Confidence 55666 876 88999999999999999999942 2223344566666 776555432 3455677774 444
No 47
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.07 E-value=0.0031 Score=62.89 Aligned_cols=137 Identities=11% Similarity=0.037 Sum_probs=85.0
Q ss_pred CceEEEeeCCCccCCHHHHHHHHHHHHhcCCcEEEE--ECCCCCCCccccCCchhHHH-HhcCCCeeEecccChHH---h
Q 017557 175 KSLIFCALGSECVLKKDQFQELILGFELTGLPFFAA--LKPPTGHDTIESALPEGFEE-RVKGRGFVHGGWVQQQL---I 248 (369)
Q Consensus 175 ~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~--~~~~~~~~~~~~~lp~~~~~-~~~~~~~~v~~~~pq~~---l 248 (369)
+.++|.+|++.....++.++...+-+++.+..++|. .+.... ....+-..+.+ .+. +.+.+.+.+|..+ .
T Consensus 440 G~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~g---~~~~~~~~~~~~GI~-~Rv~F~g~~p~~e~la~ 515 (631)
T 3q3e_A 440 EVVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSNG---ITHPYVERFIKSYLG-DSATAHPHSPYHQYLRI 515 (631)
T ss_dssp SEEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSCCG---GGHHHHHHHHHHHHG-GGEEEECCCCHHHHHHH
T ss_pred CeEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCch---hhHHHHHHHHHcCCC-ccEEEcCCCCHHHHHHH
Confidence 358999999988788888888888887766666663 342110 01111111211 122 4677888888765 4
Q ss_pred hcCCCccceee---cCCCchHHHHHHhCCccccccccc-chhHHHHHHhhhcceEEE-EeecCCCCccCHHHHHHHHHHH
Q 017557 249 LKHPSVGCFVT---HCGSGSLSEAMVNECQLVLLPNVG-DQIINSRLMGEDLKVGVE-VERGDEDGLFTRDGVCKAVKAV 323 (369)
Q Consensus 249 L~~~~~~~~It---HgG~~s~~Eal~~GvP~i~~P~~~-DQ~~na~~v~~~~g~G~~-l~~~~~~~~~~~~~l~~ai~~l 323 (369)
++.+++ |+. .+|.+|+.||+++|||+|+.+-.. --..-+..+... |..-. +.. +.++..+..-++
T Consensus 516 y~~aDI--fLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~~-GLpE~LIA~-------d~eeYv~~Av~L 585 (631)
T 3q3e_A 516 LHNCDM--MVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKRL-GLPEWLIAN-------TVDEYVERAVRL 585 (631)
T ss_dssp HHTCSE--EECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHHT-TCCGGGEES-------SHHHHHHHHHHH
T ss_pred HhcCcE--EEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHhc-CCCcceecC-------CHHHHHHHHHHH
Confidence 477777 653 377899999999999999998532 122233445555 76542 322 455555555577
Q ss_pred hc
Q 017557 324 MD 325 (369)
Q Consensus 324 l~ 325 (369)
.+
T Consensus 586 a~ 587 (631)
T 3q3e_A 586 AE 587 (631)
T ss_dssp HH
T ss_pred hC
Confidence 76
No 48
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=97.02 E-value=0.034 Score=52.75 Aligned_cols=73 Identities=12% Similarity=0.044 Sum_probs=56.7
Q ss_pred CCeeEecccChH---HhhcCCCccceee---cCC-CchHHHHH-------HhCCcccccccccchhHHHHHHhhhcceEE
Q 017557 235 RGFVHGGWVQQQ---LILKHPSVGCFVT---HCG-SGSLSEAM-------VNECQLVLLPNVGDQIINSRLMGEDLKVGV 300 (369)
Q Consensus 235 ~~~~v~~~~pq~---~lL~~~~~~~~It---HgG-~~s~~Eal-------~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~ 300 (369)
+++.+.+++|+. .+++.+++ ||. +-| .+++.||+ ++|+|+|+-.. +.+. ..|+
T Consensus 265 ~~V~f~G~~~~~~l~~~~~~adv--~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v~~~-~~G~ 331 (406)
T 2hy7_A 265 DNVIVYGEMKHAQTIGYIKHARF--GIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------VVGP-YKSR 331 (406)
T ss_dssp TTEEEECCCCHHHHHHHHHTCSE--EECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------GTCS-CSSE
T ss_pred CCEEEcCCCCHHHHHHHHHhcCE--EEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------cccC-cceE
Confidence 489999999865 47888998 553 234 35788999 99999999754 5555 6788
Q ss_pred E-EeecCCCCccCHHHHHHHHHHHhcc
Q 017557 301 E-VERGDEDGLFTRDGVCKAVKAVMDD 326 (369)
Q Consensus 301 ~-l~~~~~~~~~~~~~l~~ai~~ll~~ 326 (369)
. +... +.+++.++|.+++++
T Consensus 332 l~v~~~------d~~~la~ai~~ll~~ 352 (406)
T 2hy7_A 332 FGYTPG------NADSVIAAITQALEA 352 (406)
T ss_dssp EEECTT------CHHHHHHHHHHHHHC
T ss_pred EEeCCC------CHHHHHHHHHHHHhC
Confidence 7 6653 689999999999973
No 49
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=96.98 E-value=0.013 Score=56.61 Aligned_cols=128 Identities=15% Similarity=0.092 Sum_probs=75.9
Q ss_pred eEEEeeCCCccCC-HHHHHHHHHHHHhcCCcEEEEECCCCCCCccccCCchhHHHHhc--CCCee-EecccCh--HHhhc
Q 017557 177 LIFCALGSECVLK-KDQFQELILGFELTGLPFFAALKPPTGHDTIESALPEGFEERVK--GRGFV-HGGWVQQ--QLILK 250 (369)
Q Consensus 177 ~v~vs~GS~~~~~-~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~--~~~~~-v~~~~pq--~~lL~ 250 (369)
.+++..|...... .+.+-+.+..+...+.+++++-... ..+-+.+.+... +.++. +.++... ..+++
T Consensus 292 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~-------~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~ 364 (485)
T 1rzu_A 292 PLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGD-------VALEGALLAAASRHHGRVGVAIGYNEPLSHLMQA 364 (485)
T ss_dssp CEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEEECBC-------HHHHHHHHHHHHHTTTTEEEEESCCHHHHHHHHH
T ss_pred eEEEEEccCccccCHHHHHHHHHHHHhcCceEEEEeCCc-------hHHHHHHHHHHHhCCCcEEEecCCCHHHHHHHHh
Confidence 4677778876422 3334444444434466666653221 001112222211 35786 6777333 25789
Q ss_pred CCCccceeec----CCCchHHHHHHhCCcccccccccchhHHHHHHhh---------hcceEEEEeecCCCCccCHHHHH
Q 017557 251 HPSVGCFVTH----CGSGSLSEAMVNECQLVLLPNVGDQIINSRLMGE---------DLKVGVEVERGDEDGLFTRDGVC 317 (369)
Q Consensus 251 ~~~~~~~ItH----gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~---------~~g~G~~l~~~~~~~~~~~~~l~ 317 (369)
.+++ ||.- |-..++.||+++|+|+|+-.. ......+.+ . +.|+.++. -+.+++.
T Consensus 365 ~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----gg~~e~v~~~~~~~~~~~~-~~G~l~~~------~d~~~la 431 (485)
T 1rzu_A 365 GCDA--IIIPSRFEPCGLTQLYALRYGCIPVVART----GGLADTVIDANHAALASKA-ATGVQFSP------VTLDGLK 431 (485)
T ss_dssp HCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCBCCHHHHHTTC-CCBEEESS------CSHHHHH
T ss_pred cCCE--EEECcccCCCCHHHHHHHHCCCCEEEeCC----CChhheecccccccccccC-CcceEeCC------CCHHHHH
Confidence 9998 6632 334689999999999999764 233333332 1 36777765 3689999
Q ss_pred HHHHHHh
Q 017557 318 KAVKAVM 324 (369)
Q Consensus 318 ~ai~~ll 324 (369)
++|.+++
T Consensus 432 ~~i~~ll 438 (485)
T 1rzu_A 432 QAIRRTV 438 (485)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999999
No 50
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=96.94 E-value=0.00099 Score=62.10 Aligned_cols=111 Identities=12% Similarity=0.097 Sum_probs=81.0
Q ss_pred CeeEecccChHHh---hcCCCccceeecCCC---------chHHHHHHhCCcccccccccchhHHHHHHhhhcceEEEEe
Q 017557 236 GFVHGGWVQQQLI---LKHPSVGCFVTHCGS---------GSLSEAMVNECQLVLLPNVGDQIINSRLMGEDLKVGVEVE 303 (369)
Q Consensus 236 ~~~v~~~~pq~~l---L~~~~~~~~ItHgG~---------~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~ 303 (369)
|+...+|+|+.++ |+.++++++.+-+.+ +-+.|++++|+|+|+.+ ...++..+++. |+|+.++
T Consensus 215 nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v~~~-~~G~~~~ 289 (339)
T 3rhz_A 215 NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELIENN-GLGWIVK 289 (339)
T ss_dssp TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHHHHH-TCEEEES
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHHHhC-CeEEEeC
Confidence 8999999998774 545556545422222 34789999999999855 55778889999 9999885
Q ss_pred ecCCCCccCHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Q 017557 304 RGDEDGLFTRDGVCKAVKAVMDDDSEVGKDARQNHAELREFLISPGLENSYVDGFVQEL 362 (369)
Q Consensus 304 ~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~v~~l 362 (369)
+.+++.+++..+.. ++...|++|+++.++.++.+--..+++.+-+..+
T Consensus 290 --------~~~e~~~~i~~l~~---~~~~~m~~na~~~a~~~~~~~f~k~~l~~~~~~~ 337 (339)
T 3rhz_A 290 --------DVEEAIMKVKNVNE---DEYIELVKNVRSFNPILRKGFFTRRLLTESVFQA 337 (339)
T ss_dssp --------SHHHHHHHHHHCCH---HHHHHHHHHHHHHTHHHHTTHHHHHHHHHHHHHH
T ss_pred --------CHHHHHHHHHHhCH---HHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHh
Confidence 34688888887653 3367899999999999986655566665555443
No 51
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=96.90 E-value=0.011 Score=57.10 Aligned_cols=161 Identities=9% Similarity=-0.038 Sum_probs=87.8
Q ss_pred eEEEeeCCCcc-CCHHHHHHHHHHHHhcCCcEEEEECCCCCCCccccCCchhHHHHhc--CCCee-EecccCh--HHhhc
Q 017557 177 LIFCALGSECV-LKKDQFQELILGFELTGLPFFAALKPPTGHDTIESALPEGFEERVK--GRGFV-HGGWVQQ--QLILK 250 (369)
Q Consensus 177 ~v~vs~GS~~~-~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~--~~~~~-v~~~~pq--~~lL~ 250 (369)
.+++..|.... ...+.+-+.+..+...+.+++++-... ..+-+.+.+... +.++. +.++... ..+++
T Consensus 293 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~-------~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~ 365 (485)
T 2qzs_A 293 PLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGD-------PVLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIMG 365 (485)
T ss_dssp CEEEEEEEESGGGCHHHHHHHHHHHHHTTCEEEEEEEEC-------HHHHHHHHHHHHHSTTTEEEEESCCHHHHHHHHH
T ss_pred eEEEEeccCccccCHHHHHHHHHHHhhCCcEEEEEeCCc-------hHHHHHHHHHHHhCCCcEEEeCCCCHHHHHHHHH
Confidence 55666676653 223333343444433466666553221 011112222221 25775 6777333 35789
Q ss_pred CCCccceeec----CCCchHHHHHHhCCcccccccccchhHHHHHHhhhc--------ceEEEEeecCCCCccCHHHHHH
Q 017557 251 HPSVGCFVTH----CGSGSLSEAMVNECQLVLLPNVGDQIINSRLMGEDL--------KVGVEVERGDEDGLFTRDGVCK 318 (369)
Q Consensus 251 ~~~~~~~ItH----gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~--------g~G~~l~~~~~~~~~~~~~l~~ 318 (369)
.+++ ||.- |..+++.||+++|+|+|+-.. ..+...+.+.. +.|+.++. -+.+++.+
T Consensus 366 ~adv--~v~pS~~E~~g~~~lEAma~G~PvI~s~~----gg~~e~v~~~~~~~~~~~~~~G~l~~~------~d~~~la~ 433 (485)
T 2qzs_A 366 GADV--ILVPSRFEPCGLTQLYGLKYGTLPLVRRT----GGLADTVSDCSLENLADGVASGFVFED------SNAWSLLR 433 (485)
T ss_dssp HCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCBCCHHHHHTTCCCBEEECS------SSHHHHHH
T ss_pred hCCE--EEECCccCCCcHHHHHHHHCCCCEEECCC----CCccceeccCccccccccccceEEECC------CCHHHHHH
Confidence 9999 6632 334688999999999999754 23333333210 37888775 36899999
Q ss_pred HHHHHh---ccCCcchHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q 017557 319 AVKAVM---DDDSEVGKDARQNHAELREFLISPGLENSYVDGFVQELH 363 (369)
Q Consensus 319 ai~~ll---~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~v~~l~ 363 (369)
+|.+++ . ++..+++..+-+. ++.-+-...++.+.+...
T Consensus 434 ~i~~ll~~~~-----~~~~~~~~~~~~~--~~~fs~~~~~~~~~~ly~ 474 (485)
T 2qzs_A 434 AIRRAFVLWS-----RPSLWRFVQRQAM--AMDFSWQVAAKSYRELYY 474 (485)
T ss_dssp HHHHHHHHHT-----SHHHHHHHHHHHH--HCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcC-----CHHHHHHHHHHHH--hhcCCHHHHHHHHHHHHH
Confidence 999999 5 4444443332221 233343444455544443
No 52
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=96.55 E-value=0.0046 Score=58.27 Aligned_cols=96 Identities=8% Similarity=0.101 Sum_probs=67.8
Q ss_pred CeeEecccC-hHHhhcCCCccceeec-----CCCchHHHHHHhCCcccccccccchhHHHHHHhhhcceEEEEeecCCCC
Q 017557 236 GFVHGGWVQ-QQLILKHPSVGCFVTH-----CGSGSLSEAMVNECQLVLLPNVGDQIINSRLMGEDLKVGVEVERGDEDG 309 (369)
Q Consensus 236 ~~~v~~~~p-q~~lL~~~~~~~~ItH-----gG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~ 309 (369)
++.+.++.. -..+++.+++ |+.- +|..++.||+++|+|+|+-|..++.......+.+. |.++...
T Consensus 261 ~v~~~~~~~dl~~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~-G~l~~~~------ 331 (374)
T 2xci_A 261 DVILVDRFGILKELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKE-GAGFEVK------ 331 (374)
T ss_dssp SEEECCSSSCHHHHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHT-TCEEECC------
T ss_pred cEEEECCHHHHHHHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHC-CCEEEeC------
Confidence 455555443 3568888888 6541 24578999999999999877766666666666666 8776552
Q ss_pred ccCHHHHHHHHHHHhccCCcchHHHHHHHHHHHHH
Q 017557 310 LFTRDGVCKAVKAVMDDDSEVGKDARQNHAELREF 344 (369)
Q Consensus 310 ~~~~~~l~~ai~~ll~~~~~~~~~~~~~a~~l~~~ 344 (369)
+.++|.++|.+++++ +....+.+++++..+.
T Consensus 332 --d~~~La~ai~~ll~d--~~r~~mg~~ar~~~~~ 362 (374)
T 2xci_A 332 --NETELVTKLTELLSV--KKEIKVEEKSREIKGC 362 (374)
T ss_dssp --SHHHHHHHHHHHHHS--CCCCCHHHHHHHHHHH
T ss_pred --CHHHHHHHHHHHHhH--HHHHHHHHHHHHHHHh
Confidence 568999999999983 3345677777766544
No 53
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=95.27 E-value=0.05 Score=51.84 Aligned_cols=84 Identities=12% Similarity=0.012 Sum_probs=57.8
Q ss_pred CCeeEecccChH---HhhcCCCccceee--c-CCC-chHHHHHHhCCcccccccccchhHHHHHHhhhcceEEEEeecCC
Q 017557 235 RGFVHGGWVQQQ---LILKHPSVGCFVT--H-CGS-GSLSEAMVNECQLVLLPNVGDQIINSRLMGEDLKVGVEVERGDE 307 (369)
Q Consensus 235 ~~~~v~~~~pq~---~lL~~~~~~~~It--H-gG~-~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~ 307 (369)
.++...+++|+. .+++.+++ ||. + =|. .++.||+++|+|+|+ -..+ ....+++- ..|+.++..
T Consensus 295 ~~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v~~~-~~G~lv~~~-- 364 (413)
T 2x0d_A 295 IHLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLSNWH-SNIVSLEQL-- 364 (413)
T ss_dssp EEEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGGGTB-TTEEEESSC--
T ss_pred CcEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhhhcC-CCEEEeCCC--
Confidence 478888999865 47888999 664 2 133 567999999999998 3222 12344444 578888763
Q ss_pred CCccCHHHHHHHHHHHhccCCcchHHHHHH
Q 017557 308 DGLFTRDGVCKAVKAVMDDDSEVGKDARQN 337 (369)
Q Consensus 308 ~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~ 337 (369)
+++++.++|.++++ ++..+++
T Consensus 365 ----d~~~la~ai~~ll~-----~~~~~~~ 385 (413)
T 2x0d_A 365 ----NPENIAETLVELCM-----SFNNRDV 385 (413)
T ss_dssp ----SHHHHHHHHHHHHH-----HTC----
T ss_pred ----CHHHHHHHHHHHHc-----CHHHHHH
Confidence 68999999999998 5555544
No 54
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=94.33 E-value=0.77 Score=45.16 Aligned_cols=135 Identities=10% Similarity=-0.036 Sum_probs=76.3
Q ss_pred eEEEeeCCCcc-CCHHHHHHHHHHHHhcCCcEEEEECCCCCCCccccCCchhHHH--HhcCCCeeEecccChH---Hhhc
Q 017557 177 LIFCALGSECV-LKKDQFQELILGFELTGLPFFAALKPPTGHDTIESALPEGFEE--RVKGRGFVHGGWVQQQ---LILK 250 (369)
Q Consensus 177 ~v~vs~GS~~~-~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~--~~~~~~~~v~~~~pq~---~lL~ 250 (369)
.+++..|.... ...+.+.+.+..+...+.+++++.... ......+.. .....++.+..+.+.. .+++
T Consensus 328 p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~~l~l~G~G~-------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 400 (536)
T 3vue_A 328 PLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGK-------KKFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIMA 400 (536)
T ss_dssp CEEEEECCBSGGGCHHHHHHHHHHHTTSSCEEEEECCBC-------HHHHHHHHHHHHHSTTTEEEECSCCHHHHHHHHH
T ss_pred cEEEEEeeccccCChHHHHHHHHHhHhhCCeEEEEeccC-------chHHHHHHHHHhhcCCceEEEEeccHHHHHHHHH
Confidence 45555666653 223334444444444566666553221 111111111 1124577777777654 4788
Q ss_pred CCCccceeecC---C-CchHHHHHHhCCcccccccccchhHHHHHHhhhcceEEEEeecCCCC-c---cCHHHHHHHHHH
Q 017557 251 HPSVGCFVTHC---G-SGSLSEAMVNECQLVLLPNVGDQIINSRLMGEDLKVGVEVERGDEDG-L---FTRDGVCKAVKA 322 (369)
Q Consensus 251 ~~~~~~~ItHg---G-~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~-~---~~~~~l~~ai~~ 322 (369)
.+++ ||.=. | ..+++||+++|+|+|+-.. .-....+.+- ..|......+.++ . .+.+.+.++|++
T Consensus 401 ~aD~--~v~PS~~E~fgl~~lEAma~G~PvI~s~~----gG~~e~V~dg-~~G~~~~~~~~~g~l~~~~d~~~la~ai~r 473 (536)
T 3vue_A 401 GADV--LAVPSRFEPCGLIQLQGMRYGTPCACAST----GGLVDTVIEG-KTGFHMGRLSVDCKVVEPSDVKKVAATLKR 473 (536)
T ss_dssp HCSE--EEECCSCCSSCSHHHHHHHTTCCEEECSC----THHHHHCCBT-TTEEECCCCCSCTTCCCHHHHHHHHHHHHH
T ss_pred hhhe--eecccccCCCCHHHHHHHHcCCCEEEcCC----CCchheeeCC-CCccccccCCCceeEECCCCHHHHHHHHHH
Confidence 8888 76421 2 2588999999999998643 4455566666 6777555432122 1 246789999988
Q ss_pred Hhc
Q 017557 323 VMD 325 (369)
Q Consensus 323 ll~ 325 (369)
++.
T Consensus 474 al~ 476 (536)
T 3vue_A 474 AIK 476 (536)
T ss_dssp HHH
T ss_pred HHH
Confidence 774
No 55
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=92.44 E-value=0.22 Score=46.13 Aligned_cols=97 Identities=16% Similarity=0.224 Sum_probs=60.1
Q ss_pred CCceEEEeeCCCcc---CCHHHHHHHHHHHHhcCCcEEEEECCCCCCCccccCCchhHHHHhcCCCeeEecccC---hHH
Q 017557 174 AKSLIFCALGSECV---LKKDQFQELILGFELTGLPFFAALKPPTGHDTIESALPEGFEERVKGRGFVHGGWVQ---QQL 247 (369)
Q Consensus 174 ~~~~v~vs~GS~~~---~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~p---q~~ 247 (369)
++++|.+.-||... ++.+.+.++++.|.+.++++++ ++... ...+.+.+.+......+.+.+-.. ...
T Consensus 184 ~~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl-~g~~~-----e~~~~~~i~~~~~~~~~~l~g~~sl~e~~a 257 (349)
T 3tov_A 184 TDILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVF-FGGPM-----DLEMVQPVVEQMETKPIVATGKFQLGPLAA 257 (349)
T ss_dssp TCCEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEE-CCCTT-----THHHHHHHHHTCSSCCEECTTCCCHHHHHH
T ss_pred CCCEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEE-EeCcc-----hHHHHHHHHHhcccccEEeeCCCCHHHHHH
Confidence 45688888888543 6678899999999777888877 44321 111111222222222233333322 345
Q ss_pred hhcCCCccceeecCCCchHHHHHHhCCccccc
Q 017557 248 ILKHPSVGCFVTHCGSGSLSEAMVNECQLVLL 279 (369)
Q Consensus 248 lL~~~~~~~~ItHgG~~s~~Eal~~GvP~i~~ 279 (369)
+++++++ +|+.-. |.++=|.+.|+|+|++
T Consensus 258 li~~a~~--~i~~Ds-G~~HlAaa~g~P~v~l 286 (349)
T 3tov_A 258 AMNRCNL--LITNDS-GPMHVGISQGVPIVAL 286 (349)
T ss_dssp HHHTCSE--EEEESS-HHHHHHHTTTCCEEEE
T ss_pred HHHhCCE--EEECCC-CHHHHHHhcCCCEEEE
Confidence 8999999 999832 3444488899999986
No 56
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=90.69 E-value=2.7 Score=36.15 Aligned_cols=153 Identities=9% Similarity=0.049 Sum_probs=88.1
Q ss_pred CceEEEeeCCCccCCHHHHHHHHHHHHhcCCcEEEEECCCCCCCccccCCchhHHHHhcCCCeeEecccChHHhhcCCCc
Q 017557 175 KSLIFCALGSECVLKKDQFQELILGFELTGLPFFAALKPPTGHDTIESALPEGFEERVKGRGFVHGGWVQQQLILKHPSV 254 (369)
Q Consensus 175 ~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~~ 254 (369)
++++.|..|.++ ...++.|...+..+.++... +.+.+.+.....++......-+..-|..+++
T Consensus 32 k~VLVVGgG~va-------~~ka~~Ll~~GA~VtVvap~----------~~~~l~~l~~~~~i~~i~~~~~~~dL~~adL 94 (223)
T 3dfz_A 32 RSVLVVGGGTIA-------TRRIKGFLQEGAAITVVAPT----------VSAEINEWEAKGQLRVKRKKVGEEDLLNVFF 94 (223)
T ss_dssp CCEEEECCSHHH-------HHHHHHHGGGCCCEEEECSS----------CCHHHHHHHHTTSCEEECSCCCGGGSSSCSE
T ss_pred CEEEEECCCHHH-------HHHHHHHHHCCCEEEEECCC----------CCHHHHHHHHcCCcEEEECCCCHhHhCCCCE
Confidence 557777777655 55667777788888777432 1223333333334544333233445677777
Q ss_pred cceeecCCCchHHHHHHhCCccccccc-ccchhHHHH-----HHhhhcceEEEEeecCCCCccCHHHHHHHHHHHhccCC
Q 017557 255 GCFVTHCGSGSLSEAMVNECQLVLLPN-VGDQIINSR-----LMGEDLKVGVEVERGDEDGLFTRDGVCKAVKAVMDDDS 328 (369)
Q Consensus 255 ~~~ItHgG~~s~~Eal~~GvP~i~~P~-~~DQ~~na~-----~v~~~~g~G~~l~~~~~~~~~~~~~l~~ai~~ll~~~~ 328 (369)
+|.--|--.+.+.++.-.- ..+|. ..|.+..+. .+.+- ++-+.+..+. ....-+..|++.|++.+.
T Consensus 95 --VIaAT~d~~~N~~I~~~ak-~gi~VNvvD~p~~~~f~~Paiv~rg-~l~iaIST~G-~sP~la~~iR~~ie~~lp--- 166 (223)
T 3dfz_A 95 --IVVATNDQAVNKFVKQHIK-NDQLVNMASSFSDGNIQIPAQFSRG-RLSLAISTDG-ASPLLTKRIKEDLSSNYD--- 166 (223)
T ss_dssp --EEECCCCTHHHHHHHHHSC-TTCEEEC-----CCSEECCEEEEET-TEEEEEECTT-SCHHHHHHHHHHHHHHSC---
T ss_pred --EEECCCCHHHHHHHHHHHh-CCCEEEEeCCcccCeEEEeeEEEeC-CEEEEEECCC-CCcHHHHHHHHHHHHHcc---
Confidence 8888888788777775444 56665 346655543 23333 4445554432 122335667888877774
Q ss_pred cchHHHHHHHHHHHHHHhcCCCCH
Q 017557 329 EVGKDARQNHAELREFLISPGLEN 352 (369)
Q Consensus 329 ~~~~~~~~~a~~l~~~~~~~~~~~ 352 (369)
+.-..+-+.+.++++.+++.....
T Consensus 167 ~~~~~~~~~~~~~R~~vk~~~~~~ 190 (223)
T 3dfz_A 167 ESYTQYTQFLYECRVLIHRLNVSK 190 (223)
T ss_dssp THHHHHHHHHHHHHHHHHHCCSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCH
Confidence 224678888999999988754443
No 57
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=88.95 E-value=0.73 Score=42.11 Aligned_cols=97 Identities=15% Similarity=0.080 Sum_probs=59.3
Q ss_pred CCceEEEeeCC-C-c--cCCHHHHHHHHHHHHhcCCcEEEEECCCCCCCccccCCchhHHHHhc---CCCe-eEecccC-
Q 017557 174 AKSLIFCALGS-E-C--VLKKDQFQELILGFELTGLPFFAALKPPTGHDTIESALPEGFEERVK---GRGF-VHGGWVQ- 244 (369)
Q Consensus 174 ~~~~v~vs~GS-~-~--~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~---~~~~-~v~~~~p- 244 (369)
+++.|.+.-|| . . .++.+.+.++++.|...++++++. +... ...+-+.+.+... ..++ .+.+..+
T Consensus 179 ~~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~-g~~~-----e~~~~~~i~~~~~~~~~~~~~~l~g~~sl 252 (348)
T 1psw_A 179 ERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLF-GSAK-----DHEAGNEILAALNTEQQAWCRNLAGETQL 252 (348)
T ss_dssp SSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEEC-CCGG-----GHHHHHHHHTTSCHHHHTTEEECTTTSCH
T ss_pred CCcEEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEE-eChh-----hHHHHHHHHHhhhhccccceEeccCcCCH
Confidence 45688888888 3 2 266788999999987668887765 3321 1111111111110 0123 2333332
Q ss_pred --hHHhhcCCCccceeecCCCchHHHHHHhCCccccc
Q 017557 245 --QQLILKHPSVGCFVTHCGSGSLSEAMVNECQLVLL 279 (369)
Q Consensus 245 --q~~lL~~~~~~~~ItHgG~~s~~Eal~~GvP~i~~ 279 (369)
...+++++++ +|+.- .|+++-|.+.|+|+|++
T Consensus 253 ~e~~ali~~a~l--~I~~D-sg~~HlAaa~g~P~v~l 286 (348)
T 1psw_A 253 DQAVILIAACKA--IVTND-SGLMHVAAALNRPLVAL 286 (348)
T ss_dssp HHHHHHHHTSSE--EEEES-SHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHhCCE--EEecC-CHHHHHHHHcCCCEEEE
Confidence 2568999999 99973 45677799999999986
No 58
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=86.70 E-value=0.21 Score=45.54 Aligned_cols=134 Identities=11% Similarity=0.026 Sum_probs=75.9
Q ss_pred CCceEEEeeCCCcc---CCHHHHHHHHHHHHhcCCcEEEEECCCCCCCccccCCchhHHHHhcCCCeeEecccC---hHH
Q 017557 174 AKSLIFCALGSECV---LKKDQFQELILGFELTGLPFFAALKPPTGHDTIESALPEGFEERVKGRGFVHGGWVQ---QQL 247 (369)
Q Consensus 174 ~~~~v~vs~GS~~~---~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~p---q~~ 247 (369)
+++.|.+.-|+... ++.+.+.++++.|.+.++++++..+... ...+.+.+.+. -+++.+.+-.+ -..
T Consensus 177 ~~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~~-----e~~~~~~i~~~--~~~~~l~g~~sl~el~a 249 (326)
T 2gt1_A 177 AGEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAPH-----EEERAKRLAEG--FAYVEVLPKMSLEGVAR 249 (326)
T ss_dssp TTSEEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSHH-----HHHHHHHHHTT--CTTEEECCCCCHHHHHH
T ss_pred CCCEEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCHH-----HHHHHHHHHhh--CCcccccCCCCHHHHHH
Confidence 35578888887543 6678899999998766787776644321 11111111111 12343333322 345
Q ss_pred hhcCCCccceeec-CCCchHHHHHHhCCccccc--ccccchhHHHHHHhhhcceE-EEEeec-CCCCccCHHHHHHHHHH
Q 017557 248 ILKHPSVGCFVTH-CGSGSLSEAMVNECQLVLL--PNVGDQIINSRLMGEDLKVG-VEVERG-DEDGLFTRDGVCKAVKA 322 (369)
Q Consensus 248 lL~~~~~~~~ItH-gG~~s~~Eal~~GvP~i~~--P~~~DQ~~na~~v~~~~g~G-~~l~~~-~~~~~~~~~~l~~ai~~ 322 (369)
+++++++ +|+. .|. ++=|.+.|+|+|++ |..... ++ -||-. ..+... .-=..++++++.+++++
T Consensus 250 li~~a~l--~I~~DSG~--~HlAaa~g~P~v~lfg~t~p~~--~~-----P~~~~~~~~~~~~~cm~~I~~~~V~~~i~~ 318 (326)
T 2gt1_A 250 VLAGAKF--VVSVDTGL--SHLTAALDRPNITVYGPTDPGL--IG-----GYGKNQMVCRAPGNELSQLTANAVKQFIEE 318 (326)
T ss_dssp HHHTCSE--EEEESSHH--HHHHHHTTCCEEEEESSSCHHH--HC-----CCSSSEEEEECGGGCGGGCCHHHHHHHHHH
T ss_pred HHHhCCE--EEecCCcH--HHHHHHcCCCEEEEECCCChhh--cC-----CCCCCceEecCCcccccCCCHHHHHHHHHH
Confidence 8999999 9998 543 33366799999998 321111 00 01211 112110 00012899999999999
Q ss_pred Hhc
Q 017557 323 VMD 325 (369)
Q Consensus 323 ll~ 325 (369)
++.
T Consensus 319 ~l~ 321 (326)
T 2gt1_A 319 NAE 321 (326)
T ss_dssp TTT
T ss_pred HHH
Confidence 996
No 59
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=84.89 E-value=9.3 Score=36.82 Aligned_cols=109 Identities=18% Similarity=0.274 Sum_probs=66.4
Q ss_pred ee-EecccChHH---hhcCCCccceee---cCCCc-hHHHHHHhCC-----cccccccccchhHHHHHHhhhcceEEEEe
Q 017557 237 FV-HGGWVQQQL---ILKHPSVGCFVT---HCGSG-SLSEAMVNEC-----QLVLLPNVGDQIINSRLMGEDLKVGVEVE 303 (369)
Q Consensus 237 ~~-v~~~~pq~~---lL~~~~~~~~It---HgG~~-s~~Eal~~Gv-----P~i~~P~~~DQ~~na~~v~~~~g~G~~l~ 303 (369)
++ +.+++++.+ +++.+++ |+. +=|+| ++.||+++|+ |+|+--..+- +..+ ..|+.++
T Consensus 333 v~~~~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~----~~~l----~~g~lv~ 402 (482)
T 1uqt_A 333 LYYLNQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGA----ANEL----TSALIVN 402 (482)
T ss_dssp EEEECSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGG----GGTC----TTSEEEC
T ss_pred EEEeCCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCC----HHHh----CCeEEEC
Confidence 44 457777654 7788888 664 33565 7889999998 6665443221 1111 2356666
Q ss_pred ecCCCCccCHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhc
Q 017557 304 RGDEDGLFTRDGVCKAVKAVMDDDSEVGKDARQNHAELREFLISPGLENSYVDGFVQELHSL 365 (369)
Q Consensus 304 ~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~v~~l~~~ 365 (369)
. .+.+.+.++|.++|++ . .+.-+++.++..+.+++ -+..+-++.+++.+.+.
T Consensus 403 p------~d~~~lA~ai~~lL~~--~-~~~r~~~~~~~~~~v~~-~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 403 P------YDRDEVAAALDRALTM--S-LAERISRHAEMLDVIVK-NDINHWQECFISDLKQI 454 (482)
T ss_dssp T------TCHHHHHHHHHHHHTC--C-HHHHHHHHHHHHHHHHH-TCHHHHHHHHHHHHHHS
T ss_pred C------CCHHHHHHHHHHHHcC--C-HHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHhc
Confidence 5 4689999999999972 1 12334444555555543 34555567777766543
No 60
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=78.33 E-value=6.9 Score=39.53 Aligned_cols=35 Identities=9% Similarity=-0.168 Sum_probs=26.4
Q ss_pred HHhhcCCCccceeec---CCC-chHHHHHHhCCcccccccc
Q 017557 246 QLILKHPSVGCFVTH---CGS-GSLSEAMVNECQLVLLPNV 282 (369)
Q Consensus 246 ~~lL~~~~~~~~ItH---gG~-~s~~Eal~~GvP~i~~P~~ 282 (369)
..+++.+++ ||.= =|+ .+++||+++|+|+|+--..
T Consensus 513 ~~~~~~adv--fV~PS~~EgfGl~~LEAmA~G~PvI~s~~g 551 (725)
T 3nb0_A 513 DEFVRGCHL--GVFPSYYEPWGYTPAECTVMGVPSITTNVS 551 (725)
T ss_dssp HHHHHHCSE--EECCCSSBSSCHHHHHHHHTTCCEEEETTB
T ss_pred HHHHhhceE--EEeccccCCCCHHHHHHHHcCCCEEEeCCC
Confidence 458889999 6643 244 4889999999999986553
No 61
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=77.94 E-value=15 Score=30.12 Aligned_cols=134 Identities=17% Similarity=0.135 Sum_probs=68.2
Q ss_pred hhHHHhhhccCCCCceEEEeeCC-CccCCHHHHHHHHHHHHhcCCcEEEEECCCCCCCccccCCchhHHHHhcCCCeeEe
Q 017557 162 EEEFEMLFSSFKAKSLIFCALGS-ECVLKKDQFQELILGFELTGLPFFAALKPPTGHDTIESALPEGFEERVKGRGFVHG 240 (369)
Q Consensus 162 ~~~~~~~l~~~~~~~~v~vs~GS-~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~ 240 (369)
..++-++|.+.+ ...|+.|. .+- +.+..++..+.+-++|-++.... ..++..+. ....+.
T Consensus 34 A~~lg~~La~~g---~~lVsGGg~~Gi-----m~aa~~gAl~~gG~tigVlP~~~------~~~~~~~~-----~~~i~~ 94 (176)
T 2iz6_A 34 ANELGKQIATHG---WILLTGGRSLGV-----MHEAMKGAKEAGGTTIGVLPGPD------TSEISDAV-----DIPIVT 94 (176)
T ss_dssp HHHHHHHHHHTT---CEEEEECSSSSH-----HHHHHHHHHHTTCCEEEEECC-----------CCTTC-----SEEEEC
T ss_pred HHHHHHHHHHCC---CEEEECCCccCH-----hHHHHHHHHHcCCEEEEEeCchh------hhhhccCC-----ceeEEc
Confidence 456677777643 77777777 542 23444444445556666654320 11111110 013344
Q ss_pred cccChHH--hhcCCCccceeecCCCchHHH---HHHhCCcccccccccchhHHHHHHhhhcceEEEEeecCCCCccCHHH
Q 017557 241 GWVQQQL--ILKHPSVGCFVTHCGSGSLSE---AMVNECQLVLLPNVGDQIINSRLMGEDLKVGVEVERGDEDGLFTRDG 315 (369)
Q Consensus 241 ~~~pq~~--lL~~~~~~~~ItHgG~~s~~E---al~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~~ 315 (369)
+..++.. +...++. .++--||.||+.| ++.+++|++.+|.+. ....++... ........ -++++
T Consensus 95 ~~~~~Rk~~m~~~sda-~IvlpGg~GTL~E~~~al~~~kpV~~l~~~~---~~~gfi~~~-~~~~i~~~------~~~~e 163 (176)
T 2iz6_A 95 GLGSARDNINALSSNV-LVAVGMGPGTAAEVALALKAKKPVVLLGTQP---EAEKFFTSL-DAGLVHVA------ADVAG 163 (176)
T ss_dssp CCCSSSCCCCGGGCSE-EEEESCCHHHHHHHHHHHHTTCCEEEESCCH---HHHHHHHHH-CTTTEEEE------SSHHH
T ss_pred CCHHHHHHHHHHhCCE-EEEecCCccHHHHHHHHHHhCCcEEEEcCcc---cccccCChh-hcCeEEEc------CCHHH
Confidence 5555433 3334443 4556688887665 467999999999843 111222222 22222222 25677
Q ss_pred HHHHHHHHhc
Q 017557 316 VCKAVKAVMD 325 (369)
Q Consensus 316 l~~ai~~ll~ 325 (369)
+.+.+++.+.
T Consensus 164 ~~~~l~~~~~ 173 (176)
T 2iz6_A 164 AIAAVKQLLA 173 (176)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 7777766553
No 62
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=75.96 E-value=29 Score=27.89 Aligned_cols=137 Identities=7% Similarity=0.024 Sum_probs=76.3
Q ss_pred ceEEEeeCCCccCCHHHHHHHHHHHHhcCCcEEEEECCCCCCCccccCCchhHHHHhcCCCeeEecccChHHhhcCCCcc
Q 017557 176 SLIFCALGSECVLKKDQFQELILGFELTGLPFFAALKPPTGHDTIESALPEGFEERVKGRGFVHGGWVQQQLILKHPSVG 255 (369)
Q Consensus 176 ~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~~~ 255 (369)
+.|-|-+||.. +....++..+.|+..+.++-+.+-+ .+..|+.+.+.. .... ..-..+
T Consensus 3 ~~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~s-------aHR~p~~~~~~~-----------~~a~--~~~~~~ 60 (159)
T 3rg8_A 3 PLVIILMGSSS--DMGHAEKIASELKTFGIEYAIRIGS-------AHKTAEHVVSML-----------KEYE--ALDRPK 60 (159)
T ss_dssp CEEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECC-------TTTCHHHHHHHH-----------HHHH--TSCSCE
T ss_pred CeEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEc-------ccCCHHHHHHHH-----------HHhh--hcCCCc
Confidence 35777788876 5566778888888888876665543 355666544321 1111 111234
Q ss_pred ceeecCCCchHHHHH---HhCCccccccccc---chhHHHHHHhh--hcceEEEEeecCCCCccCHHHHHHHHHHHhccC
Q 017557 256 CFVTHCGSGSLSEAM---VNECQLVLLPNVG---DQIINSRLMGE--DLKVGVEVERGDEDGLFTRDGVCKAVKAVMDDD 327 (369)
Q Consensus 256 ~~ItHgG~~s~~Eal---~~GvP~i~~P~~~---DQ~~na~~v~~--~~g~G~~l~~~~~~~~~~~~~l~~ai~~ll~~~ 327 (369)
+||.=.|...-.-++ ..-+|+|++|... +..+ -.-+.+ . |+.+.--. +-.++..+...|-.+ .
T Consensus 61 ViIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~d-LlS~vqmp~-GvpVatv~----~~~nAa~lA~~Il~~-~-- 131 (159)
T 3rg8_A 61 LYITIAGRSNALSGFVDGFVKGATIACPPPSDSFAGAD-IYSSLRMPS-GISPALVL----EPKNAALLAARIFSL-Y-- 131 (159)
T ss_dssp EEEEECCSSCCHHHHHHHHSSSCEEECCCCCCGGGGTH-HHHHHCCCT-TCCCEECC----SHHHHHHHHHHHHTT-T--
T ss_pred EEEEECCchhhhHHHHHhccCCCEEEeeCCCCCCCCcc-HHHHHhCCC-CCceEEec----CchHHHHHHHHHHhC-C--
Confidence 488888865444333 3568999999742 1222 111222 2 43332111 124555555555322 3
Q ss_pred CcchHHHHHHHHHHHHHHh
Q 017557 328 SEVGKDARQNHAELREFLI 346 (369)
Q Consensus 328 ~~~~~~~~~~a~~l~~~~~ 346 (369)
|+.++++.+..++...
T Consensus 132 ---d~~l~~kl~~~r~~~~ 147 (159)
T 3rg8_A 132 ---DKEIADSVKSYMESNA 147 (159)
T ss_dssp ---CHHHHHHHHHHHHHHH
T ss_pred ---CHHHHHHHHHHHHHHH
Confidence 6888888888877665
No 63
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=75.50 E-value=31 Score=28.00 Aligned_cols=142 Identities=15% Similarity=0.144 Sum_probs=80.6
Q ss_pred CceEEEeeCCCccCCHHHHHHHHHHHHhcCCcEEEEECCCCCCCccccCCchhHHHHhcCCCeeEecccChHHhhcCCCc
Q 017557 175 KSLIFCALGSECVLKKDQFQELILGFELTGLPFFAALKPPTGHDTIESALPEGFEERVKGRGFVHGGWVQQQLILKHPSV 254 (369)
Q Consensus 175 ~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~~ 254 (369)
+|.|-|-+||.. +....++..+.|+..+.++-+.+-+ ....|+.+.+..+ + ...-.+
T Consensus 11 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~S-------aHR~p~~l~~~~~-----------~---a~~~g~ 67 (170)
T 1xmp_A 11 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVS-------AHRTPDYMFEYAE-----------T---ARERGL 67 (170)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECC-------TTTSHHHHHHHHH-----------H---TTTTTC
T ss_pred CCcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEe-------ccCCHHHHHHHHH-----------H---HHhCCC
Confidence 567888888887 5677778888888888886665543 3556665443211 0 011112
Q ss_pred cceeecCCCchHHHHHH---hCCcccccccccc--hhHHH-HHHhh--hcceEEE-EeecCCCCccCHHHHHHHHHHHhc
Q 017557 255 GCFVTHCGSGSLSEAMV---NECQLVLLPNVGD--QIINS-RLMGE--DLKVGVE-VERGDEDGLFTRDGVCKAVKAVMD 325 (369)
Q Consensus 255 ~~~ItHgG~~s~~Eal~---~GvP~i~~P~~~D--Q~~na-~~v~~--~~g~G~~-l~~~~~~~~~~~~~l~~ai~~ll~ 325 (369)
++||.=.|...-.-.+. .-+|+|++|.... +...+ .-+.+ . |+.+. +..++ .+-.++..+...|-. +.
T Consensus 68 ~ViIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~daLlSivqmP~-GvpVatV~I~~-a~~~nAallAaqIla-~~ 144 (170)
T 1xmp_A 68 KVIIAGAGGAAHLPGMVAAKTNLPVIGVPVQSKALNGLDSLLSIVQMPG-GVPVATVAIGK-AGSTNAGLLAAQILG-SF 144 (170)
T ss_dssp CEEEEEEESSCCHHHHHHTTCCSCEEEEEECCTTTTTHHHHHHHHCCCT-TCCCEECCSSH-HHHHHHHHHHHHHHH-TT
T ss_pred cEEEEECCchhhhHHHHHhccCCCEEEeeCCCCCCCcHHHHHHHhcCCC-CCeeEEEecCC-cchHHHHHHHHHHHc-cC
Confidence 33888777654444433 4589999998542 22222 22333 3 55421 11110 012455566655542 34
Q ss_pred cCCcchHHHHHHHHHHHHHHhc
Q 017557 326 DDSEVGKDARQNHAELREFLIS 347 (369)
Q Consensus 326 ~~~~~~~~~~~~a~~l~~~~~~ 347 (369)
++.++++.+..++.+++
T Consensus 145 -----d~~l~~kl~~~r~~~~~ 161 (170)
T 1xmp_A 145 -----HDDIHDALELRREAIEK 161 (170)
T ss_dssp -----CHHHHHHHHHHHHHHHH
T ss_pred -----CHHHHHHHHHHHHHHHH
Confidence 68899988888887764
No 64
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=73.77 E-value=36 Score=27.91 Aligned_cols=142 Identities=12% Similarity=0.077 Sum_probs=78.4
Q ss_pred CceEEEeeCCCccCCHHHHHHHHHHHHhcCCcEEEEECCCCCCCccccCCchhHHHHhcCCCeeEecccChHHhhcCCCc
Q 017557 175 KSLIFCALGSECVLKKDQFQELILGFELTGLPFFAALKPPTGHDTIESALPEGFEERVKGRGFVHGGWVQQQLILKHPSV 254 (369)
Q Consensus 175 ~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~~ 254 (369)
++.|-|-+||.. +...+++..+.|++.+.++-+.+-+ .+..|+.+.+..+ -...-.+
T Consensus 22 kp~V~IimGS~S--D~~v~~~a~~~L~~~gI~~e~~V~S-------AHRtp~~l~~~~~--------------~a~~~g~ 78 (181)
T 4b4k_A 22 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVS-------AHRTPDYMFEYAE--------------TARERGL 78 (181)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECC-------TTTSHHHHHHHHH--------------HTTTTTC
T ss_pred CccEEEEECCHh--HHHHHHHHHHHHHHcCCCeeEEEEc-------cccChHHHHHHHH--------------HHHhcCc
Confidence 567888899987 5567788888888888887666544 3556665443221 0111223
Q ss_pred cceeecCCCchHHHH---HHhCCccccccccc---chhHHHHHHhhhcceEEEEeecCC--CCccCHHHHHHHHHHHhcc
Q 017557 255 GCFVTHCGSGSLSEA---MVNECQLVLLPNVG---DQIINSRLMGEDLKVGVEVERGDE--DGLFTRDGVCKAVKAVMDD 326 (369)
Q Consensus 255 ~~~ItHgG~~s~~Ea---l~~GvP~i~~P~~~---DQ~~na~~v~~~~g~G~~l~~~~~--~~~~~~~~l~~ai~~ll~~ 326 (369)
+++|.=.|...-.-. -..-+|+|++|... +-.+.---+.+. -.|+-+-.-.- .+-.++.-+...|-. +.
T Consensus 79 ~ViIa~AG~aahLpGvvAa~T~~PVIGVPv~s~~l~G~DsLlSivQM-P~GvpVaTvaig~~ga~NAallA~qILa-~~- 155 (181)
T 4b4k_A 79 KVIIAGAGGAAHLPGMVAAKTNLPVIGVPVQSKALNGLDSLLSIVQM-PGGVPVATVAIGKAGSTNAGLLAAQILG-SF- 155 (181)
T ss_dssp CEEEEEECSSCCHHHHHHTTCCSCEEEEECCCTTTTTHHHHHHHHTC-CTTCCCEECCSSHHHHHHHHHHHHHHHT-TT-
T ss_pred eEEEEeccccccchhhHHhcCCCCEEEEecCCCCccchhhHHHHHhC-CCCCceEEEecCCccHHHHHHHHHHHHc-cC-
Confidence 348877775433333 24568999999854 333333344443 33443332210 001223334433321 23
Q ss_pred CCcchHHHHHHHHHHHHHHh
Q 017557 327 DSEVGKDARQNHAELREFLI 346 (369)
Q Consensus 327 ~~~~~~~~~~~a~~l~~~~~ 346 (369)
++.++++.+..++.++
T Consensus 156 ----d~~l~~kl~~~r~~~~ 171 (181)
T 4b4k_A 156 ----HDDIHDALELRREAIE 171 (181)
T ss_dssp ----CHHHHHHHHHHHHHHH
T ss_pred ----CHHHHHHHHHHHHHHH
Confidence 6788888877776655
No 65
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=71.62 E-value=40 Score=27.50 Aligned_cols=142 Identities=11% Similarity=0.066 Sum_probs=78.9
Q ss_pred CceEEEeeCCCccCCHHHHHHHHHHHHhcCCcEEEEECCCCCCCccccCCchhHHHHhcCCCeeEecccChHHhhcCCCc
Q 017557 175 KSLIFCALGSECVLKKDQFQELILGFELTGLPFFAALKPPTGHDTIESALPEGFEERVKGRGFVHGGWVQQQLILKHPSV 254 (369)
Q Consensus 175 ~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~~ 254 (369)
++.|-|-+||.. +....++....|+..+.++-+.+-+ .+..|+.+.+.. -... -...++
T Consensus 7 ~~~V~IimgS~S--D~~v~~~a~~~L~~~gi~~ev~V~S-------aHR~p~~~~~~~-----------~~a~-~~g~~V 65 (174)
T 3lp6_A 7 RPRVGVIMGSDS--DWPVMADAAAALAEFDIPAEVRVVS-------AHRTPEAMFSYA-----------RGAA-ARGLEV 65 (174)
T ss_dssp CCSEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECC-------TTTCHHHHHHHH-----------HHHH-HHTCCE
T ss_pred CCeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEC-------CCCCHHHHHHHH-----------HHHH-hCCCCE
Confidence 446777788876 5667778888888888887665543 355666544321 1100 123344
Q ss_pred cceeecCCCchHHHHH---HhCCcccccccccc--hhHHH-HHHhhh-cceEEEEeecCCCCccCHHHHHHHHHHHhccC
Q 017557 255 GCFVTHCGSGSLSEAM---VNECQLVLLPNVGD--QIINS-RLMGED-LKVGVEVERGDEDGLFTRDGVCKAVKAVMDDD 327 (369)
Q Consensus 255 ~~~ItHgG~~s~~Eal---~~GvP~i~~P~~~D--Q~~na-~~v~~~-~g~G~~l~~~~~~~~~~~~~l~~ai~~ll~~~ 327 (369)
||.=.|...-.-++ ..-+|+|++|...- +...+ --+.+. =|+.+..-.- ++..++..+...|-.+ .
T Consensus 66 --iIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~daLlS~vqmp~GvpVatV~I--~~~~nAa~lAa~Il~~-~-- 138 (174)
T 3lp6_A 66 --IIAGAGGAAHLPGMVAAATPLPVIGVPVPLGRLDGLDSLLSIVQMPAGVPVATVSI--GGAGNAGLLAVRMLGA-A-- 138 (174)
T ss_dssp --EEEEEESSCCHHHHHHHHCSSCEEEEEECCSSGGGHHHHHHHHCCCTTCCCEECCT--TCHHHHHHHHHHHHHT-T--
T ss_pred --EEEecCchhhhHHHHHhccCCCEEEeeCCCCCCCCHHHHHHHhhCCCCCeeEEEEc--CcchHHHHHHHHHHhC-C--
Confidence 88887765433333 35689999998532 11121 112221 0432221110 1125566666555433 3
Q ss_pred CcchHHHHHHHHHHHHHHhc
Q 017557 328 SEVGKDARQNHAELREFLIS 347 (369)
Q Consensus 328 ~~~~~~~~~~a~~l~~~~~~ 347 (369)
++.++++.+..++.+++
T Consensus 139 ---d~~l~~kl~~~r~~~~~ 155 (174)
T 3lp6_A 139 ---NPQLRARIVAFQDRLAD 155 (174)
T ss_dssp ---CHHHHHHHHHHHHHHHH
T ss_pred ---CHHHHHHHHHHHHHHHH
Confidence 68899998888887763
No 66
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=70.52 E-value=42 Score=27.31 Aligned_cols=145 Identities=12% Similarity=0.112 Sum_probs=77.4
Q ss_pred CCceEEEeeCCCccCCHHHHHHHHHHHHhcCCcEEEEECCCCCCCccccCCchhHHHHhcCCCeeEecccChHHhhcCCC
Q 017557 174 AKSLIFCALGSECVLKKDQFQELILGFELTGLPFFAALKPPTGHDTIESALPEGFEERVKGRGFVHGGWVQQQLILKHPS 253 (369)
Q Consensus 174 ~~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~ 253 (369)
+.|.|-|-+||.. +....++..+.|+..+.++-+.+-+ .+..|+.+.+..+ . ...-.
T Consensus 11 ~~P~V~IimGS~S--D~~v~~~a~~~l~~~gi~~ev~V~s-------aHR~p~~l~~~~~-----------~---a~~~g 67 (173)
T 4grd_A 11 SAPLVGVLMGSSS--DWDVMKHAVAILQEFGVPYEAKVVS-------AHRMPDEMFDYAE-----------K---ARERG 67 (173)
T ss_dssp SSCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECC-------TTTSHHHHHHHHH-----------H---HTTTT
T ss_pred CCCeEEEEeCcHh--HHHHHHHHHHHHHHcCCCEEEEEEc-------cccCHHHHHHHHH-----------H---HHhcC
Confidence 3567888889887 5567778888888888886655543 3556665443211 0 11122
Q ss_pred ccceeecCCCchHHHH---HHhCCcccccccccc---hhHHHHHHhhh-cceEEEEeecCCCCccCHHHHHHHHHHHhcc
Q 017557 254 VGCFVTHCGSGSLSEA---MVNECQLVLLPNVGD---QIINSRLMGED-LKVGVEVERGDEDGLFTRDGVCKAVKAVMDD 326 (369)
Q Consensus 254 ~~~~ItHgG~~s~~Ea---l~~GvP~i~~P~~~D---Q~~na~~v~~~-~g~G~~l~~~~~~~~~~~~~l~~ai~~ll~~ 326 (369)
+++||.-.|.-.-.-+ -..-+|+|++|.... ..+--.-+.+. =|+.+..-.-..++-.++.-+...|- -+.
T Consensus 68 ~~ViIa~AG~aahLpgvvA~~t~~PVIgVPv~~~~l~G~dsLlSivqMP~Gvpvatv~i~~~~a~NAallA~~IL-a~~- 145 (173)
T 4grd_A 68 LRAIIAGAGGAAHLPGMLAAKTTVPVLGVPVASKYLKGVDSLHSIVQMPKGVPVATFAIGEAGAANAALFAVSIL-SGN- 145 (173)
T ss_dssp CSEEEEEEESSCCHHHHHHHHCCSCEEEEEECCTTTTTHHHHHHHHCCCTTSCCEECCSSHHHHHHHHHHHHHHH-TTS-
T ss_pred CeEEEEeccccccchhhheecCCCCEEEEEcCCCCCCchhHHHHHHhCCCCCCceEEecCCcchHHHHHHHHHHH-cCC-
Confidence 3337776665433322 345799999997432 22222222222 03333221100001133444444442 233
Q ss_pred CCcchHHHHHHHHHHHHHHhc
Q 017557 327 DSEVGKDARQNHAELREFLIS 347 (369)
Q Consensus 327 ~~~~~~~~~~~a~~l~~~~~~ 347 (369)
++.++++.++.++..++
T Consensus 146 ----d~~l~~kl~~~r~~~~~ 162 (173)
T 4grd_A 146 ----SVDYANRLAAFRVRQNE 162 (173)
T ss_dssp ----CHHHHHHHHHHHHHHHH
T ss_pred ----CHHHHHHHHHHHHHHHH
Confidence 78888888888777653
No 67
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=69.95 E-value=28 Score=33.62 Aligned_cols=110 Identities=13% Similarity=0.137 Sum_probs=70.3
Q ss_pred CeeEecccChH---HhhcCCCccceee---cCCCch-HHHHHHhC---CcccccccccchhHHHHHHhhhcceEEEEeec
Q 017557 236 GFVHGGWVQQQ---LILKHPSVGCFVT---HCGSGS-LSEAMVNE---CQLVLLPNVGDQIINSRLMGEDLKVGVEVERG 305 (369)
Q Consensus 236 ~~~v~~~~pq~---~lL~~~~~~~~It---HgG~~s-~~Eal~~G---vP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~ 305 (369)
.|+..+.+|+. .+++.+++ |+. +=|+|- ..|++++| .|+|.--+.+ .+..+. ..|+.++.
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv--~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aG----a~~~l~---~~allVnP- 422 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL--LIFNSTVDGQNLSTFEAPLVNERDADVILSETCG----AAEVLG---EYCRSVNP- 422 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE--EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBT----THHHHG---GGSEEECT-
T ss_pred CEEEeCCCCHHHHHHHHHhccE--EEECcccccCChhHHHHHHhCCCCCCEEEeCCCC----CHHHhC---CCEEEECC-
Confidence 46666777764 47777888 554 358875 57999996 4554433322 222221 24778876
Q ss_pred CCCCccCHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHh
Q 017557 306 DEDGLFTRDGVCKAVKAVMDDDSEVGKDARQNHAELREFLISPGLENSYVDGFVQELHS 364 (369)
Q Consensus 306 ~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~v~~l~~ 364 (369)
.+.+.++++|.++|+. . .+.-+++.+++.+.+.+ -....-.+.|++.|..
T Consensus 423 -----~D~~~lA~AI~~aL~m--~-~~er~~r~~~~~~~V~~-~d~~~W~~~fl~~L~~ 472 (496)
T 3t5t_A 423 -----FDLVEQAEAISAALAA--G-PRQRAEAAARRRDAARP-WTLEAWVQAQLDGLAA 472 (496)
T ss_dssp -----TBHHHHHHHHHHHHHC--C-HHHHHHHHHHHHHHHTT-CBHHHHHHHHHHHHHH
T ss_pred -----CCHHHHHHHHHHHHcC--C-HHHHHHHHHHHHHHHHH-CCHHHHHHHHHHHHhh
Confidence 4789999999999972 1 34566667777777763 3344556777776654
No 68
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=69.37 E-value=43 Score=26.99 Aligned_cols=140 Identities=10% Similarity=0.113 Sum_probs=76.1
Q ss_pred ceEEEeeCCCccCCHHHHHHHHHHHHhcCCcEEEEECCCCCCCccccCCchhHHHHhcCCCeeEecccChHHhhcCCCcc
Q 017557 176 SLIFCALGSECVLKKDQFQELILGFELTGLPFFAALKPPTGHDTIESALPEGFEERVKGRGFVHGGWVQQQLILKHPSVG 255 (369)
Q Consensus 176 ~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~~~ 255 (369)
+.|-|-+||.. +....++....|+..+.++-+.+-+ .+..|+.+.+..+ =...-.++
T Consensus 4 ~~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~S-------aHR~p~~~~~~~~--------------~a~~~g~~ 60 (163)
T 3ors_A 4 MKVAVIMGSSS--DWKIMQESCNMLDYFEIPYEKQVVS-------AHRTPKMMVQFAS--------------EARERGIN 60 (163)
T ss_dssp CCEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECC-------TTTSHHHHHHHHH--------------HTTTTTCC
T ss_pred CeEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEC-------CcCCHHHHHHHHH--------------HHHhCCCc
Confidence 46777788876 5667778888888888886665543 3556665443221 01111233
Q ss_pred ceeecCCCchHHHHH---HhCCcccccccccchh--HH-HHHHhhh-cce--EEEEeecCCCCccCHHHHHHHHHHHhcc
Q 017557 256 CFVTHCGSGSLSEAM---VNECQLVLLPNVGDQI--IN-SRLMGED-LKV--GVEVERGDEDGLFTRDGVCKAVKAVMDD 326 (369)
Q Consensus 256 ~~ItHgG~~s~~Eal---~~GvP~i~~P~~~DQ~--~n-a~~v~~~-~g~--G~~l~~~~~~~~~~~~~l~~ai~~ll~~ 326 (369)
+||.=.|...-.-.+ ..-+|+|++|...... .. -.-+.+. =|+ +..- .++ .+-.++..+...|-.+ .
T Consensus 61 ViIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~dsLlS~vqmp~GvPVatV~-I~~-a~~~nAa~lAa~Il~~-~- 136 (163)
T 3ors_A 61 IIIAGAGGAAHLPGMVASLTTLPVIGVPIETKSLKGIDSLLSIVQMPGGIPVATTA-IGA-AGAKNAGILAARMLSI-Q- 136 (163)
T ss_dssp EEEEEEESSCCHHHHHHHHCSSCEEEEEECCTTTTTHHHHHHHHTCCTTSCCEECC-STH-HHHHHHHHHHHHHHHT-T-
T ss_pred EEEEECCchhhhHHHHHhccCCCEEEeeCCCCCCCCHHHHHHHhhCCCCCceEEEE-cCC-cccHHHHHHHHHHHhC-C-
Confidence 488887765433333 3568999999854311 11 1112221 043 2221 110 0114555555555333 3
Q ss_pred CCcchHHHHHHHHHHHHHHh
Q 017557 327 DSEVGKDARQNHAELREFLI 346 (369)
Q Consensus 327 ~~~~~~~~~~~a~~l~~~~~ 346 (369)
++.++++.+..++.++
T Consensus 137 ----d~~l~~kl~~~r~~~~ 152 (163)
T 3ors_A 137 ----NPSLVEKLNQYESSLI 152 (163)
T ss_dssp ----CTHHHHHHHHHHHHHH
T ss_pred ----CHHHHHHHHHHHHHHH
Confidence 6788888888887776
No 69
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=68.22 E-value=49 Score=27.19 Aligned_cols=141 Identities=10% Similarity=0.108 Sum_probs=77.9
Q ss_pred CceEEEeeCCCccCCHHHHHHHHHHHHhcCCcEEEEECCCCCCCccccCCchhHHHHhcCCCeeEecccChHHhhcCCCc
Q 017557 175 KSLIFCALGSECVLKKDQFQELILGFELTGLPFFAALKPPTGHDTIESALPEGFEERVKGRGFVHGGWVQQQLILKHPSV 254 (369)
Q Consensus 175 ~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~~ 254 (369)
-|.|-|-+||.. +....++....|+..+.++-+.+-+ ....|+.+.+..+ + ...-.+
T Consensus 13 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~S-------aHR~p~~l~~~~~-----------~---a~~~g~ 69 (183)
T 1o4v_A 13 VPRVGIIMGSDS--DLPVMKQAAEILEEFGIDYEITIVS-------AHRTPDRMFEYAK-----------N---AEERGI 69 (183)
T ss_dssp -CEEEEEESCGG--GHHHHHHHHHHHHHTTCEEEEEECC-------TTTCHHHHHHHHH-----------H---TTTTTC
T ss_pred CCeEEEEeccHH--HHHHHHHHHHHHHHcCCCeEEEEEc-------ccCCHHHHHHHHH-----------H---HHhCCC
Confidence 357888888887 5677778888888888886665543 3556665443211 0 011122
Q ss_pred cceeecCCCchHHHH---HHhCCcccccccccc--hhHHHH--HHhh-hcceEEEEeecCCCCccCHHHHHHHHHHHhcc
Q 017557 255 GCFVTHCGSGSLSEA---MVNECQLVLLPNVGD--QIINSR--LMGE-DLKVGVEVERGDEDGLFTRDGVCKAVKAVMDD 326 (369)
Q Consensus 255 ~~~ItHgG~~s~~Ea---l~~GvP~i~~P~~~D--Q~~na~--~v~~-~~g~G~~l~~~~~~~~~~~~~l~~ai~~ll~~ 326 (369)
++||.=.|...-.-. -..-+|+|++|.... ...++- .++- . |+.+..- .-++..++..+...|-. +.
T Consensus 70 ~ViIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~dsLlSivqmP~-GvpVatV--~Id~~~nAa~lAaqIla-~~- 144 (183)
T 1o4v_A 70 EVIIAGAGGAAHLPGMVASITHLPVIGVPVKTSTLNGLDSLFSIVQMPG-GVPVATV--AINNAKNAGILAASILG-IK- 144 (183)
T ss_dssp CEEEEEEESSCCHHHHHHHHCSSCEEEEEECCTTTTTHHHHHHHHTCCT-TCCCEEC--CTTCHHHHHHHHHHHHH-TT-
T ss_pred cEEEEecCcccccHHHHHhccCCCEEEeeCCCCCCCcHHHHHHHhcCCC-CCeeEEE--ecCCchHHHHHHHHHHh-cC-
Confidence 338887776433332 236689999998542 222221 1221 1 3221111 10122566666666643 33
Q ss_pred CCcchHHHHHHHHHHHHHHhc
Q 017557 327 DSEVGKDARQNHAELREFLIS 347 (369)
Q Consensus 327 ~~~~~~~~~~~a~~l~~~~~~ 347 (369)
++.++++.+..++.+.+
T Consensus 145 ----d~~l~~kL~~~r~~~~~ 161 (183)
T 1o4v_A 145 ----YPEIARKVKEYKERMKR 161 (183)
T ss_dssp ----CHHHHHHHHHHHHHHHH
T ss_pred ----CHHHHHHHHHHHHHHHH
Confidence 67888888888777664
No 70
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=67.35 E-value=49 Score=26.84 Aligned_cols=142 Identities=15% Similarity=0.183 Sum_probs=78.0
Q ss_pred CceEEEeeCCCccCCHHHHHHHHHHHHhcCCcEEEEECCCCCCCccccCCchhHHHHhcCCCeeEecccChHHhhcCCCc
Q 017557 175 KSLIFCALGSECVLKKDQFQELILGFELTGLPFFAALKPPTGHDTIESALPEGFEERVKGRGFVHGGWVQQQLILKHPSV 254 (369)
Q Consensus 175 ~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~~ 254 (369)
++.|-|-+||.. +....++..+.|+..+.++-+.+-+ .+..|+.+.+..+ .. ..-.+
T Consensus 6 ~~~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~S-------aHR~p~~~~~~~~-----------~a---~~~g~ 62 (169)
T 3trh_A 6 KIFVAILMGSDS--DLSTMETAFTELKSLGIPFEAHILS-------AHRTPKETVEFVE-----------NA---DNRGC 62 (169)
T ss_dssp CCEEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECC-------TTTSHHHHHHHHH-----------HH---HHTTE
T ss_pred CCcEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEc-------ccCCHHHHHHHHH-----------HH---HhCCC
Confidence 346777788876 5667778888888888887665543 3556665443211 00 11122
Q ss_pred cceeecCCCchHHHHHH---hCCcccccccccc---hhHHHHHHhh--hcceEEEE-eecCCCCccCHHHHHHHHHHHhc
Q 017557 255 GCFVTHCGSGSLSEAMV---NECQLVLLPNVGD---QIINSRLMGE--DLKVGVEV-ERGDEDGLFTRDGVCKAVKAVMD 325 (369)
Q Consensus 255 ~~~ItHgG~~s~~Eal~---~GvP~i~~P~~~D---Q~~na~~v~~--~~g~G~~l-~~~~~~~~~~~~~l~~ai~~ll~ 325 (369)
++||.=.|...-.-.+. .-+|+|++|...- -..----..+ . |+.+.. ..++ .+-.++..+...|-.+ .
T Consensus 63 ~ViIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~dsLlS~vqmp~-GvPVatV~I~~-a~~~nAa~lAa~Il~~-~ 139 (169)
T 3trh_A 63 AVFIAAAGLAAHLAGTIAAHTLKPVIGVPMAGGSLGGLDALLSTVQMPG-GVPVACTAIGK-AGAKNAAILAAQIIAL-Q 139 (169)
T ss_dssp EEEEEEECSSCCHHHHHHHTCSSCEEEEECCCSTTTTHHHHHHHHCCCT-TSCCEECCSTH-HHHHHHHHHHHHHHHT-T
T ss_pred cEEEEECChhhhhHHHHHhcCCCCEEEeecCCCCCCCHHHHHHhhcCCC-CCceEEEecCC-ccchHHHHHHHHHHcC-C
Confidence 33888888654444433 4589999998532 1111122222 3 442111 1110 0113445555554332 3
Q ss_pred cCCcchHHHHHHHHHHHHHHhc
Q 017557 326 DDSEVGKDARQNHAELREFLIS 347 (369)
Q Consensus 326 ~~~~~~~~~~~~a~~l~~~~~~ 347 (369)
|+.++++.+..++.+++
T Consensus 140 -----d~~l~~kl~~~r~~~~~ 156 (169)
T 3trh_A 140 -----DKSIAQKLVQQRTAKRE 156 (169)
T ss_dssp -----CHHHHHHHHHHHHHHHH
T ss_pred -----CHHHHHHHHHHHHHHHH
Confidence 68888888888887763
No 71
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=67.33 E-value=50 Score=26.92 Aligned_cols=141 Identities=11% Similarity=0.096 Sum_probs=76.9
Q ss_pred ceEEEeeCCCccCCHHHHHHHHHHHHhcCCcEEEEECCCCCCCccccCCchhHHHHhcCCCeeEecccChHHhhcCCCcc
Q 017557 176 SLIFCALGSECVLKKDQFQELILGFELTGLPFFAALKPPTGHDTIESALPEGFEERVKGRGFVHGGWVQQQLILKHPSVG 255 (369)
Q Consensus 176 ~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~~~ 255 (369)
+.|-|-+||.. +....++..+.|+..+.++-+.+-+ .+..|+.+.+..+ =...-.++
T Consensus 13 ~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~ev~V~S-------aHR~p~~~~~~~~--------------~a~~~g~~ 69 (174)
T 3kuu_A 13 VKIAIVMGSKS--DWATMQFAADVLTTLNVPFHVEVVS-------AHRTPDRLFSFAE--------------QAEANGLH 69 (174)
T ss_dssp CCEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECC-------TTTCHHHHHHHHH--------------HTTTTTCS
T ss_pred CcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEc-------ccCCHHHHHHHHH--------------HHHhCCCc
Confidence 45777788876 5667778888888888887665543 3556665443221 01111233
Q ss_pred ceeecCCCchHHHHHH---hCCcccccccccc---hhHHHHHHhh--hcceEEEE-eecCCCCccCHHHHHHHHHHHhcc
Q 017557 256 CFVTHCGSGSLSEAMV---NECQLVLLPNVGD---QIINSRLMGE--DLKVGVEV-ERGDEDGLFTRDGVCKAVKAVMDD 326 (369)
Q Consensus 256 ~~ItHgG~~s~~Eal~---~GvP~i~~P~~~D---Q~~na~~v~~--~~g~G~~l-~~~~~~~~~~~~~l~~ai~~ll~~ 326 (369)
+||.=.|...-.-.+. .-+|+|++|.... -..----..+ . |+.+.. ..++ .+-.++..+...|-.+ .
T Consensus 70 ViIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~dsLlS~vqmP~-GvPVatV~I~~-a~~~nAa~lAa~ILa~-~- 145 (174)
T 3kuu_A 70 VIIAGNGGAAHLPGMLAAKTLVPVLGVPVQSAALSGVDSLYSIVQMPR-GIPVGTLAIGK-AGAANAALLAAQILAL-H- 145 (174)
T ss_dssp EEEEEEESSCCHHHHHHHTCSSCEEEEEECCTTTTTHHHHHHHHTCCT-TSCCEECCSSH-HHHHHHHHHHHHHHHT-T-
T ss_pred EEEEECChhhhhHHHHHhccCCCEEEeeCCCCCCCCHHHHHHhhhCCC-CCeeEEEEeCC-ccchHHHHHHHHHHcC-C-
Confidence 4888887654444333 4589999998532 1111112222 2 432111 1110 0113455555555332 3
Q ss_pred CCcchHHHHHHHHHHHHHHhc
Q 017557 327 DSEVGKDARQNHAELREFLIS 347 (369)
Q Consensus 327 ~~~~~~~~~~~a~~l~~~~~~ 347 (369)
|+.++++.++.++.+++
T Consensus 146 ----d~~l~~kl~~~r~~~~~ 162 (174)
T 3kuu_A 146 ----DTELAGRLAHWRQSQTD 162 (174)
T ss_dssp ----CHHHHHHHHHHHHHHHH
T ss_pred ----CHHHHHHHHHHHHHHHH
Confidence 68888888888877763
No 72
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=67.07 E-value=52 Score=27.03 Aligned_cols=141 Identities=9% Similarity=0.104 Sum_probs=79.1
Q ss_pred ceEEEeeCCCccCCHHHHHHHHHHHHhcCCcEEEEECCCCCCCccccCCchhHHHHhcCCCeeEecccChHHhhcCCCcc
Q 017557 176 SLIFCALGSECVLKKDQFQELILGFELTGLPFFAALKPPTGHDTIESALPEGFEERVKGRGFVHGGWVQQQLILKHPSVG 255 (369)
Q Consensus 176 ~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~~~ 255 (369)
+.|-|-+||.. +....++....|+..+.++-+.+-+ .+..|+.+.+..+ + ...-.++
T Consensus 22 ~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~S-------aHR~p~~l~~~~~-----------~---a~~~g~~ 78 (182)
T 1u11_A 22 PVVGIIMGSQS--DWETMRHADALLTELEIPHETLIVS-------AHRTPDRLADYAR-----------T---AAERGLN 78 (182)
T ss_dssp CSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECC-------TTTCHHHHHHHHH-----------H---TTTTTCC
T ss_pred CEEEEEECcHH--HHHHHHHHHHHHHHcCCCeEEEEEc-------ccCCHHHHHHHHH-----------H---HHhCCCc
Confidence 46777788876 5677778888888888886665543 3556665433211 0 0111123
Q ss_pred ceeecCCCchHHHH---HHhCCcccccccccc--hhHHH-HHHhh--hcceEEE-EeecCCCCccCHHHHHHHHHHHhcc
Q 017557 256 CFVTHCGSGSLSEA---MVNECQLVLLPNVGD--QIINS-RLMGE--DLKVGVE-VERGDEDGLFTRDGVCKAVKAVMDD 326 (369)
Q Consensus 256 ~~ItHgG~~s~~Ea---l~~GvP~i~~P~~~D--Q~~na-~~v~~--~~g~G~~-l~~~~~~~~~~~~~l~~ai~~ll~~ 326 (369)
+||.=.|...-.-. -..-+|+|++|.... +...+ .-+.+ . |+.+. +..++ .+-.++..+...|- -+.
T Consensus 79 ViIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~dsLlSivqmP~-GvpVatV~I~~-a~~~nAallAaqIl-a~~- 154 (182)
T 1u11_A 79 VIIAGAGGAAHLPGMCAAWTRLPVLGVPVESRALKGMDSLLSIVQMPG-GVPVGTLAIGA-SGAKNAALLAASIL-ALY- 154 (182)
T ss_dssp EEEEEEESSCCHHHHHHHHCSSCEEEEEECCTTTTTHHHHHHHHCCCT-TSCCEECCSSH-HHHHHHHHHHHHHH-GGG-
T ss_pred EEEEecCchhhhHHHHHhccCCCEEEeeCCCCCCCcHHHHHHHhcCCC-CCceEEEecCC-ccchHHHHHHHHHH-ccC-
Confidence 38887776433332 335789999998542 22222 22333 4 55522 11110 01245555665553 234
Q ss_pred CCcchHHHHHHHHHHHHHHhc
Q 017557 327 DSEVGKDARQNHAELREFLIS 347 (369)
Q Consensus 327 ~~~~~~~~~~~a~~l~~~~~~ 347 (369)
++.++++.+..++.+++
T Consensus 155 ----d~~l~~kL~~~r~~~~~ 171 (182)
T 1u11_A 155 ----NPALAARLETWRALQTA 171 (182)
T ss_dssp ----CHHHHHHHHHHHHHHHH
T ss_pred ----CHHHHHHHHHHHHHHHH
Confidence 68899999888887764
No 73
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=61.51 E-value=63 Score=26.10 Aligned_cols=143 Identities=10% Similarity=0.051 Sum_probs=77.5
Q ss_pred ceEEEeeCCCccCCHHHHHHHHHHHHhcCCcEEEEECCCCCCCccccCCchhHHHHhcCCCeeEecccChHHhhcCCCcc
Q 017557 176 SLIFCALGSECVLKKDQFQELILGFELTGLPFFAALKPPTGHDTIESALPEGFEERVKGRGFVHGGWVQQQLILKHPSVG 255 (369)
Q Consensus 176 ~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~~~ 255 (369)
+.|-|-+||.. +....++..+.|+..+.++-+.+-+ .+..|+.+.+..+ -+....++
T Consensus 6 p~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~S-------aHRtp~~l~~~~~--------------~~~~~g~~ 62 (166)
T 3oow_A 6 VQVGVIMGSKS--DWSTMKECCDILDNLGIGYECEVVS-------AHRTPDKMFDYAE--------------TAKERGLK 62 (166)
T ss_dssp EEEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECC-------TTTCHHHHHHHHH--------------HTTTTTCC
T ss_pred CeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEc-------CcCCHHHHHHHHH--------------HHHhCCCc
Confidence 46777788876 5667778888888888876665543 3556665443221 11111234
Q ss_pred ceeecCCCchHHHHHH---hCCcccccccccch--hHH-HHHHhhh-cceEEEEeecCCCCccCHHHHHHHHHHHhccCC
Q 017557 256 CFVTHCGSGSLSEAMV---NECQLVLLPNVGDQ--IIN-SRLMGED-LKVGVEVERGDEDGLFTRDGVCKAVKAVMDDDS 328 (369)
Q Consensus 256 ~~ItHgG~~s~~Eal~---~GvP~i~~P~~~DQ--~~n-a~~v~~~-~g~G~~l~~~~~~~~~~~~~l~~ai~~ll~~~~ 328 (369)
+||.=.|...-.-.+. .-+|+|++|...-. ... -.-+.+. =|+++..-.-+..+-.++..+...|-.+ .
T Consensus 63 ViIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~dsLlS~vqmp~gvpVatV~I~~ag~~nAa~lAa~Il~~-~--- 138 (166)
T 3oow_A 63 VIIAGAGGAAHLPGMVAAKTTLPVLGVPVKSSTLNGQDSLLSIVQMPAGIPVATFAIGMAGAKNAALFAASILQH-T--- 138 (166)
T ss_dssp EEEEEECSSCCHHHHHHHTCSSCEEEEECCCTTTTTHHHHHHHHTCCTTSCCEECCSTHHHHHHHHHHHHHHHGG-G---
T ss_pred EEEEECCcchhhHHHHHhccCCCEEEeecCcCCCCCHHHHHHHhcCCCCCceEEEecCCccchHHHHHHHHHHcC-C---
Confidence 4998888754444433 45899999984321 111 1112222 0333322110000113444555444322 3
Q ss_pred cchHHHHHHHHHHHHHHhc
Q 017557 329 EVGKDARQNHAELREFLIS 347 (369)
Q Consensus 329 ~~~~~~~~~a~~l~~~~~~ 347 (369)
|+.++++.+..++.+++
T Consensus 139 --d~~l~~kl~~~r~~~~~ 155 (166)
T 3oow_A 139 --DINIAKALAEFRAEQTR 155 (166)
T ss_dssp --CHHHHHHHHHHHHHHHH
T ss_pred --CHHHHHHHHHHHHHHHH
Confidence 68888888888877763
No 74
>3irs_A Uncharacterized protein BB4693; structural genomics, PSI-2, protein structure initiative, TI protein; HET: GOL; 1.76A {Bordetella bronchiseptica} PDB: 3k4w_A
Probab=61.00 E-value=50 Score=29.00 Aligned_cols=190 Identities=10% Similarity=0.009 Sum_probs=96.4
Q ss_pred hhhhhhhhcCcceeEeCCCCCCCCCCCchhHHHhhhccCCCCceEEEeeCC---CccCCHHHHHHHHHHHHhcCCcEEEE
Q 017557 134 YCDCVESQFEKRVILAGPVLPEPPASVLEEEFEMLFSSFKAKSLIFCALGS---ECVLKKDQFQELILGFELTGLPFFAA 210 (369)
Q Consensus 134 ~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS---~~~~~~~~~~~~~~~l~~~~~~~i~~ 210 (369)
++....+.+|.+++.++.+.+... ....+++.. +...+-+++-+. .+. ........+..+++.+++.+.++++-
T Consensus 81 ~~~~~~~~~p~r~~~~~~v~p~~~-~~a~~eL~~-~~~~g~~Gi~~~-~~~~~~~~~~~d~~~~~~~~~a~e~glpv~iH 157 (291)
T 3irs_A 81 DVAAVAKAYPDKFHPVGSIEAATR-KEAMAQMQE-ILDLGIRIVNLE-PGVWATPMHVDDRRLYPLYAFCEDNGIPVIMM 157 (291)
T ss_dssp HHHHHHHHSTTTEEEEEECCCSSH-HHHHHHHHH-HHHTTCCCEEEC-GGGSSSCCCTTCGGGHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHCCCcEEEEEecCccCH-HHHHHHHHH-HHhCCCeEEEEe-CCCCCCCCCCCCHHHHHHHHHHHHcCCeEEEe
Confidence 333334456667877777765421 112345666 554333333332 222 12234567888999999999998877
Q ss_pred ECCCCCCCccccCCchhHHHHhcCCCeeEecccChHH-hhcCCCccceeecCCCchHHHHHHh--CCcccccccc---cc
Q 017557 211 LKPPTGHDTIESALPEGFEERVKGRGFVHGGWVQQQL-ILKHPSVGCFVTHCGSGSLSEAMVN--ECQLVLLPNV---GD 284 (369)
Q Consensus 211 ~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~-lL~~~~~~~~ItHgG~~s~~Eal~~--GvP~i~~P~~---~D 284 (369)
.+...... .....|. .... +-.+|++++++.|||+....+.+.. ..|-+-+-.. ..
T Consensus 158 ~~~~~~~~-~~~~~p~-----------------~~~~v~~~~P~l~ivl~H~G~~~~~~~~~l~~~~~nvy~~~Sg~~~~ 219 (291)
T 3irs_A 158 TGGNAGPD-ITYTNPE-----------------HIDRVLGDFPDLTVVSSHGNWPWVQEIIHVAFRRPNLYLSPDMYLYN 219 (291)
T ss_dssp CSSSCSSS-GGGGCHH-----------------HHHHHHHHCTTCCEEEEGGGTTCHHHHHHHHHHCTTEEEECGGGGSS
T ss_pred CCCCCCCC-CccCCHH-----------------HHHHHHHHCCCCEEEeecCCcccHHHHHHHHhHCCCeEecHHHHhcc
Confidence 65431000 0000010 0122 3357889999999998877766552 2222222211 01
Q ss_pred hh---HHHHHHhhhcceEEEEeecCCCCccCHHHHHHHHHHH-hccCCcchHHHHHHHHHHHHHHhc
Q 017557 285 QI---INSRLMGEDLKVGVEVERGDEDGLFTRDGVCKAVKAV-MDDDSEVGKDARQNHAELREFLIS 347 (369)
Q Consensus 285 Q~---~na~~v~~~~g~G~~l~~~~~~~~~~~~~l~~ai~~l-l~~~~~~~~~~~~~a~~l~~~~~~ 347 (369)
.+ .-.+.+... |.-..+-.++ -+..+.....+.+.++ ++ .++...-+.+||+++=..-+.
T Consensus 220 ~~~~~~~~~~~~~~-g~drllfgSD-~P~~~~~~~~~~~~~l~l~-~e~~~~i~~~NA~rl~~~~~~ 283 (291)
T 3irs_A 220 LPGHADFIQAANSF-LADRMLFGTA-YPMCPLKEYTEWFLTLPIK-PDAMEKILHGNAERLLAQAGR 283 (291)
T ss_dssp STTHHHHHHHHTTG-GGGTBCCCCC-BTSSCHHHHHHHHHTSSCC-HHHHHHHHTHHHHHHHHHSCC
T ss_pred CCCHHHHHHHHHHh-CcceEEEecC-CCCCCHHHHHHHHHHCCCC-HHHHHHHHHHHHHHHhCcccc
Confidence 11 112233444 6555554433 4445566666666654 22 122245577888887665443
No 75
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=59.37 E-value=53 Score=31.18 Aligned_cols=149 Identities=9% Similarity=0.038 Sum_probs=76.7
Q ss_pred CceEEEeeCCCccCCHHHHHHHHHHHHhcCCcEEEEECCCCCCCccccCCchhHHHHhcCCCeeEecccChHHhhcCCCc
Q 017557 175 KSLIFCALGSECVLKKDQFQELILGFELTGLPFFAALKPPTGHDTIESALPEGFEERVKGRGFVHGGWVQQQLILKHPSV 254 (369)
Q Consensus 175 ~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~~ 254 (369)
+.++.|..|..+ ...++.|...+..+.++... +.+.+.+.....++.+..-.-+..-|..+++
T Consensus 13 ~~vlVvGgG~va-------~~k~~~L~~~ga~V~vi~~~----------~~~~~~~l~~~~~i~~~~~~~~~~~l~~~~l 75 (457)
T 1pjq_A 13 RDCLIVGGGDVA-------ERKARLLLEAGARLTVNALT----------FIPQFTVWANEGMLTLVEGPFDETLLDSCWL 75 (457)
T ss_dssp CEEEEECCSHHH-------HHHHHHHHHTTBEEEEEESS----------CCHHHHHHHTTTSCEEEESSCCGGGGTTCSE
T ss_pred CEEEEECCCHHH-------HHHHHHHHhCcCEEEEEcCC----------CCHHHHHHHhcCCEEEEECCCCccccCCccE
Confidence 557777777665 55666677788887777532 1123333322234433221112334556666
Q ss_pred cceeecCCCchHH-----HHHHhCCcc--cccccccchhHHHHHHhhhcceEEEEeecCCCCccCHHHHHHHHHHHhccC
Q 017557 255 GCFVTHCGSGSLS-----EAMVNECQL--VLLPNVGDQIINSRLMGEDLKVGVEVERGDEDGLFTRDGVCKAVKAVMDDD 327 (369)
Q Consensus 255 ~~~ItHgG~~s~~-----Eal~~GvP~--i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~~l~~ai~~ll~~~ 327 (369)
+|.--|--.+. +|-..|+|+ +.-|-..+...-+ .+.+. ++=+.+..+. ....-+..|++.|++.+.
T Consensus 76 --Vi~at~~~~~n~~i~~~a~~~~i~vn~~d~~e~~~~~~pa-~~~~~-~l~iaIsT~G-ksp~la~~ir~~ie~~l~-- 148 (457)
T 1pjq_A 76 --AIAATDDDTVNQRVSDAAESRRIFCNVVDAPKAASFIMPS-IIDRS-PLMVAVSSGG-TSPVLARLLREKLESLLP-- 148 (457)
T ss_dssp --EEECCSCHHHHHHHHHHHHHTTCEEEETTCTTSSSEECCE-EEEET-TEEEEEECTT-SCHHHHHHHHHHHHHHSC--
T ss_pred --EEEcCCCHHHHHHHHHHHHHcCCEEEECCCcccCceEeee-EEEeC-CeEEEEECCC-CChHHHHHHHHHHHHhcc--
Confidence 77777765433 345568886 4444333222100 01122 3333344221 112225778888888884
Q ss_pred CcchHHHHHHHHHHHHHHhcC
Q 017557 328 SEVGKDARQNHAELREFLISP 348 (369)
Q Consensus 328 ~~~~~~~~~~a~~l~~~~~~~ 348 (369)
. .-..+-+.+.++++.+++.
T Consensus 149 ~-~~~~~~~~~~~~R~~~~~~ 168 (457)
T 1pjq_A 149 Q-HLGQVARYAGQLRARVKKQ 168 (457)
T ss_dssp T-THHHHHHHHHHHHHHHHHH
T ss_pred h-hHHHHHHHHHHHHHHHHhh
Confidence 1 1356777777777777654
No 76
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=57.74 E-value=21 Score=26.29 Aligned_cols=41 Identities=12% Similarity=0.162 Sum_probs=28.4
Q ss_pred HHHHHHHhhcCCCEEEECC-CC--ChHHHHHHh-------CCCeEEEeCch
Q 017557 9 PAIEAIVRDIKPNIVFFDF-TY--WLPSLARKL-------GIKSIAFVTVS 49 (369)
Q Consensus 9 ~~l~~~l~~~~pD~vI~D~-~~--~~~~~A~~l-------giP~v~~~~~~ 49 (369)
....+.+++.+||+||.|. .+ -+..+++++ ++|.+.++...
T Consensus 36 ~~al~~l~~~~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~~ 86 (122)
T 3gl9_A 36 QIALEKLSEFTPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAKG 86 (122)
T ss_dssp HHHHHHHTTBCCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESCC
T ss_pred HHHHHHHHhcCCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecCC
Confidence 3445556677899999998 54 456666654 58888877643
No 77
>2wm1_A 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; neurological disorders, metal-dependent amidohydrolase, kynurenine pathway; HET: 13P; 2.01A {Homo sapiens}
Probab=54.19 E-value=12 Score=33.81 Aligned_cols=70 Identities=13% Similarity=0.188 Sum_probs=40.7
Q ss_pred hhhcCcceeEeCCCCCCCCCCCchhHHHhhhccCCCCceEEEeeCCCc---cCCHHHHHHHHHHHHhcCCcEEEEEC
Q 017557 139 ESQFEKRVILAGPVLPEPPASVLEEEFEMLFSSFKAKSLIFCALGSEC---VLKKDQFQELILGFELTGLPFFAALK 212 (369)
Q Consensus 139 ~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~---~~~~~~~~~~~~~l~~~~~~~i~~~~ 212 (369)
....|.++..+|.+.+..++ ...+++...++..+-+++ -+|+.. ......+..+.+.+++.+.++++=.+
T Consensus 104 ~~~~p~r~~~~~~l~~~~~~-~a~~el~~~~~~~g~~Gv---~l~~~~~~~~l~d~~~~~~~~~~~e~~lpv~iH~~ 176 (336)
T 2wm1_A 104 VVSYPRRFVGLGTLPMQAPE-LAVKEMERCVKELGFPGV---QIGTHVNEWDLNAQELFPVYAAAERLKCSLFVHPW 176 (336)
T ss_dssp HHHSTTTEEEEECCCTTSHH-HHHHHHHHHHHTSCCSEE---EEESEETTEETTCGGGHHHHHHHHHHTCEEEEECC
T ss_pred HHhccCceeEEEeCCCcCHH-HHHHHHHHHHHccCCeEE---EECCcCCCCCCCCccHHHHHHHHHHcCCEEEECCC
Confidence 34466678777766543211 123567777654332333 334432 24456688888888888988776554
No 78
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=54.09 E-value=17 Score=36.84 Aligned_cols=110 Identities=8% Similarity=0.013 Sum_probs=70.8
Q ss_pred EecccChHHhhcCCCccceeecCCCchHHHHHHhCCcccccccccchhHHHHHHhhhcceEEEEeecC--C-CCccCHHH
Q 017557 239 HGGWVQQQLILKHPSVGCFVTHCGSGSLSEAMVNECQLVLLPNVGDQIINSRLMGEDLKVGVEVERGD--E-DGLFTRDG 315 (369)
Q Consensus 239 v~~~~pq~~lL~~~~~~~~ItHgG~~s~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~--~-~~~~~~~~ 315 (369)
+..+.+-.++|..+++ .||-- .+.+.|.+..++|+|....-.|++.+- .. | ...+..+ . .-.-+.++
T Consensus 603 ~~~~~di~~ll~~aD~--lITDy-SSv~fD~~~l~kPiif~~~D~~~Y~~~----~r-g--~y~d~~~~~pg~~~~~~~e 672 (729)
T 3l7i_A 603 VSNYNDVSELFLISDC--LITDY-SSVMFDYGILKRPQFFFAYDIDKYDKG----LR-G--FYMNYMEDLPGPIYTEPYG 672 (729)
T ss_dssp CTTCSCHHHHHHTCSE--EEESS-CTHHHHHGGGCCCEEEECTTTTTTTSS----CC-S--BSSCTTSSSSSCEESSHHH
T ss_pred CCCCcCHHHHHHHhCE--EEeec-hHHHHhHHhhCCCEEEecCCHHHHhhc----cC-C--cccChhHhCCCCeECCHHH
Confidence 4445677889999999 99985 346779999999999887655554331 12 2 2222111 0 11246788
Q ss_pred HHHHHHHHhccCCcchHHHHHHHHHHHHHHhc--CCCC-HHHHHHHHHHH
Q 017557 316 VCKAVKAVMDDDSEVGKDARQNHAELREFLIS--PGLE-NSYVDGFVQEL 362 (369)
Q Consensus 316 l~~ai~~ll~~~~~~~~~~~~~a~~l~~~~~~--~~~~-~~~~~~~v~~l 362 (369)
|.++|+..... +..|+++.+++.+.+-. .|.+ ++.++.+++..
T Consensus 673 L~~~i~~~~~~----~~~~~~~~~~~~~~~~~~~dg~as~ri~~~i~~~~ 718 (729)
T 3l7i_A 673 LAKELKNLDKV----QQQYQEKIDAFYDRFCSVDNGKASQYIGDLIHKDI 718 (729)
T ss_dssp HHHHHTTHHHH----HHHTHHHHHHHHHHHSTTCCSCHHHHHHHHHHHHH
T ss_pred HHHHHhhhhcc----chhHHHHHHHHHHHhCCccCChHHHHHHHHHHhcC
Confidence 99999887752 46788888888888752 2333 44445555443
No 79
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=53.30 E-value=12 Score=28.61 Aligned_cols=38 Identities=18% Similarity=0.028 Sum_probs=26.5
Q ss_pred HHHHHHHhhcCCCEEEECC-CC--ChHHHHHHh---CCCeEEEe
Q 017557 9 PAIEAIVRDIKPNIVFFDF-TY--WLPSLARKL---GIKSIAFV 46 (369)
Q Consensus 9 ~~l~~~l~~~~pD~vI~D~-~~--~~~~~A~~l---giP~v~~~ 46 (369)
.+-.+++++.+||+||.|. .+ -+..+++.+ ++|.+.++
T Consensus 43 ~eAl~~~~~~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~lT 86 (123)
T 2lpm_A 43 QEALDIARKGQFDIAIIDVNLDGEPSYPVADILAERNVPFIFAT 86 (123)
T ss_dssp HHHHHHHHHCCSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCBC
T ss_pred HHHHHHHHhCCCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEEe
Confidence 3445667778999999998 55 456666654 78876654
No 80
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=53.23 E-value=23 Score=27.36 Aligned_cols=40 Identities=8% Similarity=0.075 Sum_probs=29.0
Q ss_pred HHHHHHhhcCCCEEEECC-CC--ChHHHHHHh-------CCCeEEEeCch
Q 017557 10 AIEAIVRDIKPNIVFFDF-TY--WLPSLARKL-------GIKSIAFVTVS 49 (369)
Q Consensus 10 ~l~~~l~~~~pD~vI~D~-~~--~~~~~A~~l-------giP~v~~~~~~ 49 (369)
.-.+.+++.+||+||.|. .| -|..+++++ ++|.+.++...
T Consensus 48 ~al~~~~~~~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~~ 97 (134)
T 3to5_A 48 TALPMLKKGDFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEA 97 (134)
T ss_dssp HHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESSC
T ss_pred HHHHHHHhCCCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECCC
Confidence 344566677899999998 55 467777765 58888877544
No 81
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=50.14 E-value=27 Score=31.85 Aligned_cols=26 Identities=23% Similarity=0.207 Sum_probs=20.4
Q ss_pred CCCccceeecCCCchH---HHHHHhCCcccc
Q 017557 251 HPSVGCFVTHCGSGSL---SEAMVNECQLVL 278 (369)
Q Consensus 251 ~~~~~~~ItHgG~~s~---~Eal~~GvP~i~ 278 (369)
.|++ +|++||.-++ ..|-..|+|+++
T Consensus 92 ~PDv--Vi~~g~~~s~p~~laA~~~~iP~vi 120 (365)
T 3s2u_A 92 RPVC--VLGLGGYVTGPGGLAARLNGVPLVI 120 (365)
T ss_dssp CCSE--EEECSSSTHHHHHHHHHHTTCCEEE
T ss_pred CCCE--EEEcCCcchHHHHHHHHHcCCCEEE
Confidence 5777 9999998775 456678999885
No 82
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=49.18 E-value=52 Score=28.97 Aligned_cols=88 Identities=10% Similarity=-0.039 Sum_probs=47.7
Q ss_pred CCCccceeecCCCchHHHHHH-----h---CCcccccccccchhHHHH-----HHhhhcc-eEEEEeecCCCCccCHHHH
Q 017557 251 HPSVGCFVTHCGSGSLSEAMV-----N---ECQLVLLPNVGDQIINSR-----LMGEDLK-VGVEVERGDEDGLFTRDGV 316 (369)
Q Consensus 251 ~~~~~~~ItHgG~~s~~Eal~-----~---GvP~i~~P~~~DQ~~na~-----~v~~~~g-~G~~l~~~~~~~~~~~~~l 316 (369)
.+++ +|.--|-..+.+.++ . |+|+-. .|.+.++. .+.+- + +-+.+..+. ....-+..|
T Consensus 106 ~adl--Viaat~d~~~n~~I~~~Ar~~f~~~i~VNv----vd~pel~~f~~Pa~~~~g-~~l~IaIST~G-ksp~lA~~i 177 (274)
T 1kyq_A 106 AWYI--IMTCIPDHPESARIYHLCKERFGKQQLVNV----ADKPDLCDFYFGANLEIG-DRLQILISTNG-LSPRFGALV 177 (274)
T ss_dssp CEEE--EEECCSCHHHHHHHHHHHHHHHCTTSEEEE----TTCGGGBSEECCEEEEET-TTEEEEEEESS-SCHHHHHHH
T ss_pred CeEE--EEEcCCChHHHHHHHHHHHHhcCCCcEEEE----CCCcccCeeEeeeEEEeC-CCEEEEEECCC-CCcHHHHHH
Confidence 4555 777777655555544 2 555511 23333333 22333 3 344444322 222345678
Q ss_pred HHHHHHHh---ccCCcchHHHHHHHHHHHHHHhcC
Q 017557 317 CKAVKAVM---DDDSEVGKDARQNHAELREFLISP 348 (369)
Q Consensus 317 ~~ai~~ll---~~~~~~~~~~~~~a~~l~~~~~~~ 348 (369)
++.|+..+ . +..-..+-+.+.++++.+++.
T Consensus 178 r~~ie~~l~~~p--~~~~~~~~~~l~~~R~~ik~~ 210 (274)
T 1kyq_A 178 RDEIRNLFTQMG--DLALEDAVVKLGELRRGIRLL 210 (274)
T ss_dssp HHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCC--chhHHHHHHHHHHHHHHHHhh
Confidence 88888888 3 122456778888888888754
No 83
>4inf_A Metal-dependent hydrolase; amidohydrolase, metal binding site, enzyme functi initiative, EFI; 1.48A {Novosphingobium aromaticivorans} PDB: 4ing_A*
Probab=49.06 E-value=92 Score=28.60 Aligned_cols=72 Identities=15% Similarity=0.214 Sum_probs=40.6
Q ss_pred hcCcceeEeCCCCCCCCCCCchhHHHhhhccCCCCceEEEeeCCCccCCHHHHHHHHHHHHhcCCcEEEEECC
Q 017557 141 QFEKRVILAGPVLPEPPASVLEEEFEMLFSSFKAKSLIFCALGSECVLKKDQFQELILGFELTGLPFFAALKP 213 (369)
Q Consensus 141 ~~~~~~~~vGp~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~ 213 (369)
..|.+++.++-+.+..++ ...+++....+..+-+++.+-............+..+.+++++.+.++.+=.+.
T Consensus 142 ~~P~Rf~g~a~v~~~~~~-~a~~EL~r~~~~~G~~Gv~l~~~~~g~~l~d~~~~pi~~~~~e~g~pV~iH~g~ 213 (373)
T 4inf_A 142 KYPDRFIGMGTVAPQDPE-WSAREIHRGARELGFKGIQINSHTQGRYLDEEFFDPIFRALVEVDQPLYIHPAT 213 (373)
T ss_dssp HSTTTEEECBCCCTTSHH-HHHHHHHHHHHTSCCCCEEECSCBTTBCTTSGGGHHHHHHHHHHTCCEEECCCC
T ss_pred hCCCEEEEEEecCCCCHH-HHHHHHHHHHhhcCceEEEECCCCCCCCCCCcchHHHHHHHHHcCCeEEECCCC
Confidence 456678777766543210 013567777765343444332221112244567888999998889886665443
No 84
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=47.39 E-value=37 Score=25.42 Aligned_cols=41 Identities=7% Similarity=0.047 Sum_probs=27.5
Q ss_pred HHHHHHHhhcCCCEEEECC-CC--ChHHHHHHh-------CCCeEEEeCch
Q 017557 9 PAIEAIVRDIKPNIVFFDF-TY--WLPSLARKL-------GIKSIAFVTVS 49 (369)
Q Consensus 9 ~~l~~~l~~~~pD~vI~D~-~~--~~~~~A~~l-------giP~v~~~~~~ 49 (369)
....+.+++.+||+||.|. .+ -+..+++.+ ++|.+.++...
T Consensus 38 ~~al~~~~~~~~dlvl~D~~lp~~~g~~~~~~lr~~~~~~~~pii~~t~~~ 88 (136)
T 3t6k_A 38 EEALQQIYKNLPDALICDVLLPGIDGYTLCKRVRQHPLTKTLPILMLTAQG 88 (136)
T ss_dssp HHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHSGGGTTCCEEEEECTT
T ss_pred HHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHcCCCcCCccEEEEecCC
Confidence 3444556667899999998 54 355555543 58888877643
No 85
>2ywx_A Phosphoribosylaminoimidazole carboxylase catalyti; rossmann fold, structural genomics, NPPSFA; 2.31A {Methanocaldococcus jannaschii}
Probab=45.87 E-value=1.1e+02 Score=24.35 Aligned_cols=135 Identities=16% Similarity=0.136 Sum_probs=74.8
Q ss_pred EEEeeCCCccCCHHHHHHHHHHHHhcCCcEEEEECCCCCCCccccCCchhHHHHhcCCCeeEecccChHHhhcCCCccce
Q 017557 178 IFCALGSECVLKKDQFQELILGFELTGLPFFAALKPPTGHDTIESALPEGFEERVKGRGFVHGGWVQQQLILKHPSVGCF 257 (369)
Q Consensus 178 v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~~~~~ 257 (369)
|-|-+||.. +....++....|+..+.++-+.+-+ .+..|+.+.+.. ..+.-++|
T Consensus 2 V~Iimgs~S--D~~v~~~a~~~l~~~gi~~dv~V~s-------aHR~p~~~~~~~-----------------~~a~~~Vi 55 (157)
T 2ywx_A 2 ICIIMGSES--DLKIAEKAVNILKEFGVEFEVRVAS-------AHRTPELVEEIV-----------------KNSKADVF 55 (157)
T ss_dssp EEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECC-------TTTCHHHHHHHH-----------------HHCCCSEE
T ss_pred EEEEEccHH--HHHHHHHHHHHHHHcCCCeEEEEEc-------ccCCHHHHHHHH-----------------HhcCCCEE
Confidence 455667765 5567777888888888886555543 355666544322 11111338
Q ss_pred eecCCCchHHHHHH---hCCccccccccc-chhHHH-HHHhh--hcceEEEEeecCCCCccCHHHHHHHHHHHhccCCcc
Q 017557 258 VTHCGSGSLSEAMV---NECQLVLLPNVG-DQIINS-RLMGE--DLKVGVEVERGDEDGLFTRDGVCKAVKAVMDDDSEV 330 (369)
Q Consensus 258 ItHgG~~s~~Eal~---~GvP~i~~P~~~-DQ~~na-~~v~~--~~g~G~~l~~~~~~~~~~~~~l~~ai~~ll~~~~~~ 330 (369)
|.=.|...-.-.+. .-+|+|++|... -....+ .-+.+ . |+.+..-. -++..++..+...|- -+.
T Consensus 56 Ia~AG~aa~Lpgvva~~t~~PVIgVP~~~~l~G~daLlS~vqmP~-gvpVatV~--I~~~~nAa~lA~~Il-~~~----- 126 (157)
T 2ywx_A 56 IAIAGLAAHLPGVVASLTTKPVIAVPVDAKLDGLDALLSSVQMPP-GIPVATVG--IDRGENAAILALEIL-ALK----- 126 (157)
T ss_dssp EEEEESSCCHHHHHHTTCSSCEEEEEECSSGGGHHHHHHHHSCCT-TSCCEECC--TTCHHHHHHHHHHHH-TTT-----
T ss_pred EEEcCchhhhHHHHHhccCCCEEEecCCCccCcHHHHHHHhcCCC-CCeeEEEe--cCCcHHHHHHHHHHH-hcC-----
Confidence 88777654444433 458999999822 111221 11222 3 43321111 011255666665553 233
Q ss_pred hHHHHHHHHHHHHHHhc
Q 017557 331 GKDARQNHAELREFLIS 347 (369)
Q Consensus 331 ~~~~~~~a~~l~~~~~~ 347 (369)
++.++++.++.++.+++
T Consensus 127 d~~l~~kl~~~r~~~~~ 143 (157)
T 2ywx_A 127 DENIAKKLIEYREKMKK 143 (157)
T ss_dssp CHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHH
Confidence 68888888888887764
No 86
>2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens}
Probab=44.60 E-value=2e+02 Score=26.93 Aligned_cols=139 Identities=9% Similarity=-0.008 Sum_probs=75.8
Q ss_pred CCceEEEeeCCCccCCHHHHHHHHHHHHhcCCcEEEEECCCCCCCccccCCchhHHHHhcCCCeeEecccChHHhhcCC-
Q 017557 174 AKSLIFCALGSECVLKKDQFQELILGFELTGLPFFAALKPPTGHDTIESALPEGFEERVKGRGFVHGGWVQQQLILKHP- 252 (369)
Q Consensus 174 ~~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~- 252 (369)
..+.|-|-+||.. +....++....|+..|.++-+.+-+ .+..|+...+.. .+..- ...
T Consensus 264 ~~~~V~Ii~gs~S--D~~~~~~a~~~l~~~gi~~~v~V~s-------aHR~p~~~~~~~-----------~~~~~-~g~~ 322 (425)
T 2h31_A 264 SQCRVVVLMGSTS--DLGHCEKIKKACGNFGIPCELRVTS-------AHKGPDETLRIK-----------AEYEG-DGIP 322 (425)
T ss_dssp CCCEEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECC-------TTTCHHHHHHHH-----------HHHHT-TCCC
T ss_pred CCCeEEEEecCcc--cHHHHHHHHHHHHHcCCceEEeeee-------ccCCHHHHHHHH-----------HHHHH-CCCC
Confidence 3467888888886 5677778888888888886655543 355666443221 11110 112
Q ss_pred CccceeecCCCchHHHH---HHhCCccccccccc-chhHHHH-HHhh--hcceEEEEeecCCCCccCHHHHHHHHHHHhc
Q 017557 253 SVGCFVTHCGSGSLSEA---MVNECQLVLLPNVG-DQIINSR-LMGE--DLKVGVEVERGDEDGLFTRDGVCKAVKAVMD 325 (369)
Q Consensus 253 ~~~~~ItHgG~~s~~Ea---l~~GvP~i~~P~~~-DQ~~na~-~v~~--~~g~G~~l~~~~~~~~~~~~~l~~ai~~ll~ 325 (369)
.+ +|.=+|...-.-+ -..-+|+|++|... .+...+- -+.+ . |+.+..-.. ..++..++..|-. +.
T Consensus 323 ~v--iIa~AG~~a~Lpgvva~~t~~PVIgvP~~~~~~G~daLls~vqmp~-g~pvatv~~----~~nAa~~A~~Il~-~~ 394 (425)
T 2h31_A 323 TV--FVAVAGRSNGLGPVMSGNTAYPVISCPPLTPDWGVQDVWSSLRLPS-GLGCSTVLS----PEGSAQFAAQIFG-LS 394 (425)
T ss_dssp EE--EEEECCSSCCHHHHHHHHCSSCEEECCCCCTTTHHHHGGGTSSCCS-SCCCEECCC----HHHHHHHHHHHHH-TT
T ss_pred eE--EEEEcCcccchHhHHhccCCCCEEEeeCccccccHHHHHHHhcCCC-CCceEEecC----chHHHHHHHHHHc-cC
Confidence 24 8887776433332 23568999999842 2221111 1222 2 443222111 1455666655542 33
Q ss_pred cCCcchHHHHHHHHHHHHHHh
Q 017557 326 DDSEVGKDARQNHAELREFLI 346 (369)
Q Consensus 326 ~~~~~~~~~~~~a~~l~~~~~ 346 (369)
++.++++.+..+....
T Consensus 395 -----~~~l~~kl~~~~~~~~ 410 (425)
T 2h31_A 395 -----NHLVWSKLRASILNTW 410 (425)
T ss_dssp -----CHHHHHHHHHHHHHHH
T ss_pred -----CHHHHHHHHHHHHHHH
Confidence 6777777777666654
No 87
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=44.36 E-value=24 Score=30.94 Aligned_cols=40 Identities=20% Similarity=0.216 Sum_probs=31.8
Q ss_pred HHHHHHHhhcCCCEEEECC-CC------ChHHHHHHhCCCeEEEeCc
Q 017557 9 PAIEAIVRDIKPNIVFFDF-TY------WLPSLARKLGIKSIAFVTV 48 (369)
Q Consensus 9 ~~l~~~l~~~~pD~vI~D~-~~------~~~~~A~~lgiP~v~~~~~ 48 (369)
.-|.+++++.+||+|+.-. .. .+..+|.+||+|.++....
T Consensus 102 ~~La~~i~~~~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~~ 148 (264)
T 1o97_C 102 RILTEVIKKEAPDMVFAGVQSSDQAYASTGISVASYLNWPHAAVVAD 148 (264)
T ss_dssp HHHHHHHHHHCCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEEE
T ss_pred HHHHHHHHhcCCCEEEEcCCccCCchhhHHHHHHHHhCCCcccceEE
Confidence 4556667777899999887 42 6889999999999997653
No 88
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=44.10 E-value=33 Score=26.03 Aligned_cols=40 Identities=8% Similarity=0.015 Sum_probs=27.3
Q ss_pred HHHHHHHhhcCCCEEEECC-CC--ChHHHHHHh---------CCCeEEEeCc
Q 017557 9 PAIEAIVRDIKPNIVFFDF-TY--WLPSLARKL---------GIKSIAFVTV 48 (369)
Q Consensus 9 ~~l~~~l~~~~pD~vI~D~-~~--~~~~~A~~l---------giP~v~~~~~ 48 (369)
....+.+++.+||+||.|. .+ -+..+++.+ .+|.+.++..
T Consensus 48 ~~al~~~~~~~~dlvl~D~~mp~~~g~~~~~~lr~~~~~~~~~~pii~~s~~ 99 (143)
T 3m6m_D 48 EQVLDAMAEEDYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSAD 99 (143)
T ss_dssp HHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHHHHTTCCCCCEEEEESC
T ss_pred HHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhchhccCCCCeEEEEeCC
Confidence 3445566677899999998 54 356666654 2788887654
No 89
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=43.88 E-value=41 Score=24.96 Aligned_cols=41 Identities=17% Similarity=0.202 Sum_probs=27.9
Q ss_pred HHHHHHHhhcCCCEEEECC-CC---ChHHHHHHh----CCCeEEEeCch
Q 017557 9 PAIEAIVRDIKPNIVFFDF-TY---WLPSLARKL----GIKSIAFVTVS 49 (369)
Q Consensus 9 ~~l~~~l~~~~pD~vI~D~-~~---~~~~~A~~l----giP~v~~~~~~ 49 (369)
....+.+++.+||+||.|. .+ -+..+++.+ ++|.+.++...
T Consensus 44 ~~a~~~~~~~~~dlii~d~~~~~~~~g~~~~~~l~~~~~~~ii~ls~~~ 92 (140)
T 3cg0_A 44 EEAVRCAPDLRPDIALVDIMLCGALDGVETAARLAAGCNLPIIFITSSQ 92 (140)
T ss_dssp HHHHHHHHHHCCSEEEEESSCCSSSCHHHHHHHHHHHSCCCEEEEECCC
T ss_pred HHHHHHHHhCCCCEEEEecCCCCCCCHHHHHHHHHhCCCCCEEEEecCC
Confidence 4455566667899999998 54 345555443 79998887644
No 90
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=43.64 E-value=11 Score=32.95 Aligned_cols=37 Identities=35% Similarity=0.435 Sum_probs=26.4
Q ss_pred HHHHHhhcCCCEEEECC--------------CCChHHHHHHhCCCeEEEeC
Q 017557 11 IEAIVRDIKPNIVFFDF--------------TYWLPSLARKLGIKSIAFVT 47 (369)
Q Consensus 11 l~~~l~~~~pD~vI~D~--------------~~~~~~~A~~lgiP~v~~~~ 47 (369)
+..++.+.+||+||+-. +..|+.-|..+|||.++++.
T Consensus 77 l~~~l~~~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~GipaIA~S~ 127 (251)
T 2wqk_A 77 YRVILEEKKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSA 127 (251)
T ss_dssp HHTTTTTCCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred hhhhcCCCCCCEEEeCccCCCccccceecchHHHHHHHHHhcCCCeEEEEc
Confidence 34456667899999943 22456667788999999884
No 91
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=43.59 E-value=20 Score=30.65 Aligned_cols=28 Identities=7% Similarity=0.195 Sum_probs=23.0
Q ss_pred ccceeecCCCchHHHHHHhCCcccccccc
Q 017557 254 VGCFVTHCGSGSLSEAMVNECQLVLLPNV 282 (369)
Q Consensus 254 ~~~~ItHgG~~s~~Eal~~GvP~i~~P~~ 282 (369)
+.++|++||........ .++|+|-++..
T Consensus 64 ~dVIISRGgta~~Lr~~-~~iPVV~I~vs 91 (225)
T 2pju_A 64 CDAIIAAGSNGAYLKSR-LSVPVILIKPS 91 (225)
T ss_dssp CSEEEEEHHHHHHHHTT-CSSCEEEECCC
T ss_pred CeEEEeCChHHHHHHhh-CCCCEEEecCC
Confidence 33499999988888875 58999999985
No 92
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=41.40 E-value=48 Score=29.41 Aligned_cols=114 Identities=9% Similarity=0.063 Sum_probs=68.7
Q ss_pred HHHHHHHHhcCCcEEEEECCCCCCCccccCCchhHHHHhcCCCeeEecccChHHhhcCCCccceeecCCCchHHHHHHhC
Q 017557 194 QELILGFELTGLPFFAALKPPTGHDTIESALPEGFEERVKGRGFVHGGWVQQQLILKHPSVGCFVTHCGSGSLSEAMVNE 273 (369)
Q Consensus 194 ~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~~~~~ItHgG~~s~~Eal~~G 273 (369)
.++++.|+..+..+++..+.. .-+|+.|.+..+.+-+-+ ||++ .=...|++.+..|+..|
T Consensus 155 ~~~~~~l~~~~~Dlivlagym-------~il~~~~l~~~~~~~iNi-----------HpSl--LP~~rG~~p~~~Ai~~G 214 (287)
T 3nrb_A 155 SQIKNIVTQSQADLIVLARYM-------QILSDDLSAFLSGRCINI-----------HHSF--LPGFKGAKPYHQAHTRG 214 (287)
T ss_dssp HHHHHHHHHHTCSEEEESSCC-------SCCCHHHHHHHTTSEEEE-----------ESSC--TTTTCSSCHHHHHHHHT
T ss_pred HHHHHHHHHhCCCEEEhhhhh-------hhcCHHHHhhccCCeEEE-----------Cccc--ccCCCCchHHHHHHHcC
Confidence 457778887788888887653 567877776654332222 3443 33456999999999999
Q ss_pred Cccccccccc--chhHHHHHHhhhcceEEEEeecCCCCccCHHHHHHHHHHHhccCCcchHHHHHHHHHH
Q 017557 274 CQLVLLPNVG--DQIINSRLMGEDLKVGVEVERGDEDGLFTRDGVCKAVKAVMDDDSEVGKDARQNHAEL 341 (369)
Q Consensus 274 vP~i~~P~~~--DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~a~~l 341 (369)
+...++-.+. +..+-+.-+.+. -+.+... -|.++|.+.+.++-. .-|.+..+.+
T Consensus 215 ~k~tG~Tvh~v~~~lD~GpIi~Q~---~v~i~~~-----dt~~~L~~r~~~~e~------~~l~~av~~~ 270 (287)
T 3nrb_A 215 VKLIGATAHFVTADLDEGPIIAQD---VEHVSHR-----DSAEDLVRKGRDIER------RVLSRAVLLF 270 (287)
T ss_dssp CSEEEEEEEECCSSSSCCCEEEEE---EEECCTT-----CCHHHHHHHHHHHHH------HHHHHHHHHH
T ss_pred CCeEEEEEEEECCCCcCCCEEEEE---EEecCCC-----CCHHHHHHHHHHHHH------HHHHHHHHHH
Confidence 9988887652 222211111111 1222232 588888888876643 4555555544
No 93
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=41.37 E-value=37 Score=24.70 Aligned_cols=41 Identities=12% Similarity=0.294 Sum_probs=27.1
Q ss_pred HHHHHHHhhcCCCEEEECC-CCC--hHHHHHHh----CCCeEEEeCch
Q 017557 9 PAIEAIVRDIKPNIVFFDF-TYW--LPSLARKL----GIKSIAFVTVS 49 (369)
Q Consensus 9 ~~l~~~l~~~~pD~vI~D~-~~~--~~~~A~~l----giP~v~~~~~~ 49 (369)
....+.+++.+||+||.|. .+. +..+++.+ ++|.+.++...
T Consensus 36 ~~al~~~~~~~~dlii~D~~~p~~~g~~~~~~lr~~~~~~ii~~t~~~ 83 (120)
T 3f6p_A 36 NEAVEMVEELQPDLILLDIMLPNKDGVEVCREVRKKYDMPIIMLTAKD 83 (120)
T ss_dssp HHHHHHHHTTCCSEEEEETTSTTTHHHHHHHHHHTTCCSCEEEEEESS
T ss_pred HHHHHHHhhCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCEEEEECCC
Confidence 3445566677899999998 553 44455443 68888776543
No 94
>2hbv_A 2-amino-3-carboxymuconate 6-semialdehyde decarbox; ACMSD, TIM-barrel, decarboxylase, metaloenzyme, lyase; 1.65A {Pseudomonas fluorescens} SCOP: c.1.9.15 PDB: 2hbx_A
Probab=41.12 E-value=54 Score=29.28 Aligned_cols=71 Identities=8% Similarity=0.090 Sum_probs=40.9
Q ss_pred hhhhcCcceeEeCCCCCCCCCCCchhHHHhhhccCCCCceEEEeeCCCc---cCCHHHHHHHHHHHHhcCCcEEEEECC
Q 017557 138 VESQFEKRVILAGPVLPEPPASVLEEEFEMLFSSFKAKSLIFCALGSEC---VLKKDQFQELILGFELTGLPFFAALKP 213 (369)
Q Consensus 138 ~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~---~~~~~~~~~~~~~l~~~~~~~i~~~~~ 213 (369)
.....|.++..+|.+.+..++ ...+++...++ .+-+++ -+|+.. ......+..+.+.+++.+.++++=.+.
T Consensus 107 ~~~~~p~r~~~~~~l~~~~~~-~a~~el~~~~~-~g~~Gv---~l~~~~~~~~l~d~~~~p~~~~~~e~~lpv~iH~~~ 180 (334)
T 2hbv_A 107 FAAHNPQRIKVLAQVPLQDLD-LACKEASRAVA-AGHLGI---QIGNHLGDKDLDDATLEAFLTHCANEDIPILVHPWD 180 (334)
T ss_dssp HHTTCTTTEEECBCCCTTSHH-HHHHHHHHHHH-HTCCCE---EEESCBTTBCTTSHHHHHHHHHHHHTTCCEEEECCS
T ss_pred HHhhCCCeEEEEEecCccCHH-HHHHHHHHHHH-cCCeEE---EECCCCCCCCCCcHHHHHHHHHHHHCCCEEEECCCC
Confidence 334456667776666543211 12356666663 232333 333332 245577889999999999987776543
No 95
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=40.88 E-value=52 Score=24.53 Aligned_cols=39 Identities=10% Similarity=0.112 Sum_probs=26.3
Q ss_pred HHHHHHhhcCCCEEEECC-CC--ChHHHHHHh-------CCCeEEEeCc
Q 017557 10 AIEAIVRDIKPNIVFFDF-TY--WLPSLARKL-------GIKSIAFVTV 48 (369)
Q Consensus 10 ~l~~~l~~~~pD~vI~D~-~~--~~~~~A~~l-------giP~v~~~~~ 48 (369)
...+.++..+||+||.|. .+ -+..+++.+ ++|.+.++..
T Consensus 38 ~al~~l~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~ls~~ 86 (138)
T 3c3m_A 38 ECLEALNATPPDLVLLDIMMEPMDGWETLERIKTDPATRDIPVLMLTAK 86 (138)
T ss_dssp HHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEESS
T ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHcCcccCCCCEEEEECC
Confidence 444556667899999998 54 355555544 5788877654
No 96
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=40.82 E-value=30 Score=30.20 Aligned_cols=40 Identities=13% Similarity=0.049 Sum_probs=31.3
Q ss_pred HHHHHHHhhcCCCEEEECC-CC------ChHHHHHHhCCCeEEEeCc
Q 017557 9 PAIEAIVRDIKPNIVFFDF-TY------WLPSLARKLGIKSIAFVTV 48 (369)
Q Consensus 9 ~~l~~~l~~~~pD~vI~D~-~~------~~~~~A~~lgiP~v~~~~~ 48 (369)
.-|.+++++.+||+|+.-. .. .+..+|.+||+|.++....
T Consensus 106 ~~La~~i~~~~~dlVl~G~~s~d~d~~~v~p~lA~~L~~~~vt~v~~ 152 (255)
T 1efv_B 106 RVLAKLAEKEKVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFASQ 152 (255)
T ss_dssp HHHHHHHHHHTCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEEE
T ss_pred HHHHHHHHhcCCCEEEEeCcccCCchhhHHHHHHHHhCCCcccceEE
Confidence 3456666667899999887 42 6789999999999997653
No 97
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=40.24 E-value=23 Score=33.76 Aligned_cols=35 Identities=20% Similarity=0.224 Sum_probs=28.9
Q ss_pred HHHHHHHhhcCCCEEEECCCCChHHHHHHhCCCeEEE
Q 017557 9 PAIEAIVRDIKPNIVFFDFTYWLPSLARKLGIKSIAF 45 (369)
Q Consensus 9 ~~l~~~l~~~~pD~vI~D~~~~~~~~A~~lgiP~v~~ 45 (369)
.++++++++.+||++|... ....+|+++|||++.+
T Consensus 365 ~~le~~i~~~~pDllig~~--~~~~~a~k~gip~~~~ 399 (458)
T 3pdi_B 365 EDLEHAARAGQAQLVIGNS--HALASARRLGVPLLRA 399 (458)
T ss_dssp HHHHHHHHHHTCSEEEECT--THHHHHHHTTCCEEEC
T ss_pred HHHHHHHHhcCCCEEEECh--hHHHHHHHcCCCEEEe
Confidence 3578888889999999875 3467999999999864
No 98
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=39.90 E-value=72 Score=22.59 Aligned_cols=40 Identities=13% Similarity=0.001 Sum_probs=26.2
Q ss_pred HHHHHHHhhcCCCEEEECC-CC--ChHHHHHHh-----CCCeEEEeCc
Q 017557 9 PAIEAIVRDIKPNIVFFDF-TY--WLPSLARKL-----GIKSIAFVTV 48 (369)
Q Consensus 9 ~~l~~~l~~~~pD~vI~D~-~~--~~~~~A~~l-----giP~v~~~~~ 48 (369)
....+.+++.+||+||.|. .+ .+..+.+++ ++|.+.++..
T Consensus 35 ~~a~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 82 (116)
T 3a10_A 35 EEALKKFFSGNYDLVILDIEMPGISGLEVAGEIRKKKKDAKIILLTAY 82 (116)
T ss_dssp HHHHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESC
T ss_pred HHHHHHHhcCCCCEEEEECCCCCCCHHHHHHHHHccCCCCeEEEEECC
Confidence 3444555667899999998 54 355555443 5788777654
No 99
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=39.54 E-value=51 Score=24.01 Aligned_cols=41 Identities=24% Similarity=0.245 Sum_probs=27.3
Q ss_pred HHHHHHHhhcCCCEEEECC-CC--ChHHHHHHh-----CCCeEEEeCch
Q 017557 9 PAIEAIVRDIKPNIVFFDF-TY--WLPSLARKL-----GIKSIAFVTVS 49 (369)
Q Consensus 9 ~~l~~~l~~~~pD~vI~D~-~~--~~~~~A~~l-----giP~v~~~~~~ 49 (369)
....+.+++.+||+||.|. .+ -+..+++++ ++|.+.++...
T Consensus 37 ~~~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 85 (126)
T 1dbw_A 37 EAFLAFAPDVRNGVLVTDLRMPDMSGVELLRNLGDLKINIPSIVITGHG 85 (126)
T ss_dssp HHHHHHGGGCCSEEEEEECCSTTSCHHHHHHHHHHTTCCCCEEEEECTT
T ss_pred HHHHHHHhcCCCCEEEEECCCCCCCHHHHHHHHHhcCCCCCEEEEECCC
Confidence 3445556667899999998 54 455555544 57888876543
No 100
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=39.46 E-value=50 Score=25.28 Aligned_cols=40 Identities=18% Similarity=0.143 Sum_probs=26.7
Q ss_pred HHHHHHHhhcCCCEEEECC-CC--ChHHHHHHh-------CCCeEEEeCc
Q 017557 9 PAIEAIVRDIKPNIVFFDF-TY--WLPSLARKL-------GIKSIAFVTV 48 (369)
Q Consensus 9 ~~l~~~l~~~~pD~vI~D~-~~--~~~~~A~~l-------giP~v~~~~~ 48 (369)
....+.+++.+||+||.|. .+ -+..+++.+ ++|.+.++..
T Consensus 41 ~~al~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~ 90 (154)
T 3gt7_A 41 REAVRFLSLTRPDLIISDVLMPEMDGYALCRWLKGQPDLRTIPVILLTIL 90 (154)
T ss_dssp HHHHHHHTTCCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEECC
T ss_pred HHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCCCcCCCCEEEEECC
Confidence 3455566677899999998 44 355555443 6788887753
No 101
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=39.35 E-value=49 Score=25.21 Aligned_cols=42 Identities=7% Similarity=0.035 Sum_probs=27.9
Q ss_pred HHHHHHHhhcCCCEEEECC-CC--ChHHHHHHh-----CCCeEEEeCchH
Q 017557 9 PAIEAIVRDIKPNIVFFDF-TY--WLPSLARKL-----GIKSIAFVTVSP 50 (369)
Q Consensus 9 ~~l~~~l~~~~pD~vI~D~-~~--~~~~~A~~l-----giP~v~~~~~~~ 50 (369)
....+.+++.+||+||.|. .+ -+..+++.+ ++|.+.++...-
T Consensus 41 ~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~ 90 (154)
T 2rjn_A 41 LDALEALKGTSVQLVISDMRMPEMGGEVFLEQVAKSYPDIERVVISGYAD 90 (154)
T ss_dssp HHHHHHHTTSCCSEEEEESSCSSSCHHHHHHHHHHHCTTSEEEEEECGGG
T ss_pred HHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 4455666667899999998 54 345555443 688888776543
No 102
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=38.91 E-value=94 Score=27.74 Aligned_cols=117 Identities=11% Similarity=0.048 Sum_probs=69.0
Q ss_pred HHHHHHHHHHHhcCCcEEEEECCCCCCCccccCCchhHHHHhcCCCeeEecccChHHhhcCCCccceeecCCCchHHHHH
Q 017557 191 DQFQELILGFELTGLPFFAALKPPTGHDTIESALPEGFEERVKGRGFVHGGWVQQQLILKHPSVGCFVTHCGSGSLSEAM 270 (369)
Q Consensus 191 ~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~~~~~ItHgG~~s~~Eal 270 (369)
+.-.++++.|+..+..+++..+.. .-+|+.+.+..+.+-+-+ ||++ .=...|++.+..|+
T Consensus 168 ~~~~~~~~~l~~~~~DliVlagym-------~IL~~~~l~~~~~~~INi-----------HpSl--LP~frG~~p~~~Ai 227 (302)
T 3o1l_A 168 PAFAEVSRLVGHHQADVVVLARYM-------QILPPQLCREYAHQVINI-----------HHSF--LPSFVGAKPYHQAS 227 (302)
T ss_dssp HHHHHHHHHHHHTTCSEEEESSCC-------SCCCTTHHHHTTTCEEEE-----------ESSC--TTSSCSSCHHHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEHhHhh-------hhcCHHHHhhhhCCeEEe-----------Cccc--ccCCCCccHHHHHH
Confidence 334557777877788888887653 456776665543322222 4444 44456999999999
Q ss_pred HhCCccccccccc--chhHHHHHHhhhcceEEEEeecCCCCccCHHHHHHHHHHHhccCCcchHHHHHHHHHH
Q 017557 271 VNECQLVLLPNVG--DQIINSRLMGEDLKVGVEVERGDEDGLFTRDGVCKAVKAVMDDDSEVGKDARQNHAEL 341 (369)
Q Consensus 271 ~~GvP~i~~P~~~--DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~a~~l 341 (369)
..|+...++-.+. +..+-+.-+.+. -+.+... -|.++|.+.+.++- -.-|.+..+.+
T Consensus 228 ~~G~k~tG~TvH~v~~~lD~GpII~Q~---~v~I~~~-----dt~~~L~~r~~~~e------~~~l~~av~~~ 286 (302)
T 3o1l_A 228 LRGVKLIGATCHYVTEELDAGPIIEQD---VVRVSHR-----DSIENMVRFGRDVE------KMVLARGLRAH 286 (302)
T ss_dssp HHTCSEEEEEEEECCSSTTCSCEEEEE---EEECCTT-----CCHHHHHHHHHHHH------HHHHHHHHHHH
T ss_pred HcCCCeEEEEEEEECCCCcCCCeEEEE---EEecCCC-----CCHHHHHHHHHHHH------HHHHHHHHHHH
Confidence 9999988887642 222222111111 1223332 58888888887654 24555555544
No 103
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=38.88 E-value=26 Score=30.53 Aligned_cols=40 Identities=18% Similarity=0.164 Sum_probs=31.4
Q ss_pred HHHHHHHhhcCCCEEEECC-CC------ChHHHHHHhCCCeEEEeCc
Q 017557 9 PAIEAIVRDIKPNIVFFDF-TY------WLPSLARKLGIKSIAFVTV 48 (369)
Q Consensus 9 ~~l~~~l~~~~pD~vI~D~-~~------~~~~~A~~lgiP~v~~~~~ 48 (369)
.-|.+++++.+||+|+.-. .. .+..+|.+||+|.++....
T Consensus 103 ~~La~~i~~~~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~~ 149 (252)
T 1efp_B 103 KILAAVARAEGTELIIAGKQAIDNDMNATGQMLAAILGWAQATFASK 149 (252)
T ss_dssp HHHHHHHHHHTCSEEEEESCCTTTCCCCHHHHHHHHHTCEEEEEEEE
T ss_pred HHHHHHHHhcCCCEEEEcCCccCCchhhHHHHHHHHhCCCccccEEE
Confidence 4556666667899999877 42 6789999999999997653
No 104
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=38.77 E-value=52 Score=29.21 Aligned_cols=115 Identities=10% Similarity=0.064 Sum_probs=68.8
Q ss_pred HHHHHHHHhcCCcEEEEECCCCCCCccccCCchhHHHHhcCCCeeEecccChHHhhcCCCccceeecCCCchHHHHHHhC
Q 017557 194 QELILGFELTGLPFFAALKPPTGHDTIESALPEGFEERVKGRGFVHGGWVQQQLILKHPSVGCFVTHCGSGSLSEAMVNE 273 (369)
Q Consensus 194 ~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~~~~~ItHgG~~s~~Eal~~G 273 (369)
.++++.|+..+..+++..+.. .-+|+.+.+..+.+-+-+ ||++ .=...|++.+..|+..|
T Consensus 156 ~~~~~~l~~~~~Dlivlagy~-------~il~~~~l~~~~~~~iNi-----------HpSl--LP~~rG~~p~~~A~~~G 215 (288)
T 3obi_A 156 AAITALIAQTHTDLVVLARYM-------QILSDEMSARLAGRCINI-----------HHSF--LPGFKGAKPYHQAFDRG 215 (288)
T ss_dssp HHHHHHHHHHTCCEEEESSCC-------SCCCHHHHHHTTTSEEEE-----------EEEC--SSCCCSSCHHHHHHHHT
T ss_pred HHHHHHHHhcCCCEEEhhhhh-------hhCCHHHHhhhcCCeEEe-----------Cccc--ccCCCCchHHHHHHHcC
Confidence 457788887788888887653 567777766554332222 3333 33456999999999999
Q ss_pred Cccccccccc--chhHHHHHHhhhcceEEEEeecCCCCccCHHHHHHHHHHHhccCCcchHHHHHHHHHHH
Q 017557 274 CQLVLLPNVG--DQIINSRLMGEDLKVGVEVERGDEDGLFTRDGVCKAVKAVMDDDSEVGKDARQNHAELR 342 (369)
Q Consensus 274 vP~i~~P~~~--DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~a~~l~ 342 (369)
+...++-.+. +..+-+.-+.+. -+.+... -|.++|.+.+.++-. .-|.+..+.+.
T Consensus 216 ~~~~G~Tvh~v~~~~D~GpIi~Q~---~v~i~~~-----dt~~~L~~r~~~~e~------~~l~~av~~~~ 272 (288)
T 3obi_A 216 VKLIGATAHYVTSALDEGPIIDQD---VERISHR-----DTPADLVRKGRDIER------RVLSRALHYHL 272 (288)
T ss_dssp CSEEEEEEEECCSSTTCSCEEEEE---EEECCTT-----CCHHHHHHHHHHHHH------HHHHHHHHHHH
T ss_pred CCEEEEEEEEECCCCcCCCeEEEE---EEecCCC-----CCHHHHHHHHHHHHH------HHHHHHHHHHH
Confidence 9988887643 222222211111 2223332 588888888876643 45555555443
No 105
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=38.63 E-value=58 Score=23.31 Aligned_cols=41 Identities=17% Similarity=0.195 Sum_probs=27.0
Q ss_pred HHHHHHHhhcCCCEEEECC-CC--ChHHHHHHh-----CCCeEEEeCch
Q 017557 9 PAIEAIVRDIKPNIVFFDF-TY--WLPSLARKL-----GIKSIAFVTVS 49 (369)
Q Consensus 9 ~~l~~~l~~~~pD~vI~D~-~~--~~~~~A~~l-----giP~v~~~~~~ 49 (369)
....+.+++.+||+||.|. .+ -+..+++++ ++|.+.++...
T Consensus 37 ~~a~~~~~~~~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 85 (120)
T 1tmy_A 37 REAVEKYKELKPDIVTMDITMPEMNGIDAIKEIMKIDPNAKIIVCSAMG 85 (120)
T ss_dssp HHHHHHHHHHCCSEEEEECSCGGGCHHHHHHHHHHHCTTCCEEEEECTT
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCcHHHHHHHHHhhCCCCeEEEEeCCC
Confidence 3444555666899999998 54 355555543 58888876543
No 106
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=38.60 E-value=68 Score=23.42 Aligned_cols=40 Identities=13% Similarity=-0.037 Sum_probs=26.0
Q ss_pred HHHHHHHhhcCCCEEEECC-CC--ChHHHHHHh-------CCCeEEEeCc
Q 017557 9 PAIEAIVRDIKPNIVFFDF-TY--WLPSLARKL-------GIKSIAFVTV 48 (369)
Q Consensus 9 ~~l~~~l~~~~pD~vI~D~-~~--~~~~~A~~l-------giP~v~~~~~ 48 (369)
....+.+++.+||+||.|. .+ -+..+.+.+ ++|.+.++..
T Consensus 37 ~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~~ 86 (133)
T 3nhm_A 37 ASGLQQALAHPPDVLISDVNMDGMDGYALCGHFRSEPTLKHIPVIFVSGY 86 (133)
T ss_dssp HHHHHHHHHSCCSEEEECSSCSSSCHHHHHHHHHHSTTTTTCCEEEEESC
T ss_pred HHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhCCccCCCCEEEEeCC
Confidence 3445566677899999998 44 344444322 6788887654
No 107
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=38.02 E-value=58 Score=29.96 Aligned_cols=35 Identities=17% Similarity=0.232 Sum_probs=25.9
Q ss_pred eEEEeeCCCccCCHHHHHHHHHHHHhcCCcEEEEECC
Q 017557 177 LIFCALGSECVLKKDQFQELILGFELTGLPFFAALKP 213 (369)
Q Consensus 177 ~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~ 213 (369)
+++++.||.+ ...-+..++++|.+.|.++.+.+..
T Consensus 3 Ili~~~gt~G--hv~p~~~La~~L~~~Gh~V~v~~~~ 37 (404)
T 3h4t_A 3 VLITGCGSRG--DTEPLVALAARLRELGADARMCLPP 37 (404)
T ss_dssp EEEEEESSHH--HHHHHHHHHHHHHHTTCCEEEEECG
T ss_pred EEEEeCCCCc--cHHHHHHHHHHHHHCCCeEEEEeCH
Confidence 6777888764 2344667888898889998888754
No 108
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=37.90 E-value=21 Score=34.41 Aligned_cols=35 Identities=23% Similarity=0.255 Sum_probs=29.1
Q ss_pred HHHHHHHHhhcCCCEEEECCCCChHHHHHHhCCCeEE
Q 017557 8 EPAIEAIVRDIKPNIVFFDFTYWLPSLARKLGIKSIA 44 (369)
Q Consensus 8 ~~~l~~~l~~~~pD~vI~D~~~~~~~~A~~lgiP~v~ 44 (369)
..++++.+++.+||++|... ....+|+++|||++-
T Consensus 406 ~~el~~~i~~~~pDL~ig~~--~~~~ia~k~gIP~~~ 440 (492)
T 3u7q_A 406 GYEFEEFVKRIKPDLIGSGI--KEKFIFQKMGIPFRE 440 (492)
T ss_dssp HHHHHHHHHHHCCSEEEECH--HHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHhcCCcEEEeCc--chhHHHHHcCCCEEe
Confidence 55788888889999999976 236789999999984
No 109
>2f6k_A Metal-dependent hydrolase; metal dependent hydrolyse, aminohydro_2, ACMDS, ACMS, trypto metabolism, quinolinic acid, QUIN; 2.50A {Lactobacillus plantarum} SCOP: c.1.9.15
Probab=37.70 E-value=1.6e+02 Score=25.48 Aligned_cols=70 Identities=1% Similarity=-0.085 Sum_probs=38.7
Q ss_pred hhcCcceeEeCCCCCCCCCCCchhHHHhhhccCCCCceEEEeeCCCc---cCCHHHHHHHHHHHHhcCCcEEEEECC
Q 017557 140 SQFEKRVILAGPVLPEPPASVLEEEFEMLFSSFKAKSLIFCALGSEC---VLKKDQFQELILGFELTGLPFFAALKP 213 (369)
Q Consensus 140 ~~~~~~~~~vGp~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~---~~~~~~~~~~~~~l~~~~~~~i~~~~~ 213 (369)
...|.++..+|-+-.... ....+++.++++..+ ++-|-+|... ......+..+++.+++.+.++++=.+.
T Consensus 85 ~~~p~r~~~~~~~p~~~~-~~~~~el~~~~~~~g---~~gi~~~~~~~~~~~~~~~~~~~~~~a~~~~lpv~iH~~~ 157 (307)
T 2f6k_A 85 QQYPDQLGYLASLPIPYE-LDAVKTVQQALDQDG---ALGVTVPTNSRGLYFGSPVLERVYQELDARQAIVALHPNE 157 (307)
T ss_dssp HHCTTTEEEEECCCTTCH-HHHHHHHHHHHHTSC---CSEEEEESEETTEETTCGGGHHHHHHHHTTTCEEEEECCC
T ss_pred HhCccceeEEEeCCCCCH-HHHHHHHHHHHhccC---CcEEEEeccCCCCCCCcHhHHHHHHHHHHcCCeEEECCCC
Confidence 346666777764432211 112356777775433 2323444432 234466888888888888887765443
No 110
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=37.26 E-value=62 Score=28.65 Aligned_cols=115 Identities=10% Similarity=0.074 Sum_probs=66.4
Q ss_pred HHHHHHHHhcCCcEEEEECCCCCCCccccCCchhHHHHhcCCCeeEecccChHHhhcCCCccceeecCCCchHHHHHHhC
Q 017557 194 QELILGFELTGLPFFAALKPPTGHDTIESALPEGFEERVKGRGFVHGGWVQQQLILKHPSVGCFVTHCGSGSLSEAMVNE 273 (369)
Q Consensus 194 ~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~~~~~ItHgG~~s~~Eal~~G 273 (369)
.++++.++..+..+++..+.. .-+|+.+.+..+.+-+-+ ||++ .=...|++.+..|+..|
T Consensus 156 ~~~~~~l~~~~~Dlivla~y~-------~il~~~~l~~~~~~~iNi-----------HpSl--LP~~rG~~p~~~Ai~~G 215 (286)
T 3n0v_A 156 RKVLQVIEETGAELVILARYM-------QVLSPELCRRLDGWAINI-----------HHSL--LPGFKGAKPYHQAYNKG 215 (286)
T ss_dssp HHHHHHHHHHTCSEEEESSCC-------SCCCHHHHHHTTTSEEEE-----------EECS--STTCCCSCHHHHHHHHT
T ss_pred HHHHHHHHhcCCCEEEecccc-------cccCHHHHhhhcCCeEEe-----------cccc--ccCCCCccHHHHHHHcC
Confidence 357777777777888877643 456776665543322222 3333 33356899999999999
Q ss_pred Cccccccccc--chhHHHHHHhhhcceEEEEeecCCCCccCHHHHHHHHHHHhccCCcchHHHHHHHHHHH
Q 017557 274 CQLVLLPNVG--DQIINSRLMGEDLKVGVEVERGDEDGLFTRDGVCKAVKAVMDDDSEVGKDARQNHAELR 342 (369)
Q Consensus 274 vP~i~~P~~~--DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~a~~l~ 342 (369)
+...++-.+. +..+-+.-+.+. -+.+... -|.++|.+.+.++-. .-|.+..+.+.
T Consensus 216 ~~~~G~Tvh~v~~~lD~GpIi~Q~---~~~i~~~-----dt~~~L~~r~~~~e~------~~l~~av~~~~ 272 (286)
T 3n0v_A 216 VKMVGATAHYINNDLDEGPIIAQG---VEVVDHS-----HYPEDLIAKGRDIEC------LTLARAVGYHI 272 (286)
T ss_dssp CSEEEEEEEECCSSTTCSCEEEEE---EEECCTT-----CCHHHHHHHHHHHHH------HHHHHHHHHHH
T ss_pred CCeEEEEEEEEcCCCCCCceeEEE---EEEcCCC-----CCHHHHHHHHHHHHH------HHHHHHHHHHH
Confidence 9988887653 222222111111 1222332 588888888876542 45555555443
No 111
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=37.16 E-value=1e+02 Score=25.94 Aligned_cols=116 Identities=13% Similarity=0.103 Sum_probs=65.1
Q ss_pred HHHHHHHHhcCCcEEEEECCCCCCCccccCCchhHHHHhcCCCeeEecccChHHhhcCCCccceeecCCCchHHHHHHhC
Q 017557 194 QELILGFELTGLPFFAALKPPTGHDTIESALPEGFEERVKGRGFVHGGWVQQQLILKHPSVGCFVTHCGSGSLSEAMVNE 273 (369)
Q Consensus 194 ~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~~~~~ItHgG~~s~~Eal~~G 273 (369)
.++++.|+..+..+++..+.. .-+|+.+.+..+.+-+-+ |+++ .=..-|++.+..|+.+|
T Consensus 79 ~~~~~~l~~~~~Dlivlagy~-------~iL~~~~l~~~~~~~iNi-----------HpSL--LP~yrG~~pi~~Ai~~G 138 (215)
T 3da8_A 79 VAITAATAAHEPDLVVSAGFM-------RILGPQFLSRFYGRTLNT-----------HPAL--LPAFPGTHGVADALAYG 138 (215)
T ss_dssp HHHHHHHHTTCCSEEEEEECC-------SCCCHHHHHHHTTTEEEE-----------ESSC--TTSSCSTTHHHHHHHHT
T ss_pred HHHHHHHHhhCCCEEEEcCch-------hhCCHHHHhhccCCeEEe-----------Cccc--ccCCCCchHHHHHHHcC
Confidence 346666766677777776542 456666655443222222 3443 33446889999999999
Q ss_pred Cccccccccc--chhHHHHHHhhhcceEEEEeecCCCCccCHHHHHHHHHHHhccCCcchHHHHHHHHHHHH
Q 017557 274 CQLVLLPNVG--DQIINSRLMGEDLKVGVEVERGDEDGLFTRDGVCKAVKAVMDDDSEVGKDARQNHAELRE 343 (369)
Q Consensus 274 vP~i~~P~~~--DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~a~~l~~ 343 (369)
....++-.+. +..+.+.-+.+. -+.+..+ -|.++|.+.+.++- -+-|.+..+.+.+
T Consensus 139 ~~~tGvTvh~v~~~lD~G~Ii~Q~---~v~I~~~-----dt~~~L~~rl~~~~------~~ll~~~l~~~~~ 196 (215)
T 3da8_A 139 VKVTGATVHLVDAGTDTGPILAQQ---PVPVLDG-----DDEETLHERIKVTE------RRLLVAAVAALAT 196 (215)
T ss_dssp CSEEEEEEEECCSSSSCSCEEEEE---EEECCTT-----CCHHHHHHHHHHHH------HHHHHHHHHHHHH
T ss_pred CCeEEEEEEEEcCCCCCCCEEEEE---EeecCCC-----CCHHHHHHHHHHHH------HHHHHHHHHHHHc
Confidence 9888777642 222222222211 1223332 58888888776543 3556665555543
No 112
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=37.11 E-value=57 Score=29.00 Aligned_cols=115 Identities=12% Similarity=0.101 Sum_probs=67.4
Q ss_pred HHHHHHHHhcCCcEEEEECCCCCCCccccCCchhHHHHhcCCCeeEecccChHHhhcCCCccceeecCCCchHHHHHHhC
Q 017557 194 QELILGFELTGLPFFAALKPPTGHDTIESALPEGFEERVKGRGFVHGGWVQQQLILKHPSVGCFVTHCGSGSLSEAMVNE 273 (369)
Q Consensus 194 ~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~~~~~ItHgG~~s~~Eal~~G 273 (369)
.++++.++..+..+++..+.. .-+|+.+.+..+.+-+-+ |+++ .=...|++.+..|+..|
T Consensus 161 ~~~~~~l~~~~~Dlivla~y~-------~il~~~~l~~~~~~~iNi-----------HpSl--LP~~rG~~p~~~Ai~~G 220 (292)
T 3lou_A 161 AQWLDVFETSGAELVILARYM-------QVLSPEASARLANRAINI-----------HHSF--LPGFKGAKPYHQAHARG 220 (292)
T ss_dssp HHHHHHHHHHTCSEEEESSCC-------SCCCHHHHHHTTTSEEEE-----------EEEC--SSCCCSSCHHHHHHHHT
T ss_pred HHHHHHHHHhCCCEEEecCch-------hhCCHHHHhhhcCCeEEe-----------CCCc--CcCCCCccHHHHHHHcC
Confidence 457777777777888887653 457777766543322222 3333 33456899999999999
Q ss_pred Cccccccccc--chhHHHHHHhhhcceEEEEeecCCCCccCHHHHHHHHHHHhccCCcchHHHHHHHHHHH
Q 017557 274 CQLVLLPNVG--DQIINSRLMGEDLKVGVEVERGDEDGLFTRDGVCKAVKAVMDDDSEVGKDARQNHAELR 342 (369)
Q Consensus 274 vP~i~~P~~~--DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~a~~l~ 342 (369)
+...++-.+. +..+-+.-+.+. -+.+... -|.++|.+.+.++-. .-|.+..+.+.
T Consensus 221 ~~~~G~Tvh~v~~~lD~G~Ii~Q~---~v~i~~~-----dt~~~L~~r~~~~e~------~~l~~av~~~~ 277 (292)
T 3lou_A 221 VKLIGATAHFVTDDLDEGPIIEQV---VERVDHS-----YRPEQLLAVGRDVEC------ITLARAVKAFI 277 (292)
T ss_dssp CSEEEEEEEECCSSTTCSCEEEEE---EEECCTT-----CCHHHHHHHHHHHHH------HHHHHHHHHHH
T ss_pred CCeEEEEEEEEcCCCcCCCEEEEE---EEEcCCC-----CCHHHHHHHHHHHHH------HHHHHHHHHHH
Confidence 9988887653 222222211111 2223332 588888888866542 45555555443
No 113
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=36.93 E-value=64 Score=23.92 Aligned_cols=41 Identities=15% Similarity=-0.026 Sum_probs=26.9
Q ss_pred HHHHHHHhhcCCCEEEECC-CC--ChHHHHHHh-------CCCeEEEeCch
Q 017557 9 PAIEAIVRDIKPNIVFFDF-TY--WLPSLARKL-------GIKSIAFVTVS 49 (369)
Q Consensus 9 ~~l~~~l~~~~pD~vI~D~-~~--~~~~~A~~l-------giP~v~~~~~~ 49 (369)
....+.+++.+||+||.|. .+ -+..+.+.+ ++|.+.++...
T Consensus 40 ~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~ 90 (140)
T 3grc_A 40 AQALEQVARRPYAAMTVDLNLPDQDGVSLIRALRRDSRTRDLAIVVVSANA 90 (140)
T ss_dssp HHHHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHTSGGGTTCEEEEECTTH
T ss_pred HHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCcccCCCCEEEEecCC
Confidence 3445566677899999998 44 355555433 57877776544
No 114
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=36.92 E-value=46 Score=24.69 Aligned_cols=41 Identities=12% Similarity=0.280 Sum_probs=27.2
Q ss_pred HHHHHHHhhcCCCEEEECC-CC-------ChHHHHHHh-----CCCeEEEeCch
Q 017557 9 PAIEAIVRDIKPNIVFFDF-TY-------WLPSLARKL-----GIKSIAFVTVS 49 (369)
Q Consensus 9 ~~l~~~l~~~~pD~vI~D~-~~-------~~~~~A~~l-----giP~v~~~~~~ 49 (369)
....+.+++.+||+||.|. .+ -+..+.+.+ ++|.+.++...
T Consensus 37 ~~a~~~l~~~~~dlvi~d~~~~~~~~~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 90 (140)
T 2qr3_A 37 VSLSTVLREENPEVVLLDMNFTSGINNGNEGLFWLHEIKRQYRDLPVVLFTAYA 90 (140)
T ss_dssp HHHHHHHHHSCEEEEEEETTTTC-----CCHHHHHHHHHHHCTTCCEEEEEEGG
T ss_pred HHHHHHHHcCCCCEEEEeCCcCCCCCCCccHHHHHHHHHhhCcCCCEEEEECCC
Confidence 4455666677899999998 65 234444433 68888877544
No 115
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=36.77 E-value=63 Score=23.19 Aligned_cols=41 Identities=17% Similarity=0.208 Sum_probs=27.3
Q ss_pred HHHHHHHhhcCCCEEEECC-CC--ChHHHHHHh----CCCeEEEeCch
Q 017557 9 PAIEAIVRDIKPNIVFFDF-TY--WLPSLARKL----GIKSIAFVTVS 49 (369)
Q Consensus 9 ~~l~~~l~~~~pD~vI~D~-~~--~~~~~A~~l----giP~v~~~~~~ 49 (369)
....+.+++.+||+||.|. .+ -+..+++.+ .+|.+.++...
T Consensus 36 ~~~~~~~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~ 83 (122)
T 1zgz_A 36 AGLREIMQNQSVDLILLDINLPDENGLMLTRALRERSTVGIILVTGRS 83 (122)
T ss_dssp HHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHTTCCCEEEEEESSC
T ss_pred HHHHHHHhcCCCCEEEEeCCCCCCChHHHHHHHHhcCCCCEEEEECCC
Confidence 3455566667899999998 54 455666654 57777766543
No 116
>3dez_A OPRT, oprtase, orotate phosphoribosyltransferase; glycosyltransferase, MAGN pyrimidine biosynthesis; 2.40A {Streptococcus mutans}
Probab=36.61 E-value=33 Score=29.72 Aligned_cols=41 Identities=10% Similarity=0.078 Sum_probs=28.7
Q ss_pred hcHHHHHHHHhhc--CCCEEE-ECC--CCChHHHHHHhCCCeEEEe
Q 017557 6 LTEPAIEAIVRDI--KPNIVF-FDF--TYWLPSLARKLGIKSIAFV 46 (369)
Q Consensus 6 ~~~~~l~~~l~~~--~pD~vI-~D~--~~~~~~~A~~lgiP~v~~~ 46 (369)
.+...+.+.+++. ++|+|+ .+. .+++..+|+.+|+|++..-
T Consensus 85 ~l~~~la~~i~~~~~~~DvIvg~~~gGi~~A~~lA~~L~~p~~~vr 130 (243)
T 3dez_A 85 LIENGFVETIKEAFPEVEVIAGTATAGIPHGAIIADKMNLPLAYIR 130 (243)
T ss_dssp HHHHHHHHHHHHHCTTCCEEEEETTTTHHHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHHHhhCCCCCEEEEecCchHHHHHHHHHHcCCCEEEEE
Confidence 3444555555554 789887 444 5788999999999987643
No 117
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=36.60 E-value=59 Score=24.62 Aligned_cols=41 Identities=10% Similarity=0.041 Sum_probs=27.5
Q ss_pred HHHHHHHhhcCCCEEEECC-CC--ChHHHHHHh-----CCCeEEEeCch
Q 017557 9 PAIEAIVRDIKPNIVFFDF-TY--WLPSLARKL-----GIKSIAFVTVS 49 (369)
Q Consensus 9 ~~l~~~l~~~~pD~vI~D~-~~--~~~~~A~~l-----giP~v~~~~~~ 49 (369)
....+.+++.+||+||.|. .+ -+..+++.+ ++|.+.++...
T Consensus 56 ~~al~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 104 (150)
T 4e7p_A 56 QEAIQLLEKESVDIAILDVEMPVKTGLEVLEWIRSEKLETKVVVVTTFK 104 (150)
T ss_dssp HHHHHHHTTSCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESCC
T ss_pred HHHHHHhhccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEeCCC
Confidence 4555666777899999998 43 355555543 57888776543
No 118
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=36.59 E-value=70 Score=23.27 Aligned_cols=41 Identities=10% Similarity=-0.083 Sum_probs=27.0
Q ss_pred HHHHHHHhhc-CCCEEEECC-CC---ChHHHHHHh-----CCCeEEEeCch
Q 017557 9 PAIEAIVRDI-KPNIVFFDF-TY---WLPSLARKL-----GIKSIAFVTVS 49 (369)
Q Consensus 9 ~~l~~~l~~~-~pD~vI~D~-~~---~~~~~A~~l-----giP~v~~~~~~ 49 (369)
....+.+++. +||+||.|. .+ .+..+++.+ ++|.+.++...
T Consensus 39 ~~a~~~l~~~~~~dlvi~d~~l~~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 89 (132)
T 2rdm_A 39 AKAIEMLKSGAAIDGVVTDIRFCQPPDGWQVARVAREIDPNMPIVYISGHA 89 (132)
T ss_dssp HHHHHHHHTTCCCCEEEEESCCSSSSCHHHHHHHHHHHCTTCCEEEEESSC
T ss_pred HHHHHHHHcCCCCCEEEEeeeCCCCCCHHHHHHHHHhcCCCCCEEEEeCCc
Confidence 3445566666 899999998 54 345555443 58888876543
No 119
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=36.52 E-value=52 Score=28.08 Aligned_cols=39 Identities=21% Similarity=0.295 Sum_probs=28.1
Q ss_pred HHHHHHHhhc--CCCEEEECC-CCC-------hHHHHHHhCCCeEEEeC
Q 017557 9 PAIEAIVRDI--KPNIVFFDF-TYW-------LPSLARKLGIKSIAFVT 47 (369)
Q Consensus 9 ~~l~~~l~~~--~pD~vI~D~-~~~-------~~~~A~~lgiP~v~~~~ 47 (369)
|.+.+++++. +||++++|- ... |..+-..+|+|+|.+.=
T Consensus 91 P~~l~al~~L~~~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtIGVAK 139 (225)
T 2w36_A 91 PLFLKAWEKLRTKPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGVAK 139 (225)
T ss_dssp HHHHHHHTTCCSCCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEEEEES
T ss_pred HHHHHHHHhcCCCCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEEEEEe
Confidence 4566666665 699999996 333 56677777999998753
No 120
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=36.46 E-value=61 Score=23.90 Aligned_cols=41 Identities=20% Similarity=0.268 Sum_probs=26.9
Q ss_pred HHHHHHHhhcCCCEEEECC-CC--ChHHHHHHh-----CCCeEEEeCch
Q 017557 9 PAIEAIVRDIKPNIVFFDF-TY--WLPSLARKL-----GIKSIAFVTVS 49 (369)
Q Consensus 9 ~~l~~~l~~~~pD~vI~D~-~~--~~~~~A~~l-----giP~v~~~~~~ 49 (369)
....+.+++.+||+||.|. .+ -+..+++.+ ++|.+.++...
T Consensus 39 ~~al~~~~~~~~dlvilD~~lp~~~g~~~~~~l~~~~~~~~ii~ls~~~ 87 (133)
T 3b2n_A 39 LDAMKLIEEYNPNVVILDIEMPGMTGLEVLAEIRKKHLNIKVIIVTTFK 87 (133)
T ss_dssp HHHHHHHHHHCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESCC
T ss_pred HHHHHHHhhcCCCEEEEecCCCCCCHHHHHHHHHHHCCCCcEEEEecCC
Confidence 3444556667899999998 54 355555544 57888776543
No 121
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=36.42 E-value=1.4e+02 Score=24.99 Aligned_cols=115 Identities=17% Similarity=0.128 Sum_probs=64.9
Q ss_pred HHHHHHHHhcCCcEEEEECCCCCCCccccCCchhHHHHhcCCCeeEecccChHHhhcCCCccceeecCCCchHHHHHHhC
Q 017557 194 QELILGFELTGLPFFAALKPPTGHDTIESALPEGFEERVKGRGFVHGGWVQQQLILKHPSVGCFVTHCGSGSLSEAMVNE 273 (369)
Q Consensus 194 ~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~~~~~ItHgG~~s~~Eal~~G 273 (369)
.++.+.++..+..+++..+.. .-+|+.+.+..+.+-+-+ ||++ .=...|++.+..|+.+|
T Consensus 69 ~~~~~~l~~~~~Dliv~a~y~-------~il~~~~l~~~~~~~iNi-----------HpSL--LP~yrG~~pi~~Ai~~G 128 (209)
T 1meo_A 69 SAIDLVLEEFSIDIVCLAGFM-------RILSGPFVQKWNGKMLNI-----------HPSL--LPSFKGSNAHEQALETG 128 (209)
T ss_dssp HHHHHHHHHTTCCEEEEESCC-------SCCCHHHHHHTTTSEEEE-----------ESSS--TTSSCSSCHHHHHHHHT
T ss_pred HHHHHHHHhcCCCEEEEcchh-------hhCCHHHHhhhcCCEEEE-----------ccCc--CcCCCCccHHHHHHHcC
Confidence 346666776777777777643 456666654433222222 3443 33456889999999999
Q ss_pred Cccccccccc--chhHHHHHHhhhcceEEEEeecCCCCccCHHHHHHHHHHHhccCCcchHHHHHHHHHHH
Q 017557 274 CQLVLLPNVG--DQIINSRLMGEDLKVGVEVERGDEDGLFTRDGVCKAVKAVMDDDSEVGKDARQNHAELR 342 (369)
Q Consensus 274 vP~i~~P~~~--DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~a~~l~ 342 (369)
....++-.+. +..+.+.-+.+. -+.+... -|.++|.+.+.++- .+-|.+..+.+.
T Consensus 129 ~~~tGvTvh~v~~~~D~G~Ii~Q~---~v~I~~~-----dt~~~L~~rl~~~~------~~ll~~~l~~~~ 185 (209)
T 1meo_A 129 VTVTGCTVHFVAEDVDAGQIILQE---AVPVKRG-----DTVATLSERVKLAE------HKIFPAALQLVA 185 (209)
T ss_dssp CSEEEEEEEECCC---CCCEEEEE---EEECCTT-----CCHHHHHHHHHHHH------HHHHHHHHHHHH
T ss_pred CCcEEEEEEEECCCCcCCCEEEEE---EEecCCC-----CCHHHHHHHHHHHH------HHHHHHHHHHHH
Confidence 9988777642 333332222211 1223332 47888888776553 355666655554
No 122
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=36.40 E-value=76 Score=22.52 Aligned_cols=40 Identities=10% Similarity=0.147 Sum_probs=26.3
Q ss_pred HHHHHHhhcCCCEEEECC-CC--ChHHHHHHh----CCCeEEEeCch
Q 017557 10 AIEAIVRDIKPNIVFFDF-TY--WLPSLARKL----GIKSIAFVTVS 49 (369)
Q Consensus 10 ~l~~~l~~~~pD~vI~D~-~~--~~~~~A~~l----giP~v~~~~~~ 49 (369)
...+.+++.+||++|.|. .+ .+..+++.+ .+|.+.++...
T Consensus 36 ~a~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~ 82 (120)
T 2a9o_A 36 EALEQFEAEQPDIIILDLMLPEIDGLEVAKTIRKTSSVPILMLSAKD 82 (120)
T ss_dssp HHHHHHHHHCCSEEEECSSCSSSCHHHHHHHHHHHCCCCEEEEESCC
T ss_pred HHHHHHHhCCCCEEEEeccCCCCCHHHHHHHHHhCCCCCEEEEecCC
Confidence 344455566899999998 54 355555443 68888876543
No 123
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=35.75 E-value=70 Score=28.95 Aligned_cols=103 Identities=17% Similarity=0.178 Sum_probs=68.3
Q ss_pred CceEEEeeCCCccCCHHHHHHHHHHHHhcCCcEEEEECCCCCCCccccCCchhHHHHhcCCCeeEecccChHHhhcCCCc
Q 017557 175 KSLIFCALGSECVLKKDQFQELILGFELTGLPFFAALKPPTGHDTIESALPEGFEERVKGRGFVHGGWVQQQLILKHPSV 254 (369)
Q Consensus 175 ~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~~ 254 (369)
+.+-.|.+|.++ +++++.+...+.+++..-... .+...+ .++ .+.+..++|+.+++
T Consensus 142 ~tvGIiG~G~IG-------~~va~~~~~fg~~v~~~d~~~----------~~~~~~----~~~---~~~~l~ell~~sDi 197 (334)
T 3kb6_A 142 LTLGVIGTGRIG-------SRVAMYGLAFGMKVLCYDVVK----------REDLKE----KGC---VYTSLDELLKESDV 197 (334)
T ss_dssp SEEEEECCSHHH-------HHHHHHHHHTTCEEEEECSSC----------CHHHHH----TTC---EECCHHHHHHHCSE
T ss_pred cEEEEECcchHH-------HHHHHhhcccCceeeecCCcc----------chhhhh----cCc---eecCHHHHHhhCCE
Confidence 447788999888 667777777788876542211 111111 122 35677889999999
Q ss_pred cceeecCCCchHHHHHHhCCccccccccc--chhHHHHHHhhhcceEEEEeecCCCCccCHHHHHHHHHH
Q 017557 255 GCFVTHCGSGSLSEAMVNECQLVLLPNVG--DQIINSRLMGEDLKVGVEVERGDEDGLFTRDGVCKAVKA 322 (369)
Q Consensus 255 ~~~ItHgG~~s~~Eal~~GvP~i~~P~~~--DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~~l~~ai~~ 322 (369)
++.|+ |+.. ....|++.+... +-|-.+---..++.+..+.|.++++.
T Consensus 198 --vslh~------------------Plt~~T~~li~~~~l~~m-k~~a~lIN~aRG~iVde~aL~~aL~~ 246 (334)
T 3kb6_A 198 --ISLHV------------------PYTKETHHMINEERISLM-KDGVYLINTARGKVVDTDALYRAYQR 246 (334)
T ss_dssp --EEECC------------------CCCTTTTTCBCHHHHHHS-CTTEEEEECSCGGGBCHHHHHHHHHT
T ss_pred --EEEcC------------------CCChhhccCcCHHHHhhc-CCCeEEEecCccccccHHHHHHHHHh
Confidence 88887 5543 457788888877 66544433334778999999999874
No 124
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=35.63 E-value=33 Score=30.64 Aligned_cols=32 Identities=9% Similarity=0.026 Sum_probs=24.0
Q ss_pred hhcCCCccceeecCCCchHHHHHHh----CCccccccc
Q 017557 248 ILKHPSVGCFVTHCGSGSLSEAMVN----ECQLVLLPN 281 (369)
Q Consensus 248 lL~~~~~~~~ItHgG~~s~~Eal~~----GvP~i~~P~ 281 (369)
....+++ +|+-||=||+.+++.. ++|+++++.
T Consensus 72 ~~~~~d~--vi~~GGDGT~l~a~~~~~~~~~pvlgi~~ 107 (307)
T 1u0t_A 72 AADGCEL--VLVLGGDGTFLRAAELARNASIPVLGVNL 107 (307)
T ss_dssp ----CCC--EEEEECHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred cccCCCE--EEEEeCCHHHHHHHHHhccCCCCEEEEeC
Confidence 3445677 9999999999999754 899999874
No 125
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=35.48 E-value=61 Score=23.66 Aligned_cols=41 Identities=7% Similarity=0.103 Sum_probs=25.2
Q ss_pred HHHHHHHhhcCCCEEEECC-CC--ChHHHHHHh-----CCCeEEEeCch
Q 017557 9 PAIEAIVRDIKPNIVFFDF-TY--WLPSLARKL-----GIKSIAFVTVS 49 (369)
Q Consensus 9 ~~l~~~l~~~~pD~vI~D~-~~--~~~~~A~~l-----giP~v~~~~~~ 49 (369)
....+.+++.+||+||.|. .+ -+..+.+.+ ++|.+.++...
T Consensus 41 ~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~t~~~ 89 (130)
T 3eod_A 41 VDALELLGGFTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVISATE 89 (130)
T ss_dssp HHHHHHHTTCCCSEEEECCC-----CHHHHHHHHHTTCCCCEEEEECCC
T ss_pred HHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEcCC
Confidence 3445566667899999998 44 234444433 58888877643
No 126
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=35.41 E-value=1.4e+02 Score=26.72 Aligned_cols=63 Identities=14% Similarity=0.159 Sum_probs=40.2
Q ss_pred CceEEEeeCCCccCCHHHHHHHHHHHHhcCCcEEEEECCCCCCCccccCCchhHHHHhcCCCee-EecccChHHhhcCCC
Q 017557 175 KSLIFCALGSECVLKKDQFQELILGFELTGLPFFAALKPPTGHDTIESALPEGFEERVKGRGFV-HGGWVQQQLILKHPS 253 (369)
Q Consensus 175 ~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~-v~~~~pq~~lL~~~~ 253 (369)
+.+-.|.+|.++ ..+++.+...|.+++..-+... ..+ ++. ........++++.++
T Consensus 140 ~tvGIiG~G~IG-------~~vA~~l~~~G~~V~~~dr~~~-------~~~----------~~~~~~~~~~l~ell~~aD 195 (315)
T 3pp8_A 140 FSVGIMGAGVLG-------AKVAESLQAWGFPLRCWSRSRK-------SWP----------GVESYVGREELRAFLNQTR 195 (315)
T ss_dssp CCEEEECCSHHH-------HHHHHHHHTTTCCEEEEESSCC-------CCT----------TCEEEESHHHHHHHHHTCS
T ss_pred CEEEEEeeCHHH-------HHHHHHHHHCCCEEEEEcCCch-------hhh----------hhhhhcccCCHHHHHhhCC
Confidence 458899999998 7788888888888776543321 111 111 112234567888888
Q ss_pred ccceeecCCC
Q 017557 254 VGCFVTHCGS 263 (369)
Q Consensus 254 ~~~~ItHgG~ 263 (369)
+ ++.|+-.
T Consensus 196 i--V~l~~Pl 203 (315)
T 3pp8_A 196 V--LINLLPN 203 (315)
T ss_dssp E--EEECCCC
T ss_pred E--EEEecCC
Confidence 8 8888743
No 127
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=35.26 E-value=61 Score=23.40 Aligned_cols=40 Identities=18% Similarity=0.292 Sum_probs=26.2
Q ss_pred HHHHHHhhcCCCEEEECC-CC--ChHHHHHHh-----CCCeEEEeCch
Q 017557 10 AIEAIVRDIKPNIVFFDF-TY--WLPSLARKL-----GIKSIAFVTVS 49 (369)
Q Consensus 10 ~l~~~l~~~~pD~vI~D~-~~--~~~~~A~~l-----giP~v~~~~~~ 49 (369)
...+.+++.+||+||.|. .+ -+..+++++ ++|.+.++...
T Consensus 38 ~a~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 85 (124)
T 1srr_A 38 QALDIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVIIMTAYG 85 (124)
T ss_dssp HHHHHHHHHCCSEEEEESCCTTCCHHHHHHHHHHHCTTCEEEEEESSC
T ss_pred HHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHhCCCCCEEEEEccC
Confidence 344555566899999998 54 355555543 57888776543
No 128
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=35.02 E-value=48 Score=29.99 Aligned_cols=34 Identities=9% Similarity=0.063 Sum_probs=21.2
Q ss_pred eEEEeeCCCccCCHHHHHHHHHHHHhcCCcEEEEEC
Q 017557 177 LIFCALGSECVLKKDQFQELILGFELTGLPFFAALK 212 (369)
Q Consensus 177 ~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~ 212 (369)
++++++|+.+ ....+..++++|.+.|.++.+.+.
T Consensus 7 il~~~~~~~G--hv~~~~~La~~L~~~GheV~v~~~ 40 (402)
T 3ia7_A 7 ILFANVQGHG--HVYPSLGLVSELARRGHRITYVTT 40 (402)
T ss_dssp EEEECCSSHH--HHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred EEEEeCCCCc--ccccHHHHHHHHHhCCCEEEEEcC
Confidence 6666666543 223455677777777777777664
No 129
>1vi6_A 30S ribosomal protein S2P; structural genomics, ribosome; 1.95A {Archaeoglobus fulgidus} SCOP: c.23.15.1 PDB: 1vi5_A
Probab=35.02 E-value=25 Score=29.71 Aligned_cols=31 Identities=29% Similarity=0.352 Sum_probs=24.7
Q ss_pred CCCEEE-ECC--CCChHHHHHHhCCCeEEEeCch
Q 017557 19 KPNIVF-FDF--TYWLPSLARKLGIKSIAFVTVS 49 (369)
Q Consensus 19 ~pD~vI-~D~--~~~~~~~A~~lgiP~v~~~~~~ 49 (369)
.||+|| .|. ...+..=|.++|||++++.-+.
T Consensus 115 ~PdlliV~Dp~~e~~ai~EA~~l~IPvIalvDTn 148 (208)
T 1vi6_A 115 EPEVVFVNDPAIDKQAVSEATAVGIPVVALCDSN 148 (208)
T ss_dssp CCSEEEESCTTTTHHHHHHHHHTTCCEEEEECTT
T ss_pred CCCEEEEECCCcchhHHHHHHHhCCCEEEEeCCC
Confidence 588774 787 5567888999999999987654
No 130
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=34.90 E-value=15 Score=30.68 Aligned_cols=74 Identities=11% Similarity=0.115 Sum_probs=0.0
Q ss_pred cChHHhhcCCCccceeecCCCchHHHHHHhCCccccccccc-c----------------------hhHHHHHHhhhcceE
Q 017557 243 VQQQLILKHPSVGCFVTHCGSGSLSEAMVNECQLVLLPNVG-D----------------------QIINSRLMGEDLKVG 299 (369)
Q Consensus 243 ~pq~~lL~~~~~~~~ItHgG~~s~~Eal~~GvP~i~~P~~~-D----------------------Q~~na~~v~~~~g~G 299 (369)
++...-+ ...+.++|++||........ .++|+|-+|..+ | ....++.+.+.+|.-
T Consensus 42 v~~a~~~-~~~~dVIISRGgta~~lr~~-~~iPVV~I~~s~~Dil~al~~a~~~~~kIavvg~~~~~~~~~~~~~ll~~~ 119 (196)
T 2q5c_A 42 SKIAFGL-QDEVDAIISRGATSDYIKKS-VSIPSISIKVTRFDTMRAVYNAKRFGNELALIAYKHSIVDKHEIEAMLGVK 119 (196)
T ss_dssp HHHHHHH-TTTCSEEEEEHHHHHHHHTT-CSSCEEEECCCHHHHHHHHHHHGGGCSEEEEEEESSCSSCHHHHHHHHTCE
T ss_pred HHHHHHh-cCCCeEEEECChHHHHHHHh-CCCCEEEEcCCHhHHHHHHHHHHhhCCcEEEEeCcchhhHHHHHHHHhCCc
Q ss_pred EEEeecCCCCccCHHHHHHHHHHH
Q 017557 300 VEVERGDEDGLFTRDGVCKAVKAV 323 (369)
Q Consensus 300 ~~l~~~~~~~~~~~~~l~~ai~~l 323 (369)
+....-+ +.+++...|+++
T Consensus 120 i~~~~~~-----~~~e~~~~i~~l 138 (196)
T 2q5c_A 120 IKEFLFS-----SEDEITTLISKV 138 (196)
T ss_dssp EEEEEEC-----SGGGHHHHHHHH
T ss_pred eEEEEeC-----CHHHHHHHHHHH
No 131
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=34.85 E-value=51 Score=29.89 Aligned_cols=72 Identities=14% Similarity=0.081 Sum_probs=49.8
Q ss_pred CHHHHHHHHHHHHhcCCcEEEEECCCCCCCccccCCchhHHHHhcCCCeeEecccChHHhhcCCCccceeecCCCchHHH
Q 017557 189 KKDQFQELILGFELTGLPFFAALKPPTGHDTIESALPEGFEERVKGRGFVHGGWVQQQLILKHPSVGCFVTHCGSGSLSE 268 (369)
Q Consensus 189 ~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~~~~~ItHgG~~s~~E 268 (369)
+.++.+.+.+++...+.+.||.++.+.. -.++.++++...+-++|+. ||-++..++++-
T Consensus 63 d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g-------------------~~rlL~~lD~~~i~~~PK~--~~GySDiTaL~~ 121 (331)
T 4e5s_A 63 ISSRVQDLHEAFRDPNVKAILTTLGGYN-------------------SNGLLKYLDYDLIRENPKF--FCGYSDITALNN 121 (331)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESCCCSC-------------------GGGGGGGCCHHHHHTSCCE--EEECGGGHHHHH
T ss_pred HHHHHHHHHHHhhCCCCCEEEEcccccc-------------------HHHHHhhcChhHHHhCCeE--EEEecchHHHHH
Confidence 3567888999999889999999876532 1123345555556567776 888877777777
Q ss_pred HHH--hCCccccccc
Q 017557 269 AMV--NECQLVLLPN 281 (369)
Q Consensus 269 al~--~GvP~i~~P~ 281 (369)
+++ .|+..+.=|.
T Consensus 122 al~~~~G~~t~hGp~ 136 (331)
T 4e5s_A 122 AIYTKTGLVTYSGPH 136 (331)
T ss_dssp HHHHHHCBCEEECCC
T ss_pred HHHHhhCCcEEEccc
Confidence 776 4777666555
No 132
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=34.81 E-value=1.2e+02 Score=22.95 Aligned_cols=47 Identities=15% Similarity=0.215 Sum_probs=32.2
Q ss_pred hCCcccccccccchhHHHHHHhhhcceEEEEeecCCCCccCHHHHHHHHHHHhc
Q 017557 272 NECQLVLLPNVGDQIINSRLMGEDLKVGVEVERGDEDGLFTRDGVCKAVKAVMD 325 (369)
Q Consensus 272 ~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~~l~~ai~~ll~ 325 (369)
..+|+|++--..+ ........+. |+--.+.+. ++.+.|..+|+.++.
T Consensus 74 ~~~pii~ls~~~~-~~~~~~~~~~-g~~~~l~kP-----~~~~~L~~~i~~~~~ 120 (155)
T 1qkk_A 74 PDLPMILVTGHGD-IPMAVQAIQD-GAYDFIAKP-----FAADRLVQSARRAEE 120 (155)
T ss_dssp TTSCEEEEECGGG-HHHHHHHHHT-TCCEEEESS-----CCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCC-hHHHHHHHhc-CCCeEEeCC-----CCHHHHHHHHHHHHH
Confidence 4677777644433 3344455556 776666664 799999999999997
No 133
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=34.80 E-value=18 Score=35.16 Aligned_cols=36 Identities=14% Similarity=0.118 Sum_probs=26.8
Q ss_pred HHHHHHHHhhcCCCEEEECCCCChHHHHHHh-------CCCeEEE
Q 017557 8 EPAIEAIVRDIKPNIVFFDFTYWLPSLARKL-------GIKSIAF 45 (369)
Q Consensus 8 ~~~l~~~l~~~~pD~vI~D~~~~~~~~A~~l-------giP~v~~ 45 (369)
..++++.+++.+||++|... ....+|+++ |||++.+
T Consensus 427 ~~~l~~~i~~~~pDLlig~s--~~k~~a~~~~~~~~~~giP~iri 469 (523)
T 3u7q_B 427 LWHLRSLVFTDKPDFMIGNS--YGKFIQRDTLHKGKEFEVPLIRI 469 (523)
T ss_dssp HHHHHHHHHHTCCSEEEECT--THHHHHHHHHHHCGGGCCCEEEC
T ss_pred HHHHHHHHHhcCCCEEEECc--cHHHHHHHhhcccccCCCceEEe
Confidence 45777888888999999987 223456666 9998874
No 134
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=34.30 E-value=92 Score=22.13 Aligned_cols=40 Identities=15% Similarity=0.181 Sum_probs=26.3
Q ss_pred HHHHHHhhcCCCEEEECC-CC--ChHHHHHHh-----CCCeEEEeCch
Q 017557 10 AIEAIVRDIKPNIVFFDF-TY--WLPSLARKL-----GIKSIAFVTVS 49 (369)
Q Consensus 10 ~l~~~l~~~~pD~vI~D~-~~--~~~~~A~~l-----giP~v~~~~~~ 49 (369)
...+.+++.+||++|.|. .+ -+..+.+.+ .+|.+.++...
T Consensus 35 ~a~~~~~~~~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 82 (121)
T 2pl1_A 35 EADYYLNEHIPDIAIVDLGLPDEDGLSLIRRWRSNDVSLPILVLTARE 82 (121)
T ss_dssp HHHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHHTTCCSCEEEEESCC
T ss_pred HHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEecCC
Confidence 444556667899999998 54 345555443 57888876543
No 135
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=34.15 E-value=1e+02 Score=26.00 Aligned_cols=115 Identities=13% Similarity=0.062 Sum_probs=65.0
Q ss_pred HHHHHHHHhcCCcEEEEECCCCCCCccccCCchhHHHHhcCCCeeEecccChHHhhcCCCccceeecCCCchHHHHHHhC
Q 017557 194 QELILGFELTGLPFFAALKPPTGHDTIESALPEGFEERVKGRGFVHGGWVQQQLILKHPSVGCFVTHCGSGSLSEAMVNE 273 (369)
Q Consensus 194 ~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~~~~~ItHgG~~s~~Eal~~G 273 (369)
.++++.++..+..+++..+.. .-+|+.+.+..+.+-+- =||++ .=...|+..+..|+.+|
T Consensus 72 ~~~~~~L~~~~~Dlivlagy~-------~IL~~~~l~~~~~~~iN-----------iHpSL--LP~yrG~~pi~~Ai~~G 131 (215)
T 3kcq_A 72 EHISTVLREHDVDLVCLAGFM-------SILPEKFVTDWHHKIIN-----------IHPSL--LPSFKGLNAQEQAYKAG 131 (215)
T ss_dssp HHHHHHHHHTTCSEEEESSCC-------SCCCHHHHHHTTTSEEE-----------EESSC--TTTTCSSCHHHHHHHHT
T ss_pred HHHHHHHHHhCCCEEEEeCCc-------eEeCHHHHhhccCCeEE-----------ECccc--ccCCCCccHHHHHHHcC
Confidence 456666666677777776542 45666665544322222 24444 34456899999999999
Q ss_pred Cccccccccc--chhHHHHHHhhhcceEEEEeecCCCCccCHHHHHHHHHHHhccCCcchHHHHHHHHHHH
Q 017557 274 CQLVLLPNVG--DQIINSRLMGEDLKVGVEVERGDEDGLFTRDGVCKAVKAVMDDDSEVGKDARQNHAELR 342 (369)
Q Consensus 274 vP~i~~P~~~--DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~a~~l~ 342 (369)
....++-.+. +..+.+.-+.+. -+.+..+ -|.++|.+.+.++- .+-|.+..+.+.
T Consensus 132 ~~~tGvTvh~v~~~lD~G~Ii~Q~---~v~I~~~-----dt~~~L~~rl~~~e------~~ll~~~l~~~~ 188 (215)
T 3kcq_A 132 VKIAGCTLHYVYQELDAGPIIMQA---AVPVLRE-----DTAESLASRILAAE------HVCYPKGVKLIA 188 (215)
T ss_dssp CSEEEEEEEECCSSTTCSCEEEEE---EEECCTT-----CCHHHHHHHHHHHH------HHHHHHHHHHHH
T ss_pred CCeEEEEEEEEcCCCCCCCEEEEE---EeecCCC-----CCHHHHHHHHHHHH------HHHHHHHHHHHH
Confidence 9888777642 222222222211 2223332 58888888776543 345555555543
No 136
>3goc_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: YES; 1.60A {Streptomyces avermitilis}
Probab=33.82 E-value=65 Score=27.68 Aligned_cols=39 Identities=18% Similarity=0.279 Sum_probs=29.3
Q ss_pred HHHHHHHhhc--CCCEEEECC--------CCChHHHHHHhCCCeEEEeC
Q 017557 9 PAIEAIVRDI--KPNIVFFDF--------TYWLPSLARKLGIKSIAFVT 47 (369)
Q Consensus 9 ~~l~~~l~~~--~pD~vI~D~--------~~~~~~~A~~lgiP~v~~~~ 47 (369)
|.+.+++++. +||++++|- +..|+.+.-.+|+|+|...=
T Consensus 95 P~ll~al~~L~~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGVAK 143 (237)
T 3goc_A 95 PTVLAALDALPCPPGLIVCDGYGVAHPRRFGLASHLGVLTGLPTIGVAK 143 (237)
T ss_dssp HHHHHHHHTSSSCCSEEEEESCSSCSTTSCCHHHHHHHHHCSCEEEEES
T ss_pred HHHHHHHHhcCCCCCEEEEeCceeecCCCcchhheeeeecCCCEEeeec
Confidence 5666777765 699999995 23467788888999998753
No 137
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=33.68 E-value=38 Score=32.19 Aligned_cols=36 Identities=11% Similarity=0.150 Sum_probs=29.1
Q ss_pred HHHHHHHHhhcCCCEEEECCCCChHHHHHHhCCCeEEE
Q 017557 8 EPAIEAIVRDIKPNIVFFDFTYWLPSLARKLGIKSIAF 45 (369)
Q Consensus 8 ~~~l~~~l~~~~pD~vI~D~~~~~~~~A~~lgiP~v~~ 45 (369)
..++++++++.+||++|.+. ....+|+++|||++.+
T Consensus 374 ~~~l~~~i~~~~pDl~ig~~--~~~~~a~k~gip~~~~ 409 (458)
T 1mio_B 374 FFDVHQWIKNEGVDLLISNT--YGKFIAREENIPFVRF 409 (458)
T ss_dssp HHHHHHHHHHSCCSEEEESG--GGHHHHHHHTCCEEEC
T ss_pred HHHHHHHHHhcCCCEEEeCc--chHHHHHHcCCCEEEe
Confidence 44577888888999999876 2477899999999975
No 138
>1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A
Probab=33.64 E-value=84 Score=22.50 Aligned_cols=41 Identities=20% Similarity=0.220 Sum_probs=26.9
Q ss_pred HHHHHHHhhcCCCEEEECC-CC--ChHHHHHHh----CCCeEEEeCch
Q 017557 9 PAIEAIVRDIKPNIVFFDF-TY--WLPSLARKL----GIKSIAFVTVS 49 (369)
Q Consensus 9 ~~l~~~l~~~~pD~vI~D~-~~--~~~~~A~~l----giP~v~~~~~~ 49 (369)
....+.+++.+||+||.|. .+ -+..+++.+ ++|.+.++...
T Consensus 37 ~~a~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~ 84 (123)
T 1xhf_A 37 AEMHQILSEYDINLVIMDINLPGKNGLLLARELREQANVALMFLTGRD 84 (123)
T ss_dssp HHHHHHHHHSCCSEEEECSSCSSSCHHHHHHHHHHHCCCEEEEEESCC
T ss_pred HHHHHHHhcCCCCEEEEcCCCCCCCHHHHHHHHHhCCCCcEEEEECCC
Confidence 3444556667899999998 54 355555544 67877776543
No 139
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=33.57 E-value=67 Score=23.06 Aligned_cols=39 Identities=21% Similarity=0.294 Sum_probs=24.2
Q ss_pred HHHHHHhhcCCCEEEECC-CC--ChHHHHHHh-------CCCeEEEeCc
Q 017557 10 AIEAIVRDIKPNIVFFDF-TY--WLPSLARKL-------GIKSIAFVTV 48 (369)
Q Consensus 10 ~l~~~l~~~~pD~vI~D~-~~--~~~~~A~~l-------giP~v~~~~~ 48 (369)
...+.+++.+||+||.|. .+ -+..+++++ .+|.+.++..
T Consensus 36 ~a~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 84 (124)
T 1mb3_A 36 SALSIARENKPDLILMDIQLPEISGLEVTKWLKEDDDLAHIPVVAVTAF 84 (124)
T ss_dssp HHHHHHHHHCCSEEEEESBCSSSBHHHHHHHHHHSTTTTTSCEEEEC--
T ss_pred HHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHcCccccCCcEEEEECC
Confidence 344455566899999998 54 355555543 5777776543
No 140
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=33.56 E-value=32 Score=33.05 Aligned_cols=36 Identities=11% Similarity=-0.019 Sum_probs=29.1
Q ss_pred HHHHHHHHhhcCCCEEEECCCCChHHHHHHhCCCeEEE
Q 017557 8 EPAIEAIVRDIKPNIVFFDFTYWLPSLARKLGIKSIAF 45 (369)
Q Consensus 8 ~~~l~~~l~~~~pD~vI~D~~~~~~~~A~~lgiP~v~~ 45 (369)
..++++.+++.+||++|... ....+|+++|||++-+
T Consensus 390 ~~el~~~i~~~~pDL~ig~~--~~~~~a~k~gIP~~~~ 425 (483)
T 3pdi_A 390 ARVLLKTVDEYQADILIAGG--RNMYTALKGRVPFLDI 425 (483)
T ss_dssp HHHHHHHHHHTTCSEEECCG--GGHHHHHHTTCCBCCC
T ss_pred HHHHHHHHHhcCCCEEEECC--chhHHHHHcCCCEEEe
Confidence 56788888889999999865 3557899999999743
No 141
>2oxj_A Hybrid alpha/beta peptide based on the GCN4-P1 Se heptad positions B and F substituted...; helix bundle, foldamer, unknown function; HET: B3K B3D B3E B3S B3Y B3X B3A BAL; 2.00A {Synthetic} PDB: 2oxk_A*
Probab=33.55 E-value=69 Score=18.29 Aligned_cols=28 Identities=7% Similarity=0.154 Sum_probs=23.4
Q ss_pred HHHHHHHHHhccCCcchHHHHHHHHHHHHHHh
Q 017557 315 GVCKAVKAVMDDDSEVGKDARQNHAELREFLI 346 (369)
Q Consensus 315 ~l~~ai~~ll~~~~~~~~~~~~~a~~l~~~~~ 346 (369)
++.+.++++|.. +..+...+.+|++.+.
T Consensus 5 QLE~kVEeLl~~----n~~Le~eV~rLk~ll~ 32 (34)
T 2oxj_A 5 QLEXKVXELLXK----NXHLEXEVXRLKXLVX 32 (34)
T ss_dssp HHHHHHHHHHHH----HHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHh----hhhHHHHHHHHHHHHh
Confidence 678889999973 7889999999998875
No 142
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=33.45 E-value=64 Score=24.51 Aligned_cols=41 Identities=10% Similarity=0.045 Sum_probs=27.1
Q ss_pred HHHHHHHhhcCCCEEEECC-CC--ChHHHHHHh-----CCCeEEEeCch
Q 017557 9 PAIEAIVRDIKPNIVFFDF-TY--WLPSLARKL-----GIKSIAFVTVS 49 (369)
Q Consensus 9 ~~l~~~l~~~~pD~vI~D~-~~--~~~~~A~~l-----giP~v~~~~~~ 49 (369)
....+.+++.+||+||.|. .+ -+..+.+++ ++|.+.++...
T Consensus 48 ~~a~~~l~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 96 (153)
T 3hv2_A 48 TQALQLLASREVDLVISAAHLPQMDGPTLLARIHQQYPSTTRILLTGDP 96 (153)
T ss_dssp HHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEECCCC
T ss_pred HHHHHHHHcCCCCEEEEeCCCCcCcHHHHHHHHHhHCCCCeEEEEECCC
Confidence 3455566777899999998 44 345555443 68888776543
No 143
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=33.34 E-value=84 Score=26.35 Aligned_cols=114 Identities=13% Similarity=0.087 Sum_probs=66.0
Q ss_pred HHHHHHHHhcCCcEEEEECCCCCCCccccCCchhHHHHhcCCCeeEecccChHHhhcCCCccceeecCCCchHHHHHHhC
Q 017557 194 QELILGFELTGLPFFAALKPPTGHDTIESALPEGFEERVKGRGFVHGGWVQQQLILKHPSVGCFVTHCGSGSLSEAMVNE 273 (369)
Q Consensus 194 ~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~~~~~ItHgG~~s~~Eal~~G 273 (369)
.++++.|+..+..+++..+.. .-+|+.+.+..+.+-+- =|+++ .=...|+..+..|+.+|
T Consensus 76 ~~~~~~l~~~~~Dliv~agy~-------~il~~~~l~~~~~~~iN-----------iHpSL--LP~yrG~~pi~~Ai~~G 135 (209)
T 4ds3_A 76 DAILAALDVLKPDIICLAGYM-------RLLSGRFIAPYEGRILN-----------IHPSL--LPLFPGLHTHQRALDAG 135 (209)
T ss_dssp HHHHHHHHHHCCSEEEESSCC-------SCCCHHHHGGGTTCEEE-----------EESSC--TTSSCSSCHHHHHHHTT
T ss_pred HHHHHHHHhcCCCEEEEeccc-------cCcCHHHHhhccCCeEE-----------ECCcc--ccCCCChhHHHHHHHcC
Confidence 457777777788888887653 45677666544322122 24554 44556899999999999
Q ss_pred Cccccccccc--chhHHHHHHhhhcceEEEEeecCCCCccCHHHHHHHHHHHhccCCcchHHHHHHHHHH
Q 017557 274 CQLVLLPNVG--DQIINSRLMGEDLKVGVEVERGDEDGLFTRDGVCKAVKAVMDDDSEVGKDARQNHAEL 341 (369)
Q Consensus 274 vP~i~~P~~~--DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~a~~l 341 (369)
....++-.+. +..+.+.-+.+. -+.+... -|.++|.+.+.++- -+-|.+..+.+
T Consensus 136 ~~~tGvTvh~v~~~~D~G~Ii~Q~---~v~I~~~-----dt~~~L~~r~~~~~------~~ll~~~l~~~ 191 (209)
T 4ds3_A 136 MKLAGCTVHLVTEGMDEGPILAQA---AVPVLDG-----DTAETLAARVLKAE------HRLYPLALQKF 191 (209)
T ss_dssp CSEEEEEEEECCC--CCCCEEEEE---EEECCTT-----CCHHHHHHHHHHHH------HHHHHHHHHHH
T ss_pred CCeEEEEEEEEcCCCCCCCeEEEE---EEecCCC-----CCHHHHHHHHHHHH------HHHHHHHHHHH
Confidence 9988777642 222222211111 1222222 57888887776543 24455555544
No 144
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=33.32 E-value=1e+02 Score=25.95 Aligned_cols=115 Identities=12% Similarity=0.023 Sum_probs=65.0
Q ss_pred HHHHHHHHhcCCcEEEEECCCCCCCccccCCchhHHHHhcCCCeeEecccChHHhhcCCCccceeecCCCchHHHHHHhC
Q 017557 194 QELILGFELTGLPFFAALKPPTGHDTIESALPEGFEERVKGRGFVHGGWVQQQLILKHPSVGCFVTHCGSGSLSEAMVNE 273 (369)
Q Consensus 194 ~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~~~~~ItHgG~~s~~Eal~~G 273 (369)
.++++.++..+..+++..+.. .-+|+.+.+..+.+-+-+ |+++ .=...|+..+..|+.+|
T Consensus 73 ~~~~~~l~~~~~Dliv~agy~-------~il~~~~l~~~~~~~iNi-----------HpSL--LP~yrG~~pi~~Ai~~G 132 (215)
T 3tqr_A 73 STLQKTIDHYDPKLIVLAGFM-------RKLGKAFVSHYSGRMINI-----------HPSL--LPKYTGLNTHERALAAG 132 (215)
T ss_dssp HHHHHHHHTTCCSEEEESSCC-------SCCCHHHHHHTTTSEEEE-----------ESSS--TTTTCSSCHHHHHHHTT
T ss_pred HHHHHHHHhcCCCEEEEccch-------hhCCHHHHhhccCCeEEe-----------Cccc--CCCCCChhHHHHHHHcC
Confidence 457777777777777776643 456666655443222222 3333 33446889999999999
Q ss_pred Cccccccccc--chhHHHHHHhhhcceEEEEeecCCCCccCHHHHHHHHHHHhccCCcchHHHHHHHHHHH
Q 017557 274 CQLVLLPNVG--DQIINSRLMGEDLKVGVEVERGDEDGLFTRDGVCKAVKAVMDDDSEVGKDARQNHAELR 342 (369)
Q Consensus 274 vP~i~~P~~~--DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~a~~l~ 342 (369)
....++-.+. +..+.+.-+.+. -+.+... -|.++|.+.+.++- .+-|.+..+.+.
T Consensus 133 ~~~tGvTvh~v~~~~D~G~Ii~Q~---~v~I~~~-----dt~~~L~~rl~~~~------~~ll~~~l~~~~ 189 (215)
T 3tqr_A 133 ETEHGVSVHYVTEDLDAGPLICQA---RLSITPQ-----DTPETLKTRVHALE------HIIYPEVLSWFA 189 (215)
T ss_dssp CSEEEEEEEECC-CTTCSCEEEEE---EEECCTT-----CCHHHHHHHHHHHH------HHHHHHHHHHHH
T ss_pred CCeEEEEEEEEcCCCCCCCEEEEE---EEecCCC-----CCHHHHHHHHHHHH------HHHHHHHHHHHH
Confidence 9988776642 222222222111 2222332 48888888776553 345555555443
No 145
>2hy6_A General control protein GCN4; protein design, parallel heptamer, protein structure, biosyn protein; 1.25A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2nrn_A 3crp_A 2b1f_A 3crp_B 2ipz_A 3ck4_A 3ck4_B 2b22_A 1ce9_A
Probab=33.29 E-value=70 Score=18.27 Aligned_cols=30 Identities=13% Similarity=0.097 Sum_probs=23.5
Q ss_pred HHHHHHHHHHhccCCcchHHHHHHHHHHHHHHhc
Q 017557 314 DGVCKAVKAVMDDDSEVGKDARQNHAELREFLIS 347 (369)
Q Consensus 314 ~~l~~ai~~ll~~~~~~~~~~~~~a~~l~~~~~~ 347 (369)
.+|.+++++++.. +..+...+.+|++.+.+
T Consensus 4 nQLEdkVEeLl~~----~~~Le~eV~RL~~ll~~ 33 (34)
T 2hy6_A 4 KQLADAVEELASA----NYHLANAVARLAKAVGE 33 (34)
T ss_dssp HHHHHHHHHHHHH----HHHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHh----hHHHHHHHHHHHHHhcc
Confidence 3678899999973 67788888888887753
No 146
>1qb7_A APRT, adenine phosphoribosyltransferase; dinucleotide binding fold; HET: ADE CIT; 1.50A {Leishmania donovani} SCOP: c.61.1.1 PDB: 1qb8_A* 1qcc_A* 1qcd_A 1mzv_A*
Probab=33.25 E-value=69 Score=27.32 Aligned_cols=40 Identities=20% Similarity=0.281 Sum_probs=28.8
Q ss_pred hhcHHHHHHHHhhc--CCCEEE-ECC--CCChHHHHHHhCCCeEE
Q 017557 5 DLTEPAIEAIVRDI--KPNIVF-FDF--TYWLPSLARKLGIKSIA 44 (369)
Q Consensus 5 ~~~~~~l~~~l~~~--~pD~vI-~D~--~~~~~~~A~~lgiP~v~ 44 (369)
..+...+.+.+++. ++|+|+ .+. ...+..+|+.+|+|++.
T Consensus 55 ~~~~~~la~~i~~~~~~~d~Ivgv~~gG~~~a~~lA~~L~~p~~~ 99 (236)
T 1qb7_A 55 KAIRDFLVQRYRAMSPAPTHILGFDARGFLFGPMIAVELEIPFVL 99 (236)
T ss_dssp HHHHHHHHHHHHHCSSCCSEEEEETTGGGGTHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHHHhhCCCCCEEEEECcCcHHHHHHHHHHhCCCEEE
Confidence 33445555555555 789887 444 77899999999999865
No 147
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=32.97 E-value=1.8e+02 Score=23.54 Aligned_cols=113 Identities=12% Similarity=0.187 Sum_probs=62.1
Q ss_pred ceEEEeeCCCccCCHHHHHHHHHHHHhcCCcEEEEECCCCCCCccccCC-chhHHHHhcCCCeeE---ecccChHHhhcC
Q 017557 176 SLIFCALGSECVLKKDQFQELILGFELTGLPFFAALKPPTGHDTIESAL-PEGFEERVKGRGFVH---GGWVQQQLILKH 251 (369)
Q Consensus 176 ~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~l-p~~~~~~~~~~~~~v---~~~~pq~~lL~~ 251 (369)
.+++.--||.+.. ...++++.|.+.+..+-++..... ..-+ |..+.. ..+ .++. ..|+++.++-..
T Consensus 7 ~IllgvTGs~aa~---k~~~ll~~L~~~g~~V~vv~T~~A-----~~fi~~~~l~~-l~~-~v~~~~~~~~~~hi~l~~~ 76 (175)
T 3qjg_A 7 NVLICLCGSVNSI---NISHYIIELKSKFDEVNVIASTNG-----RKFINGEILKQ-FCD-NYYDEFEDPFLNHVDIANK 76 (175)
T ss_dssp EEEEEECSSGGGG---GHHHHHHHHTTTCSEEEEEECTGG-----GGGSCHHHHHH-HCS-CEECTTTCTTCCHHHHHHT
T ss_pred EEEEEEeCHHHHH---HHHHHHHHHHHCCCEEEEEECcCH-----HHHhhHHHHHH-hcC-CEEecCCCCccccccccch
Confidence 3555555666543 244566777667777766665431 1222 222322 222 2322 134666666555
Q ss_pred CCccceeecCCCchHHH-------------HHHhCCccccccccc----c---hhHHHHHHhhhcceEE
Q 017557 252 PSVGCFVTHCGSGSLSE-------------AMVNECQLVLLPNVG----D---QIINSRLMGEDLKVGV 300 (369)
Q Consensus 252 ~~~~~~ItHgG~~s~~E-------------al~~GvP~i~~P~~~----D---Q~~na~~v~~~~g~G~ 300 (369)
+++ .+|.=|-+||+.. ++..++|++..|-.. . ...|...+.+. |+=+
T Consensus 77 aD~-~vVaPaTanTlakiA~GiaDnLlt~~~la~~~pvvl~Pamn~~m~~~p~~~~Nl~~L~~~-G~~i 143 (175)
T 3qjg_A 77 HDK-IIILPATSNTINKIANGICDNLLLTICHTAFEKLSIFPNMNLRMWENPVTQNNIRLLKDY-GVSI 143 (175)
T ss_dssp CSE-EEEEEECHHHHHHHHTTCCCSHHHHHHHTCGGGEEEEECEEHHHHTCHHHHHHHHHHHHT-TCEE
T ss_pred hCE-EEEeeCCHHHHHHHHccccCCHHHHHHHHcCCCEEEEecCChhhhcCHHHHHHHHHHHHC-CCEE
Confidence 654 3555565555442 356789999999432 2 24577788876 8654
No 148
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=32.68 E-value=91 Score=23.52 Aligned_cols=41 Identities=17% Similarity=0.229 Sum_probs=27.4
Q ss_pred HHHHHHHhhcCCCEEEECC-CC--ChHHHHHHh-----CCCeEEEeCch
Q 017557 9 PAIEAIVRDIKPNIVFFDF-TY--WLPSLARKL-----GIKSIAFVTVS 49 (369)
Q Consensus 9 ~~l~~~l~~~~pD~vI~D~-~~--~~~~~A~~l-----giP~v~~~~~~ 49 (369)
....+.+++.+||+||.|. .+ -+..+++.+ ++|.+.++...
T Consensus 41 ~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 89 (153)
T 3cz5_A 41 GEAYRLYRETTPDIVVMDLTLPGPGGIEATRHIRQWDGAARILIFTMHQ 89 (153)
T ss_dssp HHHHHHHHTTCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESCC
T ss_pred HHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHHhCCCCeEEEEECCC
Confidence 4455666777899999998 44 344444443 68888877543
No 149
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=32.42 E-value=1.3e+02 Score=27.04 Aligned_cols=64 Identities=11% Similarity=0.064 Sum_probs=40.6
Q ss_pred CceEEEeeCCCccCCHHHHHHHHHHHHhcCCcEEEEECCCCCCCccccCCchhHHHHhcCCCeeEecccChHHhhcCCCc
Q 017557 175 KSLIFCALGSECVLKKDQFQELILGFELTGLPFFAALKPPTGHDTIESALPEGFEERVKGRGFVHGGWVQQQLILKHPSV 254 (369)
Q Consensus 175 ~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~~ 254 (369)
+.+-.|.+|.++ ..+++.+...|.+++..-+.... ...+. . ...+....++++.+++
T Consensus 138 ktvGIiGlG~IG-------~~vA~~l~~~G~~V~~~dr~~~~----~~~~~----------~--~~~~~~l~ell~~aDv 194 (324)
T 3evt_A 138 QQLLIYGTGQIG-------QSLAAKASALGMHVIGVNTTGHP----ADHFH----------E--TVAFTATADALATANF 194 (324)
T ss_dssp CEEEEECCSHHH-------HHHHHHHHHTTCEEEEEESSCCC----CTTCS----------E--EEEGGGCHHHHHHCSE
T ss_pred CeEEEECcCHHH-------HHHHHHHHhCCCEEEEECCCcch----hHhHh----------h--ccccCCHHHHHhhCCE
Confidence 458899999998 67777787788887665433210 00111 1 1233455678888888
Q ss_pred cceeecCCC
Q 017557 255 GCFVTHCGS 263 (369)
Q Consensus 255 ~~~ItHgG~ 263 (369)
++.|.-.
T Consensus 195 --V~l~lPl 201 (324)
T 3evt_A 195 --IVNALPL 201 (324)
T ss_dssp --EEECCCC
T ss_pred --EEEcCCC
Confidence 8888743
No 150
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=32.29 E-value=84 Score=21.95 Aligned_cols=40 Identities=8% Similarity=0.055 Sum_probs=25.2
Q ss_pred HHHHHHHhhcCCCEEEECC-CC--ChHHHHHH-------hCCCeEEEeCc
Q 017557 9 PAIEAIVRDIKPNIVFFDF-TY--WLPSLARK-------LGIKSIAFVTV 48 (369)
Q Consensus 9 ~~l~~~l~~~~pD~vI~D~-~~--~~~~~A~~-------lgiP~v~~~~~ 48 (369)
....+.+++.+||++|.|. .+ -+..+.+. -++|.+.++..
T Consensus 35 ~~~~~~l~~~~~dlii~d~~~~~~~~~~~~~~l~~~~~~~~~~ii~~~~~ 84 (119)
T 2j48_A 35 STALDQLDLLQPIVILMAWPPPDQSCLLLLQHLREHQADPHPPLVLFLGE 84 (119)
T ss_dssp HHHHHHHHHHCCSEEEEECSTTCCTHHHHHHHHHHTCCCSSCCCEEEESS
T ss_pred HHHHHHHHhcCCCEEEEecCCCCCCHHHHHHHHHhccccCCCCEEEEeCC
Confidence 3445556666899999997 43 34444433 35788877654
No 151
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=32.26 E-value=2.3e+02 Score=24.56 Aligned_cols=52 Identities=15% Similarity=0.107 Sum_probs=32.0
Q ss_pred hCCcccccccccchh-----HHHHHHhhhcce-EEEEeec--------CCCCccCHHHHHHHHHHHh
Q 017557 272 NECQLVLLPNVGDQI-----INSRLMGEDLKV-GVEVERG--------DEDGLFTRDGVCKAVKAVM 324 (369)
Q Consensus 272 ~GvP~i~~P~~~DQ~-----~na~~v~~~~g~-G~~l~~~--------~~~~~~~~~~l~~ai~~ll 324 (369)
+|+|+++.|-+.--. .-+...... |+ |+.+... |..-.++++++.+.++++-
T Consensus 191 ~~~pVi~d~sH~~g~~~~v~~~~~aAva~-Ga~Gl~iE~H~~~d~al~D~~~sl~p~~~~~l~~~i~ 256 (262)
T 1zco_A 191 SHLPIIVDPSHPAGRRSLVIPLAKAAYAI-GADGIMVEVHPEPEKALSDSQQQLTFDDFLQLLKELE 256 (262)
T ss_dssp BSSCEEECSSTTTCSGGGHHHHHHHHHHT-TCSEEEEEBCSSGGGCSSCTTTCBCHHHHHHHHHHHH
T ss_pred hCCCEEEEcCCCCCccchHHHHHHHHHHc-CCCEEEEEecCCccccCChhhcCCCHHHHHHHHHHHH
Confidence 489988988774222 224444445 65 6777755 2234577888877776654
No 152
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=32.20 E-value=70 Score=23.75 Aligned_cols=40 Identities=10% Similarity=0.088 Sum_probs=26.9
Q ss_pred HHHHHHhhcCCCEEEECC-CC--ChHHHHHHh----CCCeEEEeCch
Q 017557 10 AIEAIVRDIKPNIVFFDF-TY--WLPSLARKL----GIKSIAFVTVS 49 (369)
Q Consensus 10 ~l~~~l~~~~pD~vI~D~-~~--~~~~~A~~l----giP~v~~~~~~ 49 (369)
...+.++..+||+||.|. .+ -+..+++.+ .+|.+.++...
T Consensus 39 ~al~~~~~~~~dlvllD~~l~~~~g~~l~~~l~~~~~~~ii~ls~~~ 85 (136)
T 2qzj_A 39 EAIGKIFSNKYDLIFLEIILSDGDGWTLCKKIRNVTTCPIVYMTYIN 85 (136)
T ss_dssp HHHHHHHHCCCSEEEEESEETTEEHHHHHHHHHTTCCCCEEEEESCC
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHccCCCCCEEEEEcCC
Confidence 444556667899999998 54 355555554 57888776543
No 153
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=31.69 E-value=35 Score=31.00 Aligned_cols=28 Identities=21% Similarity=0.252 Sum_probs=20.0
Q ss_pred CCCccceeec-CCCchHHHHHHhCCcccccc
Q 017557 251 HPSVGCFVTH-CGSGSLSEAMVNECQLVLLP 280 (369)
Q Consensus 251 ~~~~~~~ItH-gG~~s~~Eal~~GvP~i~~P 280 (369)
.|++ +|+| .+..+..-+-..|+|.+.+-
T Consensus 114 ~PD~--Vv~~~~~~~~~~aa~~~giP~v~~~ 142 (391)
T 3tsa_A 114 RPSV--LLVDVCALIGRVLGGLLDLPVVLHR 142 (391)
T ss_dssp CCSE--EEEETTCHHHHHHHHHTTCCEEEEC
T ss_pred CCCE--EEeCcchhHHHHHHHHhCCCEEEEe
Confidence 5777 7777 44555666778999988874
No 154
>3m48_A General control protein GCN4; leucine zipper, synthetic peptide, alpha helix, activa amino-acid biosynthesis, DNA-binding, nucleus; 1.45A {Synthetic} PDB: 3i1g_A 2ahp_A* 2o7h_A
Probab=31.48 E-value=69 Score=18.21 Aligned_cols=29 Identities=10% Similarity=0.178 Sum_probs=23.4
Q ss_pred HHHHHHHHHhccCCcchHHHHHHHHHHHHHHhc
Q 017557 315 GVCKAVKAVMDDDSEVGKDARQNHAELREFLIS 347 (369)
Q Consensus 315 ~l~~ai~~ll~~~~~~~~~~~~~a~~l~~~~~~ 347 (369)
++.+.+++++.. +..+...+.+|++.+.+
T Consensus 4 QLE~kVEeLl~~----n~~Le~EV~RLk~Ll~~ 32 (33)
T 3m48_A 4 QLEAKVEELLSK----NWNLENEVARLKKLVGE 32 (33)
T ss_dssp HHHHHHHHHHHH----HHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHH----hHHHHHHHHHHHHHhhc
Confidence 577888999963 78899999999888753
No 155
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=31.46 E-value=81 Score=23.42 Aligned_cols=40 Identities=10% Similarity=0.073 Sum_probs=26.3
Q ss_pred HHHHHHHhhcCCCEEEECC-CC--ChHHHHHHh-----CCCeEEEeCc
Q 017557 9 PAIEAIVRDIKPNIVFFDF-TY--WLPSLARKL-----GIKSIAFVTV 48 (369)
Q Consensus 9 ~~l~~~l~~~~pD~vI~D~-~~--~~~~~A~~l-----giP~v~~~~~ 48 (369)
....+.+++.+||+||.|. .+ -+..+++.+ .+|.+.++..
T Consensus 38 ~~a~~~l~~~~~dlvllD~~l~~~~g~~l~~~l~~~~~~~~ii~ls~~ 85 (137)
T 3cfy_A 38 RDAIQFIERSKPQLIILDLKLPDMSGEDVLDWINQNDIPTSVIIATAH 85 (137)
T ss_dssp HHHHHHHHHHCCSEEEECSBCSSSBHHHHHHHHHHTTCCCEEEEEESS
T ss_pred HHHHHHHHhcCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEec
Confidence 3444556667899999998 54 355555544 4677776654
No 156
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=31.31 E-value=31 Score=30.09 Aligned_cols=33 Identities=30% Similarity=0.289 Sum_probs=26.0
Q ss_pred CCCEEE-ECC--CCChHHHHHHhCCCeEEEeCchHH
Q 017557 19 KPNIVF-FDF--TYWLPSLARKLGIKSIAFVTVSPA 51 (369)
Q Consensus 19 ~pD~vI-~D~--~~~~~~~A~~lgiP~v~~~~~~~~ 51 (369)
.||+|| +|. ...+..=|.++|||+|++.-+.+.
T Consensus 158 ~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivDTn~d 193 (256)
T 2vqe_B 158 LPDAIFVVDPTKEAIAVREARKLFIPVIALADTDSD 193 (256)
T ss_dssp CCSEEEESCTTTTHHHHHHHHHTTCCCEECCCTTSC
T ss_pred CCCEEEEeCCccchHHHHHHHHcCCCEEEEecCCCC
Confidence 599775 787 556888899999999998765433
No 157
>3bch_A 40S ribosomal protein SA; laminin receptor, P40 ribosomal protein, acetylation, cytoplasm, phosphorylation, polymorphism; 2.15A {Homo sapiens}
Probab=31.30 E-value=30 Score=30.10 Aligned_cols=32 Identities=16% Similarity=0.184 Sum_probs=25.2
Q ss_pred CCCEEE-ECC--CCChHHHHHHhCCCeEEEeCchH
Q 017557 19 KPNIVF-FDF--TYWLPSLARKLGIKSIAFVTVSP 50 (369)
Q Consensus 19 ~pD~vI-~D~--~~~~~~~A~~lgiP~v~~~~~~~ 50 (369)
.||+|| +|. ...+..=|.++|||+|++.-+.+
T Consensus 151 ~PdlliV~Dp~~e~~AI~EA~~lgIPvIalvDTn~ 185 (253)
T 3bch_A 151 EPRLLVVTDPRADHQPLTEASYVNLPTIALCNTDS 185 (253)
T ss_dssp SCSEEEESCTTTTHHHHHHHHHTTCCEEEEECTTC
T ss_pred CCCEEEEECCCccchHHHHHHHhCCCEEEEEcCCC
Confidence 488775 788 55678889999999999876543
No 158
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=31.22 E-value=73 Score=23.82 Aligned_cols=39 Identities=15% Similarity=0.057 Sum_probs=25.1
Q ss_pred HHHHHHhhcCCCEEEECC-CC--ChHHHHHHh-----CCCeEEEeCc
Q 017557 10 AIEAIVRDIKPNIVFFDF-TY--WLPSLARKL-----GIKSIAFVTV 48 (369)
Q Consensus 10 ~l~~~l~~~~pD~vI~D~-~~--~~~~~A~~l-----giP~v~~~~~ 48 (369)
...+.+++.+||+||.|. .+ -+..+++++ ++|.+.++..
T Consensus 40 ~al~~~~~~~~dlvllD~~lp~~~g~~l~~~l~~~~~~~~ii~ls~~ 86 (141)
T 3cu5_A 40 NAIQIALKHPPNVLLTDVRMPRMDGIELVDNILKLYPDCSVIFMSGY 86 (141)
T ss_dssp HHHHHHTTSCCSEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEECCS
T ss_pred HHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCcEEEEeCC
Confidence 444555666899999998 54 455555544 4677766543
No 159
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=31.07 E-value=1.2e+02 Score=25.36 Aligned_cols=114 Identities=17% Similarity=0.065 Sum_probs=65.9
Q ss_pred HHHHHHHHhcCCcEEEEECCCCCCCccccCCchhHHHHhcCCCeeEecccChHHhhcCCCccceeecCCCchHHHHHHhC
Q 017557 194 QELILGFELTGLPFFAALKPPTGHDTIESALPEGFEERVKGRGFVHGGWVQQQLILKHPSVGCFVTHCGSGSLSEAMVNE 273 (369)
Q Consensus 194 ~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~~~~~ItHgG~~s~~Eal~~G 273 (369)
.++++.++..+..+++..+.. .-+|+.+.+..+.+-+-+ |+++ .=...|++.+..|+.+|
T Consensus 69 ~~~~~~l~~~~~Dliv~agy~-------~il~~~~l~~~~~~~iNi-----------HpSl--LP~yrG~~pi~~ai~~G 128 (212)
T 1jkx_A 69 RELIHEIDMYAPDVVVLAGFM-------RILSPAFVSHYAGRLLNI-----------HPSL--LPKYPGLHTHRQALENG 128 (212)
T ss_dssp HHHHHHHGGGCCSEEEESSCC-------SCCCHHHHHHTTTSEEEE-----------ESSC--TTSCCSSCHHHHHHHTT
T ss_pred HHHHHHHHhcCCCEEEEeChh-------hhCCHHHHhhccCCEEEE-----------ccCc--ccCCCCccHHHHHHHcC
Confidence 346777777777778777643 456766665443222222 3333 33346889999999999
Q ss_pred Cccccccccc--chhHHHHHHhhhcceEEEEeecCCCCccCHHHHHHHHHHHhccCCcchHHHHHHHHHH
Q 017557 274 CQLVLLPNVG--DQIINSRLMGEDLKVGVEVERGDEDGLFTRDGVCKAVKAVMDDDSEVGKDARQNHAEL 341 (369)
Q Consensus 274 vP~i~~P~~~--DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~a~~l 341 (369)
....++-.+. +..+.+.-+.+. -+.+..+ -|.++|.+.+.++- .+-|.+..+.+
T Consensus 129 ~~~tGvTvh~v~~~~D~G~Ii~Q~---~v~I~~~-----dt~~~L~~rl~~~~------~~ll~~~l~~~ 184 (212)
T 1jkx_A 129 DEEHGTSVHFVTDELDGGPVILQA---KVPVFAG-----DSEDDITARVQTQE------HAIYPLVISWF 184 (212)
T ss_dssp CSEEEEEEEECCSSTTCSCEEEEE---EEECCTT-----CCHHHHHHHHHHHH------HHHHHHHHHHH
T ss_pred CCceEEEEEEEcccccCCCEEEEE---EEEcCCC-----CCHHHHHHHHHHHH------HHHHHHHHHHH
Confidence 9988777642 333332222221 1223332 58888888776543 35555555554
No 160
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=31.03 E-value=72 Score=24.10 Aligned_cols=41 Identities=10% Similarity=0.183 Sum_probs=26.7
Q ss_pred HHHHHHHhhcCCCEEEECC-CC--ChHHHHHHh-----CCCeEEEeCch
Q 017557 9 PAIEAIVRDIKPNIVFFDF-TY--WLPSLARKL-----GIKSIAFVTVS 49 (369)
Q Consensus 9 ~~l~~~l~~~~pD~vI~D~-~~--~~~~~A~~l-----giP~v~~~~~~ 49 (369)
....+.+++.+||+||.|. .+ -+..+.+.+ ++|.+.++...
T Consensus 51 ~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 99 (152)
T 3eul_A 51 AAALELIKAHLPDVALLDYRMPGMDGAQVAAAVRSYELPTRVLLISAHD 99 (152)
T ss_dssp HHHHHHHHHHCCSEEEEETTCSSSCHHHHHHHHHHTTCSCEEEEEESCC
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCeEEEEEccC
Confidence 4455666677899999997 43 345555443 57777776543
No 161
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=30.97 E-value=19 Score=31.04 Aligned_cols=31 Identities=29% Similarity=0.433 Sum_probs=24.5
Q ss_pred CCCEEE-ECC--CCChHHHHHHhCCCeEEEeCch
Q 017557 19 KPNIVF-FDF--TYWLPSLARKLGIKSIAFVTVS 49 (369)
Q Consensus 19 ~pD~vI-~D~--~~~~~~~A~~lgiP~v~~~~~~ 49 (369)
.||+|| .|. ...+..=|.++|||+|++.-+.
T Consensus 157 ~Pdll~v~Dp~~e~~ai~EA~~l~IPvIaivDTn 190 (231)
T 3bbn_B 157 LPDIVIIVDQQEEYTALRECITLGIPTICLIDTN 190 (231)
T ss_dssp CCSEEEESCTTTTHHHHHHHHTTTCCEEECCCSS
T ss_pred CCCEEEEeCCccccHHHHHHHHhCCCEEEEecCC
Confidence 499875 787 5567788999999999987554
No 162
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=30.94 E-value=1.2e+02 Score=25.73 Aligned_cols=114 Identities=11% Similarity=0.031 Sum_probs=66.2
Q ss_pred HHHHHHHHhcCCcEEEEECCCCCCCccccCCchhHHHHhcCCCeeEecccChHHhhcCCCccceeecCCCchHHHHHHhC
Q 017557 194 QELILGFELTGLPFFAALKPPTGHDTIESALPEGFEERVKGRGFVHGGWVQQQLILKHPSVGCFVTHCGSGSLSEAMVNE 273 (369)
Q Consensus 194 ~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~~~~~ItHgG~~s~~Eal~~G 273 (369)
.++++.|+..+..+++..+.. .-+|+.+.+..+.+-+-+ ||++ .=...|+..+..|+.+|
T Consensus 91 ~~~~~~l~~~~~Dliv~agy~-------~IL~~~~l~~~~~~~iNi-----------HpSL--LP~yrG~~pi~~Ai~~G 150 (229)
T 3auf_A 91 AALAERLQAYGVDLVCLAGYM-------RLVRGPMLTAFPNRILNI-----------HPSL--LPAFPGLEAQRQALEHG 150 (229)
T ss_dssp HHHHHHHHHTTCSEEEESSCC-------SCCCHHHHHHSTTCEEEE-----------ESSC--TTSSCSSCHHHHHHHHT
T ss_pred HHHHHHHHhcCCCEEEEcChh-------HhCCHHHHhhccCCEEEE-----------ccCc--CcCCCCcCHHHHHHHcC
Confidence 346777777777888887653 456776665543222222 3343 33346899999999999
Q ss_pred Cccccccccc--chhHHHHHHhhhcceEEEEeecCCCCccCHHHHHHHHHHHhccCCcchHHHHHHHHHH
Q 017557 274 CQLVLLPNVG--DQIINSRLMGEDLKVGVEVERGDEDGLFTRDGVCKAVKAVMDDDSEVGKDARQNHAEL 341 (369)
Q Consensus 274 vP~i~~P~~~--DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~a~~l 341 (369)
....++-.+. +..+.+.-+.+. -+.+..+ -|.++|.+.+.++- .+-|.+..+.+
T Consensus 151 ~~~tGvTvh~v~~~~D~G~Ii~Q~---~v~I~~~-----dt~~~L~~rl~~~~------~~ll~~~l~~l 206 (229)
T 3auf_A 151 VKVAGCTVHFVTAGVDEGPIILQA---AVPVLEG-----DTVEDLRRRILAEE------HRIYPEAIRLF 206 (229)
T ss_dssp CSEEEEEEEECCSSTTCSCEEEEE---EEECCTT-----CCHHHHHHHHHHHH------HHHHHHHHHHH
T ss_pred CCeEEEEEEEECCCCcCCCEEEEE---EEecCCC-----CCHHHHHHHHHHHH------HHHHHHHHHHH
Confidence 9988877642 333333222222 1223332 57888888776543 34555555544
No 163
>4i6k_A Amidohydrolase family protein; enzyme function initiative, isomerase, structural; HET: CIT; 2.28A {Acinetobacter baumannii}
Probab=30.94 E-value=1.2e+02 Score=26.42 Aligned_cols=72 Identities=13% Similarity=-0.015 Sum_probs=41.9
Q ss_pred hhhhhhhhhcCcceeEeCCCCCCCCCCCchhHHHhhhccCCCCceEEEeeCCCc----cCCHHHHHHHHHHHHhcCCcEE
Q 017557 133 AYCDCVESQFEKRVILAGPVLPEPPASVLEEEFEMLFSSFKAKSLIFCALGSEC----VLKKDQFQELILGFELTGLPFF 208 (369)
Q Consensus 133 ~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~----~~~~~~~~~~~~~l~~~~~~~i 208 (369)
.++....+.+|.+++.+..+.+.. .++++.++.+ . +++=|-+-... ......+..+++.+++.+.+++
T Consensus 83 ~~~~~~~~~~p~r~~g~~~v~P~~----~~~eL~~l~~-~---gv~Gi~l~~~~~~~~~~~~~~~~~~~~~a~~~glpv~ 154 (294)
T 4i6k_A 83 QAMLNAIQQYPDRLKGIAVVQHTT----TFNELVNLKA-Q---GIVGVRLNLFGLNLPALNTPDWQKFLRNVESLNWQVE 154 (294)
T ss_dssp HHHHHHHHHSTTTEEEEECCCTTC----CHHHHHHHHT-T---TEEEEEEECTTSCCCCSSSHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHCCCeEEEEEEeCCcc----cHHHHHHHHH-C---CCcEEEeccCCCCCCCcccHHHHHHHHHHHHcCCEEE
Confidence 334333345677788766665432 2456666543 2 24433332211 2345778889999988899887
Q ss_pred EEEC
Q 017557 209 AALK 212 (369)
Q Consensus 209 ~~~~ 212 (369)
+-++
T Consensus 155 iH~~ 158 (294)
T 4i6k_A 155 LHAP 158 (294)
T ss_dssp EECC
T ss_pred EeeC
Confidence 7654
No 164
>2etv_A Iron(III) ABC transporter, periplasmic iron-bindi protein, putative; periplasmic iron-binding protein, structural genomics; HET: MLY; 1.70A {Thermotoga maritima} SCOP: c.92.2.4
Probab=30.88 E-value=26 Score=31.75 Aligned_cols=36 Identities=17% Similarity=0.520 Sum_probs=24.4
Q ss_pred HHHHHHhhcCCCEEEECC-CC-ChHHHHHHhCCCeEEEe
Q 017557 10 AIEAIVRDIKPNIVFFDF-TY-WLPSLARKLGIKSIAFV 46 (369)
Q Consensus 10 ~l~~~l~~~~pD~vI~D~-~~-~~~~~A~~lgiP~v~~~ 46 (369)
.+++++ +.+||+||... .. -...+.+++|||++.+.
T Consensus 88 n~E~Il-al~PDLIi~~~~~~~~~~~~~~~~GiPvv~~~ 125 (346)
T 2etv_A 88 DLESLI-TLQPDVVFITYVDRXTAXDIQEXTGIPVVVLS 125 (346)
T ss_dssp CHHHHH-HHCCSEEEEESCCHHHHHHHHHHHTSCEEEEC
T ss_pred CHHHHh-cCCCCEEEEeCCccchHHHHHHhcCCcEEEEe
Confidence 455554 47899999865 32 22345677899999874
No 165
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=30.88 E-value=1.4e+02 Score=21.83 Aligned_cols=47 Identities=4% Similarity=0.100 Sum_probs=27.4
Q ss_pred CCcccccccccchhHHHHHHhhhcceEEEEeecCCCCccCHHHHHHHHHHHhc
Q 017557 273 ECQLVLLPNVGDQIINSRLMGEDLKVGVEVERGDEDGLFTRDGVCKAVKAVMD 325 (369)
Q Consensus 273 GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~~l~~ai~~ll~ 325 (369)
.+|+|.+--..+.......+... |+--.+.+. ++.++|..+|+.++.
T Consensus 72 ~~~ii~~s~~~~~~~~~~~~~~~-ga~~~l~KP-----~~~~~L~~~i~~~~~ 118 (139)
T 2jk1_A 72 ETVRIIITGYTDSASMMAAINDA-GIHQFLTKP-----WHPEQLLSSARNAAR 118 (139)
T ss_dssp TSEEEEEESCTTCHHHHHHHHHT-TCCEEEESS-----CCHHHHHHHHHHHHH
T ss_pred CCcEEEEeCCCChHHHHHHHHhh-chhhhccCC-----CCHHHHHHHHHHHHH
Confidence 45555543333333333333333 553345543 799999999999987
No 166
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=30.75 E-value=2.8e+02 Score=24.43 Aligned_cols=33 Identities=15% Similarity=0.095 Sum_probs=18.7
Q ss_pred hCCcccccccccch----------------hHHHHHHhhhcce-EEEEeec
Q 017557 272 NECQLVLLPNVGDQ----------------IINSRLMGEDLKV-GVEVERG 305 (369)
Q Consensus 272 ~GvP~i~~P~~~DQ----------------~~na~~v~~~~g~-G~~l~~~ 305 (369)
+|+|++.-|-+.=| ..-++..... |+ |+.+...
T Consensus 194 ~~~pV~~D~sHs~q~p~~~~~~s~G~r~~v~~~a~AAvA~-GA~gl~IE~H 243 (285)
T 3sz8_A 194 GGCPVIFDVTHSLQCRDPLGDASGGRRRQVLDLARAGIAV-GIAGLFLEAH 243 (285)
T ss_dssp TSCCEEEETTTTCC---------------HHHHHHHHHHH-CCSEEEEEEE
T ss_pred CCCCEEEeCCCccccCCCcCCCCCCchhhHHHHHHHHHHh-CCCEEEEEec
Confidence 36777665655421 3344555566 87 5677654
No 167
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=30.54 E-value=85 Score=23.35 Aligned_cols=40 Identities=8% Similarity=-0.013 Sum_probs=26.3
Q ss_pred HHHHHHHhhcCCCEEEECC-CC--ChHHHHHHh-------CCCeEEEeCc
Q 017557 9 PAIEAIVRDIKPNIVFFDF-TY--WLPSLARKL-------GIKSIAFVTV 48 (369)
Q Consensus 9 ~~l~~~l~~~~pD~vI~D~-~~--~~~~~A~~l-------giP~v~~~~~ 48 (369)
....+.+++.+||+||.|. .+ -+..+.+.+ ++|.+.++..
T Consensus 41 ~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~ 90 (144)
T 3kht_A 41 AKALYQVQQAKYDLIILDIGLPIANGFEVMSAVRKPGANQHTPIVILTDN 90 (144)
T ss_dssp HHHHHHHTTCCCSEEEECTTCGGGCHHHHHHHHHSSSTTTTCCEEEEETT
T ss_pred HHHHHHhhcCCCCEEEEeCCCCCCCHHHHHHHHHhcccccCCCEEEEeCC
Confidence 4455566677899999998 54 344444432 5788887754
No 168
>3j20_B 30S ribosomal protein S2P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=30.53 E-value=32 Score=28.87 Aligned_cols=31 Identities=23% Similarity=0.291 Sum_probs=24.4
Q ss_pred CCCEE-EECC--CCChHHHHHHhCCCeEEEeCch
Q 017557 19 KPNIV-FFDF--TYWLPSLARKLGIKSIAFVTVS 49 (369)
Q Consensus 19 ~pD~v-I~D~--~~~~~~~A~~lgiP~v~~~~~~ 49 (369)
.||++ |.|. ...+..=|.++|||.+++.-+.
T Consensus 111 ~Pdllvv~Dp~~d~~ai~EA~~l~IP~Ial~DTn 144 (202)
T 3j20_B 111 EPDVLIVTDPRADHQAMREAVEIGIPIVALVDTE 144 (202)
T ss_dssp CCSEEEESCTTTSHHHHHHHHHHTCCEEEEECTT
T ss_pred CCCeEEEeCCccchHHHHHHHHcCCCEEEEEcCC
Confidence 48876 5788 4467778999999999987655
No 169
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=30.27 E-value=56 Score=26.12 Aligned_cols=48 Identities=8% Similarity=0.119 Sum_probs=35.3
Q ss_pred HhhcHHHHHHHHhhcCCCEEEECC-CCC---------------hHHHHHHhCCCeEEEeCchHH
Q 017557 4 MDLTEPAIEAIVRDIKPNIVFFDF-TYW---------------LPSLARKLGIKSIAFVTVSPA 51 (369)
Q Consensus 4 ~~~~~~~l~~~l~~~~pD~vI~D~-~~~---------------~~~~A~~lgiP~v~~~~~~~~ 51 (369)
+..+...+.+++++.+||.+..+- +.. ...++...|+|+.-+.|...-
T Consensus 44 l~~i~~~l~~~i~~~~Pd~vaiE~vf~~~n~~s~~~lgqarGv~~~a~~~~~ipv~eytp~~vK 107 (158)
T 1hjr_A 44 LKLIYAGVTEIITQFQPDYFAIEQVFMAKNADSALKLGQARGVAIVAAVNQELPVFEYAARQVK 107 (158)
T ss_dssp HHHHHHHHHHHHHHHCCSEEEEEECCCCCCTTTHHHHHHHHHHHHHHHHTTTCCEEEEEHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeecccccChHHHHHHHHHHHHHHHHHHHcCCCEEEECHHHHH
Confidence 445777899999999999998885 321 144567778998888776544
No 170
>3ga2_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Bacillus subtilis}
Probab=29.91 E-value=54 Score=28.35 Aligned_cols=39 Identities=23% Similarity=0.318 Sum_probs=29.2
Q ss_pred HHHHHHHhhc--CCCEEEECC--------CCChHHHHHHhCCCeEEEeC
Q 017557 9 PAIEAIVRDI--KPNIVFFDF--------TYWLPSLARKLGIKSIAFVT 47 (369)
Q Consensus 9 ~~l~~~l~~~--~pD~vI~D~--------~~~~~~~A~~lgiP~v~~~~ 47 (369)
|.+.+.+++. +||++++|- +..|+.+.-.+|+|+|...=
T Consensus 97 P~ll~al~~L~~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGVAK 145 (246)
T 3ga2_A 97 PLIIEAAKKLETEPDVFLFDGNGYLHYNHMGVATHAAFFLGKPTIGIAK 145 (246)
T ss_dssp HHHHHHHHHCSSCCSCEEEEBCSSSSTTSCCHHHHHHHHHTSCEEEEES
T ss_pred HHHHHHHHhcCCCCCEEEEcCcEEecCCCcchhheeeeecCCCEEeeec
Confidence 5666667665 799999994 33467788888999998753
No 171
>3c3g_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-beta) backbone; helix bundle, foldamer, unknown function protein; HET: HMR B3Q B3D B3E B3L BIL B3K BAL GOL; 1.80A {Synthetic} PDB: 3heu_A* 3het_A* 3hev_A* 3hew_A* 3hey_A* 3hex_A* 3c3h_A*
Probab=29.85 E-value=76 Score=17.99 Aligned_cols=28 Identities=7% Similarity=0.127 Sum_probs=22.8
Q ss_pred HHHHHHHHHhccCCcchHHHHHHHHHHHHHHh
Q 017557 315 GVCKAVKAVMDDDSEVGKDARQNHAELREFLI 346 (369)
Q Consensus 315 ~l~~ai~~ll~~~~~~~~~~~~~a~~l~~~~~ 346 (369)
+|.+.+++++.. +..+...+.++++.+.
T Consensus 4 QLEdKvEeLl~~----~~~Le~EV~RLk~lL~ 31 (33)
T 3c3g_A 4 XIEXKLXEIXSK----XYHXENXLARIKXLLX 31 (33)
T ss_dssp HHHHHHHHHHHH----HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHH----hhHHHHHHHHHHHHHc
Confidence 678889999973 6788888999888775
No 172
>1p6q_A CHEY2; chemotaxis, signal transduction, response regulator, structural proteomics in europe, spine, structural genomics; NMR {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1p6u_A
Probab=29.81 E-value=79 Score=22.89 Aligned_cols=39 Identities=15% Similarity=0.022 Sum_probs=25.0
Q ss_pred HHHHHHHhhcCCCEEEECC-CC--ChHHHHHHh-------CCCeEEEeC
Q 017557 9 PAIEAIVRDIKPNIVFFDF-TY--WLPSLARKL-------GIKSIAFVT 47 (369)
Q Consensus 9 ~~l~~~l~~~~pD~vI~D~-~~--~~~~~A~~l-------giP~v~~~~ 47 (369)
....+.++..+||+||.|. .+ -+..+++++ ++|.+.++.
T Consensus 41 ~~a~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~ 89 (129)
T 1p6q_A 41 EQGMKIMAQNPHHLVISDFNMPKMDGLGLLQAVRANPATKKAAFIILTA 89 (129)
T ss_dssp HHHHHHHHTSCCSEEEECSSSCSSCHHHHHHHHTTCTTSTTCEEEECCS
T ss_pred HHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHhcCccccCCCEEEEeC
Confidence 3444566667899999998 54 456666654 355565544
No 173
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=29.33 E-value=75 Score=22.97 Aligned_cols=40 Identities=15% Similarity=0.027 Sum_probs=25.5
Q ss_pred HHHHHHHhhcCCCEEEECC-CC--ChHHHHHH-------hCCCeEEEeCc
Q 017557 9 PAIEAIVRDIKPNIVFFDF-TY--WLPSLARK-------LGIKSIAFVTV 48 (369)
Q Consensus 9 ~~l~~~l~~~~pD~vI~D~-~~--~~~~~A~~-------lgiP~v~~~~~ 48 (369)
....+.+++.+||+||.|. .+ -+..++++ -++|.+.++..
T Consensus 37 ~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 86 (127)
T 3i42_A 37 TDALHAMSTRGYDAVFIDLNLPDTSGLALVKQLRALPMEKTSKFVAVSGF 86 (127)
T ss_dssp HHHHHHHHHSCCSEEEEESBCSSSBHHHHHHHHHHSCCSSCCEEEEEECC
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhhccCCCCEEEEECC
Confidence 4455566777899999998 44 34555443 24677766543
No 174
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=29.24 E-value=1.5e+02 Score=24.83 Aligned_cols=113 Identities=11% Similarity=0.060 Sum_probs=66.4
Q ss_pred HHHHHHHhcCCcEEEEECCCCCCCccccCCchhHHHHhcCCCeeEecccChHHhhcCCCccceeecCCCchHHHHHHhCC
Q 017557 195 ELILGFELTGLPFFAALKPPTGHDTIESALPEGFEERVKGRGFVHGGWVQQQLILKHPSVGCFVTHCGSGSLSEAMVNEC 274 (369)
Q Consensus 195 ~~~~~l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~~~~~ItHgG~~s~~Eal~~Gv 274 (369)
++++.++..+..+++..+.. .-+|+.+.+..+.+-+-+ ||++ .=...|++.+..|+.+|.
T Consensus 73 ~~~~~l~~~~~Dliv~a~y~-------~il~~~~l~~~~~~~iNi-----------HpSL--LP~yrG~~pi~~Ai~~G~ 132 (212)
T 3av3_A 73 EILRELKGRQIDWIALAGYM-------RLIGPTLLSAYEGKIVNI-----------HPSL--LPAFPGKDAIGQAYRAGV 132 (212)
T ss_dssp HHHHHHHHTTCCEEEESSCC-------SCCCHHHHHHTTTCEEEE-----------ESSC--TTSSCSTTHHHHHHHHTC
T ss_pred HHHHHHHhcCCCEEEEchhh-------hhCCHHHHhhhcCCEEEE-----------ecCc--CCCCCCcCHHHHHHHcCC
Confidence 57777777778888887643 456776665543222222 4444 444568899999999999
Q ss_pred ccccccccc--chhHHHHHHhhhcceEEEEeecCCCCccCHHHHHHHHHHHhccCCcchHHHHHHHHHH
Q 017557 275 QLVLLPNVG--DQIINSRLMGEDLKVGVEVERGDEDGLFTRDGVCKAVKAVMDDDSEVGKDARQNHAEL 341 (369)
Q Consensus 275 P~i~~P~~~--DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~a~~l 341 (369)
...++-.+. +..+.+.-+.+. -+.+..+ -|.++|.+.+.++- .+-|.+..+.+
T Consensus 133 ~~tGvTvh~v~~~~D~G~Ii~Q~---~v~I~~~-----dt~~~L~~r~~~~~------~~ll~~~l~~~ 187 (212)
T 3av3_A 133 SETGVTVHYVDEGMDTGPVIAQR---VVPIVPG-----EPIEALEERIHQVE------HELYPTVLRML 187 (212)
T ss_dssp SEEEEEEEECCSSSSCSCEEEEE---EEECCTT-----CCHHHHHHHHHHHH------HHHHHHHHHHH
T ss_pred CeEEEEEEEECCCCCCCCEEEEE---EEecCCC-----CCHHHHHHHHHHHH------HHHHHHHHHHH
Confidence 888877642 222222222211 1222332 58888888776543 34555555554
No 175
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=29.06 E-value=36 Score=30.64 Aligned_cols=37 Identities=27% Similarity=0.391 Sum_probs=24.2
Q ss_pred HHHHHHhhcCCCEEEECC-CCChHHHHHHhCCCeEEEeC
Q 017557 10 AIEAIVRDIKPNIVFFDF-TYWLPSLARKLGIKSIAFVT 47 (369)
Q Consensus 10 ~l~~~l~~~~pD~vI~D~-~~~~~~~A~~lgiP~v~~~~ 47 (369)
.++.++ +.+||+||... ..-...--+++|||++.+.+
T Consensus 108 n~E~i~-al~PDLIi~~~~~~~~~~~L~~~gipvv~~~~ 145 (335)
T 4hn9_A 108 NTEACV-AATPDVVFLPMKLKKTADTLESLGIKAVVVNP 145 (335)
T ss_dssp CHHHHH-HTCCSEEEEEGGGHHHHHHHHHTTCCEEEECC
T ss_pred CHHHHH-hcCCCEEEEeCcchhHHHHHHHcCCCEEEEcC
Confidence 344443 57999999876 33233344567999999864
No 176
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=29.02 E-value=56 Score=27.76 Aligned_cols=36 Identities=14% Similarity=0.249 Sum_probs=24.2
Q ss_pred HHHHHHhhcCCCEEEECC-CCC--hHHHHHHhCCCeEEEe
Q 017557 10 AIEAIVRDIKPNIVFFDF-TYW--LPSLARKLGIKSIAFV 46 (369)
Q Consensus 10 ~l~~~l~~~~pD~vI~D~-~~~--~~~~A~~lgiP~v~~~ 46 (369)
.+++++ +.+||+||... ... ...--++.|||++.+.
T Consensus 51 n~E~i~-~l~PDlIi~~~~~~~~~~~~~L~~~gipvv~~~ 89 (255)
T 3md9_A 51 NAEGIL-AMKPTMLLVSELAQPSLVLTQIASSGVNVVTVP 89 (255)
T ss_dssp CHHHHH-TTCCSEEEEETTCSCHHHHHHHHHTTCEEEEEC
T ss_pred CHHHHH-ccCCCEEEEcCCcCchhHHHHHHHcCCcEEEeC
Confidence 344444 68999999887 432 2334456799999875
No 177
>3c97_A Signal transduction histidine kinase; structural genomics, signaling, PSI-2, protein structure initiative; 1.70A {Aspergillus oryzae RIB40}
Probab=28.93 E-value=1.2e+02 Score=22.41 Aligned_cols=30 Identities=3% Similarity=-0.055 Sum_probs=19.4
Q ss_pred HHHHHHHhhcCCCEEEECC-CC--ChHHHHHHh
Q 017557 9 PAIEAIVRDIKPNIVFFDF-TY--WLPSLARKL 38 (369)
Q Consensus 9 ~~l~~~l~~~~pD~vI~D~-~~--~~~~~A~~l 38 (369)
....+.+++.+||+||.|. .+ -+..+++.+
T Consensus 44 ~~al~~l~~~~~dlvllD~~lp~~~g~~~~~~l 76 (140)
T 3c97_A 44 LQALQAYQNRQFDVIIMDIQMPVMDGLEAVSEI 76 (140)
T ss_dssp HHHHHHHHHSCCSEEEECTTCCSSCHHHHHHHH
T ss_pred HHHHHHHhcCCCCEEEEeCCCCCCcHHHHHHHH
Confidence 3444555667899999998 54 355555543
No 178
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=28.90 E-value=1.5e+02 Score=24.93 Aligned_cols=114 Identities=13% Similarity=0.136 Sum_probs=65.4
Q ss_pred HHHHHHHHhcCCcEEEEECCCCCCCccccCCchhHHHHhcCCCeeEecccChHHhhcCCCccceeecCCCchHHHHHHhC
Q 017557 194 QELILGFELTGLPFFAALKPPTGHDTIESALPEGFEERVKGRGFVHGGWVQQQLILKHPSVGCFVTHCGSGSLSEAMVNE 273 (369)
Q Consensus 194 ~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~~~~~ItHgG~~s~~Eal~~G 273 (369)
.++++.|+..+..+++..+.. .-+|+.+.+..+.+-+-+ |+++ .=...|+..+..|+.+|
T Consensus 71 ~~~~~~l~~~~~Dliv~agy~-------~Il~~~~l~~~~~~~iNi-----------HpSL--LP~yrG~~pi~~Ai~~G 130 (211)
T 3p9x_A 71 IEVVQQLKEKQIDFVVLAGYM-------RLVGPTLLGAYEGRIVNI-----------HPSL--LPAFPGLHAIEQAIRAN 130 (211)
T ss_dssp HHHHHHHHHTTCCEEEESSCC-------SCCCHHHHHHHTTSEEEE-----------ESSC--TTSSCSSCHHHHHHHTT
T ss_pred HHHHHHHHhcCCCEEEEeCch-------hhcCHHHHhhccCCeEEE-----------CCcc--CCCCCCccHHHHHHHcC
Confidence 457777777777888877643 456776665543322222 3444 33445889999999999
Q ss_pred Cccccccccc--chhHHHHHHhhhcceEEEEeecCCCCccCHHHHHHHHHHHhccCCcchHHHHHHHHHH
Q 017557 274 CQLVLLPNVG--DQIINSRLMGEDLKVGVEVERGDEDGLFTRDGVCKAVKAVMDDDSEVGKDARQNHAEL 341 (369)
Q Consensus 274 vP~i~~P~~~--DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~a~~l 341 (369)
....++-.+. +..+.+.-+.+. -+.+..+ -|.++|.+.+.++- .+-|.+..+.+
T Consensus 131 ~~~tGvTvh~v~~~~D~G~Ii~Q~---~v~I~~~-----dt~~~L~~rl~~~~------~~ll~~~l~~l 186 (211)
T 3p9x_A 131 VKVTGVTIHYVDEGMDTGPIIAQE---AVSIEEE-----DTLETLTTKIQAVE------HRLYPATLHKL 186 (211)
T ss_dssp CSEEEEEEEECCSSSSCSCEEEEE---EEECCTT-----CCHHHHHHHHHHHH------HHHHHHHHHHH
T ss_pred CCeEEEEEEEEcCCCCCCCEEEEE---EEecCCC-----CCHHHHHHHHHHHH------HHHHHHHHHHH
Confidence 9887777642 222222222211 1222232 47888888776543 34455555544
No 179
>2b4a_A BH3024; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.42A {Bacillus halodurans} SCOP: c.23.1.1
Probab=28.74 E-value=77 Score=23.40 Aligned_cols=38 Identities=8% Similarity=-0.063 Sum_probs=25.7
Q ss_pred HHHHHHHhh-cCCCEEEECC-CC--ChHHHHHHh-----CCCeEEEe
Q 017557 9 PAIEAIVRD-IKPNIVFFDF-TY--WLPSLARKL-----GIKSIAFV 46 (369)
Q Consensus 9 ~~l~~~l~~-~~pD~vI~D~-~~--~~~~~A~~l-----giP~v~~~ 46 (369)
....+.+++ .+||+||.|. .+ -+..+.+.+ ++|.+.++
T Consensus 49 ~~al~~l~~~~~~dlvilD~~l~~~~g~~~~~~l~~~~~~~~ii~ls 95 (138)
T 2b4a_A 49 SAFFQHRSQLSTCDLLIVSDQLVDLSIFSLLDIVKEQTKQPSVLILT 95 (138)
T ss_dssp HHHHHTGGGGGSCSEEEEETTCTTSCHHHHHHHHTTSSSCCEEEEEE
T ss_pred HHHHHHHHhCCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCCEEEEE
Confidence 344455666 7899999998 44 456666665 46777765
No 180
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=28.54 E-value=66 Score=24.43 Aligned_cols=39 Identities=21% Similarity=-0.002 Sum_probs=25.5
Q ss_pred HHHHHhhcCCCEEEECC-CC--ChHHHHHHh-----CCCeEEEeCch
Q 017557 11 IEAIVRDIKPNIVFFDF-TY--WLPSLARKL-----GIKSIAFVTVS 49 (369)
Q Consensus 11 l~~~l~~~~pD~vI~D~-~~--~~~~~A~~l-----giP~v~~~~~~ 49 (369)
..+.+++.+||+||.|. .+ .+..+.+.+ ++|.+.++...
T Consensus 39 a~~~l~~~~~dliild~~l~~~~g~~~~~~l~~~~~~~pii~ls~~~ 85 (155)
T 1qkk_A 39 ALAGLSADFAGIVISDIRMPGMDGLALFRKILALDPDLPMILVTGHG 85 (155)
T ss_dssp HHHTCCTTCCSEEEEESCCSSSCHHHHHHHHHHHCTTSCEEEEECGG
T ss_pred HHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCCEEEEECCC
Confidence 33444455799999998 44 345544443 68998887654
No 181
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=28.31 E-value=3.1e+02 Score=24.84 Aligned_cols=67 Identities=13% Similarity=0.055 Sum_probs=42.0
Q ss_pred CceEEEeeCCCccCCHHHHHHHHHHHHhcCCcEEEEECCCCCCCccccCCchhHHHHhcCCCeeEecccChHHhhcCCCc
Q 017557 175 KSLIFCALGSECVLKKDQFQELILGFELTGLPFFAALKPPTGHDTIESALPEGFEERVKGRGFVHGGWVQQQLILKHPSV 254 (369)
Q Consensus 175 ~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~~ 254 (369)
+.+-.|.+|.++ ..+++.+...+.+++..-.. ..+....... ++. ......++++.+++
T Consensus 165 ktvGIIG~G~IG-------~~vA~~l~~~G~~V~~~dr~---------~~~~~~~~~~---g~~--~~~~l~ell~~aDv 223 (351)
T 3jtm_A 165 KTIGTVGAGRIG-------KLLLQRLKPFGCNLLYHDRL---------QMAPELEKET---GAK--FVEDLNEMLPKCDV 223 (351)
T ss_dssp CEEEEECCSHHH-------HHHHHHHGGGCCEEEEECSS---------CCCHHHHHHH---CCE--ECSCHHHHGGGCSE
T ss_pred CEEeEEEeCHHH-------HHHHHHHHHCCCEEEEeCCC---------ccCHHHHHhC---CCe--EcCCHHHHHhcCCE
Confidence 458899999998 77888888888885543221 1121211111 222 12256789999999
Q ss_pred cceeecCCCc
Q 017557 255 GCFVTHCGSG 264 (369)
Q Consensus 255 ~~~ItHgG~~ 264 (369)
++.|+-.+
T Consensus 224 --V~l~~Plt 231 (351)
T 3jtm_A 224 --IVINMPLT 231 (351)
T ss_dssp --EEECSCCC
T ss_pred --EEECCCCC
Confidence 99988643
No 182
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=28.17 E-value=54 Score=29.83 Aligned_cols=29 Identities=10% Similarity=-0.017 Sum_probs=20.2
Q ss_pred CCCccceeec-CCCchHHHHHHhCCccccccc
Q 017557 251 HPSVGCFVTH-CGSGSLSEAMVNECQLVLLPN 281 (369)
Q Consensus 251 ~~~~~~~ItH-gG~~s~~Eal~~GvP~i~~P~ 281 (369)
.+++ +|+| .+..+..-|-..|+|.+..-.
T Consensus 123 ~pDl--Vv~d~~~~~~~~~a~~~giP~v~~~~ 152 (398)
T 4fzr_A 123 KPDL--VLTETYSLTGPLVAATLGIPWIEQSI 152 (398)
T ss_dssp CCSE--EEEETTCTHHHHHHHHHTCCEEEECC
T ss_pred CCCE--EEECccccHHHHHHHhhCCCEEEecc
Confidence 4777 8876 455556666778999887543
No 183
>3ij6_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structure initiative; 2.00A {Lactobacillus acidophilus}
Probab=28.13 E-value=51 Score=29.40 Aligned_cols=72 Identities=4% Similarity=-0.068 Sum_probs=37.0
Q ss_pred hcCccee-EeCCCCCCCCCCCchhHHHhhhccCCCCceEEEeeCCCccCCHHHHHHHHHHHHhcCCcEEEEECC
Q 017557 141 QFEKRVI-LAGPVLPEPPASVLEEEFEMLFSSFKAKSLIFCALGSECVLKKDQFQELILGFELTGLPFFAALKP 213 (369)
Q Consensus 141 ~~~~~~~-~vGp~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~ 213 (369)
..|.+++ .+|-+-...+ ..-.+++....+..+-+++-+-+...........+..+.+++++.+.++.+-.+.
T Consensus 92 ~~p~rf~g~~a~vp~~~~-~~a~~el~r~~~~~G~~Gv~l~~~~~~~~l~d~~~~p~~~~~~e~g~pv~iH~g~ 164 (312)
T 3ij6_A 92 QHPGKFAGAVAILPMNNI-ESACKVISSIKDDENLVGAQIFTRHLGKSIADKEFRPVLAQAAKLHVPLWMHPVF 164 (312)
T ss_dssp HCTTTEEEEEEECCTTCH-HHHHHHHHHHHHCTTEEEEEEESEETTEETTSTTTHHHHHHHHHTTCCEEEECCC
T ss_pred hCCCceeeeEEecCccCH-HHHHHHHHHHHHhCCCceEeccCCCCCCCCCCccHHHHHHHHHHcCCeEEEcCCC
Confidence 4555665 5665432211 0113456666544332223222111112244567888999999999987766543
No 184
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=28.10 E-value=1.1e+02 Score=22.07 Aligned_cols=30 Identities=17% Similarity=0.105 Sum_probs=19.7
Q ss_pred HHHHHHHhhcCCCEEEECC-CC--ChHHHHHHh
Q 017557 9 PAIEAIVRDIKPNIVFFDF-TY--WLPSLARKL 38 (369)
Q Consensus 9 ~~l~~~l~~~~pD~vI~D~-~~--~~~~~A~~l 38 (369)
....+.+++.+||+||.|. .+ -+..+++.+
T Consensus 40 ~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l 72 (132)
T 3lte_A 40 FDAGIKLSTFEPAIMTLDLSMPKLDGLDVIRSL 72 (132)
T ss_dssp HHHHHHHHHTCCSEEEEESCBTTBCHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEecCCCCCCHHHHHHHH
Confidence 3445566677899999998 43 355555544
No 185
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=28.09 E-value=1e+02 Score=22.99 Aligned_cols=41 Identities=12% Similarity=0.054 Sum_probs=26.4
Q ss_pred HHHHHHHhhcCCCEEEECC-CC--ChHHHHHH-------hCCCeEEEeCch
Q 017557 9 PAIEAIVRDIKPNIVFFDF-TY--WLPSLARK-------LGIKSIAFVTVS 49 (369)
Q Consensus 9 ~~l~~~l~~~~pD~vI~D~-~~--~~~~~A~~-------lgiP~v~~~~~~ 49 (369)
....+.+++.+||+||.|. .+ -+..+++. -++|.+.++...
T Consensus 42 ~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~pii~ls~~~ 92 (147)
T 2zay_A 42 IEAVPVAVKTHPHLIITEANMPKISGMDLFNSLKKNPQTASIPVIALSGRA 92 (147)
T ss_dssp HHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHTSTTTTTSCEEEEESSC
T ss_pred HHHHHHHHcCCCCEEEEcCCCCCCCHHHHHHHHHcCcccCCCCEEEEeCCC
Confidence 3445556666899999998 44 34444443 357888877543
No 186
>1kgs_A DRRD, DNA binding response regulator D; DNA-binding protein, ALPH-beta sandwich, winged-helix, helix helix, DNA binding protein; HET: DNA MSE; 1.50A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nnn_A*
Probab=28.02 E-value=99 Score=25.18 Aligned_cols=40 Identities=8% Similarity=-0.002 Sum_probs=27.2
Q ss_pred HHHHHHhhcCCCEEEECC-CC--ChHHHHHHh-----CCCeEEEeCch
Q 017557 10 AIEAIVRDIKPNIVFFDF-TY--WLPSLARKL-----GIKSIAFVTVS 49 (369)
Q Consensus 10 ~l~~~l~~~~pD~vI~D~-~~--~~~~~A~~l-----giP~v~~~~~~ 49 (369)
...+.+++.+||+||.|. .+ -+..+++.+ ++|.+.++...
T Consensus 37 ~a~~~~~~~~~dlvllD~~l~~~~g~~~~~~lr~~~~~~~ii~ls~~~ 84 (225)
T 1kgs_A 37 EGMYMALNEPFDVVILDIMLPVHDGWEILKSMRESGVNTPVLMLTALS 84 (225)
T ss_dssp HHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEESSC
T ss_pred HHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEeCCC
Confidence 344556667899999998 54 355555443 68888887654
No 187
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=27.98 E-value=71 Score=28.79 Aligned_cols=72 Identities=10% Similarity=0.084 Sum_probs=46.9
Q ss_pred CHHHHHHHHHHHHhcCCcEEEEECCCCCCCccccCCchhHHHHhcCCCeeEecccChHHhhcCCCccceeecCCCchHHH
Q 017557 189 KKDQFQELILGFELTGLPFFAALKPPTGHDTIESALPEGFEERVKGRGFVHGGWVQQQLILKHPSVGCFVTHCGSGSLSE 268 (369)
Q Consensus 189 ~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~~~~~ItHgG~~s~~E 268 (369)
+.++...+.+++...+.+.||..+.+.. -.++.++++...+-++|+. |+-....++++-
T Consensus 63 d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g-------------------~~rlL~~LD~~~i~~~PK~--~~GySDiT~L~~ 121 (327)
T 4h1h_A 63 IRSRVADIHEAFNDSSVKAILTVIGGFN-------------------SNQLLPYLDYDLISENPKI--LCGFSDITALAT 121 (327)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESCCCSC-------------------GGGGGGGCCHHHHHHSCCE--EEECTTHHHHHH
T ss_pred HHHHHHHHHHHhhCCCCCEEEEcCCchh-------------------HHHHhhhcchhhhccCCeE--EEecccccHHHH
Confidence 3567888999999999999999876521 1223355555566667766 777777777766
Q ss_pred HHH--hCCccccccc
Q 017557 269 AMV--NECQLVLLPN 281 (369)
Q Consensus 269 al~--~GvP~i~~P~ 281 (369)
+++ .|+..+.=|.
T Consensus 122 al~~~~g~~t~hGp~ 136 (327)
T 4h1h_A 122 AIYTQTELITYSGAH 136 (327)
T ss_dssp HHHHHHCBCEEECCC
T ss_pred HHHHhcCeEEEeCcc
Confidence 665 3444444443
No 188
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=27.91 E-value=46 Score=24.92 Aligned_cols=65 Identities=9% Similarity=0.094 Sum_probs=43.5
Q ss_pred hcCCCccceeecCCCch---------HHHHHHhCCcccccccccchhHHHHHHhhhcceEEEEeecCCCCccCHHHHHHH
Q 017557 249 LKHPSVGCFVTHCGSGS---------LSEAMVNECQLVLLPNVGDQIINSRLMGEDLKVGVEVERGDEDGLFTRDGVCKA 319 (369)
Q Consensus 249 L~~~~~~~~ItHgG~~s---------~~Eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~~l~~a 319 (369)
+..+++ +|--+|..| +-.|...|+|+|++=-++.+.. -..+++. +.- +-. ++.+.|.++
T Consensus 36 I~~~~~--vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV~~~g~~~~-P~~l~~~-a~~--iV~------Wn~~~I~~a 103 (111)
T 1eiw_A 36 PEDADA--VIVLAGLWGTRRDEILGAVDLARKSSKPIITVRPYGLENV-PPELEAV-SSE--VVG------WNPHCIRDA 103 (111)
T ss_dssp SSSCSE--EEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEECCSSSSCC-CTTHHHH-CSE--EEC------SCHHHHHHH
T ss_pred cccCCE--EEEEeCCCcCCChHHHHHHHHHHHcCCCEEEEEcCCCCcC-CHHHHhh-Cce--ecc------CCHHHHHHH
Confidence 455667 888888887 4567779999999877665411 1124433 322 222 789999999
Q ss_pred HHHHhc
Q 017557 320 VKAVMD 325 (369)
Q Consensus 320 i~~ll~ 325 (369)
|+..++
T Consensus 104 I~~~~~ 109 (111)
T 1eiw_A 104 LEDALD 109 (111)
T ss_dssp HHHHHC
T ss_pred HHhccC
Confidence 988764
No 189
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=27.73 E-value=99 Score=23.57 Aligned_cols=40 Identities=8% Similarity=-0.015 Sum_probs=26.4
Q ss_pred HHHHHHHhhc--CCCEEEECC-CC--ChHHHHHHh-----CCCeEEEeCc
Q 017557 9 PAIEAIVRDI--KPNIVFFDF-TY--WLPSLARKL-----GIKSIAFVTV 48 (369)
Q Consensus 9 ~~l~~~l~~~--~pD~vI~D~-~~--~~~~~A~~l-----giP~v~~~~~ 48 (369)
....+.+++. +||+||.|. .+ -+..+++.+ ++|.+.++..
T Consensus 71 ~~al~~l~~~~~~~dliilD~~l~~~~g~~~~~~lr~~~~~~~ii~ls~~ 120 (157)
T 3hzh_A 71 EEAVIKYKNHYPNIDIVTLXITMPKMDGITCLSNIMEFDKNARVIMISAL 120 (157)
T ss_dssp HHHHHHHHHHGGGCCEEEECSSCSSSCHHHHHHHHHHHCTTCCEEEEESC
T ss_pred HHHHHHHHhcCCCCCEEEEeccCCCccHHHHHHHHHhhCCCCcEEEEecc
Confidence 3455566666 789999998 44 345555443 5888887654
No 190
>1ys7_A Transcriptional regulatory protein PRRA; response regulator, DNA binding domain, phosphorylation; 1.58A {Mycobacterium tuberculosis} SCOP: a.4.6.1 c.23.1.1 PDB: 1ys6_A
Probab=27.47 E-value=1e+02 Score=25.30 Aligned_cols=39 Identities=10% Similarity=0.079 Sum_probs=25.7
Q ss_pred HHHHHHhhcCCCEEEECC-CC--ChHHHHHHh-----CCCeEEEeCc
Q 017557 10 AIEAIVRDIKPNIVFFDF-TY--WLPSLARKL-----GIKSIAFVTV 48 (369)
Q Consensus 10 ~l~~~l~~~~pD~vI~D~-~~--~~~~~A~~l-----giP~v~~~~~ 48 (369)
...+.+++.+||+||.|. .+ -+..+++.+ ++|.+.++..
T Consensus 42 ~a~~~~~~~~~dlvllD~~l~~~~g~~~~~~l~~~~~~~~ii~lt~~ 88 (233)
T 1ys7_A 42 EALRSATENRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCVLSAR 88 (233)
T ss_dssp HHHHHHHHSCCSEEEEESSCSSSCHHHHHHHHHHTTCCCCEEEEECC
T ss_pred HHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEEcC
Confidence 344556667899999998 54 355555443 6788776643
No 191
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=27.43 E-value=1.1e+02 Score=24.70 Aligned_cols=49 Identities=10% Similarity=0.211 Sum_probs=36.8
Q ss_pred HhhcHHHHHHHHhhcCCCEEEECC-CCC---------------hHHHHHHhCCCeEEEeCchHHH
Q 017557 4 MDLTEPAIEAIVRDIKPNIVFFDF-TYW---------------LPSLARKLGIKSIAFVTVSPAT 52 (369)
Q Consensus 4 ~~~~~~~l~~~l~~~~pD~vI~D~-~~~---------------~~~~A~~lgiP~v~~~~~~~~~ 52 (369)
+..+...+.+++++.+||.+..+- +.. +..++.+.|+|+.-+.|...--
T Consensus 48 L~~I~~~l~~~i~~~~Pd~vaiE~~F~~~n~~sal~lgqarGv~~la~~~~glpv~eytP~~vKk 112 (166)
T 4ep4_A 48 VGRIHARVLEVLHRFRPEAVAVEEQFFYRQNELAYKVGWALGAVLVAAFEAGVPVYAYGPMQVKQ 112 (166)
T ss_dssp HHHHHHHHHHHHHHHCCSEEEEECCCCSSCSHHHHHHHHHHHHHHHHHHHHTCCEEEECHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeehhhccChHHHHHHHHHHHHHHHHHHHcCCCEEEECHHHHHH
Confidence 456778899999999999999886 431 2345678899999987765543
No 192
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=27.12 E-value=1.5e+02 Score=24.42 Aligned_cols=79 Identities=15% Similarity=0.169 Sum_probs=48.1
Q ss_pred hHHhhcCCCccceeecCCCchHHH-------------HHHhCCccccccccc----ch---hHHHHHHhhhcceEEEEee
Q 017557 245 QQLILKHPSVGCFVTHCGSGSLSE-------------AMVNECQLVLLPNVG----DQ---IINSRLMGEDLKVGVEVER 304 (369)
Q Consensus 245 q~~lL~~~~~~~~ItHgG~~s~~E-------------al~~GvP~i~~P~~~----DQ---~~na~~v~~~~g~G~~l~~ 304 (369)
+.++...+++ .+|.=|-+||+.. ++..++|++..|-.. .. ..|...+.+. |+=+.-..
T Consensus 75 hi~l~~~aD~-~vIaPaTanTlAKiA~GiaDnLlt~~a~a~~~pvvl~Pamn~~m~~~p~~~~Nl~~L~~~-G~~iv~p~ 152 (194)
T 1p3y_1 75 HVEIGRWADI-YCIIPATANILGQTANGVAMNLVATTVLAHPHNTIFFPNMNDLMWNKTVVSRNIEQLRKD-GHIVIEPV 152 (194)
T ss_dssp HHHHHHHCSE-EEEEEECHHHHHHHHTTCCSSHHHHHHHHSSSCCEEEECCCHHHHTCHHHHHHHHHHHHH-TCEECCCB
T ss_pred cccccccCCE-EEEeCCCHHHHHHHHhhccCCHHHHHHHHcCCCEEEEECCChhhcCCHHHHHHHHHHHHC-CCEEECCC
Confidence 4445454553 3555555554442 255789999999632 22 4577888887 87443222
Q ss_pred cC-----------C-CCccCHHHHHHHHHHHhc
Q 017557 305 GD-----------E-DGLFTRDGVCKAVKAVMD 325 (369)
Q Consensus 305 ~~-----------~-~~~~~~~~l~~ai~~ll~ 325 (369)
.. . +...+.++|.+.+.+.+.
T Consensus 153 ~g~~f~lacg~~g~~g~~~~~~~iv~~v~~~l~ 185 (194)
T 1p3y_1 153 EIMAFEIATGTRKPNRGLITPDKALLAIEKGFK 185 (194)
T ss_dssp CCC------------CBCCCHHHHHHHHHHHCC
T ss_pred CCcccccccCCcCcCCCCCCHHHHHHHHHHHhc
Confidence 21 1 344678888888888876
No 193
>2bni_A General control protein GCN4; four helix bundle, antiparallel four helix bundle acyl transferase; HET: TYZ; 1.5A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2ccn_A 1w5k_A* 2ccf_A 2cce_A 1w5j_A* 1uo2_A 1gcl_A 1uo1_A 1unv_A 1uo0_A 1unt_A 1uo5_A 1unz_A 1unx_A 1unu_A 1unw_A 1uo4_A 1uo3_A 1uny_A 1u9f_A* ...
Probab=27.09 E-value=80 Score=18.05 Aligned_cols=28 Identities=11% Similarity=0.292 Sum_probs=22.2
Q ss_pred HHHHHHHHHhccCCcchHHHHHHHHHHHHHHh
Q 017557 315 GVCKAVKAVMDDDSEVGKDARQNHAELREFLI 346 (369)
Q Consensus 315 ~l~~ai~~ll~~~~~~~~~~~~~a~~l~~~~~ 346 (369)
+|.+.++++|.. +..+...+.++++.+.
T Consensus 5 QLEdKvEeLl~~----~~~L~~EV~RLk~lL~ 32 (34)
T 2bni_A 5 QIEDKLEEILSK----GHHICNELARIKKLLG 32 (34)
T ss_dssp HHHHHHHHHHHH----HHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHc----cHHHHHHHHHHHHHhc
Confidence 678889999973 7788888999888765
No 194
>2q8p_A Iron-regulated surface determinant E; helical backbone metal receptor superfamily, metal transport; HET: HEM; 1.95A {Staphylococcus aureus subsp} PDB: 2q8q_A*
Probab=26.99 E-value=33 Score=29.35 Aligned_cols=37 Identities=19% Similarity=0.245 Sum_probs=24.3
Q ss_pred HHHHHHhhcCCCEEEECC-CC-ChHHHHHHhCCCeEEEeC
Q 017557 10 AIEAIVRDIKPNIVFFDF-TY-WLPSLARKLGIKSIAFVT 47 (369)
Q Consensus 10 ~l~~~l~~~~pD~vI~D~-~~-~~~~~A~~lgiP~v~~~~ 47 (369)
.++.++ +.+||+||... .. -....-+++|||++.+..
T Consensus 52 n~E~i~-~l~PDLIi~~~~~~~~~~~~L~~~gipvv~~~~ 90 (260)
T 2q8p_A 52 NVEAVK-KLKPTHVLSVSTIKDEMQPFYKQLNMKGYFYDF 90 (260)
T ss_dssp CHHHHH-HTCCSEEEEEGGGHHHHHHHHHHHTSCCEEECC
T ss_pred CHHHHH-hcCCCEEEecCccCHHHHHHHHHcCCcEEEecC
Confidence 444444 57999999865 32 223445677999998754
No 195
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=26.99 E-value=71 Score=25.38 Aligned_cols=41 Identities=10% Similarity=-0.031 Sum_probs=26.9
Q ss_pred HHHHHHHhhcCCCEEEECC-CC--ChHHHHHHh-----CCCeEEEeCch
Q 017557 9 PAIEAIVRDIKPNIVFFDF-TY--WLPSLARKL-----GIKSIAFVTVS 49 (369)
Q Consensus 9 ~~l~~~l~~~~pD~vI~D~-~~--~~~~~A~~l-----giP~v~~~~~~ 49 (369)
....+.+++.+||+||.|. .+ -+..+++.+ ++|.+.++...
T Consensus 41 ~~al~~~~~~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~lt~~~ 89 (184)
T 3rqi_A 41 DEALKLAGAEKFEFITVXLHLGNDSGLSLIAPLCDLQPDARILVLTGYA 89 (184)
T ss_dssp HHHHHHHTTSCCSEEEECSEETTEESHHHHHHHHHHCTTCEEEEEESSC
T ss_pred HHHHHHHhhCCCCEEEEeccCCCccHHHHHHHHHhcCCCCCEEEEeCCC
Confidence 3445566677899999998 54 345555433 58888877543
No 196
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=26.91 E-value=1.2e+02 Score=21.79 Aligned_cols=39 Identities=8% Similarity=-0.041 Sum_probs=25.4
Q ss_pred HHHHHHhhcCCCEEEECC-CC--ChHHHHHHh-------CCCeEEEeCc
Q 017557 10 AIEAIVRDIKPNIVFFDF-TY--WLPSLARKL-------GIKSIAFVTV 48 (369)
Q Consensus 10 ~l~~~l~~~~pD~vI~D~-~~--~~~~~A~~l-------giP~v~~~~~ 48 (369)
...+.+++.+||+||.|. .+ -+..+++.+ .+|.+.++..
T Consensus 40 ~a~~~~~~~~~dlvi~D~~l~~~~g~~l~~~l~~~~~~~~~~ii~~s~~ 88 (128)
T 1jbe_A 40 DALNKLQAGGYGFVISDWNMPNMDGLELLKTIRAXXAMSALPVLMVTAE 88 (128)
T ss_dssp HHHHHHTTCCCCEEEEESCCSSSCHHHHHHHHHC--CCTTCCEEEEESS
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhcccCCCcEEEEecC
Confidence 344555666899999998 54 455566554 4677776654
No 197
>3n53_A Response regulator receiver modulated diguanylate; diguanylate cyclase, protein structure I II(PSI II), NYSGXRC, structural genomics; 2.20A {Pelobacter carbinolicus} SCOP: c.23.1.0
Probab=26.88 E-value=67 Score=23.84 Aligned_cols=41 Identities=17% Similarity=0.259 Sum_probs=23.9
Q ss_pred HHHHHHHhhcCCCEEEECC-CCC--hHHHHHH-------hCCCeEEEeCch
Q 017557 9 PAIEAIVRDIKPNIVFFDF-TYW--LPSLARK-------LGIKSIAFVTVS 49 (369)
Q Consensus 9 ~~l~~~l~~~~pD~vI~D~-~~~--~~~~A~~-------lgiP~v~~~~~~ 49 (369)
....+.+++.+||+||.|. .+- +..+++. -++|.+.++...
T Consensus 36 ~~a~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~ 86 (140)
T 3n53_A 36 KEALEQIDHHHPDLVILDMDIIGENSPNLCLKLKRSKGLKNVPLILLFSSE 86 (140)
T ss_dssp HHHHHHHHHHCCSEEEEETTC------CHHHHHHTSTTCTTCCEEEEECC-
T ss_pred HHHHHHHhcCCCCEEEEeCCCCCCcHHHHHHHHHcCcccCCCCEEEEecCC
Confidence 3445566667899999998 442 3333332 367888776543
No 198
>3c3f_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-alpha-beta) backbone...; helix bundle, foldamer, unknown function, de novo protein; HET: B3K B3D B3E BIL B3L BAL; 2.00A {Synthetic} SCOP: h.1.3.1
Probab=26.80 E-value=92 Score=17.75 Aligned_cols=28 Identities=7% Similarity=0.158 Sum_probs=22.6
Q ss_pred HHHHHHHHHhccCCcchHHHHHHHHHHHHHHh
Q 017557 315 GVCKAVKAVMDDDSEVGKDARQNHAELREFLI 346 (369)
Q Consensus 315 ~l~~ai~~ll~~~~~~~~~~~~~a~~l~~~~~ 346 (369)
+|.+.++++|.. +..+...+.++++.+.
T Consensus 5 QLEdKVEeLl~~----~~~Le~EV~RLk~ll~ 32 (34)
T 3c3f_A 5 QIEXKLEXILSX----LYHXENEXARIXKLLX 32 (34)
T ss_dssp HHHHHHHHHHHH----HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhh----hhHHHHHHHHHHHHHh
Confidence 678889999973 6778888888888775
No 199
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=26.77 E-value=77 Score=23.16 Aligned_cols=38 Identities=21% Similarity=0.114 Sum_probs=24.1
Q ss_pred HHHHHhhcCCCEEEECC-CC--ChHHHHHHh-----CCCeEEEeCc
Q 017557 11 IEAIVRDIKPNIVFFDF-TY--WLPSLARKL-----GIKSIAFVTV 48 (369)
Q Consensus 11 l~~~l~~~~pD~vI~D~-~~--~~~~~A~~l-----giP~v~~~~~ 48 (369)
..+.+++.+||+||.|. .+ -+..+.+.+ ++|.+.++..
T Consensus 38 a~~~~~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 83 (134)
T 3f6c_A 38 AVQRVETLKPDIVIIDVDIPGVNGIQVLETLRKRQYSGIIIIVSAK 83 (134)
T ss_dssp HHHHHHHHCCSEEEEETTCSSSCHHHHHHHHHHTTCCSEEEEEECC
T ss_pred HHHHHHhcCCCEEEEecCCCCCChHHHHHHHHhcCCCCeEEEEeCC
Confidence 34455666899999998 44 355555543 4777666543
No 200
>2qv0_A Protein MRKE; structural genomics, transcription, PSI-2, protein structure initiative; 2.40A {Klebsiella pneumoniae}
Probab=26.57 E-value=1.2e+02 Score=22.34 Aligned_cols=30 Identities=17% Similarity=0.159 Sum_probs=20.8
Q ss_pred HHHHHHHhhcCCCEEEECC-CC--ChHHHHHHh
Q 017557 9 PAIEAIVRDIKPNIVFFDF-TY--WLPSLARKL 38 (369)
Q Consensus 9 ~~l~~~l~~~~pD~vI~D~-~~--~~~~~A~~l 38 (369)
....+.+++.+||+||.|. .+ -+..+++.+
T Consensus 45 ~~al~~l~~~~~dlvi~d~~l~~~~g~~~~~~l 77 (143)
T 2qv0_A 45 LDVLKFLQHNKVDAIFLDINIPSLDGVLLAQNI 77 (143)
T ss_dssp HHHHHHHHHCCCSEEEECSSCSSSCHHHHHHHH
T ss_pred HHHHHHHHhCCCCEEEEecCCCCCCHHHHHHHH
Confidence 3445566667899999998 44 456666665
No 201
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=26.49 E-value=57 Score=32.67 Aligned_cols=48 Identities=13% Similarity=0.168 Sum_probs=34.4
Q ss_pred hcHHHHHHHHhhcCCCEEEECC--CCChHHHHHHhCCCeEEEeCchHHHHH
Q 017557 6 LTEPAIEAIVRDIKPNIVFFDF--TYWLPSLARKLGIKSIAFVTVSPATVG 54 (369)
Q Consensus 6 ~~~~~l~~~l~~~~pD~vI~D~--~~~~~~~A~~lgiP~v~~~~~~~~~~~ 54 (369)
.....+++++ +.+|++|+.|. .+.+...|+++++|.+.+..-.+-..+
T Consensus 344 ~~~~~~~~l~-~~~p~~i~~D~HP~y~st~~a~~~~~~~~~vQHHhAH~~a 393 (657)
T 3ttc_A 344 EALRLMQNIY-NFTPQYVVHDAHPGYVSCQWASEMNLPTQTVLHHHAHAAA 393 (657)
T ss_dssp HHHHHHHHHT-TCCCSEEEEESCTTCHHHHHHTTSCSCEEEECHHHHHHHH
T ss_pred HHHHHHHHHh-CCCCCEEEEcCCCCchHHHHHHHcCCCeEEeeHHHHHHHH
Confidence 3334444444 24899999998 777778999999999998776655443
No 202
>4a1f_A DNAB helicase, replicative DNA helicase; hydrolase, DNA replication, ATPase; HET: FLC; 2.50A {Helicobacter pylori}
Probab=26.39 E-value=59 Score=29.54 Aligned_cols=44 Identities=25% Similarity=0.324 Sum_probs=30.3
Q ss_pred hcHHHHHHHHhhc-CCCEEEECC--CCCh------------------HHHHHHhCCCeEEEeCch
Q 017557 6 LTEPAIEAIVRDI-KPNIVFFDF--TYWL------------------PSLARKLGIKSIAFVTVS 49 (369)
Q Consensus 6 ~~~~~l~~~l~~~-~pD~vI~D~--~~~~------------------~~~A~~lgiP~v~~~~~~ 49 (369)
.+...++.+.++. ++++||+|. .... ..+|+.+|||+++++-..
T Consensus 142 ~i~~~ir~l~~~~gg~~lIVIDyLqlm~~~~~~~~r~~ei~~isr~LK~lAkel~vpVi~lsQl~ 206 (338)
T 4a1f_A 142 QIRLQLRKLKSQHKELGIAFIDYLQLMSGSKATKERHEQIAEISRELKTLARELEIPIIALVQLN 206 (338)
T ss_dssp HHHHHHHHHHHHCTTEEEEEEEEEECCCTHHHHHHCCCCHHHHHHHHHHHHHHHTSCEEEEEECC
T ss_pred HHHHHHHHHHHhcCCCCEEEEechHHhcCCCCCCChHHHHHHHHHHHHHHHHHcCCeEEEEEecC
Confidence 3444555555555 799999997 3222 347899999999987544
No 203
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=26.35 E-value=2.3e+02 Score=23.75 Aligned_cols=44 Identities=11% Similarity=0.145 Sum_probs=27.9
Q ss_pred eeEecccChHH--hhcCCCccceeecCCCchHHHHH---------HhCCccccccc
Q 017557 237 FVHGGWVQQQL--ILKHPSVGCFVTHCGSGSLSEAM---------VNECQLVLLPN 281 (369)
Q Consensus 237 ~~v~~~~pq~~--lL~~~~~~~~ItHgG~~s~~Eal---------~~GvP~i~~P~ 281 (369)
+.+....+... +...++. .++--||.||+-|.. .+++|++.+-.
T Consensus 89 ~~~~~~~~~Rk~~~~~~sda-~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 143 (216)
T 1ydh_A 89 VRVVADMHERKAAMAQEAEA-FIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNV 143 (216)
T ss_dssp EEEESSHHHHHHHHHHHCSE-EEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEECG
T ss_pred ccccCCHHHHHHHHHHhCCE-EEEeCCCccHHHHHHHHHHHHHhcccCCCEEEecC
Confidence 44444444432 3444543 466778889988776 47999998864
No 204
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=26.34 E-value=1.1e+02 Score=22.46 Aligned_cols=41 Identities=20% Similarity=0.285 Sum_probs=26.3
Q ss_pred HHHHHHHhhcCCCEEEECC-CC--ChHHHHHHh-------CCCeEEEeCch
Q 017557 9 PAIEAIVRDIKPNIVFFDF-TY--WLPSLARKL-------GIKSIAFVTVS 49 (369)
Q Consensus 9 ~~l~~~l~~~~pD~vI~D~-~~--~~~~~A~~l-------giP~v~~~~~~ 49 (369)
....+.+++.+||+||.|. .+ -+..+++.+ ++|.+.++...
T Consensus 44 ~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~ 94 (143)
T 3cnb_A 44 FDAGDLLHTVKPDVVMLDLMMVGMDGFSICHRIKSTPATANIIVIAMTGAL 94 (143)
T ss_dssp HHHHHHHHHTCCSEEEEETTCTTSCHHHHHHHHHTSTTTTTSEEEEEESSC
T ss_pred HHHHHHHHhcCCCEEEEecccCCCcHHHHHHHHHhCccccCCcEEEEeCCC
Confidence 3455566677899999998 44 344544443 46777776543
No 205
>1uo4_A General control protein GCN4; four helix bundle, cavity, iodobenzene; 1.70A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1uo3_A 1unt_A 1uo5_A 1unu_A 1unv_A 1uo1_A 2ccf_A 2cce_A 1unx_A 1unw_A 1w5j_A* 1w5k_A* 1u9f_A* 3f86_A* 3f87_A* 3hez_A* 3c3f_A*
Probab=26.21 E-value=96 Score=17.72 Aligned_cols=29 Identities=7% Similarity=0.099 Sum_probs=23.1
Q ss_pred HHHHHHHHHhccCCcchHHHHHHHHHHHHHHhc
Q 017557 315 GVCKAVKAVMDDDSEVGKDARQNHAELREFLIS 347 (369)
Q Consensus 315 ~l~~ai~~ll~~~~~~~~~~~~~a~~l~~~~~~ 347 (369)
+|.+.+++++.. +..+...+.++++.+.+
T Consensus 5 QLEdKVEeLl~~----n~~Le~EV~RLk~LL~~ 33 (34)
T 1uo4_A 5 QIEDKGEEILSK----LYHIENELARIKKLLGE 33 (34)
T ss_dssp HHHHHHHHHHHH----HHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHh----hHHHHHHHHHHHHHHcc
Confidence 678888899873 77888889998887753
No 206
>1mvo_A PHOP response regulator; phosphate regulon, transcriptional regulatory protein, alpha/beta doubly wound fold, phosphorylation; 1.60A {Bacillus subtilis} SCOP: c.23.1.1
Probab=26.01 E-value=1.2e+02 Score=22.01 Aligned_cols=38 Identities=11% Similarity=0.102 Sum_probs=24.1
Q ss_pred HHHHHHhhcCCCEEEECC-CC--ChHHHHHHh-----CCCeEEEeC
Q 017557 10 AIEAIVRDIKPNIVFFDF-TY--WLPSLARKL-----GIKSIAFVT 47 (369)
Q Consensus 10 ~l~~~l~~~~pD~vI~D~-~~--~~~~~A~~l-----giP~v~~~~ 47 (369)
...+.++..+||+||.|. .+ -+..+++.+ .+|.+.++.
T Consensus 38 ~a~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~ 83 (136)
T 1mvo_A 38 EALKKAETEKPDLIVLDVMLPKLDGIEVCKQLRQQKLMFPILMLTA 83 (136)
T ss_dssp HHHHHHHHHCCSEEEEESSCSSSCHHHHHHHHHHTTCCCCEEEEEC
T ss_pred HHHHHHhhcCCCEEEEecCCCCCCHHHHHHHHHcCCCCCCEEEEEC
Confidence 344455566899999998 54 355555443 467777654
No 207
>2dvt_A Thermophilic reversible gamma-resorcylate decarbo; TIM barrel, lyase; 1.70A {Rhizobium SP} SCOP: c.1.9.15 PDB: 2dvu_A* 2dvx_A* 3s4t_A*
Probab=25.94 E-value=3.2e+02 Score=23.62 Aligned_cols=69 Identities=12% Similarity=0.183 Sum_probs=40.0
Q ss_pred hhcCcceeEeCCCCCCCCCCCchhHHHhhhccCCCCceEEEeeCCCc---------cCCHHHHHHHHHHHHhcCCcEEEE
Q 017557 140 SQFEKRVILAGPVLPEPPASVLEEEFEMLFSSFKAKSLIFCALGSEC---------VLKKDQFQELILGFELTGLPFFAA 210 (369)
Q Consensus 140 ~~~~~~~~~vGp~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~---------~~~~~~~~~~~~~l~~~~~~~i~~ 210 (369)
...|.+++.++.+.+..++ ...+++.++++..+ ++-|-+|... ......+..+++.+++.+.++++=
T Consensus 89 ~~~p~r~~~~~~v~p~~~~-~~~~el~~~~~~~g---~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~lpv~iH 164 (327)
T 2dvt_A 89 AKRPDRFLAFAALPLQDPD-AATEELQRCVNDLG---FVGALVNGFSQEGDGQTPLYYDLPQYRPFWGEVEKLDVPFYLH 164 (327)
T ss_dssp HHCTTTEEEEECCCTTSHH-HHHHHHHHHHHTTC---CCEEEEESSBCCTTCCSCBCTTSGGGHHHHHHHHHHTCCEEEE
T ss_pred hhCCCceEEEeecCcCCHH-HHHHHHHHHHhcCC---ceEEEECCCCCCCcccCCCCCCCcchHHHHHHHHHcCCeEEEC
Confidence 3456667777766654221 12356777765433 3333344332 234566888888888889987766
Q ss_pred EC
Q 017557 211 LK 212 (369)
Q Consensus 211 ~~ 212 (369)
.+
T Consensus 165 ~~ 166 (327)
T 2dvt_A 165 PR 166 (327)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 208
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=25.49 E-value=2.1e+02 Score=25.90 Aligned_cols=63 Identities=14% Similarity=0.180 Sum_probs=40.9
Q ss_pred CceEEEeeCCCccCCHHHHHHHHHHHHhcCCcEEEEECCCCCCCccccCCchhHHHHhcCCCeeEeccc-ChHHhhcCCC
Q 017557 175 KSLIFCALGSECVLKKDQFQELILGFELTGLPFFAALKPPTGHDTIESALPEGFEERVKGRGFVHGGWV-QQQLILKHPS 253 (369)
Q Consensus 175 ~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~-pq~~lL~~~~ 253 (369)
+.+-.|.+|.++ ..+++.+...|.+++..-+.. .+.... .++ .++ ...++++.++
T Consensus 174 ktvGIIGlG~IG-------~~vA~~l~~~G~~V~~~dr~~---------~~~~~~-----~g~---~~~~~l~ell~~sD 229 (345)
T 4g2n_A 174 RRLGIFGMGRIG-------RAIATRARGFGLAIHYHNRTR---------LSHALE-----EGA---IYHDTLDSLLGASD 229 (345)
T ss_dssp CEEEEESCSHHH-------HHHHHHHHTTTCEEEEECSSC---------CCHHHH-----TTC---EECSSHHHHHHTCS
T ss_pred CEEEEEEeChhH-------HHHHHHHHHCCCEEEEECCCC---------cchhhh-----cCC---eEeCCHHHHHhhCC
Confidence 558899999998 778888887888866542221 111111 022 234 5678999999
Q ss_pred ccceeecCCC
Q 017557 254 VGCFVTHCGS 263 (369)
Q Consensus 254 ~~~~ItHgG~ 263 (369)
+ ++.|+-.
T Consensus 230 v--V~l~~Pl 237 (345)
T 4g2n_A 230 I--FLIAAPG 237 (345)
T ss_dssp E--EEECSCC
T ss_pred E--EEEecCC
Confidence 8 8888754
No 209
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=25.47 E-value=73 Score=29.50 Aligned_cols=62 Identities=15% Similarity=0.202 Sum_probs=39.8
Q ss_pred CceEEEeeCCCccCCHHHHHHHHHHHHhcCCcEEEEECCCCCCCccccCCchhHHHHhcCCCeeEecccChHHhhcCCCc
Q 017557 175 KSLIFCALGSECVLKKDQFQELILGFELTGLPFFAALKPPTGHDTIESALPEGFEERVKGRGFVHGGWVQQQLILKHPSV 254 (369)
Q Consensus 175 ~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~~ 254 (369)
+.+-.|.+|.++ ..+++.+...|.+++..-... +.. . ....+.+..++++.+++
T Consensus 120 ktvGIIGlG~IG-------~~vA~~l~a~G~~V~~~d~~~---------------~~~---~-~~~~~~sl~ell~~aDi 173 (381)
T 3oet_A 120 RTIGIVGVGNVG-------SRLQTRLEALGIRTLLCDPPR---------------AAR---G-DEGDFRTLDELVQEADV 173 (381)
T ss_dssp CEEEEECCSHHH-------HHHHHHHHHTTCEEEEECHHH---------------HHT---T-CCSCBCCHHHHHHHCSE
T ss_pred CEEEEEeECHHH-------HHHHHHHHHCCCEEEEECCCh---------------HHh---c-cCcccCCHHHHHhhCCE
Confidence 457888999888 667777777788765542110 000 0 01245677789999999
Q ss_pred cceeecCCCc
Q 017557 255 GCFVTHCGSG 264 (369)
Q Consensus 255 ~~~ItHgG~~ 264 (369)
++.|.-.+
T Consensus 174 --V~l~~Plt 181 (381)
T 3oet_A 174 --LTFHTPLY 181 (381)
T ss_dssp --EEECCCCC
T ss_pred --EEEcCcCC
Confidence 99888644
No 210
>1zl0_A Hypothetical protein PA5198; structural genomics, PSI, PROT structure initiative, midwest center for structural genomic unknown function; HET: TLA PEG; 1.10A {Pseudomonas aeruginosa} SCOP: c.8.10.1 c.23.16.7 PDB: 1zrs_A 2aum_A 2aun_A
Probab=25.40 E-value=97 Score=27.76 Aligned_cols=74 Identities=11% Similarity=0.060 Sum_probs=51.7
Q ss_pred CCHHHHHHHHHHHHhcCCcEEEEECCCCCCCccccCCchhHHHHhcCCCeeEecccChHHhhc-CCCccceeecCCCchH
Q 017557 188 LKKDQFQELILGFELTGLPFFAALKPPTGHDTIESALPEGFEERVKGRGFVHGGWVQQQLILK-HPSVGCFVTHCGSGSL 266 (369)
Q Consensus 188 ~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~-~~~~~~~ItHgG~~s~ 266 (369)
.+.++.+.+.+++...+.+.||.++.+.. -.++.++++...+-+ +|+. ||=+...+++
T Consensus 64 td~~Ra~dL~~a~~Dp~i~aI~~~rGGyg-------------------a~rlLp~LD~~~i~~a~PK~--~iGySDiTaL 122 (311)
T 1zl0_A 64 TVEQRLEDLHNAFDMPDITAVWCLRGGYG-------------------CGQLLPGLDWGRLQAASPRP--LIGFSDISVL 122 (311)
T ss_dssp CHHHHHHHHHHHHHSTTEEEEEESCCSSC-------------------GGGGTTTCCHHHHHHSCCCC--EEECGGGHHH
T ss_pred CHHHHHHHHHHHHhCCCCCEEEEccCCcC-------------------HHHHhhccchhhhhccCCCE--EEEEchhHHH
Confidence 34577888999999999999999876532 112334555555555 7777 8888888888
Q ss_pred HHHHH-hCCcccccccc
Q 017557 267 SEAMV-NECQLVLLPNV 282 (369)
Q Consensus 267 ~Eal~-~GvP~i~~P~~ 282 (369)
+-+++ .|++.+.=|..
T Consensus 123 ~~al~~~G~~t~hGp~~ 139 (311)
T 1zl0_A 123 LSAFHRHGLPAIHGPVA 139 (311)
T ss_dssp HHHHHHTTCCEEECCCG
T ss_pred HHHHHHcCCcEEECHhh
Confidence 88887 37776666653
No 211
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=25.14 E-value=79 Score=26.35 Aligned_cols=46 Identities=17% Similarity=0.076 Sum_probs=30.5
Q ss_pred HHhhhccCCCCceEEEeeCCCccCCHHHHHHHHHHHHhcCCcEEEE
Q 017557 165 FEMLFSSFKAKSLIFCALGSECVLKKDQFQELILGFELTGLPFFAA 210 (369)
Q Consensus 165 ~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~ 210 (369)
+.+|+.....+.++||-.+|......+.+..+.++|+..|..+.+.
T Consensus 18 ~~~f~~~~~~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~~ 63 (206)
T 3l4e_A 18 FTEFESNLQGKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEEL 63 (206)
T ss_dssp HHHHSCCCTTCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHcCCCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEEE
Confidence 3445533334568899888765444566788888998888875544
No 212
>1zh2_A KDP operon transcriptional regulatory protein KDPE; two-component system, gene regulation, transcription factor, KDP potassium transport system; 2.00A {Escherichia coli} SCOP: c.23.1.1 PDB: 1zh4_A
Probab=25.08 E-value=1e+02 Score=21.83 Aligned_cols=37 Identities=19% Similarity=0.215 Sum_probs=24.2
Q ss_pred HHHhhcCCCEEEECC-CC--ChHHHHHHh----CCCeEEEeCch
Q 017557 13 AIVRDIKPNIVFFDF-TY--WLPSLARKL----GIKSIAFVTVS 49 (369)
Q Consensus 13 ~~l~~~~pD~vI~D~-~~--~~~~~A~~l----giP~v~~~~~~ 49 (369)
..+.+.+||++|.|. .+ -+..+++.+ .+|.+.++...
T Consensus 39 ~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~ 82 (121)
T 1zh2_A 39 LEAATRKPDLIILDLGLPDGDGIEFIRDLRQWSAVPVIVLSARS 82 (121)
T ss_dssp HHHHHHCCSEEEEESEETTEEHHHHHHHHHTTCCCCEEEEESCC
T ss_pred HHHhcCCCCEEEEeCCCCCCcHHHHHHHHHhCCCCcEEEEECCC
Confidence 344455899999998 54 355555554 57777776543
No 213
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=25.06 E-value=1.6e+02 Score=21.25 Aligned_cols=32 Identities=16% Similarity=0.159 Sum_probs=21.7
Q ss_pred cCCCEEEECC-CC--ChHHHHHHh-------CCCeEEEeCch
Q 017557 18 IKPNIVFFDF-TY--WLPSLARKL-------GIKSIAFVTVS 49 (369)
Q Consensus 18 ~~pD~vI~D~-~~--~~~~~A~~l-------giP~v~~~~~~ 49 (369)
.+||+||.|. .+ -+..+++.+ ++|.+.++...
T Consensus 50 ~~~dlvi~D~~~p~~~g~~~~~~lr~~~~~~~~pii~~s~~~ 91 (129)
T 3h1g_A 50 ADTKVLITDWNMPEMNGLDLVKKVRSDSRFKEIPIIMITAEG 91 (129)
T ss_dssp TTCCEEEECSCCSSSCHHHHHHHHHTSTTCTTCCEEEEESCC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCCeEEEEeCCC
Confidence 3799999998 54 355666543 47888876543
No 214
>3psh_A Protein HI_1472; substrate binding protein, periplasmic binding protein, MOLY binding protein, metal transport; 1.50A {Haemophilus influenzae} PDB: 3psa_A
Probab=24.90 E-value=53 Score=29.20 Aligned_cols=37 Identities=22% Similarity=0.355 Sum_probs=24.1
Q ss_pred HHHHHHhhcCCCEEEECC-CC-ChHHHHHHhCCCeEEEeC
Q 017557 10 AIEAIVRDIKPNIVFFDF-TY-WLPSLARKLGIKSIAFVT 47 (369)
Q Consensus 10 ~l~~~l~~~~pD~vI~D~-~~-~~~~~A~~lgiP~v~~~~ 47 (369)
.++.++ +.+||+||... .. -...--+++|||++.+..
T Consensus 76 n~E~i~-~l~PDlIi~~~~~~~~~~~~L~~~Gipvv~~~~ 114 (326)
T 3psh_A 76 NIESLL-ALKPDVVFVTNYAPSEMIKQISDVNIPVVAISL 114 (326)
T ss_dssp CHHHHH-HTCCSEEEEETTCCHHHHHHHHTTTCCEEEECS
T ss_pred CHHHHH-ccCCCEEEEeCCCChHHHHHHHHcCCCEEEEec
Confidence 344444 57899999876 32 223334567999999754
No 215
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=24.87 E-value=2.9e+02 Score=22.71 Aligned_cols=97 Identities=13% Similarity=0.084 Sum_probs=53.2
Q ss_pred hhHHHhhhccCCCCceEEEeeCCCccCCHHHHHHHHHHHHhcCCcEEEEECCCCCCCccccCCchhHHHHhcCCCeeEe-
Q 017557 162 EEEFEMLFSSFKAKSLIFCALGSECVLKKDQFQELILGFELTGLPFFAALKPPTGHDTIESALPEGFEERVKGRGFVHG- 240 (369)
Q Consensus 162 ~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~- 240 (369)
..++-++|.+.+ ..+|+.|..+ .+.+..++..+.+-++|-++..... .. .+ ..+.+.
T Consensus 47 A~~lg~~LA~~G---~~vVsGg~~G-----iM~aa~~gAl~~GG~~iGVlP~e~~----~~----~~------~~~~~~~ 104 (195)
T 1rcu_A 47 CLELGRTLAKKG---YLVFNGGRDG-----VMELVSQGVREAGGTVVGILPDEEA----GN----PY------LSVAVKT 104 (195)
T ss_dssp HHHHHHHHHHTT---CEEEECCSSH-----HHHHHHHHHHHTTCCEEEEESTTCC----CC----TT------CSEEEEC
T ss_pred HHHHHHHHHHCC---CEEEeCCHHH-----HHHHHHHHHHHcCCcEEEEeCCccc----CC----CC------cceeeec
Confidence 456777787643 6666755444 3344555544455566666643211 01 11 122222
Q ss_pred -cccCh-HH-hhcCCCccceeecCCCchHHH---HHHhCCccccccc
Q 017557 241 -GWVQQ-QL-ILKHPSVGCFVTHCGSGSLSE---AMVNECQLVLLPN 281 (369)
Q Consensus 241 -~~~pq-~~-lL~~~~~~~~ItHgG~~s~~E---al~~GvP~i~~P~ 281 (369)
...++ .. +...++. .++--||.||+.| ++.+|+|++.++.
T Consensus 105 ~~~f~~Rk~~m~~~sda-~IvlpGG~GTL~E~~eal~~~kPV~lln~ 150 (195)
T 1rcu_A 105 GLDFQMRSFVLLRNADV-VVSIGGEIGTAIEILGAYALGKPVILLRG 150 (195)
T ss_dssp CCCHHHHHHHHHTTCSE-EEEESCCHHHHHHHHHHHHTTCCEEEETT
T ss_pred CCCHHHHHHHHHHhCCE-EEEecCCCcHHHHHHHHHhcCCCEEEECC
Confidence 23343 23 3444443 4666788888765 5779999999973
No 216
>3m3h_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, structural genomics, infectious diseases; 1.75A {Bacillus anthracis} PDB: 3osc_A*
Probab=24.77 E-value=66 Score=27.55 Aligned_cols=40 Identities=3% Similarity=0.070 Sum_probs=27.7
Q ss_pred hcHHHHHHHHhhc--CCCEEEEC-C--CCChHHHHHHhCCCeEEE
Q 017557 6 LTEPAIEAIVRDI--KPNIVFFD-F--TYWLPSLARKLGIKSIAF 45 (369)
Q Consensus 6 ~~~~~l~~~l~~~--~pD~vI~D-~--~~~~~~~A~~lgiP~v~~ 45 (369)
.+...+.+.+++. .+|+|+.= . .+.+..+|+.+|+|++..
T Consensus 73 ~l~~~la~~i~~~~~~~D~Ivg~~~gGi~~a~~lA~~L~~p~~~v 117 (234)
T 3m3h_A 73 TIAAGLEELIKEHFPTVEVIAGTATAGIAHAAWVSDRMDLPMCYV 117 (234)
T ss_dssp HHHHHHHHHHHHHCTTCCEEEEC---CHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHHhCCCCCEEEEeccchHHHHHHHHHHcCCCEEEE
Confidence 3444555555554 78988743 3 567899999999998754
No 217
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=24.76 E-value=1.4e+02 Score=21.96 Aligned_cols=39 Identities=13% Similarity=0.034 Sum_probs=24.8
Q ss_pred HHHHHHhh-cCCCEEEECC-CC---ChHHHHHH----hCCCeEEEeCc
Q 017557 10 AIEAIVRD-IKPNIVFFDF-TY---WLPSLARK----LGIKSIAFVTV 48 (369)
Q Consensus 10 ~l~~~l~~-~~pD~vI~D~-~~---~~~~~A~~----lgiP~v~~~~~ 48 (369)
...+.+++ .+||+||.|. .+ -+..+++. -++|.+.++..
T Consensus 40 ~a~~~l~~~~~~dlvi~D~~l~~~~~g~~~~~~l~~~~~~~ii~ls~~ 87 (140)
T 3h5i_A 40 AAVEKVSGGWYPDLILMDIELGEGMDGVQTALAIQQISELPVVFLTAH 87 (140)
T ss_dssp HHHHHHHTTCCCSEEEEESSCSSSCCHHHHHHHHHHHCCCCEEEEESS
T ss_pred HHHHHHhcCCCCCEEEEeccCCCCCCHHHHHHHHHhCCCCCEEEEECC
Confidence 34445555 6899999998 53 34445444 36887776643
No 218
>2oqr_A Sensory transduction protein REGX3; response regulator, winged-helix-turn-helix, DNA-binding, 3D swapping, two component system; 2.03A {Mycobacterium tuberculosis H37RV}
Probab=24.69 E-value=1.1e+02 Score=24.93 Aligned_cols=41 Identities=17% Similarity=0.169 Sum_probs=27.7
Q ss_pred HHHHHHhhcCCCEEEECC-CC--ChHHHHHHh----CCCeEEEeCchH
Q 017557 10 AIEAIVRDIKPNIVFFDF-TY--WLPSLARKL----GIKSIAFVTVSP 50 (369)
Q Consensus 10 ~l~~~l~~~~pD~vI~D~-~~--~~~~~A~~l----giP~v~~~~~~~ 50 (369)
...+.+++.+||+||.|. .+ -+..+++.+ ++|.+.++....
T Consensus 39 ~al~~~~~~~~dlvllD~~l~~~~g~~~~~~l~~~~~~~ii~lt~~~~ 86 (230)
T 2oqr_A 39 AALAEFDRAGADIVLLDLMLPGMSGTDVCKQLRARSSVPVIMVTARDS 86 (230)
T ss_dssp HHHHHHHHHCCSEEEEESSCSSSCHHHHHHHHHHHCSCSEEEEECCHH
T ss_pred HHHHHHhccCCCEEEEECCCCCCCHHHHHHHHHcCCCCCEEEEeCCCc
Confidence 344555666899999998 54 345555443 789988876543
No 219
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=24.65 E-value=81 Score=32.19 Aligned_cols=49 Identities=16% Similarity=0.240 Sum_probs=34.7
Q ss_pred hhcHHHHHHHHhhcCCCEEEECC--CCChHHHHHHhCCCeEEEeCchHHHHH
Q 017557 5 DLTEPAIEAIVRDIKPNIVFFDF--TYWLPSLARKLGIKSIAFVTVSPATVG 54 (369)
Q Consensus 5 ~~~~~~l~~~l~~~~pD~vI~D~--~~~~~~~A~~lgiP~v~~~~~~~~~~~ 54 (369)
+.....++++++ .+|++|+.|. .+.+...|+.+++|.+.+..-.+-..+
T Consensus 440 ~~~~~~~~~l~~-~~p~~i~~D~HP~y~st~~a~~~~~p~~~VQHHhAH~as 490 (761)
T 3vth_A 440 IEQIERYKKLFR-VDPEVVAHDMHKGYLSTQYAKSLDLPKIEVQHHHAHIAS 490 (761)
T ss_dssp HHHHHHHHHHTT-CCCSEEEEESCTTSHHHHHHHHSSSCEEEECHHHHHHHH
T ss_pred HHHHHHHHHHhC-CCCCEEEEeCCCCchHHHHHHhcCCCeEEecHHHHHHHH
Confidence 333444444442 4899999998 777788999999999988766555433
No 220
>2dy0_A APRT, adenine phosphoribosyltransferase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.25A {Escherichia coli K12}
Probab=24.56 E-value=64 Score=26.34 Aligned_cols=38 Identities=11% Similarity=0.060 Sum_probs=24.5
Q ss_pred cHHHHHHHHhhcCCCEEE-ECC--CCChHHHHHHhCCCeEE
Q 017557 7 TEPAIEAIVRDIKPNIVF-FDF--TYWLPSLARKLGIKSIA 44 (369)
Q Consensus 7 ~~~~l~~~l~~~~pD~vI-~D~--~~~~~~~A~~lgiP~v~ 44 (369)
+...+.+.+++.++|+|| .+. ...+..+|+.+|+|++.
T Consensus 51 l~~~la~~~~~~~~d~Iv~v~~rG~~~a~~la~~l~~p~~~ 91 (190)
T 2dy0_A 51 SIDLLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVP 91 (190)
T ss_dssp HHHHHHHHHTTTTCCEEEEETTHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHhccCCCCEEEEECcccHHHHHHHHHHHCCCEEE
Confidence 334444444444678877 444 56788889999998643
No 221
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=24.41 E-value=83 Score=28.52 Aligned_cols=72 Identities=7% Similarity=0.037 Sum_probs=50.9
Q ss_pred CHHHHHHHHHHHHhcCCcEEEEECCCCCCCccccCCchhHHHHhcCCCeeEecccChHHhhcCCCccceeecCCCchHHH
Q 017557 189 KKDQFQELILGFELTGLPFFAALKPPTGHDTIESALPEGFEERVKGRGFVHGGWVQQQLILKHPSVGCFVTHCGSGSLSE 268 (369)
Q Consensus 189 ~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~~~~~ItHgG~~s~~E 268 (369)
+.++...+.+++...+.+.||.++.+.. -.++.++++...+-++|+. ||-+...++++-
T Consensus 64 d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g-------------------~~rlL~~lD~~~i~~~PK~--~~GySDiTaL~~ 122 (336)
T 3sr3_A 64 IQERAKELNALIRNPNVSCIMSTIGGMN-------------------SNSLLPYIDYDAFQNNPKI--MIGYSDATALLL 122 (336)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESCCCSC-------------------GGGGGGGSCHHHHHHSCCE--EEECGGGHHHHH
T ss_pred HHHHHHHHHHHhhCCCCCEEEEcccccc-------------------HHHHhhhcChhHHhhCCeE--EEEechHHHHHH
Confidence 3567888999999889999999876532 1123345555556567777 888888877888
Q ss_pred HHH--hCCccccccc
Q 017557 269 AMV--NECQLVLLPN 281 (369)
Q Consensus 269 al~--~GvP~i~~P~ 281 (369)
+++ .|+..+.=|.
T Consensus 123 al~~~~G~~t~hGp~ 137 (336)
T 3sr3_A 123 GIYAKTGIPTFYGPA 137 (336)
T ss_dssp HHHHHHCCCEEECCC
T ss_pred HHHHhcCceEEECCh
Confidence 777 4777766665
No 222
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*
Probab=24.38 E-value=63 Score=30.21 Aligned_cols=46 Identities=9% Similarity=0.028 Sum_probs=34.1
Q ss_pred HHhhhccCCCCceEEEeeCCCccCCHHHHHHHHHHHHhcCCcEEEE
Q 017557 165 FEMLFSSFKAKSLIFCALGSECVLKKDQFQELILGFELTGLPFFAA 210 (369)
Q Consensus 165 ~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~ 210 (369)
-.+|-...+.+.-|.|.++|+...+....+++++++.+.|.+.+..
T Consensus 255 Y~~w~~~~~~~~~v~I~Y~S~yGnTe~mA~~ia~gl~~~Gv~~~~~ 300 (410)
T 4dik_A 255 YVSVAKGDPKKGKVTVIYDSMYGFVENVMKKAIDSLKEKGFTPVVY 300 (410)
T ss_dssp HHHHHHTCCCTTEEEEEEECSSSHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHhhcccccccceeeEEecccChHHHHHHHHHHHHHhcCCceEEE
Confidence 4456654444556778899998777777888999999999886653
No 223
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=24.15 E-value=1.3e+02 Score=25.11 Aligned_cols=114 Identities=11% Similarity=0.032 Sum_probs=63.8
Q ss_pred HHHHHHHHhcCCcEEEEECCCCCCCccccCCchhHHHHhcCCCeeEecccChHHhhcCCCccceeecCCCchHHHHHHhC
Q 017557 194 QELILGFELTGLPFFAALKPPTGHDTIESALPEGFEERVKGRGFVHGGWVQQQLILKHPSVGCFVTHCGSGSLSEAMVNE 273 (369)
Q Consensus 194 ~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~~~~~ItHgG~~s~~Eal~~G 273 (369)
.++++.++..+..+++..+.. .-+|+.+.+..+.+-+-+ |+++ .=..-|++.+..|+.+|
T Consensus 70 ~~~~~~l~~~~~Dliv~a~y~-------~il~~~~l~~~~~~~iNi-----------HpSL--LP~yrG~~pi~~ai~~G 129 (216)
T 2ywr_A 70 ERMALELKKKGVELVVLAGFM-------RILSHNFLKYFPNKVINI-----------HPSL--IPAFQGLHAQKQAVEFG 129 (216)
T ss_dssp HHHHHHHHHTTCCEEEESSCC-------SCCCHHHHTTSTTCEEEE-----------ESSC--TTTTCSTTHHHHHHHHT
T ss_pred HHHHHHHHhcCCCEEEEeCch-------hhCCHHHHhhccCCeEEE-----------cCCc--CcCCCCccHHHHHHHcC
Confidence 346777777777888877643 456665554332222222 3333 33345888999999999
Q ss_pred Cccccccccc--chhHHHHHHhhhcceEEEEeecCCCCccCHHHHHHHHHHHhccCCcchHHHHHHHHHH
Q 017557 274 CQLVLLPNVG--DQIINSRLMGEDLKVGVEVERGDEDGLFTRDGVCKAVKAVMDDDSEVGKDARQNHAEL 341 (369)
Q Consensus 274 vP~i~~P~~~--DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~a~~l 341 (369)
....++-.+. +..+.+.-+.+. -+.+..+ -|.++|.+.+.++- .+-|.+..+.+
T Consensus 130 ~~~tGvTvh~v~~~~D~G~Ii~q~---~~~i~~~-----dt~~~L~~rl~~~~------~~ll~~~l~~~ 185 (216)
T 2ywr_A 130 VKFSGCTVHIVDESVDAGPVIVQA---VVPVLPE-----DDENTLADRILKWE------HKILPQTVQWF 185 (216)
T ss_dssp CSEEEEEEEECCSSSSCSCEEEEE---EEECCTT-----CCHHHHHHHHHHHH------HHHHHHHHHHH
T ss_pred CCeEEEEEEEEcccCCCCCEEEEE---EEEcCCC-----CCHHHHHHHHHHHH------HHHHHHHHHHH
Confidence 9988777642 333322222221 1223332 47888887776543 35555555554
No 224
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=24.11 E-value=78 Score=23.92 Aligned_cols=40 Identities=8% Similarity=-0.060 Sum_probs=22.9
Q ss_pred HHHHHHHhh-cCCCEEEECC-CC--ChHHHHHHh-----CCCeEEEeCc
Q 017557 9 PAIEAIVRD-IKPNIVFFDF-TY--WLPSLARKL-----GIKSIAFVTV 48 (369)
Q Consensus 9 ~~l~~~l~~-~~pD~vI~D~-~~--~~~~~A~~l-----giP~v~~~~~ 48 (369)
....+.+++ .+||+||.|. .+ -+..+.+.+ ++|.+.++..
T Consensus 39 ~~a~~~l~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~ 87 (154)
T 2qsj_A 39 SDALAFLEADNTVDLILLDVNLPDAEAIDGLVRLKRFDPSNAVALISGE 87 (154)
T ss_dssp HHHHHHHHTTCCCSEEEECC------CHHHHHHHHHHCTTSEEEEC---
T ss_pred HHHHHHHhccCCCCEEEEeCCCCCCchHHHHHHHHHhCCCCeEEEEeCC
Confidence 455566666 7899999998 44 234444433 5777776543
No 225
>2qvg_A Two component response regulator; NYSGXRC, PSI-2, structural genomics, protein structure initiative; 1.50A {Legionella pneumophila subsp}
Probab=24.10 E-value=1.3e+02 Score=22.11 Aligned_cols=41 Identities=12% Similarity=0.221 Sum_probs=26.3
Q ss_pred HHHHHHHhh------cCCCEEEECC-CC--ChHHHHHHh-------CCCeEEEeCch
Q 017557 9 PAIEAIVRD------IKPNIVFFDF-TY--WLPSLARKL-------GIKSIAFVTVS 49 (369)
Q Consensus 9 ~~l~~~l~~------~~pD~vI~D~-~~--~~~~~A~~l-------giP~v~~~~~~ 49 (369)
....+.+++ .+||+||.|. .+ -+..+++.+ ++|.+.++...
T Consensus 43 ~~a~~~l~~~~~~~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~ls~~~ 99 (143)
T 2qvg_A 43 NQALDMLYGRNKENKIHPKLILLDINIPKMNGIEFLKELRDDSSFTDIEVFVLTAAY 99 (143)
T ss_dssp HHHHHHHHTCTTCCCCCCSEEEEETTCTTSCHHHHHHHHTTSGGGTTCEEEEEESCC
T ss_pred HHHHHHHHhcccccCCCCCEEEEecCCCCCCHHHHHHHHHcCccccCCcEEEEeCCC
Confidence 344555655 6799999998 44 455555554 46777776543
No 226
>3qw4_B UMP synthase; N-terminal orotidine monophosphate decarboxylase domain C-TE orotate phosphoribosyltransferase domain, transferase, LYAS; HET: U5P; 3.00A {Leishmania donovani}
Probab=24.08 E-value=60 Score=30.89 Aligned_cols=40 Identities=10% Similarity=0.099 Sum_probs=29.0
Q ss_pred hcHHHHHHHHhhcCCCEEEE-CC--CCChHHHHHHhCCCeEEE
Q 017557 6 LTEPAIEAIVRDIKPNIVFF-DF--TYWLPSLARKLGIKSIAF 45 (369)
Q Consensus 6 ~~~~~l~~~l~~~~pD~vI~-D~--~~~~~~~A~~lgiP~v~~ 45 (369)
.+...+.+.+++.++|+|+. +. .+++..+|+.+|+|++..
T Consensus 303 ~l~~~la~~~~~~~~D~Ivg~~~gGi~~A~~lA~~L~~p~~~~ 345 (453)
T 3qw4_B 303 LVAREYAKVLRHYKFDRIAGLPYAALPIASAISNEMNVPLIYP 345 (453)
T ss_dssp HHHHHHHHHHTTSCCSEEEECTTTTHHHHHHHHHHHCCCEEEE
T ss_pred HHHHHHHHHhccCCCCEEEeccCCcHHHHHHHHHHhCCCEEEE
Confidence 34445555555568999984 54 578999999999998754
No 227
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=24.06 E-value=1.8e+02 Score=25.85 Aligned_cols=18 Identities=22% Similarity=0.082 Sum_probs=11.5
Q ss_pred HHHHHHhhhcce-EEEEeec
Q 017557 287 INSRLMGEDLKV-GVEVERG 305 (369)
Q Consensus 287 ~na~~v~~~~g~-G~~l~~~ 305 (369)
.-+...... |+ |+.+...
T Consensus 244 ~~a~AAvAl-GAdGl~IE~H 262 (298)
T 3fs2_A 244 TLARAAVAV-GVAGFFIETH 262 (298)
T ss_dssp HHHHHHHHH-CCSEEEEEEE
T ss_pred HHHHHHHHc-CCCEEEEEec
Confidence 345556666 88 6777655
No 228
>1yio_A Response regulatory protein; transcription regulation, DNA binding protein; 2.20A {Pseudomonas fluorescens} SCOP: a.4.6.2 c.23.1.1 PDB: 1zn2_A
Probab=23.95 E-value=84 Score=25.32 Aligned_cols=40 Identities=15% Similarity=0.091 Sum_probs=26.1
Q ss_pred HHHHHHhhcCCCEEEECC-CC--ChHHHHHHh-----CCCeEEEeCch
Q 017557 10 AIEAIVRDIKPNIVFFDF-TY--WLPSLARKL-----GIKSIAFVTVS 49 (369)
Q Consensus 10 ~l~~~l~~~~pD~vI~D~-~~--~~~~~A~~l-----giP~v~~~~~~ 49 (369)
...+.++..+||+||.|. .+ -+..+++.+ ++|.+.++...
T Consensus 39 ~al~~~~~~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~ls~~~ 86 (208)
T 1yio_A 39 TFLEHRRPEQHGCLVLDMRMPGMSGIELQEQLTAISDGIPIVFITAHG 86 (208)
T ss_dssp HHHHHCCTTSCEEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEESCT
T ss_pred HHHHhhhccCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEeCCC
Confidence 334445556899999998 54 455555544 58888876543
No 229
>3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis}
Probab=23.69 E-value=1.2e+02 Score=25.44 Aligned_cols=41 Identities=15% Similarity=0.167 Sum_probs=27.7
Q ss_pred HHHHHHHhhcCCCEEEECC-CC--ChHHHHHHh-----CCCeEEEeCch
Q 017557 9 PAIEAIVRDIKPNIVFFDF-TY--WLPSLARKL-----GIKSIAFVTVS 49 (369)
Q Consensus 9 ~~l~~~l~~~~pD~vI~D~-~~--~~~~~A~~l-----giP~v~~~~~~ 49 (369)
....+.+++.+||+||.|. .+ -+..+++.+ ++|.+.++...
T Consensus 57 ~~al~~~~~~~~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii~lt~~~ 105 (250)
T 3r0j_A 57 AQALDRARETRPDAVILDVXMPGMDGFGVLRRLRADGIDAPALFLTARD 105 (250)
T ss_dssp HHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEECST
T ss_pred HHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEECCC
Confidence 3445556667899999998 54 355555543 58888877644
No 230
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=23.69 E-value=49 Score=27.83 Aligned_cols=29 Identities=17% Similarity=0.025 Sum_probs=23.9
Q ss_pred CCEEEECC-CCChHHHHHHhCCCeEEEeCc
Q 017557 20 PNIVFFDF-TYWLPSLARKLGIKSIAFVTV 48 (369)
Q Consensus 20 pD~vI~D~-~~~~~~~A~~lgiP~v~~~~~ 48 (369)
.-+||++. ...+...|+++|||+..+.+.
T Consensus 30 I~~Vvs~~~~~~~~~~A~~~gIp~~~~~~~ 59 (209)
T 1meo_A 30 IDIVISNKAAVAGLDKAERAGIPTRVINHK 59 (209)
T ss_dssp EEEEEESSTTCHHHHHHHHTTCCEEECCGG
T ss_pred EEEEEeCCCChHHHHHHHHcCCCEEEECcc
Confidence 45788998 878888999999999886653
No 231
>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=23.59 E-value=42 Score=32.72 Aligned_cols=35 Identities=20% Similarity=0.328 Sum_probs=27.9
Q ss_pred HHHHHHHHhhcCCCEEEECCCCChHHHHHHhCCCeEE
Q 017557 8 EPAIEAIVRDIKPNIVFFDFTYWLPSLARKLGIKSIA 44 (369)
Q Consensus 8 ~~~l~~~l~~~~pD~vI~D~~~~~~~~A~~lgiP~v~ 44 (369)
..++++++++.+||++|... ....+|+++|||++.
T Consensus 445 ~~el~~~i~~~~pDl~ig~~--~~~~~a~k~gIP~~~ 479 (533)
T 1mio_A 445 HHDMEVVLEKLKPDMFFAGI--KEKFVIQKGGVLSKQ 479 (533)
T ss_dssp HHHHHHHHHHHCCSEEEECH--HHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHhcCCCEEEccc--chhHHHHhcCCCEEE
Confidence 34678888888999999765 246789999999984
No 232
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=23.57 E-value=24 Score=30.94 Aligned_cols=29 Identities=17% Similarity=0.404 Sum_probs=24.2
Q ss_pred CCCccceeecCCCchHHHHHHh------CCccccccc
Q 017557 251 HPSVGCFVTHCGSGSLSEAMVN------ECQLVLLPN 281 (369)
Q Consensus 251 ~~~~~~~ItHgG~~s~~Eal~~------GvP~i~~P~ 281 (369)
.+++ +|+=||=||+.+++.. ++|++++|.
T Consensus 35 ~~D~--vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~ 69 (272)
T 2i2c_A 35 EPEI--VISIGGDGTFLSAFHQYEERLDEIAFIGIHT 69 (272)
T ss_dssp SCSE--EEEEESHHHHHHHHHHTGGGTTTCEEEEEES
T ss_pred CCCE--EEEEcCcHHHHHHHHHHhhcCCCCCEEEEeC
Confidence 3455 9999999999998764 889999975
No 233
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=23.34 E-value=1.5e+02 Score=21.41 Aligned_cols=41 Identities=12% Similarity=0.138 Sum_probs=26.8
Q ss_pred HHHHHHHhh-------cCCCEEEECC-CC--ChHHHHHH-------hCCCeEEEeCch
Q 017557 9 PAIEAIVRD-------IKPNIVFFDF-TY--WLPSLARK-------LGIKSIAFVTVS 49 (369)
Q Consensus 9 ~~l~~~l~~-------~~pD~vI~D~-~~--~~~~~A~~-------lgiP~v~~~~~~ 49 (369)
....+.+++ .+||+||.|. .+ .+..+.+. -++|.+.++...
T Consensus 38 ~~a~~~l~~~~~~~~~~~~dlvi~d~~~~~~~g~~~~~~l~~~~~~~~~pii~ls~~~ 95 (140)
T 1k68_A 38 MEAMAYLRQEGEYANASRPDLILLXLNLPKKDGREVLAEIKSDPTLKRIPVVVLSTSI 95 (140)
T ss_dssp HHHHHHHTTCGGGGSCCCCSEEEECSSCSSSCHHHHHHHHHHSTTGGGSCEEEEESCC
T ss_pred HHHHHHHHcccccccCCCCcEEEEecCCCcccHHHHHHHHHcCcccccccEEEEecCC
Confidence 445556665 6899999998 54 34554444 357888877644
No 234
>3n0r_A Response regulator; sigma factor, receiver, two-component SI transduction, signaling protein; HET: MSE GOL; 1.25A {Caulobacter vibrioides} PDB: 3t0y_A
Probab=23.30 E-value=1.2e+02 Score=26.47 Aligned_cols=39 Identities=13% Similarity=0.121 Sum_probs=26.5
Q ss_pred HHHHHHhhcCCCEEEECC-CC-C--hHHHHH----HhCCCeEEEeCc
Q 017557 10 AIEAIVRDIKPNIVFFDF-TY-W--LPSLAR----KLGIKSIAFVTV 48 (369)
Q Consensus 10 ~l~~~l~~~~pD~vI~D~-~~-~--~~~~A~----~lgiP~v~~~~~ 48 (369)
...+.+++.+||+||.|. .+ . +..+++ ..++|.|.++..
T Consensus 196 eAl~~~~~~~~dlvl~D~~MPd~mdG~e~~~~ir~~~~~piI~lT~~ 242 (286)
T 3n0r_A 196 EALEAVTRRTPGLVLADIQLADGSSGIDAVKDILGRMDVPVIFITAF 242 (286)
T ss_dssp HHHHHHHHCCCSEEEEESCCTTSCCTTTTTHHHHHHTTCCEEEEESC
T ss_pred HHHHHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHhcCCCCEEEEeCC
Confidence 444566677899999999 77 2 333332 228999998765
No 235
>3aek_B Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_B* 3aer_B 3aes_B* 3aeu_B 3aet_B
Probab=23.20 E-value=58 Score=31.59 Aligned_cols=36 Identities=17% Similarity=0.294 Sum_probs=28.5
Q ss_pred HHHHHHHHhhcCCCEEEECCCCChHHHHHHhCCCeEEE
Q 017557 8 EPAIEAIVRDIKPNIVFFDFTYWLPSLARKLGIKSIAF 45 (369)
Q Consensus 8 ~~~l~~~l~~~~pD~vI~D~~~~~~~~A~~lgiP~v~~ 45 (369)
..++++.+++.+||++|.+. ....+|+++|||++.+
T Consensus 338 ~~el~~~i~~~~pDL~ig~~--~~~~~a~~~giP~~~i 373 (525)
T 3aek_B 338 YLEVEKAIEAAAPELILGTQ--MERNIAKKLGLPCAVI 373 (525)
T ss_dssp HHHHHHHHHHHCCSEEEECH--HHHHHHHHHTCCEEEC
T ss_pred HHHHHHHHhhcCCCEEEecc--hhHHHHHHcCCCEEEe
Confidence 35677888888999999865 3566789999999873
No 236
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=23.05 E-value=98 Score=22.80 Aligned_cols=39 Identities=13% Similarity=0.102 Sum_probs=23.7
Q ss_pred HHHHHHHhhcCCCEEEECC-CC--ChHHHHHHh-------CCCeEEEeC
Q 017557 9 PAIEAIVRDIKPNIVFFDF-TY--WLPSLARKL-------GIKSIAFVT 47 (369)
Q Consensus 9 ~~l~~~l~~~~pD~vI~D~-~~--~~~~~A~~l-------giP~v~~~~ 47 (369)
....+.+++.+||+||.|. .+ -+..+.+.+ ++|.+.++.
T Consensus 41 ~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~ 89 (142)
T 3cg4_A 41 GQCIDLLKKGFSGVVLLDIMMPGMDGWDTIRAILDNSLEQGIAIVMLTA 89 (142)
T ss_dssp HHHHHHHHTCCCEEEEEESCCSSSCHHHHHHHHHHTTCCTTEEEEEEEC
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhcccCCCCEEEEEC
Confidence 3455566667899999998 44 344444443 355665543
No 237
>1vdm_A Purine phosphoribosyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Pyrococcus horikoshii} SCOP: c.61.1.1
Probab=23.04 E-value=81 Score=24.44 Aligned_cols=37 Identities=19% Similarity=0.207 Sum_probs=25.2
Q ss_pred HHHHHHHHhhcCCCEEE-ECC--CCChHHHHHHhCCCeEE
Q 017557 8 EPAIEAIVRDIKPNIVF-FDF--TYWLPSLARKLGIKSIA 44 (369)
Q Consensus 8 ~~~l~~~l~~~~pD~vI-~D~--~~~~~~~A~~lgiP~v~ 44 (369)
...+.+.+++.++|+|| .+. ...+..+|+.+|+|.+.
T Consensus 15 ~~~la~~i~~~~~d~iv~v~~gg~~~a~~la~~l~~~~~~ 54 (153)
T 1vdm_A 15 IFALAEKLREYKPDVIIGVARGGLIPAVRLSHILGDIPLK 54 (153)
T ss_dssp HHHHHHHHHHHCCSEEEEETTTTHHHHHHHHHHTTSCCEE
T ss_pred HHHHHHHHHccCCCEEEEECCcCHHHHHHHHHHhCCCceE
Confidence 33444444445789887 343 56788999999999764
No 238
>2xzm_B RPS0E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_B
Probab=23.03 E-value=30 Score=29.89 Aligned_cols=31 Identities=19% Similarity=0.240 Sum_probs=24.3
Q ss_pred CCCEEE-ECC--CCChHHHHHHhCCCeEEEeCch
Q 017557 19 KPNIVF-FDF--TYWLPSLARKLGIKSIAFVTVS 49 (369)
Q Consensus 19 ~pD~vI-~D~--~~~~~~~A~~lgiP~v~~~~~~ 49 (369)
.||+|| +|. ...+..=|.++|||+|++.-+.
T Consensus 114 ~PdlliV~Dp~~e~~ai~EA~~l~IPvIalvDTn 147 (241)
T 2xzm_B 114 EPRVLIVTDPRSDFQAIKEASYVNIPVIALCDSD 147 (241)
T ss_dssp CCSEEEESCTTTTHHHHHHHTTTTCCEEECCCSS
T ss_pred CCCEEEEECCCcchHHHHHHHHhCCCEEEEecCC
Confidence 488774 787 4467788999999999987554
No 239
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=22.92 E-value=1.3e+02 Score=27.24 Aligned_cols=62 Identities=13% Similarity=0.055 Sum_probs=40.9
Q ss_pred CceEEEeeCCCccCCHHHHHHHHHHHHhcCCcEEEEECCCCCCCccccCCchhHHHHhcCCCeeEecccChHHhhcCCCc
Q 017557 175 KSLIFCALGSECVLKKDQFQELILGFELTGLPFFAALKPPTGHDTIESALPEGFEERVKGRGFVHGGWVQQQLILKHPSV 254 (369)
Q Consensus 175 ~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~~ 254 (369)
+.+-.|.+|.++ ..+++.+...|.+++..-... .. .. ... ..+....++++.+++
T Consensus 149 ktvgIiGlG~IG-------~~vA~~l~~~G~~V~~~d~~~------~~----~~-----~~~---~~~~~l~ell~~aDv 203 (343)
T 2yq5_A 149 LTVGLIGVGHIG-------SAVAEIFSAMGAKVIAYDVAY------NP----EF-----EPF---LTYTDFDTVLKEADI 203 (343)
T ss_dssp SEEEEECCSHHH-------HHHHHHHHHTTCEEEEECSSC------CG----GG-----TTT---CEECCHHHHHHHCSE
T ss_pred CeEEEEecCHHH-------HHHHHHHhhCCCEEEEECCCh------hh----hh-----hcc---ccccCHHHHHhcCCE
Confidence 458899999998 667777777788866553321 00 00 011 234577789999999
Q ss_pred cceeecCCC
Q 017557 255 GCFVTHCGS 263 (369)
Q Consensus 255 ~~~ItHgG~ 263 (369)
++.|+-.
T Consensus 204 --V~l~~Pl 210 (343)
T 2yq5_A 204 --VSLHTPL 210 (343)
T ss_dssp --EEECCCC
T ss_pred --EEEcCCC
Confidence 8888754
No 240
>1o57_A PUR operon repressor; purine operon repressor, helix-turn-helix domain, phosphoribosyltranseferases, domain recombination, DNA binding; HET: EPE P6G 2PE PG4 1PE; 2.20A {Bacillus subtilis} SCOP: a.4.5.40 c.61.1.1 PDB: 1p4a_A*
Probab=22.89 E-value=70 Score=28.37 Aligned_cols=38 Identities=8% Similarity=0.076 Sum_probs=24.9
Q ss_pred cHHHHHHHHhhcCCCEEE-ECC--CCChHHHHHHhCCCeEE
Q 017557 7 TEPAIEAIVRDIKPNIVF-FDF--TYWLPSLARKLGIKSIA 44 (369)
Q Consensus 7 ~~~~l~~~l~~~~pD~vI-~D~--~~~~~~~A~~lgiP~v~ 44 (369)
+...+.+.+++.++|+|| .+. ...+..+|+.+|+|++.
T Consensus 118 la~~la~~~~~~~~d~Iv~V~~rG~~~A~~lA~~L~vp~v~ 158 (291)
T 1o57_A 118 VGKLFASVFAEREIDVVMTVATKGIPLAYAAASYLNVPVVI 158 (291)
T ss_dssp HHHHHHHHTTTSCCSEEEEETTTTHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHhhccCCCEEEEECCCCHHHHHHHHHHhCCCEEE
Confidence 333444444444688887 344 46788899999999765
No 241
>1n2z_A Vitamin B12 transport protein BTUF; HET: CNC PG4; 2.00A {Escherichia coli} SCOP: c.92.2.2 PDB: 2qi9_F* 4dbl_E 1n4a_A* 1n4d_A
Probab=22.47 E-value=80 Score=26.59 Aligned_cols=37 Identities=27% Similarity=0.237 Sum_probs=23.4
Q ss_pred HHHHHHhhcCCCEEEECC-CCC--hHHHHHHhCCCeEEEeC
Q 017557 10 AIEAIVRDIKPNIVFFDF-TYW--LPSLARKLGIKSIAFVT 47 (369)
Q Consensus 10 ~l~~~l~~~~pD~vI~D~-~~~--~~~~A~~lgiP~v~~~~ 47 (369)
.+++++ +.+||+||... ... ...--++.|||++.+..
T Consensus 49 n~E~i~-~l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~~ 88 (245)
T 1n2z_A 49 NLERIV-ALKPDLVIAWRGGNAERQVDQLASLGIKVMWVDA 88 (245)
T ss_dssp CHHHHH-HTCCSEEEECTTTSCHHHHHHHHHHTCCEEECCC
T ss_pred CHHHHh-ccCCCEEEEeCCCCcHHHHHHHHHCCCcEEEeCC
Confidence 344444 57899999854 222 23344577999987653
No 242
>2r7a_A Bacterial heme binding protein; periplasmic binding protein, heme transport, transport protein; HET: HEM; 2.05A {Shigella dysenteriae} PDB: 2rg7_A
Probab=22.38 E-value=61 Score=27.54 Aligned_cols=36 Identities=14% Similarity=0.139 Sum_probs=23.4
Q ss_pred HHHHHHhhcCCCEEEECC-CCC--hHHHHHHhCCCeEEEe
Q 017557 10 AIEAIVRDIKPNIVFFDF-TYW--LPSLARKLGIKSIAFV 46 (369)
Q Consensus 10 ~l~~~l~~~~pD~vI~D~-~~~--~~~~A~~lgiP~v~~~ 46 (369)
.+++++ +.+||+||... ... ...--+++|||++.+.
T Consensus 51 n~E~i~-~l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~ 89 (256)
T 2r7a_A 51 SSEGIL-SLRPDSVITWQDAGPQIVLDQLRAQKVNVVTLP 89 (256)
T ss_dssp CHHHHH-TTCCSEEEEETTCSCHHHHHHHHHTTCEEEEEC
T ss_pred CHHHHH-ccCCCEEEEcCCCCCHHHHHHHHHcCCcEEEec
Confidence 444444 57899999866 332 2333456899998874
No 243
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=22.21 E-value=80 Score=28.79 Aligned_cols=36 Identities=8% Similarity=-0.016 Sum_probs=23.5
Q ss_pred ceEEEeeCCCccCCHHHHHHHHHHHHhcCCcEEEEECC
Q 017557 176 SLIFCALGSECVLKKDQFQELILGFELTGLPFFAALKP 213 (369)
Q Consensus 176 ~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~ 213 (369)
.+++++.|+.+- ...+..++++|.+.|.++.+.+..
T Consensus 22 rIl~~~~~~~GH--v~p~l~La~~L~~~Gh~V~v~~~~ 57 (415)
T 3rsc_A 22 HLLIVNVASHGL--ILPTLTVVTELVRRGHRVSYVTAG 57 (415)
T ss_dssp EEEEECCSCHHH--HGGGHHHHHHHHHTTCEEEEEECG
T ss_pred EEEEEeCCCccc--cccHHHHHHHHHHCCCEEEEEeCH
Confidence 377777765442 223456778888888888887743
No 244
>1a04_A Nitrate/nitrite response regulator protein NARL; signal transduction protein, response regulators, two- component systems; 2.20A {Escherichia coli} SCOP: a.4.6.2 c.23.1.1 PDB: 1rnl_A
Probab=22.16 E-value=1.2e+02 Score=24.51 Aligned_cols=40 Identities=13% Similarity=0.179 Sum_probs=26.6
Q ss_pred HHHHHHHhhcCCCEEEECC-CC--ChHHHHHHh-----CCCeEEEeCc
Q 017557 9 PAIEAIVRDIKPNIVFFDF-TY--WLPSLARKL-----GIKSIAFVTV 48 (369)
Q Consensus 9 ~~l~~~l~~~~pD~vI~D~-~~--~~~~~A~~l-----giP~v~~~~~ 48 (369)
....+.+++.+||+||.|. .+ -+..+++.+ ++|.+.++..
T Consensus 41 ~~al~~~~~~~~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii~ls~~ 88 (215)
T 1a04_A 41 EQGIELAESLDPDLILLDLNMPGMNGLETLDKLREKSLSGRIVVFSVS 88 (215)
T ss_dssp HHHHHHHHHHCCSEEEEETTSTTSCHHHHHHHHHHSCCCSEEEEEECC
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCcEEEEECC
Confidence 3445566667899999998 54 455555554 5777776654
No 245
>1i3c_A Response regulator RCP1; phytochrome, signaling protein; 1.90A {Synechocystis SP} SCOP: c.23.1.1 PDB: 1jlk_A
Probab=22.08 E-value=1.7e+02 Score=21.76 Aligned_cols=32 Identities=16% Similarity=0.265 Sum_probs=21.7
Q ss_pred cCCCEEEECC-CC--ChHHHHHHh-------CCCeEEEeCch
Q 017557 18 IKPNIVFFDF-TY--WLPSLARKL-------GIKSIAFVTVS 49 (369)
Q Consensus 18 ~~pD~vI~D~-~~--~~~~~A~~l-------giP~v~~~~~~ 49 (369)
.+||+||.|. .+ -+..+++++ ++|.+.++...
T Consensus 60 ~~~dlillD~~lp~~~g~~l~~~l~~~~~~~~~piiils~~~ 101 (149)
T 1i3c_A 60 PRPNLILLDLNLPKKDGREVLAEIKQNPDLKRIPVVVLTTSH 101 (149)
T ss_dssp CCCSEEEECSCCSSSCHHHHHHHHHHCTTTTTSCEEEEESCC
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHhCcCcCCCeEEEEECCC
Confidence 4799999998 54 355555543 57888876543
No 246
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=21.89 E-value=1.1e+02 Score=21.84 Aligned_cols=46 Identities=9% Similarity=0.094 Sum_probs=32.5
Q ss_pred hCCcccccccccchhHHHHHHhhhcceEEEEeecCCCCccCHHHHHHHHHHHhc
Q 017557 272 NECQLVLLPNVGDQIINSRLMGEDLKVGVEVERGDEDGLFTRDGVCKAVKAVMD 325 (369)
Q Consensus 272 ~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~~l~~ai~~ll~ 325 (369)
..+|+|++ ..+.........+. |+--.+.+. ++.+++.++|+.++.
T Consensus 79 ~~~~ii~~--~~~~~~~~~~~~~~-g~~~~l~kp-----~~~~~l~~~i~~~~~ 124 (127)
T 2gkg_A 79 KNVPIVII--GNPDGFAQHRKLKA-HADEYVAKP-----VDADQLVERAGALIG 124 (127)
T ss_dssp TTSCEEEE--ECGGGHHHHHHSTT-CCSEEEESS-----CCHHHHHHHHHHHHC
T ss_pred cCCCEEEE--ecCCchhHHHHHHh-CcchheeCC-----CCHHHHHHHHHHHHc
Confidence 46888888 33444455555666 775566664 799999999998875
No 247
>2r25_B Osmosensing histidine protein kinase SLN1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} SCOP: c.23.1.1 PDB: 1oxk_B 1oxb_B
Probab=21.75 E-value=2e+02 Score=20.91 Aligned_cols=31 Identities=13% Similarity=0.062 Sum_probs=20.7
Q ss_pred cCCCEEEECC-CC--ChHHHHHHh------CCCeEEEeCc
Q 017557 18 IKPNIVFFDF-TY--WLPSLARKL------GIKSIAFVTV 48 (369)
Q Consensus 18 ~~pD~vI~D~-~~--~~~~~A~~l------giP~v~~~~~ 48 (369)
.+||+||.|. .+ -+..+++.+ .+|.+.++..
T Consensus 51 ~~~dlvllD~~mp~~~G~~~~~~lr~~~~~~~~ii~lt~~ 90 (133)
T 2r25_B 51 ENYNMIFMDVQMPKVDGLLSTKMIRRDLGYTSPIVALTAF 90 (133)
T ss_dssp CCCSEEEECSCCSSSCHHHHHHHHHHHSCCCSCEEEEESC
T ss_pred CCCCEEEEeCCCCCCChHHHHHHHHhhcCCCCCEEEEECC
Confidence 5799999998 55 355554433 4677777654
No 248
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=21.75 E-value=3.1e+02 Score=22.59 Aligned_cols=102 Identities=11% Similarity=0.096 Sum_probs=49.1
Q ss_pred hHHHhhhccCCCCceEEEeeCCCccCCHHHHHHHHHHHHhcCCcEEEEECCCCCCCccccCCchhHHHHhcCCCeeEecc
Q 017557 163 EEFEMLFSSFKAKSLIFCALGSECVLKKDQFQELILGFELTGLPFFAALKPPTGHDTIESALPEGFEERVKGRGFVHGGW 242 (369)
Q Consensus 163 ~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~ 242 (369)
.++-++|.+.. ..+|+.|... -.+.+..++..+.+-+++=+...... ....|..+. ...++.+.
T Consensus 43 ~~lg~~La~~g---~~lV~GGG~~----GlM~a~~~gA~~~GG~viGv~p~~l~----~~e~~~~~~-----~~~i~~~~ 106 (199)
T 3qua_A 43 AEVGSSIAARG---WTLVSGGGNV----SAMGAVAQAARAKGGHTVGVIPKALV----HRELADVDA-----AELIVTDT 106 (199)
T ss_dssp HHHHHHHHHTT---CEEEECCBCS----HHHHHHHHHHHHTTCCEEEEEEGGGT----TTTTBCTTS-----SEEEEESS
T ss_pred HHHHHHHHHCC---CEEEECCCcc----CHHHHHHHHHHHcCCcEEEEeCchhh----hccccCCCC-----CeeEEcCC
Confidence 45666666543 4556655431 13345555554555555544432100 011111000 12333344
Q ss_pred cChH--HhhcCCCccceeecCCCchHHHHHH---------hCCccccccc
Q 017557 243 VQQQ--LILKHPSVGCFVTHCGSGSLSEAMV---------NECQLVLLPN 281 (369)
Q Consensus 243 ~pq~--~lL~~~~~~~~ItHgG~~s~~Eal~---------~GvP~i~~P~ 281 (369)
.... .+..+++. .++--||.||+-|... +++|++.+-.
T Consensus 107 ~~~Rk~~m~~~sda-~IalPGG~GTldEl~e~lt~~qlg~~~kPvvlln~ 155 (199)
T 3qua_A 107 MRERKREMEHRSDA-FIALPGGIGTLEEFFEAWTAGYLGMHDKPLILLDP 155 (199)
T ss_dssp HHHHHHHHHHHCSE-EEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECT
T ss_pred HHHHHHHHHHhcCc-cEEeCCCccHHHHHHHHHHHHHhccCCCCEEEEcC
Confidence 4332 24455555 3555677888877643 5899988753
No 249
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=21.59 E-value=64 Score=27.99 Aligned_cols=37 Identities=32% Similarity=0.412 Sum_probs=24.8
Q ss_pred HHHHHhhcCCCEEEECC-C-------------CChHHHHHHhCCCeEEEeC
Q 017557 11 IEAIVRDIKPNIVFFDF-T-------------YWLPSLARKLGIKSIAFVT 47 (369)
Q Consensus 11 l~~~l~~~~pD~vI~D~-~-------------~~~~~~A~~lgiP~v~~~~ 47 (369)
+..++...+||+||+-. . ..|+.-|..+|||.++++.
T Consensus 77 l~~l~~~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 127 (251)
T 2phj_A 77 YRVILEEKKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSA 127 (251)
T ss_dssp HHTTTTTCCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHhcCCCCCCEEEECCcCCCcCCCCCccchHHHHHHHHHHcCCCeEEEEc
Confidence 33444445799999853 1 1234557778999999875
No 250
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=21.51 E-value=2.5e+02 Score=25.14 Aligned_cols=65 Identities=12% Similarity=0.081 Sum_probs=41.6
Q ss_pred CceEEEeeCCCccCCHHHHHHHHHHHHhcCCcEEEEECCCCCCCccccCCchhHHHHhcCCCeeEecccChHHhhcCCCc
Q 017557 175 KSLIFCALGSECVLKKDQFQELILGFELTGLPFFAALKPPTGHDTIESALPEGFEERVKGRGFVHGGWVQQQLILKHPSV 254 (369)
Q Consensus 175 ~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~~ 254 (369)
+.+-.|.+|.++ ..+++.+...|.+++..-... ......... ++ .+....++++.+++
T Consensus 146 ~tvGIIG~G~IG-------~~vA~~l~~~G~~V~~~d~~~---------~~~~~~~~~---g~---~~~~l~ell~~aDv 203 (330)
T 4e5n_A 146 ATVGFLGMGAIG-------LAMADRLQGWGATLQYHEAKA---------LDTQTEQRL---GL---RQVACSELFASSDF 203 (330)
T ss_dssp CEEEEECCSHHH-------HHHHHHTTTSCCEEEEECSSC---------CCHHHHHHH---TE---EECCHHHHHHHCSE
T ss_pred CEEEEEeeCHHH-------HHHHHHHHHCCCEEEEECCCC---------CcHhHHHhc---Cc---eeCCHHHHHhhCCE
Confidence 458899999998 778888877888865542211 111111111 33 34567788999998
Q ss_pred cceeecCCC
Q 017557 255 GCFVTHCGS 263 (369)
Q Consensus 255 ~~~ItHgG~ 263 (369)
++.|+-.
T Consensus 204 --V~l~~P~ 210 (330)
T 4e5n_A 204 --ILLALPL 210 (330)
T ss_dssp --EEECCCC
T ss_pred --EEEcCCC
Confidence 8888754
No 251
>2gwr_A DNA-binding response regulator MTRA; two-component regulatory system, transcription regulation, phosphorylation, OMPR family; 2.10A {Mycobacterium tuberculosis} PDB: 3nhz_A
Probab=21.50 E-value=95 Score=25.80 Aligned_cols=36 Identities=22% Similarity=0.437 Sum_probs=24.2
Q ss_pred HHHHhhcCCCEEEECC-CC--ChHHHHHHh----CCCeEEEeC
Q 017557 12 EAIVRDIKPNIVFFDF-TY--WLPSLARKL----GIKSIAFVT 47 (369)
Q Consensus 12 ~~~l~~~~pD~vI~D~-~~--~~~~~A~~l----giP~v~~~~ 47 (369)
.+.+++.+||+||.|. .+ -+..+++.+ ++|.+.++.
T Consensus 42 l~~l~~~~~dlvilD~~l~~~~g~~~~~~lr~~~~~~ii~lt~ 84 (238)
T 2gwr_A 42 LTAVRELRPDLVLLDLMLPGMNGIDVCRVLRADSGVPIVMLTA 84 (238)
T ss_dssp HHHHHHHCCSEEEEESSCSSSCHHHHHHHHHTTCCCCEEEEEE
T ss_pred HHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCCCCcEEEEeC
Confidence 3455566899999998 54 355555544 688887654
No 252
>2ffi_A 2-pyrone-4,6-dicarboxylic acid hydrolase, putativ; TIM-barrel protein., structural genomics, PSI, protein struc initiative; 2.61A {Pseudomonas putida} SCOP: c.1.9.15
Probab=21.42 E-value=90 Score=26.89 Aligned_cols=92 Identities=8% Similarity=-0.056 Sum_probs=51.9
Q ss_pred hhcCcceeEeCCCCCCCCCCCchhHHHhhhccCCCCceEEEeeCCCcc----CCHHHHHHHHHHHHhcCCcEEEEECCCC
Q 017557 140 SQFEKRVILAGPVLPEPPASVLEEEFEMLFSSFKAKSLIFCALGSECV----LKKDQFQELILGFELTGLPFFAALKPPT 215 (369)
Q Consensus 140 ~~~~~~~~~vGp~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~----~~~~~~~~~~~~l~~~~~~~i~~~~~~~ 215 (369)
+..|.+++.++.+.+.. ..+++..+.+. + ++-|-++.... .....+..+++.+++.+.++++-.+..
T Consensus 77 ~~~p~r~~~~~~v~p~~----~~~el~~~~~~-g---~~Gi~~~~~~~~~~~~~~~~~~~~~~~a~~~~lpv~iH~~~~- 147 (288)
T 2ffi_A 77 QTVPGQLRGVVMLERDV----EQATLAEMARL-G---VRGVRLNLMGQDMPDLTGAQWRPLLERIGEQGWHVELHRQVA- 147 (288)
T ss_dssp HHSTTTBCCBBCCCSSC----CHHHHHHHHTT-T---CCEEECCCSSSCCCCTTSTTTHHHHHHHHHHTCEEEECSCTT-
T ss_pred HHCCCCEEEEEEeCCCC----CHHHHHHHHHC-C---CeEEEEecccCCCCCcccHHHHHHHHHHHHCCCeEEEeechh-
Confidence 34555666666655432 14677776642 2 44445554322 334567888888888888866643221
Q ss_pred CCCccccCCchhHHHHhcCCCeeEecccChHH-hhcCCCccceeecCCCchH
Q 017557 216 GHDTIESALPEGFEERVKGRGFVHGGWVQQQL-ILKHPSVGCFVTHCGSGSL 266 (369)
Q Consensus 216 ~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~-lL~~~~~~~~ItHgG~~s~ 266 (369)
. +..+ .. +-.++ ++++|.|||.+..
T Consensus 148 -------~-~~~~-----------------~~~~~~~p-l~~vi~H~g~~~~ 173 (288)
T 2ffi_A 148 -------D-IPVL-----------------VRALQPYG-LDIVIDHFGRPDA 173 (288)
T ss_dssp -------T-HHHH-----------------HHHHTTTT-CCEEESGGGSCCT
T ss_pred -------h-HHHH-----------------HHHHHHCC-CCEEEECCCCCCC
Confidence 0 1111 12 23456 7889999998764
No 253
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=21.39 E-value=3e+02 Score=22.93 Aligned_cols=102 Identities=13% Similarity=0.031 Sum_probs=51.7
Q ss_pred hhHHHhhhccCCCCceEEEeeCCC-ccCCHHHHHHHHHHHHhcCCcEEEEECCCCCCCccccCCchhHHHHhcCCCeeEe
Q 017557 162 EEEFEMLFSSFKAKSLIFCALGSE-CVLKKDQFQELILGFELTGLPFFAALKPPTGHDTIESALPEGFEERVKGRGFVHG 240 (369)
Q Consensus 162 ~~~~~~~l~~~~~~~~v~vs~GS~-~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~ 240 (369)
..++-++|.+.+ ...|+.|.. + .+.+..++....+-++|=++..... ...++... -....+.
T Consensus 34 A~~lg~~LA~~G---~~vVsGGg~~G-----iM~aa~~gAl~~GG~tiGVlP~~~~----~~e~~~~~-----~~~~~~~ 96 (215)
T 2a33_A 34 AVDLGNELVSRN---IDLVYGGGSIG-----LMGLVSQAVHDGGRHVIGIIPKTLM----PRELTGET-----VGEVRAV 96 (215)
T ss_dssp HHHHHHHHHHTT---CEEEECCCSSH-----HHHHHHHHHHHTTCCEEEEEESSCC-----------------CCEEEEE
T ss_pred HHHHHHHHHHCC---CEEEECCChhh-----HhHHHHHHHHHcCCcEEEEcchHhc----chhhccCC-----CCceeec
Confidence 345666666543 666776654 3 2244444444455555555432211 01111100 0123344
Q ss_pred cccChHH-hh-cCCCccceeecCCCchHHHHHH---------hCCccccccc
Q 017557 241 GWVQQQL-IL-KHPSVGCFVTHCGSGSLSEAMV---------NECQLVLLPN 281 (369)
Q Consensus 241 ~~~pq~~-lL-~~~~~~~~ItHgG~~s~~Eal~---------~GvP~i~~P~ 281 (369)
...++.. ++ ..++ ..++--||.||+-|... +++|++.+-.
T Consensus 97 ~~f~~Rk~~~~~~sd-a~VvlpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 147 (215)
T 2a33_A 97 ADMHQRKAEMAKHSD-AFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 147 (215)
T ss_dssp SSHHHHHHHHHHTCS-EEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECG
T ss_pred CCHHHHHHHHHHhCC-EEEEeCCCCchHHHHHHHHHHHHhCCCCCCeEEecC
Confidence 5556543 33 3444 45677888999887762 4899988764
No 254
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=21.35 E-value=1.4e+02 Score=26.87 Aligned_cols=65 Identities=15% Similarity=0.148 Sum_probs=41.0
Q ss_pred CceEEEeeCCCccCCHHHHHHHHHHHHhcCCcEEEEECCCCCCCccccCCchhHHHHhcCCCeeEecccChHHhhcCCCc
Q 017557 175 KSLIFCALGSECVLKKDQFQELILGFELTGLPFFAALKPPTGHDTIESALPEGFEERVKGRGFVHGGWVQQQLILKHPSV 254 (369)
Q Consensus 175 ~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~v~~~~pq~~lL~~~~~ 254 (369)
+.+-.|.+|.++ ..+++.+...|.+++..-+... ... .+ . ....+....++++.+++
T Consensus 141 ~tvGIIGlG~IG-------~~vA~~l~~~G~~V~~~dr~~~-------~~~-~~-------~-~~~~~~~l~ell~~aDv 197 (324)
T 3hg7_A 141 RTLLILGTGSIG-------QHIAHTGKHFGMKVLGVSRSGR-------ERA-GF-------D-QVYQLPALNKMLAQADV 197 (324)
T ss_dssp CEEEEECCSHHH-------HHHHHHHHHTTCEEEEECSSCC-------CCT-TC-------S-EEECGGGHHHHHHTCSE
T ss_pred ceEEEEEECHHH-------HHHHHHHHhCCCEEEEEcCChH-------Hhh-hh-------h-cccccCCHHHHHhhCCE
Confidence 458899999998 6777777778888665432210 000 00 0 11234556778888888
Q ss_pred cceeecCCCc
Q 017557 255 GCFVTHCGSG 264 (369)
Q Consensus 255 ~~~ItHgG~~ 264 (369)
++.|+-.+
T Consensus 198 --V~l~lPlt 205 (324)
T 3hg7_A 198 --IVSVLPAT 205 (324)
T ss_dssp --EEECCCCC
T ss_pred --EEEeCCCC
Confidence 88887644
No 255
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=21.22 E-value=52 Score=25.04 Aligned_cols=56 Identities=11% Similarity=0.072 Sum_probs=33.7
Q ss_pred hCCcccccccccchhHHHHHHhhhcc-eEEEEeecCCCCccCHHHHHHHHHHHhccCCcchHHHHHHHH
Q 017557 272 NECQLVLLPNVGDQIINSRLMGEDLK-VGVEVERGDEDGLFTRDGVCKAVKAVMDDDSEVGKDARQNHA 339 (369)
Q Consensus 272 ~GvP~i~~P~~~DQ~~na~~v~~~~g-~G~~l~~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~a~ 339 (369)
..+|+|++--..+ ........+. | +--.+.+. ++.+.|.++|+.++. ...+++..+
T Consensus 78 ~~~~ii~ls~~~~-~~~~~~~~~~-g~~~~~l~kP-----~~~~~L~~~i~~~~~-----~~~~~~~~~ 134 (154)
T 2rjn_A 78 PDIERVVISGYAD-AQATIDAVNR-GKISRFLLKP-----WEDEDVFKVVEKGLQ-----LAFLREENL 134 (154)
T ss_dssp TTSEEEEEECGGG-HHHHHHHHHT-TCCSEEEESS-----CCHHHHHHHHHHHHH-----HHHHHHHTT
T ss_pred CCCcEEEEecCCC-HHHHHHHHhc-cchheeeeCC-----CCHHHHHHHHHHHHH-----HHHHHHHHH
Confidence 3567766643333 2333344444 5 54455553 799999999999997 555544433
No 256
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=21.14 E-value=1.7e+02 Score=24.67 Aligned_cols=47 Identities=6% Similarity=-0.014 Sum_probs=31.5
Q ss_pred hhHHHhhhccCCCCceEEEeeCCCccCCHHHHHHHHHHHHhcCCcEEEE
Q 017557 162 EEEFEMLFSSFKAKSLIFCALGSECVLKKDQFQELILGFELTGLPFFAA 210 (369)
Q Consensus 162 ~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~i~~ 210 (369)
.+.+.+|+.. ...+++|-.|+........+..+.++|+..+..++.+
T Consensus 21 ~~~l~~~~~~--~~~i~iI~~a~~~~~~~~~~~~~~~al~~lG~~~~~v 67 (229)
T 1fy2_A 21 LPLIANQLNG--RRSAVFIPFAGVTQTWDEYTDKTAEVLAPLGVNVTGI 67 (229)
T ss_dssp HHHHHHHHTT--CCEEEEECTTCCSSCHHHHHHHHHHHHGGGTCEEEET
T ss_pred HHHHHHHhcC--CCeEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEE
Confidence 4457777753 3459999888753334456778889998888764433
No 257
>2xdq_B Light-independent protochlorophyllide reductase S; oxidoreductase, DPOR, (bacterio)chlorophyll biosynthesis, photosynthesis; 2.40A {Thermosynechococcus elongatus}
Probab=20.69 E-value=65 Score=31.08 Aligned_cols=37 Identities=11% Similarity=0.222 Sum_probs=29.3
Q ss_pred HHHHHHHHhhcCCCEEEECCCCChHHHHHHhCCCeEEEe
Q 017557 8 EPAIEAIVRDIKPNIVFFDFTYWLPSLARKLGIKSIAFV 46 (369)
Q Consensus 8 ~~~l~~~l~~~~pD~vI~D~~~~~~~~A~~lgiP~v~~~ 46 (369)
..++++++++.+||++|.+. ....+|+++|||++.+.
T Consensus 361 ~~el~~~i~~~~pDl~ig~~--~~r~~a~k~gip~~~i~ 397 (511)
T 2xdq_B 361 HTVVGDAIARVEPAAIFGTQ--MERHVGKRLNIPCGVIA 397 (511)
T ss_dssp HHHHHHHHHHHCCSEEEECH--HHHHHHHHHTCCEEECS
T ss_pred HHHHHHHHHhcCCCEEEecc--chHHHHHhcCCCeEecc
Confidence 44788888888999999764 34567899999999854
No 258
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=20.62 E-value=84 Score=30.39 Aligned_cols=36 Identities=8% Similarity=0.091 Sum_probs=27.6
Q ss_pred HHHHHHHHhhcCCCEEEECCCCChHHHHHHh-------CCCeEEE
Q 017557 8 EPAIEAIVRDIKPNIVFFDFTYWLPSLARKL-------GIKSIAF 45 (369)
Q Consensus 8 ~~~l~~~l~~~~pD~vI~D~~~~~~~~A~~l-------giP~v~~ 45 (369)
..++++++++.+||++|.+. .+..+|+++ |||++.+
T Consensus 423 ~~~l~~~i~~~~pDLiig~~--~~~~~a~~~~~~g~~~gip~v~i 465 (519)
T 1qgu_B 423 LWHFRSLMFTRQPDFMIGNS--YGKFIQRDTLAKGKAFEVPLIRL 465 (519)
T ss_dssp HHHHHHHHHHHCCSEEEECG--GGHHHHHHHHHHCGGGCCCEEEC
T ss_pred HHHHHHHHhhcCCCEEEECc--chHHHHHHhhcccccCCCCeEEe
Confidence 34567778888999999886 236778888 9999764
No 259
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=20.46 E-value=1.5e+02 Score=23.93 Aligned_cols=39 Identities=15% Similarity=0.069 Sum_probs=0.0
Q ss_pred HHHHHHHhhc-------------CCCEEEECC---CCChHHHHHHh---------CCCeEEEeC
Q 017557 9 PAIEAIVRDI-------------KPNIVFFDF---TYWLPSLARKL---------GIKSIAFVT 47 (369)
Q Consensus 9 ~~l~~~l~~~-------------~pD~vI~D~---~~~~~~~A~~l---------giP~v~~~~ 47 (369)
....+.+++. +||+||.|. ..-+..+++.+ .+|.+.++.
T Consensus 96 ~eal~~l~~~~~~~~~~~~~~~~~~dlillD~~lp~~~G~el~~~lr~~~~~~~~~~piI~ls~ 159 (206)
T 3mm4_A 96 KEALRLVTEGLTQREEQGSVDKLPFDYIFMDCQMPEMDGYEATREIRKVEKSYGVRTPIIAVSG 159 (206)
T ss_dssp HHHHHHHHHHHHHHHHHTCSSCCSCSEEEEESCCSSSCHHHHHHHHHHHHHTTTCCCCEEEEES
T ss_pred HHHHHHHHhhcccccccccccCCCCCEEEEcCCCCCCCHHHHHHHHHhhhhhcCCCCcEEEEEC
No 260
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=20.36 E-value=59 Score=27.40 Aligned_cols=29 Identities=10% Similarity=-0.072 Sum_probs=23.6
Q ss_pred CCEEEECC-CCChHHHHHHhCCCeEEEeCc
Q 017557 20 PNIVFFDF-TYWLPSLARKLGIKSIAFVTV 48 (369)
Q Consensus 20 pD~vI~D~-~~~~~~~A~~lgiP~v~~~~~ 48 (369)
..+||+|- ...+...|+++|||+..+.+.
T Consensus 32 I~~Visn~~~a~v~~~A~~~gIp~~~~~~~ 61 (211)
T 3p9x_A 32 VALLITDKPGAKVVERVKVHEIPVCALDPK 61 (211)
T ss_dssp EEEEEESCSSSHHHHHHHTTTCCEEECCGG
T ss_pred EEEEEECCCCcHHHHHHHHcCCCEEEeChh
Confidence 56889997 666788999999999887653
No 261
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=20.05 E-value=2e+02 Score=21.01 Aligned_cols=32 Identities=16% Similarity=0.258 Sum_probs=22.1
Q ss_pred cCCCEEEECC-CC--ChHHHHHHh-------CCCeEEEeCch
Q 017557 18 IKPNIVFFDF-TY--WLPSLARKL-------GIKSIAFVTVS 49 (369)
Q Consensus 18 ~~pD~vI~D~-~~--~~~~~A~~l-------giP~v~~~~~~ 49 (369)
.+||+||.|. .+ -+..+.+.+ ++|.+.++...
T Consensus 61 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~t~~~ 102 (149)
T 1k66_A 61 PRPAVILLDLNLPGTDGREVLQEIKQDEVLKKIPVVIMTTSS 102 (149)
T ss_dssp CCCSEEEECSCCSSSCHHHHHHHHTTSTTGGGSCEEEEESCC
T ss_pred CCCcEEEEECCCCCCCHHHHHHHHHhCcccCCCeEEEEeCCC
Confidence 6899999998 54 455555553 47788776543
Done!