Query 017562
Match_columns 369
No_of_seqs 254 out of 945
Neff 5.8
Searched_HMMs 29240
Date Mon Mar 25 16:25:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017562.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017562hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1tf4_A T. fusca endo/EXO-cellu 100.0 3.9E-52 1.3E-56 437.4 19.2 189 9-231 256-446 (605)
2 1g87_A Endocellulase 9G; endog 100.0 5.7E-52 1.9E-56 436.7 17.5 238 9-314 254-495 (614)
3 2xfg_A Endoglucanase 1; hydrol 100.0 4.1E-51 1.4E-55 418.0 11.0 190 9-231 276-465 (466)
4 1ia6_A Cellulase CEL9M; cellul 100.0 3.8E-51 1.3E-55 415.9 9.7 181 9-231 252-432 (441)
5 1ks8_A Endo-B-1,4-glucanase; c 100.0 2.6E-50 8.9E-55 408.9 8.9 184 8-228 248-431 (433)
6 2yik_A Endoglucanase; hydrolas 100.0 8.8E-50 3E-54 420.0 9.1 193 10-231 315-518 (611)
7 1ut9_A Cellulose 1,4-beta-cell 100.0 3E-46 1E-50 393.2 10.2 199 8-228 404-607 (609)
8 3gzk_A Cellulase; fold from GH 100.0 2.9E-43 9.8E-48 365.7 5.9 175 10-230 340-536 (537)
9 1clc_A Endoglucanase CELD; EC: 100.0 7.3E-41 2.5E-45 353.9 7.1 173 10-227 387-563 (639)
10 3h7l_A Endoglucanase; dehydrog 99.7 4.1E-17 1.4E-21 170.5 7.7 115 63-216 424-555 (586)
11 3icg_A Endoglucanase D; cellul 99.1 1.2E-10 4.1E-15 119.7 9.3 85 275-363 381-479 (515)
12 3ndz_E Endoglucanase D; cellot 99.0 4.7E-10 1.6E-14 93.3 8.2 84 277-364 3-100 (107)
13 1exg_A EXO-1,4-beta-D-glycanas 98.9 2.1E-09 7.2E-14 89.6 8.8 84 276-364 7-103 (110)
14 2cwr_A Chitinase; chitin-bindi 98.4 5.3E-07 1.8E-11 74.3 7.4 66 280-357 13-86 (103)
15 1e5b_A Xylanase D; hydrolase, 97.2 5.8E-05 2E-09 60.2 -0.2 65 277-356 3-73 (87)
16 1heh_C Endo-1,4-beta-xylanase 96.9 0.00029 1E-08 56.2 1.8 64 277-355 4-73 (88)
17 3ghp_A Cellulosomal scaffoldin 88.4 0.18 6.1E-06 46.0 1.9 8 132-139 118-125 (227)
18 2x3c_A Toxic extracellular end 67.4 5 0.00017 39.1 4.6 72 276-354 25-109 (343)
19 2wnx_A Glycoside hydrolase, fa 64.0 4.6 0.00016 35.5 3.3 40 275-316 11-52 (170)
20 1ufg_A Lamin A, nuclear lamin; 42.8 25 0.00086 30.2 4.4 41 299-350 52-97 (151)
21 1ifr_A Lamin A/C; immunoglobul 34.7 45 0.0015 27.5 4.6 41 299-350 21-66 (121)
22 1xvs_A Protein APAG; MCSG APC2 34.6 48 0.0017 27.6 4.7 21 290-310 25-45 (126)
23 2g30_A AP-2 complex subunit be 33.5 1.1E+02 0.0037 28.3 7.5 64 275-350 42-105 (258)
24 2f1e_A Protein APAG; APAG prot 33.3 47 0.0016 27.7 4.5 21 290-310 26-46 (127)
25 2e9g_A AP-1 complex subunit ga 33.3 1.7E+02 0.0059 24.0 8.0 42 274-317 21-62 (131)
26 2lll_A Lamin-B2; immunoglobuli 32.9 54 0.0019 27.7 4.9 56 274-350 21-81 (139)
27 3nrf_A APAG protein; structura 32.5 1.8E+02 0.0062 23.5 7.6 69 277-349 9-81 (106)
28 3cfu_A Uncharacterized lipopro 24.8 52 0.0018 28.2 3.4 62 290-355 44-111 (159)
29 3idu_A Uncharacterized protein 24.7 1.9E+02 0.0064 23.8 6.7 22 295-316 35-56 (127)
30 1suj_A CONE arrestin; sensory 22.4 1E+02 0.0034 30.5 5.3 79 275-355 192-272 (392)
31 3jt0_A Lamin-B1; structural ge 22.0 1E+02 0.0034 26.2 4.6 55 274-350 25-84 (144)
32 2xbt_A Cellulosomal scaffoldin 20.8 1.6E+02 0.0055 25.2 5.8 40 275-316 8-49 (160)
No 1
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A*
Probab=100.00 E-value=3.9e-52 Score=437.40 Aligned_cols=189 Identities=33% Similarity=0.565 Sum_probs=168.8
Q ss_pred ceeecccchhHHHHHhhhhhccCCCCCchHHHHHHHHHHHHhhhhhcCC-CCCceeeCCCcceeccCCCcHHHHHHHHHH
Q 017562 9 TEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYFMCSCLGK-GSRNVQKTPGGLIFRQRWNNMQFVTSASFL 87 (369)
Q Consensus 9 ~~fsWD~K~~gv~vLla~~~~~~~~~~~~~~~~~y~~~ae~~~c~~l~~-~~~~~~~TpgGl~~~~~Wgs~~y~an~Afl 87 (369)
.+|+||+|.+|+++||++++. + ++|++.+|.++|.++++ ++..+++||+||+|+..||++||++|.|||
T Consensus 256 ~~~~Wd~~~~g~~~lla~~~~--~--------~~y~~~a~~~~~~~~~~~~~~~~~~tp~Gl~~~~~WGs~~~~~n~a~l 325 (605)
T 1tf4_A 256 WTIAWDDKSYGTYVLLAKETG--K--------QKYIDDANRWLDYWTVGVNGQRVPYSPGGMAVLDTWGALRYAANTAFV 325 (605)
T ss_dssp SCCSSSCCHHHHHHHHHHHHC--C--------HHHHHHHHHHHHHTTTCBTTBCCCBCTTSCBCCCSSSHHHHHHHHHHH
T ss_pred ccccccchHHHHHHHHHhccC--h--------HHHHHHHHHHHHHHhcccCCCccccCCCcceecCCccHHHHHHHHHHH
Confidence 369999999999999998752 1 56999999999988754 445689999999999999999999999999
Q ss_pred HHHHHHHhhhcCCccccCCCCCChHHHHHHHHhcchhhhCCCCCCceeEEeeCCCCCCCccccccccccccCCCCccccC
Q 017562 88 ATVYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCR 167 (369)
Q Consensus 88 ~~~ya~~l~~~~~~~~c~~~~~~~~~~~~~A~~QidYiLG~Np~~~SyvvG~G~~~P~~pHHR~ss~p~~~~~p~~~~C~ 167 (369)
+++|++++... .++++|++||++|||||||+||+++|||||||+|+|+|||||+|||+
T Consensus 326 ~~~~a~~~~~~----------~~~~~y~~~A~~qidYiLG~Np~~~SyvvG~G~~~p~~pHHR~ss~~------------ 383 (605)
T 1tf4_A 326 ALVYAKVIDDP----------VRKQRYHDFAVRQINYALGDNPRNSSYVVGFGNNPPRNPHHRTAHGS------------ 383 (605)
T ss_dssp HHHHHHHCCCH----------HHHHHHHHHHHHHHHHHHTCSTTCCCSBTTSSSSCCSCCSCHHHHTC------------
T ss_pred HHHHHHhcccc----------ccHHHHHHHHHHHHHHhcCCCCCCcceEecCCCCCCCCCcccccccC------------
Confidence 99999987421 24689999999999999999999999999999999999999999974
Q ss_pred CCccccccCCCCCCCCccceeecCCCC-CCCcccccCcccccccccCCCchHHHHHHHHhhcCCC
Q 017562 168 GGYATWFSSKGSDPNLLVGAVVGGPDA-YDNFGDRRDNYEQTEPATYNNAPILGILARLNAGHGG 231 (369)
Q Consensus 168 ~G~~~~~~~~~~np~vl~GAlVGGPd~-~D~f~D~r~~y~~nEvaid~NA~~vg~lA~l~~~~~~ 231 (369)
|.++++.+.+|||+|+||||||||. +|+|.|+|.+|++|||||||||+||++||+|...+++
T Consensus 384 --~~~~~~~p~~~~~vl~GaLVGGP~~~~d~y~D~~~~y~~nEvai~~NA~lv~~lA~l~~~~~~ 446 (605)
T 1tf4_A 384 --WTDSIASPAENRHVLYGALVGGPGSPNDAYTDDRQDYVANEVATDYNAGFSSALAMLVEEYGG 446 (605)
T ss_dssp --SSSCTTSSSSCSSCCTTCBCCCCSSTTCCCCCCTTCTTTTCCCGGGGHHHHHHHHHHHHHHCC
T ss_pred --ccccccCCccCCCCCcceEEeCCCCCcccccccccchhhcCCccccchHHHHHHHHHHHhcCC
Confidence 2345677889999999999999998 9999999999999999999999999999999988764
No 2
>1g87_A Endocellulase 9G; endoglucanase, cellulose binding domain, (ALPH 6-helix barrel, beta barrel, hydrolase; 1.60A {Clostridium cellulolyticum} SCOP: a.102.1.2 b.2.2.2 PDB: 1ga2_A* 1k72_A* 1kfg_A*
Probab=100.00 E-value=5.7e-52 Score=436.70 Aligned_cols=238 Identities=29% Similarity=0.469 Sum_probs=190.7
Q ss_pred ceeecccchhHHHHHhhhhhccCCCCCchHHHHHHHHHHHHhhhhhcCC-CCCceeeCCCcceeccCCCcHHHHHHHHHH
Q 017562 9 TEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYFMCSCLGK-GSRNVQKTPGGLIFRQRWNNMQFVTSASFL 87 (369)
Q Consensus 9 ~~fsWD~K~~gv~vLla~~~~~~~~~~~~~~~~~y~~~ae~~~c~~l~~-~~~~~~~TpgGl~~~~~Wgs~~y~an~Afl 87 (369)
..|+||+|.+|+++||++++. + +.|++.++.++|.++++ .+..+.+||+||+|+..|||+||++|+|||
T Consensus 254 ~~~~Wd~~~~g~~~lla~~~~--~--------~~~~~~~~~~~~~~~~~~~~~~~~~tp~Gl~~~~~Wgs~~~~~n~afl 323 (614)
T 1g87_A 254 WGQCWDDVHYGAELLLAKLTN--K--------QLYKDSIEMNLDFWTTGVNGTRVSYTPKGLAWLFQWGSLRHATTQAFL 323 (614)
T ss_dssp SCCBTTBCHHHHHHHHHHHHC--C--------HHHHHHHHHHHHHHTTCBTTBCCEECTTSCEECCSSSHHHHHHHHHHH
T ss_pred CCcCccchHHHHHHHHHhccC--c--------HHHHHHHHHHHHHhhhccCCCccccCCCCceeccCCCcHHHHHHHHHH
Confidence 369999999999999999852 1 35778888888766644 445789999999999999999999999999
Q ss_pred HHHHHHHhhhcCCccccCCCCCChHHHHHHHHhcchhhhCCCCCCceeEEeeCCCCCCCccccccccccccCCCCccccC
Q 017562 88 ATVYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCR 167 (369)
Q Consensus 88 ~~~ya~~l~~~~~~~~c~~~~~~~~~~~~~A~~QidYiLG~Np~~~SyvvG~G~~~P~~pHHR~ss~p~~~~~p~~~~C~ 167 (369)
+++|+|++. |. ..++++|++||++|||||||+| +||||||||+|+|+|||||+||||..
T Consensus 324 ~~~y~~~~~-------~~--~~~~~~y~~~A~~qidYiLG~n--~~SyvvG~G~~~p~~pHHR~ss~~~~---------- 382 (614)
T 1g87_A 324 AGVYAEWEG-------CT--PSKVSVYKDFLKSQIDYALGST--GRSFVVGYGVNPPQHPHHRTAHGSWT---------- 382 (614)
T ss_dssp HHHHHHSTT-------SC--HHHHHHHHHHHHHHHHHHHTTT--SSCCBTTSSSSCCSCCBCHHHHTCSS----------
T ss_pred HHHHHHhhC-------CC--ccCHHHHHHHHHHHHHHhcCCC--CcceEeccCCCCCCCCcchhhccCcc----------
Confidence 999999862 42 2357899999999999999998 89999999999999999999998642
Q ss_pred CCccccccCCCCCCCCccceeecCCCCCCCcccccCcccccccccCCCchHHHHHHHHhhcCCCCCCccccccCCCCCcc
Q 017562 168 GGYATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNYEQTEPATYNNAPILGILARLNAGHGGYNQLLPVIVPAATPVV 247 (369)
Q Consensus 168 ~G~~~~~~~~~~np~vl~GAlVGGPd~~D~f~D~r~~y~~nEvaid~NA~~vg~lA~l~~~~~~~~~~~~~~~~~~~~~~ 247 (369)
.+++.+.||||+|+||||||||.+|+|.|+|.+|++|||||||||+||++||+|...+++ +.++..|
T Consensus 383 ----~~~~~p~p~~~~l~GaLVGGP~~~D~y~D~~~~y~~nEvai~~NA~lv~~lA~l~~~~~~--~~~~~~~------- 449 (614)
T 1g87_A 383 ----DQMTSPTYHRHTIYGALVGGPDNADGYTDEINNYVNNEIACDYNAGFTGALAKMYKHSGG--DPIPNFK------- 449 (614)
T ss_dssp ----SCTTSSSSCSSCCTTCBCCCCCTTSCCCCCTTCHHHHBCCHHHHHHHHHHHHHHHHHHCC--CCCTTCC-------
T ss_pred ----ccccCCCCCCCCccccEeeCCCcccCccccccchhhcCCccccchHHHHHHHHHHHhcCC--CcCCCCC-------
Confidence 246678899999999999999999999999999999999999999999999999987664 1111111
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCCCCCCCceEEEEeeecccccCCeEEEEEEEEEEeCCC-cc--eeeeEE
Q 017562 248 TKPSPAPKPKTIPPTKPKTTPAPASSSGAIAIQQKLTTSWISNGKRYYRYSTIVTNKSA-KT--LKNLKL 314 (369)
Q Consensus 248 ~~~~~t~~p~~~~~~~p~~tp~~~~~~~~v~i~q~v~~sW~~gg~~y~q~~VtI~N~g~-~~--I~~~~i 314 (369)
|.++| ....+.|+-++..+ +..+++..+.|+|++. .+ +++++|
T Consensus 450 ----------------~~~~~----~~~e~~vea~in~s----~~~~~~~~~~i~N~s~~pa~~l~~l~~ 495 (614)
T 1g87_A 450 ----------------AIEKI----TNDEVIIKAGLNST----GPNYTEIKAVVYNQTGWPARVTDKISF 495 (614)
T ss_dssp ----------------BCCCC----CSCSEEEEEEEEEE----ETTEEEEEEEEEECCCTTCCCBCSEEE
T ss_pred ----------------CCCCC----CCCceEEEEEeccC----CCCceEEEEEEEECCCCCCeecCceEE
Confidence 01111 11355555544322 2246899999999988 33 367765
No 3
>2xfg_A Endoglucanase 1; hydrolase-sugar binding protein complex, family-9 glycoside hydrolase, hydrolase, sugar binding protein; 1.68A {Clostridium thermocellum}
Probab=100.00 E-value=4.1e-51 Score=418.02 Aligned_cols=190 Identities=32% Similarity=0.533 Sum_probs=163.0
Q ss_pred ceeecccchhHHHHHhhhhhccCCCCCchHHHHHHHHHHHHhhhhhcCCCCCceeeCCCcceeccCCCcHHHHHHHHHHH
Q 017562 9 TEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYFMCSCLGKGSRNVQKTPGGLIFRQRWNNMQFVTSASFLA 88 (369)
Q Consensus 9 ~~fsWD~K~~gv~vLla~~~~~~~~~~~~~~~~~y~~~ae~~~c~~l~~~~~~~~~TpgGl~~~~~Wgs~~y~an~Afl~ 88 (369)
..|+||+|.+|+++||++++. +...| ++.++..++.|+|. ..+..+++||+||+|++.|||+||++|+|||+
T Consensus 276 ~~~~Wd~~~~g~~~lla~~~~--~~~~~---~~~~~~~~~~~~~~---~~~~~~~~tp~Gl~~~~~Wgs~~~~~n~afl~ 347 (466)
T 2xfg_A 276 WAQCWDDVTYGTYLLLARIKN--DNGKY---KEAIERHLDWWTTG---YNGERITYTPKGLAWLDQWGSLRYATTTAFLA 347 (466)
T ss_dssp SCCBTTBCHHHHHHHHHHHHC--SSCHH---HHHHHHHHHHHTTC---BTTBCCCBCTTSCBCCCSSSHHHHHHHHHHHH
T ss_pred CcCCcchhHHHHHHHHHHhcC--CcHHH---HHHHHHHHHHHHhc---cCCCccccCCccccccCCCCchHHHHHHHHHH
Confidence 369999999999999999862 22112 34455555666653 23456899999999999999999999999999
Q ss_pred HHHHHHhhhcCCccccCCCCCChHHHHHHHHhcchhhhCCCCCCceeEEeeCCCCCCCccccccccccccCCCCccccCC
Q 017562 89 TVYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCRG 168 (369)
Q Consensus 89 ~~ya~~l~~~~~~~~c~~~~~~~~~~~~~A~~QidYiLG~Np~~~SyvvG~G~~~P~~pHHR~ss~p~~~~~p~~~~C~~ 168 (369)
++|+|++. |. ..++++|++||++|||||||+| ++|||||||+|+|+|||||+||||..
T Consensus 348 ~~y~~~~~-------~~--~~~~~~y~~~A~~qidYiLG~N--~~SyvvG~G~~~p~~pHHR~ss~~~~----------- 405 (466)
T 2xfg_A 348 CVYSDWEN-------GD--KEKAKTYLEFARSQADYALGST--GRSFVVGFGENPPKRPHHRTAHGSWA----------- 405 (466)
T ss_dssp HHHHTCTT-------SC--HHHHHHHHHHHHHHHHHHHTTT--SSCCBTTSSSSCCSCCSCHHHHTCSS-----------
T ss_pred HHHHHhcC-------CC--cccHHHHHHHHHHhHHhhcCCC--CcceEeccCCCCCCCCcCchhccCcc-----------
Confidence 99999862 42 2357999999999999999999 99999999999999999999998642
Q ss_pred CccccccCCCCCCCCccceeecCCCCCCCcccccCcccccccccCCCchHHHHHHHHhhcCCC
Q 017562 169 GYATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNYEQTEPATYNNAPILGILARLNAGHGG 231 (369)
Q Consensus 169 G~~~~~~~~~~np~vl~GAlVGGPd~~D~f~D~r~~y~~nEvaid~NA~~vg~lA~l~~~~~~ 231 (369)
.+++.+.||||+|+||||||||.+|+|.|+|.+|++|||||||||+||++||+|...+|+
T Consensus 406 ---~~~~~p~p~~~vl~GaLVGGP~~~D~y~D~~~~y~~nEvaid~NA~~v~~la~l~~~~g~ 465 (466)
T 2xfg_A 406 ---DSQMEPPEHRHVLYGALVGGPDSTDNYTDDISNYTCNEVACDYNAGFVGLLAKMYKLYGE 465 (466)
T ss_dssp ---SCTTSSSSCSSCCTTCBCCCCCTTSCCCCCTTCHHHHCCCHHHHHHHHHHHHHHHHHHTC
T ss_pred ---ccccCCCCCCCCCccceeeCCCCccCcCcccccccccccchhhhHHHHHHHHHHHHHcCC
Confidence 246678899999999999999999999999999999999999999999999999987765
No 4
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A*
Probab=100.00 E-value=3.8e-51 Score=415.89 Aligned_cols=181 Identities=35% Similarity=0.552 Sum_probs=161.2
Q ss_pred ceeecccchhHHHHHhhhhhccCCCCCchHHHHHHHHHHHHhhhhhcCCCCCceeeCCCcceeccCCCcHHHHHHHHHHH
Q 017562 9 TEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYFMCSCLGKGSRNVQKTPGGLIFRQRWNNMQFVTSASFLA 88 (369)
Q Consensus 9 ~~fsWD~K~~gv~vLla~~~~~~~~~~~~~~~~~y~~~ae~~~c~~l~~~~~~~~~TpgGl~~~~~Wgs~~y~an~Afl~ 88 (369)
..|+||+|.+|+++||+++.. + +.|++.++.+++.++ ..+.+||+||+|+..||++||++|+|||+
T Consensus 252 ~~~~Wd~~~~g~~~lla~~~~--~--------~~~~~~~~~~~~~~~----~~~~~tp~Gl~~~~~WGs~~~~~~~a~l~ 317 (441)
T 1ia6_A 252 WTMCWDDMYVPAALRLAQITG--K--------QIYKDAIEFNFNYWK----TQVTTTPGGLKWLSNWGVLRYAAAESMVM 317 (441)
T ss_dssp SCSSSSCCHHHHHHHHHHHHC--C--------HHHHHHHHHHHHHHH----HTSCBCTTSCBCCCSTTHHHHHHHHHHHH
T ss_pred CcCCccchHHHHHHHHHhccC--c--------HHHHHHHHHHHHHHH----hhcccCCCCceecCCcchHHHHHHHHHHH
Confidence 469999999999999999752 1 357777777776665 34789999999999999999999999999
Q ss_pred HHHHHHhhhcCCccccCCCCCChHHHHHHHHhcchhhhCCCCCCceeEEeeCCCCCCCccccccccccccCCCCccccCC
Q 017562 89 TVYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCRG 168 (369)
Q Consensus 89 ~~ya~~l~~~~~~~~c~~~~~~~~~~~~~A~~QidYiLG~Np~~~SyvvG~G~~~P~~pHHR~ss~p~~~~~p~~~~C~~ 168 (369)
++|++++ .+++|++||++|||||||+||+++|||||||.|+|++||||+|||+..
T Consensus 318 ~~~~~~~--------------~~~~y~~~A~~qldYiLG~NP~~~SyvvG~G~~~p~~pHHR~s~~~~~----------- 372 (441)
T 1ia6_A 318 LVYCKQN--------------PDQSLLDLAKKQVDYILGDNPANMSYIIGYGSNWCIHPHHRAANGYTY----------- 372 (441)
T ss_dssp HHHHHHS--------------CCHHHHHHHHHHHHHHHTCSTTCCCSBTTSSSSCCSCCBCHHHHCCCC-----------
T ss_pred HHHHhhc--------------CHHHHHHHHHHHHHHhcCCCCCCceeEEecCCCCCCCCcChhhccCCc-----------
Confidence 9999975 467999999999999999999999999999999999999999998741
Q ss_pred CccccccCCCCCCCCccceeecCCCCCCCcccccCcccccccccCCCchHHHHHHHHhhcCCC
Q 017562 169 GYATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNYEQTEPATYNNAPILGILARLNAGHGG 231 (369)
Q Consensus 169 G~~~~~~~~~~np~vl~GAlVGGPd~~D~f~D~r~~y~~nEvaid~NA~~vg~lA~l~~~~~~ 231 (369)
.+++.+.||||+|+||||||||.+|+|.|+|.+|++|||||||||+||++||+|...+++
T Consensus 373 ---~~~~~p~p~~~~l~GalvGGP~~~d~y~D~~~~y~~nEvai~~NA~~v~~la~l~~~~~~ 432 (441)
T 1ia6_A 373 ---ANGDNAKPAKHLLTGALVGGPDQNDKFLDDANQYQYTEVALDYNAGLVGVLAGAIKFFGG 432 (441)
T ss_dssp ---C--CTTSCCSSCCTTCBCCCCCTTSCCCCSTTCHHHHBCCHHHHHHHHHHHHHHHHHTC-
T ss_pred ---cccCCCCCCcccCccceeeCCCCCcCcCcccccccccccchhhhHHHHHHHHHHHHhcCC
Confidence 256788999999999999999999999999999999999999999999999999988774
No 5
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A
Probab=100.00 E-value=2.6e-50 Score=408.91 Aligned_cols=184 Identities=34% Similarity=0.571 Sum_probs=166.1
Q ss_pred CceeecccchhHHHHHhhhhhccCCCCCchHHHHHHHHHHHHhhhhhcCCCCCceeeCCCcceeccCCCcHHHHHHHHHH
Q 017562 8 MTEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYFMCSCLGKGSRNVQKTPGGLIFRQRWNNMQFVTSASFL 87 (369)
Q Consensus 8 ~~~fsWD~K~~gv~vLla~~~~~~~~~~~~~~~~~y~~~ae~~~c~~l~~~~~~~~~TpgGl~~~~~Wgs~~y~an~Afl 87 (369)
..+|+||+|.+|+++||+++.. .++|++.++.|+|.++.. +.+||+||.|...||++||++|.|||
T Consensus 248 ~~~~~Wd~~~~g~~~lla~~~~----------~~~~~~~~~~~~~~~~~~----~~~tp~Gl~~~~~WGs~~~~~n~a~l 313 (433)
T 1ks8_A 248 GGGLNWDSKVSGVQVLLAKLTN----------KQAYKDTVQSYVNYLINN----QQKTPKGLLYIDMWGTLRHAANAAFI 313 (433)
T ss_dssp CCCCCSSCCHHHHHHHHHHHHC----------CHHHHHHHHHHHHHHHHT----SCBCTTSCBCCCSTTHHHHHHHHHHH
T ss_pred cCCcCccchhhHHHHHHhhccC----------hHHHHHHHHHHHHHHHhc----CCcCCCCceeecCCchhHHHHHHHHH
Confidence 3579999999999999998852 156888899999988743 67899999999999999999999999
Q ss_pred HHHHHHHhhhcCCccccCCCCCChHHHHHHHHhcchhhhCCCCCCceeEEeeCCCCCCCccccccccccccCCCCccccC
Q 017562 88 ATVYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCR 167 (369)
Q Consensus 88 ~~~ya~~l~~~~~~~~c~~~~~~~~~~~~~A~~QidYiLG~Np~~~SyvvG~G~~~P~~pHHR~ss~p~~~~~p~~~~C~ 167 (369)
+++|+++. .++.+|++||++|||||||+| ++|||||||.|+|++||||+||||..+ .+|.
T Consensus 314 ~~~~~~~~-------------~~~~~y~~~A~~qldYiLG~n--~~SyvvG~G~~~p~~pHHR~s~~~~~~-----~~c~ 373 (433)
T 1ks8_A 314 MLEAAELG-------------LSASSYRQFAQTQIDYALGDG--GRSFVCGFGSNPPTRPHHRSSSCPPAP-----ATCD 373 (433)
T ss_dssp HHHHHHTT-------------SSHHHHHHHHHHHHHHHHTTT--SSCCBTTSSSSCCSCCSCHHHHCCCTT-----SCCS
T ss_pred HHHHHhcC-------------CCHHHHHHHHHHhHhhccCCC--CcceEeccCCCCCCCCcchhhcCCCcc-----cccc
Confidence 99999871 267899999999999999998 899999999999999999999998642 3797
Q ss_pred CCccccccCCCCCCCCccceeecCCCCCCCcccccCcccccccccCCCchHHHHHHHHhhc
Q 017562 168 GGYATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNYEQTEPATYNNAPILGILARLNAG 228 (369)
Q Consensus 168 ~G~~~~~~~~~~np~vl~GAlVGGPd~~D~f~D~r~~y~~nEvaid~NA~~vg~lA~l~~~ 228 (369)
+| +++++.||||+|+||||||||.+|+|.|+|.+|++|||||||||+||++||+|...
T Consensus 374 ~~---~~~~~~pn~~~l~GalvGGP~~~d~y~D~~~~y~~nEvai~~NA~~v~~la~l~~~ 431 (433)
T 1ks8_A 374 WN---TFNSPDPNYHVLSGALVGGPDQNDNYVDDRSDYVHNEVATDYNAGFQSALAALVAL 431 (433)
T ss_dssp HH---HHTCSSCCSSCCTTCBCCCCCTTSCCCCCTTCHHHHCCCHHHHHHHHHHHHHHHHT
T ss_pred cc---ccCCCCCCCCCCccceecCCCcccCcCcCccccccccccHHhHHHHHHHHHHHHhc
Confidence 65 58899999999999999999999999999999999999999999999999999854
No 6
>2yik_A Endoglucanase; hydrolase; 2.10A {Clostridium thermocellum}
Probab=100.00 E-value=8.8e-50 Score=419.97 Aligned_cols=193 Identities=31% Similarity=0.491 Sum_probs=165.2
Q ss_pred eeecccchhHHHHHhhhhhccCCCCCchHHHHHHHHHHHHh----------hhhhcCC-CCCceeeCCCcceeccCCCcH
Q 017562 10 EFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYF----------MCSCLGK-GSRNVQKTPGGLIFRQRWNNM 78 (369)
Q Consensus 10 ~fsWD~K~~gv~vLla~~~~~~~~~~~~~~~~~y~~~ae~~----------~c~~l~~-~~~~~~~TpgGl~~~~~Wgs~ 78 (369)
.|+||+|.+|+++||+++...... .-....+.|++.++.+ +|.++++ .+..+++||+||+|+..||++
T Consensus 315 ~~~Wd~~~~g~~~lLa~~~~~~~~-~~~~~~~~y~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~tp~Gl~~~~~WGs~ 393 (611)
T 2yik_A 315 IHCWNDVWSGTACILAEINDLYDK-DSQNFEDRYKRASNKNQWEQIDFWKPIQDLLDKWSGGGITVTPGGYVFLNQWGSA 393 (611)
T ss_dssp CSBTTBCHHHHHHHHHHHHHHHST-TSSHHHHHHHHHTTCCTTSCCCTTHHHHHHHHHHHTTSSCBCTTSCBCSCSTTHH
T ss_pred cCccccchHHHHHHHHhccccccc-cccchhHHHHHHHHHHHHHHHHHHHHHHHhccCCCCceeccCCccccccCCCchH
Confidence 599999999999999998631100 0112346788887764 3444433 335689999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCccccCCCCCChHHHHHHHHhcchhhhCCCCCCceeEEeeCCCCCCCcccccccccccc
Q 017562 79 QFVTSASFLATVYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIK 158 (369)
Q Consensus 79 ~y~an~Afl~~~ya~~l~~~~~~~~c~~~~~~~~~~~~~A~~QidYiLG~Np~~~SyvvG~G~~~P~~pHHR~ss~p~~~ 158 (369)
||++|+|||+++|++++. ..+++|++||++|||||||+||+++|||||||+|+|+|||||+|+||.
T Consensus 394 ~~~~~~afl~~~ya~~~~------------~~~~~y~~~A~~qidYiLG~NP~~~SyvvG~G~~~p~~pHHR~a~~~~-- 459 (611)
T 2yik_A 394 RYNTAAQLIALVYDKHHG------------DTPSKYANWARSQMDYLLGKNPLNRCYVVGYSSNSVKYPHHRAASGLK-- 459 (611)
T ss_dssp HHHHHHHHHHHHHHHTTT------------SSCCHHHHHHHHHHHHHTTCSTTCCBSBTTSSTTBCCCCBCHHHHCCS--
T ss_pred HHHHHHHHHHHHHHHhcC------------ccHHHHHHHHHHhHHhhcCCCCCCcceEeccCCCCCCCCcchhhcCcc--
Confidence 999999999999999863 246899999999999999999999999999999999999999999873
Q ss_pred CCCCccccCCCccccccCCCCCCCCccceeecCCCCCCCcccccCcccccccccCCCchHHHHHHHHhhcCCC
Q 017562 159 VNPSFVSCRGGYATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNYEQTEPATYNNAPILGILARLNAGHGG 231 (369)
Q Consensus 159 ~~p~~~~C~~G~~~~~~~~~~np~vl~GAlVGGPd~~D~f~D~r~~y~~nEvaid~NA~~vg~lA~l~~~~~~ 231 (369)
+++.+.||||+|+||||||||.+|+|.|+|.+|++|||||||||+||++||+|...+++
T Consensus 460 --------------~~~~p~p~~~vl~GaLVGGPd~~d~y~D~~~~y~~nEvai~~NA~lv~~la~l~~~~~~ 518 (611)
T 2yik_A 460 --------------DANDSSPHKYVLYGALVGGPDASDQHVDRTNDYIYNEVAIDYNAAFVGACAGLYRFFGD 518 (611)
T ss_dssp --------------CTTCCSCCSSCCTTCBCSCCCTTSCCCCCTTCTTTTBCCHHHHHHHHHHHHHHHHHHCC
T ss_pred --------------cccCCCCCCCCCCceeecCCCcccCcCCCCcceeeccceecCccHHHHHHHHHHHhcCC
Confidence 25668899999999999999999999999999999999999999999999999988765
No 7
>1ut9_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase, family 9, cellobiohydrolase; 2.1A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 PDB: 1rq5_A*
Probab=100.00 E-value=3e-46 Score=393.17 Aligned_cols=199 Identities=21% Similarity=0.235 Sum_probs=164.9
Q ss_pred CceeecccchhHHHHHhhhhhccCCCCCchHHHHHHHHHHHHhhhhhcCCC----CCceeeCCCcceeccCCCcHHHHHH
Q 017562 8 MTEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYFMCSCLGKG----SRNVQKTPGGLIFRQRWNNMQFVTS 83 (369)
Q Consensus 8 ~~~fsWD~K~~gv~vLla~~~~~~~~~~~~~~~~~y~~~ae~~~c~~l~~~----~~~~~~TpgGl~~~~~Wgs~~y~an 83 (369)
..+|+||+|.+++++||+++............++.|++.||.|+|.+...+ .....+||+|| .|||+||++|
T Consensus 404 ~~~f~Wd~~~~~~~~lla~~~~~l~~~~~~~~~~~~~~~ad~~~~~~~~~~~g~~~~~~~~t~gg~----~WGs~~~~~n 479 (609)
T 1ut9_A 404 WGCFTWGTTQGLGTITLALVENGLPATDIQKARNNIAKAADRWLENIEEQGYRLPIKQAEDERGGY----PWGSNSFILN 479 (609)
T ss_dssp BSSCCSSCCHHHHHHHHHHSCCSSCHHHHHHHHHHHHHHHHHHHHHHHTCTTCCSCCCCSSSSCSC----CTTHHHHHHH
T ss_pred ccccchhhhHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHhhccCCCCccccccccCCCCc----ccccCHHHHH
Confidence 457999999999999999763210100123446778899999999876542 22356789998 7999999999
Q ss_pred HHHHHHHHHHHhhhcCCccccCCCCCChHHHHHHHHhcchhhhCCCCCCceeEEeeCCCCCCCccccccccccccCCC-C
Q 017562 84 ASFLATVYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVNP-S 162 (369)
Q Consensus 84 ~Afl~~~ya~~l~~~~~~~~c~~~~~~~~~~~~~A~~QidYiLG~Np~~~SyvvG~G~~~P~~pHHR~ss~p~~~~~p-~ 162 (369)
.||++++++++. ...+|++||++|||||||+||++||||||||+|+|+|||||+++.+.....| .
T Consensus 480 ~a~~~~~a~~~~--------------~~~~y~~~A~~qidYiLG~NP~~~SyVvG~G~~~p~~pHHR~~s~~~~~~~~~~ 545 (609)
T 1ut9_A 480 QMIVMGYAYDFT--------------GDSKYLDGMFDGISYLLGRNAMDQSYVTGYGERPLQNPHDRFWTPQTSKRFPAP 545 (609)
T ss_dssp HHHHHHHHHHHH--------------CCTHHHHHHHHHHHHHBTCSTTCCBCBBTCSSSCBCCCBCSSSCTTTCTTSCCC
T ss_pred HHHHHHHHHHhc--------------ChHHHHHHHHHHHHhccCCCCCCceEEEecCCCCCCCCccccccccccccCCCC
Confidence 999999888764 4589999999999999999999999999999999999999987765433222 3
Q ss_pred ccccCCCccccccCCCCCCCCccceeecCCCCCCCcccccCcccccccccCCCchHHHHHHHHhhc
Q 017562 163 FVSCRGGYATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNYEQTEPATYNNAPILGILARLNAG 228 (369)
Q Consensus 163 ~~~C~~G~~~~~~~~~~np~vl~GAlVGGPd~~D~f~D~r~~y~~nEvaid~NA~~vg~lA~l~~~ 228 (369)
+.+|..|. .++..+||++ .|||||||+.+|+|.|+|++|++|||||||||+||++||+|.+.
T Consensus 546 ~~G~l~Gg---p~~~~~dp~~-~ga~vggp~~~d~y~D~r~~y~~nEvaid~NA~lv~~lA~l~~~ 607 (609)
T 1ut9_A 546 PPGIISGG---PNSRFEDPTI-NAAVKKDTPPQKCFIDHTDSWSTNEITVNWNAPFAWVTAYLDQY 607 (609)
T ss_dssp CSSCBCCC---CCTTCCSHHH-HHHSCTTCCGGGCCCCCTTCHHHHBCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCC---CCCCCCCccc-ccccCCCCccccCcCccccccccccceecchHHHHHHHHHHHhh
Confidence 47998774 5667789988 99999999999999999999999999999999999999999753
No 8
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A*
Probab=100.00 E-value=2.9e-43 Score=365.68 Aligned_cols=175 Identities=22% Similarity=0.336 Sum_probs=144.4
Q ss_pred eeecccchhHHHH--HhhhhhccCCCCCchHHHHHHHHHHHHhhhhhcCCCCCceeeCCCcceecc---CCCcHHHHHHH
Q 017562 10 EFGWDVKYPGVQT--LVAKFLMQGKAGHYAPVFERYQQKAEYFMCSCLGKGSRNVQKTPGGLIFRQ---RWNNMQFVTSA 84 (369)
Q Consensus 10 ~fsWD~K~~gv~v--Lla~~~~~~~~~~~~~~~~~y~~~ae~~~c~~l~~~~~~~~~TpgGl~~~~---~Wgs~~y~an~ 84 (369)
+|+||+|.+++++ ||+++... ........++.|++.+|.| |..+ ..||+|+.+.. .|||+++++|.
T Consensus 340 ~~~Wd~~~~~~~~~ll~~~~~~~-~~~~~~~~~~~~~~~ad~~-~~~~-------~~~~~g~~~~~~~~~WGsn~~~~n~ 410 (537)
T 3gzk_A 340 ELGWADVALYGVMDYLRTPRAAV-SDDVRNKVKSRLLRELDAL-AAMA-------ESHPFGIPMRDDDFIWGSNMVLLNR 410 (537)
T ss_dssp CCSSSCCHHHHHHHHHTSCGGGS-CHHHHHHHHHHHHHHHHHH-HHHH-------HHSTTCCSCCGGGCCTTHHHHHHHH
T ss_pred ccchHHhHHHHHHHHHhCccccC-CHHHHHHHHHHHHHHHHHH-HHhc-------cCCCCceeecCCCCcccchHHHHHH
Confidence 6999999988764 66765421 1112344567788888887 4443 45777776654 89999999999
Q ss_pred HHHHHHHHHHhhhcCCccccCCCCCChHHHHHHH-HhcchhhhCCCCCCceeEEeeCCCCCCCccccccccccccCCCCc
Q 017562 85 SFLATVYSDYLASAGRDLKCSAGNVAPAELLGFA-KSQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSF 163 (369)
Q Consensus 85 Afl~~~ya~~l~~~~~~~~c~~~~~~~~~~~~~A-~~QidYiLG~Np~~~SyvvG~G~~~P~~pHHR~ss~p~~~~~p~~ 163 (369)
||++++++++. ...+|+++| ++|||||||+||+++|||||||+|+|+|||||.|+++.
T Consensus 411 a~~l~~a~~~~--------------~~~~y~~~aa~~qidYiLG~NP~~~SyVvG~G~~~p~~pHHR~s~~~~------- 469 (537)
T 3gzk_A 411 AMAFLLAEGVG--------------VLHPAAHTVAQRAADYLFGANPLGQCYVTGFGQRPVRHPHHRPSVADD------- 469 (537)
T ss_dssp HHHHHHHGGGT--------------CCCTTHHHHHHHHHHHHBTCSTTCCBCBBTCSSSCBCSCBCHHHHHHC-------
T ss_pred HHHHHHHhhcc--------------CCHHHHHHHHHHhHHHhcCCCCCCceeEecCCCCCCCCCcchhhhcCC-------
Confidence 99999888752 346799999 99999999999999999999999999999999987642
Q ss_pred cccCCCccccccCCCCCCCCccceeecCCCCC----------------CCcccccCcccccccccCCCchHHHHHHHHhh
Q 017562 164 VSCRGGYATWFSSKGSDPNLLVGAVVGGPDAY----------------DNFGDRRDNYEQTEPATYNNAPILGILARLNA 227 (369)
Q Consensus 164 ~~C~~G~~~~~~~~~~np~vl~GAlVGGPd~~----------------D~f~D~r~~y~~nEvaid~NA~~vg~lA~l~~ 227 (369)
+|++|+||||||||.+ |+|.|+|.+|++|||||||||+||++||+|..
T Consensus 470 ----------------~~~p~~GalVGGPn~~~~D~~~~~~~~~~~~~d~y~D~~~~y~~nEvai~~NA~lv~~lA~l~~ 533 (537)
T 3gzk_A 470 ----------------VDHPVPGMVVGGPNRHLQDEIARAQLAGRPAMEAYIDHQDSYSTNEVAVYWNSPAVFVIAALLE 533 (537)
T ss_dssp ----------------TTSCCTTCBCCCCCTTCCSHHHHHHCTTCCGGGCCCCCTTCHHHHBCCHHHHHHHHHHHHHHHS
T ss_pred ----------------CCCCCCCCCccCCCcccccchhhhcccCCCcccCcCCCCccccccccchHHHHHHHHHHHHHHH
Confidence 3567999999999986 89999999999999999999999999999987
Q ss_pred cCC
Q 017562 228 GHG 230 (369)
Q Consensus 228 ~~~ 230 (369)
..|
T Consensus 534 ~~g 536 (537)
T 3gzk_A 534 ARG 536 (537)
T ss_dssp CCC
T ss_pred hcC
Confidence 654
No 9
>1clc_A Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycosyl hydrolase; 1.90A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2
Probab=100.00 E-value=7.3e-41 Score=353.86 Aligned_cols=173 Identities=20% Similarity=0.199 Sum_probs=142.8
Q ss_pred eeecccchhHHHHHhh-hhhccCCCCCchHHHHHHHHHHHHhhhhhcCCCCCceeeCCCcce--eccCCCcHHHHHHHHH
Q 017562 10 EFGWDVKYPGVQTLVA-KFLMQGKAGHYAPVFERYQQKAEYFMCSCLGKGSRNVQKTPGGLI--FRQRWNNMQFVTSASF 86 (369)
Q Consensus 10 ~fsWD~K~~gv~vLla-~~~~~~~~~~~~~~~~~y~~~ae~~~c~~l~~~~~~~~~TpgGl~--~~~~Wgs~~y~an~Af 86 (369)
.|+||+|.+++++||+ +.............++.|++.+|.|+|.. .+||+|+. +...||+++|++|.||
T Consensus 387 ~f~Wd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~--------~~~~~g~~~~~~~~WGsn~~~~~~a~ 458 (639)
T 1clc_A 387 DFDWDNVANLGMFTYLLSERPGKNPALVQSIKDSLLSTADSIVRTS--------QNHGYGRTLGTTYYWGCNGTVVRQTM 458 (639)
T ss_dssp SCCTTCCHHHHHHHHHHCCCSCCCHHHHHHHHHHHHHHHHHHHHHH--------HTSTTCCTTTTCCCTTHHHHHHHTHH
T ss_pred CCCchhhHHHHHHHHHhhhhhccChHHHHHHHHHHHHHHHHHHHhc--------cCCCCCcccCCCCCCchHHHHHHHHH
Confidence 3599999999999988 32111111112345677888899998753 45677766 3689999999999999
Q ss_pred HHHHHHHHhhhcCCccccCCCCCChHHHHHHHHhcchhhhCCCCCCceeEEeeCCCCCCCccccccccccccCCCCcccc
Q 017562 87 LATVYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSC 166 (369)
Q Consensus 87 l~~~ya~~l~~~~~~~~c~~~~~~~~~~~~~A~~QidYiLG~Np~~~SyvvG~G~~~P~~pHHR~ss~p~~~~~p~~~~C 166 (369)
+++++.++. ++.+|++||++|||||||+||+++|||||||.|+|+|||||.++++
T Consensus 459 ~~~~a~~l~--------------~~~~~~~~A~~qidYiLG~NP~~~SyvvG~G~~~p~~pHHR~s~~~----------- 513 (639)
T 1clc_A 459 ILQVANKIS--------------PNNDYVNAALDAISHVFGRNYYNRSYVTGLGINPPMNPHDRRSGAD----------- 513 (639)
T ss_dssp HHHHHHHHS--------------CCHHHHHHHHHHHHHHHTCSTTCCCSBTTSSSSCCSSCBCHHHHHS-----------
T ss_pred HHHHHHhcC--------------CHHHHHHHHHHHHhhccCCCCCCceEEEecCCCCCCCCcchhhccC-----------
Confidence 998876542 4689999999999999999999999999999999999999977642
Q ss_pred CCCccccccCCCCCCCCccceeecCCCC-CCCcccccCcccccccccCCCchHHHHHHHHhh
Q 017562 167 RGGYATWFSSKGSDPNLLVGAVVGGPDA-YDNFGDRRDNYEQTEPATYNNAPILGILARLNA 227 (369)
Q Consensus 167 ~~G~~~~~~~~~~np~vl~GAlVGGPd~-~D~f~D~r~~y~~nEvaid~NA~~vg~lA~l~~ 227 (369)
| .|++|+||||||||. +|+|.|+|.+|++|||+|||||+|+++||+|..
T Consensus 514 --~----------~~~~~~GalVGGP~~~~d~y~D~r~~y~~nE~~~~~nA~~v~~la~~~~ 563 (639)
T 1clc_A 514 --G----------IWEPWPGYLVGGGWPGPKDWVDIQDSYQTNEIAINWNAALIYALAGFVN 563 (639)
T ss_dssp --S----------CSSCCSSCBCCCCCSSTTCCCCCTTCTTTSBCCHHHHHHHHHHHHTTTT
T ss_pred --C----------CCCCCCeeeecCCCccccccccCcccceeccccccchHHHHHHHHHhhh
Confidence 1 135699999999999 999999999999999999999999999998864
No 10
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus}
Probab=99.67 E-value=4.1e-17 Score=170.47 Aligned_cols=115 Identities=22% Similarity=0.256 Sum_probs=85.2
Q ss_pred eeCCCcceec----cCC-CcHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCChHHHHHHHHhcchhhhCCCCCCceeEE
Q 017562 63 QKTPGGLIFR----QRW-NNMQFVTSASFLATVYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGDNPRATSYMV 137 (369)
Q Consensus 63 ~~TpgGl~~~----~~W-gs~~y~an~Afl~~~ya~~l~~~~~~~~c~~~~~~~~~~~~~A~~QidYiLG~Np~~~Syvv 137 (369)
.+++.++.+. ..| |++++++|.||+++++++++... ....+|+++|++|||||||+||+++||||
T Consensus 424 ~~~~y~~p~~~~~~y~WqGsN~~~an~a~~~~~a~~~~~~~----------~~~~~y~~~a~~qldyiLG~Np~~~s~v~ 493 (586)
T 3h7l_A 424 KRDAFFVAHNNESGYWWQGENARLGSLATMAYLAQPHIASQ----------EIQQQLSVFAQDALNWIVGLNPYDMCMLD 493 (586)
T ss_dssp CEEESSCCSSSTTSSCCCCCHHHHHHHHHHHHHSGGGCCCH----------HHHHHHHHHHHHHHHHHBTCSTTCCBCBT
T ss_pred cccccccccCCCCCCeeeChHHHHHHHHHHHHHHHHhcCCc----------hhHHHHHHHHHHhhhhhccCCCCCCccEE
Confidence 4455555443 369 99999999999999999876210 02489999999999999999999999999
Q ss_pred eeCCCCCCCccccccccccccCCCCccccCCCccccccCCCCCCCCccceeecCCCCC--C----------CcccccCcc
Q 017562 138 GYGNNYPQRVHHRASSIVSIKVNPSFVSCRGGYATWFSSKGSDPNLLVGAVVGGPDAY--D----------NFGDRRDNY 205 (369)
Q Consensus 138 G~G~~~P~~pHHR~ss~p~~~~~p~~~~C~~G~~~~~~~~~~np~vl~GAlVGGPd~~--D----------~f~D~r~~y 205 (369)
|||.|+|+ ||.+. +| +| ++|.|||||+.. | ...|.-.||
T Consensus 494 G~G~~~p~---~r~~~---------------~~--------~~---~pG~i~gG~~~g~~D~~~ia~~~~~~~~~~~~~w 544 (586)
T 3h7l_A 494 GHGRNNPD---YLPQY---------------GF--------FN---AKGGVCNGITGGFEDEEDIAFNPPAQKDDMLQNW 544 (586)
T ss_dssp TSSSCCCC---SBGGG---------------TB--------CC---CTTCBBCCCEECSSCTTSEESSCTTTTTCTTTTH
T ss_pred eeCCCCCc---cCccc---------------CC--------CC---CCccccCCCCCCcCChhhHhcCccccccccccCc
Confidence 99999887 77542 11 22 799999999742 2 223555577
Q ss_pred cccccccCCCc
Q 017562 206 EQTEPATYNNA 216 (369)
Q Consensus 206 ~~nEvaid~NA 216 (369)
.-+|--|=--|
T Consensus 545 rw~eqw~ph~~ 555 (586)
T 3h7l_A 545 RWGEQWIPHGA 555 (586)
T ss_dssp HHHCBBHHHHH
T ss_pred ccHhhccchHH
Confidence 77777665333
No 11
>3icg_A Endoglucanase D; cellulase, xylanase, carbohydrate binding DOM glucanase, carbohydrate metabolism, cellulose degradation, glycosidase; HET: BTB; 2.10A {Clostridium cellulovorans}
Probab=99.11 E-value=1.2e-10 Score=119.74 Aligned_cols=85 Identities=16% Similarity=0.294 Sum_probs=69.9
Q ss_pred CceEEEEeeecccccCCeEEEEEEEEEEeCCCcceeeeEEEecc----CCCCccccEE--cCCe--eecCCCcccCCC-C
Q 017562 275 GAIAIQQKLTTSWISNGKRYYRYSTIVTNKSAKTLKNLKLSISK----LYGPLWGLTN--LGNA--YGFPSWLNNLAA-G 345 (369)
Q Consensus 275 ~~v~i~q~v~~sW~~gg~~y~q~~VtI~N~g~~~I~~~~i~~~~----l~~~iWnv~~--~~n~--~tLPs~~~~I~~-G 345 (369)
..|+++.+++++|..| +|.+|+|+|+|..+|.+|++.++- .+.++||.+. .++. ++.++|+.+|+| |
T Consensus 381 ~~~~~~~~~~~~W~~g----~~~~v~v~n~~~~~~~~W~~~~~~~~~~~i~~~wn~~~~~~g~~~~~~~~~~n~~~~~~g 456 (515)
T 3icg_A 381 SAVEVTYAITNSWGSG----ASVNVTIKNNGTTPINGWTLKWTMPINQTITNMWSASFVASGTTLSVTNAGYNGTIAANG 456 (515)
T ss_dssp CCEEEEEEEEEECSSE----EEEEEEEEECSSSCEESCEEEEECCTTEEEEEEESEEEEEETTEEEEEECSTTCEECTTT
T ss_pred CceEEEEEEecCCCCc----cEEEEEEEeCCCCCcCCeEEEEEeCCCCEeeccccceEEecCCeEEEecCccccccCCCC
Confidence 3588888899999888 999999999999999999999883 2568999964 5565 557999999999 9
Q ss_pred CeEEEEEEeCC-----CCceEEE
Q 017562 346 KSLEFVYIHTA-----NAADVSV 363 (369)
Q Consensus 346 ~s~~FGYI~~g-----~~a~l~V 363 (369)
+|.+|||+... .|..++|
T Consensus 457 ~s~~~gf~~~~~g~~~~p~~~~l 479 (515)
T 3icg_A 457 GTQSFGFNINYSGVLSKPTGFTV 479 (515)
T ss_dssp EEEEEEEEEEECSSCCCCSCCEE
T ss_pred ceEEEEEEEeCCCCCCCCceEEE
Confidence 99999999642 1555554
No 12
>3ndz_E Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_E*
Probab=99.04 E-value=4.7e-10 Score=93.26 Aligned_cols=84 Identities=15% Similarity=0.274 Sum_probs=69.1
Q ss_pred eEEEEeeecccccCCeEEEEEEEEEEeCCCcceeeeEEEeccC----CCCccccEE--cCCe--eecCCCcccCCC-CCe
Q 017562 277 IAIQQKLTTSWISNGKRYYRYSTIVTNKSAKTLKNLKLSISKL----YGPLWGLTN--LGNA--YGFPSWLNNLAA-GKS 347 (369)
Q Consensus 277 v~i~q~v~~sW~~gg~~y~q~~VtI~N~g~~~I~~~~i~~~~l----~~~iWnv~~--~~n~--~tLPs~~~~I~~-G~s 347 (369)
|++++++.++|..| +|.+|+|+|++..+|.+|.|.++-. +.++||.+. .++. ++.++|+..|+| |++
T Consensus 3 c~v~y~v~~~W~~G----f~~~vtVtN~g~~~i~gWtv~~~~p~g~~it~~Wna~~s~sG~~vt~~n~~wN~~la~~G~s 78 (107)
T 3ndz_E 3 VEVTYAITNSWGSG----ASVNVTIKNNGTTPINGWTLKWTMPINQTITNMWSASFVASGTTLSVTNAGYNGTIAANGGT 78 (107)
T ss_dssp EEEEEEEEEECSSE----EEEEEEEEECSSSCEESCEEEEECCTTEEEEEEESEEEEEETTEEEEEECSTTCEECTTTEE
T ss_pred cEEEEEEcccCCCC----EEEEEEEEeCCCCcccCcEEEEEcCCCCEEecccceEEEecCCEEEEEECCcccccCCCCcc
Confidence 67788889999887 9999999999999999999998832 567999964 5565 456999999999 999
Q ss_pred EEEEEEeCC--C---CceEEEE
Q 017562 348 LEFVYIHTA--N---AADVSVS 364 (369)
Q Consensus 348 ~~FGYI~~g--~---~a~l~V~ 364 (369)
.+|||+... . |..+.|.
T Consensus 79 ~~fGf~g~~~G~~~~P~~~~ln 100 (107)
T 3ndz_E 79 QSFGFNINYSGVLSKPTGFTVN 100 (107)
T ss_dssp EEEEEEEEECSSCCCCSCCEET
T ss_pred EEEEEEEeCCCCCCCCcEEEEC
Confidence 999999663 2 5555553
No 13
>1exg_A EXO-1,4-beta-D-glycanase; cellulose binding domain, cellulose degradation; NMR {Cellulomonas fimi} SCOP: b.2.2.1 PDB: 1exh_A
Probab=98.95 E-value=2.1e-09 Score=89.58 Aligned_cols=84 Identities=18% Similarity=0.311 Sum_probs=68.4
Q ss_pred ceEEEEeeecccccCCeEEEEEEEEEEeCCCcceeeeEEEeccC----CCCccccEE--cCCe--eecCCCcccCCCCCe
Q 017562 276 AIAIQQKLTTSWISNGKRYYRYSTIVTNKSAKTLKNLKLSISKL----YGPLWGLTN--LGNA--YGFPSWLNNLAAGKS 347 (369)
Q Consensus 276 ~v~i~q~v~~sW~~gg~~y~q~~VtI~N~g~~~I~~~~i~~~~l----~~~iWnv~~--~~n~--~tLPs~~~~I~~G~s 347 (369)
.|+++++ +++|..+ +|.+|+|+|++..+|++|.|.++.. +.++||.+. .++. ++.++|+..|++|++
T Consensus 7 ~c~v~y~-~~~W~~G----f~~~vtVtN~g~~~i~gWtv~~~~~~g~~i~~~Wna~~s~sG~~vt~~n~~wN~~la~G~s 81 (110)
T 1exg_A 7 GCQVLWG-VNQWNTG----FTANVTVKNTSSAPVDGWTLTFSFPSGQQVTQAWSSTVTQSGSAVTVRNAPWNGSIPAGGT 81 (110)
T ss_dssp CEEEECC-EEESSSE----EEEEEEEEECSSSCEESEEEEEECSSSCEEEEEESSEEEEETTEEEEEECSGGGEECSSEE
T ss_pred cEEEEEE-eCCCCCC----EEEEEEEEeCCCCcccceEEEEEcCCCcEEecccceEEEccCCEEEEecccccceeCCCcE
Confidence 4666666 8999888 9999999999999999999999832 567999864 5554 679999999999999
Q ss_pred EEEEEEeCC----C-CceEEEE
Q 017562 348 LEFVYIHTA----N-AADVSVS 364 (369)
Q Consensus 348 ~~FGYI~~g----~-~a~l~V~ 364 (369)
.+|||+... + |..+.|.
T Consensus 82 ~~fGf~~~~~g~~~~Pt~~~ln 103 (110)
T 1exg_A 82 AQFGFNGSHTGTNAAPTAFSLN 103 (110)
T ss_dssp EEEEEEEECSSSCCCCSCEEET
T ss_pred EEEEEEEeCCCCCCCCceEEEc
Confidence 999999653 2 5666654
No 14
>2cwr_A Chitinase; chitin-binding domain, endoglucanase, hyperthermophilic, hydrolase; 1.70A {Pyrococcus furiosus} PDB: 2czn_A
Probab=98.41 E-value=5.3e-07 Score=74.32 Aligned_cols=66 Identities=17% Similarity=0.356 Sum_probs=53.0
Q ss_pred EEeeecccccCCeEEEEEEEEEEeCCCcceeeeEEEecc----CCCCccccEE--cCCe--eecCCCcccCCCCCeEEEE
Q 017562 280 QQKLTTSWISNGKRYYRYSTIVTNKSAKTLKNLKLSISK----LYGPLWGLTN--LGNA--YGFPSWLNNLAAGKSLEFV 351 (369)
Q Consensus 280 ~q~v~~sW~~gg~~y~q~~VtI~N~g~~~I~~~~i~~~~----l~~~iWnv~~--~~n~--~tLPs~~~~I~~G~s~~FG 351 (369)
+++ +++|..+ +|.+|+|+|++. ++|.|.++. .+.++||.+. .++. ++.++|+. |++.+||
T Consensus 13 ~y~-~n~W~~G----f~~~vtVtN~g~---~gWtv~~~~~~g~~it~~Wna~~s~sg~~vt~~n~~wN~----G~s~sfG 80 (103)
T 2cwr_A 13 EVK-VNDWGSG----AEYDVTLNLDGQ---YDWTVKVKLAPGATVGSFWSANKQEGNGYVIFTPVSWNK----GPTATFG 80 (103)
T ss_dssp EEE-EEECSSE----EEEEEEEEESSC---CCCEEEEEECTTCEEEEEESEEEEEETTEEEEEECTTCC----SSEEEEE
T ss_pred EEE-ECCCCCc----eEEEEEEeCCCC---CcEEEEEECCCCcEEecccceEEecCCCEEEEEcCCcCC----CceeEEE
Confidence 444 7999888 899999999964 899998883 2567999964 4454 67999997 9999999
Q ss_pred EEeCCC
Q 017562 352 YIHTAN 357 (369)
Q Consensus 352 YI~~g~ 357 (369)
|+..+.
T Consensus 81 f~gs~~ 86 (103)
T 2cwr_A 81 FIVNGP 86 (103)
T ss_dssp EEEECS
T ss_pred EEEecC
Confidence 997654
No 15
>1e5b_A Xylanase D; hydrolase, xylan binding domain, beta-sheet; NMR {Cellulomonas fimi} SCOP: b.2.2.1 PDB: 1e5c_A 1xbd_A 2xbd_A
Probab=97.15 E-value=5.8e-05 Score=60.21 Aligned_cols=65 Identities=9% Similarity=0.192 Sum_probs=49.3
Q ss_pred eEEEEeeecccccCCeEEEEEEEEEEeCCCcceeeeEEEecc----CCCCccccEE--cCCeeecCCCcccCCCCCeEEE
Q 017562 277 IAIQQKLTTSWISNGKRYYRYSTIVTNKSAKTLKNLKLSISK----LYGPLWGLTN--LGNAYGFPSWLNNLAAGKSLEF 350 (369)
Q Consensus 277 v~i~q~v~~sW~~gg~~y~q~~VtI~N~g~~~I~~~~i~~~~----l~~~iWnv~~--~~n~~tLPs~~~~I~~G~s~~F 350 (369)
|++++++.++|..| +|.+|+|+| +++|.+.++. .+.+.||.+. .++.++.= ++|++.+|
T Consensus 3 cta~y~v~~~W~~G----f~~~vtVtn-----~~gWtv~~~~~~g~~i~~~Wn~~~s~sg~~vt~~------n~G~s~sf 67 (87)
T 1e5b_A 3 CSVTATRAEEWSDG----FNVTYSVSG-----SSAWTVNLALNGSQTIQASWNANVTGSGSTRTVT------PNGSGNTF 67 (87)
T ss_dssp CCCBCCBCCCCSSE----EEEEEBCCS-----CSSCCCEEECCTTCCEEEEESBCCEESSSCEECC------BCSSCSSE
T ss_pred eEEEEEECccCCCC----EEEEEEEEc-----cCceEEEEEcCCCCEEeeeeceeEecCCCEEEEE------CCCceeEE
Confidence 45566778999888 999999997 5889888873 2567999853 55555542 28999999
Q ss_pred EEEeCC
Q 017562 351 VYIHTA 356 (369)
Q Consensus 351 GYI~~g 356 (369)
||+...
T Consensus 68 Gf~g~~ 73 (87)
T 1e5b_A 68 GVTVMK 73 (87)
T ss_dssp EEEEEC
T ss_pred EEEEec
Confidence 999653
No 16
>1heh_C Endo-1,4-beta-xylanase D; hydrolase(xylan degradation), hydrolase, xylan binding domain, beta-sheet; NMR {Cellulomonas fimi} SCOP: b.2.2.1 PDB: 1hej_C
Probab=96.90 E-value=0.00029 Score=56.22 Aligned_cols=64 Identities=8% Similarity=0.127 Sum_probs=49.5
Q ss_pred eEEEEeeecccccCCeEEEEEEEEEEeCCCcceeeeEEEecc----CCCCccccEE--cCCeeecCCCcccCCCCCeEEE
Q 017562 277 IAIQQKLTTSWISNGKRYYRYSTIVTNKSAKTLKNLKLSISK----LYGPLWGLTN--LGNAYGFPSWLNNLAAGKSLEF 350 (369)
Q Consensus 277 v~i~q~v~~sW~~gg~~y~q~~VtI~N~g~~~I~~~~i~~~~----l~~~iWnv~~--~~n~~tLPs~~~~I~~G~s~~F 350 (369)
|++++++.++|..+ ||.+|+|+ + +++|.+.++. .+.+.||.+. .++.++.- ++|++.+|
T Consensus 4 Ctaty~~~n~W~~G----f~a~vtVt--g---~~gWtv~~~~~~gq~vt~~Wna~~s~sg~~vt~~------~~G~s~sf 68 (88)
T 1heh_C 4 CSVSAVRGEEWADR----FNVTYSVS--G---SSSWVVTLGLNGGQSVQSSWNAALTGSSGTVTAR------PNGSGNSF 68 (88)
T ss_dssp CCCCCCCCSBCSSE----EEEEEECS--S---CCSCCCEEECCSSCCCCCEESSEEECSSSEEEEE------CSSSCSEE
T ss_pred eEEEEEEcccCCCc----eEEEEEEe--c---cccEEEEEECCCCCEEEccccccCccCCCEEEEe------CCCceeEE
Confidence 45666778999888 89999998 4 2889888872 2678999975 44556553 49999999
Q ss_pred EEEeC
Q 017562 351 VYIHT 355 (369)
Q Consensus 351 GYI~~ 355 (369)
||+..
T Consensus 69 Gf~g~ 73 (88)
T 1heh_C 69 GVTFY 73 (88)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99964
No 17
>3ghp_A Cellulosomal scaffoldin adaptor protein B; linker segments, beta barrel, alpha helix, beta flaps, structural protein; 2.49A {Acetivibrio cellulolyticus}
Probab=88.36 E-value=0.18 Score=46.02 Aligned_cols=8 Identities=38% Similarity=0.642 Sum_probs=4.3
Q ss_pred CceeEEee
Q 017562 132 ATSYMVGY 139 (369)
Q Consensus 132 ~~SyvvG~ 139 (369)
|.==||||
T Consensus 118 G~iavIgF 125 (227)
T 3ghp_A 118 GTLAVVGF 125 (227)
T ss_dssp EEEEEEEE
T ss_pred ceeEEEEE
Confidence 44446666
No 18
>2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A
Probab=67.43 E-value=5 Score=39.06 Aligned_cols=72 Identities=21% Similarity=0.198 Sum_probs=41.1
Q ss_pred ceEEEEeeecccccCCeEEEEEEEEEEeCCCcceeeeEE-EeccCCCCccccEEcCCe---------eecC---CCcccC
Q 017562 276 AIAIQQKLTTSWISNGKRYYRYSTIVTNKSAKTLKNLKL-SISKLYGPLWGLTNLGNA---------YGFP---SWLNNL 342 (369)
Q Consensus 276 ~v~i~q~v~~sW~~gg~~y~q~~VtI~N~g~~~I~~~~i-~~~~l~~~iWnv~~~~n~---------~tLP---s~~~~I 342 (369)
+|++++...+ .++ .++.|+|+|+|.++++=++. -.|.+...+=.|.+.|.. +..| .+ ..|
T Consensus 25 ~v~Ls~~~~~--~~~----~~vk~tvtN~g~~~~~lLk~~~lD~~~~~~~~V~~~G~~v~f~Gi~~~~~~~~~d~f-~~L 97 (343)
T 2x3c_A 25 DAQLTLVDGS--TDD----VRVNLTLTNTGDKPIRLLKWQLPGSDDAPLFLVERDGQPVSYEGALIKRAAPTDKDF-QLL 97 (343)
T ss_dssp EEEEEECCCS--SSC----CEEEEEEEECSSSCEEEEGGGSCSSSCCCCEEEEETTEECCBCSCCCCCCCCCGGGE-EEE
T ss_pred EEEEEecccC--CCC----eEEEEEEEeCCCCceEeeccCCCCcCccceEEEEeCCcccceeeEEEeccCCChhhc-EEe
Confidence 4566654433 344 78999999999999874433 333333344444333311 2233 33 358
Q ss_pred CCCCeEEEEEEe
Q 017562 343 AAGKSLEFVYIH 354 (369)
Q Consensus 343 ~~G~s~~FGYI~ 354 (369)
+||+|++-=+=.
T Consensus 98 ~pG~Sve~~~dl 109 (343)
T 2x3c_A 98 KAGQSLTVQAEV 109 (343)
T ss_dssp CTTCEEEEEEEC
T ss_pred CCCCeEEEEEeh
Confidence 888887765543
No 19
>2wnx_A Glycoside hydrolase, family 9; cellulose degradation; 1.31A {Clostridium thermocellum} PDB: 2wo4_A 2wob_A
Probab=64.04 E-value=4.6 Score=35.47 Aligned_cols=40 Identities=15% Similarity=0.189 Sum_probs=27.6
Q ss_pred CceEEEEeeecccccCCeEEEEEEEEEEeCCCccee--eeEEEe
Q 017562 275 GAIAIQQKLTTSWISNGKRYYRYSTIVTNKSAKTLK--NLKLSI 316 (369)
Q Consensus 275 ~~v~i~q~v~~sW~~gg~~y~q~~VtI~N~g~~~I~--~~~i~~ 316 (369)
..|.|..+... ... +...++..++|+|++..+|. +++|+-
T Consensus 11 ~~l~Vqy~~~~-~~~-~~n~i~~~~~I~N~g~~~i~Ls~lkiRY 52 (170)
T 2wnx_A 11 ASISVSYKCGV-KDG-TKNTIRATINIKNTGTTPVNLSDIKVRY 52 (170)
T ss_dssp CCEEEEEEECC-CCS-SCCEEEEEEEEEECSSSCEEGGGEEEEE
T ss_pred CcEEEEEEeCC-CCC-CCCEEEEEEEEEECCCCceecCcEEEEE
Confidence 37888877633 222 23358899999999998774 777643
No 20
>1ufg_A Lamin A, nuclear lamin; immunoglobulin like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, structural protein; NMR {Mus musculus} SCOP: b.1.16.1
Probab=42.79 E-value=25 Score=30.24 Aligned_cols=41 Identities=24% Similarity=0.403 Sum_probs=27.0
Q ss_pred EEEEeCCCcceeeeEEEeccCCCCccccEE-c----CCeeecCCCcccCCCCCeEEE
Q 017562 299 TIVTNKSAKTLKNLKLSISKLYGPLWGLTN-L----GNAYGFPSWLNNLAAGKSLEF 350 (369)
Q Consensus 299 VtI~N~g~~~I~~~~i~~~~l~~~iWnv~~-~----~n~~tLPs~~~~I~~G~s~~F 350 (369)
|.|+|++.+++. + .=|-|.+ . ...|+||.-. .|.||++++.
T Consensus 52 V~L~N~s~~~~~-----L-----~GW~L~r~vdg~~~~~y~Fp~~~-~L~pg~tVtI 97 (151)
T 1ufg_A 52 VRLRNKSNEDQS-----M-----GNWQIRRQNGDDPLMTYRFPPKF-TLKAGQVVTI 97 (151)
T ss_dssp EEEEECSSSCEE-----C-----SSCEEEEEETTSCCEEEECCTTC-EECTTCEEEE
T ss_pred EEEEECCCCccc-----c-----CCCEEEEecCCCccEEEEECCCc-EECCCCEEEE
Confidence 899999887431 1 2244432 1 1359999854 5999999983
No 21
>1ifr_A Lamin A/C; immunoglobulin, immune system; 1.40A {Homo sapiens} SCOP: b.1.16.1 PDB: 1ivt_A 3gef_A
Probab=34.72 E-value=45 Score=27.47 Aligned_cols=41 Identities=27% Similarity=0.499 Sum_probs=27.3
Q ss_pred EEEEeCCCcceeeeEEEeccCCCCccccEEc-C----CeeecCCCcccCCCCCeEEE
Q 017562 299 TIVTNKSAKTLKNLKLSISKLYGPLWGLTNL-G----NAYGFPSWLNNLAAGKSLEF 350 (369)
Q Consensus 299 VtI~N~g~~~I~~~~i~~~~l~~~iWnv~~~-~----n~~tLPs~~~~I~~G~s~~F 350 (369)
|.|+|++.+++. + .=|-|.+. + ..|+||.-. .|.||++++.
T Consensus 21 V~l~N~s~~~~~-----L-----~gW~l~r~v~~~~~~~y~Fp~~~-~L~pg~~vtI 66 (121)
T 1ifr_A 21 VRLRNKSNEDQS-----M-----GNWQIKRQNGDDPLLTYRFPPKF-TLKAGQVVTI 66 (121)
T ss_dssp EEEEECSSSCEE-----C-----TTCEEEEEETTSCCEEEECCSSC-EECTTCEEEE
T ss_pred EEEEeCCCCccc-----c-----CCCEEEEEcCCCccEEEEeCCCc-EECCCCEEEE
Confidence 899999887531 1 23554331 2 359999843 5999999873
No 22
>1xvs_A Protein APAG; MCSG APC26324, midwest center for structural genomics, structure initiative, PSI, structural genomics, unknown FUN; 2.01A {Vibrio cholerae} SCOP: b.1.23.1
Probab=34.59 E-value=48 Score=27.56 Aligned_cols=21 Identities=19% Similarity=0.327 Sum_probs=17.6
Q ss_pred CCeEEEEEEEEEEeCCCccee
Q 017562 290 NGKRYYRYSTIVTNKSAKTLK 310 (369)
Q Consensus 290 gg~~y~q~~VtI~N~g~~~I~ 310 (369)
.++-++.|.|+|+|.+..+++
T Consensus 25 ~~~y~faY~I~I~N~~~~~vQ 45 (126)
T 1xvs_A 25 YQRFVFAYLITIKNLSSQTVQ 45 (126)
T ss_dssp GTBEEEEEEEEEEECSSSCEE
T ss_pred CCEEEEEEEEEEEECCCCCEE
Confidence 466789999999999987764
No 23
>2g30_A AP-2 complex subunit beta-1; alpha-helical ARH peptide, platform domain, sandwich domain, endocytosis, adaptor, endocytosis/exocytosis complex; 1.60A {Homo sapiens} SCOP: b.1.10.1 d.105.1.1 PDB: 1e42_A 3h1z_A 3hs9_A 2iv9_A 2iv8_A
Probab=33.53 E-value=1.1e+02 Score=28.34 Aligned_cols=64 Identities=16% Similarity=0.281 Sum_probs=40.8
Q ss_pred CceEEEEeeecccccCCeEEEEEEEEEEeCCCcceeeeEEEeccCCCCccccEEcCCeeecCCCcccCCCCCeEEE
Q 017562 275 GAIAIQQKLTTSWISNGKRYYRYSTIVTNKSAKTLKNLKLSISKLYGPLWGLTNLGNAYGFPSWLNNLAAGKSLEF 350 (369)
Q Consensus 275 ~~v~i~q~v~~sW~~gg~~y~q~~VtI~N~g~~~I~~~~i~~~~l~~~iWnv~~~~n~~tLPs~~~~I~~G~s~~F 350 (369)
.-+.|+-....+ +|+ ..++++++|++..+|+++.|.+.+ ..-|+.-... ..+| ..|+||+|.+.
T Consensus 42 ~GLeI~g~f~r~---~g~--i~l~l~~~N~s~~~is~faIQfNk---NsFGL~p~~~-~~~~---~~L~pgqs~~v 105 (258)
T 2g30_A 42 KGLEISGTFTHR---QGH--IYMEMNFTNKALQHMTDFAIQFNK---NSFGVIPSTP-LAIH---TPLMPNQSIDV 105 (258)
T ss_dssp TTEEEEEEEEEE---TTE--EEEEEEEEECSSSCBCCCEEEECC---BTTCCEESSC-CCCC---SCBCTTCEEEE
T ss_pred CcEEEEEEEEEe---CCE--EEEEEEEecCCccceeeeEEEEcc---cccCcccCcc-ccCC---CccCCCCcEEE
Confidence 346666433222 344 668899999999999999999985 3334433211 2222 34899987764
No 24
>2f1e_A Protein APAG; APAG protein, xanthomonas axonopodis PV.citri, structural genomics, unknown function; NMR {Xanthomonas axonopodis PV}
Probab=33.35 E-value=47 Score=27.65 Aligned_cols=21 Identities=24% Similarity=0.428 Sum_probs=17.6
Q ss_pred CCeEEEEEEEEEEeCCCccee
Q 017562 290 NGKRYYRYSTIVTNKSAKTLK 310 (369)
Q Consensus 290 gg~~y~q~~VtI~N~g~~~I~ 310 (369)
.++-++.|.|+|+|.+..+++
T Consensus 26 ~~~y~faY~I~I~N~~~~~vQ 46 (127)
T 2f1e_A 26 EGRYAFAYSIRIQNAGAVPAR 46 (127)
T ss_dssp GTBEEEEEEEEEEECSSSCEE
T ss_pred CCEEEEEEEEEEEeCCCCCEE
Confidence 356789999999999988764
No 25
>2e9g_A AP-1 complex subunit gamma-2; beta-sandwich, immunoglobulin-like fold, adaptin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=33.28 E-value=1.7e+02 Score=23.96 Aligned_cols=42 Identities=7% Similarity=0.005 Sum_probs=31.3
Q ss_pred CCceEEEEeeecccccCCeEEEEEEEEEEeCCCcceeeeEEEec
Q 017562 274 SGAIAIQQKLTTSWISNGKRYYRYSTIVTNKSAKTLKNLKLSIS 317 (369)
Q Consensus 274 ~~~v~i~q~v~~sW~~gg~~y~q~~VtI~N~g~~~I~~~~i~~~ 317 (369)
.+.|.|+-.......+.+. ....++++|++..+|+++.|...
T Consensus 21 ~~~l~I~f~~~~~~~~~~~--~~i~~~~~N~s~~~it~f~fQaA 62 (131)
T 2e9g_A 21 REGVQLNLSFIRPPENPAL--LLITITATNFSEGDVTHFICQAA 62 (131)
T ss_dssp CSSEEEEEEEECCSSCTTE--EEEEEEEEECSSSCEEEEEEEEE
T ss_pred cCCEEEEEEEEcCCCCCCe--EEEEEEEEECCCCccccEEEEEE
Confidence 3568887776655544333 57788999999999999999776
No 26
>2lll_A Lamin-B2; immunoglobulin-like fold, structural protein, NESG, northeas structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=32.90 E-value=54 Score=27.72 Aligned_cols=56 Identities=23% Similarity=0.410 Sum_probs=34.5
Q ss_pred CCceEEEEeeecccccCCeEEEEEEEEEEeCCCcceeeeEEEeccCCCCccccEE-cC----CeeecCCCcccCCCCCeE
Q 017562 274 SGAIAIQQKLTTSWISNGKRYYRYSTIVTNKSAKTLKNLKLSISKLYGPLWGLTN-LG----NAYGFPSWLNNLAAGKSL 348 (369)
Q Consensus 274 ~~~v~i~q~v~~sW~~gg~~y~q~~VtI~N~g~~~I~~~~i~~~~l~~~iWnv~~-~~----n~~tLPs~~~~I~~G~s~ 348 (369)
..+|+|.-.- .+| .| |.|+|++.+++. + .=|-|.+ .+ ..|+||.-. .|+||+++
T Consensus 21 kG~V~I~E~d----~~G-----ef-V~L~N~s~~~~~-----L-----~GW~L~r~v~g~~~~~y~Fp~~~-~L~pg~~V 79 (139)
T 2lll_A 21 SGSVSIEEID----LEG-----KF-VQLKNNSDKDQS-----L-----GNWRIKRQVLEGEEIAYKFTPKY-ILRAGQMV 79 (139)
T ss_dssp TTSEEEEEEC----SSC-----SE-EEEEECSSSCEE-----C-----SSCEEEEEETTSCEEEEECCTTC-EECTTCEE
T ss_pred CCCEEEEEEC----CCC-----CE-EEEEECCCCccc-----c-----CCCEEEEecCCCccEEEEECCCc-EECCCCEE
Confidence 4578887321 123 23 899999977541 1 2344433 22 349999853 59999998
Q ss_pred EE
Q 017562 349 EF 350 (369)
Q Consensus 349 ~F 350 (369)
+.
T Consensus 80 tI 81 (139)
T 2lll_A 80 TV 81 (139)
T ss_dssp EE
T ss_pred EE
Confidence 83
No 27
>3nrf_A APAG protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; 1.50A {Pseudomonas aeruginosa} PDB: 3sb3_A
Probab=32.50 E-value=1.8e+02 Score=23.53 Aligned_cols=69 Identities=17% Similarity=0.215 Sum_probs=44.5
Q ss_pred eEEEEeeecccccCCeEEEE--EEEEEEeCCCccee--eeEEEeccCCCCccccEEcCCeeecCCCcccCCCCCeEE
Q 017562 277 IAIQQKLTTSWISNGKRYYR--YSTIVTNKSAKTLK--NLKLSISKLYGPLWGLTNLGNAYGFPSWLNNLAAGKSLE 349 (369)
Q Consensus 277 v~i~q~v~~sW~~gg~~y~q--~~VtI~N~g~~~I~--~~~i~~~~l~~~iWnv~~~~n~~tLPs~~~~I~~G~s~~ 349 (369)
|--+|+..++=..+++.+|+ ++|.|-|.+.++|. ...|..-...+.--.++..+..++ ...|.||++.+
T Consensus 9 V~At~k~~GS~s~~~k~~ytktFdV~vaNl~~~~idLsk~C~~a~~~~gkef~ldTVde~L~----~g~lk~g~~vk 81 (106)
T 3nrf_A 9 VFARQGDKGSVSVGDKHFRTQAFKVRLVNAAKSEISLKNSCLVAQSAAGQSFRLDTVDEELT----ADTLKPGASVE 81 (106)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEEEEEEECCSSSCEECTTCEEEEEETTSCEEEEEEECGGGG----CSEECTTCEEE
T ss_pred EEeeccccccEEeCCeeEEEEEEEEEEecCCCCccccchhhheeeCcCCCEEEecccchhhh----hccccCCCcee
Confidence 55577778888888877554 78899999999775 444443322234444444333343 35799998875
No 28
>3cfu_A Uncharacterized lipoprotein YJHA; YJHA_bacsu, SR562, NESG, structural genomics, PSI-2, protein structure initiative; 2.40A {Bacillus subtilis}
Probab=24.83 E-value=52 Score=28.18 Aligned_cols=62 Identities=10% Similarity=-0.010 Sum_probs=34.2
Q ss_pred CCeEEEEEEEEEEeCCCccee----eeEEEeccCCCCccccEEcCCeeec-CCCc-ccCCCCCeEEEEEEeC
Q 017562 290 NGKRYYRYSTIVTNKSAKTLK----NLKLSISKLYGPLWGLTNLGNAYGF-PSWL-NNLAAGKSLEFVYIHT 355 (369)
Q Consensus 290 gg~~y~q~~VtI~N~g~~~I~----~~~i~~~~l~~~iWnv~~~~n~~tL-Ps~~-~~I~~G~s~~FGYI~~ 355 (369)
.|..|..++|+|+|+|..++. ++.|.-.+ +..-..+... ..- .... ..|+||.+.+.-.+-.
T Consensus 44 ~G~~fviV~VTIeN~g~e~~~~s~~~F~L~d~d--G~~~~~~~~~--~~~~~~l~~g~L~pG~kvtG~ivFe 111 (159)
T 3cfu_A 44 DDEERLIIEVTMENIGEDSISYNFIGFDLRDKN--DQSVRPVFSI--EEKGRILMGGTLVSGKKVTGVLSYV 111 (159)
T ss_dssp CCSEEEEEEEEEEECSSSCEEEEGGGEEEECTT--CCBCCCEECS--TTTTTBCCEEEECTTCEEEEEEEEE
T ss_pred CCCEEEEEEEEEEECCCCceeeCcccEEEEeCC--CCEEeceeee--cccCCcccccccCCCCEEEEEEEEE
Confidence 467899999999999988664 12222111 1111111100 000 1121 5799999998766533
No 29
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=24.74 E-value=1.9e+02 Score=23.76 Aligned_cols=22 Identities=18% Similarity=0.238 Sum_probs=19.1
Q ss_pred EEEEEEEEeCCCcceeeeEEEe
Q 017562 295 YRYSTIVTNKSAKTLKNLKLSI 316 (369)
Q Consensus 295 ~q~~VtI~N~g~~~I~~~~i~~ 316 (369)
..+.|+|+|.|..+..++.+.+
T Consensus 35 ~ti~vtV~N~G~~~a~~~~V~l 56 (127)
T 3idu_A 35 AEYEVHVKNLGGIGVPSTKVRV 56 (127)
T ss_dssp EEEEEEEEECSSSCEEEEEEEE
T ss_pred EEEEEEEEECCCCccCCcEEEE
Confidence 6789999999999999887754
No 30
>1suj_A CONE arrestin; sensory transduction, signaling protein; 2.38A {Ambystoma tigrinum}
Probab=22.44 E-value=1e+02 Score=30.50 Aligned_cols=79 Identities=15% Similarity=0.231 Sum_probs=47.4
Q ss_pred CceEEEEeeecccccCCeEEEEEEEEEEeCCCcceeeeEEEeccCCC-CccccEEcCCee-ecCCCcccCCCCCeEEEEE
Q 017562 275 GAIAIQQKLTTSWISNGKRYYRYSTIVTNKSAKTLKNLKLSISKLYG-PLWGLTNLGNAY-GFPSWLNNLAAGKSLEFVY 352 (369)
Q Consensus 275 ~~v~i~q~v~~sW~~gg~~y~q~~VtI~N~g~~~I~~~~i~~~~l~~-~iWnv~~~~n~~-tLPs~~~~I~~G~s~~FGY 352 (369)
.+|.++-++..+.-.-|+. ..+.|.|.|+++++|+.|.+.+.+... .+-.-.+....+ .+- -...|.||++..+-|
T Consensus 192 Gpl~l~vsLdK~~Y~pGE~-I~V~v~I~N~Ssk~Vk~Ikv~L~Q~~~v~l~s~~~~k~~Va~~e-~~e~V~pgst~~k~~ 269 (392)
T 1suj_A 192 RPLHLEASLDKEIYYHGEP-INVNVKINNTTGKIVKKIKIIVEQVTDVVLFSLDKYVKTVCAEE-TNDTVAANSTLSKTF 269 (392)
T ss_dssp EEEEEEEEESCSEEETTCC-EEEEEEEEECSSSEEEEEEEEEEEEEEECSSSCCEEEEEEEEEE-CCCCBCTTEEEEEEE
T ss_pred CCEEEEEEeCCccccCCCE-EEEEEEEECCCCCcEeEEEEEEEEEEEEEEecCCcEEEEEEEEe-cCCCcCCCCEEEEEE
Confidence 5677777776666543332 589999999999999999987764100 000000000001 110 113689999999888
Q ss_pred EeC
Q 017562 353 IHT 355 (369)
Q Consensus 353 I~~ 355 (369)
+..
T Consensus 270 ~L~ 272 (392)
T 1suj_A 270 SVT 272 (392)
T ss_dssp EEC
T ss_pred EEe
Confidence 854
No 31
>3jt0_A Lamin-B1; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, HR5546A, LMNB1_human; 2.39A {Homo sapiens}
Probab=21.95 E-value=1e+02 Score=26.19 Aligned_cols=55 Identities=20% Similarity=0.448 Sum_probs=33.5
Q ss_pred CCceEEEEeeecccccCCeEEEEEEEEEEeCCCcce--eeeEEEeccCCCCccccEEcCC---eeecCCCcccCCCCCeE
Q 017562 274 SGAIAIQQKLTTSWISNGKRYYRYSTIVTNKSAKTL--KNLKLSISKLYGPLWGLTNLGN---AYGFPSWLNNLAAGKSL 348 (369)
Q Consensus 274 ~~~v~i~q~v~~sW~~gg~~y~q~~VtI~N~g~~~I--~~~~i~~~~l~~~iWnv~~~~n---~~tLPs~~~~I~~G~s~ 348 (369)
..+|+|.-.- -+| .| |.|+|++.+++ .+|.|.- +.++ .|+||+-. .|+||+++
T Consensus 25 kG~V~I~Evd-----~~G----kf-V~L~N~s~~~~~LgGW~L~r-----------~v~g~~~~y~FP~~~-~L~pg~~V 82 (144)
T 3jt0_A 25 TGNVCIEEID-----VDG----KF-IRLKNTSEQDQPMGGWEMIR-----------KIGDTSVSYKYTSRY-VLKAGQTV 82 (144)
T ss_dssp CCCEEEEEEC-----TTS----SE-EEEEECSSSCEECTTCEEEE-----------EETTEEEEEECCTTC-EECTTCEE
T ss_pred CCCEEEEEEC-----CCC----CE-EEEEECCCCceecCCcEEEE-----------EeCCCceEEEcCCCc-EECCCCEE
Confidence 4578887421 122 24 88999997643 3444421 1221 39998654 69999999
Q ss_pred EE
Q 017562 349 EF 350 (369)
Q Consensus 349 ~F 350 (369)
+.
T Consensus 83 tV 84 (144)
T 3jt0_A 83 TI 84 (144)
T ss_dssp EE
T ss_pred EE
Confidence 85
No 32
>2xbt_A Cellulosomal scaffoldin; sugar binding protein; 1.83A {Bacteroides cellulosolvens}
Probab=20.84 E-value=1.6e+02 Score=25.18 Aligned_cols=40 Identities=5% Similarity=0.059 Sum_probs=26.7
Q ss_pred CceEEEEeeecccccCCeEEEEEEEEEEeCCCccee--eeEEEe
Q 017562 275 GAIAIQQKLTTSWISNGKRYYRYSTIVTNKSAKTLK--NLKLSI 316 (369)
Q Consensus 275 ~~v~i~q~v~~sW~~gg~~y~q~~VtI~N~g~~~I~--~~~i~~ 316 (369)
..|.|..+. +....+ ...++..+.|+|++..+|. +++|+-
T Consensus 8 ~~l~V~y~~-~~~~~~-~n~i~~~~~I~N~g~~~i~Ls~lkiRY 49 (160)
T 2xbt_A 8 SDLKLLFSN-NGAAAS-SNQIYMNMKLQNTGSSTYDLSKITIRY 49 (160)
T ss_dssp CSEEEEEEC-TTCCSE-ESSEEEEEEEEECSSCCEEGGGEEEEE
T ss_pred CeEEEEEEe-CCCCCC-CCEEEEEEEEEECCCCceecCcEEEEE
Confidence 478888775 322211 2238899999999998774 777643
Done!