Query 017562
Match_columns 369
No_of_seqs 254 out of 945
Neff 5.8
Searched_HMMs 46136
Date Fri Mar 29 09:41:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017562.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017562hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02171 endoglucanase 100.0 2.6E-94 5.7E-99 755.3 35.1 361 1-369 269-629 (629)
2 PLN02340 endoglucanase 100.0 3E-86 6.5E-91 693.0 26.2 341 1-367 268-614 (614)
3 PLN00119 endoglucanase 100.0 8.6E-67 1.9E-71 534.4 19.7 217 9-226 273-489 (489)
4 PLN02420 endoglucanase 100.0 3.5E-66 7.5E-71 533.8 20.7 229 1-229 280-510 (525)
5 PLN02266 endoglucanase 100.0 3.4E-66 7.5E-71 532.3 19.9 219 8-231 290-509 (510)
6 PLN02175 endoglucanase 100.0 9.8E-66 2.1E-70 525.6 20.4 217 7-228 264-481 (484)
7 PLN02308 endoglucanase 100.0 5.7E-65 1.2E-69 522.2 20.0 217 6-227 270-487 (492)
8 PLN02345 endoglucanase 100.0 1.4E-64 2.9E-69 516.8 20.1 216 8-228 241-461 (469)
9 PLN02613 endoglucanase 100.0 6.4E-64 1.4E-68 514.6 19.8 219 8-231 264-484 (498)
10 PLN02909 Endoglucanase 100.0 1.5E-63 3.2E-68 510.3 18.6 213 9-227 272-485 (486)
11 PLN03009 cellulase 100.0 1.5E-59 3.3E-64 483.4 19.7 217 8-229 275-492 (495)
12 PF00759 Glyco_hydro_9: Glycos 100.0 1.6E-45 3.4E-50 374.1 9.2 188 10-223 257-444 (444)
13 PF09478 CBM49: Carbohydrate b 99.9 1.8E-22 3.8E-27 161.0 10.6 79 277-355 1-80 (80)
14 PF00553 CBM_2: Cellulose bind 99.0 8.9E-10 1.9E-14 91.4 5.9 77 277-357 1-85 (101)
15 smart00637 CBD_II CBD_II domai 98.5 4.9E-07 1.1E-11 73.4 8.5 68 285-356 2-78 (92)
16 COG5297 CelA Cellobiohydrolase 96.8 0.0051 1.1E-07 61.9 8.3 75 275-354 462-542 (544)
17 PF06483 ChiC: Chitinase C; I 96.7 0.0075 1.6E-07 55.1 8.1 87 276-364 35-153 (180)
18 PF09624 DUF2393: Protein of u 87.3 4.2 9.1E-05 35.6 8.8 71 295-366 64-147 (149)
19 PF10633 NPCBM_assoc: NPCBM-as 76.0 6.2 0.00013 30.6 4.9 54 295-356 7-60 (78)
20 PF01299 Lamp: Lysosome-associ 69.6 1.1E+02 0.0025 29.9 13.3 32 332-368 164-195 (306)
21 PF05753 TRAP_beta: Translocon 58.8 63 0.0014 29.7 8.5 76 276-356 22-97 (181)
22 PF11611 DUF4352: Domain of un 55.2 81 0.0018 25.8 8.0 65 285-353 26-98 (123)
23 TIGR01451 B_ant_repeat conserv 54.2 21 0.00046 26.0 3.8 22 294-315 13-34 (53)
24 PF07705 CARDB: CARDB; InterP 47.4 1.3E+02 0.0028 23.2 8.7 52 295-357 21-72 (101)
25 PF14796 AP3B1_C: Clathrin-ada 38.9 55 0.0012 29.2 4.6 67 275-349 67-133 (145)
26 PF01345 DUF11: Domain of unkn 37.5 50 0.0011 25.2 3.7 40 275-315 24-63 (76)
27 KOG3865 Arrestin [Signal trans 31.6 46 0.001 33.6 3.2 43 275-318 193-235 (402)
28 PF01690 PLRV_ORF5: Potato lea 28.9 2.1E+02 0.0046 30.3 7.6 24 302-328 82-105 (465)
29 COG2967 ApaG Uncharacterized p 26.8 1.3E+02 0.0028 26.2 4.7 50 291-350 26-83 (126)
30 COG1470 Predicted membrane pro 26.0 1E+02 0.0022 32.8 4.6 51 295-353 399-449 (513)
31 PF03173 CHB_HEX: Putative car 25.5 2.7E+02 0.0059 25.2 6.9 71 293-365 30-120 (164)
32 COG3889 Predicted solute bindi 25.4 50 0.0011 37.0 2.4 34 108-141 644-681 (872)
33 PF14263 DUF4354: Domain of un 25.3 3.4E+02 0.0073 23.7 7.1 72 277-353 29-104 (124)
34 PF08626 TRAPPC9-Trs120: Trans 24.5 2.3E+02 0.0049 33.4 7.7 65 293-359 799-882 (1185)
35 PF06052 3-HAO: 3-hydroxyanthr 23.5 34 0.00073 30.8 0.6 11 184-194 34-44 (151)
36 PF03896 TRAP_alpha: Transloco 23.5 2.8E+02 0.0061 27.4 7.1 59 294-355 100-159 (285)
37 COG3889 Predicted solute bindi 22.3 45 0.00098 37.3 1.4 11 183-193 728-738 (872)
38 PRK09752 adhesin; Provisional 21.1 80 0.0017 37.1 3.1 11 358-368 1053-1063(1250)
No 1
>PLN02171 endoglucanase
Probab=100.00 E-value=2.6e-94 Score=755.27 Aligned_cols=361 Identities=77% Similarity=1.287 Sum_probs=321.2
Q ss_pred CCCCCCCCceeecccchhHHHHHhhhhhccCCCCCchHHHHHHHHHHHHhhhhhcCCCCCceeeCCCcceeccCCCcHHH
Q 017562 1 MGGTGWGMTEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYFMCSCLGKGSRNVQKTPGGLIFRQRWNNMQF 80 (369)
Q Consensus 1 ~~~~~~~~~~fsWD~K~~gv~vLla~~~~~~~~~~~~~~~~~y~~~ae~~~c~~l~~~~~~~~~TpgGl~~~~~Wgs~~y 80 (369)
++|.+|.+.+|+||+|++|+++||++++++++.+.+...+++|+++||.|+|++++++...+.+|||||+|+++||+|||
T Consensus 269 ~~~~~~~~~~f~WD~k~~G~~~L~a~~~~~~~~~~~~~~~~~y~~~ad~~~~~~l~~~~~~~~~TpgGl~~~~~Wgs~~y 348 (629)
T PLN02171 269 LGGTGWSMTEFGWDVKYAGVQVLVAKFLMQGKAGEHAAVFQRYQQKAEFFMCSCLGKGARNVQKTPGGLIYRQRWNNMQF 348 (629)
T ss_pred hccCcccCccccccccchHHHHHHHHHHhcCCccchhhHHHHHHHHHHHHHHhhccCCCceeeecCCeeEEECCCChHHH
Confidence 46788998999999999999999999987666667788899999999999999998866679999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhcCCccccCCCCCChHHHHHHHHhcchhhhCCCCCCceeEEeeCCCCCCCccccccccccccCC
Q 017562 81 VTSASFLATVYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVN 160 (369)
Q Consensus 81 ~an~Afl~~~ya~~l~~~~~~~~c~~~~~~~~~~~~~A~~QidYiLG~Np~~~SyvvG~G~~~P~~pHHR~ss~p~~~~~ 160 (369)
++|+|||+++|+|++.++++.++|+.....+++|++||++|||||||+||+++|||||||+|+|+|||||+||||+++.+
T Consensus 349 ~~naafl~~vyad~~~~~~~~~~c~~~~~~~~~y~~fA~~QidYiLG~Np~~~SYvVGyG~n~P~~pHHR~as~~~~~~~ 428 (629)
T PLN02171 349 VTSASFLLTVYSDYLASSGRALRCAAGNAAPSQLLAFAKSQVDYILGDNPRATSYMVGYGANYPRQVHHRGSSIVSIKVD 428 (629)
T ss_pred HHHHHHHHHHHHHHhhhcccccccccccCCHHHHHHHHHHhhhhhcCCCCCCCceEeecCCCCCCCcccccccCCccccC
Confidence 99999999999999988877899998888999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCCccccccCCCCCCCCccceeecCCCCCCCcccccCcccccccccCCCchHHHHHHHHhhcCCCCCCcccccc
Q 017562 161 PSFVSCRGGYATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNYEQTEPATYNNAPILGILARLNAGHGGYNQLLPVIV 240 (369)
Q Consensus 161 p~~~~C~~G~~~~~~~~~~np~vl~GAlVGGPd~~D~f~D~r~~y~~nEvaid~NA~~vg~lA~l~~~~~~~~~~~~~~~ 240 (369)
|.+++|.+||+.|++++.||||+|+||||||||++|.|.|+|+||++|||||||||||||+||+|...++++.+.+.. .
T Consensus 429 ~~~~~C~~g~~~~~~~~~~np~vl~GAlVGGPd~~D~y~D~r~~y~~nEva~d~NA~~vg~lA~l~~~~~~~~~~~~~-~ 507 (629)
T PLN02171 429 PSFVSCRGGYATWFSRKGSDPNLLTGAIVGGPDAYDNFADERDNYEQTEPATYNNAPLLGVLARLAGGHGGYNQLLVV-V 507 (629)
T ss_pred ccccCCCCccchhccCCCCCCCcccCceecCCCcCCCCCccccccccCceeEecchHHHHHHHHHHhhcCCccccccc-c
Confidence 999999999999999999999999999999999999999999999999999999999999999999988888765511 1
Q ss_pred CCCCCcccCCCCCCCCCCCCCCCCCCCCCCCCCCCceEEEEeeecccccCCeEEEEEEEEEEeCCCcceeeeEEEeccCC
Q 017562 241 PAATPVVTKPSPAPKPKTIPPTKPKTTPAPASSSGAIAIQQKLTTSWISNGKRYYRYSTIVTNKSAKTLKNLKLSISKLY 320 (369)
Q Consensus 241 ~~~~~~~~~~~~t~~p~~~~~~~p~~tp~~~~~~~~v~i~q~v~~sW~~gg~~y~q~~VtI~N~g~~~I~~~~i~~~~l~ 320 (369)
+.|.++.....|. |. .|..||.|..+..+|+|+|+++++|.++++.|+||+|+|+|++.++||+++|.+++++
T Consensus 508 ~~~~~~~~~~~~~--~~-----~~~~~~~~~~~~~ei~i~q~v~~sW~~~g~~y~qy~v~I~N~s~~~ik~i~i~~~~~~ 580 (629)
T PLN02171 508 PAPSEVAINRTPA--PQ-----RRPPTPAPASTSSPIEIEQKATASWKAKGRTYYRYSTTVTNRSAKTLKELHLGISKLY 580 (629)
T ss_pred CCccccccccCCC--CC-----CCcccCCCccCcceeEEEEEEEEEEEcCCceEEEEEEEEEECCCCceeeeeeeecccc
Confidence 1122222222111 11 1111222222335899999999999999999999999999999999999999999988
Q ss_pred CCccccEEcCCeeecCCCcccCCCCCeEEEEEEeCCCCceEEEEeEEeC
Q 017562 321 GPLWGLTNLGNAYGFPSWLNNLAAGKSLEFVYIHTANAADVSVSAYTLA 369 (369)
Q Consensus 321 ~~iWnv~~~~n~~tLPs~~~~I~~G~s~~FGYI~~g~~a~l~V~~~~~~ 369 (369)
.+||||++.+|+|+||+|+.+|++|++++||||+++.+|+|+|++|.|+
T Consensus 581 ~~iW~v~~~~ngytlPs~~~sL~aG~s~tFgyI~~~~pA~~~v~~y~~~ 629 (629)
T PLN02171 581 GPLWGLTKAGYGYVLPSWMPSLPAGKSLEFVYVHSASPADVWVSGYKLA 629 (629)
T ss_pred ccchheeecCCcccCchhhcccCCCCeeEEEeecCCCCceEEEEEEEeC
Confidence 9999999988999999999999999999999999966999999999874
No 2
>PLN02340 endoglucanase
Probab=100.00 E-value=3e-86 Score=692.95 Aligned_cols=341 Identities=49% Similarity=0.951 Sum_probs=305.4
Q ss_pred CCCCCCCCceeecccchhHHHHHhhhhhccCCCCCchHHHHHHHHHHHHhhhhhcCC-CCCceeeCCCcceeccCCCcHH
Q 017562 1 MGGTGWGMTEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYFMCSCLGK-GSRNVQKTPGGLIFRQRWNNMQ 79 (369)
Q Consensus 1 ~~~~~~~~~~fsWD~K~~gv~vLla~~~~~~~~~~~~~~~~~y~~~ae~~~c~~l~~-~~~~~~~TpgGl~~~~~Wgs~~ 79 (369)
++|.+|...+|+||||++|+++||++++.+++...+...+++|+++||+|+|+++++ .+..+.+||+||+|.++|||+|
T Consensus 268 ~~~~~~~~~~f~WD~k~~g~~~lla~~~~~~~~~~~~~~~~~~~~~ad~~~~~~~~~~~g~~v~~TpgGl~~~~~Wgn~r 347 (614)
T PLN02340 268 MGGTGWAVKEFSWDNKYAGVQILLSKILLEGRGGAYTSTLKQYQAKADYFACACLQKNGGYNIQLTPGGLMYVREWNNLQ 347 (614)
T ss_pred cccccccCCcCCccchhhHHHHHHHHHhhcCCcchhHHHHHHHHHHHHHHHHhhhccCCCCccccCCCceEEeCCCChHH
Confidence 467888888999999999999999998876655567788899999999999999887 4567999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhcCCccccCCCCCChHHHHHHHHhcchhhhCCCCCCceeEEeeCCCCCCCccccccccccccC
Q 017562 80 FVTSASFLATVYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKV 159 (369)
Q Consensus 80 y~an~Afl~~~ya~~l~~~~~~~~c~~~~~~~~~~~~~A~~QidYiLG~Np~~~SyvvG~G~~~P~~pHHR~ss~p~~~~ 159 (369)
|++|+|||+++|+|+++++++.++|+++.+++++|++||++|||||||+||+++|||||||+|+|+|||||+||||++..
T Consensus 348 ya~~aafl~~vyad~l~~~~~~~~c~~~~~~~~~y~~fA~sQidYiLG~NP~~~SYVVGyG~n~P~~pHHR~as~~~~~~ 427 (614)
T PLN02340 348 YASSAAFLLAVYSDYLSAANAKLRCPDGLVQPQELLDFARSQADYILGKNPKGMSYMVGYGPKYPIHVHHRGSSIPSIFA 427 (614)
T ss_pred HHHHHHHHHHHHHHHhhhcccccccCccccCHHHHHHHHHHhhHhhcCCCCCCCceEeccCCCCCCccccccccCCcccc
Confidence 99999999999999998888889999988899999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCCccccccCCCCCCCCccceeecCCCCCCCcccccCcccccccccCCCchHHHHHHHHhhcC---CCCCCcc
Q 017562 160 NPSFVSCRGGYATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNYEQTEPATYNNAPILGILARLNAGH---GGYNQLL 236 (369)
Q Consensus 160 ~p~~~~C~~G~~~~~~~~~~np~vl~GAlVGGPd~~D~f~D~r~~y~~nEvaid~NA~~vg~lA~l~~~~---~~~~~~~ 236 (369)
++.+|+|.+||++|++++.+|||+|+||||||||.+|+|.|+|+||++|||||||||||||+||+|.... +++.+
T Consensus 428 ~~~~v~c~~g~~~~~~~~~~np~vL~GALVGGPd~~D~y~D~r~~y~~nEvAidyNAplvg~lA~L~~~~~~~~~~~~-- 505 (614)
T PLN02340 428 LHSTVGCVQGFDSWYRRKEADPNVIYGALVGGPDANDNFSDDRSNYEQTEPTLSGNAPLVGLFAKLQSASETADAYGS-- 505 (614)
T ss_pred ccccccCcccccccccCCCCCCCCCCCceeeCCCCCCCCCccccccccccceeehhHHHHHHHHHHHhcccccccccc--
Confidence 9999999999999999999999999999999999999999999999999999999999999999999742 23322
Q ss_pred ccccCCCCCcccCCCCCCCCCCCCCCCCCCCCCCCCCCCceEEEEeeecccccCCeEEEEEEEEEEeCCCcceeeeEEEe
Q 017562 237 PVIVPAATPVVTKPSPAPKPKTIPPTKPKTTPAPASSSGAIAIQQKLTTSWISNGKRYYRYSTIVTNKSAKTLKNLKLSI 316 (369)
Q Consensus 237 ~~~~~~~~~~~~~~~~t~~p~~~~~~~p~~tp~~~~~~~~v~i~q~v~~sW~~gg~~y~q~~VtI~N~g~~~I~~~~i~~ 316 (369)
. ++.|.-.| |...+ .+++|.|+++++|..++++|+|+.|+|+|++.++|+.++|.+
T Consensus 506 ----~-----------~~~~~~~~-------~~~~~--~~~e~~~~~~~sw~~~g~~y~~~~v~i~N~s~~pi~~l~~~~ 561 (614)
T PLN02340 506 ----Y-----------KPTPNTSS-------PKQSG--APVEFVHSITNTWTAGGTTYYRHKVIIKNKSQKPITDLKLVI 561 (614)
T ss_pred ----C-----------CCCCCCCC-------cccCC--CchhhhhhheeeeecCCceEEEEEEEEEeCCCCCchhhhhhh
Confidence 0 00000000 11112 357788999999999999999999999999999999999999
Q ss_pred ccCCCCccccEE--cCCeeecCCCcccCCCCCeEEEEEEeCCCCceEEEEeEE
Q 017562 317 SKLYGPLWGLTN--LGNAYGFPSWLNNLAAGKSLEFVYIHTANAADVSVSAYT 367 (369)
Q Consensus 317 ~~l~~~iWnv~~--~~n~~tLPs~~~~I~~G~s~~FGYI~~g~~a~l~V~~~~ 367 (369)
.+++.+||||++ ..++|+||+|+.+|++|++++|+||+.+++++++|.+|+
T Consensus 562 ~~l~g~lwgl~~~~~~~~y~~p~~~~tl~~g~~~~f~yi~~~~~~~~~~~~y~ 614 (614)
T PLN02340 562 EDLSGPIWGLNPTKEKNTYELPQWQKVLQPGSQLSFVYVQGGPQAKVSVLSYN 614 (614)
T ss_pred hhcccchhcceeccccCCccCchhhhccCCCCeeEEEeccCCcchheeccccC
Confidence 999899999984 358899999999999999999999988889999999885
No 3
>PLN00119 endoglucanase
Probab=100.00 E-value=8.6e-67 Score=534.44 Aligned_cols=217 Identities=49% Similarity=0.948 Sum_probs=204.0
Q ss_pred ceeecccchhHHHHHhhhhhccCCCCCchHHHHHHHHHHHHhhhhhcCCCCCceeeCCCcceeccCCCcHHHHHHHHHHH
Q 017562 9 TEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYFMCSCLGKGSRNVQKTPGGLIFRQRWNNMQFVTSASFLA 88 (369)
Q Consensus 9 ~~fsWD~K~~gv~vLla~~~~~~~~~~~~~~~~~y~~~ae~~~c~~l~~~~~~~~~TpgGl~~~~~Wgs~~y~an~Afl~ 88 (369)
.+|+||||++|++|||+|++..++. ...+.++.|++.+|.|+|.+++++...+.+||+||+|++.||++||++|+|||+
T Consensus 273 ~~f~Wd~k~~g~~vlLa~l~~~~~~-~~~~~~~~y~~~ae~~~~~~~~~~~~~~~~TpgGl~~~~~wg~~ry~~~~afla 351 (489)
T PLN00119 273 TVFAWDDKFVGAQVLVAKLALEGKV-ESNGKIVEYKSMAEQFICNCAQKGSNNVKKTPGGLLWFLPWNNLQYTTAASFVL 351 (489)
T ss_pred cccChhhhHHHHHHHHHHHhccCCC-cchHHHHHHHHHHHHHHHhhccCCCccceecCCeeEEecCCccHHHHHHHHHHH
Confidence 4699999999999999999765442 345667899999999999998875567899999999999999999999999999
Q ss_pred HHHHHHhhhcCCccccCCCCCChHHHHHHHHhcchhhhCCCCCCceeEEeeCCCCCCCccccccccccccCCCCccccCC
Q 017562 89 TVYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCRG 168 (369)
Q Consensus 89 ~~ya~~l~~~~~~~~c~~~~~~~~~~~~~A~~QidYiLG~Np~~~SyvvG~G~~~P~~pHHR~ss~p~~~~~p~~~~C~~ 168 (369)
++|+||+.+++..++|++..+.+++|++||++|||||||+||+++|||||||+|+|+|||||+||||++++++.+++|.+
T Consensus 352 ~~ya~yl~~~~~~~~c~~~~~~~~~~~~fA~~QidYiLG~NP~~~SYvVGyG~n~P~~pHHR~as~~~~~~~~~~~~c~~ 431 (489)
T PLN00119 352 SAYSKYLEAAKASIQCPNGALQASDLLQLARSQVDYILGSNPKNMSYMVGYGTNYPKKPHHRGASIVSIKKDKTPVTCSG 431 (489)
T ss_pred HHHHHHHhhcccccccCCCCcCHHHHHHHHHHHHHHhcCCCCCCCceEeecCCCCCCccccccCCCCccccCCcccCCCC
Confidence 99999998877889999988999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccccCCCCCCCCccceeecCCCCCCCcccccCcccccccccCCCchHHHHHHHHh
Q 017562 169 GYATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNYEQTEPATYNNAPILGILARLN 226 (369)
Q Consensus 169 G~~~~~~~~~~np~vl~GAlVGGPd~~D~f~D~r~~y~~nEvaid~NA~~vg~lA~l~ 226 (369)
||+.|++++.||||+|+||||||||++|.|.|+|+||++|||||||||+|||+||+|+
T Consensus 432 g~~~~~~~~~pn~~vL~GAlVGGPd~~D~y~D~r~~y~~nEva~dyNA~~vgalA~l~ 489 (489)
T PLN00119 432 GFDAWYNNPAPNPNVLMGAIVGGPDDNDVYGDERSNFQQAEPATVTVAPFVGVLAAVA 489 (489)
T ss_pred CccccccCCCCCcceecceeecCCCCCCCcCccccccccCcceeecchHHHHHhhhcC
Confidence 9999999999999999999999999999999999999999999999999999999984
No 4
>PLN02420 endoglucanase
Probab=100.00 E-value=3.5e-66 Score=533.76 Aligned_cols=229 Identities=53% Similarity=1.004 Sum_probs=214.2
Q ss_pred CCCCCCCCceeecccchhHHHHHhhhhhccCCCCCchHHHHHHHHHHHHhhhhhcCC--CCCceeeCCCcceeccCCCcH
Q 017562 1 MGGTGWGMTEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYFMCSCLGK--GSRNVQKTPGGLIFRQRWNNM 78 (369)
Q Consensus 1 ~~~~~~~~~~fsWD~K~~gv~vLla~~~~~~~~~~~~~~~~~y~~~ae~~~c~~l~~--~~~~~~~TpgGl~~~~~Wgs~ 78 (369)
+||.+|.+.+|+||+|..|+++||++++.+++...+...+++|+++||.|+|+++++ ++..+.+||+||+|+++||++
T Consensus 280 ~~~~~~~~~~~~WD~k~~G~~~Lla~~~~~~~~~~~~~~l~~y~~~ad~~~~~~~~~~~~~~~~~~TpgGl~~~~~Wgs~ 359 (525)
T PLN02420 280 LGGLSWAMSEFSWDVKYAGVQLLASMLLKEEKHKQHSKVLQQYKSKADHYLCSILNKNINGTNVQRTPAGLLYVRQWNNM 359 (525)
T ss_pred cCCccccCcccCCcccHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHHhhccCCCCCCcccccCCeeEEeCCCCch
Confidence 367889888999999999999999999865544456788899999999999999887 345789999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCccccCCCCCChHHHHHHHHhcchhhhCCCCCCceeEEeeCCCCCCCcccccccccccc
Q 017562 79 QFVTSASFLATVYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIK 158 (369)
Q Consensus 79 ~y~an~Afl~~~ya~~l~~~~~~~~c~~~~~~~~~~~~~A~~QidYiLG~Np~~~SyvvG~G~~~P~~pHHR~ss~p~~~ 158 (369)
||++|+|||+++|++++..+.+.++|+++.+.+++|++||++|||||||+||+++|||||||+|+|+|||||+||||+++
T Consensus 360 ryaan~afla~vya~~l~~~~~~~~c~~~~~~~~~~~~fA~~QidYiLG~NP~~~SYvVGfG~n~P~~pHHR~As~p~~~ 439 (525)
T PLN02420 360 QYVSTASFLLTVYSDHLRKSNTDLECHEGTVTPDEMLGFAKSQIDYILGSNPMETSYLVGYGPKYPTRVHHRGASIASFK 439 (525)
T ss_pred HHHHHHHHHHHHHHHHhhhcccccccCCCCCCHHHHHHHHHHhhhhhccCCCCCCceEeccCCCCCCCccccccCCCccc
Confidence 99999999999999999888888999988889999999999999999999999999999999999999999999999988
Q ss_pred CCCCccccCCCccccccCCCCCCCCccceeecCCCCCCCcccccCcccccccccCCCchHHHHHHHHhhcC
Q 017562 159 VNPSFVSCRGGYATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNYEQTEPATYNNAPILGILARLNAGH 229 (369)
Q Consensus 159 ~~p~~~~C~~G~~~~~~~~~~np~vl~GAlVGGPd~~D~f~D~r~~y~~nEvaid~NA~~vg~lA~l~~~~ 229 (369)
+++..++|.+||++|++.+.||||+|+||||||||.+|.|.|+|+||++|||+|||||+|||+||+|....
T Consensus 440 ~~~~~~~c~~g~~~~~~~~~pn~~vL~GALVGGPd~~D~y~D~r~~y~~nE~~~~~nA~~vg~lA~L~~~~ 510 (525)
T PLN02420 440 EHKGFIGCTQGYDNWYGRSEPNPSVLVGALVGGPDCQDNFDDRRGNYVQTEACTYNTAPLVGVFARLIELE 510 (525)
T ss_pred cccccccCcccccccccCCCCCcccccCceecCCCCCCCcccccccccccccchhhhhHHHHHHHHHHHhc
Confidence 88899999999999999999999999999999999999999999999999999999999999999999653
No 5
>PLN02266 endoglucanase
Probab=100.00 E-value=3.4e-66 Score=532.26 Aligned_cols=219 Identities=47% Similarity=0.813 Sum_probs=204.0
Q ss_pred CceeecccchhHHHHHhhhhhccCCCCCchHHHHHHHHHHHHhhhhhcCC-CCCceeeCCCcceeccCCCcHHHHHHHHH
Q 017562 8 MTEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYFMCSCLGK-GSRNVQKTPGGLIFRQRWNNMQFVTSASF 86 (369)
Q Consensus 8 ~~~fsWD~K~~gv~vLla~~~~~~~~~~~~~~~~~y~~~ae~~~c~~l~~-~~~~~~~TpgGl~~~~~Wgs~~y~an~Af 86 (369)
...|+||+|.+|+++||+|++..+ ....+++|++.+|.|+|+++++ +...+++|||||+|+++||++||++|+||
T Consensus 290 ~~~~~WD~k~~ga~vLLa~~~~~~----~~~~~~~yk~~~d~~~~~~~~~~~~~~~~~TpGGL~~~~~wg~lrYa~~~af 365 (510)
T PLN02266 290 DNTFGWDNKHVGARILLSKAFLVQ----KVQSLHEYKGHADNFICSVIPGAPFSSTQYTPGGLLFKMSDSNMQYVTSTSF 365 (510)
T ss_pred CCccCcchhHHHHHHHHHHHHhhc----chHHHHHHHHHHHHHHHhccCCCCCCccccCCCeeEEeCCCCcHHHHHHHHH
Confidence 357999999999999999987432 2346789999999999999877 33568999999999999999999999999
Q ss_pred HHHHHHHHhhhcCCccccCCCCCChHHHHHHHHhcchhhhCCCCCCceeEEeeCCCCCCCccccccccccccCCCCcccc
Q 017562 87 LATVYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSC 166 (369)
Q Consensus 87 l~~~ya~~l~~~~~~~~c~~~~~~~~~~~~~A~~QidYiLG~Np~~~SyvvG~G~~~P~~pHHR~ss~p~~~~~p~~~~C 166 (369)
|+++|+|++.++++.+.|++...++++|++||++|||||||+||++||||||||.|+|++||||+||||+++.+|.+++|
T Consensus 366 la~vya~~l~~~~~~~~cg~~~~~~~~~~~fA~~QidYiLG~NP~~~SyvVG~G~~~P~~pHHR~as~p~~~~~~~~~~C 445 (510)
T PLN02266 366 LLLTYAKYLTSAKTVVNCGGTVVTPARLRSIAKKQVDYLLGDNPLKMSYMVGYGPRYPRRIHHRGSSLPSVAAHPAKIQC 445 (510)
T ss_pred HHHHHHHHHHhcCCceecCCCccCHHHHHHHHHhhhceeccCCCCCCceEEecCCCCCccccccCCCCCCcccCccccCC
Confidence 99999999988888899998888999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccccCCCCCCCCccceeecCCCCCCCcccccCcccccccccCCCchHHHHHHHHhhcCCC
Q 017562 167 RGGYATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNYEQTEPATYNNAPILGILARLNAGHGG 231 (369)
Q Consensus 167 ~~G~~~~~~~~~~np~vl~GAlVGGPd~~D~f~D~r~~y~~nEvaid~NA~~vg~lA~l~~~~~~ 231 (369)
.+||+ |++++.||||+|+||||||||.+|.|.|+|+||++|||||||||+|||+||+|...+|+
T Consensus 446 ~~g~~-~~~~~~~n~~vL~GAlVGGPd~~D~y~D~r~~y~~nEva~dyNA~~vgalA~l~~~yg~ 509 (510)
T PLN02266 446 SQGFS-IMNSQSPNPNVLVGAVVGGPDQHDRFPDERSDYEQSEPATYINAPLVGALAYLAHSYGQ 509 (510)
T ss_pred CCCcc-ccCCCCCCcceecceeecCCCCCCCCCccccccccCcceeecchHHHHHHHHHHHHhcC
Confidence 99995 99999999999999999999999999999999999999999999999999999977653
No 6
>PLN02175 endoglucanase
Probab=100.00 E-value=9.8e-66 Score=525.65 Aligned_cols=217 Identities=43% Similarity=0.803 Sum_probs=201.0
Q ss_pred CCceeecccchhHHHHHhhhhhccCCCCCchHHHHHHHHHHHHhhhhhcCC-CCCceeeCCCcceeccCCCcHHHHHHHH
Q 017562 7 GMTEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYFMCSCLGK-GSRNVQKTPGGLIFRQRWNNMQFVTSAS 85 (369)
Q Consensus 7 ~~~~fsWD~K~~gv~vLla~~~~~~~~~~~~~~~~~y~~~ae~~~c~~l~~-~~~~~~~TpgGl~~~~~Wgs~~y~an~A 85 (369)
...+|+||+|.+|++|||+|+.+.++. ..++.|++++|.|+|.++++ .+..+++|||||+|+++||++||++|+|
T Consensus 264 ~~~~~~Wd~k~~g~~vLla~~~~~~~~----~~~~~y~~~~~~~~~~~~~~~~~~~~~~TpgGL~~~~~wg~lrya~~~a 339 (484)
T PLN02175 264 QPDIFSWDNKYAGAYVLLSRRALLNKD----SNFEQYKQAAENFICKILPDSPSSSTQYTQGGLMYKLPQSNLQYVTSIT 339 (484)
T ss_pred CCCccCCcCHHHHHHHHHHHhhhcCCC----chHHHHHHHHHHHHHhccCCCCCccccccCCceEEECCCCcHHHHHHHH
Confidence 346799999999999999997654332 34678999999999999987 3457999999999999999999999999
Q ss_pred HHHHHHHHHhhhcCCccccCCCCCChHHHHHHHHhcchhhhCCCCCCceeEEeeCCCCCCCccccccccccccCCCCccc
Q 017562 86 FLATVYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVS 165 (369)
Q Consensus 86 fl~~~ya~~l~~~~~~~~c~~~~~~~~~~~~~A~~QidYiLG~Np~~~SyvvG~G~~~P~~pHHR~ss~p~~~~~p~~~~ 165 (369)
||+++|+|++.++++.++|++..+++++|++||++|||||||+||+++|||||||+|+|++||||+||||+....+..++
T Consensus 340 fla~~ya~~l~~~~~~~~cg~~~~~~~~~~~fA~~Q~~yiLG~np~~~syvvG~g~n~p~~pHHR~AS~p~~~~~~~~~~ 419 (484)
T PLN02175 340 FLLTTYAKYMKSTKHTFNCGNSVIVPNALISLSKRQVDYILGDNPIKMSYMVGFSSNFPKRIHHRASSLPSHALRSNSLG 419 (484)
T ss_pred HHHHHHHHHHhhcccccccCCCccCHHHHHHHHHHhhhhhccCCCCCCceEeecCCCCCCCccccccCCCcccccccccC
Confidence 99999999998888889999988999999999999999999999999999999999999999999999999888888899
Q ss_pred cCCCccccccCCCCCCCCccceeecCCCCCCCcccccCcccccccccCCCchHHHHHHHHhhc
Q 017562 166 CRGGYATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNYEQTEPATYNNAPILGILARLNAG 228 (369)
Q Consensus 166 C~~G~~~~~~~~~~np~vl~GAlVGGPd~~D~f~D~r~~y~~nEvaid~NA~~vg~lA~l~~~ 228 (369)
|.+||+ |++++.||||||+||||||||++|.|.|+|+||++|||||||||+|||+||+|...
T Consensus 420 C~~g~~-~~~~~~pn~~vL~GAlVGGPd~~D~y~D~r~dy~~nEva~dyNA~~vgalA~l~~~ 481 (484)
T PLN02175 420 CNGGFQ-SFYTQNPNPNILTGAIVGGPNQNDGYPDQRDDYSHAEPATYINAAFVGPLAYFAAG 481 (484)
T ss_pred CCCCcc-cccCCCCCcceecceeecCCCCCCCcCccccccccCcceeecchHHHHHHHHHhcC
Confidence 999995 77889999999999999999999999999999999999999999999999999865
No 7
>PLN02308 endoglucanase
Probab=100.00 E-value=5.7e-65 Score=522.18 Aligned_cols=217 Identities=48% Similarity=0.846 Sum_probs=201.1
Q ss_pred CCCceeecccchhHHHHHhhhhhccCCCCCchHHHHHHHHHHHHhhhhhcCC-CCCceeeCCCcceeccCCCcHHHHHHH
Q 017562 6 WGMTEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYFMCSCLGK-GSRNVQKTPGGLIFRQRWNNMQFVTSA 84 (369)
Q Consensus 6 ~~~~~fsWD~K~~gv~vLla~~~~~~~~~~~~~~~~~y~~~ae~~~c~~l~~-~~~~~~~TpgGl~~~~~Wgs~~y~an~ 84 (369)
+...+|+||||.+|+++||+|+.+.++ ...+++|++++|.|+|.++++ +...+++||+||+|++.||++||++|+
T Consensus 270 ~~~~~f~WD~k~~G~~~Lla~~~~~~~----~~~~~~~~~~ad~~l~~~~~~~~~~~~~~TpgGl~~~~~~snlrya~na 345 (492)
T PLN02308 270 DTINEFGWDNKHAGINVLISKEVLMGK----AEYFQSFKQNADGFICSLLPGISHPQVQYSPGGLLFKVGGSNMQHVTSL 345 (492)
T ss_pred CCCcccccccHHHHHHHHHHHHHhcCc----hhHHHHHHHHHHHHHHHhccCCCCCcceeCCCeeEEeCCCchHHHHHHH
Confidence 345689999999999999999754332 245788999999999999986 334689999999999999999999999
Q ss_pred HHHHHHHHHHhhhcCCccccCCCCCChHHHHHHHHhcchhhhCCCCCCceeEEeeCCCCCCCccccccccccccCCCCcc
Q 017562 85 SFLATVYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFV 164 (369)
Q Consensus 85 Afl~~~ya~~l~~~~~~~~c~~~~~~~~~~~~~A~~QidYiLG~Np~~~SyvvG~G~~~P~~pHHR~ss~p~~~~~p~~~ 164 (369)
|||+++|+|+++.+.+.+.|+...+.+++|++||++|||||||+||+++|||||||+|+|+|||||+||||+++.++..+
T Consensus 346 afLa~~ya~~l~~~~~~~~cg~~~~~~~~y~~fA~~QidYiLG~NP~~~SYVVGfG~n~P~~pHHR~as~p~~~~~~~~~ 425 (492)
T PLN02308 346 SFLLLAYSNYLSHANKVVPCGESTASPALLRQVAKRQVDYILGDNPLRMSYMVGYGSRFPQRIHHRGSSLPSVAAHPARI 425 (492)
T ss_pred HHHHHHHHHHHhhcCCccccCCCccCHHHHHHHHHhccceeccCCCCCCceEeccCCCCCCchhhcCCCCCCcccCcccc
Confidence 99999999999877778999988889999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCccccccCCCCCCCCccceeecCCCCCCCcccccCcccccccccCCCchHHHHHHHHhh
Q 017562 165 SCRGGYATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNYEQTEPATYNNAPILGILARLNA 227 (369)
Q Consensus 165 ~C~~G~~~~~~~~~~np~vl~GAlVGGPd~~D~f~D~r~~y~~nEvaid~NA~~vg~lA~l~~ 227 (369)
+|.+|++ |++++.||||+|+||||||||.+|+|.|+|+||++|||||||||+|||+||+|..
T Consensus 426 ~c~~~~~-~~~~~~pnp~vL~GAlVGGPd~~d~y~D~r~~y~~nEva~dyNA~~vg~la~l~~ 487 (492)
T PLN02308 426 GCKEGSR-YFLSPNPNPNLLVGAVVGGPNVTDAFPDSRPYFQQSEPTTYINAPLVGLLAYFSA 487 (492)
T ss_pred CCCCCcc-ccCCCCCCcceeeceeecCCCCCCCCCccccccccCceeeehhhHHHHHHHHHhc
Confidence 9999995 9999999999999999999999999999999999999999999999999999984
No 8
>PLN02345 endoglucanase
Probab=100.00 E-value=1.4e-64 Score=516.85 Aligned_cols=216 Identities=43% Similarity=0.782 Sum_probs=197.6
Q ss_pred CceeecccchhHHHHHhhhhhccCCC---CCchHHHHHHHHHHHHhhhhhcCCC-CCceeeCCCcceeccCCCcHHHHHH
Q 017562 8 MTEFGWDVKYPGVQTLVAKFLMQGKA---GHYAPVFERYQQKAEYFMCSCLGKG-SRNVQKTPGGLIFRQRWNNMQFVTS 83 (369)
Q Consensus 8 ~~~fsWD~K~~gv~vLla~~~~~~~~---~~~~~~~~~y~~~ae~~~c~~l~~~-~~~~~~TpgGl~~~~~Wgs~~y~an 83 (369)
..+|+||||.+|++|||+|++.+++. ..+...+++|++.+|.|||+++++. ...+.+|||||+|+++||++||++|
T Consensus 241 ~~~~~WD~k~~g~~~lla~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~TpgGl~~~~~wgslrya~~ 320 (469)
T PLN02345 241 PTWFSWDDKLAGTQVLLSRLTFFGPKGASNTVNSGLQMYKKTAEAVMCGLLPDSPTATTSRTDGGLIWVSEWNALQHAVN 320 (469)
T ss_pred CceecCcchHHHHHHHHHHHhhccCccccchhhHHHHHHHHHHHHHHHHhcCCCCCccccccCCeeEEeCCCchHHHHHH
Confidence 45799999999999999999864432 1345678999999999999999873 3468999999999999999999999
Q ss_pred HHHHHHHHHHHhhhcC-CccccCCCCCChHHHHHHHHhcchhhhCCCCCCceeEEeeCCCCCCCccccccccccccCCCC
Q 017562 84 ASFLATVYSDYLASAG-RDLKCSAGNVAPAELLGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPS 162 (369)
Q Consensus 84 ~Afl~~~ya~~l~~~~-~~~~c~~~~~~~~~~~~~A~~QidYiLG~Np~~~SyvvG~G~~~P~~pHHR~ss~p~~~~~p~ 162 (369)
+|||+++|+|++.++. ..+.|++..+++++|++||++|||||||+||++||||||||+|+|+|||||+||||+ +.
T Consensus 321 ~afla~vya~~l~~~~~~~~~c~~~~~~~~~~~~fA~~QidYiLG~NP~~~SYvVGfG~n~P~~pHHR~As~p~----~~ 396 (469)
T PLN02345 321 SAFLAVLYSDYMLSSGIAKLSCSGKSFKPSDLRKFAKSQADYILGKNPMKMSYLVGYGDKYPQYVHHRGASIPA----DA 396 (469)
T ss_pred HHHHHHHHHHHHHhcCCCccccCCCCCCHHHHHHHHHHHHHHHhcCCCCCcceEeecCCCCCCCcccccCCCCC----CC
Confidence 9999999999998764 679999888999999999999999999999999999999999999999999999986 35
Q ss_pred ccccCCCccccccCCCCCCCCccceeecCCCCCCCcccccCcccccccccCCCchHHHHHHHHhhc
Q 017562 163 FVSCRGGYATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNYEQTEPATYNNAPILGILARLNAG 228 (369)
Q Consensus 163 ~~~C~~G~~~~~~~~~~np~vl~GAlVGGPd~~D~f~D~r~~y~~nEvaid~NA~~vg~lA~l~~~ 228 (369)
.++|.+||. |++++.||||||+||||||||++|.|.|+|+||++|||++|+||+|||+||+|...
T Consensus 397 ~~~c~~g~~-~~~~~~pn~~vL~GAlVGGPd~~D~y~D~r~~y~~nEva~y~nA~~vg~la~l~~~ 461 (469)
T PLN02345 397 KTGCKDGFK-WLHSSEPNPNVATGALVGGPFQNDTFVDSRDNSMQNEPTTYNSALLVGLLSSLVTT 461 (469)
T ss_pred CcCCCCCcc-cccCCCCCCceeccceecCCCccCCccccccccccccceeehhhHHHHHHHHHhcC
Confidence 689999995 99999999999999999999999999999999999999999999999999999953
No 9
>PLN02613 endoglucanase
Probab=100.00 E-value=6.4e-64 Score=514.63 Aligned_cols=219 Identities=41% Similarity=0.806 Sum_probs=203.6
Q ss_pred CceeecccchhHHHHHhhhhhccCCCCCchHHHHHHHHHHHHhhhhhcCCC-CCceeeCCCcceeccCCCcHHHHHHHHH
Q 017562 8 MTEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYFMCSCLGKG-SRNVQKTPGGLIFRQRWNNMQFVTSASF 86 (369)
Q Consensus 8 ~~~fsWD~K~~gv~vLla~~~~~~~~~~~~~~~~~y~~~ae~~~c~~l~~~-~~~~~~TpgGl~~~~~Wgs~~y~an~Af 86 (369)
..+|+||||.+|+++||++++++++ ..++.|++++|.|+|.++++. ...+.+||+||+|+++||++||++|+||
T Consensus 264 ~~~~~Wd~~~~G~~vLla~~~~~~~-----~~~~~yk~~~e~~~~~~~~~~~~~~~~~TPgGL~~~~~wg~lry~~~~af 338 (498)
T PLN02613 264 VNEFSWDNKFAGAQALLASEFYGGA-----NDLAKFKTDVESFVCALMPGSSSVQIKTTPGGLLFTRDSSNLQYVTTATT 338 (498)
T ss_pred CCccCccchHHHHHHHHHHHHhcCc-----chHHHHHHHHHHHHHHhccCCCCcccccCCCceEEeCCCCcHHHHHHHHH
Confidence 3579999999999999999865322 346889999999999999873 4579999999999999999999999999
Q ss_pred HHHHHHHHhhhcC-CccccCCCCCChHHHHHHHHhcchhhhCCCCCCceeEEeeCCCCCCCccccccccccccCCCCccc
Q 017562 87 LATVYSDYLASAG-RDLKCSAGNVAPAELLGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVS 165 (369)
Q Consensus 87 l~~~ya~~l~~~~-~~~~c~~~~~~~~~~~~~A~~QidYiLG~Np~~~SyvvG~G~~~P~~pHHR~ss~p~~~~~p~~~~ 165 (369)
|+++|+|++++++ +.++|+...+++++|++||++|||||||+||+++|||||||.|+|++||||+||||+++.+|.+++
T Consensus 339 la~~ya~~l~~~~~~~~~c~~~~~~~~~~~~~a~~Qi~yiLG~Np~~~syvvG~G~n~P~~pHHR~as~p~~~~~~~~~~ 418 (498)
T PLN02613 339 VLFIYSKTLTKAGVGGIQCGSAQFSASQIRNFAKSQVDYILGNNPMKMSYMVGFGTKYPTQIHHRGSSIPSIQVLPEKVD 418 (498)
T ss_pred HHHHHHHHHhhcccCccccCCcccCHHHHHHHHHHhHHHhcCCCCCCCcceeccCCCCCCcccccccCCCccccCccccC
Confidence 9999999998764 579999888889999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCCccceeecCCCCCCCcccccCcccccccccCCCchHHHHHHHHhhcCCC
Q 017562 166 CRGGYATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNYEQTEPATYNNAPILGILARLNAGHGG 231 (369)
Q Consensus 166 C~~G~~~~~~~~~~np~vl~GAlVGGPd~~D~f~D~r~~y~~nEvaid~NA~~vg~lA~l~~~~~~ 231 (369)
|.+||+.|++++.||||+|+||||||||++|.|.|+|+||++|||||||||+|||+||+|......
T Consensus 419 c~~g~~~~~~~~~Pnp~~l~GAlVGGPd~~D~y~D~r~~y~~nEva~dyNA~~vgalA~l~~~~~~ 484 (498)
T PLN02613 419 CNGGFSSYYNSDTPNPNVHVGAIVGGPDSNDQYSDKRSDYSHAEPTTYINAAFVGSVAALIKQVSR 484 (498)
T ss_pred CCCCccccccCCCCCCceeeeeeecCCCcCCCccccccccccccceeecccHHHHHHHHHHHhhcc
Confidence 999999999999999999999999999999999999999999999999999999999999977554
No 10
>PLN02909 Endoglucanase
Probab=100.00 E-value=1.5e-63 Score=510.33 Aligned_cols=213 Identities=43% Similarity=0.765 Sum_probs=197.3
Q ss_pred ceeecccchhHHHHHhhhhhccCCCCCchHHHHHHHHHHHHhhhhhcCC-CCCceeeCCCcceeccCCCcHHHHHHHHHH
Q 017562 9 TEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYFMCSCLGK-GSRNVQKTPGGLIFRQRWNNMQFVTSASFL 87 (369)
Q Consensus 9 ~~fsWD~K~~gv~vLla~~~~~~~~~~~~~~~~~y~~~ae~~~c~~l~~-~~~~~~~TpgGl~~~~~Wgs~~y~an~Afl 87 (369)
.+|+||+|.+|+++||+++....+ ..+++|++.||.|+|.++++ +...+.+|||||+|++.|||+||+++++||
T Consensus 272 ~~~sWD~k~~g~~~lLa~~~~~~~-----~~~~~y~~~ad~~~~~~~~~~~~~~~~~TpgGl~~~~~wgn~rya~~aafL 346 (486)
T PLN02909 272 AEFSWDLKYAGAQVLLSKLNFEGE-----KGLQSYKQQADSFVCSVLPGSPFHQVFITPGGMIHLRDGANSQYVTSTAFL 346 (486)
T ss_pred CccCCcccccHHHHHHHHhhcccc-----hhHHHHHHHHHHHHHHhccCCCCcccccCCCceeEecCCChHHHHHHHHHH
Confidence 469999999999999999864221 34689999999999998876 345689999999999999999999999999
Q ss_pred HHHHHHHhhhcCCccccCCCCCChHHHHHHHHhcchhhhCCCCCCceeEEeeCCCCCCCccccccccccccCCCCccccC
Q 017562 88 ATVYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCR 167 (369)
Q Consensus 88 ~~~ya~~l~~~~~~~~c~~~~~~~~~~~~~A~~QidYiLG~Np~~~SyvvG~G~~~P~~pHHR~ss~p~~~~~p~~~~C~ 167 (369)
+++|+|++.+..+.++|+.....+++|++||++|||||||+||+++|||||||+|+|+|||||+||||+.+. +.+|+|.
T Consensus 347 a~~ya~~l~~~~~~~~c~~~~~~~~~y~~fA~~QidYiLG~NP~~~SYVVGfG~n~P~~pHHR~as~~~~~~-~~~~~c~ 425 (486)
T PLN02909 347 FSVYSDILRRHNQKVMCGNQQFDSTRLMAFAKQQIDYLLGANPQGRSYMVGFGPNPPKQPHHRGASVPVLPA-NTPVNCG 425 (486)
T ss_pred HHHHHHHHhhcccccccCCCCCCHHHHHHHHHHHHHHhcCCCCCCCceEeccCCCCcCCccccccCCCCccc-CcccCCC
Confidence 999999998777889999888899999999999999999999999999999999999999999999998654 6789999
Q ss_pred CCccccccCCCCCCCCccceeecCCCCCCCcccccCcccccccccCCCchHHHHHHHHhh
Q 017562 168 GGYATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNYEQTEPATYNNAPILGILARLNA 227 (369)
Q Consensus 168 ~G~~~~~~~~~~np~vl~GAlVGGPd~~D~f~D~r~~y~~nEvaid~NA~~vg~lA~l~~ 227 (369)
+||++|++++.||||+|+||||||||.+|.|.|+|.||++|||||||||+|||+||+|..
T Consensus 426 ~g~~~~~~~~~pn~~vL~GAlVGGPd~~D~y~D~r~~y~~nE~a~dyNA~~vg~lA~l~~ 485 (486)
T PLN02909 426 LSFVEWFNKDRPNPNELTGAIVGGPDRQDNFVDKRWNSSYTEPCTYINSLAVGVLAKLAA 485 (486)
T ss_pred CcccccccCCCCCcceeccceecCCCCCCCccccccccccCcceeecchHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999999999999975
No 11
>PLN03009 cellulase
Probab=100.00 E-value=1.5e-59 Score=483.37 Aligned_cols=217 Identities=45% Similarity=0.844 Sum_probs=200.2
Q ss_pred CceeecccchhHHHHHhhhhhccCCCCCchHHHHHHHHHHHHhhhhhcCC-CCCceeeCCCcceeccCCCcHHHHHHHHH
Q 017562 8 MTEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYFMCSCLGK-GSRNVQKTPGGLIFRQRWNNMQFVTSASF 86 (369)
Q Consensus 8 ~~~fsWD~K~~gv~vLla~~~~~~~~~~~~~~~~~y~~~ae~~~c~~l~~-~~~~~~~TpgGl~~~~~Wgs~~y~an~Af 86 (369)
..+|+||+|.+|+++||+++...+. ...+++|++.||.|+|.++++ .+..+.+||+||+|++.|+++||++|+||
T Consensus 275 ~~~~~Wd~~~~g~~~lla~~~~~~~----~~~~~~~~~~ad~~~~~~~~~~~~~~v~~t~~g~~~~~~~sn~~~a~~aaf 350 (495)
T PLN03009 275 INEFGWDNKHAGLNVLVSKEVLEGN----MYSLQSYKASADSFMCTLIPESSSSHVEYTPGGLIYKPGGSNLQHATTISF 350 (495)
T ss_pred CCCCCCccHHHHHHHHHHHhhhccc----hhHHHHHHHHHHHHHHHhcccCCCCccccCCCCeEEeCCCChHHHHHHHHH
Confidence 4579999999999999998764321 123688999999999998876 44579999999999999999999999999
Q ss_pred HHHHHHHHhhhcCCccccCCCCCChHHHHHHHHhcchhhhCCCCCCceeEEeeCCCCCCCccccccccccccCCCCcccc
Q 017562 87 LATVYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSC 166 (369)
Q Consensus 87 l~~~ya~~l~~~~~~~~c~~~~~~~~~~~~~A~~QidYiLG~Np~~~SyvvG~G~~~P~~pHHR~ss~p~~~~~p~~~~C 166 (369)
|+++|+++++.....++|+....+..+|++||++|||||||+||+++|||||||+|+|+|||||+||+|.+..+|..+.|
T Consensus 351 l~l~yA~~l~~~~~~~~~~~~~~~~~~y~~~A~~Q~dYiLG~Np~~~SYVvGyG~~~p~~pHHR~as~~~~~~~~~~~~c 430 (495)
T PLN03009 351 LLLVYANYLSRSSQSVNCGNLTIGPDSLRQQAKRQVDYILGDNPMGLSYMVGYSERYPQRIHHRGSSLPSIKDHPEAIAC 430 (495)
T ss_pred HHHHHHHHhhhcccccccccCcCCHHHHHHHHHHHHHHhcCCCCCCCceEecCCCCCcCchhhccccCCccccccccccC
Confidence 99999999987777899999888999999999999999999999999999999999999999999999999888999999
Q ss_pred CCCccccccCCCCCCCCccceeecCCCCCCCcccccCcccccccccCCCchHHHHHHHHhhcC
Q 017562 167 RGGYATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNYEQTEPATYNNAPILGILARLNAGH 229 (369)
Q Consensus 167 ~~G~~~~~~~~~~np~vl~GAlVGGPd~~D~f~D~r~~y~~nEvaid~NA~~vg~lA~l~~~~ 229 (369)
.+|+. |++.+.||||+|+||||||||.+|+|.|+|++|++|||||||||+||++||+|...+
T Consensus 431 ~~g~~-~~~~~~p~p~vl~GaLVGGP~~~d~y~D~r~~y~~NEvaidyNA~lv~~lA~l~~~~ 492 (495)
T PLN03009 431 KEGSV-YFNSSNPNPNVLVGAVVGGPGEDDSYEDDRDDFRKSEPTTYINAPFVGVLAYFAANP 492 (495)
T ss_pred ccCcc-ccCCCCCCCCcccceEeeCCCCCCCCCcccccccccchhhhhhHHHHHHHHHHhcCC
Confidence 99996 999999999999999999999999999999999999999999999999999998644
No 12
>PF00759 Glyco_hydro_9: Glycosyl hydrolase family 9; InterPro: IPR001701 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 9 GH9 from CAZY comprises enzymes with several known activities; endoglucanase (3.2.1.4 from EC); cellobiohydrolase (3.2.1.91 from EC). These enzymes were formerly known as cellulase family E. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1RQ5_A 1CLC_A 3H7L_B 1K72_B 1G87_B 1GA2_A 1KFG_A 1UT9_A 2YIK_A 3RX5_A ....
Probab=100.00 E-value=1.6e-45 Score=374.05 Aligned_cols=188 Identities=40% Similarity=0.696 Sum_probs=150.5
Q ss_pred eeecccchhHHHHHhhhhhccCCCCCchHHHHHHHHHHHHhhhhhcCCCCCceeeCCCcceeccCCCcHHHHHHHHHHHH
Q 017562 10 EFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYFMCSCLGKGSRNVQKTPGGLIFRQRWNNMQFVTSASFLAT 89 (369)
Q Consensus 10 ~fsWD~K~~gv~vLla~~~~~~~~~~~~~~~~~y~~~ae~~~c~~l~~~~~~~~~TpgGl~~~~~Wgs~~y~an~Afl~~ 89 (369)
.|+||+|..+++++|+++...... .....++|++.++.++|.+.......+.+||+||+|...||+++|++|++||++
T Consensus 257 ~~~W~~~~~~~~~~la~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~WGs~~~~~~~a~l~~ 334 (444)
T PF00759_consen 257 SFSWDNKAAGAQLLLAKLTNDDPS--RDAAREQYKSAADKFLNKWLNDGYGSVPYTPGGLAWIYEWGSNRYAANAAFLAL 334 (444)
T ss_dssp SSCTTBSHHHHHHHHHHHHCCSCH--HHHHHHHHHHHHHHHHHHHHHSTTTBSEBCTTSSBESESTTHHHHHHHHHHHHH
T ss_pred ccchhhhhhhhhHHHHhcccchhh--hHHHHHHHHHHHHHHHHHHhhccCCCcccCccccccccCCCccHHHHHHHHHHH
Confidence 699999999999999998642221 222468899999999998876544568999999999999999999999999999
Q ss_pred HHHHHhhhcCCccccCCCCCChHHHHHHHHhcchhhhCCCCCCceeEEeeCCCCCCCccccccccccccCCCCccccCCC
Q 017562 90 VYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCRGG 169 (369)
Q Consensus 90 ~ya~~l~~~~~~~~c~~~~~~~~~~~~~A~~QidYiLG~Np~~~SyvvG~G~~~P~~pHHR~ss~p~~~~~p~~~~C~~G 169 (369)
+|+++. ..+..+|++||++|||||||+||+++|||||||.|+|++||||.+|. .| +
T Consensus 335 ~~~~~~------------~~~~~~y~~~a~~qldyiLG~Np~~~SyV~G~G~~~p~~pHHr~~s~----------~~--~ 390 (444)
T PF00759_consen 335 AYAKYD------------LTGDQEYRDFAQSQLDYILGRNPFGQSYVTGYGENSPQHPHHRASSA----------HC--S 390 (444)
T ss_dssp HHHHTC------------HCHHHHHHHHHHHHHHHHHTTSTT--BSBTTSSSSBBSS-B-HHCHH----------HT--C
T ss_pred HHHhcc------------cCChHHHHHHHHHHhhhhcCcCCCCceeeecCCCCCCCCCcCchhhc----------cc--c
Confidence 999651 12578999999999999999999999999999999999999999871 11 2
Q ss_pred ccccccCCCCCCCCccceeecCCCCCCCcccccCcccccccccCCCchHHHHHH
Q 017562 170 YATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNYEQTEPATYNNAPILGILA 223 (369)
Q Consensus 170 ~~~~~~~~~~np~vl~GAlVGGPd~~D~f~D~r~~y~~nEvaid~NA~~vg~lA 223 (369)
+++++..+.|||++|+||||||||..|+|.|+|.+|++|||||||||+||++||
T Consensus 391 ~~~~~~~~~pn~~~l~GalvGGP~~~~~y~D~~~~~~~nEvaid~NA~l~~~lA 444 (444)
T PF00759_consen 391 WDDGINSPPPNPHVLYGALVGGPNSADSYVDDRSSYSTNEVAIDYNAPLVGALA 444 (444)
T ss_dssp CSSTSTSSSS-SS--TT-BBS-SSTTS----STT-TTTHBBBHHHHHHHHHHHH
T ss_pred ccccCCCCCCCccCccccccCCCCccCCccCCCcccccchHHHHHHHHHHHHhC
Confidence 345677889999999999999999999999999999999999999999999997
No 13
>PF09478 CBM49: Carbohydrate binding domain CBM49; InterPro: IPR019028 A carbohydrate-binding module (CBM) is defined as a contiguous amino acid sequence within a carbohydrate-active enzyme with a discreet fold having carbohydrate-binding activity. A few exceptions are CBMs in cellulosomal scaffolding proteins and rare instances of independent putative CBMs. The requirement of CBMs existing as modules within larger enzymes sets this class of carbohydrate-binding protein apart from other non-catalytic sugar binding proteins such as lectins and sugar transport proteins. CBMs were previously classified as cellulose-binding domains (CBDs) based on the initial discovery of several modules that bound cellulose [, ]. However, additional modules in carbohydrate-active enzymes are continually being found that bind carbohydrates other than cellulose yet otherwise meet the CBM criteria, hence the need to reclassify these polypeptides using more inclusive terminology. Previous classification of cellulose-binding domains were based on amino acid similarity. Groupings of CBDs were called "Types" and numbered with roman numerals (e.g. Type I or Type II CBDs). In keeping with the glycoside hydrolase classification, these groupings are now called families and numbered with Arabic numerals. Families 1 to 13 are the same as Types I to XIII. For a detailed review on the structure and binding modes of CBMs see []. This domain is found at the C-terminal of cellulases and in vitro binding studies have shown it to binds to crystalline cellulose []. ; GO: 0030246 carbohydrate binding, 0005576 extracellular region
Probab=99.88 E-value=1.8e-22 Score=161.01 Aligned_cols=79 Identities=43% Similarity=0.865 Sum_probs=74.8
Q ss_pred eEEEEeeecccccCCeEEEEEEEEEEeCCCcceeeeEEEeccCCCCccccEE-cCCeeecCCCcccCCCCCeEEEEEEeC
Q 017562 277 IAIQQKLTTSWISNGKRYYRYSTIVTNKSAKTLKNLKLSISKLYGPLWGLTN-LGNAYGFPSWLNNLAAGKSLEFVYIHT 355 (369)
Q Consensus 277 v~i~q~v~~sW~~gg~~y~q~~VtI~N~g~~~I~~~~i~~~~l~~~iWnv~~-~~n~~tLPs~~~~I~~G~s~~FGYI~~ 355 (369)
|+|+|+++++|.++++.|+||+|+|+|+|.++|+++.|.++++.++||||++ .++.|+||+|+.+|+||++|+||||+.
T Consensus 1 i~i~q~~~~sW~~~g~~y~qy~v~I~N~~~~~I~~~~i~~~~l~~~iW~l~~~~~~~y~lPs~~~~i~pg~s~~FGYI~~ 80 (80)
T PF09478_consen 1 ITITQTLVNSWTENGQTYTQYDVTITNNGSKPIKSLKISIDNLYGSIWGLDKVSGNTYTLPSYQPTIKPGQSFTFGYISQ 80 (80)
T ss_pred CEEEEEEEeEEEeCCEEEEEEEEEEEECCCCeEEEEEEEECccchhheeEEeccCCEEECCccccccCCCCEEEEEEEeC
Confidence 6899999999999999999999999999999999999999977789999999 557899999999999999999999973
No 14
>PF00553 CBM_2: Cellulose binding domain; InterPro: IPR001919 The microbial degradation of cellulose and xylans requires several types of enzyme such as endoglucanases (3.2.1.4 from EC), cellobiohydrolases (3.2.1.91 from EC) (exoglucanases), or xylanases (3.2.1.8 from EC) []. Structurally, cellulases and xylanases generally consist of a catalytic domain joined to a cellulose-binding domain (CBD) by a short linker sequence rich in proline and/or hydroxy-amino acids. The CBD domain is found either at the N-terminal or at the C-terminal extremity of these enzymes. As it is shown in the following schematic representation, there are two conserved cysteines in this CBD domain - one at each extremity of the domain - which have been shown [] to be involved in a disulphide bond. There are also four conserved tryptophan, two are involved in cellulose binding. The CBD of a number of bacterial cellulases has been shown to consist of about 105 amino acid residues [, ]. +-------------------------------------------------+ | | xCxxxxWxxxxxNxxxWxxxxxxxWxxxxxxxxWNxxxxxGxxxxxxxxxxCx 'C': conserved cysteine involved in a disulphide bond. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process; PDB: 2CZN_A 2CWR_A 1HEH_C 1HEJ_C 3NDZ_E 3NDY_E 2XBD_A 1E5C_A 1XBD_A 1E5B_A ....
Probab=98.97 E-value=8.9e-10 Score=91.39 Aligned_cols=77 Identities=22% Similarity=0.417 Sum_probs=65.3
Q ss_pred eEEEEeeecccccCCeEEEEEEEEEEeCCCcceeeeEEEeccC----CCCccccEE--cCCe--eecCCCcccCCCCCeE
Q 017562 277 IAIQQKLTTSWISNGKRYYRYSTIVTNKSAKTLKNLKLSISKL----YGPLWGLTN--LGNA--YGFPSWLNNLAAGKSL 348 (369)
Q Consensus 277 v~i~q~v~~sW~~gg~~y~q~~VtI~N~g~~~I~~~~i~~~~l----~~~iWnv~~--~~n~--~tLPs~~~~I~~G~s~ 348 (369)
|+++.+++++|..| ++.+|+|+|++..+|++|+|.++.. +.++||.+. .++. ++.++|+..|+||++.
T Consensus 1 ctv~~~v~~~W~~G----f~~~v~v~N~~~~~i~~W~v~~~~~~~~~i~~~Wna~~s~~g~~~~v~~~~wn~~i~~G~s~ 76 (101)
T PF00553_consen 1 CTVTYTVTNSWGGG----FQGEVTVTNNGSSPINGWTVTFTFPSGQTITSSWNATVSQSGNTVTVTNPSWNGTIAPGGSV 76 (101)
T ss_dssp EEEEEEEEEESSSE----EEEEEEEEESSSSTEESEEEEEEESTTEEEEEEESCEEEEETTEEEEEESSTCSEEEESEEE
T ss_pred CEEEEEEecccCCC----eEEEEEEEECCCCccCCEEEEEEeCCCCEEeeeeccEEEecCCEEEEEcCCcCcccCCCCeE
Confidence 56788889999887 9999999999999999999988831 467999865 4454 5579999999999999
Q ss_pred EEEEEeCCC
Q 017562 349 EFVYIHTAN 357 (369)
Q Consensus 349 ~FGYI~~g~ 357 (369)
+|||+..+.
T Consensus 77 ~~Gf~~~~~ 85 (101)
T PF00553_consen 77 TFGFQASGS 85 (101)
T ss_dssp EEEEEEEES
T ss_pred EEEEEEeCC
Confidence 999997764
No 15
>smart00637 CBD_II CBD_II domain.
Probab=98.52 E-value=4.9e-07 Score=73.40 Aligned_cols=68 Identities=22% Similarity=0.397 Sum_probs=56.4
Q ss_pred cccccCCeEEEEEEEEEEeCCCcceeeeEEEec--c--CCCCccccEE--cCCeee--cCCCcccCCCCCeEEEEEEe-C
Q 017562 285 TSWISNGKRYYRYSTIVTNKSAKTLKNLKLSIS--K--LYGPLWGLTN--LGNAYG--FPSWLNNLAAGKSLEFVYIH-T 355 (369)
Q Consensus 285 ~sW~~gg~~y~q~~VtI~N~g~~~I~~~~i~~~--~--l~~~iWnv~~--~~n~~t--LPs~~~~I~~G~s~~FGYI~-~ 355 (369)
++|..+ ++.+|+|+|++..+|.+|.|.++ . .+.++|+.+. .++.|+ -++|+..|+||++.+|||+. .
T Consensus 2 ~~W~~G----~~~~v~vtN~~~~~~~~W~v~~~~~~~~~i~~~Wn~~~~~~g~~~~~~~~~wn~~i~~G~s~~~gf~~~~ 77 (92)
T smart00637 2 SDWGSG----FTANVTVTNTGSSAINGWTVTFDLPGGQTVTNSWNATVSQSGGHVTATNASWNGTIAPGGSVSFGFQGKT 77 (92)
T ss_pred CcCCCC----EEEEEEEEeCCCCcccCeEEEEEcCCCcEEeeeEEEEEEecCCEEEEecCccccccCCCCEEEEEEEecC
Confidence 679777 89999999999999999998776 2 2567999975 334444 55999999999999999999 6
Q ss_pred C
Q 017562 356 A 356 (369)
Q Consensus 356 g 356 (369)
|
T Consensus 78 G 78 (92)
T smart00637 78 G 78 (92)
T ss_pred C
Confidence 5
No 16
>COG5297 CelA Cellobiohydrolase A (1,4-beta-cellobiosidase A) [Carbohydrate transport and metabolism]
Probab=96.78 E-value=0.0051 Score=61.89 Aligned_cols=75 Identities=20% Similarity=0.321 Sum_probs=58.3
Q ss_pred CceEEEEeeecccccCCeEEEEEEEEEEeCCCcceeeeEEEec--cCCCCccccE--EcCCeee--cCCCcccCCCCCeE
Q 017562 275 GAIAIQQKLTTSWISNGKRYYRYSTIVTNKSAKTLKNLKLSIS--KLYGPLWGLT--NLGNAYG--FPSWLNNLAAGKSL 348 (369)
Q Consensus 275 ~~v~i~q~v~~sW~~gg~~y~q~~VtI~N~g~~~I~~~~i~~~--~l~~~iWnv~--~~~n~~t--LPs~~~~I~~G~s~ 348 (369)
..|+++-++.+.|..| +--+|.|+|+++++ +.|...+. ..++.+|+.+ ++++.++ =-.|+.+|+|++..
T Consensus 462 ~ni~~~i~~~~~w~~g----~cerv~vtnt~ss~-s~w~~t~~~kg~iq~lw~a~ws~~gd~l~asg~d~nktl~png~~ 536 (544)
T COG5297 462 KNITSSITVDSDWHTG----YCERVKVTNTGSSR-SSWTVTIPLKGTIQTLWSATWSLSGDKLIASGLDWNKTLEPNGTT 536 (544)
T ss_pred cCceeEEEeccccccc----ceeEEEeeccCCCC-cceEEEEeeccchhhhhhccccccCCeeeeeccccccccCCCCcc
Confidence 4688888999999988 56789999999876 56666555 3467788875 3555543 34899999999999
Q ss_pred EEEEEe
Q 017562 349 EFVYIH 354 (369)
Q Consensus 349 ~FGYI~ 354 (369)
+|||..
T Consensus 537 efgfc~ 542 (544)
T COG5297 537 EFGFCA 542 (544)
T ss_pred eeeccc
Confidence 999974
No 17
>PF06483 ChiC: Chitinase C; InterPro: IPR009470 This ~170 aa region is found at the C-terminal to the catalytic domain (IPR001223 from INTERPRO) found in members of glycoside hydrolase family 18.
Probab=96.69 E-value=0.0075 Score=55.08 Aligned_cols=87 Identities=21% Similarity=0.361 Sum_probs=61.0
Q ss_pred ceEEEEeeecccccCCeEE-EEEEEEEEeCCCcce-eeeEEEecc-------C-CCCccccEE--cC-C-----------
Q 017562 276 AIAIQQKLTTSWISNGKRY-YRYSTIVTNKSAKTL-KNLKLSISK-------L-YGPLWGLTN--LG-N----------- 331 (369)
Q Consensus 276 ~v~i~q~v~~sW~~gg~~y-~q~~VtI~N~g~~~I-~~~~i~~~~-------l-~~~iWnv~~--~~-n----------- 331 (369)
.|.|.-. ...|..|..+| .+-+++|+|++.++| -+.+|.+|- . .++=|++.. .+ +
T Consensus 35 ~ldv~v~-~~gf~~GD~NYPI~Pkl~iTNns~~~iPGGt~~~FD~ptSa~~~~kdqSG~g~~vi~sght~~g~NiGGL~g 113 (180)
T PF06483_consen 35 ALDVSVS-FTGFKLGDSNYPINPKLTITNNSGQTIPGGTEFEFDYPTSAPDNAKDQSGFGLKVISSGHTAAGNNIGGLKG 113 (180)
T ss_pred eEEEEEE-eCCcccCCCCCCcCCcEEEEcCCCcccCCccEEEEccccCCccccccccCCcEEEEecCCcccCCcccccCC
Confidence 4555533 46777665555 378999999999999 478888882 1 235666632 21 1
Q ss_pred -----eeecCCCcccCCCCCeEEEEEEeCCC---CceEEEE
Q 017562 332 -----AYGFPSWLNNLAAGKSLEFVYIHTAN---AADVSVS 364 (369)
Q Consensus 332 -----~~tLPs~~~~I~~G~s~~FGYI~~g~---~a~l~V~ 364 (369)
.++||+|+ +|+||+++++-++--=+ ++|++|.
T Consensus 114 dfHrvs~tlp~wq-slapG~s~~~~~~YyLPiSgPsN~tv~ 153 (180)
T PF06483_consen 114 DFHRVSFTLPAWQ-SLAPGASVELDMVYYLPISGPSNFTVN 153 (180)
T ss_pred ceEEEEEECCCcc-ccCCCCEEEEeEEEEeccCCCceEEEE
Confidence 18899997 79999999998873322 8888774
No 18
>PF09624 DUF2393: Protein of unknown function (DUF2393); InterPro: IPR013417 The function of this protein is unknown. It is always found as part of a two-gene operon with IPR013416 from INTERPRO, a protein that appears to span the membrane seven times. It has so far been found in the bacteria Anabaena sp. (strain PCC 7120), Agrobacterium tumefaciens, Rhizobium meliloti, and Gloeobacter violaceus.
Probab=87.34 E-value=4.2 Score=35.60 Aligned_cols=71 Identities=23% Similarity=0.276 Sum_probs=48.1
Q ss_pred EEEEEEEEeCCCcceeeeEEEeccCCCCccccEE--cCCeeecCCCccc-------CCCCCeEEEEEEeCCC----CceE
Q 017562 295 YRYSTIVTNKSAKTLKNLKLSISKLYGPLWGLTN--LGNAYGFPSWLNN-------LAAGKSLEFVYIHTAN----AADV 361 (369)
Q Consensus 295 ~q~~VtI~N~g~~~I~~~~i~~~~l~~~iWnv~~--~~n~~tLPs~~~~-------I~~G~s~~FGYI~~g~----~a~l 361 (369)
+-++++|+|.|+++|++.+|..+-. ..-+.... ..-.+.+-.+... |+||++-.|-.|...+ ..++
T Consensus 64 ~~v~g~V~N~g~~~i~~c~i~~~l~-~~~~~~~n~~~~~~~~~~~f~~~~~~i~~~L~~~e~~~f~~~~~~~p~~~~~~~ 142 (149)
T PF09624_consen 64 FYVDGTVTNTGKFTIKKCKITVKLY-NDKQVSGNKFKEIFYQQIPFVKKSIPIADNLKPGESKEFRFIFPYPPYFGNYNI 142 (149)
T ss_pred EEEEEEEEECCCCEeeEEEEEEEEE-eCCCccCchhhhhhccccchhccceeHHhhcCcccceeEEEEecCCccCCCceE
Confidence 6688999999999999999988721 11122111 1112444445444 9999999999998764 5567
Q ss_pred EEEeE
Q 017562 362 SVSAY 366 (369)
Q Consensus 362 ~V~~~ 366 (369)
.++.+
T Consensus 143 ~~~~~ 147 (149)
T PF09624_consen 143 RVKSY 147 (149)
T ss_pred EEEEE
Confidence 77654
No 19
>PF10633 NPCBM_assoc: NPCBM-associated, NEW3 domain of alpha-galactosidase; InterPro: IPR018905 This domain has been named NEW3, but its function is not known. It is found on proteins which are bacterial galactosidases [].; PDB: 1EUT_A 2BZD_A 1WCQ_C 2BER_A 1W8O_A 1EUU_A 1W8N_A.
Probab=76.01 E-value=6.2 Score=30.61 Aligned_cols=54 Identities=26% Similarity=0.388 Sum_probs=32.9
Q ss_pred EEEEEEEEeCCCcceeeeEEEeccCCCCccccEEcCCeeecCCCcccCCCCCeEEEEEEeCC
Q 017562 295 YRYSTIVTNKSAKTLKNLKLSISKLYGPLWGLTNLGNAYGFPSWLNNLAAGKSLEFVYIHTA 356 (369)
Q Consensus 295 ~q~~VtI~N~g~~~I~~~~i~~~~l~~~iWnv~~~~n~~tLPs~~~~I~~G~s~~FGYI~~g 356 (369)
..+.++|+|.|..++.++.+.++- =.=|.+... .-.++ .|+||++.++-|-.+-
T Consensus 7 ~~~~~tv~N~g~~~~~~v~~~l~~--P~GW~~~~~--~~~~~----~l~pG~s~~~~~~V~v 60 (78)
T PF10633_consen 7 VTVTLTVTNTGTAPLTNVSLSLSL--PEGWTVSAS--PASVP----SLPPGESVTVTFTVTV 60 (78)
T ss_dssp EEEEEEEE--SSS-BSS-EEEEE----TTSE---E--EEEE------B-TTSEEEEEEEEEE
T ss_pred EEEEEEEEECCCCceeeEEEEEeC--CCCccccCC--ccccc----cCCCCCEEEEEEEEEC
Confidence 678899999999999999998874 256863221 12333 7999999999887664
No 20
>PF01299 Lamp: Lysosome-associated membrane glycoprotein (Lamp); InterPro: IPR002000 Lysosome-associated membrane glycoproteins (lamp) [] are integral membrane proteins, specific to lysosomes, and whose exact biological function is not yet clear. Structurally, the lamp proteins consist of two internally homologous lysosome-luminal domains separated by a proline-rich hinge region; at the C-terminal extremity there is a transmembrane region (TM) followed by a very short cytoplasmic tail (C). In each of the duplicated domains, there are two conserved disulphide bonds. This structure is schematically represented in the figure below. +-----+ +-----+ +-----+ +-----+ | | | | | | | | xCxxxxxCxxxxxxxxxxxxCxxxxxCxxxxxxxxxCxxxxxCxxxxxxxxxxxxCxxxxxCxxxxxxxx +--------------------------++Hinge++--------------------------++TM++C+ In mammals, there are two closely related types of lamp: lamp-1 and lamp-2, which form major components of the lysosome membrane. In chicken lamp-1 is known as LEP100. Also included in this entry is the macrophage protein CD68 (or macrosialin) [] is a heavily glycosylated integral membrane protein whose structure consists of a mucin-like domain followed by a proline-rich hinge; a single lamp-like domain; a transmembrane region and a short cytoplasmic tail. Similar to CD68, mammalian lamp-3, which is expressed in lymphoid organs, dendritic cells and in lung, contains all the C-terminal regions but lacks the N-terminal lamp-like region []. In a lamp-family protein from nematodes [] only the part C-terminal to the hinge is conserved. ; GO: 0016020 membrane
Probab=69.64 E-value=1.1e+02 Score=29.94 Aligned_cols=32 Identities=19% Similarity=0.368 Sum_probs=21.5
Q ss_pred eeecCCCcccCCCCCeEEEEEEeCCCCceEEEEeEEe
Q 017562 332 AYGFPSWLNNLAAGKSLEFVYIHTANAADVSVSAYTL 368 (369)
Q Consensus 332 ~~tLPs~~~~I~~G~s~~FGYI~~g~~a~l~V~~~~~ 368 (369)
.+.| +|. .|.+++|.|-.....-.+++.++.+
T Consensus 164 ~L~L-~~~----~~~~L~f~F~~~~~~~~~~L~~v~l 195 (306)
T PF01299_consen 164 TLTL-SFP----GGWNLTFTFTKNNTSNSFYLSSVSL 195 (306)
T ss_pred EEEE-eeC----CccEEEEEEEecCCCCcEEEEEEEE
Confidence 3667 332 2568889998876666777777765
No 21
>PF05753 TRAP_beta: Translocon-associated protein beta (TRAPB); InterPro: IPR008856 This family consists of several eukaryotic translocon-associated protein beta (TRAPB) or signal sequence receptor beta subunit (SSR-beta) proteins. The normal translocation of nascent polypeptides into the lumen of the endoplasmic reticulum (ER) is thought to be aided in part by a translocon-associated protein (TRAP) complex consisting of 4 protein subunits. The association of mature proteins with the ER and Golgi, or other intracellular locales, such as lysosomes, depends on the initial targeting of the nascent polypeptide to the ER membrane. A similar scenario must also exist for proteins destined for secretion [].; GO: 0005783 endoplasmic reticulum, 0016021 integral to membrane
Probab=58.77 E-value=63 Score=29.72 Aligned_cols=76 Identities=13% Similarity=0.307 Sum_probs=53.1
Q ss_pred ceEEEEeeecccccCCeEEEEEEEEEEeCCCcceeeeEEEeccCCCCccccEEcCCeeecCCCcccCCCCCeEEEEEEeC
Q 017562 276 AIAIQQKLTTSWISNGKRYYRYSTIVTNKSAKTLKNLKLSISKLYGPLWGLTNLGNAYGFPSWLNNLAAGKSLEFVYIHT 355 (369)
Q Consensus 276 ~v~i~q~v~~sW~~gg~~y~q~~VtI~N~g~~~I~~~~i~~~~l~~~iWnv~~~~n~~tLPs~~~~I~~G~s~~FGYI~~ 355 (369)
.|.++-.+.++..-.|++ ..+.++|.|.|..+..++.|.-+....+-+.+. .|. .--+| ..|+||++++.-|+.+
T Consensus 22 ~llv~K~il~~~~v~g~~-v~V~~~iyN~G~~~A~dV~l~D~~fp~~~F~lv-sG~--~s~~~-~~i~pg~~vsh~~vv~ 96 (181)
T PF05753_consen 22 RLLVSKQILNKYLVEGED-VTVTYTIYNVGSSAAYDVKLTDDSFPPEDFELV-SGS--LSASW-ERIPPGENVSHSYVVR 96 (181)
T ss_pred EEEEEEeeccccccCCcE-EEEEEEEEECCCCeEEEEEEECCCCCccccEec-cCc--eEEEE-EEECCCCeEEEEEEEe
Confidence 677777777887765433 567899999999999999996655444566542 221 11123 6899999999888865
Q ss_pred C
Q 017562 356 A 356 (369)
Q Consensus 356 g 356 (369)
.
T Consensus 97 p 97 (181)
T PF05753_consen 97 P 97 (181)
T ss_pred e
Confidence 4
No 22
>PF11611 DUF4352: Domain of unknown function (DUF4352); InterPro: IPR021652 This entry is represented by Bacteriophage A118, Gp32. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This entry represents a group of putative lipoproteins of unknown function.; PDB: 3CFU_A.
Probab=55.17 E-value=81 Score=25.76 Aligned_cols=65 Identities=14% Similarity=0.141 Sum_probs=30.1
Q ss_pred ccccc--CCeEEEEEEEEEEeCCCccee----eeEEEeccCCCCccccEEcCCeeecC--CCcccCCCCCeEEEEEE
Q 017562 285 TSWIS--NGKRYYRYSTIVTNKSAKTLK----NLKLSISKLYGPLWGLTNLGNAYGFP--SWLNNLAAGKSLEFVYI 353 (369)
Q Consensus 285 ~sW~~--gg~~y~q~~VtI~N~g~~~I~----~~~i~~~~l~~~iWnv~~~~n~~tLP--s~~~~I~~G~s~~FGYI 353 (369)
+.+.. .+..|..++|+|+|++..++. ++.|..++ -..+. .+... ...+ .....|+||++.+.-.+
T Consensus 26 ~~~~~~~~g~~fv~v~v~v~N~~~~~~~~~~~~f~l~d~~-g~~~~-~~~~~--~~~~~~~~~~~i~pG~~~~g~l~ 98 (123)
T PF11611_consen 26 NEYSKPKEGNKFVVVDVTVKNNGDEPLDFSPSDFKLYDSD-GNKYD-PDFSA--SSNDNDLFSETIKPGESVTGKLV 98 (123)
T ss_dssp S-BEES---SEEEEEEEEEEE-SSS-EEEEGGGEEEE-TT---B---EEE-C--CCTTTB--EEEE-TT-EEEEEEE
T ss_pred ccccccCCCCEEEEEEEEEEECCCCcEEecccceEEEeCC-CCEEc-ccccc--hhccccccccEECCCCEEEEEEE
Confidence 45553 468899999999999998764 23333121 01122 11111 1111 23467999998876544
No 23
>TIGR01451 B_ant_repeat conserved repeat domain. This model represents the conserved region of about 53 amino acids shared between regions, usually repeated, of proteins from a small number of phylogenetically distant prokaryotes. Examples include a 132-residue region found repeated in three of the five longest proteins of Bacillus anthracis, a 131-residue repeat in a cell wall-anchored protein of Enterococcus faecalis, and a 120-residue repeat in Methanobacterium thermoautotrophicum. A similar region is found in some Chlamydial outer membrane proteins.
Probab=54.19 E-value=21 Score=25.98 Aligned_cols=22 Identities=23% Similarity=0.311 Sum_probs=19.4
Q ss_pred EEEEEEEEEeCCCcceeeeEEE
Q 017562 294 YYRYSTIVTNKSAKTLKNLKLS 315 (369)
Q Consensus 294 y~q~~VtI~N~g~~~I~~~~i~ 315 (369)
...|.++|+|+|..+.+++.|.
T Consensus 13 ~v~Yti~v~N~g~~~a~~v~v~ 34 (53)
T TIGR01451 13 TITYTITVTNNGNVPATNVVVT 34 (53)
T ss_pred EEEEEEEEEECCCCceEeEEEE
Confidence 4789999999999999988875
No 24
>PF07705 CARDB: CARDB; InterPro: IPR011635 The APHP (acidic peptide-dependent hydrolases/peptidase) domain is found in a variety of different proteins.; PDB: 2KUT_A 2L0D_A 3IDU_A 2KL6_A.
Probab=47.36 E-value=1.3e+02 Score=23.22 Aligned_cols=52 Identities=15% Similarity=0.182 Sum_probs=31.0
Q ss_pred EEEEEEEEeCCCcceeeeEEEeccCCCCccccEEcCCeeecCCCcccCCCCCeEEEEEEeCCC
Q 017562 295 YRYSTIVTNKSAKTLKNLKLSISKLYGPLWGLTNLGNAYGFPSWLNNLAAGKSLEFVYIHTAN 357 (369)
Q Consensus 295 ~q~~VtI~N~g~~~I~~~~i~~~~l~~~iWnv~~~~n~~tLPs~~~~I~~G~s~~FGYI~~g~ 357 (369)
.+..++|+|.|..+..++.+.+-.--..+ ....+ ..|++|++.+|-|.....
T Consensus 21 ~~i~~~V~N~G~~~~~~~~v~~~~~~~~~-------~~~~i----~~L~~g~~~~v~~~~~~~ 72 (101)
T PF07705_consen 21 VTITVTVKNNGTADAENVTVRLYLDGNSV-------STVTI----PSLAPGESETVTFTWTPP 72 (101)
T ss_dssp EEEEEEEEE-SSS-BEEEEEEEEETTEEE-------EEEEE----SEB-TTEEEEEEEEEE-S
T ss_pred EEEEEEEEECCCCCCCCEEEEEEECCcee-------ccEEE----CCcCCCcEEEEEEEEEeC
Confidence 67889999999999898888654200111 11111 568888888877775543
No 25
>PF14796 AP3B1_C: Clathrin-adaptor complex-3 beta-1 subunit C-terminal
Probab=38.88 E-value=55 Score=29.23 Aligned_cols=67 Identities=18% Similarity=0.279 Sum_probs=44.4
Q ss_pred CceEEEEeeecccccCCeEEEEEEEEEEeCCCcceeeeEEEeccCCCCccccEEcCCeeecCCCcccCCCCCeEE
Q 017562 275 GAIAIQQKLTTSWISNGKRYYRYSTIVTNKSAKTLKNLKLSISKLYGPLWGLTNLGNAYGFPSWLNNLAAGKSLE 349 (369)
Q Consensus 275 ~~v~i~q~v~~sW~~gg~~y~q~~VtI~N~g~~~I~~~~i~~~~l~~~iWnv~~~~n~~tLPs~~~~I~~G~s~~ 349 (369)
+-+.+.+....+=......+.-++++++|++..+|++|.|+-.++...+ .. ..|+- ...|+||++++
T Consensus 67 ~GL~v~Y~F~RqP~~~s~~mvsIql~ftN~s~~~i~~I~i~~k~l~~g~---~i----~~F~~-I~~L~pg~s~t 133 (145)
T PF14796_consen 67 KGLSVEYRFSRQPSLYSPSMVSIQLTFTNNSDEPIKNIHIGEKKLPAGM---RI----HEFPE-IESLEPGASVT 133 (145)
T ss_pred CceeEEEEEccCCcCCCCCcEEEEEEEEecCCCeecceEECCCCCCCCc---Ee----eccCc-ccccCCCCeEE
Confidence 4577777766644434445788999999999999999999877642211 11 12222 14688888765
No 26
>PF01345 DUF11: Domain of unknown function DUF11; InterPro: IPR001434 This group of sequences is represented by a conserved region of about 53 amino acids shared between regions, usually repeated, of proteins from a small number of phylogenetically distant prokaryotes. Examples include a 132-residue region found repeated in three of the five longest proteins of Bacillus anthracis, a 131-residue repeat in a cell wall-anchored protein of Enterococcus faecalis (Streptococcus faecalis), and a 120-residue repeat in Methanobacterium thermoautotrophicum. A similar region is found in some Chlamydia trachomatis outer membrane proteins. In C. trachomatis, three cysteine-rich proteins (also believed to be lipoproteins), MOMP, OMP6 and OMP3, make up the extracellular matrix of the outer membrane []. They are involved in the essential structural integrity of both the elementary body (EB) and recticulate body (RB) phase. They are thought to be involved in porin formation and, as these bacteria lack the peptidoglycan layer common to most Gram-negative microbes, such proteins are highly important in the pathogenicity of the organism.; GO: 0005727 extrachromosomal circular DNA
Probab=37.46 E-value=50 Score=25.20 Aligned_cols=40 Identities=20% Similarity=0.303 Sum_probs=28.3
Q ss_pred CceEEEEeeecccccCCeEEEEEEEEEEeCCCcceeeeEEE
Q 017562 275 GAIAIQQKLTTSWISNGKRYYRYSTIVTNKSAKTLKNLKLS 315 (369)
Q Consensus 275 ~~v~i~q~v~~sW~~gg~~y~q~~VtI~N~g~~~I~~~~i~ 315 (369)
..+.++.....+...=|+ -..|.++|+|.|+.+..++.|.
T Consensus 24 ~~~~~~k~~~~~~~~~Gd-~v~ytitvtN~G~~~a~nv~v~ 63 (76)
T PF01345_consen 24 PDLSITKTVNPSTANPGD-TVTYTITVTNTGPAPATNVVVT 63 (76)
T ss_pred CCEEEEEecCCCcccCCC-EEEEEEEEEECCCCeeEeEEEE
Confidence 356666555555543232 3679999999999999998774
No 27
>KOG3865 consensus Arrestin [Signal transduction mechanisms]
Probab=31.59 E-value=46 Score=33.57 Aligned_cols=43 Identities=28% Similarity=0.418 Sum_probs=31.2
Q ss_pred CceEEEEeeecccccCCeEEEEEEEEEEeCCCcceeeeEEEecc
Q 017562 275 GAIAIQQKLTTSWISNGKRYYRYSTIVTNKSAKTLKNLKLSISK 318 (369)
Q Consensus 275 ~~v~i~q~v~~sW~~gg~~y~q~~VtI~N~g~~~I~~~~i~~~~ 318 (369)
..+.++-++...--..|. -.-++|.|+|+++++||.|++-+..
T Consensus 193 ~~lhLevsLDkEiYyHGE-~isvnV~V~NNsnKtVKkIK~~V~Q 235 (402)
T KOG3865|consen 193 GPLHLEVSLDKEIYYHGE-PISVNVHVTNNSNKTVKKIKISVRQ 235 (402)
T ss_pred CceEEEEEecchheecCC-ceeEEEEEecCCcceeeeeEEEeEe
Confidence 466666666444443332 2678999999999999999997764
No 28
>PF01690 PLRV_ORF5: Potato leaf roll virus readthrough protein; InterPro: IPR002929 This family consists mainly of the Potato leafroll virus (PLrV) read through protein otherwise known as the minor capsid protein. This is generated via a readthrough of open reading frame 3, the coat protein, allowing transcription of open reading frame 5 to give an extended coat protein with a large C-terminal addition or read through domain []. The read through protein is essential for the circulative aphid transmission of PLrV [] and Beet western yellows virus []. The N-terminal region of the luteovirus readthrough domain determines virus binding to Buchnera GroEL and is essential for virus persistence in the aphid [].; GO: 0019028 viral capsid
Probab=28.87 E-value=2.1e+02 Score=30.31 Aligned_cols=24 Identities=21% Similarity=0.437 Sum_probs=12.9
Q ss_pred EeCCCcceeeeEEEeccCCCCccccEE
Q 017562 302 TNKSAKTLKNLKLSISKLYGPLWGLTN 328 (369)
Q Consensus 302 ~N~g~~~I~~~~i~~~~l~~~iWnv~~ 328 (369)
.|+..+.|--+.|=+.+ --|.|+.
T Consensus 82 snn~~~A~p~f~~Pvp~---G~~sV~i 105 (465)
T PF01690_consen 82 SNNSVKAIPMFVFPVPK---GKWSVEI 105 (465)
T ss_pred ecCcceeeeEEEEecCC---ceEEEEE
Confidence 36666666666664442 2455543
No 29
>COG2967 ApaG Uncharacterized protein affecting Mg2+/Co2+ transport [Inorganic ion transport and metabolism]
Probab=26.80 E-value=1.3e+02 Score=26.20 Aligned_cols=50 Identities=18% Similarity=0.350 Sum_probs=30.4
Q ss_pred CeEEEEEEEEEEeCCCcceeeeEEEeccCCCCccccEE--------cCCeeecCCCcccCCCCCeEEE
Q 017562 291 GKRYYRYSTIVTNKSAKTLKNLKLSISKLYGPLWGLTN--------LGNAYGFPSWLNNLAAGKSLEF 350 (369)
Q Consensus 291 g~~y~q~~VtI~N~g~~~I~~~~i~~~~l~~~iWnv~~--------~~n~~tLPs~~~~I~~G~s~~F 350 (369)
+.--+-|.|+|.|+|..+++=+ +..|-|+- .|.+ .--=|+-|+||++|.+
T Consensus 26 ~RyvfaYtitI~N~g~~~vqLl--------sR~W~ITd~~g~v~eV~G~G--VVGeQP~l~PG~~y~Y 83 (126)
T COG2967 26 ERYVFAYTVTIRNLGEVPVQLL--------SRYWLITDGNGRVTEVEGEG--VVGEQPLLAPGEEYQY 83 (126)
T ss_pred ceEEEEEEEEEecCCCccceee--------eeEEEEecCCCcEEEEEcCc--eeccccccCCCCceEE
Confidence 4445789999999999887633 23343321 1211 1123456999998875
No 30
>COG1470 Predicted membrane protein [Function unknown]
Probab=26.03 E-value=1e+02 Score=32.81 Aligned_cols=51 Identities=16% Similarity=0.233 Sum_probs=37.1
Q ss_pred EEEEEEEEeCCCcceeeeEEEeccCCCCccccEEcCCeeecCCCcccCCCCCeEEEEEE
Q 017562 295 YRYSTIVTNKSAKTLKNLKLSISKLYGPLWGLTNLGNAYGFPSWLNNLAAGKSLEFVYI 353 (369)
Q Consensus 295 ~q~~VtI~N~g~~~I~~~~i~~~~l~~~iWnv~~~~n~~tLPs~~~~I~~G~s~~FGYI 353 (369)
....+.|.|.|+-++++|+|.++.. +=|.++..++ +. .+|+||++-+.---
T Consensus 399 ~~i~i~I~NsGna~LtdIkl~v~~P--qgWei~Vd~~--~I----~sL~pge~~tV~lt 449 (513)
T COG1470 399 KTIRISIENSGNAPLTDIKLTVNGP--QGWEIEVDES--TI----PSLEPGESKTVSLT 449 (513)
T ss_pred ceEEEEEEecCCCccceeeEEecCC--ccceEEECcc--cc----cccCCCCcceEEEE
Confidence 3567899999999999999999873 2399876554 33 35777776655443
No 31
>PF03173 CHB_HEX: Putative carbohydrate binding domain; InterPro: IPR004866 This domain represents the N-terminal domain in chitobiases and beta-hexosaminidases 3.2.1.52 from EC. Chitobiases degrade chitin, which forms the exoskeleton in insects and crustaceans, and which is one of the most abundant polysaccharides on earth []. Beta-hexosaminidases are composed of either a HexA/HexB heterodimer or a HexB homodimer, and can hydrolyse diverse substrates, including GM(2)-gangliosides; mutations in this enzyme are associated with Tay-Sachs disease []. HexB is structurally similar to chitobiase, consisting of a beta sandwich structure; this structure is similar to that found in the cellulose-binding domain of cellulase from Cellulomonas fimi (IPR001919 from INTERPRO), suggesting that it may function as a carbohydrate-binding domain.; GO: 0030246 carbohydrate binding; PDB: 1C7T_A 1QBA_A 1QBB_A 1C7S_A.
Probab=25.48 E-value=2.7e+02 Score=25.19 Aligned_cols=71 Identities=23% Similarity=0.337 Sum_probs=35.5
Q ss_pred EEEEEEEEEEeCCCcceee--eEEEeccCCCCcc-------ccEE-cCCeee---cCCCcccCCCCCeEEEEEEeCC---
Q 017562 293 RYYRYSTIVTNKSAKTLKN--LKLSISKLYGPLW-------GLTN-LGNAYG---FPSWLNNLAAGKSLEFVYIHTA--- 356 (369)
Q Consensus 293 ~y~q~~VtI~N~g~~~I~~--~~i~~~~l~~~iW-------nv~~-~~n~~t---LPs~~~~I~~G~s~~FGYI~~g--- 356 (369)
.-+..+++++|.+..++.. |.|-+... ..|= .|+. .|+-+. -+.+ ..|+||+++++=|+.+.
T Consensus 30 ~c~~~~ltl~n~~~~~~~~~dW~IYf~~i-r~i~~~~s~~f~i~hinGDl~kl~Pt~~F-~gl~~Ges~~I~~~~~~w~~ 107 (164)
T PF03173_consen 30 SCFRAELTLTNPGDAPLPKSDWAIYFSSI-RPILQVDSDQFKITHINGDLHKLTPTAGF-KGLAPGESLEIPFVGEYWQV 107 (164)
T ss_dssp -EEEEEEEEEE-SS-B------EEEEE-S-S-EEEESSTTEEEEE-STTEEEEEE-TT----B-TTEEEEEEEEEES---
T ss_pred cceEEEEEEEcCCCccCCCCCeEEEEecc-eeeeccCCCCeEEEEEcCeEEEEeECCCC-CccCCCCEEEEEEEccccEE
Confidence 3488999999999987765 99988752 2222 2233 333333 2333 46999999999999655
Q ss_pred ---C-CceEEEEe
Q 017562 357 ---N-AADVSVSA 365 (369)
Q Consensus 357 ---~-~a~l~V~~ 365 (369)
. +++++|..
T Consensus 108 ~~tD~mp~~Yv~~ 120 (164)
T PF03173_consen 108 SETDAMPGWYVVA 120 (164)
T ss_dssp SGGGS----EEE-
T ss_pred EEccCCCceEEEe
Confidence 2 77777743
No 32
>COG3889 Predicted solute binding protein [General function prediction only]
Probab=25.44 E-value=50 Score=36.99 Aligned_cols=34 Identities=21% Similarity=0.313 Sum_probs=22.4
Q ss_pred CCChHHHHHHHHhcchhhhCCCC----CCceeEEeeCC
Q 017562 108 NVAPAELLGFAKSQVDYILGDNP----RATSYMVGYGN 141 (369)
Q Consensus 108 ~~~~~~~~~~A~~QidYiLG~Np----~~~SyvvG~G~ 141 (369)
.+++++-.+.=+.-||+|+|-.- .|.=|+.-|-.
T Consensus 644 l~Tpqea~a~y~a~vnf~n~~Gh~~is~GPf~L~aydP 681 (872)
T COG3889 644 LFTPQEAYAAYVAAVNFINGYGHAQISNGPFYLEAYDP 681 (872)
T ss_pred eeCHHHHHHHHHHHHHHHhccCceEeccCceEEEEeCc
Confidence 35677777777788888887531 25566776653
No 33
>PF14263 DUF4354: Domain of unknown function (DUF4354); PDB: 3NRF_B 3SB3_A.
Probab=25.27 E-value=3.4e+02 Score=23.71 Aligned_cols=72 Identities=19% Similarity=0.272 Sum_probs=37.9
Q ss_pred eEEEEeeecccccCCeEEE--EEEEEEEeCCCccee--eeEEEeccCCCCccccEEcCCeeecCCCcccCCCCCeEEEEE
Q 017562 277 IAIQQKLTTSWISNGKRYY--RYSTIVTNKSAKTLK--NLKLSISKLYGPLWGLTNLGNAYGFPSWLNNLAAGKSLEFVY 352 (369)
Q Consensus 277 v~i~q~v~~sW~~gg~~y~--q~~VtI~N~g~~~I~--~~~i~~~~l~~~iWnv~~~~n~~tLPs~~~~I~~G~s~~FGY 352 (369)
|--+|+..++=..+++.++ +++|.|-|.+.++|+ .+.|......+.--+++..+..++ ...|.||++.+ |.
T Consensus 29 V~At~~~~Gs~sv~~k~~ytktF~V~vaN~s~~~idLsk~Cf~a~~~~gk~f~ldTVd~~L~----~g~lK~g~s~k-G~ 103 (124)
T PF14263_consen 29 VYATEKSQGSVSVGGKSFYTKTFDVTVANLSDKDIDLSKMCFKAYSPDGKEFKLDTVDEELT----SGTLKPGESVK-GI 103 (124)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEEEEEEEE-SSS-EE-TT-EEEEEETTS-EEEEEEE-GGGG-----SEE-TT-EEE-EE
T ss_pred EEEEecCCccEeecCccceEEEEEEEEecCCCCccccccchhhhccccCCEEEecccchhhh----hccccCCCcee-EE
Confidence 4556666777777776644 588999999999875 344443321233334433222222 14688898876 44
Q ss_pred E
Q 017562 353 I 353 (369)
Q Consensus 353 I 353 (369)
+
T Consensus 104 a 104 (124)
T PF14263_consen 104 A 104 (124)
T ss_dssp E
T ss_pred E
Confidence 4
No 34
>PF08626 TRAPPC9-Trs120: Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit; InterPro: IPR013935 The trafficking protein particle complex TRAPP is a multi-protein complex needed in the early stages of the secretory pathway. To date, two kinds of TRAPP complexes have been studied, TRAPPI and TRAPP II. These complexes differ in subunit composition []. TRAPP I binds vesicles derived from the endoplasmic reticulum bringing them closer to the acceptor membrane. Trs120 is a subunit specific to the TRAPP II complex [] along with Trs65p and Trs130p(TRAPPC10). It is suggested that Trs120p is required for the stability of the Trs130p subunit, suggesting that these two proteins might interact in some way []. It is likely that there is a complex function for TRAPP II in multiple pathways [].
Probab=24.45 E-value=2.3e+02 Score=33.43 Aligned_cols=65 Identities=15% Similarity=0.267 Sum_probs=42.0
Q ss_pred EEEEEEEEEEeCCCcceeeeEEEeccC-C--------------CCccccEEcCCeeecCCCc----ccCCCCCeEEEEEE
Q 017562 293 RYYRYSTIVTNKSAKTLKNLKLSISKL-Y--------------GPLWGLTNLGNAYGFPSWL----NNLAAGKSLEFVYI 353 (369)
Q Consensus 293 ~y~q~~VtI~N~g~~~I~~~~i~~~~l-~--------------~~iWnv~~~~n~~tLPs~~----~~I~~G~s~~FGYI 353 (369)
+-.++.|+++|.|..+|+.+.|.+.+. . ..+..++. .-..+|... ..|+||++.+|-+-
T Consensus 799 E~~~~~ItL~N~S~~pvd~l~~sf~DS~~~~~~~~l~~k~l~~~e~yelE~--~l~~~~~~~i~~~~~I~Pg~~~~~~~~ 876 (1185)
T PF08626_consen 799 EKQTFTITLRNTSSVPVDFLSFSFQDSTIEPLQKALSNKDLSPDELYELEW--QLFKLPAFRILNKPPIPPGESATFTVE 876 (1185)
T ss_pred cEEEEEEEEEECCccccceEEEEEEeccHHHHhhhhhcccCChhhhhhhhh--hhhcCcceeecccCccCCCCEEEEEEE
Confidence 347899999999999999999987621 1 01111111 002233211 28999999999998
Q ss_pred eCCCCc
Q 017562 354 HTANAA 359 (369)
Q Consensus 354 ~~g~~a 359 (369)
..+.+.
T Consensus 877 ~~~~~~ 882 (1185)
T PF08626_consen 877 VDGKPG 882 (1185)
T ss_pred ecCccc
Confidence 766544
No 35
>PF06052 3-HAO: 3-hydroxyanthranilic acid dioxygenase; InterPro: IPR010329 Members of this protein family, from both bacteria and eukaryotes, are the enzyme 3-hydroxyanthranilate 3,4-dioxygenase (1.13.11.6 from EC). It is part of the kynurenine pathway for the degradation of tryptophan and the biosynthesis of nicotinic acid [].The prokaryotic homologue is involved in the 2-nitrobenzoate degradation pathway []. The enzyme acts on the tryptophan metabolite 3-hydroxyanthranilate and produces 2-amino-3-carboxymuconate semialdehyde, which can rearrange spontaneously to quinolinic acid and feed into nicotinamide biosynthesis, or undergo further enzymatic degradation.; GO: 0000334 3-hydroxyanthranilate 3,4-dioxygenase activity, 0005506 iron ion binding, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 1ZVF_A 1YFX_A 1YFW_A 1YFY_A 1YFU_A 2QNK_A 3FE5_A.
Probab=23.55 E-value=34 Score=30.81 Aligned_cols=11 Identities=45% Similarity=0.930 Sum_probs=7.6
Q ss_pred ccceeecCCCC
Q 017562 184 LVGAVVGGPDA 194 (369)
Q Consensus 184 l~GAlVGGPd~ 194 (369)
+.=.+|||||.
T Consensus 34 f~VmvVGGPN~ 44 (151)
T PF06052_consen 34 FIVMVVGGPNQ 44 (151)
T ss_dssp EEEEEEESSB-
T ss_pred eEEEEEcCCCC
Confidence 34467999994
No 36
>PF03896 TRAP_alpha: Translocon-associated protein (TRAP), alpha subunit; InterPro: IPR005595 The alpha-subunit of the TRAP complex (TRAP alpha) is a single-spanning membrane protein of the endoplasmic reticulum (ER) which is found in proximity of nascent polypeptide chains translocating across the membrane [].; GO: 0005783 endoplasmic reticulum
Probab=23.50 E-value=2.8e+02 Score=27.44 Aligned_cols=59 Identities=15% Similarity=0.182 Sum_probs=36.8
Q ss_pred EEEEEEEEEeCCCcceeeeEEEec-cCCCCccccEEcCCeeecCCCcccCCCCCeEEEEEEeC
Q 017562 294 YYRYSTIVTNKSAKTLKNLKLSIS-KLYGPLWGLTNLGNAYGFPSWLNNLAAGKSLEFVYIHT 355 (369)
Q Consensus 294 y~q~~VtI~N~g~~~I~~~~i~~~-~l~~~iWnv~~~~n~~tLPs~~~~I~~G~s~~FGYI~~ 355 (369)
=.++-|.++|+|..++.=..|... .......-+ ..| +|--.|+..|+||+..+|-|.-.
T Consensus 100 ~~~~LvgftN~g~~~~~V~~i~aSl~~p~d~~~~--iqN-fTa~~y~~~V~pg~~aT~~YsF~ 159 (285)
T PF03896_consen 100 PVKFLVGFTNKGSEPFTVESIEASLRYPQDYSYY--IQN-FTAVRYNREVPPGEEATFPYSFT 159 (285)
T ss_pred eEEEEEEEEeCCCCCEEEEEEeeeecCccccceE--EEe-ecccccCcccCCCCeEEEEEEEe
Confidence 367889999999876654444333 111111111 112 45446778899999999999843
No 37
>COG3889 Predicted solute binding protein [General function prediction only]
Probab=22.34 E-value=45 Score=37.29 Aligned_cols=11 Identities=18% Similarity=0.178 Sum_probs=6.2
Q ss_pred CccceeecCCC
Q 017562 183 LLVGAVVGGPD 193 (369)
Q Consensus 183 vl~GAlVGGPd 193 (369)
.++|-|-+=|-
T Consensus 728 tv~~sl~~~~~ 738 (872)
T COG3889 728 TVYGSLEVFPA 738 (872)
T ss_pred eEEEEEEecCC
Confidence 45666655554
No 38
>PRK09752 adhesin; Provisional
Probab=21.14 E-value=80 Score=37.10 Aligned_cols=11 Identities=27% Similarity=0.389 Sum_probs=6.0
Q ss_pred CceEEEEeEEe
Q 017562 358 AADVSVSAYTL 368 (369)
Q Consensus 358 ~a~l~V~~~~~ 368 (369)
.++.+|..|.+
T Consensus 1053 ~a~gsVdGYSv 1063 (1250)
T PRK09752 1053 RADNQNHGYAV 1063 (1250)
T ss_pred cccceeccEee
Confidence 45555666554
Done!