BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017558
(369 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 195 bits (495), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 99/194 (51%), Positives = 134/194 (69%), Gaps = 4/194 (2%)
Query: 179 QSPGMPVGNFKSTFTYEELKIATDNFSEANLLGQGGFGYVHKGVLTNGKVVAIKQLKAGS 238
+ P + +G K F+ EL++A+DNFS N+LG+GGFG V+KG L +G +VA+K+LK
Sbjct: 16 EDPEVHLGQLKR-FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEER 74
Query: 239 GQG-EREFQAEIEIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGK--DRP 295
QG E +FQ E+E+IS HR+L+ L G+C ++RLLVY ++ N ++ L + +P
Sbjct: 75 XQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQP 134
Query: 296 VMNWPTRMKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLD 355
++WP R +IALGSARGLAYLH+ C PKIIHRD+K+ANILLD+ FEA V DFGLAK
Sbjct: 135 PLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 194
Query: 356 TDTHVSTRVMGTFG 369
D HV V GT G
Sbjct: 195 KDXHVXXAVRGTIG 208
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 191 bits (484), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 97/194 (50%), Positives = 132/194 (68%), Gaps = 4/194 (2%)
Query: 179 QSPGMPVGNFKSTFTYEELKIATDNFSEANLLGQGGFGYVHKGVLTNGKVVAIKQLKAGS 238
+ P + +G K F+ EL++A+DNF N+LG+GGFG V+KG L +G +VA+K+LK
Sbjct: 8 EDPEVHLGQLKR-FSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEER 66
Query: 239 GQG-EREFQAEIEIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGK--DRP 295
QG E +FQ E+E+IS HR+L+ L G+C ++RLLVY ++ N ++ L + +P
Sbjct: 67 TQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQP 126
Query: 296 VMNWPTRMKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLD 355
++WP R +IALGSARGLAYLH+ C PKIIHRD+K+ANILLD+ FEA V DFGLAK
Sbjct: 127 PLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 186
Query: 356 TDTHVSTRVMGTFG 369
D HV V G G
Sbjct: 187 KDXHVXXAVRGXIG 200
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 144 bits (364), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 116/177 (65%), Gaps = 6/177 (3%)
Query: 196 ELKIATDNFSEANLLGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQV 255
+L+ AT+NF L+G G FG V+KGVL +G VA+K+ S QG EF+ EIE +S
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 256 HHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPV--MNWPTRMKIALGSARGL 313
H HLVSL+G+C ++ +L+Y+++ N L+ HL+G D P M+W R++I +G+ARGL
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 314 AYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTD-THVSTRVMGTFG 369
YLH IIHRD+KS NILLD++F K+ DFG++K + D TH+ V GT G
Sbjct: 153 HYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLG 206
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 141 bits (356), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 115/177 (64%), Gaps = 6/177 (3%)
Query: 196 ELKIATDNFSEANLLGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQV 255
+L+ AT+NF L+G G FG V+KGVL +G VA+K+ S QG EF+ EIE +S
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 256 HHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPV--MNWPTRMKIALGSARGL 313
H HLVSL+G+C ++ +L+Y+++ N L+ HL+G D P M+W R++I +G+ARGL
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 314 AYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDT-DTHVSTRVMGTFG 369
YLH IIHRD+KS NILLD++F K+ DFG++K + TH+ V GT G
Sbjct: 153 HYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLG 206
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 134 bits (337), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 78/189 (41%), Positives = 120/189 (63%), Gaps = 16/189 (8%)
Query: 191 TFTYEELKIATDNFSE------ANLLGQGGFGYVHKGVLTNGKVVAIKQLKA----GSGQ 240
+F++ ELK T+NF E N +G+GGFG V+KG + N VA+K+L A + +
Sbjct: 14 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEE 72
Query: 241 GEREFQAEIEIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKD-RPVMNW 299
+++F EI+++++ H +LV L+G+ + G LVY ++PN +L L D P ++W
Sbjct: 73 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSW 132
Query: 300 PTRMKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLD-TDT 358
R KIA G+A G+ +LHE+ IHRDIKSANILLD++F AK++DFGLA+ S T
Sbjct: 133 HMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQT 189
Query: 359 HVSTRVMGT 367
+ +R++GT
Sbjct: 190 VMXSRIVGT 198
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/189 (41%), Positives = 119/189 (62%), Gaps = 16/189 (8%)
Query: 191 TFTYEELKIATDNFSE------ANLLGQGGFGYVHKGVLTNGKVVAIKQLKA----GSGQ 240
+F++ ELK T+NF E N +G+GGFG V+KG + N VA+K+L A + +
Sbjct: 14 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEE 72
Query: 241 GEREFQAEIEIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKD-RPVMNW 299
+++F EI+++++ H +LV L+G+ + G LVY ++PN +L L D P ++W
Sbjct: 73 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSW 132
Query: 300 PTRMKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLD-TDT 358
R KIA G+A G+ +LHE+ IHRDIKSANILLD++F AK++DFGLA+ S T
Sbjct: 133 HMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQT 189
Query: 359 HVSTRVMGT 367
+ R++GT
Sbjct: 190 VMXXRIVGT 198
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 132 bits (331), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 78/189 (41%), Positives = 118/189 (62%), Gaps = 16/189 (8%)
Query: 191 TFTYEELKIATDNFSE------ANLLGQGGFGYVHKGVLTNGKVVAIKQLKA----GSGQ 240
+F++ ELK T+NF E N +G+GGFG V+KG + N VA+K+L A + +
Sbjct: 8 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEE 66
Query: 241 GEREFQAEIEIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKD-RPVMNW 299
+++F EI+++++ H +LV L+G+ + G LVY ++PN +L L D P ++W
Sbjct: 67 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSW 126
Query: 300 PTRMKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTH 359
R KIA G+A G+ +LHE+ IHRDIKSANILLD++F AK++DFGLA+ S
Sbjct: 127 HMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQX 183
Query: 360 V-STRVMGT 367
V R++GT
Sbjct: 184 VMXXRIVGT 192
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 129 bits (323), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/189 (41%), Positives = 116/189 (61%), Gaps = 16/189 (8%)
Query: 191 TFTYEELKIATDNFSE------ANLLGQGGFGYVHKGVLTNGKVVAIKQLKA----GSGQ 240
+F++ ELK T+NF E N G+GGFG V+KG + N VA+K+L A + +
Sbjct: 5 SFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEE 63
Query: 241 GEREFQAEIEIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKD-RPVMNW 299
+++F EI++ ++ H +LV L+G+ + G LVY + PN +L L D P ++W
Sbjct: 64 LKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSW 123
Query: 300 PTRMKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTH 359
R KIA G+A G+ +LHE+ IHRDIKSANILLD++F AK++DFGLA+ S
Sbjct: 124 HXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQX 180
Query: 360 V-STRVMGT 367
V +R++GT
Sbjct: 181 VXXSRIVGT 189
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 99/183 (54%), Gaps = 21/183 (11%)
Query: 199 IATDNFSEANLLGQGGFGYVHKGVLTNGK-VVAIKQLKAGSGQGE-------REFQAEIE 250
+A + +G+GGFG VHKG L K VVAIK L G +GE +EFQ E+
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 251 IISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSA 310
I+S ++H ++V L G + +V EFVP L L K P+ W ++++ L A
Sbjct: 76 IMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDKAHPI-KWSVKLRLMLDIA 132
Query: 311 RGLAYLHEDCQPKIIHRDIKSANILLDDSFE-----AKVADFGLAKHSLDTDTHVSTRVM 365
G+ Y+ ++ P I+HRD++S NI L E AKVADFGL++ S+ H + ++
Sbjct: 133 LGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSV----HSVSGLL 187
Query: 366 GTF 368
G F
Sbjct: 188 GNF 190
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 98/183 (53%), Gaps = 21/183 (11%)
Query: 199 IATDNFSEANLLGQGGFGYVHKGVLTNGK-VVAIKQLKAGSGQGE-------REFQAEIE 250
+A + +G+GGFG VHKG L K VVAIK L G +GE +EFQ E+
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 251 IISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSA 310
I+S ++H ++V L G + +V EFVP L L K P+ W ++++ L A
Sbjct: 76 IMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDKAHPI-KWSVKLRLMLDIA 132
Query: 311 RGLAYLHEDCQPKIIHRDIKSANILLDDSFE-----AKVADFGLAKHSLDTDTHVSTRVM 365
G+ Y+ ++ P I+HRD++S NI L E AKVADFG ++ S+ H + ++
Sbjct: 133 LGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSV----HSVSGLL 187
Query: 366 GTF 368
G F
Sbjct: 188 GNF 190
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 98/183 (53%), Gaps = 21/183 (11%)
Query: 199 IATDNFSEANLLGQGGFGYVHKGVLTNGK-VVAIKQLKAGSGQGE-------REFQAEIE 250
+A + +G+GGFG VHKG L K VVAIK L G +GE +EFQ E+
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 251 IISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSA 310
I+S ++H ++V L G + +V EFVP L L K P+ W ++++ L A
Sbjct: 76 IMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDKAHPI-KWSVKLRLMLDIA 132
Query: 311 RGLAYLHEDCQPKIIHRDIKSANILLDDSFE-----AKVADFGLAKHSLDTDTHVSTRVM 365
G+ Y+ ++ P I+HRD++S NI L E AKVADF L++ S+ H + ++
Sbjct: 133 LGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSV----HSVSGLL 187
Query: 366 GTF 368
G F
Sbjct: 188 GNF 190
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 81/153 (52%), Gaps = 5/153 (3%)
Query: 210 LGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLVGYCTF 269
+G G FG VH G N VAIK +K GS E +F E E++ ++ H LV L G C
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGS-MSEDDFIEEAEVMMKLSHPKLVQLYGVCLE 93
Query: 270 GSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRDI 329
+ LV+EF+ + L +L + R + T + + L G+AYL E C +IHRD+
Sbjct: 94 QAPICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDL 149
Query: 330 KSANILLDDSFEAKVADFGLAKHSLDTDTHVST 362
+ N L+ ++ KV+DFG+ + LD ST
Sbjct: 150 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSST 182
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 81/153 (52%), Gaps = 5/153 (3%)
Query: 210 LGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLVGYCTF 269
+G G FG VH G N VAIK ++ G+ E +F E E++ ++ H LV L G C
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 71
Query: 270 GSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRDI 329
+ LV+EF+ + L +L + R + T + + L G+AYL E C +IHRD+
Sbjct: 72 QAPICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDL 127
Query: 330 KSANILLDDSFEAKVADFGLAKHSLDTDTHVST 362
+ N L+ ++ KV+DFG+ + LD ST
Sbjct: 128 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSST 160
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 81/153 (52%), Gaps = 5/153 (3%)
Query: 210 LGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLVGYCTF 269
+G G FG VH G N VAIK ++ G+ E +F E E++ ++ H LV L G C
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 76
Query: 270 GSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRDI 329
+ LV+EF+ + L +L + R + T + + L G+AYL E C +IHRD+
Sbjct: 77 QAPICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDL 132
Query: 330 KSANILLDDSFEAKVADFGLAKHSLDTDTHVST 362
+ N L+ ++ KV+DFG+ + LD ST
Sbjct: 133 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSST 165
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 81/153 (52%), Gaps = 5/153 (3%)
Query: 210 LGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLVGYCTF 269
+G G FG VH G N VAIK ++ G+ E +F E E++ ++ H LV L G C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 270 GSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRDI 329
+ LV+EF+ + L +L + R + T + + L G+AYL E C +IHRD+
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDL 129
Query: 330 KSANILLDDSFEAKVADFGLAKHSLDTDTHVST 362
+ N L+ ++ KV+DFG+ + LD ST
Sbjct: 130 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSST 162
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 80/153 (52%), Gaps = 5/153 (3%)
Query: 210 LGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLVGYCTF 269
+G G FG VH G N VAIK ++ G+ E +F E E++ ++ H LV L G C
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 74
Query: 270 GSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRDI 329
+ LV EF+ + L +L + R + T + + L G+AYL E C +IHRD+
Sbjct: 75 QAPICLVTEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDL 130
Query: 330 KSANILLDDSFEAKVADFGLAKHSLDTDTHVST 362
+ N L+ ++ KV+DFG+ + LD ST
Sbjct: 131 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSST 163
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 80/153 (52%), Gaps = 5/153 (3%)
Query: 210 LGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLVGYCTF 269
+G G FG VH G N VAIK ++ G+ E +F E E++ ++ H LV L G C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 270 GSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRDI 329
+ LV+EF+ + L +L + R + T + + L G+AYL E +IHRD+
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEE---ASVIHRDL 129
Query: 330 KSANILLDDSFEAKVADFGLAKHSLDTDTHVST 362
+ N L+ ++ KV+DFG+ + LD ST
Sbjct: 130 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSST 162
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 87/167 (52%), Gaps = 5/167 (2%)
Query: 188 FKSTFTYEELKIATDNFSEANLLGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGER--EF 245
F+ +++ I + + +G G FG VH+ +G VA+K L ER EF
Sbjct: 23 FQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEF 81
Query: 246 QAEIEIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKD-RPVMNWPTRMK 304
E+ I+ ++ H ++V +G T +V E++ +L LH R ++ R+
Sbjct: 82 LREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLS 141
Query: 305 IALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+A A+G+ YLH + P I+HRD+KS N+L+D + KV DFGL++
Sbjct: 142 MAYDVAKGMNYLH-NRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSR 187
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 100/192 (52%), Gaps = 22/192 (11%)
Query: 186 GNFKSTFTY--EELKIATDNFSEANLLGQGGFGYVHKGVLTNGKV-------VAIKQLKA 236
G+F + Y +E ++A + + + LGQG FG V++GV G V VAIK +
Sbjct: 1 GSFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGV-AKGVVKDEPETRVAIKTVNE 59
Query: 237 GSGQGER-EFQAEIEIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHG---- 291
+ ER EF E ++ + + H+V L+G + G L++ E + L+ +L
Sbjct: 60 AASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE 119
Query: 292 -KDRPVMNWPT---RMKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADF 347
++ PV+ P+ +++A A G+AYL+ + K +HRD+ + N ++ + F K+ DF
Sbjct: 120 MENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDF 176
Query: 348 GLAKHSLDTDTH 359
G+ + +TD +
Sbjct: 177 GMTRDIYETDYY 188
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 93/179 (51%), Gaps = 7/179 (3%)
Query: 188 FKSTFTYEELKIATDNFSEANLLGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGER--EF 245
F+ +++ I + + +G G FG VH+ +G VA+K L ER EF
Sbjct: 23 FQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEF 81
Query: 246 QAEIEIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKD-RPVMNWPTRMK 304
E+ I+ ++ H ++V +G T +V E++ +L LH R ++ R+
Sbjct: 82 LREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLS 141
Query: 305 IALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTHVSTR 363
+A A+G+ YLH + P I+HR++KS N+L+D + KV DFGL++ L T +S++
Sbjct: 142 MAYDVAKGMNYLH-NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSR--LKASTFLSSK 197
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 99/190 (52%), Gaps = 22/190 (11%)
Query: 186 GNFKSTFTY--EELKIATDNFSEANLLGQGGFGYVHKGVLTNGKV-------VAIKQLKA 236
G+F + Y +E ++A + + + LGQG FG V++GV G V VAIK +
Sbjct: 1 GSFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGV-AKGVVKDEPETRVAIKTVNE 59
Query: 237 GSGQGER-EFQAEIEIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHG---- 291
+ ER EF E ++ + + H+V L+G + G L++ E + L+ +L
Sbjct: 60 AASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE 119
Query: 292 -KDRPVMNWPT---RMKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADF 347
++ PV+ P+ +++A A G+AYL+ + K +HRD+ + N ++ + F K+ DF
Sbjct: 120 MENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDF 176
Query: 348 GLAKHSLDTD 357
G+ + +TD
Sbjct: 177 GMTRDIXETD 186
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 96/185 (51%), Gaps = 20/185 (10%)
Query: 191 TFTYEELKIATDNFSEANLLGQGGFGYVHKGVLTNGKV-------VAIKQLKAGSGQGER 243
F +E ++A + + + LGQG FG V++GV G V VAIK + + ER
Sbjct: 5 VFVPDEWEVAREKITMSRELGQGSFGMVYEGV-AKGVVKDEPETRVAIKTVNEAASMRER 63
Query: 244 -EFQAEIEIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHG-----KDRPVM 297
EF E ++ + + H+V L+G + G L++ E + L+ +L ++ PV+
Sbjct: 64 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 123
Query: 298 NWPT---RMKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSL 354
P+ +++A A G+AYL+ + K +HRD+ + N ++ + F K+ DFG+ +
Sbjct: 124 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 180
Query: 355 DTDTH 359
+TD +
Sbjct: 181 ETDYY 185
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 95/181 (52%), Gaps = 20/181 (11%)
Query: 195 EELKIATDNFSEANLLGQGGFGYVHKGVLTNGKV-------VAIKQLKAGSGQGER-EFQ 246
+E ++A + + + LGQG FG V++GV G V VAIK + + ER EF
Sbjct: 18 DEWEVAREKITMSRELGQGSFGMVYEGV-AKGVVKDEPETRVAIKTVNEAASMRERIEFL 76
Query: 247 AEIEIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHG-----KDRPVMNWPT 301
E ++ + + H+V L+G + G L++ E + L+ +L ++ PV+ P+
Sbjct: 77 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 136
Query: 302 ---RMKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDT 358
+++A A G+AYL+ + K +HRD+ + N ++ + F K+ DFG+ + +TD
Sbjct: 137 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 193
Query: 359 H 359
+
Sbjct: 194 Y 194
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 95/181 (52%), Gaps = 20/181 (11%)
Query: 195 EELKIATDNFSEANLLGQGGFGYVHKGVLTNGKV-------VAIKQLKAGSGQGER-EFQ 246
+E ++A + + + LGQG FG V++GV G V VAIK + + ER EF
Sbjct: 11 DEWEVAREKITMSRELGQGSFGMVYEGV-AKGVVKDEPETRVAIKTVNEAASMRERIEFL 69
Query: 247 AEIEIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHG-----KDRPVMNWPT 301
E ++ + + H+V L+G + G L++ E + L+ +L ++ PV+ P+
Sbjct: 70 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 129
Query: 302 ---RMKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDT 358
+++A A G+AYL+ + K +HRD+ + N ++ + F K+ DFG+ + +TD
Sbjct: 130 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 186
Query: 359 H 359
+
Sbjct: 187 Y 187
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 94/181 (51%), Gaps = 20/181 (11%)
Query: 195 EELKIATDNFSEANLLGQGGFGYVHKGVLTNGKV-------VAIKQLKAGSGQGER-EFQ 246
+E ++A + + + LGQG FG V++GV G V VAIK + + ER EF
Sbjct: 18 DEWEVAREKITMSRELGQGSFGMVYEGV-AKGVVKDEPETRVAIKTVNEAASMRERIEFL 76
Query: 247 AEIEIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHG-----KDRPVMNWPT 301
E ++ + + H+V L+G + G L++ E + L+ +L + PV+ P+
Sbjct: 77 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPS 136
Query: 302 ---RMKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDT 358
+++A A G+AYL+ + K +HRD+ + N ++ + F K+ DFG+ + +TD
Sbjct: 137 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 193
Query: 359 H 359
+
Sbjct: 194 Y 194
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 95/181 (52%), Gaps = 20/181 (11%)
Query: 195 EELKIATDNFSEANLLGQGGFGYVHKGVLTNGKV-------VAIKQLKAGSGQGER-EFQ 246
+E ++A + + + LGQG FG V++GV G V VAIK + + ER EF
Sbjct: 11 DEWEVAREKITMSRELGQGSFGMVYEGV-AKGVVKDEPETRVAIKTVNEAASMRERIEFL 69
Query: 247 AEIEIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHG-----KDRPVMNWPT 301
E ++ + + H+V L+G + G L++ E + L+ +L ++ PV+ P+
Sbjct: 70 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 129
Query: 302 ---RMKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDT 358
+++A A G+AYL+ + K +HRD+ + N ++ + F K+ DFG+ + +TD
Sbjct: 130 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 186
Query: 359 H 359
+
Sbjct: 187 Y 187
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 95/181 (52%), Gaps = 20/181 (11%)
Query: 195 EELKIATDNFSEANLLGQGGFGYVHKGVLTNGKV-------VAIKQLKAGSGQGER-EFQ 246
+E ++A + + + LGQG FG V++GV G V VAIK + + ER EF
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEGV-AKGVVKDEPETRVAIKTVNEAASMRERIEFL 63
Query: 247 AEIEIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHG-----KDRPVMNWPT 301
E ++ + + H+V L+G + G L++ E + L+ +L ++ PV+ P+
Sbjct: 64 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 123
Query: 302 ---RMKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDT 358
+++A A G+AYL+ + K +HRD+ + N ++ + F K+ DFG+ + +TD
Sbjct: 124 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 180
Query: 359 H 359
+
Sbjct: 181 Y 181
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 95/181 (52%), Gaps = 20/181 (11%)
Query: 195 EELKIATDNFSEANLLGQGGFGYVHKGVLTNGKV-------VAIKQLKAGSGQGER-EFQ 246
+E ++A + + + LGQG FG V++GV G V VAIK + + ER EF
Sbjct: 40 DEWEVAREKITMSRELGQGSFGMVYEGV-AKGVVKDEPETRVAIKTVNEAASMRERIEFL 98
Query: 247 AEIEIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHG-----KDRPVMNWPT 301
E ++ + + H+V L+G + G L++ E + L+ +L ++ PV+ P+
Sbjct: 99 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 158
Query: 302 ---RMKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDT 358
+++A A G+AYL+ + K +HRD+ + N ++ + F K+ DFG+ + +TD
Sbjct: 159 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 215
Query: 359 H 359
+
Sbjct: 216 Y 216
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 94/179 (52%), Gaps = 20/179 (11%)
Query: 195 EELKIATDNFSEANLLGQGGFGYVHKGVLTNGKV-------VAIKQLKAGSGQGER-EFQ 246
+E ++A + + + LGQG FG V++GV G V VAIK + + ER EF
Sbjct: 3 DEWEVAREKITMSRELGQGSFGMVYEGV-AKGVVKDEPETRVAIKTVNEAASMRERIEFL 61
Query: 247 AEIEIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHG-----KDRPVMNWPT 301
E ++ + + H+V L+G + G L++ E + L+ +L ++ PV+ P+
Sbjct: 62 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 121
Query: 302 ---RMKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTD 357
+++A A G+AYL+ + K +HRD+ + N ++ + F K+ DFG+ + +TD
Sbjct: 122 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETD 177
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 94/181 (51%), Gaps = 20/181 (11%)
Query: 195 EELKIATDNFSEANLLGQGGFGYVHKGVLTNGKV-------VAIKQLKAGSGQGER-EFQ 246
+E ++A + + + LGQG FG V++GV G V VAIK + + ER EF
Sbjct: 8 DEWEVAREKITMSRELGQGSFGMVYEGV-AKGVVKDEPETRVAIKTVNEAASMRERIEFL 66
Query: 247 AEIEIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHG-----KDRPVMNWPT 301
E ++ + + H+V L+G + G L++ E + L+ +L + PV+ P+
Sbjct: 67 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPS 126
Query: 302 ---RMKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDT 358
+++A A G+AYL+ + K +HRD+ + N ++ + F K+ DFG+ + +TD
Sbjct: 127 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 183
Query: 359 H 359
+
Sbjct: 184 Y 184
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 94/181 (51%), Gaps = 20/181 (11%)
Query: 195 EELKIATDNFSEANLLGQGGFGYVHKGVLTNGKV-------VAIKQLKAGSGQGER-EFQ 246
+E ++A + + + LGQG FG V++GV G V VAIK + + ER EF
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEGV-AKGVVKDEPETRVAIKTVNEAASMRERIEFL 63
Query: 247 AEIEIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHG-----KDRPVMNWPT 301
E ++ + + H+V L+G + G L++ E + L+ +L ++ PV+ P+
Sbjct: 64 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 123
Query: 302 ---RMKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDT 358
+++A A G+AYL+ + K +HRD+ + N + + F K+ DFG+ + +TD
Sbjct: 124 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDY 180
Query: 359 H 359
+
Sbjct: 181 Y 181
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 81/160 (50%), Gaps = 9/160 (5%)
Query: 210 LGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLVGYCTF 269
LGQG FG V G VAIK LK G+ E F E +++ ++ H LV L Y
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL--YAVV 331
Query: 270 GSQRL-LVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRD 328
+ + +V E++ +L L G+ + P + +A A G+AY+ + +HRD
Sbjct: 332 SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 388
Query: 329 IKSANILLDDSFEAKVADFGLAKHSLDTDTHVSTRVMGTF 368
+++ANIL+ ++ KVADFGLA+ L D + R F
Sbjct: 389 LRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKF 426
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 78/149 (52%), Gaps = 7/149 (4%)
Query: 210 LGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLVGYCTF 269
LGQG FG V G VAIK LK G+ E F E +++ ++ H LV L Y
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL--YAVV 72
Query: 270 GSQRL-LVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRD 328
+ + +V E++ +L L G+ + P + +A A G+AY+ + +HRD
Sbjct: 73 SEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 129
Query: 329 IKSANILLDDSFEAKVADFGLAKHSLDTD 357
+++ANIL+ ++ KVADFGLA+ D +
Sbjct: 130 LRAANILVGENLVCKVADFGLARLIEDNE 158
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 78/149 (52%), Gaps = 7/149 (4%)
Query: 210 LGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLVGYCTF 269
LGQG FG V G VAIK LK G+ E F E +++ ++ H LV L Y
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL--YAVV 75
Query: 270 GSQRL-LVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRD 328
+ + +V E++ +L L G+ + P + +A A G+AY+ + +HRD
Sbjct: 76 SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 132
Query: 329 IKSANILLDDSFEAKVADFGLAKHSLDTD 357
+++ANIL+ ++ KVADFGLA+ D +
Sbjct: 133 LRAANILVGENLVCKVADFGLARLIEDNE 161
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 78/149 (52%), Gaps = 7/149 (4%)
Query: 210 LGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLVGYCTF 269
LGQG FG V G VAIK LK G+ E F E +++ ++ H LV L Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKIRHEKLVQL--YAVV 82
Query: 270 GSQRL-LVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRD 328
+ + +V E++ +L L G+ + P + +A A G+AY+ + +HRD
Sbjct: 83 SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 139
Query: 329 IKSANILLDDSFEAKVADFGLAKHSLDTD 357
+++ANIL+ ++ KVADFGLA+ D +
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNE 168
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 78/149 (52%), Gaps = 7/149 (4%)
Query: 210 LGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLVGYCTF 269
LGQG FG V G VAIK LK G+ E F E +++ ++ H LV L Y
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL--YAVV 248
Query: 270 GSQRL-LVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRD 328
+ + +V E++ +L L G+ + P + +A A G+AY+ + +HRD
Sbjct: 249 SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 305
Query: 329 IKSANILLDDSFEAKVADFGLAKHSLDTD 357
+++ANIL+ ++ KVADFGLA+ D +
Sbjct: 306 LRAANILVGENLVCKVADFGLARLIEDNE 334
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 78/149 (52%), Gaps = 7/149 (4%)
Query: 210 LGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLVGYCTF 269
LGQG FG V G VAIK LK G+ E F E +++ ++ H LV L Y
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL--YAVV 248
Query: 270 GSQRL-LVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRD 328
+ + +V E++ +L L G+ + P + +A A G+AY+ + +HRD
Sbjct: 249 SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 305
Query: 329 IKSANILLDDSFEAKVADFGLAKHSLDTD 357
+++ANIL+ ++ KVADFGLA+ D +
Sbjct: 306 LRAANILVGENLVCKVADFGLARLIEDNE 334
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 88/161 (54%), Gaps = 13/161 (8%)
Query: 210 LGQGGFGYVHKGVL-----TNGKVVAIKQLKAGSGQGE-REFQAEIEIISQVHHRHLVSL 263
LG+G FG V G+ VA+K LK SG + + EIEI+ ++H ++V
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 264 VGYCTF--GSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQ 321
G CT G+ L+ EF+P+ +L+ +L K++ +N ++K A+ +G+ YL
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYL-PKNKNKINLKQQLKYAVQICKGMDYLG---S 144
Query: 322 PKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTHVST 362
+ +HRD+ + N+L++ + K+ DFGL K +++TD T
Sbjct: 145 RQYVHRDLAARNVLVESEHQVKIGDFGLTK-AIETDKEXXT 184
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 78/149 (52%), Gaps = 7/149 (4%)
Query: 210 LGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLVGYCTF 269
LGQG FG V G VAIK LK G+ E F E +++ ++ H LV L Y
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL--YAVV 73
Query: 270 GSQRL-LVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRD 328
+ + +V E++ +L L G+ + P + +A A G+AY+ + +HRD
Sbjct: 74 SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 130
Query: 329 IKSANILLDDSFEAKVADFGLAKHSLDTD 357
+++ANIL+ ++ KVADFGLA+ D +
Sbjct: 131 LRAANILVGENLVCKVADFGLARLIEDNE 159
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 78/149 (52%), Gaps = 7/149 (4%)
Query: 210 LGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLVGYCTF 269
LGQG FG V G VAIK LK G+ E F E +++ ++ H LV L Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL--YAVV 82
Query: 270 GSQRL-LVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRD 328
+ + +V E++ +L L G+ + P + +A A G+AY+ + +HRD
Sbjct: 83 SEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 139
Query: 329 IKSANILLDDSFEAKVADFGLAKHSLDTD 357
+++ANIL+ ++ KVADFGLA+ D +
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNE 168
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 88/161 (54%), Gaps = 13/161 (8%)
Query: 210 LGQGGFGYVHKGVL-----TNGKVVAIKQLKAGSGQGE-REFQAEIEIISQVHHRHLVSL 263
LG+G FG V G+ VA+K LK SG + + EIEI+ ++H ++V
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 264 VGYCTF--GSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQ 321
G CT G+ L+ EF+P+ +L+ +L K++ +N ++K A+ +G+ YL
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYL-PKNKNKINLKQQLKYAVQICKGMDYLG---S 132
Query: 322 PKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTHVST 362
+ +HRD+ + N+L++ + K+ DFGL K +++TD T
Sbjct: 133 RQYVHRDLAARNVLVESEHQVKIGDFGLTK-AIETDKEXXT 172
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 78/149 (52%), Gaps = 7/149 (4%)
Query: 210 LGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLVGYCTF 269
LGQG FG V G VAIK LK G+ E F E +++ ++ H LV L Y
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL--YAVV 71
Query: 270 GSQRL-LVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRD 328
+ + +V E++ +L L G+ + P + +A A G+AY+ + +HRD
Sbjct: 72 SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 128
Query: 329 IKSANILLDDSFEAKVADFGLAKHSLDTD 357
+++ANIL+ ++ KVADFGLA+ D +
Sbjct: 129 LRAANILVGENLVCKVADFGLARLIEDNE 157
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 78/149 (52%), Gaps = 7/149 (4%)
Query: 210 LGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLVGYCTF 269
LGQG FG V G VAIK LK G+ E F E +++ ++ H LV L Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL--YAVV 82
Query: 270 GSQRL-LVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRD 328
+ + +V E++ +L L G+ + P + +A A G+AY+ + +HRD
Sbjct: 83 SEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 139
Query: 329 IKSANILLDDSFEAKVADFGLAKHSLDTD 357
+++ANIL+ ++ KVADFGLA+ D +
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNE 168
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 78/149 (52%), Gaps = 7/149 (4%)
Query: 210 LGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLVGYCTF 269
LGQG FG V G VAIK LK G+ E F E +++ ++ H LV L Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL--YAVV 82
Query: 270 GSQRL-LVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRD 328
+ + +V E++ +L L G+ + P + +A A G+AY+ + +HRD
Sbjct: 83 SEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 139
Query: 329 IKSANILLDDSFEAKVADFGLAKHSLDTD 357
+++ANIL+ ++ KVADFGLA+ D +
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNE 168
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 80/167 (47%), Gaps = 20/167 (11%)
Query: 210 LGQGGFGYVHKGVLTN------GKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSL 263
LG+G FG V N +VA+K LK S ++F E E+++ + H H+V
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 264 VGYCTFGSQRLLVYEFVPNKTLEFHL--HGKDRPVM---NWPTRMK------IALGSARG 312
G C G ++V+E++ + L L HG D +M N PT + IA A G
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAG 140
Query: 313 LAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTH 359
+ YL +HRD+ + N L+ ++ K+ DFG+++ TD +
Sbjct: 141 MVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYY 184
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 77/149 (51%), Gaps = 7/149 (4%)
Query: 210 LGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLVGYCTF 269
LGQG FG V G VAIK LK G+ E F E +++ ++ H LV L Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL--YAVV 82
Query: 270 GSQRL-LVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRD 328
+ + +V E++ L L G+ + P + +A A G+AY+ + +HRD
Sbjct: 83 SEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 139
Query: 329 IKSANILLDDSFEAKVADFGLAKHSLDTD 357
+++ANIL+ ++ KVADFGLA+ D +
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNE 168
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 78/149 (52%), Gaps = 7/149 (4%)
Query: 210 LGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLVGYCTF 269
LGQG FG V G VAIK LK G+ E F E +++ ++ H LV L Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL--YAVV 82
Query: 270 GSQRL-LVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRD 328
+ + +V E++ +L L G+ + P + +A A G+AY+ + +HRD
Sbjct: 83 SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 139
Query: 329 IKSANILLDDSFEAKVADFGLAKHSLDTD 357
+++ANIL+ ++ KVADFGLA+ D +
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNE 168
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 78/149 (52%), Gaps = 7/149 (4%)
Query: 210 LGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLVGYCTF 269
LGQG FG V G VAIK LK G+ E F E +++ ++ H LV L Y
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL--YAVV 248
Query: 270 GSQRL-LVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRD 328
+ + +V E++ +L L G+ + P + +A A G+AY+ + +HRD
Sbjct: 249 SEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 305
Query: 329 IKSANILLDDSFEAKVADFGLAKHSLDTD 357
+++ANIL+ ++ KVADFGLA+ D +
Sbjct: 306 LRAANILVGENLVCKVADFGLARLIEDNE 334
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 79/163 (48%), Gaps = 5/163 (3%)
Query: 195 EELKIATDNFSEANLLGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQ 254
+E ++ + LG G FG V G VA+K LK GS + F AE ++ Q
Sbjct: 12 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQ 70
Query: 255 VHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLA 314
+ H+ LV L T ++ E++ N +L L + + +A A G+A
Sbjct: 71 LQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 129
Query: 315 YLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTD 357
++ E IHRD+++ANIL+ D+ K+ADFGLA+ D +
Sbjct: 130 FIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 169
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 79/163 (48%), Gaps = 5/163 (3%)
Query: 195 EELKIATDNFSEANLLGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQ 254
+E ++ + LG G FG V G VA+K LK GS + F AE ++ Q
Sbjct: 14 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQ 72
Query: 255 VHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLA 314
+ H+ LV L T ++ E++ N +L L + + +A A G+A
Sbjct: 73 LQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 131
Query: 315 YLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTD 357
++ E IHRD+++ANIL+ D+ K+ADFGLA+ D +
Sbjct: 132 FIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 171
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 79/163 (48%), Gaps = 5/163 (3%)
Query: 195 EELKIATDNFSEANLLGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQ 254
+E ++ + LG G FG V G VA+K LK GS + F AE ++ Q
Sbjct: 15 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQ 73
Query: 255 VHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLA 314
+ H+ LV L T ++ E++ N +L L + + +A A G+A
Sbjct: 74 LQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 132
Query: 315 YLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTD 357
++ E IHRD+++ANIL+ D+ K+ADFGLA+ D +
Sbjct: 133 FIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 172
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 79/163 (48%), Gaps = 5/163 (3%)
Query: 195 EELKIATDNFSEANLLGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQ 254
+E ++ + LG G FG V G VA+K LK GS + F AE ++ Q
Sbjct: 16 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQ 74
Query: 255 VHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLA 314
+ H+ LV L T ++ E++ N +L L + + +A A G+A
Sbjct: 75 LQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 133
Query: 315 YLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTD 357
++ E IHRD+++ANIL+ D+ K+ADFGLA+ D +
Sbjct: 134 FIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 173
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 77/149 (51%), Gaps = 7/149 (4%)
Query: 210 LGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLVGYCTF 269
LGQG FG V G VAIK LK G+ E F E +++ ++ H LV L Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL--YAVV 82
Query: 270 GSQRL-LVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRD 328
+ + +V E++ L L G+ + P + +A A G+AY+ + +HRD
Sbjct: 83 SEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 139
Query: 329 IKSANILLDDSFEAKVADFGLAKHSLDTD 357
+++ANIL+ ++ KVADFGLA+ D +
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNE 168
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 79/163 (48%), Gaps = 5/163 (3%)
Query: 195 EELKIATDNFSEANLLGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQ 254
+E ++ + LG G FG V G VA+K LK GS + F AE ++ Q
Sbjct: 12 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQ 70
Query: 255 VHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLA 314
+ H+ LV L T ++ E++ N +L L + + +A A G+A
Sbjct: 71 LQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 129
Query: 315 YLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTD 357
++ E IHRD+++ANIL+ D+ K+ADFGLA+ D +
Sbjct: 130 FIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 169
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 77/150 (51%), Gaps = 14/150 (9%)
Query: 210 LGQGGFGYVHKGVL--TN---GKVVAIKQLKAGSG-QGEREFQAEIEIISQVHHRHLVSL 263
LG+G FG V TN G++VA+K LK G G Q +Q EIEI+ ++H H+V
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 264 VGYCTFGSQR--LLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQ 321
G C ++ LV E+VP +L +L R + + A G+AYLH
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYL---PRHCVGLAQLLLFAQQICEGMAYLHAQ-- 131
Query: 322 PKIIHRDIKSANILLDDSFEAKVADFGLAK 351
IHR + + N+LLD+ K+ DFGLAK
Sbjct: 132 -HYIHRALAARNVLLDNDRLVKIGDFGLAK 160
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 79/163 (48%), Gaps = 5/163 (3%)
Query: 195 EELKIATDNFSEANLLGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQ 254
+E ++ + LG G FG V G VA+K LK GS + F AE ++ Q
Sbjct: 6 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQ 64
Query: 255 VHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLA 314
+ H+ LV L T ++ E++ N +L L + + +A A G+A
Sbjct: 65 LQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 123
Query: 315 YLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTD 357
++ E IHRD+++ANIL+ D+ K+ADFGLA+ D +
Sbjct: 124 FIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 163
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 79/163 (48%), Gaps = 5/163 (3%)
Query: 195 EELKIATDNFSEANLLGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQ 254
+E ++ + LG G FG V G VA+K LK GS + F AE ++ Q
Sbjct: 11 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQ 69
Query: 255 VHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLA 314
+ H+ LV L T ++ E++ N +L L + + +A A G+A
Sbjct: 70 LQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 128
Query: 315 YLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTD 357
++ E IHRD+++ANIL+ D+ K+ADFGLA+ D +
Sbjct: 129 FIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 168
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 77/150 (51%), Gaps = 14/150 (9%)
Query: 210 LGQGGFGYVHKGVL--TN---GKVVAIKQLKAGSG-QGEREFQAEIEIISQVHHRHLVSL 263
LG+G FG V TN G++VA+K LK G G Q +Q EIEI+ ++H H+V
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 264 VGYCTFGSQR--LLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQ 321
G C ++ LV E+VP +L +L R + + A G+AYLH
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYL---PRHCVGLAQLLLFAQQICEGMAYLHAQ-- 130
Query: 322 PKIIHRDIKSANILLDDSFEAKVADFGLAK 351
IHR + + N+LLD+ K+ DFGLAK
Sbjct: 131 -HYIHRALAARNVLLDNDRLVKIGDFGLAK 159
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 79/163 (48%), Gaps = 5/163 (3%)
Query: 195 EELKIATDNFSEANLLGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQ 254
+E ++ + LG G FG V G VA+K LK GS + F AE ++ Q
Sbjct: 8 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQ 66
Query: 255 VHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLA 314
+ H+ LV L T ++ E++ N +L L + + +A A G+A
Sbjct: 67 LQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 125
Query: 315 YLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTD 357
++ E IHRD+++ANIL+ D+ K+ADFGLA+ D +
Sbjct: 126 FIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 165
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 78/149 (52%), Gaps = 7/149 (4%)
Query: 210 LGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLVGYCTF 269
LGQG FG V G VAIK LK G+ E F E +++ ++ H LV L Y
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL--YAVV 79
Query: 270 GSQRL-LVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRD 328
+ + +V E++ +L L G+ + P + ++ A G+AY+ + +HRD
Sbjct: 80 SEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE---RMNYVHRD 136
Query: 329 IKSANILLDDSFEAKVADFGLAKHSLDTD 357
+++ANIL+ ++ KVADFGLA+ D +
Sbjct: 137 LRAANILVGENLVCKVADFGLARLIEDNE 165
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 78/149 (52%), Gaps = 7/149 (4%)
Query: 210 LGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLVGYCTF 269
LGQG FG V G VAIK LK G+ E F E +++ ++ H LV L Y
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL--YAVV 79
Query: 270 GSQRL-LVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRD 328
+ + +V E++ +L L G+ + P + ++ A G+AY+ + +HRD
Sbjct: 80 SEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE---RMNYVHRD 136
Query: 329 IKSANILLDDSFEAKVADFGLAKHSLDTD 357
+++ANIL+ ++ KVADFGLA+ D +
Sbjct: 137 LRAANILVGENLVCKVADFGLARLIEDNE 165
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 72/141 (51%), Gaps = 5/141 (3%)
Query: 210 LGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLVGYCTF 269
+G G FG V+KG V + + A + Q + F+ E+ ++ + H +++ +GY T
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST- 90
Query: 270 GSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRDI 329
Q +V ++ +L HLH + + IA +ARG+ YLH IIHRD+
Sbjct: 91 APQLAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGMDYLHA---KSIIHRDL 146
Query: 330 KSANILLDDSFEAKVADFGLA 350
KS NI L + K+ DFGLA
Sbjct: 147 KSNNIFLHEDNTVKIGDFGLA 167
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 79/163 (48%), Gaps = 5/163 (3%)
Query: 195 EELKIATDNFSEANLLGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQ 254
+E ++ + LG G FG V G VA+K LK GS + F AE ++ Q
Sbjct: 7 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQ 65
Query: 255 VHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLA 314
+ H+ LV L T ++ E++ N +L L + + +A A G+A
Sbjct: 66 LQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 124
Query: 315 YLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTD 357
++ E IHRD+++ANIL+ D+ K+ADFGLA+ D +
Sbjct: 125 FIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 164
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 79/163 (48%), Gaps = 5/163 (3%)
Query: 195 EELKIATDNFSEANLLGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQ 254
+E ++ + LG G FG V G VA+K LK GS + F AE ++ Q
Sbjct: 6 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQ 64
Query: 255 VHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLA 314
+ H+ LV L T ++ E++ N +L L + + +A A G+A
Sbjct: 65 LQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 123
Query: 315 YLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTD 357
++ E IHRD+++ANIL+ D+ K+ADFGLA+ D +
Sbjct: 124 FIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 163
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 79/163 (48%), Gaps = 5/163 (3%)
Query: 195 EELKIATDNFSEANLLGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQ 254
+E ++ + LG G FG V G VA+K LK GS + F AE ++ Q
Sbjct: 6 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQ 64
Query: 255 VHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLA 314
+ H+ LV L T ++ E++ N +L L + + +A A G+A
Sbjct: 65 LQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 123
Query: 315 YLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTD 357
++ E IHRD+++ANIL+ D+ K+ADFGLA+ D +
Sbjct: 124 FIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 163
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 77/149 (51%), Gaps = 7/149 (4%)
Query: 210 LGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLVGYCTF 269
LGQG FG V G VAIK LK G+ E F E +++ ++ H LV L Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL--YAVV 82
Query: 270 GSQRL-LVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRD 328
+ + +V E++ +L L G+ + P + +A A G+AY+ + +HRD
Sbjct: 83 SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 139
Query: 329 IKSANILLDDSFEAKVADFGLAKHSLDTD 357
+ +ANIL+ ++ KVADFGLA+ D +
Sbjct: 140 LAAANILVGENLVCKVADFGLARLIEDNE 168
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 77/156 (49%), Gaps = 5/156 (3%)
Query: 195 EELKIATDNFSEANLLGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQ 254
++ +I + +G G FG V+KG V + + A + Q + F+ E+ ++ +
Sbjct: 17 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK 76
Query: 255 VHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLA 314
H +++ +GY T Q +V ++ +L HLH + + IA +ARG+
Sbjct: 77 TRHVNILLFMGYST-KPQLAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGMD 134
Query: 315 YLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
YLH IIHRD+KS NI L + K+ DFGLA
Sbjct: 135 YLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLA 167
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 79/163 (48%), Gaps = 5/163 (3%)
Query: 195 EELKIATDNFSEANLLGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQ 254
+E ++ + LG G FG V G VA+K LK GS + F AE ++ Q
Sbjct: 1 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQ 59
Query: 255 VHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLA 314
+ H+ LV L T ++ E++ N +L L + + +A A G+A
Sbjct: 60 LQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 118
Query: 315 YLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTD 357
++ E IHRD+++ANIL+ D+ K+ADFGLA+ D +
Sbjct: 119 FIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 158
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 80/150 (53%), Gaps = 14/150 (9%)
Query: 210 LGQGGFGYVHKGVL--TN---GKVVAIKQLKAGSGQGERE-FQAEIEIISQVHHRHLVSL 263
LG+G FG V TN G++VA+K LKA +G R ++ EI+I+ ++H H++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 264 VGYCT-FGSQRL-LVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQ 321
G C G+ L LV E+VP +L +L R + + A G+AYLH
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLRDYL---PRHSIGLAQLLLFAQQICEGMAYLHAQ-- 153
Query: 322 PKIIHRDIKSANILLDDSFEAKVADFGLAK 351
IHRD+ + N+LLD+ K+ DFGLAK
Sbjct: 154 -HYIHRDLAARNVLLDNDRLVKIGDFGLAK 182
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 77/156 (49%), Gaps = 5/156 (3%)
Query: 195 EELKIATDNFSEANLLGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQ 254
++ +I + +G G FG V+KG V + + A + Q + F+ E+ ++ +
Sbjct: 5 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK 64
Query: 255 VHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLA 314
H +++ +GY T Q +V ++ +L HLH + + IA +ARG+
Sbjct: 65 TRHVNILLFMGYST-KPQLAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGMD 122
Query: 315 YLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
YLH IIHRD+KS NI L + K+ DFGLA
Sbjct: 123 YLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLA 155
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 78/149 (52%), Gaps = 11/149 (7%)
Query: 210 LGQGGFGYVHKGVL-----TNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLV 264
LG+G FG V G+VVA+K+L+ + + R+F+ EIEI+ + H ++V
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 265 GYCTFGSQR--LLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQP 322
G C +R L+ EF+P +L +L K + ++ ++ +G+ YL
Sbjct: 81 GVCYSAGRRNLKLIMEFLPYGSLREYLQ-KHKERIDHIKLLQYTSQICKGMEYLG---TK 136
Query: 323 KIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ IHRD+ + NIL+++ K+ DFGL K
Sbjct: 137 RYIHRDLATRNILVENENRVKIGDFGLTK 165
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 81/176 (46%), Gaps = 23/176 (13%)
Query: 210 LGQGGFGYVHKGVLTN------GKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSL 263
LG+G FG V N +VA+K LK S ++FQ E E+++ + H+H+V
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 264 VGYCTFGSQRLLVYEFVPNKTLEFHL--HGKDRPV-----------MNWPTRMKIALGSA 310
G CT G L+V+E++ + L L HG D + + + +A A
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 311 RGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTH-VSTRVM 365
G+ YL +HRD+ + N L+ K+ DFG+++ TD + V R M
Sbjct: 169 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTM 221
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 105/211 (49%), Gaps = 27/211 (12%)
Query: 173 DKPFPRQSPGMPVGN--FKSTFTY-EELK-----IATDNFSEANL-LGQGGFGYVHKGVL 223
DKP P MP+ F+S F+ EELK + DN A++ LG G FG V +GV
Sbjct: 303 DKPRP-----MPMDTSVFESPFSDPEELKDKKLFLKRDNLLIADIELGCGNFGSVRQGVY 357
Query: 224 TNGKV---VAIKQLKAGSGQGE-REFQAEIEIISQVHHRHLVSLVGYCTFGSQRLLVYEF 279
K VAIK LK G+ + + E E +I+ Q+ + ++V L+G C +LV E
Sbjct: 358 RMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ-AEALMLVMEM 416
Query: 280 VPNKTLEFHLHGK--DRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRDIKSANILLD 337
L L GK + PV N ++ + G+ YL E +HR++ + N+LL
Sbjct: 417 AGGGPLHKFLVGKREEIPVSN---VAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLV 470
Query: 338 DSFEAKVADFGLAKHSLDTDTHVSTRVMGTF 368
+ AK++DFGL+K D++ + R G +
Sbjct: 471 NRHYAKISDFGLSKALGADDSYYTARSAGKW 501
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 77/149 (51%), Gaps = 7/149 (4%)
Query: 210 LGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLVGYCTF 269
LGQG FG V G VAIK LK G+ E F E +++ ++ H LV L Y
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPE-AFLQEAQVMKKLRHEKLVQL--YAVV 249
Query: 270 GSQRL-LVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRD 328
+ + +V E++ +L L G+ + P + +A A G+AY+ + +HRD
Sbjct: 250 SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 306
Query: 329 IKSANILLDDSFEAKVADFGLAKHSLDTD 357
+++ANIL+ ++ KVADFGL + D +
Sbjct: 307 LRAANILVGENLVCKVADFGLGRLIEDNE 335
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 89/168 (52%), Gaps = 22/168 (13%)
Query: 196 ELKIATDN-FSEANLLGQGGFGYVHKGVLT-NGKVV----AIKQLKAGSG-QGEREFQAE 248
+L+I + +LG G FG V+KG+ G+ V AIK L +G + EF E
Sbjct: 31 QLRILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDE 90
Query: 249 IEIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHG-KD----RPVMNWPTRM 303
I++ + H HLV L+G C + +L V + +P+ L ++H KD + ++NW ++
Sbjct: 91 ALIMASMDHPHLVRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQI 149
Query: 304 KIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
A+G+ YL E +++HRD+ + N+L+ K+ DFGLA+
Sbjct: 150 ------AKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLAR 188
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 81/176 (46%), Gaps = 23/176 (13%)
Query: 210 LGQGGFGYVHKGVLTN------GKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSL 263
LG+G FG V N +VA+K LK S ++FQ E E+++ + H+H+V
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 264 VGYCTFGSQRLLVYEFVPNKTLEFHL--HGKDRPV-----------MNWPTRMKIALGSA 310
G CT G L+V+E++ + L L HG D + + + +A A
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 311 RGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTH-VSTRVM 365
G+ YL +HRD+ + N L+ K+ DFG+++ TD + V R M
Sbjct: 140 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTM 192
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 81/176 (46%), Gaps = 23/176 (13%)
Query: 210 LGQGGFGYVHKGVLTN------GKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSL 263
LG+G FG V N +VA+K LK S ++FQ E E+++ + H+H+V
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 264 VGYCTFGSQRLLVYEFVPNKTLEFHL--HGKDRPV-----------MNWPTRMKIALGSA 310
G CT G L+V+E++ + L L HG D + + + +A A
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 311 RGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTH-VSTRVM 365
G+ YL +HRD+ + N L+ K+ DFG+++ TD + V R M
Sbjct: 146 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTM 198
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 81/171 (47%), Gaps = 22/171 (12%)
Query: 197 LKIATDNFSEANLLGQGGFGYVHKGVLTNGKVVAIKQLK----AGSGQGEREFQAEIEII 252
L+I + ++G GGFG V++ G VA+K + Q + E ++
Sbjct: 2 LEIDFAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLF 60
Query: 253 SQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRP---VMNWPTRMKIALGS 309
+ + H ++++L G C LV EF L L GK P ++NW ++
Sbjct: 61 AMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQI------ 114
Query: 310 ARGLAYLHEDCQPKIIHRDIKSANILLDDSFE--------AKVADFGLAKH 352
ARG+ YLH++ IIHRD+KS+NIL+ E K+ DFGLA+
Sbjct: 115 ARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLARE 165
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 6/154 (3%)
Query: 210 LGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLVGYCTF 269
LG G FG V G VAIK +K GS E EF E +++ + H LV L G CT
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 270 GSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRDI 329
++ E++ N L +L + R +++ + YL + +HRD+
Sbjct: 76 QRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDL 131
Query: 330 KSANILLDDSFEAKVADFGLAKHSLDTDTHVSTR 363
+ N L++D KV+DFGL+++ LD D + S+R
Sbjct: 132 AARNCLVNDQGVVKVSDFGLSRYVLD-DEYTSSR 164
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 78/149 (52%), Gaps = 11/149 (7%)
Query: 210 LGQGGFGYVHKGVL-----TNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLV 264
LG+G FG V G+VVA+K+L+ + + R+F+ EIEI+ + H ++V
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 265 GYCTFGSQR--LLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQP 322
G C +R L+ E++P +L +L K + ++ ++ +G+ YL
Sbjct: 109 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLG---TK 164
Query: 323 KIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ IHRD+ + NIL+++ K+ DFGL K
Sbjct: 165 RYIHRDLATRNILVENENRVKIGDFGLTK 193
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 78/149 (52%), Gaps = 11/149 (7%)
Query: 210 LGQGGFGYVHKGVL-----TNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLV 264
LG+G FG V G+VVA+K+L+ + + R+F+ EIEI+ + H ++V
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 265 GYCTFGSQR--LLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQP 322
G C +R L+ E++P +L +L K + ++ ++ +G+ YL
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLG---TK 136
Query: 323 KIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ IHRD+ + NIL+++ K+ DFGL K
Sbjct: 137 RYIHRDLATRNILVENENRVKIGDFGLTK 165
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 89/168 (52%), Gaps = 22/168 (13%)
Query: 196 ELKIATD-NFSEANLLGQGGFGYVHKGVLT-NGKVV----AIKQLKAGSG-QGEREFQAE 248
+L+I + +LG G FG V+KG+ G+ V AIK L +G + EF E
Sbjct: 8 QLRILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDE 67
Query: 249 IEIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHG-KD----RPVMNWPTRM 303
I++ + H HLV L+G C + +L V + +P+ L ++H KD + ++NW ++
Sbjct: 68 ALIMASMDHPHLVRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQI 126
Query: 304 KIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
A+G+ YL E +++HRD+ + N+L+ K+ DFGLA+
Sbjct: 127 ------AKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLAR 165
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 100/195 (51%), Gaps = 25/195 (12%)
Query: 180 SPGMPVGNFKSTFTYEELKIATDNFSEA---------NLLGQGGFGYVHKGVLTN-GK-- 227
+PGM + F FT+E+ A F++ ++G G FG V G L GK
Sbjct: 4 TPGMKI--FIDPFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKRE 61
Query: 228 -VVAIKQLKAGSGQGER-EFQAEIEIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTL 285
VAIK LK+G + +R +F +E I+ Q H +++ L G T + +++ EF+ N +L
Sbjct: 62 IFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSL 121
Query: 286 EFHLHGKDR--PVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAK 343
+ L D V+ ++ G A G+ YL + +HRD+ + NIL++ + K
Sbjct: 122 DSFLRQNDGQFTVIQLVGMLR---GIAAGMKYLAD---MNYVHRDLAARNILVNSNLVCK 175
Query: 344 VADFGLAKHSLDTDT 358
V+DFGL++ L+ DT
Sbjct: 176 VSDFGLSRF-LEDDT 189
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 78/149 (52%), Gaps = 11/149 (7%)
Query: 210 LGQGGFGYVHKGVL-----TNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLV 264
LG+G FG V G+VVA+K+L+ + + R+F+ EIEI+ + H ++V
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 265 GYCTFGSQR--LLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQP 322
G C +R L+ E++P +L +L K + ++ ++ +G+ YL
Sbjct: 77 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLG---TK 132
Query: 323 KIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ IHRD+ + NIL+++ K+ DFGL K
Sbjct: 133 RYIHRDLATRNILVENENRVKIGDFGLTK 161
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 78/149 (52%), Gaps = 11/149 (7%)
Query: 210 LGQGGFGYVHKGVL-----TNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLV 264
LG+G FG V G+VVA+K+L+ + + R+F+ EIEI+ + H ++V
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 265 GYCTFGSQR--LLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQP 322
G C +R L+ E++P +L +L K + ++ ++ +G+ YL
Sbjct: 85 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLG---TK 140
Query: 323 KIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ IHRD+ + NIL+++ K+ DFGL K
Sbjct: 141 RYIHRDLATRNILVENENRVKIGDFGLTK 169
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 78/149 (52%), Gaps = 11/149 (7%)
Query: 210 LGQGGFGYVHKGVL-----TNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLV 264
LG+G FG V G+VVA+K+L+ + + R+F+ EIEI+ + H ++V
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 265 GYCTFGSQR--LLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQP 322
G C +R L+ E++P +L +L K + ++ ++ +G+ YL
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLG---TK 133
Query: 323 KIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ IHRD+ + NIL+++ K+ DFGL K
Sbjct: 134 RYIHRDLATRNILVENENRVKIGDFGLTK 162
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 78/149 (52%), Gaps = 11/149 (7%)
Query: 210 LGQGGFGYVHKGVL-----TNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLV 264
LG+G FG V G+VVA+K+L+ + + R+F+ EIEI+ + H ++V
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 265 GYCTFGSQR--LLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQP 322
G C +R L+ E++P +L +L K + ++ ++ +G+ YL
Sbjct: 76 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLG---TK 131
Query: 323 KIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ IHRD+ + NIL+++ K+ DFGL K
Sbjct: 132 RYIHRDLATRNILVENENRVKIGDFGLTK 160
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 78/161 (48%), Gaps = 11/161 (6%)
Query: 210 LGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLVGYCTF 269
LG G FG V G VAIK LK G+ E F E +I+ ++ H LV L Y
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPE-SFLEEAQIMKKLKHDKLVQL--YAVV 73
Query: 270 GSQRLLVYEFVPNK--TLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHR 327
+ + + NK L+F G+ R + P + +A A G+AY+ + IHR
Sbjct: 74 SEEPIYIVTEYMNKGSLLDFLKDGEGR-ALKLPNLVDMAAQVAAGMAYIE---RMNYIHR 129
Query: 328 DIKSANILLDDSFEAKVADFGLAKHSLDTDTHVSTRVMGTF 368
D++SANIL+ + K+ADFGLA+ L D + R F
Sbjct: 130 DLRSANILVGNGLICKIADFGLAR--LIEDNEXTARQGAKF 168
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 78/149 (52%), Gaps = 11/149 (7%)
Query: 210 LGQGGFGYVHKGVL-----TNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLV 264
LG+G FG V G+VVA+K+L+ + + R+F+ EIEI+ + H ++V
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 265 GYCTFGSQR--LLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQP 322
G C +R L+ E++P +L +L K + ++ ++ +G+ YL
Sbjct: 83 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLG---TK 138
Query: 323 KIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ IHRD+ + NIL+++ K+ DFGL K
Sbjct: 139 RYIHRDLATRNILVENENRVKIGDFGLTK 167
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 78/149 (52%), Gaps = 11/149 (7%)
Query: 210 LGQGGFGYVHKGVL-----TNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLV 264
LG+G FG V G+VVA+K+L+ + + R+F+ EIEI+ + H ++V
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 265 GYCTFGSQR--LLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQP 322
G C +R L+ E++P +L +L K + ++ ++ +G+ YL
Sbjct: 82 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLG---TK 137
Query: 323 KIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ IHRD+ + NIL+++ K+ DFGL K
Sbjct: 138 RYIHRDLATRNILVENENRVKIGDFGLTK 166
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 78/149 (52%), Gaps = 11/149 (7%)
Query: 210 LGQGGFGYVHKGVL-----TNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLV 264
LG+G FG V G+VVA+K+L+ + + R+F+ EIEI+ + H ++V
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 265 GYCTFGSQR--LLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQP 322
G C +R L+ E++P +L +L K + ++ ++ +G+ YL
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLG---TK 133
Query: 323 KIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ IHRD+ + NIL+++ K+ DFGL K
Sbjct: 134 RYIHRDLATRNILVENENRVKIGDFGLTK 162
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 78/149 (52%), Gaps = 11/149 (7%)
Query: 210 LGQGGFGYVHKGVL-----TNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLV 264
LG+G FG V G+VVA+K+L+ + + R+F+ EIEI+ + H ++V
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 265 GYCTFGSQR--LLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQP 322
G C +R L+ E++P +L +L K + ++ ++ +G+ YL
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLG---TK 133
Query: 323 KIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ IHRD+ + NIL+++ K+ DFGL K
Sbjct: 134 RYIHRDLATRNILVENENRVKIGDFGLTK 162
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 78/149 (52%), Gaps = 11/149 (7%)
Query: 210 LGQGGFGYVHKGVL-----TNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLV 264
LG+G FG V G+VVA+K+L+ + + R+F+ EIEI+ + H ++V
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 265 GYCTFGSQR--LLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQP 322
G C +R L+ E++P +L +L K + ++ ++ +G+ YL
Sbjct: 84 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLG---TK 139
Query: 323 KIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ IHRD+ + NIL+++ K+ DFGL K
Sbjct: 140 RYIHRDLATRNILVENENRVKIGDFGLTK 168
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 83/151 (54%), Gaps = 14/151 (9%)
Query: 209 LLGQGGFGYVHKGVL--TNGKV---VAIKQLKAGSGQGER-EFQAEIEIISQVHHRHLVS 262
++G G FG V+KG+L ++GK VAIK LKAG + +R +F E I+ Q H +++
Sbjct: 51 VIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIR 110
Query: 263 LVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDR--PVMNWPTRMKIALGSARGLAYLHEDC 320
L G + +++ E++ N L+ L KD V+ ++ G A G+ YL
Sbjct: 111 LEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLR---GIAAGMKYL---A 164
Query: 321 QPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+HRD+ + NIL++ + KV+DFGL++
Sbjct: 165 NMNYVHRDLAARNILVNSNLVCKVSDFGLSR 195
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 78/149 (52%), Gaps = 11/149 (7%)
Query: 210 LGQGGFGYVHKGVL-----TNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLV 264
LG+G FG V G+VVA+K+L+ + + R+F+ EIEI+ + H ++V
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 265 GYCTFGSQR--LLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQP 322
G C +R L+ E++P +L +L K + ++ ++ +G+ YL
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLG---TK 151
Query: 323 KIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ IHRD+ + NIL+++ K+ DFGL K
Sbjct: 152 RYIHRDLATRNILVENENRVKIGDFGLTK 180
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 72/148 (48%), Gaps = 4/148 (2%)
Query: 210 LGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLVGYCTF 269
LG G FG V G N VA+K LK G+ + F E ++ + H LV L T
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTK 78
Query: 270 GSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRDI 329
++ EF+ +L L + + P + + A G+AY+ + IHRD+
Sbjct: 79 EEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHRDL 135
Query: 330 KSANILLDDSFEAKVADFGLAKHSLDTD 357
++AN+L+ +S K+ADFGLA+ D +
Sbjct: 136 RAANVLVSESLMCKIADFGLARVIEDNE 163
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 78/149 (52%), Gaps = 11/149 (7%)
Query: 210 LGQGGFGYVHKGVL-----TNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLV 264
LG+G FG V G+VVA+K+L+ + + R+F+ EIEI+ + H ++V
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 265 GYCTFGSQR--LLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQP 322
G C +R L+ E++P +L +L K + ++ ++ +G+ YL
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLG---TK 151
Query: 323 KIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ IHRD+ + NIL+++ K+ DFGL K
Sbjct: 152 RYIHRDLATRNILVENENRVKIGDFGLTK 180
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 78/150 (52%), Gaps = 14/150 (9%)
Query: 210 LGQGGFGYVHKGVL--TN---GKVVAIKQLKAGSGQGERE-FQAEIEIISQVHHRHLVSL 263
LG+G FG V TN G++VA+K LKA G R ++ EI+I+ ++H H++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 264 VGYCTFGSQR--LLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQ 321
G C ++ LV E+VP +L +L R + + A G+AYLH
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL---PRHSIGLAQLLLFAQQICEGMAYLHSQ-- 136
Query: 322 PKIIHRDIKSANILLDDSFEAKVADFGLAK 351
IHR++ + N+LLD+ K+ DFGLAK
Sbjct: 137 -HYIHRNLAARNVLLDNDRLVKIGDFGLAK 165
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 85/160 (53%), Gaps = 14/160 (8%)
Query: 200 ATDNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGE-REFQAEIEIISQVHH 257
++ F + LG G + V+KG+ T G VA+K++K S +G EI ++ ++ H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 258 RHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGS------AR 311
++V L ++ LV+EF+ N + + R V N P +++ L +
Sbjct: 63 ENIVRLYDVIHTENKLTLVFEFMDN---DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQ 119
Query: 312 GLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
GLA+ HE+ KI+HRD+K N+L++ + K+ DFGLA+
Sbjct: 120 GLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLAR 156
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 89/185 (48%), Gaps = 18/185 (9%)
Query: 190 STFTYEELKIATDNFSEANLLGQGGFGYVHKG---VLTNGKV---VAIKQLKAGSGQGER 243
S F +E +++ + + LGQG FG V++G + G+ VA+K + + ER
Sbjct: 5 SVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRER 64
Query: 244 -EFQAEIEIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTR 302
EF E ++ H+V L+G + G L+V E + + L+ +L N P R
Sbjct: 65 IEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR 124
Query: 303 --------MKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSL 354
+++A A G+AYL+ K +HRD+ + N ++ F K+ DFG+ +
Sbjct: 125 PPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIY 181
Query: 355 DTDTH 359
+TD +
Sbjct: 182 ETDYY 186
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 88/183 (48%), Gaps = 18/183 (9%)
Query: 190 STFTYEELKIATDNFSEANLLGQGGFGYVHKG---VLTNGKV---VAIKQLKAGSGQGER 243
S F +E +++ + + LGQG FG V++G + G+ VA+K + + ER
Sbjct: 5 SVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRER 64
Query: 244 -EFQAEIEIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTR 302
EF E ++ H+V L+G + G L+V E + + L+ +L N P R
Sbjct: 65 IEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR 124
Query: 303 --------MKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSL 354
+++A A G+AYL+ K +HRD+ + N ++ F K+ DFG+ +
Sbjct: 125 PPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIX 181
Query: 355 DTD 357
+TD
Sbjct: 182 ETD 184
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 78/162 (48%), Gaps = 5/162 (3%)
Query: 196 ELKIATDNFSEANLLGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQV 255
E ++ + LG G FG V G VA+K LK GS + F AE ++ Q+
Sbjct: 3 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQL 61
Query: 256 HHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAY 315
H+ LV L T ++ E++ N +L L + + +A A G+A+
Sbjct: 62 QHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 120
Query: 316 LHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTD 357
+ E IHR++++ANIL+ D+ K+ADFGLA+ D +
Sbjct: 121 IEER---NYIHRNLRAANILVSDTLSCKIADFGLARLIEDNE 159
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 77/156 (49%), Gaps = 5/156 (3%)
Query: 195 EELKIATDNFSEANLLGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQ 254
++ +I + +G G FG V+KG V + + A + Q + F+ E+ ++ +
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK 60
Query: 255 VHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLA 314
H +++ +GY T Q +V ++ +L HLH + + IA +A+G+
Sbjct: 61 TRHVNILLFMGYST-APQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMD 118
Query: 315 YLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
YLH IIHRD+KS NI L + K+ DFGLA
Sbjct: 119 YLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLA 151
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 78/150 (52%), Gaps = 14/150 (9%)
Query: 210 LGQGGFGYVHKGVL--TN---GKVVAIKQLKAGSGQGERE-FQAEIEIISQVHHRHLVSL 263
LG+G FG V TN G++VA+K LKA G R ++ EI+I+ ++H H++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 264 VGYCTFGSQR--LLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQ 321
G C ++ LV E+VP +L +L R + + A G+AYLH
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL---PRHSIGLAQLLLFAQQICEGMAYLHAQ-- 136
Query: 322 PKIIHRDIKSANILLDDSFEAKVADFGLAK 351
IHR++ + N+LLD+ K+ DFGLAK
Sbjct: 137 -HYIHRNLAARNVLLDNDRLVKIGDFGLAK 165
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 88/183 (48%), Gaps = 18/183 (9%)
Query: 190 STFTYEELKIATDNFSEANLLGQGGFGYVHKG---VLTNGKV---VAIKQLKAGSGQGER 243
S F +E +++ + + LGQG FG V++G + G+ VA+K + + ER
Sbjct: 2 SVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRER 61
Query: 244 -EFQAEIEIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTR 302
EF E ++ H+V L+G + G L+V E + + L+ +L N P R
Sbjct: 62 IEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR 121
Query: 303 --------MKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSL 354
+++A A G+AYL+ K +HRD+ + N ++ F K+ DFG+ +
Sbjct: 122 PPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIX 178
Query: 355 DTD 357
+TD
Sbjct: 179 ETD 181
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 84/159 (52%), Gaps = 5/159 (3%)
Query: 194 YEELKIATDNFSEANLLGQGGFGYVHKGVLTNGKV-VAIKQLKAGSGQGEREFQAEIEII 252
Y++ ++ + + + LG G +G V++GV + VA+K LK + + E EF E ++
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 68
Query: 253 SQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARG 312
++ H +LV L+G CT ++ EF+ L +L +R +N + +A +
Sbjct: 69 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 128
Query: 313 LAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ YL + IHRD+ + N L+ ++ KVADFGL++
Sbjct: 129 MEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSR 164
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 90/163 (55%), Gaps = 13/163 (7%)
Query: 196 ELKIATDNFSEANLLGQGGFGYVHKGVLTN-GKVVAIKQLKAG----SGQG-EREFQAEI 249
++K + + + LG+G F V+K N ++VAIK++K G + G R EI
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREI 63
Query: 250 EIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK-IALG 308
+++ ++ H +++ L+ S LV++F+ + + KD ++ P+ +K L
Sbjct: 64 KLLQELSHPNIIGLLDAFGHKSNISLVFDFMET---DLEVIIKDNSLVLTPSHIKAYMLM 120
Query: 309 SARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ +GL YLH Q I+HRD+K N+LLD++ K+ADFGLAK
Sbjct: 121 TLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAK 160
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 75/153 (49%), Gaps = 6/153 (3%)
Query: 210 LGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLVGYCTF 269
LG G FG V G VAIK +K GS E EF E +++ + H LV L G CT
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 270 GSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRDI 329
++ E++ N L +L + R +++ + YL + +HRD+
Sbjct: 91 QRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDL 146
Query: 330 KSANILLDDSFEAKVADFGLAKHSLDTDTHVST 362
+ N L++D KV+DFGL+++ LD D + S+
Sbjct: 147 AARNCLVNDQGVVKVSDFGLSRYVLD-DEYTSS 178
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 72/148 (48%), Gaps = 5/148 (3%)
Query: 210 LGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLVGYCTF 269
LG G FG V G VAIK +K GS E EF E +++ + H LV L G CT
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 270 GSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRDI 329
++ E++ N L +L + R +++ + YL + +HRD+
Sbjct: 91 QRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDL 146
Query: 330 KSANILLDDSFEAKVADFGLAKHSLDTD 357
+ N L++D KV+DFGL+++ LD +
Sbjct: 147 AARNCLVNDQGVVKVSDFGLSRYVLDDE 174
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 84/159 (52%), Gaps = 5/159 (3%)
Query: 194 YEELKIATDNFSEANLLGQGGFGYVHKGVLTNGKV-VAIKQLKAGSGQGEREFQAEIEII 252
Y++ ++ + + + LG G +G V++GV + VA+K LK + + E EF E ++
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 68
Query: 253 SQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARG 312
++ H +LV L+G CT ++ EF+ L +L +R +N + +A +
Sbjct: 69 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 128
Query: 313 LAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ YL + IHRD+ + N L+ ++ KVADFGL++
Sbjct: 129 MEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSR 164
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 8/167 (4%)
Query: 184 PVGNFKSTFTYEELKIATDNFSEANLLGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGER 243
P G S++ +E I + +G G FG V+KG V I ++ + + +
Sbjct: 21 PRGQRDSSYYWE---IEASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQ 77
Query: 244 EFQAEIEIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRM 303
F+ E+ ++ + H +++ +GY T +V ++ +L HLH ++ + +
Sbjct: 78 AFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQWCEGSSLYKHLHVQETKFQMFQL-I 135
Query: 304 KIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
IA +A+G+ YLH IIHRD+KS NI L + K+ DFGLA
Sbjct: 136 DIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGLA 179
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 77/156 (49%), Gaps = 5/156 (3%)
Query: 195 EELKIATDNFSEANLLGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQ 254
++ +I + +G G FG V+KG V + + A + Q + F+ E+ ++ +
Sbjct: 6 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK 65
Query: 255 VHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLA 314
H +++ +GY T Q +V ++ +L HLH + + IA +A+G+
Sbjct: 66 TRHVNILLFMGYST-KPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMD 123
Query: 315 YLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
YLH IIHRD+KS NI L + K+ DFGLA
Sbjct: 124 YLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLA 156
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 84/159 (52%), Gaps = 5/159 (3%)
Query: 194 YEELKIATDNFSEANLLGQGGFGYVHKGVLTNGKV-VAIKQLKAGSGQGEREFQAEIEII 252
Y++ ++ + + + LG G +G V++GV + VA+K LK + + E EF E ++
Sbjct: 6 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 64
Query: 253 SQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARG 312
++ H +LV L+G CT ++ EF+ L +L +R +N + +A +
Sbjct: 65 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 124
Query: 313 LAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ YL + IHRD+ + N L+ ++ KVADFGL++
Sbjct: 125 MEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSR 160
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 84/159 (52%), Gaps = 5/159 (3%)
Query: 194 YEELKIATDNFSEANLLGQGGFGYVHKGVLTNGKV-VAIKQLKAGSGQGEREFQAEIEII 252
Y++ ++ + + + LG G +G V++GV + VA+K LK + + E EF E ++
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 68
Query: 253 SQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARG 312
++ H +LV L+G CT ++ EF+ L +L +R +N + +A +
Sbjct: 69 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 128
Query: 313 LAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ YL + IHRD+ + N L+ ++ KVADFGL++
Sbjct: 129 MEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSR 164
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 77/156 (49%), Gaps = 5/156 (3%)
Query: 195 EELKIATDNFSEANLLGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQ 254
++ +I + +G G FG V+KG V + + A + Q + F+ E+ ++ +
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK 60
Query: 255 VHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLA 314
H +++ +GY T Q +V ++ +L HLH + + IA +A+G+
Sbjct: 61 TRHVNILLFMGYST-KPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMD 118
Query: 315 YLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
YLH IIHRD+KS NI L + K+ DFGLA
Sbjct: 119 YLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLA 151
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 77/156 (49%), Gaps = 5/156 (3%)
Query: 195 EELKIATDNFSEANLLGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQ 254
++ +I + +G G FG V+KG V + + A + Q + F+ E+ ++ +
Sbjct: 21 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK 80
Query: 255 VHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLA 314
H +++ +GY T Q +V ++ +L HLH + + IA +A+G+
Sbjct: 81 TRHVNILLFMGYST-KPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMD 138
Query: 315 YLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
YLH IIHRD+KS NI L + K+ DFGLA
Sbjct: 139 YLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLA 171
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 77/156 (49%), Gaps = 5/156 (3%)
Query: 195 EELKIATDNFSEANLLGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQ 254
++ +I + +G G FG V+KG V + + A + Q + F+ E+ ++ +
Sbjct: 6 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK 65
Query: 255 VHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLA 314
H +++ +GY T Q +V ++ +L HLH + + IA +A+G+
Sbjct: 66 TRHVNILLFMGYST-KPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMD 123
Query: 315 YLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
YLH IIHRD+KS NI L + K+ DFGLA
Sbjct: 124 YLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLA 156
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 77/156 (49%), Gaps = 5/156 (3%)
Query: 195 EELKIATDNFSEANLLGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQ 254
++ +I + +G G FG V+KG V + + A + Q + F+ E+ ++ +
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK 60
Query: 255 VHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLA 314
H +++ +GY T Q +V ++ +L HLH + + IA +A+G+
Sbjct: 61 TRHVNILLFMGYST-KPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMD 118
Query: 315 YLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
YLH IIHRD+KS NI L + K+ DFGLA
Sbjct: 119 YLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLA 151
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 87/165 (52%), Gaps = 5/165 (3%)
Query: 188 FKSTFTYEELKIATDNFSEANLLGQGGFGYVHKGVLTNGKV-VAIKQLKAGSGQGEREFQ 246
F+ + Y++ ++ + + + LG G +G V++GV + VA+K LK + + E EF
Sbjct: 12 FQGSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFL 70
Query: 247 AEIEIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIA 306
E ++ ++ H +LV L+G CT ++ EF+ L +L +R +N + +A
Sbjct: 71 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMA 130
Query: 307 LGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ + YL + IHRD+ + N L+ ++ KVADFGL++
Sbjct: 131 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSR 172
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 84/163 (51%), Gaps = 22/163 (13%)
Query: 208 NLLGQGGFGYVHKGVLTNGKV---VAIKQLKA-GSGQGEREFQAEIEIISQV-HHRHLVS 262
+++G+G FG V K + + AIK++K S R+F E+E++ ++ HH ++++
Sbjct: 21 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 80
Query: 263 LVGYCTFGSQRLLVYEFVP----------NKTLE----FHLHGKDRPVMNWPTRMKIALG 308
L+G C L E+ P ++ LE F + ++ + A
Sbjct: 81 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 140
Query: 309 SARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
ARG+ YL Q + IHRD+ + NIL+ +++ AK+ADFGL++
Sbjct: 141 VARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSR 180
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 77/156 (49%), Gaps = 5/156 (3%)
Query: 195 EELKIATDNFSEANLLGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQ 254
++ +I + +G G FG V+KG V + + A + Q + F+ E+ ++ +
Sbjct: 3 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK 62
Query: 255 VHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLA 314
H +++ +GY T Q +V ++ +L HLH + + IA +A+G+
Sbjct: 63 TRHVNILLFMGYST-KPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMD 120
Query: 315 YLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
YLH IIHRD+KS NI L + K+ DFGLA
Sbjct: 121 YLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLA 153
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 72/148 (48%), Gaps = 4/148 (2%)
Query: 210 LGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLVGYCTF 269
LG G FG V G N VA+K LK G+ + F E ++ + H LV L T
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTR 79
Query: 270 GSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRDI 329
++ E++ +L L + + P + + A G+AY+ + IHRD+
Sbjct: 80 EEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHRDL 136
Query: 330 KSANILLDDSFEAKVADFGLAKHSLDTD 357
++AN+L+ +S K+ADFGLA+ D +
Sbjct: 137 RAANVLVSESLMCKIADFGLARVIEDNE 164
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 77/156 (49%), Gaps = 5/156 (3%)
Query: 195 EELKIATDNFSEANLLGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQ 254
++ +I + +G G FG V+KG V + + A + Q + F+ E+ ++ +
Sbjct: 28 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK 87
Query: 255 VHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLA 314
H +++ +GY T Q +V ++ +L HLH + + IA +A+G+
Sbjct: 88 TRHVNILLFMGYST-KPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMD 145
Query: 315 YLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
YLH IIHRD+KS NI L + K+ DFGLA
Sbjct: 146 YLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLA 178
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 84/159 (52%), Gaps = 5/159 (3%)
Query: 194 YEELKIATDNFSEANLLGQGGFGYVHKGVLTNGKV-VAIKQLKAGSGQGEREFQAEIEII 252
Y++ ++ + + + LG G +G V++GV + VA+K LK + + E EF E ++
Sbjct: 9 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 67
Query: 253 SQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARG 312
++ H +LV L+G CT ++ EF+ L +L +R +N + +A +
Sbjct: 68 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 127
Query: 313 LAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ YL + IHRD+ + N L+ ++ KVADFGL++
Sbjct: 128 MEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSR 163
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 84/163 (51%), Gaps = 22/163 (13%)
Query: 208 NLLGQGGFGYVHKGVLTNGKV---VAIKQLKA-GSGQGEREFQAEIEIISQV-HHRHLVS 262
+++G+G FG V K + + AIK++K S R+F E+E++ ++ HH ++++
Sbjct: 31 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 90
Query: 263 LVGYCTFGSQRLLVYEFVP----------NKTLE----FHLHGKDRPVMNWPTRMKIALG 308
L+G C L E+ P ++ LE F + ++ + A
Sbjct: 91 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 150
Query: 309 SARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
ARG+ YL Q + IHRD+ + NIL+ +++ AK+ADFGL++
Sbjct: 151 VARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSR 190
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 77/156 (49%), Gaps = 5/156 (3%)
Query: 195 EELKIATDNFSEANLLGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQ 254
++ +I + +G G FG V+KG V + + A + Q + F+ E+ ++ +
Sbjct: 29 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK 88
Query: 255 VHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLA 314
H +++ +GY T Q +V ++ +L HLH + + IA +A+G+
Sbjct: 89 TRHVNILLFMGYST-KPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMD 146
Query: 315 YLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
YLH IIHRD+KS NI L + K+ DFGLA
Sbjct: 147 YLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLA 179
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 77/156 (49%), Gaps = 5/156 (3%)
Query: 195 EELKIATDNFSEANLLGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQ 254
++ +I + +G G FG V+KG V + + A + Q + F+ E+ ++ +
Sbjct: 29 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK 88
Query: 255 VHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLA 314
H +++ +GY T Q +V ++ +L HLH + + IA +A+G+
Sbjct: 89 TRHVNILLFMGYST-KPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMD 146
Query: 315 YLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
YLH IIHRD+KS NI L + K+ DFGLA
Sbjct: 147 YLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLA 179
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 84/159 (52%), Gaps = 5/159 (3%)
Query: 194 YEELKIATDNFSEANLLGQGGFGYVHKGVLTNGKV-VAIKQLKAGSGQGEREFQAEIEII 252
Y++ ++ + + + LG G +G V++GV + VA+K LK + + E EF E ++
Sbjct: 6 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 64
Query: 253 SQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARG 312
++ H +LV L+G CT ++ EF+ L +L +R +N + +A +
Sbjct: 65 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 124
Query: 313 LAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ YL + IHRD+ + N L+ ++ KVADFGL++
Sbjct: 125 MEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSR 160
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 79/156 (50%), Gaps = 12/156 (7%)
Query: 210 LGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLVGYCTF 269
LG G FG V G VA+K +K GS E EF E + + ++ H LV G C+
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSK 74
Query: 270 GSQRLLVYEFVPNKTLEFHL--HGKDRPVMNWPTRM-KIALGSARGLAYLHEDCQPKIIH 326
+V E++ N L +L HGK P+++ ++ G+A+L + IH
Sbjct: 75 EYPIYIVTEYISNGCLLNYLRSHGKGLE----PSQLLEMCYDVCEGMAFLESH---QFIH 127
Query: 327 RDIKSANILLDDSFEAKVADFGLAKHSLDTDTHVST 362
RD+ + N L+D KV+DFG+ ++ LD D +VS+
Sbjct: 128 RDLAARNCLVDRDLCVKVSDFGMTRYVLD-DQYVSS 162
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 88/183 (48%), Gaps = 18/183 (9%)
Query: 190 STFTYEELKIATDNFSEANLLGQGGFGYVHKG---VLTNGKV---VAIKQLKAGSGQGER 243
S + +E +++ + + LGQG FG V++G + G+ VA+K + + ER
Sbjct: 5 SVYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRER 64
Query: 244 -EFQAEIEIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTR 302
EF E ++ H+V L+G + G L+V E + + L+ +L N P R
Sbjct: 65 IEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR 124
Query: 303 --------MKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSL 354
+++A A G+AYL+ K +HRD+ + N ++ F K+ DFG+ +
Sbjct: 125 PPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIX 181
Query: 355 DTD 357
+TD
Sbjct: 182 ETD 184
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 92/181 (50%), Gaps = 14/181 (7%)
Query: 195 EELKIATDNFSEANL-LGQGGFGYVHKGVLTNGKV---VAIKQLKAGSGQGE-REFQAEI 249
++L + DN A++ LG G FG V +GV K VAIK LK G+ + + E E
Sbjct: 2 KKLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREA 61
Query: 250 EIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGK--DRPVMNWPTRMKIAL 307
+I+ Q+ + ++V L+G C +LV E L L GK + PV N ++
Sbjct: 62 QIMHQLDNPYIVRLIGVCQ-AEALMLVMEMAGGGPLHKFLVGKREEIPVSN---VAELLH 117
Query: 308 GSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTHVSTRVMGT 367
+ G+ YL E +HRD+ + N+LL + AK++DFGL+K D++ + R G
Sbjct: 118 QVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGK 174
Query: 368 F 368
+
Sbjct: 175 W 175
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 84/159 (52%), Gaps = 5/159 (3%)
Query: 194 YEELKIATDNFSEANLLGQGGFGYVHKGVLTNGKV-VAIKQLKAGSGQGEREFQAEIEII 252
Y++ ++ + + + LG G +G V++GV + VA+K LK + + E EF E ++
Sbjct: 7 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 65
Query: 253 SQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARG 312
++ H +LV L+G CT ++ EF+ L +L +R +N + +A +
Sbjct: 66 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 125
Query: 313 LAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ YL + IHRD+ + N L+ ++ KVADFGL++
Sbjct: 126 MEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSR 161
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 84/159 (52%), Gaps = 5/159 (3%)
Query: 194 YEELKIATDNFSEANLLGQGGFGYVHKGVLTNGKV-VAIKQLKAGSGQGEREFQAEIEII 252
Y++ ++ + + + LG G +G V++GV + VA+K LK + + E EF E ++
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 68
Query: 253 SQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARG 312
++ H +LV L+G CT ++ EF+ L +L +R +N + +A +
Sbjct: 69 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 128
Query: 313 LAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ YL + IHRD+ + N L+ ++ KVADFGL++
Sbjct: 129 MEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSR 164
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 75/153 (49%), Gaps = 6/153 (3%)
Query: 210 LGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLVGYCTF 269
LG G FG V G VAIK +K GS E EF E +++ + H LV L G CT
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 70
Query: 270 GSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRDI 329
++ E++ N L +L + R +++ + YL + +HRD+
Sbjct: 71 QRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDL 126
Query: 330 KSANILLDDSFEAKVADFGLAKHSLDTDTHVST 362
+ N L++D KV+DFGL+++ LD D + S+
Sbjct: 127 AARNCLVNDQGVVKVSDFGLSRYVLD-DEYTSS 158
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 75/153 (49%), Gaps = 6/153 (3%)
Query: 210 LGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLVGYCTF 269
LG G FG V G VAIK +K GS E EF E +++ + H LV L G CT
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 270 GSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRDI 329
++ E++ N L +L + R +++ + YL + +HRD+
Sbjct: 76 QRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDL 131
Query: 330 KSANILLDDSFEAKVADFGLAKHSLDTDTHVST 362
+ N L++D KV+DFGL+++ LD D + S+
Sbjct: 132 AARNCLVNDQGVVKVSDFGLSRYVLD-DEYTSS 163
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 76/149 (51%), Gaps = 11/149 (7%)
Query: 210 LGQGGFGYVHKGVL-----TNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLV 264
LG+G FG V G+VVA+K+L+ + + R+F+ EIEI+ + H ++V
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 265 GYCTFGSQR--LLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQP 322
G C +R L+ E++P +L +L + + ++ +G+ YL
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERI-DHIKLLQYTSQICKGMEYLG---TK 136
Query: 323 KIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ IHRD+ + NIL+++ K+ DFGL K
Sbjct: 137 RYIHRDLATRNILVENENRVKIGDFGLTK 165
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 84/159 (52%), Gaps = 5/159 (3%)
Query: 194 YEELKIATDNFSEANLLGQGGFGYVHKGVLTNGKV-VAIKQLKAGSGQGEREFQAEIEII 252
Y++ ++ + + + LG G +G V++GV + VA+K LK + + E EF E ++
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 63
Query: 253 SQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARG 312
++ H +LV L+G CT ++ EF+ L +L +R +N + +A +
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 123
Query: 313 LAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ YL + IHRD+ + N L+ ++ KVADFGL++
Sbjct: 124 MEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSR 159
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 75/153 (49%), Gaps = 6/153 (3%)
Query: 210 LGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLVGYCTF 269
LG G FG V G VAIK +K GS E EF E +++ + H LV L G CT
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 74
Query: 270 GSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRDI 329
++ E++ N L +L + R +++ + YL + +HRD+
Sbjct: 75 QRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDL 130
Query: 330 KSANILLDDSFEAKVADFGLAKHSLDTDTHVST 362
+ N L++D KV+DFGL+++ LD D + S+
Sbjct: 131 AARNCLVNDQGVVKVSDFGLSRYVLD-DEYTSS 162
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 75/153 (49%), Gaps = 6/153 (3%)
Query: 210 LGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLVGYCTF 269
LG G FG V G VAIK +K GS E EF E +++ + H LV L G CT
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 81
Query: 270 GSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRDI 329
++ E++ N L +L + R +++ + YL + +HRD+
Sbjct: 82 QRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDL 137
Query: 330 KSANILLDDSFEAKVADFGLAKHSLDTDTHVST 362
+ N L++D KV+DFGL+++ LD D + S+
Sbjct: 138 AARNCLVNDQGVVKVSDFGLSRYVLD-DEYTSS 169
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 79/159 (49%), Gaps = 7/159 (4%)
Query: 203 NFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLV 261
+ +LG+G FG K G+V+ +K+L + +R F E++++ + H +++
Sbjct: 11 DLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVL 70
Query: 262 SLVGYCTFGSQRL-LVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDC 320
+G + +RL + E++ TL + D W R+ A A G+AYLH
Sbjct: 71 KFIGV-LYKDKRLNFITEYIKGGTLRGIIKSMDSQY-PWSQRVSFAKDIASGMAYLH--- 125
Query: 321 QPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTH 359
IIHRD+ S N L+ ++ VADFGLA+ +D T
Sbjct: 126 SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQ 164
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 78/149 (52%), Gaps = 11/149 (7%)
Query: 210 LGQGGFGYVHKGVL-----TNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLV 264
LG+G FG V G+VVA+K+L+ + + R+F+ EIEI+ + H ++V
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 265 GYCTFGSQR--LLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQP 322
G C +R L+ E++P +L +L K + ++ ++ +G+ YL
Sbjct: 79 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLG---TK 134
Query: 323 KIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ IHR++ + NIL+++ K+ DFGL K
Sbjct: 135 RYIHRNLATRNILVENENRVKIGDFGLTK 163
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 84/159 (52%), Gaps = 5/159 (3%)
Query: 194 YEELKIATDNFSEANLLGQGGFGYVHKGVLTNGKV-VAIKQLKAGSGQGEREFQAEIEII 252
Y++ ++ + + + LG G +G V++GV + VA+K LK + + E EF E ++
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 63
Query: 253 SQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARG 312
++ H +LV L+G CT ++ EF+ L +L +R +N + +A +
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 123
Query: 313 LAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ YL + IHRD+ + N L+ ++ KVADFGL++
Sbjct: 124 MEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSR 159
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 81/160 (50%), Gaps = 14/160 (8%)
Query: 210 LGQGGFGYVHKGVL-----TNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLV 264
LG+G FG V G +VA+KQL+ +R+FQ EI+I+ +H +V
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 265 GYCTFGSQR---LLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQ 321
G ++G R LV E++P+ L L + R ++ + + +G+ YL
Sbjct: 79 GV-SYGPGRQSLRLVMEYLPSGCLRDFLQ-RHRARLDASRLLLYSSQICKGMEYLGSR-- 134
Query: 322 PKIIHRDIKSANILLDDSFEAKVADFGLAK-HSLDTDTHV 360
+ +HRD+ + NIL++ K+ADFGLAK LD D +V
Sbjct: 135 -RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYV 173
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 83/157 (52%), Gaps = 12/157 (7%)
Query: 208 NLLGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLVGYC 267
++G+G FG V K K VAIKQ+++ S + + F E+ +S+V+H ++V L G C
Sbjct: 15 EVVGRGAFGVVCKAKW-RAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGAC 71
Query: 268 TFGSQRLLVYEFVPNKTLEFHLHGKD-RPVMNWPTRMKIALGSARGLAYLHEDCQPK-II 325
+ LV E+ +L LHG + P M L ++G+AYLH QPK +I
Sbjct: 72 L--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLH-SMQPKALI 128
Query: 326 HRDIKSANILLDDSFEA-KVADFGLAKHSLDTDTHVS 361
HRD+K N+LL K+ DFG A D TH++
Sbjct: 129 HRDLKPPNLLLVAGGTVLKICDFGTA---CDIQTHMT 162
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 81/160 (50%), Gaps = 14/160 (8%)
Query: 210 LGQGGFGYVHKGVL-----TNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLV 264
LG+G FG V G +VA+KQL+ +R+FQ EI+I+ +H +V
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 265 GYCTFGSQR---LLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQ 321
G ++G R LV E++P+ L L + R ++ + + +G+ YL
Sbjct: 91 GV-SYGPGRQSLRLVMEYLPSGCLRDFLQ-RHRARLDASRLLLYSSQICKGMEYLGSR-- 146
Query: 322 PKIIHRDIKSANILLDDSFEAKVADFGLAKHS-LDTDTHV 360
+ +HRD+ + NIL++ K+ADFGLAK LD D +V
Sbjct: 147 -RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYV 185
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 84/159 (52%), Gaps = 5/159 (3%)
Query: 194 YEELKIATDNFSEANLLGQGGFGYVHKGVLTNGKV-VAIKQLKAGSGQGEREFQAEIEII 252
Y++ ++ + + + LG G +G V++GV + VA+K LK + + E EF E ++
Sbjct: 7 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 65
Query: 253 SQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARG 312
++ H +LV L+G CT ++ EF+ L +L +R +N + +A +
Sbjct: 66 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 125
Query: 313 LAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ YL + IHRD+ + N L+ ++ KVADFGL++
Sbjct: 126 MEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSR 161
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 73/148 (49%), Gaps = 5/148 (3%)
Query: 210 LGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLVGYCTF 269
LG G G V G VA+K LK GS + F AE ++ Q+ H+ LV L T
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAVVT- 78
Query: 270 GSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRDI 329
++ E++ N +L L + + +A A G+A++ E IHRD+
Sbjct: 79 QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDL 135
Query: 330 KSANILLDDSFEAKVADFGLAKHSLDTD 357
++ANIL+ D+ K+ADFGLA+ D +
Sbjct: 136 RAANILVSDTLSCKIADFGLARLIEDAE 163
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 83/157 (52%), Gaps = 12/157 (7%)
Query: 208 NLLGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLVGYC 267
++G+G FG V K K VAIKQ+++ S + + F E+ +S+V+H ++V L G C
Sbjct: 14 EVVGRGAFGVVCKAKW-RAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGAC 70
Query: 268 TFGSQRLLVYEFVPNKTLEFHLHGKD-RPVMNWPTRMKIALGSARGLAYLHEDCQPK-II 325
+ LV E+ +L LHG + P M L ++G+AYLH QPK +I
Sbjct: 71 L--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLH-SMQPKALI 127
Query: 326 HRDIKSANILLDDSFEA-KVADFGLAKHSLDTDTHVS 361
HRD+K N+LL K+ DFG A D TH++
Sbjct: 128 HRDLKPPNLLLVAGGTVLKICDFGTA---CDIQTHMT 161
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 81/160 (50%), Gaps = 14/160 (8%)
Query: 210 LGQGGFGYVHKGVL-----TNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLV 264
LG+G FG V G +VA+KQL+ +R+FQ EI+I+ +H +V
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 77
Query: 265 GYCTFGSQR---LLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQ 321
G ++G R LV E++P+ L L + R ++ + + +G+ YL
Sbjct: 78 GV-SYGPGRQSLRLVMEYLPSGCLRDFLQ-RHRARLDASRLLLYSSQICKGMEYLGSR-- 133
Query: 322 PKIIHRDIKSANILLDDSFEAKVADFGLAKHS-LDTDTHV 360
+ +HRD+ + NIL++ K+ADFGLAK LD D +V
Sbjct: 134 -RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYV 172
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 84/159 (52%), Gaps = 5/159 (3%)
Query: 194 YEELKIATDNFSEANLLGQGGFGYVHKGVLTNGKV-VAIKQLKAGSGQGEREFQAEIEII 252
Y++ ++ + + + LG G +G V++GV + VA+K LK + + E EF E ++
Sbjct: 7 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 65
Query: 253 SQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARG 312
++ H +LV L+G CT ++ EF+ L +L +R +N + +A +
Sbjct: 66 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 125
Query: 313 LAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ YL + IHRD+ + N L+ ++ KVADFGL++
Sbjct: 126 MEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSR 161
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 89/183 (48%), Gaps = 18/183 (9%)
Query: 175 PFPRQSPGMPVGNFKSTFTYEELKIATDNFSEANLLGQGGFGYVHKGVLTN-GK---VVA 230
PF + P V F +KI ++G G FG V G L GK VA
Sbjct: 9 PFTFEDPNQAVREFAKEIDASCIKIE-------KVIGVGEFGEVCSGRLKVPGKREICVA 61
Query: 231 IKQLKAG-SGQGEREFQAEIEIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHL 289
IK LKAG + + R+F +E I+ Q H +++ L G T +++ E++ N +L+ L
Sbjct: 62 IKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFL 121
Query: 290 HGKD-RPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFG 348
D R + M +GS G+ YL + +HRD+ + NIL++ + KV+DFG
Sbjct: 122 RKNDGRFTVIQLVGMLRGIGS--GMKYLSD---MSAVHRDLAARNILVNSNLVCKVSDFG 176
Query: 349 LAK 351
+++
Sbjct: 177 MSR 179
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 80/160 (50%), Gaps = 14/160 (8%)
Query: 210 LGQGGFGYVHKGVL-----TNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLV 264
LG+G FG V G +VA+KQL+ +R+FQ EI+I+ +H +V
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 265 GYCTFGSQR---LLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQ 321
G ++G R LV E++P+ L L + R ++ + + +G+ YL
Sbjct: 75 GV-SYGPGRPELRLVMEYLPSGCLRDFLQ-RHRARLDASRLLLYSSQICKGMEYLGSR-- 130
Query: 322 PKIIHRDIKSANILLDDSFEAKVADFGLAK-HSLDTDTHV 360
+ +HRD+ + NIL++ K+ADFGLAK LD D V
Sbjct: 131 -RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXV 169
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 83/172 (48%), Gaps = 26/172 (15%)
Query: 211 GQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQ--VHHRHLVSLVGYCT 268
+G FG V K L N + VA+K Q ++ +Q E E+ S + H +++ +G
Sbjct: 33 ARGRFGCVWKAQLLN-EYVAVKIFPI---QDKQSWQNEYEVYSLPGMKHENILQFIGAEK 88
Query: 269 FGS----QRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDC---- 320
G+ L+ F +L L V++W IA ARGLAYLHED
Sbjct: 89 RGTSVDVDLWLITAFHEKGSLSDFLKAN---VVSWNELCHIAETMARGLAYLHEDIPGLK 145
Query: 321 ---QPKIIHRDIKSANILLDDSFEAKVADFGLA------KHSLDTDTHVSTR 363
+P I HRDIKS N+LL ++ A +ADFGLA K + DT V TR
Sbjct: 146 DGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTR 197
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 79/150 (52%), Gaps = 13/150 (8%)
Query: 209 LLGQGGFGYVHKGVLTN-GK---VVAIKQLKAG-SGQGEREFQAEIEIISQVHHRHLVSL 263
++G G FG V +G L GK VAIK LK G + + REF +E I+ Q H +++ L
Sbjct: 23 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 82
Query: 264 VGYCTFGSQRLLVYEFVPNKTLEFHLHGKDR--PVMNWPTRMKIALGSARGLAYLHEDCQ 321
G T +++ EF+ N L+ L D V+ ++ G A G+ YL E
Sbjct: 83 EGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLR---GIASGMRYLAE--- 136
Query: 322 PKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+HRD+ + NIL++ + KV+DFGL++
Sbjct: 137 MSYVHRDLAARNILVNSNLVCKVSDFGLSR 166
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 79/150 (52%), Gaps = 13/150 (8%)
Query: 209 LLGQGGFGYVHKGVLTN-GK---VVAIKQLKAG-SGQGEREFQAEIEIISQVHHRHLVSL 263
++G G FG V +G L GK VAIK LK G + + REF +E I+ Q H +++ L
Sbjct: 21 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 80
Query: 264 VGYCTFGSQRLLVYEFVPNKTLEFHLHGKDR--PVMNWPTRMKIALGSARGLAYLHEDCQ 321
G T +++ EF+ N L+ L D V+ ++ G A G+ YL E
Sbjct: 81 EGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLR---GIASGMRYLAE--- 134
Query: 322 PKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+HRD+ + NIL++ + KV+DFGL++
Sbjct: 135 MSYVHRDLAARNILVNSNLVCKVSDFGLSR 164
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 89/174 (51%), Gaps = 6/174 (3%)
Query: 180 SPGMPVGNFKSTF-TYEELKIATDNFSEANLLGQGGFGYVHKGVLTNGKV-VAIKQLKAG 237
S G+ +G F + ++ ++ + + + LG G +G V+ GV + VA+K LK
Sbjct: 9 SSGVDLGTENLYFQSMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKED 68
Query: 238 SGQGEREFQAEIEIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVM 297
+ + E EF E ++ ++ H +LV L+G CT +V E++P L +L +R +
Sbjct: 69 TMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEV 127
Query: 298 NWPTRMKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ +A + + YL + IHRD+ + N L+ ++ KVADFGL++
Sbjct: 128 TAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHVVKVADFGLSR 178
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 84/159 (52%), Gaps = 5/159 (3%)
Query: 194 YEELKIATDNFSEANLLGQGGFGYVHKGVLTNGKV-VAIKQLKAGSGQGEREFQAEIEII 252
Y++ ++ + + + LG G +G V++GV + VA+K LK + + E EF E ++
Sbjct: 251 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 309
Query: 253 SQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARG 312
++ H +LV L+G CT ++ EF+ L +L +R +N + +A +
Sbjct: 310 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 369
Query: 313 LAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ YL + IHR++ + N L+ ++ KVADFGL++
Sbjct: 370 MEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSR 405
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 87/182 (47%), Gaps = 18/182 (9%)
Query: 190 STFTYEELKIATDNFSEANLLGQGGFGYVHKG---VLTNGKV---VAIKQLKAGSGQGER 243
S F +E +++ + + LGQG FG V++G + G+ VA+K + + ER
Sbjct: 5 SVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRER 64
Query: 244 -EFQAEIEIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTR 302
EF E ++ H+V L+G + G L+V E + + L+ +L N P R
Sbjct: 65 IEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR 124
Query: 303 --------MKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSL 354
+++A A G+AYL+ K +HRD+ + N ++ F K+ DFG+ +
Sbjct: 125 PPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIY 181
Query: 355 DT 356
+T
Sbjct: 182 ET 183
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 76/155 (49%), Gaps = 12/155 (7%)
Query: 204 FSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQAEIEIISQV-HHRHLV 261
F L+G G +G V+KG + G++ AIK + +G E E + EI ++ + HHR++
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDV-TGDEEEEIKQEINMLKKYSHHRNIA 84
Query: 262 SLVGYCT------FGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAY 315
+ G Q LV EF ++ + + I RGL++
Sbjct: 85 TYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSH 144
Query: 316 LHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
LH Q K+IHRDIK N+LL ++ E K+ DFG++
Sbjct: 145 LH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVS 176
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 84/159 (52%), Gaps = 5/159 (3%)
Query: 194 YEELKIATDNFSEANLLGQGGFGYVHKGVLTNGKV-VAIKQLKAGSGQGEREFQAEIEII 252
Y++ ++ + + + LG G +G V++GV + VA+K LK + + E EF E ++
Sbjct: 209 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 267
Query: 253 SQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARG 312
++ H +LV L+G CT ++ EF+ L +L +R +N + +A +
Sbjct: 268 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 327
Query: 313 LAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ YL + IHR++ + N L+ ++ KVADFGL++
Sbjct: 328 MEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSR 363
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 89/185 (48%), Gaps = 18/185 (9%)
Query: 190 STFTYEELKIATDNFSEANLLGQGGFGYVHKG---VLTNGKV---VAIKQLKAGSGQGER 243
S + +E +++ + + LGQG FG V++G + G+ VA+K + + ER
Sbjct: 5 SVYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRER 64
Query: 244 -EFQAEIEIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTR 302
EF E ++ H+V L+G + G L+V E + + L+ +L N P R
Sbjct: 65 IEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR 124
Query: 303 --------MKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSL 354
+++A A G+AYL+ K +HR++ + N ++ F K+ DFG+ +
Sbjct: 125 PPPTLQEMIQMAAEIADGMAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIY 181
Query: 355 DTDTH 359
+TD +
Sbjct: 182 ETDYY 186
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 89/185 (48%), Gaps = 18/185 (9%)
Query: 190 STFTYEELKIATDNFSEANLLGQGGFGYVHKG---VLTNGKV---VAIKQLKAGSGQGER 243
S + +E +++ + + LGQG FG V++G + G+ VA+K + + ER
Sbjct: 6 SVYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRER 65
Query: 244 -EFQAEIEIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTR 302
EF E ++ H+V L+G + G L+V E + + L+ +L N P R
Sbjct: 66 IEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR 125
Query: 303 --------MKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSL 354
+++A A G+AYL+ K +HR++ + N ++ F K+ DFG+ +
Sbjct: 126 PPPTLQEMIQMAAEIADGMAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIY 182
Query: 355 DTDTH 359
+TD +
Sbjct: 183 ETDYY 187
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 84/163 (51%), Gaps = 22/163 (13%)
Query: 208 NLLGQGGFGYVHKGVLTNGKV---VAIKQLKA-GSGQGEREFQAEIEIISQV-HHRHLVS 262
+++G+G FG V K + + AIK++K S R+F E+E++ ++ HH ++++
Sbjct: 28 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 87
Query: 263 LVGYCTFGSQRLLVYEFVP----------NKTLE----FHLHGKDRPVMNWPTRMKIALG 308
L+G C L E+ P ++ LE F + ++ + A
Sbjct: 88 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 147
Query: 309 SARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
ARG+ YL Q + IHR++ + NIL+ +++ AK+ADFGL++
Sbjct: 148 VARGMDYLS---QKQFIHRNLAARNILVGENYVAKIADFGLSR 187
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 84/159 (52%), Gaps = 5/159 (3%)
Query: 194 YEELKIATDNFSEANLLGQGGFGYVHKGVLTNGKV-VAIKQLKAGSGQGEREFQAEIEII 252
Y++ ++ + + + LG G +G V++GV + VA+K LK + + E EF E ++
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 68
Query: 253 SQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARG 312
++ H +LV L+G CT ++ EF+ L +L +R ++ + +A +
Sbjct: 69 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 128
Query: 313 LAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ YL + IHRD+ + N L+ ++ KVADFGL++
Sbjct: 129 MEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSR 164
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 84/159 (52%), Gaps = 5/159 (3%)
Query: 194 YEELKIATDNFSEANLLGQGGFGYVHKGVLTNGKV-VAIKQLKAGSGQGEREFQAEIEII 252
Y++ ++ + + + LG G +G V++GV + VA+K LK + + E EF E ++
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 63
Query: 253 SQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARG 312
++ H +LV L+G CT ++ EF+ L +L +R ++ + +A +
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 123
Query: 313 LAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ YL + IHRD+ + N L+ ++ KVADFGL++
Sbjct: 124 MEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSR 159
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 84/159 (52%), Gaps = 5/159 (3%)
Query: 194 YEELKIATDNFSEANLLGQGGFGYVHKGVLTNGKV-VAIKQLKAGSGQGEREFQAEIEII 252
Y++ ++ + + + LG G +G V++GV + VA+K LK + + E EF E ++
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 63
Query: 253 SQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARG 312
++ H +LV L+G CT ++ EF+ L +L +R ++ + +A +
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 123
Query: 313 LAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ YL + IHRD+ + N L+ ++ KVADFGL++
Sbjct: 124 MEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSR 159
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 84/159 (52%), Gaps = 5/159 (3%)
Query: 194 YEELKIATDNFSEANLLGQGGFGYVHKGVLTNGKV-VAIKQLKAGSGQGEREFQAEIEII 252
Y++ ++ + + + LG G +G V++GV + VA+K LK + + E EF E ++
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 63
Query: 253 SQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARG 312
++ H +LV L+G CT ++ EF+ L +L +R ++ + +A +
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 123
Query: 313 LAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ YL + IHRD+ + N L+ ++ KVADFGL++
Sbjct: 124 MEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSR 159
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 84/159 (52%), Gaps = 5/159 (3%)
Query: 194 YEELKIATDNFSEANLLGQGGFGYVHKGVLTNGKV-VAIKQLKAGSGQGEREFQAEIEII 252
Y++ ++ + + + LG G +G V++GV + VA+K LK + + E EF E ++
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 63
Query: 253 SQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARG 312
++ H +LV L+G CT ++ EF+ L +L +R ++ + +A +
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 123
Query: 313 LAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ YL + IHRD+ + N L+ ++ KVADFGL++
Sbjct: 124 MEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSR 159
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 81/163 (49%), Gaps = 8/163 (4%)
Query: 204 FSEANLLGQGGFGYVHKGVLT-NGKVVAIKQLK-AGSGQGEREFQAEIEIISQVHHRHLV 261
F++ +G+G FG V KG+ +VVAIK + + + Q EI ++SQ ++
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 262 SLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQ 321
G GS+ ++ E++ + L T +K L +GL YLH +
Sbjct: 85 KYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEIL---KGLDYLHSE-- 139
Query: 322 PKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTHVSTRV 364
K IHRDIK+AN+LL + + K+ADFG+A DT +T V
Sbjct: 140 -KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV 181
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 83/159 (52%), Gaps = 19/159 (11%)
Query: 203 NFSEANLLGQGGFGYVHKGVLT--NGKV---VAIKQLK-AGSGQGEREFQAEIEIISQVH 256
F + +LG G FG V+KG+ KV VAIK+L+ A S + +E E +++ V
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 257 HRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKD----RPVMNWPTRMKIALGSARG 312
+ H+ L+G C + +L++ L++ KD + ++NW ++ A+G
Sbjct: 80 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 133
Query: 313 LAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ YL + +++HRD+ + N+L+ K+ DFGLAK
Sbjct: 134 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 169
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 81/156 (51%), Gaps = 13/156 (8%)
Query: 203 NFSEANLLGQGGFGYVHKGVL---TNGKV-VAIKQLKAGSGQGER-EFQAEIEIISQVHH 257
N S ++G G FG V G L + ++ VAIK LK G + +R +F E I+ Q H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 258 RHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHL--HGKDRPVMNWPTRMKIALGSARGLAY 315
+++ L G T ++V E++ N +L+ L H V+ ++ G A G+ Y
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMKY 162
Query: 316 LHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
L + +HRD+ + NIL++ + KV+DFGLA+
Sbjct: 163 LSD---MGYVHRDLAARNILINSNLVCKVSDFGLAR 195
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 83/159 (52%), Gaps = 19/159 (11%)
Query: 203 NFSEANLLGQGGFGYVHKGVLT--NGKV---VAIKQLK-AGSGQGEREFQAEIEIISQVH 256
F + +LG G FG V+KG+ KV VAIK+L+ A S + +E E +++ V
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 257 HRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKD----RPVMNWPTRMKIALGSARG 312
+ H+ L+G C + +L++ L++ KD + ++NW ++ A+G
Sbjct: 77 NPHVCRLLGICLTSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQI------AKG 130
Query: 313 LAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ YL + +++HRD+ + N+L+ K+ DFGLAK
Sbjct: 131 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 166
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 79/170 (46%), Gaps = 23/170 (13%)
Query: 210 LGQGGFGYVHKGVLTN------GKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSL 263
LG+G FG V N +VA+K LK + ++FQ E E+++ + H H+V
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 264 VGYCTFGSQRLLVYEFVPNKTLEFHL--HGKDRPVM--NWPTRMKIALG----------S 309
G C G ++V+E++ + L L HG D ++ P + K LG
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 310 ARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTH 359
A G+ YL +HRD+ + N L+ + K+ DFG+++ TD +
Sbjct: 143 ASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYY 189
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 76/143 (53%), Gaps = 5/143 (3%)
Query: 210 LGQGGFGYVHKGVLTNGKV-VAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLVGYCT 268
LG G FG V++GV + VA+K LK + + E EF E ++ ++ H +LV L+G CT
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 269 FGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRD 328
++ EF+ L +L +R ++ + +A + + YL + IHRD
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRD 134
Query: 329 IKSANILLDDSFEAKVADFGLAK 351
+ + N L+ ++ KVADFGL++
Sbjct: 135 LAARNCLVGENHLVKVADFGLSR 157
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 94/187 (50%), Gaps = 25/187 (13%)
Query: 195 EELKIATDNFSEANLLGQGGFGYVHK----GVLTNGKV--VAIKQLKAGSGQGERE-FQA 247
E+ + +N LG G FG V + G+ V VA+K LK+ + E+E +
Sbjct: 39 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 98
Query: 248 EIEIISQV-HHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWP------ 300
E++I+S + H ++V+L+G CT G L++ E+ L L K R + P
Sbjct: 99 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIAN 158
Query: 301 ----TRMKIALGS--ARGLAYL-HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHS 353
TR + S A+G+A+L ++C IHRD+ + N+LL + AK+ DFGLA+
Sbjct: 159 STLSTRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDI 214
Query: 354 LDTDTHV 360
++ ++
Sbjct: 215 MNDSNYI 221
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 94/187 (50%), Gaps = 25/187 (13%)
Query: 195 EELKIATDNFSEANLLGQGGFGYVHK----GVLTNGKV--VAIKQLKAGSGQGERE-FQA 247
E+ + +N LG G FG V + G+ V VA+K LK+ + E+E +
Sbjct: 39 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 98
Query: 248 EIEIISQV-HHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWP------ 300
E++I+S + H ++V+L+G CT G L++ E+ L L K R + P
Sbjct: 99 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIAN 158
Query: 301 ----TRMKIALGS--ARGLAYL-HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHS 353
TR + S A+G+A+L ++C IHRD+ + N+LL + AK+ DFGLA+
Sbjct: 159 STASTRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDI 214
Query: 354 LDTDTHV 360
++ ++
Sbjct: 215 MNDSNYI 221
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 88/190 (46%), Gaps = 22/190 (11%)
Query: 193 TYEELKIATDNFSEA---------NLLGQGGFGYVHKGVLT----NGKVVAIKQLKAGSG 239
TYE+ A F++ ++G G FG V G L VAIK LK G
Sbjct: 25 TYEDPNRAVHQFAKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYT 84
Query: 240 QGER-EFQAEIEIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHL--HGKDRPV 296
+ +R +F E I+ Q H ++V L G T G ++V EF+ N L+ L H V
Sbjct: 85 EKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTV 144
Query: 297 MNWPTRMKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDT 356
+ ++ G A G+ YL + +HRD+ + NIL++ + KV+DFGL++ D
Sbjct: 145 IQLVGMLR---GIAAGMRYLAD---MGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDD 198
Query: 357 DTHVSTRVMG 366
V T G
Sbjct: 199 PEAVYTTTGG 208
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 83/159 (52%), Gaps = 19/159 (11%)
Query: 203 NFSEANLLGQGGFGYVHKGVLT--NGKV---VAIKQLK-AGSGQGEREFQAEIEIISQVH 256
F + +LG G FG V+KG+ KV VAIK+L+ A S + +E E +++ V
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 257 HRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKD----RPVMNWPTRMKIALGSARG 312
+ H+ L+G C + +L++ L++ KD + ++NW ++ A+G
Sbjct: 77 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 130
Query: 313 LAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ YL + +++HRD+ + N+L+ K+ DFGLAK
Sbjct: 131 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 166
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 83/159 (52%), Gaps = 19/159 (11%)
Query: 203 NFSEANLLGQGGFGYVHKGVLT--NGKV---VAIKQLK-AGSGQGEREFQAEIEIISQVH 256
F + +LG G FG V+KG+ KV VAIK+L+ A S + +E E +++ V
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 257 HRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKD----RPVMNWPTRMKIALGSARG 312
+ H+ L+G C + +L++ L++ KD + ++NW ++ A+G
Sbjct: 79 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 132
Query: 313 LAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ YL + +++HRD+ + N+L+ K+ DFGLAK
Sbjct: 133 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 168
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 83/159 (52%), Gaps = 19/159 (11%)
Query: 203 NFSEANLLGQGGFGYVHKGVLT--NGKV---VAIKQLK-AGSGQGEREFQAEIEIISQVH 256
F + +LG G FG V+KG+ KV VAIK+L+ A S + +E E +++ V
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 257 HRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKD----RPVMNWPTRMKIALGSARG 312
+ H+ L+G C + +L++ L++ KD + ++NW ++ A+G
Sbjct: 76 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 129
Query: 313 LAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ YL + +++HRD+ + N+L+ K+ DFGLAK
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 165
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 83/159 (52%), Gaps = 19/159 (11%)
Query: 203 NFSEANLLGQGGFGYVHKGVLT--NGKV---VAIKQLK-AGSGQGEREFQAEIEIISQVH 256
F + +LG G FG V+KG+ KV VAIK+L+ A S + +E E +++ V
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 257 HRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKD----RPVMNWPTRMKIALGSARG 312
+ H+ L+G C + +L++ L++ KD + ++NW ++ A+G
Sbjct: 78 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 131
Query: 313 LAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ YL + +++HRD+ + N+L+ K+ DFGLAK
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 167
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 82/159 (51%), Gaps = 19/159 (11%)
Query: 203 NFSEANLLGQGGFGYVHKGVLT--NGKV---VAIKQLK-AGSGQGEREFQAEIEIISQVH 256
F + +LG G FG V+KG+ KV VAIK+L+ A S + +E E +++ V
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 257 HRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKD----RPVMNWPTRMKIALGSARG 312
+ H+ L+G C + +L+ L++ KD + ++NW ++ A+G
Sbjct: 76 NPHVCRLLGICLTSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQI------AKG 129
Query: 313 LAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ YL + +++HRD+ + N+L+ K+ DFGLAK
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 165
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 82/159 (51%), Gaps = 19/159 (11%)
Query: 203 NFSEANLLGQGGFGYVHKGVLT--NGKV---VAIKQLK-AGSGQGEREFQAEIEIISQVH 256
F + +LG G FG V+KG+ KV VAIK+L+ A S + +E E +++ V
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 85
Query: 257 HRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKD----RPVMNWPTRMKIALGSARG 312
+ H+ L+G C + +L+ L++ KD + ++NW ++ A+G
Sbjct: 86 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 139
Query: 313 LAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ YL + +++HRD+ + N+L+ K+ DFGLAK
Sbjct: 140 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 175
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 84/159 (52%), Gaps = 5/159 (3%)
Query: 194 YEELKIATDNFSEANLLGQGGFGYVHKGVLTNGKV-VAIKQLKAGSGQGEREFQAEIEII 252
Y++ ++ + + + LG G +G V++GV + VA+K LK + + E EF E ++
Sbjct: 212 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 270
Query: 253 SQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARG 312
++ H +LV L+G CT ++ EF+ L +L +R ++ + +A +
Sbjct: 271 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 330
Query: 313 LAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ YL + IHR++ + N L+ ++ KVADFGL++
Sbjct: 331 MEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSR 366
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 18/165 (10%)
Query: 210 LGQGGFGYVHKG---VLTNGKV---VAIKQLKAGSGQGER-EFQAEIEIISQVHHRHLVS 262
LGQG FG V++G + G+ VA+K + + ER EF E ++ H+V
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 263 LVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTR--------MKIALGSARGLA 314
L+G + G L+V E + + L+ +L N P R +++A A G+A
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 315 YLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTH 359
YL+ K +HRD+ + N ++ F K+ DFG+ + +TD +
Sbjct: 144 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYY 185
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 94/206 (45%), Gaps = 32/206 (15%)
Query: 168 GSLDSDK-PFPRQSPGMPVGNFKSTFTYEELKIATDNFSEANLLGQGGFGYVHK----GV 222
GS+D D+ P +P K F + LK+ LG+G FG V + G+
Sbjct: 1 GSMDPDELPLDEHCERLPYDASKWEFPRDRLKLGKP-------LGRGAFGQVIEADAFGI 53
Query: 223 --LTNGKVVAIKQLKAGSGQGE-REFQAEIEIISQV-HHRHLVSLVGYCTF-GSQRLLVY 277
+ VA+K LK G+ E R +E++I+ + HH ++V+L+G CT G +++
Sbjct: 54 DKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 113
Query: 278 EFVPNKTLEFHLHGKD------------RPVMNWPTRMKIALGSARGLAYLHEDCQPKII 325
EF L +L K + + + + A+G+ +L K I
Sbjct: 114 EFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXI 170
Query: 326 HRDIKSANILLDDSFEAKVADFGLAK 351
HRD+ + NILL + K+ DFGLA+
Sbjct: 171 HRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 82/159 (51%), Gaps = 19/159 (11%)
Query: 203 NFSEANLLGQGGFGYVHKGVLT--NGKV---VAIKQLK-AGSGQGEREFQAEIEIISQVH 256
F + +LG G FG V+KG+ KV VAIK+L+ A S + +E E +++ V
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 257 HRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKD----RPVMNWPTRMKIALGSARG 312
+ H+ L+G C + +L+ L++ KD + ++NW ++ A+G
Sbjct: 79 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 132
Query: 313 LAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ YL + +++HRD+ + N+L+ K+ DFGLAK
Sbjct: 133 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 168
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 82/159 (51%), Gaps = 19/159 (11%)
Query: 203 NFSEANLLGQGGFGYVHKGVLT--NGKV---VAIKQLK-AGSGQGEREFQAEIEIISQVH 256
F + +LG G FG V+KG+ KV VAIK+L+ A S + +E E +++ V
Sbjct: 41 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 100
Query: 257 HRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKD----RPVMNWPTRMKIALGSARG 312
+ H+ L+G C + +L+ L++ KD + ++NW ++ A+G
Sbjct: 101 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 154
Query: 313 LAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ YL + +++HRD+ + N+L+ K+ DFGLAK
Sbjct: 155 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 190
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 81/156 (51%), Gaps = 13/156 (8%)
Query: 203 NFSEANLLGQGGFGYVHKGVL---TNGKV-VAIKQLKAGSGQGER-EFQAEIEIISQVHH 257
N S ++G G FG V G L + ++ VAIK LK G + +R +F E I+ Q H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 258 RHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHL--HGKDRPVMNWPTRMKIALGSARGLAY 315
+++ L G T ++V E++ N +L+ L H V+ ++ G A G+ Y
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMKY 162
Query: 316 LHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
L + +HRD+ + NIL++ + KV+DFGL++
Sbjct: 163 LSD---MGFVHRDLAARNILINSNLVCKVSDFGLSR 195
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 88/188 (46%), Gaps = 34/188 (18%)
Query: 203 NFSEANLLGQGGFGYVHKGVLTNGK------VVAIKQLKAGSGQGE-REFQAEIEIISQV 255
N LG+G FG V K + K VA+K LK + E R+ +E ++ QV
Sbjct: 24 NLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQV 83
Query: 256 HHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPV---------------MNWP 300
+H H++ L G C+ LL+ E+ +L L + R V ++ P
Sbjct: 84 NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLR-ESRKVGPGYLGSGGSRNSSSLDHP 142
Query: 301 TRMKIALGS--------ARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKH 352
+ +G ++G+ YL E K++HRD+ + NIL+ + + K++DFGL++
Sbjct: 143 DERALTMGDLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFGLSRD 199
Query: 353 SLDTDTHV 360
+ D++V
Sbjct: 200 VYEEDSYV 207
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 82/159 (51%), Gaps = 19/159 (11%)
Query: 203 NFSEANLLGQGGFGYVHKGVLT--NGKV---VAIKQLK-AGSGQGEREFQAEIEIISQVH 256
F + +LG G FG V+KG+ KV VAIK+L+ A S + +E E +++ V
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 257 HRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKD----RPVMNWPTRMKIALGSARG 312
+ H+ L+G C + +L+ L++ KD + ++NW ++ A+G
Sbjct: 79 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 132
Query: 313 LAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ YL + +++HRD+ + N+L+ K+ DFGLAK
Sbjct: 133 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 168
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 82/159 (51%), Gaps = 19/159 (11%)
Query: 203 NFSEANLLGQGGFGYVHKGVLT--NGKV---VAIKQLK-AGSGQGEREFQAEIEIISQVH 256
F + +LG G FG V+KG+ KV VAIK+L+ A S + +E E +++ V
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 257 HRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKD----RPVMNWPTRMKIALGSARG 312
+ H+ L+G C + +L+ L++ KD + ++NW ++ A+G
Sbjct: 78 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 131
Query: 313 LAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ YL + +++HRD+ + N+L+ K+ DFGLAK
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 167
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 82/159 (51%), Gaps = 19/159 (11%)
Query: 203 NFSEANLLGQGGFGYVHKGVLT--NGKV---VAIKQLK-AGSGQGEREFQAEIEIISQVH 256
F + +LG G FG V+KG+ KV VAIK+L+ A S + +E E +++ V
Sbjct: 22 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 81
Query: 257 HRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKD----RPVMNWPTRMKIALGSARG 312
+ H+ L+G C + +L+ L++ KD + ++NW ++ A+G
Sbjct: 82 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 135
Query: 313 LAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ YL + +++HRD+ + N+L+ K+ DFGLAK
Sbjct: 136 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 171
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 82/159 (51%), Gaps = 19/159 (11%)
Query: 203 NFSEANLLGQGGFGYVHKGVLT--NGKV---VAIKQLK-AGSGQGEREFQAEIEIISQVH 256
F + +LG G FG V+KG+ KV VAIK+L+ A S + +E E +++ V
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 257 HRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKD----RPVMNWPTRMKIALGSARG 312
+ H+ L+G C + +L+ L++ KD + ++NW ++ A+G
Sbjct: 79 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 132
Query: 313 LAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ YL + +++HRD+ + N+L+ K+ DFGLAK
Sbjct: 133 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 168
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 74/148 (50%), Gaps = 5/148 (3%)
Query: 210 LGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLVGYCT 268
LG G FG V+K G + A K ++ S + ++ EIEI++ H ++V L+G
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 269 FGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRD 328
+ ++ EF P ++ + DR + P + L +LH +IIHRD
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELDRGLTE-PQIQVVCRQMLEALNFLH---SKRIIHRD 134
Query: 329 IKSANILLDDSFEAKVADFGLAKHSLDT 356
+K+ N+L+ + ++ADFG++ +L T
Sbjct: 135 LKAGNVLMTLEGDIRLADFGVSAKNLKT 162
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 74/148 (50%), Gaps = 5/148 (3%)
Query: 210 LGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLVGYCT 268
LG G FG V+K G + A K ++ S + ++ EIEI++ H ++V L+G
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 269 FGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRD 328
+ ++ EF P ++ + DR + P + L +LH +IIHRD
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLELDRGLTE-PQIQVVCRQMLEALNFLH---SKRIIHRD 142
Query: 329 IKSANILLDDSFEAKVADFGLAKHSLDT 356
+K+ N+L+ + ++ADFG++ +L T
Sbjct: 143 LKAGNVLMTLEGDIRLADFGVSAKNLKT 170
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 82/159 (51%), Gaps = 19/159 (11%)
Query: 203 NFSEANLLGQGGFGYVHKGVLT--NGKV---VAIKQLK-AGSGQGEREFQAEIEIISQVH 256
F + +LG G FG V+KG+ KV VAIK+L+ A S + +E E +++ V
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 257 HRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKD----RPVMNWPTRMKIALGSARG 312
+ H+ L+G C + +L+ L++ KD + ++NW ++ A+G
Sbjct: 83 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 136
Query: 313 LAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ YL + +++HRD+ + N+L+ K+ DFGLAK
Sbjct: 137 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 172
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 86/171 (50%), Gaps = 15/171 (8%)
Query: 190 STFTYEELKIATD--NFSEANLLGQGGFGYVHKGVL---TNGKV-VAIKQLKAGSGQGER 243
ST T E D N S ++G G FG V G L + ++ VAIK LK G + +R
Sbjct: 19 STQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 78
Query: 244 -EFQAEIEIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHL--HGKDRPVMNWP 300
+F E I+ Q H +++ L G T ++V E++ N +L+ L H V+
Sbjct: 79 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV 138
Query: 301 TRMKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
++ G A G+ YL + +HRD+ + NIL++ + KV+DFGL++
Sbjct: 139 GMLR---GIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSR 183
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 82/159 (51%), Gaps = 19/159 (11%)
Query: 203 NFSEANLLGQGGFGYVHKGVLT--NGKV---VAIKQLK-AGSGQGEREFQAEIEIISQVH 256
F + +LG G FG V+KG+ KV VAIK+L+ A S + +E E +++ V
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 257 HRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKD----RPVMNWPTRMKIALGSARG 312
+ H+ L+G C + +L+ L++ KD + ++NW ++ A+G
Sbjct: 76 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 129
Query: 313 LAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ YL + +++HRD+ + N+L+ K+ DFGLAK
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 165
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 79/158 (50%), Gaps = 10/158 (6%)
Query: 203 NFSEANLL---GQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRH 259
N E LL G+G FG V G G VA+K +K + + F AE +++Q+ H +
Sbjct: 191 NMKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSN 247
Query: 260 LVSLVGYCTFGSQRL-LVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHE 318
LV L+G L +V E++ +L +L + R V+ +K +L + YL
Sbjct: 248 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 307
Query: 319 DCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDT 356
+ +HRD+ + N+L+ + AKV+DFGL K + T
Sbjct: 308 N---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 342
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 76/143 (53%), Gaps = 5/143 (3%)
Query: 210 LGQGGFGYVHKGVLTNGKV-VAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLVGYCT 268
LG G +G V++GV + VA+K LK + + E EF E ++ ++ H +LV L+G CT
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 269 FGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRD 328
++ EF+ L +L +R ++ + +A + + YL + IHRD
Sbjct: 78 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRD 134
Query: 329 IKSANILLDDSFEAKVADFGLAK 351
+ + N L+ ++ KVADFGL++
Sbjct: 135 LAARNCLVGENHLVKVADFGLSR 157
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 86/171 (50%), Gaps = 15/171 (8%)
Query: 190 STFTYEELKIATD--NFSEANLLGQGGFGYVHKGVL---TNGKV-VAIKQLKAGSGQGER 243
ST T E D N S ++G G FG V G L + ++ VAIK LK G + +R
Sbjct: 2 STQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 61
Query: 244 -EFQAEIEIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHL--HGKDRPVMNWP 300
+F E I+ Q H +++ L G T ++V E++ N +L+ L H V+
Sbjct: 62 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV 121
Query: 301 TRMKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
++ G A G+ YL + +HRD+ + NIL++ + KV+DFGL++
Sbjct: 122 GMLR---GIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSR 166
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 81/156 (51%), Gaps = 13/156 (8%)
Query: 203 NFSEANLLGQGGFGYVHKGVL---TNGKV-VAIKQLKAGSGQGER-EFQAEIEIISQVHH 257
N S ++G G FG V G L + ++ VAIK LK G + +R +F E I+ Q H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 258 RHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHL--HGKDRPVMNWPTRMKIALGSARGLAY 315
+++ L G T ++V E++ N +L+ L H V+ ++ G A G+ Y
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMKY 162
Query: 316 LHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
L + +HRD+ + NIL++ + KV+DFGL++
Sbjct: 163 LSD---MGYVHRDLAARNILINSNLVCKVSDFGLSR 195
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 82/159 (51%), Gaps = 19/159 (11%)
Query: 203 NFSEANLLGQGGFGYVHKGVLT--NGKV---VAIKQLK-AGSGQGEREFQAEIEIISQVH 256
F + +LG G FG V+KG+ KV VAIK+L+ A S + +E E +++ V
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 69
Query: 257 HRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKD----RPVMNWPTRMKIALGSARG 312
+ H+ L+G C + +L+ L++ KD + ++NW ++ A+G
Sbjct: 70 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 123
Query: 313 LAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ YL + +++HRD+ + N+L+ K+ DFGLAK
Sbjct: 124 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 159
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 79/158 (50%), Gaps = 10/158 (6%)
Query: 203 NFSEANLL---GQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRH 259
N E LL G+G FG V G KV A+K +K + + F AE +++Q+ H +
Sbjct: 10 NMKELKLLQTIGKGEFGDVMLGDYRGNKV-AVKCIK--NDATAQAFLAEASVMTQLRHSN 66
Query: 260 LVSLVGYCTFGSQRL-LVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHE 318
LV L+G L +V E++ +L +L + R V+ +K +L + YL
Sbjct: 67 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 126
Query: 319 DCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDT 356
+ +HRD+ + N+L+ + AKV+DFGL K + T
Sbjct: 127 N---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 161
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 82/165 (49%), Gaps = 23/165 (13%)
Query: 200 ATDNFSEANLLGQGGFGYVHKGVLTNGK-VVAIKQL------KAGSGQGEREFQAEIEII 252
A ++F LG+G FG V+ N K ++A+K L KAG E + + E+EI
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGV---EHQLRREVEIQ 62
Query: 253 SQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHG----KDRPVMNWPTRMKIALG 308
S + H +++ L GY ++ L+ E+ P T+ L ++ + T +
Sbjct: 63 SHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL----- 117
Query: 309 SARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHS 353
A L+Y H K+IHRDIK N+LL + E K+ADFG + H+
Sbjct: 118 -ANALSYCH---SKKVIHRDIKPENLLLGSAGELKIADFGWSVHA 158
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 81/156 (51%), Gaps = 13/156 (8%)
Query: 203 NFSEANLLGQGGFGYVHKGVL---TNGKV-VAIKQLKAGSGQGER-EFQAEIEIISQVHH 257
N S ++G G FG V G L + ++ VAIK LK G + +R +F E I+ Q H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 258 RHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHL--HGKDRPVMNWPTRMKIALGSARGLAY 315
+++ L G T ++V E++ N +L+ L H V+ ++ G A G+ Y
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMKY 162
Query: 316 LHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
L + +HRD+ + NIL++ + KV+DFGL++
Sbjct: 163 LSD---MGYVHRDLAARNILINSNLVCKVSDFGLSR 195
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 81/156 (51%), Gaps = 13/156 (8%)
Query: 203 NFSEANLLGQGGFGYVHKGVL---TNGKV-VAIKQLKAGSGQGER-EFQAEIEIISQVHH 257
N S ++G G FG V G L + ++ VAIK LK G + +R +F E I+ Q H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 258 RHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHL--HGKDRPVMNWPTRMKIALGSARGLAY 315
+++ L G T ++V E++ N +L+ L H V+ ++ G A G+ Y
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMKY 162
Query: 316 LHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
L + +HRD+ + NIL++ + KV+DFGL++
Sbjct: 163 LSD---MGYVHRDLAARNILINSNLVCKVSDFGLSR 195
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 81/156 (51%), Gaps = 13/156 (8%)
Query: 203 NFSEANLLGQGGFGYVHKGVL---TNGKV-VAIKQLKAGSGQGER-EFQAEIEIISQVHH 257
N S ++G G FG V G L + ++ VAIK LK G + +R +F E I+ Q H
Sbjct: 44 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 103
Query: 258 RHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHL--HGKDRPVMNWPTRMKIALGSARGLAY 315
+++ L G T ++V E++ N +L+ L H V+ ++ G A G+ Y
Sbjct: 104 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMKY 160
Query: 316 LHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
L + +HRD+ + NIL++ + KV+DFGL++
Sbjct: 161 LSD---MGYVHRDLAARNILINSNLVCKVSDFGLSR 193
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 81/156 (51%), Gaps = 13/156 (8%)
Query: 203 NFSEANLLGQGGFGYVHKGVL---TNGKV-VAIKQLKAGSGQGER-EFQAEIEIISQVHH 257
N S ++G G FG V G L + ++ VAIK LK G + +R +F E I+ Q H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 258 RHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHL--HGKDRPVMNWPTRMKIALGSARGLAY 315
+++ L G T ++V E++ N +L+ L H V+ ++ G A G+ Y
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMKY 162
Query: 316 LHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
L + +HRD+ + NIL++ + KV+DFGL++
Sbjct: 163 LSD---MGYVHRDLAARNILINSNLVCKVSDFGLSR 195
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 82/159 (51%), Gaps = 19/159 (11%)
Query: 203 NFSEANLLGQGGFGYVHKGVLT--NGKV---VAIKQLK-AGSGQGEREFQAEIEIISQVH 256
F + +LG G FG V+KG+ KV VAIK+L+ A S + +E E +++ V
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 257 HRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKD----RPVMNWPTRMKIALGSARG 312
+ H+ L+G C + +L+ L++ KD + ++NW ++ A+G
Sbjct: 76 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 129
Query: 313 LAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ YL + +++HRD+ + N+L+ K+ DFGLAK
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 165
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 86/153 (56%), Gaps = 9/153 (5%)
Query: 202 DNFSEANLLGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQA--EIEIISQVHHRH 259
+ + + +G+G +G V+K + G++VA+K+++ + A EI ++ ++HH +
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 260 LVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSA-RGLAYLHE 318
+VSL+ LV+EF+ K L+ L + + +++KI L RG+A+ H
Sbjct: 81 IVSLIDVIHSERCLTLVFEFM-EKDLKKVLDENKTGLQD--SQIKIYLYQLLRGVAHCH- 136
Query: 319 DCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
Q +I+HRD+K N+L++ K+ADFGLA+
Sbjct: 137 --QHRILHRDLKPQNLLINSDGALKLADFGLAR 167
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 86/153 (56%), Gaps = 9/153 (5%)
Query: 202 DNFSEANLLGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQA--EIEIISQVHHRH 259
+ + + +G+G +G V+K + G++VA+K+++ + A EI ++ ++HH +
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 260 LVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSA-RGLAYLHE 318
+VSL+ LV+EF+ K L+ L + + +++KI L RG+A+ H
Sbjct: 81 IVSLIDVIHSERCLTLVFEFM-EKDLKKVLDENKTGLQD--SQIKIYLYQLLRGVAHCH- 136
Query: 319 DCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
Q +I+HRD+K N+L++ K+ADFGLA+
Sbjct: 137 --QHRILHRDLKPQNLLINSDGALKLADFGLAR 167
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 79/158 (50%), Gaps = 10/158 (6%)
Query: 203 NFSEANLL---GQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRH 259
N E LL G+G FG V G KV A+K +K + + F AE +++Q+ H +
Sbjct: 4 NMKELKLLQTIGKGEFGDVMLGDYRGNKV-AVKCIKNDATA--QAFLAEASVMTQLRHSN 60
Query: 260 LVSLVGYCTFGSQRL-LVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHE 318
LV L+G L +V E++ +L +L + R V+ +K +L + YL
Sbjct: 61 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 120
Query: 319 DCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDT 356
+ +HRD+ + N+L+ + AKV+DFGL K + T
Sbjct: 121 N---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 155
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 76/143 (53%), Gaps = 5/143 (3%)
Query: 210 LGQGGFGYVHKGVLTNGKV-VAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLVGYCT 268
LG G +G V++GV + VA+K LK + + E EF E ++ ++ H +LV L+G CT
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 269 FGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRD 328
++ EF+ L +L +R ++ + +A + + YL + IHRD
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRD 134
Query: 329 IKSANILLDDSFEAKVADFGLAK 351
+ + N L+ ++ KVADFGL++
Sbjct: 135 LAARNCLVGENHLVKVADFGLSR 157
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 83/173 (47%), Gaps = 16/173 (9%)
Query: 186 GNFKSTFTYEELKIATDNFSEANLLGQGGFGYVHKGVL----TNGKVVAIKQLKAG-SGQ 240
G +FT E I ++G G G V G L VAIK LKAG + +
Sbjct: 36 GRAGRSFTRE---IEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTER 92
Query: 241 GEREFQAEIEIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHL--HGKDRPVMN 298
R+F +E I+ Q H +++ L G T G ++V E++ N +L+ L H +M
Sbjct: 93 QRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQ 152
Query: 299 WPTRMKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
++ G G+ YL + +HRD+ + N+L+D + KV+DFGL++
Sbjct: 153 LVGMLR---GVGAGMRYLSD---LGYVHRDLAARNVLVDSNLVCKVSDFGLSR 199
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 79/158 (50%), Gaps = 10/158 (6%)
Query: 203 NFSEANLL---GQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRH 259
N E LL G+G FG V G KV A+K +K + + F AE +++Q+ H +
Sbjct: 19 NMKELKLLQTIGKGEFGDVMLGDYRGNKV-AVKCIKNDATA--QAFLAEASVMTQLRHSN 75
Query: 260 LVSLVGYCTFGSQRL-LVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHE 318
LV L+G L +V E++ +L +L + R V+ +K +L + YL
Sbjct: 76 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 135
Query: 319 DCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDT 356
+ +HRD+ + N+L+ + AKV+DFGL K + T
Sbjct: 136 N---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 170
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 89/172 (51%), Gaps = 30/172 (17%)
Query: 197 LKIATDNFSEANL-----LGQGGFGYVHKGVLT----NGKV-VAIKQLKAGSGQGEREFQ 246
+K+ F E L LG G FG VHKGV + K+ V IK ++ SG+ + FQ
Sbjct: 3 MKVLARIFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGR--QSFQ 60
Query: 247 AEIE---IISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLH---GKDRP--VMN 298
A + I + H H+V L+G C GS LV +++P +L H+ G P ++N
Sbjct: 61 AVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLN 119
Query: 299 WPTRMKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
W ++ A+G+ YL E ++HR++ + N+LL + +VADFG+A
Sbjct: 120 WGVQI------AKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVA 162
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 83/173 (47%), Gaps = 16/173 (9%)
Query: 186 GNFKSTFTYEELKIATDNFSEANLLGQGGFGYVHKGVL----TNGKVVAIKQLKAG-SGQ 240
G +FT E I ++G G G V G L VAIK LKAG + +
Sbjct: 36 GRAGRSFTRE---IEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTER 92
Query: 241 GEREFQAEIEIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHL--HGKDRPVMN 298
R+F +E I+ Q H +++ L G T G ++V E++ N +L+ L H +M
Sbjct: 93 QRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQ 152
Query: 299 WPTRMKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
++ G G+ YL + +HRD+ + N+L+D + KV+DFGL++
Sbjct: 153 LVGMLR---GVGAGMRYLSD---LGYVHRDLAARNVLVDSNLVCKVSDFGLSR 199
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 89/187 (47%), Gaps = 32/187 (17%)
Query: 202 DNFSEANLLGQGGFGYVHK----GVLTNG--KVVAIKQLKA-GSGQGEREFQAEIEIISQ 254
+N +G+G FG V + G+L +VA+K LK S + +FQ E ++++
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 106
Query: 255 VHHRHLVSLVGYCTFGSQRLLVYEFVPNKTL-EF---------------HLHGKDR---- 294
+ ++V L+G C G L++E++ L EF L + R
Sbjct: 107 FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSP 166
Query: 295 --PVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKH 352
P ++ ++ IA A G+AYL E K +HRD+ + N L+ ++ K+ADFGL+++
Sbjct: 167 GPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRN 223
Query: 353 SLDTDTH 359
D +
Sbjct: 224 IYSADYY 230
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 79/163 (48%), Gaps = 22/163 (13%)
Query: 209 LLGQGGFGYVHKGVL--TNGKVV--AIKQLKAGSGQGE-REFQAEIEIISQVHHRHLVSL 263
++G+G FG V+ G L +GK + A+K L + GE +F E I+ H +++SL
Sbjct: 55 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 114
Query: 264 VGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTR-------MKIALGSARGLAYL 316
+G C L E P L + HG R + T + L A+G+ YL
Sbjct: 115 LGIC-------LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL 167
Query: 317 HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTH 359
K +HRD+ + N +LD+ F KVADFGLA+ D + +
Sbjct: 168 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYY 207
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 81/158 (51%), Gaps = 14/158 (8%)
Query: 200 ATDNFSEANLLGQGGFGYVHKGVLTN-GKVVAIKQ-LKAGSGQGEREFQA-EIEIISQVH 256
+ + + L+G+G +G V K + G++VAIK+ L++ + ++ EI+++ Q+
Sbjct: 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLR 82
Query: 257 HRHLVSLVGYCTFGSQRLLVYEFVPNKTL---EFHLHGKDRPVMNWPTRMKIALGSARGL 313
H +LV+L+ C + LV+EFV + L E +G D V+ K G+
Sbjct: 83 HENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQ-----KYLFQIINGI 137
Query: 314 AYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ H IIHRDIK NIL+ S K+ DFG A+
Sbjct: 138 GFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFAR 172
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 80/156 (51%), Gaps = 13/156 (8%)
Query: 203 NFSEANLLGQGGFGYVHKGVL---TNGKV-VAIKQLKAGSGQGER-EFQAEIEIISQVHH 257
N S ++G G FG V G L + ++ VAIK LK G + +R +F E I+ Q H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 258 RHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHL--HGKDRPVMNWPTRMKIALGSARGLAY 315
+++ L G T ++V E++ N +L+ L H V+ ++ G A G+ Y
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMKY 162
Query: 316 LHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
L + +HRD+ + NIL++ + KV+DFGL +
Sbjct: 163 LSD---MGYVHRDLAARNILINSNLVCKVSDFGLGR 195
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 79/161 (49%), Gaps = 22/161 (13%)
Query: 209 LLGQGGFGYVHKGVL--TNGKVV--AIKQLKAGSGQGE-REFQAEIEIISQVHHRHLVSL 263
++G+G FG V+ G L +GK + A+K L + GE +F E I+ H +++SL
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 264 VGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTR-------MKIALGSARGLAYL 316
+G C L E P L + HG R + T + L A+G+ +L
Sbjct: 98 LGIC-------LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL 150
Query: 317 HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTD 357
K +HRD+ + N +LD+ F KVADFGLA+ LD +
Sbjct: 151 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKE 188
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 79/163 (48%), Gaps = 22/163 (13%)
Query: 209 LLGQGGFGYVHKGVL--TNGKVV--AIKQLKAGSGQGE-REFQAEIEIISQVHHRHLVSL 263
++G+G FG V+ G L +GK + A+K L + GE +F E I+ H +++SL
Sbjct: 29 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 88
Query: 264 VGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTR-------MKIALGSARGLAYL 316
+G C L E P L + HG R + T + L A+G+ YL
Sbjct: 89 LGIC-------LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL 141
Query: 317 HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTH 359
K +HRD+ + N +LD+ F KVADFGLA+ D + +
Sbjct: 142 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYY 181
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 79/163 (48%), Gaps = 22/163 (13%)
Query: 209 LLGQGGFGYVHKGVL--TNGKVV--AIKQLKAGSGQGE-REFQAEIEIISQVHHRHLVSL 263
++G+G FG V+ G L +GK + A+K L + GE +F E I+ H +++SL
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 264 VGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTR-------MKIALGSARGLAYL 316
+G C L E P L + HG R + T + L A+G+ YL
Sbjct: 97 LGIC-------LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL 149
Query: 317 HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTH 359
K +HRD+ + N +LD+ F KVADFGLA+ D + +
Sbjct: 150 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYY 189
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 74/154 (48%), Gaps = 21/154 (13%)
Query: 211 GQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQ--VHHRHLVSLVGYCT 268
+G FG V K L N VA+K Q ++ +Q+E EI S + H +L+ +
Sbjct: 24 ARGRFGCVWKAQLMN-DFVAVKIFPL---QDKQSWQSEREIFSTPGMKHENLLQFIAAEK 79
Query: 269 FGS----QRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDC---- 320
GS + L+ F +L +L G ++ W +A +RGL+YLHED
Sbjct: 80 RGSNLEVELWLITAFHDKGSLTDYLKGN---IITWNELCHVAETMSRGLSYLHEDVPWCR 136
Query: 321 ----QPKIIHRDIKSANILLDDSFEAKVADFGLA 350
+P I HRD KS N+LL A +ADFGLA
Sbjct: 137 GEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLA 170
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 79/163 (48%), Gaps = 22/163 (13%)
Query: 209 LLGQGGFGYVHKGVL--TNGKVV--AIKQLKAGSGQGE-REFQAEIEIISQVHHRHLVSL 263
++G+G FG V+ G L +GK + A+K L + GE +F E I+ H +++SL
Sbjct: 56 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 115
Query: 264 VGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTR-------MKIALGSARGLAYL 316
+G C L E P L + HG R + T + L A+G+ YL
Sbjct: 116 LGIC-------LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL 168
Query: 317 HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTH 359
K +HRD+ + N +LD+ F KVADFGLA+ D + +
Sbjct: 169 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYY 208
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 81/159 (50%), Gaps = 19/159 (11%)
Query: 203 NFSEANLLGQGGFGYVHKGVLT--NGKV---VAIKQLK-AGSGQGEREFQAEIEIISQVH 256
F + +LG G FG V+KG+ KV VAIK+L+ A S + +E E +++ V
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 72
Query: 257 HRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKD----RPVMNWPTRMKIALGSARG 312
+ H+ L+G C + +L+ L++ KD + ++NW ++ A G
Sbjct: 73 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AEG 126
Query: 313 LAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ YL + +++HRD+ + N+L+ K+ DFGLAK
Sbjct: 127 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 162
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 89/194 (45%), Gaps = 26/194 (13%)
Query: 174 KPFPRQSPGMPVGNFKSTFTYEELK---IATDNFSEANLLGQGGFGYVHKGVLTNGK-VV 229
+P P P S EE K A ++F LG+G FG V+ K ++
Sbjct: 3 QPLPSAPENNPEEELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFIL 62
Query: 230 AIKQL------KAGSGQGEREFQAEIEIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNK 283
A+K L KAG E + + E+EI S + H +++ L GY ++ L+ E+ P
Sbjct: 63 ALKVLFKAQLEKAGV---EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLG 119
Query: 284 TLEFHLHG----KDRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDS 339
T+ L ++ + T + A L+Y H ++IHRDIK N+LL +
Sbjct: 120 TVYRELQKLSKFDEQRTATYITEL------ANALSYCHSK---RVIHRDIKPENLLLGSA 170
Query: 340 FEAKVADFGLAKHS 353
E K+ADFG + H+
Sbjct: 171 GELKIADFGWSVHA 184
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 78/161 (48%), Gaps = 22/161 (13%)
Query: 209 LLGQGGFGYVHKGVL--TNGKVV--AIKQLKAGSGQGE-REFQAEIEIISQVHHRHLVSL 263
++G+G FG V+ G L +GK + A+K L + GE +F E I+ H +++SL
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 264 VGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTR-------MKIALGSARGLAYL 316
+G C L E P L + HG R + T + L A+G+ YL
Sbjct: 96 LGIC-------LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL 148
Query: 317 HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTD 357
K +HRD+ + N +LD+ F KVADFGLA+ D +
Sbjct: 149 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 186
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 80/149 (53%), Gaps = 11/149 (7%)
Query: 209 LLGQGGFGYVHKGVLTN-GK---VVAIKQLKAG-SGQGEREFQAEIEIISQVHHRHLVSL 263
++G G FG V G L GK VAIK LKAG + + R+F +E I+ Q H +++ L
Sbjct: 15 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHL 74
Query: 264 VGYCTFGSQRLLVYEFVPNKTLEFHLHGKD-RPVMNWPTRMKIALGSARGLAYLHEDCQP 322
G T +++ E++ N +L+ L D R + M +GS G+ YL +
Sbjct: 75 EGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGS--GMKYLSD---M 129
Query: 323 KIIHRDIKSANILLDDSFEAKVADFGLAK 351
+HRD+ + NIL++ + KV+DFG+++
Sbjct: 130 SYVHRDLAARNILVNSNLVCKVSDFGMSR 158
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 88/171 (51%), Gaps = 30/171 (17%)
Query: 198 KIATDNFSEANL-----LGQGGFGYVHKGVLT----NGKV-VAIKQLKAGSGQGEREFQA 247
K+ F E L LG G FG VHKGV + K+ V IK ++ SG+ + FQA
Sbjct: 22 KVLARIFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGR--QSFQA 79
Query: 248 EIE---IISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLH---GKDRP--VMNW 299
+ I + H H+V L+G C GS LV +++P +L H+ G P ++NW
Sbjct: 80 VTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNW 138
Query: 300 PTRMKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
++ A+G+ YL E ++HR++ + N+LL + +VADFG+A
Sbjct: 139 GVQI------AKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVA 180
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 79/163 (48%), Gaps = 22/163 (13%)
Query: 209 LLGQGGFGYVHKGVL--TNGKVV--AIKQLKAGSGQGE-REFQAEIEIISQVHHRHLVSL 263
++G+G FG V+ G L +GK + A+K L + GE +F E I+ H +++SL
Sbjct: 34 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 93
Query: 264 VGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTR-------MKIALGSARGLAYL 316
+G C L E P L + HG R + T + L A+G+ YL
Sbjct: 94 LGIC-------LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL 146
Query: 317 HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTH 359
K +HRD+ + N +LD+ F KVADFGLA+ D + +
Sbjct: 147 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYY 186
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 79/163 (48%), Gaps = 22/163 (13%)
Query: 209 LLGQGGFGYVHKGVL--TNGKVV--AIKQLKAGSGQGE-REFQAEIEIISQVHHRHLVSL 263
++G+G FG V+ G L +GK + A+K L + GE +F E I+ H +++SL
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 264 VGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTR-------MKIALGSARGLAYL 316
+G C L E P L + HG R + T + L A+G+ YL
Sbjct: 95 LGIC-------LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL 147
Query: 317 HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTH 359
K +HRD+ + N +LD+ F KVADFGLA+ D + +
Sbjct: 148 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYY 187
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 80/149 (53%), Gaps = 11/149 (7%)
Query: 209 LLGQGGFGYVHKGVLTN-GK---VVAIKQLKAG-SGQGEREFQAEIEIISQVHHRHLVSL 263
++G G FG V G L GK VAIK LKAG + + R+F +E I+ Q H +++ L
Sbjct: 21 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHL 80
Query: 264 VGYCTFGSQRLLVYEFVPNKTLEFHLHGKD-RPVMNWPTRMKIALGSARGLAYLHEDCQP 322
G T +++ E++ N +L+ L D R + M +GS G+ YL +
Sbjct: 81 EGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGS--GMKYLSD---M 135
Query: 323 KIIHRDIKSANILLDDSFEAKVADFGLAK 351
+HRD+ + NIL++ + KV+DFG+++
Sbjct: 136 SYVHRDLAARNILVNSNLVCKVSDFGMSR 164
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 92/183 (50%), Gaps = 21/183 (11%)
Query: 195 EELKIATDNFSEANLLGQGGFGYVHK----GVLTNGKV--VAIKQLKAGSGQGERE-FQA 247
E+ + +N LG G FG V + G+ V VA+K LK+ + E+E +
Sbjct: 31 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 90
Query: 248 EIEIISQV-HHRHLVSLVGYCTFGSQRLLVYEFVPNKTL--------EFHLHGKDRPVMN 298
E++I+S + H ++V+L+G CT G L++ E+ L E L +D +
Sbjct: 91 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLE 150
Query: 299 WPTRMKIALGSARGLAYL-HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTD 357
+ + A+G+A+L ++C IHRD+ + N+LL + AK+ DFGLA+ ++
Sbjct: 151 LRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 206
Query: 358 THV 360
++
Sbjct: 207 NYI 209
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 87/188 (46%), Gaps = 34/188 (18%)
Query: 203 NFSEANLLGQGGFGYVHKGVLTNGK------VVAIKQLKAGSGQGE-REFQAEIEIISQV 255
N LG+G FG V K + K VA+K LK + E R+ +E ++ QV
Sbjct: 24 NLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQV 83
Query: 256 HHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPV---------------MNWP 300
+H H++ L G C+ LL+ E+ +L L + R V ++ P
Sbjct: 84 NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLR-ESRKVGPGYLGSGGSRNSSSLDHP 142
Query: 301 TRMKIALGS--------ARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKH 352
+ +G ++G+ YL E K++HRD+ + NIL+ + + K++DFGL++
Sbjct: 143 DERALTMGDLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFGLSRD 199
Query: 353 SLDTDTHV 360
+ D+ V
Sbjct: 200 VYEEDSXV 207
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 69/148 (46%), Gaps = 5/148 (3%)
Query: 210 LGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLVGYCTF 269
LG G FG V VA+K +K GS E F AE ++ + H LV L T
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVE-AFLAEANVMKTLQHDKLVKLHAVVT- 80
Query: 270 GSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRDI 329
++ EF+ +L L + P + + A G+A++ Q IHRD+
Sbjct: 81 KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDL 137
Query: 330 KSANILLDDSFEAKVADFGLAKHSLDTD 357
++ANIL+ S K+ADFGLA+ D +
Sbjct: 138 RAANILVSASLVCKIADFGLARVIEDNE 165
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 79/163 (48%), Gaps = 22/163 (13%)
Query: 209 LLGQGGFGYVHKGVL--TNGKVV--AIKQLKAGSGQGE-REFQAEIEIISQVHHRHLVSL 263
++G+G FG V+ G L +GK + A+K L + GE +F E I+ H +++SL
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 264 VGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTR-------MKIALGSARGLAYL 316
+G C L E P L + HG R + T + L A+G+ YL
Sbjct: 96 LGIC-------LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL 148
Query: 317 HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTH 359
K +HRD+ + N +LD+ F KVADFGLA+ D + +
Sbjct: 149 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYY 188
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 79/163 (48%), Gaps = 22/163 (13%)
Query: 209 LLGQGGFGYVHKGVL--TNGKVV--AIKQLKAGSGQGE-REFQAEIEIISQVHHRHLVSL 263
++G+G FG V+ G L +GK + A+K L + GE +F E I+ H +++SL
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 264 VGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTR-------MKIALGSARGLAYL 316
+G C L E P L + HG R + T + L A+G+ YL
Sbjct: 97 LGIC-------LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL 149
Query: 317 HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTH 359
K +HRD+ + N +LD+ F KVADFGLA+ D + +
Sbjct: 150 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYY 189
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 89/194 (45%), Gaps = 26/194 (13%)
Query: 174 KPFPRQSPGMPVGNFKSTFTYEELK---IATDNFSEANLLGQGGFGYVHKGVLTNGK-VV 229
+P P P S EE K A ++F LG+G FG V+ K ++
Sbjct: 3 QPLPSAPENNPEEELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFIL 62
Query: 230 AIKQL------KAGSGQGEREFQAEIEIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNK 283
A+K L KAG E + + E+EI S + H +++ L GY ++ L+ E+ P
Sbjct: 63 ALKVLFKAQLEKAGV---EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLG 119
Query: 284 TLEFHLHG----KDRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDS 339
T+ L ++ + T + A L+Y H ++IHRDIK N+LL +
Sbjct: 120 TVYRELQKLSKFDEQRTATYITEL------ANALSYCH---SKRVIHRDIKPENLLLGSA 170
Query: 340 FEAKVADFGLAKHS 353
E K+ADFG + H+
Sbjct: 171 GELKIADFGWSVHA 184
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 80/166 (48%), Gaps = 10/166 (6%)
Query: 199 IATDNFSEANLLGQGGFGYVHKGVLTNGK----VVAIKQLKAGSGQGERE-FQAEIEIIS 253
IA ++ +LG+G FG V++GV TN K VA+K K +E F +E I+
Sbjct: 21 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMK 80
Query: 254 QVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGL 313
+ H H+V L+G ++ E P L +L +++ + T + +L + +
Sbjct: 81 NLDHPHIVKLIGIIE-EEPTWIIMELYPYGELGHYLE-RNKNSLKVLTLVLYSLQICKAM 138
Query: 314 AYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTH 359
AYL +HRDI NIL+ K+ DFGL+++ D D +
Sbjct: 139 AYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYY 181
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 79/163 (48%), Gaps = 22/163 (13%)
Query: 209 LLGQGGFGYVHKGVL--TNGKVV--AIKQLKAGSGQGE-REFQAEIEIISQVHHRHLVSL 263
++G+G FG V+ G L +GK + A+K L + GE +F E I+ H +++SL
Sbjct: 32 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 91
Query: 264 VGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTR-------MKIALGSARGLAYL 316
+G C L E P L + HG R + T + L A+G+ YL
Sbjct: 92 LGIC-------LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL 144
Query: 317 HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTH 359
K +HRD+ + N +LD+ F KVADFGLA+ D + +
Sbjct: 145 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYY 184
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 92/183 (50%), Gaps = 21/183 (11%)
Query: 195 EELKIATDNFSEANLLGQGGFGYVHK----GVLTNGKV--VAIKQLKAGSGQGERE-FQA 247
E+ + +N LG G FG V + G+ V VA+K LK+ + E+E +
Sbjct: 39 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 98
Query: 248 EIEIISQV-HHRHLVSLVGYCTFGSQRLLVYEFVPNKTL--------EFHLHGKDRPVMN 298
E++I+S + H ++V+L+G CT G L++ E+ L E L +D +
Sbjct: 99 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLE 158
Query: 299 WPTRMKIALGSARGLAYL-HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTD 357
+ + A+G+A+L ++C IHRD+ + N+LL + AK+ DFGLA+ ++
Sbjct: 159 LRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 214
Query: 358 THV 360
++
Sbjct: 215 NYI 217
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 80/166 (48%), Gaps = 10/166 (6%)
Query: 199 IATDNFSEANLLGQGGFGYVHKGVLTNGK----VVAIKQLKAGSGQGERE-FQAEIEIIS 253
IA ++ +LG+G FG V++GV TN K VA+K K +E F +E I+
Sbjct: 5 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMK 64
Query: 254 QVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGL 313
+ H H+V L+G ++ E P L +L +++ + T + +L + +
Sbjct: 65 NLDHPHIVKLIGIIE-EEPTWIIMELYPYGELGHYLE-RNKNSLKVLTLVLYSLQICKAM 122
Query: 314 AYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTH 359
AYL +HRDI NIL+ K+ DFGL+++ D D +
Sbjct: 123 AYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYY 165
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 34/208 (16%)
Query: 168 GSLDSDK-PFPRQSPGMPVGNFKSTFTYEELKIATDNFSEANLLGQGGFGYVHK----GV 222
G++D D+ P +P K F + LK+ LG+G FG V + G+
Sbjct: 1 GAMDPDELPLDEHCERLPYDASKWEFPRDRLKLGKP-------LGRGAFGQVIEADAFGI 53
Query: 223 --LTNGKVVAIKQLKAGSGQGE-REFQAEIEIISQV-HHRHLVSLVGYCTF-GSQRLLVY 277
+ VA+K LK G+ E R +E++I+ + HH ++V+L+G CT G +++
Sbjct: 54 DKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 113
Query: 278 EFVPNKTLEFHLHGKD--------------RPVMNWPTRMKIALGSARGLAYLHEDCQPK 323
EF L +L K + + + + A+G+ +L K
Sbjct: 114 EFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRK 170
Query: 324 IIHRDIKSANILLDDSFEAKVADFGLAK 351
IHRD+ + NILL + K+ DFGLA+
Sbjct: 171 CIHRDLAARNILLSEKNVVKICDFGLAR 198
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 80/166 (48%), Gaps = 10/166 (6%)
Query: 199 IATDNFSEANLLGQGGFGYVHKGVLTNGK----VVAIKQLKAGSGQGERE-FQAEIEIIS 253
IA ++ +LG+G FG V++GV TN K VA+K K +E F +E I+
Sbjct: 9 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMK 68
Query: 254 QVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGL 313
+ H H+V L+G ++ E P L +L +++ + T + +L + +
Sbjct: 69 NLDHPHIVKLIGIIE-EEPTWIIMELYPYGELGHYLE-RNKNSLKVLTLVLYSLQICKAM 126
Query: 314 AYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTH 359
AYL +HRDI NIL+ K+ DFGL+++ D D +
Sbjct: 127 AYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYY 169
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 80/164 (48%), Gaps = 22/164 (13%)
Query: 208 NLLGQGGFGYVHKGVLT----NGKVVAIKQL-KAGSGQGEREFQAEIEIISQVHHRHLVS 262
++G+G FG V+ G N AIK L + Q F E ++ ++H ++++
Sbjct: 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLA 86
Query: 263 LVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTR-------MKIALGSARGLAY 315
L+G +L E +P+ L + HG + P R + L ARG+ Y
Sbjct: 87 LIGI-------MLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEY 139
Query: 316 LHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTH 359
L E K +HRD+ + N +LD+SF KVADFGLA+ LD + +
Sbjct: 140 LAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYY 180
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 81/159 (50%), Gaps = 19/159 (11%)
Query: 203 NFSEANLLGQGGFGYVHKGVLT--NGKV---VAIKQLK-AGSGQGEREFQAEIEIISQVH 256
F + +LG G FG V+KG+ KV VAI +L+ A S + +E E +++ V
Sbjct: 50 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVD 109
Query: 257 HRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKD----RPVMNWPTRMKIALGSARG 312
+ H+ L+G C + +L+ L++ KD + ++NW ++ A+G
Sbjct: 110 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 163
Query: 313 LAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ YL + +++HRD+ + N+L+ K+ DFGLAK
Sbjct: 164 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 199
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 67/142 (47%), Gaps = 5/142 (3%)
Query: 210 LGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLVGYCTF 269
LG G FG V VA+K +K GS E F AE ++ + H LV L T
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVE-AFLAEANVMKTLQHDKLVKLHAVVT- 247
Query: 270 GSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRDI 329
++ EF+ +L L + P + + A G+A++ Q IHRD+
Sbjct: 248 KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDL 304
Query: 330 KSANILLDDSFEAKVADFGLAK 351
++ANIL+ S K+ADFGLA+
Sbjct: 305 RAANILVSASLVCKIADFGLAR 326
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 82/159 (51%), Gaps = 19/159 (11%)
Query: 203 NFSEANLLGQGGFGYVHKGVLT--NGKV---VAIKQLK-AGSGQGEREFQAEIEIISQVH 256
F + +L G FG V+KG+ KV VAIK+L+ A S + +E E +++ V
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 257 HRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKD----RPVMNWPTRMKIALGSARG 312
+ H+ L+G C + +L++ L++ KD + ++NW ++ A+G
Sbjct: 83 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 136
Query: 313 LAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ YL + +++HRD+ + N+L+ K+ DFGLAK
Sbjct: 137 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 172
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 82/159 (51%), Gaps = 19/159 (11%)
Query: 203 NFSEANLLGQGGFGYVHKGVLT--NGKV---VAIKQLK-AGSGQGEREFQAEIEIISQVH 256
F + +LG G FG V+KG+ KV VAIK+L+ A S + +E E +++ V
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 257 HRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKD----RPVMNWPTRMKIALGSARG 312
+ H+ L+G C + +L++ L++ KD + ++NW ++ A+G
Sbjct: 80 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 133
Query: 313 LAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ YL + +++HRD+ + N+L+ K+ DFG AK
Sbjct: 134 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAK 169
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 69/148 (46%), Gaps = 5/148 (3%)
Query: 210 LGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLVGYCTF 269
LG G FG V VA+K +K GS E F AE ++ + H LV L T
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVE-AFLAEANVMKTLQHDKLVKLHAVVT- 253
Query: 270 GSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRDI 329
++ EF+ +L L + P + + A G+A++ Q IHRD+
Sbjct: 254 KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDL 310
Query: 330 KSANILLDDSFEAKVADFGLAKHSLDTD 357
++ANIL+ S K+ADFGLA+ D +
Sbjct: 311 RAANILVSASLVCKIADFGLARVIEDNE 338
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 85/171 (49%), Gaps = 15/171 (8%)
Query: 190 STFTYEELKIATD--NFSEANLLGQGGFGYVHKGVL---TNGKV-VAIKQLKAGSGQGER 243
ST T E D N S ++G G FG V G L + ++ VAIK LK G + +R
Sbjct: 2 STQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 61
Query: 244 -EFQAEIEIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHL--HGKDRPVMNWP 300
+F E I+ Q H +++ L G T ++V E + N +L+ L H V+
Sbjct: 62 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLV 121
Query: 301 TRMKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
++ G A G+ YL + +HRD+ + NIL++ + KV+DFGL++
Sbjct: 122 GMLR---GIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSR 166
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 75/153 (49%), Gaps = 7/153 (4%)
Query: 204 FSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVS 262
F LG+G +G V+K + G++VAIKQ+ S +E EI I+ Q H+V
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDL--QEIIKEISIMQQCDSPHVVK 88
Query: 263 LVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQP 322
G + +V E+ ++ + +++ + I + +GL YLH
Sbjct: 89 YYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTE-DEIATILQSTLKGLEYLH---FM 144
Query: 323 KIIHRDIKSANILLDDSFEAKVADFGLAKHSLD 355
+ IHRDIK+ NILL+ AK+ADFG+A D
Sbjct: 145 RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTD 177
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 82/159 (51%), Gaps = 19/159 (11%)
Query: 203 NFSEANLLGQGGFGYVHKGVLT--NGKV---VAIKQLK-AGSGQGEREFQAEIEIISQVH 256
F + +LG G FG V+KG+ KV VAIK+L+ A S + +E E +++ V
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 257 HRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKD----RPVMNWPTRMKIALGSARG 312
+ H+ L+G C + +L++ L++ KD + ++NW ++ A+G
Sbjct: 78 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 131
Query: 313 LAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ YL + +++HRD+ + N+L+ K+ DFG AK
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAK 167
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 82/159 (51%), Gaps = 19/159 (11%)
Query: 203 NFSEANLLGQGGFGYVHKGVLT--NGKV---VAIKQLK-AGSGQGEREFQAEIEIISQVH 256
F + +LG G FG V+KG+ KV VAIK+L+ A S + +E E +++ V
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 257 HRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKD----RPVMNWPTRMKIALGSARG 312
+ H+ L+G C + +L++ L++ KD + ++NW ++ A+G
Sbjct: 78 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 131
Query: 313 LAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ YL + +++HRD+ + N+L+ K+ DFG AK
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAK 167
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 80/156 (51%), Gaps = 13/156 (8%)
Query: 203 NFSEANLLGQGGFGYVHKGVL---TNGKV-VAIKQLKAGSGQGER-EFQAEIEIISQVHH 257
N S ++G G FG V G L + ++ VAIK LK G + +R +F E I+ Q H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 258 RHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHL--HGKDRPVMNWPTRMKIALGSARGLAY 315
+++ L G T ++V E + N +L+ L H V+ ++ G A G+ Y
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMKY 162
Query: 316 LHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
L + +HRD+ + NIL++ + KV+DFGL++
Sbjct: 163 LSD---MGAVHRDLAARNILINSNLVCKVSDFGLSR 195
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 81/159 (50%), Gaps = 19/159 (11%)
Query: 203 NFSEANLLGQGGFGYVHKGVLT--NGKV---VAIKQLK-AGSGQGEREFQAEIEIISQVH 256
F + +L G FG V+KG+ KV VAIK+L+ A S + +E E +++ V
Sbjct: 16 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 257 HRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKD----RPVMNWPTRMKIALGSARG 312
+ H+ L+G C + +L+ L++ KD + ++NW ++ A+G
Sbjct: 76 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 129
Query: 313 LAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ YL + +++HRD+ + N+L+ K+ DFGLAK
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 165
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 81/159 (50%), Gaps = 19/159 (11%)
Query: 203 NFSEANLLGQGGFGYVHKGVLT--NGKV---VAIKQLK-AGSGQGEREFQAEIEIISQVH 256
F + +L G FG V+KG+ KV VAIK+L+ A S + +E E +++ V
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 257 HRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKD----RPVMNWPTRMKIALGSARG 312
+ H+ L+G C + +L+ L++ KD + ++NW ++ A+G
Sbjct: 83 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 136
Query: 313 LAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ YL + +++HRD+ + N+L+ K+ DFGLAK
Sbjct: 137 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 172
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 80/156 (51%), Gaps = 13/156 (8%)
Query: 203 NFSEANLLGQGGFGYVHKGVL---TNGKV-VAIKQLKAGSGQGER-EFQAEIEIISQVHH 257
N S ++G G FG V G L + ++ VAIK LK G + +R +F E I+ Q H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 258 RHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHL--HGKDRPVMNWPTRMKIALGSARGLAY 315
+++ L G T ++V E + N +L+ L H V+ ++ G A G+ Y
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR---GIASGMKY 162
Query: 316 LHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
L + +HRD+ + NIL++ + KV+DFGL++
Sbjct: 163 LSD---MGYVHRDLAARNILINSNLVCKVSDFGLSR 195
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 9/158 (5%)
Query: 199 IATDNFSEANLLGQGGFGYVHKGVL-TNGKVVAIKQLKAGSGQGEREFQ---AEIEIISQ 254
+ D F + +LG+GGFG V + GK+ A K+L + + +Q E +I+++
Sbjct: 182 MGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAK 241
Query: 255 VHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHG--KDRPVMNWPTRMKIALGSARG 312
VH R +VSL + LV + + +H++ +D P P + G
Sbjct: 242 VHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSG 301
Query: 313 LAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
L +LH Q II+RD+K N+LLDD +++D GLA
Sbjct: 302 LEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLA 336
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 94/189 (49%), Gaps = 27/189 (14%)
Query: 195 EELKIATDNFSEANLLGQGGFGYVHK----GVLTNGKV--VAIKQLKAGSGQGERE-FQA 247
E+ + +N LG G FG V + G+ V VA+K LK+ + E+E +
Sbjct: 39 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 98
Query: 248 EIEIISQV-HHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWP------ 300
E++I+S + H ++V+L+G CT G L++ E+ L L K P + +
Sbjct: 99 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHN 158
Query: 301 ------TRMKIALGS--ARGLAYL-HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+R + S A+G+A+L ++C IHRD+ + N+LL + AK+ DFGLA+
Sbjct: 159 PEEQLSSRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLAR 214
Query: 352 HSLDTDTHV 360
++ ++
Sbjct: 215 DIMNDSNYI 223
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 9/158 (5%)
Query: 199 IATDNFSEANLLGQGGFGYVHKGVL-TNGKVVAIKQLKAGSGQGEREFQ---AEIEIISQ 254
+ D F + +LG+GGFG V + GK+ A K+L + + +Q E +I+++
Sbjct: 182 MGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAK 241
Query: 255 VHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHG--KDRPVMNWPTRMKIALGSARG 312
VH R +VSL + LV + + +H++ +D P P + G
Sbjct: 242 VHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSG 301
Query: 313 LAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
L +LH Q II+RD+K N+LLDD +++D GLA
Sbjct: 302 LEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLA 336
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 78/161 (48%), Gaps = 22/161 (13%)
Query: 209 LLGQGGFGYVHKGVL--TNGKVV--AIKQLKAGSGQGE-REFQAEIEIISQVHHRHLVSL 263
++G+G FG V+ G L +GK + A+K L + GE +F E I+ H +++SL
Sbjct: 96 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 155
Query: 264 VGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTR-------MKIALGSARGLAYL 316
+G C L E P L + HG R + T + L A+G+ +L
Sbjct: 156 LGIC-------LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL 208
Query: 317 HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTD 357
K +HRD+ + N +LD+ F KVADFGLA+ D +
Sbjct: 209 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 246
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 81/159 (50%), Gaps = 19/159 (11%)
Query: 203 NFSEANLLGQGGFGYVHKGVLT--NGKV---VAIKQLK-AGSGQGEREFQAEIEIISQVH 256
F + +LG G FG V+KG+ KV VAIK+L+ A S + +E E +++ V
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 257 HRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKD----RPVMNWPTRMKIALGSARG 312
+ H+ L+G C + +L+ L++ KD + ++NW ++ A+G
Sbjct: 78 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 131
Query: 313 LAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ YL + +++HRD+ + N+L+ K+ DFG AK
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAK 167
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 9/158 (5%)
Query: 199 IATDNFSEANLLGQGGFGYVHKGVL-TNGKVVAIKQLKAGSGQGEREFQ---AEIEIISQ 254
+ D F + +LG+GGFG V + GK+ A K+L + + +Q E +I+++
Sbjct: 182 MGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAK 241
Query: 255 VHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHG--KDRPVMNWPTRMKIALGSARG 312
VH R +VSL + LV + + +H++ +D P P + G
Sbjct: 242 VHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSG 301
Query: 313 LAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
L +LH Q II+RD+K N+LLDD +++D GLA
Sbjct: 302 LEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLA 336
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 9/158 (5%)
Query: 199 IATDNFSEANLLGQGGFGYVHKGVL-TNGKVVAIKQLKAGSGQGEREFQ---AEIEIISQ 254
+ D F + +LG+GGFG V + GK+ A K+L + + +Q E +I+++
Sbjct: 182 MGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAK 241
Query: 255 VHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHG--KDRPVMNWPTRMKIALGSARG 312
VH R +VSL + LV + + +H++ +D P P + G
Sbjct: 242 VHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSG 301
Query: 313 LAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
L +LH Q II+RD+K N+LLDD +++D GLA
Sbjct: 302 LEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLA 336
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 81/159 (50%), Gaps = 19/159 (11%)
Query: 203 NFSEANLLGQGGFGYVHKGVLT--NGKV---VAIKQLK-AGSGQGEREFQAEIEIISQVH 256
F + +LG G FG V+KG+ KV VAIK+L+ A S + +E E +++ V
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 257 HRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKD----RPVMNWPTRMKIALGSARG 312
+ H+ L+G C + +L+ L++ KD + ++NW ++ A+G
Sbjct: 76 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 129
Query: 313 LAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ YL + +++HRD+ + N+L+ K+ DFG AK
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAK 165
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 81/159 (50%), Gaps = 19/159 (11%)
Query: 203 NFSEANLLGQGGFGYVHKGVLT--NGKV---VAIKQLK-AGSGQGEREFQAEIEIISQVH 256
F + +LG G FG V+KG+ KV VAIK+L+ A S + +E E +++ V
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 257 HRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKD----RPVMNWPTRMKIALGSARG 312
+ H+ L+G C + +L+ L++ KD + ++NW ++ A+G
Sbjct: 83 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 136
Query: 313 LAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ YL + +++HRD+ + N+L+ K+ DFG AK
Sbjct: 137 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAK 172
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 81/165 (49%), Gaps = 23/165 (13%)
Query: 200 ATDNFSEANLLGQGGFGYVHKGVLTNGK-VVAIKQL------KAGSGQGEREFQAEIEII 252
A ++F LG+G FG V+ K ++A+K L KAG E + + E+EI
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV---EHQLRREVEIQ 79
Query: 253 SQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHG----KDRPVMNWPTRMKIALG 308
S + H +++ L GY ++ L+ E+ P T+ L ++ + T +
Sbjct: 80 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL----- 134
Query: 309 SARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHS 353
A L+Y H ++IHRDIK N+LL + E K+ADFG + H+
Sbjct: 135 -ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHA 175
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 81/165 (49%), Gaps = 23/165 (13%)
Query: 200 ATDNFSEANLLGQGGFGYVHKGVLTNGK-VVAIKQL------KAGSGQGEREFQAEIEII 252
A ++F LG+G FG V+ K ++A+K L KAG E + + E+EI
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV---EHQLRREVEIQ 62
Query: 253 SQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHG----KDRPVMNWPTRMKIALG 308
S + H +++ L GY ++ L+ E+ P T+ L ++ + T +
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL----- 117
Query: 309 SARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHS 353
A L+Y H ++IHRDIK N+LL + E K+ADFG + H+
Sbjct: 118 -ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHA 158
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 81/165 (49%), Gaps = 23/165 (13%)
Query: 200 ATDNFSEANLLGQGGFGYVHKGVLTNGK-VVAIKQL------KAGSGQGEREFQAEIEII 252
A ++F LG+G FG V+ K ++A+K L KAG E + + E+EI
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV---EHQLRREVEIQ 62
Query: 253 SQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHG----KDRPVMNWPTRMKIALG 308
S + H +++ L GY ++ L+ E+ P T+ L ++ + T +
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL----- 117
Query: 309 SARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHS 353
A L+Y H ++IHRDIK N+LL + E K+ADFG + H+
Sbjct: 118 -ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHA 158
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 81/165 (49%), Gaps = 23/165 (13%)
Query: 200 ATDNFSEANLLGQGGFGYVHKGVLTNGK-VVAIKQL------KAGSGQGEREFQAEIEII 252
A ++F LG+G FG V+ K ++A+K L KAG E + + E+EI
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV---EHQLRREVEIQ 63
Query: 253 SQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHG----KDRPVMNWPTRMKIALG 308
S + H +++ L GY ++ L+ E+ P T+ L ++ + T +
Sbjct: 64 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL----- 118
Query: 309 SARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHS 353
A L+Y H ++IHRDIK N+LL + E K+ADFG + H+
Sbjct: 119 -ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSCHA 159
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 78/161 (48%), Gaps = 22/161 (13%)
Query: 209 LLGQGGFGYVHKGVL--TNGKVV--AIKQLKAGSGQGE-REFQAEIEIISQVHHRHLVSL 263
++G+G FG V+ G L +GK + A+K L + GE +F E I+ H +++SL
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 264 VGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTR-------MKIALGSARGLAYL 316
+G C L E P L + HG R + T + L A+G+ +L
Sbjct: 97 LGIC-------LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL 149
Query: 317 HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTD 357
K +HRD+ + N +LD+ F KVADFGLA+ D +
Sbjct: 150 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 187
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 78/161 (48%), Gaps = 22/161 (13%)
Query: 209 LLGQGGFGYVHKGVL--TNGKVV--AIKQLKAGSGQGE-REFQAEIEIISQVHHRHLVSL 263
++G+G FG V+ G L +GK + A+K L + GE +F E I+ H +++SL
Sbjct: 42 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 101
Query: 264 VGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTR-------MKIALGSARGLAYL 316
+G C L E P L + HG R + T + L A+G+ +L
Sbjct: 102 LGIC-------LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL 154
Query: 317 HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTD 357
K +HRD+ + N +LD+ F KVADFGLA+ D +
Sbjct: 155 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 192
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 78/161 (48%), Gaps = 22/161 (13%)
Query: 209 LLGQGGFGYVHKGVL--TNGKVV--AIKQLKAGSGQGE-REFQAEIEIISQVHHRHLVSL 263
++G+G FG V+ G L +GK + A+K L + GE +F E I+ H +++SL
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 264 VGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTR-------MKIALGSARGLAYL 316
+G C L E P L + HG R + T + L A+G+ +L
Sbjct: 97 LGIC-------LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL 149
Query: 317 HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTD 357
K +HRD+ + N +LD+ F KVADFGLA+ D +
Sbjct: 150 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 187
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 81/165 (49%), Gaps = 23/165 (13%)
Query: 200 ATDNFSEANLLGQGGFGYVHKGVLTNGK-VVAIKQL------KAGSGQGEREFQAEIEII 252
A ++F LG+G FG V+ K ++A+K L KAG E + + E+EI
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV---EHQLRREVEIQ 67
Query: 253 SQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHG----KDRPVMNWPTRMKIALG 308
S + H +++ L GY ++ L+ E+ P T+ L ++ + T +
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL----- 122
Query: 309 SARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHS 353
A L+Y H ++IHRDIK N+LL + E K+ADFG + H+
Sbjct: 123 -ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHA 163
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 84/157 (53%), Gaps = 14/157 (8%)
Query: 209 LLGQGGFGYVHKGVLTN-GK---VVAIKQLKAGSGQGER-EFQAEIEIISQVHHRHLVSL 263
++G G FG V G L GK VAIK LK+G + +R +F +E I+ Q H +++ L
Sbjct: 14 VIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHL 73
Query: 264 VGYCTFGSQRLLVYEFVPNKTLEFHLHGKDR--PVMNWPTRMKIALGSARGLAYLHEDCQ 321
G T + +++ EF+ N +L+ L D V+ ++ G A G+ YL +
Sbjct: 74 EGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLR---GIAAGMKYLAD--- 127
Query: 322 PKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDT 358
+HR + + NIL++ + KV+DFGL++ L+ DT
Sbjct: 128 MNYVHRALAARNILVNSNLVCKVSDFGLSRF-LEDDT 163
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 78/161 (48%), Gaps = 22/161 (13%)
Query: 209 LLGQGGFGYVHKGVL--TNGKVV--AIKQLKAGSGQGE-REFQAEIEIISQVHHRHLVSL 263
++G+G FG V+ G L +GK + A+K L + GE +F E I+ H +++SL
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 264 VGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTR-------MKIALGSARGLAYL 316
+G C L E P L + HG R + T + L A+G+ +L
Sbjct: 95 LGIC-------LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL 147
Query: 317 HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTD 357
K +HRD+ + N +LD+ F KVADFGLA+ D +
Sbjct: 148 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 185
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 81/165 (49%), Gaps = 23/165 (13%)
Query: 200 ATDNFSEANLLGQGGFGYVHKGVLTNGK-VVAIKQL------KAGSGQGEREFQAEIEII 252
A ++F LG+G FG V+ K ++A+K L KAG E + + E+EI
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV---EHQLRREVEIQ 63
Query: 253 SQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHG----KDRPVMNWPTRMKIALG 308
S + H +++ L GY ++ L+ E+ P T+ L ++ + T +
Sbjct: 64 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL----- 118
Query: 309 SARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHS 353
A L+Y H ++IHRDIK N+LL + E K+ADFG + H+
Sbjct: 119 -ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHA 159
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 81/165 (49%), Gaps = 23/165 (13%)
Query: 200 ATDNFSEANLLGQGGFGYVHKGVLTNGK-VVAIKQL------KAGSGQGEREFQAEIEII 252
A ++F LG+G FG V+ K ++A+K L KAG E + + E+EI
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV---EHQLRREVEIQ 63
Query: 253 SQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHG----KDRPVMNWPTRMKIALG 308
S + H +++ L GY ++ L+ E+ P T+ L ++ + T +
Sbjct: 64 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL----- 118
Query: 309 SARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHS 353
A L+Y H ++IHRDIK N+LL + E K+ADFG + H+
Sbjct: 119 -ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHA 159
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 78/161 (48%), Gaps = 22/161 (13%)
Query: 209 LLGQGGFGYVHKGVL--TNGKVV--AIKQLKAGSGQGE-REFQAEIEIISQVHHRHLVSL 263
++G+G FG V+ G L +GK + A+K L + GE +F E I+ H +++SL
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 264 VGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTR-------MKIALGSARGLAYL 316
+G C L E P L + HG R + T + L A+G+ +L
Sbjct: 98 LGIC-------LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL 150
Query: 317 HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTD 357
K +HRD+ + N +LD+ F KVADFGLA+ D +
Sbjct: 151 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 188
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 80/164 (48%), Gaps = 25/164 (15%)
Query: 210 LGQGGFGYVHK----GV--LTNGKVVAIKQLKAGSGQGE-REFQAEIEIISQV-HHRHLV 261
LG+G FG V + G+ + VA+K LK G+ E R +E++I+ + HH ++V
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 262 SLVGYCTF-GSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPT-------------RMKIAL 307
+L+G CT G +++ EF L +L K + + T + +
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 308 GSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
A+G+ +L K IHRD+ + NILL + K+ DFGLA+
Sbjct: 156 QVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 81/165 (49%), Gaps = 23/165 (13%)
Query: 200 ATDNFSEANLLGQGGFGYVHKGVLTNGK-VVAIKQL------KAGSGQGEREFQAEIEII 252
A ++F LG+G FG V+ K ++A+K L KAG E + + E+EI
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV---EHQLRREVEIQ 65
Query: 253 SQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHG----KDRPVMNWPTRMKIALG 308
S + H +++ L GY ++ L+ E+ P T+ L ++ + T +
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL----- 120
Query: 309 SARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHS 353
A L+Y H ++IHRDIK N+LL + E K+ADFG + H+
Sbjct: 121 -ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHA 161
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 81/165 (49%), Gaps = 23/165 (13%)
Query: 200 ATDNFSEANLLGQGGFGYVHKGVLTNGK-VVAIKQL------KAGSGQGEREFQAEIEII 252
A ++F LG+G FG V+ K ++A+K L KAG E + + E+EI
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV---EHQLRREVEIQ 62
Query: 253 SQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHG----KDRPVMNWPTRMKIALG 308
S + H +++ L GY ++ L+ E+ P T+ L ++ + T +
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL----- 117
Query: 309 SARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHS 353
A L+Y H ++IHRDIK N+LL + E K+ADFG + H+
Sbjct: 118 -ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHA 158
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 81/165 (49%), Gaps = 23/165 (13%)
Query: 200 ATDNFSEANLLGQGGFGYVHKGVLTNGK-VVAIKQL------KAGSGQGEREFQAEIEII 252
A ++F LG+G FG V+ K ++A+K L KAG E + + E+EI
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV---EHQLRREVEIQ 67
Query: 253 SQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHG----KDRPVMNWPTRMKIALG 308
S + H +++ L GY ++ L+ E+ P T+ L ++ + T +
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL----- 122
Query: 309 SARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHS 353
A L+Y H ++IHRDIK N+LL + E K+ADFG + H+
Sbjct: 123 -ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHA 163
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 81/165 (49%), Gaps = 23/165 (13%)
Query: 200 ATDNFSEANLLGQGGFGYVHKGVLTNGK-VVAIKQL------KAGSGQGEREFQAEIEII 252
A ++F LG+G FG V+ K ++A+K L KAG E + + E+EI
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV---EHQLRREVEIQ 65
Query: 253 SQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHG----KDRPVMNWPTRMKIALG 308
S + H +++ L GY ++ L+ E+ P T+ L ++ + T +
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL----- 120
Query: 309 SARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHS 353
A L+Y H ++IHRDIK N+LL + E K+ADFG + H+
Sbjct: 121 -ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHA 161
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 81/165 (49%), Gaps = 23/165 (13%)
Query: 200 ATDNFSEANLLGQGGFGYVHKGVLTNGK-VVAIKQL------KAGSGQGEREFQAEIEII 252
A ++F LG+G FG V+ K ++A+K L KAG E + + E+EI
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV---EHQLRREVEIQ 65
Query: 253 SQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHG----KDRPVMNWPTRMKIALG 308
S + H +++ L GY ++ L+ E+ P T+ L ++ + T +
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL----- 120
Query: 309 SARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHS 353
A L+Y H ++IHRDIK N+LL + E K+ADFG + H+
Sbjct: 121 -ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHA 161
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 81/165 (49%), Gaps = 23/165 (13%)
Query: 200 ATDNFSEANLLGQGGFGYVHKGVLTNGK-VVAIKQL------KAGSGQGEREFQAEIEII 252
A ++F LG+G FG V+ K ++A+K L KAG E + + E+EI
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV---EHQLRREVEIQ 67
Query: 253 SQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHG----KDRPVMNWPTRMKIALG 308
S + H +++ L GY ++ L+ E+ P T+ L ++ + T +
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL----- 122
Query: 309 SARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHS 353
A L+Y H ++IHRDIK N+LL + E K+ADFG + H+
Sbjct: 123 -ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHA 163
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 81/165 (49%), Gaps = 23/165 (13%)
Query: 200 ATDNFSEANLLGQGGFGYVHKGVLTNGK-VVAIKQL------KAGSGQGEREFQAEIEII 252
A ++F LG+G FG V+ K ++A+K L KAG E + + E+EI
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV---EHQLRREVEIQ 64
Query: 253 SQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHG----KDRPVMNWPTRMKIALG 308
S + H +++ L GY ++ L+ E+ P T+ L ++ + T +
Sbjct: 65 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL----- 119
Query: 309 SARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHS 353
A L+Y H ++IHRDIK N+LL + E K+ADFG + H+
Sbjct: 120 -ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHA 160
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 81/165 (49%), Gaps = 23/165 (13%)
Query: 200 ATDNFSEANLLGQGGFGYVHKGVLTNGK-VVAIKQL------KAGSGQGEREFQAEIEII 252
A ++F LG+G FG V+ K ++A+K L KAG E + + E+EI
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV---EHQLRREVEIQ 61
Query: 253 SQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHG----KDRPVMNWPTRMKIALG 308
S + H +++ L GY ++ L+ E+ P T+ L ++ + T +
Sbjct: 62 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL----- 116
Query: 309 SARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHS 353
A L+Y H ++IHRDIK N+LL + E K+ADFG + H+
Sbjct: 117 -ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHA 157
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 86/188 (45%), Gaps = 34/188 (18%)
Query: 203 NFSEANLLGQGGFGYVHKGVLTNGK------VVAIKQLKAGSGQGE-REFQAEIEIISQV 255
N LG+G FG V K + K VA+K LK + E R+ +E ++ QV
Sbjct: 24 NLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQV 83
Query: 256 HHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPV---------------MNWP 300
+H H++ L G C+ LL+ E+ +L L + R V ++ P
Sbjct: 84 NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLR-ESRKVGPGYLGSGGSRNSSSLDHP 142
Query: 301 TRMKIALGS--------ARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKH 352
+ +G ++G+ YL E ++HRD+ + NIL+ + + K++DFGL++
Sbjct: 143 DERALTMGDLISFAWQISQGMQYLAE---MSLVHRDLAARNILVAEGRKMKISDFGLSRD 199
Query: 353 SLDTDTHV 360
+ D+ V
Sbjct: 200 VYEEDSXV 207
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 81/165 (49%), Gaps = 23/165 (13%)
Query: 200 ATDNFSEANLLGQGGFGYVHKGVLTNGK-VVAIKQL------KAGSGQGEREFQAEIEII 252
A ++F LG+G FG V+ K ++A+K L KAG E + + E+EI
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV---EHQLRREVEIQ 62
Query: 253 SQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHG----KDRPVMNWPTRMKIALG 308
S + H +++ L GY ++ L+ E+ P T+ L ++ + T +
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL----- 117
Query: 309 SARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHS 353
A L+Y H ++IHRDIK N+LL + E K+ADFG + H+
Sbjct: 118 -ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHA 158
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 81/165 (49%), Gaps = 23/165 (13%)
Query: 200 ATDNFSEANLLGQGGFGYVHKGVLTNGK-VVAIKQL------KAGSGQGEREFQAEIEII 252
A ++F LG+G FG V+ K ++A+K L KAG E + + E+EI
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV---EHQLRREVEIQ 66
Query: 253 SQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHG----KDRPVMNWPTRMKIALG 308
S + H +++ L GY ++ L+ E+ P T+ L ++ + T +
Sbjct: 67 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL----- 121
Query: 309 SARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHS 353
A L+Y H ++IHRDIK N+LL + E K+ADFG + H+
Sbjct: 122 -ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHA 162
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 81/165 (49%), Gaps = 23/165 (13%)
Query: 200 ATDNFSEANLLGQGGFGYVHKGVLTNGK-VVAIKQL------KAGSGQGEREFQAEIEII 252
A ++F LG+G FG V+ K ++A+K L KAG E + + E+EI
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV---EHQLRREVEIQ 62
Query: 253 SQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHG----KDRPVMNWPTRMKIALG 308
S + H +++ L GY ++ L+ E+ P T+ L ++ + T +
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL----- 117
Query: 309 SARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHS 353
A L+Y H ++IHRDIK N+LL + E K+ADFG + H+
Sbjct: 118 -ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHA 158
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 89/179 (49%), Gaps = 12/179 (6%)
Query: 180 SPGMPVGN----FKSTFTYEEL--KIATDNFSEA-NLLGQGGFGYVHKGVLTNGKVVAIK 232
S G+ +G F+S YE + + ++F E LG G FG V+K V+A
Sbjct: 8 SSGVDLGTENLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAA 67
Query: 233 QLKAGSGQGERE-FQAEIEIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHG 291
++ + E E + EI+I++ H ++V L+ + + ++ EF ++ +
Sbjct: 68 KVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE 127
Query: 292 KDRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
+RP+ ++ + + L YLH++ KIIHRD+K+ NIL + K+ADFG++
Sbjct: 128 LERPLTESQIQV-VCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVS 182
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 89/179 (49%), Gaps = 12/179 (6%)
Query: 180 SPGMPVGN----FKSTFTYEEL--KIATDNFSEA-NLLGQGGFGYVHKGVLTNGKVVAIK 232
S G+ +G F+S YE + + ++F E LG G FG V+K V+A
Sbjct: 8 SSGVDLGTENLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAA 67
Query: 233 QLKAGSGQGERE-FQAEIEIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHG 291
++ + E E + EI+I++ H ++V L+ + + ++ EF ++ +
Sbjct: 68 KVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE 127
Query: 292 KDRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
+RP+ ++ + + L YLH++ KIIHRD+K+ NIL + K+ADFG++
Sbjct: 128 LERPLTESQIQV-VCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVS 182
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 89/179 (49%), Gaps = 12/179 (6%)
Query: 180 SPGMPVGN----FKSTFTYEEL--KIATDNFSEA-NLLGQGGFGYVHKGVLTNGKVVAIK 232
S G+ +G F+S YE + + ++F E LG G FG V+K V+A
Sbjct: 8 SSGVDLGTENLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAA 67
Query: 233 QLKAGSGQGERE-FQAEIEIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHG 291
++ + E E + EI+I++ H ++V L+ + + ++ EF ++ +
Sbjct: 68 KVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE 127
Query: 292 KDRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
+RP+ ++ + + L YLH++ KIIHRD+K+ NIL + K+ADFG++
Sbjct: 128 LERPLTESQIQV-VCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVS 182
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 81/165 (49%), Gaps = 23/165 (13%)
Query: 200 ATDNFSEANLLGQGGFGYVHKGVLTNGK-VVAIKQL------KAGSGQGEREFQAEIEII 252
A ++F LG+G FG V+ K ++A+K L KAG E + + E+EI
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV---EHQLRREVEIQ 62
Query: 253 SQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHG----KDRPVMNWPTRMKIALG 308
S + H +++ L GY ++ L+ E+ P T+ L ++ + T +
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL----- 117
Query: 309 SARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHS 353
A L+Y H ++IHRDIK N+LL + E K+ADFG + H+
Sbjct: 118 -ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHA 158
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 79/161 (49%), Gaps = 22/161 (13%)
Query: 210 LGQGGFGYVHK----GV--LTNGKVVAIKQLKAGSGQGE-REFQAEIEIISQV-HHRHLV 261
LG+G FG V + G+ + VA+K LK G+ E R +E++I+ + HH ++V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 262 SLVGYCTF-GSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK----------IALGSA 310
+L+G CT G +++ EF L +L K + + K + A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 311 RGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+G+ +L K IHRD+ + NILL + K+ DFGLA+
Sbjct: 155 KGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLAR 192
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 81/165 (49%), Gaps = 23/165 (13%)
Query: 200 ATDNFSEANLLGQGGFGYVHKGVLTNGK-VVAIKQL------KAGSGQGEREFQAEIEII 252
A ++F LG+G FG V+ K ++A+K L KAG E + + E+EI
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV---EHQLRREVEIQ 65
Query: 253 SQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHG----KDRPVMNWPTRMKIALG 308
S + H +++ L GY ++ L+ E+ P T+ L ++ + T +
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL----- 120
Query: 309 SARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHS 353
A L+Y H ++IHRDIK N+LL + E K+ADFG + H+
Sbjct: 121 -ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHA 161
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 86/181 (47%), Gaps = 11/181 (6%)
Query: 180 SPGMPVGNFKSTFTYEELKIATDNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGS 238
S G G +S F + +++ +L +GGF +V++ + +G+ A+K+L +
Sbjct: 6 SLGGASGRDQSDFVGQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNE 65
Query: 239 GQGEREFQAEIEIISQVH-HRHLVSLVGYCTFGSQR--------LLVYEFVPNKTLEFHL 289
+ R E+ + ++ H ++V + G + LL+ E + +EF
Sbjct: 66 EEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLK 125
Query: 290 HGKDRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGL 349
+ R ++ T +KI + R + ++H +P IIHRD+K N+LL + K+ DFG
Sbjct: 126 KMESRGPLSCDTVLKIFYQTCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGS 184
Query: 350 A 350
A
Sbjct: 185 A 185
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 81/165 (49%), Gaps = 23/165 (13%)
Query: 200 ATDNFSEANLLGQGGFGYVHKGVLTNGK-VVAIKQL------KAGSGQGEREFQAEIEII 252
A ++F LG+G FG V+ K ++A+K L KAG E + + E+EI
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV---EHQLRREVEIQ 62
Query: 253 SQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHG----KDRPVMNWPTRMKIALG 308
S + H +++ L GY ++ L+ E+ P T+ L ++ + T +
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL----- 117
Query: 309 SARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHS 353
A L+Y H ++IHRDIK N+LL + E K+ADFG + H+
Sbjct: 118 -ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHA 158
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 81/165 (49%), Gaps = 23/165 (13%)
Query: 200 ATDNFSEANLLGQGGFGYVHKGVLTNGK-VVAIKQL------KAGSGQGEREFQAEIEII 252
A ++F LG+G FG V+ K ++A+K L KAG E + + E+EI
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV---EHQLRREVEIQ 65
Query: 253 SQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHG----KDRPVMNWPTRMKIALG 308
S + H +++ L GY ++ L+ E+ P T+ L ++ + T +
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL----- 120
Query: 309 SARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHS 353
A L+Y H ++IHRDIK N+LL + E K+ADFG + H+
Sbjct: 121 -ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHA 161
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 74/162 (45%), Gaps = 13/162 (8%)
Query: 198 KIATDNFSEANLLGQGGFGYVHKGVLTNGK-VVAIKQLKAGSGQGE---REFQAEIEIIS 253
K D+F LG+G FG V+ K ++A+K L + E + + EIEI S
Sbjct: 10 KFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQS 69
Query: 254 QVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTL--EFHLHGKDRPVMNWPTRMKIALGSAR 311
+ H +++ + Y + L+ EF P L E HG+ + A
Sbjct: 70 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR----FDEQRSATFMEELAD 125
Query: 312 GLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHS 353
L Y HE K+IHRDIK N+L+ E K+ADFG + H+
Sbjct: 126 ALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHA 164
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 79/168 (47%), Gaps = 32/168 (19%)
Query: 202 DNFSEANLLGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEI--ISQVHHRH 259
DN L+G+G +G V+KG L + + VA+K + Q F E I + + H +
Sbjct: 13 DNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQN---FINEKNIYRVPLMEHDN 68
Query: 260 LVSLVGYCTFGSQR---------LLVYEFVPNKTLE--FHLHGKDRPVMNWPTRMKIALG 308
+ + G +R LLV E+ PN +L LH D W + ++A
Sbjct: 69 IARFI----VGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSD-----WVSSCRLAHS 119
Query: 309 SARGLAYLHEDC------QPKIIHRDIKSANILLDDSFEAKVADFGLA 350
RGLAYLH + +P I HRD+ S N+L+ + ++DFGL+
Sbjct: 120 VTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLS 167
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 74/162 (45%), Gaps = 13/162 (8%)
Query: 198 KIATDNFSEANLLGQGGFGYVHKGVLTNGK-VVAIKQLKAGSGQGE---REFQAEIEIIS 253
K D+F LG+G FG V+ K ++A+K L + E + + EIEI S
Sbjct: 11 KFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQS 70
Query: 254 QVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTL--EFHLHGKDRPVMNWPTRMKIALGSAR 311
+ H +++ + Y + L+ EF P L E HG+ + A
Sbjct: 71 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR----FDEQRSATFMEELAD 126
Query: 312 GLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHS 353
L Y HE K+IHRDIK N+L+ E K+ADFG + H+
Sbjct: 127 ALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHA 165
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 81/165 (49%), Gaps = 23/165 (13%)
Query: 200 ATDNFSEANLLGQGGFGYVHKGVLTNGK-VVAIKQL------KAGSGQGEREFQAEIEII 252
A ++F LG+G FG V+ K ++A+K L KAG E + + E+EI
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV---EHQLRREVEIQ 67
Query: 253 SQVHHRHLVSLVGYCTFGSQRLLVYEFVPN----KTLEFHLHGKDRPVMNWPTRMKIALG 308
S + H +++ L GY ++ L+ E+ P K L+ ++ + T +
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITEL----- 122
Query: 309 SARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHS 353
A L+Y H ++IHRDIK N+LL + E K+ADFG + H+
Sbjct: 123 -ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHA 163
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 81/165 (49%), Gaps = 23/165 (13%)
Query: 200 ATDNFSEANLLGQGGFGYVHKGVLTNGK-VVAIKQL------KAGSGQGEREFQAEIEII 252
A ++F LG+G FG V+ K ++A+K L KAG E + + E+EI
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV---EHQLRREVEIQ 67
Query: 253 SQVHHRHLVSLVGYCTFGSQRLLVYEFVPN----KTLEFHLHGKDRPVMNWPTRMKIALG 308
S + H +++ L GY ++ L+ E+ P K L+ ++ + T +
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITEL----- 122
Query: 309 SARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHS 353
A L+Y H ++IHRDIK N+LL + E K+ADFG + H+
Sbjct: 123 -ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHA 163
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 74/162 (45%), Gaps = 13/162 (8%)
Query: 198 KIATDNFSEANLLGQGGFGYVHKGVLTNGK-VVAIKQLKAGSGQGE---REFQAEIEIIS 253
K D+F LG+G FG V+ K ++A+K L + E + + EIEI S
Sbjct: 10 KFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQS 69
Query: 254 QVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTL--EFHLHGKDRPVMNWPTRMKIALGSAR 311
+ H +++ + Y + L+ EF P L E HG+ + A
Sbjct: 70 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR----FDEQRSATFMEELAD 125
Query: 312 GLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHS 353
L Y HE K+IHRDIK N+L+ E K+ADFG + H+
Sbjct: 126 ALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHA 164
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 79/161 (49%), Gaps = 22/161 (13%)
Query: 210 LGQGGFGYVHK----GV--LTNGKVVAIKQLKAGSGQGE-REFQAEIEIISQV-HHRHLV 261
LG+G FG V + G+ + VA+K LK G+ E R +E++I+ + HH ++V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 262 SLVGYCTF-GSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK----------IALGSA 310
+L+G CT G +++ EF L +L K + + K + A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 311 RGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+G+ +L K IHRD+ + NILL + K+ DFGLA+
Sbjct: 155 KGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLAR 192
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 83/166 (50%), Gaps = 22/166 (13%)
Query: 203 NFSEANLLGQGGFGYVHKGVLT----NGKV-VAIKQLKAGSG-QGEREFQAEIEIISQVH 256
+ +LG G FG V+KG+ N K+ VAIK L+ + + +E E +++ V
Sbjct: 18 ELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVG 77
Query: 257 HRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGK-----DRPVMNWPTRMKIALGSAR 311
++ L+G C S LV + +P L H+ + ++NW ++ A+
Sbjct: 78 SPYVSRLLGIC-LTSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQI------AK 130
Query: 312 GLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTD 357
G++YL + +++HRD+ + N+L+ K+ DFGLA+ LD D
Sbjct: 131 GMSYLED---VRLVHRDLAARNVLVKSPNHVKITDFGLARL-LDID 172
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 108/279 (38%), Gaps = 58/279 (20%)
Query: 117 FAGKPHHWQQNVSAPSDYQELPKPSLPP----SNGPTAPLPTVPVSA------------- 159
F G P WQ S + PKP + P S P AP V S
Sbjct: 29 FTGLPRQWQ---SLIEESARRPKPLVDPACITSIQPGAPKTIVRGSKGAKDGALTLLLDE 85
Query: 160 -FNEPLSTSGSLDSDKPFP----RQSPGMPVG--------NFKSTFTYEELKIAT----- 201
N ++ S SL D P P RQ GMP ++E+ + A
Sbjct: 86 FENMSVTRSNSLRRDSPPPPARARQENGMPEKPPGPRSPQREPQRVSHEQFRAALQLVVD 145
Query: 202 --------DNFSEANLLGQGGFGYVHKG-VLTNGKVVAIKQLKAGSGQGEREFQAEIEII 252
DNF + +G+G G V V ++GK+VA+K++ Q E+ I+
Sbjct: 146 PGDPRSYLDNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIM 202
Query: 253 SQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTL-EFHLHGKDRPVMNWPTRMKIALGSAR 311
H ++V + G + +V EF+ L + H + MN + L +
Sbjct: 203 RDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQ 258
Query: 312 GLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
L+ LH +IHRDIKS +ILL K++DFG
Sbjct: 259 ALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFC 294
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 15/159 (9%)
Query: 202 DNFSEANLLGQGGFGYVHKGVLTNGK-VVAIKQL------KAGSGQGEREFQAEIEIISQ 254
++F LG+G FG V+ K ++A+K L KAG E + + E+EI S
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGV---EHQLRREVEIQSH 68
Query: 255 VHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLA 314
+ H +++ L GY ++ L+ E+ P T+ L R L +A L+
Sbjct: 69 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANA--LS 126
Query: 315 YLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHS 353
Y H ++IHRDIK N+LL + E K+ADFG + H+
Sbjct: 127 YCH---SKRVIHRDIKPENLLLGSNGELKIADFGWSVHA 162
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 92/206 (44%), Gaps = 34/206 (16%)
Query: 170 LDSDK-PFPRQSPGMPVGNFKSTFTYEELKIATDNFSEANLLGQGGFGYVHK----GV-- 222
+D D+ P +P K F + LK+ LG+G FG V + G+
Sbjct: 1 MDPDELPLDEHCERLPYDASKWEFPRDRLKLGKP-------LGRGAFGQVIEADAFGIDK 53
Query: 223 LTNGKVVAIKQLKAGSGQGE-REFQAEIEIISQV-HHRHLVSLVGYCTF-GSQRLLVYEF 279
+ VA+K LK G+ E R +E++I+ + HH ++V+L+G CT G +++ EF
Sbjct: 54 TATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEF 113
Query: 280 VPNKTLEFHLHGKD--------------RPVMNWPTRMKIALGSARGLAYLHEDCQPKII 325
L +L K + + + + A+G+ +L K I
Sbjct: 114 CKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCI 170
Query: 326 HRDIKSANILLDDSFEAKVADFGLAK 351
HRD+ + NILL + K+ DFGLA+
Sbjct: 171 HRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 15/159 (9%)
Query: 202 DNFSEANLLGQGGFGYVHKGVLTNGK-VVAIKQL------KAGSGQGEREFQAEIEIISQ 254
++F LG+G FG V+ K ++A+K L KAG E + + E+EI S
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGV---EHQLRREVEIQSH 68
Query: 255 VHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLA 314
+ H +++ L GY ++ L+ E+ P T+ L R L +A L+
Sbjct: 69 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANA--LS 126
Query: 315 YLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHS 353
Y H ++IHRDIK N+LL + E K+ADFG + H+
Sbjct: 127 YCH---SKRVIHRDIKPENLLLGSNGELKIADFGWSVHA 162
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 83/171 (48%), Gaps = 22/171 (12%)
Query: 203 NFSEANLLGQGGFGYVHKGVLTN-GKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLV 261
++++ ++G G FG V++ L + G++VAIK++ G RE Q I+ ++ H ++V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQ----IMRKLDHCNIV 76
Query: 262 SLVGYCTFGSQRL------LVYEFVPNKTLEFHLH----GKDRPVMNWPTRMKIALGSAR 311
L + ++ LV ++VP H + PV+ M R
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF---R 133
Query: 312 GLAYLHEDCQPKIIHRDIKSANILLD-DSFEAKVADFGLAKHSLDTDTHVS 361
LAY+H I HRDIK N+LLD D+ K+ DFG AK + + +VS
Sbjct: 134 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 92/206 (44%), Gaps = 34/206 (16%)
Query: 170 LDSDK-PFPRQSPGMPVGNFKSTFTYEELKIATDNFSEANLLGQGGFGYVHK----GV-- 222
+D D+ P +P K F + LK+ LG+G FG V + G+
Sbjct: 1 MDPDELPLDEHCERLPYDASKWEFPRDRLKLGKP-------LGRGAFGQVIEADAFGIDK 53
Query: 223 LTNGKVVAIKQLKAGSGQGE-REFQAEIEIISQV-HHRHLVSLVGYCTF-GSQRLLVYEF 279
+ VA+K LK G+ E R +E++I+ + HH ++V+L+G CT G +++ EF
Sbjct: 54 TATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEF 113
Query: 280 VPNKTLEFHLHGKD--------------RPVMNWPTRMKIALGSARGLAYLHEDCQPKII 325
L +L K + + + + A+G+ +L K I
Sbjct: 114 CKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCI 170
Query: 326 HRDIKSANILLDDSFEAKVADFGLAK 351
HRD+ + NILL + K+ DFGLA+
Sbjct: 171 HRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 83/171 (48%), Gaps = 22/171 (12%)
Query: 203 NFSEANLLGQGGFGYVHKGVLTN-GKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLV 261
++++ ++G G FG V++ L + G++VAIK++ G RE Q I+ ++ H ++V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQ----IMRKLDHCNIV 76
Query: 262 SLVGYCTFGSQRL------LVYEFVPNKTLEFHLH----GKDRPVMNWPTRMKIALGSAR 311
L + ++ LV ++VP H + PV+ M R
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF---R 133
Query: 312 GLAYLHEDCQPKIIHRDIKSANILLD-DSFEAKVADFGLAKHSLDTDTHVS 361
LAY+H I HRDIK N+LLD D+ K+ DFG AK + + +VS
Sbjct: 134 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 92/206 (44%), Gaps = 34/206 (16%)
Query: 170 LDSDK-PFPRQSPGMPVGNFKSTFTYEELKIATDNFSEANLLGQGGFGYVHK----GV-- 222
+D D+ P +P K F + LK+ LG+G FG V + G+
Sbjct: 1 MDPDELPLDEHCERLPYDASKWEFPRDRLKLGKP-------LGRGAFGQVIEADAFGIDK 53
Query: 223 LTNGKVVAIKQLKAGSGQGE-REFQAEIEIISQV-HHRHLVSLVGYCTF-GSQRLLVYEF 279
+ VA+K LK G+ E R +E++I+ + HH ++V+L+G CT G +++ EF
Sbjct: 54 TATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEF 113
Query: 280 VPNKTLEFHLHGKD--------------RPVMNWPTRMKIALGSARGLAYLHEDCQPKII 325
L +L K + + + + A+G+ +L K I
Sbjct: 114 CKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCI 170
Query: 326 HRDIKSANILLDDSFEAKVADFGLAK 351
HRD+ + NILL + K+ DFGLA+
Sbjct: 171 HRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 81/165 (49%), Gaps = 23/165 (13%)
Query: 200 ATDNFSEANLLGQGGFGYVHKGVLTNGK-VVAIKQL------KAGSGQGEREFQAEIEII 252
A ++F LG+G FG V+ K ++A+K L KAG E + + E+EI
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGV---EHQLRREVEIQ 59
Query: 253 SQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHG----KDRPVMNWPTRMKIALG 308
S + H +++ L GY ++ L+ E+ P T+ L ++ + T +
Sbjct: 60 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL----- 114
Query: 309 SARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHS 353
A L+Y H ++IHRDIK N+LL + E K+ADFG + H+
Sbjct: 115 -ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHA 155
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 81/161 (50%), Gaps = 13/161 (8%)
Query: 198 KIATDNFSEANLLGQGGFGYVHKGVLTN-GKV---VAIKQLKAGSGQGER-EFQAEIEII 252
+I + ++G G FG V G L GK VAIK LK G + +R +F E I+
Sbjct: 18 EIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIM 77
Query: 253 SQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDR--PVMNWPTRMKIALGSA 310
Q H +++ L G T ++V E++ N +L+ L D V+ ++ G +
Sbjct: 78 GQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLR---GIS 134
Query: 311 RGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
G+ YL + +HRD+ + NIL++ + KV+DFGL++
Sbjct: 135 AGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSR 172
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 80/166 (48%), Gaps = 26/166 (15%)
Query: 203 NFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLV 261
+F E L+G GGFG V K +GK IK++K + + ERE +A ++++ H ++V
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKA----LAKLDHVNIV 67
Query: 262 SLVGYCTFG-----------SQR------LLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK 304
G C G S R + EF TLE + + ++ ++
Sbjct: 68 HYNG-CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALE 126
Query: 305 IALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
+ +G+ Y+H K+I+RD+K +NI L D+ + K+ DFGL
Sbjct: 127 LFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLV 169
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 92/206 (44%), Gaps = 34/206 (16%)
Query: 170 LDSDK-PFPRQSPGMPVGNFKSTFTYEELKIATDNFSEANLLGQGGFGYVHK----GV-- 222
+D D+ P +P K F + LK+ LG+G FG V + G+
Sbjct: 38 MDPDELPLDEHCERLPYDASKWEFPRDRLKLGKP-------LGRGAFGQVIEADAFGIDK 90
Query: 223 LTNGKVVAIKQLKAGSGQGE-REFQAEIEIISQV-HHRHLVSLVGYCTF-GSQRLLVYEF 279
+ VA+K LK G+ E R +E++I+ + HH ++V+L+G CT G +++ EF
Sbjct: 91 TATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEF 150
Query: 280 VPNKTLEFHLHGKD--------------RPVMNWPTRMKIALGSARGLAYLHEDCQPKII 325
L +L K + + + + A+G+ +L K I
Sbjct: 151 CKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCI 207
Query: 326 HRDIKSANILLDDSFEAKVADFGLAK 351
HRD+ + NILL + K+ DFGLA+
Sbjct: 208 HRDLAARNILLSEKNVVKICDFGLAR 233
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 85/189 (44%), Gaps = 34/189 (17%)
Query: 202 DNFSEANLLGQGGFGYVHK----GVLTNGKV--VAIKQLKAGSGQGERE-FQAEIEIISQ 254
+N +LG G FG V G+ G VA+K LK + ERE +E+++++Q
Sbjct: 45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 104
Query: 255 V-HHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGK--------------------- 292
+ H ++V+L+G CT L++E+ L +L K
Sbjct: 105 LGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEE 164
Query: 293 DRPVMNWPTRMKIALGSARGLAYLH-EDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
D V+ + + A A+G+ +L + C +HRD+ + N+L+ K+ DFGLA+
Sbjct: 165 DLNVLTFEDLLCFAYQVAKGMEFLEFKSC----VHRDLAARNVLVTHGKVVKICDFGLAR 220
Query: 352 HSLDTDTHV 360
+ +V
Sbjct: 221 DIMSDSNYV 229
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 83/171 (48%), Gaps = 22/171 (12%)
Query: 203 NFSEANLLGQGGFGYVHKGVLTN-GKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLV 261
++++ ++G G FG V++ L + G++VAIK++ G RE Q I+ ++ H ++V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQ----IMRKLDHCNIV 76
Query: 262 SLVGYCTFGSQRL------LVYEFVPNKTLEFHLH----GKDRPVMNWPTRMKIALGSAR 311
L + ++ LV ++VP H + PV+ M R
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLF---R 133
Query: 312 GLAYLHEDCQPKIIHRDIKSANILLD-DSFEAKVADFGLAKHSLDTDTHVS 361
LAY+H I HRDIK N+LLD D+ K+ DFG AK + + +VS
Sbjct: 134 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 84/162 (51%), Gaps = 21/162 (12%)
Query: 210 LGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLVGYCTF 269
+G+G FG V +G G+ VA+K S + ER + E EI V RH +++G+
Sbjct: 50 IGKGRFGEVWRGKW-RGEEVAVKIF---SSREERSWFREAEIYQTVMLRH-ENILGFIAA 104
Query: 270 G-------SQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDC-- 320
+Q LV ++ + +L +L +R + +K+AL +A GLA+LH +
Sbjct: 105 DNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEIVG 161
Query: 321 ---QPKIIHRDIKSANILLDDSFEAKVADFGLA-KHSLDTDT 358
+P I HRD+KS NIL+ + +AD GLA +H TDT
Sbjct: 162 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDT 203
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 80/163 (49%), Gaps = 8/163 (4%)
Query: 204 FSEANLLGQGGFGYVHKGVLT-NGKVVAIKQLK-AGSGQGEREFQAEIEIISQVHHRHLV 261
F++ +G+G FG V KG+ KVVAIK + + + Q EI ++SQ ++
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 262 SLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQ 321
G ++ ++ E++ + L T ++ L +GL YLH +
Sbjct: 89 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREIL---KGLDYLHSE-- 143
Query: 322 PKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTHVSTRV 364
K IHRDIK+AN+LL + E K+ADFG+A DT +T V
Sbjct: 144 -KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV 185
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 81/165 (49%), Gaps = 23/165 (13%)
Query: 200 ATDNFSEANLLGQGGFGYVHKGVLTNGK-VVAIKQL------KAGSGQGEREFQAEIEII 252
A ++F LG+G FG V+ K ++A+K L KAG E + + E+EI
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV---EHQLRREVEIQ 64
Query: 253 SQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHG----KDRPVMNWPTRMKIALG 308
S + H +++ L GY ++ L+ E+ P T+ L ++ + T +
Sbjct: 65 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL----- 119
Query: 309 SARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHS 353
A L+Y H ++IHRDIK N+LL + E K+A+FG + H+
Sbjct: 120 -ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSVHA 160
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 84/162 (51%), Gaps = 21/162 (12%)
Query: 210 LGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLVGYCTF 269
+G+G FG V +G G+ VA+K S + ER + E EI V RH +++G+
Sbjct: 37 IGKGRFGEVWRGKW-RGEEVAVKIF---SSREERSWFREAEIYQTVMLRH-ENILGFIAA 91
Query: 270 G-------SQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDC-- 320
+Q LV ++ + +L +L +R + +K+AL +A GLA+LH +
Sbjct: 92 DNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEIVG 148
Query: 321 ---QPKIIHRDIKSANILLDDSFEAKVADFGLA-KHSLDTDT 358
+P I HRD+KS NIL+ + +AD GLA +H TDT
Sbjct: 149 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDT 190
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 80/163 (49%), Gaps = 8/163 (4%)
Query: 204 FSEANLLGQGGFGYVHKGVLT-NGKVVAIKQLK-AGSGQGEREFQAEIEIISQVHHRHLV 261
F++ +G+G FG V KG+ KVVAIK + + + Q EI ++SQ ++
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 262 SLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQ 321
G ++ ++ E++ + L T ++ L +GL YLH +
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREIL---KGLDYLHSE-- 123
Query: 322 PKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTHVSTRV 364
K IHRDIK+AN+LL + E K+ADFG+A DT +T V
Sbjct: 124 -KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV 165
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 26/165 (15%)
Query: 210 LGQGGFGYVHK----GV--LTNGKVVAIKQLKAGSGQGE-REFQAEIEIISQV-HHRHLV 261
LG+G FG V + G+ + VA+K LK G+ E R +E++I+ + HH ++V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 262 SLVGYCTF-GSQRLLVYEFVPNKTLEFHLHGKD--------------RPVMNWPTRMKIA 306
+L+G CT G +++ EF L +L K + + + +
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 307 LGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
A+G+ +L K IHRD+ + NILL + K+ DFGLA+
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 73/156 (46%), Gaps = 14/156 (8%)
Query: 202 DNFSEANLLGQGGFGYVHKG-VLTNGKVVAIKQL------KAGSGQGEREFQAEIEIISQ 254
++F NLLG+G F V++ + G VAIK + KAG Q Q E++I Q
Sbjct: 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQ---RVQNEVKIHCQ 67
Query: 255 VHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLA 314
+ H ++ L Y + LV E N + +L + +P R G+
Sbjct: 68 LKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEAR-HFMHQIITGML 126
Query: 315 YLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
YLH I+HRD+ +N+LL + K+ADFGLA
Sbjct: 127 YLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLA 159
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 81/165 (49%), Gaps = 23/165 (13%)
Query: 200 ATDNFSEANLLGQGGFGYVHKGVLTNGK-VVAIKQL------KAGSGQGEREFQAEIEII 252
A ++F LG+G FG V+ K ++A+K L KAG E + + E+EI
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV---EHQLRREVEIQ 65
Query: 253 SQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHG----KDRPVMNWPTRMKIALG 308
S + H +++ L GY ++ L+ E+ P T+ L ++ + T +
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL----- 120
Query: 309 SARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHS 353
A L+Y H ++IHRDIK N+LL + E K+A+FG + H+
Sbjct: 121 -ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSVHA 161
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 84/162 (51%), Gaps = 21/162 (12%)
Query: 210 LGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLVGYCTF 269
+G+G FG V +G G+ VA+K S + ER + E EI V RH +++G+
Sbjct: 12 IGKGRFGEVWRGKW-RGEEVAVKIF---SSREERSWFREAEIYQTVMLRH-ENILGFIAA 66
Query: 270 -------GSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDC-- 320
+Q LV ++ + +L +L +R + +K+AL +A GLA+LH +
Sbjct: 67 DNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEIVG 123
Query: 321 ---QPKIIHRDIKSANILLDDSFEAKVADFGLA-KHSLDTDT 358
+P I HRD+KS NIL+ + +AD GLA +H TDT
Sbjct: 124 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDT 165
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 84/162 (51%), Gaps = 21/162 (12%)
Query: 210 LGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLVGYCTF 269
+G+G FG V +G G+ VA+K S + ER + E EI V RH +++G+
Sbjct: 14 IGKGRFGEVWRGKW-RGEEVAVKIF---SSREERSWFREAEIYQTVMLRH-ENILGFIAA 68
Query: 270 -------GSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDC-- 320
+Q LV ++ + +L +L +R + +K+AL +A GLA+LH +
Sbjct: 69 DNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEIVG 125
Query: 321 ---QPKIIHRDIKSANILLDDSFEAKVADFGLA-KHSLDTDT 358
+P I HRD+KS NIL+ + +AD GLA +H TDT
Sbjct: 126 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDT 167
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 84/162 (51%), Gaps = 21/162 (12%)
Query: 210 LGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLVGYCTF 269
+G+G FG V +G G+ VA+K S + ER + E EI V RH +++G+
Sbjct: 17 IGKGRFGEVWRGKW-RGEEVAVKIF---SSREERSWFREAEIYQTVMLRH-ENILGFIAA 71
Query: 270 -------GSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDC-- 320
+Q LV ++ + +L +L +R + +K+AL +A GLA+LH +
Sbjct: 72 DNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEIVG 128
Query: 321 ---QPKIIHRDIKSANILLDDSFEAKVADFGLA-KHSLDTDT 358
+P I HRD+KS NIL+ + +AD GLA +H TDT
Sbjct: 129 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDT 170
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 84/162 (51%), Gaps = 21/162 (12%)
Query: 210 LGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLVGYCTF 269
+G+G FG V +G G+ VA+K S + ER + E EI V RH +++G+
Sbjct: 11 IGKGRFGEVWRGKW-RGEEVAVKIF---SSREERSWFREAEIYQTVMLRH-ENILGFIAA 65
Query: 270 -------GSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDC-- 320
+Q LV ++ + +L +L +R + +K+AL +A GLA+LH +
Sbjct: 66 DNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEIVG 122
Query: 321 ---QPKIIHRDIKSANILLDDSFEAKVADFGLA-KHSLDTDT 358
+P I HRD+KS NIL+ + +AD GLA +H TDT
Sbjct: 123 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDT 164
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 29/184 (15%)
Query: 202 DNFSEANLLGQGGFGYVHK----GVLTN--GKVVAIKQLKAGSGQGERE-FQAEIEIISQ 254
+ S LG G FG V + G++ + VA+K LK + ERE +E++++S
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 255 V-HHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKI-------- 305
+ +H ++V+L+G CT G L++ E+ L L K + T I
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 165
Query: 306 --------ALGSARGLAYL-HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDT 356
+ A+G+A+L ++C IHRD+ + NILL K+ DFGLA+H +
Sbjct: 166 DLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARHIKND 221
Query: 357 DTHV 360
+V
Sbjct: 222 SNYV 225
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 26/165 (15%)
Query: 210 LGQGGFGYVHK----GV--LTNGKVVAIKQLKAGSGQGE-REFQAEIEIISQV-HHRHLV 261
LG+G FG V + G+ + VA+K LK G+ E R +E++I+ + HH ++V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 262 SLVGYCTF-GSQRLLVYEFVPNKTLEFHLHGKD--------------RPVMNWPTRMKIA 306
+L+G CT G +++ EF L +L K + + + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 307 LGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
A+G+ +L K IHRD+ + NILL + K+ DFGLA+
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 26/165 (15%)
Query: 210 LGQGGFGYVHK----GV--LTNGKVVAIKQLKAGSGQGE-REFQAEIEIISQV-HHRHLV 261
LG+G FG V + G+ + VA+K LK G+ E R +E++I+ + HH ++V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 262 SLVGYCTF-GSQRLLVYEFVPNKTLEFHLHGKD--------------RPVMNWPTRMKIA 306
+L+G CT G +++ EF L +L K + + + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 307 LGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
A+G+ +L K IHRD+ + NILL + K+ DFGLA+
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 26/165 (15%)
Query: 210 LGQGGFGYVHK----GV--LTNGKVVAIKQLKAGSGQGE-REFQAEIEIISQV-HHRHLV 261
LG+G FG V + G+ + VA+K LK G+ E R +E++I+ + HH ++V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 262 SLVGYCTF-GSQRLLVYEFVPNKTLEFHLHGKD--------------RPVMNWPTRMKIA 306
+L+G CT G +++ EF L +L K + + + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 307 LGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
A+G+ +L K IHRD+ + NILL + K+ DFGLA+
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 88/171 (51%), Gaps = 22/171 (12%)
Query: 203 NFSEANLLGQGGFGYVHKGVLTN-GKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLV 261
++++ ++G G FG V++ L + G++VAIK++ Q +R E++I+ ++ H ++V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 76
Query: 262 SL-VGYCTFGSQRLLVY-----EFVPNKTLEFHLH----GKDRPVMNWPTRMKIALGSAR 311
L + + G ++ +VY ++VP H + PV+ M R
Sbjct: 77 RLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF---R 133
Query: 312 GLAYLHEDCQPKIIHRDIKSANILLD-DSFEAKVADFGLAKHSLDTDTHVS 361
LAY+H I HRDIK N+LLD D+ K+ DFG AK + + +VS
Sbjct: 134 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 77/155 (49%), Gaps = 8/155 (5%)
Query: 204 FSEANLLGQGGFGYVHKGVLT-NGKVVAIKQLK-AGSGQGEREFQAEIEIISQVHHRHLV 261
F++ +G+G FG V KG+ KVVAIK + + + Q EI ++SQ ++
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 262 SLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQ 321
G ++ ++ E++ + L T ++ L +GL YLH +
Sbjct: 84 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREIL---KGLDYLHSE-- 138
Query: 322 PKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDT 356
K IHRDIK+AN+LL + E K+ADFG+A DT
Sbjct: 139 -KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT 172
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 22/171 (12%)
Query: 203 NFSEANLLGQGGFGYVHKGVLTN-GKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLV 261
++++ ++G G FG V++ L + G++VAIK++ Q +R E++I+ ++ H ++V
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 114
Query: 262 SLVGYCTFGSQRL------LVYEFVPNKTLEFHLH----GKDRPVMNWPTRMKIALGSAR 311
L + ++ LV ++VP H + PV+ M R
Sbjct: 115 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF---R 171
Query: 312 GLAYLHEDCQPKIIHRDIKSANILLD-DSFEAKVADFGLAKHSLDTDTHVS 361
LAY+H I HRDIK N+LLD D+ K+ DFG AK + + +VS
Sbjct: 172 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 219
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 22/171 (12%)
Query: 203 NFSEANLLGQGGFGYVHKGVLTN-GKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLV 261
++++ ++G G FG V++ L + G++VAIK++ Q +R E++I+ ++ H ++V
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 112
Query: 262 SLVGYCTFGSQRL------LVYEFVPNKTLEFHLH----GKDRPVMNWPTRMKIALGSAR 311
L + ++ LV ++VP H + PV+ M R
Sbjct: 113 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF---R 169
Query: 312 GLAYLHEDCQPKIIHRDIKSANILLD-DSFEAKVADFGLAKHSLDTDTHVS 361
LAY+H I HRDIK N+LLD D+ K+ DFG AK + + +VS
Sbjct: 170 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 217
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 86/173 (49%), Gaps = 39/173 (22%)
Query: 207 ANLLGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLVGY 266
+G+G +G V +G L +G+ VA+K S + E+ + E EI + V RH +++G+
Sbjct: 13 VECVGKGRYGEVWRG-LWHGESVAVKIF---SSRDEQSWFRETEIYNTVLLRH-DNILGF 67
Query: 267 CTF-------GSQRLLV---------YEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSA 310
+Q L+ Y+F+ +TLE HL +++A+ +A
Sbjct: 68 IASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHL------------ALRLAVSAA 115
Query: 311 RGLAYLHEDC-----QPKIIHRDIKSANILLDDSFEAKVADFGLA-KHSLDTD 357
GLA+LH + +P I HRD KS N+L+ + + +AD GLA HS +D
Sbjct: 116 CGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSD 168
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 80/161 (49%), Gaps = 6/161 (3%)
Query: 209 LLGQ-GGFGYVHKGVLTNGKVVAIKQLKAGSGQGERE-FQAEIEIISQVHHRHLVSLVGY 266
++G+ G FG V+K V+A ++ + E E + EI+I++ H ++V L+
Sbjct: 16 IIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 75
Query: 267 CTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIH 326
+ + ++ EF ++ + +RP+ ++ + + L YLH++ KIIH
Sbjct: 76 FYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQV-VCKQTLDALNYLHDN---KIIH 131
Query: 327 RDIKSANILLDDSFEAKVADFGLAKHSLDTDTHVSTRVMGT 367
RD+K+ NIL + K+ADFG++ + T +GT
Sbjct: 132 RDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGT 172
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 22/171 (12%)
Query: 203 NFSEANLLGQGGFGYVHKGVLTN-GKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLV 261
++++ ++G G FG V++ L + G++VAIK++ Q +R E++I+ ++ H ++V
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 110
Query: 262 SLVGYCTFGSQRL------LVYEFVPNKTLEFHLH----GKDRPVMNWPTRMKIALGSAR 311
L + ++ LV ++VP H + PV+ M R
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF---R 167
Query: 312 GLAYLHEDCQPKIIHRDIKSANILLD-DSFEAKVADFGLAKHSLDTDTHVS 361
LAY+H I HRDIK N+LLD D+ K+ DFG AK + + +VS
Sbjct: 168 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 215
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 22/171 (12%)
Query: 203 NFSEANLLGQGGFGYVHKGVLTN-GKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLV 261
++++ ++G G FG V++ L + G++VAIK++ Q +R E++I+ ++ H ++V
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 155
Query: 262 SLVGYCTFGSQRL------LVYEFVPNKTLEFHLH----GKDRPVMNWPTRMKIALGSAR 311
L + ++ LV ++VP H + PV+ M R
Sbjct: 156 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF---R 212
Query: 312 GLAYLHEDCQPKIIHRDIKSANILLD-DSFEAKVADFGLAKHSLDTDTHVS 361
LAY+H I HRDIK N+LLD D+ K+ DFG AK + + +VS
Sbjct: 213 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 260
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 81/165 (49%), Gaps = 28/165 (16%)
Query: 204 FSEANLLGQGGFGYVHKGVLTNGK-VVAIKQLK-AGSGQGEREFQAEIEIISQVHHRHLV 261
F++ + +G+G FG V+KG+ + K VVAIK + + + Q EI ++SQ ++
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 262 SLVGYCTFGSQRLLVYEFV----------PNKTLEFHLHGKDRPVMNWPTRMKIALGSAR 311
G ++ ++ E++ P E ++ R ++ +
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREIL-------------K 127
Query: 312 GLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDT 356
GL YLH + + IHRDIK+AN+LL + + K+ADFG+A DT
Sbjct: 128 GLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDT 169
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 22/171 (12%)
Query: 203 NFSEANLLGQGGFGYVHKGVLTN-GKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLV 261
++++ ++G G FG V++ L + G++VAIK++ Q +R E++I+ ++ H ++V
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 110
Query: 262 SLVGYCTFGSQRL------LVYEFVPNKTLEFHLH----GKDRPVMNWPTRMKIALGSAR 311
L + ++ LV ++VP H + PV+ M R
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF---R 167
Query: 312 GLAYLHEDCQPKIIHRDIKSANILLD-DSFEAKVADFGLAKHSLDTDTHVS 361
LAY+H I HRDIK N+LLD D+ K+ DFG AK + + +VS
Sbjct: 168 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 215
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 84/175 (48%), Gaps = 9/175 (5%)
Query: 199 IATDNFSEANLLGQGGFGYVHKG-VLTNGKVVAIKQLKAGSGQ---GEREFQAEIEIISQ 254
+ + F + +LG+GGFG V V GK+ A K+L+ + GE E +I+ +
Sbjct: 181 VTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEK 240
Query: 255 VHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLA 314
V+ R +VSL LV + L+FH++ + + A GL
Sbjct: 241 VNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLE 300
Query: 315 YLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTHVSTRVMGTFG 369
LH + +I++RD+K NILLDD +++D GLA H + T + RV GT G
Sbjct: 301 DLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKGRV-GTVG 350
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 84/175 (48%), Gaps = 9/175 (5%)
Query: 199 IATDNFSEANLLGQGGFGYVHKG-VLTNGKVVAIKQLKAGSGQ---GEREFQAEIEIISQ 254
+ + F + +LG+GGFG V V GK+ A K+L+ + GE E +I+ +
Sbjct: 181 VTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEK 240
Query: 255 VHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLA 314
V+ R +VSL LV + L+FH++ + + A GL
Sbjct: 241 VNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLE 300
Query: 315 YLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTHVSTRVMGTFG 369
LH + +I++RD+K NILLDD +++D GLA H + T + RV GT G
Sbjct: 301 DLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKGRV-GTVG 350
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 82/185 (44%), Gaps = 27/185 (14%)
Query: 202 DNFSEANLLGQGGFGYV--------HKGVLTNGKVVAIKQLKAGSGQGE-REFQAEIEII 252
D + LG+G FG V K VA+K LK + + + + +E+E++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 253 SQV-HHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------- 304
+ H+++++L+G CT ++ E+ L +L + P M + +
Sbjct: 95 KMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 305 -------IALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTD 357
ARG+ YL K IHRD+ + N+L+ ++ K+ADFGLA+ + D
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 358 THVST 362
+ T
Sbjct: 212 YYKKT 216
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 81/177 (45%), Gaps = 27/177 (15%)
Query: 210 LGQGGFGYV--------HKGVLTNGKVVAIKQLKAGSGQGE-REFQAEIEIISQV-HHRH 259
LG+G FG V K VA+K LK + + + + +E+E++ + H++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 260 LVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK--------------I 305
+++L+G CT ++ E+ L +L + P M + +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 306 ALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTHVST 362
ARG+ YL K IHRD+ + N+L+ ++ K+ADFGLA+ + D + +T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNT 216
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 99/229 (43%), Gaps = 17/229 (7%)
Query: 143 PPSNGPTAPLPTVPVSAFNEP---LSTSGSLDSDKPFPRQSPGMPVGNFKSTFTYEELKI 199
P G A LP++P A NE S + S+ + ST YE I
Sbjct: 332 PQKEGERA-LPSIPKLANNEKQGVRSHTVSVSETDDYAEIIDEEDTYTMPSTRDYE---I 387
Query: 200 ATDNFSEANLLGQGGFGYVHKGVLTN----GKVVAIKQLKAGSGQGERE-FQAEIEIISQ 254
+ +G+G FG VH+G+ + VAIK K + RE F E + Q
Sbjct: 388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQ 447
Query: 255 VHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLA 314
H H+V L+G T + ++ E L L + + ++ + + A + LA
Sbjct: 448 FDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALA 505
Query: 315 YLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTHVSTR 363
YL + +HRDI + N+L+ + K+ DFGL+++ D+ + +++
Sbjct: 506 YLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 551
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 93/196 (47%), Gaps = 34/196 (17%)
Query: 195 EELKIATDNFSEANLLGQGGFGYVHK----GVLTNGKV--VAIKQLKAGSGQGERE-FQA 247
E+ + +N LG G FG V + G+ V VA+K LK+ + E+E +
Sbjct: 24 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 83
Query: 248 EIEIISQV-HHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMN-------- 298
E++I+S + H ++V+L+G CT G L++ E+ L L K ++
Sbjct: 84 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQD 143
Query: 299 ---------WPTRMKIAL----GSARGLAYL-HEDCQPKIIHRDIKSANILLDDSFEAKV 344
P ++ L A+G+A+L ++C IHRD+ + N+LL + AK+
Sbjct: 144 PEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKI 199
Query: 345 ADFGLAKHSLDTDTHV 360
DFGLA+ ++ ++
Sbjct: 200 GDFGLARDIMNDSNYI 215
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 22/171 (12%)
Query: 203 NFSEANLLGQGGFGYVHKGVLTN-GKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLV 261
++++ ++G G FG V++ L + G++VAIK++ Q +R E++I+ ++ H ++V
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 104
Query: 262 SLVGYCTFGSQRL------LVYEFVPNKTLEFHLH----GKDRPVMNWPTRMKIALGSAR 311
L + ++ LV ++VP H + PV+ M R
Sbjct: 105 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF---R 161
Query: 312 GLAYLHEDCQPKIIHRDIKSANILLD-DSFEAKVADFGLAKHSLDTDTHVS 361
LAY+H I HRDIK N+LLD D+ K+ DFG AK + + +VS
Sbjct: 162 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 209
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 77/155 (49%), Gaps = 8/155 (5%)
Query: 204 FSEANLLGQGGFGYVHKGVLT-NGKVVAIKQLK-AGSGQGEREFQAEIEIISQVHHRHLV 261
F++ +G+G FG V KG+ KVVAIK + + + Q EI ++SQ ++
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 262 SLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQ 321
G ++ ++ E++ + L T ++ L +GL YLH +
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREIL---KGLDYLHSE-- 123
Query: 322 PKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDT 356
K IHRDIK+AN+LL + E K+ADFG+A DT
Sbjct: 124 -KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT 157
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 82/185 (44%), Gaps = 27/185 (14%)
Query: 202 DNFSEANLLGQGGFGYV--------HKGVLTNGKVVAIKQLKAGSGQGE-REFQAEIEII 252
D + LG+G FG V K VA+K LK + + + + +E+E++
Sbjct: 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 140
Query: 253 SQV-HHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------- 304
+ H+++++L+G CT ++ E+ L +L + P M + +
Sbjct: 141 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 200
Query: 305 -------IALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTD 357
ARG+ YL K IHRD+ + N+L+ ++ K+ADFGLA+ + D
Sbjct: 201 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 257
Query: 358 THVST 362
+ T
Sbjct: 258 YYKKT 262
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 87/197 (44%), Gaps = 41/197 (20%)
Query: 203 NFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLV 261
+F E L+G GGFG V K +GK I+++K + + ERE +A ++++ H ++V
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAEREVKA----LAKLDHVNIV 68
Query: 262 SLVGYCTFG------------------------SQR------LLVYEFVPNKTLEFHLHG 291
G C G S R + EF TLE +
Sbjct: 69 HYNG-CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEK 127
Query: 292 KDRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ ++ +++ +G+ Y+H K+IHRD+K +NI L D+ + K+ DFGL
Sbjct: 128 RRGEKLDKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQVKIGDFGLVT 184
Query: 352 HSLDTDTHVSTRVMGTF 368
SL D TR GT
Sbjct: 185 -SLKNDGK-RTRSKGTL 199
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 81/172 (47%), Gaps = 29/172 (16%)
Query: 210 LGQGGFGYV--------HKGVLTNGKVVAIKQLKAGSGQGE-REFQAEIEIISQV-HHRH 259
LG+G FG V K VA+K LK+ + + + + +E+E++ + H++
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 260 LVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTR--------------MKI 305
+++L+G CT ++ E+ L +L ++ P + + +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 306 ALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK--HSLD 355
A ARG+ YL K IHRD+ + N+L+ + K+ADFGLA+ H +D
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 204
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 99/229 (43%), Gaps = 17/229 (7%)
Query: 143 PPSNGPTAPLPTVPVSAFNEP---LSTSGSLDSDKPFPRQSPGMPVGNFKSTFTYEELKI 199
P G A LP++P A NE S + S+ + ST YE I
Sbjct: 332 PQKEGERA-LPSIPKLANNEKQGVRSHTVSVSETDDYAEIIDEEDTYTMPSTRDYE---I 387
Query: 200 ATDNFSEANLLGQGGFGYVHKGVLTN----GKVVAIKQLKAGSGQGERE-FQAEIEIISQ 254
+ +G+G FG VH+G+ + VAIK K + RE F E + Q
Sbjct: 388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQ 447
Query: 255 VHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLA 314
H H+V L+G T + ++ E L L + + ++ + + A + LA
Sbjct: 448 FDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALA 505
Query: 315 YLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTHVSTR 363
YL + +HRDI + N+L+ + K+ DFGL+++ D+ + +++
Sbjct: 506 YLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASK 551
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 83/179 (46%), Gaps = 13/179 (7%)
Query: 190 STFTYEELKIATDNFSEANLLGQGGFGYVHKGVLTN----GKVVAIKQLKAGSGQGERE- 244
ST YE I + +G+G FG VH+G+ + VAIK K + RE
Sbjct: 1 STRDYE---IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREK 57
Query: 245 FQAEIEIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK 304
F E + Q H H+V L+G T + ++ E L L + + ++ + +
Sbjct: 58 FLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVR-KYSLDLASLIL 115
Query: 305 IALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTHVSTR 363
A + LAYL + +HRDI + N+L+ + K+ DFGL+++ D+ + +++
Sbjct: 116 YAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 171
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 22/171 (12%)
Query: 203 NFSEANLLGQGGFGYVHKGVLTN-GKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLV 261
++++ ++G G FG V++ L + G++VAIK++ Q +R E++I+ ++ H ++V
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 81
Query: 262 SLVGYCTFGSQRL------LVYEFVPNKTLEFHLH----GKDRPVMNWPTRMKIALGSAR 311
L + ++ LV ++VP H + PV+ M R
Sbjct: 82 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF---R 138
Query: 312 GLAYLHEDCQPKIIHRDIKSANILLD-DSFEAKVADFGLAKHSLDTDTHVS 361
LAY+H I HRDIK N+LLD D+ K+ DFG AK + + +VS
Sbjct: 139 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 186
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 22/171 (12%)
Query: 203 NFSEANLLGQGGFGYVHKGVLTN-GKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLV 261
++++ ++G G FG V++ L + G++VAIK++ Q +R E++I+ ++ H ++V
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 89
Query: 262 SLVGYCTFGSQRL------LVYEFVPNKTLEFHLH----GKDRPVMNWPTRMKIALGSAR 311
L + ++ LV ++VP H + PV+ M R
Sbjct: 90 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF---R 146
Query: 312 GLAYLHEDCQPKIIHRDIKSANILLD-DSFEAKVADFGLAKHSLDTDTHVS 361
LAY+H I HRDIK N+LLD D+ K+ DFG AK + + +VS
Sbjct: 147 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 194
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 22/171 (12%)
Query: 203 NFSEANLLGQGGFGYVHKGVLTN-GKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLV 261
++++ ++G G FG V++ L + G++VAIK++ Q +R E++I+ ++ H ++V
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 88
Query: 262 SLVGYCTFGSQRL------LVYEFVPNKTLEFHLH----GKDRPVMNWPTRMKIALGSAR 311
L + ++ LV ++VP H + PV+ M R
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF---R 145
Query: 312 GLAYLHEDCQPKIIHRDIKSANILLD-DSFEAKVADFGLAKHSLDTDTHVS 361
LAY+H I HRDIK N+LLD D+ K+ DFG AK + + +VS
Sbjct: 146 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 193
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 22/171 (12%)
Query: 203 NFSEANLLGQGGFGYVHKGVLTN-GKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLV 261
++++ ++G G FG V++ L + G++VAIK++ Q +R E++I+ ++ H ++V
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 95
Query: 262 SLVGYCTFGSQRL------LVYEFVPNKTLEFHLH----GKDRPVMNWPTRMKIALGSAR 311
L + ++ LV ++VP H + PV+ M R
Sbjct: 96 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF---R 152
Query: 312 GLAYLHEDCQPKIIHRDIKSANILLD-DSFEAKVADFGLAKHSLDTDTHVS 361
LAY+H I HRDIK N+LLD D+ K+ DFG AK + + +VS
Sbjct: 153 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 200
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 22/171 (12%)
Query: 203 NFSEANLLGQGGFGYVHKGVLTN-GKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLV 261
++++ ++G G FG V++ L + G++VAIK++ Q +R E++I+ ++ H ++V
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 84
Query: 262 SLVGYCTFGSQRL------LVYEFVPNKTLEFHLH----GKDRPVMNWPTRMKIALGSAR 311
L + ++ LV ++VP H + PV+ M R
Sbjct: 85 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF---R 141
Query: 312 GLAYLHEDCQPKIIHRDIKSANILLD-DSFEAKVADFGLAKHSLDTDTHVS 361
LAY+H I HRDIK N+LLD D+ K+ DFG AK + + +VS
Sbjct: 142 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 189
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 22/171 (12%)
Query: 203 NFSEANLLGQGGFGYVHKGVLTN-GKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLV 261
++++ ++G G FG V++ L + G++VAIK++ Q +R E++I+ ++ H ++V
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 88
Query: 262 SLVGYCTFGSQRL------LVYEFVPNKTLEFHLH----GKDRPVMNWPTRMKIALGSAR 311
L + ++ LV ++VP H + PV+ M R
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF---R 145
Query: 312 GLAYLHEDCQPKIIHRDIKSANILLD-DSFEAKVADFGLAKHSLDTDTHVS 361
LAY+H I HRDIK N+LLD D+ K+ DFG AK + + +VS
Sbjct: 146 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 193
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 82/185 (44%), Gaps = 27/185 (14%)
Query: 202 DNFSEANLLGQGGFGYV--------HKGVLTNGKVVAIKQLKAGSGQGE-REFQAEIEII 252
D + LG+G FG V K VA+K LK + + + + +E+E++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMM 94
Query: 253 SQV-HHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------- 304
+ H+++++L+G CT ++ E+ L +L + P M + +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 305 -------IALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTD 357
ARG+ YL K IHRD+ + N+L+ ++ K+ADFGLA+ + D
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 358 THVST 362
+ T
Sbjct: 212 YYKKT 216
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 22/171 (12%)
Query: 203 NFSEANLLGQGGFGYVHKGVLTN-GKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLV 261
++++ ++G G FG V++ L + G++VAIK++ Q +R E++I+ ++ H ++V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 76
Query: 262 SLVGYCTFGSQRL------LVYEFVPNKTLEFHLH----GKDRPVMNWPTRMKIALGSAR 311
L + ++ LV ++VP H + PV+ M R
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF---R 133
Query: 312 GLAYLHEDCQPKIIHRDIKSANILLD-DSFEAKVADFGLAKHSLDTDTHVS 361
LAY+H I HRDIK N+LLD D+ K+ DFG AK + + +VS
Sbjct: 134 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 22/171 (12%)
Query: 203 NFSEANLLGQGGFGYVHKGVLTN-GKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLV 261
++++ ++G G FG V++ L + G++VAIK++ Q +R E++I+ ++ H ++V
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 80
Query: 262 SLVGYCTFGSQRL------LVYEFVPNKTLEFHLH----GKDRPVMNWPTRMKIALGSAR 311
L + ++ LV ++VP H + PV+ M R
Sbjct: 81 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF---R 137
Query: 312 GLAYLHEDCQPKIIHRDIKSANILLD-DSFEAKVADFGLAKHSLDTDTHVS 361
LAY+H I HRDIK N+LLD D+ K+ DFG AK + + +VS
Sbjct: 138 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 185
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 83/179 (46%), Gaps = 13/179 (7%)
Query: 190 STFTYEELKIATDNFSEANLLGQGGFGYVHKGVLTN----GKVVAIKQLKAGSGQGERE- 244
ST YE I + +G+G FG VH+G+ + VAIK K + RE
Sbjct: 29 STRDYE---IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREK 85
Query: 245 FQAEIEIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK 304
F E + Q H H+V L+G T + ++ E L L + + ++ + +
Sbjct: 86 FLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVR-KYSLDLASLIL 143
Query: 305 IALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTHVSTR 363
A + LAYL + +HRDI + N+L+ + K+ DFGL+++ D+ + +++
Sbjct: 144 YAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 199
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 22/171 (12%)
Query: 203 NFSEANLLGQGGFGYVHKGVLTN-GKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLV 261
++++ ++G G FG V++ L + G++VAIK++ Q +R E++I+ ++ H ++V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 76
Query: 262 SLVGYCTFGSQRL------LVYEFVPNKTLEFHLH----GKDRPVMNWPTRMKIALGSAR 311
L + ++ LV ++VP H + PV+ M R
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF---R 133
Query: 312 GLAYLHEDCQPKIIHRDIKSANILLD-DSFEAKVADFGLAKHSLDTDTHVS 361
LAY+H I HRDIK N+LLD D+ K+ DFG AK + + +VS
Sbjct: 134 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 22/171 (12%)
Query: 203 NFSEANLLGQGGFGYVHKGVLTN-GKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLV 261
++++ ++G G FG V++ L + G++VAIK++ Q +R E++I+ ++ H ++V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 76
Query: 262 SLVGYCTFGSQRL------LVYEFVPNKTLEFHLH----GKDRPVMNWPTRMKIALGSAR 311
L + ++ LV ++VP H + PV+ M R
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF---R 133
Query: 312 GLAYLHEDCQPKIIHRDIKSANILLD-DSFEAKVADFGLAKHSLDTDTHVS 361
LAY+H I HRDIK N+LLD D+ K+ DFG AK + + +VS
Sbjct: 134 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 22/171 (12%)
Query: 203 NFSEANLLGQGGFGYVHKGVLTN-GKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLV 261
++++ ++G G FG V++ L + G++VAIK++ Q +R E++I+ ++ H ++V
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIV 77
Query: 262 SLVGYCTFGSQRL------LVYEFVPNKTLEFHLH----GKDRPVMNWPTRMKIALGSAR 311
L + ++ LV ++VP H + PV+ M R
Sbjct: 78 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF---R 134
Query: 312 GLAYLHEDCQPKIIHRDIKSANILLD-DSFEAKVADFGLAKHSLDTDTHVS 361
LAY+H I HRDIK N+LLD D+ K+ DFG AK + + +VS
Sbjct: 135 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 182
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 82/155 (52%), Gaps = 7/155 (4%)
Query: 200 ATDNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQA--EIEIISQVH 256
+ +NF + +G+G +G V+K G+VVA+K+++ + A EI ++ +++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 257 HRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYL 316
H ++V L+ ++ LV+EF+ ++ L+ + + P +GLA+
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 317 HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
H +++HRD+K N+L++ K+ADFGLA+
Sbjct: 123 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 83/179 (46%), Gaps = 13/179 (7%)
Query: 190 STFTYEELKIATDNFSEANLLGQGGFGYVHKGVLTN----GKVVAIKQLKAGSGQGERE- 244
ST YE I + +G+G FG VH+G+ + VAIK K + RE
Sbjct: 1 STRDYE---IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREK 57
Query: 245 FQAEIEIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK 304
F E + Q H H+V L+G T + ++ E L L + + ++ + +
Sbjct: 58 FLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVR-KFSLDLASLIL 115
Query: 305 IALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTHVSTR 363
A + LAYL + +HRDI + N+L+ + K+ DFGL+++ D+ + +++
Sbjct: 116 YAYQLSTALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASK 171
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 83/179 (46%), Gaps = 13/179 (7%)
Query: 190 STFTYEELKIATDNFSEANLLGQGGFGYVHKGVLTN----GKVVAIKQLKAGSGQGERE- 244
ST YE I + +G+G FG VH+G+ + VAIK K + RE
Sbjct: 1 STRDYE---IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREK 57
Query: 245 FQAEIEIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK 304
F E + Q H H+V L+G T + ++ E L L + + ++ + +
Sbjct: 58 FLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVR-KYSLDLASLIL 115
Query: 305 IALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTHVSTR 363
A + LAYL + +HRDI + N+L+ + K+ DFGL+++ D+ + +++
Sbjct: 116 YAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 171
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 83/179 (46%), Gaps = 13/179 (7%)
Query: 190 STFTYEELKIATDNFSEANLLGQGGFGYVHKGVLTN----GKVVAIKQLKAGSGQGERE- 244
ST YE I + +G+G FG VH+G+ + VAIK K + RE
Sbjct: 4 STRDYE---IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREK 60
Query: 245 FQAEIEIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK 304
F E + Q H H+V L+G T + ++ E L L + + ++ + +
Sbjct: 61 FLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVR-KYSLDLASLIL 118
Query: 305 IALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTHVSTR 363
A + LAYL + +HRDI + N+L+ + K+ DFGL+++ D+ + +++
Sbjct: 119 YAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 174
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 83/179 (46%), Gaps = 13/179 (7%)
Query: 190 STFTYEELKIATDNFSEANLLGQGGFGYVHKGVLTN----GKVVAIKQLKAGSGQGERE- 244
ST YE I + +G+G FG VH+G+ + VAIK K + RE
Sbjct: 3 STRDYE---IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREK 59
Query: 245 FQAEIEIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK 304
F E + Q H H+V L+G T + ++ E L L + + ++ + +
Sbjct: 60 FLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVR-KYSLDLASLIL 117
Query: 305 IALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTHVSTR 363
A + LAYL + +HRDI + N+L+ + K+ DFGL+++ D+ + +++
Sbjct: 118 YAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 173
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 82/156 (52%), Gaps = 7/156 (4%)
Query: 199 IATDNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQA--EIEIISQV 255
+ +NF + +G+G +G V+K G+VVA+K+++ + A EI ++ ++
Sbjct: 4 VDMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 63
Query: 256 HHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAY 315
+H ++V L+ ++ LV+EF+ ++ L+ + + P +GLA+
Sbjct: 64 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 122
Query: 316 LHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
H +++HRD+K N+L++ K+ADFGLA+
Sbjct: 123 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 155
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 83/179 (46%), Gaps = 13/179 (7%)
Query: 190 STFTYEELKIATDNFSEANLLGQGGFGYVHKGVLTN----GKVVAIKQLKAGSGQGERE- 244
ST YE I + +G+G FG VH+G+ + VAIK K + RE
Sbjct: 6 STRDYE---IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREK 62
Query: 245 FQAEIEIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK 304
F E + Q H H+V L+G T + ++ E L L + + ++ + +
Sbjct: 63 FLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVR-KYSLDLASLIL 120
Query: 305 IALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTHVSTR 363
A + LAYL + +HRDI + N+L+ + K+ DFGL+++ D+ + +++
Sbjct: 121 YAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 176
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 81/185 (43%), Gaps = 27/185 (14%)
Query: 202 DNFSEANLLGQGGFGYV--------HKGVLTNGKVVAIKQLKAGSGQGE-REFQAEIEII 252
D + LG+G FG V K VA+K LK + + + + +E+E++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 253 SQV-HHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------- 304
+ H+++++L+G CT ++ E+ L +L + P M + +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 305 -------IALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTD 357
ARG+ YL K IHRD+ + N+L+ ++ K+ADFGLA+ + D
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 358 THVST 362
T
Sbjct: 212 XXKKT 216
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 82/155 (52%), Gaps = 7/155 (4%)
Query: 200 ATDNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQA--EIEIISQVH 256
+ +NF + +G+G +G V+K G+VVA+K+++ + A EI ++ +++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 257 HRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYL 316
H ++V L+ ++ LV+EF+ ++ L+ + + P +GLA+
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 317 HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
H +++HRD+K N+L++ K+ADFGLA+
Sbjct: 122 HSH---RVLHRDLKPENLLINTEGAIKLADFGLAR 153
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 82/185 (44%), Gaps = 27/185 (14%)
Query: 202 DNFSEANLLGQGGFGYV--------HKGVLTNGKVVAIKQLKAGSGQGE-REFQAEIEII 252
D + LG+G FG V K VA+K LK + + + + +E+E++
Sbjct: 27 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 86
Query: 253 SQV-HHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------- 304
+ H+++++L+G CT ++ E+ L +L + P M + +
Sbjct: 87 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 146
Query: 305 -------IALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTD 357
ARG+ YL K IHRD+ + N+L+ ++ K+ADFGLA+ + D
Sbjct: 147 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 203
Query: 358 THVST 362
+ T
Sbjct: 204 YYKKT 208
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 82/185 (44%), Gaps = 27/185 (14%)
Query: 202 DNFSEANLLGQGGFGYV--------HKGVLTNGKVVAIKQLKAGSGQGE-REFQAEIEII 252
D + LG+G FG V K VA+K LK + + + + +E+E++
Sbjct: 24 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 83
Query: 253 SQV-HHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------- 304
+ H+++++L+G CT ++ E+ L +L + P M + +
Sbjct: 84 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 143
Query: 305 -------IALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTD 357
ARG+ YL K IHRD+ + N+L+ ++ K+ADFGLA+ + D
Sbjct: 144 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 200
Query: 358 THVST 362
+ T
Sbjct: 201 YYKKT 205
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 82/159 (51%), Gaps = 15/159 (9%)
Query: 200 ATDNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQA--EIEIISQVH 256
+ +NF + +G+G +G V+K G+VVA+K+++ + A EI ++ +++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 257 HRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFH----LHGKDRPVMNWPTRMKIALGSARG 312
H ++V L+ ++ LV+EF+ +F L G P++ +G
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIK-----SYLFQLLQG 118
Query: 313 LAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
LA+ H +++HRD+K N+L++ K+ADFGLA+
Sbjct: 119 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 81/153 (52%), Gaps = 7/153 (4%)
Query: 202 DNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQA--EIEIISQVHHR 258
+NF + +G+G +G V+K G+VVA+K+++ + A EI ++ +++H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 259 HLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHE 318
++V L+ ++ LV+EF+ ++ L+ + + P +GLA+ H
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 128
Query: 319 DCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+++HRD+K N+L++ K+ADFGLA+
Sbjct: 129 H---RVLHRDLKPQNLLINTEGAIKLADFGLAR 158
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 81/153 (52%), Gaps = 7/153 (4%)
Query: 202 DNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQA--EIEIISQVHHR 258
+NF + +G+G +G V+K G+VVA+K+++ + A EI ++ +++H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 259 HLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHE 318
++V L+ ++ LV+EF+ ++ L+ + + P +GLA+ H
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 128
Query: 319 DCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+++HRD+K N+L++ K+ADFGLA+
Sbjct: 129 H---RVLHRDLKPQNLLINTEGAIKLADFGLAR 158
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 82/155 (52%), Gaps = 7/155 (4%)
Query: 200 ATDNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQA--EIEIISQVH 256
+ +NF + +G+G +G V+K G+VVA+K+++ + A EI ++ +++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 257 HRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYL 316
H ++V L+ ++ LV+EF+ ++ L+ + + P +GLA+
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 317 HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
H +++HRD+K N+L++ K+ADFGLA+
Sbjct: 122 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 82/185 (44%), Gaps = 27/185 (14%)
Query: 202 DNFSEANLLGQGGFGYV--------HKGVLTNGKVVAIKQLKAGSGQGE-REFQAEIEII 252
D + LG+G FG V K VA+K LK + + + + +E+E++
Sbjct: 22 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 81
Query: 253 SQV-HHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------- 304
+ H+++++L+G CT ++ E+ L +L + P M + +
Sbjct: 82 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 141
Query: 305 -------IALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTD 357
ARG+ YL K IHRD+ + N+L+ ++ K+ADFGLA+ + D
Sbjct: 142 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNID 198
Query: 358 THVST 362
+ T
Sbjct: 199 YYKKT 203
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 82/155 (52%), Gaps = 7/155 (4%)
Query: 200 ATDNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQA--EIEIISQVH 256
+ +NF + +G+G +G V+K G+VVA+K+++ + A EI ++ +++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 257 HRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYL 316
H ++V L+ ++ LV+EF+ ++ L+ + + P +GLA+
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 317 HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
H +++HRD+K N+L++ K+ADFGLA+
Sbjct: 123 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 82/155 (52%), Gaps = 7/155 (4%)
Query: 200 ATDNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQA--EIEIISQVH 256
+ +NF + +G+G +G V+K G+VVA+K+++ + A EI ++ +++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 257 HRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYL 316
H ++V L+ ++ LV+EF+ ++ L+ + + P +GLA+
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 317 HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
H +++HRD+K N+L++ K+ADFGLA+
Sbjct: 122 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 82/155 (52%), Gaps = 7/155 (4%)
Query: 200 ATDNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQA--EIEIISQVH 256
+ +NF + +G+G +G V+K G+VVA+K+++ + A EI ++ +++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 257 HRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYL 316
H ++V L+ ++ LV+EF+ ++ L+ + + P +GLA+
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 317 HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
H +++HRD+K N+L++ K+ADFGLA+
Sbjct: 123 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 79/172 (45%), Gaps = 13/172 (7%)
Query: 190 STFTYEELKIATDNFSEANLLGQGGFGYVHKGVLTN----GKVVAIKQLKAGSGQGERE- 244
ST YE I + +G+G FG VH+G+ + VAIK K + RE
Sbjct: 1 STRDYE---IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREK 57
Query: 245 FQAEIEIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK 304
F E + Q H H+V L+G T + ++ E L L + + ++ + +
Sbjct: 58 FLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVR-KFSLDLASLIL 115
Query: 305 IALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDT 356
A + LAYL + +HRDI + N+L+ + K+ DFGL+++ D+
Sbjct: 116 YAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 164
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 80/155 (51%), Gaps = 7/155 (4%)
Query: 200 ATDNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQA--EIEIISQVH 256
+ +NF + +G+G +G V+K G+VVA+K+++ + A EI ++ +++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 257 HRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYL 316
H ++V L+ ++ LV+EF+ +F + + P +GLA+
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKDF-MDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 317 HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
H +++HRD+K N+L++ K+ADFGLA+
Sbjct: 120 HSH---RVLHRDLKPENLLINTEGAIKLADFGLAR 151
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 82/155 (52%), Gaps = 7/155 (4%)
Query: 200 ATDNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQA--EIEIISQVH 256
+ +NF + +G+G +G V+K G+VVA+K+++ + A EI ++ +++
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 257 HRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYL 316
H ++V L+ ++ LV+EF+ ++ L+ + + P +GLA+
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 123
Query: 317 HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
H +++HRD+K N+L++ K+ADFGLA+
Sbjct: 124 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 155
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 80/172 (46%), Gaps = 29/172 (16%)
Query: 210 LGQGGFGYV--------HKGVLTNGKVVAIKQLKAGSGQGE-REFQAEIEIISQV-HHRH 259
LG+G FG V K VA+K LK+ + + + + +E+E++ + H++
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 260 LVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTR--------------MKI 305
+++L+G CT ++ E+ L +L + P + + +
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 306 ALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK--HSLD 355
A ARG+ YL K IHRD+ + N+L+ + K+ADFGLA+ H +D
Sbjct: 197 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 245
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 81/185 (43%), Gaps = 27/185 (14%)
Query: 202 DNFSEANLLGQGGFGYV--------HKGVLTNGKVVAIKQLKAGSGQGE-REFQAEIEII 252
D + LG+G FG V K VA+K LK + + + + +E+E++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 253 SQV-HHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------- 304
+ H++++ L+G CT ++ E+ L +L + P M + +
Sbjct: 95 KMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 305 -------IALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTD 357
ARG+ YL K IHRD+ + N+L+ ++ K+ADFGLA+ + D
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 358 THVST 362
+ T
Sbjct: 212 YYKKT 216
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 70/151 (46%), Gaps = 12/151 (7%)
Query: 202 DNFSEANLLGQGGFGYVHKG-VLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHL 260
DNF + +G+G G V V ++GK+VA+K++ Q E+ I+ H ++
Sbjct: 32 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 88
Query: 261 VSLVGYCTFGSQRLLVYEFVPNKTL-EFHLHGKDRPVMNWPTRMKIALGSARGLAYLHED 319
V + G + +V EF+ L + H + MN + L + L+ LH
Sbjct: 89 VEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQ 144
Query: 320 CQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
+IHRDIKS +ILL K++DFG
Sbjct: 145 ---GVIHRDIKSDSILLTHDGRVKLSDFGFC 172
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 82/155 (52%), Gaps = 7/155 (4%)
Query: 200 ATDNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQA--EIEIISQVH 256
+ +NF + +G+G +G V+K G+VVA+K+++ + A EI ++ +++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 257 HRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYL 316
H ++V L+ ++ LV+EF+ ++ L+ + + P +GLA+
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 317 HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
H +++HRD+K N+L++ K+ADFGLA+
Sbjct: 121 HSH---RVLHRDLKPENLLINTEGAIKLADFGLAR 152
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 81/185 (43%), Gaps = 27/185 (14%)
Query: 202 DNFSEANLLGQGGFGYV--------HKGVLTNGKVVAIKQLKAGSGQGE-REFQAEIEII 252
D + LG+G FG V K VA+K LK + + + + +E+E++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 253 SQV-HHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRP--------------VM 297
+ H+++++L+G CT ++ E+ L +L + P M
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQM 154
Query: 298 NWPTRMKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTD 357
+ + ARG+ YL K IHRD+ + N+L+ ++ K+ADFGLA+ + D
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 358 THVST 362
T
Sbjct: 212 XXKKT 216
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 82/159 (51%), Gaps = 15/159 (9%)
Query: 200 ATDNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQA--EIEIISQVH 256
+ +NF + +G+G +G V+K G+VVA+K+++ + A EI ++ +++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 257 HRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFH----LHGKDRPVMNWPTRMKIALGSARG 312
H ++V L+ ++ LV+EF+ +F L G P++ +G
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIK-----SYLFQLLQG 117
Query: 313 LAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
LA+ H +++HRD+K N+L++ K+ADFGLA+
Sbjct: 118 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 82/155 (52%), Gaps = 7/155 (4%)
Query: 200 ATDNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQA--EIEIISQVH 256
+ +NF + +G+G +G V+K G+VVA+K+++ + A EI ++ +++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 257 HRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYL 316
H ++V L+ ++ LV+EF+ ++ L+ + + P +GLA+
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 317 HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
H +++HRD+K N+L++ K+ADFGLA+
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 70/151 (46%), Gaps = 12/151 (7%)
Query: 202 DNFSEANLLGQGGFGYVHKG-VLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHL 260
DNF + +G+G G V V ++GK+VA+K++ Q E+ I+ H ++
Sbjct: 77 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 133
Query: 261 VSLVGYCTFGSQRLLVYEFVPNKTL-EFHLHGKDRPVMNWPTRMKIALGSARGLAYLHED 319
V + G + +V EF+ L + H + MN + L + L+ LH
Sbjct: 134 VEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQ 189
Query: 320 CQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
+IHRDIKS +ILL K++DFG
Sbjct: 190 ---GVIHRDIKSDSILLTHDGRVKLSDFGFC 217
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 81/170 (47%), Gaps = 20/170 (11%)
Query: 198 KIATDNFSEANLLGQGGFGYVHKGVLTNG------KVVAIKQL-KAGSGQGEREFQAEIE 250
++ N + LG G FG V++G ++ VA+K L + S Q E +F E
Sbjct: 27 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 86
Query: 251 IISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------ 304
IIS+++H+++V +G R ++ E + L+ L + RP + P+ +
Sbjct: 87 IISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLH 145
Query: 305 IALGSARGLAYLHEDCQPKIIHRDIKSANILLDD---SFEAKVADFGLAK 351
+A A G YL E+ IHRDI + N LL AK+ DFG+A+
Sbjct: 146 VARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 192
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 82/185 (44%), Gaps = 27/185 (14%)
Query: 202 DNFSEANLLGQGGFGYV--------HKGVLTNGKVVAIKQLKAGSGQGE-REFQAEIEII 252
D + LG+G FG V K VA+K LK + + + + +E+E++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 253 SQV-HHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------- 304
+ H+++++L+G CT ++ E+ L +L + P M + +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 305 -------IALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTD 357
ARG+ YL K IHRD+ + N+L+ ++ ++ADFGLA+ + D
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNID 211
Query: 358 THVST 362
+ T
Sbjct: 212 YYKKT 216
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 80/172 (46%), Gaps = 29/172 (16%)
Query: 210 LGQGGFGYV--------HKGVLTNGKVVAIKQLKAGSGQGE-REFQAEIEIISQV-HHRH 259
LG+G FG V K VA+K LK+ + + + + +E+E++ + H++
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 260 LVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTR--------------MKI 305
+++L+G CT ++ E+ L +L + P + + +
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 306 ALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK--HSLD 355
A ARG+ YL K IHRD+ + N+L+ + K+ADFGLA+ H +D
Sbjct: 145 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 193
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 82/159 (51%), Gaps = 15/159 (9%)
Query: 200 ATDNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQA--EIEIISQVH 256
+ +NF + +G+G +G V+K G+VVA+K+++ + A EI ++ +++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 257 HRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFH----LHGKDRPVMNWPTRMKIALGSARG 312
H ++V L+ ++ LV+EF+ +F L G P++ +G
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIK-----SYLFQLLQG 118
Query: 313 LAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
LA+ H +++HRD+K N+L++ K+ADFGLA+
Sbjct: 119 LAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLAR 154
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 82/155 (52%), Gaps = 7/155 (4%)
Query: 200 ATDNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQA--EIEIISQVH 256
+ +NF + +G+G +G V+K G+VVA+K+++ + A EI ++ +++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 257 HRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYL 316
H ++V L+ ++ LV+EF+ ++ L+ + + P +GLA+
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 317 HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
H +++HRD+K N+L++ K+ADFGLA+
Sbjct: 121 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 152
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 70/151 (46%), Gaps = 12/151 (7%)
Query: 202 DNFSEANLLGQGGFGYVHKG-VLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHL 260
DNF + +G+G G V V ++GK+VA+K++ Q E+ I+ H ++
Sbjct: 34 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 90
Query: 261 VSLVGYCTFGSQRLLVYEFVPNKTL-EFHLHGKDRPVMNWPTRMKIALGSARGLAYLHED 319
V + G + +V EF+ L + H + MN + L + L+ LH
Sbjct: 91 VEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQ 146
Query: 320 CQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
+IHRDIKS +ILL K++DFG
Sbjct: 147 ---GVIHRDIKSDSILLTHDGRVKLSDFGFC 174
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 82/155 (52%), Gaps = 7/155 (4%)
Query: 200 ATDNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQA--EIEIISQVH 256
+ +NF + +G+G +G V+K G+VVA+K+++ + A EI ++ +++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 257 HRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYL 316
H ++V L+ ++ LV+EF+ ++ L+ + + P +GLA+
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 317 HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
H +++HRD+K N+L++ K+ADFGLA+
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 81/170 (47%), Gaps = 20/170 (11%)
Query: 198 KIATDNFSEANLLGQGGFGYVHKGVLTNGK------VVAIKQL-KAGSGQGEREFQAEIE 250
++ N + LG G FG V++G ++ VA+K L + S Q E +F E
Sbjct: 41 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 100
Query: 251 IISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------ 304
IIS+++H+++V +G R ++ E + L+ L + RP + P+ +
Sbjct: 101 IISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLH 159
Query: 305 IALGSARGLAYLHEDCQPKIIHRDIKSANILLDD---SFEAKVADFGLAK 351
+A A G YL E+ IHRDI + N LL AK+ DFG+A+
Sbjct: 160 VARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 82/155 (52%), Gaps = 7/155 (4%)
Query: 200 ATDNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQA--EIEIISQVH 256
+ +NF + +G+G +G V+K G+VVA+K+++ + A EI ++ +++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 257 HRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYL 316
H ++V L+ ++ LV+EF+ ++ L+ + + P +GLA+
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 317 HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
H +++HRD+K N+L++ K+ADFGLA+
Sbjct: 121 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 152
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 82/155 (52%), Gaps = 7/155 (4%)
Query: 200 ATDNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQA--EIEIISQVH 256
+ +NF + +G+G +G V+K G+VVA+K+++ + A EI ++ +++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 257 HRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYL 316
H ++V L+ ++ LV+EF+ ++ L+ + + P +GLA+
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 317 HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
H +++HRD+K N+L++ K+ADFGLA+
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 80/172 (46%), Gaps = 29/172 (16%)
Query: 210 LGQGGFGYV--------HKGVLTNGKVVAIKQLKAGSGQGE-REFQAEIEIISQV-HHRH 259
LG+G FG V K VA+K LK+ + + + + +E+E++ + H++
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 260 LVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTR--------------MKI 305
+++L+G CT ++ E+ L +L + P + + +
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 306 ALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK--HSLD 355
A ARG+ YL K IHRD+ + N+L+ + K+ADFGLA+ H +D
Sbjct: 148 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 196
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 80/172 (46%), Gaps = 29/172 (16%)
Query: 210 LGQGGFGYV--------HKGVLTNGKVVAIKQLKAGSGQGE-REFQAEIEIISQV-HHRH 259
LG+G FG V K VA+K LK+ + + + + +E+E++ + H++
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 260 LVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTR--------------MKI 305
+++L+G CT ++ E+ L +L + P + + +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 306 ALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK--HSLD 355
A ARG+ YL K IHRD+ + N+L+ + K+ADFGLA+ H +D
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 204
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 80/172 (46%), Gaps = 29/172 (16%)
Query: 210 LGQGGFGYV--------HKGVLTNGKVVAIKQLKAGSGQGE-REFQAEIEIISQV-HHRH 259
LG+G FG V K VA+K LK+ + + + + +E+E++ + H++
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 260 LVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTR--------------MKI 305
+++L+G CT ++ E+ L +L + P + + +
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 306 ALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK--HSLD 355
A ARG+ YL K IHRD+ + N+L+ + K+ADFGLA+ H +D
Sbjct: 149 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 197
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 75/164 (45%), Gaps = 14/164 (8%)
Query: 198 KIATDNFSEANLLGQGGFGYVHKG-VLTNGKVVAIKQLKAGSGQGEREFQA---EIEIIS 253
++ DNF +LG+G FG V V G + A+K LK + + + E I+S
Sbjct: 19 RLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILS 78
Query: 254 QV-HHRHLVSLVGYCTFGS--QRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSA 310
+H L L +C F + + V EFV L FH+ K R R A
Sbjct: 79 LARNHPFLTQL--FCCFQTPDRLFFVMEFVNGGDLMFHIQ-KSRRFDEARARF-YAAEII 134
Query: 311 RGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSL 354
L +LH+ II+RD+K N+LLD K+ADFG+ K +
Sbjct: 135 SALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGI 175
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 81/173 (46%), Gaps = 10/173 (5%)
Query: 196 ELKIATDNFSEANLLGQGGFGYVHKGVLTN----GKVVAIKQLKAGSGQGERE-FQAEIE 250
+ +I + +G+G FG VH+G+ + VAIK K + RE F E
Sbjct: 1 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 60
Query: 251 IISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSA 310
+ Q H H+V L+G T + ++ E L L + + ++ + + A +
Sbjct: 61 TMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLS 118
Query: 311 RGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTHVSTR 363
LAYL + +HRDI + N+L+ + K+ DFGL+++ D+ + +++
Sbjct: 119 TALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 168
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 81/153 (52%), Gaps = 7/153 (4%)
Query: 202 DNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQA--EIEIISQVHHR 258
+NF + +G+G +G V+K G+VVA+K+++ + A EI ++ +++H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 259 HLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHE 318
++V L+ ++ LV+EF+ ++ L+ + + P +GLA+ H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 319 DCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+++HRD+K N+L++ K+ADFGLA+
Sbjct: 121 H---RVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 81/153 (52%), Gaps = 7/153 (4%)
Query: 202 DNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQA--EIEIISQVHHR 258
+NF + +G+G +G V+K G+VVA+K+++ + A EI ++ +++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 259 HLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHE 318
++V L+ ++ LV+EF+ ++ L+ + + P +GLA+ H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 319 DCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+++HRD+K N+L++ K+ADFGLA+
Sbjct: 122 H---RVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 81/153 (52%), Gaps = 7/153 (4%)
Query: 202 DNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQA--EIEIISQVHHR 258
+NF + +G+G +G V+K G+VVA+K+++ + A EI ++ +++H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 259 HLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHE 318
++V L+ ++ LV+EF+ ++ L+ + + P +GLA+ H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 319 DCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+++HRD+K N+L++ K+ADFGLA+
Sbjct: 121 H---RVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 80/172 (46%), Gaps = 29/172 (16%)
Query: 210 LGQGGFGYV--------HKGVLTNGKVVAIKQLKAGSGQGE-REFQAEIEIISQV-HHRH 259
LG+G FG V K VA+K LK+ + + + + +E+E++ + H++
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 260 LVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTR--------------MKI 305
+++L+G CT ++ E+ L +L + P + + +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 306 ALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK--HSLD 355
A ARG+ YL K IHRD+ + N+L+ + K+ADFGLA+ H +D
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 204
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 82/159 (51%), Gaps = 15/159 (9%)
Query: 200 ATDNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQA--EIEIISQVH 256
+ +NF + +G+G +G V+K G+VVA+K+++ + A EI ++ +++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 257 HRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFH----LHGKDRPVMNWPTRMKIALGSARG 312
H ++V L+ ++ LV+EF+ +F L G P++ +G
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIK-----SYLFQLLQG 116
Query: 313 LAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
LA+ H +++HRD+K N+L++ K+ADFGLA+
Sbjct: 117 LAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLAR 152
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 80/172 (46%), Gaps = 29/172 (16%)
Query: 210 LGQGGFGYV--------HKGVLTNGKVVAIKQLKAGSGQGE-REFQAEIEIISQV-HHRH 259
LG+G FG V K VA+K LK+ + + + + +E+E++ + H++
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 260 LVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTR--------------MKI 305
+++L+G CT ++ E+ L +L + P + + +
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 306 ALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK--HSLD 355
A ARG+ YL K IHRD+ + N+L+ + K+ADFGLA+ H +D
Sbjct: 141 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 189
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 81/153 (52%), Gaps = 7/153 (4%)
Query: 202 DNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQA--EIEIISQVHHR 258
+NF + +G+G +G V+K G+VVA+K+++ + A EI ++ +++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 259 HLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHE 318
++V L+ ++ LV+EF+ ++ L+ + + P +GLA+ H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 319 DCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+++HRD+K N+L++ K+ADFGLA+
Sbjct: 122 H---RVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 81/153 (52%), Gaps = 7/153 (4%)
Query: 202 DNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQA--EIEIISQVHHR 258
+NF + +G+G +G V+K G+VVA+K+++ + A EI ++ +++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 259 HLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHE 318
++V L+ ++ LV+EF+ ++ L+ + + P +GLA+ H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 319 DCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+++HRD+K N+L++ K+ADFGLA+
Sbjct: 122 H---RVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 81/153 (52%), Gaps = 7/153 (4%)
Query: 202 DNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQA--EIEIISQVHHR 258
+NF + +G+G +G V+K G+VVA+K+++ + A EI ++ +++H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 259 HLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHE 318
++V L+ ++ LV+EF+ ++ L+ + + P +GLA+ H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 319 DCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+++HRD+K N+L++ K+ADFGLA+
Sbjct: 121 H---RVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 70/151 (46%), Gaps = 12/151 (7%)
Query: 202 DNFSEANLLGQGGFGYVHKG-VLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHL 260
DNF + +G+G G V V ++GK+VA+K++ Q E+ I+ H ++
Sbjct: 23 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 79
Query: 261 VSLVGYCTFGSQRLLVYEFVPNKTL-EFHLHGKDRPVMNWPTRMKIALGSARGLAYLHED 319
V + G + +V EF+ L + H + MN + L + L+ LH
Sbjct: 80 VEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQ 135
Query: 320 CQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
+IHRDIKS +ILL K++DFG
Sbjct: 136 ---GVIHRDIKSDSILLTHDGRVKLSDFGFC 163
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 65/143 (45%), Gaps = 9/143 (6%)
Query: 210 LGQGGFGYVHKGVLTN-GKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLVGYCT 268
+G+G G V + GK VA+K++ Q E+ I+ HH ++V +
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 269 FGSQRLLVYEFVPNKTL-EFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHR 327
G + +V EF+ L + H + MN + L R L+YLH +IHR
Sbjct: 113 VGDELWVVMEFLEGGALTDIVTHTR----MNEEQIATVCLSVLRALSYLHNQ---GVIHR 165
Query: 328 DIKSANILLDDSFEAKVADFGLA 350
DIKS +ILL K++DFG
Sbjct: 166 DIKSDSILLTSDGRIKLSDFGFC 188
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 83/153 (54%), Gaps = 9/153 (5%)
Query: 202 DNFSEANLLGQGGFGYVHKGV--LTNGKVVAIKQLKAGSGQGE-REFQAEIEIISQVHHR 258
+ + + + LG+G + V+KG LT+ +VA+K+++ +G E+ ++ + H
Sbjct: 2 ETYIKLDKLGEGTYATVYKGKSKLTDN-LVALKEIRLEHEEGAPCTAIREVSLLKDLKHA 60
Query: 259 HLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHE 318
++V+L LV+E++ +K L+ +L ++N RGLAY H
Sbjct: 61 NIVTLHDIIHTEKSLTLVFEYL-DKDLKQYLDDCGN-IINMHNVKLFLFQLLRGLAYCH- 117
Query: 319 DCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ K++HRD+K N+L+++ E K+ADFGLA+
Sbjct: 118 --RQKVLHRDLKPQNLLINERGELKLADFGLAR 148
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 81/153 (52%), Gaps = 7/153 (4%)
Query: 202 DNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQA--EIEIISQVHHR 258
+NF + +G+G +G V+K G+VVA+K+++ + A EI ++ +++H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 259 HLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHE 318
++V L+ ++ LV+EF+ ++ L+ + + P +GLA+ H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 319 DCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+++HRD+K N+L++ K+ADFGLA+
Sbjct: 121 H---RVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 87/178 (48%), Gaps = 15/178 (8%)
Query: 198 KIATDNFSEANLLGQGGFG--YVHKGVLTNGKVVAIKQLKAGSGQGE---REFQAEIEII 252
KI + + + LG GG Y+ + + N KV AIK + + E + F+ E+
Sbjct: 7 KIINERYKIVDKLGGGGMSTVYLAEDTILNIKV-AIKAIFIPPREKEETLKRFEREVHNS 65
Query: 253 SQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHL--HGKDRPVMNWPTRMKIALGSA 310
SQ+ H+++VS++ LV E++ TL ++ HG ++ T +
Sbjct: 66 SQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGP----LSVDTAINFTNQIL 121
Query: 311 RGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTHVSTRVMGTF 368
G+ + H+ +I+HRDIK NIL+D + K+ DFG+AK +T + V+GT
Sbjct: 122 DGIKHAHD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTV 176
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 81/153 (52%), Gaps = 7/153 (4%)
Query: 202 DNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQA--EIEIISQVHHR 258
+NF + +G+G +G V+K G+VVA+K+++ + A EI ++ +++H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 259 HLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHE 318
++V L+ ++ LV+EF+ ++ L+ + + P +GLA+ H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 319 DCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+++HRD+K N+L++ K+ADFGLA+
Sbjct: 123 H---RVLHRDLKPQNLLINTEGAIKLADFGLAR 152
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 70/151 (46%), Gaps = 12/151 (7%)
Query: 202 DNFSEANLLGQGGFGYVHKG-VLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHL 260
DNF + +G+G G V V ++GK+VA+K++ Q E+ I+ H ++
Sbjct: 27 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 83
Query: 261 VSLVGYCTFGSQRLLVYEFVPNKTL-EFHLHGKDRPVMNWPTRMKIALGSARGLAYLHED 319
V + G + +V EF+ L + H + MN + L + L+ LH
Sbjct: 84 VEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQ 139
Query: 320 CQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
+IHRDIKS +ILL K++DFG
Sbjct: 140 ---GVIHRDIKSDSILLTHDGRVKLSDFGFC 167
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 82/155 (52%), Gaps = 7/155 (4%)
Query: 200 ATDNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQA--EIEIISQVH 256
+ +NF + +G+G +G V+K G+VVA+K+++ + A EI ++ +++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 257 HRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYL 316
H ++V L+ ++ LV+EF+ ++ L+ + + P +GLA+
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 317 HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
H +++HRD+K N+L++ K+ADFGLA+
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 82/181 (45%), Gaps = 12/181 (6%)
Query: 169 SLDSDKPFPRQSPGMPVGNFKSTFTYEELKIATDNFSEANLLGQGGFGYVHKGVLTNGKV 228
SL S + FPR++ +++ +E I + L+G+G FG V+ G
Sbjct: 7 SLLSARSFPRKAS-------QTSIFLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHGEVA 59
Query: 229 VAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFH 288
+ + ++ + + F+ E+ Q H ++V +G C ++ +TL +
Sbjct: 60 IRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTL-YS 118
Query: 289 LHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFG 348
+ + V++ +IA +G+ YLH I+H+D+KS N+ D+ + + DFG
Sbjct: 119 VVRDAKIVLDVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYDNG-KVVITDFG 174
Query: 349 L 349
L
Sbjct: 175 L 175
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 80/170 (47%), Gaps = 20/170 (11%)
Query: 198 KIATDNFSEANLLGQGGFGYVHKGVLTNG------KVVAIKQL-KAGSGQGEREFQAEIE 250
++ N + LG G FG V++G ++ VA+K L + S Q E +F E
Sbjct: 27 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 86
Query: 251 IISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------ 304
IIS+ +H+++V +G R ++ E + L+ L + RP + P+ +
Sbjct: 87 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLH 145
Query: 305 IALGSARGLAYLHEDCQPKIIHRDIKSANILLDD---SFEAKVADFGLAK 351
+A A G YL E+ IHRDI + N LL AK+ DFG+A+
Sbjct: 146 VARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 192
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 80/170 (47%), Gaps = 20/170 (11%)
Query: 198 KIATDNFSEANLLGQGGFGYVHKGVLTNG------KVVAIKQL-KAGSGQGEREFQAEIE 250
++ N + LG G FG V++G ++ VA+K L + S Q E +F E
Sbjct: 67 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 126
Query: 251 IISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------ 304
IIS+ +H+++V +G R ++ E + L+ L + RP + P+ +
Sbjct: 127 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLH 185
Query: 305 IALGSARGLAYLHEDCQPKIIHRDIKSANILLDD---SFEAKVADFGLAK 351
+A A G YL E+ IHRDI + N LL AK+ DFG+A+
Sbjct: 186 VARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 232
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 80/170 (47%), Gaps = 20/170 (11%)
Query: 198 KIATDNFSEANLLGQGGFGYVHKGVLTNG------KVVAIKQL-KAGSGQGEREFQAEIE 250
++ N + LG G FG V++G ++ VA+K L + S Q E +F E
Sbjct: 33 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 92
Query: 251 IISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------ 304
IIS+ +H+++V +G R ++ E + L+ L + RP + P+ +
Sbjct: 93 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLH 151
Query: 305 IALGSARGLAYLHEDCQPKIIHRDIKSANILLDD---SFEAKVADFGLAK 351
+A A G YL E+ IHRDI + N LL AK+ DFG+A+
Sbjct: 152 VARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 198
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 80/170 (47%), Gaps = 20/170 (11%)
Query: 198 KIATDNFSEANLLGQGGFGYVHKGVLTNG------KVVAIKQL-KAGSGQGEREFQAEIE 250
++ N + LG G FG V++G ++ VA+K L + S Q E +F E
Sbjct: 44 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 103
Query: 251 IISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------ 304
IIS+ +H+++V +G R ++ E + L+ L + RP + P+ +
Sbjct: 104 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLH 162
Query: 305 IALGSARGLAYLHEDCQPKIIHRDIKSANILLDD---SFEAKVADFGLAK 351
+A A G YL E+ IHRDI + N LL AK+ DFG+A+
Sbjct: 163 VARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 209
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 73/154 (47%), Gaps = 15/154 (9%)
Query: 204 FSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQ---AEIEIISQVHHRH 259
FS+ +G G FG V+ + N +VVAIK++ Q ++Q E+ + ++ H +
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 260 LVSLVGYCTFGSQRLLVYEFV---PNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYL 316
+ G LV E+ + LE H +P+ + G+ +GLAYL
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVH----KKPLQEVEI-AAVTHGALQGLAYL 170
Query: 317 HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
H +IHRD+K+ NILL + K+ DFG A
Sbjct: 171 HSH---NMIHRDVKAGNILLSEPGLVKLGDFGSA 201
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 80/170 (47%), Gaps = 20/170 (11%)
Query: 198 KIATDNFSEANLLGQGGFGYVHKGVLTNGK------VVAIKQL-KAGSGQGEREFQAEIE 250
++ N + LG G FG V++G ++ VA+K L + S Q E +F E
Sbjct: 41 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 100
Query: 251 IISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------ 304
IIS+ +H+++V +G R ++ E + L+ L + RP + P+ +
Sbjct: 101 IISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLH 159
Query: 305 IALGSARGLAYLHEDCQPKIIHRDIKSANILLDD---SFEAKVADFGLAK 351
+A A G YL E+ IHRDI + N LL AK+ DFG+A+
Sbjct: 160 VARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 80/170 (47%), Gaps = 20/170 (11%)
Query: 198 KIATDNFSEANLLGQGGFGYVHKGVLTNG------KVVAIKQL-KAGSGQGEREFQAEIE 250
++ N + LG G FG V++G ++ VA+K L + S Q E +F E
Sbjct: 26 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 85
Query: 251 IISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------ 304
IIS+ +H+++V +G R ++ E + L+ L + RP + P+ +
Sbjct: 86 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLH 144
Query: 305 IALGSARGLAYLHEDCQPKIIHRDIKSANILLDD---SFEAKVADFGLAK 351
+A A G YL E+ IHRDI + N LL AK+ DFG+A+
Sbjct: 145 VARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 191
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 80/170 (47%), Gaps = 20/170 (11%)
Query: 198 KIATDNFSEANLLGQGGFGYVHKGVLTNG------KVVAIKQL-KAGSGQGEREFQAEIE 250
++ N + LG G FG V++G ++ VA+K L + S Q E +F E
Sbjct: 43 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 102
Query: 251 IISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------ 304
IIS+ +H+++V +G R ++ E + L+ L + RP + P+ +
Sbjct: 103 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLH 161
Query: 305 IALGSARGLAYLHEDCQPKIIHRDIKSANILLDD---SFEAKVADFGLAK 351
+A A G YL E+ IHRDI + N LL AK+ DFG+A+
Sbjct: 162 VARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 208
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 80/170 (47%), Gaps = 20/170 (11%)
Query: 198 KIATDNFSEANLLGQGGFGYVHKGVLTNGK------VVAIKQL-KAGSGQGEREFQAEIE 250
++ N + LG G FG V++G ++ VA+K L + S Q E +F E
Sbjct: 26 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 85
Query: 251 IISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------ 304
IIS+ +H+++V +G R ++ E + L+ L + RP + P+ +
Sbjct: 86 IISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLH 144
Query: 305 IALGSARGLAYLHEDCQPKIIHRDIKSANILLDD---SFEAKVADFGLAK 351
+A A G YL E+ IHRDI + N LL AK+ DFG+A+
Sbjct: 145 VARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 191
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 80/172 (46%), Gaps = 29/172 (16%)
Query: 210 LGQGGFGYV--------HKGVLTNGKVVAIKQLKAGSGQGE-REFQAEIEIISQV-HHRH 259
LG+G FG V K VA+K LK+ + + + + +E+E++ + H++
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 260 LVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWP--------------TRMKI 305
+++L+G CT ++ E+ L +L + P + + +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 306 ALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK--HSLD 355
A ARG+ YL K IHRD+ + N+L+ + K+ADFGLA+ H +D
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 204
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 80/170 (47%), Gaps = 20/170 (11%)
Query: 198 KIATDNFSEANLLGQGGFGYVHKGVLTNGK------VVAIKQL-KAGSGQGEREFQAEIE 250
++ N + LG G FG V++G ++ VA+K L + S Q E +F E
Sbjct: 18 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 77
Query: 251 IISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------ 304
IIS+ +H+++V +G R ++ E + L+ L + RP + P+ +
Sbjct: 78 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLH 136
Query: 305 IALGSARGLAYLHEDCQPKIIHRDIKSANILLDD---SFEAKVADFGLAK 351
+A A G YL E+ IHRDI + N LL AK+ DFG+A+
Sbjct: 137 VARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 183
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 85/184 (46%), Gaps = 24/184 (13%)
Query: 198 KIATDNFSEANLLGQGGFGYVHK-----GVLTNGKVVAIKQLKAG----SGQGEREFQAE 248
KI + F +LG+GG+G V + G T GK+ A+K LK + + +AE
Sbjct: 13 KIRPECFELLRVLGKGGYGKVFQVRKVTGANT-GKIFAMKVLKKAMIVRNAKDTAHTKAE 71
Query: 249 IEIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGK----DRPVMNWPTRMK 304
I+ +V H +V L+ G + L+ E++ L L + + + +
Sbjct: 72 RNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEIS 131
Query: 305 IALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTHVSTRV 364
+ALG +LH Q II+RD+K NI+L+ K+ DFGL K S+ D V+
Sbjct: 132 MALG------HLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIH-DGTVTHXF 181
Query: 365 MGTF 368
GT
Sbjct: 182 CGTI 185
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 82/178 (46%), Gaps = 23/178 (12%)
Query: 198 KIATDNFSEANLLGQGGFGYVHK-----GVLTNGKVVAIKQLKAG----SGQGEREFQAE 248
KI + F +LG+GG+G V + G T GK+ A+K LK + + +AE
Sbjct: 13 KIRPECFELLRVLGKGGYGKVFQVRKVTGANT-GKIFAMKVLKKAMIVRNAKDTAHTKAE 71
Query: 249 IEIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGK----DRPVMNWPTRMK 304
I+ +V H +V L+ G + L+ E++ L L + + + +
Sbjct: 72 RNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEIS 131
Query: 305 IALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTHVST 362
+ALG +LH Q II+RD+K NI+L+ K+ DFGL K S+ T T
Sbjct: 132 MALG------HLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHT 180
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 80/170 (47%), Gaps = 20/170 (11%)
Query: 198 KIATDNFSEANLLGQGGFGYVHKGVLTNG------KVVAIKQL-KAGSGQGEREFQAEIE 250
++ N + LG G FG V++G ++ VA+K L + S Q E +F E
Sbjct: 53 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 112
Query: 251 IISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------ 304
IIS+ +H+++V +G R ++ E + L+ L + RP + P+ +
Sbjct: 113 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLH 171
Query: 305 IALGSARGLAYLHEDCQPKIIHRDIKSANILLDD---SFEAKVADFGLAK 351
+A A G YL E+ IHRDI + N LL AK+ DFG+A+
Sbjct: 172 VARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 218
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 86/184 (46%), Gaps = 29/184 (15%)
Query: 202 DNFSEANLLGQGGFGYVHK----GVLTN--GKVVAIKQLKAGSGQGERE-FQAEIEIISQ 254
+ S LG G FG V + G++ + VA+K LK + ERE +E++++S
Sbjct: 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82
Query: 255 V-HHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKI-------- 305
+ +H ++V+L+G CT G L++ E+ L L K + T I
Sbjct: 83 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 142
Query: 306 --------ALGSARGLAYL-HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDT 356
+ A+G+A+L ++C IHRD+ + NILL K+ DFGLA+ +
Sbjct: 143 DLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARDIKND 198
Query: 357 DTHV 360
+V
Sbjct: 199 SNYV 202
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 80/170 (47%), Gaps = 20/170 (11%)
Query: 198 KIATDNFSEANLLGQGGFGYVHKGVLTNG------KVVAIKQL-KAGSGQGEREFQAEIE 250
++ N + LG G FG V++G ++ VA+K L + S Q E +F E
Sbjct: 27 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 86
Query: 251 IISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------ 304
IIS+ +H+++V +G R ++ E + L+ L + RP + P+ +
Sbjct: 87 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLH 145
Query: 305 IALGSARGLAYLHEDCQPKIIHRDIKSANILLDD---SFEAKVADFGLAK 351
+A A G YL E+ IHRDI + N LL AK+ DFG+A+
Sbjct: 146 VARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQ 192
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 10/152 (6%)
Query: 203 NFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKA---GSGQGEREFQAEIEIISQVHHR 258
N+ LG+G FG V T G+ VA+K + + + EI + + H
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 68
Query: 259 HLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHE 318
H++ L + ++V E+ N+ ++ + +D+ R + SA + Y H
Sbjct: 69 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQ-RDKMSEQEARRFFQQIISA--VEYCH- 124
Query: 319 DCQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
+ KI+HRD+K N+LLD+ K+ADFGL+
Sbjct: 125 --RHKIVHRDLKPENLLLDEHLNVKIADFGLS 154
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 86/184 (46%), Gaps = 29/184 (15%)
Query: 202 DNFSEANLLGQGGFGYVHK----GVLTN--GKVVAIKQLKAGSGQGERE-FQAEIEIISQ 254
+ S LG G FG V + G++ + VA+K LK + ERE +E++++S
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 255 V-HHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKI-------- 305
+ +H ++V+L+G CT G L++ E+ L L K + T I
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 165
Query: 306 --------ALGSARGLAYL-HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDT 356
+ A+G+A+L ++C IHRD+ + NILL K+ DFGLA+ +
Sbjct: 166 DLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARDIKND 221
Query: 357 DTHV 360
+V
Sbjct: 222 SNYV 225
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 86/184 (46%), Gaps = 29/184 (15%)
Query: 202 DNFSEANLLGQGGFGYVHK----GVLTN--GKVVAIKQLKAGSGQGERE-FQAEIEIISQ 254
+ S LG G FG V + G++ + VA+K LK + ERE +E++++S
Sbjct: 39 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 98
Query: 255 V-HHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKI-------- 305
+ +H ++V+L+G CT G L++ E+ L L K + T I
Sbjct: 99 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 158
Query: 306 --------ALGSARGLAYL-HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDT 356
+ A+G+A+L ++C IHRD+ + NILL K+ DFGLA+ +
Sbjct: 159 DLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARDIKND 214
Query: 357 DTHV 360
+V
Sbjct: 215 SNYV 218
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 80/150 (53%), Gaps = 17/150 (11%)
Query: 210 LGQGGFGYVHKGV-LTNGKVVAIKQLK---AGSGQGEREFQAEIEIISQVH-HRHLVSLV 264
LG+G +G V K + G+VVA+K++ S +R F+ EI I++++ H ++V+L+
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFR-EIMILTELSGHENIVNLL 75
Query: 265 GYCTFGSQR--LLVYEFVPNKTLEFHLHGKDRPVMNWPT-RMKIALGSARGLAYLHEDCQ 321
+ R LV+++ +E LH R + P + + + + YLH
Sbjct: 76 NVLRADNDRDVYLVFDY-----METDLHAVIRANILEPVHKQYVVYQLIKVIKYLH---S 127
Query: 322 PKIIHRDIKSANILLDDSFEAKVADFGLAK 351
++HRD+K +NILL+ KVADFGL++
Sbjct: 128 GGLLHRDMKPSNILLNAECHVKVADFGLSR 157
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 81/155 (52%), Gaps = 7/155 (4%)
Query: 200 ATDNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQA--EIEIISQVH 256
+ +NF + +G+G +G V+K G+VVA+K+++ + A EI ++ +++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 257 HRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYL 316
H ++V L+ ++ LV+E V ++ L+ + + P +GLA+
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEHV-DQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 317 HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
H +++HRD+K N+L++ K+ADFGLA+
Sbjct: 123 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 10/152 (6%)
Query: 203 NFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKA---GSGQGEREFQAEIEIISQVHHR 258
N+ LG+G FG V T G+ VA+K + + + EI + + H
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 64
Query: 259 HLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHE 318
H++ L + ++V E+ N+ ++ + +D+ R + SA + Y H
Sbjct: 65 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQ-RDKMSEQEARRFFQQIISA--VEYCH- 120
Query: 319 DCQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
+ KI+HRD+K N+LLD+ K+ADFGL+
Sbjct: 121 --RHKIVHRDLKPENLLLDEHLNVKIADFGLS 150
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 90/210 (42%), Gaps = 22/210 (10%)
Query: 148 PTAPLPTVPVSAFNEPLSTSGSLDSDKPFPRQSPGMPVGNFKSTFTYEELKIATDNFSEA 207
P+ PL + + +PL+ + + P+ K +E+L +
Sbjct: 76 PSIPLLIDHLLSTQQPLTKKSGVVLHRAVPKD---------KWVLNHEDLVLGEQ----- 121
Query: 208 NLLGQGGFGYVHKGVL-TNGKVVAIKQLKAGSG-QGEREFQAEIEIISQVHHRHLVSLVG 265
+G+G FG V G L + +VA+K + + +F E I+ Q H ++V L+G
Sbjct: 122 --IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 266 YCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQPKII 325
CT +V E V L + + T +++ +A G+ YL C I
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLR-TEGARLRVKTLLQMVGDAAAGMEYLESKC---CI 235
Query: 326 HRDIKSANILLDDSFEAKVADFGLAKHSLD 355
HRD+ + N L+ + K++DFG+++ D
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSREEAD 265
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 88/170 (51%), Gaps = 14/170 (8%)
Query: 192 FTYEELKIATDNFSEANLLGQGGFGYVHKGVLT-NGKVVAIKQLKAGSGQGE-REFQAEI 249
FT E+LK + +G+G +G V+K V +G+++A+K++++ + E ++ ++
Sbjct: 19 FTAEDLK-------DLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDL 71
Query: 250 EIISQVHHR-HLVSLVGYCTFGSQRLLVYEFVPNKTLEFH--LHGKDRPVMNWPTRMKIA 306
+++ + ++V G + E + +F+ ++ V+ KI
Sbjct: 72 DVVMRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKIT 131
Query: 307 LGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDT 356
L + + L +L E+ KIIHRDIK +NILLD S K+ DFG++ +D+
Sbjct: 132 LATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDS 179
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 90/210 (42%), Gaps = 22/210 (10%)
Query: 148 PTAPLPTVPVSAFNEPLSTSGSLDSDKPFPRQSPGMPVGNFKSTFTYEELKIATDNFSEA 207
P+ PL + + +PL+ + + P+ K +E+L +
Sbjct: 76 PSIPLLIDHLLSTQQPLTKKSGVVLHRAVPKD---------KWVLNHEDLVLGEQ----- 121
Query: 208 NLLGQGGFGYVHKGVL-TNGKVVAIKQLKAGSG-QGEREFQAEIEIISQVHHRHLVSLVG 265
+G+G FG V G L + +VA+K + + +F E I+ Q H ++V L+G
Sbjct: 122 --IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 266 YCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQPKII 325
CT +V E V L + + T +++ +A G+ YL C I
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLR-TEGARLRVKTLLQMVGDAAAGMEYLESKC---CI 235
Query: 326 HRDIKSANILLDDSFEAKVADFGLAKHSLD 355
HRD+ + N L+ + K++DFG+++ D
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSREEAD 265
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 10/152 (6%)
Query: 203 NFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKA---GSGQGEREFQAEIEIISQVHHR 258
N+ LG+G FG V T G+ VA+K + + + EI + + H
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 74
Query: 259 HLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHE 318
H++ L + ++V E+ N+ ++ + +D+ R + SA + Y H
Sbjct: 75 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQ-RDKMSEQEARRFFQQIISA--VEYCH- 130
Query: 319 DCQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
+ KI+HRD+K N+LLD+ K+ADFGL+
Sbjct: 131 --RHKIVHRDLKPENLLLDEHLNVKIADFGLS 160
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 10/152 (6%)
Query: 203 NFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKA---GSGQGEREFQAEIEIISQVHHR 258
N+ LG+G FG V T G+ VA+K + + + EI + + H
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 73
Query: 259 HLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHE 318
H++ L + ++V E+ N+ ++ + +D+ R + SA + Y H
Sbjct: 74 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQ-RDKMSEQEARRFFQQIISA--VEYCH- 129
Query: 319 DCQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
+ KI+HRD+K N+LLD+ K+ADFGL+
Sbjct: 130 --RHKIVHRDLKPENLLLDEHLNVKIADFGLS 159
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 81/185 (43%), Gaps = 27/185 (14%)
Query: 202 DNFSEANLLGQGGFGYV--------HKGVLTNGKVVAIKQLKAGSGQGE-REFQAEIEII 252
D + LG+G FG V K VA+K LK + + + + +E+E++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 253 SQV-HHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------- 304
+ H+++++L+G CT ++ + L +L + P M + +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 305 -------IALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTD 357
ARG+ YL K IHRD+ + N+L+ ++ K+ADFGLA+ + D
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 358 THVST 362
+ T
Sbjct: 212 YYKKT 216
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 86/184 (46%), Gaps = 29/184 (15%)
Query: 202 DNFSEANLLGQGGFGYVHK----GVLTN--GKVVAIKQLKAGSGQGERE-FQAEIEIISQ 254
+ S LG G FG V + G++ + VA+K LK + ERE +E++++S
Sbjct: 41 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 100
Query: 255 V-HHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKI-------- 305
+ +H ++V+L+G CT G L++ E+ L L K + T I
Sbjct: 101 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 160
Query: 306 --------ALGSARGLAYL-HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDT 356
+ A+G+A+L ++C IHRD+ + NILL K+ DFGLA+ +
Sbjct: 161 DLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARDIKND 216
Query: 357 DTHV 360
+V
Sbjct: 217 SNYV 220
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 73/154 (47%), Gaps = 15/154 (9%)
Query: 204 FSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQ---AEIEIISQVHHRH 259
FS+ +G G FG V+ + N +VVAIK++ Q ++Q E+ + ++ H +
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 260 LVSLVGYCTFGSQRLLVYEFV---PNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYL 316
+ G LV E+ + LE H +P+ + G+ +GLAYL
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVH----KKPLQEVEI-AAVTHGALQGLAYL 131
Query: 317 HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
H +IHRD+K+ NILL + K+ DFG A
Sbjct: 132 HSH---NMIHRDVKAGNILLSEPGLVKLGDFGSA 162
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 81/153 (52%), Gaps = 7/153 (4%)
Query: 202 DNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQA--EIEIISQVHHR 258
+NF + +G+G +G V+K G+VVA+K+++ + A EI ++ +++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 259 HLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHE 318
++V L+ ++ LV+EF+ ++ L+ + + P +GL++ H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHS 121
Query: 319 DCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+++HRD+K N+L++ K+ADFGLA+
Sbjct: 122 H---RVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 79/172 (45%), Gaps = 19/172 (11%)
Query: 206 EANLLGQGGFGYVHKGVL-----TNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHL 260
E LG G FG V KG V I + +A + E AE ++ Q+ + ++
Sbjct: 374 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 433
Query: 261 VSLVGYCTFGSQRLLVYEFVP----NKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYL 316
V ++G C S +LV E NK L+ + H KD+ ++ ++ + G+ YL
Sbjct: 434 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSM------GMKYL 486
Query: 317 HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTHVSTRVMGTF 368
E +HRD+ + N+LL AK++DFGL+K + + + G +
Sbjct: 487 EES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 535
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 76/154 (49%), Gaps = 16/154 (10%)
Query: 210 LGQGGFGYVHKG--VLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVH-----HRHLVS 262
+G+G +G V K + G+ VA+K+++ +G+ E+ H H ++V
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 263 LVGYCTFG-----SQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLH 317
L CT ++ LV+E V ++ L +L P + T + RGL +LH
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH 137
Query: 318 EDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+++HRD+K NIL+ S + K+ADFGLA+
Sbjct: 138 SH---RVVHRDLKPQNILVTSSGQIKLADFGLAR 168
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 80/170 (47%), Gaps = 20/170 (11%)
Query: 198 KIATDNFSEANLLGQGGFGYVHKGVLTNGK------VVAIKQL-KAGSGQGEREFQAEIE 250
++ N + LG G FG V++G ++ VA+K L + S Q E +F E
Sbjct: 41 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEAL 100
Query: 251 IISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------ 304
IIS+ +H+++V +G R ++ E + L+ L + RP + P+ +
Sbjct: 101 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLH 159
Query: 305 IALGSARGLAYLHEDCQPKIIHRDIKSANILLDD---SFEAKVADFGLAK 351
+A A G YL E+ IHRDI + N LL AK+ DFG+A+
Sbjct: 160 VARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 79/172 (45%), Gaps = 19/172 (11%)
Query: 206 EANLLGQGGFGYVHKGVL-----TNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHL 260
E LG G FG V KG V I + +A + E AE ++ Q+ + ++
Sbjct: 373 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 432
Query: 261 VSLVGYCTFGSQRLLVYEFVP----NKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYL 316
V ++G C S +LV E NK L+ + H KD+ ++ ++ + G+ YL
Sbjct: 433 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSM------GMKYL 485
Query: 317 HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTHVSTRVMGTF 368
E +HRD+ + N+LL AK++DFGL+K + + + G +
Sbjct: 486 EES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 534
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 87/182 (47%), Gaps = 33/182 (18%)
Query: 197 LKIATDNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQAEIEIISQV 255
L+ A+D F E +LGQG FG V K + + AIK+++ + + +E+ +++ +
Sbjct: 2 LRYASD-FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASL 59
Query: 256 HHRHLVSLVGYCTFGSQRLLV---------------YEFVPNKTLEFHLHGKDRPVMN-- 298
+H+++V Y + +R V E+ N+TL +H ++
Sbjct: 60 NHQYVVRY--YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDE 117
Query: 299 -WPTRMKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKH---SL 354
W +I L+Y+H IIHRD+K NI +D+S K+ DFGLAK+ SL
Sbjct: 118 YWRLFRQIL----EALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSL 170
Query: 355 DT 356
D
Sbjct: 171 DI 172
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 78/168 (46%), Gaps = 19/168 (11%)
Query: 210 LGQGGFGYVHKGVL-----TNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLV 264
LG G FG V KG V I + +A + E AE ++ Q+ + ++V ++
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 265 GYCTFGSQRLLVYEFVP----NKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDC 320
G C S +LV E NK L+ + H KD+ ++ ++ + G+ YL E
Sbjct: 95 GICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNII------ELVHQVSMGMKYLEE-- 145
Query: 321 QPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTHVSTRVMGTF 368
+HRD+ + N+LL AK++DFGL+K + + + G +
Sbjct: 146 -SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 192
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 78/168 (46%), Gaps = 19/168 (11%)
Query: 210 LGQGGFGYVHKGVL-----TNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLV 264
LG G FG V KG V I + +A + E AE ++ Q+ + ++V ++
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 265 GYCTFGSQRLLVYEFVP----NKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDC 320
G C S +LV E NK L+ + H KD+ ++ ++ + G+ YL E
Sbjct: 95 GICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNII------ELVHQVSMGMKYLEE-- 145
Query: 321 QPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTHVSTRVMGTF 368
+HRD+ + N+LL AK++DFGL+K + + + G +
Sbjct: 146 -SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 192
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 80/153 (52%), Gaps = 7/153 (4%)
Query: 202 DNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQA--EIEIISQVHHR 258
+NF + +G+G +G V+K G+VVA+K+++ + A EI ++ +++H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 259 HLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHE 318
++V L+ ++ LV+E V ++ L+ + + P +GLA+ H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHV-HQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 319 DCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+++HRD+K N+L++ K+ADFGLA+
Sbjct: 121 H---RVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 78/168 (46%), Gaps = 19/168 (11%)
Query: 210 LGQGGFGYVHKGVL-----TNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLV 264
LG G FG V KG V I + +A + E AE ++ Q+ + ++V ++
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 92
Query: 265 GYCTFGSQRLLVYEFVP----NKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDC 320
G C S +LV E NK L+ + H KD+ ++ ++ + G+ YL E
Sbjct: 93 GICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNII------ELVHQVSMGMKYLEE-- 143
Query: 321 QPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTHVSTRVMGTF 368
+HRD+ + N+LL AK++DFGL+K + + + G +
Sbjct: 144 -SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 190
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 81/185 (43%), Gaps = 27/185 (14%)
Query: 202 DNFSEANLLGQGGFGYV--------HKGVLTNGKVVAIKQLKAGSGQGE-REFQAEIEII 252
D + LG+G FG V K VA+K LK + + + + +E+E++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 253 SQV-HHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------- 304
+ H+++++L+G CT ++ + L +L + P M + +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 305 -------IALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTD 357
ARG+ YL K IHRD+ + N+L+ ++ K+ADFGLA+ + D
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 358 THVST 362
+ T
Sbjct: 212 YYKKT 216
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 74/148 (50%), Gaps = 14/148 (9%)
Query: 198 KIATDNFSEANLLGQGGFGYVHKGV---------LTNGKVVAIKQLKAGSGQGEREFQAE 248
KI ++ LGQG F + KGV L +V+ KA E F+A
Sbjct: 4 KIRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAA 63
Query: 249 IEIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALG 308
++S++ H+HLV G C G + +LV EFV +L+ +L K++ +N ++++A
Sbjct: 64 -SMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLK-KNKNCINILWKLEVAKQ 121
Query: 309 SARGLAYLHEDCQPKIIHRDIKSANILL 336
A + +L E+ +IH ++ + NILL
Sbjct: 122 LAAAMHFLEEN---TLIHGNVCAKNILL 146
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 66/148 (44%), Gaps = 13/148 (8%)
Query: 209 LLGQGGFGYVHK------GVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVS 262
LG+GGF + + GK+V K L Q E+ EI I + H+H+V
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVP-KSLLLKPHQREK-MSMEISIHRSLAHQHVVG 105
Query: 263 LVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQP 322
G+ +V E ++L LH K R + P G YLH +
Sbjct: 106 FHGFFEDNDFVFVVLELCRRRSL-LELH-KRRKALTEPEARYYLRQIVLGCQYLHRN--- 160
Query: 323 KIIHRDIKSANILLDDSFEAKVADFGLA 350
++IHRD+K N+ L++ E K+ DFGLA
Sbjct: 161 RVIHRDLKLGNLFLNEDLEVKIGDFGLA 188
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 70/154 (45%), Gaps = 13/154 (8%)
Query: 203 NFSEANLLGQGGFGYVHKGV------LTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVH 256
+ LG+GGF ++ + GKVV K + Q E+ EI I +
Sbjct: 43 RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVP-KSMLLKPHQKEK-MSTEIAIHKSLD 100
Query: 257 HRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYL 316
+ H+V G+ +V E ++L LH K R + P + +G+ YL
Sbjct: 101 NPHVVGFHGFFEDDDFVYVVLEICRRRSL-LELH-KRRKAVTEPEARYFMRQTIQGVQYL 158
Query: 317 HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
H + ++IHRD+K N+ L+D + K+ DFGLA
Sbjct: 159 HNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLA 189
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 80/153 (52%), Gaps = 7/153 (4%)
Query: 202 DNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQA--EIEIISQVHHR 258
+NF + +G+G +G V+K G+VVA+ +++ + A EI ++ +++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 259 HLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHE 318
++V L+ ++ LV+EF+ ++ L+ + + P +GLA+ H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 319 DCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+++HRD+K N+L++ K+ADFGLA+
Sbjct: 122 H---RVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 80/153 (52%), Gaps = 7/153 (4%)
Query: 202 DNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQA--EIEIISQVHHR 258
+NF + +G+G +G V+K G+VVA+ +++ + A EI ++ +++H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 259 HLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHE 318
++V L+ ++ LV+EF+ ++ L+ + + P +GLA+ H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 319 DCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+++HRD+K N+L++ K+ADFGLA+
Sbjct: 121 H---RVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 66/148 (44%), Gaps = 13/148 (8%)
Query: 209 LLGQGGFGYVHK------GVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVS 262
LG+GGF + + GK+V K L Q E+ EI I + H+H+V
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVP-KSLLLKPHQREK-MSMEISIHRSLAHQHVVG 85
Query: 263 LVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQP 322
G+ +V E ++L LH K R + P G YLH +
Sbjct: 86 FHGFFEDNDFVFVVLELCRRRSL-LELH-KRRKALTEPEARYYLRQIVLGCQYLHRN--- 140
Query: 323 KIIHRDIKSANILLDDSFEAKVADFGLA 350
++IHRD+K N+ L++ E K+ DFGLA
Sbjct: 141 RVIHRDLKLGNLFLNEDLEVKIGDFGLA 168
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 66/148 (44%), Gaps = 13/148 (8%)
Query: 209 LLGQGGFGYVHK------GVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVS 262
LG+GGF + + GK+V K L Q E+ EI I + H+H+V
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVP-KSLLLKPHQREK-MSMEISIHRSLAHQHVVG 103
Query: 263 LVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQP 322
G+ +V E ++L LH K R + P G YLH +
Sbjct: 104 FHGFFEDNDFVFVVLELCRRRSL-LELH-KRRKALTEPEARYYLRQIVLGCQYLHRN--- 158
Query: 323 KIIHRDIKSANILLDDSFEAKVADFGLA 350
++IHRD+K N+ L++ E K+ DFGLA
Sbjct: 159 RVIHRDLKLGNLFLNEDLEVKIGDFGLA 186
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 66/148 (44%), Gaps = 13/148 (8%)
Query: 209 LLGQGGFGYVHK------GVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVS 262
LG+GGF + + GK+V K L Q E+ EI I + H+H+V
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVP-KSLLLKPHQREK-MSMEISIHRSLAHQHVVG 81
Query: 263 LVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQP 322
G+ +V E ++L LH K R + P G YLH +
Sbjct: 82 FHGFFEDNDFVFVVLELCRRRSL-LELH-KRRKALTEPEARYYLRQIVLGCQYLHRN--- 136
Query: 323 KIIHRDIKSANILLDDSFEAKVADFGLA 350
++IHRD+K N+ L++ E K+ DFGLA
Sbjct: 137 RVIHRDLKLGNLFLNEDLEVKIGDFGLA 164
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 66/148 (44%), Gaps = 13/148 (8%)
Query: 209 LLGQGGFGYVHK------GVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVS 262
LG+GGF + + GK+V K L Q E+ EI I + H+H+V
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVP-KSLLLKPHQREK-MSMEISIHRSLAHQHVVG 81
Query: 263 LVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQP 322
G+ +V E ++L LH K R + P G YLH +
Sbjct: 82 FHGFFEDNDFVFVVLELCRRRSL-LELH-KRRKALTEPEARYYLRQIVLGCQYLHRN--- 136
Query: 323 KIIHRDIKSANILLDDSFEAKVADFGLA 350
++IHRD+K N+ L++ E K+ DFGLA
Sbjct: 137 RVIHRDLKLGNLFLNEDLEVKIGDFGLA 164
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 70/154 (45%), Gaps = 13/154 (8%)
Query: 203 NFSEANLLGQGGFGYVHKGV------LTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVH 256
+ LG+GGF ++ + GKVV K + Q E+ EI I +
Sbjct: 43 RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVP-KSMLLKPHQKEK-MSTEIAIHKSLD 100
Query: 257 HRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYL 316
+ H+V G+ +V E ++L LH K R + P + +G+ YL
Sbjct: 101 NPHVVGFHGFFEDDDFVYVVLEICRRRSL-LELH-KRRKAVTEPEARYFMRQTIQGVQYL 158
Query: 317 HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
H + ++IHRD+K N+ L+D + K+ DFGLA
Sbjct: 159 HNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLA 189
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 78/168 (46%), Gaps = 19/168 (11%)
Query: 210 LGQGGFGYVHKGVL-----TNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLV 264
LG G FG V KG V I + +A + E AE ++ Q+ + ++V ++
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 265 GYCTFGSQRLLVYEFVP----NKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDC 320
G C S +LV E NK L+ + H KD+ ++ ++ + G+ YL E
Sbjct: 79 GICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNII------ELVHQVSMGMKYLEE-- 129
Query: 321 QPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTHVSTRVMGTF 368
+HRD+ + N+LL AK++DFGL+K + + + G +
Sbjct: 130 -SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 176
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 70/154 (45%), Gaps = 13/154 (8%)
Query: 203 NFSEANLLGQGGFGYVHKGV------LTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVH 256
+ LG+GGF ++ + GKVV K + Q E+ EI I +
Sbjct: 43 RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVP-KSMLLKPHQKEK-MSTEIAIHKSLD 100
Query: 257 HRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYL 316
+ H+V G+ +V E ++L LH K R + P + +G+ YL
Sbjct: 101 NPHVVGFHGFFEDDDFVYVVLEICRRRSL-LELH-KRRKAVTEPEARYFMRQTIQGVQYL 158
Query: 317 HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
H + ++IHRD+K N+ L+D + K+ DFGLA
Sbjct: 159 HNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLA 189
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 76/154 (49%), Gaps = 16/154 (10%)
Query: 210 LGQGGFGYVHKG--VLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVH-----HRHLVS 262
+G+G +G V K + G+ VA+K+++ +G+ E+ H H ++V
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 263 LVGYCTFG-----SQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLH 317
L CT ++ LV+E V ++ L +L P + T + RGL +LH
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH 137
Query: 318 EDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+++HRD+K NIL+ S + K+ADFGLA+
Sbjct: 138 SH---RVVHRDLKPQNILVTSSGQIKLADFGLAR 168
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 70/154 (45%), Gaps = 13/154 (8%)
Query: 203 NFSEANLLGQGGFGYVHKGVLTN------GKVVAIKQLKAGSGQGEREFQAEIEIISQVH 256
+ LG+GGF ++ + GKVV K + Q E+ EI I +
Sbjct: 27 RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVP-KSMLLKPHQKEK-MSTEIAIHKSLD 84
Query: 257 HRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYL 316
+ H+V G+ +V E ++L LH K R + P + +G+ YL
Sbjct: 85 NPHVVGFHGFFEDDDFVYVVLEICRRRSL-LELH-KRRKAVTEPEARYFMRQTIQGVQYL 142
Query: 317 HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
H + ++IHRD+K N+ L+D + K+ DFGLA
Sbjct: 143 HNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLA 173
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 19/151 (12%)
Query: 210 LGQGGFGYVHKGVL-----TNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLV 264
LG G FG V KG V I + +A + E AE ++ Q+ + ++V ++
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 265 GYCTFGSQRLLVYEFVP----NKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDC 320
G C S +LV E NK L+ + H KD+ ++ ++ + G+ YL E
Sbjct: 79 GICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNII------ELVHQVSMGMKYLEE-- 129
Query: 321 QPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+HRD+ + N+LL AK++DFGL+K
Sbjct: 130 -SNFVHRDLAARNVLLVTQHYAKISDFGLSK 159
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 78/168 (46%), Gaps = 19/168 (11%)
Query: 210 LGQGGFGYVHKGVL-----TNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLV 264
LG G FG V KG V I + +A + E AE ++ Q+ + ++V ++
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84
Query: 265 GYCTFGSQRLLVYEFVP----NKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDC 320
G C S +LV E NK L+ + H KD+ ++ ++ + G+ YL E
Sbjct: 85 GICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNII------ELVHQVSMGMKYLEE-- 135
Query: 321 QPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTHVSTRVMGTF 368
+HRD+ + N+LL AK++DFGL+K + + + G +
Sbjct: 136 -SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 182
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 76/154 (49%), Gaps = 16/154 (10%)
Query: 210 LGQGGFGYVHKG--VLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVH-----HRHLVS 262
+G+G +G V K + G+ VA+K+++ +G+ E+ H H ++V
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 263 LVGYCTFG-----SQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLH 317
L CT ++ LV+E V ++ L +L P + T + RGL +LH
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH 137
Query: 318 EDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+++HRD+K NIL+ S + K+ADFGLA+
Sbjct: 138 SH---RVVHRDLKPQNILVTSSGQIKLADFGLAR 168
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 19/151 (12%)
Query: 210 LGQGGFGYVHKGVL-----TNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLV 264
LG G FG V KG V I + +A + E AE ++ Q+ + ++V ++
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 265 GYCTFGSQRLLVYEFVP----NKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDC 320
G C S +LV E NK L+ + H KD+ ++ ++ + G+ YL E
Sbjct: 75 GICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNII------ELVHQVSMGMKYLEE-- 125
Query: 321 QPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+HRD+ + N+LL AK++DFGL+K
Sbjct: 126 -SNFVHRDLAARNVLLVTQHYAKISDFGLSK 155
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 78/168 (46%), Gaps = 19/168 (11%)
Query: 210 LGQGGFGYVHKGVL-----TNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLV 264
LG G FG V KG V I + +A + E AE ++ Q+ + ++V ++
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 265 GYCTFGSQRLLVYEFVP----NKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDC 320
G C S +LV E NK L+ + H KD+ ++ ++ + G+ YL E
Sbjct: 73 GICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNII------ELVHQVSMGMKYLEE-- 123
Query: 321 QPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTHVSTRVMGTF 368
+HRD+ + N+LL AK++DFGL+K + + + G +
Sbjct: 124 -SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 170
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 78/164 (47%), Gaps = 15/164 (9%)
Query: 199 IATDNFSEANLLGQGGFGYVHKGVL-TNGKVVAIKQLKAGSGQGEREFQAEIEI-----I 252
+AT + +G G +G V+K +G VA+K ++ +G+ E+ +
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 253 SQVHHRHLVSLVGYC-TFGSQR----LLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIAL 307
H ++V L+ C T + R LV+E V ++ L +L P + T +
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMR 119
Query: 308 GSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
RGL +LH +C I+HRD+K NIL+ K+ADFGLA+
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR 160
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 15/164 (9%)
Query: 199 IATDNFSEANLLGQGGFGYVHKGVL-TNGKVVAIKQLKAGSGQGEREFQAEIEI-----I 252
+AT + +G G +G V+K +G VA+K ++ +G+ E+ +
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 253 SQVHHRHLVSLVGYCTFGS-----QRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIAL 307
H ++V L+ C + LV+E V ++ L +L P + T +
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMR 119
Query: 308 GSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
RGL +LH +C I+HRD+K NIL+ K+ADFGLA+
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR 160
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 78/164 (47%), Gaps = 15/164 (9%)
Query: 199 IATDNFSEANLLGQGGFGYVHKGVL-TNGKVVAIKQLKAGSGQGEREFQAEIEI-----I 252
+AT + +G G +G V+K +G VA+K ++ +G+ E+ +
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 253 SQVHHRHLVSLVGYC-TFGSQR----LLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIAL 307
H ++V L+ C T + R LV+E V ++ L +L P + T +
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMR 119
Query: 308 GSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
RGL +LH +C I+HRD+K NIL+ K+ADFGLA+
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR 160
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 85/176 (48%), Gaps = 20/176 (11%)
Query: 198 KIATDNFSEANLLGQGGFGYVHK------GVLTNGKVVAIKQLKAGSGQGEREFQAEIEI 251
++ D+F + LG G G V K G++ K++ ++ A Q RE Q +
Sbjct: 12 ELKDDDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQ----V 67
Query: 252 ISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRM--KIALGS 309
+ + + ++V G + + E + +L+ L R P + K+++
Sbjct: 68 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKR----IPEEILGKVSIAV 123
Query: 310 ARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDT--DTHVSTR 363
RGLAYL E Q I+HRD+K +NIL++ E K+ DFG++ +D+ ++ V TR
Sbjct: 124 LRGLAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR 177
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 74/148 (50%), Gaps = 14/148 (9%)
Query: 198 KIATDNFSEANLLGQGGFGYVHKGV---------LTNGKVVAIKQLKAGSGQGEREFQAE 248
KI ++ LGQG F + KGV L +V+ KA E F+A
Sbjct: 4 KIRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAA 63
Query: 249 IEIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALG 308
++S++ H+HLV G C G + +LV EFV +L+ +L K++ +N ++++A
Sbjct: 64 -SMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLK-KNKNCINILWKLEVAKQ 121
Query: 309 SARGLAYLHEDCQPKIIHRDIKSANILL 336
A + +L E+ +IH ++ + NILL
Sbjct: 122 LAWAMHFLEEN---TLIHGNVCAKNILL 146
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 66/148 (44%), Gaps = 13/148 (8%)
Query: 209 LLGQGGFGYVHK------GVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVS 262
LG+GGF + + GK+V K L Q E+ EI I + H+H+V
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVP-KSLLLKPHQREK-MSMEISIHRSLAHQHVVG 79
Query: 263 LVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQP 322
G+ +V E ++L LH K R + P G YLH +
Sbjct: 80 FHGFFEDNDFVFVVLELCRRRSL-LELH-KRRKALTEPEARYYLRQIVLGCQYLHRN--- 134
Query: 323 KIIHRDIKSANILLDDSFEAKVADFGLA 350
++IHRD+K N+ L++ E K+ DFGLA
Sbjct: 135 RVIHRDLKLGNLFLNEDLEVKIGDFGLA 162
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 75/156 (48%), Gaps = 8/156 (5%)
Query: 210 LGQGGFGYVHKGV-LTNGKVVAIKQLKAGS-GQGEREFQAEIEIISQVHHRHLVSLVGYC 267
+G GGF V + G++VAIK + + G + EIE + + H+H+ L
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVL 77
Query: 268 TFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHR 327
++ +V E+ P L ++ +DR + TR+ + +AY+H HR
Sbjct: 78 ETANKIFMVLEYCPGGELFDYIISQDR-LSEEETRV-VFRQIVSAVAYVHSQ---GYAHR 132
Query: 328 DIKSANILLDDSFEAKVADFGL-AKHSLDTDTHVST 362
D+K N+L D+ + K+ DFGL AK + D H+ T
Sbjct: 133 DLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQT 168
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 74/151 (49%), Gaps = 21/151 (13%)
Query: 210 LGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQA-------EIEIISQVHHRHLVS 262
+G+G +G V+K G+ A+K+++ E+E + EI I+ ++ H ++V
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRL-----EKEDEGIPSTTIREISILKELKHSNIVK 64
Query: 263 LVGYCTFGSQRLLVYEFVPN--KTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDC 320
L + +LV+E + K L G V T L G+AY H+
Sbjct: 65 LYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESV----TAKSFLLQLLNGIAYCHD-- 118
Query: 321 QPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+++HRD+K N+L++ E K+ADFGLA+
Sbjct: 119 -RRVLHRDLKPQNLLINREGELKIADFGLAR 148
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 87/181 (48%), Gaps = 33/181 (18%)
Query: 197 LKIATDNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQAEIEIISQV 255
L+ A+D F E +LGQG FG V K + + AIK+++ + + +E+ +++ +
Sbjct: 2 LRYASD-FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVXLLASL 59
Query: 256 HHRHLVSLVGYCTFGSQRLLV---------------YEFVPNKTLEFHLHGKDRPVMN-- 298
+H+++V Y + +R V E+ N+TL +H ++
Sbjct: 60 NHQYVVRY--YAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDE 117
Query: 299 -WPTRMKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKH---SL 354
W +I L+Y+H IIHR++K NI +D+S K+ DFGLAK+ SL
Sbjct: 118 YWRLFRQIL----EALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSL 170
Query: 355 D 355
D
Sbjct: 171 D 171
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 74/151 (49%), Gaps = 21/151 (13%)
Query: 210 LGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQA-------EIEIISQVHHRHLVS 262
+G+G +G V+K G+ A+K+++ E+E + EI I+ ++ H ++V
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRL-----EKEDEGIPSTTIREISILKELKHSNIVK 64
Query: 263 LVGYCTFGSQRLLVYEFVPN--KTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDC 320
L + +LV+E + K L G V T L G+AY H+
Sbjct: 65 LYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESV----TAKSFLLQLLNGIAYCHD-- 118
Query: 321 QPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+++HRD+K N+L++ E K+ADFGLA+
Sbjct: 119 -RRVLHRDLKPQNLLINREGELKIADFGLAR 148
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 74/160 (46%), Gaps = 11/160 (6%)
Query: 199 IATDNFSEANLLGQGGFGYVHKGVLT-NGKVVAIKQLKAGSGQGER-EFQAEIEIISQVH 256
I D++ ++G G V + VAIK++ Q E EI+ +SQ H
Sbjct: 12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCH 71
Query: 257 HRHLVSLVGYCTFGSQRLLVYEFVPN-KTLEFHLH----GKDRP-VMNWPTRMKIALGSA 310
H ++VS + LV + + L+ H G+ + V++ T I
Sbjct: 72 HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 131
Query: 311 RGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
GL YLH++ Q IHRD+K+ NILL + ++ADFG++
Sbjct: 132 EGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVS 168
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 74/151 (49%), Gaps = 21/151 (13%)
Query: 210 LGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQA-------EIEIISQVHHRHLVS 262
+G+G +G V+K G+ A+K+++ E+E + EI I+ ++ H ++V
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRL-----EKEDEGIPSTTIREISILKELKHSNIVK 64
Query: 263 LVGYCTFGSQRLLVYEFVPN--KTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDC 320
L + +LV+E + K L G V T L G+AY H+
Sbjct: 65 LYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESV----TAKSFLLQLLNGIAYCHD-- 118
Query: 321 QPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+++HRD+K N+L++ E K+ADFGLA+
Sbjct: 119 -RRVLHRDLKPQNLLINREGELKIADFGLAR 148
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 86/182 (47%), Gaps = 33/182 (18%)
Query: 197 LKIATDNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQAEIEIISQV 255
L+ A+D F E +LGQG FG V K + + AIK+++ + + +E+ +++ +
Sbjct: 2 LRYASD-FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASL 59
Query: 256 HHRHLVSLVGYCTFGSQRLLV---------------YEFVPNKTLEFHLHGKDRPVMN-- 298
+H+++V Y + +R V E+ N TL +H ++
Sbjct: 60 NHQYVVRY--YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDE 117
Query: 299 -WPTRMKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKH---SL 354
W +I L+Y+H IIHRD+K NI +D+S K+ DFGLAK+ SL
Sbjct: 118 YWRLFRQIL----EALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSL 170
Query: 355 DT 356
D
Sbjct: 171 DI 172
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 88/177 (49%), Gaps = 20/177 (11%)
Query: 197 LKIATDNFSEANLLGQGGFGYVHK------GVLTNGKVVAIKQLKAGSGQGEREFQAEIE 250
+++ D+F + + LG G G V K G++ K++ ++ A Q RE Q
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ---- 56
Query: 251 IISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRM--KIALG 308
++ + + ++V G + + E + +L+ L R P ++ K+++
Sbjct: 57 VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIA 112
Query: 309 SARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDT--DTHVSTR 363
+GL YL E + KI+HRD+K +NIL++ E K+ DFG++ +D+ ++ V TR
Sbjct: 113 VIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR 167
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 87/176 (49%), Gaps = 20/176 (11%)
Query: 198 KIATDNFSEANLLGQGGFGYVHK------GVLTNGKVVAIKQLKAGSGQGEREFQAEIEI 251
++ D+F + + LG G G V K G++ K++ ++ A Q RE Q +
Sbjct: 64 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ----V 119
Query: 252 ISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRM--KIALGS 309
+ + + ++V G + + E + +L+ L R P ++ K+++
Sbjct: 120 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIAV 175
Query: 310 ARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDT--DTHVSTR 363
+GL YL E + KI+HRD+K +NIL++ E K+ DFG++ +D+ ++ V TR
Sbjct: 176 IKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR 229
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 74/160 (46%), Gaps = 11/160 (6%)
Query: 199 IATDNFSEANLLGQGGFGYVHKGVLT-NGKVVAIKQLKAGSGQGER-EFQAEIEIISQVH 256
I D++ ++G G V + VAIK++ Q E EI+ +SQ H
Sbjct: 7 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCH 66
Query: 257 HRHLVSLVGYCTFGSQRLLVYEFVPN-KTLEFHLH----GKDRP-VMNWPTRMKIALGSA 310
H ++VS + LV + + L+ H G+ + V++ T I
Sbjct: 67 HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 126
Query: 311 RGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
GL YLH++ Q IHRD+K+ NILL + ++ADFG++
Sbjct: 127 EGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVS 163
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 77/152 (50%), Gaps = 11/152 (7%)
Query: 205 SEANLLGQGGFGYVHKGVLT-NGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSL 263
S+ +LG G FG VHK T G +A K +K + + E + EI +++Q+ H +L+ L
Sbjct: 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQL 151
Query: 264 VGYCTFGSQR--LLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQ 321
Y F S+ +LV E+V L + + + T + + G+ ++H Q
Sbjct: 152 --YDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMK-QICEGIRHMH---Q 205
Query: 322 PKIIHRDIKSANILL--DDSFEAKVADFGLAK 351
I+H D+K NIL D+ + K+ DFGLA+
Sbjct: 206 MYILHLDLKPENILCVNRDAKQIKIIDFGLAR 237
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 100/210 (47%), Gaps = 25/210 (11%)
Query: 155 VPVSAFNEPLSTSG---SLDSDKPFPRQSPGMPVGNFKSTFTYEELKIATDNFSEANLLG 211
+P AF +P ++S LDS + +GN + ++ D+ LG
Sbjct: 15 IPKEAFEQPQTSSTPPRDLDS-------KACISIGN-------QNFEVKADDLEPIMELG 60
Query: 212 QGGFGYVHKGV-LTNGKVVAIKQLKAG-SGQGEREFQAEIEI-ISQVHHRHLVSLVGYCT 268
+G +G V K + +G+++A+K+++A + Q ++ +++I + V V+ G
Sbjct: 61 RGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALF 120
Query: 269 FGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRM--KIALGSARGLAYLHEDCQPKIIH 326
+ E + +F+ D+ P + KIA+ + L +LH + +IH
Sbjct: 121 REGDVWICMELMDTSLDKFYKQVIDKG-QTIPEDILGKIAVSIVKALEHLHS--KLSVIH 177
Query: 327 RDIKSANILLDDSFEAKVADFGLAKHSLDT 356
RD+K +N+L++ + K+ DFG++ + +D+
Sbjct: 178 RDVKPSNVLINALGQVKMCDFGISGYLVDS 207
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 7/152 (4%)
Query: 202 DNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHL 260
D + LG G FG VH+ V G+V K + + + EI I++Q+HH L
Sbjct: 51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKL 110
Query: 261 VSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDC 320
++L + +L+ EF+ L + +D M+ + + GL ++HE
Sbjct: 111 INLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYK-MSEAEVINYMRQACEGLKHMHEHS 169
Query: 321 QPKIIHRDIKSANILLD--DSFEAKVADFGLA 350
I+H DIK NI+ + + K+ DFGLA
Sbjct: 170 ---IVHLDIKPENIMCETKKASSVKIIDFGLA 198
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 88/177 (49%), Gaps = 20/177 (11%)
Query: 197 LKIATDNFSEANLLGQGGFGYVHK------GVLTNGKVVAIKQLKAGSGQGEREFQAEIE 250
+++ D+F + + LG G G V K G++ K++ ++ A Q RE Q
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ---- 56
Query: 251 IISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRM--KIALG 308
++ + + ++V G + + E + +L+ L R P ++ K+++
Sbjct: 57 VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIA 112
Query: 309 SARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDT--DTHVSTR 363
+GL YL E + KI+HRD+K +NIL++ E K+ DFG++ +D+ ++ V TR
Sbjct: 113 VIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR 167
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 88/177 (49%), Gaps = 20/177 (11%)
Query: 197 LKIATDNFSEANLLGQGGFGYVHK------GVLTNGKVVAIKQLKAGSGQGEREFQAEIE 250
+++ D+F + + LG G G V K G++ K++ ++ A Q RE Q
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ---- 56
Query: 251 IISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRM--KIALG 308
++ + + ++V G + + E + +L+ L R P ++ K+++
Sbjct: 57 VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIA 112
Query: 309 SARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDT--DTHVSTR 363
+GL YL E + KI+HRD+K +NIL++ E K+ DFG++ +D+ ++ V TR
Sbjct: 113 VIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR 167
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 94/202 (46%), Gaps = 23/202 (11%)
Query: 177 PRQSPGMPVGNFKSTFTYEELKIAT----DNFSEANLLGQGGFGYVHKGVLT-NGKVVAI 231
PR S + + + TF +EL + + + +G G +G V T G VA+
Sbjct: 16 PRGSHMLEMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAV 75
Query: 232 KQLK---AGSGQGEREFQAEIEIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFH 288
K+L +R ++ E+ ++ + H +++ L+ F R L E + L H
Sbjct: 76 KKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD--VFTPARSL--EEFNDVYLVTH 130
Query: 289 LHGKDRPVMNWPTRMK------IALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEA 342
L G D + ++ + RGL Y+H IIHRD+K +N+ +++ E
Sbjct: 131 LMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCEL 187
Query: 343 KVADFGLAKHSLDTDT-HVSTR 363
K+ DFGLA+H+ D T +V+TR
Sbjct: 188 KILDFGLARHTDDEMTGYVATR 209
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 88/177 (49%), Gaps = 20/177 (11%)
Query: 197 LKIATDNFSEANLLGQGGFGYVHK------GVLTNGKVVAIKQLKAGSGQGEREFQAEIE 250
+++ D+F + + LG G G V K G++ K++ ++ A Q RE Q
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ---- 56
Query: 251 IISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRM--KIALG 308
++ + + ++V G + + E + +L+ L R P ++ K+++
Sbjct: 57 VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIA 112
Query: 309 SARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDT--DTHVSTR 363
+GL YL E + KI+HRD+K +NIL++ E K+ DFG++ +D+ ++ V TR
Sbjct: 113 VIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR 167
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 88/177 (49%), Gaps = 20/177 (11%)
Query: 197 LKIATDNFSEANLLGQGGFGYVHK------GVLTNGKVVAIKQLKAGSGQGEREFQAEIE 250
+++ D+F + + LG G G V K G++ K++ ++ A Q RE Q
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ---- 56
Query: 251 IISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRM--KIALG 308
++ + + ++V G + + E + +L+ L R P ++ K+++
Sbjct: 57 VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIA 112
Query: 309 SARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDT--DTHVSTR 363
+GL YL E + KI+HRD+K +NIL++ E K+ DFG++ +D+ ++ V TR
Sbjct: 113 VIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR 167
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 77/159 (48%), Gaps = 6/159 (3%)
Query: 196 ELKIATDNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQAEIEIISQ 254
E D + +LG+G +G V+ G L+N +AIK++ + + EI +
Sbjct: 16 EYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKH 75
Query: 255 VHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSA-RGL 313
+ H+++V +G + + E VP +L L K P+ + + GL
Sbjct: 76 LKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGL 135
Query: 314 AYLHEDCQPKIIHRDIKSANILLDD-SFEAKVADFGLAK 351
YLH++ +I+HRDIK N+L++ S K++DFG +K
Sbjct: 136 KYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSK 171
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 72/163 (44%), Gaps = 9/163 (5%)
Query: 198 KIATDNFSEANLLGQGGFGYVHK-GVLTNGKVVAIKQLKAGSGQGEREFQ---AEIEIIS 253
K + +F LG G FG VH NG+ A+K LK ++ + E ++S
Sbjct: 2 KYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLS 61
Query: 254 QVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGL 313
V H ++ + G Q ++ +++ L F L K + N P A L
Sbjct: 62 IVTHPFIIRMWGTFQDAQQIFMIMDYIEGGEL-FSLLRKSQRFPN-PVAKFYAAEVCLAL 119
Query: 314 AYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDT 356
YLH II+RD+K NILLD + K+ DFG AK+ D
Sbjct: 120 EYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV 159
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 79/177 (44%), Gaps = 18/177 (10%)
Query: 193 TYEELKIATDNFSEANLLGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEII 252
T E+ +IA ++ ++G G FG V + L VAIK++ Q +R E++I+
Sbjct: 34 TGEQREIA---YTNCKVIGNGSFGVVFQAKLVESDEVAIKKVL----QDKRFKNRELQIM 86
Query: 253 SQVHHRHLVSLVGYCTFGSQRL------LVYEFVPNKTLEFHLH-GKDRPVMNWPTRMKI 305
V H ++V L + + LV E+VP H K + M
Sbjct: 87 RIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLY 146
Query: 306 ALGSARGLAYLHEDCQPKIIHRDIKSANILLD-DSFEAKVADFGLAKHSLDTDTHVS 361
R LAY+H I HRDIK N+LLD S K+ DFG AK + + +VS
Sbjct: 147 MYQLLRSLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVS 200
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 86/179 (48%), Gaps = 19/179 (10%)
Query: 201 TDNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGER---EFQAEIEIISQVH 256
+D + +LG GG VH L + + VA+K L+A + F+ E + + ++
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 257 HRHLVSLVGYCTFGSQR------LLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSA 310
H +V++ Y T ++ +V E+V TL +H + M +++ +
Sbjct: 71 HPAIVAV--YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP--MTPKRAIEVIADAC 126
Query: 311 RGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTHV--STRVMGT 367
+ L + H Q IIHRD+K ANIL+ + KV DFG+A+ D+ V + V+GT
Sbjct: 127 QALNFSH---QNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGT 182
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 77/159 (48%), Gaps = 6/159 (3%)
Query: 196 ELKIATDNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQAEIEIISQ 254
E D + +LG+G +G V+ G L+N +AIK++ + + EI +
Sbjct: 2 EYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKH 61
Query: 255 VHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSA-RGL 313
+ H+++V +G + + E VP +L L K P+ + + GL
Sbjct: 62 LKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGL 121
Query: 314 AYLHEDCQPKIIHRDIKSANILLDD-SFEAKVADFGLAK 351
YLH++ +I+HRDIK N+L++ S K++DFG +K
Sbjct: 122 KYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSK 157
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 85/174 (48%), Gaps = 23/174 (13%)
Query: 210 LGQGGFGYVHKGVLTN-GKVVAIKQLKAGSGQGERE-FQAEIEIISQVHHRHLVSLVGYC 267
LG GGFGYV + + + G+ VAIKQ + RE + EI+I+ +++H ++VS
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVS-AREV 80
Query: 268 TFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNW----------PTRMKIALGSARGLAYLH 317
G Q+L + P +E+ G R +N P R ++ S+ L YLH
Sbjct: 81 PDGLQKLAPNDL-PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISS-ALRYLH 138
Query: 318 EDCQPKIIHRDIKSANILLD---DSFEAKVADFGLAKHSLDTDTHVSTRVMGTF 368
E+ +IIHRD+K NI+L K+ D G AK LD + T +GT
Sbjct: 139 EN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKE-LD-QGELCTEFVGTL 187
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 85/174 (48%), Gaps = 23/174 (13%)
Query: 210 LGQGGFGYVHKGVLTN-GKVVAIKQLKAGSGQGERE-FQAEIEIISQVHHRHLVSLVGYC 267
LG GGFGYV + + + G+ VAIKQ + RE + EI+I+ +++H ++VS
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVS-AREV 81
Query: 268 TFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNW----------PTRMKIALGSARGLAYLH 317
G Q+L + P +E+ G R +N P R ++ S+ L YLH
Sbjct: 82 PDGLQKLAPNDL-PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISS-ALRYLH 139
Query: 318 EDCQPKIIHRDIKSANILLD---DSFEAKVADFGLAKHSLDTDTHVSTRVMGTF 368
E+ +IIHRD+K NI+L K+ D G AK LD + T +GT
Sbjct: 140 EN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKE-LD-QGELCTEFVGTL 188
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 87/176 (49%), Gaps = 20/176 (11%)
Query: 198 KIATDNFSEANLLGQGGFGYVHK------GVLTNGKVVAIKQLKAGSGQGEREFQAEIEI 251
++ D+F + + LG G G V K G++ K++ ++ A Q RE Q +
Sbjct: 29 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ----V 84
Query: 252 ISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRM--KIALGS 309
+ + + ++V G + + E + +L+ L R P ++ K+++
Sbjct: 85 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIAV 140
Query: 310 ARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDT--DTHVSTR 363
+GL YL E + KI+HRD+K +NIL++ E K+ DFG++ +D+ ++ V TR
Sbjct: 141 IKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR 194
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 80/160 (50%), Gaps = 13/160 (8%)
Query: 203 NFSEANLLGQGGFG--YVHKGVL--TNGKVVAIKQLKAGSGQGEREFQAEIE--IISQVH 256
+F +LGQG FG ++ + V +G + A+K LK + + + ++E I++ V+
Sbjct: 29 HFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVN 88
Query: 257 HRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGS-ARGLAY 315
H +V L + L+ +F+ L L + VM +K L A GL +
Sbjct: 89 HPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRL---SKEVMFTEEDVKFYLAELALGLDH 145
Query: 316 LHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLD 355
LH II+RD+K NILLD+ K+ DFGL+K ++D
Sbjct: 146 LH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAID 182
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 19/165 (11%)
Query: 210 LGQGGFGYVHKGVLT-NGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSLVG 265
+G G +G V T G VA+K+L +R ++ E+ ++ + H +++ L+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 95
Query: 266 YCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------IALGSARGLAYLHED 319
F R L E + L HL G D + ++ + RGL Y+H
Sbjct: 96 --VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH-- 149
Query: 320 CQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDT-HVSTR 363
IIHRD+K +N+ +++ E K+ DFGLA+H+ D T +V+TR
Sbjct: 150 -SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR 193
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 79/161 (49%), Gaps = 32/161 (19%)
Query: 210 LGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQA--EIEIISQVHHRHLVSLVGY 266
+GQG FG V K G+ VA+K++ + + A EI+I+ + H ++V+L+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 267 CTFGSQ--------RLLVYEF--------VPNKTLEFHLHGKDRPVMNWPTRMKIALGSA 310
C + LV++F + N ++F L R M++ L
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRV-------MQMLLN-- 136
Query: 311 RGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
GL Y+H + KI+HRD+K+AN+L+ K+ADFGLA+
Sbjct: 137 -GLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 19/165 (11%)
Query: 210 LGQGGFGYVHKGVLT-NGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSLVG 265
+G G +G V T G VA+K+L +R ++ E+ ++ + H +++ L+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 95
Query: 266 YCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------IALGSARGLAYLHED 319
F R L E + L HL G D + ++ + RGL Y+H
Sbjct: 96 --VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH-- 149
Query: 320 CQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDT-HVSTR 363
IIHRD+K +N+ +++ E K+ DFGLA+H+ D T +V+TR
Sbjct: 150 -SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR 193
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 19/165 (11%)
Query: 210 LGQGGFGYVHKGVLT-NGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSLVG 265
+G G +G V T G VA+K+L +R ++ E+ ++ + H +++ L+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 95
Query: 266 YCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------IALGSARGLAYLHED 319
F R L E + L HL G D + ++ + RGL Y+H
Sbjct: 96 --VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH-- 149
Query: 320 CQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDT-HVSTR 363
IIHRD+K +N+ +++ E K+ DFGLA+H+ D T +V+TR
Sbjct: 150 -SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR 193
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 19/165 (11%)
Query: 210 LGQGGFGYVHKGVLT-NGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSLVG 265
+G G +G V T G VA+K+L +R ++ E+ ++ + H +++ L+
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 84
Query: 266 YCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------IALGSARGLAYLHED 319
F R L E + L HL G D + ++ + RGL Y+H
Sbjct: 85 --VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRGLKYIH-- 138
Query: 320 CQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDT-HVSTR 363
IIHRD+K +N+ +++ E K+ DFGLA+H+ D T +V+TR
Sbjct: 139 -SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 182
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 78/169 (46%), Gaps = 12/169 (7%)
Query: 196 ELKIATDNFSEANLLGQGGFGYVHKGVLTN-GKVVAIKQLKAGSGQGEREFQA---EIEI 251
++K+ ++F +LG+G FG V + AIK LK + + + E +
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 71
Query: 252 ISQVHHRHLVSLVGYCTFGSQR--LLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGS 309
+S ++ + +CTF ++ V E++ L +H+ + ++ T A
Sbjct: 72 LSLAWEHPFLTHM-FCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATF--YAAEI 128
Query: 310 ARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDT 358
GL +LH I++RD+K NILLD K+ADFG+ K ++ D
Sbjct: 129 ILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDA 174
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 91/195 (46%), Gaps = 23/195 (11%)
Query: 184 PVGNFKSTFTYEELKIAT----DNFSEANLLGQGGFGYVHKGVLT-NGKVVAIKQLK--- 235
P+ + TF +EL + + + +G G +G V T G VA+K+L
Sbjct: 2 PMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF 61
Query: 236 AGSGQGEREFQAEIEIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRP 295
+R ++ E+ ++ + H +++ L+ F R L E + L HL G D
Sbjct: 62 QSIIHAKRTYR-ELRLLKHMKHENVIGLLD--VFTPARSL--EEFNDVYLVTHLMGADLN 116
Query: 296 VMNWPTRMK------IALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGL 349
+ ++ + RGL Y+H IIHRD+K +N+ +++ E K+ DFGL
Sbjct: 117 NIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGL 173
Query: 350 AKHSLDTDT-HVSTR 363
A+H+ D T +V+TR
Sbjct: 174 ARHTDDEMTGYVATR 188
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 80/164 (48%), Gaps = 38/164 (23%)
Query: 210 LGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGERE-----FQAEIEIISQVHHRHLVSL 263
+GQG FG V K G+ VA+K++ + E+E EI+I+ + H ++V+L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLM---ENEKEGFPITALREIKILQLLKHENVVNL 82
Query: 264 VGYCT--------FGSQRLLVYEF--------VPNKTLEFHLHGKDRPVMNWPTRMKIAL 307
+ C + LV++F + N ++F L R M++ L
Sbjct: 83 IEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRV-------MQMLL 135
Query: 308 GSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
GL Y+H + KI+HRD+K+AN+L+ K+ADFGLA+
Sbjct: 136 N---GLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 19/165 (11%)
Query: 210 LGQGGFGYVHKGVLT-NGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSLVG 265
+G G +G V T G VA+K+L +R ++ E+ ++ + H +++ L+
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 84
Query: 266 YCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------IALGSARGLAYLHED 319
F R L E + L HL G D + ++ + RGL Y+H
Sbjct: 85 --VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH-- 138
Query: 320 CQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDT-HVSTR 363
IIHRD+K +N+ +++ E K+ DFGLA+H+ D T +V+TR
Sbjct: 139 -SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 182
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 19/165 (11%)
Query: 210 LGQGGFGYVHKGVLT-NGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSLVG 265
+G G +G V T G VA+K+L +R ++ E+ ++ + H +++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 266 YCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------IALGSARGLAYLHED 319
F R L E + L HL G D + ++ + RGL Y+H
Sbjct: 89 --VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH-- 142
Query: 320 CQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDT-HVSTR 363
IIHRD+K +N+ +++ E K+ DFGLA+H+ D T +V+TR
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 186
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 79/161 (49%), Gaps = 32/161 (19%)
Query: 210 LGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQA--EIEIISQVHHRHLVSLVGY 266
+GQG FG V K G+ VA+K++ + + A EI+I+ + H ++V+L+
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 267 CTFGSQ--------RLLVYEF--------VPNKTLEFHLHGKDRPVMNWPTRMKIALGSA 310
C + LV++F + N ++F L R M++ L
Sbjct: 85 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRV-------MQMLLN-- 135
Query: 311 RGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
GL Y+H + KI+HRD+K+AN+L+ K+ADFGLA+
Sbjct: 136 -GLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 172
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 76/160 (47%), Gaps = 13/160 (8%)
Query: 203 NFSEANLLGQGGFGYVHKGVLTNG----KVVAIKQLKAGSGQGEREFQAEIE--IISQVH 256
F +LGQG FG V +G ++ A+K LK + + + ++E I+ +V+
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 84
Query: 257 HRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGS-ARGLAY 315
H +V L + L+ +F+ L L + VM +K L A L +
Sbjct: 85 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL---SKEVMFTEEDVKFYLAELALALDH 141
Query: 316 LHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLD 355
LH II+RD+K NILLD+ K+ DFGL+K S+D
Sbjct: 142 LH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESID 178
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 19/165 (11%)
Query: 210 LGQGGFGYVHKGVLT-NGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSLVG 265
+G G +G V T G VA+K+L +R ++ E+ ++ + H +++ L+
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 98
Query: 266 YCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------IALGSARGLAYLHED 319
F R L E + L HL G D + ++ + RGL Y+H
Sbjct: 99 --VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH-- 152
Query: 320 CQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDT-HVSTR 363
IIHRD+K +N+ +++ E K+ DFGLA+H+ D T +V+TR
Sbjct: 153 -SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 196
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 86/179 (48%), Gaps = 19/179 (10%)
Query: 201 TDNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGER---EFQAEIEIISQVH 256
+D + +LG GG VH L + + VA+K L+A + F+ E + + ++
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 257 HRHLVSLVGYCTFGSQR------LLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSA 310
H +V++ Y T ++ +V E+V TL +H + M +++ +
Sbjct: 71 HPAIVAV--YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP--MTPKRAIEVIADAC 126
Query: 311 RGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTHV--STRVMGT 367
+ L + H Q IIHRD+K ANI++ + KV DFG+A+ D+ V + V+GT
Sbjct: 127 QALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGT 182
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 19/165 (11%)
Query: 210 LGQGGFGYVHKGVLT-NGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSLVG 265
+G G +G V T G VA+K+L +R ++ E+ ++ + H +++ L+
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 93
Query: 266 YCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------IALGSARGLAYLHED 319
F R L E + L HL G D + ++ + RGL Y+H
Sbjct: 94 --VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH-- 147
Query: 320 CQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDT-HVSTR 363
IIHRD+K +N+ +++ E K+ DFGLA+H+ D T +V+TR
Sbjct: 148 -SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR 191
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 71/151 (47%), Gaps = 12/151 (7%)
Query: 210 LGQGGFGYVHKGV-LTNGKVVAIK----QLKAGSGQGEREFQAEIEIISQVHHRHLVSLV 264
LG+G FG V + VA+K QL S R + EI + + H H++ L
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMR-VEREISYLKLLRHPHIIKLY 75
Query: 265 GYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQPKI 324
T + ++V E+ + ++ + K R + R + A + Y H + KI
Sbjct: 76 DVITTPTDIVMVIEYAGGELFDYIVEKK-RMTEDEGRRFFQQIICA--IEYCH---RHKI 129
Query: 325 IHRDIKSANILLDDSFEAKVADFGLAKHSLD 355
+HRD+K N+LLDD+ K+ADFGL+ D
Sbjct: 130 VHRDLKPENLLLDDNLNVKIADFGLSNIMTD 160
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 19/165 (11%)
Query: 210 LGQGGFGYVHKGVLT-NGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSLVG 265
+G G +G V T G VA+K+L +R ++ E+ ++ + H +++ L+
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 93
Query: 266 YCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------IALGSARGLAYLHED 319
F R L E + L HL G D + ++ + RGL Y+H
Sbjct: 94 --VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH-- 147
Query: 320 CQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDT-HVSTR 363
IIHRD+K +N+ +++ E K+ DFGLA+H+ D T +V+TR
Sbjct: 148 -SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 191
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 78/169 (46%), Gaps = 12/169 (7%)
Query: 196 ELKIATDNFSEANLLGQGGFGYVHKGVLTN-GKVVAIKQLKAGSGQGEREFQA---EIEI 251
++K+ ++F +LG+G FG V + AIK LK + + + E +
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 70
Query: 252 ISQVHHRHLVSLVGYCTFGSQR--LLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGS 309
+S ++ + +CTF ++ V E++ L +H+ + ++ T A
Sbjct: 71 LSLAWEHPFLTHM-FCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATF--YAAEI 127
Query: 310 ARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDT 358
GL +LH I++RD+K NILLD K+ADFG+ K ++ D
Sbjct: 128 ILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDA 173
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 19/165 (11%)
Query: 210 LGQGGFGYVHKGVLT-NGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSLVG 265
+G G +G V T G VA+K+L +R ++ E+ ++ + H +++ L+
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 87
Query: 266 YCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------IALGSARGLAYLHED 319
F R L E + L HL G D + ++ + RGL Y+H
Sbjct: 88 --VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH-- 141
Query: 320 CQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDT-HVSTR 363
IIHRD+K +N+ +++ E K+ DFGLA+H+ D T +V+TR
Sbjct: 142 -SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 185
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 19/165 (11%)
Query: 210 LGQGGFGYVHKGVLT-NGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSLVG 265
+G G +G V T G VA+K+L +R ++ E+ ++ + H +++ L+
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 108
Query: 266 YCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------IALGSARGLAYLHED 319
F R L E + L HL G D + ++ + RGL Y+H
Sbjct: 109 --VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH-- 162
Query: 320 CQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDT-HVSTR 363
IIHRD+K +N+ +++ E K+ DFGLA+H+ D T +V+TR
Sbjct: 163 -SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 206
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 19/165 (11%)
Query: 210 LGQGGFGYVHKGVLT-NGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSLVG 265
+G G +G V T G VA+K+L +R ++ E+ ++ + H +++ L+
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 107
Query: 266 YCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------IALGSARGLAYLHED 319
F R L E + L HL G D + ++ + RGL Y+H
Sbjct: 108 --VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH-- 161
Query: 320 CQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDT-HVSTR 363
IIHRD+K +N+ +++ E K+ DFGLA+H+ D T +V+TR
Sbjct: 162 -SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 205
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 19/165 (11%)
Query: 210 LGQGGFGYVHKGVLT-NGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSLVG 265
+G G +G V T G VA+K+L +R ++ E+ ++ + H +++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 266 YCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------IALGSARGLAYLHED 319
F R L E + L HL G D + ++ + RGL Y+H
Sbjct: 89 --VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH-- 142
Query: 320 CQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDT-HVSTR 363
IIHRD+K +N+ +++ E K+ DFGLA+H+ D T +V+TR
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 186
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 19/165 (11%)
Query: 210 LGQGGFGYVHKGVLT-NGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSLVG 265
+G G +G V T G VA+K+L +R ++ E+ ++ + H +++ L+
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 85
Query: 266 YCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------IALGSARGLAYLHED 319
F R L E + L HL G D + ++ + RGL Y+H
Sbjct: 86 --VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH-- 139
Query: 320 CQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDT-HVSTR 363
IIHRD+K +N+ +++ E K+ DFGLA+H+ D T +V+TR
Sbjct: 140 -SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 183
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 19/165 (11%)
Query: 210 LGQGGFGYVHKGVLT-NGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSLVG 265
+G G +G V T G VA+K+L +R ++ E+ ++ + H +++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 266 YCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------IALGSARGLAYLHED 319
F R L E + L HL G D + ++ + RGL Y+H
Sbjct: 89 --VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH-- 142
Query: 320 CQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDT-HVSTR 363
IIHRD+K +N+ +++ E K+ DFGLA+H+ D T +V+TR
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 186
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 19/165 (11%)
Query: 210 LGQGGFGYVHKGVLT-NGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSLVG 265
+G G +G V T G VA+K+L +R ++ E+ ++ + H +++ L+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 95
Query: 266 YCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------IALGSARGLAYLHED 319
F R L E + L HL G D + ++ + RGL Y+H
Sbjct: 96 --VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH-- 149
Query: 320 CQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDT-HVSTR 363
IIHRD+K +N+ +++ E K+ DFGLA+H+ D T +V+TR
Sbjct: 150 -SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 193
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 86/179 (48%), Gaps = 19/179 (10%)
Query: 201 TDNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGER---EFQAEIEIISQVH 256
+D + +LG GG VH L + + VA+K L+A + F+ E + + ++
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 257 HRHLVSLVGYCTFGSQR------LLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSA 310
H +V++ Y T ++ +V E+V TL +H + M +++ +
Sbjct: 71 HPAIVAV--YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP--MTPKRAIEVIADAC 126
Query: 311 RGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTHV--STRVMGT 367
+ L + H Q IIHRD+K ANI++ + KV DFG+A+ D+ V + V+GT
Sbjct: 127 QALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGT 182
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 19/165 (11%)
Query: 210 LGQGGFGYVHKGVLT-NGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSLVG 265
+G G +G V T G VA+K+L +R ++ E+ ++ + H +++ L+
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 84
Query: 266 YCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------IALGSARGLAYLHED 319
F R L E + L HL G D + ++ + RGL Y+H
Sbjct: 85 --VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH-- 138
Query: 320 CQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDT-HVSTR 363
IIHRD+K +N+ +++ E K+ DFGLA+H+ D T +V+TR
Sbjct: 139 -SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 182
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 19/165 (11%)
Query: 210 LGQGGFGYVHKGVLT-NGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSLVG 265
+G G +G V T G VA+K+L +R ++ E+ ++ + H +++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 266 YCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------IALGSARGLAYLHED 319
F R L E + L HL G D + ++ + RGL Y+H
Sbjct: 89 --VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH-- 142
Query: 320 CQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDT-HVSTR 363
IIHRD+K +N+ +++ E K+ DFGLA+H+ D T +V+TR
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 186
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 19/165 (11%)
Query: 210 LGQGGFGYVHKGVLT-NGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSLVG 265
+G G +G V T G VA+K+L +R ++ E+ ++ + H +++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 266 YCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------IALGSARGLAYLHED 319
F R L E + L HL G D + ++ + RGL Y+H
Sbjct: 89 --VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH-- 142
Query: 320 CQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDT-HVSTR 363
IIHRD+K +N+ +++ E K+ DFGLA+H+ D T +V+TR
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 186
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 19/165 (11%)
Query: 210 LGQGGFGYVHKGVLT-NGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSLVG 265
+G G +G V T G VA+K+L +R ++ E+ ++ + H +++ L+
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 85
Query: 266 YCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------IALGSARGLAYLHED 319
F R L E + L HL G D + ++ + RGL Y+H
Sbjct: 86 --VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH-- 139
Query: 320 CQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDT-HVSTR 363
IIHRD+K +N+ +++ E K+ DFGLA+H+ D T +V+TR
Sbjct: 140 -SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 183
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 19/165 (11%)
Query: 210 LGQGGFGYVHKGVLT-NGKVVAIKQLKA---GSGQGEREFQAEIEIISQVHHRHLVSLVG 265
+G G +G V T G VA+K+L +R ++ E+ ++ + H +++ L+
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 100
Query: 266 YCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------IALGSARGLAYLHED 319
F R L E + L HL G D + ++ + RGL Y+H
Sbjct: 101 --VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH-- 154
Query: 320 CQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDT-HVSTR 363
IIHRD+K +N+ +++ E K+ DFGLA+H+ D T +V+TR
Sbjct: 155 -SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 198
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 19/165 (11%)
Query: 210 LGQGGFGYVHKGVLT-NGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSLVG 265
+G G +G V T G VA+K+L +R ++ E+ ++ + H +++ L+
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 86
Query: 266 YCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------IALGSARGLAYLHED 319
F R L E + L HL G D + ++ + RGL Y+H
Sbjct: 87 --VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH-- 140
Query: 320 CQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDT-HVSTR 363
IIHRD+K +N+ +++ E K+ DFGLA+H+ D T +V+TR
Sbjct: 141 -SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 184
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 19/165 (11%)
Query: 210 LGQGGFGYVHKGVLT-NGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSLVG 265
+G G +G V T G VA+K+L +R ++ E+ ++ + H +++ L+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 90
Query: 266 YCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------IALGSARGLAYLHED 319
F R L E + L HL G D + ++ + RGL Y+H
Sbjct: 91 --VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH-- 144
Query: 320 CQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDT-HVSTR 363
IIHRD+K +N+ +++ E K+ DFGLA+H+ D T +V+TR
Sbjct: 145 -SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 188
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 19/165 (11%)
Query: 210 LGQGGFGYVHKGVLT-NGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSLVG 265
+G G +G V T G VA+K+L +R ++ E+ ++ + H +++ L+
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 100
Query: 266 YCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------IALGSARGLAYLHED 319
F R L E + L HL G D + ++ + RGL Y+H
Sbjct: 101 --VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH-- 154
Query: 320 CQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDT-HVSTR 363
IIHRD+K +N+ +++ E K+ DFGLA+H+ D T +V+TR
Sbjct: 155 -SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 198
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 19/165 (11%)
Query: 210 LGQGGFGYVHKGVLT-NGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSLVG 265
+G G +G V T G VA+K+L +R ++ E+ ++ + H +++ L+
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 100
Query: 266 YCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------IALGSARGLAYLHED 319
F R L E + L HL G D + ++ + RGL Y+H
Sbjct: 101 --VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH-- 154
Query: 320 CQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDT-HVSTR 363
IIHRD+K +N+ +++ E K+ DFGLA+H+ D T +V+TR
Sbjct: 155 -SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 198
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 19/165 (11%)
Query: 210 LGQGGFGYVHKGVLT-NGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSLVG 265
+G G +G V T G VA+K+L +R ++ E+ ++ + H +++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 266 YCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------IALGSARGLAYLHED 319
F R L E + L HL G D + ++ + RGL Y+H
Sbjct: 89 --VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH-- 142
Query: 320 CQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDT-HVSTR 363
IIHRD+K +N+ +++ E K+ DFGLA+H+ D T +V+TR
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 186
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 19/165 (11%)
Query: 210 LGQGGFGYVHKGVLT-NGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSLVG 265
+G G +G V T G VA+K+L +R ++ E+ ++ + H +++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 266 YCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------IALGSARGLAYLHED 319
F R L E + L HL G D + ++ + RGL Y+H
Sbjct: 89 --VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH-- 142
Query: 320 CQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDT-HVSTR 363
IIHRD+K +N+ +++ E K+ DFGLA+H+ D T +V+TR
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 186
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 19/165 (11%)
Query: 210 LGQGGFGYVHKGVLT-NGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSLVG 265
+G G +G V T G VA+K+L +R ++ E+ ++ + H +++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 266 YCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------IALGSARGLAYLHED 319
F R L E + L HL G D + ++ + RGL Y+H
Sbjct: 89 --VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH-- 142
Query: 320 CQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDT-HVSTR 363
IIHRD+K +N+ +++ E K+ DFGLA+H+ D T +V+TR
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 186
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 19/165 (11%)
Query: 210 LGQGGFGYVHKGVLT-NGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSLVG 265
+G G +G V T G VA+K+L +R ++ E+ ++ + H +++ L+
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 93
Query: 266 YCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------IALGSARGLAYLHED 319
F R L E + L HL G D + ++ + RGL Y+H
Sbjct: 94 --VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH-- 147
Query: 320 CQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDT-HVSTR 363
IIHRD+K +N+ +++ E K+ DFGLA+H+ D T +V+TR
Sbjct: 148 -SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 191
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 19/165 (11%)
Query: 210 LGQGGFGYVHKGVLT-NGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSLVG 265
+G G +G V T G VA+K+L +R ++ E+ ++ + H +++ L+
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 93
Query: 266 YCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------IALGSARGLAYLHED 319
F R L E + L HL G D + ++ + RGL Y+H
Sbjct: 94 --VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH-- 147
Query: 320 CQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDT-HVSTR 363
IIHRD+K +N+ +++ E K+ DFGLA+H+ D T +V+TR
Sbjct: 148 -SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR 191
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 19/165 (11%)
Query: 210 LGQGGFGYVHKGVLT-NGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSLVG 265
+G G +G V T G VA+K+L +R ++ E+ ++ + H +++ L+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 90
Query: 266 YCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------IALGSARGLAYLHED 319
F R L E + L HL G D + ++ + RGL Y+H
Sbjct: 91 --VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH-- 144
Query: 320 CQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDT-HVSTR 363
IIHRD+K +N+ +++ E K+ DFGLA+H+ D T +V+TR
Sbjct: 145 -SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 188
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 19/165 (11%)
Query: 210 LGQGGFGYVHKGVLT-NGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSLVG 265
+G G +G V T G VA+K+L +R ++ E+ ++ + H +++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 266 YCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------IALGSARGLAYLHED 319
F R L E + L HL G D + ++ + RGL Y+H
Sbjct: 89 --VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH-- 142
Query: 320 CQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDT-HVSTR 363
IIHRD+K +N+ +++ E K+ DFGLA+H+ D T +V+TR
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 186
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 80/164 (48%), Gaps = 38/164 (23%)
Query: 210 LGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGERE-----FQAEIEIISQVHHRHLVSL 263
+GQG FG V K G+ VA+K++ + E+E EI+I+ + H ++V+L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLM---ENEKEGFPITALREIKILQLLKHENVVNL 82
Query: 264 VGYCTFGSQ--------RLLVYEF--------VPNKTLEFHLHGKDRPVMNWPTRMKIAL 307
+ C + LV++F + N ++F L R M++ L
Sbjct: 83 IEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRV-------MQMLL 135
Query: 308 GSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
GL Y+H + KI+HRD+K+AN+L+ K+ADFGLA+
Sbjct: 136 N---GLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 19/165 (11%)
Query: 210 LGQGGFGYVHKGVLT-NGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSLVG 265
+G G +G V T G VA+K+L +R ++ E+ ++ + H +++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 266 YCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------IALGSARGLAYLHED 319
F R L E + L HL G D + ++ + RGL Y+H
Sbjct: 89 --VFTPARSL--EEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIH-- 142
Query: 320 CQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDT-HVSTR 363
IIHRD+K +N+ +++ E K+ DFGLA+H+ D T +V+TR
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 186
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 19/165 (11%)
Query: 210 LGQGGFGYVHKGVLT-NGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSLVG 265
+G G +G V T G VA+K+L +R ++ E+ ++ + H +++ L+
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 99
Query: 266 YCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------IALGSARGLAYLHED 319
F R L E + L HL G D + ++ + RGL Y+H
Sbjct: 100 --VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH-- 153
Query: 320 CQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDT-HVSTR 363
IIHRD+K +N+ +++ E K+ DFGLA+H+ D T +V+TR
Sbjct: 154 -SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 197
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 19/165 (11%)
Query: 210 LGQGGFGYVHKGVLT-NGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSLVG 265
+G G +G V T G VA+K+L +R ++ E+ ++ + H +++ L+
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 94
Query: 266 YCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------IALGSARGLAYLHED 319
F R L E + L HL G D + ++ + RGL Y+H
Sbjct: 95 --VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH-- 148
Query: 320 CQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDT-HVSTR 363
IIHRD+K +N+ +++ E K+ DFGLA+H+ D T +V+TR
Sbjct: 149 -SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 192
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 19/165 (11%)
Query: 210 LGQGGFGYVHKGVLT-NGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSLVG 265
+G G +G V T G VA+K+L +R ++ E+ ++ + H +++ L+
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 108
Query: 266 YCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------IALGSARGLAYLHED 319
F R L E + L HL G D + ++ + RGL Y+H
Sbjct: 109 --VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH-- 162
Query: 320 CQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDT-HVSTR 363
IIHRD+K +N+ +++ E K+ DFGLA+H+ D T +V+TR
Sbjct: 163 -SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 206
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 81/161 (50%), Gaps = 21/161 (13%)
Query: 210 LGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLVGYCTF 269
+G+G +G V +G G+ VA+K S + E+ + E E+ + V RH +++G+
Sbjct: 45 VGKGRYGEVWRGSW-QGENVAVKIF---SSRDEKSWFRETELYNTVMLRH-ENILGFIAS 99
Query: 270 -------GSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDC-- 320
+Q L+ + +L +L ++ + ++I L A GLA+LH +
Sbjct: 100 DMTSRHSSTQLWLITHYHEMGSLYDYLQ---LTTLDTVSCLRIVLSIASGLAHLHIEIFG 156
Query: 321 ---QPKIIHRDIKSANILLDDSFEAKVADFGLA-KHSLDTD 357
+P I HRD+KS NIL+ + + +AD GLA HS T+
Sbjct: 157 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTN 197
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 19/165 (11%)
Query: 210 LGQGGFGYVHKGVLT-NGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSLVG 265
+G G +G V T G VA+K+L +R ++ E+ ++ + H +++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 266 YCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------IALGSARGLAYLHED 319
F R L E + L HL G D + ++ + RGL Y+H
Sbjct: 89 --VFTPARSL--EEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIH-- 142
Query: 320 CQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDT-HVSTR 363
IIHRD+K +N+ +++ E K+ DFGLA+H+ D T +V+TR
Sbjct: 143 -SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR 186
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 19/165 (11%)
Query: 210 LGQGGFGYVHKGVLT-NGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSLVG 265
+G G +G V T G VA+K+L +R ++ E+ ++ + H +++ L+
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 94
Query: 266 YCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------IALGSARGLAYLHED 319
F R L E + L HL G D + ++ + RGL Y+H
Sbjct: 95 --VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH-- 148
Query: 320 CQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDT-HVSTR 363
IIHRD+K +N+ +++ E K+ DFGLA+H+ D T +V+TR
Sbjct: 149 -SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 192
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 19/165 (11%)
Query: 210 LGQGGFGYVHKGVLT-NGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSLVG 265
+G G +G V T G VA+K+L +R ++ E+ ++ + H +++ L+
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 99
Query: 266 YCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------IALGSARGLAYLHED 319
F R L E + L HL G D + ++ + RGL Y+H
Sbjct: 100 --VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH-- 153
Query: 320 CQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDT-HVSTR 363
IIHRD+K +N+ +++ E K+ DFGLA+H+ D T +V+TR
Sbjct: 154 -SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR 197
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 19/165 (11%)
Query: 210 LGQGGFGYVHKGVLT-NGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSLVG 265
+G G +G V T G VA+K+L +R ++ E+ ++ + H +++ L+
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 107
Query: 266 YCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------IALGSARGLAYLHED 319
F R L E + L HL G D + ++ + RGL Y+H
Sbjct: 108 --VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH-- 161
Query: 320 CQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDT-HVSTR 363
IIHRD+K +N+ +++ E K+ DFGLA+H+ D T +V+TR
Sbjct: 162 -SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 205
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 86/198 (43%), Gaps = 26/198 (13%)
Query: 183 MPVGNFKSTFTYEELKIATDNFSEANLLGQGGFGYVHKGVL------TNGKVVAIKQLK- 235
MP+ N +E+ ++ F E LG+ FG V+KG L + VAIK LK
Sbjct: 9 MPLINQHKQAKLKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKD 66
Query: 236 AGSGQGEREFQAEIEIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGK--- 292
G EF+ E + +++ H ++V L+G T +++ + + L L +
Sbjct: 67 KAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPH 126
Query: 293 --------DRPV---MNWPTRMKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFE 341
DR V + P + + A G+ YL ++H+D+ + N+L+ D
Sbjct: 127 SDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLN 183
Query: 342 AKVADFGLAKHSLDTDTH 359
K++D GL + D +
Sbjct: 184 VKISDLGLFREVYAADYY 201
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 80/165 (48%), Gaps = 19/165 (11%)
Query: 210 LGQGGFGYVHKGV-LTNGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSLVG 265
+G G +G V + +G +A+K+L +R ++ E+ ++ + H +++ L+
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 117
Query: 266 YCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------IALGSARGLAYLHED 319
T + E + L HL G D + ++ + RGL Y+H
Sbjct: 118 VFTPATS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH-- 171
Query: 320 CQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDT-HVSTR 363
IIHRD+K +N+ +++ E K+ DFGLA+H+ D T +V+TR
Sbjct: 172 -SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 215
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 78/168 (46%), Gaps = 20/168 (11%)
Query: 199 IATDNFSEANLLGQGGFGYVHKGVL-TNGKVVAIKQLKAGSGQGE---------REFQAE 248
+AT + +G G +G V+K +G VA+K ++ +G G RE A
Sbjct: 6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREV-AL 64
Query: 249 IEIISQVHHRHLVSLVGYCTFGS-----QRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRM 303
+ + H ++V L+ C + LV+E V ++ L +L P + T
Sbjct: 65 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIK 123
Query: 304 KIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ RGL +LH +C I+HRD+K NIL+ K+ADFGLA+
Sbjct: 124 DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR 168
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 85/176 (48%), Gaps = 20/176 (11%)
Query: 198 KIATDNFSEANLLGQGGFGYVHK------GVLTNGKVVAIKQLKAGSGQGEREFQAEIEI 251
++ D+F + + LG G G V K G++ K++ ++ A Q RE Q +
Sbjct: 5 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ----V 60
Query: 252 ISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRM--KIALGS 309
+ + + ++V G + + E + +L+ L R P ++ K+++
Sbjct: 61 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIAV 116
Query: 310 ARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLD--TDTHVSTR 363
+GL YL E + KI+HRD+K +NIL++ E K+ DFG++ +D + V TR
Sbjct: 117 IKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFVGTR 170
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 85/179 (47%), Gaps = 19/179 (10%)
Query: 201 TDNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGER---EFQAEIEIISQVH 256
+D + +LG GG VH L + VA+K L+A + F+ E + + ++
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 257 HRHLVSLVGYCTFGSQR------LLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSA 310
H +V++ Y T ++ +V E+V TL +H + M +++ +
Sbjct: 71 HPAIVAV--YATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP--MTPKRAIEVIADAC 126
Query: 311 RGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTHV--STRVMGT 367
+ L + H Q IIHRD+K ANI++ + KV DFG+A+ D+ V + V+GT
Sbjct: 127 QALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGT 182
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 81/161 (50%), Gaps = 21/161 (13%)
Query: 210 LGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLVGYCTF 269
+G+G +G V +G G+ VA+K S + E+ + E E+ + V RH +++G+
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIF---SSRDEKSWFRETELYNTVMLRH-ENILGFIAS 70
Query: 270 -------GSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDC-- 320
+Q L+ + +L +L ++ + ++I L A GLA+LH +
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYLQ---LTTLDTVSCLRIVLSIASGLAHLHIEIFG 127
Query: 321 ---QPKIIHRDIKSANILLDDSFEAKVADFGLA-KHSLDTD 357
+P I HRD+KS NIL+ + + +AD GLA HS T+
Sbjct: 128 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTN 168
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 63/118 (53%), Gaps = 8/118 (6%)
Query: 244 EFQAEIEIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTL-----EFHLHGKDRPVMN 298
+F+ E++II+ + + + ++ G T + ++YE++ N ++ F + K+
Sbjct: 89 DFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFI 148
Query: 299 WPTRMKIALGSA-RGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLD 355
+K + S +Y+H + I HRD+K +NIL+D + K++DFG +++ +D
Sbjct: 149 PIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVD 204
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 19/165 (11%)
Query: 210 LGQGGFGYVHKGVLT-NGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSLVG 265
+G G +G V T G VA+K+L +R ++ E+ ++ + H +++ L+
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 94
Query: 266 YCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------IALGSARGLAYLHED 319
F R L E + L HL G D + ++ + RGL Y+H
Sbjct: 95 --VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH-- 148
Query: 320 CQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDT-HVSTR 363
IIHRD+K +N+ +++ E K+ DFGLA+H+ D T +V+TR
Sbjct: 149 -SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 192
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 76/160 (47%), Gaps = 13/160 (8%)
Query: 203 NFSEANLLGQGGFGYVHKGVLTNG----KVVAIKQLKAGSGQGEREFQAEIE--IISQVH 256
F +LGQG FG V +G ++ A+K LK + + + ++E I+ +V+
Sbjct: 26 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 85
Query: 257 HRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGS-ARGLAY 315
H +V L + L+ +F+ L L + VM +K L A L +
Sbjct: 86 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL---SKEVMFTEEDVKFYLAELALALDH 142
Query: 316 LHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLD 355
LH II+RD+K NILLD+ K+ DFGL+K S+D
Sbjct: 143 LH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESID 179
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 78/153 (50%), Gaps = 15/153 (9%)
Query: 210 LGQGGFGYVHKGVL-TNGKVVAIKQLK-AGSGQGEREFQAEIEIISQVHHR-HLVSLVGY 266
+G G G V K G V+A+KQ++ +G+ + + +++++ + H ++V G
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGT 92
Query: 267 CTFGSQRLLVYEFVPN--KTLEFHLHGKDRPVMNWPTRM--KIALGSARGLAYLHEDCQP 322
+ + E + + L+ + G P+ P R+ K+ + + L YL E +
Sbjct: 93 FITNTDVFIAMELMGTCAEKLKKRMQG---PI---PERILGKMTVAIVKALYYLKE--KH 144
Query: 323 KIIHRDIKSANILLDDSFEAKVADFGLAKHSLD 355
+IHRD+K +NILLD+ + K+ DFG++ +D
Sbjct: 145 GVIHRDVKPSNILLDERGQIKLCDFGISGRLVD 177
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 76/160 (47%), Gaps = 13/160 (8%)
Query: 203 NFSEANLLGQGGFGYVHKGVLTNG----KVVAIKQLKAGSGQGEREFQAEIE--IISQVH 256
F +LGQG FG V +G ++ A+K LK + + + ++E I+ +V+
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 84
Query: 257 HRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGS-ARGLAY 315
H +V L + L+ +F+ L L + VM +K L A L +
Sbjct: 85 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL---SKEVMFTEEDVKFYLAELALALDH 141
Query: 316 LHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLD 355
LH II+RD+K NILLD+ K+ DFGL+K S+D
Sbjct: 142 LH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESID 178
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 87/200 (43%), Gaps = 24/200 (12%)
Query: 183 MPVGNFKSTFTYEELKIATDNFSEANLLGQGGFGYVHKGVLTNGK----VVAIKQLKA-G 237
+P G+ + E++ I + +LG+G FG V +G L VA+K +K
Sbjct: 15 VPRGSEELQNKLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDN 74
Query: 238 SGQGE-REFQAEIEIISQVHHRHLVSLVGYCTFGSQR-----LLVYEFVPNKTLEFHLHG 291
S Q E EF +E + H +++ L+G C S + +++ F+ L +L
Sbjct: 75 SSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLY 134
Query: 292 -------KDRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKV 344
K P+ T +K + A G+ YL +HRD+ + N +L D V
Sbjct: 135 SRLETGPKHIPL---QTLLKFMVDIALGMEYLS---NRNFLHRDLAARNCMLRDDMTVCV 188
Query: 345 ADFGLAKHSLDTDTHVSTRV 364
ADFGL+K D + R+
Sbjct: 189 ADFGLSKKIYSGDYYRQGRI 208
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 81/161 (50%), Gaps = 21/161 (13%)
Query: 210 LGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLVGYCTF 269
+G+G +G V +G G+ VA+K S + E+ + E E+ + V RH +++G+
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIF---SSRDEKSWFRETELYNTVMLRH-ENILGFIAS 70
Query: 270 -------GSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDC-- 320
+Q L+ + +L +L ++ + ++I L A GLA+LH +
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYLQ---LTTLDTVSCLRIVLSIASGLAHLHIEIFG 127
Query: 321 ---QPKIIHRDIKSANILLDDSFEAKVADFGLA-KHSLDTD 357
+P I HRD+KS NIL+ + + +AD GLA HS T+
Sbjct: 128 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTN 168
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 19/165 (11%)
Query: 210 LGQGGFGYVHKGVLT-NGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSLVG 265
+G G +G V T G VA+K+L +R ++ E+ ++ + H +++ L+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 90
Query: 266 YCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------IALGSARGLAYLHED 319
F R L E + L HL G D + ++ + RGL Y+H
Sbjct: 91 --VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH-- 144
Query: 320 CQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDT-HVSTR 363
IIHRD+K +N+ +++ E K+ DFGLA+H+ D T +V+TR
Sbjct: 145 -SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR 188
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 87/176 (49%), Gaps = 20/176 (11%)
Query: 198 KIATDNFSEANLLGQGGFGYVHK------GVLTNGKVVAIKQLKAGSGQGEREFQAEIEI 251
++ D+F + + LG G G V K G++ K++ ++ A Q RE Q +
Sbjct: 21 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ----V 76
Query: 252 ISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRM--KIALGS 309
+ + + ++V G + + E + +L+ L R P ++ K+++
Sbjct: 77 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRI----PEQILGKVSIAV 132
Query: 310 ARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDT--DTHVSTR 363
+GL YL E + KI+HRD+K +NIL++ E K+ DFG++ +D+ ++ V TR
Sbjct: 133 IKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR 186
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 19/165 (11%)
Query: 210 LGQGGFGYVHKGVLT-NGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSLVG 265
+G G +G V T G VA+K+L +R ++ E+ ++ + H +++ L+
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 94
Query: 266 YCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------IALGSARGLAYLHED 319
F R L E + L HL G D + ++ + RGL Y+H
Sbjct: 95 --VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH-- 148
Query: 320 CQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDT-HVSTR 363
IIHRD+K +N+ +++ E K+ DFGLA+H+ D T +V+TR
Sbjct: 149 -SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR 192
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 19/165 (11%)
Query: 210 LGQGGFGYVHKGVLT-NGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSLVG 265
+G G +G V T G VA+K+L +R ++ E+ ++ + H +++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 266 YCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------IALGSARGLAYLHED 319
F R L E + L HL G D + ++ + RGL Y+H
Sbjct: 89 --VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH-- 142
Query: 320 CQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDT-HVSTR 363
IIHRD+K +N+ +++ E K+ D+GLA+H+ D T +V+TR
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATR 186
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 19/165 (11%)
Query: 210 LGQGGFGYVHKGVLT-NGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSLVG 265
+G G +G V T G VA+K+L +R ++ E+ ++ + H +++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 266 YCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------IALGSARGLAYLHED 319
F R L E + L HL G D + ++ + RGL Y+H
Sbjct: 89 --VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH-- 142
Query: 320 CQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDT-HVSTR 363
IIHRD+K +N+ +++ E K+ DFGLA+H+ D T V+TR
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVATR 186
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 73/165 (44%), Gaps = 10/165 (6%)
Query: 203 NFSEANLLGQGGFGYV----HKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEII-SQVHH 257
+F ++G+G FG V HK V +++ + E+ +E ++ V H
Sbjct: 39 DFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKH 98
Query: 258 RHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLH 317
LV L + V +++ L +HL ++R + P A A L YLH
Sbjct: 99 PFLVGLHFSFQTADKLYFVLDYINGGELFYHLQ-RERCFLE-PRARFYAAEIASALGYLH 156
Query: 318 EDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTHVST 362
I++RD+K NILLD + DFGL K +++ ++ ST
Sbjct: 157 ---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTST 198
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 74/158 (46%), Gaps = 11/158 (6%)
Query: 198 KIATDNFSEANLLGQGGFGYVHKGV--LTNGKVVAIKQL---KAGSGQGEREFQAEIEII 252
++ ++ + LG G FG V G LT G VA+K L K S + + EI+ +
Sbjct: 12 RVKIGHYILGDTLGVGTFGKVKVGKHELT-GHKVAVKILNRQKIRSLDVVGKIRREIQNL 70
Query: 253 SQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARG 312
H H++ L + S +V E+V L ++ R R+ + S G
Sbjct: 71 KLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILS--G 128
Query: 313 LAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
+ Y H + ++HRD+K N+LLD AK+ADFGL+
Sbjct: 129 VDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLS 163
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 83/164 (50%), Gaps = 8/164 (4%)
Query: 197 LKIATDNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAG-SGQGEREFQAEIEI-IS 253
+++ D+ LG+G +G V K + +G+++A+K+++A + Q ++ +++I +
Sbjct: 2 MEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMR 61
Query: 254 QVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRM--KIALGSAR 311
V V+ G + E + +F+ D+ P + KIA+ +
Sbjct: 62 TVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKG-QTIPEDILGKIAVSIVK 120
Query: 312 GLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLD 355
L +LH + +IHRD+K +N+L++ + K+ DFG++ + +D
Sbjct: 121 ALEHLHS--KLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVD 162
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 69/154 (44%), Gaps = 7/154 (4%)
Query: 202 DNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHL 260
D++ LG G FG VH+ G A K + + + EI+ +S + H L
Sbjct: 51 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 110
Query: 261 VSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDC 320
V+L ++ +++YEF+ L F + M+ ++ +GL ++HE+
Sbjct: 111 VNLHDAFEDDNEMVMIYEFMSGGEL-FEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN- 168
Query: 321 QPKIIHRDIKSANILL--DDSFEAKVADFGLAKH 352
+H D+K NI+ S E K+ DFGL H
Sbjct: 169 --NYVHLDLKPENIMFTTKRSNELKLIDFGLTAH 200
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 71/157 (45%), Gaps = 9/157 (5%)
Query: 201 TDNFSEANLLGQGGFGYVHKGVLTNGK-VVAIKQLKAGSGQGE---REFQAEIEIISQVH 256
D+F LG+G FG V+ +VA+K L + E + + EIEI + +H
Sbjct: 22 IDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLH 81
Query: 257 HRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYL 316
H +++ L Y + L+ E+ P L L + + I A L Y
Sbjct: 82 HPNILRLYNYFYDRRRIYLILEYAPRGELYKEL--QKSCTFDEQRTATIMEELADALMYC 139
Query: 317 HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHS 353
H K+IHRDIK N+LL E K+ADFG + H+
Sbjct: 140 H---GKKVIHRDIKPENLLLGLKGELKIADFGWSVHA 173
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 79/165 (47%), Gaps = 19/165 (11%)
Query: 210 LGQGGFGYVHKGVLT-NGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSLVG 265
+G G +G V T G VA+K+L +R ++ E+ ++ + H +++ L+
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 111
Query: 266 YCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------IALGSARGLAYLHED 319
F R L E + L HL G D + ++ + RGL Y+H
Sbjct: 112 --VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH-- 165
Query: 320 CQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLD-TDTHVSTR 363
IIHRD+K +N+ +++ E K+ DFGLA+H+ D +V+TR
Sbjct: 166 -SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATR 209
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 79/165 (47%), Gaps = 19/165 (11%)
Query: 210 LGQGGFGYVHKGVLT-NGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSLVG 265
+G G +G V T G VA+K+L +R ++ E+ ++ + H +++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 266 YCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------IALGSARGLAYLHED 319
F R L E + L HL G D + ++ + RGL Y+H
Sbjct: 89 --VFTPARSL--EEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGLKYIH-- 142
Query: 320 CQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDT-HVSTR 363
IIHRD+K +N+ +++ E K+ DFGL +H+ D T +V+TR
Sbjct: 143 -SADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATR 186
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 69/154 (44%), Gaps = 7/154 (4%)
Query: 202 DNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHL 260
D++ LG G FG VH+ G A K + + + EI+ +S + H L
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 216
Query: 261 VSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDC 320
V+L ++ +++YEF+ L F + M+ ++ +GL ++HE+
Sbjct: 217 VNLHDAFEDDNEMVMIYEFMSGGEL-FEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN- 274
Query: 321 QPKIIHRDIKSANILL--DDSFEAKVADFGLAKH 352
+H D+K NI+ S E K+ DFGL H
Sbjct: 275 --NYVHLDLKPENIMFTTKRSNELKLIDFGLTAH 306
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 85/179 (47%), Gaps = 19/179 (10%)
Query: 201 TDNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGER---EFQAEIEIISQVH 256
+D + +LG GG VH L + VA+K L+A + F+ E + + ++
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 257 HRHLVSLVGYCTFGSQR------LLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSA 310
H +V++ Y T ++ +V E+V TL +H + M +++ +
Sbjct: 71 HPAIVAV--YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP--MTPKRAIEVIADAC 126
Query: 311 RGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTHV--STRVMGT 367
+ L + H Q IIHRD+K ANI++ + KV DFG+A+ D+ V + V+GT
Sbjct: 127 QALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGT 182
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 74/156 (47%), Gaps = 18/156 (11%)
Query: 210 LGQGGFGYVHKGVLT-NGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSLVG 265
+G G +G V T G VA+K+L +R ++ E+ ++ + H +++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 266 YCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------IALGSARGLAYLHED 319
F R L E + L HL G D + ++ + RGL Y+H
Sbjct: 89 --VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH-- 142
Query: 320 CQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLD 355
IIHRD+K +N+ +++ E K+ DFGLA+H+ D
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 177
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 74/156 (47%), Gaps = 18/156 (11%)
Query: 210 LGQGGFGYVHKGVLT-NGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSLVG 265
+G G +G V T G VA+K+L +R ++ E+ ++ + H +++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 266 YCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------IALGSARGLAYLHED 319
F R L E + L HL G D + ++ + RGL Y+H
Sbjct: 89 --VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH-- 142
Query: 320 CQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLD 355
IIHRD+K +N+ +++ E K+ DFGLA+H+ D
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 177
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 74/156 (47%), Gaps = 18/156 (11%)
Query: 210 LGQGGFGYVHKGVLT-NGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSLVG 265
+G G +G V T G VA+K+L +R ++ E+ ++ + H +++ L+
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 84
Query: 266 YCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------IALGSARGLAYLHED 319
F R L E + L HL G D + ++ + RGL Y+H
Sbjct: 85 --VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH-- 138
Query: 320 CQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLD 355
IIHRD+K +N+ +++ E K+ DFGLA+H+ D
Sbjct: 139 -SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 173
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 72/153 (47%), Gaps = 20/153 (13%)
Query: 210 LGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLVGYCTF 269
+G+G +G V G G+ VA+K E + E EI V RH +++G+
Sbjct: 45 IGKGRYGEVWMGKW-RGEKVAVKVFFTTE---EASWFRETEIYQTVLMRH-ENILGFIAA 99
Query: 270 G-------SQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDC-- 320
+Q L+ ++ N +L +L ++ + +K+A S GL +LH +
Sbjct: 100 DIKGTGSWTQLYLITDYHENGSLYDYLKS---TTLDAKSMLKLAYSSVSGLCHLHTEIFS 156
Query: 321 ---QPKIIHRDIKSANILLDDSFEAKVADFGLA 350
+P I HRD+KS NIL+ + +AD GLA
Sbjct: 157 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 189
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 70/157 (44%), Gaps = 12/157 (7%)
Query: 210 LGQGGFGYVHKGVLT--NGKVV--AIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVS 262
LG G FG V +G +GK V A+K LK + +F E+ + + HR+L+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 263 LVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQP 322
L G ++ V E P +L L K + T + A+ A G+ YL
Sbjct: 86 LYGVVLTPPMKM-VTELAPLGSLLDRLR-KHQGHFLLGTLSRYAVQVAEGMGYLE---SK 140
Query: 323 KIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTH 359
+ IHRD+ + N+LL K+ DFGL + D H
Sbjct: 141 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 177
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 74/156 (47%), Gaps = 18/156 (11%)
Query: 210 LGQGGFGYVHKGVLT-NGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSLVG 265
+G G +G V T G VA+K+L +R ++ E+ ++ + H +++ L+
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 108
Query: 266 YCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------IALGSARGLAYLHED 319
F R L E + L HL G D + ++ + RGL Y+H
Sbjct: 109 --VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH-- 162
Query: 320 CQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLD 355
IIHRD+K +N+ +++ E K+ DFGLA+H+ D
Sbjct: 163 -SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 197
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 70/157 (44%), Gaps = 12/157 (7%)
Query: 210 LGQGGFGYVHKGVLT--NGKVV--AIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVS 262
LG G FG V +G +GK V A+K LK + +F E+ + + HR+L+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 263 LVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQP 322
L G ++ V E P +L L K + T + A+ A G+ YL
Sbjct: 86 LYGVVLTPPMKM-VTELAPLGSLLDRLR-KHQGHFLLGTLSRYAVQVAEGMGYLE---SK 140
Query: 323 KIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTH 359
+ IHRD+ + N+LL K+ DFGL + D H
Sbjct: 141 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 177
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 70/157 (44%), Gaps = 12/157 (7%)
Query: 210 LGQGGFGYVHKGVLT--NGKVV--AIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVS 262
LG G FG V +G +GK V A+K LK + +F E+ + + HR+L+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 263 LVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQP 322
L G ++ V E P +L L K + T + A+ A G+ YL
Sbjct: 80 LYGVVLTPPMKM-VTELAPLGSLLDRLR-KHQGHFLLGTLSRYAVQVAEGMGYLE---SK 134
Query: 323 KIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTH 359
+ IHRD+ + N+LL K+ DFGL + D H
Sbjct: 135 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 171
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 78/185 (42%), Gaps = 27/185 (14%)
Query: 195 EELKIATDNFSEANLLGQGGFGYVHKGVL--TNGKVV--AIKQLKAG--SGQGEREFQAE 248
E++ I F+ +LG+G FG V + L +G V A+K LKA + EF E
Sbjct: 16 EDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLRE 75
Query: 249 IEIISQVHHRHLVSLVGYC--TFGSQRLLVYEFVPNKTLEFHLHGKDRPVM--------- 297
+ + H H+ LVG + RL + P L F HG +
Sbjct: 76 AACMKEFDHPHVAKLVGVSLRSRAKGRLPI----PMVILPFMKHGDLHAFLLASRIGENP 131
Query: 298 -NWP--TRMKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSL 354
N P T ++ + A G+ YL IHRD+ + N +L + VADFGL++
Sbjct: 132 FNLPLQTLVRFMVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIY 188
Query: 355 DTDTH 359
D +
Sbjct: 189 SGDYY 193
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 70/157 (44%), Gaps = 12/157 (7%)
Query: 210 LGQGGFGYVHKGVLT--NGKVV--AIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVS 262
LG G FG V +G +GK V A+K LK + +F E+ + + HR+L+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 263 LVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQP 322
L G ++ V E P +L L K + T + A+ A G+ YL
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLR-KHQGHFLLGTLSRYAVQVAEGMGYLE---SK 130
Query: 323 KIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTH 359
+ IHRD+ + N+LL K+ DFGL + D H
Sbjct: 131 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 167
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 79/165 (47%), Gaps = 19/165 (11%)
Query: 210 LGQGGFGYVHKGVLT-NGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSLVG 265
+G G +G V T G VA+K+L +R ++ E+ ++ + H +++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 266 YCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------IALGSARGLAYLHED 319
F R L E + L HL G D + ++ + RGL Y+H
Sbjct: 89 --VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH-- 142
Query: 320 CQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDT-HVSTR 363
IIHRD+K +N+ +++ E K+ DF LA+H+ D T +V+TR
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVATR 186
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 70/157 (44%), Gaps = 12/157 (7%)
Query: 210 LGQGGFGYVHKGVLT--NGKVV--AIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVS 262
LG G FG V +G +GK V A+K LK + +F E+ + + HR+L+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 263 LVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQP 322
L G ++ V E P +L L K + T + A+ A G+ YL
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLR-KHQGHFLLGTLSRYAVQVAEGMGYLE---SK 130
Query: 323 KIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTH 359
+ IHRD+ + N+LL K+ DFGL + D H
Sbjct: 131 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 167
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 85/179 (47%), Gaps = 19/179 (10%)
Query: 201 TDNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGER---EFQAEIEIISQVH 256
+D + +LG GG VH L + VA+K L+A + F+ E + + ++
Sbjct: 28 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 87
Query: 257 HRHLVSLVGYCTFGSQR------LLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSA 310
H +V++ Y T ++ +V E+V TL +H + M +++ +
Sbjct: 88 HPAIVAV--YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP--MTPKRAIEVIADAC 143
Query: 311 RGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTHV--STRVMGT 367
+ L + H Q IIHRD+K ANI++ + KV DFG+A+ D+ V + V+GT
Sbjct: 144 QALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGT 199
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 80/166 (48%), Gaps = 8/166 (4%)
Query: 195 EELKIATDNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAG-SGQGEREFQAEIEII 252
E ++ D+ LG+G +G V K + +G++ A+K+++A + Q ++ +++I
Sbjct: 27 ENFEVKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDIS 86
Query: 253 SQ-VHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRM--KIALGS 309
+ V V+ G + E +F+ D+ P + KIA+
Sbjct: 87 XRTVDCPFTVTFYGALFREGDVWICXELXDTSLDKFYKQVIDKG-QTIPEDILGKIAVSI 145
Query: 310 ARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLD 355
+ L +LH + +IHRD+K +N+L++ + K DFG++ + +D
Sbjct: 146 VKALEHLHS--KLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVD 189
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 70/157 (44%), Gaps = 12/157 (7%)
Query: 210 LGQGGFGYVHKGVLT--NGKVV--AIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVS 262
LG G FG V +G +GK V A+K LK + +F E+ + + HR+L+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 263 LVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQP 322
L G ++ V E P +L L K + T + A+ A G+ YL
Sbjct: 80 LYGVVLTPPMKM-VTELAPLGSLLDRLR-KHQGHFLLGTLSRYAVQVAEGMGYLE---SK 134
Query: 323 KIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTH 359
+ IHRD+ + N+LL K+ DFGL + D H
Sbjct: 135 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 171
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 82/186 (44%), Gaps = 26/186 (13%)
Query: 195 EELKIATDNFSEANLLGQGGFGYVHKGVL------TNGKVVAIKQLK-AGSGQGEREFQA 247
+E+ ++ F E LG+ FG V+KG L + VAIK LK G EF+
Sbjct: 4 KEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRH 61
Query: 248 EIEIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGK-----------DRPV 296
E + +++ H ++V L+G T +++ + + L L + DR V
Sbjct: 62 EAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTV 121
Query: 297 ---MNWPTRMKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHS 353
+ P + + A G+ YL ++H+D+ + N+L+ D K++D GL +
Sbjct: 122 KSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREV 178
Query: 354 LDTDTH 359
D +
Sbjct: 179 YAADYY 184
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 79/165 (47%), Gaps = 19/165 (11%)
Query: 210 LGQGGFGYVHKGVLT-NGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSLVG 265
+G G +G V T G VA+K+L +R ++ E+ ++ + H +++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 266 YCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------IALGSARGLAYLHED 319
F R L E + L HL G D + ++ + RGL Y+H
Sbjct: 89 --VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH-- 142
Query: 320 CQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDT-HVSTR 363
IIHRD+K +N+ +++ E K+ FGLA+H+ D T +V+TR
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATR 186
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 68/164 (41%), Gaps = 15/164 (9%)
Query: 198 KIATDNFSEANLLGQGGFGYVHKGVLT----NGKVVAIKQLKAGSGQGEREFQ---AEIE 250
K+ ++F LLG+G FG K +L G+ A+K L+ + E E
Sbjct: 1 KVTMNDFDYLKLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESR 57
Query: 251 IISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSA 310
++ H L +L + V E+ L FHL ++R R A
Sbjct: 58 VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-SRERVFTEERARFYGA-EIV 115
Query: 311 RGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSL 354
L YLH +++RDIK N++LD K+ DFGL K +
Sbjct: 116 SALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI 156
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 70/157 (44%), Gaps = 12/157 (7%)
Query: 210 LGQGGFGYVHKGVLT--NGKVV--AIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVS 262
LG G FG V +G +GK V A+K LK + +F E+ + + HR+L+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 263 LVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQP 322
L G ++ V E P +L L K + T + A+ A G+ YL
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLR-KHQGHFLLGTLSRYAVQVAEGMGYLE---SK 130
Query: 323 KIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTH 359
+ IHRD+ + N+LL K+ DFGL + D H
Sbjct: 131 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 167
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 73/158 (46%), Gaps = 22/158 (13%)
Query: 203 NFSEANLLGQGGFGYVH--KGVLTNGKVVAIK-----QLKAGSGQGEREFQAEIEIISQV 255
N+ +G+G F V + +LT GK VA+K QL + S Q + E+ I+ +
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQ---KLFREVRIMKVL 70
Query: 256 HHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHL--HGKDRPVMNWPTRMKIALGSARGL 313
+H ++V L LV E+ + +L HG+ + K A R +
Sbjct: 71 NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--------MKEKEARAKFRQI 122
Query: 314 AYLHEDCQPK-IIHRDIKSANILLDDSFEAKVADFGLA 350
+ C K I+HRD+K+ N+LLD K+ADFG +
Sbjct: 123 VSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 79/160 (49%), Gaps = 18/160 (11%)
Query: 201 TDNFSEANLLGQGGFGYVHKGVLT-NGKVVAIKQLKAGSGQ--GEREFQAEIEIISQVHH 257
+ +F +LLG+G +G V G++VAIK+++ R + EI+I+ H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILKHFKH 68
Query: 258 RHLVSLVGYCTFGSQRLLVYE-----FVPNKTLEFHLHGKDRPVMNWPTRMKIAL-GSAR 311
+++++ F QR +E ++ + ++ LH M ++ + + R
Sbjct: 69 ENIITI-----FNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLR 123
Query: 312 GLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ LH +IHRD+K +N+L++ + + KV DFGLA+
Sbjct: 124 AVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLAR 160
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 79/160 (49%), Gaps = 18/160 (11%)
Query: 201 TDNFSEANLLGQGGFGYVHKGVLT-NGKVVAIKQLKAGSGQ--GEREFQAEIEIISQVHH 257
+ +F +LLG+G +G V G++VAIK+++ R + EI+I+ H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILKHFKH 68
Query: 258 RHLVSLVGYCTFGSQRLLVYE-----FVPNKTLEFHLHGKDRPVMNWPTRMKIAL-GSAR 311
+++++ F QR +E ++ + ++ LH M ++ + + R
Sbjct: 69 ENIITI-----FNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLR 123
Query: 312 GLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ LH +IHRD+K +N+L++ + + KV DFGLA+
Sbjct: 124 AVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLAR 160
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 68/164 (41%), Gaps = 15/164 (9%)
Query: 198 KIATDNFSEANLLGQGGFGYVHKGVLT----NGKVVAIKQLKAGSGQGEREFQ---AEIE 250
K+ ++F LLG+G FG K +L G+ A+K L+ + E E
Sbjct: 1 KVTMNDFDYLKLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESR 57
Query: 251 IISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSA 310
++ H L +L + V E+ L FHL ++R R A
Sbjct: 58 VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-SRERVFTEERARFYGA-EIV 115
Query: 311 RGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSL 354
L YLH +++RDIK N++LD K+ DFGL K +
Sbjct: 116 SALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI 156
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 73/158 (46%), Gaps = 22/158 (13%)
Query: 203 NFSEANLLGQGGFGYVH--KGVLTNGKVVAIK-----QLKAGSGQGEREFQAEIEIISQV 255
N+ +G+G F V + +LT GK VA+K QL + S Q + E+ I+ +
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQ---KLFREVRIMKVL 70
Query: 256 HHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHL--HGKDRPVMNWPTRMKIALGSARGL 313
+H ++V L LV E+ + +L HG+ + K A R +
Sbjct: 71 NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--------MKEKEARAKFRQI 122
Query: 314 AYLHEDCQPK-IIHRDIKSANILLDDSFEAKVADFGLA 350
+ C K I+HRD+K+ N+LLD K+ADFG +
Sbjct: 123 VSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 79/165 (47%), Gaps = 19/165 (11%)
Query: 210 LGQGGFGYVHKGVLT-NGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSLVG 265
+G G +G V T G VA+K+L +R ++ E+ ++ + H +++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 266 YCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------IALGSARGLAYLHED 319
F R L E + L HL G D + ++ + RGL Y+H
Sbjct: 89 --VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH-- 142
Query: 320 CQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDT-HVSTR 363
IIHRD+K +N+ +++ E K+ D GLA+H+ D T +V+TR
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATR 186
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 73/158 (46%), Gaps = 22/158 (13%)
Query: 203 NFSEANLLGQGGFGYVH--KGVLTNGKVVAIK-----QLKAGSGQGEREFQAEIEIISQV 255
N+ +G+G F V + +LT GK VA+K QL + S Q + E+ I+ +
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQ---KLFREVRIMKVL 70
Query: 256 HHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHL--HGKDRPVMNWPTRMKIALGSARGL 313
+H ++V L LV E+ + +L HG+ + K A R +
Sbjct: 71 NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--------MKEKEARAKFRQI 122
Query: 314 AYLHEDCQPK-IIHRDIKSANILLDDSFEAKVADFGLA 350
+ C K I+HRD+K+ N+LLD K+ADFG +
Sbjct: 123 VSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 79/160 (49%), Gaps = 18/160 (11%)
Query: 201 TDNFSEANLLGQGGFGYVHKGVLT-NGKVVAIKQLKAGSGQ--GEREFQAEIEIISQVHH 257
+ +F +LLG+G +G V G++VAIK+++ R + EI+I+ H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILKHFKH 68
Query: 258 RHLVSLVGYCTFGSQRLLVYE-----FVPNKTLEFHLHGKDRPVMNWPTRMKIAL-GSAR 311
+++++ F QR +E ++ + ++ LH M ++ + + R
Sbjct: 69 ENIITI-----FNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLR 123
Query: 312 GLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
+ LH +IHRD+K +N+L++ + + KV DFGLA+
Sbjct: 124 AVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLAR 160
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 68/164 (41%), Gaps = 15/164 (9%)
Query: 198 KIATDNFSEANLLGQGGFGYVHKGVLT----NGKVVAIKQLKAGSGQGEREFQ---AEIE 250
K+ ++F LLG+G FG K +L G+ A+K L+ + E E
Sbjct: 4 KVTMNDFDYLKLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESR 60
Query: 251 IISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSA 310
++ H L +L + V E+ L FHL ++R R A
Sbjct: 61 VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-SRERVFTEERARFYGA-EIV 118
Query: 311 RGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSL 354
L YLH +++RDIK N++LD K+ DFGL K +
Sbjct: 119 SALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI 159
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 68/164 (41%), Gaps = 15/164 (9%)
Query: 198 KIATDNFSEANLLGQGGFGYVHKGVLT----NGKVVAIKQLKAGSGQGEREFQ---AEIE 250
K+ ++F LLG+G FG K +L G+ A+K L+ + E E
Sbjct: 1 KVTMNDFDYLKLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESR 57
Query: 251 IISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSA 310
++ H L +L + V E+ L FHL ++R R A
Sbjct: 58 VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-SRERVFTEERARFYGA-EIV 115
Query: 311 RGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSL 354
L YLH +++RDIK N++LD K+ DFGL K +
Sbjct: 116 SALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI 156
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 68/164 (41%), Gaps = 15/164 (9%)
Query: 198 KIATDNFSEANLLGQGGFGYVHKGVLT----NGKVVAIKQLKAGSGQGEREFQ---AEIE 250
K+ ++F LLG+G FG K +L G+ A+K L+ + E E
Sbjct: 1 KVTMNDFDYLKLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESR 57
Query: 251 IISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSA 310
++ H L +L + V E+ L FHL ++R R A
Sbjct: 58 VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-SRERVFTEERARFYGA-EIV 115
Query: 311 RGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSL 354
L YLH +++RDIK N++LD K+ DFGL K +
Sbjct: 116 SALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI 156
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 79/165 (47%), Gaps = 19/165 (11%)
Query: 210 LGQGGFGYVHKGVLT-NGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSLVG 265
+G G +G V T G VA+K+L +R ++ E+ ++ + H +++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 266 YCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------IALGSARGLAYLHED 319
F R L E + L HL G D + ++ + RGL Y+H
Sbjct: 89 --VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH-- 142
Query: 320 CQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDT-HVSTR 363
IIHRD+K +N+ +++ E K+ D GLA+H+ D T +V+TR
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATR 186
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 70/162 (43%), Gaps = 18/162 (11%)
Query: 202 DNFSEANLLGQGGFGYVHKGVLTNG------KVVAIKQLKAGSGQGEREFQAEIEIISQV 255
D + ++G+G F V + + K+V + + + G + + E I +
Sbjct: 24 DVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 256 HHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSAR---- 311
H H+V L+ + +V+EF+ L F + R + +A R
Sbjct: 84 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEI--VKRADAGFVYSEAVASHYMRQILE 141
Query: 312 GLAYLHEDCQPKIIHRDIKSANILL---DDSFEAKVADFGLA 350
L Y H++ IIHRD+K N+LL ++S K+ DFG+A
Sbjct: 142 ALRYCHDN---NIIHRDVKPENVLLASKENSAPVKLGDFGVA 180
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 68/164 (41%), Gaps = 15/164 (9%)
Query: 198 KIATDNFSEANLLGQGGFGYVHKGVLT----NGKVVAIKQLKAGSGQGEREFQ---AEIE 250
K+ ++F LLG+G FG K +L G+ A+K L+ + E E
Sbjct: 6 KVTMNDFDYLKLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESR 62
Query: 251 IISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSA 310
++ H L +L + V E+ L FHL ++R R A
Sbjct: 63 VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-SRERVFTEERARFYGA-EIV 120
Query: 311 RGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSL 354
L YLH +++RDIK N++LD K+ DFGL K +
Sbjct: 121 SALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI 161
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 70/156 (44%), Gaps = 7/156 (4%)
Query: 210 LGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLVGYCT 268
+GQG G V+ + + G+ VAI+Q+ + EI ++ + + ++V+ +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 269 FGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRD 328
G + +V E++ +L + M+ + + L +LH + ++IHRD
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALEFLHSN---QVIHRD 141
Query: 329 IKSANILLDDSFEAKVADFGLAKHSLDTDTHVSTRV 364
IKS NILL K+ DFG + ST V
Sbjct: 142 IKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV 177
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 68/164 (41%), Gaps = 15/164 (9%)
Query: 198 KIATDNFSEANLLGQGGFGYVHKGVLT----NGKVVAIKQLKAGSGQGEREFQ---AEIE 250
K+ ++F LLG+G FG K +L G+ A+K L+ + E E
Sbjct: 1 KVTMNDFDYLKLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESR 57
Query: 251 IISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSA 310
++ H L +L + V E+ L FHL ++R R A
Sbjct: 58 VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-SRERVFTEERARFYGA-EIV 115
Query: 311 RGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSL 354
L YLH +++RDIK N++LD K+ DFGL K +
Sbjct: 116 SALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI 156
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 71/155 (45%), Gaps = 12/155 (7%)
Query: 202 DNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQ--GEREFQAEIEIISQVHHR 258
+ + + +G+G +G V K G++VAIK+ ++ EI ++ Q+ H
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHP 62
Query: 259 HLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRM--KIALGSARGLAYL 316
+LV+L+ + LV+E+ + L H DR P + I + + + +
Sbjct: 63 NLVNLLEVFRRKRRLHLVFEYCDHTVL----HELDRYQRGVPEHLVKSITWQTLQAVNFC 118
Query: 317 HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
H + IHRD+K NIL+ K+ DFG A+
Sbjct: 119 H---KHNCIHRDVKPENILITKHSVIKLCDFGFAR 150
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 73/158 (46%), Gaps = 22/158 (13%)
Query: 203 NFSEANLLGQGGFGYVH--KGVLTNGKVVAIK-----QLKAGSGQGEREFQAEIEIISQV 255
N+ +G+G F V + +LT GK VA+K QL + S Q + E+ I+ +
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQ---KLFREVRIMKVL 63
Query: 256 HHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHL--HGKDRPVMNWPTRMKIALGSARGL 313
+H ++V L LV E+ + +L HG W + K A R +
Sbjct: 64 NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG-------W-MKEKEARAKFRQI 115
Query: 314 AYLHEDCQPK-IIHRDIKSANILLDDSFEAKVADFGLA 350
+ C K I+HRD+K+ N+LLD K+ADFG +
Sbjct: 116 VSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS 153
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 79/165 (47%), Gaps = 19/165 (11%)
Query: 210 LGQGGFGYVHKGVLT-NGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSLVG 265
+G G +G V T G VA+K+L +R ++ E+ ++ + H +++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 266 YCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------IALGSARGLAYLHED 319
F R L E + L HL G D + ++ + RGL Y+H
Sbjct: 89 --VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH-- 142
Query: 320 CQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDT-HVSTR 363
IIHRD+K +N+ +++ E K+ D GLA+H+ D T +V+TR
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATR 186
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 77/167 (46%), Gaps = 12/167 (7%)
Query: 195 EELKIATDNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQAEIEIIS 253
E + D F + GQG FG V G + G VAIK++ RE Q ++ ++
Sbjct: 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQI-MQDLA 74
Query: 254 QVHHRHLVSLVGY-CTFGSQRL------LVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIA 306
+HH ++V L Y T G + +V E+VP+ + R V P +K+
Sbjct: 75 VLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVF 134
Query: 307 LGS-ARGLAYLHEDCQPKIIHRDIKSANILLDDSF-EAKVADFGLAK 351
L R + LH + HRDIK N+L++++ K+ DFG AK
Sbjct: 135 LFQLIRSIGCLHLP-SVNVCHRDIKPHNVLVNEADGTLKLCDFGSAK 180
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 73/158 (46%), Gaps = 22/158 (13%)
Query: 203 NFSEANLLGQGGFGYVH--KGVLTNGKVVAIK-----QLKAGSGQGEREFQAEIEIISQV 255
N+ +G+G F V + +LT GK VA++ QL + S Q + E+ I+ +
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILT-GKEVAVRIIDKTQLNSSSLQ---KLFREVRIMKVL 70
Query: 256 HHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHL--HGKDRPVMNWPTRMKIALGSARGL 313
+H ++V L LV E+ + +L HG+ + K A R +
Sbjct: 71 NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--------MKEKEARAKFRQI 122
Query: 314 AYLHEDCQPK-IIHRDIKSANILLDDSFEAKVADFGLA 350
+ C K I+HRD+K+ N+LLD K+ADFG +
Sbjct: 123 VSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 73/158 (46%), Gaps = 22/158 (13%)
Query: 203 NFSEANLLGQGGFGYVH--KGVLTNGKVVAIK-----QLKAGSGQGEREFQAEIEIISQV 255
N+ +G+G F V + +LT GK VA++ QL + S Q + E+ I+ +
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILT-GKEVAVRIIDKTQLNSSSLQ---KLFREVRIMKVL 70
Query: 256 HHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHL--HGKDRPVMNWPTRMKIALGSARGL 313
+H ++V L LV E+ + +L HG+ + K A R +
Sbjct: 71 NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--------MKEKEARAKFRQI 122
Query: 314 AYLHEDCQPK-IIHRDIKSANILLDDSFEAKVADFGLA 350
+ C K I+HRD+K+ N+LLD K+ADFG +
Sbjct: 123 VSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 7/144 (4%)
Query: 210 LGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLVGYCT 268
+GQG G V+ + + G+ VAI+Q+ + EI ++ + + ++V+ +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 269 FGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRD 328
G + +V E++ +L + M+ + + L +LH + ++IHRD
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALEFLHSN---QVIHRD 141
Query: 329 IKSANILLDDSFEAKVADFGLAKH 352
IKS NILL K+ DFG
Sbjct: 142 IKSDNILLGMDGSVKLTDFGFCAQ 165
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 7/144 (4%)
Query: 210 LGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLVGYCT 268
+GQG G V+ + + G+ VAI+Q+ + EI ++ + + ++V+ +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 269 FGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRD 328
G + +V E++ +L + M+ + + L +LH + ++IHRD
Sbjct: 88 VGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQALEFLHSN---QVIHRD 141
Query: 329 IKSANILLDDSFEAKVADFGLAKH 352
IKS NILL K+ DFG
Sbjct: 142 IKSDNILLGMDGSVKLTDFGFCAQ 165
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 7/144 (4%)
Query: 210 LGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLVGYCT 268
+GQG G V+ + + G+ VAI+Q+ + EI ++ + + ++V+ +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 269 FGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRD 328
G + +V E++ +L + M+ + + L +LH + ++IHRD
Sbjct: 89 VGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQALEFLHSN---QVIHRD 142
Query: 329 IKSANILLDDSFEAKVADFGLAKH 352
IKS NILL K+ DFG
Sbjct: 143 IKSDNILLGMDGSVKLTDFGFCAQ 166
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 76/168 (45%), Gaps = 15/168 (8%)
Query: 202 DNFSEANLLGQGGFGYVHKGVLTNG-KVVAIKQLKAGSGQ--GEREFQAEIEIISQVHHR 258
DN+ +L+G+G +GYV+ N K VAIK++ + EI I++++
Sbjct: 28 DNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 87
Query: 259 HLVSLVGYCT----FGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSAR-GL 313
+++ L L + + + L+ P+ +K L + G
Sbjct: 88 YIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKT---PIFLTEQHVKTILYNLLLGE 144
Query: 314 AYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKH-SLDTDTHV 360
++HE IIHRD+K AN LL+ K+ DFGLA+ + D D H+
Sbjct: 145 KFIHE---SGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHI 189
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 9/157 (5%)
Query: 198 KIATDNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQL---KAGSGQGEREFQAEIEIIS 253
++ ++ + LG G FG V G G VA+K L K S + + EI+ +
Sbjct: 7 RVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLK 66
Query: 254 QVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGL 313
H H++ L + + +V E+V L ++ R R+ + SA
Sbjct: 67 LFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDY 126
Query: 314 AYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
+ H ++HRD+K N+LLD AK+ADFGL+
Sbjct: 127 CHRH-----MVVHRDLKPENVLLDAHMNAKIADFGLS 158
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 9/157 (5%)
Query: 198 KIATDNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQL---KAGSGQGEREFQAEIEIIS 253
++ ++ + LG G FG V G G VA+K L K S + + EI+ +
Sbjct: 7 RVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLK 66
Query: 254 QVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGL 313
H H++ L + + +V E+V L ++ R R+ + SA
Sbjct: 67 LFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDY 126
Query: 314 AYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
+ H ++HRD+K N+LLD AK+ADFGL+
Sbjct: 127 CHRH-----MVVHRDLKPENVLLDAHMNAKIADFGLS 158
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 55/106 (51%), Gaps = 6/106 (5%)
Query: 248 EIEIISQVH-HRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIA 306
E I+ QV H H+++L+ S LV++ + L +L ++ ++ I
Sbjct: 149 ETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYL--TEKVALSEKETRSIM 206
Query: 307 LGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKH 352
+++LH + I+HRD+K NILLDD+ + +++DFG + H
Sbjct: 207 RSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCH 249
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 73/167 (43%), Gaps = 32/167 (19%)
Query: 202 DNFSEANLLGQGGFGYVHKGVLTNG-KVVAIKQLKAGSGQ--GEREFQAEIEIISQVHHR 258
DN+ +L+G+G +GYV+ N K VAIK++ + EI I++++
Sbjct: 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 85
Query: 259 HLVSLVGYCTFGSQRLLVYEFVPNKTLEFH-----LHGKDR--------PVMNWPTRMKI 305
+++ L +P+ L+F L D P+ +K
Sbjct: 86 YIIRLYDL------------IIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKT 133
Query: 306 ALGSAR-GLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
L + G ++HE IIHRD+K AN LL+ KV DFGLA+
Sbjct: 134 ILYNLLLGENFIHE---SGIIHRDLKPANCLLNQDCSVKVCDFGLAR 177
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 71/158 (44%), Gaps = 23/158 (14%)
Query: 210 LGQGGFGYVHKGVLTN-GKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSL----- 263
LG GG G V V + K VAIK++ Q + EI+II ++ H ++V +
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 264 ---------VGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLA 314
VG T + +V E++ G P++ R+ RGL
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQG---PLLEEHARL-FMYQLLRGLK 134
Query: 315 YLHEDCQPKIIHRDIKSANILLD-DSFEAKVADFGLAK 351
Y+H ++HRD+K AN+ ++ + K+ DFGLA+
Sbjct: 135 YIH---SANVLHRDLKPANLFINTEDLVLKIGDFGLAR 169
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 18/157 (11%)
Query: 204 FSEANLLGQGGFGYVHKGVLTNGKV-VAIKQLKAGSGQ--GEREFQAEIEIISQVHHRHL 260
++ + +G+G +G V KV VAIK++ Q +R + EI+I+ + H ++
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 103
Query: 261 VSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMK------IALGSARGLA 314
+ + R E + + L HL G D + + RGL
Sbjct: 104 IGINDII-----RAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLK 158
Query: 315 YLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
Y+H ++HRD+K +N+LL+ + + K+ DFGLA+
Sbjct: 159 YIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLAR 192
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 11/154 (7%)
Query: 201 TDNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGERE-FQAEIEIISQVHHR 258
+++ LG+G +G V V + VA+K + E + EI I ++H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 259 HLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPT--RMKIALGSARGLAYL 316
++V G+ G+ + L E+ L + P + P + G+ YL
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGG----ELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 317 HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
H I HRDIK N+LLD+ K++DFGLA
Sbjct: 121 H---GIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 11/154 (7%)
Query: 201 TDNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGERE-FQAEIEIISQVHHR 258
+++ LG+G +G V V + VA+K + E + EI I ++H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 259 HLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPT--RMKIALGSARGLAYL 316
++V G+ G+ + L E+ L + P + P + G+ YL
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGG----ELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 317 HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
H I HRDIK N+LLD+ K++DFGLA
Sbjct: 121 H---GIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 82/185 (44%), Gaps = 24/185 (12%)
Query: 198 KIATDNFSEANLLGQGGFGYV--------HKGVLTNGKVVAIKQLKAGS----GQGEREF 245
K+ +NF +LG G +G V H GK+ A+K LK + +
Sbjct: 50 KVGIENFELLKVLGTGAYGKVFLVRKISGHD----TGKLYAMKVLKKATIVQKAKTTEHT 105
Query: 246 QAEIEIISQVHHRHLVSLVGYCTFGSQRL-LVYEFVPNKTLEFHLHGKDRPVMNWPTRMK 304
+ E +++ + + + Y +L L+ +++ L HL ++R + ++
Sbjct: 106 RTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEH---EVQ 162
Query: 305 IALGS-ARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTHVSTR 363
I +G L +LH + II+RDIK NILLD + + DFGL+K + +T +
Sbjct: 163 IYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYD 219
Query: 364 VMGTF 368
GT
Sbjct: 220 FCGTI 224
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 64/133 (48%), Gaps = 25/133 (18%)
Query: 242 EREFQAEIEIISQVHHRHLVSLVGYCTFGSQR--LLVYEFVPNKTLEFHLHGKDRPVMNW 299
E+ +Q EI I+ ++ H ++V LV ++ +V+E V PVM
Sbjct: 81 EQVYQ-EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELV-----------NQGPVMEV 128
Query: 300 PTRMKIALGSAR--------GLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
PT ++ AR G+ YLH KIIHRDIK +N+L+ + K+ADFG++
Sbjct: 129 PTLKPLSEDQARFYFQDLIKGIEYLH---YQKIIHRDIKPSNLLVGEDGHIKIADFGVSN 185
Query: 352 HSLDTDTHVSTRV 364
+D +S V
Sbjct: 186 EFKGSDALLSNTV 198
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 74/160 (46%), Gaps = 14/160 (8%)
Query: 200 ATDNFSEANLLGQGGFGYVHKGVLT-NGKVVAIKQLKAGSGQGEREFQA--EIEIISQVH 256
+ D + LG+G +G V+K + T + VAIK+++ + A E+ ++ ++
Sbjct: 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQ 91
Query: 257 HRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYL 316
HR+++ L + L++E+ N + + P ++ G+ +
Sbjct: 92 HRNIIELKSVIHHNHRLHLIFEYAEN---DLKKYMDKNPDVSMRVIKSFLYQLINGVNFC 148
Query: 317 HEDCQPKIIHRDIKSANILL--DDSFEA---KVADFGLAK 351
H + +HRD+K N+LL D+ E K+ DFGLA+
Sbjct: 149 H---SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 69/149 (46%), Gaps = 16/149 (10%)
Query: 210 LGQGGFGYVH--KGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLVGYC 267
LG+GGF YV +G L +G A+K++ Q E Q E ++ +H +++ LV YC
Sbjct: 37 LGEGGFSYVDLVEG-LHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYC 95
Query: 268 T----FGSQRLLVYEFVPNKTLEFHLHG-KDRPVMNWPTRMKI---ALGSARGLAYLHED 319
+ L+ F TL + KD+ N+ T +I LG RGL +H
Sbjct: 96 LRERGAKHEAWLLLPFFKRGTLWNEIERLKDKG--NFLTEDQILWLLLGICRGLEAIHA- 152
Query: 320 CQPKIIHRDIKSANILLDDSFEAKVADFG 348
HRD+K NILL D + + D G
Sbjct: 153 --KGYAHRDLKPTNILLGDEGQPVLMDLG 179
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 11/154 (7%)
Query: 201 TDNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGERE-FQAEIEIISQVHHR 258
+++ LG+G +G V V + VA+K + E + EI I ++H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 65
Query: 259 HLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPT--RMKIALGSARGLAYL 316
++V G+ G+ + L E+ L + P + P + G+ YL
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGG----ELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 317 HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
H I HRDIK N+LLD+ K++DFGLA
Sbjct: 122 H---GIGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 11/154 (7%)
Query: 201 TDNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGERE-FQAEIEIISQVHHR 258
+++ LG+G +G V V + VA+K + E + EI I ++H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 259 HLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPT--RMKIALGSARGLAYL 316
++V G+ G+ + L E+ L + P + P + G+ YL
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGG----ELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 317 HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
H I HRDIK N+LLD+ K++DFGLA
Sbjct: 122 H---GIGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 11/154 (7%)
Query: 201 TDNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGERE-FQAEIEIISQVHHR 258
+++ LG+G +G V V + VA+K + E + EI I ++H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 259 HLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPT--RMKIALGSARGLAYL 316
++V G+ G+ + L E+ L + P + P + G+ YL
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGG----ELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 317 HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
H I HRDIK N+LLD+ K++DFGLA
Sbjct: 121 H---GIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 10/149 (6%)
Query: 207 ANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVH-HRHLVSLV 264
+ LLG+G + V V L NGK A+K ++ +G E+E + Q +++++ L+
Sbjct: 18 SELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELI 77
Query: 265 GYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQPKI 324
+ ++ LV+E + ++ H+ + N ++ A L +LH I
Sbjct: 78 EFFEDDTRFYLVFEKLQGGSILAHIQKQKH--FNEREASRVVRDVAAALDFLH---TKGI 132
Query: 325 IHRDIKSANILLDDSFE---AKVADFGLA 350
HRD+K NIL + + K+ DF L
Sbjct: 133 AHRDLKPENILCESPEKVSPVKICDFDLG 161
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 72/158 (45%), Gaps = 22/158 (13%)
Query: 203 NFSEANLLGQGGFGYVH--KGVLTNGKVVAIK-----QLKAGSGQGEREFQAEIEIISQV 255
N+ +G+G F V + +LT GK VA+K QL + S Q + E+ I +
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQ---KLFREVRIXKVL 70
Query: 256 HHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHL--HGKDRPVMNWPTRMKIALGSARGL 313
+H ++V L LV E+ + +L HG+ + K A R +
Sbjct: 71 NHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKE--------KEARAKFRQI 122
Query: 314 AYLHEDCQPK-IIHRDIKSANILLDDSFEAKVADFGLA 350
+ C K I+HRD+K+ N+LLD K+ADFG +
Sbjct: 123 VSAVQYCHQKFIVHRDLKAENLLLDADXNIKIADFGFS 160
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 83/175 (47%), Gaps = 20/175 (11%)
Query: 198 KIATDNFSEANLLGQGGFGYVHKGVLTNGK----VVAIKQLKAGSGQGEREFQA---EIE 250
++ +F+ +LG+G FG V +L + K + AIK LK + + + E
Sbjct: 15 RVKLTDFNFLMVLGKGSFGKV---MLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKR 71
Query: 251 IISQVHHRHLVSLVGYCTFGSQRL-LVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGS 309
+++ + ++ + C RL V E+V L +H+ + P + A
Sbjct: 72 VLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGK--FKEPQAVFYAAEI 129
Query: 310 ARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK-HSLDTDTHVSTR 363
+ GL +LH + II+RD+K N++LD K+ADFG+ K H +D V+TR
Sbjct: 130 SIGLFFLH---KRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDG---VTTR 178
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 76/173 (43%), Gaps = 19/173 (10%)
Query: 182 GMPVGNFKSTFTYEELKIATDNFSEANLLGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQG 241
M N + TF + E+ + + FSE L+ Q GK+ A+K +K
Sbjct: 1 SMQTTNIRKTFIFMEV-LGSGAFSEVFLVKQR----------LTGKLFALKCIKKSPAFR 49
Query: 242 EREFQAEIEIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPT 301
+ + EI ++ ++ H ++V+L + LV + V L + +R V
Sbjct: 50 DSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRI--LERGVYTEKD 107
Query: 302 RMKIALGSARGLAYLHEDCQPKIIHRDIKSANILL---DDSFEAKVADFGLAK 351
+ + YLHE+ I+HRD+K N+L +++ + + DFGL+K
Sbjct: 108 ASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSK 157
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 68/154 (44%), Gaps = 11/154 (7%)
Query: 201 TDNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGERE-FQAEIEIISQVHHR 258
+++ LG+G +G V V + VA+K + E + EI I + ++H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHE 65
Query: 259 HLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPT--RMKIALGSARGLAYL 316
++V G+ G+ + L E+ L + P + P + G+ YL
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGG----ELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 317 HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
H I HRDIK N+LLD+ K++DFGLA
Sbjct: 122 H---GIGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 85/187 (45%), Gaps = 39/187 (20%)
Query: 200 ATDNFSEANLLGQGGFGYVHKGVLT----NGKVVAIKQLKAG--SGQGEREFQAEIEIIS 253
+ + + +G+G FG K +L +G+ IK++ S + E + E+ +++
Sbjct: 22 SMEKYVRLQKIGEGSFG---KAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLA 78
Query: 254 QVHHRHLVS-------------LVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWP 300
+ H ++V ++ YC G L K + F ++ +++W
Sbjct: 79 NMKHPNIVQYRESFEENGSLYIVMDYCEGGD---LFKRINAQKGVLF----QEDQILDWF 131
Query: 301 TRMKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTHV 360
++ +AL ++H+ KI+HRDIKS NI L ++ DFG+A+ L++ +
Sbjct: 132 VQICLAL------KHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIAR-VLNSTVEL 181
Query: 361 STRVMGT 367
+ +GT
Sbjct: 182 ARACIGT 188
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 87/195 (44%), Gaps = 48/195 (24%)
Query: 179 QSPGMPVGNFKSTFTYEELKIATDNFSEANLLGQGGFGYV--HKGVLTNG----KVVAIK 232
Q PGM V + + F+ D + +LG+G FG V K +T KV++ +
Sbjct: 17 QGPGMFVQHSTAIFS--------DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKR 68
Query: 233 QLKAGSGQGEREFQAEIEIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGK 292
Q+K + + E++++ Q+ H +++ L YEF +K F+L G+
Sbjct: 69 QVKQKTDK--ESLLREVQLLKQLDHPNIMKL-------------YEFFEDKGY-FYLVGE 112
Query: 293 ------------DRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSF 340
R + +I G+ Y+H++ KI+HRD+K N+LL+
Sbjct: 113 VYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKS 169
Query: 341 E---AKVADFGLAKH 352
+ ++ DFGL+ H
Sbjct: 170 KDANIRIIDFGLSTH 184
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 72/158 (45%), Gaps = 22/158 (13%)
Query: 203 NFSEANLLGQGGFGYVH--KGVLTNGKVVAIK-----QLKAGSGQGEREFQAEIEIISQV 255
N+ +G+G F V + VLT G+ VA+K QL S Q + E+ I+ +
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLT-GREVAVKIIDKTQLNPTSLQ---KLFREVRIMKIL 71
Query: 256 HHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHL--HGKDRPVMNWPTRMKIALGSARGL 313
+H ++V L LV E+ + +L HG+ + K A R +
Sbjct: 72 NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--------MKEKEARAKFRQI 123
Query: 314 AYLHEDCQPK-IIHRDIKSANILLDDSFEAKVADFGLA 350
+ C K I+HRD+K+ N+LLD K+ADFG +
Sbjct: 124 VSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFS 161
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 11/154 (7%)
Query: 201 TDNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGERE-FQAEIEIISQVHHR 258
+++ LG+G +G V V + VA+K + E + EI I ++H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 259 HLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPT--RMKIALGSARGLAYL 316
++V G+ G+ + L E+ L + P + P + G+ YL
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGG----ELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 317 HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
H I HRDIK N+LLD+ K++DFGLA
Sbjct: 122 H---GIGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 11/154 (7%)
Query: 201 TDNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGERE-FQAEIEIISQVHHR 258
+++ LG+G +G V V + VA+K + E + EI I ++H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 259 HLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPT--RMKIALGSARGLAYL 316
++V G+ G+ + L E+ L + P + P + G+ YL
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGG----ELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 317 HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
H I HRDIK N+LLD+ K++DFGLA
Sbjct: 122 H---GIGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 11/154 (7%)
Query: 201 TDNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGERE-FQAEIEIISQVHHR 258
+++ LG+G +G V V + VA+K + E + EI I ++H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 259 HLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPT--RMKIALGSARGLAYL 316
++V G+ G+ + L E+ L + P + P + G+ YL
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGG----ELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 317 HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
H I HRDIK N+LLD+ K++DFGLA
Sbjct: 121 H---GIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 11/154 (7%)
Query: 201 TDNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGERE-FQAEIEIISQVHHR 258
+++ LG+G +G V V + VA+K + E + EI I ++H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 259 HLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPT--RMKIALGSARGLAYL 316
++V G+ G+ + L E+ L + P + P + G+ YL
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGG----ELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 317 HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
H I HRDIK N+LLD+ K++DFGLA
Sbjct: 122 H---GIGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 11/154 (7%)
Query: 201 TDNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGERE-FQAEIEIISQVHHR 258
+++ LG+G +G V V + VA+K + E + EI I ++H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 259 HLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPT--RMKIALGSARGLAYL 316
++V G+ G+ + L E+ L + P + P + G+ YL
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGG----ELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 317 HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
H I HRDIK N+LLD+ K++DFGLA
Sbjct: 121 H---GIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 11/154 (7%)
Query: 201 TDNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGERE-FQAEIEIISQVHHR 258
+++ LG+G +G V V + VA+K + E + EI I ++H
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 63
Query: 259 HLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPT--RMKIALGSARGLAYL 316
++V G+ G+ + L E+ L + P + P + G+ YL
Sbjct: 64 NVVKFYGHRREGNIQYLFLEYCSGG----ELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 119
Query: 317 HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
H I HRDIK N+LLD+ K++DFGLA
Sbjct: 120 H---GIGITHRDIKPENLLLDERDNLKISDFGLA 150
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 11/154 (7%)
Query: 201 TDNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGERE-FQAEIEIISQVHHR 258
+++ LG+G +G V V + VA+K + E + EI I ++H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 259 HLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPT--RMKIALGSARGLAYL 316
++V G+ G+ + L E+ L + P + P + G+ YL
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGG----ELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 317 HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
H I HRDIK N+LLD+ K++DFGLA
Sbjct: 121 H---GIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 71/151 (47%), Gaps = 11/151 (7%)
Query: 203 NFSEANLLGQGGFGYVHKGVLTNGK------VVAIKQLKAGSGQGEREFQAEIEIISQVH 256
+F + N L + H G L G+ VV + +++ S + R+F E +
Sbjct: 8 DFKQLNFLTK--LNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFS 65
Query: 257 HRHLVSLVGYCTF--GSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLA 314
H +++ ++G C L+ ++P +L LH V++ +K AL ARG+A
Sbjct: 66 HPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMA 125
Query: 315 YLHEDCQPKIIHRDIKSANILLDDSFEAKVA 345
+LH +P I + S ++++D+ A+++
Sbjct: 126 FLHT-LEPLIPRHALNSRSVMIDEDMTARIS 155
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 68/164 (41%), Gaps = 14/164 (8%)
Query: 198 KIATDNFSEANLLGQGGFGYVHKGVLTN----GKVVAIKQLKAGSGQGEREFQ---AEIE 250
++ + F LLG+G FG V +L G+ A+K LK + E E
Sbjct: 6 RVTMNEFEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENR 62
Query: 251 IISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSA 310
++ H L +L + V E+ L FHL ++R R A
Sbjct: 63 VLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL-SRERVFSEDRARFYGA-EIV 120
Query: 311 RGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSL 354
L YLH + +++RD+K N++LD K+ DFGL K +
Sbjct: 121 SALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGI 162
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 11/154 (7%)
Query: 201 TDNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGERE-FQAEIEIISQVHHR 258
+++ LG+G +G V V + VA+K + E + EI I ++H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 259 HLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPT--RMKIALGSARGLAYL 316
++V G+ G+ + L E+ L + P + P + G+ YL
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGG----ELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 317 HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
H I HRDIK N+LLD+ K++DFGLA
Sbjct: 122 H---GIGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 11/154 (7%)
Query: 201 TDNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGERE-FQAEIEIISQVHHR 258
+++ LG+G +G V V + VA+K + E + EI I ++H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 259 HLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPT--RMKIALGSARGLAYL 316
++V G+ G+ + L E+ L + P + P + G+ YL
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGG----ELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 317 HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
H I HRDIK N+LLD+ K++DFGLA
Sbjct: 121 H---GIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 74/153 (48%), Gaps = 10/153 (6%)
Query: 204 FSEANLLGQGGFGYVHKGVLTNGKV-VAIKQLKAGSGQ--GEREFQAEIEIISQVHHRHL 260
++ + +G+G +G V KV VAIK++ Q +R + EI+I+ + H ++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 83
Query: 261 VSLVGYCTFGSQRLLVYEFVPNKTLEFHLHG--KDRPVMNWPTRMKIALGSARGLAYLHE 318
+ + + + ++ +E L+ K + + N RGL Y+H
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN-DHICYFLYQILRGLKYIH- 141
Query: 319 DCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
++HRD+K +N+LL+ + + K+ DFGLA+
Sbjct: 142 --SANVLHRDLKPSNLLLNTTCDLKICDFGLAR 172
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 11/154 (7%)
Query: 201 TDNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGERE-FQAEIEIISQVHHR 258
+++ LG+G +G V V + VA+K + E + EI I ++H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 259 HLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPT--RMKIALGSARGLAYL 316
++V G+ G+ + L E+ L + P + P + G+ YL
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGG----ELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 317 HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
H I HRDIK N+LLD+ K++DFGLA
Sbjct: 121 H---GIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 11/154 (7%)
Query: 201 TDNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGERE-FQAEIEIISQVHHR 258
+++ LG+G +G V V + VA+K + E + EI I ++H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 259 HLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPT--RMKIALGSARGLAYL 316
++V G+ G+ + L E+ L + P + P + G+ YL
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGG----ELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 317 HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
H I HRDIK N+LLD+ K++DFGLA
Sbjct: 121 H---GIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 25/164 (15%)
Query: 202 DNFSEANLLGQGGFGYVHKGVL-TNGKVVAIKQLKAG---SGQGEREFQAEIEIISQVHH 257
D + +G G +G V G+ VAIK++ +R + E++I+ H
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLR-ELKILKHFKH 113
Query: 258 RHLVSL-------VGYCTFGSQRLLVYEFVPNKTLEFHLHG---KDRPVMNWPTRMKIAL 307
+++++ V Y F S +V +E LH +P+ R +
Sbjct: 114 DNIIAIKDILRPTVPYGEFKSV------YVVLDLMESDLHQIIHSSQPLTLEHVRYFL-Y 166
Query: 308 GSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
RGL Y+H ++IHRD+K +N+L++++ E K+ DFG+A+
Sbjct: 167 QLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMAR 207
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 73/158 (46%), Gaps = 22/158 (13%)
Query: 203 NFSEANLLGQGGFGYVH--KGVLTNGKVVAIK-----QLKAGSGQGEREFQAEIEIISQV 255
N+ +G+G F V + +LT G+ VAIK QL S Q + E+ I+ +
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILT-GREVAIKIIDKTQLNPTSLQ---KLFREVRIMKIL 68
Query: 256 HHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHL--HGKDRPVMNWPTRMKIALGSARGL 313
+H ++V L L+ E+ + +L HG+ + K A R +
Sbjct: 69 NHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGR--------MKEKEARSKFRQI 120
Query: 314 AYLHEDC-QPKIIHRDIKSANILLDDSFEAKVADFGLA 350
+ C Q +I+HRD+K+ N+LLD K+ADFG +
Sbjct: 121 VSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFS 158
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 74/153 (48%), Gaps = 10/153 (6%)
Query: 204 FSEANLLGQGGFGYVHKGVLTNGKV-VAIKQLKAGSGQ--GEREFQAEIEIISQVHHRHL 260
++ + +G+G +G V KV VAIK++ Q +R + EI+I+ + H ++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 83
Query: 261 VSLVGYCTFGSQRLLVYEFVPNKTLEFHLHG--KDRPVMNWPTRMKIALGSARGLAYLHE 318
+ + + + ++ +E L+ K + + N RGL Y+H
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN-DHICYFLYQILRGLKYIH- 141
Query: 319 DCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
++HRD+K +N+LL+ + + K+ DFGLA+
Sbjct: 142 --SANVLHRDLKPSNLLLNTTXDLKICDFGLAR 172
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 70/156 (44%), Gaps = 7/156 (4%)
Query: 210 LGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLVGYCT 268
+GQG G V+ + + G+ VAI+Q+ + EI ++ + + ++V+ +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 269 FGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRD 328
G + +V E++ +L + M+ + + L +LH + ++IHR+
Sbjct: 89 VGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQALEFLHSN---QVIHRN 142
Query: 329 IKSANILLDDSFEAKVADFGLAKHSLDTDTHVSTRV 364
IKS NILL K+ DFG + ST V
Sbjct: 143 IKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV 178
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 11/154 (7%)
Query: 201 TDNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGERE-FQAEIEIISQVHHR 258
+++ LG+G +G V V + VA+K + E + EI I ++H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 259 HLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPT--RMKIALGSARGLAYL 316
++V G+ G+ + L E+ L + P + P + G+ YL
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGG----ELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 317 HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
H I HRDIK N+LLD+ K++DFGLA
Sbjct: 121 H---GIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 74/153 (48%), Gaps = 10/153 (6%)
Query: 204 FSEANLLGQGGFGYVHKGVLTNGKV-VAIKQLKAGSGQ--GEREFQAEIEIISQVHHRHL 260
++ + +G+G +G V KV VAIK++ Q +R + EI+I+ + H ++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 85
Query: 261 VSLVGYCTFGSQRLLVYEFVPNKTLEFHLHG--KDRPVMNWPTRMKIALGSARGLAYLHE 318
+ + + + ++ +E L+ K + + N RGL Y+H
Sbjct: 86 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN-DHICYFLYQILRGLKYIH- 143
Query: 319 DCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
++HRD+K +N+LL+ + + K+ DFGLA+
Sbjct: 144 --SANVLHRDLKPSNLLLNTTCDLKICDFGLAR 174
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 11/154 (7%)
Query: 201 TDNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGERE-FQAEIEIISQVHHR 258
+++ LG+G +G V V + VA+K + E + EI I ++H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 259 HLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPT--RMKIALGSARGLAYL 316
++V G+ G+ + L E+ L + P + P + G+ YL
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGG----ELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 317 HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
H I HRDIK N+LLD+ K++DFGLA
Sbjct: 122 H---GIGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 68/164 (41%), Gaps = 14/164 (8%)
Query: 198 KIATDNFSEANLLGQGGFGYVHKGVLTN----GKVVAIKQLKAGSGQGEREFQ---AEIE 250
++ + F LLG+G FG V +L G+ A+K LK + E E
Sbjct: 4 RVTMNEFEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENR 60
Query: 251 IISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSA 310
++ H L +L + V E+ L FHL ++R R A
Sbjct: 61 VLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL-SRERVFSEDRARFYGA-EIV 118
Query: 311 RGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSL 354
L YLH + +++RD+K N++LD K+ DFGL K +
Sbjct: 119 SALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGI 160
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 72/147 (48%), Gaps = 12/147 (8%)
Query: 210 LGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQA--EIEIISQVHHRHLVSLVGY 266
+G+G +G V K ++VA+K+++ A EI ++ ++ H+++V L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 267 CTFGSQRLLVYEFVPNKTLEFH--LHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQPKI 324
+ LV+EF ++ +G P + ++ +GL + H +
Sbjct: 70 LHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLL----KGLGFCH---SRNV 122
Query: 325 IHRDIKSANILLDDSFEAKVADFGLAK 351
+HRD+K N+L++ + E K+ADFGLA+
Sbjct: 123 LHRDLKPQNLLINRNGELKLADFGLAR 149
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 68/164 (41%), Gaps = 14/164 (8%)
Query: 198 KIATDNFSEANLLGQGGFGYVHKGVLTN----GKVVAIKQLKAGSGQGEREFQ---AEIE 250
++ + F LLG+G FG V +L G+ A+K LK + E E
Sbjct: 147 RVTMNEFEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENR 203
Query: 251 IISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSA 310
++ H L +L + V E+ L FHL ++R R A
Sbjct: 204 VLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL-SRERVFSEDRARFYGA-EIV 261
Query: 311 RGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSL 354
L YLH + +++RD+K N++LD K+ DFGL K +
Sbjct: 262 SALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGI 303
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 11/154 (7%)
Query: 201 TDNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGERE-FQAEIEIISQVHHR 258
+++ LG+G +G V V + VA+K + E + EI I ++H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 259 HLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPT--RMKIALGSARGLAYL 316
++V G+ G+ + L E+ L + P + P + G+ YL
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGG----ELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 317 HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
H I HRDIK N+LLD+ K++DFGLA
Sbjct: 121 H---GIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 68/164 (41%), Gaps = 14/164 (8%)
Query: 198 KIATDNFSEANLLGQGGFGYVHKGVLT----NGKVVAIKQLKAGSGQGEREFQ---AEIE 250
++ + F LLG+G FG V +L G+ A+K LK + E E
Sbjct: 5 RVTMNEFEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENR 61
Query: 251 IISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSA 310
++ H L +L + V E+ L FHL ++R R A
Sbjct: 62 VLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL-SRERVFSEDRARFYGA-EIV 119
Query: 311 RGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSL 354
L YLH + +++RD+K N++LD K+ DFGL K +
Sbjct: 120 SALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGI 161
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 68/164 (41%), Gaps = 14/164 (8%)
Query: 198 KIATDNFSEANLLGQGGFGYVHKGVLTN----GKVVAIKQLKAGSGQGEREFQ---AEIE 250
++ + F LLG+G FG V +L G+ A+K LK + E E
Sbjct: 144 RVTMNEFEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENR 200
Query: 251 IISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSA 310
++ H L +L + V E+ L FHL ++R R A
Sbjct: 201 VLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL-SRERVFSEDRARFYGA-EIV 258
Query: 311 RGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSL 354
L YLH + +++RD+K N++LD K+ DFGL K +
Sbjct: 259 SALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGI 300
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 73/158 (46%), Gaps = 22/158 (13%)
Query: 203 NFSEANLLGQGGFGYVH--KGVLTNGKVVAIK-----QLKAGSGQGEREFQAEIEIISQV 255
N+ +G+G F V + +LT G+ VAIK QL S Q + E+ I+ +
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILT-GREVAIKIIDKTQLNPTSLQ---KLFREVRIMKIL 71
Query: 256 HHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHL--HGKDRPVMNWPTRMKIALGSARGL 313
+H ++V L L+ E+ + +L HG+ + K A R +
Sbjct: 72 NHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGR--------MKEKEARSKFRQI 123
Query: 314 AYLHEDC-QPKIIHRDIKSANILLDDSFEAKVADFGLA 350
+ C Q +I+HRD+K+ N+LLD K+ADFG +
Sbjct: 124 VSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFS 161
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 76/178 (42%), Gaps = 22/178 (12%)
Query: 195 EELKIATDNFSEANLLGQGGFG---YVHKGVLTNGKVVAIKQL---KAGSGQGEREFQAE 248
E + D+F +G+G FG V K K+ A+K + K R E
Sbjct: 8 ENEDVNFDHFEILRAIGKGSFGKVCIVQKN--DTKKMYAMKYMNKQKCVERNEVRNVFKE 65
Query: 249 IEIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHL----HGKDRPVMNWPTRMK 304
++I+ + H LV+L +V + + L +HL H K+ V + +
Sbjct: 66 LQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELV 125
Query: 305 IALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTHVST 362
+AL YL +IIHRD+K NILLD+ + DF +A L +T ++T
Sbjct: 126 MALD------YLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAA-MLPRETQITT 173
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 74/153 (48%), Gaps = 10/153 (6%)
Query: 204 FSEANLLGQGGFGYVHKGVLTNGKV-VAIKQLKAGSGQ--GEREFQAEIEIISQVHHRHL 260
++ + +G+G +G V KV VAIK++ Q +R + EI+I+ + H ++
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 81
Query: 261 VSLVGYCTFGSQRLLVYEFVPNKTLEFHLHG--KDRPVMNWPTRMKIALGSARGLAYLHE 318
+ + + + ++ +E L+ K + + N RGL Y+H
Sbjct: 82 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN-DHICYFLYQILRGLKYIH- 139
Query: 319 DCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
++HRD+K +N+LL+ + + K+ DFGLA+
Sbjct: 140 --SANVLHRDLKPSNLLLNTTCDLKICDFGLAR 170
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 74/153 (48%), Gaps = 10/153 (6%)
Query: 204 FSEANLLGQGGFGYVHKGVLTNGKV-VAIKQLKAGSGQ--GEREFQAEIEIISQVHHRHL 260
++ + +G+G +G V KV VAIK++ Q +R + EI+I+ + H ++
Sbjct: 33 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 91
Query: 261 VSLVGYCTFGSQRLLVYEFVPNKTLEFHLHG--KDRPVMNWPTRMKIALGSARGLAYLHE 318
+ + + + ++ +E L+ K + + N RGL Y+H
Sbjct: 92 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN-DHICYFLYQILRGLKYIH- 149
Query: 319 DCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
++HRD+K +N+LL+ + + K+ DFGLA+
Sbjct: 150 --SANVLHRDLKPSNLLLNTTCDLKICDFGLAR 180
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 74/153 (48%), Gaps = 10/153 (6%)
Query: 204 FSEANLLGQGGFGYVHKGVLTNGKV-VAIKQLKAGSGQ--GEREFQAEIEIISQVHHRHL 260
++ + +G+G +G V KV VAIK++ Q +R + EI+I+ + H ++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 83
Query: 261 VSLVGYCTFGSQRLLVYEFVPNKTLEFHLHG--KDRPVMNWPTRMKIALGSARGLAYLHE 318
+ + + + ++ +E L+ K + + N RGL Y+H
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN-DHICYFLYQILRGLKYIH- 141
Query: 319 DCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
++HRD+K +N+LL+ + + K+ DFGLA+
Sbjct: 142 --SANVLHRDLKPSNLLLNTTCDLKICDFGLAR 172
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 88/212 (41%), Gaps = 33/212 (15%)
Query: 156 PVSAFNEPLSTSG--SLDSDKPFPRQSPGMPVGNFKSTFT-----YEELKIATDNFSEAN 208
P S N G +L D FP + NF S + +L++ +++
Sbjct: 16 PKSEVNSDCLLDGLDALVYDLDFPALRKNKNIDNFLSRYKDTINKIRDLRMKAEDYEVVK 75
Query: 209 LLGQGGFGYV----HKGVLTNGKVVAIKQLKAGSGQGERE---FQAEIEIISQVHHRHLV 261
++G+G FG V HK + KV A+K L + F E +I++ + +V
Sbjct: 76 VIGRGAFGEVQLVRHK---STRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVV 132
Query: 262 SLVGYCTFGSQRLL--VYEFVPNKTLEFHLHGKDRP---VMNWPTRMKIALGSARGLAYL 316
L + F R L V E++P L + D P + + +AL + + +
Sbjct: 133 QL--FYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGF- 189
Query: 317 HEDCQPKIIHRDIKSANILLDDSFEAKVADFG 348
IHRD+K N+LLD S K+ADFG
Sbjct: 190 --------IHRDVKPDNMLLDKSGHLKLADFG 213
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 74/153 (48%), Gaps = 10/153 (6%)
Query: 204 FSEANLLGQGGFGYVHKGVLTNGKV-VAIKQLKAGSGQ--GEREFQAEIEIISQVHHRHL 260
++ + +G+G +G V KV VAIK++ Q +R + EI+I+ + H ++
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 103
Query: 261 VSLVGYCTFGSQRLLVYEFVPNKTLEFHLHG--KDRPVMNWPTRMKIALGSARGLAYLHE 318
+ + + + ++ +E L+ K + + N RGL Y+H
Sbjct: 104 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN-DHICYFLYQILRGLKYIH- 161
Query: 319 DCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
++HRD+K +N+LL+ + + K+ DFGLA+
Sbjct: 162 --SANVLHRDLKPSNLLLNTTCDLKICDFGLAR 192
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 74/153 (48%), Gaps = 10/153 (6%)
Query: 204 FSEANLLGQGGFGYVHKGVLTNGKV-VAIKQLKAGSGQ--GEREFQAEIEIISQVHHRHL 260
++ + +G+G +G V KV VAIK++ Q +R + EI+I+ + H ++
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 81
Query: 261 VSLVGYCTFGSQRLLVYEFVPNKTLEFHLHG--KDRPVMNWPTRMKIALGSARGLAYLHE 318
+ + + + ++ +E L+ K + + N RGL Y+H
Sbjct: 82 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN-DHICYFLYQILRGLKYIH- 139
Query: 319 DCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
++HRD+K +N+LL+ + + K+ DFGLA+
Sbjct: 140 --SANVLHRDLKPSNLLLNTTCDLKICDFGLAR 170
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 74/153 (48%), Gaps = 10/153 (6%)
Query: 204 FSEANLLGQGGFGYVHKGVLTNGKV-VAIKQLKAGSGQ--GEREFQAEIEIISQVHHRHL 260
++ + +G+G +G V KV VAIK++ Q +R + EI+I+ + H ++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 83
Query: 261 VSLVGYCTFGSQRLLVYEFVPNKTLEFHLHG--KDRPVMNWPTRMKIALGSARGLAYLHE 318
+ + + + ++ +E L+ K + + N RGL Y+H
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN-DHICYFLYQILRGLKYIH- 141
Query: 319 DCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
++HRD+K +N+LL+ + + K+ DFGLA+
Sbjct: 142 --SANVLHRDLKPSNLLLNTTXDLKICDFGLAR 172
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 74/153 (48%), Gaps = 10/153 (6%)
Query: 204 FSEANLLGQGGFGYVHKGVLTNGKV-VAIKQLKAGSGQ--GEREFQAEIEIISQVHHRHL 260
++ + +G+G +G V KV VAIK++ Q +R + EI+I+ + H ++
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 88
Query: 261 VSLVGYCTFGSQRLLVYEFVPNKTLEFHLHG--KDRPVMNWPTRMKIALGSARGLAYLHE 318
+ + + + ++ +E L+ K + + N RGL Y+H
Sbjct: 89 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN-DHICYFLYQILRGLKYIH- 146
Query: 319 DCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
++HRD+K +N+LL+ + + K+ DFGLA+
Sbjct: 147 --SANVLHRDLKPSNLLLNTTCDLKICDFGLAR 177
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 74/153 (48%), Gaps = 10/153 (6%)
Query: 204 FSEANLLGQGGFGYVHKGVLTNGKV-VAIKQLKAGSGQ--GEREFQAEIEIISQVHHRHL 260
++ + +G+G +G V KV VAIK++ Q +R + EI+I+ + H ++
Sbjct: 31 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 89
Query: 261 VSLVGYCTFGSQRLLVYEFVPNKTLEFHLHG--KDRPVMNWPTRMKIALGSARGLAYLHE 318
+ + + + ++ +E L+ K + + N RGL Y+H
Sbjct: 90 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN-DHICYFLYQILRGLKYIH- 147
Query: 319 DCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
++HRD+K +N+LL+ + + K+ DFGLA+
Sbjct: 148 --SANVLHRDLKPSNLLLNTTCDLKICDFGLAR 178
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 74/153 (48%), Gaps = 10/153 (6%)
Query: 204 FSEANLLGQGGFGYVHKGVLTNGKV-VAIKQLKAGSGQ--GEREFQAEIEIISQVHHRHL 260
++ + +G+G +G V KV VAIK++ Q +R + EI+I+ + H ++
Sbjct: 22 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 80
Query: 261 VSLVGYCTFGSQRLLVYEFVPNKTLEFHLHG--KDRPVMNWPTRMKIALGSARGLAYLHE 318
+ + + + ++ +E L+ K + + N RGL Y+H
Sbjct: 81 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN-DHICYFLYQILRGLKYIH- 138
Query: 319 DCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
++HRD+K +N+LL+ + + K+ DFGLA+
Sbjct: 139 --SANVLHRDLKPSNLLLNTTCDLKICDFGLAR 169
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 74/153 (48%), Gaps = 10/153 (6%)
Query: 204 FSEANLLGQGGFGYVHKGVLTNGKV-VAIKQLKAGSGQ--GEREFQAEIEIISQVHHRHL 260
++ + +G+G +G V KV VAIK++ Q +R + EI+I+ + H ++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 87
Query: 261 VSLVGYCTFGSQRLLVYEFVPNKTLEFHLHG--KDRPVMNWPTRMKIALGSARGLAYLHE 318
+ + + + ++ +E L+ K + + N RGL Y+H
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN-DHICYFLYQILRGLKYIH- 145
Query: 319 DCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
++HRD+K +N+LL+ + + K+ DFGLA+
Sbjct: 146 --SANVLHRDLKPSNLLLNTTCDLKICDFGLAR 176
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 88/212 (41%), Gaps = 33/212 (15%)
Query: 156 PVSAFNEPLSTSG--SLDSDKPFPRQSPGMPVGNFKSTFT-----YEELKIATDNFSEAN 208
P S N G +L D FP + NF S + +L++ +++
Sbjct: 21 PKSEVNSDCLLDGLDALVYDLDFPALRKNKNIDNFLSRYKDTINKIRDLRMKAEDYEVVK 80
Query: 209 LLGQGGFGYV----HKGVLTNGKVVAIKQLKAGSGQGERE---FQAEIEIISQVHHRHLV 261
++G+G FG V HK + KV A+K L + F E +I++ + +V
Sbjct: 81 VIGRGAFGEVQLVRHK---STRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVV 137
Query: 262 SLVGYCTFGSQRLL--VYEFVPNKTLEFHLHGKDRP---VMNWPTRMKIALGSARGLAYL 316
L + F R L V E++P L + D P + + +AL + + +
Sbjct: 138 QL--FYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGF- 194
Query: 317 HEDCQPKIIHRDIKSANILLDDSFEAKVADFG 348
IHRD+K N+LLD S K+ADFG
Sbjct: 195 --------IHRDVKPDNMLLDKSGHLKLADFG 218
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 74/153 (48%), Gaps = 10/153 (6%)
Query: 204 FSEANLLGQGGFGYVHKGVLTNGKV-VAIKQLKAGSGQ--GEREFQAEIEIISQVHHRHL 260
++ + +G+G +G V KV VAIK++ Q +R + EI+I+ + H ++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 87
Query: 261 VSLVGYCTFGSQRLLVYEFVPNKTLEFHLHG--KDRPVMNWPTRMKIALGSARGLAYLHE 318
+ + + + ++ +E L+ K + + N RGL Y+H
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN-DHICYFLYQILRGLKYIH- 145
Query: 319 DCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
++HRD+K +N+LL+ + + K+ DFGLA+
Sbjct: 146 --SANVLHRDLKPSNLLLNTTCDLKICDFGLAR 176
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 74/153 (48%), Gaps = 10/153 (6%)
Query: 204 FSEANLLGQGGFGYVHKGVLTNGKV-VAIKQLKAGSGQ--GEREFQAEIEIISQVHHRHL 260
++ + +G+G +G V KV VAIK++ Q +R + EI+I+ + H ++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 87
Query: 261 VSLVGYCTFGSQRLLVYEFVPNKTLEFHLHG--KDRPVMNWPTRMKIALGSARGLAYLHE 318
+ + + + ++ +E L+ K + + N RGL Y+H
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN-DHICYFLYQILRGLKYIH- 145
Query: 319 DCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
++HRD+K +N+LL+ + + K+ DFGLA+
Sbjct: 146 --SANVLHRDLKPSNLLLNTTXDLKICDFGLAR 176
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 74/153 (48%), Gaps = 10/153 (6%)
Query: 204 FSEANLLGQGGFGYVHKGVLTNGKV-VAIKQLKAGSGQ--GEREFQAEIEIISQVHHRHL 260
++ + +G+G +G V KV VAIK++ Q +R + EI+I+ + H ++
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 88
Query: 261 VSLVGYCTFGSQRLLVYEFVPNKTLEFHLHG--KDRPVMNWPTRMKIALGSARGLAYLHE 318
+ + + + ++ +E L+ K + + N RGL Y+H
Sbjct: 89 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN-DHICYFLYQILRGLKYIH- 146
Query: 319 DCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
++HRD+K +N+LL+ + + K+ DFGLA+
Sbjct: 147 --SANVLHRDLKPSNLLLNTTCDLKICDFGLAR 177
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 70/161 (43%), Gaps = 10/161 (6%)
Query: 199 IATDNFSEANLLGQGGFGYVHKGVLT-NGKVVAIKQLKAGSGQGEREF---QAEIEIISQ 254
+ +F ++G+G + V L ++ A+K +K + + Q E + Q
Sbjct: 6 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 65
Query: 255 V-HHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGL 313
+H LV L S+ V E+V L FH+ + R + R A S L
Sbjct: 66 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQ-RQRKLPEEHARFYSAEISL-AL 123
Query: 314 AYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSL 354
YLHE II+RD+K N+LLD K+ D+G+ K L
Sbjct: 124 NYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 161
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 25/164 (15%)
Query: 202 DNFSEANLLGQGGFGYVHKGVL-TNGKVVAIKQLKAG---SGQGEREFQAEIEIISQVHH 257
D + +G G +G V G+ VAIK++ +R + E++I+ H
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLR-ELKILKHFKH 112
Query: 258 RHLVSL-------VGYCTFGSQRLLVYEFVPNKTLEFHLHG---KDRPVMNWPTRMKIAL 307
+++++ V Y F S +V +E LH +P+ R +
Sbjct: 113 DNIIAIKDILRPTVPYGEFKSV------YVVLDLMESDLHQIIHSSQPLTLEHVRYFL-Y 165
Query: 308 GSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
RGL Y+H ++IHRD+K +N+L++++ E K+ DFG+A+
Sbjct: 166 QLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMAR 206
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 88/212 (41%), Gaps = 33/212 (15%)
Query: 156 PVSAFNEPLSTSG--SLDSDKPFPRQSPGMPVGNFKSTFT-----YEELKIATDNFSEAN 208
P S N G +L D FP + NF S + +L++ +++
Sbjct: 21 PKSEVNSDCLLDGLDALVYDLDFPALRKNKNIDNFLSRYKDTINKIRDLRMKAEDYEVVK 80
Query: 209 LLGQGGFGYV----HKGVLTNGKVVAIKQLKAGSGQGERE---FQAEIEIISQVHHRHLV 261
++G+G FG V HK + KV A+K L + F E +I++ + +V
Sbjct: 81 VIGRGAFGEVQLVRHK---STRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVV 137
Query: 262 SLVGYCTFGSQRLL--VYEFVPNKTLEFHLHGKDRP---VMNWPTRMKIALGSARGLAYL 316
L + F R L V E++P L + D P + + +AL + + +
Sbjct: 138 QL--FYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGF- 194
Query: 317 HEDCQPKIIHRDIKSANILLDDSFEAKVADFG 348
IHRD+K N+LLD S K+ADFG
Sbjct: 195 --------IHRDVKPDNMLLDKSGHLKLADFG 218
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 73/153 (47%), Gaps = 10/153 (6%)
Query: 204 FSEANLLGQGGFGYVHKGVLTNGKV-VAIKQLKAGSGQ--GEREFQAEIEIISQVHHRHL 260
+++ +G+G +G V K VAIK++ Q +R + EI+I+ + H ++
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLR-EIQILLRFRHENV 103
Query: 261 VSLVGYCTFGSQRLLVYEFVPNKTLEFHLHG--KDRPVMNWPTRMKIALGSARGLAYLHE 318
+ + + + ++ +E L+ K + + N RGL Y+H
Sbjct: 104 IGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSN-DHICYFLYQILRGLKYIH- 161
Query: 319 DCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
++HRD+K +N+L++ + + K+ DFGLA+
Sbjct: 162 --SANVLHRDLKPSNLLINTTCDLKICDFGLAR 192
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 74/153 (48%), Gaps = 10/153 (6%)
Query: 204 FSEANLLGQGGFGYVHKGVLTNGKV-VAIKQLKAGSGQG--EREFQAEIEIISQVHHRHL 260
++ + +G+G +G V KV VAIK++ Q +R + EI+I+ + H ++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLR-EIKILLRFRHENI 87
Query: 261 VSLVGYCTFGSQRLLVYEFVPNKTLEFHLHG--KDRPVMNWPTRMKIALGSARGLAYLHE 318
+ + + + ++ +E L+ K + + N RGL Y+H
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN-DHICYFLYQILRGLKYIH- 145
Query: 319 DCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
++HRD+K +N+LL+ + + K+ DFGLA+
Sbjct: 146 --SANVLHRDLKPSNLLLNTTXDLKICDFGLAR 176
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 74/153 (48%), Gaps = 10/153 (6%)
Query: 204 FSEANLLGQGGFGYVHKGVLTNGKV-VAIKQLKAGSGQ--GEREFQAEIEIISQVHHRHL 260
++ + +G+G +G V KV VAIK++ Q +R + EI+I+ + H ++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 87
Query: 261 VSLVGYCTFGSQRLLVYEFVPNKTLEFHLHG--KDRPVMNWPTRMKIALGSARGLAYLHE 318
+ + + + ++ +E L+ K + + N RGL Y+H
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSN-DHICYFLYQILRGLKYIH- 145
Query: 319 DCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
++HRD+K +N+LL+ + + K+ DFGLA+
Sbjct: 146 --SANVLHRDLKPSNLLLNTTCDLKICDFGLAR 176
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 70/161 (43%), Gaps = 10/161 (6%)
Query: 199 IATDNFSEANLLGQGGFGYVHKGVLT-NGKVVAIKQLKAGSGQGEREF---QAEIEIISQ 254
+ +F ++G+G + V L ++ A+K +K + + Q E + Q
Sbjct: 2 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 61
Query: 255 V-HHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGL 313
+H LV L S+ V E+V L FH+ + R + R A S L
Sbjct: 62 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQ-RQRKLPEEHARFYSAEISL-AL 119
Query: 314 AYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSL 354
YLHE II+RD+K N+LLD K+ D+G+ K L
Sbjct: 120 NYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 157
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 93/218 (42%), Gaps = 42/218 (19%)
Query: 172 SDKPFPRQSPGMPVGNFKSTFT--YEELKIATDNFSEANLLGQGGFGYVHKGVLTNG-KV 228
++ P R+ + + FT +++++ ++F ++G+G FG V L N KV
Sbjct: 42 NNSPLRREKNILEYLEWAKPFTSKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKV 101
Query: 229 VAIKQLKAGSGQGERE---FQAEIEI--------ISQVHH-----RHLVSLVGYCTFGSQ 272
A+K L E F+ E ++ I+ +H+ +L ++ Y G
Sbjct: 102 FAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDL 161
Query: 273 RLLVYEF---VPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRDI 329
L+ +F +P + F+L M IA+ S L Y +HRDI
Sbjct: 162 LTLLSKFEDRLPEEMARFYL-----------AEMVIAIDSVHQLHY---------VHRDI 201
Query: 330 KSANILLDDSFEAKVADFGLAKHSLDTDTHVSTRVMGT 367
K NIL+D + ++ADFG ++ T S+ +GT
Sbjct: 202 KPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGT 239
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 73/153 (47%), Gaps = 10/153 (6%)
Query: 204 FSEANLLGQGGFGYVHKGVLTNGKV-VAIKQLKAGSGQ--GEREFQAEIEIISQVHHRHL 260
++ + +G+G +G V KV VAIK++ Q +R + EI+I+ H ++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLAFRHENI 85
Query: 261 VSLVGYCTFGSQRLLVYEFVPNKTLEFHLHG--KDRPVMNWPTRMKIALGSARGLAYLHE 318
+ + + + ++ +E L+ K + + N RGL Y+H
Sbjct: 86 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN-DHICYFLYQILRGLKYIH- 143
Query: 319 DCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
++HRD+K +N+LL+ + + K+ DFGLA+
Sbjct: 144 --SANVLHRDLKPSNLLLNTTCDLKICDFGLAR 174
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 63/133 (47%), Gaps = 16/133 (12%)
Query: 169 SLDSDKPFPRQSPGMPVGNFKSTFTYEELKIATDNFSEANLLGQGGFGYVHK----GVLT 224
S+ + P Q +P K F E LK+ LG+G FG V + G+
Sbjct: 1 SMPDEVPLDEQCERLPYDASKWEFARERLKLGKS-------LGRGAFGKVVQASAFGIKK 53
Query: 225 N--GKVVAIKQLKAGSGQGE-REFQAEIEIISQV-HHRHLVSLVGYCTF-GSQRLLVYEF 279
+ + VA+K LK G+ E + E++I++ + HH ++V+L+G CT G +++ E+
Sbjct: 54 SPTCRTVAVKMLKEGATASEYKALMTELKILTHIGHHLNVVNLLGACTKQGGPLMVIVEY 113
Query: 280 VPNKTLEFHLHGK 292
L +L K
Sbjct: 114 CKYGNLSNYLKSK 126
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Query: 310 ARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
ARG+ +L K IHRD+ + NILL ++ K+ DFGLA+
Sbjct: 209 ARGMEFLS---SRKCIHRDLAARNILLSENNVVKICDFGLAR 247
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 70/161 (43%), Gaps = 10/161 (6%)
Query: 199 IATDNFSEANLLGQGGFGYVHKGVLT-NGKVVAIKQLKAGSGQGEREF---QAEIEIISQ 254
+ +F ++G+G + V L ++ A+K +K + + Q E + Q
Sbjct: 17 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 76
Query: 255 V-HHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGL 313
+H LV L S+ V E+V L FH+ + R + R A S L
Sbjct: 77 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQ-RQRKLPEEHARFYSAEISL-AL 134
Query: 314 AYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSL 354
YLHE II+RD+K N+LLD K+ D+G+ K L
Sbjct: 135 NYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 172
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 74/153 (48%), Gaps = 10/153 (6%)
Query: 204 FSEANLLGQGGFGYVHKGVLTNGKV-VAIKQLKAGSGQ--GEREFQAEIEIISQVHHRHL 260
++ + +G+G +G V KV VAIK++ Q +R + EI+I+ + H ++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENI 83
Query: 261 VSLVGYCTFGSQRLLVYEFVPNKTLEFHLHG--KDRPVMNWPTRMKIALGSARGLAYLHE 318
+ + + + ++ +E L+ K + + N RGL Y+H
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN-DHICYFLYQILRGLKYIH- 141
Query: 319 DCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
++HRD+K +N+LL+ + + K+ DFGLA+
Sbjct: 142 --SANVLHRDLKPSNLLLNTTXDLKIXDFGLAR 172
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 99/257 (38%), Gaps = 82/257 (31%)
Query: 168 GSLDSDK-PFPRQSPGMPVGNFKSTFTYEELKIATDNFSEANLLGQGGFGYVHK----GV 222
G++D D+ P +P K F + LK+ LG+G FG V + G+
Sbjct: 1 GAMDPDELPLDEHCERLPYDASKWEFPRDRLKLGKP-------LGRGAFGQVIEADAFGI 53
Query: 223 --LTNGKVVAIKQLKAGSGQGE-REFQAEIEIISQV-HHRHLVSLVG------------- 265
+ VA+K LK G+ E R +E++I+ + HH ++V+L+G
Sbjct: 54 DKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 113
Query: 266 -YCTFGSQRLLVY----EFVP--NKTLEFHLHGKDRPVMNWPTRMKIALG---------- 308
+C FG+ + EFVP K F GKD V P +K L
Sbjct: 114 EFCKFGNLSTYLRSKRNEFVPYKTKGARFR-QGKDY-VGAIPVDLKRRLDSITSSQSSAS 171
Query: 309 ----SARGLAYLHEDCQP------------------------------KIIHRDIKSANI 334
+ L+ + E+ P K IHRD+ + NI
Sbjct: 172 SGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNI 231
Query: 335 LLDDSFEAKVADFGLAK 351
LL + K+ DFGLA+
Sbjct: 232 LLSEKNVVKICDFGLAR 248
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 87/194 (44%), Gaps = 48/194 (24%)
Query: 180 SPGMPVGNFKSTFTYEELKIATDNFSEANLLGQGGFGYV--HKGVLTNG----KVVAIKQ 233
+PGM V + + F+ D + +LG+G FG V K +T KV++ +Q
Sbjct: 12 TPGMFVQHSTAIFS--------DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQ 63
Query: 234 LKAGSGQGEREFQAEIEIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGK- 292
+K + + E++++ Q+ H +++ L YEF +K F+L G+
Sbjct: 64 VKQKTDK--ESLLREVQLLKQLDHPNIMKL-------------YEFFEDKGY-FYLVGEV 107
Query: 293 -----------DRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFE 341
R + +I G+ Y+H++ KI+HRD+K N+LL+ +
Sbjct: 108 YTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSK 164
Query: 342 ---AKVADFGLAKH 352
++ DFGL+ H
Sbjct: 165 DANIRIIDFGLSTH 178
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 73/161 (45%), Gaps = 33/161 (20%)
Query: 210 LGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQAEI---------EIISQVHHRH 259
+G G +G V + +G+ VAIK+L R FQ+EI ++ + H +
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKL-------SRPFQSEIFAKRAYRELLLLKHMQHEN 84
Query: 260 LVSLVGYCTFGSQRLLVYEF---VPNKTLEFH----LHGKDRPVMNWPTRMKIALGSARG 312
++ L+ T S Y+F +P + L + + +M +G
Sbjct: 85 VIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQM------LKG 138
Query: 313 LAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHS 353
L Y+H ++HRD+K N+ +++ E K+ DFGLA+H+
Sbjct: 139 LKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLARHA 176
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 75/170 (44%), Gaps = 30/170 (17%)
Query: 197 LKIATDNFSEANLLGQGGFGYVHKGVLTN-GKVVAIKQL---KAGSGQGEREFQAEIEII 252
+ + ++FS ++G+GGFG V+ + GK+ A+K L + QGE
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGE---------T 234
Query: 253 SQVHHRHLVSLV--GYCTFGSQRLLVYEFVPNKTLEF----------HLHGKDRPVMNWP 300
++ R ++SLV G C F + Y F L F H H V +
Sbjct: 235 LALNERIMLSLVSTGDCPFIV--CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEA 292
Query: 301 TRMKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
A GL ++H +++RD+K ANILLD+ +++D GLA
Sbjct: 293 DMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA 339
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 87/194 (44%), Gaps = 48/194 (24%)
Query: 180 SPGMPVGNFKSTFTYEELKIATDNFSEANLLGQGGFGYV--HKGVLTNG----KVVAIKQ 233
+PGM V + + F+ D + +LG+G FG V K +T KV++ +Q
Sbjct: 36 TPGMFVQHSTAIFS--------DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQ 87
Query: 234 LKAGSGQGEREFQAEIEIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGK- 292
+K + + E++++ Q+ H +++ L YEF +K F+L G+
Sbjct: 88 VKQKTDK--ESLLREVQLLKQLDHPNIMKL-------------YEFFEDKGY-FYLVGEV 131
Query: 293 -----------DRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFE 341
R + +I G+ Y+H++ KI+HRD+K N+LL+ +
Sbjct: 132 YTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSK 188
Query: 342 ---AKVADFGLAKH 352
++ DFGL+ H
Sbjct: 189 DANIRIIDFGLSTH 202
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 87/194 (44%), Gaps = 48/194 (24%)
Query: 180 SPGMPVGNFKSTFTYEELKIATDNFSEANLLGQGGFGYV--HKGVLTNG----KVVAIKQ 233
+PGM V + + F+ D + +LG+G FG V K +T KV++ +Q
Sbjct: 35 TPGMFVQHSTAIFS--------DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQ 86
Query: 234 LKAGSGQGEREFQAEIEIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGK- 292
+K + + E++++ Q+ H +++ L YEF +K F+L G+
Sbjct: 87 VKQKTDK--ESLLREVQLLKQLDHPNIMKL-------------YEFFEDKGY-FYLVGEV 130
Query: 293 -----------DRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFE 341
R + +I G+ Y+H++ KI+HRD+K N+LL+ +
Sbjct: 131 YTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSK 187
Query: 342 ---AKVADFGLAKH 352
++ DFGL+ H
Sbjct: 188 DANIRIIDFGLSTH 201
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 76/166 (45%), Gaps = 22/166 (13%)
Query: 210 LGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQAEI---------EIISQVHHRH 259
+G G +G V + +G+ VAIK+L R FQ+EI ++ + H +
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKL-------SRPFQSEIFAKRAYRELLLLKHMQHEN 102
Query: 260 LVSLVGYCTFGSQRLLVYEF-VPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHE 318
++ L+ T S Y+F + ++ L + + +GL Y+H
Sbjct: 103 VIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHS 162
Query: 319 DCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHS-LDTDTHVSTR 363
++HRD+K N+ +++ E K+ DFGLA+H+ + +V TR
Sbjct: 163 ---AGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR 205
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 74/153 (48%), Gaps = 10/153 (6%)
Query: 204 FSEANLLGQGGFGYVHKGVLTNGKV-VAIKQLKAGSGQ--GEREFQAEIEIISQVHHRHL 260
++ + +G+G +G V KV VAI+++ Q +R + EI+I+ + H ++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLR-EIKILLRFRHENI 87
Query: 261 VSLVGYCTFGSQRLLVYEFVPNKTLEFHLHG--KDRPVMNWPTRMKIALGSARGLAYLHE 318
+ + + + ++ +E L+ K + + N RGL Y+H
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN-DHICYFLYQILRGLKYIH- 145
Query: 319 DCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
++HRD+K +N+LL+ + + K+ DFGLA+
Sbjct: 146 --SANVLHRDLKPSNLLLNTTCDLKICDFGLAR 176
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 75/170 (44%), Gaps = 30/170 (17%)
Query: 197 LKIATDNFSEANLLGQGGFGYVHKGVLTN-GKVVAIKQL---KAGSGQGEREFQAEIEII 252
+ + ++FS ++G+GGFG V+ + GK+ A+K L + QGE
Sbjct: 183 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGE---------T 233
Query: 253 SQVHHRHLVSLV--GYCTFGSQRLLVYEFVPNKTLEF----------HLHGKDRPVMNWP 300
++ R ++SLV G C F + Y F L F H H V +
Sbjct: 234 LALNERIMLSLVSTGDCPFIV--CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEA 291
Query: 301 TRMKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
A GL ++H +++RD+K ANILLD+ +++D GLA
Sbjct: 292 DMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA 338
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 73/155 (47%), Gaps = 8/155 (5%)
Query: 202 DNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQ-LKAGSGQGE-REFQAEIEIISQVHHR 258
D + +L+G G +G+V + +VVAIK+ L+ + + EI I+++++H
Sbjct: 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHD 112
Query: 259 HLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDR-PVMNWPTRMKIALGSAR-GLAYL 316
H+V ++ +V + + R PV +K L + G+ Y+
Sbjct: 113 HVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYV 172
Query: 317 HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
H I+HRD+K AN L++ KV DFGLA+
Sbjct: 173 H---SAGILHRDLKPANCLVNQDCSVKVCDFGLAR 204
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 75/170 (44%), Gaps = 30/170 (17%)
Query: 197 LKIATDNFSEANLLGQGGFGYVHKGVLTN-GKVVAIKQL---KAGSGQGEREFQAEIEII 252
+ + ++FS ++G+GGFG V+ + GK+ A+K L + QGE
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGE---------T 234
Query: 253 SQVHHRHLVSLV--GYCTFGSQRLLVYEFVPNKTLEF----------HLHGKDRPVMNWP 300
++ R ++SLV G C F + Y F L F H H V +
Sbjct: 235 LALNERIMLSLVSTGDCPFIV--CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEA 292
Query: 301 TRMKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
A GL ++H +++RD+K ANILLD+ +++D GLA
Sbjct: 293 DMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLA 339
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 75/170 (44%), Gaps = 30/170 (17%)
Query: 197 LKIATDNFSEANLLGQGGFGYVHKGVLTN-GKVVAIKQL---KAGSGQGEREFQAEIEII 252
+ + ++FS ++G+GGFG V+ + GK+ A+K L + QGE
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGE---------T 234
Query: 253 SQVHHRHLVSLV--GYCTFGSQRLLVYEFVPNKTLEF----------HLHGKDRPVMNWP 300
++ R ++SLV G C F + Y F L F H H V +
Sbjct: 235 LALNERIMLSLVSTGDCPFIV--CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEA 292
Query: 301 TRMKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
A GL ++H +++RD+K ANILLD+ +++D GLA
Sbjct: 293 DMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLA 339
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 73/153 (47%), Gaps = 10/153 (6%)
Query: 204 FSEANLLGQGGFGYVHKGVLTNGKV-VAIKQLKAGSGQ--GEREFQAEIEIISQVHHRHL 260
++ + +G+G +G V KV VAIK++ Q +R + EI+I+ H ++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLAFRHENI 85
Query: 261 VSLVGYCTFGSQRLLVYEFVPNKTLEFHLHG--KDRPVMNWPTRMKIALGSARGLAYLHE 318
+ + + + ++ +E L+ K + + N RGL Y+H
Sbjct: 86 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN-DHICYFLYQILRGLKYIH- 143
Query: 319 DCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
++HRD+K +N+LL+ + + K+ DFGLA+
Sbjct: 144 --SANVLHRDLKPSNLLLNTTSDLKICDFGLAR 174
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 63/162 (38%), Gaps = 25/162 (15%)
Query: 202 DNFSEANLLGQGGFGYVH------------KGVLTNGKVVAIKQLKAGSGQGEREFQAEI 249
D F +G G FG V +L KVV +KQ++ E
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 250 EIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGS 309
I+ V+ LV L S +V E+VP + HL R + P A
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQI 150
Query: 310 ARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
YLH +I+RD+K N+L+D KVADFG AK
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK 189
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 70/161 (43%), Gaps = 10/161 (6%)
Query: 199 IATDNFSEANLLGQGGFGYVHKGVLT-NGKVVAIKQLKAGSGQGEREF---QAEIEIISQ 254
+ +F ++G+G + V L ++ A++ +K + + Q E + Q
Sbjct: 49 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQ 108
Query: 255 V-HHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGL 313
+H LV L S+ V E+V L FH+ + R + R A S L
Sbjct: 109 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQ-RQRKLPEEHARFYSAEISL-AL 166
Query: 314 AYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSL 354
YLHE II+RD+K N+LLD K+ D+G+ K L
Sbjct: 167 NYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 204
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 75/158 (47%), Gaps = 16/158 (10%)
Query: 202 DNFSEANLLGQGGFGYVHKGVLTNGK----VVAIKQLKAGSGQG-EREFQAEIEIISQVH 256
D + ++LG G F V +L K +VAIK + + +G E + EI ++ ++
Sbjct: 18 DIYDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIK 74
Query: 257 HRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYL 316
H ++V+L G L+ + V L + K +R+ + A + YL
Sbjct: 75 HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDA--VKYL 132
Query: 317 HEDCQPKIIHRDIKSANIL---LDDSFEAKVADFGLAK 351
H+ I+HRD+K N+L LD+ + ++DFGL+K
Sbjct: 133 HD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK 167
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 66/154 (42%), Gaps = 11/154 (7%)
Query: 201 TDNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGERE-FQAEIEIISQVHHR 258
+++ LG+G G V V + VA+K + E + EI I ++H
Sbjct: 5 VEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 259 HLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPT--RMKIALGSARGLAYL 316
++V G+ G+ + L E+ L + P + P + G+ YL
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGG----ELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 317 HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
H I HRDIK N+LLD+ K++DFGLA
Sbjct: 121 H---GIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 10/167 (5%)
Query: 210 LGQGGFGYVHK-GVLTNGKVVAIKQLKAGS-GQGERE-FQAEIEIISQVHHRHLVSLVGY 266
+G G +G K ++GK++ K+L GS + E++ +E+ ++ ++ H ++V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 267 CTFGSQRLL--VYEFVPNKTLEFHLHG--KDRPVMNWPTRMKIALGSARGLAYLHE--DC 320
+ L V E+ L + K+R ++ +++ L H D
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 321 QPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTHVSTRVMGT 367
++HRD+K AN+ LD K+ DFGLA+ L+ DT + +GT
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLAR-ILNHDTSFAKTFVGT 179
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 64/162 (39%), Gaps = 25/162 (15%)
Query: 202 DNFSEANLLGQGGFGYV----HK--------GVLTNGKVVAIKQLKAGSGQGEREFQAEI 249
D F LG G FG V HK +L KVV +KQ++ E
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN--------EK 85
Query: 250 EIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGS 309
I+ V+ LV L S +V E+VP + HL R + P A
Sbjct: 86 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQI 143
Query: 310 ARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
YLH +I+RD+K N+L+D +V DFG AK
Sbjct: 144 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 182
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 80/186 (43%), Gaps = 18/186 (9%)
Query: 177 PRQSPGMPVGNFKSTFTYEELKIATDNFSEANLLGQGGFGYV----HKGVLTNGKVVAIK 232
P + + F + + +K+ NF +LG+G FG V KG ++ A+K
Sbjct: 318 PEEKTANTISKFDNNGNRDRMKLTDFNF--LMVLGKGSFGKVMLSERKGT---DELYAVK 372
Query: 233 QLKAGSGQGEREFQA---EIEIISQVHHRHLVSLVGYCTFGSQRL-LVYEFVPNKTLEFH 288
LK + + + E +++ ++ + C RL V E+V L +H
Sbjct: 373 ILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYH 432
Query: 289 LHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFG 348
+ R P + A A GL +L II+RD+K N++LD K+ADFG
Sbjct: 433 IQQVGR--FKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFG 487
Query: 349 LAKHSL 354
+ K ++
Sbjct: 488 MCKENI 493
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 7/142 (4%)
Query: 210 LGQGGFGYVHKGVLT-NGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLVGYCT 268
+G+G G V +G+ VA+K + Q E+ I+ H ++V +
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112
Query: 269 FGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRD 328
G + ++ EF+ L + + R +N + + LAYLH +IHRD
Sbjct: 113 VGEELWVLMEFLQGGALT-DIVSQVR--LNEEQIATVCEAVLQALAYLHAQ---GVIHRD 166
Query: 329 IKSANILLDDSFEAKVADFGLA 350
IKS +ILL K++DFG
Sbjct: 167 IKSDSILLTLDGRVKLSDFGFC 188
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 64/162 (39%), Gaps = 25/162 (15%)
Query: 202 DNFSEANLLGQGGFGYV----HK--------GVLTNGKVVAIKQLKAGSGQGEREFQAEI 249
D F LG G FG V HK +L KVV +KQ++ E
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 250 EIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGS 309
I+ V+ LV L S +V E+VP + HL R + P A
Sbjct: 93 RILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQI 150
Query: 310 ARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
YLH +I+RD+K N+L+D +V DFG AK
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 10/167 (5%)
Query: 210 LGQGGFGYVHK-GVLTNGKVVAIKQLKAGS-GQGERE-FQAEIEIISQVHHRHLVSLVGY 266
+G G +G K ++GK++ K+L GS + E++ +E+ ++ ++ H ++V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 267 CTFGSQRLL--VYEFVPNKTLEFHLHG--KDRPVMNWPTRMKIALGSARGLAYLHE--DC 320
+ L V E+ L + K+R ++ +++ L H D
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 321 QPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTHVSTRVMGT 367
++HRD+K AN+ LD K+ DFGLA+ L+ DT + +GT
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLAR-ILNHDTSFAKAFVGT 179
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 64/162 (39%), Gaps = 25/162 (15%)
Query: 202 DNFSEANLLGQGGFGYV----HK--------GVLTNGKVVAIKQLKAGSGQGEREFQAEI 249
D F LG G FG V HK +L KVV +KQ++ E
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 250 EIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGS 309
I+ V+ LV L S +V E+VP + HL R + P A
Sbjct: 93 RILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQI 150
Query: 310 ARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
YLH +I+RD+K N+L+D +V DFG AK
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 36/54 (66%), Gaps = 4/54 (7%)
Query: 311 RGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDT-HVSTR 363
RGL Y+H IIHRD+K +N+ +++ E ++ DFGLA+ + + T +V+TR
Sbjct: 134 RGLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATR 184
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 64/162 (39%), Gaps = 25/162 (15%)
Query: 202 DNFSEANLLGQGGFGYV----HK--------GVLTNGKVVAIKQLKAGSGQGEREFQAEI 249
D F LG G FG V HK +L KVV +KQ++ E
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 250 EIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGS 309
I+ V+ LV L S +V E+VP + HL R + P A
Sbjct: 93 RILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQI 150
Query: 310 ARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
YLH +I+RD+K N+L+D +V DFG AK
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 72/147 (48%), Gaps = 12/147 (8%)
Query: 210 LGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQA--EIEIISQVHHRHLVSLVGY 266
+G+G +G V K ++VA+K+++ A EI ++ ++ H+++V L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 267 CTFGSQRLLVYEFVPNKTLEFH--LHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQPKI 324
+ LV+EF ++ +G P + ++ +GL + H +
Sbjct: 70 LHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLL----KGLGFCH---SRNV 122
Query: 325 IHRDIKSANILLDDSFEAKVADFGLAK 351
+HRD+K N+L++ + E K+A+FGLA+
Sbjct: 123 LHRDLKPQNLLINRNGELKLANFGLAR 149
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 64/162 (39%), Gaps = 25/162 (15%)
Query: 202 DNFSEANLLGQGGFGYV----HK--------GVLTNGKVVAIKQLKAGSGQGEREFQAEI 249
D F LG G FG V HK +L KVV +KQ++ E
Sbjct: 62 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN--------EK 113
Query: 250 EIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGS 309
I+ V+ LV L S +V E+VP + HL R + P A
Sbjct: 114 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQI 171
Query: 310 ARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
YLH +I+RD+K N+L+D +V DFG AK
Sbjct: 172 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 210
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 64/162 (39%), Gaps = 25/162 (15%)
Query: 202 DNFSEANLLGQGGFGYV----HK--------GVLTNGKVVAIKQLKAGSGQGEREFQAEI 249
D F LG G FG V HK +L KVV +KQ++ E
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN--------EK 93
Query: 250 EIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGS 309
I+ V+ LV L S +V E+VP + HL R + P A
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQI 151
Query: 310 ARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
YLH +I+RD+K N+L+D +V DFG AK
Sbjct: 152 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 64/162 (39%), Gaps = 25/162 (15%)
Query: 202 DNFSEANLLGQGGFGYV----HK--------GVLTNGKVVAIKQLKAGSGQGEREFQAEI 249
D F LG G FG V HK +L KVV +KQ++ E
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN--------EK 93
Query: 250 EIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGS 309
I+ V+ LV L S +V E+VP + HL R + P A
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQI 151
Query: 310 ARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
YLH +I+RD+K N+L+D +V DFG AK
Sbjct: 152 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 89/219 (40%), Gaps = 32/219 (14%)
Query: 164 LSTSGSLDSDKPFPRQSPGMPVGNFKSTFT-----YEELKIATDNFSEANLLGQGGFGYV 218
L SL D FP + NF + + L++ +++ ++G+G FG V
Sbjct: 32 LDGLNSLVLDLDFPALRKNKNIDNFLNRYEKIVKKIRGLQMKAEDYDVVKVIGRGAFGEV 91
Query: 219 ----HKGVLTNGKVVAIKQLKAGSGQGERE---FQAEIEIISQVHHRHLVSLVGYCTFGS 271
HK + KV A+K L + F E +I++ + +V L +C F
Sbjct: 92 QLVRHKA---SQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQL--FCAFQD 146
Query: 272 QRLL--VYEFVPNKTLEFHLHGKDRP---VMNWPTRMKIALGSARGLAYLHEDCQPKIIH 326
+ L V E++P L + D P + + +AL + + +IH
Sbjct: 147 DKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMG---------LIH 197
Query: 327 RDIKSANILLDDSFEAKVADFGLAKHSLDTD-THVSTRV 364
RD+K N+LLD K+ADFG +T H T V
Sbjct: 198 RDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAV 236
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 64/162 (39%), Gaps = 25/162 (15%)
Query: 202 DNFSEANLLGQGGFGYV----HK--------GVLTNGKVVAIKQLKAGSGQGEREFQAEI 249
D F LG G FG V HK +L KVV +KQ++ E
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN--------EK 93
Query: 250 EIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGS 309
I+ V+ LV L S +V E+VP + HL R + P A
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQI 151
Query: 310 ARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
YLH +I+RD+K N+L+D +V DFG AK
Sbjct: 152 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 75/158 (47%), Gaps = 16/158 (10%)
Query: 202 DNFSEANLLGQGGFGYVHKGVLTNGK----VVAIKQLKAGSGQG-EREFQAEIEIISQVH 256
D + ++LG G F V +L K +VAIK + + +G E + EI ++ ++
Sbjct: 18 DIYDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIK 74
Query: 257 HRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYL 316
H ++V+L G L+ + V L + K +R+ + A + YL
Sbjct: 75 HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDA--VKYL 132
Query: 317 HEDCQPKIIHRDIKSANIL---LDDSFEAKVADFGLAK 351
H+ I+HRD+K N+L LD+ + ++DFGL+K
Sbjct: 133 HD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK 167
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 63/162 (38%), Gaps = 25/162 (15%)
Query: 202 DNFSEANLLGQGGFGYV----HK--------GVLTNGKVVAIKQLKAGSGQGEREFQAEI 249
D F LG G FG V HK +L KVV +KQ++ E
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN--------EK 85
Query: 250 EIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGS 309
I+ V+ LV L S +V E+VP + HL R P A
Sbjct: 86 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FXEPHARFYAAQI 143
Query: 310 ARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
YLH +I+RD+K N+L+D +V DFG AK
Sbjct: 144 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 182
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 70/164 (42%), Gaps = 19/164 (11%)
Query: 201 TDNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQ--------AEIEI 251
+ +S + LG G FG+V V K V +K +K + + EI I
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAI 82
Query: 252 ISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNK---TLEFHLHGKDRPVMNWPTRMKIALG 308
+S+V H +++ ++ F +Q ++ V K L+ P ++ P I
Sbjct: 83 LSRVEHANIIKVLD--IFENQGF--FQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQ 138
Query: 309 SARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKH 352
+ YL IIHRDIK NI++ + F K+ DFG A +
Sbjct: 139 LVSAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDFGSAAY 179
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 75/158 (47%), Gaps = 16/158 (10%)
Query: 202 DNFSEANLLGQGGFGYVHKGVLTNGK----VVAIKQLKAGSGQG-EREFQAEIEIISQVH 256
D + ++LG G F V +L K +VAIK + + +G E + EI ++ ++
Sbjct: 18 DIYDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIK 74
Query: 257 HRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYL 316
H ++V+L G L+ + V L + K +R+ + A + YL
Sbjct: 75 HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDA--VKYL 132
Query: 317 HEDCQPKIIHRDIKSANIL---LDDSFEAKVADFGLAK 351
H+ I+HRD+K N+L LD+ + ++DFGL+K
Sbjct: 133 HD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK 167
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 75/158 (47%), Gaps = 16/158 (10%)
Query: 202 DNFSEANLLGQGGFGYVHKGVLTNGK----VVAIKQLKAGSGQG-EREFQAEIEIISQVH 256
D + ++LG G F V +L K +VAIK + + +G E + EI ++ ++
Sbjct: 18 DIYDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIK 74
Query: 257 HRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYL 316
H ++V+L G L+ + V L + K +R+ + A + YL
Sbjct: 75 HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDA--VKYL 132
Query: 317 HEDCQPKIIHRDIKSANIL---LDDSFEAKVADFGLAK 351
H+ I+HRD+K N+L LD+ + ++DFGL+K
Sbjct: 133 HD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK 167
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 36/54 (66%), Gaps = 4/54 (7%)
Query: 311 RGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDT-HVSTR 363
RGL Y+H IIHRD+K +N+ +++ E ++ DFGLA+ + + T +V+TR
Sbjct: 142 RGLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR 192
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 36/54 (66%), Gaps = 4/54 (7%)
Query: 311 RGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDT-HVSTR 363
RGL Y+H IIHRD+K +N+ +++ E ++ DFGLA+ + + T +V+TR
Sbjct: 142 RGLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR 192
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 71/167 (42%), Gaps = 27/167 (16%)
Query: 194 YEELKIATDNFSEANLLGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIIS 253
YE+ IA D LG+G FG VH+ V T+ K + + G + + EI I++
Sbjct: 4 YEKYMIAED-------LGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILN 56
Query: 254 QVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGL 313
HR+++ L + ++++EF+ G D + L +
Sbjct: 57 IARHRNILHLHESFESMEELVMIFEFIS---------GLD--IFERINTSAFELNEREIV 105
Query: 314 AYLHEDCQP-------KIIHRDIKSANILLDD--SFEAKVADFGLAK 351
+Y+H+ C+ I H DI+ NI+ S K+ +FG A+
Sbjct: 106 SYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQAR 152
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 63/162 (38%), Gaps = 25/162 (15%)
Query: 202 DNFSEANLLGQGGFGYVH------------KGVLTNGKVVAIKQLKAGSGQGEREFQAEI 249
D F +G G FG V +L KVV +KQ++ E
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 250 EIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGS 309
I+ V+ LV L S +V E++P + HL R + P A
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGR--FSEPHARFYAAQI 150
Query: 310 ARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
YLH +I+RD+K N+L+D KVADFG AK
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK 189
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 63/162 (38%), Gaps = 25/162 (15%)
Query: 202 DNFSEANLLGQGGFGYV----HK--------GVLTNGKVVAIKQLKAGSGQGEREFQAEI 249
D F LG G FG V HK +L KVV +KQ++ E
Sbjct: 42 DQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN--------EK 93
Query: 250 EIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGS 309
I V+ LV L S +V E+ P + HL R + P A
Sbjct: 94 RIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGR--FSEPHARFYAAQI 151
Query: 310 ARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
YLH +I+RD+K N+L+D KVADFG AK
Sbjct: 152 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK 190
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 63/162 (38%), Gaps = 25/162 (15%)
Query: 202 DNFSEANLLGQGGFGYVH------------KGVLTNGKVVAIKQLKAGSGQGEREFQAEI 249
D F +G G FG V +L KVV +KQ++ E
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 250 EIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGS 309
I+ V+ LV L S +V E++P + HL R + P A
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGR--FSEPHARFYAAQI 150
Query: 310 ARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
YLH +I+RD+K N+L+D KVADFG AK
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK 189
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 68/151 (45%), Gaps = 11/151 (7%)
Query: 203 NFSEANLLGQGGFGYVHKGVLTNGK------VVAIKQLKAGSGQGEREFQAEIEIISQVH 256
+F + N L + H G L G+ VV + +++ S + R+F E +
Sbjct: 8 DFKQLNFLTK--LNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFS 65
Query: 257 HRHLVSLVGYCTF--GSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLA 314
H +++ ++G C L+ + P +L LH V++ +K AL ARG A
Sbjct: 66 HPNVLPVLGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGXA 125
Query: 315 YLHEDCQPKIIHRDIKSANILLDDSFEAKVA 345
+LH +P I + S ++ +D+ A+++
Sbjct: 126 FLHT-LEPLIPRHALNSRSVXIDEDXTARIS 155
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 63/162 (38%), Gaps = 25/162 (15%)
Query: 202 DNFSEANLLGQGGFGYV----HK--------GVLTNGKVVAIKQLKAGSGQGEREFQAEI 249
D F LG G FG V HK +L KVV +KQ++ E
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN--------EK 93
Query: 250 EIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGS 309
I+ V+ LV L S +V E+ P + HL R + P A
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR--FSEPHARFYAAQI 151
Query: 310 ARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
YLH +I+RD+K N+++D KV DFG AK
Sbjct: 152 VLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK 190
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 62/162 (38%), Gaps = 25/162 (15%)
Query: 202 DNFSEANLLGQGGFGYVH------------KGVLTNGKVVAIKQLKAGSGQGEREFQAEI 249
D F LG G FG V +L KVV +KQ++ E
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--------EK 78
Query: 250 EIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGS 309
I+ V+ LV L S +V E+VP + HL R + P A
Sbjct: 79 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQI 136
Query: 310 ARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
YLH +I+RD+K N+L+D +V DFG AK
Sbjct: 137 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 175
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 77/167 (46%), Gaps = 10/167 (5%)
Query: 210 LGQGGFGYVHK-GVLTNGKVVAIKQLKAGS-GQGERE-FQAEIEIISQVHHRHLVSLVGY 266
+G G +G K ++GK++ K+L GS + E++ +E+ ++ ++ H ++V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 267 CTFGSQRLL--VYEFVPNKTLEFHLHG--KDRPVMNWPTRMKIALGSARGLAYLHE--DC 320
+ L V E+ L + K+R ++ +++ L H D
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 321 QPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTHVSTRVMGT 367
++HRD+K AN+ LD K+ DFGLA+ L+ D + +GT
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLAR-ILNHDEDFAKEFVGT 179
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 62/162 (38%), Gaps = 25/162 (15%)
Query: 202 DNFSEANLLGQGGFGYVH------------KGVLTNGKVVAIKQLKAGSGQGEREFQAEI 249
D F LG G FG V +L KVV +KQ++ E
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 250 EIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGS 309
I+ V+ LV L S +V E+VP + HL R + P A
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQI 150
Query: 310 ARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
YLH +I+RD+K N+L+D +V DFG AK
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 28/183 (15%)
Query: 185 VGNFKSTFTYEELKIATDNFSEANLLGQGGFGYV----HKGVLTNGKVVAIKQLKAGSGQ 240
V F + + +K+ NF +LG+G FG V KG ++ A+K LK
Sbjct: 5 VSKFDNNGNRDRMKLTDFNF--LMVLGKGSFGKVMLSERKG---TDELYAVKILKKDVVI 59
Query: 241 GEREFQAEIEIISQVHHRHL--------VSLVGYCTFGSQRL-LVYEFVPNKTLEFHLHG 291
+ + + + V R L ++ + C RL V E+V L +H+
Sbjct: 60 QDDDVEC-----TMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQ 114
Query: 292 KDRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
R P + A A GL +L II+RD+K N++LD K+ADFG+ K
Sbjct: 115 VGR--FKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCK 169
Query: 352 HSL 354
++
Sbjct: 170 ENI 172
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 62/162 (38%), Gaps = 25/162 (15%)
Query: 202 DNFSEANLLGQGGFGYVH------------KGVLTNGKVVAIKQLKAGSGQGEREFQAEI 249
D F LG G FG V +L KVV +KQ++ E
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 250 EIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGS 309
I+ V+ LV L S +V E+VP + HL R + P A
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQI 150
Query: 310 ARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
YLH +I+RD+K N+L+D +V DFG AK
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 62/162 (38%), Gaps = 25/162 (15%)
Query: 202 DNFSEANLLGQGGFGYVH------------KGVLTNGKVVAIKQLKAGSGQGEREFQAEI 249
D F LG G FG V +L KVV +KQ++ E
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--------EK 93
Query: 250 EIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGS 309
I+ V+ LV L S +V E+VP + HL R + P A
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQI 151
Query: 310 ARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
YLH +I+RD+K N+L+D +V DFG AK
Sbjct: 152 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 62/162 (38%), Gaps = 25/162 (15%)
Query: 202 DNFSEANLLGQGGFGYVH------------KGVLTNGKVVAIKQLKAGSGQGEREFQAEI 249
D F LG G FG V +L KVV +KQ++ E
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--------EK 93
Query: 250 EIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGS 309
I+ V+ LV L S +V E+VP + HL R + P A
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQI 151
Query: 310 ARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
YLH +I+RD+K N+L+D +V DFG AK
Sbjct: 152 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 62/162 (38%), Gaps = 25/162 (15%)
Query: 202 DNFSEANLLGQGGFGYVH------------KGVLTNGKVVAIKQLKAGSGQGEREFQAEI 249
D F LG G FG V +L KVV +KQ++ E
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 250 EIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGS 309
I+ V+ LV L S +V E+VP + HL R + P A
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQI 150
Query: 310 ARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
YLH +I+RD+K N+L+D +V DFG AK
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 97/255 (38%), Gaps = 82/255 (32%)
Query: 170 LDSDK-PFPRQSPGMPVGNFKSTFTYEELKIATDNFSEANLLGQGGFGYVHK----GV-- 222
+D D+ P +P K F + LK+ LG+G FG V + G+
Sbjct: 1 MDPDELPLDEHCERLPYDASKWEFPRDRLKLGKP-------LGRGAFGQVIEADAFGIDK 53
Query: 223 LTNGKVVAIKQLKAGSGQGE-REFQAEIEIISQV-HHRHLVSLVG--------------Y 266
+ VA+K LK G+ E R +E++I+ + HH ++V+L+G +
Sbjct: 54 TATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEF 113
Query: 267 CTFGSQRLLVY----EFVP--NKTLEFHLHGKDRPVMNWPTRMKIALG------------ 308
C FG+ + EFVP K F GKD V P +K L
Sbjct: 114 CKFGNLSTYLRSKRNEFVPYKTKGARFR-QGKDY-VGAIPVDLKRRLDSITSSQSSASSG 171
Query: 309 --SARGLAYLHEDCQP------------------------------KIIHRDIKSANILL 336
+ L+ + E+ P K IHRD+ + NILL
Sbjct: 172 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL 231
Query: 337 DDSFEAKVADFGLAK 351
+ K+ DFGLA+
Sbjct: 232 SEKNVVKICDFGLAR 246
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 63/154 (40%), Gaps = 9/154 (5%)
Query: 202 DNFSEANLLGQGGFG-YVHKGVLTNGKVVAIKQLKAGSGQGEREF---QAEIEIISQVHH 257
++F +LG+G F V L + AIK L+ E + E +++S++ H
Sbjct: 10 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 69
Query: 258 RHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLH 317
V L Y TF L + K E + + + L YLH
Sbjct: 70 PFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 127
Query: 318 EDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
IIHRD+K NILL++ ++ DFG AK
Sbjct: 128 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAK 158
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 76/155 (49%), Gaps = 23/155 (14%)
Query: 210 LGQGGFGYVHKGVLTNGKV-VAIKQLKAGS-GQGERE-FQAEIEIISQVHHRHLVSLVGY 266
+G+G F V+KG+ T V VA +L+ + ER+ F+ E E + + H ++V Y
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRF--Y 91
Query: 267 CTFGSQR------LLVYEFVPNKTLEFHLH----GKDRPVMNWPTRMKIALGSARGLAYL 316
++ S +LV E + TL+ +L K + + +W ++ +GL +L
Sbjct: 92 DSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQI------LKGLQFL 145
Query: 317 HEDCQPKIIHRDIKSANILLDD-SFEAKVADFGLA 350
H P IIHRD+K NI + + K+ D GLA
Sbjct: 146 HTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLA 179
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 74/167 (44%), Gaps = 41/167 (24%)
Query: 207 ANLLGQGGFGYVHKGVLTNGKVV--AIKQLKAGSG----QGEREFQAEIEIISQVHHRHL 260
+LLG+G +G V K VL + + A+K LK GE + EI+++ ++ H+++
Sbjct: 10 GDLLGEGSYGKV-KEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNV 68
Query: 261 VSLVG---------------YCTFGSQRLLVYEFVPNKTLEF-HLHGKDRPVMNWPTRMK 304
+ LV YC G Q +L + VP K HG +++
Sbjct: 69 IQLVDVLYNEEKQKMYMVMEYCVCGMQEML--DSVPEKRFPVCQAHGYFCQLID------ 120
Query: 305 IALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
GL YLH I+H+DIK N+LL K++ G+A+
Sbjct: 121 -------GLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAE 157
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 64/162 (39%), Gaps = 25/162 (15%)
Query: 202 DNFSEANLLGQGGFGYV----HK--------GVLTNGKVVAIKQLKAGSGQGEREFQAEI 249
D F LG G FG V HK +L KVV +KQ++ E
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--------EK 79
Query: 250 EIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGS 309
I+ V+ LV L S +V E+V + HL R + P A
Sbjct: 80 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQI 137
Query: 310 ARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
YLH +I+RD+K N+L+D+ +V DFG AK
Sbjct: 138 VLTFEYLH---SLDLIYRDLKPENLLIDEQGYIQVTDFGFAK 176
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 81/193 (41%), Gaps = 40/193 (20%)
Query: 195 EELKIATDNFSEANLLGQGGFGYVHKGVLTN----------GKVVAIKQLKAGSGQGERE 244
+E+++ ++F ++G+G FG V + N K +K+ + + ER+
Sbjct: 67 KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERD 126
Query: 245 F--QAEIEIISQVHH-----RHLVSLVGYCTFGSQRLLVYEF---VPNKTLEFHLHGKDR 294
+ + I+ +H+ HL ++ Y G L+ +F +P F++
Sbjct: 127 VLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYI----- 181
Query: 295 PVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSL 354
M +A+ S L Y +HRDIK N+LLD + ++ADFG
Sbjct: 182 ------GEMVLAIDSIHQLHY---------VHRDIKPDNVLLDVNGHIRLADFGSCLKMN 226
Query: 355 DTDTHVSTRVMGT 367
D T S+ +GT
Sbjct: 227 DDGTVQSSVAVGT 239
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 81/193 (41%), Gaps = 40/193 (20%)
Query: 195 EELKIATDNFSEANLLGQGGFGYVHKGVLTN----------GKVVAIKQLKAGSGQGERE 244
+E+++ ++F ++G+G FG V + N K +K+ + + ER+
Sbjct: 83 KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERD 142
Query: 245 F--QAEIEIISQVHH-----RHLVSLVGYCTFGSQRLLVYEF---VPNKTLEFHLHGKDR 294
+ + I+ +H+ HL ++ Y G L+ +F +P F++
Sbjct: 143 VLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYI----- 197
Query: 295 PVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSL 354
M +A+ S L Y +HRDIK N+LLD + ++ADFG
Sbjct: 198 ------GEMVLAIDSIHQLHY---------VHRDIKPDNVLLDVNGHIRLADFGSCLKMN 242
Query: 355 DTDTHVSTRVMGT 367
D T S+ +GT
Sbjct: 243 DDGTVQSSVAVGT 255
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 63/154 (40%), Gaps = 9/154 (5%)
Query: 202 DNFSEANLLGQGGFG-YVHKGVLTNGKVVAIKQLKAGSGQGEREF---QAEIEIISQVHH 257
++F +LG+G F V L + AIK L+ E + E +++S++ H
Sbjct: 9 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 68
Query: 258 RHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLH 317
V L Y TF L + K E + + + L YLH
Sbjct: 69 PFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 126
Query: 318 EDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
IIHRD+K NILL++ ++ DFG AK
Sbjct: 127 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAK 157
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 61/162 (37%), Gaps = 25/162 (15%)
Query: 202 DNFSEANLLGQGGFGYVH------------KGVLTNGKVVAIKQLKAGSGQGEREFQAEI 249
D F LG G FG V +L KVV +KQ++ E
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 250 EIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGS 309
I+ V+ LV L S +V E+VP + HL R P A
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FXEPHARFYAAQI 150
Query: 310 ARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
YLH +I+RD+K N+L+D +V DFG AK
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 78/175 (44%), Gaps = 40/175 (22%)
Query: 199 IATDNFSEANLLGQGGFGYV--HKGVLTNG----KVVAIKQLKAGSGQGEREFQAEIEII 252
I +D + +LG+G FG V K +T KV++ +Q+K + + E++++
Sbjct: 23 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDK--ESLLREVQLL 80
Query: 253 SQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGK------------DRPVMNWP 300
Q+ H ++ L YEF +K F+L G+ R +
Sbjct: 81 KQLDHPNIXKL-------------YEFFEDKGY-FYLVGEVYTGGELFDEIISRKRFSEV 126
Query: 301 TRMKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFE---AKVADFGLAKH 352
+I G+ Y H++ KI+HRD+K N+LL+ + ++ DFGL+ H
Sbjct: 127 DAARIIRQVLSGITYXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTH 178
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 61/162 (37%), Gaps = 25/162 (15%)
Query: 202 DNFSEANLLGQGGFGYVH------------KGVLTNGKVVAIKQLKAGSGQGEREFQAEI 249
D F LG G FG V +L KVV +KQ++ E
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 250 EIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGS 309
I+ V+ LV L S +V E+VP + HL R P A
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FXEPHARFYAAQI 150
Query: 310 ARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
YLH +I+RD+K N+L+D +V DFG AK
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 78/171 (45%), Gaps = 10/171 (5%)
Query: 203 NFSEANLLGQGGFGYVHKG-VLTNGKVVAIKQLKA---GSGQGEREFQAEIEIISQVHHR 258
NF +G+G F V++ L +G VA+K+++ + + EI+++ Q++H
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 259 HLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLH--GKDRPVMNWPTRMKIALGSARGLAYL 316
+++ ++ +V E L + K + ++ T K + L ++
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHM 152
Query: 317 HEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTHVSTRVMGT 367
H +++HRDIK AN+ + + K+ D GL + + T + ++GT
Sbjct: 153 HSR---RVMHRDIKPANVFITATGVVKLGDLGLGRF-FSSKTTAAHSLVGT 199
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 61/162 (37%), Gaps = 25/162 (15%)
Query: 202 DNFSEANLLGQGGFGYVH------------KGVLTNGKVVAIKQLKAGSGQGEREFQAEI 249
D F LG G FG V +L KVV +KQ++ E
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--------EK 93
Query: 250 EIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGS 309
I+ V+ LV L S +V E+VP + HL R P A
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FXEPHARFYAAQI 151
Query: 310 ARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
YLH +I+RD+K N+L+D +V DFG AK
Sbjct: 152 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 63/154 (40%), Gaps = 9/154 (5%)
Query: 202 DNFSEANLLGQGGFG-YVHKGVLTNGKVVAIKQLKAGSGQGEREF---QAEIEIISQVHH 257
++F +LG+G F V L + AIK L+ E + E +++S++ H
Sbjct: 7 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 66
Query: 258 RHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLH 317
V L Y TF L + K E + + + L YLH
Sbjct: 67 PFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 124
Query: 318 EDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
IIHRD+K NILL++ ++ DFG AK
Sbjct: 125 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAK 155
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 63/154 (40%), Gaps = 9/154 (5%)
Query: 202 DNFSEANLLGQGGFG-YVHKGVLTNGKVVAIKQLKAGSGQGEREF---QAEIEIISQVHH 257
++F +LG+G F V L + AIK L+ E + E +++S++ H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 258 RHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLH 317
V L Y TF L + K E + + + L YLH
Sbjct: 93 PFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 150
Query: 318 EDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
IIHRD+K NILL++ ++ DFG AK
Sbjct: 151 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAK 181
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 71/163 (43%), Gaps = 36/163 (22%)
Query: 210 LGQGGFGYVHKGVL-TNGKVVAIKQLKAGSGQGEREFQAEI---------EIISQVHHRH 259
+G G +G V V G VAIK+L R FQ+E+ ++ + H +
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLY-------RPFQSELFAKRAYRELRLLKHMRHEN 85
Query: 260 LVSLVGYCT------FGSQRLLVYEFVPN---KTLEFHLHGKDRPVMNWPTRMKIALGSA 310
++ L+ T + LV F+ K ++ G+DR +
Sbjct: 86 VIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQF-------LVYQML 138
Query: 311 RGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHS 353
+GL Y+H IIHRD+K N+ +++ E K+ DFGLA+ +
Sbjct: 139 KGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQA 178
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 63/154 (40%), Gaps = 9/154 (5%)
Query: 202 DNFSEANLLGQGGFG-YVHKGVLTNGKVVAIKQLKAGSGQGEREF---QAEIEIISQVHH 257
++F +LG+G F V L + AIK L+ E + E +++S++ H
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 67
Query: 258 RHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLH 317
V L Y TF L + K E + + + L YLH
Sbjct: 68 PFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 125
Query: 318 EDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
IIHRD+K NILL++ ++ DFG AK
Sbjct: 126 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAK 156
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 63/154 (40%), Gaps = 9/154 (5%)
Query: 202 DNFSEANLLGQGGFG-YVHKGVLTNGKVVAIKQLKAGSGQGEREF---QAEIEIISQVHH 257
++F +LG+G F V L + AIK L+ E + E +++S++ H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 258 RHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLH 317
V L Y TF L + K E + + + L YLH
Sbjct: 93 PFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 150
Query: 318 EDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
IIHRD+K NILL++ ++ DFG AK
Sbjct: 151 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAK 181
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 63/154 (40%), Gaps = 9/154 (5%)
Query: 202 DNFSEANLLGQGGFG-YVHKGVLTNGKVVAIKQLKAGSGQGEREF---QAEIEIISQVHH 257
++F +LG+G F V L + AIK L+ E + E +++S++ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 258 RHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLH 317
V L Y TF L + K E + + + L YLH
Sbjct: 92 PFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 149
Query: 318 EDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
IIHRD+K NILL++ ++ DFG AK
Sbjct: 150 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAK 180
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 93/249 (37%), Gaps = 81/249 (32%)
Query: 175 PFPRQSPGMPVGNFKSTFTYEELKIATDNFSEANLLGQGGFGYVHK----GV--LTNGKV 228
P +P K F + LK+ LG+G FG V + G+ +
Sbjct: 2 PLDEHCERLPYDASKWEFPRDRLKLGKP-------LGRGAFGQVIEADAFGIDKTATCRT 54
Query: 229 VAIKQLKAGSGQGE-REFQAEIEIISQV-HHRHLVSLVG--------------YCTFGSQ 272
VA+K LK G+ E R +E++I+ + HH ++V+L+G +C FG+
Sbjct: 55 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 114
Query: 273 RLLVY----EFVP--NKTLEFHLHGKDRPVMNWPTRMKIALG--------------SARG 312
+ EFVP K F GKD V P +K L +
Sbjct: 115 STYLRSKRNEFVPYKTKGARFR-QGKDY-VGAIPVDLKRRLDSITSSQSSASSGFVEEKS 172
Query: 313 LAYLHEDCQP------------------------------KIIHRDIKSANILLDDSFEA 342
L+ + E+ P K IHRD+ + NILL +
Sbjct: 173 LSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVV 232
Query: 343 KVADFGLAK 351
K+ DFGLA+
Sbjct: 233 KICDFGLAR 241
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 63/154 (40%), Gaps = 9/154 (5%)
Query: 202 DNFSEANLLGQGGFG-YVHKGVLTNGKVVAIKQLKAGSGQGEREF---QAEIEIISQVHH 257
++F +LG+G F V L + AIK L+ E + E +++S++ H
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 258 RHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLH 317
V L Y TF L + K E + + + L YLH
Sbjct: 95 PFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 152
Query: 318 EDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
IIHRD+K NILL++ ++ DFG AK
Sbjct: 153 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAK 183
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 63/162 (38%), Gaps = 25/162 (15%)
Query: 202 DNFSEANLLGQGGFGYV----HK--------GVLTNGKVVAIKQLKAGSGQGEREFQAEI 249
D F LG G FG V HK +L KVV +KQ++ E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 250 EIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGS 309
I+ V+ LV L S +V E+V + HL R + P A
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQI 150
Query: 310 ARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
YLH +I+RD+K N+L+D +V DFG AK
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 63/154 (40%), Gaps = 9/154 (5%)
Query: 202 DNFSEANLLGQGGFG-YVHKGVLTNGKVVAIKQLKAGSGQGEREF---QAEIEIISQVHH 257
++F +LG+G F V L + AIK L+ E + E +++S++ H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 258 RHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLH 317
V L Y TF L + K E + + + L YLH
Sbjct: 90 PFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 147
Query: 318 EDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
IIHRD+K NILL++ ++ DFG AK
Sbjct: 148 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAK 178
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 63/154 (40%), Gaps = 9/154 (5%)
Query: 202 DNFSEANLLGQGGFG-YVHKGVLTNGKVVAIKQLKAGSGQGEREF---QAEIEIISQVHH 257
++F +LG+G F V L + AIK L+ E + E +++S++ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 258 RHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLH 317
V L Y TF L + K E + + + L YLH
Sbjct: 92 PFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 149
Query: 318 EDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
IIHRD+K NILL++ ++ DFG AK
Sbjct: 150 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAK 180
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 73/174 (41%), Gaps = 40/174 (22%)
Query: 195 EELKIATDNFSEANLLGQGGFGYVHKGVLTN-GKVVAIK------QLKAGSGQGERE--- 244
+E+++ D+F ++G+G F V + G+V A+K LK G RE
Sbjct: 54 KEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERD 113
Query: 245 --FQAEIEIISQVH-----HRHLVSLVGYCTFGSQRLLVYEF---VPNKTLEFHLHGKDR 294
+ I+Q+H +L ++ Y G L+ +F +P + F+L
Sbjct: 114 VLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYL----- 168
Query: 295 PVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFG 348
+ +A+ S L Y +HRDIK NILLD ++ADFG
Sbjct: 169 ------AEIVMAIDSVHRLGY---------VHRDIKPDNILLDRCGHIRLADFG 207
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 63/154 (40%), Gaps = 9/154 (5%)
Query: 202 DNFSEANLLGQGGFG-YVHKGVLTNGKVVAIKQLKAGSGQGEREF---QAEIEIISQVHH 257
++F +LG+G F V L + AIK L+ E + E +++S++ H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 258 RHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLH 317
V L Y TF L + K E + + + L YLH
Sbjct: 90 PFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 147
Query: 318 EDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
IIHRD+K NILL++ ++ DFG AK
Sbjct: 148 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAK 178
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 63/154 (40%), Gaps = 9/154 (5%)
Query: 202 DNFSEANLLGQGGFG-YVHKGVLTNGKVVAIKQLKAGSGQGEREF---QAEIEIISQVHH 257
++F +LG+G F V L + AIK L+ E + E +++S++ H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 258 RHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLH 317
V L Y TF L + K E + + + L YLH
Sbjct: 90 PFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 147
Query: 318 EDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
IIHRD+K NILL++ ++ DFG AK
Sbjct: 148 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAK 178
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 63/154 (40%), Gaps = 9/154 (5%)
Query: 202 DNFSEANLLGQGGFG-YVHKGVLTNGKVVAIKQLKAGSGQGEREF---QAEIEIISQVHH 257
++F +LG+G F V L + AIK L+ E + E +++S++ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 258 RHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLH 317
V L Y TF L + K E + + + L YLH
Sbjct: 92 PFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 149
Query: 318 EDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
IIHRD+K NILL++ ++ DFG AK
Sbjct: 150 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAK 180
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 63/154 (40%), Gaps = 9/154 (5%)
Query: 202 DNFSEANLLGQGGFG-YVHKGVLTNGKVVAIKQLKAGSGQGEREF---QAEIEIISQVHH 257
++F +LG+G F V L + AIK L+ E + E +++S++ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 258 RHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLH 317
V L Y TF L + K E + + + L YLH
Sbjct: 92 PFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 149
Query: 318 EDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
IIHRD+K NILL++ ++ DFG AK
Sbjct: 150 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAK 180
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 62/162 (38%), Gaps = 25/162 (15%)
Query: 202 DNFSEANLLGQGGFGYVH------------KGVLTNGKVVAIKQLKAGSGQGEREFQAEI 249
D F LG G FG V +L KVV +K+++ E
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLN--------EK 92
Query: 250 EIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGS 309
I+ V+ LV L S +V E+ P + HL R + P A
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR--FSEPHARFYAAQI 150
Query: 310 ARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
YLH +I+RD+K N+++D KV DFGLAK
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGLAK 189
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 63/162 (38%), Gaps = 25/162 (15%)
Query: 202 DNFSEANLLGQGGFGYV----HK--------GVLTNGKVVAIKQLKAGSGQGEREFQAEI 249
D F LG G FG V HK +L KVV +KQ++ E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 250 EIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGS 309
I+ V+ LV L S +V E+V + HL R + P A
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQI 150
Query: 310 ARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
YLH +I+RD+K N+L+D +V DFG AK
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 61/162 (37%), Gaps = 25/162 (15%)
Query: 202 DNFSEANLLGQGGFGYVH------------KGVLTNGKVVAIKQLKAGSGQGEREFQAEI 249
D F LG G FG V +L KVV +KQ++ E
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 250 EIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGS 309
I+ V+ LV L S +V E+ P + HL R + P A
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR--FSEPHARFYAAQI 150
Query: 310 ARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
YLH +I+RD+K N+++D KV DFG AK
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK 189
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 63/162 (38%), Gaps = 25/162 (15%)
Query: 202 DNFSEANLLGQGGFGYV----HK--------GVLTNGKVVAIKQLKAGSGQGEREFQAEI 249
D F LG G FG V HK +L KVV +KQ++ E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 250 EIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGS 309
I+ V+ LV L S +V E+V + HL R + P A
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQI 150
Query: 310 ARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
YLH +I+RD+K N+L+D +V DFG AK
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 9/102 (8%)
Query: 210 LGQGGFGYVHK----GV--LTNGKVVAIKQLKAGSGQGE-REFQAEIEIISQV-HHRHLV 261
LG+G FG V + G+ + VA+K LK G+ E R +E++I+ + HH ++V
Sbjct: 28 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 87
Query: 262 SLVGYCTF-GSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTR 302
+L+G CT G +++ EF L +L K + + T+
Sbjct: 88 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTK 129
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 310 ARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
A+G+ +L K IHRD+ + NILL + K+ DFGLA+
Sbjct: 201 AKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 239
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 63/162 (38%), Gaps = 25/162 (15%)
Query: 202 DNFSEANLLGQGGFGYV----HK--------GVLTNGKVVAIKQLKAGSGQGEREFQAEI 249
D F LG G FG V HK +L KVV +KQ++ E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 250 EIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGS 309
I+ V+ LV L S +V E+V + HL R + P A
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQI 150
Query: 310 ARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
YLH +I+RD+K N+L+D +V DFG AK
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 63/162 (38%), Gaps = 25/162 (15%)
Query: 202 DNFSEANLLGQGGFGYV----HK--------GVLTNGKVVAIKQLKAGSGQGEREFQAEI 249
D F LG G FG V HK +L KVV +KQ++ E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 250 EIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGS 309
I+ V+ LV L S +V E+V + HL R + P A
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQI 150
Query: 310 ARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
YLH +I+RD+K N+L+D +V DFG AK
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 63/154 (40%), Gaps = 9/154 (5%)
Query: 202 DNFSEANLLGQGGFG-YVHKGVLTNGKVVAIKQLKAGSGQGEREF---QAEIEIISQVHH 257
++F +LG+G F V L + AIK L+ E + E +++S++ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 258 RHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLH 317
V L Y TF L + K E + + + L YLH
Sbjct: 92 PFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 149
Query: 318 EDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
IIHRD+K NILL++ ++ DFG AK
Sbjct: 150 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAK 180
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 63/162 (38%), Gaps = 25/162 (15%)
Query: 202 DNFSEANLLGQGGFGYV----HK--------GVLTNGKVVAIKQLKAGSGQGEREFQAEI 249
D F LG G FG V HK +L KVV +KQ++ E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 250 EIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGS 309
I+ V+ LV L S +V E+V + HL R + P A
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQI 150
Query: 310 ARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
YLH +I+RD+K N+L+D +V DFG AK
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 63/162 (38%), Gaps = 25/162 (15%)
Query: 202 DNFSEANLLGQGGFGYV----HK--------GVLTNGKVVAIKQLKAGSGQGEREFQAEI 249
D F LG G FG V HK +L KVV +KQ++ E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 250 EIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGS 309
I+ V+ LV L S +V E+V + HL R + P A
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQI 150
Query: 310 ARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
YLH +I+RD+K N+L+D +V DFG AK
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 63/162 (38%), Gaps = 25/162 (15%)
Query: 202 DNFSEANLLGQGGFGYV----HK--------GVLTNGKVVAIKQLKAGSGQGEREFQAEI 249
D F LG G FG V HK +L KVV +KQ++ E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 250 EIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGS 309
I+ V+ LV L S +V E+V + HL R + P A
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQI 150
Query: 310 ARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
YLH +I+RD+K N+L+D +V DFG AK
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 63/162 (38%), Gaps = 25/162 (15%)
Query: 202 DNFSEANLLGQGGFGYV----HK--------GVLTNGKVVAIKQLKAGSGQGEREFQAEI 249
D F LG G FG V HK +L KVV +KQ++ E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 250 EIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGS 309
I+ V+ LV L S +V E+V + HL R + P A
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQI 150
Query: 310 ARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
YLH +I+RD+K N+L+D +V DFG AK
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 72/161 (44%), Gaps = 37/161 (22%)
Query: 210 LGQGGFGYV---HKGVLTNGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSL 263
+G G G V + VL VAIK+L +R ++ E+ ++ V+H++++SL
Sbjct: 70 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 126
Query: 264 VGYCTFGSQRLLVYEFVPNKTLE-FHLHGKDRPVM--NWPTRMKIALGSAR--------- 311
+ F P KTLE F +M N +++ L R
Sbjct: 127 LNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQML 174
Query: 312 -GLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
G+ +LH IIHRD+K +NI++ K+ DFGLA+
Sbjct: 175 CGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR 212
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 63/162 (38%), Gaps = 25/162 (15%)
Query: 202 DNFSEANLLGQGGFGYV----HK--------GVLTNGKVVAIKQLKAGSGQGEREFQAEI 249
D F LG G FG V HK +L KVV +KQ++ E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 250 EIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGS 309
I+ V+ LV L S +V E+V + HL R + P A
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQI 150
Query: 310 ARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
YLH +I+RD+K N+L+D +V DFG AK
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 63/162 (38%), Gaps = 25/162 (15%)
Query: 202 DNFSEANLLGQGGFGYV----HK--------GVLTNGKVVAIKQLKAGSGQGEREFQAEI 249
D F LG G FG V HK +L KVV +KQ++ E
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--------EK 93
Query: 250 EIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGS 309
I+ V+ LV L S +V E+V + HL R + P A
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQI 151
Query: 310 ARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
YLH +I+RD+K N+L+D +V DFG AK
Sbjct: 152 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 63/154 (40%), Gaps = 9/154 (5%)
Query: 202 DNFSEANLLGQGGFGY-VHKGVLTNGKVVAIKQLKAGSGQGEREF---QAEIEIISQVHH 257
++F +LG+G F V L + AIK L+ E + E +++S++ H
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 258 RHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLH 317
V L Y TF L + K E + + + L YLH
Sbjct: 90 PFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 147
Query: 318 EDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
IIHRD+K NILL++ ++ DFG AK
Sbjct: 148 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAK 178
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 63/162 (38%), Gaps = 25/162 (15%)
Query: 202 DNFSEANLLGQGGFGYV----HK--------GVLTNGKVVAIKQLKAGSGQGEREFQAEI 249
D F LG G FG V HK +L KVV +KQ++ E
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--------EK 113
Query: 250 EIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGS 309
I+ V+ LV L S +V E+V + HL R + P A
Sbjct: 114 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQI 171
Query: 310 ARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
YLH +I+RD+K N+L+D +V DFG AK
Sbjct: 172 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 210
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 67/156 (42%), Gaps = 13/156 (8%)
Query: 202 DNFSEANLLGQGGFG-YVHKGVLTNGKVVAIKQLKAGSGQGEREF---QAEIEIISQVHH 257
++F +LG+G F V L + AIK L+ E + E +++S++ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 258 RHLVSLVGYCTFGSQRLLVY--EFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAY 315
V L Y TF L + + N L ++ K TR A L Y
Sbjct: 92 PFFVKL--YFTFQDDEKLYFGLSYAKNGCLLKYIR-KIGSFDETCTRFYTA-EIVSALEY 147
Query: 316 LHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
LH IIHRD+K NILL++ ++ DFG AK
Sbjct: 148 LH---GKGIIHRDLKPENILLNEDMHIQITDFGTAK 180
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 68/162 (41%), Gaps = 18/162 (11%)
Query: 202 DNFSEANLLGQGGFGYVHKGVLTNG------KVVAIKQLKAGSGQGEREFQAEIEIISQV 255
D + ++G+G F V + + K+V + + + G + + E I +
Sbjct: 26 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 85
Query: 256 HHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSAR---- 311
H H+V L+ + +V+EF+ L F + R + +A R
Sbjct: 86 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEI--VKRADAGFVYSEAVASHYMRQILE 143
Query: 312 GLAYLHEDCQPKIIHRDIKSANILL---DDSFEAKVADFGLA 350
L Y H++ IIHRD+K +LL ++S K+ FG+A
Sbjct: 144 ALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVA 182
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 72/161 (44%), Gaps = 37/161 (22%)
Query: 210 LGQGGFGYV---HKGVLTNGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSL 263
+G G G V + VL VAIK+L +R ++ E+ ++ V+H++++SL
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHKNIISL 88
Query: 264 VGYCTFGSQRLLVYEFVPNKTLE-FHLHGKDRPVM--NWPTRMKIALGSAR--------- 311
+ F P KTLE F +M N +++ L R
Sbjct: 89 LNV------------FTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQML 136
Query: 312 -GLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
G+ +LH IIHRD+K +NI++ K+ DFGLA+
Sbjct: 137 XGIKHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 66/153 (43%), Gaps = 18/153 (11%)
Query: 210 LGQGGFGYVHK------GVLTNGKVVAIKQLKAGS-GQGEREFQAEIEIISQVHHRHLVS 262
LG G F V K G+ K + +Q +A G E + E+ I+ QV H ++++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 263 LVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTR-MKIALGSARGLAYLHEDCQ 321
L + +L+ E V L L K+ T +K L G+ YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD---GVNYLH---T 133
Query: 322 PKIIHRDIKSANILLDDSF----EAKVADFGLA 350
KI H D+K NI+L D K+ DFGLA
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 72/161 (44%), Gaps = 37/161 (22%)
Query: 210 LGQGGFGYV---HKGVLTNGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSL 263
+G G G V + VL VAIK+L +R ++ E+ ++ V+H++++SL
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 88
Query: 264 VGYCTFGSQRLLVYEFVPNKTLE-FHLHGKDRPVM--NWPTRMKIALGSAR--------- 311
+ F P KTLE F +M N +++ L R
Sbjct: 89 LNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQML 136
Query: 312 -GLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
G+ +LH IIHRD+K +NI++ K+ DFGLA+
Sbjct: 137 CGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 72/161 (44%), Gaps = 37/161 (22%)
Query: 210 LGQGGFGYV---HKGVLTNGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSL 263
+G G G V + VL VAIK+L +R ++ E+ ++ V+H++++SL
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 88
Query: 264 VGYCTFGSQRLLVYEFVPNKTLE-FHLHGKDRPVM--NWPTRMKIALGSAR--------- 311
+ F P KTLE F +M N +++ L R
Sbjct: 89 LNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQML 136
Query: 312 -GLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
G+ +LH IIHRD+K +NI++ K+ DFGLA+
Sbjct: 137 CGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 66/153 (43%), Gaps = 18/153 (11%)
Query: 210 LGQGGFGYVHK------GVLTNGKVVAIKQLKAGS-GQGEREFQAEIEIISQVHHRHLVS 262
LG G F V K G+ K + +Q +A G E + E+ I+ QV H ++++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 263 LVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTR-MKIALGSARGLAYLHEDCQ 321
L + +L+ E V L L K+ T +K L G+ YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD---GVNYLH---T 133
Query: 322 PKIIHRDIKSANILLDDSF----EAKVADFGLA 350
KI H D+K NI+L D K+ DFGLA
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 72/161 (44%), Gaps = 37/161 (22%)
Query: 210 LGQGGFGYV---HKGVLTNGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSL 263
+G G G V + VL VAIK+L +R ++ E+ ++ V+H++++SL
Sbjct: 33 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 89
Query: 264 VGYCTFGSQRLLVYEFVPNKTLE-FHLHGKDRPVM--NWPTRMKIALGSAR--------- 311
+ F P KTLE F +M N +++ L R
Sbjct: 90 LNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQML 137
Query: 312 -GLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
G+ +LH IIHRD+K +NI++ K+ DFGLA+
Sbjct: 138 CGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR 175
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 63/154 (40%), Gaps = 9/154 (5%)
Query: 202 DNFSEANLLGQGGFG-YVHKGVLTNGKVVAIKQLKAGSGQGEREF---QAEIEIISQVHH 257
++F +LG+G F V L + AIK L+ E + E +++S++ H
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 258 RHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLH 317
V L Y TF L + K E + + + L YLH
Sbjct: 74 PFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 131
Query: 318 EDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
IIHRD+K NILL++ ++ DFG AK
Sbjct: 132 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAK 162
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 68/162 (41%), Gaps = 18/162 (11%)
Query: 202 DNFSEANLLGQGGFGYVHKGVLTNG------KVVAIKQLKAGSGQGEREFQAEIEIISQV 255
D + ++G+G F V + + K+V + + + G + + E I +
Sbjct: 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 256 HHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSAR---- 311
H H+V L+ + +V+EF+ L F + R + +A R
Sbjct: 84 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEI--VKRADAGFVYSEAVASHYMRQILE 141
Query: 312 GLAYLHEDCQPKIIHRDIKSANILL---DDSFEAKVADFGLA 350
L Y H++ IIHRD+K +LL ++S K+ FG+A
Sbjct: 142 ALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVA 180
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 72/161 (44%), Gaps = 37/161 (22%)
Query: 210 LGQGGFGYV---HKGVLTNGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSL 263
+G G G V + VL VAIK+L +R ++ E+ ++ V+H++++SL
Sbjct: 70 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 126
Query: 264 VGYCTFGSQRLLVYEFVPNKTLE-FHLHGKDRPVM--NWPTRMKIALGSAR--------- 311
+ F P KTLE F +M N +++ L R
Sbjct: 127 LNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQML 174
Query: 312 -GLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
G+ +LH IIHRD+K +NI++ K+ DFGLA+
Sbjct: 175 CGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR 212
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 72/161 (44%), Gaps = 37/161 (22%)
Query: 210 LGQGGFGYV---HKGVLTNGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSL 263
+G G G V + VL VAIK+L +R ++ E+ ++ V+H++++SL
Sbjct: 31 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 87
Query: 264 VGYCTFGSQRLLVYEFVPNKTLE-FHLHGKDRPVM--NWPTRMKIALGSAR--------- 311
+ F P KTLE F +M N +++ L R
Sbjct: 88 LNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQML 135
Query: 312 -GLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
G+ +LH IIHRD+K +NI++ K+ DFGLA+
Sbjct: 136 CGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR 173
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 62/162 (38%), Gaps = 25/162 (15%)
Query: 202 DNFSEANLLGQGGFGYV----HK--------GVLTNGKVVAIKQLKAGSGQGEREFQAEI 249
D F LG G FG V HK +L KVV +KQ++ E
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--------EK 87
Query: 250 EIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGS 309
I+ V+ LV L S +V E+V + HL R P A
Sbjct: 88 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FXEPHARFYAAQI 145
Query: 310 ARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
YLH +I+RD+K N+L+D +V DFG AK
Sbjct: 146 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 184
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 66/153 (43%), Gaps = 18/153 (11%)
Query: 210 LGQGGFGYVHK------GVLTNGKVVAIKQLKAGS-GQGEREFQAEIEIISQVHHRHLVS 262
LG G F V K G+ K + +Q +A G E + E+ I+ QV H ++++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 263 LVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTR-MKIALGSARGLAYLHEDCQ 321
L + +L+ E V L L K+ T +K L G+ YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD---GVNYLH---T 133
Query: 322 PKIIHRDIKSANILLDDSF----EAKVADFGLA 350
KI H D+K NI+L D K+ DFGLA
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 63/154 (40%), Gaps = 9/154 (5%)
Query: 202 DNFSEANLLGQGGFG-YVHKGVLTNGKVVAIKQLKAGSGQGEREF---QAEIEIISQVHH 257
++F +LG+G F V L + AIK L+ E + E +++S++ H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 258 RHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLH 317
V L Y TF L + K E + + + L YLH
Sbjct: 89 PFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 146
Query: 318 EDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
IIHRD+K NILL++ ++ DFG AK
Sbjct: 147 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAK 177
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 72/161 (44%), Gaps = 37/161 (22%)
Query: 210 LGQGGFGYV---HKGVLTNGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSL 263
+G G G V + VL VAIK+L +R ++ E+ ++ V+H++++SL
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHKNIISL 88
Query: 264 VGYCTFGSQRLLVYEFVPNKTLE-FHLHGKDRPVM--NWPTRMKIALGSAR--------- 311
+ F P KTLE F +M N +++ L R
Sbjct: 89 LNV------------FTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQML 136
Query: 312 -GLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
G+ +LH IIHRD+K +NI++ K+ DFGLA+
Sbjct: 137 CGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 60/162 (37%), Gaps = 25/162 (15%)
Query: 202 DNFSEANLLGQGGFGYVH------------KGVLTNGKVVAIKQLKAGSGQGEREFQAEI 249
D F LG G FG V +L KVV +KQ++ E
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 250 EIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGS 309
I+ V+ LV L S +V E+ P + HL R P A
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR--FXEPHARFYAAQI 150
Query: 310 ARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
YLH +I+RD+K N+++D KV DFG AK
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK 189
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 63/154 (40%), Gaps = 9/154 (5%)
Query: 202 DNFSEANLLGQGGFG-YVHKGVLTNGKVVAIKQLKAGSGQGEREF---QAEIEIISQVHH 257
++F +LG+G F V L + AIK L+ E + E +++S++ H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 258 RHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLH 317
V L Y TF L + K E + + + L YLH
Sbjct: 89 PFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 146
Query: 318 EDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
IIHRD+K NILL++ ++ DFG AK
Sbjct: 147 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAK 177
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 62/162 (38%), Gaps = 25/162 (15%)
Query: 202 DNFSEANLLGQGGFGYV----HK--------GVLTNGKVVAIKQLKAGSGQGEREFQAEI 249
D F LG G FG V HK +L KVV +KQ++ E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 250 EIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGS 309
I+ V+ LV L S +V E+V + HL R P A
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FXEPHARFYAAQI 150
Query: 310 ARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
YLH +I+RD+K N+L+D +V DFG AK
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 72/161 (44%), Gaps = 37/161 (22%)
Query: 210 LGQGGFGYV---HKGVLTNGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSL 263
+G G G V + VL VAIK+L +R ++ E+ ++ V+H++++SL
Sbjct: 33 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 89
Query: 264 VGYCTFGSQRLLVYEFVPNKTLE-FHLHGKDRPVM--NWPTRMKIALGSAR--------- 311
+ F P KTLE F +M N +++ L R
Sbjct: 90 LNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQML 137
Query: 312 -GLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
G+ +LH IIHRD+K +NI++ K+ DFGLA+
Sbjct: 138 CGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 175
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 62/162 (38%), Gaps = 25/162 (15%)
Query: 202 DNFSEANLLGQGGFGYV----HK--------GVLTNGKVVAIKQLKAGSGQGEREFQAEI 249
D F LG G FG V HK +L KVV +KQ++ E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 250 EIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGS 309
I+ V+ LV L S +V E+V + HL R P A
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FXEPHARFYAAQI 150
Query: 310 ARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
YLH +I+RD+K N+L+D +V DFG AK
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 67/160 (41%), Gaps = 16/160 (10%)
Query: 202 DNFSEANLLGQGGFGYVHKGV---LTNGKVVAIKQLKAGSGQGEREFQA-------EIEI 251
+N+ +LG+G V + + V I + G E Q E++I
Sbjct: 4 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 63
Query: 252 ISQVH-HRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSA 310
+ +V H +++ L + LV++ + L +L ++ ++ KI
Sbjct: 64 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL--TEKVTLSEKETRKIMRALL 121
Query: 311 RGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
+ LH + I+HRD+K NILLDD K+ DFG +
Sbjct: 122 EVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFS 158
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 66/153 (43%), Gaps = 18/153 (11%)
Query: 210 LGQGGFGYVHK------GVLTNGKVVAIKQLKAGS-GQGEREFQAEIEIISQVHHRHLVS 262
LG G F V K G+ K + +Q +A G E + E+ I+ QV H ++++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 263 LVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTR-MKIALGSARGLAYLHEDCQ 321
L + +L+ E V L L K+ T +K L G+ YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD---GVNYLH---T 133
Query: 322 PKIIHRDIKSANILLDDSF----EAKVADFGLA 350
KI H D+K NI+L D K+ DFGLA
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 62/162 (38%), Gaps = 25/162 (15%)
Query: 202 DNFSEANLLGQGGFGYV----HK--------GVLTNGKVVAIKQLKAGSGQGEREFQAEI 249
D F LG G FG V HK +L KVV +KQ++ E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 250 EIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGS 309
I+ V+ LV L S +V E+V + HL R P A
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAE--PHARFYAAQI 150
Query: 310 ARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
YLH +I+RD+K N+L+D +V DFG AK
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 66/153 (43%), Gaps = 18/153 (11%)
Query: 210 LGQGGFGYVHK------GVLTNGKVVAIKQLKAGS-GQGEREFQAEIEIISQVHHRHLVS 262
LG G F V K G+ K + +Q +A G E + E+ I+ QV H ++++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 263 LVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTR-MKIALGSARGLAYLHEDCQ 321
L + +L+ E V L L K+ T +K L G+ YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD---GVNYLH---T 133
Query: 322 PKIIHRDIKSANILLDDSF----EAKVADFGLA 350
KI H D+K NI+L D K+ DFGLA
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 72/161 (44%), Gaps = 37/161 (22%)
Query: 210 LGQGGFGYV---HKGVLTNGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSL 263
+G G G V + VL VAIK+L +R ++ E+ ++ V+H++++SL
Sbjct: 26 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 82
Query: 264 VGYCTFGSQRLLVYEFVPNKTLE-FHLHGKDRPVM--NWPTRMKIALGSAR--------- 311
+ F P KTLE F +M N +++ L R
Sbjct: 83 LNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQML 130
Query: 312 -GLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
G+ +LH IIHRD+K +NI++ K+ DFGLA+
Sbjct: 131 CGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR 168
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 72/161 (44%), Gaps = 37/161 (22%)
Query: 210 LGQGGFGYV---HKGVLTNGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSL 263
+G G G V + VL VAIK+L +R ++ E+ ++ V+H++++SL
Sbjct: 25 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 81
Query: 264 VGYCTFGSQRLLVYEFVPNKTLE-FHLHGKDRPVM--NWPTRMKIALGSAR--------- 311
+ F P KTLE F +M N +++ L R
Sbjct: 82 LNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQML 129
Query: 312 -GLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
G+ +LH IIHRD+K +NI++ K+ DFGLA+
Sbjct: 130 CGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR 167
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 67/160 (41%), Gaps = 16/160 (10%)
Query: 202 DNFSEANLLGQGGFGYVHKGV---LTNGKVVAIKQLKAGSGQGEREFQA-------EIEI 251
+N+ +LG+G V + + V I + G E Q E++I
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 252 ISQVH-HRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSA 310
+ +V H +++ L + LV++ + L +L ++ ++ KI
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL--TEKVTLSEKETRKIMRALL 134
Query: 311 RGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
+ LH + I+HRD+K NILLDD K+ DFG +
Sbjct: 135 EVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFS 171
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 62/162 (38%), Gaps = 25/162 (15%)
Query: 202 DNFSEANLLGQGGFGYV----HK--------GVLTNGKVVAIKQLKAGSGQGEREFQAEI 249
D F LG G FG V HK +L KVV +KQ++ E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 250 EIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGS 309
I+ V+ LV L S +V E+V + HL R P A
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FXEPHARFYAAQI 150
Query: 310 ARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
YLH +I+RD+K N+L+D +V DFG AK
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 67/160 (41%), Gaps = 16/160 (10%)
Query: 202 DNFSEANLLGQGGFGYVHKGV---LTNGKVVAIKQLKAGSGQGEREFQA-------EIEI 251
+N+ +LG+G V + + V I + G E Q E++I
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 252 ISQVH-HRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSA 310
+ +V H +++ L + LV++ + L +L ++ ++ KI
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL--TEKVTLSEKETRKIMRALL 134
Query: 311 RGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
+ LH + I+HRD+K NILLDD K+ DFG +
Sbjct: 135 EVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFS 171
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 72/161 (44%), Gaps = 37/161 (22%)
Query: 210 LGQGGFGYV---HKGVLTNGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSL 263
+G G G V + VL VAIK+L +R ++ E+ ++ V+H++++SL
Sbjct: 26 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 82
Query: 264 VGYCTFGSQRLLVYEFVPNKTLE-FHLHGKDRPVM--NWPTRMKIALGSAR--------- 311
+ F P KTLE F +M N +++ L R
Sbjct: 83 LNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQML 130
Query: 312 -GLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
G+ +LH IIHRD+K +NI++ K+ DFGLA+
Sbjct: 131 CGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR 168
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 72/161 (44%), Gaps = 37/161 (22%)
Query: 210 LGQGGFGYV---HKGVLTNGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSL 263
+G G G V + VL VAIK+L +R ++ E+ ++ V+H++++SL
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHKNIISL 88
Query: 264 VGYCTFGSQRLLVYEFVPNKTLE-FHLHGKDRPVM--NWPTRMKIALGSAR--------- 311
+ F P KTLE F +M N +++ L R
Sbjct: 89 LNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQML 136
Query: 312 -GLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
G+ +LH IIHRD+K +NI++ K+ DFGLA+
Sbjct: 137 CGIKHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 62/162 (38%), Gaps = 25/162 (15%)
Query: 202 DNFSEANLLGQGGFGYV----HK--------GVLTNGKVVAIKQLKAGSGQGEREFQAEI 249
D F LG G FG V HK +L KVV +KQ++ E
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--------EK 113
Query: 250 EIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGS 309
I+ V+ LV L S +V E+V + HL R P A
Sbjct: 114 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FXEPHARFYAAQI 171
Query: 310 ARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
YLH +I+RD+K N+L+D +V DFG AK
Sbjct: 172 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 210
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 70/167 (41%), Gaps = 17/167 (10%)
Query: 201 TDNFSEANLLGQGGFGYVHK------GVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQ 254
+DN+ LG+G F V + G+ K++ K+L A Q + + E I +
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQ---KLEREARICRK 84
Query: 255 VHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLA 314
+ H ++V L S LV++ V L + R + +A
Sbjct: 85 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVA--REFYSEADASHCIQQILESIA 142
Query: 315 YLHEDCQPKIIHRDIKSANILLDDSFE---AKVADFGLAKHSLDTDT 358
Y H + I+HR++K N+LL + K+ADFGLA D++
Sbjct: 143 YCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA 186
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 72/161 (44%), Gaps = 37/161 (22%)
Query: 210 LGQGGFGYV---HKGVLTNGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSL 263
+G G G V + VL VAIK+L +R ++ E+ ++ V+H++++SL
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 88
Query: 264 VGYCTFGSQRLLVYEFVPNKTLE-FHLHGKDRPVM--NWPTRMKIALGSAR--------- 311
+ F P KTLE F +M N +++ L R
Sbjct: 89 LNV------------FTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQML 136
Query: 312 -GLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
G+ +LH IIHRD+K +NI++ K+ DFGLA+
Sbjct: 137 XGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 74/170 (43%), Gaps = 19/170 (11%)
Query: 193 TYEELKIATDNFSEANLLGQGGFGYVHK------GVLTNGKVVAIKQLKAGS-GQGEREF 245
T+++ K+ D + LG G F V K G+ K + +Q +A G E
Sbjct: 4 TFKQQKVE-DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEI 62
Query: 246 QAEIEIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTR-MK 304
+ E+ I+ QV H ++++L + +L+ E V L L K+ T +K
Sbjct: 63 EREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIK 122
Query: 305 IALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSF----EAKVADFGLA 350
L G+ YLH KI H D+K NI+L D K+ DFGLA
Sbjct: 123 QILD---GVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 63/162 (38%), Gaps = 25/162 (15%)
Query: 202 DNFSEANLLGQGGFGYV----HK--------GVLTNGKVVAIKQLKAGSGQGEREFQAEI 249
D F LG G FG V HK +L KVV +KQ++ E
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 250 EIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGS 309
I+ V+ LV L S +V E+V + HL R + P A
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQI 150
Query: 310 ARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
YLH +I+RD+K N+++D +V DFG AK
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLIIDQQGYIQVTDFGFAK 189
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 72/161 (44%), Gaps = 37/161 (22%)
Query: 210 LGQGGFGYV---HKGVLTNGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSL 263
+G G G V + VL VAIK+L +R ++ E+ ++ V+H++++SL
Sbjct: 25 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 81
Query: 264 VGYCTFGSQRLLVYEFVPNKTLE-FHLHGKDRPVM--NWPTRMKIALGSAR--------- 311
+ F P KTLE F +M N +++ L R
Sbjct: 82 LNV------------FTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQML 129
Query: 312 -GLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
G+ +LH IIHRD+K +NI++ K+ DFGLA+
Sbjct: 130 XGIKHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLAR 167
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 62/162 (38%), Gaps = 25/162 (15%)
Query: 202 DNFSEANLLGQGGFGYVH------------KGVLTNGKVVAIKQLKAGSGQGEREFQAEI 249
D F LG G FG V +L KVV +K+++ E
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLN--------EK 92
Query: 250 EIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGS 309
I+ V+ LV L S +V E+ P + HL R + P A
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR--FSEPHARFYAAQI 150
Query: 310 ARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
YLH +I+RD+K N+++D +V DFGLAK
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGLAK 189
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 61/162 (37%), Gaps = 25/162 (15%)
Query: 202 DNFSEANLLGQGGFGYVH------------KGVLTNGKVVAIKQLKAGSGQGEREFQAEI 249
D F LG G FG V +L KVV +KQ++ E
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 250 EIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGS 309
I+ V+ LV L S +V E+ P + HL R + P A
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR--FSEPHARFYAAQI 150
Query: 310 ARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
YLH +I+RD+K N+++D +V DFG AK
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGFAK 189
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 62/154 (40%), Gaps = 9/154 (5%)
Query: 202 DNFSEANLLGQGGFG-YVHKGVLTNGKVVAIKQLKAGSGQGEREF---QAEIEIISQVHH 257
++F +LG+G F V L + AIK L+ E + E +++S++ H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 258 RHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLH 317
V L Y F L + K E + + + L YLH
Sbjct: 97 PFFVKL--YFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 154
Query: 318 EDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
IIHRD+K NILL++ ++ DFG AK
Sbjct: 155 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAK 185
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 70/167 (41%), Gaps = 17/167 (10%)
Query: 201 TDNFSEANLLGQGGFGYVHK------GVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQ 254
+DN+ LG+G F V + G+ K++ K+L A Q + + E I +
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQ---KLEREARICRK 61
Query: 255 VHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLA 314
+ H ++V L S LV++ V L + R + +A
Sbjct: 62 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVA--REFYSEADASHCIQQILESIA 119
Query: 315 YLHEDCQPKIIHRDIKSANILLDDSFE---AKVADFGLAKHSLDTDT 358
Y H + I+HR++K N+LL + K+ADFGLA D++
Sbjct: 120 YCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA 163
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 70/167 (41%), Gaps = 17/167 (10%)
Query: 201 TDNFSEANLLGQGGFGYVHK------GVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQ 254
+DN+ LG+G F V + G+ K++ K+L A Q + + E I +
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQ---KLEREARICRK 60
Query: 255 VHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLA 314
+ H ++V L S LV++ V L + R + +A
Sbjct: 61 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVA--REFYSEADASHCIQQILESIA 118
Query: 315 YLHEDCQPKIIHRDIKSANILLDDSFE---AKVADFGLAKHSLDTDT 358
Y H + I+HR++K N+LL + K+ADFGLA D++
Sbjct: 119 YCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA 162
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 61/162 (37%), Gaps = 25/162 (15%)
Query: 202 DNFSEANLLGQGGFGYVH------------KGVLTNGKVVAIKQLKAGSGQGEREFQAEI 249
D F LG G FG V +L KVV +KQ++ E
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--------EK 92
Query: 250 EIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGS 309
I+ V+ LV L S +V E+V + HL R + P A
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQI 150
Query: 310 ARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
YLH +I+RD+K N+L+D +V DFG AK
Sbjct: 151 VLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 60/162 (37%), Gaps = 25/162 (15%)
Query: 202 DNFSEANLLGQGGFGYVH------------KGVLTNGKVVAIKQLKAGSGQGEREFQAEI 249
D F LG G FG V +L KVV +KQ++ E
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--------EK 93
Query: 250 EIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGS 309
I+ V+ L L S +V E+ P + HL R + P A
Sbjct: 94 RILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR--FSEPHARFYAAQI 151
Query: 310 ARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
YLH +I+RD+K N+++D KV DFG AK
Sbjct: 152 VLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK 190
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 60/162 (37%), Gaps = 25/162 (15%)
Query: 202 DNFSEANLLGQGGFGYVH------------KGVLTNGKVVAIKQLKAGSGQGEREFQAEI 249
D F LG G FG V +L KVV +KQ++ E
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--------EK 93
Query: 250 EIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGS 309
I+ V+ L L S +V E+ P + HL R + P A
Sbjct: 94 RILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR--FSEPHARFYAAQI 151
Query: 310 ARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
YLH +I+RD+K N+++D KV DFG AK
Sbjct: 152 VLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK 190
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 70/167 (41%), Gaps = 17/167 (10%)
Query: 201 TDNFSEANLLGQGGFGYVHK------GVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQ 254
+DN+ LG+G F V + G+ K++ K+L A Q + + E I +
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQ---KLEREARICRK 61
Query: 255 VHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLA 314
+ H ++V L S LV++ V L + R + +A
Sbjct: 62 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVA--REFYSEADASHCIQQILESIA 119
Query: 315 YLHEDCQPKIIHRDIKSANILLDDSFE---AKVADFGLAKHSLDTDT 358
Y H + I+HR++K N+LL + K+ADFGLA D++
Sbjct: 120 YCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA 163
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 72/162 (44%), Gaps = 18/162 (11%)
Query: 201 TDNFSEANLLGQGGFGYV--HKGVLTNGKVVAIKQLKAGSGQGEREFQA---EIEIISQV 255
+D + LG G +G V K LT G AIK +K S A E+ ++ Q+
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKLT-GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 78
Query: 256 HHRHLVSLVGYCTFGSQRLLVYEFVPNKTL--EFHLHGKDRPVMNWPTRMKIALGSARGL 313
H +++ L + LV E L E L K V + MK L G
Sbjct: 79 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEV-DAAVIMKQVLS---GT 134
Query: 314 AYLHEDCQPKIIHRDIKSANILLDD-SFEA--KVADFGLAKH 352
YLH + I+HRD+K N+LL+ S +A K+ DFGL+ H
Sbjct: 135 TYLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAH 173
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 73/165 (44%), Gaps = 19/165 (11%)
Query: 200 ATDNFS---------EANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQAEI 249
+TD+FS + ++LG+G V + L + A+K ++ G E+
Sbjct: 2 STDSFSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREV 61
Query: 250 EIISQVH-HRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALG 308
E++ Q HR+++ L+ + + LV+E + ++ H+H R N +
Sbjct: 62 EMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIH--KRRHFNELEASVVVQD 119
Query: 309 SARGLAYLHEDCQPKIIHRDIKSANILLDDSFE---AKVADFGLA 350
A L +LH I HRD+K NIL + + K+ DFGL
Sbjct: 120 VASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFGLG 161
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 69/154 (44%), Gaps = 23/154 (14%)
Query: 210 LGQGGFGYVHKGVLTN-GKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSLVG 265
+G G G V T G VA+K+L +R ++ E+ ++ V+H++++SL+
Sbjct: 32 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYR-ELVLLKCVNHKNIISLLN 90
Query: 266 YCTFGSQR--------LLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLH 317
F Q+ LV E + + D M++ + G+ +LH
Sbjct: 91 --VFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLC-----GIKHLH 143
Query: 318 EDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
IIHRD+K +NI++ K+ DFGLA+
Sbjct: 144 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 78/167 (46%), Gaps = 18/167 (10%)
Query: 207 ANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQA-EIEIISQVHHRHLVSL- 263
+++LGQG V +G G + AIK S + Q E E++ +++H+++V L
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 264 -VGYCTFGSQRLLVYEFVPNKTLEFHL----HGKDRPVMNWPTRMKIALGSARGLAYLHE 318
+ T ++L+ EF P +L L + P + ++ +G G+ +L E
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVG---GMNHLRE 130
Query: 319 DCQPKIIHRDIKSANILL----DDSFEAKVADFGLAKHSLDTDTHVS 361
+ I+HR+IK NI+ D K+ DFG A+ D + VS
Sbjct: 131 N---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVS 174
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 69/154 (44%), Gaps = 23/154 (14%)
Query: 210 LGQGGFGYVHKGVLTN-GKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSLVG 265
+G G G V T G VA+K+L +R ++ E+ ++ V+H++++SL+
Sbjct: 30 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYR-ELVLLKCVNHKNIISLLN 88
Query: 266 YCTFGSQR--------LLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLH 317
F Q+ LV E + + D M++ + G+ +LH
Sbjct: 89 --VFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLC-----GIKHLH 141
Query: 318 EDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
IIHRD+K +NI++ K+ DFGLA+
Sbjct: 142 ---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 172
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 59/162 (36%), Gaps = 25/162 (15%)
Query: 202 DNFSEANLLGQGGFGYVH------------KGVLTNGKVVAIKQLKAGSGQGEREFQAEI 249
D F LG G FG V +L KVV +KQ++ E
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN--------EK 93
Query: 250 EIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGS 309
I+ V+ L L S +V E+ P + HL R P A
Sbjct: 94 RILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR--FXEPHARFYAAQI 151
Query: 310 ARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
YLH +I+RD+K N+++D KV DFG AK
Sbjct: 152 VLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK 190
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 73/172 (42%), Gaps = 21/172 (12%)
Query: 196 ELKIATDNFSEANLLGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGE-----------RE 244
EL ++ + G +G V GV + G VAIK++ G +
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 245 FQAEIEIISQVHHRHLVSL----VGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWP 300
EI +++ HH +++ L V + +L + + L +H D+ ++ P
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIH--DQRIVISP 133
Query: 301 TRMKIALGSAR-GLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
++ + GL LHE ++HRD+ NILL D+ + + DF LA+
Sbjct: 134 QHIQYFMYHILLGLHVLHE---AGVVHRDLHPGNILLADNNDITICDFNLAR 182
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 73/172 (42%), Gaps = 21/172 (12%)
Query: 196 ELKIATDNFSEANLLGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQGE-----------RE 244
EL ++ + G +G V GV + G VAIK++ G +
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 245 FQAEIEIISQVHHRHLVSL----VGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWP 300
EI +++ HH +++ L V + +L + + L +H D+ ++ P
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIH--DQRIVISP 133
Query: 301 TRMKIALGSAR-GLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
++ + GL LHE ++HRD+ NILL D+ + + DF LA+
Sbjct: 134 QHIQYFMYHILLGLHVLHE---AGVVHRDLHPGNILLADNNDITICDFNLAR 182
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 72/162 (44%), Gaps = 18/162 (11%)
Query: 201 TDNFSEANLLGQGGFGYV--HKGVLTNGKVVAIKQLKAGSGQGEREFQA---EIEIISQV 255
+D + LG G +G V K LT G AIK +K S A E+ ++ Q+
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLT-GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 61
Query: 256 HHRHLVSLVGYCTFGSQRLLVYEFVPNKTL--EFHLHGKDRPVMNWPTRMKIALGSARGL 313
H +++ L + LV E L E L K V + MK L G
Sbjct: 62 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEV-DAAVIMKQVLS---GT 117
Query: 314 AYLHEDCQPKIIHRDIKSANILLDD-SFEA--KVADFGLAKH 352
YLH + I+HRD+K N+LL+ S +A K+ DFGL+ H
Sbjct: 118 TYLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAH 156
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 65/148 (43%), Gaps = 11/148 (7%)
Query: 209 LLGQGGFGYVHKG---VLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLVSLVG 265
+LG+G FG V K + V + + + E+E++ ++ H +++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 266 YCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQPKII 325
S +V E L + + R + R+ + S G+ Y+H + I+
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFS--GITYMH---KHNIV 143
Query: 326 HRDIKSANILLDD---SFEAKVADFGLA 350
HRD+K NILL+ + K+ DFGL+
Sbjct: 144 HRDLKPENILLESKEKDCDIKIIDFGLS 171
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 68/155 (43%), Gaps = 11/155 (7%)
Query: 202 DNFSEANLLGQGGFGYVHKG---VLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHR 258
+ ++ +LG+G FG V K + V + + + E+E++ ++ H
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 259 HLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHE 318
+++ L S +V E L + + R + R+ + S G+ Y+H
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFS--GITYMH- 138
Query: 319 DCQPKIIHRDIKSANILLDD---SFEAKVADFGLA 350
+ I+HRD+K NILL+ + K+ DFGL+
Sbjct: 139 --KHNIVHRDLKPENILLESKEKDCDIKIIDFGLS 171
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 68/155 (43%), Gaps = 11/155 (7%)
Query: 202 DNFSEANLLGQGGFGYVHKG---VLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHR 258
+ ++ +LG+G FG V K + V + + + E+E++ ++ H
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 259 HLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHE 318
+++ L S +V E L + + R + R+ + S G+ Y+H
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFS--GITYMH- 138
Query: 319 DCQPKIIHRDIKSANILLDD---SFEAKVADFGLA 350
+ I+HRD+K NILL+ + K+ DFGL+
Sbjct: 139 --KHNIVHRDLKPENILLESKEKDCDIKIIDFGLS 171
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 72/165 (43%), Gaps = 12/165 (7%)
Query: 210 LGQGGFGYVH-KGVLTNGKVVAIKQLKAGSGQGERE-FQAEIEIISQVHHRHLVSLVGYC 267
LG G FG VH ++G IK + Q E +AEIE++ + H +++ +
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF 89
Query: 268 TFGSQRLLVYEFVPN-KTLEFHLHGKDR-PVMNWPTRMKIALGSARGLAYLHEDCQPKII 325
+V E + LE + + R ++ ++ LAY H ++
Sbjct: 90 EDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVV 146
Query: 326 HRDIKSANILLDDS---FEAKVADFGLAKHSLDTDTHVSTRVMGT 367
H+D+K NIL D+ K+ DFGLA+ +D H ST GT
Sbjct: 147 HKDLKPENILFQDTSPHSPIKIIDFGLAE-LFKSDEH-STNAAGT 189
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 77/166 (46%), Gaps = 18/166 (10%)
Query: 207 ANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQA-EIEIISQVHHRHLVSL- 263
+++LGQG V +G G + AIK S + Q E E++ +++H+++V L
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 264 -VGYCTFGSQRLLVYEFVPNKTLEFHL----HGKDRPVMNWPTRMKIALGSARGLAYLHE 318
+ T ++L+ EF P +L L + P + ++ +G G+ +L E
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVG---GMNHLRE 130
Query: 319 DCQPKIIHRDIKSANILL----DDSFEAKVADFGLAKHSLDTDTHV 360
+ I+HR+IK NI+ D K+ DFG A+ D + V
Sbjct: 131 N---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFV 173
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 83/178 (46%), Gaps = 16/178 (8%)
Query: 187 NFKSTFTYEELKIATDNFSEANLLGQGGFGYVHKGVLTNGKVVAIKQLKAGSGQG-EREF 245
+FK + E ++ E +G+G +G+V+K +GK LK G G
Sbjct: 6 DFKVKLSSERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSA 65
Query: 246 QAEIEIISQVHHRHLVSLVGYCTFGSQR--LLVYEFVPNK---TLEFHLHGK-DRPVMNW 299
EI ++ ++ H +++SL + R L++++ + ++FH K ++ +
Sbjct: 66 CREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQL 125
Query: 300 PTRMKIAL--GSARGLAYLHEDCQPKIIHRDIKSANILLD----DSFEAKVADFGLAK 351
P M +L G+ YLH + ++HRD+K ANIL+ + K+AD G A+
Sbjct: 126 PRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFAR 180
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 70/155 (45%), Gaps = 26/155 (16%)
Query: 210 LGQGGFGYVHKGVLTN----GKVVAIKQL--KAGSGQGEREFQAEIEIISQVHHRHLVSL 263
LG G F V VL GK+ A+K + KA G+ E + EI ++ ++ H ++V+L
Sbjct: 30 LGTGAFSEV---VLAEEKATGKLFAVKCIPKKALKGK-ESSIENEIAVLRKIKHENIVAL 85
Query: 264 VGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSAR----GLAYLHED 319
+ LV + V L DR V K A R + YLH
Sbjct: 86 EDIYESPNHLYLVMQLVSGGEL------FDRIVEKGFYTEKDASTLIRQVLDAVYYLH-- 137
Query: 320 CQPKIIHRDIKSANILL---DDSFEAKVADFGLAK 351
+ I+HRD+K N+L D+ + ++DFGL+K
Sbjct: 138 -RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSK 171
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 63/159 (39%), Gaps = 24/159 (15%)
Query: 210 LGQGGFGYVHKGVLTNG------KVVAIKQLKAGSGQGE--------REFQAEIEIISQV 255
LG G +G V NG KV+ Q G + E EI ++ +
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 256 HHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDR-PVMNWPTRMKIALGSARGLA 314
H +++ L LV EF L + + + + MK L G+
Sbjct: 104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILS---GIC 160
Query: 315 YLHEDCQPKIIHRDIKSANILLDDS---FEAKVADFGLA 350
YLH + I+HRDIK NILL++ K+ DFGL+
Sbjct: 161 YLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLS 196
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 27/156 (17%)
Query: 210 LGQGGFGYV---HKGVLTNGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSL 263
+G G G V + +L VAIK+L +R ++ E+ ++ V+H++++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGL 88
Query: 264 VGYCTFGSQRLL--------VYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAY 315
+ F Q+ L V E + + D M++ + G+ +
Sbjct: 89 LN--VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKH 141
Query: 316 LHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
LH IIHRD+K +NI++ K+ DFGLA+
Sbjct: 142 LH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 72/164 (43%), Gaps = 43/164 (26%)
Query: 210 LGQGGFGYV---HKGVLTNGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSL 263
+G G G V + +L VAIK+L +R ++ E+ ++ V+H++++ L
Sbjct: 26 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGL 82
Query: 264 VGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVM------NWPTRMKIALGSAR------ 311
+ F P K+LE +D ++ N +++ L R
Sbjct: 83 LNV------------FTPQKSLE---EFQDVYIVMELMDANLCQVIQMELDHERMSYLLY 127
Query: 312 ----GLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
G+ +LH IIHRD+K +NI++ K+ DFGLA+
Sbjct: 128 QMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 168
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 27/156 (17%)
Query: 210 LGQGGFGYV---HKGVLTNGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSL 263
+G G G V + +L VAIK+L +R ++ E+ ++ V+H++++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGL 88
Query: 264 VGYCTFGSQRLL--------VYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAY 315
+ F Q+ L V E + + D M++ + G+ +
Sbjct: 89 LN--VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKH 141
Query: 316 LHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
LH IIHRD+K +NI++ K+ DFGLA+
Sbjct: 142 LH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 72/164 (43%), Gaps = 43/164 (26%)
Query: 210 LGQGGFGYV---HKGVLTNGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSL 263
+G G G V + +L VAIK+L +R ++ E+ ++ V+H++++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGL 88
Query: 264 VGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVM------NWPTRMKIALGSAR------ 311
+ F P K+LE +D ++ N +++ L R
Sbjct: 89 LNV------------FTPQKSLE---EFQDVYIVMELMDANLCQVIQMELDHERMSYLLY 133
Query: 312 ----GLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
G+ +LH IIHRD+K +NI++ K+ DFGLA+
Sbjct: 134 QMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 27/156 (17%)
Query: 210 LGQGGFGYV---HKGVLTNGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSL 263
+G G G V + +L VAIK+L +R ++ E+ ++ V+H++++ L
Sbjct: 37 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGL 93
Query: 264 VGYCTFGSQRLL--------VYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAY 315
+ F Q+ L V E + + D M++ + G+ +
Sbjct: 94 LN--VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKH 146
Query: 316 LHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
LH IIHRD+K +NI++ K+ DFGLA+
Sbjct: 147 LH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 179
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 17/159 (10%)
Query: 201 TDNFSEANLLGQGGFGYVHKGVLTN------GKVVAIKQLKAGSGQGEREFQAEIEIISQ 254
TD++ LG+G F V + V K++ K+L A Q + + E I
Sbjct: 30 TDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQ---KLEREARICRL 86
Query: 255 VHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLA 314
+ H ++V L + LV++ V L +D + + + + L
Sbjct: 87 LKHPNIVRLHDSISEEGFHYLVFDLVTGGEL-----FEDIVAREYYSEADASHCIHQILE 141
Query: 315 YLHEDCQPKIIHRDIKSANILLDDSFE---AKVADFGLA 350
++ Q I+HRD+K N+LL + K+ADFGLA
Sbjct: 142 SVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLA 180
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 72/164 (43%), Gaps = 43/164 (26%)
Query: 210 LGQGGFGYV---HKGVLTNGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSL 263
+G G G V + +L VAIK+L +R ++ E+ ++ V+H++++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGL 88
Query: 264 VGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVM------NWPTRMKIALGSAR------ 311
+ F P K+LE +D ++ N +++ L R
Sbjct: 89 LNV------------FTPQKSLE---EFQDVYIVMELMDANLSQVIQMELDHERMSYLLY 133
Query: 312 ----GLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
G+ +LH IIHRD+K +NI++ K+ DFGLA+
Sbjct: 134 QMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 27/156 (17%)
Query: 210 LGQGGFGYV---HKGVLTNGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSL 263
+G G G V + +L VAIK+L +R ++ E+ ++ V+H++++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGL 88
Query: 264 VGYCTFGSQRLL--------VYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAY 315
+ F Q+ L V E + + D M++ + G+ +
Sbjct: 89 LN--VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKH 141
Query: 316 LHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
LH IIHRD+K +NI++ K+ DFGLA+
Sbjct: 142 LH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 27/156 (17%)
Query: 210 LGQGGFGYV---HKGVLTNGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSL 263
+G G G V + +L VAIK+L +R ++ E+ ++ V+H++++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGL 88
Query: 264 VGYCTFGSQRLL--------VYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAY 315
+ F Q+ L V E + + D M++ + G+ +
Sbjct: 89 LN--VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKH 141
Query: 316 LHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
LH IIHRD+K +NI++ K+ DFGLA+
Sbjct: 142 LH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 27/156 (17%)
Query: 210 LGQGGFGYV---HKGVLTNGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSL 263
+G G G V + +L VAIK+L +R ++ E+ ++ V+H++++ L
Sbjct: 33 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGL 89
Query: 264 VGYCTFGSQRLL--------VYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAY 315
+ F Q+ L V E + + D M++ + G+ +
Sbjct: 90 LN--VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKH 142
Query: 316 LHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
LH IIHRD+K +NI++ K+ DFGLA+
Sbjct: 143 LH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 175
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 27/156 (17%)
Query: 210 LGQGGFGYV---HKGVLTNGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSL 263
+G G G V + +L VAIK+L +R ++ E+ ++ V+H++++ L
Sbjct: 34 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGL 90
Query: 264 VGYCTFGSQRLL--------VYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAY 315
+ F Q+ L V E + + D M++ + G+ +
Sbjct: 91 LN--VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKH 143
Query: 316 LHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
LH IIHRD+K +NI++ K+ DFGLA+
Sbjct: 144 LH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 176
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 72/164 (43%), Gaps = 19/164 (11%)
Query: 200 ATDNFS---------EANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQAEI 249
+TD+FS + ++LG+G V + L + A+K ++ G E+
Sbjct: 2 STDSFSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREV 61
Query: 250 EIISQVH-HRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALG 308
E++ Q HR+++ L+ + + LV+E + ++ H+H R N +
Sbjct: 62 EMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIH--KRRHFNELEASVVVQD 119
Query: 309 SARGLAYLHEDCQPKIIHRDIKSANILLDDSFE---AKVADFGL 349
A L +LH I HRD+K NIL + + K+ DF L
Sbjct: 120 VASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDL 160
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 35/69 (50%), Gaps = 10/69 (14%)
Query: 289 LHGKDRPVMNWPTRMKIALGSAR----GLAYLHEDCQPKIIHRDIKSANILL--DDSFEA 342
+HG R +++ R K+ R L YLH I HRDIK N L + SFE
Sbjct: 154 IHGF-RESLDFVQREKLISNIMRQIFSALHYLH---NQGICHRDIKPENFLFSTNKSFEI 209
Query: 343 KVADFGLAK 351
K+ DFGL+K
Sbjct: 210 KLVDFGLSK 218
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 72/164 (43%), Gaps = 43/164 (26%)
Query: 210 LGQGGFGYV---HKGVLTNGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSL 263
+G G G V + +L VAIK+L +R ++ E+ ++ V+H++++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGL 88
Query: 264 VGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVM------NWPTRMKIALGSAR------ 311
+ F P K+LE +D ++ N +++ L R
Sbjct: 89 LNV------------FTPQKSLE---EFQDVYIVMELMDANLSQVIQMELDHERMSYLLY 133
Query: 312 ----GLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
G+ +LH IIHRD+K +NI++ K+ DFGLA+
Sbjct: 134 QMLCGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 72/164 (43%), Gaps = 43/164 (26%)
Query: 210 LGQGGFGYV---HKGVLTNGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSL 263
+G G G V + +L VAIK+L +R ++ E+ ++ V+H++++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGL 88
Query: 264 VGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVM------NWPTRMKIALGSAR------ 311
+ F P K+LE +D ++ N +++ L R
Sbjct: 89 LNV------------FTPQKSLE---EFQDVYIVMELMDANLSQVIQMELDHERMSYLLY 133
Query: 312 ----GLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
G+ +LH IIHRD+K +NI++ K+ DFGLA+
Sbjct: 134 QMLCGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 69/157 (43%), Gaps = 18/157 (11%)
Query: 203 NFSEANLLGQGGFG-YVHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHLV 261
+F ++LG G G V++G+ N V + L +RE Q + + H
Sbjct: 25 SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADREVQ-----LLRESDEHPN 79
Query: 262 SLVGYCTFGSQRL--LVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHED 319
+ +CT ++ + E TL+ ++ KD + + + + GLA+LH
Sbjct: 80 VIRYFCTEKDRQFQYIAIELCA-ATLQEYVEQKDFAHLGLEP-ITLLQQTTSGLAHLH-- 135
Query: 320 CQPKIIHRDIKSANILLD-----DSFEAKVADFGLAK 351
I+HRD+K NIL+ +A ++DFGL K
Sbjct: 136 -SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCK 171
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 72/164 (43%), Gaps = 43/164 (26%)
Query: 210 LGQGGFGYV---HKGVLTNGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSL 263
+G G G V + +L VAIK+L +R ++ E+ ++ V+H++++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGL 88
Query: 264 VGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVM------NWPTRMKIALGSAR------ 311
+ F P K+LE +D ++ N +++ L R
Sbjct: 89 LNV------------FTPQKSLE---EFQDVYIVMELMDANLSQVIQMELDHERMSYLLY 133
Query: 312 ----GLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
G+ +LH IIHRD+K +NI++ K+ DFGLA+
Sbjct: 134 QMLVGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 72/164 (43%), Gaps = 43/164 (26%)
Query: 210 LGQGGFGYV---HKGVLTNGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSL 263
+G G G V + +L VAIK+L +R ++ E+ ++ V+H++++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGL 88
Query: 264 VGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVM------NWPTRMKIALGSAR------ 311
+ F P K+LE +D ++ N +++ L R
Sbjct: 89 LNV------------FTPQKSLE---EFQDVYIVMELMDANLSQVIQMELDHERMSYLLY 133
Query: 312 ----GLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
G+ +LH IIHRD+K +NI++ K+ DFGLA+
Sbjct: 134 QMLVGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 72/164 (43%), Gaps = 43/164 (26%)
Query: 210 LGQGGFGYV---HKGVLTNGKVVAIKQLK---AGSGQGEREFQAEIEIISQVHHRHLVSL 263
+G G G V + +L VAIK+L +R ++ E+ ++ V+H++++ L
Sbjct: 32 IGSGAQGIVVAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGL 88
Query: 264 VGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVM------NWPTRMKIALGSAR------ 311
+ F P K+LE +D ++ N +++ L R
Sbjct: 89 LNV------------FTPQKSLE---EFQDVYIVMELMDANLSQVIQMELDHERMSYLLY 133
Query: 312 ----GLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAK 351
G+ +LH IIHRD+K +NI++ K+ DFGLA+
Sbjct: 134 QMLVGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 76/181 (41%), Gaps = 24/181 (13%)
Query: 184 PVGNFKSTFTYEELKIATDNFSEANLLGQGGFGYVHKGVLTNG------KVVAIKQLKAG 237
P+G+ S + K D + + LG G G V K+++ ++ G
Sbjct: 2 PLGSHMSVYP----KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIG 57
Query: 238 SGQGER---EFQAEIEIISQVHHRHLVSLVGYCTFGSQRL-LVYEFVPNKTLEFHLHGKD 293
S + + EIEI+ +++H ++ + + F ++ +V E + L + G
Sbjct: 58 SAREADPALNVETEIEILKKLNHPCIIKIKNF--FDAEDYYIVLELMEGGELFDKVVGNK 115
Query: 294 RPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFE---AKVADFGLA 350
R + T + YLHE+ IIHRD+K N+LL E K+ DFG +
Sbjct: 116 R--LKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHS 170
Query: 351 K 351
K
Sbjct: 171 K 171
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 35.8 bits (81), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 69/158 (43%), Gaps = 15/158 (9%)
Query: 201 TDNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQL--KAGSGQGEREFQAEIEIISQVHH 257
TD + +G+G F V + V L G A K + K S + ++ + E I + H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 258 RHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGL-AYL 316
++V L + LV++ V L +D + + + + L A L
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGEL-----FEDIVAREYYSEADASHCIQQILEAVL 117
Query: 317 HEDC-QPKIIHRDIKSANILLDDSFE---AKVADFGLA 350
H C Q ++HRD+K N+LL + K+ADFGLA
Sbjct: 118 H--CHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLA 153
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 35.8 bits (81), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 70/167 (41%), Gaps = 20/167 (11%)
Query: 198 KIATDNFSEANLLGQGGFGYVHKGVLTNG------KVVAIKQLKAGSGQGER---EFQAE 248
K D + + LG G G V K+++ ++ GS + + E
Sbjct: 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 65
Query: 249 IEIISQVHHRHLVSLVGYCTFGSQRL-LVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIAL 307
IEI+ +++H ++ + + F ++ +V E + L + G R + T
Sbjct: 66 IEILKKLNHPCIIKIKNF--FDAEDYYIVLELMEGGELFDKVVGNKR--LKEATCKLYFY 121
Query: 308 GSARGLAYLHEDCQPKIIHRDIKSANILLDDSFE---AKVADFGLAK 351
+ YLHE+ IIHRD+K N+LL E K+ DFG +K
Sbjct: 122 QMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 165
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 35.8 bits (81), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 81/183 (44%), Gaps = 35/183 (19%)
Query: 203 NFSEANLLGQGGFGYVHKGVLTNGKV----VAIKQLKAGSGQGERE-FQAEIEIISQVHH 257
+F LG+GGFG V + KV AIK+++ + + RE E++ ++++ H
Sbjct: 6 DFEPIQCLGRGGFGVVFEA---KNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEH 62
Query: 258 ----RHLVSLVGYCTF-----GSQRLLVY---EFVPNKTLEFHLHGK------DRPVMNW 299
R+ + + T S ++ +Y + + L+ ++G+ +R V
Sbjct: 63 PGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVC-- 120
Query: 300 PTRMKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTH 359
+ I L A + +LH ++HRD+K +NI KV DFGL ++D D
Sbjct: 121 ---LHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVT-AMDQDEE 173
Query: 360 VST 362
T
Sbjct: 174 EQT 176
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 35.8 bits (81), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 70/167 (41%), Gaps = 20/167 (11%)
Query: 198 KIATDNFSEANLLGQGGFGYVHKGVLTNG------KVVAIKQLKAGSGQGER---EFQAE 248
K D + + LG G G V K+++ ++ GS + + E
Sbjct: 5 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 64
Query: 249 IEIISQVHHRHLVSLVGYCTFGSQRL-LVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIAL 307
IEI+ +++H ++ + + F ++ +V E + L + G R + T
Sbjct: 65 IEILKKLNHPCIIKIKNF--FDAEDYYIVLELMEGGELFDKVVGNKR--LKEATCKLYFY 120
Query: 308 GSARGLAYLHEDCQPKIIHRDIKSANILLDDSFE---AKVADFGLAK 351
+ YLHE+ IIHRD+K N+LL E K+ DFG +K
Sbjct: 121 QMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 164
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 35.8 bits (81), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 70/167 (41%), Gaps = 20/167 (11%)
Query: 198 KIATDNFSEANLLGQGGFGYVHKGVLTNG------KVVAIKQLKAGSGQGER---EFQAE 248
K D + + LG G G V K+++ ++ GS + + E
Sbjct: 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 65
Query: 249 IEIISQVHHRHLVSLVGYCTFGSQRL-LVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIAL 307
IEI+ +++H ++ + + F ++ +V E + L + G R + T
Sbjct: 66 IEILKKLNHPCIIKIKNF--FDAEDYYIVLELMEGGELFDKVVGNKR--LKEATCKLYFY 121
Query: 308 GSARGLAYLHEDCQPKIIHRDIKSANILLDDSFE---AKVADFGLAK 351
+ YLHE+ IIHRD+K N+LL E K+ DFG +K
Sbjct: 122 QMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 165
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 35.8 bits (81), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 70/167 (41%), Gaps = 20/167 (11%)
Query: 198 KIATDNFSEANLLGQGGFGYVHKGVLTNG------KVVAIKQLKAGSGQGER---EFQAE 248
K D + + LG G G V K+++ ++ GS + + E
Sbjct: 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 65
Query: 249 IEIISQVHHRHLVSLVGYCTFGSQRL-LVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIAL 307
IEI+ +++H ++ + + F ++ +V E + L + G R + T
Sbjct: 66 IEILKKLNHPCIIKIKNF--FDAEDYYIVLELMEGGELFDKVVGNKR--LKEATCKLYFY 121
Query: 308 GSARGLAYLHEDCQPKIIHRDIKSANILLDDSFE---AKVADFGLAK 351
+ YLHE+ IIHRD+K N+LL E K+ DFG +K
Sbjct: 122 QMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 165
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 35.4 bits (80), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 20/160 (12%)
Query: 202 DNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREF--QAEIEI-ISQVHH 257
D + +L+G+G FG V K + VAIK +K ++ F QA+IE+ + ++ +
Sbjct: 54 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIK-----NKKAFLNQAQIEVRLLELMN 108
Query: 258 RH-------LVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSA 310
+H +V L + F + LV+E + + + R V TR K A
Sbjct: 109 KHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTR-KFAQQMC 167
Query: 311 RGLAYLHEDCQPKIIHRDIKSANILLDD--SFEAKVADFG 348
L +L + IIH D+K NILL + K+ DFG
Sbjct: 168 TALLFLATP-ELSIIHCDLKPENILLCNPKRXAIKIVDFG 206
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 35.4 bits (80), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 68/158 (43%), Gaps = 11/158 (6%)
Query: 201 TDNFSEANLLGQGGFGY--VHKGVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHR 258
+D + +G G FG + + LT ++VA+K ++ G+ E Q EI + H
Sbjct: 19 SDRYDFVKDIGSGNFGVARLMRDKLTK-ELVAVKYIERGAAIDE-NVQREIINHRSLRHP 76
Query: 259 HLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHE 318
++V + ++ E+ L + R + L S G++Y H
Sbjct: 77 NIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLS--GVSYCH- 133
Query: 319 DCQPKIIHRDIKSANILLDDS--FEAKVADFGLAKHSL 354
+I HRD+K N LLD S K+ DFG +K S+
Sbjct: 134 --SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSV 169
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 35.4 bits (80), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 4/37 (10%)
Query: 311 RGLAYLHEDCQPKIIHRDIKSANILL--DDSFEAKVA 345
+GL YLH C KIIH DIK NIL+ DD++ ++A
Sbjct: 151 QGLDYLHSKC--KIIHTDIKPENILMCVDDAYVRRMA 185
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 35.0 bits (79), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 70/159 (44%), Gaps = 18/159 (11%)
Query: 195 EELKIATDNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQAEIEIIS 253
EE+ AT LG+G FG VH+ G A+K+++ + E E+ +
Sbjct: 90 EEVHWATHQLR----LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAE-----ELMACA 140
Query: 254 QVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSA-RG 312
+ +V L G G + E + +L + K++ + R LG A G
Sbjct: 141 GLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLV--KEQGCLP-EDRALYYLGQALEG 197
Query: 313 LAYLHEDCQPKIIHRDIKSANILL-DDSFEAKVADFGLA 350
L YLH +I+H D+K+ N+LL D A + DFG A
Sbjct: 198 LEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHA 233
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 35.0 bits (79), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 70/159 (44%), Gaps = 18/159 (11%)
Query: 195 EELKIATDNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQAEIEIIS 253
EE+ AT LG+G FG VH+ G A+K+++ + E E+ +
Sbjct: 71 EEVHWATHQLR----LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAE-----ELMACA 121
Query: 254 QVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSA-RG 312
+ +V L G G + E + +L + K++ + R LG A G
Sbjct: 122 GLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLV--KEQGCLP-EDRALYYLGQALEG 178
Query: 313 LAYLHEDCQPKIIHRDIKSANILL-DDSFEAKVADFGLA 350
L YLH +I+H D+K+ N+LL D A + DFG A
Sbjct: 179 LEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHA 214
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 35.0 bits (79), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 67/166 (40%), Gaps = 18/166 (10%)
Query: 198 KIATDNFSEANLLGQGGFGYVHKGVLTNG------KVVAIKQLKAGSGQGER---EFQAE 248
K D + + LG G G V ++++ ++ GS + + E
Sbjct: 131 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETE 190
Query: 249 IEIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALG 308
IEI+ +++H ++ + + +V E + L + G R + T
Sbjct: 191 IEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQ 247
Query: 309 SARGLAYLHEDCQPKIIHRDIKSANILLDDSFE---AKVADFGLAK 351
+ YLHE+ IIHRD+K N+LL E K+ DFG +K
Sbjct: 248 MLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 290
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 35.0 bits (79), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 20/160 (12%)
Query: 202 DNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREF--QAEIEI-ISQVHH 257
D + +L+G+G FG V K + VAIK +K ++ F QA+IE+ + ++ +
Sbjct: 35 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIK-----NKKAFLNQAQIEVRLLELMN 89
Query: 258 RH-------LVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSA 310
+H +V L + F + LV+E + + + R V TR K A
Sbjct: 90 KHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTR-KFAQQMC 148
Query: 311 RGLAYLHEDCQPKIIHRDIKSANILLDD--SFEAKVADFG 348
L +L + IIH D+K NILL + K+ DFG
Sbjct: 149 TALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFG 187
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 35.0 bits (79), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 20/160 (12%)
Query: 202 DNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREF--QAEIEI-ISQVHH 257
D + +L+G+G FG V K + VAIK +K ++ F QA+IE+ + ++ +
Sbjct: 54 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIK-----NKKAFLNQAQIEVRLLELMN 108
Query: 258 RH-------LVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSA 310
+H +V L + F + LV+E + + + R V TR K A
Sbjct: 109 KHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTR-KFAQQMC 167
Query: 311 RGLAYLHEDCQPKIIHRDIKSANILLDD--SFEAKVADFG 348
L +L + IIH D+K NILL + K+ DFG
Sbjct: 168 TALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFG 206
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 34.7 bits (78), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 60/140 (42%), Gaps = 17/140 (12%)
Query: 210 LGQGGFGYVHKGVLTNGK-VVAIKQLKAGSGQGEREFQAEIEIISQVHH--------RHL 260
LG G F V GK VA+K +K+ E EI ++ V + +
Sbjct: 45 LGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALD-EIRLLKSVRNSDPNDPNREMV 103
Query: 261 VSLVGYCTF----GSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYL 316
V L+ G+ +V+E + + L++ + + + P KI +GL YL
Sbjct: 104 VQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQG-LPLPCVKKIIQQVLQGLDYL 162
Query: 317 HEDCQPKIIHRDIKSANILL 336
H C +IIH DIK NILL
Sbjct: 163 HTKC--RIIHTDIKPENILL 180
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 34.7 bits (78), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 60/140 (42%), Gaps = 17/140 (12%)
Query: 210 LGQGGFGYVHKGVLTNGK-VVAIKQLKAGSGQGEREFQAEIEIISQVHH--------RHL 260
LG G F V GK VA+K +K+ E EI ++ V + +
Sbjct: 29 LGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALD-EIRLLKSVRNSDPNDPNREMV 87
Query: 261 VSLVGYCTF----GSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYL 316
V L+ G+ +V+E + + L++ + + + P KI +GL YL
Sbjct: 88 VQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQG-LPLPCVKKIIQQVLQGLDYL 146
Query: 317 HEDCQPKIIHRDIKSANILL 336
H C +IIH DIK NILL
Sbjct: 147 HTKC--RIIHTDIKPENILL 164
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 34.7 bits (78), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 33/194 (17%)
Query: 166 TSGSLDSDKPFPRQSPGMPVGNFKSTFTYEELKIATDNFSEANLLGQGGFGYVHKGVLTN 225
+G D D+ Q P V + YE LK+ +G+G FG V K +
Sbjct: 76 NNGGYDDDQGSYVQVPHDHVA-----YRYEVLKV----------IGKGSFGQVVKAY--D 118
Query: 226 GKV---VAIKQLKAGSGQGEREFQAEIEIISQVHHR------HLVSLVGYCTFGSQRLLV 276
KV VA+K ++ + R+ EI I+ + + +++ ++ TF + +
Sbjct: 119 HKVHQHVALKMVR-NEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMT 177
Query: 277 YEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRDIKSANILL 336
+E + E K + + P K A + L LH++ +IIH D+K NILL
Sbjct: 178 FELLSMNLYELIKKNKFQG-FSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILL 233
Query: 337 DDSFEA--KVADFG 348
+ KV DFG
Sbjct: 234 KQQGRSGIKVIDFG 247
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 34.7 bits (78), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 67/166 (40%), Gaps = 18/166 (10%)
Query: 198 KIATDNFSEANLLGQGGFGYVHKGVLTNG------KVVAIKQLKAGSGQGER---EFQAE 248
K D + + LG G G V ++++ ++ GS + + E
Sbjct: 145 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETE 204
Query: 249 IEIISQVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALG 308
IEI+ +++H ++ + + +V E + L + G R + T
Sbjct: 205 IEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQ 261
Query: 309 SARGLAYLHEDCQPKIIHRDIKSANILLDDSFE---AKVADFGLAK 351
+ YLHE+ IIHRD+K N+LL E K+ DFG +K
Sbjct: 262 MLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 304
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 33/194 (17%)
Query: 166 TSGSLDSDKPFPRQSPGMPVGNFKSTFTYEELKIATDNFSEANLLGQGGFGYVHKGVLTN 225
+G D D+ Q P V + YE LK+ +G+G FG V K +
Sbjct: 76 NNGGYDDDQGSYVQVPHDHV-----AYRYEVLKV----------IGKGSFGQVVKAY--D 118
Query: 226 GKV---VAIKQLKAGSGQGEREFQAEIEIISQVHHR------HLVSLVGYCTFGSQRLLV 276
KV VA+K ++ + R+ EI I+ + + +++ ++ TF + +
Sbjct: 119 HKVHQHVALKMVR-NEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMT 177
Query: 277 YEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRDIKSANILL 336
+E + E K + + P K A + L LH++ +IIH D+K NILL
Sbjct: 178 FELLSMNLYELIKKNKFQG-FSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILL 233
Query: 337 DDSFEA--KVADFG 348
+ KV DFG
Sbjct: 234 KQQGRSGIKVIDFG 247
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 6/44 (13%)
Query: 311 RGLAYLHEDCQPKIIHRDIKSANILLDDSF---EAKVADFGLAK 351
G+ YLH Q I+H D+K NILL + + K+ DFG+++
Sbjct: 142 EGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSR 182
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 17/162 (10%)
Query: 209 LLGQGGFGYVHKGVLTNGKV-VAIKQLKAG--SGQGE----REFQAEIEIISQVH--HRH 259
LLG GGFG V+ G+ + + VAIK ++ S GE E+ ++ +V
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 260 LVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHED 319
++ L+ + +L+ E P + +R + + + H +
Sbjct: 76 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH-N 133
Query: 320 CQPKIIHRDIKSANILLD-DSFEAKVADFG---LAKHSLDTD 357
C ++HRDIK NIL+D + E K+ DFG L K ++ TD
Sbjct: 134 C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD 173
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 33/194 (17%)
Query: 166 TSGSLDSDKPFPRQSPGMPVGNFKSTFTYEELKIATDNFSEANLLGQGGFGYVHKGVLTN 225
+G D D+ Q P V + YE LK+ +G+G FG V K +
Sbjct: 76 NNGGYDDDQGSYVQVPHDHV-----AYRYEVLKV----------IGKGXFGQVVKAY--D 118
Query: 226 GKV---VAIKQLKAGSGQGEREFQAEIEIISQVHHR------HLVSLVGYCTFGSQRLLV 276
KV VA+K ++ + R+ EI I+ + + +++ ++ TF + +
Sbjct: 119 HKVHQHVALKMVR-NEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMT 177
Query: 277 YEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRDIKSANILL 336
+E + E K + + P K A + L LH++ +IIH D+K NILL
Sbjct: 178 FELLSMNLYELIKKNKFQG-FSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILL 233
Query: 337 DDSFEA--KVADFG 348
+ KV DFG
Sbjct: 234 KQQGRSGIKVIDFG 247
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 17/162 (10%)
Query: 209 LLGQGGFGYVHKGVLTNGKV-VAIKQLKAG--SGQGE----REFQAEIEIISQVH--HRH 259
LLG GGFG V+ G+ + + VAIK ++ S GE E+ ++ +V
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 260 LVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHED 319
++ L+ + +L+ E P + +R + + + H +
Sbjct: 90 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH-N 147
Query: 320 CQPKIIHRDIKSANILLD-DSFEAKVADFG---LAKHSLDTD 357
C ++HRDIK NIL+D + E K+ DFG L K ++ TD
Sbjct: 148 C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD 187
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 17/162 (10%)
Query: 209 LLGQGGFGYVHKGVLTNGKV-VAIKQLKAG--SGQGE----REFQAEIEIISQVH--HRH 259
LLG GGFG V+ G+ + + VAIK ++ S GE E+ ++ +V
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 260 LVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHED 319
++ L+ + +L+ E P + +R + + + H +
Sbjct: 90 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH-N 147
Query: 320 CQPKIIHRDIKSANILLD-DSFEAKVADFG---LAKHSLDTD 357
C ++HRDIK NIL+D + E K+ DFG L K ++ TD
Sbjct: 148 C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD 187
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 17/162 (10%)
Query: 209 LLGQGGFGYVHKGVLTNGKV-VAIKQLKAG--SGQGE----REFQAEIEIISQVH--HRH 259
LLG GGFG V+ G+ + + VAIK ++ S GE E+ ++ +V
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 260 LVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHED 319
++ L+ + +L+ E P + +R + + + H +
Sbjct: 91 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH-N 148
Query: 320 CQPKIIHRDIKSANILLD-DSFEAKVADFG---LAKHSLDTD 357
C ++HRDIK NIL+D + E K+ DFG L K ++ TD
Sbjct: 149 C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD 188
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 5/46 (10%)
Query: 307 LGSA-RGLAYLHEDCQPKIIHRDIKSANILL-DDSFEAKVADFGLA 350
LG A GL YLH +I+H D+K+ N+LL D A + DFG A
Sbjct: 156 LGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHA 198
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 17/162 (10%)
Query: 209 LLGQGGFGYVHKGVLTNGKV-VAIKQLKAG--SGQGE----REFQAEIEIISQVH--HRH 259
LLG GGFG V+ G+ + + VAIK ++ S GE E+ ++ +V
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 260 LVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHED 319
++ L+ + +L+ E P + +R + + + H +
Sbjct: 118 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH-N 175
Query: 320 CQPKIIHRDIKSANILLD-DSFEAKVADFG---LAKHSLDTD 357
C ++HRDIK NIL+D + E K+ DFG L K ++ TD
Sbjct: 176 C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD 215
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 5/46 (10%)
Query: 307 LGSA-RGLAYLHEDCQPKIIHRDIKSANILL-DDSFEAKVADFGLA 350
LG A GL YLH +I+H D+K+ N+LL D A + DFG A
Sbjct: 170 LGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHA 212
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 17/162 (10%)
Query: 209 LLGQGGFGYVHKGVLTNGKV-VAIKQLKAG--SGQGE----REFQAEIEIISQVH--HRH 259
LLG GGFG V+ G+ + + VAIK ++ S GE E+ ++ +V
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 260 LVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHED 319
++ L+ + +L+ E P + +R + + + H +
Sbjct: 91 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH-N 148
Query: 320 CQPKIIHRDIKSANILLD-DSFEAKVADFG---LAKHSLDTD 357
C ++HRDIK NIL+D + E K+ DFG L K ++ TD
Sbjct: 149 C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD 188
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 17/162 (10%)
Query: 209 LLGQGGFGYVHKGVLTNGKV-VAIKQLKAG--SGQGE----REFQAEIEIISQVH--HRH 259
LLG GGFG V+ G+ + + VAIK ++ S GE E+ ++ +V
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 260 LVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHED 319
++ L+ + +L+ E P + +R + + + H +
Sbjct: 91 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH-N 148
Query: 320 CQPKIIHRDIKSANILLD-DSFEAKVADFG---LAKHSLDTD 357
C ++HRDIK NIL+D + E K+ DFG L K ++ TD
Sbjct: 149 C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD 188
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 5/46 (10%)
Query: 307 LGSA-RGLAYLHEDCQPKIIHRDIKSANILL-DDSFEAKVADFGLA 350
LG A GL YLH +I+H D+K+ N+LL D A + DFG A
Sbjct: 172 LGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHA 214
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 17/162 (10%)
Query: 209 LLGQGGFGYVHKGVLTNGKV-VAIKQLKAG--SGQGE----REFQAEIEIISQVH--HRH 259
LLG GGFG V+ G+ + + VAIK ++ S GE E+ ++ +V
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 260 LVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHED 319
++ L+ + +L+ E P + +R + + + H +
Sbjct: 103 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH-N 160
Query: 320 CQPKIIHRDIKSANILLD-DSFEAKVADFG---LAKHSLDTD 357
C ++HRDIK NIL+D + E K+ DFG L K ++ TD
Sbjct: 161 C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD 200
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 17/162 (10%)
Query: 209 LLGQGGFGYVHKGVLTNGKV-VAIKQLKAG--SGQGE----REFQAEIEIISQVH--HRH 259
LLG GGFG V+ G+ + + VAIK ++ S GE E+ ++ +V
Sbjct: 50 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 109
Query: 260 LVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHED 319
++ L+ + +L+ E P + +R + + + H +
Sbjct: 110 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH-N 167
Query: 320 CQPKIIHRDIKSANILLD-DSFEAKVADFG---LAKHSLDTD 357
C ++HRDIK NIL+D + E K+ DFG L K ++ TD
Sbjct: 168 C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD 207
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 17/162 (10%)
Query: 209 LLGQGGFGYVHKGVLTNGKV-VAIKQLKAG--SGQGE----REFQAEIEIISQVH--HRH 259
LLG GGFG V+ G+ + + VAIK ++ S GE E+ ++ +V
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 260 LVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHED 319
++ L+ + +L+ E P + +R + + + H +
Sbjct: 104 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH-N 161
Query: 320 CQPKIIHRDIKSANILLD-DSFEAKVADFG---LAKHSLDTD 357
C ++HRDIK NIL+D + E K+ DFG L K ++ TD
Sbjct: 162 C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD 201
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 17/162 (10%)
Query: 209 LLGQGGFGYVHKGVLTNGKV-VAIKQLKAG--SGQGE----REFQAEIEIISQVH--HRH 259
LLG GGFG V+ G+ + + VAIK ++ S GE E+ ++ +V
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 260 LVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHED 319
++ L+ + +L+ E P + +R + + + H +
Sbjct: 104 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH-N 161
Query: 320 CQPKIIHRDIKSANILLD-DSFEAKVADFG---LAKHSLDTD 357
C ++HRDIK NIL+D + E K+ DFG L K ++ TD
Sbjct: 162 C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD 201
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 17/162 (10%)
Query: 209 LLGQGGFGYVHKGVLTNGKV-VAIKQLKAG--SGQGE----REFQAEIEIISQVH--HRH 259
LLG GGFG V+ G+ + + VAIK ++ S GE E+ ++ +V
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 260 LVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHED 319
++ L+ + +L+ E P + +R + + + H +
Sbjct: 103 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH-N 160
Query: 320 CQPKIIHRDIKSANILLD-DSFEAKVADFG---LAKHSLDTD 357
C ++HRDIK NIL+D + E K+ DFG L K ++ TD
Sbjct: 161 C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD 200
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 17/162 (10%)
Query: 209 LLGQGGFGYVHKGVLTNGKV-VAIKQLKAG--SGQGE----REFQAEIEIISQVH--HRH 259
LLG GGFG V+ G+ + + VAIK ++ S GE E+ ++ +V
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 260 LVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHED 319
++ L+ + +L+ E P + +R + + + H +
Sbjct: 104 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH-N 161
Query: 320 CQPKIIHRDIKSANILLD-DSFEAKVADFG---LAKHSLDTD 357
C ++HRDIK NIL+D + E K+ DFG L K ++ TD
Sbjct: 162 C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD 201
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 17/162 (10%)
Query: 209 LLGQGGFGYVHKGVLTNGKV-VAIKQLKAG--SGQGE----REFQAEIEIISQVH--HRH 259
LLG GGFG V+ G+ + + VAIK ++ S GE E+ ++ +V
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 260 LVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHED 319
++ L+ + +L+ E P + +R + + + H +
Sbjct: 103 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH-N 160
Query: 320 CQPKIIHRDIKSANILLD-DSFEAKVADFG---LAKHSLDTD 357
C ++HRDIK NIL+D + E K+ DFG L K ++ TD
Sbjct: 161 C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD 200
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 17/162 (10%)
Query: 209 LLGQGGFGYVHKGVLTNGKV-VAIKQLKAG--SGQGE----REFQAEIEIISQVH--HRH 259
LLG GGFG V+ G+ + + VAIK ++ S GE E+ ++ +V
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 260 LVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHED 319
++ L+ + +L+ E P + +R + + + H +
Sbjct: 103 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH-N 160
Query: 320 CQPKIIHRDIKSANILLD-DSFEAKVADFG---LAKHSLDTD 357
C ++HRDIK NIL+D + E K+ DFG L K ++ TD
Sbjct: 161 C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD 200
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 17/162 (10%)
Query: 209 LLGQGGFGYVHKGVLTNGKV-VAIKQLKAG--SGQGE----REFQAEIEIISQVH--HRH 259
LLG GGFG V+ G+ + + VAIK ++ S GE E+ ++ +V
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 260 LVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHED 319
++ L+ + +L+ E P + +R + + + H +
Sbjct: 76 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH-N 133
Query: 320 CQPKIIHRDIKSANILLD-DSFEAKVADFG---LAKHSLDTD 357
C ++HRDIK NIL+D + E K+ DFG L K ++ TD
Sbjct: 134 C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD 173
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 17/162 (10%)
Query: 209 LLGQGGFGYVHKGVLTNGKV-VAIKQLKAG--SGQGE----REFQAEIEIISQVH--HRH 259
LLG GGFG V+ G+ + + VAIK ++ S GE E+ ++ +V
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 260 LVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHED 319
++ L+ + +L+ E P + +R + + + H +
Sbjct: 75 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH-N 132
Query: 320 CQPKIIHRDIKSANILLD-DSFEAKVADFG---LAKHSLDTD 357
C ++HRDIK NIL+D + E K+ DFG L K ++ TD
Sbjct: 133 C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD 172
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 17/162 (10%)
Query: 209 LLGQGGFGYVHKGVLTNGKV-VAIKQLKAG--SGQGE----REFQAEIEIISQVH--HRH 259
LLG GGFG V+ G+ + + VAIK ++ S GE E+ ++ +V
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 260 LVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHED 319
++ L+ + +L+ E P + +R + + + H +
Sbjct: 104 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH-N 161
Query: 320 CQPKIIHRDIKSANILLD-DSFEAKVADFG---LAKHSLDTD 357
C ++HRDIK NIL+D + E K+ DFG L K ++ TD
Sbjct: 162 C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD 201
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 17/162 (10%)
Query: 209 LLGQGGFGYVHKGVLTNGKV-VAIKQLKAG--SGQGE----REFQAEIEIISQVH--HRH 259
LLG GGFG V+ G+ + + VAIK ++ S GE E+ ++ +V
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 260 LVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHED 319
++ L+ + +L+ E P + +R + + + H +
Sbjct: 118 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH-N 175
Query: 320 CQPKIIHRDIKSANILLD-DSFEAKVADFG---LAKHSLDTD 357
C ++HRDIK NIL+D + E K+ DFG L K ++ TD
Sbjct: 176 C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD 215
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 11/147 (7%)
Query: 210 LGQGGFGYVHKGV-LTNGKVVAIKQL--KAGSGQGEREFQAEIEIISQVHHRHLVSLVGY 266
LG+G F V + V + G+ A K + K S + ++ + E I + H ++V L
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 267 CTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIH 326
+ L+++ V L +D + + + + L + Q ++H
Sbjct: 90 ISEEGHHYLIFDLVTGGEL-----FEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVH 144
Query: 327 RDIKSANILLDDSFE---AKVADFGLA 350
RD+K N+LL + K+ADFGLA
Sbjct: 145 RDLKPENLLLASKLKGAAVKLADFGLA 171
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 12/163 (7%)
Query: 202 DNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRHL 260
+ F +G G FG ++ G + + VAIK + + ++++I I Q +
Sbjct: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYRILQ-GGTGI 65
Query: 261 VSLVGYCTFGSQRLLVYEFV-PNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHED 319
++ + G +LV + + P+ F+ + ++ T + +A + ++H
Sbjct: 66 PNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRK---LSLKTVLMLADQMINRVEFVHSK 122
Query: 320 CQPKIIHRDIKSANILLDDSFEAK---VADFGLAKHSLDTDTH 359
+HRDIK N L+ A + DFGLAK DT TH
Sbjct: 123 S---FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTH 162
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 17/162 (10%)
Query: 209 LLGQGGFGYVHKGVLTNGKV-VAIKQLKAG--SGQGE----REFQAEIEIISQVH--HRH 259
LLG GGFG V+ G+ + + VAIK ++ S GE E+ ++ +V
Sbjct: 63 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 122
Query: 260 LVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHED 319
++ L+ + +L+ E P + +R + + + H +
Sbjct: 123 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH-N 180
Query: 320 CQPKIIHRDIKSANILLD-DSFEAKVADFG---LAKHSLDTD 357
C ++HRDIK NIL+D + E K+ DFG L K ++ TD
Sbjct: 181 C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD 220
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 17/162 (10%)
Query: 209 LLGQGGFGYVHKGVLTNGKV-VAIKQLKAG--SGQGE----REFQAEIEIISQVH--HRH 259
LLG GGFG V+ G+ + + VAIK ++ S GE E+ ++ +V
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 260 LVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHED 319
++ L+ + +L+ E P + +R + + + H +
Sbjct: 76 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH-N 133
Query: 320 CQPKIIHRDIKSANILLD-DSFEAKVADFG---LAKHSLDTD 357
C ++HRDIK NIL+D + E K+ DFG L K ++ TD
Sbjct: 134 C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD 173
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 17/162 (10%)
Query: 209 LLGQGGFGYVHKGVLTNGKV-VAIKQLKAG--SGQGE----REFQAEIEIISQVH--HRH 259
LLG GGFG V+ G+ + + VAIK ++ S GE E+ ++ +V
Sbjct: 38 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 97
Query: 260 LVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHED 319
++ L+ + +L+ E P + +R + + + H +
Sbjct: 98 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH-N 155
Query: 320 CQPKIIHRDIKSANILLD-DSFEAKVADFG---LAKHSLDTD 357
C ++HRDIK NIL+D + E K+ DFG L K ++ TD
Sbjct: 156 C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD 195
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 78/195 (40%), Gaps = 14/195 (7%)
Query: 180 SPGMPVGNFKSTFTYEELKIATDNFSEANLLGQGGFGYVHKGVLTNGKVVAIK--QLKAG 237
S G+ +G ++ + + +S +G GG V + + ++ AIK L+
Sbjct: 8 SSGVDLGT--ENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA 65
Query: 238 SGQGEREFQAEIEIIS--QVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRP 295
Q ++ EI ++ Q H ++ L Y +V E N L L K +
Sbjct: 66 DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKK-KS 123
Query: 296 VMNWPTRMKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSL- 354
+ W + L +H Q I+H D+K AN L+ D K+ DFG+A
Sbjct: 124 IDPWERKSY----WKNMLEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQP 178
Query: 355 DTDTHVSTRVMGTFG 369
DT + V +GT
Sbjct: 179 DTTSVVKDSQVGTVN 193
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 17/162 (10%)
Query: 209 LLGQGGFGYVHKGVLTNGKV-VAIKQLKAG--SGQGE----REFQAEIEIISQVH--HRH 259
LLG GGFG V+ G+ + + VAIK ++ S GE E+ ++ +V
Sbjct: 14 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 73
Query: 260 LVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHED 319
++ L+ + +L+ E P + +R + + + H +
Sbjct: 74 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH-N 131
Query: 320 CQPKIIHRDIKSANILLD-DSFEAKVADFG---LAKHSLDTD 357
C ++HRDIK NIL+D + E K+ DFG L K ++ TD
Sbjct: 132 C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD 171
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 17/162 (10%)
Query: 209 LLGQGGFGYVHKGVLTNGKV-VAIKQLKAG--SGQGE----REFQAEIEIISQVH--HRH 259
LLG GGFG V+ G+ + + VAIK ++ S GE E+ ++ +V
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 260 LVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHED 319
++ L+ + +L+ E P + +R + + + H +
Sbjct: 71 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH-N 128
Query: 320 CQPKIIHRDIKSANILLD-DSFEAKVADFG---LAKHSLDTD 357
C ++HRDIK NIL+D + E K+ DFG L K ++ TD
Sbjct: 129 C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD 168
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 33.1 bits (74), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 17/162 (10%)
Query: 209 LLGQGGFGYVHKGVLTNGKV-VAIKQLKAG--SGQGE----REFQAEIEIISQVH--HRH 259
LLG GGFG V+ G+ + + VAIK ++ S GE E+ ++ +V
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 260 LVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHED 319
++ L+ + +L+ E P + +R + + + H +
Sbjct: 71 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH-N 128
Query: 320 CQPKIIHRDIKSANILLD-DSFEAKVADFG---LAKHSLDTD 357
C ++HRDIK NIL+D + E K+ DFG L K ++ TD
Sbjct: 129 C--GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD 168
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 32.7 bits (73), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 69/170 (40%), Gaps = 12/170 (7%)
Query: 204 FSEANLLGQGGFGYVHKGVLTNGKVVAIK--QLKAGSGQGEREFQAEIEIIS--QVHHRH 259
+S +G GG V + + ++ AIK L+ Q ++ EI ++ Q H
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 117
Query: 260 LVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHED 319
++ L Y +V E N L L K + + W + L +H
Sbjct: 118 IIRLYDYEITDQYIYMVME-CGNIDLNSWLKKK-KSIDPWERKSYWK----NMLEAVHTI 171
Query: 320 CQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSL-DTDTHVSTRVMGTF 368
Q I+H D+K AN L+ D K+ DFG+A DT + V +GT
Sbjct: 172 HQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTV 220
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 32.7 bits (73), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 69/171 (40%), Gaps = 12/171 (7%)
Query: 204 FSEANLLGQGGFGYVHKGVLTNGKVVAIK--QLKAGSGQGEREFQAEIEIIS--QVHHRH 259
+S +G GG V + + ++ AIK L+ Q ++ EI ++ Q H
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 117
Query: 260 LVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHED 319
++ L Y +V E N L L K + + W + L +H
Sbjct: 118 IIRLYDYEITDQYIYMVME-CGNIDLNSWLKKK-KSIDPWERKSYWK----NMLEAVHTI 171
Query: 320 CQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSL-DTDTHVSTRVMGTFG 369
Q I+H D+K AN L+ D K+ DFG+A DT + V +GT
Sbjct: 172 HQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVN 221
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 32.7 bits (73), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 66/159 (41%), Gaps = 17/159 (10%)
Query: 201 TDNFSEANLLGQGGFGYVHK------GVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQ 254
TD + LG+G F V + G K++ K+L S + ++ + E I
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKL---SARDHQKLEREARICRL 59
Query: 255 VHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLA 314
+ H ++V L + LV++ V L +D + + + + L
Sbjct: 60 LKHPNIVRLHDSISEEGFHYLVFDLVTGGEL-----FEDIVAREYYSEADASHCIQQILE 114
Query: 315 YLHEDCQPKIIHRDIKSANILLDDSFE---AKVADFGLA 350
++ I+HRD+K N+LL + K+ADFGLA
Sbjct: 115 SVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA 153
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 71/159 (44%), Gaps = 19/159 (11%)
Query: 201 TDNFSEANLLGQGGFGYVHKGVLT-NGKVVAIKQLKAGSGQGEREFQAEIEIISQVHHRH 259
+D F + LG+G V++ K A+K LK + + + EI ++ ++ H +
Sbjct: 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDK--KIVRTEIGVLLRLSHPN 109
Query: 260 LVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSAR----GLAY 315
++ L ++ LV E V L DR V + A + + +AY
Sbjct: 110 IIKLKEIFETPTEISLVLELVTGGEL------FDRIVEKGYYSERDAADAVKQILEAVAY 163
Query: 316 LHEDCQPKIIHRDIKSANILLDD---SFEAKVADFGLAK 351
LHE+ I+HRD+K N+L K+ADFGL+K
Sbjct: 164 LHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSK 199
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 74/176 (42%), Gaps = 28/176 (15%)
Query: 203 NFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQ--LKAGSGQGEREFQ-----AEIEIISQ 254
NF +G G FG + G L + VAIK +K+ + Q E++ + E + Q
Sbjct: 5 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHLEYRFYKQLSATEGVPQ 64
Query: 255 VHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLA 314
V++ + G +V E + +LE DR T + IA+ +
Sbjct: 65 VYY--------FGPXGKYNAMVLELL-GPSLEDLFDLCDR-TFTLKTVLMIAIQLITRME 114
Query: 315 YLHEDCQPKIIHRDIKSANILL-----DDSFEAKVADFGLAKHSLDTDT--HVSTR 363
Y+H +I+RD+K N L+ + DFGLAK +D +T H+ R
Sbjct: 115 YVH---TKSLIYRDVKPENFLVGRPGTKRQHAIHIIDFGLAKEYIDPETKKHIPYR 167
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 32.7 bits (73), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 69/171 (40%), Gaps = 12/171 (7%)
Query: 204 FSEANLLGQGGFGYVHKGVLTNGKVVAIK--QLKAGSGQGEREFQAEIEIIS--QVHHRH 259
+S +G GG V + + ++ AIK L+ Q ++ EI ++ Q H
Sbjct: 14 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 73
Query: 260 LVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHED 319
++ L Y +V E N L L K + + W + L +H
Sbjct: 74 IIRLYDYEITDQYIYMVME-CGNIDLNSWLKKK-KSIDPWERKSY----WKNMLEAVHTI 127
Query: 320 CQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSL-DTDTHVSTRVMGTFG 369
Q I+H D+K AN L+ D K+ DFG+A DT + V +GT
Sbjct: 128 HQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVN 177
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 32.7 bits (73), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 19/151 (12%)
Query: 210 LGQGGFGYVHKGVLTNGKVV----AIKQLK--AGSGQGEREFQAEIEIISQVHHRHLVSL 263
LG G +G V +L KV AIK ++ + S + E+ ++ + H +++ L
Sbjct: 45 LGSGAYGEV---LLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKL 101
Query: 264 VGYCTFGSQRLLVYE-FVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQP 322
+ LV E + + + +H R N I G+ YLH +
Sbjct: 102 YDFFEDKRNYYLVMECYKGGELFDEIIH---RMKFNEVDAAVIIKQVLSGVTYLH---KH 155
Query: 323 KIIHRDIKSANILLDDSFE---AKVADFGLA 350
I+HRD+K N+LL+ + K+ DFGL+
Sbjct: 156 NIVHRDLKPENLLLESKEKDALIKIVDFGLS 186
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 324 IIHRDIKSANILL---DDSFEAKVADFGLAK 351
++HRD+K N+L +D+ E K+ DFG A+
Sbjct: 127 VVHRDLKPENLLFTDENDNLEIKIIDFGFAR 157
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 32.3 bits (72), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 70/162 (43%), Gaps = 17/162 (10%)
Query: 209 LLGQGGFGYVHKGVLTNGKV-VAIKQLKAG--SGQGE----REFQAEIEIISQVH--HRH 259
LLG GGFG V+ G+ + + VAIK ++ S GE E+ ++ +V
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 260 LVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHED 319
++ L+ + +L+ E P + +R + + + H
Sbjct: 71 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH-- 127
Query: 320 CQPKIIHRDIKSANILLD-DSFEAKVADFG---LAKHSLDTD 357
++HRDIK NIL+D + E K+ DFG L K ++ TD
Sbjct: 128 -NXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD 168
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 32.3 bits (72), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 69/171 (40%), Gaps = 12/171 (7%)
Query: 204 FSEANLLGQGGFGYVHKGVLTNGKVVAIK--QLKAGSGQGEREFQAEIEIIS--QVHHRH 259
+S +G GG V + + ++ AIK L+ Q ++ EI ++ Q H
Sbjct: 11 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 70
Query: 260 LVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHED 319
++ L Y +V E N L L K + + W + L +H
Sbjct: 71 IIRLYDYEITDQYIYMVME-CGNIDLNSWL-KKKKSIDPWERKSY----WKNMLEAVHTI 124
Query: 320 CQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSL-DTDTHVSTRVMGTFG 369
Q I+H D+K AN L+ D K+ DFG+A DT + V +GT
Sbjct: 125 HQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVN 174
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 32.3 bits (72), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 71/175 (40%), Gaps = 13/175 (7%)
Query: 180 SPGMPVGNFKSTFTYEELKIATDNFSEANLLGQGGFGYVHKGVLTNGKVVAIK--QLKAG 237
S G+ +G ++ + + +S +G GG V + + ++ AIK L+
Sbjct: 8 SSGVDLGT--ENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA 65
Query: 238 SGQGEREFQAEIEIIS--QVHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRP 295
Q ++ EI ++ Q H ++ L Y +V E N L L K +
Sbjct: 66 DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKK-KS 123
Query: 296 VMNWPTRMKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLA 350
+ W + L +H Q I+H D+K AN L+ D K+ DFG+A
Sbjct: 124 IDPWERKSY----WKNMLEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIA 173
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 32.3 bits (72), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 86/209 (41%), Gaps = 54/209 (25%)
Query: 197 LKIATDNFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQLKAGSGQGEREFQAEIEIISQV 255
L+ ++ +S LG G FG V + + +GK A+K++ Q R E++I+ +
Sbjct: 2 LETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVL----QDPRYKNRELDIMKVL 57
Query: 256 HHRHLVSLVGY-CTFGSQR-------------------------------------LLVY 277
H +++ LV Y T G + ++
Sbjct: 58 DHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIM 117
Query: 278 EFVPN---KTLE-FHLHGKDRPVMNWPTRMKIALGSARGLAYLHEDCQPKIIHRDIKSAN 333
E+VP+ K L+ F G+ P MN + L R + ++H I HRDIK N
Sbjct: 118 EYVPDTLHKVLKSFIRSGRSIP-MNLISIYIYQL--FRAVGFIH---SLGICHRDIKPQN 171
Query: 334 ILLDDSFEA-KVADFGLAKHSLDTDTHVS 361
+L++ K+ DFG AK + ++ V+
Sbjct: 172 LLVNSKDNTLKLCDFGSAKKLIPSEPSVA 200
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 32.3 bits (72), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Query: 313 LAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGL 349
LA+LH ++H D+K ANI L K+ DFGL
Sbjct: 170 LAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGL 203
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 32.3 bits (72), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 66/159 (41%), Gaps = 17/159 (10%)
Query: 201 TDNFSEANLLGQGGFGYVHK------GVLTNGKVVAIKQLKAGSGQGEREFQAEIEIISQ 254
TD + LG+G F V + G K++ K+L S + ++ + E I
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKL---SARDHQKLEREARICRL 59
Query: 255 VHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLA 314
+ H ++V L + LV++ V L +D + + + + L
Sbjct: 60 LKHPNIVRLHDSISEEGFHYLVFDLVTGGEL-----FEDIVAREYYSEADASHCIQQILE 114
Query: 315 YLHEDCQPKIIHRDIKSANILLDDSFE---AKVADFGLA 350
++ I+HRD+K N+LL + K+ADFGLA
Sbjct: 115 SVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA 153
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 32.3 bits (72), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
Query: 303 MKIALGSARGLAYLHEDCQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSLDTDTHVST 362
+ I + A + +LH ++HRD+K +NI KV DFGL ++D D T
Sbjct: 167 LHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVT-AMDQDEEEQT 222
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 32.3 bits (72), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 66/156 (42%), Gaps = 11/156 (7%)
Query: 201 TDNFSEANLLGQGGFGYVHKGV-LTNGKVVA--IKQLKAGSGQGEREFQAEIEIISQVHH 257
T+ + LG+G F V + V + G+ A I K S + ++ + E I + H
Sbjct: 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKH 69
Query: 258 RHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLH 317
++V L + L+++ V L +D + + + + L +
Sbjct: 70 PNIVRLHDSISEEGHHYLIFDLVTGGEL-----FEDIVAREYYSEADASHCIQQILEAVL 124
Query: 318 EDCQPKIIHRDIKSANILLDDSFE---AKVADFGLA 350
Q ++HR++K N+LL + K+ADFGLA
Sbjct: 125 HCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLA 160
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 32.3 bits (72), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 16/55 (29%)
Query: 310 ARGLAYLHEDCQPKIIHRDIKSANILLDDS--FEAK-----------VADFGLAK 351
A G+A+LH KIIHRD+K NIL+ S F A ++DFGL K
Sbjct: 125 ASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 176
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 32.0 bits (71), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 69/170 (40%), Gaps = 12/170 (7%)
Query: 204 FSEANLLGQGGFGYVHKGVLTNGKVVAIK--QLKAGSGQGEREFQAEIEIIS--QVHHRH 259
+S +G GG V + + ++ AIK L+ Q ++ EI ++ Q H
Sbjct: 10 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 69
Query: 260 LVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLAYLHED 319
++ L Y +V E N L L K + + W + L +H
Sbjct: 70 IIRLYDYEITDQYIYMVME-CGNIDLNSWLKKK-KSIDPWERKSY----WKNMLEAVHTI 123
Query: 320 CQPKIIHRDIKSANILLDDSFEAKVADFGLAKHSL-DTDTHVSTRVMGTF 368
Q I+H D+K AN L+ D K+ DFG+A DT + V +GT
Sbjct: 124 HQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTV 172
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 32.0 bits (71), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 16/55 (29%)
Query: 310 ARGLAYLHEDCQPKIIHRDIKSANILLDDS--FEAK-----------VADFGLAK 351
A G+A+LH KIIHRD+K NIL+ S F A ++DFGL K
Sbjct: 125 ASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 176
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 32.0 bits (71), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 16/55 (29%)
Query: 310 ARGLAYLHEDCQPKIIHRDIKSANILLDDS--FEAK-----------VADFGLAK 351
A G+A+LH KIIHRD+K NIL+ S F A ++DFGL K
Sbjct: 143 ASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 194
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 32.0 bits (71), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 16/55 (29%)
Query: 310 ARGLAYLHEDCQPKIIHRDIKSANILLDDS--FEAK-----------VADFGLAK 351
A G+A+LH KIIHRD+K NIL+ S F A ++DFGL K
Sbjct: 143 ASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 194
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 32.0 bits (71), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 76/176 (43%), Gaps = 28/176 (15%)
Query: 203 NFSEANLLGQGGFGYVHKGV-LTNGKVVAIKQ--LKAGSGQGEREFQAEIEI-----ISQ 254
NF +G G FG + G L + VAIK +K+ + Q E++ ++ I Q
Sbjct: 10 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQ 69
Query: 255 VHHRHLVSLVGYCTFGSQRLLVYEFVPNKTLEFHLHGKDRPVMNWPTRMKIALGSARGLA 314
V++ G C G +V E + +LE DR + T + IA+ +
Sbjct: 70 VYY------FGPC--GKYNAMVLELL-GPSLEDLFDLCDR-TFSLKTVLMIAIQLISRME 119
Query: 315 YLHEDCQPKIIHRDIKSANILL-----DDSFEAKVADFGLAKHSLDTDT--HVSTR 363
Y+H +I+RD+K N L+ + DFGLAK +D +T H+ R
Sbjct: 120 YVHS---KNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLAKEYIDPETKKHIPYR 172
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 32.0 bits (71), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 8/45 (17%)
Query: 312 GLAYLHEDCQPKIIHRDIKSANILLD--DS----FEAKVADFGLA 350
GL Y+H C IIH DIK N+L++ DS + K+AD G A
Sbjct: 143 GLDYMHRRC--GIIHTDIKPENVLMEIVDSPENLIQIKIADLGNA 185
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 32.0 bits (71), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 4/38 (10%)
Query: 324 IIHRDIKSANILLD-DSFEAKVADFG---LAKHSLDTD 357
++HRDIK NIL+D + E K+ DFG L K ++ TD
Sbjct: 135 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD 172
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 32.0 bits (71), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 4/38 (10%)
Query: 324 IIHRDIKSANILLD-DSFEAKVADFG---LAKHSLDTD 357
++HRDIK NIL+D + E K+ DFG L K ++ TD
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD 215
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 32.0 bits (71), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 8/45 (17%)
Query: 312 GLAYLHEDCQPKIIHRDIKSANILLD--DS----FEAKVADFGLA 350
GL Y+H C IIH DIK N+L++ DS + K+AD G A
Sbjct: 143 GLDYMHRRC--GIIHTDIKPENVLMEIVDSPENLIQIKIADLGNA 185
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.135 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,275,262
Number of Sequences: 62578
Number of extensions: 422149
Number of successful extensions: 2621
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 836
Number of HSP's successfully gapped in prelim test: 217
Number of HSP's that attempted gapping in prelim test: 1107
Number of HSP's gapped (non-prelim): 1101
length of query: 369
length of database: 14,973,337
effective HSP length: 100
effective length of query: 269
effective length of database: 8,715,537
effective search space: 2344479453
effective search space used: 2344479453
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 52 (24.6 bits)